Repository: lgmgeo/AnnotSV
Branch: master
Commit: 64faaf546e03
Files: 279
Total size: 8.7 MB

Directory structure:
gitextract_mvkn4kk8/

├── .gitignore
├── License.txt
├── Makefile
├── README.md
├── Scoring_Criteria_AnnotSV_v3.4.xlsx
├── bin/
│   ├── AnnotSV
│   └── INSTALL_annotations.sh
├── changeLog.txt
├── commandLineOptions.txt
├── etc/
│   └── AnnotSV/
│       ├── application.properties
│       └── configfile
├── share/
│   ├── bash/
│   │   └── AnnotSV/
│   │       ├── checkPhenoGeniusCliInstall.sh
│   │       └── searchForAFreePortNumber.bash
│   ├── doc/
│   │   └── AnnotSV/
│   │       ├── Example/
│   │       │   ├── README.commands
│   │       │   ├── test1.annotated.tsv
│   │       │   ├── test1.annotated.variantconvert.log
│   │       │   ├── test1.annotated.vcf
│   │       │   ├── test1.bed
│   │       │   ├── test2.annotated.tsv
│   │       │   ├── test2.annotated.variantconvert.log
│   │       │   ├── test2.annotated.vcf
│   │       │   └── test2.vcf
│   │       ├── annotations.md
│   │       ├── quickstart.md
│   │       ├── ranking.md
│   │       └── webserver_overview.md
│   └── tcl/
│       └── AnnotSV/
│           ├── AnnotSV-benignsv.tcl
│           ├── AnnotSV-candidategenes.tcl
│           ├── AnnotSV-clingen.tcl
│           ├── AnnotSV-closestgenes.tcl
│           ├── AnnotSV-config.tcl
│           ├── AnnotSV-cosmic.tcl
│           ├── AnnotSV-cytoband.tcl
│           ├── AnnotSV-encodeblacklist.tcl
│           ├── AnnotSV-exac.tcl
│           ├── AnnotSV-exomiser.tcl
│           ├── AnnotSV-extann.tcl
│           ├── AnnotSV-filteredVCF.tcl
│           ├── AnnotSV-gap.tcl
│           ├── AnnotSV-gccontent.tcl
│           ├── AnnotSV-gencc.tcl
│           ├── AnnotSV-general.tcl
│           ├── AnnotSV-genes.tcl
│           ├── AnnotSV-haploinsufficiency.tcl
│           ├── AnnotSV-help.tcl
│           ├── AnnotSV-loeuf-pLI.tcl
│           ├── AnnotSV-ncbi.tcl
│           ├── AnnotSV-omim.tcl
│           ├── AnnotSV-pathogenicsnvindel.tcl
│           ├── AnnotSV-pathogenicsv.tcl
│           ├── AnnotSV-phenogenius.tcl
│           ├── AnnotSV-ranking.tcl
│           ├── AnnotSV-regulatoryelements.tcl
│           ├── AnnotSV-repeat.tcl
│           ├── AnnotSV-segdup.tcl
│           ├── AnnotSV-tad.tcl
│           ├── AnnotSV-userBED.tcl
│           ├── AnnotSV-variantconvert.tcl
│           ├── AnnotSV-vcf.tcl
│           ├── AnnotSV-write.tcl
│           ├── Scripts/
│           │   └── lift_Over_a_BED_file.tcl
│           └── tcllib/
│               ├── csv/
│               │   ├── csv.tcl
│               │   └── pkgIndex.tcl
│               ├── http/
│               │   ├── autoproxy.tcl
│               │   └── pkgIndex.tcl
│               ├── json/
│               │   ├── json.tcl
│               │   ├── json_tcl.tcl
│               │   ├── json_write.tcl
│               │   ├── jsonc.tcl
│               │   └── pkgIndex.tcl
│               └── tar/
│                   ├── pkgIndex.tcl
│                   └── tar.tcl
└── tests/
    └── AnnotSV/
        ├── README
        ├── scripts/
        │   ├── check_all_public_test_directory.sh
        │   ├── check_end_values.tcl
        │   ├── check_includeCI.tcl
        │   ├── complete_KnotAnnotSV_YAML_test.tcl
        │   └── cutWithColumnNames.tcl
        ├── test_01_configfile/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── test.bed
        ├── test_02_HG00096/
        │   ├── command_Tcl.sh
        │   ├── command_python.sh
        │   └── input/
        │       ├── HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed
        │       └── HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.vcf
        ├── test_03_CDSandTxCoverage/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── control_9deletions_FCGR3A_NM_000569.bed
        │       └── test_tcl.annotated.tsv.truth.sauv
        ├── test_04_ExternalBEDannotationFiles/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── test.bed
        │       ├── user_FtIncludedInSV.bed
        │       └── user_SVincludedInFt.bed
        ├── test_05_BEDwithoutHeader/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── test.bed
        │       └── test.withoutHeader.bed
        ├── test_06_VCFfromLumpy/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── test.DEL.DUP.vcf
        │       ├── test1.csv
        │       └── test1.vcf
        ├── test_07_RegulatoryElement/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── candidateGenesFile.txt
        │       ├── delMEF2C.bed
        │       └── delSOX9.bed
        ├── test_08_largeSV/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── test.bed
        ├── test_09_InsertionInAgene/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── test.bed
        ├── test_10_BadVCFformat/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── testTRA.vcf
        │       └── testVCFwithoutHeader.vcf
        ├── test_11_RamTracking/
        │   ├── README
        │   ├── commandAnnotSV.sh
        │   └── command_Tcl.sh
        ├── test_12_SpaceSeparatedBED/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── space-separated.NA.bed
        │       ├── space-separated.bed
        │       └── tab-separated.bed
        ├── test_13_txFile/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── test.check1.bed
        │       ├── test.check2.vcf
        │       ├── txFile.check1.txt
        │       ├── txFile.check2.txt
        │       └── txFile.check3.txt
        ├── test_14_candidateGenesFile/
        │   ├── 5
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── candidateGenesFile.txt
        │       └── test.bed
        ├── test_15_EmptyVCF/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── test.vcf
        ├── test_16_reciprocalYes/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── test.bed
        │       ├── test.vcf
        │       └── user_SVincludedInFt.bed
        ├── test_17_rankFiltering/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── test.bed
        ├── test_18_VCFwithBrackets/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── INPUT_gridss_germline_output.sv.vcf
        │       └── triplesvmerge.vcf
        ├── test_19_Mouse/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── test.RE.bed
        │       └── test.bed
        ├── test_20_MitochondrialSV/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── test.bed
        ├── test_21_ExternalGeneAnnotationFile/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── configfile
        │       ├── input.bed
        │       └── user_annotations.tsv
        ├── test_22_knotAnnotSV_41SV/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── config_AnnotSV.tmp.yaml
        │       ├── test.41_SV.bed
        │       └── test.7_SV.bed
        ├── test_23_Exomiser/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── GRCh37-1SV.vcf
        │       ├── GRCh37-multiSV.vcf
        │       ├── GRCh38-1SV.vcf
        │       └── GRCh38-multiSV.vcf
        ├── test_24_HtzCompound/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── 3samples.severalSV.vcf
        │       ├── 3samples.snvindel.vcf
        │       ├── 3samples.theSV.vcf
        │       ├── 3samples.theSnvindel.vcf
        │       ├── configfile
        │       ├── test1.SV.bed
        │       ├── test1.SV.vcf
        │       ├── test1.SV.withoutGT.vcf
        │       ├── test1.snvindel.vcf
        │       └── test1.snvindel.withoutGT.vcf
        ├── test_25_big-ref-alt/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── input_1-big-ref.vcf
        ├── test_26_HtzHomCounts_deletionFiltering/
        │   ├── README
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── 3samples.SV.vcf
        │       ├── 3samples.extract-HG00096.snvindel.vcf
        │       ├── SV.bed
        │       ├── extract-HG00096.vcf
        │       └── extract-tutu.vcf
        ├── test_27_Samples_ID/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── test-withoutHeader.bed
        │       ├── test.bed
        │       └── test.vcf
        ├── test_28_SVsharingTheSameCoordinatesButWithDifferentSVTYPE/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── test.bed
        ├── test_29_distNearestSS/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── test1.vcf
        │       ├── test2.bed
        │       ├── test3.bed
        │       ├── test4.bed
        │       ├── test5.bed
        │       └── test6.bed
        ├── test_30_Ranking/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── test.bed
        ├── test_31_Cytoband/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── test.bed
        ├── test_32_metrics/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── input.bed
        ├── test_33_webSiteExample/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── test.bed
        ├── test_34_bracketedToAngularNotations/
        │   ├── README
        │   ├── Rodrigo_tests_ignore/
        │   │   ├── Difficult/
        │   │   │   ├── README
        │   │   │   ├── test.vcf
        │   │   │   └── test_difficult.vcf
        │   │   ├── Outputs/
        │   │   │   ├── command_20_square-bracketed-inv2.annotated.tsv
        │   │   │   ├── input_OnlyTheReciprocalBND_square-bracketed-tra1_1.annotated.tsv
        │   │   │   └── input_OnlyTheReciprocalBND_square-bracketed-tra1_2.annotated.tsv
        │   │   ├── README
        │   │   ├── output.csv
        │   │   ├── severalSVTYPE-square-bracketed.vcf
        │   │   ├── test_paired.vcf
        │   │   ├── tra.output.csv
        │   │   └── tra.vcf
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── input-angle-bracketed-del_1.vcf
        │       ├── input-angle-bracketed-del_partial_pass.vcf
        │       ├── input-angle-bracketed-dup.vcf
        │       ├── input-angle-bracketed-empty_del.vcf
        │       ├── input-angle-bracketed-ins_by_gridss.vcf
        │       ├── input-angle-bracketed-inv1.vcf
        │       ├── input-angle-bracketed-inv2.vcf
        │       ├── input-angle-bracketed-tra1.vcf
        │       ├── input-angle-bracketed-tra2.vcf
        │       ├── input-del_1.bed
        │       ├── input-del_partial_pass.bed
        │       ├── input-dup.bed
        │       ├── input-empty_del.bed
        │       ├── input-ins_by_gridss.bed
        │       ├── input-inv1.bed
        │       ├── input-square-bracketed-del_1.vcf
        │       ├── input-square-bracketed-del_partial_pass.vcf
        │       ├── input-square-bracketed-del_unordered.vcf
        │       ├── input-square-bracketed-dup.vcf
        │       ├── input-square-bracketed-empty_del.vcf
        │       ├── input-square-bracketed-ins_by_gridss.vcf
        │       ├── input-square-bracketed-inv1.vcf
        │       ├── input-square-bracketed-inv2.vcf
        │       ├── input-square-bracketed-inv3.vcf
        │       ├── input-square-bracketed-tra1.vcf
        │       ├── input-square-bracketed-tra2.vcf
        │       ├── input-tra1.bed
        │       ├── input_OnlyTheReciprocalBND_square-bracketed-del_1.vcf
        │       ├── input_OnlyTheReciprocalBND_square-bracketed-del_partial_pass.vcf
        │       ├── input_OnlyTheReciprocalBND_square-bracketed-del_unordered.vcf
        │       ├── input_OnlyTheReciprocalBND_square-bracketed-dup.vcf
        │       ├── input_OnlyTheReciprocalBND_square-bracketed-empty_del.vcf
        │       ├── input_OnlyTheReciprocalBND_square-bracketed-ins_by_gridss.vcf
        │       ├── input_OnlyTheReciprocalBND_square-bracketed-inv1.vcf
        │       ├── input_OnlyTheReciprocalBND_square-bracketed-inv2.vcf
        │       ├── input_OnlyTheReciprocalBND_square-bracketed-tra1_1.vcf
        │       └── input_OnlyTheReciprocalBND_square-bracketed-tra1_2.vcf
        ├── test_35_phenogenius/
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── PKD1.bed
        │       └── test.bed
        ├── test_36_chm13/
        │   ├── command_Tcl.sh
        │   └── input/
        │       └── test.bed
        ├── test_37_SVLEN/
        │   ├── README
        │   ├── command_Tcl.sh
        │   └── input/
        │       ├── input-angle-bracketed-del.vcf
        │       ├── input-angle-bracketed-dup.vcf
        │       ├── input-angle-bracketed-inv.vcf
        │       ├── input-angle-bracketed-tra.vcf
        │       ├── input-del.bed
        │       ├── input-dup.bed
        │       ├── input-ins_by_gridss.bed
        │       ├── input-inv.bed
        │       ├── input-square-bracketed-del.vcf
        │       ├── input-square-bracketed-dup.vcf
        │       ├── input-square-bracketed-ins_by_gridss.vcf
        │       ├── input-square-bracketed-inv.vcf
        │       ├── input-square-bracketed-tra.vcf
        │       └── input-tra.bed
        ├── test_38_samePosINSwithDiffInsertedSeq/
        │   ├── README
        │   ├── command_Tcl.sh
        │   ├── input/
        │   │   ├── test_INS_1.vcf
        │   │   ├── test_INS_2.vcf
        │   │   └── test_INS_3.vcf
        │   ├── test_INS_1.annotated.tsv
        │   ├── test_INS_2.annotated.tsv
        │   └── test_INS_3.annotated.tsv
        └── test_39_breakpointProximity/
            ├── command_Tcl.sh
            └── input/
                ├── A.bed
                └── B.bed

================================================
FILE CONTENTS
================================================

================================================
FILE: .gitignore
================================================
.pdm.toml                               

# tests
etc/AnnotSV/configfile.minAnnotation
etc/AnnotSV/application.properties.2007 
etc/AnnotSV/application.properties.1902

# Annotations
share/AnnotSV/Annotations_Human/        
share/AnnotSV/Annotations_Mouse/
share/AnnotSV/Annotations_Exomiser/

# Python reimplementation of AnnotSV
# + PhenoGenius install
share/python3/annotsv/
src/annotsv/
Python/
share/python3/phenogeniuscli/

# Exomiser:
# File share/AnnotSV/jar/exomiser-rest-prioritiser-14.1.0.jar is 114.75 MB; this exceeds GitHub's file size limit of 100.00 MB
# => Downloaded with the Makefile
share/AnnotSV/jar/exomiser-rest-prioritiser-14.1.0.jar

# Unit tests
tests/AnnotSV/privateTest_*
tests/AnnotSV/test_*/command_Tcl.log
tests/AnnotSV/test_*/output/
tests/AnnotSV/ToDo
tests/AnnotSV/check_all_public_test_directory.log
tests/AnnotSV/test_11_RamTracking/ramAnnotSV-*-ram.txt

# VariantConvert
share/python3/variantconvert/pipinstall.flag
share/python3/variantconvert/src/variantconvert/configs/GRCh37/annotsv3_from*local.json
share/python3/variantconvert/src/variantconvert/configs/GRCh38/annotsv3_from*local.json
share/python3/variantconvert/src/variantconvert/configs/CHM13/annotsv3_from*local.json
share/python3/variantconvert/src/variantconvert/__pycache__/
share/python3/variantconvert/src/variantconvert/__pycache__/*.pyc
share/python3/variantconvert/src/variantconvert/converters/__pycache__/
share/python3/variantconvert/src/variantconvert/converters/__pycache__/*.pyc
share/python3/variantconvert/src/variantconvert.egg-info/




================================================
FILE: License.txt
================================================
                    GNU GENERAL PUBLIC LICENSE
                       Version 3, 29 June 2007

 Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/>
 Everyone is permitted to copy and distribute verbatim copies
 of this license document, but changing it is not allowed.

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                     END OF TERMS AND CONDITIONS


================================================
FILE: Makefile
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the                                             #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################

SHELL = /usr/bin/env bash


DESTDIR              ?=
PREFIX               ?= /usr/local
INSTALLDIR1          := $(shell readlink -f "$(DESTDIR)$(PREFIX)")
INSTALLDIR2          := $(shell readlink -f "$(DESTDIR).")
BINDIR               := $(PREFIX)/bin
ETCDIR               := $(PREFIX)/etc
SHAREDIR             := $(PREFIX)/share
DOCDIR               := $(SHAREDIR)/doc
BASHDIR              := $(SHAREDIR)/bash
TESTSDIR             := $(PREFIX)/tests
TCLVERSION           := tcl$(shell echo 'puts $${tcl_version};exit 0' | tclsh)
TCLDIRDISTRIBUTED    := share/tcl
TCLDIR               := $(SHAREDIR)/$(TCLVERSION)
PYTHONDIR            := $(SHAREDIR)/python3
ANNOTSV              := AnnotSV
JARDIR               := $(SHAREDIR)/$(ANNOTSV)/jar
VERSION              := 3.5.8
HUMANVERSION         := 3.5
MOUSEVERSION         := 3.4.2
RM                   := /bin/rm
RMDIR                := /bin/rmdir
MKDIR                := install -d
MV                   := /bin/mv
CP                   := install -p -m 0644
CPDIR                := /bin/cp -r
CHMOD                := /bin/chmod -R 777
CONFIGFILE           := etc/$(ANNOTSV)/configfile
MAKEFILE             := Makefile
PROPERTIES           := etc/$(ANNOTSV)/application.properties
BASH_SCRIPTS         := $(shell find share/bash/$(ANNOTSV)/ -name '*.bash' 2> /dev/null)
DOCUMENTATIONS       := $(shell find License.txt changeLog.txt commandLineOptions.txt README.AnnotSV_*.pdf 2> /dev/null)
VC_FLAG              := $(DESTDIR)$(PYTHONDIR)/variantconvert/pipinstall.flag
VC_VERSION           := 2.0.1
VC_CONFIGDIR         := $(DESTDIR)$(PYTHONDIR)/variantconvert/src/variantconvert/configs
USEANNODIR           := #flag whether separate annotation resources directory needed (e.g. for HPC environvment)
EXRP_FILE            := #optional filepath for previously downloaded rest-prioritiser

# make install
.PHONY: install

ifeq ('$(INSTALLDIR1)' , '$(INSTALLDIR2)')
all: install-display install-documentationlight install-variantconvert install-done
install: install-display install-documentationlight install-variantconvert install-done
install-exomiser: install-exomiser-1 install-exomiser-3
else
all: install-display install-configfile install-makefile install-executable install-tcl-toolbox install-bash-toolbox install-doc install-others-doc install-variantconvert install-done
install: install-display install-configfile install-makefile install-executable install-tcl-toolbox install-bash-toolbox install-doc install-others-doc install-variantconvert install-done
install-exomiser: install-exomiser-1 install-exomiser-2 install-exomiser-3
endif

# For all PREFIX
install-display:
	@echo ""
	@echo "Installation of $(ANNOTSV)-$(VERSION):"
	@echo "----------------------------"
	@echo DESTDIR=$(DESTDIR)
	@echo PREFIX=$(PREFIX)
	@echo TCLVERSION=$(TCLVERSION)

# For PREFIX==.
install-documentationlight: $(DOCUMENTATIONS)
	@echo ""
	@if [ -n "$^" ]; then \
	    $(MV) $^ $(DESTDIR)$(DOCDIR)/$(ANNOTSV); \
	fi
	@if [ -d "$(TCLDIRDISTRIBUTED)" ]; then \
		$(MV) "$(TCLDIRDISTRIBUTED)" "$(TCLDIR)"; \
	fi

# For PREFIX!=.
install-configfile: $(CONFIGFILE)
	@echo ""
	@echo "Configfile configuration"
	@echo "------------------------"
	$(MKDIR) $(DESTDIR)$(ETCDIR)/$(ANNOTSV)
	install -p -m 0755 $(CONFIGFILE)  $(DESTDIR)$(ETCDIR)/$(ANNOTSV)

# For PREFIX!=.
install-makefile: $(MAKEFILE)
	@echo ""
	@echo "Makefile installation"
	@echo "---------------------"
	install -p -m 0755 $(MAKEFILE)  $(DESTDIR)$(PREFIX)

# For PREFIX!=.
install-executable:
	@echo ""
	@echo "Executable installation"
	@echo "-----------------------"
	$(MKDIR) $(DESTDIR)$(BINDIR)
	install -p -m 0755 bin/AnnotSV $(DESTDIR)$(BINDIR)

# For PREFIX!=.
install-tcl-toolbox: 
	@echo ""
	@echo "Tcl scripts installation"
	@echo "------------------------"
	$(MKDIR) $(DESTDIR)$(TCLDIR)/$(ANNOTSV)
	cd share/tcl ; tar cf - $(ANNOTSV) | tar xf - -C $(DESTDIR)$(TCLDIR)/

# For all PREFIX
install-variantconvert:
	@echo ""
	@echo "variantconvert installation"
	@echo "---------------------------"
	
	@if [ -d $(DESTDIR)$(PYTHONDIR)/variantconvert ]; then \
		echo "variantconvert directory found; purging locally before re-installing."; \
		rm -rf $(DESTDIR)$(PYTHONDIR)/variantconvert/; \
	fi
	git clone --branch $(VC_VERSION) https://github.com/SamuelNicaise/variantconvert.git $(DESTDIR)$(PYTHONDIR)/variantconvert/

	touch $(VC_FLAG)
	chmod 777 $(VC_FLAG)
	pip3 install -e $(DESTDIR)$(PYTHONDIR)/variantconvert/. > ./tmp.variantconvert.txt 2>&1 \
	|| pip install -e $(DESTDIR)$(PYTHONDIR)/variantconvert/. >> ./tmp.variantconvert.txt 2>&1 \
	|| python -m pip install -e $(DESTDIR)$(PYTHONDIR)/variantconvert/. >> ./tmp.variantconvert.txt 2>&1 \
	|| rm -f $(VC_FLAG)
	@if [ -f $(VC_FLAG) ]; then \
		echo "variantconvert installed"; \
		$(CHMOD) ./tmp.variantconvert.txt; \
		rm -f ./tmp.variantconvert.txt; \
		$(CHMOD) $(VC_CONFIGDIR); \
		$(MV) $(VC_CONFIGDIR)/hs1 $(VC_CONFIGDIR)/CHM13; \
		for f in $(VC_CONFIGDIR)/CHM13/annotsv*; do \
			case "$$f" in \
				*.json) \
					sed -i 's/"##contig=<ID=chr/"##contig=<ID=/g' "$$f" ;; \
			esac; \
		done; \
		# Creation of the "*.local.json" files for Conda use. \
		for genome in GRCh37 GRCh38 CHM13; do \
			for source in bed vcf; do \
				for type in combined full fullsplit; do \
					echo "touch $(VC_CONFIGDIR)/$$genome/annotsv3_from_$$source.$$type.local.json" ; \
					touch $(VC_CONFIGDIR)/$$genome/annotsv3_from_$$source.$$type.local.json; \
					$(CHMOD) $(VC_CONFIGDIR)/$$genome/annotsv3_from_$$source.$$type.local.json; \
				done; \
			done; \
		done; \
	else \
		echo "variantconvert not installed"; \
	fi


# For PREFIX!=.
install-bash-toolbox: $(BASH_SCRIPTS)
	@echo ""
	@echo "Bash scripts installation"
	@echo "-------------------------"
	$(MKDIR) $(DESTDIR)$(BASHDIR)/$(ANNOTSV)
	$(CP) $^ $(DESTDIR)$(BASHDIR)/$(ANNOTSV)

# For PREFIX!=.
install-doc: $(DOCUMENTATIONS)
	@echo ""
	@echo "Documentations installation"
	@echo "---------------------------"
	$(MKDIR) $(DESTDIR)$(DOCDIR)/$(ANNOTSV)
	$(CP) $^ $(DESTDIR)$(DOCDIR)/$(ANNOTSV)

# For PREFIX!=.
install-others-doc: share/doc/$(ANNOTSV)/Example
	$(CPDIR) $^ $(DESTDIR)$(DOCDIR)/$(ANNOTSV)


# For all PREFIX
install-done: 
	@echo ""
	@echo "Done"
	@echo ""
	@echo "WARNING: Annotations need to be installed:"
	@echo "make DESTDIR=$(DESTDIR) PREFIX=$(PREFIX) install-human-annotation"
	@echo "make DESTDIR=$(DESTDIR) PREFIX=$(PREFIX) install-mouse-annotation"



# make install_organism_annotations
install-all-annotations: install-human-annotation install-mouse-annotation                                     

install-human-annotation: install-exomiser $(if $(USEANNODIR),,Annotations_Human_$(HUMANVERSION).tar.gz)
ifndef USEANNODIR
	@echo ""
	@echo "Installation of human annotation:"
	@echo ""
	tar -xf Annotations_Human_$(HUMANVERSION).tar.gz -C $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/
	$(RM) -rf Annotations_Human_$(HUMANVERSION).tar.gz
	$(CHMOD) $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/Annotations_*
	@echo ""
	@echo "--> Human annotation installed"
else
	@echo ""
	@echo "Flag for custom annotationDir; skipping local install of human annotations"
	@echo ""
endif

# For PREFIX==.
install-exomiser-1: $(if $(USEANNODIR),,2406_phenotype.zip)
	@echo ""
	@echo "Installation of Exomiser data:"
	@echo ""
	
ifndef USEANNODIR
	$(MKDIR) -p $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/Annotations_Exomiser/2406
	unzip 2406_phenotype.zip -d $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/Annotations_Exomiser/2406/
	$(RM) -rf 2406_phenotype.zip
else
	@echo ""
	@echo "Flag for custom annotationDir; skipped Exomiser phenotypes local installation"
	@echo ""
endif
	
	$(MKDIR) -p $(DESTDIR)$(JARDIR)
ifndef EXRP_FILE
	curl -C - -LO https://github.com/exomiser/Exomiser/releases/download/14.1.0/exomiser-rest-prioritiser-14.1.0.jar
	install -p -m 0755 exomiser-rest-prioritiser-14.1.0.jar $(DESTDIR)$(JARDIR)/
	$(RM) exomiser-rest-prioritiser-14.1.0.jar
else
	@echo "Custom rest-priotiser path provided; creating symlink"
	ln -sf $(EXRP_FILE) $(DESTDIR)$(JARDIR)/$(notdir $(EXRP_FILE))
endif


# For PREFIX!=.
install-exomiser-2:
	install -D -p -m 0755 $(PROPERTIES) $(DESTDIR)$(ETCDIR)/$(ANNOTSV)


# For PREFIX==.
install-exomiser-3:
	@echo ""
	@echo "--> Exomiser data installed"

install-mouse-annotation: $(if $(USEANNODIR),,Annotations_Mouse_$(MOUSEVERSION).tar.gz) 
ifndef USEANNODIR
	@echo ""
	@echo "Installation of mouse annotation:"
	@echo ""	
	$(MKDIR) $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/
	tar -xf Annotations_Mouse_$(MOUSEVERSION).tar.gz -C $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/
	$(RM) -rf Annotations_Mouse_$(MOUSEVERSION).tar.gz
	@echo ""
	@echo "--> Mouse annotation installed"
else
	@echo ""
	@echo "Flag for custom annotationDir; skipping local install of mouse annotations"
	@echo ""
endif


Annotations_%.tar.gz:
	@echo ""
	@echo "Download AnnotSV supporting data files:"
	@echo ""
	curl -C - -LO https://www.lbgi.fr/~geoffroy/Annotations/$@

%_phenotype.zip:
	@echo ""
	@echo "Download Exomiser supporting data files:"
	@echo ""
	curl -C - -LO https://data.monarchinitiative.org/exomiser/data/$@


# make uninstall
.PHONY: uninstall

ifeq ('$(PREFIX)' , '/usr/local')
uninstall: uninstall1 uninstall4
else ifeq ('$(INSTALLDIR1)' , '$(INSTALLDIR2)')
uninstall: uninstall1 uninstall2 uninstall4
else
uninstall: uninstall1 uninstall2 uninstall3 uninstall4
endif

uninstall1:
	@echo ""
	@echo "Uninstalling of $(ANNOTSV)"
	@echo "------------------------"
	$(RM) -f $(DESTDIR)$(BINDIR)/$(ANNOTSV)
	$(RM) -f $(DESTDIR)$(BINDIR)/INSTALL_annotations.sh
	$(RM) -f $(DESTDIR)$(BINDIR)/INSTALL_code.sh
	$(RM) -rf $(DESTDIR)$(TCLDIR)/$(ANNOTSV)
	$(RM) -rf $(DESTDIR)$(PYTHONDIR)/$(ANNOTSV)
	$(RM) -rf $(DESTDIR)$(PYTHONDIR)/variantconvert
	$(RM) -rf $(DESTDIR)$(DOCDIR)/$(ANNOTSV)
	$(RM) -rf $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)
	$(RM) -rf $(DESTDIR)$(BASHDIR)/$(ANNOTSV)
	$(RM) -rf $(DESTDIR)$(ETCDIR)/$(ANNOTSV)
	$(RM) -rf $(DESTDIR)$(TESTSDIR)/$(ANNOTSV)
	$(RM) -rf $(DESTDIR)$(PREFIX)/Makefile
	$(RM) -rf $(DESTDIR)$(PREFIX)/README.md
	$(RM) -rf $(DESTDIR)$(PREFIX)/Scoring_Criteria_AnnotSV_*.xlsx
	$(RM) -rf $(DESTDIR)$(PREFIX)/.git
	$(RM) -rf $(DESTDIR)$(PREFIX)/.gitignore
	$(RM) -rf $(DESTDIR)$(PREFIX)/tmp.variantconvert.txt

uninstall2:
	$(RMDIR) --ignore-fail-on-non-empty $(DESTDIR)$(BINDIR) $(DESTDIR)$(BASHDIR) $(DESTDIR)$(TCLDIR) $(DESTDIR)$(PYTHONDIR) $(DESTDIR)$(DOCDIR) $(DESTDIR)$(SHAREDIR) $(DESTDIR)$(ETCDIR) $(DESTDIR)$(TESTSDIR)

uninstall3:
	$(RMDIR) --ignore-fail-on-non-empty $(DESTDIR)$(PREFIX)

uninstall4:
	@echo ""
	@echo "Done"



================================================
FILE: README.md
================================================
<p align="center">
    <img src="share/doc/AnnotSV/Images/AnnotSV_logo.png" width="500">

<br />

<div align="center">
    <h1 style="font-weight: bold">An integrated tool for Structural Variations annotation and ranking</h1>
</div>

<br />

# Table of contents

- ## AnnotSV Annotations Engine
    - ### [README](README.AnnotSV_3.5.7.pdf)
    - ### [Getting Started](share/doc/AnnotSV/quickstart.md)
    - ### [Ranking](share/doc/AnnotSV/ranking.md)
    - ### [Annotations](share/doc/AnnotSV/annotations.md)
- ## AnnotSV Webserver
    - ### [Overview](share/doc/AnnotSV/webserver_overview.md)
- ## AnnotSV issues
	<b>Please detail your request when <a href="https://github.com/lgmgeo/AnnotSV/issues" target="_blank">reporting a bug</a>:</b>
	- Give the version of AnnotSV and the command line used
	- Add/join an input file that allow to reproduce the bug
	- Give all the information that could have an impact on the bug reported (modifications made in the installation or in the annotation files)
	- Specify if you use Singularity...
<br />

# Collaborative work

Anyone interested in implementing new annotations/features in AnnotSV?

Thanks to the [AnnotSV user community](https://lbgi.fr/AnnotSV/acknowledgments):

    - Bugs could be tackled efficiently

    - New ideas could be investigated faster


We look forward to the opportunity to work together, feel free to fork the page if you want to help :-)




================================================
FILE: bin/AnnotSV
================================================
#!/usr/bin/env tclsh

############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the                                             #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################

# non-zero exit codes --> usually interpreted as error cases
# zero exit code --> Terminate the process without error
# exit <=> exit 0 (default)

global g_AnnotSV

proc getScriptDirectory {} {
    set scriptFilePath [file normalize [info script]]
    set scriptDir [file dirname $scriptFilePath]
    return $scriptDir
}

#if {[info exists env(ANNOTSV)]} {
#    regsub "/$" $env(ANNOTSV) "" env(ANNOTSV)
#}
#set ANNOTSVinstallDir [file normalize "$env(ANNOTSV)"]


# Setting of g_AnnotSV(installDir), g_AnnotSV(etcDir), g_AnnotSV(docDir), g_AnnotSV(tclDir) and g_AnnotSV(bashDir):
set binDirFromScript [getScriptDirectory]
regsub "/bin$" $binDirFromScript "" binDirFromScript
set g_AnnotSV(installDir) "$binDirFromScript"
set g_AnnotSV(etcDir)     "$g_AnnotSV(installDir)/etc/AnnotSV"
set g_AnnotSV(docDir)     "$g_AnnotSV(installDir)/share/doc/AnnotSV"
set tclVersion [info tclversion]
set g_AnnotSV(tclDir)     "$g_AnnotSV(installDir)/share/tcl${tclVersion}/AnnotSV"
if {![file exists $g_AnnotSV(tclDir)]} {
    set g_AnnotSV(tclDir) "$g_AnnotSV(installDir)/share/tcl/AnnotSV"
}
set g_AnnotSV(bashDir)    "$g_AnnotSV(installDir)/share/bash/AnnotSV"
# g_AnnotSV(annotationsDir) is set to "$g_AnnotSV(installDir)/share/AnnotSV" in AnnotSV-config.tcl

# Setting of "auto_path" for the use of the Tcl packages added in AnnotSV
set auto_path [linsert $::auto_path 0 $g_AnnotSV(tclDir)/tcllib]

source $g_AnnotSV(tclDir)/AnnotSV-benignsv.tcl
source $g_AnnotSV(tclDir)/AnnotSV-candidategenes.tcl
source $g_AnnotSV(tclDir)/AnnotSV-clingen.tcl
source $g_AnnotSV(tclDir)/AnnotSV-closestgenes.tcl
source $g_AnnotSV(tclDir)/AnnotSV-config.tcl
source $g_AnnotSV(tclDir)/AnnotSV-cosmic.tcl
source $g_AnnotSV(tclDir)/AnnotSV-cytoband.tcl
source $g_AnnotSV(tclDir)/AnnotSV-encodeblacklist.tcl
source $g_AnnotSV(tclDir)/AnnotSV-exac.tcl
source $g_AnnotSV(tclDir)/AnnotSV-exomiser.tcl
source $g_AnnotSV(tclDir)/AnnotSV-extann.tcl
source $g_AnnotSV(tclDir)/AnnotSV-filteredVCF.tcl
source $g_AnnotSV(tclDir)/AnnotSV-gap.tcl
source $g_AnnotSV(tclDir)/AnnotSV-gccontent.tcl
source $g_AnnotSV(tclDir)/AnnotSV-gencc.tcl
source $g_AnnotSV(tclDir)/AnnotSV-general.tcl
source $g_AnnotSV(tclDir)/AnnotSV-genes.tcl
source $g_AnnotSV(tclDir)/AnnotSV-haploinsufficiency.tcl
source $g_AnnotSV(tclDir)/AnnotSV-help.tcl
source $g_AnnotSV(tclDir)/AnnotSV-loeuf-pLI.tcl
source $g_AnnotSV(tclDir)/AnnotSV-ncbi.tcl
source $g_AnnotSV(tclDir)/AnnotSV-omim.tcl
source $g_AnnotSV(tclDir)/AnnotSV-pathogenicsv.tcl
source $g_AnnotSV(tclDir)/AnnotSV-pathogenicsnvindel.tcl
source $g_AnnotSV(tclDir)/AnnotSV-phenogenius.tcl
source $g_AnnotSV(tclDir)/AnnotSV-regulatoryelements.tcl
source $g_AnnotSV(tclDir)/AnnotSV-ranking.tcl
source $g_AnnotSV(tclDir)/AnnotSV-repeat.tcl
source $g_AnnotSV(tclDir)/AnnotSV-segdup.tcl
source $g_AnnotSV(tclDir)/AnnotSV-tad.tcl
source $g_AnnotSV(tclDir)/AnnotSV-userBED.tcl
source $g_AnnotSV(tclDir)/AnnotSV-variantconvert.tcl
source $g_AnnotSV(tclDir)/AnnotSV-vcf.tcl
source $g_AnnotSV(tclDir)/AnnotSV-write.tcl

# Setting of g_AnnotSV(Version):
if {![info exists g_AnnotSV(Version)]} {
    set configFile "$g_AnnotSV(tclDir)/AnnotSV-config.tcl"
    foreach L [LinesFromFile $configFile] {
	if {[regexp "^# AnnotSV (\[0-9\]+.\[0-9\]+(.\[0-9\]+)?)" $L match version]} {
	    set g_AnnotSV(Version) "$version"
	    break
	}
    }
}
if {![info exists g_AnnotSV(Version)]} {
    set g_AnnotSV(Version) "X.X"
}

puts "AnnotSV $g_AnnotSV(Version)"
if {[regexp "\-version|\-Version" $argv]} {
    exit
}
puts ""
puts "Copyright (C) 2017-current GEOFFROY Veronique"
puts ""
puts "Please feel free to create a Github issue for any suggestions or bug reports (https://github.com/lgmgeo/AnnotSV/issues)"
puts ""
puts "Tcl/Tk version: $tclVersion"
puts ""
puts "Application name used:"
puts "$g_AnnotSV(installDir)\n\n"

set tclVersion [split $tclVersion "."]
if {[lindex $tclVersion 0] < 8 || ([lindex $tclVersion 0] eq 8 && [lindex $tclVersion 1] < 5)} {
    puts "AnnotSV requires a release of the Tcl distribution starting with version 8.5."
    puts "(AnnotSV has not been tested with lower version)"
}

## No argument given:
if {$argv == ""} {
    puts "Arguments are missing see help below\n"
    showHelp; exit 0
}

## Needing help?
if {[regexp -nocase "help" $argv]} {showHelp; exit 0}

## Downloading configuration:
configureAnnotSV $argv


## Depending of the VCF or BED input format:
if {[regexp -nocase "\\.vcf(.gz)?$" $g_AnnotSV(SVinputFile)]} {
    ## SVinputfile is a VCF?
    ## -> need to be formated in bed
    set g_AnnotSV(bedFile) [VCFsToBED "$g_AnnotSV(SVinputFile)"]
} else {
    ## SVinputfile is a BED
    set g_AnnotSV(bedFile) $g_AnnotSV(SVinputFile)
    regsub -nocase ".bed$" $g_AnnotSV(bedFile) ".header.tsv" BEDinputHeaderFile
    if {"$g_AnnotSV(bedFile)" ne "$BEDinputHeaderFile"} {file delete -force $BEDinputHeaderFile}
    createBEDinputHeaderFile
    addNAinSamplesIDbedCol
} 

## Check VariantConvert configuration:
######################################
checkVariantconvertConfigfile

## Genes annotations:
#####################

puts "...checking the annotation data sources ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"

# Annotation of genes depending of the transcripts (RefSeq or ENSEMBL) ?
if {$g_AnnotSV(tx) eq "RefSeq"} {
    checkGenesRefSeqFile
} else {
    checkGenesENSEMBLfile
}
# Annotation with GenCC?
checkGenCCgeneFile
# Annotation with OMIM?
checkNCBIandHGNC
memorizeGeneNameAlias
checkOMIMfile
checkMorbidfile
# Annotation with HI (Haploinsufficiency)?
checkHIfile
# Annotation with ClinGen?
checkClinGenFile
# Annotation with Exomiser?
# checkNCBI (done with OMIM)
checkExomiserInstallation
# Annotation with PhenoGenius?
checkPhenoGeniusCli
# Annotation with LOEUF
checkLOEUFfile

## SVincludedInFt:
##################
# Annotations with benign genes or genomic regions?
checkBenignFiles
checkOverlappedGenesBenignFiles

# Annotation with GeneIntolerance (ExAC)?
checkGeneIntoleranceFile
checkCNVintoleranceFile

## Breakpoint annotations:
##########################
# Annotation with GC content?
checkFASTAfiles
# Annotation with Repeat?
checkRepeatFile
# Annotation with Segmental Duplication?
checkSegDupFile
# Annotation with Gap?
checkGapFile
# Annotation with ENCODE blacklist?
checkENCODEblacklistFile
# Cytoband
checkCytoband

## FtIncludedInSV annotations:
##############################
# Annotations with pathogenic genes or genomic regions?
checkPathogenicFiles
# Annotations with pathogenic SNV/indel?
checkPathoSNVindelFile
# Annotation with Regulatory Elements?
checkPromoterFile
checkEAfiles
checkGHfiles
checkMiRTargetLinkFiles
checkABCfiles
checkMPRAfiles
# Annotation with TAD?
checkTADfiles
# Annotation with COSMIC?
checkCOSMICfile

# Users BED regions annotations files:
# (from $ANNOTSV/share/AnnotSV/Annotations_$g_AnnotSV(organism)/Users/GRCh*/*ncludedIn*/*.bed)
##############################################################################################
checkUsersBED

# Users Gene-based annotation files:
# (from $ANNOTSV/Annotations_$g_AnnotSV(organism)/*/ and from user command lines "-externalGeneFiles")
######################################################################################################
# g_AnnotSV(extann) has been initialized in AnnotSV-config.tcl
# g_AnnotSV(extann) will be completed in AnnotSV-exomiser.tcl
set geneBasedDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based"
foreach annotFile [glob -nocomplain $geneBasedDir/*/*.tsv] {
    if {[regexp "_DGV_samplesInStudies.tsv$" $annotFile]} {continue}
    lappend g_AnnotSV(extann) $annotFile
}
foreach annotFile [glob -nocomplain $geneBasedDir/*/*.tsv.gz] {
    lappend g_AnnotSV(extann) $annotFile
}
set userDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Users/" 
foreach annotFile [glob -nocomplain $userDir/*.tsv] {
    lappend g_AnnotSV(extann) $annotFile
}
foreach annotFile [glob -nocomplain $userDir/*.tsv.gz] {
    lappend g_AnnotSV(extann) $annotFile
}
foreach annotFile $g_AnnotSV(externalGeneFiles) {
    lappend g_AnnotSV(extann) $annotFile
}
# Depending of the organism, genes based annotation can be absent:
if {$g_AnnotSV(extann) eq ""} {set g_AnnotSV(geneBasedAnn) 0} else {set g_AnnotSV(geneBasedAnn) 1} 



# DISPLAY
puts ""
puts "...listing arguments"
puts "\t******************************************"
puts "\tAnnotSV has been run with these arguments:"
puts "\t******************************************"
set lKey [array names g_AnnotSV]
foreach key [lsort $lKey] {
    if {[regexp "ABCann|GHann|MPRAann|EAann|Ann|bashDir|bedFile|docDir|etcDir|extann|installDir|outputColHeader|ranking|genes|samplesidTSVcol|svtTSVcol|tclDir|userDir|Version$" $key]} {continue}
    if {$g_AnnotSV($key) eq ""} {continue}
    puts "\t-$key $g_AnnotSV($key)"
}
puts "\t******************************************\n"


# Annotation with the gene track 
genesAnnotation
OrganizeAnnotation

if {[regexp "\\.bed$" $g_AnnotSV(SVinputFile)]} {
    file delete -force $BEDinputHeaderFile
}
puts "\n...AnnotSV is done with the analysis ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"




================================================
FILE: bin/INSTALL_annotations.sh
================================================
#!/bin/bash

############################################################
# Installing AnnotSV human annotations in a local directory
############################################################

# USAGE:
########
# INSTALL_annotations.sh "Version of AnnotSV human annotation" "Version of Exomiser phenotype annotations"

# AIM:
######
# Download Exomiser and AnnotSV annotations to be used with the "-annotationsDir" option

# CONTEXT:
##########
# To work with bioconda/docker/singularity, AnnotSV couldn't contain the annotations in the recipe (that would make the recipe very large, which is a bad practice in bioconda)
# Users need to download the annotation files once and pass the directory to AnnotSV at runtime with the "-annotationsDir" option.




mkdir AnnotSV_annotations
cd AnnotSV_annotations

# AnnotSV annotations
echo ""
echo "Download AnnotSV supporting data files:"
echo ""
curl -C - -LO https://www.lbgi.fr/~geoffroy/Annotations/Annotations_Human_$1.tar.gz
tar -xf Annotations_Human_$1.tar.gz -C ./
rm -rf Annotations_Human_$1.tar.gz

# Exomiser
echo ""
echo "Download Exomiser supporting data files:"
echo ""
curl -C - -LO https://data.monarchinitiative.org/exomiser/data/$2_phenotype.zip
unzip $2_phenotype.zip -d Annotations_Exomiser/$2/
rm -rf 2406_phenotype.zip

chmod -R 777 ./Annotations_*






================================================
FILE: changeLog.txt
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# An integrated tool for Structural Variations annotation                                                  #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
############################################################################################################


For more details, please see the README file.

April, 16, 2026 AnnotSV version 3.5.8
	- Add a fix for the install (issue 328)

April, 14, 2026 AnnotSV version 3.5.7
	- Add a new annotation mode: BNDproximity
		This mode allows matching SV with user-provided BED features based on breakpoint proximity rather than interval overlap. 
		A feature is reported when both its start and end coordinates are within a user-defined distance of the SV breakpoints.
		=> A new parameter is available: -breakpointProximity (default: 100 bp)
	- Improve the rules for determining the frameshift status

April, 02, 2026 AnnotSV version 3.5.6
	- Allow to customize the weights of AnnotSV ranking criteria in the configfile
	- Add of the "bracketedAltMode" option
		Defines how bracketed ALT values in VCF are interpreted:
			The SV can be considered as DEL, DUP, INS or INV, or considered as BND (TRA is always reported as BND)
			Values: ALL (default, infer all bracketed ALT as DEL, DUP, INS or INV)
					BND (treat all bracketed ALT as BND)
					comma-separated SVTYPE values among DEL, DUP, INS or INV (infer only selected SVTYPE; e.g.: "DEL,DUP". Others are treated as BND)
	- Add of the "bracketedAltMaxSize" option
	    Define a maximum SV length (Mb) for SVTYPE inference from bracketed ALT values. Above 10 Mb (default), bracketed ALT is treated as BND.
	- Return 2 unique AnnotSV_Ids for two insertions located at the same position but with different inserted sequences (issue 324)
	- Add bugfix for the interpretation of square-bracketed DUP fields in the VCF (those containing the start of the duplicated sequence)
	- Add bugfix in the Makefile for bioconda (issue 307#issuecomment-4054614762)

March, 03, 2026 AnnotSV version 3.5.5
	- Improvements of the Makefile (by @drew-sinha)
		add flag for annotation file download, expose path to rest-prioritiser 
		Annotations installion script no longer relies on AnnotSV make/install
		application.properties now has version filled in programmatically
		Non-destructive install; fix git install to allow repeats (still doesn't install for system apk builds)

February, 27, 2026 AnnotSV version 3.5.4
	- Improvements of the Makefile (by Bradford Powell @bpow-patch)
		Update install-exomiser-2 command in Makefile to support PREFIX

September, 12, 2025, AnnotSV version 3.5.3
	- Improvments of the INSTALL_annotations.sh file to be version-controlled (issue 296)

August, 29, 2025, AnnotSV version 3.5.2
	- Improvements in the GeneHancer section (several sources authorized for the downloaded files)
	- Improvements in the tests section (test_37_SVLEN) + Makefile 

August, 21, 2025, AnnotSV version 3.5.1
	- Add bugfix concerning the SV_length (issue 295)
	- Update the exomiser application.properties file
	- Update the variantconvert install
	- Update the Copyright output

July, 17, 2025, AnnotSV version 3.5
	- Add the T2T-CHM13v2.0 human annotations
	- Update GRCh38 and GRCh37 human annotations 
	- Update the Exomiser install
	- Add bugfix concerning the AnnotSV_ranking_criteria
	- Add bugfix concerning the naming of temporary files. Add the pid in the file names
	- Add bugfix concerning the boundary mismatch for ACMG scores 
	- Improvements in the tests section
	- Add the PacBio-CoLoRS Benign SV annotations (Long Read Sequencing Database, GRCh38, CHM13)
	- Return 2 unique AnnotSV_Ids for two translocations starting at the same position but ending at a different position 

March, 06, 2025, AnnotSV version 3.4.6
	- Update the PhenoGenius install (Use of the client repo https://github.com/kyauy/PhenoGeniusCli: v.1.1.3) (issue 274)

February, 27, 2025, AnnotSV version 3.4.5
	- Update the PhenoGenius install (Use of the client repo https://github.com/kyauy/PhenoGeniusCli: v.1.1.2)
	- Add the "-missingGTinSamplesid" option (to report or not sample IDs with missing alleles in the GT field (./. or .|.) in the "Samples_ID" output field)
	- Fix a bug to set start position when converting from 0-based to 1-based format in some rare special cases (issue 266)
	- Fix a bug concerning Mouse annotations (issue 257)

September, 05, 2024, AnnotSV version 3.4.4
	- Temporary fix for issues #239 and #250 (wrong PRDM10 line in the GenCC file)
	  => Code to be removed after updating annotations

August, 29, 2024, AnnotSV version 3.4.3
	- New definition of alias gene symbols used in OMIM annotation files. 
	  Keep only aliases found with the NCBI_gene_ID and validated with genomic locations
	- Add a new check for the variantconvert configuration (issue 246)
	- Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contained in CHROM (e.g. 1)

May, 14, 2024, AnnotSV version 3.4.2
	- Fix a bug when setting the cytoband annotation for large SV (issue 234)
	- Update the mm39 repeat annotations (issue 225)

May, 03, 2024, AnnotSV version 3.4.1
	- Update of the variantconvert distribution (2.0.1 installed)
	  Add of the "-variantconvertMode" option (to choose the variantconvert conversion mode)
	- Mouse annotation update (Add GRCm39/mm39 annotations)
	- Remove typos in the ranking explanation
	- Check the user bedtools version
	- Restricts the number of RE_gene features to 50, RE with "PhenoGenius specificity = "A" or Exomiser gene score > 0.7" are displayed first.
	- Integrate all the gene symbols for OMIM morbid annotations
	- Improve the creation of the benign dataset (gnomAD, 1000g and HPRC)
	- Add log files for the PhenoGenius install

February, 16, 2024, AnnotSV version 3.4
	- Human annotation update
	- Add new regulatory elements annotations:
		- Activity-by-Contact (ABC) model annotations (doi: 10.1038/s41586-021-03446-x)
		- Massively Parallel Reporter assays (MPRA) annotations (doi: 10.1038/s41467-019-11526-w)
	- Add novel benign SV annotation sources:
		- from gnomad v4 (GRCh38) (issue 201)
		- from the Human Pangenome Reference Consortium (HPRC) dataset (PACBIO long reads, GRCh38 only) (issue 202)
		- from dbVar (NCBI’s database of genomic structural variation)
	- Add new phenotype prioritization method: PhenoGenius (Yauy et al., 2023, doi: 10.1101/2022.07.29.22278181)
		- Add 3 new features: PhenoGenius_score, PhenoGenius_phenotype and PhenoGenius_specificity
	- Add 4 new features: 
		- Closest_left and Closest_right
		  AnnotSV expands the SV up to 5 megabases in both direction (left and right) and then tries to find neighboring genes
		  In both directions, the closest gene to the SV is reported
		- NCBI_gene_ID 
		- Tx_version (transcript version)
	- Gene names are now sorted by genomic coordinates and no longer sorted alphabetically ("Gene_name" feature)
	- Fix a bug when setting the cytoband annotation (issue 210)
	- Fix misleading OMIM annotation (issues 156, 132)
	- Update of the Makefile
	- Update of the "contact" recommendations in output (from email to GitHub)
	- Reorganization of the GitHub .md files

January, 15, 2024, AnnotSV version 3.3.9
	- Fix a bug when setting the "hpoVersion" variable (issue 207)

December, 22, 2023, AnnotSV version 3.3.8
	- Add of 34 unit tests

November, 03, 2023, AnnotSV version 3.3.7
	- Fix a domain error (issue 199)
	- Include code to allow FranceGenRef benign SV annotation (856 WGS with ancestries in different regions of France)
	  WARNING: not supplied as part of the AnnotSV sources. 
	- Optimize access to the exomiser application properties file for use with singularity/bioconda
	- Allow uppercase file extensions (".VCF", ".BED" or ".VCF.GZ") 
	- Use the new format of the COSMIC data source 
	- Update of the documentation in $ANNOTSV/docs/ 
	- Update of the documentation to install AnnotSV human annotations in a local directory (INSTALL_annotations.sh) 
	- Optimize a regexp
	- Fix variantconvert file name

June, 01, 2023, AnnotSV version 3.3.6
	- Add bug fix concerning some INV bracketed. The second breakend notation (which is just the reciprocal of the first) is now always identified as the mate breakend.
	- Sample IDs with missing alleles in the GT fields ("./." or ".|.") are now reported in the "Samples_ID" output field
	- Refactor variantconvert code
	- Allow description of REF/ALT values in SV input files with lowercase ACGT
	- Update of the .gitignore file 
	- Add bug fix to report only a subset of the annotation columns provided by AnnotSV 
	- Add of warning messages for the ranking (in case of missing required annotations)
	- Update the display of the default command line

April, 14, 2023, AnnotSV version 3.3.5
	- Add documentation on the "-includeCI" option
	- Add bugfix for variantconvert use in GRCh38 (when setting the REF in the VCF output file)
	- Add bugfix during the install (depending on the environment)

April, 07, 2023, AnnotSV version 3.3.4
	- Among the “po_P_*_*” features, redundancy is now removed ONLY from “po_P_*_phen” and “po_P_*_hpo”.
	  => AnnotSV keeps now the correspondence between “po_P_*_source”, “po_P_*_coord” and “po_P_*_percent” features.
	- Improvment of the running time (code part: SV partially overlapping with an established benign region)
	- Update of the Makefile (variantconvert install)
	- Remove requirement for ANNOTSV environment variable
	- Add of the "INSTALL_code.sh" and "INSTALL_annotations.sh" bash files (for a basic manual installation)
	- Add a check of the "#CHROM" header line
	- Add of the "-variantconvertDir" option (path of the variantconvert directory). By default, the variantconvert tool distributed by annotSV is used.

March, 30, 2023, AnnotSV version 3.3.3
	- Add bugfix for large input file

March, 28, 2023, AnnotSV version 3.3.2
	- Add bugfix for SV partially overlapping with an established benign region. Ranking Impact
	- Improve the 40 criteria (Loss) in the SV ranking
	- Restrict the number of "po_B_*_someG_*" features to 20

March, 24, 2023, AnnotSV version 3.3.1
	- Add bugfix with the use of the SVminSize option
	- Report the minimal LOEUF value (among those of all overlapped genes) in the SV full length annotation
	- Update of the variantconvert distribution (1.2.2 installed)

March, 23, 2023, AnnotSV version 3.3
	- Add bugfix regarding genomic start coordinates. TSV and VCF output files are now both 1-based, with inclusive-end (whatever the input file format)
	- Add interpretation of the square-bracketed SV breakend notations within the VCF. 
	  This new module relies on the homogenization rules provided within the variant-extractor tool developed by Rodrigo Martín.
	- Update of the variantconvert distribution (1.2.1 installed)
	- Automation of the variantconvert module installaton
	- Reformat of the unannotated.tsv file
	- Add of the .gitignore file
	- VCF format handling update. According to the VCF 4.4 specification, the SVTYPE has now been deprecated (due to redundancy with ALT). 
	  The SV type is now extracted primarily from the ALT column, then from the SVTYPE field in the INFO column if available.
	- Add bugfix for the TAD annotations update process

January, 31, 2023, AnnotSV version 3.2.3
	- Report of the "Samples_ID" column in ALL outputs (default, sample = NA) (required by variantconvert)
	- Add the creation of a VCF output file from a "BED" SV input file. The "-vcf" and "-svtBEDcol" options are required.
	- In VCF output, the GT is set to “1/.” for each SV if the GT is not given in input (BED input file)
	- Add bugfix concerning Mouse annotation

January, 06, 2023, AnnotSV version 3.2.2
	- Add bugfix concerning the use of variantconvert to create the VCF output file (GRCh37/GRCh38, configfiles)

December, 21, 2022, AnnotSV version 3.2.1
	- Add bugfix concerning the partial overlap with some specific dbVar SV (same start and end locations)

December 13, 2022, AnnotSV version 3.2
	- Add of a new output format: VCF
	- Add partial overlap annotation:
		- Add 4 benign gain SV annotation: po_B_gain_allG_source, po_B_gain_allG_coord, po_B_gain_someG_source, po_B_gain_someG_coord
		- Add 4 benign loss SV annotation: po_B_loss_allG_source, po_B_loss_allG_coord, po_B_loss_someG_source, po_B_loss_someG_coord
		- Add 5 pathogenic gain SV annotation: po_P_gain_phen, po_P_gain_hpo, po_P_gain_source, po_P_gain_coord, po_P_gain_percent
		- Add 5 pathogenic loss SV annotation: po_P_loss_phen, po_P_loss_hpo, po_P_loss_source, po_P_loss_coord, po_P_loss_percen
	- Add the 2B, 2G and 4O criteria (Loss) in the SV ranking
	- Add the 2B, 2C, 2F, 2G and 4O criteria (Gain) in the SV ranking
	- Update of the "make uninstall"

September 12, 2022, AnnotSV version 3.1.3
	- Human annotation update
	- Use of the new ClinGen data source format ("OMIM ID" no longer reported)
	- Removing of the DDG2P gene annotations (to avoid redundancy with GenCC)
	- Documentation update 

July 10, 2022, AnnotSV version 3.1.2
	- Add important bugfix concerning the GRCh38 coordinates of the morbid genes
	- Add bugfix concerning some Overlapped_CDS_percent values

November 25, 2021, AnnotSV version 3.1.1
	- Add bugfix when setting the ANNOTSV global environmental variable with a final "/"
	- Documentation update

November 08, 2021, AnnotSV version 3.1
	- Change the -genomeBuild default value to "GRCh38" (instead of GRCh37)
	- Use boolean values (instead of "yes"/"no") for the following option values: -candidateGenesFiltering, -includeCI, -overwrite, -reciprocal, -REreport, -REselect1 and -REselect2
	- Add the Children’s Mercy Research Institute Benign SV annotations (n=502 WGS)
	- Add the GenCC database for Gene-Disease relationship annotations
	- Add CytoBand annotation
	- Add novel regulatory element annotation:
		- Add miRNA annotation (from miRTargetLink)
		- Complete the RE_gene column output (the regulated gene name is detailed with more information: candidate gene annotation 
		and data sources (RefSeq, ENSEMBL, EnhancerAtlas, GeneHancer and/or miRTargetLink))
		- Add the "-REselect1" and "-REselect2" options to filter the RE_gene output
	- Update the benign SV annotation method:
		- Add the "-benignAF" option to change the allele frequency threshold used to select the benign SV in the data sources
		- Add 4 annotation columns: B_gain_AFmax, B_loss_AFmax, B_ins_AFmax and B_inv_AFmax (maximum allele frequency of the reported benign genomic regions)
	- Add new details in the"AnnotSV_ranking_criteria" output column: (i) detailed scoring points and (ii) remove gene names redundancy
	- Add new warnings if the compound heterozygosity analysis is not processed
	- Add the "-version" option
	- Take into account of a new format in the downloaded OMIM data (approved gene symbol)
	- Add bugfix in case of leading or trailing white space in SV type values from the SV input BED file
	- Add bugfix in case of no external BED annotation files used
	- External BED annotation files can now also be used to report any feature overlapped with the SV (even with 1bp overlap)
	- Add bugfix concerning the use of the "-candidateGenesFiltering" option
	- Include "NA" in the "-rankFiltering" default option (default = "1-5,NA")
	- Add bugfix concerning the use of the "split" annotationMode
	- Add bugfix in the SV input BED file, last column could not have empty values. Replaced with "." if empty
	- Add bugfix in section 5 of the SV ranking
	- Set the ACMG_class to "NA" if not defined 
	- Update/Add Mouse annotations (CytoBand, miRNA from miRTargetLink)

December 18, 2020, AnnotSV version 3.0
	- Major code rewrite and annotations sources reorganization
		- Significant modification of the annotations column names
	- New SV ranking based on the ACMG guidelines (Riggs et al 2020) as a replacement of the previous ranking (v2.5).
		- Add 3 annotation columns: AnnotSV ranking score; ranking decision criteria; AnnotSV ranking class
	- Merge pathogenic SV annotation (from multiple sources)
		- Pathogenic SV sources: dbVar, ClinGen, ClinVar, OMIM morbid genes
		- Add 12 annotation columns: 
		  P_gain_phen; P_gain_hpo; P_gain_source; P_gain_coord; 
		  P_loss_phen; P_loss_hpo; P_loss_source; P_loss_coord; 
		  P_ins_phen; P_ins_hpo; P_ins_source; P_ins_coord; 
		  P_inv_phen; P_inv_hpo; P_inv_source; P_inv_coord
		- Remove previous annotation columns from dbVar
	- Merge benign SV annotation (from multiple sources)
		- Benign SV sources: DGV, ClinVar, ClinGen, DDD, gnomAD, 1000g and IMH
		- Add 8 annotation columns: 
		  B_gain_source; B_gain_coord; B_loss_source; B_loss_coord; 
		  B_ins_source; B_ins_coord; B_inv_source; B_inv_coord
		- Remove previous annotation columns from DDD, DGV, gnomAD, 1000g and IMH
	- Add pathogenic SNV/indel annotation (from ClinVar)
	- Add new regulatory elements annotation (EnhancerAtlas)
	- Merge regulatory elements annotations into a single column (RefSeq/ENSEMBL, EnhancerAtlas, GeneHancer)
	- Update of the annotation data sources with the latest available versions
	- The "overlap" option default is now set to 100 % in order to be compliant with the ACMG guidelines
	- Add the percent of the CDS overlapped with the SV (in the "split" annotation lines)
	- Add the number of overlapped genes in the "full" annotation lines
	- By default, AnnotSV now expands the "start" and "end" SV positions with the VCF confidence intervals (CIPOS, CIEND) around the breakpoints (see the "includeCI" option)

November 06, 2020, AnnotSV version 2.5.2
	- Add the pLI annotation from gnomAD (pLI_gnomAD), update the pLI annotation from ExAC (pLI_ExAC)
	- Add the "LOEUF_bin" annotation (gnomAD)
	- Add the "tx start", "tx end" and "Number of exons" annotations 
		The "tx length" column has been renamed "overlapped tx length"
	  	The "CDS length" column has been renamed "overlapped CDS length" 
	- If not provided, the EXOMISER_GENE_PHENO_SCORE is set to "-1.0"
	- Update README.md

October 13, 2020: AnnotSV version 2.5.1
	- fix:  Add bugfix when the "SV type" is badly formatted

October 12, 2020: AnnotSV version 2.5
	- Add of the "ENCODE blacklist", "Segmental Duplication" and "Gap" annotation datasets
	- Fix a critical bug for DGV annotation (GRCh38)
	- Add the distance / type to the nearest splice site after considering both breakpoints (distNearestSS and nearestSStype columns)
	- Add the in-frame / out-of-frame information from overlapping genes (frameshift column)
	- Add decision criteria explaining the ranking (previously available as a separate file)
	- Remove of the ranking decision output file (*.ranking.tsv)
	- Change the names of the values for the "tx" option:
		NM      >>  RefSeq
		ENST    >>  ENSEMBL	
	- Add bugfix for exomiser use (don't use some badly formatted NCBI gene ID)
	- Add bugfix allowing to use a configfile located in the same directory as the input file

July 30, 2020: AnnotSV version 2.4
	- Update of the annotations sources (see the corresponding README section)
	- Add of the COSMIC SV dataset (Cancer)
	- AnnotSV now reports either RefSeq or Ensembl gene transcripts. Use the new "-tx" option to report either NM or ENST transcripts
	  => The « NM » column has been renamed « tx »
	  => The “RefGene” directory has been renamed "Genes"
	- Add of the "Samples_ID" feature (report of the sample names for which the SV was called)
	  => Can be disabled in the AnnotSV configfile
	- Include the new "-externalGeneFiles" option to pass external gene file(s) path in the command line
	- Integration of 4 Tcl packages (http/tar/csv/json) in the AnnotSV distribution
	- Use of the “bcftools” toolset (Li, 2011) to fix a bug with multiallelic sites from VCF input file(s)
	  => bcftools is now required if using VCF input file(s)
	- Fix the output columns order not being the same depending on the system environment
	- "1000g_AF" and "1000g_max_AF" features are not reported anymore
	- Add bugfix concerning the CDS length and tx length calculation
	- Add bugfix concerning annotation of 2 SV with the same coordinates but from different types (DEL, DUP...)
	- Add bugfix with gzipped VCF files as input
	- Add bugfix concerning the running of bash scripts (illegal use of | or |& in command)
	- Add bugfix concerning the use of the "-snvIndelFiles" and "-candidateSnvIndelSamples" options
	- Add bugfix to the Exomiser module
	- Add bugfix concerning the AnnotSV installation when PREFIX is not the current directory
	- Add bugfix concerning the use of a big "candidateGenesFile"

Dec 20, 2019: AnnotSV version 2.3
	- Include phenotype-driven annotations (HPO), based on Exomiser (Smedley et al., 2015)
	- Include the lift-over GRCh38 gnomAD SV frequency annotation
	- Include the "-annotationsDir" option to pass the annotations directory to AnnotSV at run time
	- New "AnnotSV ID" settings (to ensure unique SV identifiers)
	- Deletion filtering improvement
	- Integration of the gnomAD frequency data in the ranking
	- AnnotSV can now create two other output files:
		- A report of unannotated variants (e.g. badly formatted SV, variant length < SVminSize...)
		- A report of the decisions that explain the ranking of each SV
	- Change the names of the misleading following options: 
		vcfFiles           >>  snvIndelFiles
		vcfPASS            >>  snvIndelPASS
		vcfSamples         >>  snvIndelSamples
		filteredVCFfiles   >>  candidateSnvIndelFiles
		filteredVCFsamples >>  candidateSnvIndelSamples
	- Annotations are not distributed anymore with the sources but downloaded during the installation with the Makefile
	- AnnotSV executable is now directly located in $ANNOTSV/bin to respect the FHS
	- Add bugfix concerning the management of BED files
	- Add bugfix for the report of the compound heterozygosity (1 SV + 1 SNV/indel)
	- Add bugfix concerning the -candidateGenesFiltering option
	- Add bugfix concerning the DGV metrics
	- Add bugfix concerning the use of the "-sort" Linux command (whose behavior is OS dependant)
	- Add bugfix concerning the use of "external gene annotation files"
	- Add bugfix concerning the -txFile option

July 09, 2019: AnnotSV version 2.2
	- AnnotSV follows now the Filesystem Hierarchy Standard (FHS). Installation can be easily done using a Makefile
	- Include 2 new options:  "-candidateGenesFiltering" to select the SV overlapping a gene from the "candidateGenesFile" (default = no)
				  "-rankFiltering" to select the SV of a user-defined specific class (from 1 to 5), default = "1-5"
	- Users can now disable default annotation (through a configfile) provided by AnnotSV and only have user defined annotations
	- AnnotSV is now available for the Mouse genome SV annotations
	- Add the UTR/CDS's information from overlapping genes (location2 column)
	- Add bugfix concerning the use of the "-candidateGenesFile" and "-reciprocal" options
	- Add bugfix concerning the report of the SV length
	- Add bugfix concerning the report of gene-based annotation on the full lines

Apr 18, 2019: AnnotSV version 2.1
	- Include the gnomAD SV frequency annotation
	- Include the Ira M. Hall’s lab SV frequency annotations
	- Include GeneHancer annotation (an integrated compendium of human promoters, enhancers and their inferred target genes)
	  WARNING: not supplied as part of the AnnotSV sources. Users need to request the up-to-date GeneHancer data dedicated to AnnotSV
	- Include 2 new options: "-overwrite" to overwrite existing output results (default = yes)
	                         "-txFile" to specify a list of preferred genes transcripts to be used in priority during the annotation
	- Default of the -SVinputInfo option is now set to 1 (the additional fields from the SV input file are reported in the outputfile) 
	- Large bed annotation files are presorted, in order to be compatible for server with low specifications
	- Improve error messages and exit management (return a non-zero exit code in case of error or zero if all went fine)
	- AnnotSV minimum requirement is now starting with Tcl 8.5
	- Add bugfix concerning the homozygous and heterozygous SNV/indel counts within the SV to annotate
	- Add bugfix for the SV ranking (when the -metrics option was set to "fr")
	- Add bugfix concerning the "-reciprocal" option

Dec 21, 2018: AnnotSV version 2.0
	- Add ranking/classification for SV in 5 classes (from benign to pathogenic)
	- Include 12 additional annotations including:
		-> the creation of a unique identifier for each SV
		-> the SV length
		-> the SV type (DEL, DUP, ...)
		-> the SV ranking/classification
		-> the OMIM morbid genes
		-> the ClinGen Haploinsufficiency Score
		-> the ClinGen Triplosensitivity Score
		-> the ACMG genes
		-> the CNV intolerance from ExAC
	- Add of the "metrics" option to change numerical values to us or fr metrics (e.g. 0.2 or 0,2)
	- Add bugfix concerning empty SV input file: return a non-zero exit status (1) to continue processing in a pipeline
	- Modification of the directories structure for the annotation. Please look at the README file.
	- Options: "SVfromDBoverlap", "FeaturesOverlap" and "SVtoAnnOverlap" have been replaced by "reciprocal" and "overlap"
	- By default, AnnotSV now reports the additional fields from the SV BED input file
	- Report of the input BED file header in the output
	- Update of all annotation sources provided with AnnotSV

Sep 28, 2018: AnnotSV version 1.2
	- Support the integration of user defined annotated regions imported from BED and/or TSV file(s) into the output file
	- Include 3 additional annotations based on the dbVar pathogenic NR SV dataset:
		-> The dbVar NR SV event types (e.g. deletion, duplication…)
		-> The dbVar NR SV accession (e.g. nssv1415016)
		-> The dbVar NR SV clinical assertion (e.g. pathogenic, likely pathogenic)
	- Include 1 new option (-typeOfAnnotation) to configure the types of lines produced by AnnotSV (both, full or split)
	- OutputFile extension will always be a “.tsv” (tab separated values) extension
	- Add bugfix concerning large SV and TAD boundaries annotation

May 16, 2018: AnnotSV version 1.1.1
	- Add bugfix concerning 1000g annotation (in some cases, an insertion could be not reported and AnnotSV stopped working properly)

Mar 20, 2018: AnnotSV version 1.1
	- Add bugfix concerning counts of the homozygous and heterozygous variants in VCF files
	- Support for new SV input file format: VCF file (4.3) can now be used to describe the SV to annotate (in addition to the BED format)
	  The "-bedFile" option has now been renamed "-SVinputFile"
	  The "-bedInfo" option has now been renamed "-SVinputInfo". Default is now set to 0 (the additional fields from the SV input file are not reported in the outputfile)
	- Report additional information while counting variants in the SNV/indel input file(s):
		-> The number of SNV/indel loaded
		-> The number of SNV/indel not considered because of the “FILTER” column value
		-> The number of SNV/indel not considered because of the absence of genotype information (“GT” value can be absent in bad VCF formatted files)
		-> The number of SV present but not considered for that purpose (only SNV/indel are taken into account)
	- Set the default value of the -vcfPASS option to 0 (to be non-restrictive and consider all variants in the VCF by default).
	- Include 2 new options (-outputDir and -outputFile) to specify the output directory and file name
	- Include 3 additional annotations based on the 1000 genomes phase 3 dataset:
		-> The type of event (i.e. DEL, ALU, DUP, <CN3>...)
		-> The global allele frequency
		-> The maximum observed allele frequency across populations
	- Include a new option (-SVminSize) to set the SV minimum size (in bp). Default is 50 (bp)


Dec 21, 2017: AnnotSV version 1.0






================================================
FILE: commandLineOptions.txt
================================================

COMMAND LINE USAGE

       $ANNOTSV/bin/AnnotSV -SVinputFile 'Path of your VCF or BED input file with SV coordinates' >& AnnotSV.log &


OPTIONS

-annotationsDir:                Path of the annotations directory

-annotationMode:                Description of the types of lines produced by AnnotSV
                                Values: both (default), full or split

-bcftools:                      Path of the bcftools local installation

-bedtools:                      Path of the bedtools local installation

-benignAF:                      Allele frequency threshold to select the benign SV in the data sources
                                Range values: [0.001-0.1], default = 0.01 (i.e. 1%)	

-bracketedAltMaxSize:           Maximum SV length (Mb) for SVTYPE inference from bracketed ALT values
                                Values: positive float (default: 10; above 10 Mb, bracketed ALT is treated as BND)

-bracketedAltMode:              Defines how bracketed ALT values in VCF are interpreted:
                                The SV can be considered as DEL, DUP, INS or INV, or considered as BND (TRA is always reported as BND)
                                Values: ALL (default, infer all compatible SVTYPE: DEL,DUP,INS,INV)
                                        BND (treat all bracketed ALT as BND)
                                        comma-separated SVTYPE values among DEL, DUP, INS or INV (infer only selected SVTYPE; e.g.: "DEL,DUP". Others are treated as BND)

-breakpointProximity:           Maximum allowed distance (bp) between SV and feature breakpoints (start-to-start and end-to-end). 
                                Values: positive int (default: 100)

-candidateGenesFile:            Path of a file containing the candidate genes of the user (gene names can be space-separated, tabulation-separated, or line-break-separated)

-candidateGenesFiltering:       To select only the SV annotations ("split" and "full") overlapping a gene from the "candidateGenesFile"
                                Values: 0 (default) or 1

-candidateSnvIndelFiles:        Path of the filtered VCF input file(s) with SNV/indel coordinates for compound heterozygotes report (optional)
                                Gzipped VCF files are supported as well as regular expression

-candidateSnvIndelSamples:      To specifiy the sample names from the VCF files defined with the -candidateSnvIndelFiles option (sample names can be coma-separated or semicolon -separated)
                                Default: use all samples from the filtered VCF files

-genomeBuild:                   Genome build used
                                Values: GRCh38 (default) or GRCh37 or CHM13 or or mm9 or mm10

-help:                          More information on the arguments

-hpo:                           HPO terms list describing the phenotype of the individual being investigated
                                Values: use comma, semicolon or space separated class values
                                Default = "" (e.g.: "HP:0001156,HP:0001363,HP:0011304")

-includeCI:                     To expand the "start" and "end" SV positions with the VCF confidence intervals (CIPOS, CIEND) around the breakpoints
                                AnnotSV keeps the CIPOS and CIEND information that comes first in the INFO column (even if the fields are CIPOS95, CIEND95 or tool_CIPOS, tool_CIEND).
                                Values: 1 (default) or 0

-metrics:                       Changing numerical values from frequencies to us or fr metrics (e.g. 0.2 or 0,2)
                                Values: us (default) or fr

-minTotalNumber:                Minimum number of individuals tested to consider a benign SV for the ranking
                                Range values: [100-1000], default = 500

-missingGTinSamplesid:          To report sample IDs with missing alleles in the GT field (./. or .|.) in the "Samples_ID" output field
                                Values: 1 (default) or 0

-outputDir:                     Output path name

-outputFile:                    Output path and file name 

-overlap:                       Minimum overlap (%) between user features (User BED) and the annotated SV to be reported
                                Range values: [0-100], default = 100

-overwrite:                     To overwrite existing output results
                                Values: 1 (default) or 0

-promoterSize:                  Number of bases upstream from the transcription start site
                                Default = 500

-rankFiltering:                 To select the SV of a user-defined specific class (from 1 to 5; or NA)
                                Values: use comma separated class values, or use a dash to denote a range of values
                                (e.g.: "3,4,5" or "3-5"), default = "1-5,NA"

-reciprocal:                    Use of a reciprocal overlap between SV and user features (only for annotations with features overlapping the SV)
                                Values: 0 (default) or 1

-REreport:                      Create a report to link the annotated SV and the overlapped regulatory elements (coordinates and sources)
                                Values: 0 (default) or 1

-REselect1:                     To report only the morbid, HI, TS, candidate and phenotype matched genes 
                                Values: 1 (default) or 0
	
-REselect2:                     To report only the genes not present in "Gene_name"
                                Values: 1 (default) or 0

-samplesidBEDcol:               Number of the column reporting the samples ID for which the SV was called (if the input SV file is a BED)
                               	Range values: [4-[, default = -1 (value not given)
                                (Samples ID should be comma or space separated) 

-snvIndelFiles:	                Path of the VCF input file(s) with SNV/indel coordinates used for false positive discovery
                                Use counts of the homozygous and heterozygous variants
                                Gzipped VCF files are supported as well as regular expression

-snvIndelPASS:                  Boolean. To only use variants from VCF input files that passed all filters during the calling (FILTER column value equal to PASS)
                                Values: 0 (default) or 1

-snvIndelSamples:               To specify the sample names from the VCF files defined from the -snvIndelFiles option
                                Default: use all samples from the VCF files

-SVinputFile:                   Path of the input file (VCF or BED) with SV coordinates
                                Gzipped VCF file is supported

-SVinputInfo:                   To extract the additional SV input fields and insert the data in the outputfile
                                Values: 1 (default) or 0

-SVminSize:                     SV minimum size (in bp)
                                AnnotSV does not annotate small deletion, insertion and duplication from a VCF input file 
                                Default = 50

-svtBEDcol:                     Number of the column describing the SV type (DEL, DUP) if the input SV file is a BED
                                Range values: [4-[, default = -1 (value not given)

-tx:                            Origin of the transcripts (RefSeq or ENSEMBL)
                                Values: RefSeq (default) or ENSEMBL

-txFile:                        Path of a file containing a list of preferred genes transcripts to be used in priority during the annotation (Preferred genes transcripts names should be tab or space separated)

-variantconvertDir:             Path of the variantconvert directory
                                (by default, the variantconvert tool distributed by annotSV is used)

-variantconvertMode:            variantconvert conversion mode
                                Values: combined (default) or full or fullsplit

-version:                       Version of the AnnotSV program

-vcf:                           Creation of a VCF output file format (-svtBEDcol needs to be defined too)
                                Values: 0 (default) or 1




================================================
FILE: etc/AnnotSV/application.properties
================================================
#
# The Exomiser - A tool to annotate and prioritize genomic variants
#
# Copyright (c) 2016-2018 Queen Mary University of London.
# Copyright (c) 2012-2016 Charit Universittsmedizin Berlin and Genome Research Ltd.
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Affero General Public License as
# published by the Free Software Foundation, either version 3 of the
# License, or (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU Affero General Public License for more details.
#
# You should have received a copy of the GNU Affero General Public License
# along with this program.  If not, see <http://www.gnu.org/licenses/>.
#
spring.application.name=exomiser-prioritiser-service

server.servlet.context-path=/exomiser/api/prioritise
server.port=XXXX
server.servlet.application-display-name=Exomiser Prioritiser Server

#Absolute system path where the exomiser data is installed
#exomiser.data-directory=${project.build.testOutputDirectory}
exomiser.data-directory=YYYY
exomiser.phenotype.data-version=ZZZZ
exomiser.phenotype.random-walk-preload=true

#Actuator configuration
info.name=${server.display-name}
info.build.version=${project.version}
info.build.timestamp=${build.timestamp}


================================================
FILE: etc/AnnotSV/configfile
================================================
# This file is used to simplify the configuration of AnnotSV.
# Anything behind a hashtag is considered as a comment
# Please, feel free to change the AnnotSV options.

#------------------
# AnnotSV Options :
#------------------

-annotationMode:            "both"
-benignAF:                  0.01
-candidateGenesFiltering:   0
-genomeBuild:               "GRCh38"
-hpo:                       ""
-includeCI:                 1
-metrics:                   "us"
-minTotalNumber:            "500"
-overlap:                   100
-overwrite:                 1
-promoterSize:              500
-rankFiltering:             "1-5,NA"
-reciprocal:                0
-snvindelPASS:              0
-SVinputInfo:               1
-SVminSize:                 50
-variantconvertMode:        "combined"
-vcf:                       0


#------------------------
# AnnotSV Output columns:
#------------------------
# Output column names are listed below.
# In order to disable default annotations provided by AnnotSV, some column names (the ones that are not marked with an *) can be commented with a hash character ("#") by the user.

AnnotSV_ID                      *
SV_chrom                        *
SV_start                        *
SV_end                          *
SV_length                       *
SV_type                         *
Samples_ID                      *
Annotation_mode                 *

# Genes annotations:
CytoBand			
Gene_name                       *
Closest_left
Closest_right
Gene_count                      *
Tx                              *
Tx_version
Tx_start                        *
Tx_end                          *
Overlapped_tx_length            *
Overlapped_CDS_length           *
Overlapped_CDS_percent		*
Frameshift                      *
Exon_count                      *
Location                        *
Location2                       *
Dist_nearest_SS                 *
Nearest_SS_type                 *
Intersect_start                 *
Intersect_end                   *

# Regulatory Elements annotations:
RE_gene                         *

# Annotations with benign genes or genomic regions:
B_gain_source                   *
B_gain_coord                    *
B_gain_AFmax                    *
B_loss_source                   *
B_loss_coord                    *
B_loss_AFmax                    *
B_ins_source                    
B_ins_coord                     
B_ins_AFmax                     
B_inv_source                    
B_inv_coord
B_inv_AFmax
po_B_gain_allG_source           *       
po_B_gain_allG_coord            *       
po_B_gain_someG_source		*
po_B_gain_someG_coord		*
po_B_loss_allG_source		*
po_B_loss_allG_coord		*
po_B_loss_someG_source		*
po_B_loss_someG_coord		*

# Annotations with pathogenic genes or genomic regions:
P_gain_phen 			*
P_gain_hpo 			*
P_gain_source 			*
P_gain_coord 			*
P_loss_phen 			*
P_loss_hpo 			*
P_loss_source 			*
P_loss_coord			*
P_ins_phen
P_ins_hpo
P_ins_source
P_ins_coord
P_inv_phen
P_inv_hpo
P_inv_source
P_inv_coord
po_P_gain_phen			*
po_P_gain_hpo			*
po_P_gain_source		*
po_P_gain_coord			*
po_P_gain_percent		*
po_P_loss_phen			*
po_P_loss_hpo			*
po_P_loss_source		*
po_P_loss_coord			*
po_P_loss_percent		*

# Annotations with pathogenic snv/indel:
P_snvindel_nb			*
P_snvindel_phen			*

# Cancer
Cosmic_ID			*
Cosmic_mut_typ			*

# Breakpoints annotations
TAD_coordinate
ENCODE_experiment
GC_content_left
GC_content_right
Repeat_coord_left
Repeat_type_left
Repeat_coord_right
Repeat_type_right
Gap_left
Gap_right
SegDup_left
SegDup_right
ENCODE_blacklist_left
ENCODE_blacklist_characteristics_left
ENCODE_blacklist_right
ENCODE_blacklist_characteristics_right

# Gene-based annotations:
ACMG
HI                              *
TS                              *
GenCC_disease   
GenCC_moi       
GenCC_classification    
GenCC_pmid
NCBI_gene_ID
HGNC_gene_ID
DDD_status
DDD_mode
DDD_consequence
DDD_disease
DDD_pmid
DDD_HI_percent					*
ExAC_synZ
ExAC_misZ
ExAC_delZ
ExAC_dupZ
ExAC_cnvZ
LOEUF_bin						*
ExAC_pLI                        
GnomAD_pLI                      *
OMIM_morbid                     *
OMIM_morbid_candidate           
OMIM_ID
OMIM_phenotype
OMIM_inheritance
GnomAD_pLI			            *
PhenoGenius_score
PhenoGenius_phenotype
PhenoGenius_specificity         *
Exomiser_gene_pheno_scorea      *
Human_pheno_evidence
Mouse_pheno_evidence
Fish_pheno_evidence

# Ranking:
AnnotSV_ranking_score           *
AnnotSV_ranking_criteria        *
ACMG_class                      *


#--------------------------
# AnnotSV ranking criteria:
#--------------------------
# The comprehensive and detailed scoring guidelines are available at:
# https://lbgi.fr/AnnotSV/Documentation/Scoring_Criteria_AnnotSV_latest.xlsx

# Customizing the weights of AnnotSV ranking criteria
# ---------------------------------------------------
# To adjust the importance of each criterion in the AnnotSV ranking,
# modify the values below. Values can be positive or negative floats.

# Loss
1A_Loss         0.00
1B_Loss        -0.60
2A_Loss         1.00
2B_Loss         0.00
2C-1_Loss       0.90
2C-2_Loss       0.00
2D-1_Loss       0.00
2D-2_Loss       0.90
2D-3_Loss       0.45
2D-4_Loss       0.90
2E-1_Loss       0.90
2E-2_Loss       0.45
2E-3_Loss       0.30
2E-4_Loss       0.20
2F-4O_Loss     -1.00
2G_Loss         0.00
2H_Loss         0.15
3A_Loss         0.00
3B_Loss         0.45
3C_Loss         0.90
4O_Loss        -1.00
5F_Loss         0.00
5G_Loss         0.10
5H_Loss         0.30


# Gain
1A_Gain         0.00
1B_Gain        -0.60
2A_Gain         1.00
2B_Gain         0.00
2C_Gain        -1.00
2D_Gain        -1.00
2E_Gain         0.00
2F_Gain        -1.00
2G_Gain         0.00
2H-1_Gain       0.45
2H-2_Gain       0.00
2I-1_Gain       0.45
2I-2_Gain       0.45
2I-3_Gain       0.00
2J_Gain         0.00
2K_Gain         0.45
2L_Gain         0.00
3A_Gain         0.00
3B_Gain         0.45
3C_Gain         0.90
4O_Gain         0.00
5F_Gain         0.00
5G_Gain         0.10
5H_Gain         0.15


================================================
FILE: share/bash/AnnotSV/checkPhenoGeniusCliInstall.sh
================================================
#!/bin/bash


# Bash script: 
# A successfully executed code should exit with code 0. 
# Other values indicate an error. 


# Poetry is required
####################
poetryDir=`which poetry` 

# The "$poetryDir" directory should exist
if [ ! -e "$poetryDir" ]
then
	echo "Poetry seems not to be installed"
	echo "WARNING: No PhenoGenius annotations available."
	exit 1
fi


# Poetry version
################
# poetryVersion=`poetry --version | sed "s/Poetry (version //" | sed "s/)//"`
# e.g. Poetry (version 1.5.1)
# echo "Poetry: $poetryVersion"


# PhenogeniusCli install (if needed)
####################################
mkdir -p $ANNOTSV/share/python3/phenogeniuscli
cd $ANNOTSV/share/python3/phenogeniuscli
if [ ! -d PhenoGeniusCli ]
then
	git clone https://github.com/kyauy/PhenoGeniusCli.git >> PhenoGeniusCli.install.log 2>&1
	cd ./PhenoGeniusCli >> PhenoGeniusCli.install.log 2>&1
	# Search for the last PhenoGenius version tested/validated with AnnotSV
	git checkout tags/v.1.1.3 >> ../PhenoGeniusCli.install.log 2>&1
	rm -rf .git .gitattributes .github .gitignore >> ../PhenoGeniusCli.install.log 2>&1
	poetry config keyring.enabled false
	poetry install &> ../poetry_install.log
fi

cd $ANNOTSV/share/python3/phenogeniuscli/PhenoGeniusCli

poetry run python3 phenogenius_cli.py --help  &> ../PhenoGenius.run.test1.log
if [ `grep -c -- "--hpo_list" ../PhenoGenius.run.test1.log` == "1" ]
then
	exit 0
else
	poetry config keyring.enabled false
	poetry install &> ../poetry_install.log ;# Can be run from different servers
	poetry run python3 phenogenius_cli.py --help &> ../PhenoGenius.run.test2.log
	if [ `grep -c -- "--hpo_list" ../PhenoGenius.run.test2.log` == 1 ]
	then
		exit 0
	else
		echo "phenogenius_cli.py not installed"	
		echo "WARNING: No PhenoGenius annotations available."
		exit 1
	fi
fi




================================================
FILE: share/bash/AnnotSV/searchForAFreePortNumber.bash
================================================
#!/bin/bash

# com: Compare two sorted files line by line. Output the lines that are common, plus the lines that are unique.
#      comm [options]... File1 File2
#       -2 Suppress lines unique to file2
#       -3 Suppress lines that appear in both files
#
# seq: print a sorted sequence of numbers from 5000 to 50000
#
# ss: used to dump socket statistics.
#       -H, --no-header
#       -n, --numeric
#              Do not try to resolve service names. Show exact bandwidth
#              values, instead of human-readable.
#       -t, --tcp
#              Display TCP sockets.
#     e.g. "ss -Htan" >>> "LISTEN    0      5                       0.0.0.0:63864                  0.0.0.0:*"

comm -23 <(seq 5000 50000 | sort) <(ss -Htan | awk '{print $4}' | cut -d':' -f2 | sort -u) | head -n 1


================================================
FILE: share/doc/AnnotSV/Example/README.commands
================================================

$ANNOTSV/bin/AnnotSV -SVinputFile test1.bed -outputFile ./test1.annotated.tsv -svtBEDcol 4 -genomeBuild GRCh37 -vcf 1

$ANNOTSV/bin/AnnotSV -SVinputFile test2.vcf -outputFile ./test2.annotated.tsv -genomeBuild GRCh37 -vcf 1



================================================
FILE: share/doc/AnnotSV/Example/test1.annotated.tsv
================================================
AnnotSV_ID	SV_chrom	SV_start	SV_end	SV_length	SV_type	Biologist_annotation	Biologist_ranking	Samples_ID	Annotation_mode	CytoBand	Gene_name	Closest_left	Closest_right	Gene_count	Tx	Tx_version	Tx_start	Tx_end	Overlapped_tx_length	Overlapped_CDS_length	Overlapped_CDS_percent	Frameshift	Exon_count	Location	Location2	Dist_nearest_SS	Nearest_SS_type	Intersect_start	Intersect_end	RE_gene	P_gain_phen	P_gain_hpo	P_gain_source	P_gain_coord	P_loss_phen	P_loss_hpo	P_loss_source	P_loss_coord	P_ins_phen	P_ins_hpo	P_ins_source	P_ins_coord	po_P_gain_phen	po_P_gain_hpo	po_P_gain_source	po_P_gain_coord	po_P_gain_percent	po_P_loss_phen	po_P_loss_hpo	po_P_loss_source	po_P_loss_coord	po_P_loss_percent	P_snvindel_nb	P_snvindel_phen	B_gain_source	B_gain_coord	B_gain_AFmax	B_loss_source	B_loss_coord	B_loss_AFmax	B_ins_source	B_ins_coord	B_ins_AFmax	B_inv_source	B_inv_coord	B_inv_AFmax	po_B_gain_allG_source	po_B_gain_allG_coord	po_B_gain_someG_source	po_B_gain_someG_coord	po_B_loss_allG_source	po_B_loss_allG_coord	po_B_loss_someG_source	po_B_loss_someG_coord	GC_content_left	GC_content_right	Repeat_coord_left	Repeat_type_left	Repeat_coord_right	Repeat_type_right	Gap_left	Gap_right	SegDup_left	SegDup_right	ENCODE_blacklist_left	ENCODE_blacklist_characteristics_left	ENCODE_blacklist_right	ENCODE_blacklist_characteristics_right	ACMG	HI	TS	DDD_HI_percent	ExAC_delZ	ExAC_dupZ	ExAC_cnvZ	ExAC_synZ	ExAC_misZ	GenCC_disease	GenCC_moi	GenCC_classification	GenCC_pmid	NCBI_gene_ID	HGNC_gene_ID	OMIM_ID	OMIM_phenotype	OMIM_inheritance	OMIM_morbid	OMIM_morbid_candidate	LOEUF_bin	GnomAD_pLI	ExAC_pLI	AnnotSV_ranking_score	AnnotSV_ranking_criteria	ACMG_class
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	full	q11.21	DGCR6;PRODH;LOC122455341;DGCR5;FAM246C;DGCR2;DGCR11;ESS2;TSSK2;GSC2;LINC01311;SLC25A1;CLTCL1;HIRA;MRPL40;C22orf39;UFD1-AS1;UFD1;CDC45;CLDN5;LINC00895;SEPTIN5;SEPT5-GP1BB;GP1BB;TBX1;GNB1L;RTL10;TXNRD2;COMT;MIR4761;ARVCF;TANGO2;MIR185;DGCR8;MIR3618;MIR1306;TRMT2A;MIR6816;RANBP1;SNORA77B;ZDHHC8;CCDC188;LINC02891;LINC00896;RTN4R;MIR1286;DGCR6L;FAM230A;FAM247B;GGTLC3;TMEM191B;PI4KAP1;RIMBP3;FAM246B;FAM230J;FAM230G;ZNF74;SCARF2;KLHL22;MED15;POM121L4P;TMEM191A;PI4KA;SERPIND1;SNAP29;CRKL;LINC01637;AIFM3;LZTR1;THAP7;THAP7-AS1;TUBA3FP;P2RX6;SLC7A4;MIR649;P2RX6P;LRRC74B;BCRP2	FAM230F	LOC102724728	78																ABL1 (morbid/RE=mTL_miRNA);ACTN4 (morbid/RE=mTL_miRNA);ACVR2B (morbid/RE=mTL_miRNA);ADA2 (morbid/RE=ABC_enhancer);ADAR (morbid/RE=mTL_miRNA);ADH5 (morbid/RE=mTL_miRNA);AFF2 (HI=3/morbid/RE=mTL_miRNA);AGO1 (morbid/RE=mTL_miRNA);AGO2 (morbid/RE=mTL_miRNA);AHI1 (morbid/RE=mTL_miRNA);AHR (morbid/RE=mTL_miRNA);AKT1 (morbid/RE=mTL_miRNA);ALG1 (morbid/RE=mTL_miRNA);AMH (morbid/RE=mTL_miRNA);APCDD1 (morbid/RE=mTL_miRNA);AR (HI=3/morbid/RE=mTL_miRNA);ARID1A (HI=3/morbid/RE=mTL_miRNA);ASH1L (HI=3/morbid/RE=mTL_miRNA);ATM (HI=3/morbid/RE=mTL_miRNA);ATP6AP1 (morbid/RE=mTL_miRNA);ATP6V0A2 (morbid/RE=mTL_miRNA);ATP6V1E1 (morbid/RE=ABC_enhancer);ATR (morbid/RE=mTL_miRNA);B4GALT1 (morbid/RE=mTL_miRNA);BACH1 (morbid/RE=mTL_miRNA);BAP1 (HI=3/morbid/RE=mTL_miRNA);BBS5 (morbid/RE=mTL_miRNA);BCL10 (morbid/RE=mTL_miRNA);BLOC1S6 (morbid/RE=mTL_miRNA);BMPR1A (HI=3/morbid/RE=mTL_miRNA);BNC2 (morbid/RE=mTL_miRNA);BRD4 (morbid/RE=mTL_miRNA);C3 (morbid/RE=mTL_miRNA);CACNA1C (morbid/RE=mTL_miRNA);CAD (morbid/RE=mTL_miRNA);CALM3 (morbid/RE=mTL_miRNA);CAPN15 (morbid/RE=mTL_miRNA);CAPNS1 (morbid/RE=mTL_miRNA);CASP14 (morbid/RE=mTL_miRNA);CBL (morbid/RE=mTL_miRNA);CCDC134 (morbid/RE=mTL_miRNA);CCDC88A (morbid/RE=mTL_miRNA);CCND2 (morbid/RE=mTL_miRNA);CCNQ (morbid/RE=mTL_miRNA);CDC42 (morbid/RE=mTL_miRNA);CEP104 (morbid/RE=mTL_miRNA);CERS1 (morbid/RE=mTL_miRNA);CHRDL1 (HI=3/morbid/RE=mTL_miRNA);CLCC1 (morbid/RE=mTL_miRNA);CLCN7 (morbid/RE=mTL_miRNA)...	22q11.2 recurrent (DGS/VCFS) region (proximal, A-B) (includes TBX1);Schwannomatosis		CLN:906110;CLN:906111;CLN:917324;TS3:ISCA-37433;dbVar:nssv15121202;dbVar:nssv15132168;dbVar:nssv15132429;dbVar:nssv15132430;dbVar:nssv15132553;dbVar:nssv15132642;nssv15139997;dbVar:nssv15132749;dbVar:nssv15133139;dbVar:nssv15133442;dbVar:nssv15133527;dbVar:nssv15133528;dbVar:nssv15133531;dbVar:nssv15133921;dbVar:nssv15134211;dbVar:nssv15134239;dbVar:nssv15134353;dbVar:nssv15136015;dbVar:nssv15137439;dbVar:nssv15138177;dbVar:nssv15138869;dbVar:nssv15140282;dbVar:nssv15141369;dbVar:nssv15153269;dbVar:nssv15156361;dbVar:nssv15605811;dbVar:nssv15605831;dbVar:nssv15605876;dbVar:nssv15755816;dbVar:nssv16207465;dbVar:nssv16736612;dbVar:nssv16736616;dbVar:nssv18830899;dbVar:nssv18830992	22:18894836-20311784;22:18894836-21461752;22:18894836-21464119;22:18896973-21440514;22:18900756-21075586;22:18908833-21358123;22:18909039-21440514;22:18909045-21464119;22:18912232-20287208;22:18912515-21431174;22:18916828-21050078;22:18916829-20312661;22:18916843-20311810;22:18916843-20311858;22:18916843-20312661;22:18919943-20311763;22:18919943-20659606;22:18919943-20708934;22:18919943-21440514;22:18923899-21431174;22:18937381-21459713;22:18938162-21455556;22:18950767-21455556;22:18970562-21040836;22:18973253-21435405;22:19168759-20942862;22:20895156-21374512;22:20958985-21379958;22:21044197-21440455;22:21045039-21455556;22:21065883-21440455;22:21081261-21440455;22:21086707-21445960;22:21300291-21331188;22:21344737-21344807;22:21345949-21346047;22:21348439-21348534	22q11.2 recurrent (DGS/VCFS) region (proximal, A-B) (includes TBX1);Bernard-Soulier syndrome, type B, 231200 (3) AR;Giant platelet disorder, isolated, 231200 (3) AR;Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome, 609528 (3) AR;Combined D-2- and L-2-hydroxyglutaric aciduria, 615182 (3) AR;Myasthenic syndrome, congenital, 23, presynaptic, 618197 (3) AR;Conotruncal anomaly face syndrome, 217095 (3);DiGeorge syndrome, 188400 (3) AD;Tetralogy of Fallot, 187500 (3) AD;Velocardiofacial syndrome, 192430 (3) AD;DiGeorge_syndrome;Gastrointestinal defects and immunodeficiency syndrome 2, 619708 (3) AR;Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis, 616531 (3) AR;Spastic paraplegia 84, AR, 619621 (3) AR;Hyperprolinemia, type I, 239500 (3) AR;Schizophrenia, susceptibility to, 4, 600850 (3) AD;Meier-Gorlin syndrome 7, 617063 (3) AR;Metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration, 616878 (3) AR;Noonan syndrome 10, 616564 (3) AD;Noonan syndrome 2, 605275 (3) AR;Schwannomatosis-2, susceptibility to, 615670 (3) AD;Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|Intellectual_disability|Acute_rhabdomyolysis|Episodic_flaccid_weakness|Seizure|Cardiac_arrhythmia;Thrombophilia 10 due to heparin cofactor II deficiency, 612356 (3) AD;Van den Ende-Gupta syndrome, 600920 (3) AR	HP:0000730;HP:0001249;HP:0001250;HP:0001267;HP:0001275;HP:0001286;HP:0001303;HP:0001656;HP:0001661;HP:0001665;HP:0001666;HP:0001687;HP:0001721;HP:0002122;HP:0002125;HP:0002182;HP:0002192;HP:0002279;HP:0002306;HP:0002316;HP:0002348;HP:0002382;HP:0002386;HP:0002391;HP:0002402;HP:0002417;HP:0002430;HP:0002431;HP:0002432;HP:0002434;HP:0002437;HP:0002458;HP:0002466;HP:0002479;HP:0002482;HP:0002499;HP:0002543;HP:0002794;HP:0003752;HP:0003767;HP:0004351;HP:0005158;HP:0006833;HP:0006997;HP:0007154;HP:0007176;HP:0007180;HP:0008942;HP:0010520;HP:0011675	CLN:226591;CLN:2871255;CLN:959024;HI3:ISCA-37433;dbVar:nssv15119864;dbVar:nssv15120710;dbVar:nssv15124351;dbVar:nssv15124515;dbVar:nssv15129189;dbVar:nssv15130834;dbVar:nssv15130929;dbVar:nssv15131088;dbVar:nssv15131611;dbVar:nssv15132323;nssv15139981;dbVar:nssv15132334;dbVar:nssv15132747;dbVar:nssv15132748;dbVar:nssv15132933;dbVar:nssv15132934;dbVar:nssv15132935;dbVar:nssv15132939;dbVar:nssv15133099;dbVar:nssv15133185;dbVar:nssv15133186;dbVar:nssv15133443;dbVar:nssv15133817;dbVar:nssv15134350;nssv15139984;dbVar:nssv15134354;dbVar:nssv15134360;dbVar:nssv15134361;dbVar:nssv15134635;dbVar:nssv15134703;dbVar:nssv15134820;dbVar:nssv15134849;dbVar:nssv15136233;dbVar:nssv15137726;dbVar:nssv15137759;dbVar:nssv15137802;dbVar:nssv15138106;dbVar:nssv15138475;dbVar:nssv15139405;dbVar:nssv15139434;dbVar:nssv15139445;nssv15774763;dbVar:nssv15139759;dbVar:nssv15140043;dbVar:nssv15140048;dbVar:nssv15140057;dbVar:nssv15141198;dbVar:nssv15141722;dbVar:nssv15142496;dbVar:nssv15143197;dbVar:nssv15143645;dbVar:nssv15144279;dbVar:nssv15144449;dbVar:nssv15153165;dbVar:nssv15154011;dbVar:nssv15155693;dbVar:nssv15156360;dbVar:nssv15162020;dbVar:nssv15162021;dbVar:nssv15605807;dbVar:nssv15605829;dbVar:nssv15605830;nssv16216546;dbVar:nssv15605834;dbVar:nssv15755310;dbVar:nssv15755712;dbVar:nssv15755812;dbVar:nssv15770037;dbVar:nssv15770783;dbVar:nssv15770877;dbVar:nssv15772938;nssv15773614;nssv15775115;nssv15775184;nssv15775592;dbVar:nssv15772982;dbVar:nssv15775129;dbVar:nssv15776509;dbVar:nssv15776863;dbVar:nssv15776865;dbVar:nssv15776871;dbVar:nssv16208595;dbVar:nssv16208596;dbVar:nssv16212111;dbVar:nssv16213307;dbVar:nssv16213808;dbVar:nssv16214784;dbVar:nssv16215255;dbVar:nssv16215257;dbVar:nssv16216543;dbVar:nssv16216544;nssv8639845;nssv15161831;dbVar:nssv16254574;dbVar:nssv16254739;dbVar:nssv16255831;dbVar:nssv16736634;dbVar:nssv17171460;nssv17974163;dbVar:nssv17171461;dbVar:nssv17171462;dbVar:nssv17171559;dbVar:nssv17171582;dbVar:nssv17171772;dbVar:nssv17649936;dbVar:nssv17649973;dbVar:nssv17955605;dbVar:nssv17955606;dbVar:nssv17955868;dbVar:nssv17970829;dbVar:nssv17971092;dbVar:nssv17971094;dbVar:nssv17971356;dbVar:nssv17971399;dbVar:nssv17977042;dbVar:nssv18329601;dbVar:nssv18329824;dbVar:nssv18330264;dbVar:nssv18330322;dbVar:nssv18330820;dbVar:nssv18786380;dbVar:nssv18790095;dbVar:nssv18792883;dbVar:nssv18841927;nssv18830898;dbVar:nssv8639589;nssv15122532;morbid:CDC45;morbid:GP1BB;morbid:LZTR1;morbid:PI4KA;morbid:PRODH;morbid:SCARF2;morbid:SERPIND1;morbid:SLC25A1;morbid:SNAP29;morbid:TANGO2;morbid:TBX1	22:18894836-20238206;22:18894836-20311763;22:18894836-20659606;22:18894836-21440514;22:18894836-21461752;22:18894836-21461811;22:18894836-21464119;22:18896973-20311763;22:18896973-21382953;22:18896973-21440514;22:18899288-18925066;22:18900294-18924066;22:18900295-18923806;22:18900443-21440514;22:18900669-18923820;22:18900669-19747220;22:18900669-19770565;22:18900689-21351637;22:18900896-18923882;22:18901005-21408430;22:18905110-19015451;22:18910311-18923800;22:18910311-18923820;22:18910311-19770565;22:18912232-20287208;22:18912404-21431174;22:18912871-21431174;22:18915348-21463730;22:18916828-20311858;22:18916829-20312661;22:18916829-21041014;22:18916829-21049800;22:18916843-19004772;22:18916843-20310938;22:18916843-20311858;22:18916843-20312661;22:18916843-20716903;22:18916843-20767095;22:18916843-21011216;22:18916843-21033371;22:18916843-21075592;22:18916844-20311858;22:18916844-21033401;22:18916844-21075592;22:18918742-20311922;22:18919580-21460595;22:18919943-20311763;22:18919943-20659606;22:18919943-20708934;22:18919943-21025713;22:18919943-21440514;22:18922152-21449911;22:18938162-20229017;22:18938162-20996250;22:18938162-21455556;22:18962314-21455556;22:18973253-21435405;22:18999804-21455499;22:18999804-21455556;22:19016664-21463730;22:19023802-21440455;22:19023802-21440514;22:19035018-21461811;22:19035324-21464119;22:19036287-21208284;22:19058830-21440514;22:19156118-19529130;22:19163094-19166249;22:19163624-19770565;22:19184001-21416024;22:19336599-21208828;22:19467443-19508131;22:19470352-19481849;22:19647906-21153690;22:19709401-21142058;22:19709436-19712313;22:19709952-19963280;22:19710419-21142058;22:19711062-19712294;22:19711829-19711877;22:19743227-19755855;22:19743425-19747210;22:19743425-19754400;22:19743425-19770565;22:19743474-19747220;22:19747168-19754390;22:19748301-19754857;22:19748451-19748647;22:20008633-20054687;22:20027161-20063237;22:20028564-20053554;22:20028990-20062723;22:20028993-20062955;22:20029136-20062954;22:20029701-20062756;22:20030823-20041691;22:20030823-20053554;22:20030859-20052185;22:20030879-20049206;22:20030879-20052185;22:20036383-20045782;22:20036384-20045781;22:20036385-20045784;22:20039969-20043556;22:20708891-21407690;22:20718171-21427936;22:20733496-21463730;22:20745763-21460658;22:20754408-21440515;22:20754408-21457610;22:20754423-21461752;22:20778874-20792112;22:20921343-21459713;22:21061979-21213099;22:21062169-21463730;22:21062567-21463730;22:21065883-21455556;22:21067570-21414817;22:21069074-21463730;22:21074921-21440514;22:21075576-21454721;22:21081285-21457610;22:21128401-21142008;22:21213295-21245502;22:21335907-21346541;22:21336586-21353321;22:21336662-21337398;22:21336662-21351637;22:21348908-21348985			CLN:1349334;dbVar:nssv17974796	22:21337344-21337343;22:21337344-21337456	22q11.2 recurrent (DGS/VCFS) region (proximal, A-D) (includes TBX1)		dbVar:nssv15161990;dbVar:nssv15139753;dbVar:nssv15150031;dbVar:nssv15150491;dbVar:nssv15146973;dbVar:nssv15135173;dbVar:nssv15137211;dbVar:nssv15129128;dbVar:nssv15161991;dbVar:nssv15161992;dbVar:nssv15164031;dbVar:nssv16254742;dbVar:nssv16297047;dbVar:nssv15151140;nssv16207460;dbVar:nssv15141953;dbVar:nssv15156366;nssv15772157;dbVar:nssv17976875;dbVar:nssv16207463;dbVar:nssv16296938;dbVar:nssv16207464;dbVar:nssv15774756;dbVar:nssv18329565;dbVar:nssv15149512;nssv15150794;dbVar:nssv15139758;dbVar:nssv15755803;dbVar:nssv15774287;dbVar:nssv15605979;dbVar:nssv15139756;dbVar:nssv15605980;dbVar:nssv15137771;dbVar:nssv15132295;dbVar:nssv15133039;dbVar:nssv15133301;dbVar:nssv15132518;dbVar:nssv15134365;dbVar:nssv15146613;dbVar:nssv15133111;dbVar:nssv15147269;dbVar:nssv15121201;dbVar:nssv15136264;dbVar:nssv15605803;dbVar:nssv15605804;dbVar:nssv16736606;dbVar:nssv15128891;dbVar:nssv15126571;dbVar:nssv15128500;dbVar:nssv16254735;dbVar:nssv15140068;dbVar:nssv15137505;dbVar:nssv15128758;dbVar:nssv15152138;dbVar:nssv15154014;dbVar:nssv15755815;dbVar:nssv15755817;dbVar:nssv16255668;dbVar:nssv18329661;dbVar:nssv18330205;dbVar:nssv15156359;dbVar:nssv15142823;dbVar:nssv15140066;dbVar:nssv15133432;dbVar:nssv15605805;dbVar:nssv15605808;dbVar:nssv15605806;dbVar:nssv15132858;dbVar:nssv15133520;dbVar:nssv15132127;dbVar:nssv15133128;dbVar:nssv15136566;dbVar:nssv15133389;dbVar:nssv15140044;dbVar:nssv15133925;dbVar:nssv15138146;dbVar:nssv15133393;nssv15139545;dbVar:nssv15135020;dbVar:nssv15132566;dbVar:nssv15164039;dbVar:nssv17955656;dbVar:nssv15132423;dbVar:nssv15132330;dbVar:nssv15126758;dbVar:nssv15127771;dbVar:nssv15126436;dbVar:nssv17649918;dbVar:nssv15162011;dbVar:nssv15125959;dbVar:nssv17955842;dbVar:nssv15139556;dbVar:nssv15122631;dbVar:nssv15123767;dbVar:nssv15162014;dbVar:nssv15143627;dbVar:nssv16865904;dbVar:nssv15123759;dbVar:nssv17650003;dbVar:nssv15755805;dbVar:nssv15132167;dbVar:nssv15133526;dbVar:nssv15162019;dbVar:nssv15145463;dbVar:nssv15145234;dbVar:nssv16207634;dbVar:nssv15605810;dbVar:nssv15605809;dbVar:nssv18842027;dbVar:nssv18842024;nssv18842046;dbVar:nssv18326316;dbVar:nssv15139749;dbVar:nssv15140369;dbVar:nssv15136643;dbVar:nssv15131931;nssv15133075;dbVar:nssv15131925;dbVar:nssv15134715;dbVar:nssv15132426;TS3:ISCA-37446;dbVar:nssv15605828;dbVar:nssv15153271;dbVar:nssv17976874;dbVar:nssv15139887;dbVar:nssv15137698;dbVar:nssv15139242;dbVar:nssv18329574;dbVar:nssv18329591;dbVar:nssv17976884;dbVar:nssv15132247;nssv15139527;dbVar:nssv15131997;nssv15139348;dbVar:nssv15137835;dbVar:nssv15132026;nssv15139977;dbVar:nssv15127741;dbVar:nssv18830785;dbVar:nssv15154013;dbVar:nssv16254573;dbVar:nssv16255670;dbVar:nssv15133914;dbVar:nssv15145464;dbVar:nssv15755306;dbVar:nssv15132169;dbVar:nssv17976883;dbVar:nssv16207466;dbVar:nssv15132044;dbVar:nssv15139694;dbVar:nssv15120579;dbVar:nssv15133646;dbVar:nssv15139596;dbVar:nssv15132083;dbVar:nssv18330192;dbVar:nssv15139716;dbVar:nssv15135998;dbVar:nssv15139748	22:16054668-51243435;22:16054692-27296513;22:16054692-51220902;22:16054692-51237463;22:16054692-51237518;22:16087695-19010508;22:16087695-20311784;22:16114245-18917748;22:16114245-20737903;22:16114245-51195728;22:16114245-51211392;22:16197006-51224252;22:16800001-21500000;22:16888900-18916828;22:16888900-20311858;22:16888900-20312661;22:16888900-21915509;22:16888900-22290476;22:16888900-26483608;22:16888900-27657507;22:16888900-51197838;22:16888901-18916828;22:16888901-51197838;22:17012936-21431054;22:17041670-20247250;22:17055734-20312661;22:17072087-20130474;22:17264512-23238029;22:17289828-20311922;22:17397499-18984519;22:17397499-20311763;22:17397499-20659606;22:17397499-20708934;22:17397499-21505417;22:17397499-24754904;22:17397499-51178264;22:17397634-19584890;22:17397634-51178213;22:18533255-18942804;22:18570313-19184416;22:18609713-21408430;22:18611224-21408430;22:18628020-20311763;22:18628133-21712996;22:18628133-21900562;22:18628133-51244566;22:18628148-21722313;22:18637140-20289862;22:18640730-21465659;22:18641480-21917191;22:18644791-21465659;22:18645354-21465659;22:18648856-21461017;22:18648856-21927646;22:18648867-21465659;22:18648868-20311858;22:18648868-21798907;22:18649190-20311858;22:18650665-21440455;22:18650665-21440514;22:18650676-21455556;22:18650746-21460220;22:18650804-21386010;22:18650804-21460220;22:18651615-21440455;22:18652638-21914178;22:18660554-21455556;22:18661700-21505445;22:18661700-22905025;22:18661725-20311763;22:18661725-21025713;22:18661725-21440514;22:18661725-21461752;22:18661725-21505417;22:18661725-21661435;22:18661725-32217179;22:18675474-21465050;22:18687211-19060954;22:18704555-21411284;22:18706002-21440514;22:18713492-20412989;22:18713492-21712996;22:18713492-21917191;22:18841375-21465101;22:18844633-21463730;22:18848021-21468378;22:18873002-21469900;22:18874966-21028946;22:18877788-20306993;22:18877788-21462353;22:18878410-21467387;22:18886916-20278471;22:18886916-21461017;22:18886916-23421058;22:18889978-21463189;22:18890265-21464056;22:18890272-21505417;22:18890272-21561514;22:18891399-21463730;22:18891967-20311852;22:18891967-21631412;22:18892576-20306993;22:18892576-20308800;22:18892576-21460220;22:18893839-20508931;22:18893839-21416074;22:18893889-21414817;22:18894340-21032422;22:18894340-21440455;22:18894821-21505445;22:18894836-21505417;22:18894836-21561514;22:18894836-21809009;22:18909039-21798755;22:18912232-21465672;22:18912515-21922035;22:18916828-21465659;22:18916828-21804886;22:18916829-21465659;22:18916829-21465662;22:18916843-21465659;22:18916844-21798907;22:18916844-21804563;22:18917048-21465659;22:18919943-21505417;22:18919943-21561514;22:18919943-21801604;22:18919943-21809009;22:18919988-21561468;22:18936190-21464809;22:18970561-21465662;22:19024657-21465662;22:19035090-22672555;22:19058830-21561514;22:19346606-21864619;22:19819478-21464764;22:20402634-21561514;22:20732809-21465659;22:20732809-25193541;22:20748977-21499971;22:20754423-21505417;22:21022841-22712836;22:21025655-21505417;22:21025655-22336268;22:21025655-22400806;22:21029657-22485776;22:21081261-21505417;22:21261515-37583387;22:21400684-23654222	7.30;22.85;7.31;7.30;7.30;3.96;33.54;0.82;39.86;7.32;7.32;7.34;54.67;1.08;41.40;41.41;51.11;47.57;26.78;23.86;7.49;1.08;7.49;57.40;42.19;43.53;40.40;43.01;46.89;5.65;48.62;54.10;54.78;62.54;34.92;7.61;31.55;7.61;11.71;47.16;89.81;89.86;84.15;83.29;78.51;7.88;83.04;84.41;90.95;78.43;91.08;91.10;91.25;78.36;91.21;85.21;81.56;85.23;91.25;91.25;91.30;91.31;91.08;91.31;91.28;78.78;91.62;90.35;60.55;85.87;90.14;91.61;91.67;90.35;85.65;18.95;92.10;44.45;92.97;93.09;89.33;85.66;80.20;97.92;98.08;98.05;98.94;99.08;98.81;99.34;99.24;99.43;99.69;56.67;99.81;99.82;98.25;96.18;99.87;99.80;93.79;99.84;99.84;99.91;99.94;99.96;99.96;99.98;99.98;98.42;98.42;96.35;88.17;88.42;99.94;84.78;99.94;88.20;99.94;99.94;99.94;88.38;88.21;99.94;98.40;96.31;88.29;88.06;96.31;99.97;99.94;99.94;66.78;96.11;84.09;99.96;91.60;99.79;16.39;95.23;94.50;26.11;91.39;33.45;31.88;29.84;90.26;1.24;2.81	22q11.2 recurrent (DGS/VCFS) region (proximal, A-D) (includes TBX1)		dbVar:nssv15134634;dbVar:nssv16208592;dbVar:nssv16208593;dbVar:nssv15141423;dbVar:nssv15132388;dbVar:nssv15128094;dbVar:nssv15132068;dbVar:nssv15133055;dbVar:nssv18787557;nssv18791888;dbVar:nssv16207650;dbVar:nssv15153272;dbVar:nssv15135754;dbVar:nssv15133431;nssv15139986;dbVar:nssv15125556;dbVar:nssv15126775;dbVar:nssv15133864;dbVar:nssv15755811;dbVar:nssv15755813;dbVar:nssv18326404;dbVar:nssv15126915;dbVar:nssv15128185;dbVar:nssv15145459;dbVar:nssv15145460;dbVar:nssv15138286;dbVar:nssv15154015;nssv18326430;dbVar:nssv18330227;dbVar:nssv17976889;dbVar:nssv17976891;dbVar:nssv15153273;dbVar:nssv18330460;dbVar:nssv17976888;dbVar:nssv15145461;dbVar:nssv15138328;dbVar:nssv17976880;dbVar:nssv15154017;dbVar:nssv18329577;dbVar:nssv15140316;dbVar:nssv15133433;dbVar:nssv18326382;dbVar:nssv17955872;dbVar:nssv15133434;dbVar:nssv16255835;dbVar:nssv15132708;dbVar:nssv15134184;dbVar:nssv15132128;nssv15139349;dbVar:nssv15134982;dbVar:nssv15135883;dbVar:nssv15133394;nssv16091745;dbVar:nssv15132006;nssv15139990;dbVar:nssv15137884;dbVar:nssv15133435;dbVar:nssv18792765;dbVar:nssv15135454;dbVar:nssv15133438;nssv15140028;dbVar:nssv15132230;nssv15139684;dbVar:nssv15132655;nssv15139976;dbVar:nssv15136079;dbVar:nssv15132507;nssv15139975;dbVar:nssv15132389;dbVar:nssv17976452;dbVar:nssv15164040;dbVar:nssv15137872;dbVar:nssv16254738;dbVar:nssv15127636;dbVar:nssv15128166;dbVar:nssv15127784;dbVar:nssv16208773;dbVar:nssv15145231;dbVar:nssv15145040;dbVar:nssv18786377;dbVar:nssv15145232;dbVar:nssv15139558;dbVar:nssv15163611;dbVar:nssv16215256;dbVar:nssv15128065;dbVar:nssv17955534;dbVar:nssv15163612;dbVar:nssv15145462;dbVar:nssv15145233;dbVar:nssv15163613;dbVar:nssv15132390;dbVar:nssv15163614;dbVar:nssv15162012;dbVar:nssv15139255;dbVar:nssv15162013;dbVar:nssv15162015;dbVar:nssv17976449;dbVar:nssv17955549;dbVar:nssv15162016;nssv16215222;nssv16215239;nssv16865884;dbVar:nssv15162017;dbVar:nssv15164042;dbVar:nssv15143222;dbVar:nssv15162018;dbVar:nssv16865881;dbVar:nssv15164043;dbVar:nssv15755824;dbVar:nssv17650004;dbVar:nssv17649858;dbVar:nssv16297048;dbVar:nssv17517456;dbVar:nssv15141730;dbVar:nssv15126093;dbVar:nssv15125439;dbVar:nssv15755804;dbVar:nssv15121171;dbVar:nssv15133439;dbVar:nssv15132392;dbVar:nssv15132132;dbVar:nssv15133440;dbVar:nssv15136213;dbVar:nssv15605874;nssv15605879;dbVar:nssv17976881;dbVar:nssv15119655;dbVar:nssv18842051;dbVar:nssv17173212;dbVar:nssv17173202;dbVar:nssv18792648;dbVar:nssv16091922;dbVar:nssv15143862;dbVar:nssv17976675;dbVar:nssv18830700;dbVar:nssv18786378;dbVar:nssv18786379;dbVar:nssv15140698;dbVar:nssv15139562;dbVar:nssv15140747;dbVar:nssv15140051;dbVar:nssv15133317;nssv15143213;dbVar:nssv15131926;dbVar:nssv15605919;dbVar:nssv15755810;HI3:ISCA-37446;dbVar:nssv15139269;dbVar:nssv15137499;dbVar:nssv15138712;dbVar:nssv18330193;dbVar:nssv15139855;nssv18326386;dbVar:nssv15139854;nssv15153270;dbVar:nssv15154016;nssv17976890;dbVar:nssv15152149;dbVar:nssv15137491;dbVar:nssv18330326;dbVar:nssv18329598;dbVar:nssv18330218;dbVar:nssv15141653;dbVar:nssv15142207;dbVar:nssv15755814;dbVar:nssv15132248;nssv15139690;dbVar:nssv15134351;dbVar:nssv15132463;nssv15139699;dbVar:nssv15132523;dbVar:nssv15155695;dbVar:nssv18831006;dbVar:nssv17976279;dbVar:nssv15139289;dbVar:nssv15139467;dbVar:nssv15142401;dbVar:nssv15134356;dbVar:nssv18330006;dbVar:nssv15137446;dbVar:nssv17976741;dbVar:nssv15153268;dbVar:nssv15156357;dbVar:nssv18842023;dbVar:nssv15132608;dbVar:nssv15145465;dbVar:nssv15145466;dbVar:nssv15145235;dbVar:nssv15772502;dbVar:nssv15154008;dbVar:nssv15156354;dbVar:nssv15755308;nssv15755309;dbVar:nssv15155696;dbVar:nssv18330327;dbVar:nssv18326378;dbVar:nssv18329593;dbVar:nssv18330275;dbVar:nssv18329587;dbVar:nssv18329620;dbVar:nssv17956682;dbVar:nssv15776637;dbVar:nssv17649919;dbVar:nssv18326434;dbVar:nssv18326440;dbVar:nssv15120712;dbVar:nssv15139564;dbVar:nssv16208598;dbVar:nssv15755307;dbVar:nssv15156347;dbVar:nssv18330257;dbVar:nssv15755311;dbVar:nssv17957425;dbVar:nssv15121593;dbVar:nssv15154007;dbVar:nssv15134856;dbVar:nssv18330729;dbVar:nssv18330196;dbVar:nssv17977102	22:16087695-19363465;22:16888900-20125005;22:16888900-20730144;22:16888901-20026751;22:17019016-20718227;22:17177912-19892632;22:17397499-20311763;22:17397499-20708934;22:17565983-20052185;22:18475386-23764120;22:18626109-21800797;22:18628020-21464119;22:18628020-21505417;22:18628133-21561468;22:18628133-21883879;22:18628148-21440515;22:18631365-21800471;22:18636750-21800471;22:18639781-21910280;22:18641480-21712996;22:18641480-21722262;22:18642647-21717111;22:18642647-21742277;22:18644242-21465662;22:18644543-21465659;22:18644544-21800797;22:18644791-21798907;22:18644791-21800471;22:18644791-21915509;22:18644792-21041014;22:18645354-21800797;22:18646694-21631412;22:18648857-21465662;22:18648867-21798907;22:18648867-21800797;22:18648868-21465659;22:18650665-21440455;22:18650676-21455556;22:18655799-21726191;22:18660136-21737597;22:18660554-21455556;22:18661700-21457610;22:18661700-21505445;22:18661725-20659606;22:18661725-21440514;22:18661725-21461811;22:18661725-21464119;22:18661725-21505417;22:18661725-21561514;22:18661725-21809009;22:18671630-21536841;22:18689517-21588615;22:18706002-20311763;22:18706002-20659606;22:18706002-21025713;22:18706002-21440514;22:18706002-21464119;22:18706002-21505417;22:18706002-21809009;22:18718029-21326012;22:18728119-21811991;22:18765086-21661435;22:18765103-21661435;22:18788000-21065894;22:18788000-21468378;22:18788000-21684798;22:18789966-21591197;22:18790223-21697998;22:18820423-21477877;22:18834446-21414817;22:18834453-21575702;22:18844633-21463730;22:18844633-21608479;22:18844633-21797812;22:18848021-21468378;22:18861210-21630630;22:18861749-21463730;22:18868433-20331055;22:18868433-21477877;22:18872509-21465050;22:18874457-20306317;22:18875870-21470273;22:18875957-21466715;22:18876631-21465659;22:18878410-21465050;22:18878410-21907671;22:18884515-21484289;22:18884715-21483289;22:18886916-21463730;22:18886916-21465050;22:18886916-21467387;22:18886916-21811991;22:18889491-20312668;22:18889491-21463730;22:18889491-21466715;22:18889491-21917190;22:18889572-21464697;22:18889694-21465485;22:18889951-21466053;22:18889970-21462658;22:18890043-21440455;22:18890163-21464056;22:18890222-21561468;22:18890265-21540347;22:18890272-18999862;22:18890272-20328113;22:18890272-20659606;22:18890272-21394730;22:18890272-21461811;22:18891527-21796215;22:18892576-21460220;22:18893345-21650280;22:18893736-18924066;22:18893839-20307561;22:18893883-21563420;22:18893883-21571027;22:18893887-21386103;22:18893888-18923800;22:18893889-18973671;22:18893889-21414817;22:18893889-21481925;22:18893889-21570386;22:18894079-21414817;22:18894340-20255110;22:18894340-20255154;22:18894340-21440455;22:18894340-21440514;22:18894836-21505417;22:18894836-21561514;22:18900756-21800277;22:18912232-21465672;22:18912232-21465672;22:18916828-21465662;22:18916829-21465659;22:18916829-21465662;22:18916829-21800797;22:18916843-21465659;22:18916843-21465662;22:18916843-21798907;22:18916843-21804716;22:18916843-21804886;22:18916844-21465659;22:18916844-21800471;22:18916844-21915509;22:18917048-21465659;22:18917048-21465662;22:18919478-21800471;22:18919943-21505417;22:18919943-21505558;22:18919943-21561514;22:18919943-21809009;22:18935464-21465659;22:18936190-21464809;22:18936191-21464809;22:18970562-21465662;22:19024657-21465659;22:19024658-21465662;22:19029603-21505417;22:19046678-21465662;22:20279767-23822986;22:20310411-21804886;22:20311904-21465659;22:20311904-21800797;22:20609933-21576553;22:20659548-21561514;22:20703817-21503296;22:20703817-21631412;22:20713276-21477877;22:20716877-21465659;22:20716877-21465662;22:20716877-21798907;22:20716877-21800471;22:20716877-23819697;22:20716878-21465659;22:20725309-21465659;22:20725310-21804563;22:20725319-21800797;22:20728958-21798907;22:20728958-21800797;22:20728958-21915096;22:20729389-21465662;22:20730997-21465342;22:20732809-21465659;22:20732809-21800471;22:20733428-21505417;22:20749626-23972878;22:21029656-22481498;22:21033587-21800471;22:21049800-21465662;22:21049801-21465662;22:21059670-21800471;22:21059670-21804716;22:21065883-21937680;22:21075676-21465662;22:21081261-24593820;22:21092649-21465662;22:21188488-21804597;22:21462567-22962196	14.31;38.01;47.78;36.07;49.29;36.76;48.62;54.78;46.55;48.58;80.93;90.59;89.29;87.59;78.92;90.52;81.07;81.21;78.56;83.65;83.40;83.57;82.89;91.06;91.07;81.40;81.46;81.42;78.55;89.57;81.42;86.08;91.21;81.56;81.51;91.21;91.25;91.30;83.68;83.49;91.62;91.66;90.35;88.33;91.61;91.67;91.68;90.35;88.60;81.63;89.67;88.62;88.24;90.33;91.86;93.09;93.15;91.78;82.80;93.22;83.31;88.71;88.71;95.31;95.86;88.69;91.72;88.36;96.68;97.66;93.73;98.08;92.96;87.00;98.05;92.77;98.73;98.19;98.46;99.10;98.58;99.03;99.17;99.24;99.33;84.82;98.83;98.87;99.69;99.66;99.57;87.84;99.62;99.79;99.69;84.86;99.77;99.75;99.74;99.81;99.81;99.82;96.18;96.95;95.84;99.68;99.74;99.82;99.82;88.45;99.91;93.19;96.37;99.93;96.24;95.97;99.96;96.83;98.81;99.96;99.28;95.99;99.97;99.96;99.96;99.98;99.98;98.42;96.35;88.41;99.94;99.94;99.94;99.94;99.94;88.33;99.94;99.94;88.38;88.21;88.20;99.94;88.34;84.95;99.94;99.94;88.33;98.40;98.40;96.31;88.06;99.94;99.97;99.97;99.94;99.94;99.94;98.33;99.94;33.43;77.20;99.87;77.39;88.37;89.20;95.10;81.96;98.20;99.79;99.79;69.06;68.96;24.08;99.79;99.79;68.46;68.70;68.71;68.59;61.98;99.79;99.83;99.79;68.50;94.65;22.17;29.92;56.14;99.63;99.63;54.60;54.29;45.68;99.60;10.90;99.59;44.74;0.10	626	2-hydroxyglutaric_aciduria;Abnormality_of_metabolism/homeostasis;Acute_rhabdomyolysis;Autism_spectrum_disorder;Bardet-Biedl_syndrome;Bernard_Soulier_syndrome;CEDNIK_syndrome;CLDN5-related_neurodevelopmental_disorder;CLDN5_deficiency;Cardiac_arrhythmia;Cardiovascular_phenotype;D,L-2-hydroxyglutaric_aciduria;DiGeorge_syndrome;Emery-Dreifuss_muscular_dystrophy;Episodic_flaccid_weakness;Hereditary_cancer-predisposing_syndrome;Hypertrophic_cardiomyopathy_1;Hypomyelinating_leukodystrophy_2;Inborn_genetic_diseases;Intellectual_disability;LZTR1-related_disorder;LZTR1-related_schwannomatosis;Male_infertility_with_azoospermia_or_oligozoospermia_due_to_single_gene_mutation;Meier-Gorlin_syndrome_7;Metabolic_crises_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration;Myasthenic_syndrome,_congenital,_23,_presynaptic;Neurodevelopmental_disorder;Noonan_syndrome;Noonan_syndrome_1;Noonan_syndrome_10;Noonan_syndrome_2;Noonan_syndrome_and_Noonan-related_syndrome;PI4KA-related_disorder;Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis;Proline_dehydrogenase_deficiency;RASopathy;Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome;SLC25A1-related_disorder;Schizophrenia_4;Schwannomatosis;See_cases;Seizure;Spastic_paraplegia_84,_autosomal_recessive;TANGO2-related_disorder;TBX1-related_disorder;Thrombocytopenia;Van_den_Ende-Gupta_syndrome;Velocardiofacial_syndrome;not_specified										IMH	22:17036164-22613666	0.1686			22:18667571-18994853 DDD:56146;22:18877788-19033532 dgv543n27;22:18884850-18926400 gnomAD-SV_v2.1_DUP_22_50647;22:18912158-18998999 esv3647250;22:19148049-19148136 gnomAD-SV_v2.1_DUP_22_50677;22:20062642-20063204 IMH;22:20313251-20369884 DDD:56225;22:20330330-20450295 DDD:56232;22:20659548-20717455 DDD:56255;22:21033800-21039000 gnomAD-SV_v2.1_DUP_22_50819;22:21383283-21845355 esv2760719	22:18655861-19006984 dgv99e203;22:18876429-19006125 DDD:56173;22:18882313-19012377 DDD:56174;22:18912158-18998999 1000g;22:18924000-18940000 gnomAD-SV_v2.1_DUP_22_50652;22:19702276-19702320 DDD:56203;22:20067805-20068161 DDD:56218;22:20322450-20718598 DDD:56226;22:20343574-20380608 DDD:56234;22:20705946-20718598 DDD:56260;22:21088868-21089010 DDD:56283			chr22:18884925-18927000 dbVar;chr22:18912157-18998999 dbVar;chr22:18920358-18923595 dbVar;chr22:18934402-18934486 dbVar;chr22:18938445-18969406 dbVar;chr22:18961454-18962214 dbVar;chr22:18977575-18977640 dbVar;chr22:18977576-18977640 dbVar;chr22:18979860-18979920 dbVar;chr22:18984228-18985696 dbVar;chr22:18994879-18998062 dbVar;chr22:18997267-19009786 dbVar;chr22:19008418-19009937 dbVar;chr22:19041070-19041296 dbVar;chr22:19050181-19050386 dbVar;chr22:19063483-19063613 dbVar;22:19063767-19063900 gnomAD-SV_v2.1_DEL_22_181349;chr22:19087245-19091323 dbVar;chr22:19091546-19099675 dbVar;chr22:19099906-19100607 dbVar...	chr22:18884924-19013000 dbVar;chr22:18902898-18902992 dbVar;chr22:18912910-18913458 dbVar;chr22:18929400-18935100 dbVar;chr22:18934999-21466000 dbVar;chr22:18943458-18943555 dbVar;chr22:18961457-18962214 dbVar;22:18977576-18977640 1000g;22:18977576-18977640 gnomAD-SV_v2.1_DEL_22_181334;chr22:18980769-18984165 dbVar;chr22:18990004-18990064 dbVar;chr22:18997195-19009720 dbVar;chr22:19006733-19006786 dbVar;chr22:19008684-19010259 dbVar;chr22:19050028-19050086 dbVar;chr22:19054635-19055096 dbVar;chr22:19063767-19063900 dbVar;chr22:19085539-19085825 dbVar;chr22:19091504-19102801 dbVar;22:19098616-19100995 dgv1286e212...	0.445	0.320	22:18894850-18894969	L1ME2z	22:21464126-21464591	L1MA7			22:18889511-18912230							1		97.89	-0.807902299547855	-1.20830830104818	-0.791505674827999	2.94244265911253	5.29477062168781							606810;190315;603465;138720;602054;606448;116790;616830;605566;613619;600286;142360;604202;600574			yes	yes	0	1.0000e+00	1.0000e+00	1.9	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3C (78 genes, +0.90);5F (+0.00)	5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	DGCR6				NM_005675	6	18893832	18899601	4766	392	59	yes	5	intron2-txEnd	CDS-3'UTR	597	5'	18894835	18899601																										DDD:56146;DDD:56173;DDD:56174;dgv543n27;dgv99e203;gnomAD-SV_v2.1_DUP_22_50647	22:18655861-19006984;22:18667571-18994853;22:18876429-19006125;22:18877788-19033532;22:18882313-19012377;22:18884850-18926400	0.0355	dbVar	chr22:18884924-19013000;chr22:18884925-18927000	0.01				IMH	22:17036164-22613666;22:18655109-20719124	0.1686																										61.1				-0.678746019468492	-0.22775445384527					8214	HGNC:2846						9	9.8176e-12	7.6210e-07			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	PRODH				NM_016335	6	18900293	18923806	23513	1803	100	no	14	txStart-txEnd	5'UTR-3'UTR			18900293	18923806								dbVar:nssv17649973;dbVar:nssv17971399	22:18900295-18923806;22:18910311-18923800															11	Inborn_genetic_diseases;Proline_dehydrogenase_deficiency;Schizophrenia_4	DDD:56146;DDD:56173;DDD:56174;dgv543n27;dgv99e203;gnomAD-SV_v2.1_DUP_22_50647	22:18655861-19006984;22:18667571-18994853;22:18876429-19006125;22:18877788-19033532;22:18882313-19012377;22:18884850-18926400	0.0355	dbVar	chr22:18884924-19013000;chr22:18884925-18927000	0.01				IMH	22:17036164-22613666;22:18655109-20719124	0.1686																								30	0	45.38				0.360135634788785	0.772811927860626	hyperprolinemia type 1	AR	Definitive;Strong;Supportive	10192398;12217952;12525555;15662599;19736351;20524212;20524212[PMID]_23462603[PMID];23462603;26978485;28202261;28851938;5031477	5625	HGNC:9453	606810	Hyperprolinemia, type I, 239500 (3) AR;(Schizophrenia, susceptibility to, 4), 600850 (3) AD	AD;AR	yes	yes	6	5.3577e-12	4.7536e-06			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	LOC122455341				NR_173081	1	18926981	18935206	8225	0	0	NA	2	txStart-txEnd	UTR			18926981	18935206																										1000g;DDD:56146;DDD:56173;DDD:56174;dgv543n27;dgv99e203;esv3647250;gnomAD-SV_v2.1_DUP_22_50652	22:18655861-19006984;22:18667571-18994853;22:18876429-19006125;22:18877788-19033532;22:18882313-19012377;22:18912158-18998999;22:18912158-18998999;22:18924000-18940000	0.0355	dbVar	chr22:18884924-19013000;chr22:18912157-18998999	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851	0.1686																																																full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	DGCR5				NR_110533	2	18957980	19018755	60775	0	0	NA	6	txStart-txEnd	UTR			18957980	19018755																										dgv543n27	22:18877788-19033532	0.0100	dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847	0.4801																																				26220	HGNC:16757											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	FAM246C				NM_001396027	1	19017036	19017734	698	696	100	no	3	txStart-txEnd	5'UTR-3'UTR			19017036	19017734																										dgv543n27	22:18877788-19033532	0.0100	dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				117134596	HGNC:54842											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	DGCR2				NM_005137	3	19023798	19109925	86127	1653	100	no	10	txStart-txEnd	5'UTR-3'UTR			19023798	19109925																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										39.12				-0.375038933750903	0.817637812863819	schizophrenia	AD	Limited		9993	HGNC:2845						4	5.1573e-06	1.0959e-03			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	DGCR11				NR_024157	1	19033674	19035888	2214	0	0	NA	1	txStart-txEnd	UTR			19033674	19035888																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				25786	HGNC:17226											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	ESS2				NM_022719	3	19117791	19132164	14373	1431	100	no	10	txStart-txEnd	5'UTR-3'UTR			19117791	19132164																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				8220	HGNC:16817											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	TSSK2				NM_053006	5	19118820	19120135	1315	1077	88	no	1	txStart-txEnd	5'UTR-3'UTR			19118820	19120135																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										33.13	-2.62354415217069	-2.53125239294469	-2.47162789907313	-0.184731887964386	1.02819617031079					23617	HGNC:11401						6	3.8610e-03	4.1565e-03			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	GSC2				NM_005315	2	19134505	19137805	3300	618	100	no	3	txStart-txEnd	5'UTR-3'UTR			19134505	19137805																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										65.74				1.18735715980007	0.932740471460801					2928	HGNC:4613						9	4.4347e-03	3.7186e-02			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	LINC01311				NR_103767	1	19159218	19160345	1127	0	0	NA	1	txStart-txEnd	UTR			19159218	19160345																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				100652736	HGNC:50503											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	SLC25A1				NM_001256534	2	19163093	19166018	2925	957	100	no	8	txStart-txEnd	5'UTR-3'UTR			19163093	19166018																								9	2-hydroxyglutaric_aciduria;D,L-2-hydroxyglutaric_aciduria;Inborn_genetic_diseases;Myasthenic_syndrome,_congenital,_23,_presynaptic;SLC25A1-related_disorder				dbVar	chr22:18934999-21466000;chr22:19161075-19192940	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																								30		46.07	-2.62354415217069	-2.53125239294469	-2.47162789907313	0.459211010381399	1.99698466418685	D,L-2-hydroxyglutaric aciduria;mitochondrial disease;myasthenic syndrome, congenital, 23, presynaptic;presynaptic congenital myasthenic syndrome	AD;AR	Definitive;Limited;Strong;Supportive	23561848;23561848[PMID]_23393310[PMID];26273529;26870663;29238895;31527857;31808147;NULL	6576	HGNC:10979	190315	Combined D-2- and L-2-hydroxyglutaric aciduria, 615182 (3) AR;Myasthenic syndrome, congenital, 23, presynaptic, 618197 (3) AR	AR	yes		3	5.8829e-02	6.3354e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	CLTCL1				NM_007098	4	19166985	19279242	112257	4923	100	no	33	txStart-txEnd	5'UTR-3'UTR			19166985	19279242																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										72.86	-2.62354415217069	-2.53125239294469	-2.47162789907313	-0.597972033048653	-1.19469008098196	congenital insensitivity to pain with severe intellectual disability;multiple congenital anomalies/dysmorphic syndrome	AD;AR	Limited;Supportive	26068709[PMID]	8218	HGNC:2093						5	2.5101e-37	1.2408e-26			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	HIRA				NM_003325	4	19318220	19419256	101036	3054	100	no	25	txStart-txEnd	5'UTR-3'UTR			19318220	19419256																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																								0	0	19.48	-2.51547904504873	-2.53125239294469	-2.47162789907313	-0.543665561522748	3.98018572942351	neurodevelopmental disorder	AD	Limited	33417013	7290	HGNC:4916						0	1.0000e+00	1.0000e+00			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	MRPL40				NM_003776	4	19420067	19423598	3531	621	100	no	4	txStart-txEnd	5'UTR-3'UTR			19420067	19423598																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										54.99	-2.62354415217069	-2.53125239294469	-2.47162789907313	0.0822917398873284	-0.450618700229176					64976	HGNC:14491						4	5.2924e-02	2.0082e-02			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	C22orf39				NM_173793	5	19428408	19435234	6826	318	100	no	3	txStart-txEnd	5'UTR-3'UTR			19428408	19435234																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										70.45	-2.53806827104914	-2.53125239294469	-2.47162789907313	0.128056348383697	0.836381939603491					128977	HGNC:27012						9	1.9976e-05	3.6900e-07			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	UFD1-AS1				NR_186687	1	19434956	19439211	4255	0	0	NA	2	txStart-txEnd	UTR			19434956	19439211																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				105372860	HGNC:55917											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	UFD1				NM_005659	7	19437433	19466716	29283	924	100	no	12	txStart-txEnd	5'UTR-3'UTR			19437433	19466716																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				7353	HGNC:12520											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	CDC45				NM_001178010	2	19467348	19508135	40787	1797	100	no	20	txStart-txEnd	5'UTR-3'UTR			19467348	19508135						Meier-Gorlin syndrome 7, 617063 (3) AR		dbVar:nssv15124515;morbid:CDC45	22:19467443-19508131;22:19470352-19481849															10	Meier-Gorlin_syndrome_7				dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										8.4	-2.57292784443109	-2.53125239294469	-2.47162789907313	0.554183575869215	1.2901097836858	Meier-Gorlin syndrome;Meier-Gorlin syndrome 7	AD;AR	Definitive;Strong;Supportive	11416137;121376;149250;27374770;27374770[PMID];282832;30986546	8318	HGNC:1739	603465	Meier-Gorlin syndrome 7, 617063 (3) AR	AR	yes		3	4.6237e-05	6.9104e-02			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	CLDN5				NM_001130861	1	19510546	19512860	2314	912	52	no	1	txStart-txEnd	5'UTR-3'UTR			19510546	19512860																								3	CLDN5-related_neurodevelopmental_disorder;CLDN5_deficiency;Neurodevelopmental_disorder				dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										50.93				2.94244265911253	3.34022892264706	neurodevelopmental disorder	AD	Limited	35714222;36477332	7122	HGNC:2047						1	8.9512e-01	7.4052e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	LINC00895				NR_024381	1	19553652	19554362	710	0	0	NA	1	txStart-txEnd	UTR			19553652	19554362																													dbVar	chr22:18934999-21466000;chr22:19528613-19558447;chr22:19531786-19559055	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				150185	HGNC:48580											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	SEPTIN5				NM_002688	6	19702025	19710842	8817	1110	100	no	12	txStart-txEnd	5'UTR-3'UTR			19702025	19710842																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				5413	HGNC:9164											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	SEPT5-GP1BB				NR_037611	1	19704742	19712297	7555	0	0	NA	12	txStart-txEnd	UTR			19704742	19712297						Bernard-Soulier syndrome, type B, 231200 (3) AR;Giant platelet disorder, isolated, 231200 (3) AR		dbVar:nssv17977042;morbid:GP1BB	22:19711062-19712294;22:19711829-19711877															8	Bernard_Soulier_syndrome;Thrombocytopenia				dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																																full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	GP1BB				NM_000407	5	19711061	19712294	1233	621	100	no	2	txStart-txEnd	5'UTR-3'UTR			19711061	19712294						Bernard-Soulier syndrome, type B, 231200 (3) AR;Giant platelet disorder, isolated, 231200 (3) AR		dbVar:nssv17977042;morbid:GP1BB	22:19711062-19712294;22:19711829-19711877															8	Bernard_Soulier_syndrome;Thrombocytopenia				dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																								30		78.01				-0.00224146961144303	0.855158778511627	Bernard-Soulier syndrome;autosomal dominant macrothrombocytopenia	AD;AR	Definitive;Strong;Supportive	10887115;12447957;15213102;18825380;19484238;22886561[PMID];23995613;28064200[PMID]	2812	HGNC:4440	138720	Bernard-Soulier syndrome, type B, 231200 (3) AR;Giant platelet disorder, isolated, 231200 (3) AR	AR	yes		7	5.1249e-01	1.0112e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	TBX1				NM_001379200	1	19748300	19754857	6557	1515	100	no	7	txStart-txEnd	5'UTR-3'UTR			19748300	19754857						Conotruncal anomaly face syndrome, 217095 (3);DiGeorge syndrome, 188400 (3) AD;Tetralogy of Fallot, 187500 (3) AD;Velocardiofacial syndrome, 192430 (3) AD;DiGeorge_syndrome		CLN:959024;morbid:TBX1	22:19748301-19754857;22:19748451-19748647															27	DiGeorge_syndrome;Inborn_genetic_diseases;TBX1-related_disorder;Velocardiofacial_syndrome				dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																								1	0	4.92	-2.62354415217069	-2.53125239294469	-2.47162789907313	2.36782594176173	3.38001100960461	22q11.2 deletion syndrome;conotruncal heart malformations;velocardiofacial syndrome	AD	Definitive;Strong;Supportive	11239417;11242049;11242110;11748311;14585638;14585638[PMID];18636631;192430;20054531;20937753;24637876;24998776;25860641;29500247	6899	HGNC:11592	602054	Conotruncal anomaly face syndrome, 217095 (3);DiGeorge syndrome, 188400 (3) AD;Tetralogy of Fallot, 187500 (3) AD;Velocardiofacial syndrome, 192430 (3) AD	AD	yes		2	8.3661e-01	9.8340e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	GNB1L				NM_053004	3	19770745	19842397	71652	984	100	no	8	txStart-txEnd	5'UTR-3'UTR			19770745	19842397																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										48.57	-2.62354415217069	-2.53125239294469	-2.47162789907313	-0.373621593221624	0.590344002361273					54584	HGNC:4397						5	4.7419e-05	1.2635e-03			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	RTL10				NM_024627	6	19833668	19842397	8729	1095	82	no	3	txStart-txEnd	5'UTR-3'UTR			19833668	19842397																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				79680	HGNC:26112											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	TXNRD2				NM_006440	5	19863044	19929341	66297	1575	100	no	18	txStart-txEnd	5'UTR-3'UTR			19863044	19929341																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										72.21	-2.62354415217069	-2.53125239294469	-2.47162789907313	0.348188483468328	0.327140414338646	dilated cardiomyopathy;familial glucocorticoid deficiency;familial isolated dilated cardiomyopathy;glucocorticoid deficiency 5	AD;AR	Limited;Supportive	21247928[PMID];24601690[PMID];30237576;32476818	10587	HGNC:18155	606448	?Glucocorticoid deficiency 5, 617825 (3) AR	AR		yes	5	3.4688e-11	1.0692e-08			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	COMT				NM_000754	4	19929294	19957498	28204	816	100	no	6	txStart-txEnd	5'UTR-3'UTR			19929294	19957498																								1	Bardet-Biedl_syndrome				dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										40.8	-2.62354415217069	-2.53125239294469	-2.47162789907313	0.465852147917107	0.557839148920189	paroxysmal dyskinesia	AD	Moderate		1312	HGNC:2228	116790	(Panic disorder, susceptibility to), 167870 (3) ?AD;(Schizophrenia, susceptibility to), 181500 (3) AD	?AD;AD		yes	8	1.1377e-06	8.4666e-04			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	MIR4761				NR_039918	1	19951275	19951357	82	0	0	NA	1	txStart-txEnd	UTR			19951275	19951357																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				100616414	HGNC:41591											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	ARVCF				NM_001670	3	19957418	20004346	46928	2889	100	no	20	txStart-txEnd	5'UTR-3'UTR			19957418	20004346																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										54.56	-2.62354415217069	-2.53125239294469	-2.47162789907313	0.425870777992255	-0.701931719398633					421	HGNC:728						4	5.0422e-11	8.2184e-07			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	TANGO2				NM_001322141	2	20008632	20054687	46055	1110	100	no	9	txStart-txEnd	5'UTR-3'UTR			20008632	20054687						Metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration, 616878 (3) AR;Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|Intellectual_disability|Acute_rhabdomyolysis|Episodic_flaccid_weakness|Seizure|Cardiac_arrhythmia	HP:0000730;HP:0001249;HP:0001250;HP:0001267;HP:0001275;HP:0001286;HP:0001303;HP:0001656;HP:0001661;HP:0001665;HP:0001666;HP:0001687;HP:0001721;HP:0002122;HP:0002125;HP:0002182;HP:0002192;HP:0002279;HP:0002306;HP:0002316;HP:0002348;HP:0002382;HP:0002386;HP:0002391;HP:0002402;HP:0002417;HP:0002430;HP:0002431;HP:0002432;HP:0002434;HP:0002437;HP:0002458;HP:0002466;HP:0002479;HP:0002482;HP:0002499;HP:0002543;HP:0002794;HP:0003752;HP:0003767;HP:0004351;HP:0005158;HP:0006833;HP:0006997;HP:0007154;HP:0007176;HP:0007180;HP:0008942;HP:0010520;HP:0011675	CLN:226591;dbVar:nssv15770877;dbVar:nssv15772938;nssv15773614;nssv15775115;nssv15775184;nssv15775592;dbVar:nssv15772982;dbVar:nssv15775129;dbVar:nssv16216543;dbVar:nssv17171772;dbVar:nssv17971094;dbVar:nssv18790095;dbVar:nssv8639589;nssv15122532;morbid:TANGO2	22:20008633-20054687;22:20028564-20053554;22:20030823-20041691;22:20030823-20053554;22:20030859-20052185;22:20030879-20049206;22:20030879-20052185;22:20036383-20045782;22:20036384-20045781;22:20036385-20045784;22:20039969-20043556															27	Abnormality_of_metabolism/homeostasis;Acute_rhabdomyolysis;Cardiac_arrhythmia;Episodic_flaccid_weakness;Inborn_genetic_diseases;Intellectual_disability;Metabolic_crises_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration;Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome;Seizure;TANGO2-related_disorder				dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										51.91	-2.62354415217069	-2.53125239294469	-2.47162789907313	1.46130508236304	0.279301120222081	metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration;recurrent metabolic encephalomyopathic crises-rhabdomyolysis-cardiac arrhythmia-intellectual disability syndrome	AR	Moderate;Strong	26805781;26805782	128989	HGNC:25439	616830	Metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration, 616878 (3) AR	AR	yes		4	1.4769e-04	4.2224e-06			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	MIR185				NR_029706	1	20020661	20020743	82	0	0	NA	1	txStart-txEnd	UTR			20020661	20020743																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				406961	HGNC:31556											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	DGCR8				NM_022720	7	20067763	20099395	31632	2322	100	no	14	txStart-txEnd	5'UTR-3'UTR			20067763	20099395																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										5.07	-2.46581011772843	-2.53125239294469	-2.47162789907313	0.690563071344625	4.03153091509844					54487	HGNC:2847						0	9.9973e-01	9.9990e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	MIR3618				NR_037412	1	20073268	20073356	88	0	0	NA	1	txStart-txEnd	UTR			20073268	20073356																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				100500860	HGNC:38937											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	MIR1306				NR_031706	1	20073580	20073665	85	0	0	NA	1	txStart-txEnd	UTR			20073580	20073665																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				100302197	HGNC:35371											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	TRMT2A				NM_001331039	2	20099397	20104749	5352	1932	100	no	12	txStart-txEnd	5'UTR-3'UTR			20099397	20104749																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										68.23	-2.62354415217069	-2.53125239294469	-2.47162789907313	-1.98609532754524	-0.363927890852326					27037	HGNC:24974						5	1.0841e-08	1.3059e-05			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	MIR6816				NR_106874	1	20102208	20102274	66	0	0	NA	1	txStart-txEnd	UTR			20102208	20102274																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				102465490	HGNC:50256											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	RANBP1				NM_001278639	2	20103626	20114878	11252	837	100	no	6	txStart-txEnd	5'UTR-3'UTR			20103626	20114878																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										8.76	-2.62354415217069	-2.53125239294469	-2.47162789907313	-1.04492215962902	2.06932219421127					5902	HGNC:9847						2	8.2235e-01	3.3622e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	SNORA77B				NR_145765	1	20113924	20114049	125	0	0	NA	1	txStart-txEnd	UTR			20113924	20114049																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				109617010	HGNC:52221											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	ZDHHC8				NM_001185024	2	20119326	20135530	16204	2337	100	no	11	txStart-txEnd	5'UTR-3'UTR			20119326	20135530																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										37.82	-2.62354415217069	-2.53125239294469	-2.47162789907313	-0.408428770523539	2.39258092860216					29801	HGNC:18474						1	8.5288e-01	9.8899e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	CCDC188				NM_001365892	2	20135938	20138578	2640	1209	100	no	9	txStart-txEnd	5'UTR-3'UTR			20135938	20138578																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				388849	HGNC:51899											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	LINC02891				NR_038460	2	20186251	20192441	6190	0	0	NA	4	txStart-txEnd	UTR			20186251	20192441																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				284865	HGNC:55221											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	LINC00896				NR_026919	1	20193854	20196060	2206	0	0	NA	1	txStart-txEnd	UTR			20193854	20196060																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				150197	HGNC:26519											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	RTN4R				NM_023004	6	20228937	20255841	26904	1422	100	no	2	txStart-txEnd	5'UTR-3'UTR			20228937	20255841																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																										35.77				-0.800223805913347	1.18081437151802					65078	HGNC:18601	605566	(Schizophrenia, susceptibility to), 181500 (3) AD	AD		yes	1	9.5882e-01	5.2644e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	MIR1286				NR_031618	1	20236656	20236734	78	0	0	NA	1	txStart-txEnd	UTR			20236656	20236734																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005	0.4801																																				100302118	HGNC:35279											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	DGCR6L				NM_033257	4	20301760	20307583	5823	663	100	no	5	txStart-txEnd	5'UTR-3'UTR			20301760	20307583																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:18655109-20719124;22:19014638-21718005	0.1686																										79.33				0.698499439551705	0.174075190759776					85359	HGNC:18551						7	5.0636e-05	1.2857e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	FAM230A				NR_165629	1	20326419	20350461	24042	0	0	NA	12	txStart-txEnd	UTR			20326419	20350461																										DDD:56225;DDD:56226	22:20313251-20369884;22:20322450-20718598	0.0509	DDD:56225;DDD:56226;dbVar	chr22:18934999-21466000;22:20313251-20369884;22:20322450-20718598	0.0959				IMH	22:17036164-22613666;22:18655109-20719124;22:19014638-21718005	0.1686																										97.89										653203	HGNC:45045						7	4.8065e-01				full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	FAM247B				NR_186690	1	20351090	20362291	11201	0	0	NA	2	txStart-txEnd	UTR			20351090	20362291																										DDD:56225;DDD:56226;DDD:56232;DDD:56234	22:20313251-20369884;22:20322450-20718598;22:20330330-20450295;22:20343574-20380608	0.0509	DDD:56225;DDD:56226;DDD:56232;DDD:56234;dbVar	chr22:18934999-21466000;22:20313251-20369884;22:20322450-20718598;22:20330330-20450295;22:20343574-20380608	0.0959				IMH	22:17036164-22613666;22:18655109-20719124;22:19014638-21718005	0.1686																																																full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	GGTLC3				NM_001355479	1	20366210	20368028	1818	678	100	no	6	txStart-txEnd	5'UTR-3'UTR			20366210	20368028																										DDD:56225;DDD:56226;DDD:56232;DDD:56234	22:20313251-20369884;22:20322450-20718598;22:20330330-20450295;22:20343574-20380608	0.0509	DDD:56225;DDD:56226;DDD:56232;DDD:56234;dbVar	chr22:18934999-21466000;22:20313251-20369884;22:20322450-20718598;22:20330330-20450295;22:20343574-20380608	0.0959				IMH	22:17036164-22613666;22:18655109-20719124;22:19014638-21718005	0.1686																										94.16										728226	HGNC:33426											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	TMEM191B				NM_001242313	1	20377668	20380440	2772	1041	100	no	9	txStart-txEnd	5'UTR-3'UTR			20377668	20380440																										DDD:56226;DDD:56232;DDD:56234	22:20322450-20718598;22:20330330-20450295;22:20343574-20380608	0.0509	DDD:56226;DDD:56232;DDD:56234;dbVar	chr22:18934999-21466000;22:20322450-20718598;22:20330330-20450295;22:20343574-20380608;chr22:20366424-20403000;chr22:20374000-20389000	0.0284				IMH	22:17036164-22613666;22:18655109-20719124;22:19014638-21718005	0.1686																																				728229	HGNC:33600											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	PI4KAP1				NR_003563	1	20383730	20398695	14965	0	0	NA	15	txStart-txEnd	UTR			20383730	20398695																										DDD:56226;DDD:56232	22:20322450-20718598;22:20330330-20450295	0.0509	DDD:56226;DDD:56232;dbVar	chr22:18934999-21466000;22:20322450-20718598;22:20330330-20450295;chr22:20366424-20403000	0.0189				IMH	22:17036164-22613666;22:18655109-20719124;22:19014638-21718005	0.1686																																				728233	HGNC:33576											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	RIMBP3				NM_015672	2	20455681	20461786	6105	4920	91	no	1	txStart-txEnd	5'UTR-3'UTR			20455681	20461786																										DDD:56226	22:20322450-20718598	0.0509	DDD:56226;HI40:ISCA-46728;dbVar;dgv817e199	chr22:18934999-21466000;22:20322450-20718598;22:20423846-20488792;22:20428071-20499197	0.0300				IMH	22:17036164-22613666;22:18655109-20719124;22:19014638-21718005	0.1686																										90.21										85376	HGNC:29344						7	9.0005e-09				full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	FAM246B				NM_001396026	1	20483850	20484549	699	699	100	no	1	txStart-txEnd	5'UTR-3'UTR			20483850	20484549																										DDD:56226	22:20322450-20718598	0.0509	DDD:56226;HI40:ISCA-46728;dbVar;dgv817e199	chr22:18934999-21466000;22:20322450-20718598;22:20423846-20488792;22:20428071-20499197	0.0300				IMH	22:17036164-22613666;22:18655109-20719124;22:19014638-21718005	0.1686																																				117134597	HGNC:54843											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	FAM230J				NR_136569	2	20632119	20656858	24739	0	0	NA	9	txStart-txEnd	UTR			20632119	20656858																										DDD:56226	22:20322450-20718598	0.0509	DDD:56226;dbVar	chr22:18934999-21466000;22:20322450-20718598	0.0118				IMH	22:17036164-22613666;22:18655109-20719124;22:19014638-21718005	0.1686																																				729461	HGNC:52448											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	FAM230G				NR_165637	1	20689194	20706786	17592	0	0	NA	7	txStart-txEnd	UTR			20689194	20706786																										DDD:56226;DDD:56255	22:20322450-20718598;22:20659548-20717455	0.0509	DDD:56226;DDD:56255;dbVar	chr22:18934999-21466000;22:20322450-20718598;22:20659548-20717455	0.0604				IMH	22:17036164-22613666;22:18655109-20719124;22:19014638-21718005	0.1686																																				101927859	HGNC:52423											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	ZNF74				NM_001256524	2	20748440	20762745	14305	1935	100	no	6	txStart-txEnd	5'UTR-3'UTR			20748440	20762745																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:19014638-21718005	0.1686																										86.28	-1.30437956536809	-1.89912490049618	-1.51976012533128	2.28676628831896	2.39892044394279					7625	HGNC:13144						4	1.5586e-06	3.5588e-04			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	SCARF2				NM_153334	7	20778873	20792112	13239	2607	100	no	14	txStart-txEnd	5'UTR-3'UTR			20778873	20792112						Van den Ende-Gupta syndrome, 600920 (3) AR		morbid:SCARF2	22:20778874-20792112															3	Van_den_Ende-Gupta_syndrome				dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:19014638-21718005	0.1686																								30	0	70.17	-1.42333559636086	-1.93669033911618	-1.61173791689534			van den Ende-Gupta syndrome	AR	Limited;Moderate;Strong;Supportive	20887961;20887961[PMID]_22140376[PMID];22140376;23808541;24478002;3808541	91179	HGNC:19869	613619	Van den Ende-Gupta syndrome, 600920 (3) AR	AR	yes		0	9.9980e-01				full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	KLHL22				NM_032775	4	20795805	20850082	54277	1905	100	no	7	txStart-txEnd	5'UTR-3'UTR			20795805	20850082																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:19014638-21718005	0.1686																										41.2	-1.60479766897668	-1.94085802577819	-1.599983320827	-0.00460568166698648	2.85964800561254					84861	HGNC:25888						2	4.2419e-01	7.0261e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	MED15				NM_001003891	3	20861896	20941906	80010	2367	100	no	18	txStart-txEnd	5'UTR-3'UTR			20861896	20941906																													dbVar	chr22:18934999-21466000	0.01				IMH	22:17036164-22613666;22:19014638-21718005	0.1686																										24.41				0.672972182845271	2.65389095774821					51586	HGNC:14248						0	9.9974e-01	9.6081e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	POM121L4P				NR_024592	1	21043842	21046009	2167	0	0	NA	1	txStart-txEnd	UTR			21043842	21046009																													dbVar	chr22:18934999-21466000;chr22:21027000-21048000	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																																																full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	TMEM191A				NR_026815	1	21055401	21058891	3490	0	0	NA	8	txStart-txEnd	UTR			21055401	21058891																													dbVar	chr22:18934999-21466000;chr22:21052000-21466000	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																																				84222	HGNC:25317											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	PI4KA				NM_058004	4	21061978	21213099	151121	6309	100	no	55	txStart-txEnd	5'UTR-3'UTR			21061978	21213099						Gastrointestinal defects and immunodeficiency syndrome 2, 619708 (3) AR;Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis, 616531 (3) AR;Spastic paraplegia 84, AR, 619621 (3) AR;Thrombophilia 10 due to heparin cofactor II deficiency, 612356 (3) AD		morbid:PI4KA;morbid:SERPIND1	22:21061979-21213099;22:21128401-21142008															8	PI4KA-related_disorder;Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis;Spastic_paraplegia_84,_autosomal_recessive				dbVar	chr22:18934999-21466000;chr22:21052000-21466000	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																										35.17				1.20573288011437	5.29477062168781	polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis	AR	Moderate;Strong	25855803;29738522;30614210;34415310;34415322	5297	HGNC:8983	600286	Gastrointestinal defects and immunodeficiency syndrome 2, 619708 (3) AR;Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis, 616531 (3) AR;Spastic paraplegia 84, AR, 619621 (3) AR	AR	yes		2	3.1234e-12	8.0407e-04			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	SERPIND1				NM_000185	4	21128400	21142008	13608	1500	100	no	5	txStart-txEnd	5'UTR-3'UTR			21128400	21142008						Thrombophilia 10 due to heparin cofactor II deficiency, 612356 (3) AD		morbid:SERPIND1	22:21128401-21142008																				dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21078735-21159481	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																										68.88	-1.06265755233802	-1.49456297636655	-1.03231231326932	-0.289055396385536	-0.349034099945665	heparin cofactor 2 deficiency	AD	Definitive;Limited;Strong	15337701;2647747;277130;8562924	3053	HGNC:4838	142360	Thrombophilia 10 due to heparin cofactor II deficiency, 612356 (3) AD	AD	yes		8	2.5137e-10	2.7955e-05			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	SNAP29				NM_004782	4	21213294	21245502	32208	777	100	no	5	txStart-txEnd	5'UTR-3'UTR			21213294	21245502						Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome, 609528 (3) AR		morbid:SNAP29	22:21213295-21245502															15	CEDNIK_syndrome;Hypomyelinating_leukodystrophy_2;Inborn_genetic_diseases				dbVar	chr22:18934999-21466000;chr22:21052000-21466000	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																								30		61.36	-1.39880243235913	-1.53414994058354	-1.19910660480315	1.58078637399342	-0.841707455415557	CEDNIK syndrome	AR	Strong;Supportive	15968592;15968592[PMID]_21073448[PMID];21073448;23231787;25473036;26747696	9342	HGNC:11133	604202	Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome, 609528 (3) AR	AR	yes		4	1.3567e-02	1.5166e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	CRKL				NM_005207	4	21271694	21308035	36341	912	100	no	3	txStart-txEnd	5'UTR-3'UTR			21271694	21308035																													dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																								1	0	4.35	-0.928255048107525	-1.20830830104818	-0.791505674827999	0.477351976371369	3.00980268645085	congenital heart disease		No Known Disease Relationship		1399	HGNC:2363						3	4.4604e-01	1.6345e-01			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	LINC01637				NR_110537	1	21311379	21318968	7589	0	0	NA	2	txStart-txEnd	UTR			21311379	21318968																													dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																																				101928891	HGNC:52424											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	AIFM3				NM_144704	3	21319459	21335647	16188	1818	100	no	21	txStart-txEnd	5'UTR-3'UTR			21319459	21335647																													dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																										38.59	-1.14442881641699	-1.26664892202732	-0.922844550293754	0.687283106386744	1.33036583543754					150209	HGNC:26398						5	1.9474e-14	1.9583e-10			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	LZTR1				NM_006767	4	21336585	21353321	16736	2523	100	no	21	txStart-txEnd	5'UTR-3'UTR			21336585	21353321		Schwannomatosis		CLN:906110;CLN:906111;CLN:917324	22:21344737-21344807;22:21345949-21346047;22:21348439-21348534	Noonan syndrome 10, 616564 (3) AD;Noonan syndrome 2, 605275 (3) AR;Schwannomatosis-2, susceptibility to, 615670 (3) AD		CLN:2871255;dbVar:nssv17171582;dbVar:nssv17971092;morbid:LZTR1	22:21336586-21353321;22:21336662-21337398;22:21336662-21351637;22:21348908-21348985			CLN:1349334;dbVar:nssv17974796	22:21337344-21337343;22:21337344-21337456											502	Autism_spectrum_disorder;Cardiovascular_phenotype;Emery-Dreifuss_muscular_dystrophy;Hereditary_cancer-predisposing_syndrome;Hypertrophic_cardiomyopathy_1;LZTR1-related_disorder;LZTR1-related_schwannomatosis;Male_infertility_with_azoospermia_or_oligozoospermia_due_to_single_gene_mutation;Noonan_syndrome;Noonan_syndrome_1;Noonan_syndrome_10;Noonan_syndrome_2;Noonan_syndrome_and_Noonan-related_syndrome;RASopathy;Schwannomatosis;See_cases;not_specified				dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																										32.82	-1.25119505668143	-1.28020537251329	-0.946080819110286	0.246895000414255	0.909128978651125	LZTR1-related schwannomatosis;Noonan syndrome;Noonan syndrome 10;Noonan syndrome 2;breast cancer;schwannomatosis	AD;AR	Definitive;Moderate;Strong;Supportive	15955931;16534111;23401320;24362817;25335493;25480913;25795793;25795793[PMID];26446362;274799;278971;287232;29469822;29959388;30368668;303983;30442762;30442766;30481304;30859559;31182298;37592023;37936555;38135892	8216	HGNC:6742	600574	Noonan syndrome 10, 616564 (3) AD;Noonan syndrome 2, 605275 (3) AR;(Schwannomatosis-2, susceptibility to), 615670 (3) AD	AD;AR	yes	yes	9	1.0211e-92	3.3832e-52			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	THAP7				NM_030573	3	21353392	21356407	3015	930	100	no	4	txStart-txEnd	5'UTR-3'UTR			21353392	21356407																													dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																										50.87	-1.44618961523547	-1.52989215323949	-1.19895133869269	-1.50983365445593	1.16392737773964					80764	HGNC:23190						4	1.3291e-02	2.9328e-02			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	THAP7-AS1				NR_027051	1	21356210	21364663	8453	0	0	NA	2	txStart-txEnd	UTR			21356210	21364663																													dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																																				439931	HGNC:41013											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	TUBA3FP				NR_003608	1	21362491	21368576	6085	0	0	NA	3	txStart-txEnd	UTR			21362491	21368576																													dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776;chr22:21358356-21370047;chr22:21360600-21369738	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																																				113691	HGNC:24067											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	P2RX6				NM_001394691	1	21369453	21382297	12844	1422	100	no	12	txStart-txEnd	5'UTR-3'UTR			21369453	21382297																													dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																										76.26	-1.8606303493434	-1.51336493990188	-1.2805127161158	-0.990180484365383	-0.63060581685217	myopathy	AR	Limited		9127	HGNC:8538						6	4.4680e-09	1.8785e-07			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	SLC7A4				NM_004173	3	21383006	21386850	3844	1908	100	no	5	txStart-txEnd	5'UTR-3'UTR			21383006	21386850																													dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																										74.02	-0.807902299547855	-1.26588610868392	-1.04316708587741	-0.387275128092876	-1.12481109733158					6545	HGNC:11062						6	2.8317e-07	1.0047e-04			full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	MIR649				NR_030379	1	21388464	21388561	97	0	0	NA	1	txStart-txEnd	UTR			21388464	21388561																										esv2760719	22:21383283-21845355	0.0100	dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																																				693234	HGNC:32905											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	P2RX6P				NR_002829	1	21396680	21398538	1858	0	0	NA	2	txStart-txEnd	UTR			21396680	21398538																										esv2760719	22:21383283-21845355	0.0100	dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																																				440799	HGNC:34076											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	LRRC74B				NM_001291006	2	21400234	21418457	18223	1179	100	no	10	txStart-txEnd	5'UTR-3'UTR			21400234	21418457																										esv2760719	22:21383283-21845355	0.0100	dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																																				400891	HGNC:34301											full=5
22_18894836_21464119_DEL_1	22	18894836	21464119	-2569284	DEL	Di George syndrom	Pathogenic	NA	split	q11.21	BCRP2				NR_037566	1	21457304	21476575	6815	0	0	NA	6	txStart-intron1	UTR	6098	3'	21457304	21464119																										esv2760719	22:21383283-21845355	0.0100	dbVar	chr22:18934999-21466000;chr22:21052000-21466000;chr22:21455959-21464881;chr22:21456000-21467000	0.01				IMH	22:17036164-22613666;22:19014638-21718005;22:21042853-21483407	0.1686																																				400892	HGNC:1015											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	full	p16.3-p16.1	ZNF595;ZNF718;ZNF876P;ZNF732;ZNF141;MIR571;ABCA11P;ZNF721;PIGG;TMEM271;LOC105374338;PDE6B;PDE6B-AS1;ATP5ME;MYL5;SLC49A3;PCGF3;PCGF3-AS1;CPLX1;GAK;TMEM175;DGKQ;SLC26A1;IDUA;FGFRL1;RNF212;LOC105374344;TMED11P;SPON2;LOC100130872;CTBP1-AS;CTBP1;CTBP1-DT;MAEA;UVSSA;NKX1-1;FAM53A;SLBP;TMEM129;TACC3;FGFR3;LETM1;NSD2;SCARNA22;NELFA;MIR943;NICOL1;NAT8L;POLN;HAUS3;MXD4;MIR4800;ZFYVE28;CFAP99;RNF4;FAM193A;TNIP2;SH3BP2;ADD1;MFSD10;NOP14-AS1;NOP14;GRK4;HTT-AS;HTT;MSANTD1;RGS12;HGFAC;DOK7;LRPAP1;LINC00955;LINC02171;ADRA2C;FAM86EP;OTOP1;TMEM128;LYAR;ZBTB49;NSG1;STX18;STX18-IT1;STX18-AS1;SNORD162;LOC101928279;LINC01396;MSX1;LOC101928306;CYTL1;STK32B;LINC01587;EVC2;EVC;CRMP1;MIR378D1;C4orf50;JAKMIP1;LOC128125818;JAKMIP1-DT;WFS1;PPP2R2C;MAN2B2;MRFAP1;LINC02482;MRFAP1L2;LINC02481;S100P;MRFAP1L1;BLOC1S4;KIAA0232;TBC1D14;LOC100129931;CFAP184;TADA2B;GRPEL1;LINC02447;SORCS2;MIR4798;PSAPL1;MIR4274;AFAP1-AS1;AFAP1;LOC389199;ABLIM2;MIR95;SH3TC1;HTRA3;LINC02517;ACOX3;TRMT44;GPR78;CPZ;LOC101928532;HMX1;FAM90A26;USP17L10;USP17L11;USP17L12;USP17L13;USP17L15;USP17L17;USP17L18;USP17L19;USP17L20;USP17L21;USP17L22;USP17L24;USP17L25;USP17L26;USP17L5;USP17L27;USP17L28;USP17L29;USP17L9P;USP17L30;USP17L6P		DEFB131A	155																ACACA (morbid/RE=mTL_miRNA);ACTC1 (morbid/RE=mTL_miRNA);ACVR1 (morbid/RE=mTL_miRNA);AGO2 (morbid/RE=mTL_miRNA);AKT1 (morbid/RE=mTL_miRNA);ANTXR2 (morbid/RE=mTL_miRNA);ARF1 (morbid/RE=mTL_miRNA);ARHGDIA (morbid/RE=mTL_miRNA);ARL6IP1 (morbid/RE=mTL_miRNA);ARPC1B (morbid/RE=mTL_miRNA);ATXN2 (morbid/RE=mTL_miRNA);CAD (morbid/RE=mTL_miRNA);CALM2 (morbid/RE=mTL_miRNA);CASK (morbid/RE=mTL_miRNA);CCNF (morbid/RE=mTL_miRNA);CELF2 (morbid/RE=mTL_miRNA);CEP55 (morbid/RE=mTL_miRNA);CIITA (morbid/RE=mTL_miRNA);CNTNAP2 (morbid/RE=mTL_miRNA);COL18A1 (morbid/RE=mTL_miRNA);COL1A1 (HI=3/morbid/RE=mTL_miRNA);CREBBP (HI=3/morbid/RE=mTL_miRNA);CTCF (HI=3/morbid/RE=mTL_miRNA);DAAM2 (morbid/RE=mTL_miRNA);DDR2 (morbid/RE=mTL_miRNA);DDX3X (HI=3/morbid/RE=mTL_miRNA);EDEM3 (morbid/RE=mTL_miRNA);EGLN1 (morbid/RE=mTL_miRNA);ELOVL5 (morbid/RE=mTL_miRNA);ESCO2 (morbid/RE=mTL_miRNA);FBXO22 (morbid/RE=mTL_miRNA);FICD (morbid/RE=mTL_miRNA);FLCN (HI=3/morbid/RE=mTL_miRNA);FLVCR1 (morbid/RE=mTL_miRNA);FOXC1 (HI=3/morbid/RE=mTL_miRNA);FOXP2 (HI=3/morbid/RE=mTL_miRNA);G6PD (morbid/RE=mTL_miRNA);GABRB2 (morbid/RE=mTL_miRNA);GATA6 (HI=3/morbid/RE=mTL_miRNA);GLI2 (HI=3/morbid/RE=mTL_miRNA);GLUL (morbid/RE=mTL_miRNA);GNAS (HI=3/morbid/RE=mTL_miRNA);HERC2 (morbid/RE=mTL_miRNA);HFE (morbid/RE=mTL_miRNA);IGF1R (HI=3/morbid/RE=mTL_miRNA);INF2 (morbid/RE=mTL_miRNA);ITM2B (morbid/RE=mTL_miRNA);KCNJ6 (morbid/RE=mTL_miRNA);LAMA4 (morbid/RE=mTL_miRNA);LMNB2 (morbid/RE=mTL_miRNA)...	Retinitis_pigmentosa_40;Retinitis_pigmentosa|Retinitis_pigmentosa_40	HP:0000547	CLN:28147;CLN:801370;dbVar:nssv15124412;dbVar:nssv15130095;dbVar:nssv15132150;dbVar:nssv15132411;dbVar:nssv15132589;dbVar:nssv15133497;dbVar:nssv15153559;dbVar:nssv15161020;dbVar:nssv16255833;dbVar:nssv16867404;dbVar:nssv17172169;dbVar:nssv17973849;dbVar:nssv18330201	4:127234-8667610;4:1420949-1836794;4:1737489-1808653;4:1770487-2303110;4:374558-745174;4:5567009-5587839;4:5785270-5803831;4:614356-2959936;4:619584-619584;4:619584-619655;4:619590-619662;4:72448-3848881;4:72448-5608810;4:85041-4597934;4:963689-2913553	4p16.3 terminal (Wolf-Hirschhorn syndrome) region;?Cataract 41, 116400 (3) AD;Deafness, AD 6;14;38, 600965 (3) AD;Wolfram syndrome 1, 222300 (3) AR;Wolfram-like syndrome, AD, 614296 (3) AD;Diabetes mellitus, noninsulin-dependent, association with, 125853 (3) AD;?Spermatogenic failure 62, 619673 (3) AR;Recombination rate QTL 1, 612042 (3);?Weyers acrofacial dysostosis, 193530 (3) AD;Ellis-van Creveld syndrome, 225500 (3) AR;Achondroplasia, 100800 (3) AD;Bladder cancer, somatic, 109800 (3);CATSHL syndrome, 610474 (3) AD,AR;Cervical cancer, somatic, 603956 (3);Colorectal cancer, somatic, 114500 (3);Crouzon syndrome with acanthosis nigricans, 612247 (3) AD;Hypochondroplasia, 146000 (3) AD;LADD syndrome 2, 620192 (3) AD;Muenke syndrome, 602849 (3) AD;Nevus, epidermal, somatic, 162900 (3);SADDAN, 616482 (3) AD;Spermatocytic seminoma, somatic, 273300 (3);Thanatophoric dysplasia, type I, 187600 (3) AD;Thanatophoric dysplasia, type II, 187601 (3) AD;Cherubism, 118400 (3) AD;Congenital disorder of glycosylation type 1EE with or without immunodeficiency, 621140 (3) AR;Developmental and epileptic encephalopathy 63, 617976 (3) AR;Ectodermal dysplasia 3, Witkop type, 189500 (3) AD;Orofacial cleft 5, 608874 (3) AD;Tooth agenesis, selective, 1, with or without orofacial cleft, 106600 (3) AD;Ellis-van Creveld syndrome, 225500 (3) AR;Weyers acrofacial dysostosis, 193530 (3) AD;Ellis-van_Creveld_syndrome|Curry-Hall_syndrome;Fetal akinesia deformation sequence 3, 618389 (3) AR;Myasthenic syndrome, congenital, 10, 254300 (3) AR;Fetal_akinesia_deformation_sequence_1|Congenital_myasthenic_syndrome_10|Fetal_akinesia_deformation_sequence_3;Huntington disease, 143100 (3) AD;Lopes-Maciel-Rodan syndrome, 617435 (3) AR;Hurler_syndrome;Hypotonia, ataxia, developmental delay, and tooth enamel defect syndrome, 617915 (3) AD;Mucopolysaccharidosis Ih, 607014 (3) AR;Mucopolysaccharidosis Ih;s, 607015 (3) AR;Mucopolysaccharidosis Is, 607016 (3) AR;Mucopolysaccharidosis_type_1;Myopia 23, AR, 615431 (3) AR;Neurodegeneration, childhood-onset, with multisystem involvement due to mitochondrial dysfunction, 620089 (3) AR;Neurodevelopmental disorder with or without hypotonia, seizures, and cerebellar atrophy, 616917 (3) AR;Blood group, EMM system, 619812 (3) AR;Night blindness, congenital stationary, AD 2, 163500 (3) AD;Retinitis pigmentosa-40, 613801 (3) AR;Oculoauricular syndrome, 612109 (3) AR;Rauch-Steindl syndrome, 619695 (3) AD;UV-sensitive syndrome 3, 614640 (3) AR	HP:0001989	CLN:1313135;CLN:2672009;CLN:2834164;CLN:3496433;CLN:961843;HI3:ISCA-37429;HI3:MSX1;HI3:NSD2;dbVar:nssv15119851;dbVar:nssv15121023;dbVar:nssv15121032;dbVar:nssv15121033;dbVar:nssv15121034;dbVar:nssv15121217;dbVar:nssv15121218;dbVar:nssv15121687;dbVar:nssv15122678;dbVar:nssv15123516;dbVar:nssv15124520;dbVar:nssv15127349;dbVar:nssv15130945;dbVar:nssv15131476;dbVar:nssv15131910;dbVar:nssv15132407;dbVar:nssv15132408;dbVar:nssv15132580;nssv15140019;dbVar:nssv15132953;dbVar:nssv15133489;dbVar:nssv15133490;dbVar:nssv15133634;dbVar:nssv15134794;dbVar:nssv15134826;dbVar:nssv15135086;dbVar:nssv15135107;dbVar:nssv15138367;dbVar:nssv15138802;dbVar:nssv15138941;dbVar:nssv15139309;dbVar:nssv15144315;dbVar:nssv15147286;dbVar:nssv15153560;dbVar:nssv15153562;dbVar:nssv15605891;dbVar:nssv15606061;dbVar:nssv15770186;dbVar:nssv15770321;dbVar:nssv16211870;dbVar:nssv16212102;dbVar:nssv16213046;dbVar:nssv16213271;dbVar:nssv16213451;dbVar:nssv16213572;dbVar:nssv16213637;dbVar:nssv16213802;dbVar:nssv16214176;dbVar:nssv16214333;dbVar:nssv16216714;dbVar:nssv16252200;dbVar:nssv16253953;dbVar:nssv16254938;dbVar:nssv16297119;dbVar:nssv16297131;dbVar:nssv16867405;dbVar:nssv17171362;dbVar:nssv17171376;dbVar:nssv17171391;dbVar:nssv17171923;dbVar:nssv17172168;dbVar:nssv17172572;dbVar:nssv17172573;dbVar:nssv17172574;dbVar:nssv17172955;dbVar:nssv17173143;dbVar:nssv17173159;dbVar:nssv17683620;dbVar:nssv17970729;dbVar:nssv17970732;dbVar:nssv17971217;dbVar:nssv17971266;dbVar:nssv17971361;dbVar:nssv17971686;dbVar:nssv17971734;dbVar:nssv17971799;dbVar:nssv17971904;dbVar:nssv17972056;dbVar:nssv17972166;dbVar:nssv17972432;dbVar:nssv17973718;nssv17974037;dbVar:nssv17973748;dbVar:nssv17974578;dbVar:nssv17975024;dbVar:nssv17976233;dbVar:nssv17976464;dbVar:nssv17976477;dbVar:nssv17976550;dbVar:nssv18326580;dbVar:nssv18786244;dbVar:nssv18786333;dbVar:nssv18787193;dbVar:nssv18788241;dbVar:nssv18788242;dbVar:nssv18788927;dbVar:nssv18788928;dbVar:nssv18790018;dbVar:nssv18790019;dbVar:nssv18790020;dbVar:nssv18790021;dbVar:nssv18790022;dbVar:nssv18790117;dbVar:nssv18790118;dbVar:nssv18790119;dbVar:nssv18790120;dbVar:nssv18790121;dbVar:nssv18790180;dbVar:nssv18790633;dbVar:nssv18791534;dbVar:nssv18791535;dbVar:nssv18791536;dbVar:nssv18791537;dbVar:nssv18791538;dbVar:nssv18791542;dbVar:nssv18830727;morbid:CPLX1;morbid:CTBP1;morbid:DOK7;morbid:EVC;morbid:EVC2;morbid:FGFR3;morbid:HMX1;morbid:HTRA3;morbid:HTT;morbid:IDUA;morbid:LETM1;morbid:LRPAP1;morbid:MAN2B2;morbid:MSX1;morbid:NSD2;morbid:PDE6B;morbid:PIGG;morbid:RNF212;morbid:SH3BP2;morbid:UVSSA;morbid:WFS1	4:1087097-1107352;4:1190912-2255904;4:1205233-1244143;4:1228529-2862002;4:129754-9371067;4:1305803-2460571;4:1340996-1381837;4:1619776-2181192;4:1701019-1975031;4:1784695-1919793;4:1795020-1810594;4:1813206-1857883;4:1827029-1860753;4:1873121-1983919;4:1902353-1950545;4:1941634-3879802;4:1966267-5913899;4:2009467-3080412;4:2200252-5710240;4:2364202-5447465;4:2820541-2842823;4:2909441-6871516;4:3076408-3245687;4:3085428-7591673;4:331569-2010962;4:3465094-3495238;4:3465104-3465298;4:3475114-3491543;4:3478201-3482971;4:3478271-3491403;4:3486271-3496209;4:3487104-3487370;4:3487247-3495248;4:3487257-3487395;4:3487257-3495238;4:3494467-3495228;4:3494950-3495048;4:3495083-3495158;4:3505339-3534149;4:3776785-7361544;4:388345-3872380;4:4859066-4864603;4:4861392-4865663;4:4861393-4865663;4:4861628-6304195;4:492999-533989;4:493126-2065854;4:493126-663896;4:493126-998181;4:493969-499930;4:494166-494410;4:499508-502759;4:501175-533158;4:502599-509994;4:507006-2214932;4:509743-533158;4:512203-518547;4:520809-1020391;4:524206-527790;4:5563147-5711294;4:5564166-5711275;4:5564566-5578191;4:5564566-5586587;4:5564566-5759862;4:5564576-5567096;4:5565511-5811251;4:5570162-5570377;4:5576403-5576509;4:5617140-5812774;4:5630277-5633769;4:5630336-5635926;4:5630338-5635927;4:5636440-5710337;4:5642222-5642585;4:5682978-5735172;4:5690875-5691080;4:5690875-5696238;4:5696053-5696238;4:5710004-5750043;4:5711925-5817031;4:5712928-5816032;4:5713109-5714221;4:5713159-5713318;4:5731025-5759862;4:5733143-5735172;4:5749726-5755670;4:5754554-5755670;4:5754554-5758099;4:5754554-5785501;4:5754599-5758602;4:5785270-5812774;4:5795340-5795484;4:5795341-5795483;4:5798730-5798979;4:5798740-5798969;4:5803668-5806578;4:5809919-5811348;4:619417-619883;4:6271577-6304992;4:6279184-6279434;4:629670-670728;4:646966-664571;4:647642-648677;4:651220-652826;4:652722-656427;4:652742-656407;4:6576916-6625089;4:660321-661795;4:664193-671649;4:72448-2110334;4:72448-2327204;4:72448-2691306;4:72448-3208040;4:72448-3563382;4:72448-3725774;4:72448-3787112;4:72448-4360445;4:72448-4889835;4:72448-5036718;4:72448-5214111;4:72448-5346537;4:72448-6245152;4:72448-7831152;4:75743-8672411;4:778745-819917;4:78471-3364946;4:8271481-8308825;4:85041-1921232;4:85041-2010262;4:85041-4407509;4:85041-7065426;4:85041-7845343;4:8613755-8873340;4:8868774-8873565;4:980776-981040;4:980776-981747;4:990308-992083;4:990309-992082;4:993498-998345;4:994391-998355;4:996510-998192;4:996511-998191;4:996511-998355							dbVar:nssv15165478;dbVar:nssv15148693;dbVar:nssv15149137;dbVar:nssv15125120;dbVar:nssv15134956;dbVar:nssv15136789;dbVar:nssv15148117;dbVar:nssv15165480;dbVar:nssv15164282;dbVar:nssv15164281;dbVar:nssv16215300;dbVar:nssv15145847;dbVar:nssv15132087;dbVar:nssv15132302;dbVar:nssv16254944;dbVar:nssv16207938;dbVar:nssv18830986;dbVar:nssv15150724;dbVar:nssv15777261;dbVar:nssv15151365;nssv18326348;dbVar:nssv15150634;dbVar:nssv15142189;dbVar:nssv15149870;nssv15151360;dbVar:nssv17649922;dbVar:nssv15147407;dbVar:nssv15146379;dbVar:nssv15146614;dbVar:nssv15148043;dbVar:nssv15146983;dbVar:nssv15146984;dbVar:nssv17976755;dbVar:nssv18841857;dbVar:nssv18841859;dbVar:nssv15164312;dbVar:nssv18841858;dbVar:nssv15149115	4:11526-191028879;4:12441-190904441;4:12441-49064044;4:33575-6632513;4:36425-1583294;4:36425-4098729;4:36425-47493612;4:49451-190915650;4:49451-190963766;4:49451-46339070;4:49451-49620898;4:51414-17799819;4:51414-3776843;4:51414-8224525;4:68346-2503033;4:68346-27423424;4:68346-34512694;4:68346-3713599;4:68346-4051616;4:68346-49089361;4:68346-66440622;4:68346-8731855;4:68347-190957473;4:69672-29702595;4:72448-21024037;4:72448-33132242;4:72448-39478764;4:78471-15627196;4:85041-22451641;4:85041-38701987;4:114785-47569569;4:507006-49064194;4:507006-57939396;4:1356925-49659859;4:2906395-42965249;4:6447049-20490737	4.87;4.87;18.96;99.42;97.73;99.14;19.60;4.87;4.87;20.09;18.76;52.40;99.46;99.75;99.87;34.00;27.00;99.91;99.92;18.97;14.01;99.96;4.87;31.38;44.38;28.13;23.60;59.76;41.52;24.05;19.51;18.25;15.43;16.59;16.14;20.82			dbVar:nssv18330206;dbVar:nssv16254942;dbVar:nssv15140532;dbVar:nssv15129769;dbVar:nssv15124924;dbVar:nssv15139152;dbVar:nssv15136460;dbVar:nssv15138769;dbVar:nssv15136794;dbVar:nssv15139111;dbVar:nssv15145893;dbVar:nssv15145934;dbVar:nssv15134095;dbVar:nssv15147322;dbVar:nssv8639431;dbVar:nssv15164280;dbVar:nssv16208663;dbVar:nssv15123439;dbVar:nssv15135098;dbVar:nssv15146364;dbVar:nssv15121022;dbVar:nssv15119845;dbVar:nssv16207942;dbVar:nssv15151269;dbVar:nssv15149902;dbVar:nssv15146789;dbVar:nssv17976873;dbVar:nssv15151109;dbVar:nssv17957198;dbVar:nssv15137532;dbVar:nssv15148266;dbVar:nssv17956854;dbVar:nssv17976719;dbVar:nssv16254943;dbVar:nssv16207937;dbVar:nssv15152168;dbVar:nssv15141218;dbVar:nssv16254952;dbVar:nssv15150277;dbVar:nssv17976824;dbVar:nssv16254953;dbVar:nssv15139308;dbVar:nssv16207941;dbVar:nssv15138820;nssv16207940;dbVar:nssv16207939;dbVar:nssv18330137;dbVar:nssv18330792;dbVar:nssv17649921;dbVar:nssv15150501;dbVar:nssv15146961;dbVar:nssv15146716;dbVar:nssv15147405;dbVar:nssv15146665;dbVar:nssv15146669;dbVar:nssv15146272;dbVar:nssv15146661;dbVar:nssv15146276;dbVar:nssv15774427;dbVar:nssv15151369;dbVar:nssv15145981;dbVar:nssv16207944	4:2-12785001;4:2-1328868;4:29215-1925508;4:33575-2356516;4:33575-4534781;4:36425-1957819;4:36425-3267258;4:36425-3883057;4:36425-3975771;4:36425-7361544;4:36425-9371067;4:37337-15870679;4:37337-3776839;4:37337-9370984;4:44021-19796182;4:49451-2010397;4:49451-24280482;4:49451-8872474;4:51414-1399150;4:56773-14501384;4:56773-2214932;4:56773-3872380;4:68346-10312798;4:68346-10336032;4:68346-13770107;4:68346-14614077;4:68346-1512353;4:68346-15973383;4:68346-1675143;4:68346-1999185;4:68346-20387231;4:68346-20587167;4:68346-20964575;4:68346-2137211;4:68346-2786584;4:68346-3891984;4:68346-4044985;4:68346-5046326;4:68346-5319773;4:68346-5579467;4:68346-5831521;4:68346-6056753;4:68346-6984507;4:68346-8731855;4:68346-9768141;4:68347-12369983;4:68347-2437290;4:68599-18912995;4:71553-15302739;4:71553-29006745;4:72448-10252290;4:72448-12900236;4:72448-15659658;4:72448-17279636;4:72448-28067931;4:78471-10337237;4:85041-17488365;4:3374196-13468480;4:4165335-33324781;4:4428131-17462172;4:5914110-17264668	72.74;94.62;97.77;98.37;99.16;98.17;98.91;99.09;99.11;99.52;99.62;58.73;99.09;99.63;47.08;98.87;38.38;99.75;98.51;64.38;99.32;99.61;90.78;90.57;67.87;63.93;99.78;58.47;99.80;99.83;45.77;45.32;44.50;99.84;99.88;99.92;99.92;99.94;99.94;99.94;99.94;99.95;99.95;99.96;95.87;75.60;99.86;49.35;61.06;32.14;91.34;72.49;59.66;54.04;33.21;90.58;53.36;59.41;17.85;37.92;30.46	1051	4p_partial_monosomy_syndrome;Abnormality_of_the_nervous_system;Achondroplasia;Autosomal_dominant_nonsyndromic_hearing_loss;Autosomal_dominant_nonsyndromic_hearing_loss_6;Autosomal_recessive_retinitis_pigmentosa;BLOOD_GROUP,_EMM_SYSTEM;Bell-shaped_thorax;Bowed_humerus;Camptodactyly-tall_stature-scoliosis-hearing_loss_syndrome;Carcinoma_of_colon;Cataract_41;Cervical_cancer;Colorectal_cancer;Cone-rod_dystrophy;Congenital_Stationary_Night_Blindness,_Dominant;Congenital_myasthenic_syndrome;Congenital_myasthenic_syndrome_10;Congenital_stationary_night_blindness_autosomal_dominant_2;Connective_tissue_disorder;Coronal_craniosynostosis;Craniosynostosis_syndrome;Crouzon_syndrome;Crouzon_syndrome-acanthosis_nigricans_syndrome;Curry-Hall_syndrome;DOK7-related_disorder;Developmental_and_epileptic_encephalopathy,_63;Diabetes_mellitus;Disproportionate_short-limb_short_stature;EVC-related_disorder;EVC2-related_disorder;Ellis-van_Creveld_syndrome;Emm-null_phenotype;Epidermal_nevus;FGFR3-related_chondrodysplasia;FGFR3-related_disorder;Facial_asymmetry;Familial_hypokalemia-hypomagnesemia;Femoral_bowing;Fetal_akinesia_deformation_sequence_1;Fetal_akinesia_deformation_sequence_3;Fibrous_dysplasia_of_jaw;Generalized_non-motor_(absence)_seizure;Germ_cell_tumor_of_testis;Global_developmental_delay;Growth_delay;Hamartoma;Huntington_disease;Hurler_syndrome;Hypochondroplasia;Hypoplastic_enamel-onycholysis-hypohidrosis_syndrome;Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome;IDUA-related_core_myopathy;IDUA-related_disorder;Inborn_genetic_diseases;Infantile_axial_hypotonia;Intellectual_disability,_autosomal_recessive_53;Interstitial_pneumonitis;Isolated_microphthalmia_6;Jeune_thoracic_dystrophy;LADD_syndrome_1;Lacrimoauriculodentodigital_syndrome_2;Larsen_syndrome;Leber_congenital_amaurosis;Lethal_short-limbed_short_stature;Levy-Hollister_syndrome;Lower_limb_undergrowth;MSX1-related_disorder;Malignant_tumor_of_testis;Malignant_tumor_of_urinary_bladder;Meniere_disease;Mucopolysaccharidosis;Mucopolysaccharidosis,_MPS-I-H/S;Mucopolysaccharidosis,_MPS-I-S;Mucopolysaccharidosis,_MPS-IV-A;Mucopolysaccharidosis_type_1;Muenke_syndrome;Multiple_myeloma;Myopia_23,_autosomal_recessive;NSD2-related_disorder;Narrow_chest;Neurodevelopmental_delay;Nonsyndromic_genetic_hearing_loss;Optic_atrophy;PDE6B-related_disorder;PIGG-related_disorder;Rare_genetic_deafness;Rauch-Steindl_syndrome;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_40;Rett_syndrome;SH3BP2-related_disorder;Saethre-Chotzen_syndrome;Seborrheic_keratosis;See_cases;Seizure;Severe_achondroplasia-developmental_delay-acanthosis_nigricans_syndrome;Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly;Short_ribs;Short_stature;Skeletal_dysplasia;Skeletal_dysplasia_with_acanthosis_nigricans;Small_for_gestational_age;Smith-Magenis_Syndrome-like;Spermatocytic_seminoma;Squamous_cell_lung_carcinoma;Syndromic_intellectual_disability;Thanatophoric_dysplasia;Thanatophoric_dysplasia,_type_2;Thanatophoric_dysplasia_type_1;Tooth_agenesis,_selective,_1;Type_2_diabetes_mellitus;Type_IV_short_rib_polydactyly_syndrome;Tyrosinase-positive_oculocutaneous_albinism;Unilateral_renal_agenesis;Upper_limb_undergrowth;WFS1-Related_Spectrum_Disorders;WFS1-related_disorder;WFS1-spectrum_disorder;Wolf-Hirschhorn_like_syndrome;Wolfram-like_syndrome;Wolfram_syndrome;Wolfram_syndrome_1;not_specified															4:73133-74170 gnomAD-SV_v2.1_DUP_4_10814;4:401040-401369 1000g;4:672926-673080 IMH;4:708497-709963 IMH;4:926067-926498 DDD:12703;4:1019871-1020098 IMH;4:1140854-1142502 IMH;4:1276634-1277595 IMH;4:1366480-1366685 IMH;4:1498576-1499359 IMH;4:2338395-2338550 IMH;4:2804337-2804397 gnomAD-SV_v2.1_DUP_4_10976;4:3059771-3069815 IMH;4:3060202-3069689 1000g;4:3331379-3331542 IMH;4:3446698-3451946 esv3599430;4:3467435-3474409 dgv972e214;4:3467915-3474537 IMH;4:3805045-3805107 gnomAD-SV_v2.1_DUP_4_11034;4:3970050-4129749 DDD:12785...	4:12282-121562 esv2763806;4:138871-148818 1000g;4:548827-549483 IMH;4:672946-673060 gnomAD-SV_v2.1_DUP_4_10858;4:897767-898589 IMH;4:970627-980630 dgv1450e212;4:1048391-1049187 IMH;4:1276082-1277452 IMH;4:1310419-1311557 IMH;4:1388217-1388850 IMH;4:1526044-1526309 IMH;4:2338396-2338717 IMH;4:3057000-3066000 gnomAD-SV_v2.1_DUP_4_10988;4:3059780-3069806 gnomAD-SV_v2.1_DUP_4_10989;4:3331378-3331542 gnomAD-SV_v2.1_DUP_4_10996;4:3446698-3451946 1000g;4:3467435-3474409 1000g;4:3467914-3474537 gnomAD-SV_v2.1_DUP_4_11003;4:3477856-3478071 IMH;4:3816480-3816984 IMH...			chr4:69000-224200 dbVar;chr4:90243-101974 dbVar;chr4:90308-102025 dbVar;4:91367-96776 1000g;chr4:114840-117344 dbVar;chr4:120580-120638 dbVar;chr4:127000-307000 dbVar;chr4:138218-138889 dbVar;chr4:141289-187522 dbVar;chr4:144992-145089 dbVar;chr4:154845-154912 dbVar;chr4:160511-164534 dbVar;chr4:194252-194740 dbVar;chr4:198780-199558 dbVar;chr4:212942-226976 dbVar;chr4:237038-239475 dbVar;chr4:244793-248873 dbVar;chr4:249822-249919 dbVar;chr4:260746-265323 dbVar;4:263958-264238 esv2665266...	chr4:67914-130131 dbVar;chr4:72279-204237 dbVar;4:90244-101974 1000g;chr4:91366-96776 dbVar;chr4:91373-96776 dbVar;chr4:119685-128703 dbVar;chr4:126571-135658 dbVar;chr4:128533-168126 dbVar;chr4:138870-148818 dbVar;chr4:141363-187545 dbVar;chr4:152769-183508 dbVar;4:156233-158501 nsv515005;chr4:160901-161000 dbVar;chr4:198668-199069 dbVar;4:209407-209857 DDD:12676;chr4:231372-238511 dbVar;chr4:244791-248846 dbVar;4:244794-248873 1000g;chr4:260724-264299 dbVar;chr4:260949-261120 dbVar...	0.445	0.425			4:9370857-9371011	MER5B				4:9357712-9469143;4:9357889-9408758;4:9357889-9408758;4:9362634-9457876			4:9199301-9371400	High Signal Region		3			1.29231994213647	1.20702378077388	1.11611247300207	3.21047317301589	5.41905620095129							194648;616918;180072;605032;610130;252800;612041;602618;614632;134934;604407;602952;610647;602104;102680;613004;610285;104225;142983;607261;604831;606201;618899;142992			yes	yes	0	1.0000e+00	1.0000e+00	1.9	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3C (155 genes, +0.90);5F (+0.00)	5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ZNF595				NM_001286052	2	53214	88096	16544	1709	92	yes	8	intron2-txEnd	CDS-3'UTR	12103	5'	71552	88096																										esv2763806	4:12282-121562	0.0100	dbVar	chr4:67914-130131;chr4:69000-224200	0.01																																93				-2.08573739588537	-0.684191486481177					152687	HGNC:27196						6	3.0550e-01	1.7753e-05			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ZNF718				NM_001039127	6	124382	157952	33570	1239	100	no	6	txStart-txEnd	5'UTR-3'UTR			124382	157952																													dbVar	chr4:69000-224200;chr4:72279-204237	0.01																																										255403	HGNC:26889											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ZNF876P				NR_027481	1	206388	249774	43386	0	0	NA	2	txStart-txEnd	UTR			206388	249774																													dbVar	chr4:127000-307000	0.01																																										642280	HGNC:32472											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ZNF732				NM_001137608	3	264463	299263	34800	1758	100	no	4	txStart-txEnd	5'UTR-3'UTR			264463	299263																													dbVar	chr4:127000-307000	0.01																																90.28	0.287750339613682	0.450417704041247	0.400052517453145	-1.34614550091757	-3.06736199452323					654254	HGNC:37138						7	9.8159e-02	1.3118e-09			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ZNF141				NM_003441	4	331602	378657	47055	1425	100	no	4	txStart-txEnd	5'UTR-3'UTR			331602	378657																																																													30		89.36	-0.117374836114298	-1.63248668554434	-1.22454087327741	0.724425471954094	-0.520531332003985	polydactyly, postaxial, type A6;postaxial polydactyly type A	AR	Limited;Supportive	23160277;26394607[PMID]_23160277[PMID]	7700	HGNC:12926	194648	?Polydactyly, postaxial, type A6, 615226 (3) AR	AR		yes	7	1.0393e-01	1.6189e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	MIR571				NR_030297	1	343945	344041	96	0	0	NA	1	txStart-txEnd	UTR			343945	344041																													dbVar	chr4:325395-351492	0.01																																										693156	HGNC:32827											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ABCA11P				NR_002451	2	419223	467998	48775	0	0	NA	3	txStart-txEnd	UTR			419223	467998																																																																									79963	HGNC:31											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ZNF721				NM_133474	4	433776	492945	59169	2772	100	no	3	txStart-txEnd	5'UTR-3'UTR			433776	492945																																																															96.95				-1.7693057852588	-2.76319865584382					170960	HGNC:29425						9	9.4789e-02	5.9729e-11			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	PIGG				NM_001127178	3	492998	533989	40991	2952	100	no	13	txStart-txEnd	5'UTR-3'UTR			492998	533989						Neurodevelopmental disorder with or without hypotonia, seizures, and cerebellar atrophy, 616917 (3) AR;Blood group, EMM system, 619812 (3) AR		dbVar:nssv17683620;dbVar:nssv17974578;dbVar:nssv17976464;dbVar:nssv17976477;dbVar:nssv18791534;dbVar:nssv18791536;dbVar:nssv18791537;dbVar:nssv18791538;morbid:PIGG	4:492999-533989;4:493969-499930;4:494166-494410;4:499508-502759;4:501175-533158;4:502599-509994;4:509743-533158;4:512203-518547;4:524206-527790															61	BLOOD_GROUP,_EMM_SYSTEM;Emm-null_phenotype;Inborn_genetic_diseases;Intellectual_disability,_autosomal_recessive_53;PIGG-related_disorder																																						73.18	0.208571775574472	-1.00399823985698	-0.667367098831187	1.49327706340249	-0.0905757042419409	intellectual disability, autosomal recessive 53	AR	Definitive;Strong	26996948;28581210;28771251	54872	HGNC:25985	616918	Neurodevelopmental disorder with or without hypotonia, seizures, and cerebellar atrophy, 616917 (3) AR;[Blood group, EMM system], 619812 (3) AR	AR	yes		5	5.4258e-15	8.7751e-07			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	TMEM271				NM_001362796	2	567668	570084	2416	1158	83	no	1	txStart-txEnd	5'UTR-3'UTR			567668	570084																																																																									112441426	HGNC:53639											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	LOC105374338				NR_148199	1	570956	578655	7699	0	0	NA	3	txStart-txEnd	UTR			570956	578655																																																																																					full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	PDE6B				NM_000283	4	619361	664571	45210	2565	100	no	22	txStart-txEnd	5'UTR-3'UTR			619361	664571		Retinitis_pigmentosa_40;Retinitis_pigmentosa|Retinitis_pigmentosa_40	HP:0000547	CLN:28147;CLN:801370;dbVar:nssv15161020	4:619584-619584;4:619584-619655;4:619590-619662	Night blindness, congenital stationary, AD 2, 163500 (3) AD;Retinitis pigmentosa-40, 613801 (3) AR		dbVar:nssv16213572;dbVar:nssv16213637;dbVar:nssv17171376;dbVar:nssv17171923;dbVar:nssv18788927;dbVar:nssv18788928;morbid:PDE6B	4:619417-619883;4:646966-664571;4:647642-648677;4:651220-652826;4:652722-656427;4:652742-656407;4:660321-661795															96	Autosomal_recessive_retinitis_pigmentosa;Cone-rod_dystrophy;Congenital_Stationary_Night_Blindness,_Dominant;Congenital_stationary_night_blindness_autosomal_dominant_2;Leber_congenital_amaurosis;PDE6B-related_disorder;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_40;See_cases;Tyrosinase-positive_oculocutaneous_albinism																																						31.26	-1.62508422066579	-0.147567114346182	-0.732640703348332	-0.18186725937295	-0.360251650665831	congenital stationary night blindness;congenital stationary night blindness autosomal dominant 2;retinitis pigmentosa;retinitis pigmentosa 40	AD;AR	Definitive;Limited;Strong;Supportive	12641462;17044014;19578023;20301590[PMID];22334370;22968130;24265693;24760071;24938718;25472526;26667666;28559085;30646425;8075643;8075643[PMID];8394174;8595886	5158	HGNC:8786	180072	Night blindness, congenital stationary, AD 2, 163500 (3) AD;Retinitis pigmentosa-40, 613801 (3) AR	AD;AR	yes		6	2.6155e-27	1.6257e-13			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	PDE6B-AS1				NR_183810	1	646693	648989	2296	0	0	NA	3	txStart-txEnd	UTR			646693	648989								dbVar:nssv17171376	4:647642-648677															12	Autosomal_recessive_retinitis_pigmentosa;Congenital_stationary_night_blindness_autosomal_dominant_2;Leber_congenital_amaurosis;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_40;See_cases																																																101928521	HGNC:40438											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ATP5ME				NM_007100	4	666224	668065	1841	210	100	no	4	txStart-txEnd	5'UTR-3'UTR			666224	668065																																																																									521	HGNC:846											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	MYL5				NM_001395441	1	668330	675817	7487	522	100	no	9	txStart-txEnd	5'UTR-3'UTR			668330	675817																																																															77.92	-2.62354415217069	-2.53125239294469	-2.47162789907313	-0.841325117744977	-1.07172517579562					4636	HGNC:7586						9	8.4023e-14	4.4299e-08			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	SLC49A3				NM_001294341	2	675617	682940	7323	1683	100	no	10	txStart-txEnd	5'UTR-3'UTR			675617	682940																																																																									84179	HGNC:26177											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	PCGF3				NM_001317836	3	699620	763877	64257	729	100	no	12	txStart-txEnd	5'UTR-3'UTR			699620	763877																																																															41.81	1.08104400698142	0.21167380707342	0.50450224433182	-1.15521787576548	2.22110482517757					10336	HGNC:10066						1	9.5326e-01	9.4340e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	PCGF3-AS1				NR_171661	1	754230	775637	21407	0	0	NA	3	txStart-txEnd	UTR			754230	775637																																																																									100129917	HGNC:56108											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	CPLX1				NM_006651	4	778744	819917	41173	405	100	no	4	txStart-txEnd	5'UTR-3'UTR			778744	819917						Developmental and epileptic encephalopathy 63, 617976 (3) AR		morbid:CPLX1	4:778745-819917															1	Developmental_and_epileptic_encephalopathy,_63																																						57.56	0.307891021887021	-0.276081088005473	-0.0592308346427654	-0.123982055433658	0.739036799993362	developmental and epileptic encephalopathy, 63;familial infantile myoclonic epilepsy	AR	Strong;Supportive	11163241;26539891;28422131;28422131[PMID]	10815	HGNC:2309	605032	Developmental and epileptic encephalopathy 63, 617976 (3) AR	AR	yes		2	8.2499e-01	7.9579e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	GAK				NM_005255	4	843064	926104	83040	3936	100	no	28	txStart-txEnd	5'UTR-3'UTR			843064	926104																																																															66.55	1.00920516918233	-1.32268830826731	-0.753758448502777	-1.09712093422474	-0.06853474623291					2580	HGNC:4113						1	5.1818e-03	9.7313e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	TMEM175				NM_032326	4	926247	952444	26197	1515	100	no	11	txStart-txEnd	5'UTR-3'UTR			926247	952444																																																															72.33	0.68130369659025	-0.684900012122083	-0.281672783681246	-0.335178666431938	-0.288196719712539					84286	HGNC:28709						6	3.0549e-09	4.3963e-04			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	DGKQ				NM_001347	4	952674	967357	14683	2829	100	no	23	txStart-txEnd	5'UTR-3'UTR			952674	967357																																																															68.02	0.720690705407562	-0.962987167732907	-0.540807434627598	-0.885541042446365	0.113301977907898					1609	HGNC:2856						3	1.7603e-09	1.1940e-03			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	SLC26A1				NM_022042	4	981444	987192	5748	2106	100	no	3	txStart-txEnd	5'UTR-3'UTR			981444	987192																								21	Hurler_syndrome;IDUA-related_disorder;Interstitial_pneumonitis;Mucopolysaccharidosis;Mucopolysaccharidosis,_MPS-I-H/S;Mucopolysaccharidosis,_MPS-I-S;Mucopolysaccharidosis_type_1;See_cases																																						74.45	0.0296456908307138	-0.811800830743971	-0.614175007315312	-0.960716353370505	-0.560975494729554	nephrolithiasis susceptibility caused by SLC26A1	AR	Limited;Moderate	24250268;27210743	10861	HGNC:10993	610130	?Hypersulfaturia, 620372 (3) AR;?Nephrolithiasis, calcium oxalate, 1, 167030 (3) AR	AR		yes	8	1.0564e-11	4.0130e-06			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	IDUA				NM_000203	5	980831	998352	17521	1962	100	no	14	txStart-txEnd	5'UTR-3'UTR			980831	998352						Hurler_syndrome;Mucopolysaccharidosis Ih, 607014 (3) AR;Mucopolysaccharidosis Ih;s, 607015 (3) AR;Mucopolysaccharidosis Is, 607016 (3) AR;Mucopolysaccharidosis_type_1		CLN:2672009;CLN:961843;dbVar:nssv16216714;dbVar:nssv18830727;morbid:IDUA	4:990308-992083;4:990309-992082;4:993498-998345;4:996510-998192;4:996511-998191															213	Familial_hypokalemia-hypomagnesemia;Hurler_syndrome;IDUA-related_core_myopathy;IDUA-related_disorder;Inborn_genetic_diseases;Interstitial_pneumonitis;Mucopolysaccharidosis;Mucopolysaccharidosis,_MPS-I-H/S;Mucopolysaccharidosis,_MPS-I-S;Mucopolysaccharidosis,_MPS-IV-A;Mucopolysaccharidosis_type_1;See_cases																																				30		69.73	-1.6058292542185	-1.19882139820352	-1.40825779214199	-0.0473365386141676	0.337473103766752	Hurler syndrome;Hurler-Scheie syndrome;Scheie syndrome;mucopolysaccharidosis type 1	AR	Definitive;Strong;Supportive	11735025;21394825;21480867;22976768;23917744;8680403[PMID]	3425	HGNC:5391	252800	Mucopolysaccharidosis Ih, 607014 (3) AR;Mucopolysaccharidosis Ih/s, 607015 (3) AR;Mucopolysaccharidosis Is, 607016 (3) AR	AR	yes		6	3.7599e-13	2.6418e-08			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	FGFRL1				NM_001004356	3	1005413	1020686	15273	1515	100	no	7	txStart-txEnd	5'UTR-3'UTR			1005413	1020686																													dbVar	chr4:993000-1180000	0.01																														0	0	61.34	0.15762668797229	-0.095835364724166	0.0269779205648351	-1.06125182633592	-0.304110728864919					53834	HGNC:3693						3	1.1908e-02	5.8219e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	RNF212				NM_001131034	4	1065265	1107352	42087	894	100	no	10	txStart-txEnd	5'UTR-3'UTR			1065265	1107352						?Spermatogenic failure 62, 619673 (3) AR;Recombination rate QTL 1, 612042 (3)		morbid:RNF212	4:1087097-1107352																				dbVar	chr4:993000-1180000	0.01																																88.48	-1.10887487197032	-0.266612828851805	-0.582493556461374	0.70441463212366	-0.142173437306223	spermatogenic failure 62	AR	Limited	25342176;31125047	285498	HGNC:27729	612041	?Spermatogenic failure 62, 619673 (3) AR;Recombination rate QTL 1, 612042 (3)	AR	yes	yes	4	1.5645e-03	1.2523e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	LOC105374344				NR_134676	1	1107426	1126763	19337	0	0	NA	3	txStart-txEnd	UTR			1107426	1126763																													dbVar	chr4:993000-1180000	0.01																																																						full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	TMED11P				NR_033768	1	1108984	1116952	7968	0	0	NA	4	txStart-txEnd	UTR			1108984	1116952																													dbVar	chr4:993000-1180000	0.01																																																						full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	SPON2				NM_001199021	2	1160719	1202632	41913	996	100	no	8	txStart-txEnd	5'UTR-3'UTR			1160719	1202632																																																															77.93	0.386184284132793	-0.507819648222944	-0.233252267365632	0.982292085246316	0.77606556285772					10417	HGNC:11253						9	2.6609e-15	1.0881e-06			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	LOC100130872				NR_024569	1	1189570	1202750	13180	0	0	NA	4	txStart-txEnd	UTR			1189570	1202750																																																																																					full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	CTBP1-AS				NR_104331	1	1203907	1212379	8472	0	0	NA	6	txStart-txEnd	UTR			1203907	1212379																								1	Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome;Inborn_genetic_diseases																																																285463	HGNC:48337											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	CTBP1				NM_001377186	1	1205232	1242918	37686	1326	100	no	9	txStart-txEnd	5'UTR-3'UTR			1205232	1242918																								1	Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome;Inborn_genetic_diseases																																						30.46	0.372261467334061	-0.687680790971782	-0.398820302991302	-0.219318263143712	4.00265992091985	hypotonia, ataxia, developmental delay, and tooth enamel defect syndrome	AD	Strong	12101226;26480814;27094857;28408745;28955726;30356033;31041561;32075774;36341169;9524128	1487	HGNC:2494	602618	Hypotonia, ataxia, developmental delay, and tooth enamel defect syndrome, 617915 (3) AD	AD	yes		1	9.8442e-01	9.7976e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	CTBP1-DT				NR_033339	1	1243227	1246795	3568	0	0	NA	2	txStart-txEnd	UTR			1243227	1246795																																																																									92070	HGNC:28307											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	MAEA				NM_001017405	3	1283678	1333925	50247	1191	100	no	9	txStart-txEnd	5'UTR-3'UTR			1283678	1333925																																																															7.13	0.506320833777115	-1.33825481458672	-0.894129278429717	-0.194585519191658	3.59552380294204					10296	HGNC:13731						2	2.2741e-01	8.4486e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	UVSSA				NM_001317934	2	1340995	1381837	40842	2130	100	no	14	txStart-txEnd	5'UTR-3'UTR			1340995	1381837						UV-sensitive syndrome 3, 614640 (3) AR		morbid:UVSSA	4:1340996-1381837															2																																					30		81.41				-1.108132588085	-3.07621828146639	UV-sensitive syndrome;UV-sensitive syndrome 3	AR	Strong;Supportive	22466610;22466610[PMID]_22466611[PMID]_22466612[PMID]	57654	HGNC:29304	614632	UV-sensitive syndrome 3, 614640 (3) AR	AR	yes		7	5.4127e-25	8.8875e-14			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	NKX1-1				NM_001290079	1	1396719	1400230	3511	1347	100	no	2	txStart-txEnd	5'UTR-3'UTR			1396719	1400230																																																															80.2				2.60422559153241	2.66896012411798					54729	HGNC:24975						3	7.1465e-01	1.8842e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	FAM53A				NM_001174070	3	1641613	1686040	44427	1197	100	no	5	txStart-txEnd	5'UTR-3'UTR			1641613	1686040																																																															86.49				-0.576730190868019	-0.56780381579822					152877	HGNC:31860						6	3.5705e-03	3.0070e-05			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	SLBP				NM_006527	4	1694457	1714046	19589	813	100	no	8	txStart-txEnd	5'UTR-3'UTR			1694457	1714046																													dbVar	chr4:1663278-1724970	0.01																																41.08	-0.996144409589105	-0.44060461568473	-0.660904930034766	-0.443208130978936	0.50373477013136					7884	HGNC:10904						4	6.8148e-02	5.1566e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	TMEM129				NM_001127266	2	1717678	1723050	5372	1089	100	no	4	txStart-txEnd	5'UTR-3'UTR			1717678	1723050																													dbVar	chr4:1663278-1724970	0.01																																60.14				1.8774465029651	0.292414150336672					92305	HGNC:25137						8	2.3074e-11	1.5746e-06			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	TACC3				NM_006342	3	1723247	1746898	23651	2517	100	no	16	txStart-txEnd	5'UTR-3'UTR			1723247	1746898																																																															92.5	-0.738565549612952	-1.04002887445022	-0.98783763752124	-1.00228696058413	-1.35276544118498					10460	HGNC:11524						3	2.7082e-07	9.1952e-02			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	FGFR3				NM_001163213	2	1795019	1810594	15575	2427	100	no	18	txStart-txEnd	5'UTR-3'UTR			1795019	1810594						Achondroplasia, 100800 (3) AD;Bladder cancer, somatic, 109800 (3);CATSHL syndrome, 610474 (3) AD,AR;Cervical cancer, somatic, 603956 (3);Colorectal cancer, somatic, 114500 (3);Crouzon syndrome with acanthosis nigricans, 612247 (3) AD;Hypochondroplasia, 146000 (3) AD;LADD syndrome 2, 620192 (3) AD;Muenke syndrome, 602849 (3) AD;Nevus, epidermal, somatic, 162900 (3);SADDAN, 616482 (3) AD;Spermatocytic seminoma, somatic, 273300 (3);Thanatophoric dysplasia, type I, 187600 (3) AD;Thanatophoric dysplasia, type II, 187601 (3) AD		morbid:FGFR3	4:1795020-1810594															39	Abnormality_of_the_nervous_system;Achondroplasia;Bell-shaped_thorax;Bowed_humerus;Camptodactyly-tall_stature-scoliosis-hearing_loss_syndrome;Carcinoma_of_colon;Cervical_cancer;Colorectal_cancer;Connective_tissue_disorder;Coronal_craniosynostosis;Craniosynostosis_syndrome;Crouzon_syndrome;Crouzon_syndrome-acanthosis_nigricans_syndrome;Disproportionate_short-limb_short_stature;Epidermal_nevus;FGFR3-related_chondrodysplasia;FGFR3-related_disorder;Facial_asymmetry;Femoral_bowing;Generalized_non-motor_(absence)_seizure;Germ_cell_tumor_of_testis;Growth_delay;Hamartoma;Hypochondroplasia;Inborn_genetic_diseases;Infantile_axial_hypotonia;LADD_syndrome_1;Lacrimoauriculodentodigital_syndrome_2;Larsen_syndrome;Lethal_short-limbed_short_stature;Levy-Hollister_syndrome;Lower_limb_undergrowth;Malignant_tumor_of_testis;Malignant_tumor_of_urinary_bladder;Muenke_syndrome;Multiple_myeloma;Narrow_chest;Neurodevelopmental_delay;Saethre-Chotzen_syndrome;Seborrheic_keratosis;See_cases;Seizure;Severe_achondroplasia-developmental_delay-acanthosis_nigricans_syndrome;Short_ribs;Short_stature;Skeletal_dysplasia;Skeletal_dysplasia_with_acanthosis_nigricans;Small_for_gestational_age;Spermatocytic_seminoma;Squamous_cell_lung_carcinoma;Thanatophoric_dysplasia;Thanatophoric_dysplasia,_type_2;Thanatophoric_dysplasia_type_1;Unilateral_renal_agenesis;Upper_limb_undergrowth;not_specified																																				0	0	6.4	-0.683349552436101	-0.392116289350703	-0.538573860699497	-2.22163439002498	1.36559781959522	Crouzon syndrome-acanthosis nigricans syndrome;LADD syndrome;LADD syndrome 1;Muenke syndrome;achondroplasia;camptodactyly-tall stature-scoliosis-hearing loss syndrome;hypochondroplasia;isolated brachycephaly;isolated plagiocephaly;severe achondroplasia-developmental delay-acanthosis nigricans syndrome;thanatophoric dysplasia type 1;thanatophoric dysplasia type 2	AD;AR;sD	Definitive;Limited;Moderate;Strong;Supportive	10053006;10053006[PMID]_18076102[PMID];10671061;10696568;10914960[PMID];11406607;11467490;15909185;16441300;16501574;16501574[PMID];17033969;17033969[PMID]_24864036[PMID];18076102;18818193;194190;19449430;20301540[PMID];20301588[PMID]_20301628[PMID]_21438135[PMID];20301628[PMID];20301650[PMID]_23149434[PMID];21536014;23149434[PMID];24864036;27139183;28249712;28483234;7493034;7670477;7773297;7847369;7913883;8078586;8630492;8640234;8845844;8880573;8880574;9042914;9279753;9300656;9450868;9580776	2261	HGNC:3690	134934	Achondroplasia, 100800 (3) AD;Bladder cancer, somatic, 109800 (3);CATSHL syndrome, 610474 (3) AD,AR;Cervical cancer, somatic, 603956 (3);Colorectal cancer, somatic, 114500 (3);Crouzon syndrome with acanthosis nigricans, 612247 (3) AD;Hypochondroplasia, 146000 (3) AD;LADD syndrome 2, 620192 (3) AD;Muenke syndrome, 602849 (3) AD;Nevus, epidermal, somatic, 162900 (3);SADDAN, 616482 (3) AD;Spermatocytic seminoma, somatic, 273300 (3);Thanatophoric dysplasia, type I, 187600 (3) AD;Thanatophoric dysplasia, type II, 187601 (3) AD	AD;AD,AR	yes		3	1.6432e-05	2.9091e-03			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	LETM1				NM_012318	3	1813205	1857883	44678	2220	100	no	14	txStart-txEnd	5'UTR-3'UTR			1813205	1857883						Neurodegeneration, childhood-onset, with multisystem involvement due to mitochondrial dysfunction, 620089 (3) AR		morbid:LETM1	4:1813206-1857883																																																				0	0	63.78	0.214548231055587	-0.175454101774909	-0.0279109913872425	-1.46983950545222	1.90036967420169	neurodegeneration, childhood-onset, with multisystem involvement due to mitochondrial dysfunction;neurodevelopmental disorder	AR	Moderate;Strong	26960370;27287194;30378700;30773800;36055214	3954	HGNC:6556	604407	Neurodegeneration, childhood-onset, with multisystem involvement due to mitochondrial dysfunction, 620089 (3) AR	AR	yes		3	1.2141e-06	8.1055e-02			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	NSD2				NM_001042424	3	1873119	1983919	110800	4098	100	no	22	txStart-txEnd	5'UTR-3'UTR			1873119	1983919						Rauch-Steindl syndrome, 619695 (3) AD		HI3:NSD2;morbid:NSD2	4:1873121-1983919;4:1902353-1950545															32	4p_partial_monosomy_syndrome;Global_developmental_delay;Inborn_genetic_diseases;NSD2-related_disorder;Neurodevelopmental_delay;Rauch-Steindl_syndrome;Syndromic_intellectual_disability;Wolf-Hirschhorn_like_syndrome																																				3	0							Rauch-Steindl syndrome;Wolf-Hirschhorn syndrome;syndromic intellectual disability	AD	Definitive;Strong	19483677;26633542;28600779;29760529;29892088;30244530;30345613;31171569;9618163	7468	HGNC:12766	602952	Rauch-Steindl syndrome, 619695 (3) AD	AD	yes							full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	SCARNA22				NR_003004	1	1976362	1976487	125	0	0	NA	1	txStart-txEnd	UTR			1976362	1976487																																																																									677770	HGNC:32580											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	NELFA				NM_005663	5	1984449	2010701	26252	1587	100	no	11	txStart-txEnd	5'UTR-3'UTR			1984449	2010701																																																													0	0	62.86	0.0789021097033232	0.586448065563417	0.486612084123194	-0.704500724266535	2.35326609523799					7469	HGNC:12768						2	1.3469e-01	1.6689e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	MIR943				NR_030641	1	1988110	1988204	94	0	0	NA	1	txStart-txEnd	UTR			1988110	1988204																																																																									100126332	HGNC:33689											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	NICOL1				NM_001141936	3	2043721	2045691	1970	288	100	no	4	txStart-txEnd	5'UTR-3'UTR			2043721	2045691																																																																									401115	HGNC:34437											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	NAT8L				NM_178557	4	2061053	2070816	9763	909	100	no	3	txStart-txEnd	5'UTR-3'UTR			2061053	2070816																																																													30	0	40.87	0.098456637925367	0.547035422647778	0.555421231184509	-0.17378562567541	2.72200675038499	N-acetylaspartate deficiency	AR	Limited	11310630;15328569;16802720;19807691;26511242	339983	HGNC:26742	610647	?N-acetylaspartate deficiency, 614063 (3) AR	AR		yes	2	8.6458e-01	3.2468e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	POLN				NM_181808	4	2073644	2243848	170204	2703	100	no	26	txStart-txEnd	5'UTR-3'UTR			2073644	2243848																																																															74.11	1.28008098953073	-0.213680271829885	0.298427608261686	0.0230368692484615	-1.08931776314455					353497	HGNC:18870						7	9.4880e-41	2.9966e-32			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	HAUS3				NM_001303143	2	2230075	2243848	13773	1812	100	no	6	txStart-txEnd	5'UTR-3'UTR			2230075	2243848																																																															46.58	0.701548607121356	-0.365908352795815	0.0332648069020548	-0.527208917402428	-2.11601983727089					79441	HGNC:28719						6	1.2992e-09	8.8992e-07			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	MXD4				NM_006454	3	2249158	2263836	14678	630	100	no	6	txStart-txEnd	5'UTR-3'UTR			2249158	2263836																																																															51.38	0.152551047660427	-0.352633837012323	-0.186392860565083	-0.362920265024982	1.29214097300775					10608	HGNC:13906						2	7.7635e-01	8.9694e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	MIR4800				NR_039964	1	2251803	2251883	80	0	0	NA	1	txStart-txEnd	UTR			2251803	2251883																																																																									100616358	HGNC:41877											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ZFYVE28				NM_020972	3	2271323	2420372	149049	2664	100	no	13	txStart-txEnd	5'UTR-3'UTR			2271323	2420372																																																															65.21	-0.00272190900027315	-0.788064481059993	-0.590406277851698	-0.457051628812482	-0.248524904723244					57732	HGNC:29334						2	7.2340e-02	8.8846e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	CFAP99				NM_001193282	4	2420681	2464729	44048	1941	100	no	16	txStart-txEnd	5'UTR-3'UTR			2420681	2464729																																																																									402160	HGNC:51180											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	RNF4				NM_002938	5	2470832	2517584	46752	573	100	no	8	txStart-txEnd	5'UTR-3'UTR			2470832	2517584																																																															46.49	0.675314441657105	-0.278968200252929	0.0738937137831485	0.142993789011855	1.01071894719792					6047	HGNC:10067						2	7.9973e-01	6.2895e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	FAM193A				NM_001366318	2	2538373	2734300	195927	4548	100	no	21	txStart-txEnd	5'UTR-3'UTR			2538373	2734300																																																															63.75	0.047435784931723	0.578303279433319	0.446297134803958	-0.738211104213101	1.24551033534962					8603	HGNC:16822						0	9.9993e-01	9.9782e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	TNIP2				NM_024309	4	2743374	2758063	14689	1290	100	no	6	txStart-txEnd	5'UTR-3'UTR			2743374	2758063																																																															81.36	0.00376891322505335	0.175301121417126	0.165045961017247	0.837642525932054	1.18082169671465					79155	HGNC:19118						3	1.5926e-03	2.9733e-06			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	SH3BP2				NM_001145856	2	2819896	2842823	22927	1857	100	no	13	txStart-txEnd	5'UTR-3'UTR			2819896	2842823						Cherubism, 118400 (3) AD		morbid:SH3BP2	4:2820541-2842823															8	Fibrous_dysplasia_of_jaw;SH3BP2-related_disorder																																						63.94	0.0147924168443993	-0.755069155443864	-0.557230884715189	-0.774788091773142	0.0928341710725898	cherubism	AD	Strong;Supportive	11381256;12900899;17147794;17321449;17368082;19038533;22153076;22153077;22640988;24382142;24916406;26064398;NULL	6452	HGNC:10825	602104	Cherubism, 118400 (3) AD	AD	yes		6	1.1560e-11	3.1019e-03			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ADD1				NM_001354761	2	2845570	2931789	86219	2400	100	no	16	txStart-txEnd	5'UTR-3'UTR			2845570	2931789																																			IMH	4:2823210-17706072	0.0144																										46.84	0.415100440885564	-0.0353582367682211	0.160620922610348	1.55687904782076	0.599493733703596					118	HGNC:243	102680	(Hypertension, essential, salt-sensitive), 145500 (3) Multifactorial	Multifactorial		yes	1	9.8830e-01	6.1130e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	MFSD10				NM_001410703	1	2932293	2936552	4259	1443	100	no	12	txStart-txEnd	5'UTR-3'UTR			2932293	2936552																																			IMH	4:2823210-17706072	0.0144																										74.85	0.411355639726539	0.128499204561582	0.297239579860913	-3.22135273058939	-2.0505953640051					10227	HGNC:16894						7	7.3331e-11	3.0178e-07			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	NOP14-AS1				NR_015453	2	2937272	2952805	15533	0	0	NA	4	txStart-txEnd	UTR			2937272	2952805																																			IMH	4:2823210-17706072	0.0144																																				317648	HGNC:20205											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	NOP14				NM_001291978	2	2939662	2965133	25471	2574	100	no	18	txStart-txEnd	5'UTR-3'UTR			2939662	2965133																																			IMH	4:2823210-17706072	0.0144																										76.1				-0.287444310372334	-1.08649031284551					8602	HGNC:16821						2	2.1363e-06	1.7449e-02			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	GRK4				NM_182982	3	2965297	3042487	77190	1737	100	no	16	txStart-txEnd	5'UTR-3'UTR			2965297	3042487																																			IMH	4:2823210-17706072	0.0144																										77.79	-1.99297870008351	-1.29609278714656	-1.46605851541056	-0.226834639209249	-0.865456519909477					2868	HGNC:4543						6	1.6286e-15	5.6904e-07			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	HTT-AS				NR_045414	2	3047865	3076351	28486	0	0	NA	4	txStart-txEnd	UTR			3047865	3076351																																			IMH	4:2823210-17706072	0.0144																																				100750326	HGNC:37118											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	HTT				NM_002111	8	3076407	3245687	169280	9429	100	no	67	txStart-txEnd	5'UTR-3'UTR			3076407	3245687						Huntington disease, 143100 (3) AD;Lopes-Maciel-Rodan syndrome, 617435 (3) AR		morbid:HTT	4:3076408-3245687															4	Huntington_disease										IMH	4:2823210-17706072	0.0144																										7.59	-0.672019089975884	1.20702378077388	0.455761090475751	-0.292338464564844	2.75557960790302	Huntington disease;Lopes-Maciel-Rodan syndrome;juvenile Huntington disease	AD;AR	Definitive;Limited;Strong;Supportive	11264541;17181545[PMID];20301482[PMID]_21566141[PMID];248284;26740508;27329733;7550343;7618107;7774020;8401587;8458085	3064	HGNC:4851	613004	Huntington disease, 143100 (3) AD;Lopes-Maciel-Rodan syndrome, 617435 (3) AR	AD;AR	yes	yes	0	1.0000e+00	1.0000e+00			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	MSANTD1				NM_001042690	2	3250885	3258340	7455	837	100	no	3	txStart-txEnd	5'UTR-3'UTR			3250885	3258340																																			IMH	4:2823210-17706072	0.0144																										38.82				0.0606051954062481	0.881143579184346					345222	HGNC:33741						2	8.0456e-01	3.2217e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	RGS12				NM_001394155	1	3287617	3441640	154023	4344	100	no	18	txStart-txEnd	5'UTR-3'UTR			3287617	3441640																																			IMH	4:2823210-17706072	0.0144																										76.68	0.764664139864726	0.714317785060336	0.923141277111761	-0.25533666429365	0.674471945471649					6002	HGNC:9994						3	4.0922e-09	5.6037e-04			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	HGFAC				NM_001297439	2	3443694	3451213	7519	1989	100	no	15	txStart-txEnd	5'UTR-3'UTR			3443694	3451213																																			IMH	4:2823210-17706072	0.0144																										76.94	-2.62354415217069	0.291115018050139	-2.47162789907313	-2.1421417021426	-1.44878648893363					3083	HGNC:4894						4	1.9843e-08	5.2082e-07			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	DOK7				NM_001301071	2	3465032	3503209	38177	1827	100	no	10	txStart-txEnd	5'UTR-3'UTR			3465032	3503209						Fetal akinesia deformation sequence 3, 618389 (3) AR;Myasthenic syndrome, congenital, 10, 254300 (3) AR;Fetal_akinesia_deformation_sequence_1|Congenital_myasthenic_syndrome_10|Fetal_akinesia_deformation_sequence_3	HP:0001989	CLN:2834164;CLN:3496433;dbVar:nssv15130945;dbVar:nssv15131476;dbVar:nssv15770186;dbVar:nssv16213451;dbVar:nssv16214333;dbVar:nssv17971686;dbVar:nssv17972166;dbVar:nssv17976550;dbVar:nssv18786333;dbVar:nssv18790180;morbid:DOK7	4:3465094-3495238;4:3465104-3465298;4:3475114-3491543;4:3478201-3482971;4:3478271-3491403;4:3486271-3496209;4:3487104-3487370;4:3487247-3495248;4:3487257-3487395;4:3487257-3495238;4:3494467-3495228;4:3494950-3495048;4:3495083-3495158															76	Congenital_myasthenic_syndrome;Congenital_myasthenic_syndrome_10;DOK7-related_disorder;Fetal_akinesia_deformation_sequence_1;Fetal_akinesia_deformation_sequence_3;Inborn_genetic_diseases;Rett_syndrome;See_cases										IMH	4:2823210-17706072	0.0144																								30		75.35				-2.68253992069213	-3.72411383897722	congenital myasthenic syndrome 10;fetal akinesia deformation sequence 1;fetal akinesia deformation sequence 3;postsynaptic congenital myasthenic syndrome	AR	Definitive;Limited;Strong;Supportive	16794080;16917026;17439981;18626973;19261599;19261599[PMID];20147321;20301347[PMID];29395672;31453852;32360404	285489	HGNC:26594	610285	Fetal akinesia deformation sequence 3, 618389 (3) AR;Myasthenic syndrome, congenital, 10, 254300 (3) AR	AR	yes		5	1.0263e-04	4.8084e-03			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	LRPAP1				NM_002337	4	3505338	3534149	28811	1074	100	no	8	txStart-txEnd	5'UTR-3'UTR			3505338	3534149						Myopia 23, AR, 615431 (3) AR		morbid:LRPAP1	4:3505339-3534149															2	Myopia_23,_autosomal_recessive										IMH	4:2823210-17706072	0.0144																								30		81.97	-0.901439467568047	-1.0008332959639	-1.03424805406881	-0.233147203181143	-1.38131789177637	myopia 23, autosomal recessive	AR	Limited;Strong	23830514;25525168	4043	HGNC:6701	104225	Myopia 23, AR, 615431 (3) AR	AR	yes		6	4.4951e-07	6.0843e-03			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	LINC00955				NR_040045	1	3578595	3592712	14117	0	0	NA	3	txStart-txEnd	UTR			3578595	3592712																																			IMH	4:2823210-17706072	0.0144																										93.6										285492	HGNC:26644						8	4.5772e-01				full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	LINC02171				NR_034136	1	3675319	3679582	4263	0	0	NA	3	txStart-txEnd	UTR			3675319	3679582																																			IMH	4:2823210-17706072	0.0144																																				100133461	HGNC:53033											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ADRA2C				NM_000683	4	3768111	3770253	2142	1389	72	no	1	txStart-txEnd	5'UTR-3'UTR			3768111	3770253																																			IMH	4:2823210-17706072	0.0144																										68.35				3.21047317301589	5.41905620095129					152	HGNC:283						3	5.0159e-01	6.4595e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	FAM86EP				NR_130740	1	3943486	3957155	13669	0	0	NA	4	txStart-txEnd	UTR			3943486	3957155																													dbVar	chr4:3894913-4168551;chr4:3897463-4171386;chr4:3906095-3993252;chr4:3923039-4103069	0.01				IMH	4:2823210-17706072	0.0144																																				348926	HGNC:28017											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	OTOP1				NM_177998	3	4190452	4228656	38204	1839	100	no	6	txStart-txEnd	5'UTR-3'UTR			4190452	4228656																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										80.7	0.337011959699387	0.333342940376347	0.48201697995522	0.532976598896309	-0.342636515952079					133060	HGNC:19656						9	4.8437e-24	7.3147e-16			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	TMEM128				NM_001297551	2	4237268	4249950	12682	498	100	no	5	txStart-txEnd	5'UTR-3'UTR			4237268	4249950																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										73.9				0.701580942281967	-0.111669494459405					85013	HGNC:28201						8	1.9994e-04	1.1006e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	LYAR				NM_017816	3	4269427	4291881	22454	1140	100	no	10	txStart-txEnd	5'UTR-3'UTR			4269427	4291881																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										65.63	-1.04982790537607	0.837810587333259	0.0401032398207032	0.075048187998812	-0.816993645198656					55646	HGNC:26021						5	3.7580e-07	1.3245e-04			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	ZBTB49				NM_001330625	2	4291977	4323510	31533	2298	100	no	8	txStart-txEnd	5'UTR-3'UTR			4291977	4323510																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										89.21	-0.48130989574319	0.452744382601107	0.130333981724112	-0.597063638061633	0.18239534186363					166793	HGNC:19883						4	1.3752e-08	9.1642e-03			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	NSG1				NM_001382227	1	4388828	4420785	31957	585	100	no	6	txStart-txEnd	5'UTR-3'UTR			4388828	4420785																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																											-0.025549754331335	0.153242929586267	0.138678963648336	0.898629456776545	-0.214997258794035					27065	HGNC:18790						7	8.8286e-03	4.5383e-03			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3-p16.2	STX18				NM_016930	4	4420694	4543775	123081	1008	100	no	11	txStart-txEnd	5'UTR-3'UTR			4420694	4543775																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										39.55	0.843231894587517	0.108678775214296	0.455109011286475	-0.165997903989801	0.517811238015827					53407	HGNC:15942						5	2.4881e-07	1.1678e-06			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.3	STX18-IT1				NR_126434	1	4477847	4483427	5580	0	0	NA	4	txStart-txEnd	UTR			4477847	4483427																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																																full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	STX18-AS1				NR_037888	1	4543857	4712665	168808	0	0	NA	6	txStart-txEnd	UTR			4543857	4712665																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				100507266	HGNC:48877											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	SNORD162				NR_145783	1	4666052	4666150	98	0	0	NA	1	txStart-txEnd	UTR			4666052	4666150																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				109623454	HGNC:51876											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	LOC101928279				NR_125892	1	4763486	4789101	25615	0	0	NA	3	txStart-txEnd	UTR			4763486	4789101																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																																full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	LINC01396				NR_125765	1	4846163	4852554	6391	0	0	NA	4	txStart-txEnd	UTR			4846163	4852554																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																																full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	MSX1				NM_002448	3	4861391	4865663	4272	912	100	no	2	txStart-txEnd	5'UTR-3'UTR			4861391	4865663						Ectodermal dysplasia 3, Witkop type, 189500 (3) AD;Orofacial cleft 5, 608874 (3) AD;Tooth agenesis, selective, 1, with or without orofacial cleft, 106600 (3) AD		HI3:MSX1;morbid:MSX1	4:4861392-4865663;4:4861393-4865663															12	Hypoplastic_enamel-onycholysis-hypohidrosis_syndrome;MSX1-related_disorder;Tooth_agenesis,_selective,_1										IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																								3	0	1.21	0.15460042661567	0.172845644735031	0.256065903692486	1.56448356794936	2.50372489686823	tooth agenesis;tooth agenesis, selective, 1;tooth and nail syndrome	AD	Definitive;Limited;Strong;Supportive	1054139;10742093;10815578;11369996;11369996[PMID];12097313;15264286;16498076;26502894;4521949;8466837;8469557;8696335;9742121;NULL	4487	HGNC:7391	142983	Ectodermal dysplasia 3, Witkop type, 189500 (3) AD;Orofacial cleft 5, 608874 (3) AD;Tooth agenesis, selective, 1, with or without orofacial cleft, 106600 (3) AD	AD	yes		5	1.6517e-01	2.7536e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	LOC101928306				NR_125893	1	4922534	4990398	67864	0	0	NA	3	txStart-txEnd	UTR			4922534	4990398																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																																full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	CYTL1				NM_018659	3	5016312	5021185	4873	411	100	no	4	txStart-txEnd	5'UTR-3'UTR			5016312	5021185																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										76.44	-0.6295570831736	0.0670299843738293	-0.200045256499347	0.45277691276168	0.0974901129923348					54360	HGNC:24435						9	1.0733e-05	6.5277e-04			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	STK32B				NM_018401	3	5053206	5502716	449510	1245	100	no	12	txStart-txEnd	5'UTR-3'UTR			5053206	5502716																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										39.31	-0.246593908057665	0.0285262483698947	-0.063872653370671	-2.65953872619111	-2.04902349969142					55351	HGNC:14217						5	4.9116e-08	4.3235e-03			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	LINC01587				NR_126519	1	5526295	5529528	3233	0	0	NA	4	txStart-txEnd	UTR			5526295	5529528																													dbVar	chr4:5334999-5780000	0.01				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										96.4										10141	HGNC:13716											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	EVC2				NM_147127	5	5564165	5710286	146121	3927	100	no	22	txStart-txEnd	5'UTR-3'UTR			5564165	5710286				dbVar:nssv17973849	4:5567009-5587839			dbVar:nssv15770321;dbVar:nssv16213046;dbVar:nssv16213271;dbVar:nssv16297119;dbVar:nssv17172955;dbVar:nssv17971266;dbVar:nssv17971361;dbVar:nssv17972056;dbVar:nssv18790018;dbVar:nssv18790020;dbVar:nssv18790021;dbVar:nssv18790022	4:5564566-5578191;4:5564566-5586587;4:5564576-5567096;4:5570162-5570377;4:5576403-5576509;4:5630277-5633769;4:5630336-5635926;4:5630338-5635927;4:5642222-5642585;4:5690875-5691080;4:5690875-5696238;4:5696053-5696238															199	Curry-Hall_syndrome;EVC2-related_disorder;Ellis-van_Creveld_syndrome;Inborn_genetic_diseases;Jeune_thoracic_dystrophy;Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly;Type_IV_short_rib_polydactyly_syndrome;not_specified				dbVar	chr4:5334999-5780000	0.01				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																								30	0	74.81	-0.675336787286134	-0.144705826949755	-0.333473000003108	-1.44193705805358	-2.99791740003004	Ellis-van Creveld syndrome;acrofacial dysostosis, Weyers type	AD;AR	Definitive;Strong;Supportive	16404586;17024374;17547743;19810119;19876929;225500;22616035;23220543;23220543[PMID]_22791528[PMID]_12571802[PMID]_12468274[PMID];23220543[PMID]_22791528[PMID]_16404586[PMID]	132884	HGNC:19747	607261	Ellis-van Creveld syndrome, 225500 (3) AR;Weyers acrofacial dysostosis, 193530 (3) AD	AD;AR	yes		5	1.0207e-34	1.0533e-21			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	EVC				NM_153717	3	5712927	5816032	103105	2979	100	no	21	txStart-txEnd	5'UTR-3'UTR			5712927	5816032				dbVar:nssv17172169	4:5785270-5803831	?Weyers acrofacial dysostosis, 193530 (3) AD;Ellis-van Creveld syndrome, 225500 (3) AR;Ellis-van_Creveld_syndrome|Curry-Hall_syndrome		CLN:1313135;dbVar:nssv15144315;dbVar:nssv16211870;dbVar:nssv16297131;dbVar:nssv17172168;dbVar:nssv17172572;dbVar:nssv17172573;dbVar:nssv17172574;dbVar:nssv17971734;dbVar:nssv17973718;nssv17974037;dbVar:nssv17975024;dbVar:nssv18786244;dbVar:nssv18790117;dbVar:nssv18790118;dbVar:nssv18790119;dbVar:nssv18790120;morbid:EVC	4:5712928-5816032;4:5713109-5714221;4:5713159-5713318;4:5731025-5759862;4:5733143-5735172;4:5749726-5755670;4:5754554-5755670;4:5754554-5758099;4:5754554-5785501;4:5754599-5758602;4:5785270-5812774;4:5795340-5795484;4:5795341-5795483;4:5798730-5798979;4:5798740-5798969;4:5803668-5806578;4:5809919-5811348															161	Curry-Hall_syndrome;EVC-related_disorder;Ellis-van_Creveld_syndrome;Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly										IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										72.76	-2.57221447207538	-0.38737545040403	-1.26125942639438	-0.471176482163648	-1.41925515956187	Ellis-van Creveld syndrome;acrofacial dysostosis, Weyers type	AD;AR	Definitive;Limited;Strong;Supportive	10700184;10700184[PMID];17024374;23220543;23220543[PMID]_22791528[PMID]_19744229[PMID]_18947413[PMID];26748586;29321360;30076350;7628126	2121	HGNC:3497	604831	?Weyers acrofacial dysostosis, 193530 (3) AD;Ellis-van Creveld syndrome, 225500 (3) AR	AD;AR	yes	yes	5	3.4620e-25	8.0150e-08			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	CRMP1				NM_001014809	3	5822490	5894813	72323	2061	100	no	14	txStart-txEnd	5'UTR-3'UTR			5822490	5894813																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										43.19	-2.45831687825306	-0.486186941840208	-1.27538361497834	0.0326224850029478	2.34696639804313					1400	HGNC:2365						1	9.9173e-01	9.5327e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2	MIR378D1				NR_039608	1	5925001	5925055	54	0	0	NA	1	txStart-txEnd	UTR			5925001	5925055																													dbVar	chr4:5918046-5928942	0.01				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				100616201	HGNC:41550											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.2-p16.1	C4orf50				NM_001364689	3	5961101	6020158	59057	4527	100	no	12	txStart-txEnd	5'UTR-3'UTR			5961101	6020158																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										98.01	0.369490376960693	0.371330581311454	0.517389412359409	-2.62911053265251	-1.8079483903393					389197	HGNC:33766						7	7.7361e-19	6.3423e-10			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	JAKMIP1				NM_001099433	2	6027925	6202276	174351	2496	100	no	21	txStart-txEnd	5'UTR-3'UTR			6027925	6202276																								1	Smith-Magenis_Syndrome-like										IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										52.99	0.975078008148592	0.865866943304307	1.11611247300207	0.172471674763915	3.32151835531883					152789	HGNC:26460						0	9.9986e-01	9.9317e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	LOC128125818				NM_001415001	1	6066703	6071889	5186	138	100	no	2	txStart-txEnd	5'UTR-3'UTR			6066703	6071889																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																																full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	JAKMIP1-DT				NR_037863	1	6202459	6235663	33204	0	0	NA	4	txStart-txEnd	UTR			6202459	6235663																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				285484	HGNC:27728											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	WFS1				NM_001145853	1	6271576	6304992	33416	2673	100	no	8	txStart-txEnd	5'UTR-3'UTR			6271576	6304992						?Cataract 41, 116400 (3) AD;Deafness, AD 6;14;38, 600965 (3) AD;Wolfram syndrome 1, 222300 (3) AR;Wolfram-like syndrome, AD, 614296 (3) AD;Diabetes mellitus, noninsulin-dependent, association with, 125853 (3) AD		dbVar:nssv18790633;morbid:WFS1	4:6271577-6304992;4:6279184-6279434															142	Autosomal_dominant_nonsyndromic_hearing_loss;Autosomal_dominant_nonsyndromic_hearing_loss_6;Cataract_41;Diabetes_mellitus;Inborn_genetic_diseases;Meniere_disease;Nonsyndromic_genetic_hearing_loss;Optic_atrophy;Rare_genetic_deafness;Retinal_dystrophy;See_cases;Type_2_diabetes_mellitus;WFS1-Related_Spectrum_Disorders;WFS1-related_disorder;WFS1-spectrum_disorder;Wolfram-like_syndrome;Wolfram_syndrome;Wolfram_syndrome_1;not_specified										IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																								0	0	33.79	0.279433736423428	0.30418592454869	0.420298457025828			Wolfram syndrome;Wolfram syndrome 1;Wolfram-like syndrome;autosomal dominant nonsyndromic hearing loss;autosomal dominant nonsyndromic hearing loss 6;cataract 41;early-onset nuclear cataract;type 2 diabetes mellitus	AD;AR	Definitive;Limited;Strong;Supportive	11709537;11709538;12073007;12754709;12955714;16151413;16648378;16806192;16806192[PMID]_12913071[PMID];17492394;18544103;20069065;20069065[PMID]_20301750[PMID];20301607[PMID]_24148127[PMID];21446023;21538838;21602428;222300;23531866;23531866[PMID];243330;248846;251462;25250959;27395765;28802351;29529044;31313226;31555371;34014271;35018440;606201	7466	HGNC:12762	606201	?Cataract 41, 116400 (3) AD;Deafness, AD 6/14/38, 600965 (3) AD;Wolfram syndrome 1, 222300 (3) AR;Wolfram-like syndrome, AD, 614296 (3) AD;(Diabetes mellitus, noninsulin-dependent, association with), 125853 (3) AD	AD;AR	yes	yes	9	1.6231e-38				full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	PPP2R2C				NM_020416	4	6322307	6474341	152034	1344	100	no	9	txStart-txEnd	5'UTR-3'UTR			6322307	6474341																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										50.29	0.338434929038259	0.422718688109719	0.476236130280707	-0.54023780146542	4.10111380803453					5522	HGNC:9306						1	8.9954e-01	5.6445e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	MAN2B2				NM_015274	3	6576915	6625089	48174	3030	100	no	19	txStart-txEnd	5'UTR-3'UTR			6576915	6625089						Congenital disorder of glycosylation type 1EE with or without immunodeficiency, 621140 (3) AR		morbid:MAN2B2	4:6576916-6625089																										IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										83.66	-1.20308868163847	-0.039423685654856	-0.514512683951566	0.311204487601666	-0.733522379663636	MAN2B2 deficiency	AR	Limited		23324	HGNC:29623	618899	Congenital disorder of glycosylation type 1EE with or without immunodeficiency, 621140 (3) AR	AR	yes		5	6.5570e-23	4.3573e-18			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	MRFAP1				NM_001272053	2	6642411	6644456	2045	384	96	no	3	txStart-txEnd	5'UTR-3'UTR			6642411	6644456																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										78.84	0.686792213866423	0.236901723651345	0.49521306481059	0.837271434822507	2.12628699887071					93621	HGNC:24549						6	3.1404e-01	1.7706e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	LINC02482				NR_134664	1	6672454	6675608	3154	0	0	NA	2	txStart-txEnd	UTR			6672454	6675608																													dbVar	chr4:6666000-6686000	0.01				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				105374366	HGNC:53458											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	MRFAP1L2				NM_138699	3	6675801	6677774	1973	360	19	no	1	txStart-txEnd	5'UTR-3'UTR			6675801	6677774																													dbVar	chr4:6666000-6686000	0.01				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				93622	HGNC:25109											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	LINC02481				NR_147207	1	6689174	6692246	3072	0	0	NA	3	txStart-txEnd	UTR			6689174	6692246																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				339988	HGNC:27958											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	S100P				NM_005980	3	6695604	6698897	3293	288	100	no	2	txStart-txEnd	5'UTR-3'UTR			6695604	6698897																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										89.8	-0.0213485169134644	-0.684657921159283	-0.478383965590741	0.251281715605183	-0.615839346409602					6286	HGNC:10504						9	3.3257e-02	4.8649e-02			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	MRFAP1L1				NM_203462	3	6709427	6711592	2165	384	61	no	2	txStart-txEnd	5'UTR-3'UTR			6709427	6711592																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										84.97	0.629248196007981	0.195831367621135	0.447874019110796	1.72296511806951	0.620681882628763					114932	HGNC:28796						8	2.5481e-03	8.9080e-03			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	BLOC1S4				NM_018366	3	6717900	6719391	1491	654	44	no	1	txStart-txEnd	5'UTR-3'UTR			6717900	6719391																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										72.47				2.75338717063303	1.98938453238048					55330	HGNC:24206						9	1.0151e-01	1.5897e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	KIAA0232				NM_001100590	2	6784453	6885891	101438	4188	100	no	9	txStart-txEnd	5'UTR-3'UTR			6784453	6885891																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										62.19	0.495223937339359	-0.201270287076057	0.0915777485634488	-1.04317795810088	0.185259378880778					9778	HGNC:28992						0	9.9999e-01	9.9472e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	TBC1D14				NM_001113361	2	6911192	7034841	123649	2082	100	no	14	txStart-txEnd	5'UTR-3'UTR			6911192	7034841																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										58.66	0.38643088540431	0.788716334548764	0.774883176364413	-0.521938260031064	1.10884704568458					57533	HGNC:29246						2	3.9267e-02	9.0900e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	LOC100129931				NR_033828	1	7032280	7047958	15678	0	0	NA	4	txStart-txEnd	UTR			7032280	7047958																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																																full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	CFAP184				NM_153376	3	7042575	7044728	2153	1668	96	no	1	txStart-txEnd	5'UTR-3'UTR			7042575	7044728																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				257236	HGNC:26900											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	TADA2B				NM_152293	3	7045098	7059679	14581	1263	100	no	2	txStart-txEnd	5'UTR-3'UTR			7045098	7059679																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										53.19	0.052084742182682	-0.284361515719772	-0.145832700564166	0.664832774210228	4.02698047878354					93624	HGNC:30781						2	7.2366e-01	3.4506e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	GRPEL1				NM_025196	4	7060621	7069791	9170	654	100	no	4	txStart-txEnd	5'UTR-3'UTR			7060621	7069791																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										50.3	0.649976625334672	-1.27240513662323	-0.777477966060391	0.934834224809331	0.303907421223287					80273	HGNC:19696						4	1.3916e-01	8.9627e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	LINC02447				NR_027441	1	7099150	7105103	5953	0	0	NA	2	txStart-txEnd	UTR			7099150	7105103																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				730971	HGNC:53379											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	SORCS2				NM_020777	3	7194264	7744554	550290	3480	100	no	27	txStart-txEnd	5'UTR-3'UTR			7194264	7744554																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										69.5	1.29231994213647	0.27620541213653	0.660060919341019	-1.05139548669208	0.853955018782722					57537	HGNC:16698						2	3.1696e-03	2.6463e-03			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	MIR4798				NR_039961	1	7312176	7312251	75	0	0	NA	1	txStart-txEnd	UTR			7312176	7312251																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				100616471	HGNC:41616											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	PSAPL1				NM_001085382	2	7432011	7436657	4646	1566	96	no	1	txStart-txEnd	5'UTR-3'UTR			7432011	7436657																													dbVar	chr4:7313592-7549020	0.01				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										96.06	-0.246463271906552	-0.572766431683099	-0.498050358907741	-1.4518704411588	-1.9222533414192					768239	HGNC:33131								3.3350e-11			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	MIR4274				NR_036238	1	7461754	7461845	91	0	0	NA	1	txStart-txEnd	UTR			7461754	7461845																													dbVar	chr4:7313592-7549020	0.01				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				100422826	HGNC:38194											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	AFAP1-AS1				NR_026892	1	7755816	7780655	24839	0	0	NA	2	txStart-txEnd	UTR			7755816	7780655																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				84740	HGNC:28141											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	AFAP1				NM_001134647	2	7760440	7941588	181148	2445	100	no	18	txStart-txEnd	5'UTR-3'UTR			7760440	7941588																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										70.06	-2.62354415217069	-0.232673834093773	-1.98456571684452	-1.13990389227529	-0.987321027475765					60312	HGNC:24017						3	2.3828e-07	3.7607e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	LOC389199				NR_172651	1	7940727	7942023	1296	0	0	NA	1	txStart-txEnd	UTR			7940727	7942023																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																																full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	ABLIM2				NM_001130083	2	7967053	8160540	193487	1938	100	no	21	txStart-txEnd	5'UTR-3'UTR			7967053	8160540																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										63.64	0.337838438332487	-0.499016330621921	-0.246989921895573	-1.59029981969928	-1.42113131036961					84448	HGNC:19195						2	4.5858e-03	7.6242e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	MIR95				NR_029511	1	8007027	8007108	81	0	0	NA	1	txStart-txEnd	UTR			8007027	8007108																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				407052	HGNC:31647											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	SH3TC1				NM_018986	5	8201016	8242830	41814	4011	100	no	18	txStart-txEnd	5'UTR-3'UTR			8201016	8242830																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										89.77	-0.370323251116391	-0.462112374732113	-0.471672769326771	-2.08522134689875	-3.42040819381878					54436	HGNC:26009						7	6.0939e-35	1.0820e-27			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	HTRA3				NM_053044	5	8271480	8308825	37345	1362	100	no	9	txStart-txEnd	5'UTR-3'UTR			8271480	8308825								morbid:HTRA3	4:8271481-8308825																										IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										70.02	-0.536935947037787	-0.623131034083341	-0.644700690991608	0.667359866413857	1.21754776737995					94031	HGNC:30406				yes		6	6.5843e-08	1.7199e-05			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	LINC02517				NR_149125	1	8321902	8325692	3790	0	0	NA	4	txStart-txEnd	UTR			8321902	8325692																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																				105374374	HGNC:53506											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	ACOX3				NM_003501	3	8368008	8442450	74442	2103	100	no	18	txStart-txEnd	5'UTR-3'UTR			8368008	8442450																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										82.99	-2.37227679543374	-0.95101441383295	-1.44715983267575	-0.00424238497735845	-0.527819209746206					8310	HGNC:121						5	7.6016e-16	3.0316e-12			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	TRMT44				NM_152544	3	8442503	8478282	35779	2274	100	no	11	txStart-txEnd	5'UTR-3'UTR			8442503	8478282																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										87.71	-2.36525961978995	-1.15479952515637	-1.59282400997772	-0.488109075837714	-1.79889045378054					152992	HGNC:26653						7	2.0315e-22	1.4776e-13			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	GPR78				NM_080819	5	8582118	8591750	9632	1092	100	no	3	txStart-txEnd	5'UTR-3'UTR			8582118	8591750																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										91.64	-2.62354415217069	-1.33186842996177	-1.94147419136763	-0.663631774481401	-1.44235869751468					27201	HGNC:4528						9	2.6834e-06	1.2826e-05			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	CPZ				NM_001014447	3	8594491	8621479	26988	1959	100	no	11	txStart-txEnd	5'UTR-3'UTR			8594491	8621479																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										75.68	-2.62354415217069	-1.41032367542656	-1.95519140378666	-2.6391793475309	-5.33339017829433					8532	HGNC:2333						9	8.8063e-36	4.5080e-21			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	LOC101928532				NR_187901	1	8747121	8749448	2327	0	0	NA	3	txStart-txEnd	UTR			8747121	8749448																																			IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																																																full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	HMX1				NM_018942	3	8868773	8873565	4792	1047	100	no	2	txStart-txEnd	5'UTR-3'UTR			8868773	8873565						Oculoauricular syndrome, 612109 (3) AR		morbid:HMX1	4:8868774-8873565															1	Isolated_microphthalmia_6										IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950	0.1474																										66.38				1.46868520416757	1.8176765127262	oculoauricular syndrome	AR	Definitive;Strong;Supportive	18423520;18423520[PMID]_25574057[PMID];19379485;25574057;29140751	3166	HGNC:5017	142992	Oculoauricular syndrome, 612109 (3) AR	AR	yes		3	7.2623e-01	1.2528e-01			full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	FAM90A26				NM_001358418	3	9172134	9178456	6322	1395	100	no	7	txStart-txEnd	5'UTR-3'UTR			9172134	9178456																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	1000g;DDD:12912;DDD:12915;dbVar;dgv923e199;esv3599566	4:9043826-9467101;chr4:9157568-9214307;4:9157569-9214307;4:9157569-9214307;4:9158155-9232046;4:9160215-9232041	1.0000				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										98.14										100287045	HGNC:43746						9	2.8656e-01				full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L10				NM_001256852	1	9212382	9213975	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9212382	9213975																										DDD:12912;DDD:12919;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101;4:9176165-9236152	0.1145	1000g;DDD:12912;DDD:12915;DDD:12919;dbVar;dgv923e199;esv3599566	4:9043826-9467101;chr4:9157568-9214307;4:9157569-9214307;4:9157569-9214307;4:9158155-9232046;4:9160215-9232041;4:9176165-9236152	1.0000				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										88.87										100287144	HGNC:44438											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L11				NM_001256854	1	9217130	9218723	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9217130	9218723																										DDD:12912;DDD:12919;DDD:12922;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101;4:9176165-9236152;4:9212771-9237062	0.1145	DDD:12912;DDD:12915;DDD:12919;DDD:12922;dgv923e199	4:9043826-9467101;4:9158155-9232046;4:9160215-9232041;4:9176165-9236152;4:9212771-9237062	1.0000				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										92.38										100287178	HGNC:44439											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L12				NM_001256853	1	9221877	9223470	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9221877	9223470																										DDD:12912;DDD:12919;DDD:12922;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101;4:9176165-9236152;4:9212771-9237062	0.1145	DDD:12912;DDD:12915;DDD:12919;DDD:12922;dgv923e199	4:9043826-9467101;4:9158155-9232046;4:9160215-9232041;4:9176165-9236152;4:9212771-9237062	1.0000				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										91.28										100287205	HGNC:44440											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L13				NM_001256855	1	9226621	9228214	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9226621	9228214																										DDD:12912;DDD:12919;DDD:12922;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101;4:9176165-9236152;4:9212771-9237062	0.1145	DDD:12912;DDD:12915;DDD:12919;DDD:12922;dgv923e199	4:9043826-9467101;4:9158155-9232046;4:9160215-9232041;4:9176165-9236152;4:9212771-9237062	1.0000				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										93.57										100287238	HGNC:44441											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L15				NM_001256894	2	9236110	9237772	1662	1662	100	no	1	txStart-txEnd	5'UTR-3'UTR			9236110	9237772																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										88.6										100288520	HGNC:44443											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L17				NM_001256857	1	9245604	9247197	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9245604	9247197																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										91.84										100287327	HGNC:44445											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L18				NM_001256859	1	9250355	9251948	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9250355	9251948																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										91.4										100287364	HGNC:44446											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L19				NM_001256860	1	9255103	9256696	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9255103	9256696																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										89.82										100287404	HGNC:44447											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L20				NM_001256861	1	9259849	9261442	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9259849	9261442																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										92.3										100287441	HGNC:44448											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L21				NM_001256862	1	9264597	9266190	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9264597	9266190																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										93.14										100287478	HGNC:44449											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L22				NM_001256863	1	9269344	9270937	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9269344	9270937																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										90.3										100287513	HGNC:44450											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L24				NM_001242327	1	9326890	9328483	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9326890	9328483																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										94.26										728369	HGNC:44453											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L25				NM_001242326	1	9331636	9333229	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9331636	9333229																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										92.83										728373	HGNC:44452											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L26				NM_001242328	1	9336383	9337976	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9336383	9337976																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										92.3										728379	HGNC:44454											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L5				NM_001242329	1	9341128	9342721	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9341128	9342721																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										93.97										728386	HGNC:37177											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L27				NM_001242330	1	9345873	9347466	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9345873	9347466																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										94.31										728393	HGNC:44455											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L28				NM_001242331	1	9350618	9352211	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9350618	9352211																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										95.78										728400	HGNC:44456											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L29				NM_001242332	1	9355363	9356956	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9355363	9356956																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										94.78										728405	HGNC:44457											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L9P				NR_046416	1	9360107	9361700	1593	0	0	NA	1	txStart-txEnd	UTR			9360107	9361700																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																																				391627	HGNC:12615											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L30				NM_001256867	1	9364854	9366447	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			9364854	9366447																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																										94.83										728419	HGNC:44458											full=5
4_71553_9371067_DEL_1	4	71553	9371067	-9299515	DEL	4p- syndrom	Pathogenic	NA	split	p16.1	USP17L6P				NR_027279	1	9369599	9370796	1197	0	0	NA	1	txStart-txEnd	UTR			9369599	9370796																										DDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174	4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101	0.1145	DDD:12912	4:9043826-9467101	0.0130				IMH	4:2823210-17706072;4:4005753-9642302;4:4006353-9641444	0.1474																																				391622	HGNC:37179											full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	full	q11.23	TRIM50;FKBP6;FZD9;BAZ1B;BCL7B;TBL2;MLXIPL;VPS37D;DNAJC30;BUD23;STX1A;MIR4284;BICDL3P;ABHD11;CLDN3;CLDN4;METTL27;TMEM270;ELN;ELN-AS1;LIMK1;EIF4H;MIR590;LAT2;RFC2;CLIP2;GTF2IRD1;MIR10525;GTF2I;GTF2I-AS1	NSUN5	NCF1	30																ACOX1 (morbid/RE=mTL_miRNA);AGO2 (morbid/RE=mTL_miRNA);AGTPBP1 (morbid/RE=mTL_miRNA);AHR (morbid/RE=mTL_miRNA);AKR1D1 (morbid/RE=mTL_miRNA);ALDH6A1 (morbid/RE=mTL_miRNA);ALDOA (morbid/RE=mTL_miRNA);APC (HI=3/morbid/RE=mTL_miRNA);APTX (morbid/RE=mTL_miRNA);ARSK (morbid/RE=mTL_miRNA);ATL3 (morbid/RE=mTL_miRNA);ATP13A3 (morbid/RE=mTL_miRNA);ATP6V0A2 (morbid/RE=mTL_miRNA);ATP6V1A (morbid/RE=mTL_miRNA);ATXN1 (morbid/RE=mTL_miRNA);BACH1 (morbid/RE=mTL_miRNA);BVES (morbid/RE=mTL_miRNA);C3 (morbid/RE=mTL_miRNA);CAPN15 (morbid/RE=mTL_miRNA);CASP10 (morbid/RE=mTL_miRNA);CD3D (morbid/RE=mTL_miRNA);CDC73 (HI=3/morbid/RE=mTL_miRNA);CDKN1B (HI=3/morbid/RE=mTL_miRNA);CHRNB1 (morbid/RE=mTL_miRNA);CIAO1 (morbid/RE=mTL_miRNA);CISD2 (morbid/RE=mTL_miRNA);CITED2 (morbid/RE=mTL_miRNA);CLEC7A (morbid/RE=mTL_miRNA);CLN8 (morbid/RE=mTL_miRNA);COL18A1 (morbid/RE=mTL_miRNA);COX20 (morbid/RE=mTL_miRNA);COX6B1 (morbid/RE=mTL_miRNA);CPE (morbid/RE=mTL_miRNA);CPT1A (morbid/RE=mTL_miRNA);CRIPT (morbid/RE=mTL_miRNA);CRTAP (morbid/RE=mTL_miRNA);CSNK1D (morbid/RE=mTL_miRNA);CTSB (morbid/RE=mTL_miRNA);CYCS (morbid/RE=mTL_miRNA);DARS2 (morbid/RE=mTL_miRNA);DBR1 (morbid/RE=mTL_miRNA);DNA2 (morbid/RE=mTL_miRNA);DNAAF3 (morbid/RE=mTL_miRNA);DNAJB13 (morbid/RE=mTL_miRNA);DNAJC3 (morbid/RE=mTL_miRNA);DSG3 (morbid/RE=mTL_miRNA);EDARADD (morbid/RE=mTL_miRNA);EIF2S3 (morbid/RE=mTL_miRNA);EIF4A2 (morbid/RE=mTL_miRNA);ELP2 (morbid/RE=mTL_miRNA)...			dbVar:nssv15146175;nssv15148276;dbVar:nssv15146450;dbVar:nssv15147327;dbVar:nssv17955524;dbVar:nssv17976654	7:72766114-74133473;7:72766313-74133327;7:72766314-74042787;7:72766314-74133332;7:73944169-74138459	Cutis laxa, AD, 123700 (3) AD;Supravalvar aortic stenosis, 185500 (3) AD;Leber-like hereditary optic neuropathy, AR 1, 619382 (3) AR;Spermatogenic failure 77, 620103 (3) AR		HI3:ELN;dbVar:nssv15128343;dbVar:nssv15128578;dbVar:nssv15130113;dbVar:nssv15130169;dbVar:nssv15140244;dbVar:nssv15141480;dbVar:nssv15145649;nssv15146804;nssv15153080;dbVar:nssv15146451;dbVar:nssv15146687;dbVar:nssv15146708;dbVar:nssv15151951;nssv15605841;dbVar:nssv15167740;dbVar:nssv15770120;dbVar:nssv16208140;dbVar:nssv16213814;dbVar:nssv16214480;dbVar:nssv16214500;dbVar:nssv17172745;dbVar:nssv17172746;dbVar:nssv17955650;dbVar:nssv17971140;dbVar:nssv18786274;dbVar:nssv18791884;dbVar:nssv18791887;morbid:DNAJC30;morbid:ELN;morbid:FKBP6	7:72726579-74139390;7:72742164-72772634;7:72766114-74133473;7:72766313-74133327;7:72766314-74133332;7:72772523-74133319;7:72996565-73597315;7:73023063-73524207;7:73095248-73097783;7:73150890-73604636;7:73187644-73501025;7:73442120-73484237;7:73442459-73483087;7:73442499-73442619;7:73442499-73483050;7:73442503-73484237;7:73442504-73484237;7:73442509-73483040;7:73442519-73449764;7:73442519-73483030;7:73444331-73476493;7:73449675-73483050;7:73461986-73483030;7:73470471-73498327;7:73471703-73483040;7:73482968-73483050;7:73482988-73484237;7:73791726-74133273					7q11.23 recurrent (Williams-Beuren syndrome) region (includes ELN)		dbVar:nssv15777247;dbVar:nssv15168013;dbVar:nssv15161666;nssv15161679;dbVar:nssv15168014;dbVar:nssv15146013;dbVar:nssv15146778;dbVar:nssv15147714;dbVar:nssv15147012;dbVar:nssv15147013;dbVar:nssv15755212;dbVar:nssv15147334;dbVar:nssv15151509;dbVar:nssv15154519;dbVar:nssv15152109;dbVar:nssv15153678;dbVar:nssv15148173;dbVar:nssv15149887;dbVar:nssv15147399;dbVar:nssv15148904;dbVar:nssv15174166;dbVar:nssv15128409;dbVar:nssv15150793;dbVar:nssv16254014;dbVar:nssv15148877;dbVar:nssv18830985;dbVar:nssv15147014;dbVar:nssv15149513;dbVar:nssv15146773;dbVar:nssv15151227;dbVar:nssv15147017;dbVar:nssv15146395;dbVar:nssv15147458;dbVar:nssv15126184;dbVar:nssv17976854;dbVar:nssv15150228;dbVar:nssv15147556;dbVar:nssv15146449;dbVar:nssv15151508;dbVar:nssv15150733;dbVar:nssv15154518;dbVar:nssv17955880;dbVar:nssv18830970;dbVar:nssv15146933;dbVar:nssv16215249;dbVar:nssv15167739;TS3:ISCA-37392;dbVar:nssv15148970	7:10366-159119707;7:10705-159122532;7:43362-159119707;7:44936-159126310;7:62437464-75044630;7:71644078-78793387;7:71968213-74133332;7:72196406-74991125;7:72233836-74285345;7:72364527-73780265;7:72408603-74193374;7:72576873-74175429;7:72577022-74147166;7:72577022-74197846;7:72577022-74859638;7:72589516-74154603;7:72589516-74165401;7:72606410-74193403;7:72606410-74300084;7:72606451-74153206;7:72650008-74188572;7:72659675-74143240;7:72659675-74164894;7:72663963-74193403;7:72664462-74162586;7:72665463-74139573;7:72677174-74143140;7:72677302-74143060;7:72677302-74143240;7:72679398-74139573;7:72683245-74267189;7:72685735-74142327;7:72685764-74189674;7:72686959-74155067;7:72692113-74154497;7:72700128-74146858;7:72700415-74139573;7:72700525-74069858;7:72700525-74142256;7:72701019-74143240;7:72717346-74133310;7:72718278-74142256;7:72718279-74140708;7:72722982-74141840;7:72743984-74145064;7:72744456-74142510;7:72766314-74481540	0.89;0.89;0.89;0.89;11.21;19.76;64.97;50.55;68.87;74.43;79.16;88.38;89.98;87.17;61.89;90.27;89.65;89.02;83.42;91.34;91.83;95.23;93.86;92.37;94.31;95.84;96.37;96.39;96.38;96.76;89.20;96.99;93.94;96.23;96.61;97.66;98.17;98.10;97.99;97.96;99.35;99.22;99.32;99.57;99.60;99.78;80.05	7q11.23 recurrent (Williams-Beuren syndrome) region (includes ELN)		dbVar:nssv15161318;dbVar:nssv15148211;dbVar:nssv15147057;dbVar:nssv15147200;dbVar:nssv16255682;dbVar:nssv15146320;dbVar:nssv15146676;dbVar:nssv16867365;dbVar:nssv15167734;dbVar:nssv15146211;dbVar:nssv16254015;dbVar:nssv15151112;dbVar:nssv15145801;dbVar:nssv15152099;dbVar:nssv17977008;dbVar:nssv15151511;dbVar:nssv17977009;dbVar:nssv15145887;dbVar:nssv15147427;dbVar:nssv15153677;dbVar:nssv15154521;dbVar:nssv16208139;dbVar:nssv15145827;dbVar:nssv15148206;dbVar:nssv15151289;dbVar:nssv18330757;dbVar:nssv15125131;dbVar:nssv17977011;dbVar:nssv15167735;dbVar:nssv15148192;dbVar:nssv15167736;dbVar:nssv15168977;dbVar:nssv18330770;dbVar:nssv16215159;dbVar:nssv15129678;dbVar:nssv15147158;dbVar:nssv15606134;dbVar:nssv15145898;dbVar:nssv15151092;dbVar:nssv15755220;dbVar:nssv17977017;dbVar:nssv15147160;dbVar:nssv15147159;dbVar:nssv15145802;dbVar:nssv15147457;dbVar:nssv15148226;dbVar:nssv15147515;dbVar:nssv15147502;dbVar:nssv15148195;dbVar:nssv15147550;dbVar:nssv17977015;dbVar:nssv15605840;dbVar:nssv17977014;dbVar:nssv15149859;dbVar:nssv17977016;dbVar:nssv15150016;dbVar:nssv15146951;dbVar:nssv16297072;dbVar:nssv18830737;dbVar:nssv15154517;nssv17977012;dbVar:nssv17977007;dbVar:nssv15146637;dbVar:nssv15149107;dbVar:nssv15150231;dbVar:nssv15150699;dbVar:nssv15150637;dbVar:nssv15151346;dbVar:nssv15148257;nssv17977121;dbVar:nssv15150643;dbVar:nssv15149860;dbVar:nssv15151090;dbVar:nssv18329614;dbVar:nssv18330419;dbVar:nssv18330223;dbVar:nssv15167737;dbVar:nssv15605774;dbVar:nssv8640006;dbVar:nssv15167738;dbVar:nssv15147726;dbVar:nssv15755221;HI3:ISCA-37392;dbVar:nssv15605838;dbVar:nssv15605839;dbVar:nssv15147324;dbVar:nssv15147329;dbVar:nssv15145670;dbVar:nssv15145679;nssv15146800;dbVar:nssv15146612;dbVar:nssv17977013;dbVar:nssv15124428;dbVar:nssv15776001;dbVar:nssv15120782;dbVar:nssv15148954;dbVar:nssv15147202	7:54186-159075079;7:62196743-75061986;7:68133295-72806397;7:68847340-77453149;7:68977231-73939510;7:70690331-81364973;7:70926113-72806397;7:71847969-73391310;7:72305672-74196360;7:72401087-74285345;7:72403118-76709600;7:72456605-76007380;7:72507130-74142327;7:72536981-74629034;7:72589196-74225562;7:72589516-74386749;7:72589516-74629034;7:72606410-74193403;7:72606410-74285345;7:72608515-74386749;7:72612043-74574641;7:72621723-76007380;7:72636007-74339014;7:72637825-74203685;7:72643632-74142190;7:72643633-74143060;7:72644632-74144422;7:72645014-74142190;7:72650107-74138603;7:72650121-74142256;7:72650266-74138603;7:72653307-74134911;7:72654783-74142190;7:72657229-74160300;7:72677238-74144422;7:72681398-74137354;7:72682339-74141250;7:72685735-74142327;7:72691243-74142190;7:72699383-74142329;7:72700128-74142190;7:72700415-74122179;7:72700415-74137354;7:72700415-74139573;7:72700415-74142327;7:72700415-74172913;7:72700415-74193403;7:72700415-74285345;7:72700511-74142190;7:72700525-74141494;7:72700943-74142190;7:72700997-74142190;7:72700997-74142256;7:72701019-74141493;7:72701085-74142190;7:72708238-74133273;7:72708238-74339044;7:72717370-74142224;7:72717396-74173168;7:72718124-74141784;7:72718124-74142190;7:72718253-74133273;7:72718253-74133332;7:72718278-73898515;7:72718278-74141494;7:72718278-74141603;7:72718278-74141746;7:72718278-74142190;7:72718278-74146858;7:72718278-74259899;7:72718278-74287433;7:72718279-74142256;7:72718279-74143060;7:72718279-74143240;7:72719387-74218536;7:72721450-73959106;7:72722982-74141840;7:72722982-74200092;7:72722982-74217390;7:72726591-74142329;7:72744456-74142510;7:72744495-74339044;7:72744495-76038818;7:72766313-74193397;7:72766313-74339030;7:72766314-74285345;7:72766314-74339044;7:72766314-76351578;7:72921551-74145628;7:73591994-75914797;7:73799887-75388031;7:73992745-74991125;7:73992745-81661058;7:73992745-83618176	0.89;10.98;1.71;16.42;24.44;13.24;4.25;43.07;74.72;74.98;32.81;39.79;86.40;67.53;86.34;78.61;69.27;89.02;84.15;79.45;71.99;41.73;82.96;90.23;94.28;94.22;94.20;94.37;94.86;94.68;94.87;95.05;94.98;93.99;96.29;96.90;96.84;96.99;97.37;97.91;97.97;98.16;98.18;98.17;97.98;95.95;94.63;89.14;98.00;98.05;98.03;98.03;98.03;98.08;98.04;98.71;86.63;99.15;97.05;99.24;99.21;99.41;99.41;99.30;99.27;99.26;99.25;99.22;98.90;91.64;90.04;99.22;99.16;99.15;94.24;99.59;99.57;95.65;94.54;99.79;99.78;87.48;42.34;96.22;87.31;90.39;87.31;38.30;99.49;23.57;21.38;14.69;1.91;1.52	127	Autism;Cutis_laxa,_autosomal_dominant_1;DNAJC30-associated_disorder;ELN-related_disorder;Inborn_genetic_diseases;Intellectual_disability;Leber-like_hereditary_optic_neuropathy,_autosomal_recessive_1;Leber_hereditary_optic_neuropathy,_autosomal_recessive;Leber_optic_atrophy,_susceptibility_to;Male_infertility;Optic_atrophy;Retinal_dystrophy;Spermatogenic_failure_77;Supravalvar_aortic_stenosis;Williams_syndrome										IMH	7:66631329-143298938;7:67635774-98083201	0.5000			7:74110032-74113459 DDD:24519;	7:74103674-74113108 DDD:24517;7:74111368-74111473 DDD:24520			chr7:72788610-72788928 dbVar;chr7:72792927-72794734 dbVar;chr7:72807457-72811747 dbVar;chr7:72809374-72811765 dbVar;chr7:72831507-72833102 dbVar;chr7:72831655-72833172 dbVar;7:72859067-72859930 DDD:24502;chr7:72859126-72859948 dbVar;chr7:72958486-72958582 dbVar;chr7:72976072-72983729 dbVar;chr7:73003322-73003446 dbVar;chr7:73047101-73047474 dbVar;chr7:73062999-73081000 dbVar;chr7:73072977-73073093 dbVar;chr7:73106347-73106427 dbVar;chr7:73157999-73206000 dbVar;chr7:73190196-73190548 dbVar;chr7:73196830-73198271 dbVar;chr7:73211482-73211654 dbVar;chr7:73223050-73223264 dbVar...	chr7:72783921-72784587 dbVar;chr7:72790491-72790586 dbVar;chr7:72806431-72813279 dbVar;chr7:72809373-72811754 dbVar;7:72809386-72811787 DDD:24500;7:72831554-72833141 DDD:24501;chr7:72850871-72854146 dbVar;chr7:72859093-72859952 dbVar;chr7:72955017-72955274 dbVar;chr7:72962422-72963182 dbVar;chr7:73002815-73002896 dbVar;chr7:73023279-73023954 dbVar;chr7:73054513-73055107 dbVar;chr7:73065479-73067124 dbVar;chr7:73090809-73093167 dbVar;chr7:73146454-73146754 dbVar;chr7:73173329-73173399 dbVar;chr7:73196779-73198220 dbVar;chr7:73211482-73211632 dbVar;chr7:73222000-73236000 dbVar...	0.370	0.355	7:72726181-72726486	AluSz					7:72700438-72744454;7:72700443-72744454							3		88.46	1.77201404347458	0.0159631069818757	0.491444562429841	2.70903614483931	4.23220859072885							604839;618202;130160			yes		0	1.0000e+00	1.0000e+00	1.45	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3B (30 genes, +0.45);5F (+0.00)	5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	TRIM50				NM_178125	3	72726531	72742085	15507	1464	100	no	7	txStart-exon7	5'UTR-3'UTR	928	3'	72726578	72742085																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										55.55				0.317380023327075	0.681275321847818					135892	HGNC:19017						7	1.5479e-10	2.7256e-06			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	FKBP6				NM_003602	5	72742163	72772634	30471	984	100	no	9	txStart-txEnd	5'UTR-3'UTR			72742163	72772634						Spermatogenic failure 77, 620103 (3) AR		morbid:FKBP6	7:72742164-72772634															1	Male_infertility;Spermatogenic_failure_77										IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										65.69				1.49986407027643	1.4396607305099	spermatogenic failure 77	AR	Moderate		8468	HGNC:3722	604839	Spermatogenic failure 77, 620103 (3) AR	AR	yes		5	1.3955e-06	1.3060e-01			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	FZD9				NM_003508	3	72848107	72850450	2343	1776	84	no	1	txStart-txEnd	5'UTR-3'UTR			72848107	72850450																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										46.95	0.247827425263201	-1.18776035129969	-0.895389454591556							8326	HGNC:4047						4	1.9309e-03				full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	BAZ1B				NM_001370402	1	72854735	72936623	81888	4452	100	no	19	txStart-txEnd	5'UTR-3'UTR			72854735	72936623																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										23.74	1.02239565516008	0.0159631069818757	0.395552906953086	-0.902054979760057	4.05717005254254	autism spectrum disorder	AD	Limited		9031	HGNC:961						0	1.0000e+00	1.0000e+00			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	BCL7B				NM_001301061	2	72950685	72972020	21335	642	100	no	7	txStart-txEnd	5'UTR-3'UTR			72950685	72972020																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										28.63	1.05583278690403	-0.553040364632404	-0.0819162539430506	-0.44503506022657	1.74981493260157					9275	HGNC:1005						3	1.8519e-01	7.0664e-01			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	TBL2				NM_012453	4	72981866	72992909	11043	1344	100	no	7	txStart-txEnd	5'UTR-3'UTR			72981866	72992909																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										30.81	-0.199291215312469	-0.922199212243606	-0.751016280020485	0.200201742907301	0.554223709974506					26608	HGNC:11586						4	1.8452e-04	4.3765e-03			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	MLXIPL				NM_032951	3	73007531	73038852	31321	2559	100	no	17	txStart-txEnd	5'UTR-3'UTR			73007531	73038852																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										36.45	0.942636989769333	-0.774220086661663	-0.327638361779731	0.58127606528246	1.2288879277127					51085	HGNC:12744						2	4.7771e-02	6.7682e-01			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	VPS37D				NM_001077621	2	73082160	73086440	4280	756	100	no	4	txStart-txEnd	5'UTR-3'UTR			73082160	73086440																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										64.11				-0.0288746954043306	0.953055172354045					155382	HGNC:18287						1	9.1622e-01	6.5635e-01			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	DNAJC30				NM_032317	3	73095247	73097783	2536	681	95	no	1	txStart-txEnd	5'UTR-3'UTR			73095247	73097783						Leber-like hereditary optic neuropathy, AR 1, 619382 (3) AR		morbid:DNAJC30	7:73095248-73097783															1	DNAJC30-associated_disorder;Leber-like_hereditary_optic_neuropathy,_autosomal_recessive_1;Leber_hereditary_optic_neuropathy,_autosomal_recessive;Leber_optic_atrophy,_susceptibility_to;Optic_atrophy;Retinal_dystrophy										IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										80.16	0.717396479665947	-0.500797326082256	-0.15204008716984	1.08623431117684	1.71697083676563	Leber hereditary optic neuropathy;Leber hereditary optic neuropathy, autosomal recessive	AR;MT	Limited;Strong;Supportive	33465056;33465056[PMID]	84277	HGNC:16410	618202	Leber-like hereditary optic neuropathy, AR 1, 619382 (3) AR	AR	yes		7	2.3092e-02	4.7983e-03			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	BUD23				NM_001202560	3	73097926	73112542	14616	897	100	no	13	txStart-txEnd	5'UTR-3'UTR			73097926	73112542																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																																				114049	HGNC:16405											full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	STX1A				NM_004603	4	73113539	73133999	20460	867	100	no	10	txStart-txEnd	5'UTR-3'UTR			73113539	73133999																								1	Autism;Intellectual_disability										IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										22.82	0.950800964625408	-0.794674734358171	-0.324619004824717	1.10438995088098	3.33806479625907	cystic fibrosis	AR	Supportive	23572023	6804	HGNC:11433						1	9.7850e-01	9.1048e-01			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	MIR4284				NR_036247	1	73125646	73125727	81	0	0	NA	1	txStart-txEnd	UTR			73125646	73125727																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																																				100422948	HGNC:38322											full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	BICDL3P				NR_026690	1	73149398	73150330	932	0	0	NA	4	txStart-txEnd	UTR			73149398	73150330																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																																				171022	HGNC:18289											full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	ABHD11				NM_148912	4	73150423	73153132	2709	921	100	no	6	txStart-txEnd	5'UTR-3'UTR			73150423	73153132																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										76.55	0.643446275430498	-0.675433866559718	-0.327510119466819	1.09331776236833	0.473373375061211					83451	HGNC:16407						5	2.9581e-03	9.0329e-06			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	CLDN3				NM_001306	4	73183326	73184600	1274	663	75	no	1	txStart-txEnd	5'UTR-3'UTR			73183326	73184600																													dbVar	chr7:73157999-73206000	0.01				IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										33.46	0.332553044404404	-0.966715148489597	-0.688425296234703	2.70903614483931	1.92914089110849					1365	HGNC:2045						4	5.2233e-01	6.7854e-01			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	CLDN4				NM_001305	5	73245325	73247020	1695	630	42	no	1	txStart-txEnd	5'UTR-3'UTR			73245325	73247020																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										23.72	0.563064431580096	-0.809178554455325	-0.46244511082827	-0.0167724140747313	0.933080799622852					1364	HGNC:2046						9	6.9789e-05	1.3716e-04			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	METTL27				NM_152559	3	73248919	73256846	7927	738	100	no	6	txStart-txEnd	5'UTR-3'UTR			73248919	73256846																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																																				155368	HGNC:19068											full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	TMEM270				NM_182504	4	73275488	73280220	4732	798	100	no	3	txStart-txEnd	5'UTR-3'UTR			73275488	73280220																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																																				135886	HGNC:23018											full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	ELN				NM_001278939	2	73442502	73484237	41735	2361	100	no	34	txStart-txEnd	5'UTR-3'UTR			73442502	73484237						Cutis laxa, AD, 123700 (3) AD;Supravalvar aortic stenosis, 185500 (3) AD		HI3:ELN;dbVar:nssv15128578;dbVar:nssv15770120;dbVar:nssv16214480;dbVar:nssv16214500;dbVar:nssv17172746;dbVar:nssv17971140;dbVar:nssv18786274;dbVar:nssv18791884;dbVar:nssv18791887;morbid:ELN	7:73442503-73484237;7:73442504-73484237;7:73442509-73483040;7:73442519-73449764;7:73442519-73483030;7:73444331-73476493;7:73449675-73483050;7:73461986-73483030;7:73471703-73483040;7:73482968-73483050;7:73482988-73484237															124	Cutis_laxa,_autosomal_dominant_1;ELN-related_disorder;Inborn_genetic_diseases;Supravalvar_aortic_stenosis;Williams_syndrome										IMH	7:66631329-143298938;7:67635774-98083201	0.5000																								3	0	8.62	0.1188507761401	-1.61408470478924	-1.04153334326364	-0.09395744769762	-0.0129976080826519	autosomal dominant cutis laxa;cutis laxa, autosomal dominant 1;familial thoracic aortic aneurysm and aortic dissection;supravalvular aortic stenosis	AD	Definitive;Limited;Strong;Supportive	10942104[PMID]_19844261[PMID];11175284;16085695[PMID]_18348261[PMID];18348261;19844261;21309044;23442826;27866049;28383366;31560829;8364568	2006	HGNC:3327	130160	Cutis laxa, AD, 123700 (3) AD;Supravalvar aortic stenosis, 185500 (3) AD	AD	yes		4	2.1429e-14	1.5200e-05			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	ELN-AS1				NR_183555	1	73473234	73476610	3376	0	0	NA	2	txStart-txEnd	UTR			73473234	73476610																								18	Cutis_laxa,_autosomal_dominant_1;ELN-related_disorder;Supravalvar_aortic_stenosis				dbVar	chr7:73447215-73480401	0.01				IMH	7:66631329-143298938;7:67635774-98083201	0.5000																																				107986809	HGNC:40212											full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	LIMK1				NM_002314	4	73498133	73536855	38722	1944	100	no	16	txStart-txEnd	5'UTR-3'UTR			73498133	73536855																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																								0	0	19.66	0.623604739936053	-0.79212126645541	-0.396805714672051	-0.48782967368913	2.85746490313868					3984	HGNC:6613						0	9.9937e-01	9.9090e-01			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	EIF4H				NM_022170	2	73588685	73611426	22741	747	100	no	7	txStart-txEnd	5'UTR-3'UTR			73588685	73611426																													dbVar	chr7:73504792-73813060	0.01				IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										21.78	0.339580839486745	-0.49261121282204	-0.247951312124761	-0.250271670703448	3.27930650064444					7458	HGNC:12741						2	4.3982e-01	9.2254e-01			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	MIR590				NR_030321	1	73605527	73605624	97	0	0	NA	1	txStart-txEnd	UTR			73605527	73605624																													dbVar	chr7:73504792-73813060	0.01				IMH	7:66631329-143298938;7:67635774-98083201	0.5000																																				693175	HGNC:32846											full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	LAT2				NM_014146	4	73624335	73644164	19829	732	100	no	13	txStart-txEnd	5'UTR-3'UTR			73624335	73644164																													dbVar	chr7:73504792-73813060	0.01				IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										88.46	0.592710857132059	-0.653878691847743	-0.292110083865967	0.385787155434006	-0.303087706786894					7462	HGNC:12749						4	2.2295e-04	6.9106e-04			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	RFC2				NM_181471	3	73645831	73668729	22898	1065	100	no	11	txStart-txEnd	5'UTR-3'UTR			73645831	73668729																													dbVar	chr7:73504792-73813060	0.01				IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										14.42	0.200864992787726	-0.430045328414053	-0.225638310792768	-0.430513909559958	1.53581142075512					5982	HGNC:9970						5	2.2054e-06	4.0421e-05			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	CLIP2				NM_003388	5	73703736	73820265	116529	3141	100	no	17	txStart-txEnd	5'UTR-3'UTR			73703736	73820265																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																										47.98	1.014608801418	-0.895566510532316	-0.401705936344982	-0.746648021563001	2.45305749434808					7461	HGNC:2586						0	9.9997e-01	9.9988e-01			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	GTF2IRD1				NM_001199207	2	73868235	74016931	148696	2931	100	no	27	txStart-txEnd	5'UTR-3'UTR			73868235	74016931																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																								0	0	47.51	1.77201404347458	-0.0325005901648791	0.491444562429841	0.977775575032158	2.53365459317235	neurodevelopmental disorder	AR	Limited	36308390	9569	HGNC:4661						1	9.0039e-01	9.9643e-01			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	MIR10525				NR_162116	1	74010294	74010353	59	0	0	NA	1	txStart-txEnd	UTR			74010294	74010353																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																																				113218504	HGNC:54015											full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	GTF2I				NM_032999	4	74072043	74175022	67347	943	31	yes	35	txStart-intron12	5'UTR-CDS	3733	3'	74072043	74139390																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																								0	0	33.5				0.964550444182401	4.23220859072885					2969	HGNC:4659						1	9.9592e-01	9.9935e-01			full=5
7_72726579_74139390_DEL_1	7	72726579	74139390	-1412812	DEL	Williams syndrom	Pathogenic	NA	split	q11.23	GTF2I-AS1				NR_110044	1	74103270	74143256	36120	0	0	NA	4	intron2-txEnd	UTR	2349	5'	74103270	74139390																																			IMH	7:66631329-143298938;7:67635774-98083201	0.5000																																				101926943	HGNC:55572											full=5
1_196756232_196799302_DEL_1	1	196756232	196799302	-43071	DEL		Benign	NA	full	q31.3	CFHR3;CFHR1	CFH	CFHR4	2																ASPM (morbid/RE=EA_enhancer);CFH (morbid/RE=GH_promoter_enhancer)							dbVar:nssv15121100	1:196757279-196796716							dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv18330594;dbVar:nssv15777262;dbVar:nssv15169967;dbVar:nssv15146388;dbVar:nssv15151024	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:181453461-213107248;1:182388774-249111240;1:185644664-221698833;1:187113114-224487119;1:195483440-249213000	0.02;0.02;0.02;0.04;0.14;0.06;0.12;0.12;0.08			dbVar:nssv15129680;dbVar:nssv16207750;dbVar:nssv15146573;dbVar:nssv15151287;dbVar:nssv17970297;dbVar:nssv17970308;dbVar:nssv15146667;dbVar:nssv18329566;dbVar:nssv18330283;dbVar:nssv15154062;dbVar:nssv15134156;dbVar:nssv18792867;dbVar:nssv15146075;dbVar:nssv15119768	1:146053395-249233096;1:177551194-199599056;1:179002041-199694025;1:179011315-199022759;1:179073387-200192265;1:179413480-201764737;1:189003615-199584994;1:189633886-199854163;1:193011754-199882947;1:195089819-197443021;1:195483440-197865624;1:196676029-196842326;1:196712877-196797546;1:196722207-196808505	0.04;0.20;0.21;0.22;0.20;0.19;0.41;0.42;0.63;1.83;1.81;25.90;48.80;49.91			DDD:3693	1:196724161-196912840	0.1822	1000g;DDD:3692;DDD:3693;DDD:3695;dbVar;dgv11e55;dgv6e203;dgv87e199;esv2421560;esv3588469;nsv514031;nsv517662	1:196711068-196937536;1:196719268-196810043;1:196722346-196822692;1:196723048-196815791;1:196724161-196912840;1:196727851-196939719;chr1:196728877-196808865;1:196728878-196808865;1:196728878-196808865;1:196731149-196901753;1:196733402-196813850;1:196738898-196801697	0.4486				IMH	1:17124869-234920285;1:108097960-232960701	0.3095			1:196748312-196757828 DDD:3701;	1:196724161-196912840 DDD:3693;1:196792551-196801251 DDD:3714			1:196719268-196810043 DDD:3692;1:196723048-196815791 esv2421560;1:196727851-196939719 dgv6e203;1:196728878-196808865 1000g;chr1:196729000-196789200 dbVar;1:196731149-196901753 dgv11e55;chr1:196735895-196764940 dbVar;1:196735896-196764940 esv3588471;1:196738898-196801697 nsv514031;chr1:196761000-196783900 dbVar;1:196772366-196774588 1000g;1:196772602-196794300 DDD:3705;1:196777327-196902217 DDD:3707;1:196782000-196788000 gnomAD-SV_v2.1_DEL_1_10685;1:196782356-196903873 1000g;1:196785120-196821192 DDD:3712;1:196790200-196805500 gnomAD-SV_v2.1_DEL_1_10686;	1:196711068-196937536 nsv517662;1:196722346-196822692 dgv87e199;1:196724161-196912840 DDD:3693;chr1:196728877-196808865 dbVar;1:196728878-196808865 esv3588469;1:196729000-196789200 gnomAD-SV_v2.1_DEL_1_10680;1:196733402-196813850 DDD:3695;1:196735896-196764940 1000g;1:196738624-196771280 DDD:3698;1:196748312-196757828 DDD:3701;chr1:196772365-196774588 dbVar;1:196772366-196774588 esv3588475;1:196773003-196909196 DDD:3706;chr1:196782000-196788000 dbVar;chr1:196782355-196903873 dbVar;1:196782356-196903873 esv3588478;chr1:196790200-196805500 dbVar;1:196798566-196802072 DDD:3720	0.350	0.285			1:196797933-196799242	L1MDa			1:196756102-196796319	1:196796320-196825045								98.26				1.07662990621103	1.30887789301822							605336;134371				yes	8	2.6297e-08	9.0932e-04	1.0	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (2 genes, +0.00);5F (+0.00)	5
1_196756232_196799302_DEL_1	1	196756232	196799302	-43071	DEL		Benign	NA	split	q31.3	CFHR3				NM_021023	6	196743969	196764537	8306	563	56	yes	6	intron3-txEnd	CDS-3'UTR	1114	3'	196756231	196764537																										DDD:3693	1:196724161-196912840	0.1822	1000g;DDD:3692;DDD:3693;DDD:3695;DDD:3698;dbVar;dgv11e55;dgv6e203;dgv87e199;esv2421560;esv3588469;esv3588471;gnomAD-SV_v2.1_DEL_1_10680;nsv514031;nsv517662	1:196711068-196937536;1:196719268-196810043;1:196722346-196822692;1:196723048-196815791;1:196724161-196912840;1:196727851-196939719;chr1:196728877-196808865;1:196728878-196808865;1:196728878-196808865;chr1:196729000-196789200;1:196729000-196789200;1:196731149-196901753;1:196733402-196813850;chr1:196735895-196764940;1:196735896-196764940;1:196735896-196764940;1:196738624-196771280;1:196738898-196801697	0.4486				IMH	1:17124869-234920285;1:108097960-232960701	0.3095																										98.26				0.6684477327677	0.697024247535932	hemolytic uremic syndrome, atypical, susceptibility to, 1		Limited	22626820	10878	HGNC:16980	605336	(Hemolytic uremic syndrome, atypical, susceptibility to), 235400 (3) AD,AR;(Macular degeneration, age-related, reduced risk of), 603075 (3) AD	AD;AD,AR		yes	8	1.7200e-11	1.2190e-05			full=5
1_196756232_196799302_DEL_1	1	196756232	196799302	-43071	DEL		Benign	NA	split	q31.3	CFHR1				NM_002113	3	196788860	196801319	10442	607	61	yes	6	txStart-intron4	5'UTR-CDS	327	3'	196788860	196799302																										DDD:3693	1:196724161-196912840	0.1822	1000g;DDD:3692;DDD:3693;DDD:3695;DDD:3706;DDD:3707;DDD:3712;dbVar;dgv11e55;dgv6e203;dgv87e199;esv2421560;esv3588469;esv3588478;nsv514031;nsv517662	1:196711068-196937536;1:196719268-196810043;1:196722346-196822692;1:196723048-196815791;1:196724161-196912840;1:196727851-196939719;chr1:196728877-196808865;1:196728878-196808865;1:196728878-196808865;1:196731149-196901753;1:196733402-196813850;1:196738898-196801697;1:196773003-196909196;1:196777327-196902217;chr1:196782355-196903873;1:196782356-196903873;1:196782356-196903873;1:196785120-196821192	0.4486				IMH	1:17124869-234920285;1:108097960-232960701	0.3095																										92.58				1.07662990621103	1.30887789301822	age related macular degeneration 1;dense deposit disease;hemolytic uremic syndrome, atypical, susceptibility to, 1	AD;AR	Limited;Supportive	19745068;19861685;23728178[PMID];23830046	3078	HGNC:4888	134371	(Hemolytic uremic syndrome, atypical, susceptibility to), 235400 (3) AD,AR;(Macular degeneration, age-related, reduced risk of), 603075 (3) AD	AD;AD,AR		yes	8	2.6297e-08	9.0932e-04			full=5
12_63935482_64130626_DEL_1	12	63935482	64130626	-195145	DEL	DPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)	Pathogenic	NA	full	q14.2	DPY19L2	AVPR1A	RXYLT1	1																RXYLT1 (morbid/RE=GH_enhancer+GH_promoter);TBK1 (morbid/RE=EA_enhancer)					Spermatogenic failure 9, 613958 (3) AR		dbVar:nssv15119764;dbVar:nssv16213932;morbid:DPY19L2	12:63952693-64062273;12:63952694-64062354;12:63989747-63989817							dbVar:nssv15161620;dbVar:nssv15161414;nssv15161422;dbVar:nssv15171852;dbVar:nssv15161798;dbVar:nssv15171855	12:2-133851895;12:173788-133777902;12:191620-133777645;12:282466-133773393;12:621221-133779118	0.15;0.15;0.15;0.15;0.15			dbVar:nssv15136921	12:61300933-66961857	3.45	1	Spermatogenic_failure_9										IMH	12:11501488-96031049;12:40933234-113477160	0.1070			12:63939159-64117235 1000g;12:63940549-64135811 DDD:38888;12:64069043-64136500 dgv280e214;12:63939159-64117235 1000g;12:63940549-64135811 DDD:38888;12:64069043-64136500 dgv280e214	12:63936386-64131550 gnomAD-SV_v2.1_DUP_12_34997;12:63939159-64117235 esv3629757;12:64020291-64020367 DDD:38896;12:63936386-64131550 gnomAD-SV_v2.1_DUP_12_34997;12:63939159-64117235 esv3629757;12:64020291-64020367 DDD:38896			chr12:63936000-63986000 dbVar;chr12:63946269-64141505 dbVar;chr12:63946732-63946956 dbVar;12:63946733-63946956 IMH;chr12:63959839-63959910 dbVar;12:64020291-64020367 DDD:38896;chr12:64069257-64069348 dbVar;chr12:64076528-64076585 dbVar;chr12:64116494-64116881 dbVar;chr12:63923277-64119251 dbVar;chr12:63939158-64117235 dbVar;12:63946730-63946956 esv2662353;12:63946732-63946956 gnomAD-SV_v2.1_DEL_12_129265;chr12:63950172-63950241 dbVar;chr12:64015848-64018740 dbVar;chr12:64065000-64130000 dbVar;chr12:64069869-64069961 dbVar;chr12:64103835-64106468 dbVar;chr12:64122000-64127000 dbVar	chr12:63923277-64119251 dbVar;chr12:63939158-64117235 dbVar;12:63946730-63946956 esv2662353;12:63946732-63946956 gnomAD-SV_v2.1_DEL_12_129265;chr12:63950172-63950241 dbVar;chr12:64015848-64018740 dbVar;chr12:64065000-64130000 dbVar;chr12:64069869-64069961 dbVar;chr12:64103835-64106468 dbVar;chr12:64122000-64127000 dbVar;chr12:63936000-63986000 dbVar;chr12:63946269-64141505 dbVar;chr12:63946732-63946956 dbVar;12:63946733-63946956 IMH;chr12:63959839-63959910 dbVar;12:64020291-64020367 DDD:38896;chr12:64069257-64069348 dbVar;chr12:64076528-64076585 dbVar;chr12:64116494-64116881 dbVar	0.530	0.430	12:63935369-63935656	AluSq2	12:64130409-64130696	AluSq2			12:63923419-63951619	12:64119249-64146247								81.13				1.02618176351368	1.66555804568279							613893			yes		4	1.0936e-13	7.0294e-05	1.0	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (1 gene, +0.00);5F (+0.00)	5
12_63935482_64130626_DEL_1	12	63935482	64130626	-195145	DEL	DPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)	Pathogenic	NA	split	q14.2	DPY19L2				NM_173812	5	63952692	64062273	109581	2277	100	no	22	txStart-txEnd	5'UTR-3'UTR			63952692	64062273						Spermatogenic failure 9, 613958 (3) AR		dbVar:nssv16213932;morbid:DPY19L2	12:63952693-64062273;12:63989747-63989817															1	Spermatogenic_failure_9	1000g;DDD:38888;esv3629757;gnomAD-SV_v2.1_DUP_12_34997	12:63936386-64131550;12:63939159-64117235;12:63939159-64117235;12:63940549-64135811	0.0257	dbVar	chr12:63923277-64119251;chr12:63939158-64117235;chr12:63946269-64141505	0.01				IMH	12:11501488-96031049;12:40933234-113477160	0.1070																										81.13				1.02618176351368	1.66555804568279	male infertility due to globozoospermia;spermatogenic failure 9	AR	Strong;Supportive	17008355;21397063;21397063[PMID]_22571172[PMID];21397064;22627659;22653751;25755131;25780569	283417	HGNC:19414	613893	Spermatogenic failure 9, 613958 (3) AR	AR	yes		4	1.0936e-13	7.0294e-05			full=5
16_1565630_1571297_DUP_1	16	1565630	1571297	5668	DUP	IFT140 tandem duplication	Pathogenic	NA	full	p13.3	IFT140	TELO2	TMEM204	1																			dbVar:nssv17973053	16:1568198-1570829			dbVar:nssv16208781	16:1568218-1570809					CRANIOECTODERMAL_DYSPLASIA_5|Saldino-Mainzer_syndrome|Cranioectodermal_dysplasia|Joubert_syndrome_with_Jeune_asphyxiating_thoracic_dystrophy		dbVar:nssv15158812;dbVar:nssv15148703;dbVar:nssv15147067;dbVar:nssv15148669;dbVar:nssv15147068;dbVar:nssv17649874;dbVar:nssv15152396;dbVar:nssv15150758;dbVar:nssv15149904;dbVar:nssv15154767;dbVar:nssv16254459;dbVar:nssv15149503;dbVar:nssv15150639;nssv15151292;dbVar:nssv15158813;dbVar:nssv15158224;dbVar:nssv15147425;dbVar:nssv15147959;dbVar:nssv15147069;dbVar:nssv15148094;dbVar:nssv15147790;dbVar:nssv8639650;dbVar:nssv15606077;dbVar:nssv18326373;dbVar:nssv15146792;dbVar:nssv15147071;dbVar:nssv15145754;dbVar:nssv15155466;dbVar:nssv17955877;dbVar:nssv18841986;CLN:513805	16:61452-90294632;16:69194-90274381;16:73142-11390552;16:78802-9169448;16:79942-2610461;16:84486-5251013;16:85881-11209288;16:85881-19806921;16:85881-22442007;16:85881-3216551;16:85881-5249457;16:85881-9883129;16:85882-90155062;16:88166-90163275;16:88166-90274695;16:93733-13420663;16:96767-11619372;16:96767-3264623;16:96767-4297186;16:97134-5122974;16:102840-28327676;16:109979-4316797;16:111044-6627459;16:716663-15836961;16:1271652-2283774;16:1328823-1969149;16:1505185-4415346;16:1561202-1573469;16:1565604-1571309;16:1565629-1571298	0.01;0.01;0.05;0.06;0.22;0.11;0.05;0.03;0.03;0.18;0.11;0.06;0.01;0.01;0.01;0.04;0.05;0.18;0.13;0.11;0.02;0.13;0.09;0.04;0.56;0.89;0.19;46.20;99.33;99.96	Cranioectodermal dysplasia 5, 621180 (3) AR;Retinitis pigmentosa 80, 617781 (3) AR;Short-rib thoracic dysplasia 9 with or without polydactyly, 266920 (3) AR;Polycystic kidney disease 9, susceptibility to, 621164 (3) AD		dbVar:nssv15173022;dbVar:nssv15145815;dbVar:nssv15147164;dbVar:nssv15155465;dbVar:nssv15776300;dbVar:nssv15146945;dbVar:nssv15148829;dbVar:nssv15148018;dbVar:nssv15145816;dbVar:nssv18790909;nssv18790910;dbVar:nssv15771714;dbVar:nssv16214818;dbVar:nssv18792796;dbVar:nssv16214651;morbid:IFT140	16:61452-1593645;16:73142-1762524;16:73142-1823350;16:85881-1875694;16:85881-2053328;16:88166-1715454;16:96723-1917328;16:96767-1594015;16:96767-2047583;16:256303-1657267;16:624056-2115656;16:624056-2148005;16:811897-2130379;16:1203719-2185710;16:1560428-1662073	0.37;0.34;0.32;0.32;0.29;0.35;0.31;0.38;0.29;0.40;0.38;0.37;0.43;0.58;5.58	14	Jeune_thoracic_dystrophy;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_80;Saldino-Mainzer_syndrome																					0.520	0.500	16:1565418-1565697;16:1565698-1565893	AluJr;L1MEf	16:1571134-1571365	AluJb												69.24	-1.52736818830718	-0.448946429663129	-0.844654865976432	-0.922111894578121	-1.23259677674915							614620			yes	yes	4	9.9140e-24	9.1377e-18	1.0	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_gain_source, +1.00);2I-3 (IFT140, +0.00);3A (1 gene, +0.00);5F (+0.00)	5
16_1565630_1571297_DUP_1	16	1565630	1571297	5668	DUP	IFT140 tandem duplication	Pathogenic	NA	split	p13.3	IFT140				NM_014714	4	1560427	1662073	5668	729	16	no	31	intron26-intron30	CDS	488	3'	1565629	1571297				dbVar:nssv17973053	16:1568198-1570829			dbVar:nssv16208781	16:1568218-1570809															14	Jeune_thoracic_dystrophy;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_80;Saldino-Mainzer_syndrome																																				30		69.24	-1.52736818830718	-0.448946429663129	-0.844654865976432	-0.922111894578121	-1.23259677674915	IFT140-related recessive ciliopathy;Jeune syndrome;Leber congenital amaurosis;autosomal dominant polycystic kidney disease;retinitis pigmentosa;retinitis pigmentosa 80;short-rib thoracic dysplasia 9 with or without polydactyly	AD;AR	Definitive;Strong;Supportive	154653;22503633;22503633[PMID];22503633[PMID]_23418020[PMID]_24009529[PMID];23418020;24009529;26216056;26216056[PMID];26968735;30479745;31034313	9742	HGNC:29077	614620	Cranioectodermal dysplasia 5, 621180 (3) AR;Retinitis pigmentosa 80, 617781 (3) AR;Short-rib thoracic dysplasia 9 with or without polydactyly, 266920 (3) AR;(Polycystic kidney disease 9, susceptibility to), 621164 (3) AD	AD;AR	yes	yes	4	9.9140e-24	9.1377e-18			full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	full	p12	COX10;CDRT15;HS3ST3B1;MGC12916;CDRT7;LOC101928475;CDRT8;PMP22;MIR4731;TEKT3;CDRT4;TVP23C-CDRT4;CDRT3;TVP23C	COX10-DT	FBXW10B	14																ABCG8 (morbid/RE=mTL_miRNA);ACBD5 (morbid/RE=mTL_miRNA);ACVRL1 (HI=3/morbid/RE=mTL_miRNA);AMH (morbid/RE=mTL_miRNA);ANKS6 (morbid/RE=mTL_miRNA);ATL3 (morbid/RE=mTL_miRNA);ATP9A (morbid/RE=mTL_miRNA);CABP4 (morbid/RE=mTL_miRNA);CACNA1C (morbid/RE=mTL_miRNA);CACNA2D1 (morbid/RE=mTL_miRNA);CAVIN1 (morbid/RE=mTL_miRNA);CD4 (morbid/RE=mTL_miRNA);CDT1 (morbid/RE=mTL_miRNA);CEP104 (morbid/RE=mTL_miRNA);CHD7 (HI=3/morbid/RE=mTL_miRNA);CHEK1 (morbid/RE=mTL_miRNA);CHST6 (morbid/RE=mTL_miRNA);CISD2 (morbid/RE=mTL_miRNA);CPT1A (morbid/RE=mTL_miRNA);CREB1 (morbid/RE=mTL_miRNA);CRIPT (morbid/RE=mTL_miRNA);CYB5A (morbid/RE=mTL_miRNA);CYCS (morbid/RE=mTL_miRNA);DNAJB13 (morbid/RE=mTL_miRNA);DNAJB4 (morbid/RE=mTL_miRNA);DNAL1 (morbid/RE=mTL_miRNA);DPP9 (morbid/RE=mTL_miRNA);EIF2B2 (morbid/RE=mTL_miRNA);ELAC2 (morbid/RE=ABC_enhancer);EMC1 (morbid/RE=mTL_miRNA);FANCA (morbid/RE=mTL_miRNA);GAN (morbid/RE=mTL_miRNA);GATAD2B (HI=3/morbid/RE=mTL_miRNA);GNB5 (morbid/RE=mTL_miRNA);GOLGA2 (morbid/RE=mTL_miRNA);GPRC5B (morbid/RE=mTL_miRNA);HCFC1 (morbid/RE=mTL_miRNA);HCN4 (morbid/RE=mTL_miRNA);HFE (morbid/RE=mTL_miRNA);IKBKG (HI=3/morbid/RE=mTL_miRNA);IRAK4 (morbid/RE=mTL_miRNA);ISCA2 (morbid/RE=mTL_miRNA);KCND3 (morbid/RE=mTL_miRNA);KCNH2 (HI=3/morbid/RE=mTL_miRNA);KDM6B (HI=3/morbid/RE=mTL_miRNA);KIAA1549 (morbid/RE=mTL_miRNA);LDHD (morbid/RE=mTL_miRNA);LIAS (morbid/RE=mTL_miRNA);LNPK (morbid/RE=mTL_miRNA);LRTOMT (morbid/RE=mTL_miRNA)...			dbVar:nssv15123319;nssv18792872;dbVar:nssv15123460;dbVar:nssv15124534;dbVar:nssv15130870;dbVar:nssv15132574;nssv15139980;nssv16091758;dbVar:nssv15143888;dbVar:nssv15144711;dbVar:nssv15605910;dbVar:nssv15770494;dbVar:nssv15770609;dbVar:nssv15770794;dbVar:nssv16216948;dbVar:nssv17171394;dbVar:nssv17171395;dbVar:nssv17171396;dbVar:nssv17517518;dbVar:nssv17968761;dbVar:nssv17971796;dbVar:nssv18788963	17:14104013-15422557;17:14111773-15442066;17:14139890-15406546;17:14413313-15169915;17:15036413-15036413;17:15132095-15169674;17:15133085-15164054;17:15133095-15164078;17:15133097-15165152;17:15133098-15164054;17:15133961-15169915;17:15134215-15162530;17:15134215-15164064;17:15134229-15164050;17:15134234-15164044;17:15134235-15164044;17:15142769-15164064;17:15142779-15164054;17:15162412-15406546	?Neuropathy, inflammatory demyelinating, 139393 (3) ?AD;Charcot-Marie-Tooth disease, type 1A, 118220 (3) AD;Charcot-Marie-Tooth disease, type 1E, 118300 (3) AD;Dejerine-Sottas disease, 145900 (3) AD,AR;Neuropathy, recurrent, with pressure palsies, 162500 (3) AD;Roussy-Levy syndrome, 180800 (3) AD;Spermatogenic failure 81, 620277 (3) AR		HI3:PMP22;dbVar:nssv15119700;nssv15120161;dbVar:nssv15123358;dbVar:nssv15124100;dbVar:nssv15124536;dbVar:nssv15130148;nssv15131578;dbVar:nssv15131641;dbVar:nssv15132056;dbVar:nssv15133540;dbVar:nssv15152434;dbVar:nssv15605873;dbVar:nssv15770639;dbVar:nssv16212046;dbVar:nssv16213644;dbVar:nssv17171685;dbVar:nssv17171686;dbVar:nssv17171687;dbVar:nssv17517519;dbVar:nssv17968760;dbVar:nssv17971249;dbVar:nssv17971279;dbVar:nssv17972656;dbVar:nssv17974454;dbVar:nssv17974892;dbVar:nssv18788962;morbid:PMP22;morbid:TEKT3	17:14110044-14111913;17:14111773-15442066;17:14128551-15422557;17:14139890-15142928;17:14215740-15422582;17:14763747-15242181;17:15133085-15134407;17:15133085-15142938;17:15133085-15164054;17:15133095-15164078;17:15133097-15168643;17:15133098-15164054;17:15133961-15169915;17:15134215-15164064;17:15134234-15164044;17:15134235-15164044;17:15138536-15168643;17:15142769-15142948;17:15142779-15142938;17:15142779-15164054;17:15142930-15164044;17:15152792-15162532;17:15162392-15164044;17:15162402-15162520;17:15162402-15162523;17:15162402-15164054;17:15207129-15244914					17p12 recurrent (HNPP/CMT1A) region (includes PMP22)		dbVar:nssv15148946;dbVar:nssv15150353;dbVar:nssv15149908;nssv15152170;dbVar:nssv15159024;dbVar:nssv15160732;dbVar:nssv15159027;dbVar:nssv15121114;dbVar:nssv17976715;dbVar:nssv15133502;dbVar:nssv15605908;dbVar:nssv17955950;dbVar:nssv18330199;dbVar:nssv15127850;dbVar:nssv15155527;dbVar:nssv18330563;dbVar:nssv16215327;dbVar:nssv15152221;dbVar:nssv15155528;dbVar:nssv15152212;dbVar:nssv15151828;dbVar:nssv15138362;dbVar:nssv18330766;dbVar:nssv15152433;dbVar:nssv15141972;dbVar:nssv15137438;dbVar:nssv15138198;dbVar:nssv15151261;dbVar:nssv15152245;dbVar:nssv15139258;nssv15130449;dbVar:nssv18329572;dbVar:nssv18330190;dbVar:nssv18330250;dbVar:nssv18329615;dbVar:nssv15133504;dbVar:nssv15138548;dbVar:nssv15133503;dbVar:nssv17976450;dbVar:nssv18842067;dbVar:nssv18792739;dbVar:nssv18792799;dbVar:nssv17955866;TS3:ISCA-37436;dbVar:nssv17649964;dbVar:nssv15123339;dbVar:nssv15141042;dbVar:nssv15122626;dbVar:nssv16867389;dbVar:nssv15140957;dbVar:nssv15141757;dbVar:nssv15123522;dbVar:nssv15159072;dbVar:nssv15605912;dbVar:nssv15137903;dbVar:nssv15123444;dbVar:nssv16207305;dbVar:nssv15136705;dbVar:nssv15134920;dbVar:nssv15132415;dbVar:nssv15133505	17:526-14667519;17:526-15027737;17:527-81041938;17:7215-81058310;17:8548-81060040;17:12345-81057996;17:10795577-17867596;17:11819315-17795978;17:14029614-15562901;17:14063252-15449627;17:14073285-15442296;17:14073564-15479923;17:14073604-15482773;17:14076431-15491532;17:14078284-15479940;17:14079631-15370444;17:14083055-15463054;17:14083055-15479940;17:14083055-15491532;17:14083055-15491533;17:14083055-15567669;17:14083056-15483608;17:14085653-15512120;17:14087934-15437330;17:14087934-15484358;17:14087934-15484858;17:14087934-15490100;17:14087934-15491532;17:14087934-15500645;17:14087935-15479940;17:14087935-15483608;17:14087935-15484358;17:14087935-15484630;17:14090301-15467184;17:14090301-15473590;17:14090301-15482240;17:14093319-15476314;17:14095257-15492591;17:14095307-15466762;17:14095307-15472344;17:14096090-15492591;17:14097916-15422952;17:14098197-15442500;17:14098278-15471179;17:14098661-15501133;17:14099743-15471179;17:14100119-15455297;17:14100119-15458649;17:14100119-15492400;17:14100119-15492444;17:14101030-15504740;17:14105875-15611546;17:14111773-15482872;17:14139858-15707850;17:14195643-15545880;17:15093601-15856310;17:15113718-18184130;17:15138003-20524013;17:15162482-20828612	3.87;6.17;1.66;1.66;1.66;1.66;18.98;22.45;87.52;96.80;98.02;95.42;95.23;94.83;95.74;98.41;97.24;96.07;95.28;95.28;90.39;95.82;94.07;99.10;96.10;96.06;95.71;95.61;94.99;96.40;96.15;96.10;96.08;97.46;97.01;96.41;97.03;96.04;97.85;97.45;96.09;99.83;99.82;97.75;95.68;97.85;99.02;98.78;96.38;96.38;95.54;88.74;97.02;83.05;92.31;45.69;10.69;5.65;4.93	17p12 recurrent (HNPP/CMT1A) region (includes PMP22);Mitochondrial complex IV deficiency, nuclear type 3, 619046 (3) AR		morbid:COX10;dbVar:nssv15129689;dbVar:nssv17976967;dbVar:nssv18330114;dbVar:nssv15145216;dbVar:nssv18330761;dbVar:nssv15138335;dbVar:nssv18330252;dbVar:nssv15145035;dbVar:nssv15141682;dbVar:nssv15141099;dbVar:nssv15138794;dbVar:nssv18330872;dbVar:nssv15137498;nssv15155529;dbVar:nssv15137504;dbVar:nssv18330269;dbVar:nssv18842062;dbVar:nssv15141647;HI3:ISCA-37436;dbVar:nssv18330706;dbVar:nssv15150275;dbVar:nssv15129116;dbVar:nssv15123772;dbVar:nssv15141918;dbVar:nssv15159071;nssv15605909;dbVar:nssv15123331;dbVar:nssv15605911;dbVar:nssv18786371;dbVar:nssv15605913;dbVar:nssv16255829;dbVar:nssv15136096;dbVar:nssv15136245;dbVar:nssv15126994;dbVar:nssv15134560;dbVar:nssv15137984	17:13972821-14111994;17:14073604-15482773;17:14076990-15473312;17:14077820-15491532;17:14082226-15421861;17:14082946-15484858;17:14083055-15475087;17:14083056-15484859;17:14086859-15476561;17:14087788-15473312;17:14087788-15483608;17:14087788-15490100;17:14087789-15484858;17:14087934-15484858;17:14087934-15491532;17:14087935-15491532;17:14095257-15477547;17:14095640-15274712;17:14097916-15422952;17:14098248-15475654;17:14098661-15500645;17:14098787-15495266;17:14099743-15471179;17:14100119-15455238;17:14101030-15449627;17:14101030-15482817;17:14104013-15551814;17:14110128-15472344;17:14110452-15449097;17:14111755-15442178;17:14111773-15482872;17:14111773-15491748;17:14112032-15482773;17:14574436-15856310;17:14970117-17375771	8.53;95.23;96.11;94.92;98.66;95.72;96.40;95.73;96.56;96.85;96.14;95.70;96.05;96.06;95.61;95.61;97.08;99.62;99.83;97.43;95.72;96.10;97.85;99.03;99.44;97.05;92.42;97.78;99.47;99.99;97.02;96.40;97.03;67.68;19.62	60	Autosomal_recessive_Dejerine-Sottas_syndrome;Charcot-Marie-Tooth_disease;Charcot-Marie-Tooth_disease,_type_I;Charcot-Marie-Tooth_disease,_type_IA;Charcot-Marie-Tooth_disease_type_1E;Charcot-Marie-Tooth_disease_type_2E;DEJERINE-SOTTAS_SYNDROME,_AUTOSOMAL_DOMINANT;Dejerine-Sottas_disease;Guillain-Barre_syndrome,_familial;Hereditary_liability_to_pressure_palsies;Inborn_genetic_diseases;Mitochondrial_complex_4_deficiency,_nuclear_type_3;Mitochondrial_complex_IV_deficiency,_nuclear_type_1;Roussy-Lévy_syndrome				dbVar	chr17:14093499-15486000	0.01									17:14191081-14198547 DDD:48802;17:14224375-14483419 esv3640026;17:14668590-15084842 esv3640046	17:14191081-14191901 DDD:48801;17:14224375-14483419 1000g;17:14668590-15084842 1000g			chr17:14096682-14108514 dbVar;chr17:14126839-14220873 dbVar;chr17:14155625-14155942 dbVar;chr17:14189910-14191555 dbVar;17:14189911-14191555 DDD:48799;17:14189911-14191555 esv2665541;17:14189911-14191557 1000g;17:14189912-14191555 IMH;17:14191081-14191901 DDD:48801;chr17:14220258-14221199 dbVar;17:14240918-14242023 DDD:48803;17:14240923-14242032 1000g;17:14240941-14242023 IMH;chr17:14241867-14248195 dbVar;chr17:14269249-14271950 dbVar;chr17:14277792-14278679 dbVar;chr17:14300414-14308117 dbVar;chr17:14314642-14320048 dbVar;chr17:14315900-14328444 dbVar;17:14332272-14332576 gnomAD-SV_v2.1_DEL_17_158748...	chr17:14093499-15486000 dbVar;chr17:14105499-14108091 dbVar;chr17:14132469-14133456 dbVar;chr17:14186324-14196555 dbVar;chr17:14189910-14191557 dbVar;chr17:14189911-14191555 dbVar;17:14189911-14191555 gnomAD-SV_v2.1_DEL_17_158736;17:14189911-14191557 esv3640023;17:14190834-14191460 nsv574421;chr17:14210420-14210623 dbVar;chr17:14224374-14483419 dbVar;chr17:14240922-14242032 dbVar;17:14240923-14242032 esv3640027;chr17:14240941-14242023 dbVar;chr17:14256280-14258428 dbVar;chr17:14272755-14288592 dbVar;chr17:14284612-14628667 dbVar;chr17:14300914-14367997 dbVar;chr17:14314678-14320063 dbVar;chr17:14332272-14332576 dbVar...	0.505	0.420								17:15422954-15470900						3		96.58	-2.62354415217069	-0.276965016632095	-1.64032033771268	3.6772325764896	4.17517843763452							602125;601097;612683			yes	yes	1	9.0958e-01	8.3315e-01	1.0	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_gain_source, +1.00);2H-2 (PMP22/TEKT3, +0.00);2J (COX10, +0.00);2L (TVP23C/TVP23C-CDRT4, +0.00);3A (14 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)	5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	COX10				NM_001303	4	13972820	14111994	11876	404	30	yes	7	intron6-txEnd	CDS-3'UTR	4580	5'	14100118	14111994								dbVar:nssv15124536	17:14110044-14111913															1	Mitochondrial_complex_4_deficiency,_nuclear_type_3;Mitochondrial_complex_IV_deficiency,_nuclear_type_1				dbVar	chr17:14093499-15486000	0.01																														30		60.22	-2.62354415217069	-2.20885612270982	-2.47162789907313	0.16322796385632	0.511864222455301	Leigh syndrome;cytochrome-c oxidase deficiency disease;mitochondrial complex 4 deficiency, nuclear type 3;mitochondrial disease	AR	Definitive;Moderate;Strong;Supportive	10767350;10767350[PMID]_12928484[PMID]_15455402[PMID];12928484;15455402;16103131;22622581;24100867	1352	HGNC:2260	602125	Mitochondrial complex IV deficiency, nuclear type 3, 619046 (3) AR	AR	yes		3	8.4050e-02	6.4657e-01			full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	CDRT15				NM_001007530	3	14138989	14140179	1190	567	100	no	3	txStart-txEnd	5'UTR-3'UTR			14138989	14140179																													dbVar	chr17:14093499-15486000;chr17:14126839-14220873	0.01																																96.58	-2.62354415217069	-2.20416703243077	-2.47162789907313	1.67462394349301	1.73432863871862					146822	HGNC:14395						9	1.2820e-06	7.5064e-03			full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	HS3ST3B1				NM_006041	3	14204397	14252721	48324	1173	100	no	2	txStart-txEnd	5'UTR-3'UTR			14204397	14252721																													dbVar	chr17:14093499-15486000	0.01																																42.95	-2.62354415217069	-0.276965016632095	-1.64032033771268	3.6772325764896	4.17517843763452					9953	HGNC:5198						4	2.9349e-01	8.5455e-02			full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	MGC12916				NR_026880	1	14207056	14209062	2006	0	0	NA	1	txStart-txEnd	UTR			14207056	14209062																													dbVar	chr17:14093499-15486000;chr17:14126839-14220873	0.01																																																						full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	CDRT7				NR_033371	1	14934291	14935274	983	0	0	NA	3	txStart-txEnd	UTR			14934291	14935274																										1000g;esv3640046	17:14668590-15084842;17:14668590-15084842	0.2720	dbVar	chr17:14093499-15486000;chr17:14668589-15084842;chr17:14920183-14938805;chr17:14931264-14977742	0.01																																										94150	HGNC:14386											full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	LOC101928475				NR_135638	1	14954671	14955593	922	0	0	NA	1	txStart-txEnd	UTR			14954671	14955593																										1000g;esv3640046	17:14668590-15084842;17:14668590-15084842	0.2720	dbVar	chr17:14093499-15486000;chr17:14668589-15084842;chr17:14931264-14977742	0.01																																																						full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	CDRT8				NR_103559	1	15008301	15009504	1203	0	0	NA	2	txStart-txEnd	UTR			15008301	15009504																										1000g;esv3640046	17:14668590-15084842;17:14668590-15084842	0.2720	dbVar	chr17:14093499-15486000;chr17:14668589-15084842;chr17:14995672-15057656;chr17:14995771-15057475	0.01																																										94151	HGNC:14387											full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	PMP22				NM_000304	4	15133095	15168643	35548	483	100	no	5	txStart-txEnd	5'UTR-3'UTR			15133095	15168643				dbVar:nssv15130870;dbVar:nssv15770494;dbVar:nssv15770609;dbVar:nssv15770794;dbVar:nssv17171395;dbVar:nssv17171396;dbVar:nssv17517518;dbVar:nssv17971796;dbVar:nssv18788963	17:15133097-15165152;17:15133098-15164054;17:15134215-15162530;17:15134215-15164064;17:15134229-15164050;17:15134234-15164044;17:15134235-15164044;17:15142769-15164064;17:15142779-15164054	?Neuropathy, inflammatory demyelinating, 139393 (3) ?AD;Charcot-Marie-Tooth disease, type 1A, 118220 (3) AD;Charcot-Marie-Tooth disease, type 1E, 118300 (3) AD;Dejerine-Sottas disease, 145900 (3) AD,AR;Neuropathy, recurrent, with pressure palsies, 162500 (3) AD;Roussy-Levy syndrome, 180800 (3) AD		HI3:PMP22;dbVar:nssv15119700;nssv15120161;dbVar:nssv15131641;dbVar:nssv15133540;dbVar:nssv15770639;dbVar:nssv16212046;dbVar:nssv17171685;dbVar:nssv17171686;dbVar:nssv17171687;dbVar:nssv17517519;dbVar:nssv17968760;dbVar:nssv17971279;dbVar:nssv17974892;dbVar:nssv18788962;morbid:PMP22	17:15133097-15168643;17:15133098-15164054;17:15134215-15164064;17:15134234-15164044;17:15134235-15164044;17:15138536-15168643;17:15142769-15142948;17:15142779-15142938;17:15142779-15164054;17:15142930-15164044;17:15152792-15162532;17:15162392-15164044;17:15162402-15162520;17:15162402-15162523;17:15162402-15164054															59	Autosomal_recessive_Dejerine-Sottas_syndrome;Charcot-Marie-Tooth_disease;Charcot-Marie-Tooth_disease,_type_I;Charcot-Marie-Tooth_disease,_type_IA;Charcot-Marie-Tooth_disease_type_1E;Charcot-Marie-Tooth_disease_type_2E;DEJERINE-SOTTAS_SYNDROME,_AUTOSOMAL_DOMINANT;Dejerine-Sottas_disease;Guillain-Barre_syndrome,_familial;Hereditary_liability_to_pressure_palsies;Inborn_genetic_diseases;Roussy-Lévy_syndrome				dbVar	chr17:14093499-15486000	0.01																														3	0	40.48	-2.62354415217069	-1.55852578268999	-2.47162789907313	-0.424806725478425	1.07197498670855	Charcot-Marie-Tooth disease type 1A;Charcot-Marie-Tooth disease type 1E;Charcot-Marie-Tooth disease type 3;hereditary neuropathy with liability to pressure palsies	AD	Definitive;Moderate;Strong;Supportive	10330345;118220;12578939;162500;18698610[PMID]_12090401[PMID];20301384[PMID];23224996;24175617;601097;7931393;8355122;9143558;NULL	5376	HGNC:9118	601097	?Neuropathy, inflammatory demyelinating, 139393 (3) ?AD;Charcot-Marie-Tooth disease, type 1A, 118220 (3) AD;Charcot-Marie-Tooth disease, type 1E, 118300 (3) AD;Dejerine-Sottas disease, 145900 (3) AD,AR;Neuropathy, recurrent, with pressure palsies, 162500 (3) AD;Roussy-Levy syndrome, 180800 (3) AD	?AD;AD;AD,AR	yes	yes	1	9.0958e-01	8.3315e-01			full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	MIR4731				NR_039884	1	15154943	15155013	70	0	0	NA	1	txStart-txEnd	UTR			15154943	15155013																													dbVar	chr17:14093499-15486000;chr17:15070858-15163533;chr17:15112458-15159531;chr17:15150741-15155583	0.01																																										100616125	HGNC:41597											full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	TEKT3				NM_031898	3	15207128	15244914	37786	1473	100	no	9	txStart-txEnd	5'UTR-3'UTR			15207128	15244914						Spermatogenic failure 81, 620277 (3) AR		morbid:TEKT3	17:15207129-15244914																				dbVar	chr17:14093499-15486000	0.01																																59.06	-2.62354415217069	-1.25885348060374	-2.47162789907313	0.241972873531725	-0.405588628410555	spermatogenic failure 81		Limited	18951373;36708031	64518	HGNC:14293	612683	Spermatogenic failure 81, 620277 (3) AR	AR	yes		7	1.9845e-17	3.1995e-14			full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	CDRT4				NM_001204477	2	15339331	15370935	31604	459	100	no	4	txStart-txEnd	5'UTR-3'UTR			15339331	15370935																													dbVar	chr17:14093499-15486000;chr17:15287341-15482010	0.01																																86.77	-2.62354415217069	-2.24141606178004	-2.47162789907313	-0.193191475026352	0.152950560142403					284040	HGNC:14383						9	9.5789e-02	2.4429e-01			full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	TVP23C-CDRT4				NM_001204478	2	15339331	15466797	102735	33	6	no	7	intron5-txEnd	CDS-3'UTR	7032	5'	15339331	15442066																													dbVar	chr17:14093499-15486000;chr17:15287341-15482010	0.01																																52.33	-2.62354415217069	-2.53125239294469	-2.47162789907313	0.433099426603836	0.962176598220999					100533496	HGNC:42961						7	8.7378e-07	2.3623e-03			full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	CDRT3				NR_146601	1	15373624	15374150	526	0	0	NA	1	txStart-txEnd	UTR			15373624	15374150																													dbVar	chr17:14093499-15486000;chr17:15287341-15482010	0.01																																										94145	HGNC:14382											full=5
17_14100119_15442066_DUP_1	17	14100119	15442066	1341948	DUP	PMP22 (CMT1A)	Pathogenic	NA	split	p12	TVP23C				NM_145301	3	15405577	15466797	36489	369	44	no	6	intron5-txEnd	CDS-3'UTR	7032	5'	15405577	15442066																													dbVar	chr17:14093499-15486000;chr17:15287341-15482010	0.01																																49.2	-2.62354415217069	-2.53125239294469	-2.47162789907313	0.622094281610252	0.322678575541803					201158	HGNC:30453						7	2.3189e-05	1.3674e-04			full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	full	p14.2-p14.1	LINC00698;SYNPR;SYNPR-AS1;SNTN;CDHR18P;C3orf49;THOC7;THOC7-AS1;ATXN7;SCAANT1;PSMD6-AS2;PSMD6;PSMD6-AS1;PRICKLE2-AS1;LINC00994;PRICKLE2;PRICKLE2-AS2;PRICKLE2-AS3;PRICKLE2-DT;ADAMTS9;ADAMTS9-AS1;ADAMTS9-AS2;LINC02040	CADPS	MAGI1	23																SLC25A26 (morbid/RE=ABC_enhancer)					Spinocerebellar ataxia 7, 164500 (3) AD		morbid:ATXN7	3:63953470-63989138							dbVar:nssv15162889;dbVar:nssv15164144;dbVar:nssv15149891;nssv15151839	3:60175-197948027;3:61496-197838262;3:61893-197851986	1.18;1.18;1.18			dbVar:nssv15146214;dbVar:nssv15774780;dbVar:nssv15148889;dbVar:nssv15147494;dbVar:nssv17956097;dbVar:nssv16207905;dbVar:nssv15150232;dbVar:nssv15146193;dbVar:nssv15120308	3:54079046-66046136;3:57076137-65716956;3:57174453-90309110;3:57416266-64870197;3:59332509-70686155;3:60449668-65561638;3:60526227-63742930;3:61956522-68514983;3:64746925-78459248	19.47;26.96;7.03;25.91;20.52;45.57;24.99;35.52;3.81	2	Progressive_myoclonic_epilepsy_type_5;See_cases										IMH	3:1200531-154949082;3:38627146-149162150	0.3422			3:63725720-63725786 gnomAD-SV_v2.1_DUP_3_8770;3:64533160-64535613 gnomAD-SV_v2.1_DUP_3_8779	3:63224614-63225527 IMH;3:64533160-64535613 IMH			chr3:62952324-62973934 dbVar;chr3:62959476-62994696 dbVar;chr3:62959774-62994551 dbVar;chr3:62986070-62987837 dbVar;chr3:63006837-63007330 dbVar;chr3:63072271-63072321 dbVar;chr3:63103673-63107733 dbVar;3:63104370-63107212 1000g;chr3:63128000-63139500 dbVar;3:63134848-63135305 1000g;chr3:63134856-63135309 dbVar;chr3:63134857-63135309 dbVar;3:63134857-63135309 gnomAD-SV_v2.1_DEL_3_33028;chr3:63164118-63164190 dbVar;chr3:63182335-63190512 dbVar;chr3:63184629-63185275 dbVar;chr3:63256602-63256696 dbVar;chr3:63321371-63322219 dbVar;chr3:63347273-63347343 dbVar;chr3:63382056-63382224 dbVar...	chr3:62938181-62985344 dbVar;chr3:62959345-62994669 dbVar;chr3:62959750-62999530 dbVar;chr3:62986062-62987807 dbVar;chr3:62992485-62993266 dbVar;chr3:63059041-63059108 dbVar;chr3:63081900-63082834 dbVar;chr3:63104369-63107212 dbVar;chr3:63119026-63120115 dbVar;chr3:63134847-63135305 dbVar;3:63134848-63135305 esv3596388;3:63134857-63135309 DDD:10454;3:63134857-63135309 esv2677248;3:63134858-63135309 IMH;chr3:63166947-63171818 dbVar;chr3:63184317-63184367 dbVar;chr3:63244236-63244406 dbVar;chr3:63299578-63299744 dbVar;chr3:63343372-63344883 dbVar;chr3:63353029-63353568 dbVar...	0.355	0.430	3:62939271-62939427	MER5A1	3:65268746-65268796;3:65268797-65269299	LTR16B;L1MB2												68.54	0.730304227093642	1.22944963357105	1.15014257139245	0.85336181383742	2.61388539526619							607640			yes		0	9.9544e-01	9.8784e-01	1.0	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (23 genes, +0.00);5F (+0.00)	5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.2	LINC00698				NR_027104	1	63088363	63110738	22375	0	0	NA	7	txStart-txEnd	UTR			63088363	63110738																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																				285401	HGNC:27720											full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.2	SYNPR				NM_001130003	2	63263983	63602600	338617	858	100	no	6	txStart-txEnd	5'UTR-3'UTR			63263983	63602600																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																										27.35				-0.433167561551584	-0.551647400212283					132204	HGNC:16507						4	4.1913e-03	1.7171e-01			full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.2	SYNPR-AS1				NR_046677	1	63409271	63535727	126456	0	0	NA	5	txStart-txEnd	UTR			63409271	63535727																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																																full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.2	SNTN				NM_001348756	2	63638350	63650888	12538	534	100	no	5	txStart-txEnd	5'UTR-3'UTR			63638350	63650888																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																										66.14	0.0947592166796515	-0.338299474644844	-0.173049359454575	-0.0258588646723899	-1.1196806141136					132203	HGNC:33706						9	1.0257e-04	2.7379e-03			full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	CDHR18P				NR_171774	1	63727499	63799313	71814	0	0	NA	9	txStart-txEnd	UTR			63727499	63799313																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																				100130345	HGNC:53742											full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	C3orf49				NM_001355236	2	63804974	63834312	29338	879	100	no	7	txStart-txEnd	5'UTR-3'UTR			63804974	63834312																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																										68.54										132200	HGNC:25190						7	4.0628e-08				full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	THOC7				NM_025075	4	63819545	63849481	29936	615	100	no	8	txStart-txEnd	5'UTR-3'UTR			63819545	63849481																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																										7.39	0.226822637024357	-2.4455441384945	-1.79937886551949	-0.696357556154856	1.21996216564798					80145	HGNC:29874						4	6.0818e-03	9.7832e-01			full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	THOC7-AS1				NR_104326	1	63846320	63847495	1175	0	0	NA	2	txStart-txEnd	UTR			63846320	63847495																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																																full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	ATXN7				NM_001177387	1	63884074	63989138	105064	2838	100	no	13	txStart-txEnd	5'UTR-3'UTR			63884074	63989138						Spinocerebellar ataxia 7, 164500 (3) AD		morbid:ATXN7	3:63953470-63989138																										IMH	3:1200531-154949082;3:38627146-149162150	0.3422																										17.72	0.730304227093642	0.636006512326363	0.862222958307612	0.85336181383742	0.386394557252369	autosomal dominant cerebellar ataxia type II;spinocerebellar ataxia type 7	AD	Moderate;Strong;Supportive	20301317[PMID];9288099	6314	HGNC:10560	607640	Spinocerebellar ataxia 7, 164500 (3) AD	AD	yes		1	9.5950e-01	9.2856e-01			full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	SCAANT1				NR_148359	2	63897187	63898059	872	0	0	NA	1	txStart-txEnd	UTR			63897187	63898059																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																				100861563	HGNC:43718											full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	PSMD6-AS2				NR_038286	1	63989697	63997919	8222	0	0	NA	3	txStart-txEnd	UTR			63989697	63997919																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																				100507062	HGNC:44125											full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	PSMD6				NM_001271779	2	63996226	64009170	12944	1329	100	no	9	txStart-txEnd	5'UTR-3'UTR			63996226	64009170																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																										8.63	0.167507008532066	0.979835184836382	0.835574002005388	-0.764855351937167	1.81088903222596					9861	HGNC:9564						0	9.9518e-01	9.6209e-01			full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	PSMD6-AS1				NR_189168	1	63997639	64001938	4299	0	0	NA	2	txStart-txEnd	UTR			63997639	64001938																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																																full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	PRICKLE2-AS1				NR_045697	1	64053639	64088807	35168	0	0	NA	3	txStart-txEnd	UTR			64053639	64088807																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																				100652759	HGNC:40916											full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	LINC00994				NR_033978	1	64064036	64073039	9003	0	0	NA	4	txStart-txEnd	UTR			64064036	64073039																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																				100287879	HGNC:48949											full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	PRICKLE2				NM_001370528	1	64077911	64253849	175938	2535	100	no	8	txStart-txEnd	5'UTR-3'UTR			64077911	64253849																								2	Progressive_myoclonic_epilepsy_type_5;See_cases										IMH	3:1200531-154949082;3:38627146-149162150	0.3422																										19.72	0.557303960601498	1.22944963357105	1.15014257139245	0.337534415605819	2.61388539526619	complex neurodevelopmental disorder;neurodevelopmental disorder	AD;AR	Limited		166336	HGNC:20340						1	9.9544e-01	9.8784e-01			full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	PRICKLE2-AS2				NR_046701	1	64089145	64092034	2889	0	0	NA	4	txStart-txEnd	UTR			64089145	64092034																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																																full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	PRICKLE2-AS3				NR_046702	1	64173219	64187237	14018	0	0	NA	4	txStart-txEnd	UTR			64173219	64187237																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																																full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	PRICKLE2-DT				NR_183712	1	64430932	64441746	10814	0	0	NA	4	txStart-txEnd	UTR			64430932	64441746																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																				101929316	HGNC:52829											full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	ADAMTS9				NM_182920	2	64501329	64673676	172347	5808	100	no	40	txStart-txEnd	5'UTR-3'UTR			64501329	64673676																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																										31.58	-1.39811826175974	-0.477054147176997	-0.711187689176027	-0.797615479905467	0.510431064472241	ciliopathy;nephronophthisis 1	AR	Limited;Supportive	30609407[PMID]	56999	HGNC:13202						1	1.0004e-06	4.2266e-07			full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	ADAMTS9-AS1				NR_110150	1	64547021	64575760	28739	0	0	NA	3	txStart-txEnd	UTR			64547021	64575760																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																				101929335	HGNC:40625											full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	ADAMTS9-AS2				NR_038264	1	64670545	64997143	326598	0	0	NA	6	txStart-txEnd	UTR			64670545	64997143																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																				100507098	HGNC:42435											full=5
3_62939218_65268743_DEL_1	3	62939218	65268743	-2329526	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	p14.1	LINC02040				NR_183715	1	65160613	65179178	18565	0	0	NA	5	txStart-txEnd	UTR			65160613	65179178																																			IMH	3:1200531-154949082;3:38627146-149162150	0.3422																																				102724763	HGNC:52880											full=5
3_97483034_97487074_DEL_1	3	97483034	97487074	-4041	DEL	BBS3/ARL6 promotor overlapped	Pathogenic	NA	full	q11.2	ARL6	EPHA6	CRYBG3	1																							dbVar:nssv16214088	3:97486953-97487074							dbVar:nssv15162889;dbVar:nssv15164144;dbVar:nssv15149891;nssv15151839;dbVar:nssv17976063;dbVar:nssv15148953;dbVar:nssv15148997	3:60175-197948027;3:61496-197838262;3:61893-197851986;3:72488758-99614758;3:93519465-145413168;3:93538468-103607593	0.00;0.00;0.00;0.01;0.01;0.04	Bardet-Biedl syndrome 3, 600151 (3) AR;Retinitis pigmentosa 55, 613575 (3) AR;Bardet-Biedl syndrome 1, modifier of, 209900 (3) Digenic recessive,AR		dbVar:nssv15147282;dbVar:nssv15146259;dbVar:nssv18842017;dbVar:nssv16254235;dbVar:nssv17171854;morbid:ARL6;dbVar:nssv18326626;dbVar:nssv17971170	3:93538468-116605903;3:93605516-122935530;3:93698392-124492857;3:95563097-102371126;3:97194197-97510809;3:97483602-97520073;3:97483823-97499002;3:97486953-97516893	0.02;0.01;0.01;0.06;1.28;9.52;21.42;0.41	5	ARL6-related_disorder;Bardet-Biedl_syndrome_1;Bardet-Biedl_syndrome_3;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_55				dbVar	chr3:97481287-97495551	0.01				IMH	3:1200531-154949082;3:38627146-149162150;3:75497389-125619977	0.3422								chr3:97481287-97495551 dbVar	0.455	0.335																10.16	0.309918017790144	-0.416168538751037	-0.151628993663861	-0.139439307213778	-0.254839803839483							608845			yes	yes	5	1.0130e-02	4.2709e-03	1.0	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (1 gene, +0.00);5F (+0.00)	5
3_97483034_97487074_DEL_1	3	97483034	97487074	-4041	DEL	BBS3/ARL6 promotor overlapped	Pathogenic	NA	split	q11.2	ARL6				NM_032146	5	97483364	97520086	3710	123	21	no	9	txStart-intron3	5'UTR-CDS	0	5'	97483364	97487074								dbVar:nssv16214088	3:97486953-97487074															5	ARL6-related_disorder;Bardet-Biedl_syndrome_1;Bardet-Biedl_syndrome_3;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_55				dbVar	chr3:97481287-97495551	0.01				IMH	3:1200531-154949082;3:38627146-149162150;3:75497389-125619977	0.3422																								30	0	10.16	0.309918017790144	-0.416168538751037	-0.151628993663861	-0.139439307213778	-0.254839803839483	Bardet-Biedl syndrome;Bardet-Biedl syndrome 3;retinitis pigmentosa;retinitis pigmentosa 55	AD;AR	Strong;Supportive	15258860;15314642;19858128;19956407;20142850;20301537[PMID];20301590[PMID];20333246;21282186;22085962;22334370;250666;26355662;26489029;27124789;27486776;28130426;28502102;31736247	84100	HGNC:13210	608845	Bardet-Biedl syndrome 3, 600151 (3) AR;Retinitis pigmentosa 55, 613575 (3) AR;(Bardet-Biedl syndrome 1, modifier of), 209900 (3) Digenic recessive,AR	AR;Digenic recessive,AR	yes	yes	5	1.0130e-02	4.2709e-03			full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	full	q14.3	LOC102724637;MIR3660;LINC01339;CETN3;LOC731157;MBLAC2;POLR3G;LYSMD3;ADGRV1;LUCAT1;ARRDC3;ARRDC3-AS1	MEF2C-AS1	LOC105379082	12																AGO2 (morbid/RE=mTL_miRNA);B4GALNT1 (morbid/RE=mTL_miRNA);CEP57 (morbid/RE=mTL_miRNA);EPHA2 (morbid/RE=mTL_miRNA);GFPT1 (morbid/RE=mTL_miRNA);GPSM2 (morbid/RE=mTL_miRNA);KDM6A (HI=3/morbid/RE=mTL_miRNA);KMT2A (HI=3/morbid/RE=mTL_miRNA);MEF2C (HI=3/morbid/RE=ABC_enhancer+GH_enhancer+GH_promoter);MSX2 (morbid/RE=mTL_miRNA);NODAL (morbid/RE=mTL_miRNA);NR2F1 (HI=3/morbid/RE=ABC_enhancer);PIGS (morbid/RE=mTL_miRNA);PLEKHM1 (morbid/RE=mTL_miRNA);PPP1R15B (morbid/RE=mTL_miRNA);PRKACB (morbid/RE=mTL_miRNA);SELENOI (morbid/RE=mTL_miRNA)			dbVar:nssv17172150;dbVar:nssv17172151;dbVar:nssv17974002;dbVar:nssv17974003;dbVar:nssv17976802	5:89920928-89923613;5:89938434-89948400;5:89938454-89949769;5:90136804-90261231;5:90144435-90159694	?Febrile seizures, familial, 4, 604352 (3) AD;Usher syndrome, type 2C, 605472 (3) Digenic dominant,AR;Usher syndrome, type 2C, GPR98;PDZD7 digenic, 605472 (3) Digenic dominant,AR;Usher_syndrome_type_2C		CLN:2419348;CLN:3786833;dbVar:nssv15120153;dbVar:nssv15132320;dbVar:nssv15222969;dbVar:nssv15771046;dbVar:nssv15772847;nssv15776039;dbVar:nssv15774334;dbVar:nssv16211859;dbVar:nssv17171561;dbVar:nssv17955830;dbVar:nssv17955831;dbVar:nssv17970856;dbVar:nssv17971694;dbVar:nssv17972093;dbVar:nssv17972414;dbVar:nssv17974150;dbVar:nssv17975051;dbVar:nssv17976597;dbVar:nssv18787826;dbVar:nssv18787827;dbVar:nssv18787828;dbVar:nssv18787829;dbVar:nssv18787830;dbVar:nssv18787831;dbVar:nssv18787832;dbVar:nssv18787833;dbVar:nssv18787834;dbVar:nssv18792626;dbVar:nssv8639335;dbVar:nssv8639887;morbid:ADGRV1	5:89414155-89415062;5:89414156-89415061;5:89523964-90412409;5:89854614-90460254;5:89854714-90459717;5:89910547-90079868;5:89910633-90002231;5:89915000-89968362;5:89918395-90059306;5:89930912-90079894;5:89940238-89999954;5:89940504-89986878;5:89940571-89940765;5:89953703-89954115;5:89953723-89954095;5:89969852-89975466;5:89988605-90077246;5:89989688-90000325;5:89990520-90136394;5:89992735-90125023;5:89999463-89999632;5:90015866-90016040;5:90046349-90049666;5:90112103-90219415;5:90119223-90151738;5:90150020-90159573;5:90151539-90151738;5:90221275-90357290;5:90261233-90678909;5:90261287-90261361;5:90368245-90398177;5:90368250-90459732			CLN:1393621;CLN:1447486;CLN:3819107;dbVar:nssv17971430;dbVar:nssv17974885	5:89949103-89949102;5:89949103-89949236;5:89990260-89990259;5:89990260-89990371;5:90024639-90024756			dbVar:nssv15164761;dbVar:nssv15164765;dbVar:nssv15151111;nssv15151221;dbVar:nssv16206767;dbVar:nssv15120567;dbVar:nssv15132159;dbVar:nssv15142272;dbVar:nssv15151420;dbVar:nssv15135062;dbVar:nssv16207624;dbVar:nssv15776426	5:13649-180905029;5:25329-180693344;5:113578-180719789;5:72790062-97478870;5:73459012-110145153;5:86420656-92718726;5:86621338-89204392;5:87399002-92675748;5:87493550-92528869;5:87792845-109221844;5:89949119-129317455	1.67;1.68;1.68;12.26;8.25;48.08;16.65;57.39;60.14;14.13;4.71			dbVar:nssv15151179;dbVar:nssv17970035;dbVar:nssv15138006;dbVar:nssv15127576;dbVar:nssv15120741;dbVar:nssv15122759;dbVar:nssv15143209;nssv17976344;dbVar:nssv15133640;dbVar:nssv15140345;dbVar:nssv15132311;dbVar:nssv18841850;dbVar:nssv15167313;dbVar:nssv15121450;dbVar:nssv15142367;dbVar:nssv15132971;dbVar:nssv15133836;dbVar:nssv15121948;dbVar:nssv15132637;dbVar:nssv15121951;dbVar:nssv15138054;dbVar:nssv15120743;dbVar:nssv15139660;dbVar:nssv8639414;dbVar:nssv15138098;dbVar:nssv15152898	5:17628742-176575720;5:82185952-90110454;5:83899399-110770779;5:85045626-89302638;5:86039541-91633081;5:86062777-91444662;5:86400001-154000000;5:86487716-89253266;5:86530416-88893604;5:86672701-100860147;5:87485354-93120303;5:87512315-95096562;5:87664107-91698938;5:87764486-90147447;5:88016215-88783092;5:88062498-89028098;5:88232588-93437723;5:88348148-88783092;5:88377170-104022949;5:89670424-127412115;5:90682370-97701584;5:90707526-130655256;5:91064111-93896378;5:91327087-93283043;5:91504102-104858348	1.91;16.86;11.27;12.41;51.11;49.62;4.48;17.32;5.05;21.34;53.74;39.93;72.48;57.62;1.14;26.28;58.17;2.01;19.35;5.65;15.96;2.74;26.07;24.30;2.23	435	ADGRV1-related_disorder;Autosomal_recessive_sensorineural_hearing_loss;Ear_malformation;Febrile_seizures,_familial,_4;Hearing_impairment;Hearing_loss,_autosomal_recessive;Rare_genetic_deafness;Retinal_dystrophy;Usher_syndrome;Usher_syndrome_type_2;Usher_syndrome_type_2A;Usher_syndrome_type_2C										IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483			5:89788663-89788952 IMH;5:90866987-90867072 gnomAD-SV_v2.1_DUP_5_15730	5:89264627-89264683 gnomAD-SV_v2.1_DUP_5_15710;5:89860422-89860742 1000g			chr5:88806361-88806411 dbVar;chr5:88831687-88837255 dbVar;chr5:89003565-89004043 dbVar;chr5:89003715-89004039 dbVar;5:89003716-89004039 esv3605750;5:89003721-89004043 esv2657768;chr5:89029798-89029893 dbVar;chr5:89045213-89045498 dbVar;chr5:89047323-89047872 dbVar;chr5:89067203-89083487 dbVar;chr5:89101197-89101273 dbVar;chr5:89113277-89114892 dbVar;chr5:89131325-89131385 dbVar;chr5:89209000-89239000 dbVar;chr5:89257321-89262348 dbVar;chr5:89359000-89373000 dbVar;chr5:89388378-89389723 dbVar;chr5:89436013-89437273 dbVar;chr5:89563059-89564683 dbVar;chr5:89578750-89579142 dbVar...	chr5:88803653-88817310 dbVar;chr5:88824732-88824785 dbVar;chr5:88832512-88834519 dbVar;5:89003565-89004043 gnomAD-SV_v2.1_DEL_5_59965;5:89003716-89004039 1000g;5:89003721-89004043 IMH;chr5:89018000-89031000 dbVar;chr5:89039679-89039840 dbVar;chr5:89047322-89047872 dbVar;chr5:89052853-89052953 dbVar;chr5:89084915-89086582 dbVar;chr5:89112611-89115172 dbVar;chr5:89124435-89124505 dbVar;chr5:89171348-89171401 dbVar;chr5:89234368-89234446 dbVar;chr5:89299879-89302011 dbVar;chr5:89388306-89389753 dbVar;chr5:89407162-89407215 dbVar;chr5:89471562-89472013 dbVar;chr5:89574182-89585732 dbVar...	0.335	0.275			5:91802185-91802338	L2a												38.97	0.855259196084686	1.02927857149332	1.26063232799998	1.13380694792028	1.83366808117122							602851			yes	yes	1	9.8715e-01	9.7875e-01	1.0	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (12 genes, +0.00);5F (+0.00)	5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	LOC102724637				NR_188242	1	89198108	89269817	71709	0	0	NA	6	txStart-txEnd	UTR			89198108	89269817																																			IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																																																full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	MIR3660				NR_037433	1	89312437	89312537	100	0	0	NA	1	txStart-txEnd	UTR			89312437	89312537																																			IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																																				100500825	HGNC:38985											full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	LINC01339				NR_120601	1	89454155	89585888	131733	0	0	NA	6	txStart-txEnd	UTR			89454155	89585888																																			IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																																				101929495	HGNC:50549											full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	CETN3				NM_001297765	2	89688073	89705573	17500	576	100	no	6	txStart-txEnd	5'UTR-3'UTR			89688073	89705573																																			IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																										5.94	0.855259196084686	1.02927857149332	1.26063232799998	-1.0886019180172	0.322004765294048					1070	HGNC:1868						7	1.0528e-04	1.1321e-02			full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	LOC731157				NR_105024	1	89705816	89706486	670	0	0	NA	2	txStart-txEnd	UTR			89705816	89706486																																			IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																																																full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	MBLAC2				NM_203406	2	89754025	89770588	16563	840	100	no	2	txStart-txEnd	5'UTR-3'UTR			89754025	89770588																																			IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																										38.68	-0.0315707309390069	0.414676882744812	0.420940108293089	1.13380694792028	0.9911283716698					153364	HGNC:33711						7	4.5418e-05	2.8010e-04			full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	POLR3G				NM_001370354	1	89769745	89810374	40629	672	100	no	8	txStart-txEnd	5'UTR-3'UTR			89769745	89810374																																			IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																										38.97	0.478729015674934	0.798950378312061	0.929744998199481	0.494543657071353	-0.512733755306802					10622	HGNC:30075						8	1.7611e-10	6.4276e-05			full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	LYSMD3				NM_198273	2	89811442	89825401	13959	921	100	no	3	txStart-txEnd	5'UTR-3'UTR			89811442	89825401																																			IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																										28.58				0.0616099264393714	-0.398837217747125					116068	HGNC:26969						3	3.0382e-01	7.7182e-01			full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	ADGRV1				NM_032119	4	89854613	90460254	605641	18921	100	no	90	txStart-txEnd	5'UTR-3'UTR			89854613	90460254				dbVar:nssv17172150;dbVar:nssv17172151;dbVar:nssv17974002;dbVar:nssv17974003;dbVar:nssv17976802	5:89920928-89923613;5:89938434-89948400;5:89938454-89949769;5:90136804-90261231;5:90144435-90159694	?Febrile seizures, familial, 4, 604352 (3) AD;Usher syndrome, type 2C, 605472 (3) Digenic dominant,AR;Usher syndrome, type 2C, GPR98;PDZD7 digenic, 605472 (3) Digenic dominant,AR		CLN:3786833;dbVar:nssv15120153;dbVar:nssv15222969;dbVar:nssv15771046;dbVar:nssv15772847;nssv15776039;dbVar:nssv15774334;dbVar:nssv17171561;dbVar:nssv17955830;dbVar:nssv17955831;dbVar:nssv17970856;dbVar:nssv17971694;dbVar:nssv17972093;dbVar:nssv17972414;dbVar:nssv17974150;dbVar:nssv17975051;dbVar:nssv17976597;dbVar:nssv18787826;dbVar:nssv18787827;dbVar:nssv18787828;dbVar:nssv18787829;dbVar:nssv18787830;dbVar:nssv18787831;dbVar:nssv18787832;dbVar:nssv18787833;dbVar:nssv18787834;dbVar:nssv8639335;dbVar:nssv8639887;morbid:ADGRV1	5:89854614-90460254;5:89854714-90459717;5:89910547-90079868;5:89910633-90002231;5:89915000-89968362;5:89918395-90059306;5:89930912-90079894;5:89940238-89999954;5:89940504-89986878;5:89940571-89940765;5:89953703-89954115;5:89953723-89954095;5:89969852-89975466;5:89988605-90077246;5:89989688-90000325;5:89990520-90136394;5:89992735-90125023;5:89999463-89999632;5:90015866-90016040;5:90046349-90049666;5:90112103-90219415;5:90119223-90151738;5:90150020-90159573;5:90151539-90151738;5:90221275-90357290;5:90261287-90261361;5:90368245-90398177;5:90368250-90459732			CLN:1393621;CLN:1447486;CLN:3819107;dbVar:nssv17971430;dbVar:nssv17974885	5:89949103-89949102;5:89949103-89949236;5:89990260-89990259;5:89990260-89990371;5:90024639-90024756											435	ADGRV1-related_disorder;Autosomal_recessive_sensorineural_hearing_loss;Ear_malformation;Febrile_seizures,_familial,_4;Hearing_impairment;Hearing_loss,_autosomal_recessive;Rare_genetic_deafness;Retinal_dystrophy;Usher_syndrome;Usher_syndrome_type_2;Usher_syndrome_type_2A;Usher_syndrome_type_2C										IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																								30	0	25.58						Usher syndrome type 2;Usher syndrome type 2C;febrile seizures, familial, 4;nonsyndromic genetic hearing loss	AD;AR	Definitive;Disputed Evidence;Limited;Strong;Supportive	14740321;16775142;19357116;19357117;20301515[PMID];22135276;22147658;23441107;25572244;280396	84059	HGNC:17416	602851	?Febrile seizures, familial, 4, 604352 (3) AD;Usher syndrome, type 2C, 605472 (3) Digenic dominant,AR;Usher syndrome, type 2C, GPR98/PDZD7 digenic, 605472 (3) Digenic dominant,AR	AD;Digenic dominant,AR	yes	yes						full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	LUCAT1				NR_103548	1	90598802	90610219	11417	0	0	NA	5	txStart-txEnd	UTR			90598802	90610219																																			IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																																				100505994	HGNC:48498											full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	ARRDC3				NM_020801	4	90664447	90679134	14687	1245	100	no	8	txStart-txEnd	5'UTR-3'UTR			90664447	90679134																																			IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																										10.63	0.745040589608255	1.00834122048279	1.19108832249232	0.196967347879621	1.83366808117122					57561	HGNC:29263						1	9.8715e-01	9.7875e-01			full=5
5_88774329_91802402_DEL_1	5	88774329	91802402	-3028074	DEL	TAD MEF2C	Pathogenic	NA	split	q14.3	ARRDC3-AS1				NR_027435	1	90676163	90716532	40369	0	0	NA	3	txStart-txEnd	UTR			90676163	90716532																																			IMH	5:24758285-101693420;5:28691217-97582419;5:84488955-162334467	0.5483																																				100129716	HGNC:44145											full=5
6_29854871_29896710_DEL_1	6	29854871	29896710	-41840	DEL		Benign	NA	full	p22.1	HLA-H;HCG4B	HCP5B	HLA-A	2																GABBR1 (morbid/RE=EA_enhancer);ZFP57 (morbid/RE=EA_enhancer+GH_enhancer+GH_promoter_enhancer)							morbid:HLA-H	6:29855350-29858856							dbVar:nssv15166690;dbVar:nssv15166692;dbVar:nssv15161578;dbVar:nssv15161859;nssv15161868;dbVar:nssv15168255;dbVar:nssv15148873;dbVar:nssv15606075	6:60108-171054786;6:108667-170980171;6:156975-46757028;6:156976-170919482;6:165633-170919470;6:3224545-30624967;6:29455466-81447367	0.02;0.02;0.09;0.02;0.02;0.15;0.08			dbVar:nssv17955655	6:28005013-31683185	1.14			DDD:20149;IMH	6:29698616-29950994;6:29722846-29947201;6:29723410-29948590;6:29733227-29961287;6:29760864-29916953;6:29762617-29919277;6:29767291-29923611;6:29767394-29923982;6:29771866-29927541;6:29840747-29917149	0.1073	1000g;DDD:20139;DDD:20142;DDD:20149;DDD:20154;IMH;dbVar;dgv1087e199;dgv7e195;esv2761013;esv2763941;esv3608493	6:29745199-29961072;6:29805446-29928380;6:29836637-29921127;6:29837073-29937311;6:29840747-29917149;6:29842746-29916111;6:29851122-29905999;chr6:29851172-29904515;6:29851173-29904515;6:29851173-29904515;6:29851444-29899493;6:29853315-29914786	0.4519				IMH	6:26743912-58149585;6:26745294-58149309	0.3871			6:29722846-29947201 IMH;6:29733227-29961287 IMH;6:29762617-29919277 IMH;6:29767394-29923982 IMH;6:29771866-29927541 IMH;6:29777143-29871794 IMH;6:29840747-29917149 DDD:20149	6:29698616-29950994 IMH;6:29723410-29948590 IMH;6:29760864-29916953 IMH;6:29767291-29923611 IMH;6:29769716-29865367 IMH;6:29773145-29867669 IMH;6:29778441-29873573 IMH			6:29805446-29928380 DDD:20142;6:29836637-29921127 esv2763941;6:29840747-29917149 DDD:20149;6:29851122-29905999 IMH;6:29851173-29904515 1000g;6:29851444-29865718 esv2422126;6:29853315-29914786 DDD:20154;6:29861152-29916006 IMH;6:29864510-29936194 dgv1734e212;6:29890896-29906192 dgv1089e199;6:29892561-29905834 HI40:ISCA-46607	6:29745199-29961072 DDD:20139;6:29829109-29874629 dgv1726e212;6:29837073-29937311 esv2761013;6:29842746-29916111 dgv1087e199;chr6:29851172-29904515 dbVar;6:29851173-29904515 esv3608493;6:29851444-29899493 dgv7e195;6:29859518-29886164 dgv740n27;6:29864510-29889669 dgv1732e212;6:29873934-29890069 nsv515032;6:29891102-29906000 DDD:20157	0.375	0.510							6:29842025-29863148																								yes					1.0	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (2 genes, +0.00);5F (+0.00)	5
6_29854871_29896710_DEL_1	6	29854871	29896710	-41840	DEL		Benign	NA	split	p22.1	HLA-H				NR_001434	4	29855349	29858856	3507	0	0	NA	8	txStart-txEnd	UTR			29855349	29858856								morbid:HLA-H	6:29855350-29858856																	DDD:20149;IMH	6:29698616-29950994;6:29722846-29947201;6:29723410-29948590;6:29733227-29961287;6:29760864-29916953;6:29762617-29919277;6:29767291-29923611;6:29767394-29923982;6:29769716-29865367;6:29771866-29927541;6:29773145-29867669;6:29777143-29871794;6:29778441-29873573;6:29840747-29917149	0.1073	1000g;DDD:20139;DDD:20142;DDD:20149;DDD:20154;IMH;dbVar;dgv1087e199;dgv1726e212;dgv7e195;esv2422126;esv2761013;esv2763941;esv3608493	6:29745199-29961072;6:29805446-29928380;6:29829109-29874629;6:29836637-29921127;6:29837073-29937311;6:29840747-29917149;6:29842746-29916111;6:29851122-29905999;chr6:29851172-29904515;6:29851173-29904515;6:29851173-29904515;6:29851444-29865718;6:29851444-29899493;6:29853315-29914786	0.4519				IMH	6:26743912-58149585;6:26745294-58149309	0.3871																																				3136	HGNC:4965				yes							full=5
6_29854871_29896710_DEL_1	6	29854871	29896710	-41840	DEL		Benign	NA	split	p22.1	HCG4B				NR_001317	3	29892368	29894992	2624	0	0	NA	1	txStart-txEnd	UTR			29892368	29894992																										DDD:20149;IMH	6:29698616-29950994;6:29722846-29947201;6:29723410-29948590;6:29733227-29961287;6:29760864-29916953;6:29762617-29919277;6:29767291-29923611;6:29767394-29923982;6:29771866-29927541;6:29840747-29917149	0.1073	1000g;DDD:20139;DDD:20142;DDD:20149;DDD:20154;DDD:20157;IMH;dbVar;dgv1087e199;dgv1089e199;dgv1734e212;dgv7e195;esv2761013;esv2763941;esv3608493	6:29745199-29961072;6:29805446-29928380;6:29836637-29921127;6:29837073-29937311;6:29840747-29917149;6:29842746-29916111;6:29851122-29905999;chr6:29851172-29904515;6:29851173-29904515;6:29851173-29904515;6:29851444-29899493;6:29853315-29914786;6:29861152-29916006;6:29864510-29936194;6:29890896-29906192;6:29891102-29906000	0.4519				IMH	6:26743912-58149585;6:26745294-58149309	0.3871																																				80868	HGNC:22919											full=5
8_56986130_57169684_DEL_1	8	56986130	57169684	-183555	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	full	q12.1	RPS20;SNORD54;CERNA3;MOS;PLAG1;CHCHD7	SNORA1B	SDR16C5	6																LYN (morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer)					Adenomas, salivary gland pleomorphic, somatic, 181030 (3);Silver-Russell syndrome 4, 618907 (3) AD;Oocyte;zygote;embryo maturation arrest 20, 620383 (3) AR		morbid:MOS;morbid:PLAG1	8:57025501-57026541;8:57073468-57123832							dbVar:nssv15169207;dbVar:nssv15128680;dbVar:nssv15161801;nssv15777239;nssv17976962;dbVar:nssv15161417;nssv15161657;dbVar:nssv15161846;dbVar:nssv15169210;dbVar:nssv15161105;dbVar:nssv15161269;dbVar:nssv15161748;dbVar:nssv15161087;dbVar:nssv15161426;dbVar:nssv15161357;dbVar:nssv15777249;dbVar:nssv15147495;dbVar:nssv15774700;dbVar:nssv15161758;dbVar:nssv15161797;dbVar:nssv15139743;dbVar:nssv15135704	8:10214-146293414;8:13939-146304022;8:158049-146295771;8:158050-146295771;8:158992-146280828;8:164985-146293414;8:176453-146294098;8:191531-146274835;8:191531-146280020;8:191606-146280167;8:12491000-146295771;8:21149034-146295771;8:31936552-146295771;8:36437622-60531557;8:39555658-64049089;8:46942957-70216022;8:46942963-140297737;8:53436132-65195953;8:56228415-65864987	0.13;0.13;0.13;0.13;0.13;0.13;0.13;0.13;0.13;0.13;0.14;0.15;0.16;0.76;0.75;0.79;0.20;1.56;1.90			dbVar:nssv15167540;dbVar:nssv15148967;dbVar:nssv15138741;dbVar:nssv15125104;dbVar:nssv15137960;dbVar:nssv15137390;dbVar:nssv15121489;dbVar:nssv15124419	8:49822484-58822602;8:50384338-58738029;8:54237950-62775577;8:54407102-58403572;8:55677511-57697858;8:55733918-62058861;8:56335974-59749312;8:56405321-57358911	2.04;2.20;2.15;4.59;9.09;2.90;5.38;19.25																		8:57048633-57098412 1000g			chr8:56988070-56988448 dbVar;8:56988698-56989817 1000g;8:56988746-56989825 DDD:27790;chr8:56988762-56997935 dbVar;chr8:57005850-57007074 dbVar;chr8:57059737-57063078 dbVar;chr8:57160128-57168353 dbVar;chr8:57161314-57168512 dbVar	chr8:56988017-57000275 dbVar;chr8:56988697-56989817 dbVar;chr8:56988709-56997905 dbVar;chr8:56988754-56989776 dbVar;8:56988763-56997935 1000g;chr8:57047231-57047490 dbVar;chr8:57154268-57155609 dbVar;chr8:57161113-57168156 dbVar	0.410	0.330			8:57169736-57169990	AluSz6												78.38	0.98432298330431	0.46663829854876	0.586548999968454	2.2343517715388	2.48184869967673							190060;603026			yes		0	9.9532e-01	8.2992e-01	1.0	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (6 genes, +0.00);5F (+0.00)	5
8_56986130_57169684_DEL_1	8	56986130	57169684	-183555	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	q12.1	RPS20				NM_001146227	3	56979812	56987065	936	177	41	no	6	txStart-intron3	5'UTR-CDS	124	5'	56986129	56987065																																																													0	0	29.1	0.98432298330431	-0.0464637247715686	0.36681079114905	-0.0133102053832282	2.09183372030708	Diamond-Blackfan anemia;Lynch syndrome;familial colorectal cancer;familial colorectal cancer type X;hereditary nonpolyposis colon cancer	AD	Limited;Moderate;Supportive	24941021[PMID];32790018[PMID]	6224	HGNC:10405						5	2.0686e-02	6.8632e-01			full=5
8_56986130_57169684_DEL_1	8	56986130	57169684	-183555	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	q12.1	SNORD54				NR_002437	1	56986397	56986460	63	0	0	NA	1	txStart-txEnd	UTR			56986397	56986460																																																																									26795	HGNC:10204											full=5
8_56986130_57169684_DEL_1	8	56986130	57169684	-183555	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	q12.1	CERNA3				NR_149110	1	56987150	56987833	683	0	0	NA	2	txStart-txEnd	UTR			56987150	56987833																																																																									105375847	HGNC:53469											full=5
8_56986130_57169684_DEL_1	8	56986130	57169684	-183555	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	q12.1	MOS				NM_005372	1	57025500	57026541	1041	1041	100	no	1	txStart-txEnd	5'UTR-3'UTR			57025500	57026541						Oocyte;zygote;embryo maturation arrest 20, 620383 (3) AR		morbid:MOS	8:57025501-57026541																																																						78.38	0.159444434408663	0.46663829854876	0.524682444320288	2.2343517715388	2.48184869967673	oocyte/zygote/embryo maturation arrest 20		Limited	34779126;34997960;35670744	4342	HGNC:7199	190060	Oocyte/zygote/embryo maturation arrest 20, 620383 (3) AR	AR	yes		3	5.8928e-01	1.4931e-01			full=5
8_56986130_57169684_DEL_1	8	56986130	57169684	-183555	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	q12.1	PLAG1				NM_001114634	2	57073467	57123832	50365	1503	100	no	4	txStart-txEnd	5'UTR-3'UTR			57073467	57123832						Adenomas, salivary gland pleomorphic, somatic, 181030 (3);Silver-Russell syndrome 4, 618907 (3) AD		morbid:PLAG1	8:57073468-57123832																																																						15.18	0.393657994766781	-2.53125239294469	-2.47162789907313	-0.349819812502603	1.96019845356841	silver-russell syndrome 4	AD	Moderate;Strong	15606491;28796236;32546215	5324	HGNC:9045	603026	Adenomas, salivary gland pleomorphic, somatic, 181030 (3);Silver-Russell syndrome 4, 618907 (3) AD	AD	yes		0	9.9532e-01	8.2992e-01			full=5
8_56986130_57169684_DEL_1	8	56986130	57169684	-183555	DEL	VOUS in 2017, reclassified in 2020	Pathogenic	NA	split	q12.1	CHCHD7				NM_001011668	3	57124347	57131368	7021	333	100	no	5	txStart-txEnd	5'UTR-3'UTR			57124347	57131368																																																															47.62	0.447428062348521	0.400234098889925	0.586548999968454	-0.725400991144389	-0.857804306808559					79145	HGNC:28314						6	3.4885e-02	3.8798e-01			full=5
X_53250654_53856257_DUP_1	X	53250654	53856257	605604	DUP	HUWE1	Pathogenic	NA	full	p11.22	KDM5C;IQSEC2;SMC1A;MIR6857;RIBC1;HSD17B10;HUWE1;MIR98;MIRLET7F2	MIR6894	PHF8	9																ACACA (morbid/RE=mTL_miRNA);ACADM (morbid/RE=mTL_miRNA);ACTA1 (morbid/RE=mTL_miRNA);ACVR2B (morbid/RE=mTL_miRNA);ADA (morbid/RE=mTL_miRNA);ADGRE2 (morbid/RE=mTL_miRNA);ADGRG1 (morbid/RE=mTL_miRNA);ADH5 (morbid/RE=mTL_miRNA);AGO1 (morbid/RE=mTL_miRNA);AGPS (morbid/RE=mTL_miRNA);AHR (morbid/RE=mTL_miRNA);AK2 (morbid/RE=mTL_miRNA);ALAS2 (morbid/RE=ABC_enhancer);ALDH1A3 (morbid/RE=mTL_miRNA);ALDH7A1 (morbid/RE=mTL_miRNA);ALG3 (morbid/RE=mTL_miRNA);ALG8 (morbid/RE=mTL_miRNA);AMD1 (morbid/RE=mTL_miRNA);AMMECR1 (morbid/RE=mTL_miRNA);ANKRD11 (HI=3/morbid/RE=mTL_miRNA);ANTXR2 (morbid/RE=mTL_miRNA);AP1S1 (morbid/RE=mTL_miRNA);ARCN1 (HI=3/morbid/RE=mTL_miRNA);ARHGEF18 (morbid/RE=mTL_miRNA);ARID1A (HI=3/morbid/RE=mTL_miRNA);ARID1B (HI=3/morbid/RE=mTL_miRNA);ARL6IP1 (morbid/RE=mTL_miRNA);ASCC3 (morbid/RE=mTL_miRNA);ATL1 (morbid/RE=mTL_miRNA);ATP13A3 (morbid/RE=mTL_miRNA);ATP2A2 (morbid/RE=mTL_miRNA);ATP7B (morbid/RE=mTL_miRNA);ATR (morbid/RE=mTL_miRNA);ATXN2 (morbid/RE=mTL_miRNA);B4GAT1 (morbid/RE=mTL_miRNA);BACH1 (morbid/RE=mTL_miRNA);BCL11A (HI=3/morbid/RE=mTL_miRNA);BCL2 (morbid/RE=mTL_miRNA);BCOR (HI=3/morbid/RE=mTL_miRNA);BNC2 (morbid/RE=mTL_miRNA);C12orf4 (morbid/RE=mTL_miRNA);C3 (morbid/RE=mTL_miRNA);CACNA1C (morbid/RE=mTL_miRNA);CACNB2 (morbid/RE=mTL_miRNA);CALM1 (morbid/RE=mTL_miRNA);CANT1 (morbid/RE=mTL_miRNA);CAP1 (morbid/RE=mTL_miRNA);CAPN15 (morbid/RE=mTL_miRNA);CBL (morbid/RE=mTL_miRNA);CCND2 (morbid/RE=mTL_miRNA)...	Xp11.22 region (includes HUWE1)		TS3:ISCA-46299;dbVar:nssv15147941;dbVar:nssv15147942;dbVar:nssv15161312;nssv15161529;dbVar:nssv15161768	X:53276031-53298472;X:53283514-53325284;X:53363457-53793054;X:53559549-53622547;X:53559733-53790650	Cornelia de Lange syndrome 2, 300590 (3) XLD;Developmental and epileptic encephalopathy 85, with or without midline brain defects, 301044 (3) XLD;HSD10 mitochondrial disease, 300438 (3) XLD;Intellectual developmental disorder, XL 1, 309530 (3) XLD;Intellectual developmental disorder, XL syndromic, Turner type, 309590 (3) XL;Intellectual_disability,_X-linked_1		CLN:1065452;HI3:IQSEC2;HI3:SMC1A;dbVar:nssv15769470;dbVar:nssv16212358;dbVar:nssv16215156;dbVar:nssv17171530;dbVar:nssv17171900;dbVar:nssv17172048;dbVar:nssv17172462;dbVar:nssv17970926;dbVar:nssv17971164;dbVar:nssv18788536;dbVar:nssv18791522;morbid:HSD17B10;morbid:HUWE1;morbid:IQSEC2;morbid:SMC1A	X:53253923-53254071;X:53262059-53350548;X:53263402-53280376;X:53264077-53264258;X:53264078-53264257;X:53270947-53271111;X:53279442-53280376;X:53295510-53310766;X:53348888-53349736;X:53401070-53449677;X:53401071-53449677;X:53430479-53432101;X:53430479-53442138;X:53435974-53442138;X:53448826-53449569;X:53449432-53449549;X:53458209-53461317;X:53559057-53713664															277	Abnormal_heart_valve_morphology;Atypical_Rett_syndrome;Congenital_muscular_hypertrophy-cerebral_syndrome;Cornelia_de_Lange_syndrome_1;De_Lange_syndrome;Developmental_and_epileptic_encephalopathy,_85,_with_or_without_midline_brain_defects;Epileptic_encephalopathy;Global_developmental_delay;HSD10_mitochondrial_disease;HUWE1-related_disorder;Hirsutism;Hypertonia;Inborn_genetic_diseases;Intellectual_disability;Intellectual_disability,_X-linked_1;Intellectual_disability,_X-linked_syndromic,_Turner_type;Microcephaly;Neurodevelopmental_delay;Paraplegia-intellectual_disability-hyperkeratosis_syndrome;Progressive_sensorineural_hearing_impairment;SMC1A-related_cohesinopathy;SMC1A-related_disorder;See_cases;Seizure;Severe_intellectual_deficiency;Spastic_paraplegia;Syndromic_X-linked_intellectual_disability_Claes-Jensen_type;Undetermined_early-onset_epileptic_encephalopathy										IMH	X:46769178-84009828	0.1280							chrX:53318184-53318333 dbVar;chrX:53319071-53320350 dbVar;chrX:53414007-53419436 dbVar;chrX:53475340-53498420 dbVar;X:53478094-53491686 1000g;X:53478191-53491588 IMH;X:53478192-53491585 gnomAD-SV_v2.1_DEL_X_186301;chrX:53481193-53482847 dbVar;chrX:53485000-53555000 dbVar;X:53496417-53499888 1000g;chrX:53504537-53504627 dbVar;chrX:53513549-53520809 dbVar;chrX:53520678-53520750 dbVar;chrX:53561861-53562148 dbVar;chrX:53684764-53684885 dbVar;X:53772345-53778301 1000g;X:53772358-53778316 IMH;chrX:53776500-53781600 dbVar;chrX:53781934-53808203 dbVar;X:53792164-53792218 1000g...	chrX:53256067-53256435 dbVar;chrX:53318309-53320696 dbVar;X:53319072-53320350 1000g;chrX:53437409-53437467 dbVar;chrX:53478093-53491686 dbVar;X:53478160-53491616 DDD:57601;chrX:53478192-53491585 dbVar;chrX:53478817-53479165 dbVar;X:53481194-53482847 1000g;chrX:53496416-53499888 dbVar;chrX:53496418-53499890 dbVar;chrX:53513441-53520776 dbVar;chrX:53513576-53513640 dbVar;chrX:53557344-53558918 dbVar;chrX:53680158-53680957 dbVar;chrX:53772344-53778301 dbVar;X:53772358-53778316 DDD:57606;chrX:53774645-53775785 dbVar;X:53776864-53777371 nsv515204;chrX:53787125-53795624 dbVar...	0.420	0.295	X:53250479-53250649	MIRc	X:53855851-53856180;X:53856303-53856465	L1MA7;L1MA7										3		75.6				0.807946261414963	9.03470791370173							314690;300522;300040;300256;300697			yes		0	1.0000e+00	1.0000e+00	1.0	1A (cf Gene_count, RE_gene, +0.00);2A (cf P_gain_source, +1.00);2H-2 (HSD17B10/HUWE1/IQSEC2/SMC1A, +0.00);2J (KDM5C, +0.00);3A (9 genes, +0.00);5F (+0.00)	5
X_53250654_53856257_DUP_1	X	53250654	53856257	605604	DUP	HUWE1	Pathogenic	NA	split	p11.22	KDM5C				NM_001353979	2	53205458	53254389	3736	150	3	no	26	txStart-intron1	5'UTR-CDS	555	3'	53250653	53254389								dbVar:nssv16215156	X:53253923-53254071															6	Inborn_genetic_diseases;Spastic_paraplegia;Syndromic_X-linked_intellectual_disability_Claes-Jensen_type										IMH	X:46769178-84009828	0.1280																								3	0	11.71				-1.20041549946446	5.44441583895939	X-linked syndromic intellectual disability;syndromic X-linked intellectual disability Claes-Jensen type	XL	Definitive;Strong;Supportive	15586325;15586325[PMID];18697827;21575681;22326837;25666439;32279304	8242	HGNC:11114	314690	Intellectual developmental disorder, XL syndromic, Claes-Jensen type, 300534 (3) XLR	XLR	yes		0	1.0000e+00	9.9784e-01			full=5
X_53250654_53856257_DUP_1	X	53250654	53856257	605604	DUP	HUWE1	Pathogenic	NA	split	p11.22	IQSEC2				NM_001111125	3	53262057	53350548	88491	4467	100	no	15	txStart-txEnd	5'UTR-3'UTR			53262057	53350548				dbVar:nssv15147941;dbVar:nssv15147942	X:53276031-53298472;X:53283514-53325284	Intellectual developmental disorder, XL 1, 309530 (3) XLD;Intellectual_disability,_X-linked_1		CLN:1065452;HI3:IQSEC2;dbVar:nssv17171900;dbVar:nssv17172048;dbVar:nssv17172462;dbVar:nssv17970926;dbVar:nssv18791522;morbid:IQSEC2	X:53262059-53350548;X:53263402-53280376;X:53264077-53264258;X:53264078-53264257;X:53270947-53271111;X:53279442-53280376;X:53295510-53310766;X:53348888-53349736															136	Inborn_genetic_diseases;Intellectual_disability;Intellectual_disability,_X-linked_1;Neurodevelopmental_delay;Paraplegia-intellectual_disability-hyperkeratosis_syndrome;See_cases;Severe_intellectual_deficiency;Undetermined_early-onset_epileptic_encephalopathy										IMH	X:46769178-84009828	0.1280																								3	0	26.16				-0.257046228208263	4.55717824142058	X-linked complex neurodevelopmental disorder;intellectual disability, X-linked 1;non-syndromic X-linked intellectual disability;severe intellectual disability-progressive postnatal microcephaly- midline stereotypic hand movements syndrome	XL	Definitive;Strong;Supportive	20473311[PMID];21686261;23674175[PMID];24306141;25167861;26544041;26793055;27665735;300522;30206421	23096	HGNC:29059	300522	Intellectual developmental disorder, XL 1, 309530 (3) XLD	XLD	yes		0	9.9998e-01	9.7539e-01			full=5
X_53250654_53856257_DUP_1	X	53250654	53856257	605604	DUP	HUWE1	Pathogenic	NA	split	p11.22	SMC1A				NM_006306	4	53401069	53449603	48534	3702	100	no	25	txStart-txEnd	5'UTR-3'UTR			53401069	53449603								dbVar:nssv15769470;dbVar:nssv16212358;dbVar:nssv17171530;dbVar:nssv17971164;dbVar:nssv18788536	X:53430479-53432101;X:53430479-53442138;X:53435974-53442138;X:53448826-53449569;X:53449432-53449549															118	Abnormal_heart_valve_morphology;Atypical_Rett_syndrome;Congenital_muscular_hypertrophy-cerebral_syndrome;Cornelia_de_Lange_syndrome_1;De_Lange_syndrome;Developmental_and_epileptic_encephalopathy,_85,_with_or_without_midline_brain_defects;Epileptic_encephalopathy;Global_developmental_delay;Hirsutism;Hypertonia;Inborn_genetic_diseases;Intellectual_disability;Microcephaly;Progressive_sensorineural_hearing_impairment;SMC1A-related_cohesinopathy;SMC1A-related_disorder;See_cases;Seizure										IMH	X:46769178-84009828	0.1280																								3	0	14.23				-0.112682658348456	6.67845368195785	Cornelia de Lange syndrome;Cornelia de Lange syndrome 2;X-linked complex neurodevelopmental disorder;atypical Rett syndrome;developmental and epileptic encephalopathy, 85, with or without midline brain defects	AD;XL	Definitive;Strong;Supportive	20301283[PMID];26358754;26386245;27334371;28166369;28548707;31334757;32222533[PMID]	8243	HGNC:11111	300040	Cornelia de Lange syndrome 2, 300590 (3) XLD;Developmental and epileptic encephalopathy 85, with or without midline brain defects, 301044 (3) XLD	XLD	yes		0	1.0000e+00	9.9999e-01			full=5
X_53250654_53856257_DUP_1	X	53250654	53856257	605604	DUP	HUWE1	Pathogenic	NA	split	p11.22	MIR6857				NR_106916	1	53432604	53432697	93	0	0	NA	1	txStart-txEnd	UTR			53432604	53432697																																			IMH	X:46769178-84009828	0.1280																																				102465516	HGNC:50263											full=5
X_53250654_53856257_DUP_1	X	53250654	53856257	605604	DUP	HUWE1	Pathogenic	NA	split	p11.22	RIBC1				NM_001031745	5	53449821	53458063	8242	1140	100	no	8	txStart-txEnd	5'UTR-3'UTR			53449821	53458063																																			IMH	X:46769178-84009828	0.1280																										75.6				0.80408198011521	0.293719819544616					158787	HGNC:26537						1	9.8300e-01	9.6626e-01			full=5
X_53250654_53856257_DUP_1	X	53250654	53856257	605604	DUP	HUWE1	Pathogenic	NA	split	p11.22	HSD17B10				NM_004493	3	53458208	53461317	3109	786	100	no	6	txStart-txEnd	5'UTR-3'UTR			53458208	53461317						HSD10 mitochondrial disease, 300438 (3) XLD		morbid:HSD17B10	X:53458209-53461317															4	HSD10_mitochondrial_disease										IMH	X:46769178-84009828	0.1280																								0	0	21.63				0.807946261414963	2.17074250392365	HSD10 disease, infantile type;HSD10 disease, neonatal type;HSD10 mitochondrial disease;syndromic X-linked intellectual disability type 10	XL	Definitive;Strong;Supportive	22127393;22127393[PMID]	3028	HGNC:4800	300256	HSD10 mitochondrial disease, 300438 (3) XLD	XLD	yes		1	9.3604e-01	8.8687e-01			full=5
X_53250654_53856257_DUP_1	X	53250654	53856257	605604	DUP	HUWE1	Pathogenic	NA	split	p11.22	HUWE1				NM_031407	7	53559056	53713664	154608	13125	100	no	84	txStart-txEnd	5'UTR-3'UTR			53559056	53713664				dbVar:nssv15161768	X:53559549-53622547	Intellectual developmental disorder, XL syndromic, Turner type, 309590 (3) XL		morbid:HUWE1	X:53559057-53713664															13	Global_developmental_delay;HUWE1-related_disorder;Inborn_genetic_diseases;Intellectual_disability;Intellectual_disability,_X-linked_syndromic,_Turner_type;Neurodevelopmental_delay										IMH	X:46769178-84009828	0.1280																								0	0	10.58				-1.65771922174252	9.03470791370173	intellectual disability, X-linked syndromic, Turner type;non-syndromic X-linked intellectual disability;syndromic intellectual disability	AD;XL	Definitive;Strong;Supportive	18252223;19377476;1968668;20231446;22840365;24303071;25644381;25985138;27418510;27615324;29180823;29180823[PMID]	10075	HGNC:30892	300697	Intellectual developmental disorder, XL syndromic, Turner type, 309590 (3) XL	XL	yes		0	1.0000e+00	1.0000e+00			full=5
X_53250654_53856257_DUP_1	X	53250654	53856257	605604	DUP	HUWE1	Pathogenic	NA	split	p11.22	MIR98				NR_029513	1	53583183	53583302	119	0	0	NA	1	txStart-txEnd	UTR			53583183	53583302																																			IMH	X:46769178-84009828	0.1280																																				407054	HGNC:31649											full=5
X_53250654_53856257_DUP_1	X	53250654	53856257	605604	DUP	HUWE1	Pathogenic	NA	split	p11.22	MIRLET7F2				NR_029484	1	53584152	53584235	83	0	0	NA	1	txStart-txEnd	UTR			53584152	53584235																																			IMH	X:46769178-84009828	0.1280																																				406889	HGNC:31484											full=5
11_66287089_66288847_DEL_1	11	66287089	66288847	-1759	DEL	BBS1 internal frameshift	Pathogenic	NA	full	q13.2	BBS1;ZDHHC24	DPP3	ACTN3	2																BANF1 (morbid/RE=EA_enhancer);CATSPER1 (morbid/RE=EA_enhancer);CTSF (morbid/RE=EA_enhancer);FIBP (morbid/RE=EA_enhancer);KLC2 (morbid/RE=EA_enhancer);PACS1 (morbid/RE=EA_enhancer);PC (morbid/RE=EA_enhancer);SF3B2 (morbid/RE=EA_enhancer);SPTBN2 (morbid/RE=EA_enhancer);TMEM151A (morbid/RE=EA_enhancer)															dbVar:nssv15171978;dbVar:nssv15158476;dbVar:nssv15150306;nssv15150623;dbVar:nssv17976763;dbVar:nssv15150659;dbVar:nssv15605814;dbVar:nssv15146474;dbVar:nssv17973682	11:70865-134938470;11:198511-134934063;11:230617-134938470;11:32799482-134938470;11:64501920-67129258;11:65138977-67574402;11:65960974-67658241;11:66281868-66288857	0.00;0.00;0.00;0.00;0.07;0.07;0.10;25.16	Bardet-Biedl syndrome 1, 209900 (3) Digenic recessive,AR		dbVar:nssv16867095;dbVar:nssv15148225;dbVar:nssv15129970;dbVar:nssv18792809;morbid:BBS1;dbVar:nssv16214536;dbVar:nssv17171795;dbVar:nssv16212285;dbVar:nssv17976607;dbVar:nssv17974991;dbVar:nssv17172605;dbVar:nssv16212781;dbVar:nssv18787680;dbVar:nssv15128612;dbVar:nssv17172606	11:11835570-118373112;11:65508903-67473140;11:66274841-66292574;11:66274871-66292647;11:66278106-66301069;11:66278112-66291373;11:66278112-66299528;11:66278122-66291682;11:66278712-66293593;11:66283002-66287229;11:66283155-66287229;11:66287079-66288857;11:66287079-66291105;11:66288384-66293649;11:66288722-66293683	0.00;0.09;9.92;9.89;7.66;13.26;8.21;12.97;11.82;3.33;3.46;98.88;43.68;8.81;2.54	14	BBS1-related_disorder;Bardet-Biedl_syndrome;Bardet-Biedl_syndrome_1;Retinal_dystrophy										IMH	11:1642920-71249653;11:49233128-89368291;11:49425032-89029881;11:49425381-89029675;11:49580506-88798755;11:49652145-88728247;11:50025478-108975588	0.4320									0.565	0.545																67.28	-0.648300458519823	0.663432885116562	0.155145712015149	0.635599914039232	1.04727080312339							209901			yes		5	4.2080e-04	6.1403e-03	0.9	1A (cf Gene_count, RE_gene, +0.00);2E-1 (BBS1, +0.90);3A (2 genes, +0.00);5F (+0.00)	4
11_66287089_66288847_DEL_1	11	66287089	66288847	-1759	DEL	BBS1 internal frameshift	Pathogenic	NA	split	q13.2	BBS1				NM_024649	5	66278105	66301069	1759	238	13	yes	17	exon8-intron9	CDS	0	5'	66287088	66288847																								14	BBS1-related_disorder;Bardet-Biedl_syndrome;Bardet-Biedl_syndrome_1;Retinal_dystrophy										IMH	11:1642920-71249653;11:49233128-89368291;11:49425032-89029881;11:49425381-89029675;11:49580506-88798755;11:49652145-88728247;11:50025478-108975588	0.4320																										40.7	-0.648300458519823	0.663432885116562	0.155145712015149	0.0819191978639822	0.0377121632347663	Bardet-Biedl syndrome;Bardet-Biedl syndrome 1;ciliopathy	AR	Definitive;Strong;Supportive	10577921;10577922;12118255;18032602;20301537[PMID];20498079	582	HGNC:966	209901	Bardet-Biedl syndrome 1, 209900 (3) Digenic recessive,AR	Digenic recessive,AR	yes		5	3.4063e-12	1.7787e-07			full=4
11_66287089_66288847_DEL_1	11	66287089	66288847	-1759	DEL	BBS1 internal frameshift	Pathogenic	NA	split	q13.2	ZDHHC24				NM_001348571	2	66288095	66313519	752	0	0	NA	5	exon5-txEnd	3'UTR	90	3'	66288095	66288847																								7	BBS1-related_disorder;Bardet-Biedl_syndrome;Bardet-Biedl_syndrome_1;Retinal_dystrophy										IMH	11:1642920-71249653;11:49233128-89368291;11:49425032-89029881;11:49425381-89029675;11:49580506-88798755;11:49652145-88728247;11:50025478-108975588	0.4320																										67.28	-1.23986898178133	0.616417349113344	-0.188374414893838	0.635599914039232	1.04727080312339					254359	HGNC:27387						7	4.2080e-04	6.1403e-03			full=4
7_33397468_33397607_DEL_1	7	33397468	33397607	-140	DEL	BBS9 inframe	Pathogenic	NA	full	p14.3	BBS9	RP9	FLJ20712	1																															dbVar:nssv15777247;dbVar:nssv15168013;dbVar:nssv15161666;nssv15161679;dbVar:nssv15168014;dbVar:nssv15161745;dbVar:nssv15161726;dbVar:nssv17970196;dbVar:nssv15161869;dbVar:nssv15161632;dbVar:nssv17970205;dbVar:nssv15133397;dbVar:nssv15154527;dbVar:nssv15146465	7:10366-159119707;7:10705-159122532;7:43362-159119707;7:44936-159126310;7:54186-37129317;7:54186-41915483;7:10745751-35305167;7:11048841-52863626;7:11562625-36395416;7:27507833-39072473;7:30460550-34600277;7:30463887-43470805;7:33367925-61831899	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00	Bardet-Biedl syndrome 9, 615986 (3) AR		dbVar:nssv15161318;dbVar:nssv17976840;dbVar:nssv18329275;dbVar:nssv15138559;dbVar:nssv15147510;dbVar:nssv15148432;morbid:BBS9;dbVar:nssv17971381;dbVar:nssv18790316;dbVar:nssv18790317	7:54186-159075079;7:25451741-33864069;7:27133787-34466477;7:30977986-33440608;7:32718004-41084581;7:32911004-44576005;7:33169176-33675379;7:33296829-33427776;7:33376034-33427776;7:33388661-33397627	0.00;0.00;0.00;0.01;0.00;0.00;0.03;0.11;0.27;1.56	2	Bardet-Biedl_syndrome;Bardet-Biedl_syndrome_9										IMH	7:23891013-65526751;7:33013222-55782515	0.3810									0.325	0.370																17.13	-2.43637392050626	-2.53125239294469	-2.47162789907313	-0.989035894351638	-1.15018109964609							607968			yes		4	4.2117e-17	6.3752e-10	0.9	1A (cf Gene_count, RE_gene, +0.00);2E-1 (BBS9, +0.90);3A (1 gene, +0.00);5F (+0.00)	4
7_33397468_33397607_DEL_1	7	33397468	33397607	-140	DEL	BBS9 inframe	Pathogenic	NA	split	p14.3	BBS9				NM_001348036	1	33168896	33645680	140	140	5	yes	23	exon16-intron16	CDS	0	5'	33397467	33397607																								2	Bardet-Biedl_syndrome;Bardet-Biedl_syndrome_9										IMH	7:23891013-65526751;7:33013222-55782515	0.3810																										17.13	-2.43637392050626	-2.53125239294469	-2.47162789907313	-0.989035894351638	-1.15018109964609	Bardet-Biedl syndrome;Bardet-Biedl syndrome 9;ciliopathy	AR	Definitive;Strong;Supportive	16380913;20177705;20301537[PMID];21209035;250490;251248;268436;282550	27241	HGNC:30000	607968	Bardet-Biedl syndrome 9, 615986 (3) AR	AR	yes		4	4.2117e-17	6.3752e-10			full=4
12_63935482_64130626_DUP_1	12	63935482	64130626	195145	DUP	DPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)	Pathogenic	NA	full	q14.2	DPY19L2	AVPR1A	RXYLT1	1																RXYLT1 (morbid/RE=GH_enhancer+GH_promoter);TBK1 (morbid/RE=EA_enhancer)					Spermatogenic failure 9, 613958 (3) AR		dbVar:nssv15119764;dbVar:nssv16213932;morbid:DPY19L2	12:63952693-64062273;12:63952694-64062354;12:63989747-63989817							dbVar:nssv15161620;dbVar:nssv15161414;nssv15161422;dbVar:nssv15171852;dbVar:nssv15161798;dbVar:nssv15171855	12:2-133851895;12:173788-133777902;12:191620-133777645;12:282466-133773393;12:621221-133779118	0.15;0.15;0.15;0.15;0.15			dbVar:nssv15136921	12:61300933-66961857	3.45	1	Spermatogenic_failure_9										IMH	12:11501488-96031049;12:40933234-113477160	0.1070			12:63939159-64117235 1000g;12:63940549-64135811 DDD:38888;12:64069043-64136500 dgv280e214;12:63939159-64117235 1000g;12:63940549-64135811 DDD:38888;12:64069043-64136500 dgv280e214	12:63936386-64131550 gnomAD-SV_v2.1_DUP_12_34997;12:63939159-64117235 esv3629757;12:64020291-64020367 DDD:38896;12:63936386-64131550 gnomAD-SV_v2.1_DUP_12_34997;12:63939159-64117235 esv3629757;12:64020291-64020367 DDD:38896			chr12:63936000-63986000 dbVar;chr12:63946269-64141505 dbVar;chr12:63946732-63946956 dbVar;12:63946733-63946956 IMH;chr12:63959839-63959910 dbVar;12:64020291-64020367 DDD:38896;chr12:64069257-64069348 dbVar;chr12:64076528-64076585 dbVar;chr12:64116494-64116881 dbVar;chr12:63923277-64119251 dbVar;chr12:63939158-64117235 dbVar;12:63946730-63946956 esv2662353;12:63946732-63946956 gnomAD-SV_v2.1_DEL_12_129265;chr12:63950172-63950241 dbVar;chr12:64015848-64018740 dbVar;chr12:64065000-64130000 dbVar;chr12:64069869-64069961 dbVar;chr12:64103835-64106468 dbVar;chr12:64122000-64127000 dbVar	chr12:63923277-64119251 dbVar;chr12:63939158-64117235 dbVar;12:63946730-63946956 esv2662353;12:63946732-63946956 gnomAD-SV_v2.1_DEL_12_129265;chr12:63950172-63950241 dbVar;chr12:64015848-64018740 dbVar;chr12:64065000-64130000 dbVar;chr12:64069869-64069961 dbVar;chr12:64103835-64106468 dbVar;chr12:64122000-64127000 dbVar;chr12:63936000-63986000 dbVar;chr12:63946269-64141505 dbVar;chr12:63946732-63946956 dbVar;12:63946733-63946956 IMH;chr12:63959839-63959910 dbVar;12:64020291-64020367 DDD:38896;chr12:64069257-64069348 dbVar;chr12:64076528-64076585 dbVar;chr12:64116494-64116881 dbVar	0.530	0.430	12:63935369-63935656	AluSq2	12:64130409-64130696	AluSq2			12:63923419-63951619	12:64119249-64146247								81.13				1.02618176351368	1.66555804568279							613893			yes		4	1.0936e-13	7.0294e-05	0.0	1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2G (cf po_B_gain_someG_source, +0.00);2H-2 (DPY19L2, +0.00);3A (1 gene, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)	3
12_63935482_64130626_DUP_1	12	63935482	64130626	195145	DUP	DPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)	Pathogenic	NA	split	q14.2	DPY19L2				NM_173812	5	63952692	64062273	109581	2277	100	no	22	txStart-txEnd	5'UTR-3'UTR			63952692	64062273						Spermatogenic failure 9, 613958 (3) AR		dbVar:nssv16213932;morbid:DPY19L2	12:63952693-64062273;12:63989747-63989817															1	Spermatogenic_failure_9	1000g;DDD:38888;esv3629757;gnomAD-SV_v2.1_DUP_12_34997	12:63936386-64131550;12:63939159-64117235;12:63939159-64117235;12:63940549-64135811	0.0257	dbVar	chr12:63923277-64119251;chr12:63939158-64117235;chr12:63946269-64141505	0.01				IMH	12:11501488-96031049;12:40933234-113477160	0.1070																										81.13				1.02618176351368	1.66555804568279	male infertility due to globozoospermia;spermatogenic failure 9	AR	Strong;Supportive	17008355;21397063;21397063[PMID]_22571172[PMID];21397064;22627659;22653751;25755131;25780569	283417	HGNC:19414	613893	Spermatogenic failure 9, 613958 (3) AR	AR	yes		4	1.0936e-13	7.0294e-05			full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	full	p11.2-p11.1	LOC102723753;HERC2P4;TP53TG3D;LOC390705;LOC107987382;TP53TG3;SLC6A10P;TP53TG3C;LOC105369266;TP53TG3B;LOC107987386;ENPP7P13;MIR9901;CCNYL3;UBE2MP1;LOC112268173;LOC105371200;LINC01566	ZNF267	FRG2DP	18																															dbVar:nssv15158812;dbVar:nssv15148703;dbVar:nssv15150639;nssv15151292;dbVar:nssv15158813;dbVar:nssv15158224;dbVar:nssv16216874;dbVar:nssv15126545;dbVar:nssv15133058;dbVar:nssv15126469;dbVar:nssv15150356	16:61452-90294632;16:69194-90274381;16:85882-90155062;16:88166-90163275;16:88166-90274695;16:5805002-34230001;16:24381954-33923059;16:30703234-35147508;16:31986099-90294753;16:34197493-64509054	3.04;3.05;3.05;3.05;3.05;8.00;20.63;61.82;4.66;1.67			dbVar:nssv15141243	16:28826163-34375007	43.61												IMH	16:24121264-80276578;16:29238285-88227116	0.4996			16:31985111-31985155 DDD:47053;16:32020000-32026200 gnomAD-SV_v2.1_DUP_16_42021;16:32020000-32096000 gnomAD-SV_v2.1_DUP_16_42022;16:32123333-33664028 DDD:47062;16:32193431-32193767 DDD:47069;16:32232000-32237100 gnomAD-SV_v2.1_DUP_16_42027;16:32328772-32370968 1000g;16:32328772-32370968 dgv504e214;16:32366482-32410672 1000g;16:32366482-32410672 dgv505e214;16:32418984-32469917 1000g;16:32454389-32457877 IMH;16:32486529-32486871 DDD:47082;16:32511180-33912324 dgv821e212;16:32611030-32642738 1000g;16:32611030-32642738 dgv507e214;16:32740800-32750700 gnomAD-SV_v2.1_DUP_16_42037;16:32831660-32863935 1000g;16:32831660-32863935 dgv508e214;16:32903492-32927819 1000g...	16:31749454-34012168 dgv50e203;16:31989000-32033000 gnomAD-SV_v2.1_DUP_16_42016;16:32020000-32096000 TS40:ISCA-46491;16:32055083-33851279 DDD:47058;16:32129166-32904510 DDD:47063;16:32202950-32209100 gnomAD-SV_v2.1_DUP_16_42026;16:32257510-32714406 esv2421440;16:32328772-32370968 1000g;16:32345385-33344188 IMH;16:32366482-32410672 1000g;16:32418984-32469917 1000g;16:32418984-32469917 dgv506e214;16:32473116-32486576 DDD:47080;16:32489448-32622550 dgv4e224;16:32589803-32684945 DDD:47091;16:32611030-32642738 1000g;16:32684868-32688916 DDD:47098;16:32831660-32863935 1000g;16:32831660-32863935 1000g;16:32900256-32908555 nsv514802...			chr16:31933999-31991400 dbVar;chr16:31986799-32041500 dbVar;chr16:31998194-32020170 dbVar;chr16:32036000-32041500 dbVar;16:32055083-33851279 DDD:47058;16:32129166-32904510 DDD:47063;chr16:32289883-32289979 dbVar;16:32298051-32812316 DDD:47074;chr16:32328771-32370968 dbVar;chr16:32366481-32410672 dbVar;chr16:32393247-32393542 dbVar;chr16:32473466-32473664 dbVar;16:32485788-32648832 DDD:47081;16:32489448-32622550 dgv4e224;chr16:32494596-32496820 dbVar;chr16:32511665-32511727 dbVar;16:32524651-32525229 IMH;16:32532282-32533735 IMH;16:32562331-32601372 IMH;chr16:32586298-32586783 dbVar...	16:31749454-34012168 dgv50e203;chr16:31971409-31971474 dbVar;chr16:31986800-31999150 dbVar;chr16:32010600-32020000 dbVar;16:32052946-32496748 DDD:47057;16:32123333-33664028 DDD:47062;16:32257510-32714406 esv2421440;chr16:32294372-32294452 dbVar;chr16:32312790-32313754 dbVar;16:32328772-32370968 1000g;chr16:32373626-32373758 dbVar;chr16:32418983-32469917 dbVar;chr16:32485126-32485204 dbVar;16:32486808-32486871 DDD:47084;chr16:32491490-32496732 dbVar;16:32511180-32878155 dgv819e212;16:32518848-32519371 IMH;16:32525918-32525974 IMH;16:32541493-32648861 DDD:47087;16:32562341-32600296 IMH...	0.225	0.335	16:31948879-31955047;16:31955090-31955836	L1PA3;L1M4c														94.39				1.56757328357025	2.11426077975333												9	7.5995e-03	6.4106e-01	0.0	1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2G (cf po_B_gain_someG_source, +0.00);3A (18 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)	3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	LOC102723753				NR_135178	1	32163432	32199434	36002	0	0	NA	25	txStart-txEnd	UTR			32163432	32199434																										DDD:47058;DDD:47062;DDD:47063;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510	0.1314	DDD:47057;DDD:47058;DDD:47062;DDD:47063;dgv50e203	16:31749454-34012168;16:32052946-32496748;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510	0.1692				IMH	16:24121264-80276578;16:29238285-88227116	0.4996																																																full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	HERC2P4				NR_109773	1	32181363	32199434	18071	0	0	NA	14	txStart-txEnd	UTR			32181363	32199434																										DDD:47058;DDD:47062;DDD:47063;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510	0.1314	DDD:47057;DDD:47058;DDD:47062;DDD:47063;dgv50e203	16:31749454-34012168;16:32052946-32496748;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510	0.1692				IMH	16:24121264-80276578;16:29238285-88227116	0.4996																																				100289574	HGNC:4872											full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	TP53TG3D				NM_001243722	3	32264606	32267249	2643	375	100	no	2	txStart-txEnd	5'UTR-3'UTR			32264606	32267249																										DDD:47058;DDD:47062;DDD:47063;dgv50e203;esv2421440	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406	0.1314	DDD:47057;DDD:47058;DDD:47062;DDD:47063;dgv50e203;esv2421440	16:31749454-34012168;16:32052946-32496748;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406	0.2300				IMH	16:24121264-80276578;16:29238285-88227116	0.4996																										92.49				1.56757328357025	2.11426077975333					729264	HGNC:44657						9	7.5995e-03	6.4106e-01			full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	LOC390705				NR_033866	1	32300867	32301302	435	0	0	NA	1	txStart-txEnd	UTR			32300867	32301302																										DDD:47058;DDD:47062;DDD:47063;dgv50e203;esv2421440	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406	0.1314	DDD:47057;DDD:47058;DDD:47062;DDD:47063;DDD:47074;dgv50e203;esv2421440	16:31749454-34012168;16:32052946-32496748;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32298051-32812316	0.2300				IMH	16:24121264-80276578;16:29238285-88227116	0.4996																																																full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	LOC107987382				NR_171659	1	32611681	32626892	15211	0	0	NA	8	txStart-txEnd	UTR			32611681	32626892																										1000g;DDD:47058;DDD:47062;DDD:47063;DDD:47091;IMH;dgv507e214;dgv50e203;dgv821e212;esv2421440	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32345385-33344188;16:32511180-33912324;16:32589803-32684945;16:32611030-32642738;16:32611030-32642738;16:32611030-32642738	0.8086	DDD:47058;DDD:47062;DDD:47063;DDD:47074;DDD:47081;DDD:47087;DDD:47091;DDD:47092;dbVar;dgv50e203;dgv819e212;esv2421440	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32298051-32812316;16:32485788-32648832;16:32511180-32878155;16:32541493-32648861;16:32589803-32684945;16:32590685-32653097;chr16:32611029-32642738	0.2300				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																																																full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	TP53TG3				NM_016212	5	32684850	32687486	2636	375	100	no	2	txStart-txEnd	5'UTR-3'UTR			32684850	32687486																										DDD:47058;DDD:47062;DDD:47063;IMH;dgv50e203;dgv821e212;esv2421440	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32345385-33344188;16:32511180-33912324	0.3314	DDD:47058;DDD:47062;DDD:47063;DDD:47074;HI40:ISCA-46492;dbVar;dgv50e203;dgv819e212;esv2421440	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32298051-32812316;16:32511180-32878155;16:32656000-32802000;chr16:32656000-32802000	0.2300				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																										94.39										24150	HGNC:30759											full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	SLC6A10P				NR_003083	3	32888793	32896463	7670	0	0	NA	9	txStart-txEnd	UTR			32888793	32896463																										DDD:47058;DDD:47062;DDD:47063;IMH;dgv50e203;dgv821e212	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32345385-33344188;16:32511180-33912324	0.3314	DDD:47058;DDD:47062;DDD:47063;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510	0.1692				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																																				386757	HGNC:11043											full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	TP53TG3C				NM_001205259	3	33205546	33208179	2633	375	100	no	2	txStart-txEnd	5'UTR-3'UTR			33205546	33208179																										DDD:47058;DDD:47062;DDD:47113;IMH;dgv50e203;dgv821e212	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738	0.3314	DDD:47058;DDD:47062;DDD:47113;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738	0.0715				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																										91.96										653550	HGNC:42962											full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	LOC105369266				NR_158162	1	33215160	33232409	17249	0	0	NA	6	txStart-txEnd	UTR			33215160	33232409																										DDD:47058;DDD:47062;DDD:47113;IMH;dgv50e203;dgv821e212	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738	0.3314	DDD:47058;DDD:47062;DDD:47113;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738	0.0715				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																																																full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	TP53TG3B				NM_001099687	4	33262081	33264719	2638	375	100	no	2	txStart-txEnd	5'UTR-3'UTR			33262081	33264719																										DDD:47058;DDD:47062;DDD:47113;DDD:47114;IMH;dgv50e203;dgv821e212	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738;16:33230271-33739925	0.3314	DDD:47058;DDD:47062;DDD:47113;DDD:47114;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738;16:33230271-33739925	0.1243				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																										92.24										729355	HGNC:37202											full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	LOC107987386				NR_171660	1	33298270	33319296	21026	0	0	NA	5	txStart-txEnd	UTR			33298270	33319296																										DDD:47058;DDD:47062;DDD:47113;DDD:47114;DDD:47116;IMH;dgv50e203;dgv821e212	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738;16:33230271-33739925;16:33270420-33827235	0.5150	DDD:47058;DDD:47062;DDD:47113;DDD:47114;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738;16:33230271-33739925	0.1243				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																																																full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	ENPP7P13				NR_130771	1	33571843	33586742	14899	0	0	NA	3	txStart-txEnd	UTR			33571843	33586742																										DDD:47058;DDD:47062;DDD:47114;DDD:47116;DDD:47126;DDD:47131;DDD:47136;dgv50e203;dgv821e212;nsv514803	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32511180-33912324;16:33230271-33739925;16:33270420-33827235;16:33302092-33630727;16:33473790-33628580;16:33526621-33659628;16:33560604-33662009	0.5150	DDD:47058;DDD:47062;DDD:47114;DDD:47126;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33230271-33739925;16:33473790-33628580	0.1243				IMH	16:24121264-80276578;16:29238285-88227116	0.4996																																																full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	MIR9901				NR_162093	1	33966044	33966140	96	0	0	NA	1	txStart-txEnd	UTR			33966044	33966140																										dgv50e203	16:31749454-34012168	0.0700	dgv50e203	16:31749454-34012168	0.0500				IMH	16:24121264-80276578;16:29238285-88227116	0.4996																																				113218496	HGNC:53993											full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	CCNYL3				NR_158158	1	34264719	34294699	29980	0	0	NA	11	txStart-txEnd	UTR			34264719	34294699																										TS40:ISCA-37481;dgv51e203;nsv516385	16:34197352-35283226;16:34202089-35147508;16:34259806-34805859	0.0600	HI40:ISCA-37481;dbVar	chr16:34197000-34310700;chr16:34197000-34434000;16:34202089-35147508	0.01				IMH	16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460	0.4996																																				102724928	HGNC:33206											full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	UBE2MP1				NR_002837	1	34403801	34404762	961	0	0	NA	1	txStart-txEnd	UTR			34403801	34404762																										TS40:ISCA-37481;dgv51e203;nsv516385	16:34197352-35283226;16:34202089-35147508;16:34259806-34805859	0.0600	HI40:ISCA-37481;dbVar	chr16:34197000-34434000;16:34202089-35147508	0.01				IMH	16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460	0.4996																																				606551	HGNC:32195											full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	LOC112268173				NR_157261	1	34430129	34431919	1790	0	0	NA	1	txStart-txEnd	UTR			34430129	34431919																										TS40:ISCA-37481;dgv117e55;dgv51e203;nsv516385	16:34197352-35283226;16:34202089-35147508;16:34259806-34805859;16:34410570-34796531	0.0900	HI40:ISCA-37481;dbVar	chr16:34197000-34434000;16:34202089-35147508	0.01				IMH	16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460	0.4996																																																full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2	LOC105371200				NR_188627	1	34442319	34479081	36762	0	0	NA	4	txStart-txEnd	UTR			34442319	34479081																										TS40:ISCA-37481;dgv117e55;dgv2962n100;dgv51e203;nsv516385	16:34197352-35283226;16:34202089-35147508;16:34259806-34805859;16:34410570-34796531;16:34441796-34784591	0.0900	HI40:ISCA-37481	16:34202089-35147508					IMH	16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460	0.4996																																																full=3
16_31955077_34702366_DUP_1	16	31955077	34702366	2747290	DUP		Benign	NA	split	p11.2-p11.1	LINC01566				NR_027080	2	34597786	34626084	28298	0	0	NA	7	txStart-txEnd	UTR			34597786	34626084																										1000g;DDD:47173;DDD:47179;DDD:47183;TS40:ISCA-37481;dgv117e55;dgv2962n100;dgv51e203;dgv824e212;esv2421698;esv3638500;gnomAD-SV_v2.1_DUP_16_42078;gnomAD-SV_v2.1_DUP_16_42081;nsv514804;nsv516385	16:34197352-35283226;16:34202089-35147508;16:34259806-34805859;16:34410570-34796531;16:34441796-34784591;16:34445084-34774280;16:34456525-34736855;16:34457086-34712399;16:34457086-34712399;16:34465000-34757000;16:34470705-34757071;16:34471852-34731191;16:34476781-34747070;16:34567146-34656231;16:34572795-34661165	0.1875	HI40:ISCA-37481;dbVar	16:34202089-35147508;chr16:34457085-34712399	0.01				IMH	16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460	0.4996																																				283914	HGNC:27555											full=3
16_33371444_34285848_DUP_1	16	33371444	34285848	914405	DUP		Benign	NA	full	p11.2	ENPP7P13;MIR9901;CCNYL3	LOC107987386	UBE2MP1	3																															dbVar:nssv15158812;dbVar:nssv15148703;dbVar:nssv15150639;nssv15151292;dbVar:nssv15158813;dbVar:nssv15158224;dbVar:nssv16216874;dbVar:nssv15126545;dbVar:nssv15133058;dbVar:nssv15126469;dbVar:nssv15150356	16:61452-90294632;16:69194-90274381;16:85882-90155062;16:88166-90163275;16:88166-90274695;16:5805002-34230001;16:24381954-33923059;16:30703234-35147508;16:31986099-90294753;16:34197493-64509054	1.01;1.01;1.02;1.02;1.01;3.02;5.78;20.57;1.57;0.29			dbVar:nssv15141243	16:28826163-34375007	16.48												IMH	16:24121264-80276578;16:29238285-88227116	0.4996			16:32055083-33851279 DDD:47058;16:32511180-33912324 dgv821e212;16:33230271-33739925 DDD:47114;16:33302092-33630727 nsv514803;16:33406659-33406773 IMH;16:33446164-33480261 1000g;16:33464249-33499453 DDD:47125;16:33470756-33495606 1000g;16:33473790-33628580 DDD:47126;16:33484522-33543753 1000g;16:33524566-33570784 1000g;16:33524566-33570784 dgv513e214;16:33560604-33662009 DDD:47136;16:33588533-33626594 1000g;16:33588533-33626594 dgv514e214;16:33870630-33923125 esv3892830;16:33961733-33961778 DDD:47155;16:33983829-34200953 DDD:47158;16:34202089-35147508 TS40:ISCA-37481;	16:31749454-34012168 dgv50e203;16:32123333-33664028 DDD:47062;16:33204449-33378738 DDD:47113;16:33270420-33827235 DDD:47116;16:33376004-33548487 DDD:47124;16:33446164-33480261 1000g;16:33446164-33480261 dgv510e214;16:33470756-33495606 1000g;16:33470756-33495606 dgv511e214;16:33484522-33543753 1000g;16:33484522-33543753 dgv512e214;16:33524566-33570784 1000g;16:33526621-33659628 DDD:47131;16:33582387-33629628 DDD:47138;16:33588533-33626594 1000g;16:33783303-33785890 DDD:47148;16:33879457-33912806 esv3892831;16:33961808-33964212 DDD:47156;16:34197352-35283226 dgv51e203;16:34259806-34805859 nsv516385			16:32055083-33851279 DDD:47058;16:33204449-33378738 DDD:47113;chr16:33429584-33429643 dbVar;16:33433594-33433957 gnomAD-SV_v2.1_DEL_16_153879;chr16:33462282-33462339 dbVar;16:33464249-33499453 DDD:47125;chr16:33470755-33495606 dbVar;16:33473790-33628580 DDD:47126;16:33486471-33490892 DDD:47128;chr16:33524565-33570784 dbVar;16:33537417-33539750 esv2656732;chr16:33545163-33547147 dbVar;chr16:33559201-33559298 dbVar;chr16:33560642-33560933 dbVar;16:33582387-33629628 DDD:47138;16:33586836-33590310 1000g;chr16:33588532-33626594 dbVar;16:33589117-33599697 1000g;chr16:33597522-33597696 dbVar;16:33604896-33605259 gnomAD-SV_v2.1_DEL_16_153891...	16:31749454-34012168 dgv50e203;16:32123333-33664028 DDD:47062;16:33230271-33739925 DDD:47114;chr16:33433594-33433957 dbVar;chr16:33446163-33480261 dbVar;16:33462282-33462339 gnomAD-SV_v2.1_DEL_16_153880;chr16:33467950-33468051 dbVar;chr16:33472157-33472229 dbVar;chr16:33484521-33543753 dbVar;chr16:33509280-33509607 dbVar;chr16:33529598-33529692 dbVar;chr16:33543857-33545591 dbVar;chr16:33556576-33556850 dbVar;16:33559201-33559298 gnomAD-SV_v2.1_DEL_16_153886;chr16:33564729-33565655 dbVar;chr16:33586835-33590310 dbVar;16:33586836-33590310 esv3638472;chr16:33589116-33599697 dbVar;16:33589117-33599697 esv3638477;chr16:33604896-33605259 dbVar...	0.430	0.365	16:33371221-33371434	AluSz6					16:33241272-33372204;16:33325624-33372204;16:33330495-33372204;16:33330495-33372204;16:33342946-33372204;16:33353245-33373923;16:33355202-33372204;16:33363548-33517471		16:32923001-33427100	High Signal Region																										0.0	1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2G (cf po_B_gain_someG_source, +0.00);2L (CCNYL3, +0.00);3A (3 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)	3
16_33371444_34285848_DUP_1	16	33371444	34285848	914405	DUP		Benign	NA	split	p11.2	ENPP7P13				NR_130771	1	33571843	33586742	14899	0	0	NA	3	txStart-txEnd	UTR			33571843	33586742																										DDD:47058;DDD:47062;DDD:47114;DDD:47116;DDD:47126;DDD:47131;DDD:47136;dgv50e203;dgv821e212;nsv514803	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32511180-33912324;16:33230271-33739925;16:33270420-33827235;16:33302092-33630727;16:33473790-33628580;16:33526621-33659628;16:33560604-33662009	0.5150	DDD:47058;DDD:47062;DDD:47114;DDD:47126;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33230271-33739925;16:33473790-33628580	0.1243				IMH	16:24121264-80276578;16:29238285-88227116	0.4996																																																full=3
16_33371444_34285848_DUP_1	16	33371444	34285848	914405	DUP		Benign	NA	split	p11.2	MIR9901				NR_162093	1	33966044	33966140	96	0	0	NA	1	txStart-txEnd	UTR			33966044	33966140																										dgv50e203	16:31749454-34012168	0.0700	dgv50e203	16:31749454-34012168	0.0500				IMH	16:24121264-80276578;16:29238285-88227116	0.4996																																				113218496	HGNC:53993											full=3
16_33371444_34285848_DUP_1	16	33371444	34285848	914405	DUP		Benign	NA	split	p11.2	CCNYL3				NR_158158	1	34264719	34294699	21129	0	0	NA	11	txStart-intron9	UTR	82	5'	34264719	34285848																										TS40:ISCA-37481;dgv51e203;nsv516385	16:34197352-35283226;16:34202089-35147508;16:34259806-34805859	0.0600	HI40:ISCA-37481;dbVar	chr16:34197000-34310700;chr16:34197000-34434000;16:34202089-35147508	0.01				IMH	16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460	0.4996																																				102724928	HGNC:33206											full=3
5_723195_777000_DUP_1	5	723195	777000	53806	DUP		Benign	NA	full	p15.33	ZDHHC11B	TPPP	ZDHHC11	1																NDUFS6 (morbid/RE=ABC_enhancer);SDHA (morbid/RE=EA_enhancer);SLC9A3 (morbid/RE=GH_enhancer);TRIP13 (morbid/RE=ABC_enhancer+EA_enhancer)															dbVar:nssv15164761;dbVar:nssv15125831;dbVar:nssv15146713;dbVar:nssv15139036;dbVar:nssv15136993;dbVar:nssv15145871;dbVar:nssv15147378;dbVar:nssv15147960;dbVar:nssv15146962;dbVar:nssv15147414;dbVar:nssv15164765;dbVar:nssv15164764;dbVar:nssv15149091;dbVar:nssv15147291;dbVar:nssv15146993;dbVar:nssv15146992;dbVar:nssv15150844;dbVar:nssv17976838;dbVar:nssv15153658;dbVar:nssv15151111;nssv15151221	5:13649-180905029;5:22150-10308848;5:22150-15851485;5:22150-1659250;5:22150-2324057;5:22150-23607162;5:22150-28075213;5:22150-33418294;5:22150-34041255;5:22150-73708550;5:25329-180693344;5:25329-18698028;5:25329-19661628;5:50094-46115086;5:54955-35680947;5:54955-45649963;5:113577-20240392;5:113577-29310520;5:113577-35739404;5:113578-180719789	0.03;0.52;0.34;3.29;2.34;0.23;0.19;0.16;0.16;0.07;0.03;0.29;0.27;0.12;0.15;0.12;0.27;0.18;0.15;0.03	5p15 terminal (Cri du chat syndrome) region		dbVar:nssv18330851;dbVar:nssv18841914;dbVar:nssv17649947;dbVar:nssv15147173;dbVar:nssv15145875;dbVar:nssv15147440;dbVar:nssv15146459;dbVar:nssv15146622;dbVar:nssv15147702;dbVar:nssv15136268;dbVar:nssv15146696;dbVar:nssv15145969;dbVar:nssv15151220;dbVar:nssv15132269;dbVar:nssv15148862;dbVar:nssv15148231;dbVar:nssv15147402;dbVar:nssv15146458;dbVar:nssv15149597;dbVar:nssv15147956;dbVar:nssv15148968;dbVar:nssv15148844;dbVar:nssv15146717;dbVar:nssv15148985;dbVar:nssv15148016;dbVar:nssv15148112;dbVar:nssv15145972;dbVar:nssv16866488;dbVar:nssv15140376;dbVar:nssv15148058;dbVar:nssv15148554;dbVar:nssv15132604;dbVar:nssv15134412;dbVar:nssv15147416;dbVar:nssv15140515;dbVar:nssv15135741;dbVar:nssv15141721;dbVar:nssv15138139;dbVar:nssv15139127;dbVar:nssv15139876;dbVar:nssv15134733;dbVar:nssv15142657;dbVar:nssv15141520;dbVar:nssv15147171;dbVar:nssv15150118;dbVar:nssv15146522;dbVar:nssv15164763;dbVar:nssv15150859;dbVar:nssv15166282;dbVar:nssv15132966;dbVar:nssv15132967;HI3:ISCA-37390;dbVar:nssv15146165;nssv15146815;dbVar:nssv15148064;dbVar:nssv15132680;dbVar:nssv15223218;dbVar:nssv15134417;dbVar:nssv16216549;dbVar:nssv15149121;dbVar:nssv15150161;dbVar:nssv15137858;dbVar:nssv15150229;dbVar:nssv15149886;dbVar:nssv16208009;dbVar:nssv17976839;dbVar:nssv15148942;dbVar:nssv16208008;dbVar:nssv15149911;dbVar:nssv15151402;dbVar:nssv15153655;dbVar:nssv15152885;dbVar:nssv15151403;dbVar:nssv18326313;dbVar:nssv15149508;dbVar:nssv16208007;dbVar:nssv15151241;dbVar:nssv15150601;dbVar:nssv15150625;dbVar:nssv17977082;dbVar:nssv15145995;dbVar:nssv15151861;dbVar:nssv16255066;dbVar:nssv16208006;dbVar:nssv16208011;dbVar:nssv15142295;dbVar:nssv16208010;dbVar:nssv15153656;dbVar:nssv15152886;dbVar:nssv15137538;dbVar:nssv15153657;dbVar:nssv17976724;dbVar:nssv15146000;dbVar:nssv17956677;dbVar:nssv18330187;dbVar:nssv18329119;dbVar:nssv18329189;dbVar:nssv15606071;dbVar:nssv15606072;dbVar:nssv16213555;dbVar:nssv16213990;dbVar:nssv18787102;dbVar:nssv18790308	5:2-32091038;5:10002-14320109;5:13201-4012072;5:22150-10044199;5:22150-11429370;5:22150-11530503;5:22150-12004203;5:22150-12820111;5:22150-13362684;5:22150-1429714;5:22150-16584684;5:22150-16930125;5:22150-17788806;5:22150-1826370;5:22150-21217229;5:22150-21726469;5:22150-22775404;5:22150-23132155;5:22150-24835567;5:22150-25699714;5:22150-26594000;5:22150-27188057;5:22150-27485726;5:22150-27611270;5:22150-27788723;5:22150-28429348;5:22150-28589299;5:22150-29048823;5:22150-2965987;5:22150-32248116;5:22150-34041196;5:22150-3404358;5:22150-3557056;5:22150-35831640;5:22150-4163847;5:22150-4260264;5:22150-4641409;5:22150-4833739;5:22150-5060009;5:22150-5102699;5:22150-6060215;5:22150-6112711;5:22150-6500967;5:22150-7213388;5:22150-9958240;5:22420-19281001;5:25329-18662625;5:25329-30672798;5:25329-31343671;5:37693-2747022;5:37693-2913319;5:37694-11347262;5:50094-15678560;5:50094-30112642;5:50094-4014761;5:52187-4163906;5:54955-5603514;5:71905-22078969;5:79147-15509107;5:79147-22152284;5:95244-5834664;5:113577-10163809;5:113577-10729838;5:113577-11767720;5:113577-12601027;5:113577-14684471;5:113577-14738180;5:113577-15291661;5:113577-15822225;5:113577-1708530;5:113577-1816055;5:113577-19167699;5:113577-2027194;5:113577-23047959;5:113577-23364376;5:113577-25091472;5:113577-26234903;5:113577-26948599;5:113577-30712376;5:113577-33998394;5:113577-4175855;5:113577-4305172;5:113577-4325585;5:113577-5194484;5:113577-5380741;5:113577-5657333;5:113577-5884399;5:113577-6125331;5:113577-6244090;5:113577-7946262;5:113577-8007018;5:113577-8876045;5:113578-16952167;5:113578-17654787;5:113578-26164852;5:113578-31448527;5:140475-26906925;5:140475-9792158;5:218462-1295161;5:218465-1297488;5:218472-1895829;5:482644-1895829	0.17;0.38;1.35;0.54;0.47;0.47;0.45;0.42;0.40;3.82;0.32;0.32;0.30;2.98;0.25;0.25;0.24;0.23;0.22;0.21;0.20;0.20;0.20;0.20;0.19;0.19;0.19;0.19;1.83;0.17;0.16;1.59;1.52;0.15;1.30;1.27;1.16;1.12;1.07;1.06;0.89;0.88;0.83;0.75;0.54;0.28;0.29;0.18;0.17;1.99;1.87;0.48;0.34;0.18;1.36;1.31;0.97;0.24;0.35;0.24;0.94;0.54;0.51;0.46;0.43;0.37;0.37;0.35;0.34;3.37;3.16;0.28;2.81;0.23;0.23;0.22;0.21;0.20;0.18;0.16;1.32;1.28;1.28;1.06;1.02;0.97;0.93;0.90;0.88;0.69;0.68;0.61;0.32;0.31;0.21;0.17;0.20;0.56;5.00;4.99;3.21;3.81			DDD:16279;DDD:16284;dgv131e203	5:653582-875018;5:686604-840273;5:708603-865477	0.1231	DDD:16279;DDD:16284;dgv1000e199;dgv131e203	5:653582-875018;5:682475-788359;5:686604-840273;5:708603-865477	0.0497				IMH	5:238915-1591166;5:244073-1583559;5:244336-1583852;5:261961-1570436	0.2771			5:686604-840273 DDD:16279;5:714989-733938 1000g;5:714989-733938 1000g;5:717638-748444 DDD:16285;5:757677-778933 1000g;5:757677-778933 1000g;5:763398-838450 DDD:16291	5:653582-875018 dgv131e203;5:708603-865477 DDD:16284;5:714989-733938 1000g;5:714989-733938 dgv1061e214;5:754104-754760 IMH;5:757677-778933 1000g;5:757677-778933 dgv1062e214			5:682475-788359 dgv1000e199;5:708603-865477 DDD:16284;5:714989-733938 1000g;chr5:724284-724491 dbVar;5:747151-776399 DDD:16288;chr5:757676-778933 dbVar;5:757677-778933 esv3603772;chr5:764454-764539 dbVar;	5:653582-875018 dgv131e203;5:686604-840273 DDD:16279;chr5:714988-733938 dbVar;5:714989-733938 esv3603766;chr5:725960-726319 dbVar;5:747846-753492 esv2673755;5:757677-778933 1000g;5:763398-838450 DDD:16291;chr5:774523-774617 dbVar	0.395	0.580	5:721917-723166	L1ME3F					5:686123-731394	5:770128-777143								98.37				0.535222227518795	-0.0274451648003615												8	3.6787e-13	4.3228e-02	0.0	1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2E (cf B_gain_source, +0.00);2L (ZDHHC11B, +0.00);3A (1 gene, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)	3
5_723195_777000_DUP_1	5	723195	777000	53806	DUP		Benign	NA	split	p15.33	ZDHHC11B				NM_001351303	2	710469	784844	53806	1058	94	yes	14	intron1-intron12	5'UTR-CDS	6214	3'	723194	777000																										DDD:16279;DDD:16284;dgv131e203	5:653582-875018;5:686604-840273;5:708603-865477	0.1231	DDD:16279;DDD:16284;dgv1000e199;dgv131e203	5:653582-875018;5:682475-788359;5:686604-840273;5:708603-865477	0.0497				IMH	5:238915-1591166;5:244073-1583559;5:244336-1583852;5:261961-1570436	0.2771																										98.37				0.535222227518795	-0.0274451648003615					653082	HGNC:32962						8	3.6787e-13	4.3228e-02			full=3
7_38296177_38352444_DEL_1	7	38296177	38352444	-56268	DEL		Benign	NA	full	p14.1	TARP	STARD3NL	TRG-AS1	1																SFRP4 (morbid/RE=ABC_enhancer);VPS41 (morbid/RE=ABC_enhancer)															dbVar:nssv15777247;dbVar:nssv15168013;dbVar:nssv15161666;nssv15161679;dbVar:nssv15168014;dbVar:nssv15161726;dbVar:nssv15161869;dbVar:nssv17970205;dbVar:nssv15154527;dbVar:nssv15146465;dbVar:nssv15166972	7:10366-159119707;7:10705-159122532;7:43362-159119707;7:44936-159126310;7:54186-41915483;7:11048841-52863626;7:27507833-39072473;7:30463887-43470805;7:33367925-61831899;7:37213109-40255122	0.04;0.04;0.04;0.04;0.13;0.13;0.49;0.43;0.20;1.85			dbVar:nssv15161318;dbVar:nssv15147510;dbVar:nssv15148432;dbVar:nssv15147453;dbVar:nssv15145850;dbVar:nssv15148950	7:54186-159075079;7:32718004-41084581;7:32911004-44576005;7:35500387-42053399;7:37343083-48700334;7:38217602-45343699	0.04;0.67;0.48;0.86;0.50;0.79			dgv1888e212	7:38286516-38394857	0.0100							IMH	7:23891013-65526751;7:33013222-55782515	0.3810			7:38286516-38394857 dgv1888e212	7:38283523-38309532 DDD:23873			chr7:38309816-38312727 dbVar;chr7:38312421-38313034 dbVar;chr7:38318010-38318532 dbVar;chr7:38321639-38325867 dbVar;chr7:38325667-38325867 dbVar;chr7:38325667-38328166 dbVar;chr7:38331989-38335441 dbVar;chr7:38331989-38336295 dbVar;chr7:38348388-38349972 dbVar	chr7:38295995-38331222 dbVar;chr7:38309816-38313034 dbVar;chr7:38315910-38331224 dbVar;chr7:38321639-38325667 dbVar;chr7:38321639-38326916 dbVar;chr7:38325667-38327016 dbVar;chr7:38325867-38328166 dbVar;chr7:38331989-38335610 dbVar;chr7:38335441-38335779 dbVar	0.365	0.320	7:38296252-38296527	AluSx					7:38284220-38298557																													0.0	1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;2G (cf po_B_loss_someG_source, +0.00);3A (1 gene, +0.00);5F (+0.00)	3
7_38296177_38352444_DEL_1	7	38296177	38352444	-56268	DEL		Benign	NA	split	p14.1	TARP				NM_001003806	2	38299243	38313237	13994	336	100	no	4	txStart-txEnd	5'UTR-3'UTR			38299243	38313237																										dgv1888e212	7:38286516-38394857	0.0100	dbVar	chr7:38295995-38331222	0.01				IMH	7:23891013-65526751;7:33013222-55782515	0.3810																																																full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	full	p23.1	FAM66B;DEFB109B;USP17L1;USP17L4;ZNF705G;DEFB4B;DEFB103B;SPAG11B;DEFB104B;DEFB106B;DEFB105B;DEFB107B;PRR23D1;FAM90A7;FAM90A22;FAM90A23;FAM90A14;FAM90A18;FAM90A16;FAM90A8;FAM90A17;FAM90A19;FAM90A9;FAM90A10;PRR23D2;DEFB107A;DEFB105A;DEFB106A;DEFB104A;SPAG11A;DEFB103A;DEFB4A	FAM90A20	ZNF705B	32																MCPH1 (morbid/RE=ABC_enhancer+GH_promoter_enhancer)															dbVar:nssv15169207;dbVar:nssv15128680;dbVar:nssv15161508;dbVar:nssv15161747;dbVar:nssv17976867;dbVar:nssv17957391;dbVar:nssv15154583;dbVar:nssv15161801;nssv15777239;nssv17976962;dbVar:nssv15154584;dbVar:nssv16206921;dbVar:nssv15154580;dbVar:nssv15161417;nssv15161657;dbVar:nssv15147671;dbVar:nssv15161846;dbVar:nssv15150473;dbVar:nssv15127651;dbVar:nssv15149098;dbVar:nssv15169210;dbVar:nssv15154582;dbVar:nssv15146537;dbVar:nssv15161807;dbVar:nssv15161553;dbVar:nssv15161105;dbVar:nssv15161095;dbVar:nssv15161561;dbVar:nssv15161078;dbVar:nssv15147455;dbVar:nssv16736635;dbVar:nssv15161269;dbVar:nssv15161748;dbVar:nssv15161749;dbVar:nssv15143576;dbVar:nssv15161775;dbVar:nssv15146180;dbVar:nssv15161087;dbVar:nssv15161068;dbVar:nssv15161792;dbVar:nssv15606063;dbVar:nssv15151542;dbVar:nssv15161084;dbVar:nssv16206931;dbVar:nssv15154577;dbVar:nssv15161089;dbVar:nssv15151538;dbVar:nssv15152254;dbVar:nssv18842054;dbVar:nssv15161540;dbVar:nssv15161727;dbVar:nssv15161764	8:10214-146293414;8:13939-146304022;8:46311-11879315;8:46311-30472220;8:158049-10348413;8:158049-11936107;8:158049-13974319;8:158049-146295771;8:158049-15423270;8:158049-8102819;8:158049-9750676;8:158050-146295771;8:158992-13304906;8:158992-146280828;8:158992-17536147;8:163683-46938942;8:164985-11860845;8:164985-146293414;8:168484-13147575;8:169854-10022996;8:176453-12556063;8:176453-12570496;8:176453-146294098;8:176453-16137655;8:176453-34349408;8:176453-37879246;8:176453-7838959;8:176815-43396776;8:191531-146274835;8:191531-146280020;8:191531-17536206;8:191531-22404983;8:191531-23055911;8:191531-7752586;8:191606-146280167;8:191606-24514484;8:191606-30948590;8:194618-13947374;8:1825201-24533193;8:6961184-12157391;8:6999220-11895232;8:6999220-11898980;8:6999220-38553064;8:6999220-8881836;8:7053187-11805960;8:7080282-12045269;8:7169491-12404062;8:7268820-12039974;8:7691902-12039974	0.40;0.40;4.94;1.92;5.73;4.96;4.23;0.40;3.83;7.35;6.09;0.40;4.44;0.40;3.36;1.25;4.99;0.40;4.50;5.93;4.72;4.71;0.40;3.66;1.71;1.55;7.62;1.35;0.40;0.40;3.37;2.63;2.55;7.71;0.40;2.40;1.90;4.25;2.57;11.24;11.93;11.92;1.85;31.03;12.29;11.76;11.16;10.16;1.42			dbVar:nssv15168702;dbVar:nssv15169206;dbVar:nssv18842057;dbVar:nssv17956019;dbVar:nssv15154581;dbVar:nssv18326425;dbVar:nssv15149861;dbVar:nssv15775686;dbVar:nssv17976739;dbVar:nssv16208166;dbVar:nssv15774257;dbVar:nssv15149509;dbVar:nssv18330306;dbVar:nssv18329623;dbVar:nssv16216869;dbVar:nssv15169209;dbVar:nssv15223191;dbVar:nssv15147275;dbVar:nssv15148964;dbVar:nssv15147296;dbVar:nssv15146181;nssv15146816;dbVar:nssv15606064;dbVar:nssv15146660;dbVar:nssv18841910;dbVar:nssv15161264;nssv15161582;dbVar:nssv15145917;dbVar:nssv15161283;dbVar:nssv15161284;dbVar:nssv15161070;dbVar:nssv15141976;dbVar:nssv15161050	8:10214-10197718;8:10214-8948469;8:10502-11142629;8:10502-7214947;8:158049-10939681;8:158049-11281408;8:158049-13309069;8:158049-14214722;8:158049-30187456;8:158049-9025197;8:158049-9393052;8:158049-9749574;8:158050-10965627;8:158050-18936715;8:161517-11516619;8:164985-10007227;8:176815-7753583;8:191531-10049105;8:191531-10315994;8:191531-10724642;8:191531-7752586;8:194618-7787444;8:360370-7334625;8:399894-23712417;8:2292236-27361796;8:3791728-11384448;8:7053187-12241152;8:7092360-12372324;8:7169491-12404062;8:7268820-11805960;8:7268820-11819316	5.73;6.53;5.25;0.63;5.42;5.25;4.44;4.16;1.95;6.59;6.32;6.09;5.40;3.11;5.14;5.93;7.71;5.93;5.77;5.55;7.71;7.69;2.37;2.51;2.33;7.69;11.26;11.06;11.16;10.68;10.65			DDD:26674;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237									8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 TS40:ISCA-37472;8:7170611-7177489 nsv515099;8:7201176-7392220 DDD:26689;8:7212583-7227421 1000g;8:7212583-7227421 TS40:ISCA-46631;8:7241528-7403182 nsv515100;8:7308244-7308706 DDD:26704;8:7632945-7856630 DDD:26727;8:7717878-7717938 DDD:26737;8:7734213-7856702 DDD:26743;8:7737000-7743100 gnomAD-SV_v2.1_DUP_8_23708;8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 TS40:ISCA-37472;8:7170611-7177489 nsv515099;8:7201176-7392220 DDD:26689;8:7212583-7227421 1000g;8:7212583-7227421 TS40:ISCA-46631...	8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;8:7154889-7213289 DDD:26682;8:7190891-7190961 DDD:26685;8:7212583-7227421 1000g;8:7212583-7227421 1000g;8:7212583-7227421 dgv1365e214;8:7250369-7832042 dgv6936n100;8:7401394-7472190 DDD:26720;8:7634705-7829839 DDD:26729;8:7718891-7784263 DDD:26742;8:7737000-7743100 TS40:ISCA-46381;8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;8:7154889-7213289 DDD:26682;8:7190891-7190961 DDD:26685;8:7212583-7227421 1000g;8:7212583-7227421 1000g...			8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 HI40:ISCA-37472;8:7154889-7213289 DDD:26682;8:7158202-7189800 DDD:26683;chr8:7179582-7191032 dbVar;8:7179583-7191032 esv3616115;8:7190891-7190961 DDD:26685;chr8:7201000-7206400 dbVar;chr8:7204184-7204308 dbVar;8:7212583-7227421 1000g;chr8:7221359-7221602 dbVar;8:7228000-7235000 gnomAD-SV_v2.1_DEL_8_89335;chr8:7286205-7286328 dbVar;chr8:7326402-7326559 dbVar;8:7355000-7363000 gnomAD-SV_v2.1_DEL_8_89340;8:7355294-7364762 1000g;8:7401394-7472190 DDD:26720;8:7402900-7419700 gnomAD-SV_v2.1_DEL_8_89341;8:7405950-7443050 gnomAD-SV_v2.1_DEL_8_89342...	8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;chr8:7085462-7537934 dbVar;8:7158046-7189992 esv2675221;chr8:7175745-7175870 dbVar;8:7179583-7191032 1000g;chr8:7180382-7180743 dbVar;8:7190892-7196288 DDD:26687;8:7201000-7206400 gnomAD-SV_v2.1_DEL_8_89332;chr8:7212582-7227421 dbVar;8:7212583-7227421 esv3616116;chr8:7228000-7235000 dbVar;chr8:7276552-7277128 dbVar;8:7308244-7308706 DDD:26704;chr8:7355000-7363000 dbVar;chr8:7355293-7364762 dbVar;8:7355294-7364762 esv3616120;chr8:7402900-7419700 dbVar;chr8:7405950-7443050 dbVar...	0.260	0.330							8:7150797-7184572;8:7150797-7195814;8:7150797-7200543;8:7150798-7238459	8:7600001-7825413	8:7012601-8066200	High Signal Region	8:7012601-8066200	High Signal Region				99.72				2.14121257165536	2.19863945242443												8	4.2180e-01	5.1947e-01	-0.55	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3B (32 genes, +0.45);5F (+0.00)	3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM66B				NR_027423	2	7156265	7212885	43395	0	0	NA	7	txStart-intron6	UTR	9797	3'	7169490	7212885																										DDD:26670;DDD:26674;DDD:26675;DDD:26682;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7154889-7213289	0.2355	DDD:26670;DDD:26674;DDD:26675;DDD:26682;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934;8:7154889-7213289	0.2237																																										100128890	HGNC:28890											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB109B				NM_001037380	2	7170243	7177618	7375	264	100	no	2	txStart-txEnd	5'UTR-3'UTR			7170243	7177618																										DDD:26670;DDD:26674;DDD:26675;DDD:26682;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7154889-7213289	0.2355	DDD:26670;DDD:26674;DDD:26675;DDD:26682;DDD:26683;HI40:ISCA-37472;dbVar;esv2675221;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934;8:7154889-7213289;8:7158046-7189992;8:7158202-7189800	0.2237																																										641517	HGNC:33469											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	USP17L1				NM_001256873	1	7189908	7191501	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			7189908	7191501																										DDD:26670;DDD:26674;DDD:26675;DDD:26682;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7154889-7213289	0.2355	DDD:26670;DDD:26674;DDD:26675;DDD:26682;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934;8:7154889-7213289	0.2237																																										401447	HGNC:37182											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	USP17L4				NM_001256874	1	7194636	7196229	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			7194636	7196229																										DDD:26670;DDD:26674;DDD:26675;DDD:26682;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7154889-7213289	0.2355	DDD:26670;DDD:26674;DDD:26675;DDD:26682;DDD:26687;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934;8:7154889-7213289;8:7190892-7196288	0.2237																																										645402	HGNC:37176											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	ZNF705G				NM_001164457	3	7213038	7243080	30042	903	100	no	7	txStart-txEnd	5'UTR-3'UTR			7213038	7243080																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																91.1				-1.59751875296103	-3.97736276921453					100131980	HGNC:37134						9	1.6471e-08	4.2486e-09			full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB4B				NM_001205266	2	7272376	7274385	2009	195	100	no	2	txStart-txEnd	5'UTR-3'UTR			7272376	7274385																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																99.72										100289462	HGNC:30193						9	6.7977e-02				full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB103B				NM_018661	4	7286409	7287870	1461	204	100	no	2	txStart-txEnd	5'UTR-3'UTR			7286409	7287870																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																85.97										55894	HGNC:31702											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	SPAG11B				NM_058201	4	7308124	7321064	12940	402	100	no	3	txStart-txEnd	5'UTR-3'UTR			7308124	7321064																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																89.4				2.14121257165536	1.8677219993927					10407	HGNC:14534						9	2.7751e-02	4.7238e-02			full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB104B				NM_001040702	1	7327829	7332604	4775	219	100	no	2	txStart-txEnd	5'UTR-3'UTR			7327829	7332604																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																95.66										503618	HGNC:26165						9	3.3176e-01				full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB106B				NM_001040704	2	7340025	7343922	3897	198	100	no	2	txStart-txEnd	5'UTR-3'UTR			7340025	7343922																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																93.29										503841	HGNC:28879						9	8.1151e-02				full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB105B				NM_001040703	3	7345200	7347115	1915	237	100	no	3	txStart-txEnd	5'UTR-3'UTR			7345200	7347115																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																90.95										504180	HGNC:29930						9	2.9184e-01				full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB107B				NM_001040705	2	7353432	7366833	13401	213	100	no	2	txStart-txEnd	5'UTR-3'UTR			7353432	7366833																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																91.71										503614	HGNC:31918											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	PRR23D1				NM_001282479	1	7397148	7399972	2824	840	100	no	4	txStart-txEnd	5'UTR-3'UTR			7397148	7399972																										DDD:26674;DDD:26675;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																										100131608	HGNC:49420						8	4.2180e-01				full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM90A7				NM_001397387	1	7414221	7417234	3013	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7414221	7417234																										DDD:26674;DDD:26675;DDD:26720;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7250369-7832042;8:7401394-7472190	0.2355	DDD:26674;DDD:26675;DDD:26720;HI40:ISCA-37472;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89341;gnomAD-SV_v2.1_DEL_8_89342	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934;8:7401394-7472190;chr8:7402900-7419700;8:7402900-7419700;chr8:7405950-7443050;8:7405950-7443050	0.5803																																										441317	HGNC:32255											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM90A22				NM_001397382	1	7429516	7432528	3012	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7429516	7432528																										DDD:26674;DDD:26720;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7401394-7472190	0.2355	DDD:26674;DDD:26720;HI40:ISCA-37472;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89342	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;chr8:7085462-7537934;8:7401394-7472190;chr8:7405950-7443050;8:7405950-7443050	0.4842																																										645558	HGNC:32270											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM90A23				NM_001397380	1	7437165	7440175	3010	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7437165	7440175																										DDD:26674;DDD:26720;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7401394-7472190	0.2355	DDD:26674;DDD:26720;HI40:ISCA-37472;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89342	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;chr8:7085462-7537934;8:7401394-7472190;chr8:7405950-7443050;8:7405950-7443050	0.4842																																										645572	HGNC:32271											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM90A14				NM_001164452	1	7572964	7575975	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7572964	7575975																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										645651	HGNC:32262											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM90A18				NM_001164451	1	7580612	7583623	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7580612	7583623																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										441326	HGNC:32266											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM90A16				NM_001397396	1	7588260	7591271	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7588260	7591271																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										441323	HGNC:32264											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM90A8				NM_001164450	1	7595908	7598918	3010	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7595908	7598918																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										441324	HGNC:32256											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM90A17				NM_001397391	1	7603555	7606566	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7603555	7606566																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										728746	HGNC:32265											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM90A19				NM_001164449	1	7611203	7614214	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7611203	7614214																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										728753	HGNC:32267											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM90A9				NM_001164448	1	7618851	7621862	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7618851	7621862																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										441327	HGNC:32257											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	FAM90A10				NM_001164447	1	7626498	7629510	3012	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7626498	7629510																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										441328	HGNC:32258											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	PRR23D2				NM_001282478	1	7636112	7638935	2823	840	100	no	4	txStart-txEnd	5'UTR-3'UTR			7636112	7638935																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																										100133251	HGNC:49396											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB107A				NM_001037668	1	7669241	7673238	3997	213	100	no	2	txStart-txEnd	5'UTR-3'UTR			7669241	7673238																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																92.48										245910	HGNC:18086						9	3.2633e-01				full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB105A				NM_152250	3	7678525	7681402	2877	237	100	no	3	txStart-txEnd	5'UTR-3'UTR			7678525	7681402																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																90.61				0.918523398770926	0.00809335391872301					245908	HGNC:18087						8	3.7719e-01	4.3625e-01			full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB106A				NM_152251	4	7682660	7686575	3915	198	100	no	2	txStart-txEnd	5'UTR-3'UTR			7682660	7686575																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																90.45				0.676417083229402	1.6332400949348					245909	HGNC:18088						9	8.5821e-03	4.0931e-01			full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB104A				NM_080389	3	7693957	7698764	4807	219	100	no	2	txStart-txEnd	5'UTR-3'UTR			7693957	7698764																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																96.98				1.33624136747443	2.19863945242443					140596	HGNC:18115						9	9.3748e-02	5.1947e-01			full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	SPAG11A				NM_001395484	1	7705529	7718465	12936	402	100	no	3	txStart-txEnd	5'UTR-3'UTR			7705529	7718465																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																97.15				0.140072348156658	0.903069021299127					653423	HGNC:33342						9	6.9645e-05	3.9012e-02			full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB103A				NM_001081551	4	7738913	7740185	1272	204	100	no	2	txStart-txEnd	5'UTR-3'UTR			7738913	7740185																										DDD:26674;DDD:26727;DDD:26729;DDD:26742;DDD:26743;TS40:ISCA-37472;TS40:ISCA-46381;dgv6936n100;esv2761169;esv2764098;gnomAD-SV_v2.1_DUP_8_23708	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839;8:7718891-7784263;8:7734213-7856702;8:7737000-7743100;8:7737000-7743100	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;HI40:ISCA-46380;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89353	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630;8:7736500-7764500;chr8:7736500-7764500;8:7736500-7764500	0.3262																																93.4										414325	HGNC:15967											full=3
8_7169491_7753583_DEL_1	8	7169491	7753583	-584093	DEL		Benign	NA	split	p23.1	DEFB4A				NM_004942	4	7752198	7754238	1385	58	29	yes	2	txStart-intron1	5'UTR-CDS	412	3'	7752198	7753583																										DDD:26674;DDD:26727;DDD:26729;DDD:26742;DDD:26743;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839;8:7718891-7784263;8:7734213-7856702	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;HI40:ISCA-46380;HI40:ISCA-46382;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89353;gnomAD-SV_v2.1_DEL_8_89355	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630;8:7736500-7764500;chr8:7736500-7764500;8:7736500-7764500;8:7745000-7754100;chr8:7745000-7754100;8:7745000-7754100	0.5182																																97.87				1.12959151611996	0.758429673080804					1673	HGNC:2767						9	1.1637e-03	3.9981e-01			full=3
1_149041934_149209289_DEL_1	1	149041934	149209289	-167356	DEL		Benign	NA	full	q21.2	RNVU1-17	LSP1P5	RNVU1-18	1																															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv18842007;dbVar:nssv15140065;dbVar:nssv15127264;dbVar:nssv15140622;dbVar:nssv15142143;dbVar:nssv15139736;dbVar:nssv15136257;dbVar:nssv15137789;dbVar:nssv15135435;dbVar:nssv15132352;dbVar:nssv15127572;dbVar:nssv16736643;dbVar:nssv15135787;dbVar:nssv15121048;dbVar:nssv15132855	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:142535936-157648813;1:143500224-149763815;1:143544036-149754161;1:143753741-151399970;1:143932351-149801420;1:144927579-153223600;1:145425396-149091187;1:145425396-149699420;1:145425396-149768855;1:145451330-156102366;1:145764500-249233096;1:145818703-149378266;1:146500973-149433185;1:147400638-149813625;1:147411535-149699420	0.07;0.07;0.07;1.11;2.67;2.69;2.19;2.85;2.02;1.34;3.92;3.85;1.57;0.16;4.70;5.71;6.94;7.31			dbVar:nssv15132982;dbVar:nssv15133379;dbVar:nssv15137633;dbVar:nssv15137132;dbVar:nssv15136850;dbVar:nssv15132445;dbVar:nssv15137470;dbVar:nssv15135169;dbVar:nssv15129680;dbVar:nssv15157514;dbVar:nssv15133691;dbVar:nssv15132524;dbVar:nssv15137778	1:143721527-149232481;1:145388356-149418924;1:145415157-149433207;1:145626238-149244468;1:145626238-149453964;1:145655993-149232481;1:145747243-149155026;1:145987157-149232481;1:146053395-249233096;1:146089269-149376652;1:146143190-149232481;1:146143190-149699420;1:146507650-149433207	3.04;4.15;4.17;4.63;4.37;4.68;3.32;5.16;0.16;5.09;5.42;4.71;5.72			DDD:2784;DDD:2806;TS40:ISCA-37469;dgv4e203;nsv514006	1:147929337-149801433;1:148050780-149739249;1:148867552-149768855;1:149034710-149405578;1:149036513-149244464	0.0800	DDD:2784;DDD:2806;HI40:ISCA-37469;dgv375n100;dgv4e203;esv2422083;esv3894145	1:147929337-149801433;1:148050780-149739249;1:148867552-149768855;1:149034710-149405578;1:149036513-149278459;1:149036525-149256691;1:149039121-149211496	0.3041				IMH	1:4599855-170869838;1:17124869-234920285;1:17225077-149220997;1:17229845-149217063;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.4999			1:148050780-149739249 DDD:2784;1:149034710-149405578 DDD:2806;1:149071635-149169501 1000g;1:149151839-149203736 1000g;1:149207861-149218152 1000g;	1:147929337-149801433 dgv4e203;1:148867552-149768855 TS40:ISCA-37469;1:149036513-149244464 nsv514006;1:149071635-149169501 esv3587467;1:149151839-149203736 esv3587470;1:149207861-149218152 esv3587472			1:148050780-149739249 DDD:2784;1:149034710-149405578 DDD:2806;1:149035900-149053900 gnomAD-SV_v2.1_DEL_1_7834;1:149035900-149204000 gnomAD-SV_v2.1_DEL_1_7835;1:149036525-149256691 esv2422083;chr1:149046220-149046341 dbVar;1:149064634-149080509 gnomAD-SV_v2.1_DEL_1_7837;chr1:149071634-149169501 dbVar;1:149071635-149169501 esv3587466;chr1:149090849-149092378 dbVar;1:149090850-149092378 esv3587468;chr1:149132411-149132504 dbVar;chr1:149134000-149204000 dbVar;chr1:149139251-149139476 dbVar;chr1:149151838-149203736 dbVar;1:149151839-149203736 esv3587469;chr1:149156359-149156429 dbVar;chr1:149159117-149159254 dbVar;chr1:149173738-149173810 dbVar;1:149202746-149436842 DDD:2817...	1:147929337-149801433 dgv4e203;1:148867552-149768855 HI40:ISCA-37469;chr1:149035900-149053900 dbVar;chr1:149035900-149204000 dbVar;1:149036513-149278459 dgv375n100;1:149039121-149211496 esv3894145;chr1:149064634-149080509 dbVar;chr1:149065069-149065232 dbVar;1:149071635-149169501 1000g;chr1:149077419-149077503 dbVar;1:149090850-149092378 1000g;chr1:149132411-149132463 dbVar;chr1:149133674-149133762 dbVar;1:149134000-149204000 gnomAD-SV_v2.1_DEL_1_7844;1:149145234-149244654 DDD:2814;1:149151839-149203736 1000g;1:149152065-149204067 HI40:ISCA-46570;chr1:149158275-149158337 dbVar;chr1:149162118-149162210 dbVar;chr1:149191596-149191654 dbVar...	0.455	0.440			1:149209192-149209220	(GA)n			1:149035966-149106186	1:149191324-149214601;1:149200001-149214601	1:147832001-149058800	High Signal Region																										-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)	1
1_149041934_149209289_DEL_1	1	149041934	149209289	-167356	DEL		Benign	NA	split	q21.2	RNVU1-17				NR_104078	1	149194105	149194269	164	0	0	NA	1	txStart-txEnd	UTR			149194105	149194269																										1000g;DDD:2784;DDD:2806;TS40:ISCA-37469;dgv4e203;esv3587470;nsv514006	1:147929337-149801433;1:148050780-149739249;1:148867552-149768855;1:149034710-149405578;1:149036513-149244464;1:149151839-149203736;1:149151839-149203736	0.0800	1000g;DDD:2784;DDD:2806;DDD:2814;HI40:ISCA-37469;HI40:ISCA-46570;dbVar;dgv375n100;dgv4e203;esv2422083;esv3587469;esv3894145;gnomAD-SV_v2.1_DEL_1_7835;gnomAD-SV_v2.1_DEL_1_7844	1:147929337-149801433;1:148050780-149739249;1:148867552-149768855;1:149034710-149405578;chr1:149035900-149204000;1:149035900-149204000;1:149036513-149278459;1:149036525-149256691;1:149039121-149211496;chr1:149134000-149204000;1:149134000-149204000;1:149145234-149244654;chr1:149151838-149203736;1:149151839-149203736;1:149151839-149203736;1:149152065-149204067	0.3041				IMH	1:4599855-170869838;1:17124869-234920285;1:17225077-149220997;1:17229845-149217063;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.4999																																				101954269	HGNC:48322											full=1
1_248738899_248785562_DEL_1	1	248738899	248785562	-46664	DEL		Benign	NA	full	q44	OR2T10	OR2T34	OR2T11	1																															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15777262;dbVar:nssv15151024;dbVar:nssv18326443;dbVar:nssv16207620;dbVar:nssv15146793;dbVar:nssv15147003;dbVar:nssv15146656;dbVar:nssv16215284;dbVar:nssv15145669;dbVar:nssv15154064;dbVar:nssv15146178;dbVar:nssv18329268;dbVar:nssv15147314;dbVar:nssv15147005;dbVar:nssv15146390;dbVar:nssv15150211;dbVar:nssv15147383;dbVar:nssv15146391;dbVar:nssv15126459;dbVar:nssv15146018;dbVar:nssv15156411;dbVar:nssv15147341;dbVar:nssv15149590;dbVar:nssv15170725;dbVar:nssv15149119;dbVar:nssv15774642;dbVar:nssv15776729;dbVar:nssv15145719;dbVar:nssv15142850;dbVar:nssv15140102;dbVar:nssv15119915;dbVar:nssv15135164;dbVar:nssv18330767;dbVar:nssv15142418;dbVar:nssv15133070;dbVar:nssv15128248;dbVar:nssv18326380	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:182388774-249111240;1:195483440-249213000;1:197867915-249224684;1:204045949-249218992;1:207519988-249224684;1:209819553-249225312;1:210136971-249212668;1:210152795-249218992;1:214197156-249212668;1:218252552-249224684;1:223521036-249212668;1:223972940-249224684;1:224002850-249212668;1:224016203-249185508;1:224075483-249185508;1:224105295-249224684;1:224210565-249212668;1:224284191-249212668;1:225049988-249233096;1:225626183-249060210;1:228529974-249181598;1:229158657-249212668;1:231670871-249213000;1:232232336-249218992;1:234050865-249213059;1:235582581-249224684;1:238669294-249224684;1:240407745-249185508;1:242324399-249224684;1:242656461-249213000;1:242992034-249185508;1:243095879-249158835;1:243258051-249224684;1:244197792-249224684;1:245476118-249212668;1:245665464-249233096;1:246850402-249205263	0.02;0.02;0.02;0.05;0.07;0.09;0.09;0.10;0.11;0.12;0.12;0.12;0.13;0.15;0.18;0.18;0.19;0.19;0.19;0.19;0.19;0.19;0.19;0.20;0.23;0.23;0.27;0.27;0.31;0.34;0.44;0.53;0.68;0.71;0.75;0.77;0.78;0.93;1.25;1.31;1.98			dbVar:nssv15129680;dbVar:nssv18326340;dbVar:nssv15149874;dbVar:nssv15148823;dbVar:nssv15148210;dbVar:nssv15148138;dbVar:nssv15148243;dbVar:nssv15146635;dbVar:nssv15146644;dbVar:nssv15146499;dbVar:nssv15146500;dbVar:nssv18330244;dbVar:nssv15145856;dbVar:nssv15153348;dbVar:nssv15146579;dbVar:nssv15131783;dbVar:nssv18329412;dbVar:nssv15138053;dbVar:nssv15124424;dbVar:nssv18841999;dbVar:nssv15126240;dbVar:nssv15133004;dbVar:nssv15771899;dbVar:nssv15133645;dbVar:nssv15153353;dbVar:nssv15605763;dbVar:nssv18792785;dbVar:nssv15772690;dbVar:nssv16255440	1:146053395-249233096;1:233012995-249206918;1:235797385-249224684;1:236719383-249212668;1:237806582-249212668;1:238196876-249218733;1:238356181-249224684;1:238514422-249212668;1:238917050-249212666;1:239721731-249212668;1:239793169-249218792;1:239910961-249224684;1:240628423-249212668;1:241051171-249224684;1:241210723-249218792;1:241920552-249185508;1:242045198-249212668;1:242208582-249224684;1:243103402-249119318;1:243384761-249213309;1:243477621-249233096;1:243949932-249212668;1:244379482-249224684;1:244745426-249212668;1:244797640-249224684;1:245341154-249212429;1:245704070-249212562;1:246565045-249224684;1:246853200-249181899	0.05;0.29;0.35;0.37;0.41;0.42;0.43;0.44;0.45;0.49;0.50;0.50;0.54;0.57;0.58;0.64;0.65;0.67;0.78;0.80;0.81;0.89;0.96;1.04;1.05;1.21;1.33;1.75;2.00						DDD:4636;DDD:4639;HI40:ISCA-46339;dbVar;dgv166e212;dgv630n100;esv2760083;esv2763780;gnomAD-SV_v2.1_DEL_1_13889	1:248605753-248818483;1:248683401-248814080;1:248688222-248828223;1:248693963-248856466;1:248727631-248859425;1:248731000-248798200;chr1:248731000-248798200;1:248731000-248798200;1:248737436-248818471	0.2767				IMH	1:248596196-248822398;1:248601499-248817009;1:248601686-248817033;1:248602851-248816084;1:248606626-248811646;1:248609654-248808661	0.4394				1:248756742-248797597 1000g			1:248605753-248818483 esv2760083;1:248688222-248828223 dgv166e212;1:248712455-248757403 HI40:ISCA-46337;1:248712455-248757403 gnomAD-SV_v2.1_DEL_1_13885;1:248729000-248743000 HI40:ISCA-46338;1:248729000-248743000 gnomAD-SV_v2.1_DEL_1_13888;chr1:248731000-248798200 dbVar;1:248737436-248818471 dgv630n100;chr1:248738000-248744000 dbVar;1:248739346-248798392 esv2660478;1:248739502-248798200 DDD:4645;chr1:248741000-248749000 dbVar;chr1:248742276-248742334 dbVar;1:248753185-248795277 dgv167e212;chr1:248755655-248758478 dbVar;1:248755656-248758478 HI40:ISCA-46577;1:248755670-248758483 DDD:4648;chr1:248756741-248797597 dbVar;1:248756742-248797597 esv3589559;	chr1:248469040-248768529 dbVar;1:248683401-248814080 esv2763780;1:248693963-248856466 DDD:4636;chr1:248712455-248757403 dbVar;1:248727631-248859425 DDD:4639;chr1:248729000-248743000 dbVar;1:248731000-248798200 HI40:ISCA-46339;1:248731000-248798200 gnomAD-SV_v2.1_DEL_1_13889;1:248738000-248744000 HI40:ISCA-46340;1:248738000-248744000 gnomAD-SV_v2.1_DEL_1_13890;chr1:248739419-248739472 dbVar;1:248739517-248797213 esv2421359;1:248741000-248749000 gnomAD-SV_v2.1_DEL_1_13892;1:248749183-248797201 dgv633n100;1:248753986-248795457 nsv514048;1:248755656-248758478 1000g;1:248755656-248758478 esv3589558;chr1:248755674-248758483 dbVar;1:248756742-248797597 1000g;1:248756881-248797809 HI40:ISCA-46576	0.305	0.330							1:248692097-248751707									92.08				0.553342166544692	-0.565086620797697												9	6.5559e-04	1.5575e-04	-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)	1
1_248738899_248785562_DEL_1	1	248738899	248785562	-46664	DEL		Benign	NA	split	q44	OR2T10				NM_001004693	2	248753787	248761001	7214	939	97	no	2	txStart-txEnd	5'UTR-3'UTR			248753787	248761001																													DDD:4636;DDD:4639;DDD:4645;HI40:ISCA-46339;dbVar;dgv166e212;dgv167e212;dgv630n100;dgv633n100;esv2421359;esv2660478;esv2760083;esv2763780;gnomAD-SV_v2.1_DEL_1_13889	chr1:248469040-248768529;1:248605753-248818483;1:248683401-248814080;1:248688222-248828223;1:248693963-248856466;1:248727631-248859425;1:248731000-248798200;chr1:248731000-248798200;1:248731000-248798200;1:248737436-248818471;1:248739346-248798392;1:248739502-248798200;1:248739517-248797213;1:248749183-248797201;1:248753185-248795277	0.2767				IMH	1:248596196-248822398;1:248601499-248817009;1:248601686-248817033;1:248602851-248816084;1:248606626-248811646;1:248609654-248808661	0.4394																										92.08				0.553342166544692	-0.565086620797697					127069	HGNC:19573						9	6.5559e-04	1.5575e-04			full=1
10_46976158_47590995_DUP_1	10	46976158	47590995	614838	DUP		Benign	NA	full	q11.22	GPRIN2;NPY4R;LINC00842;HNRNPA1P33;ANXA8L1;FAM25BP;AGAP14P;SHLD2P3;ANTXRLP1	SYT15	LOC105378577	9																GDF2 (morbid/RE=ABC_enhancer)															dbVar:nssv15171419;dbVar:nssv15161644;dbVar:nssv15171420;dbVar:nssv15161671;dbVar:nssv15161670;nssv15161864;dbVar:nssv18830975;dbVar:nssv15148987;dbVar:nssv15146649;dbVar:nssv15148014;dbVar:nssv15147999;dbVar:nssv15127252;dbVar:nssv15149138;dbVar:nssv15160810;dbVar:nssv15153822;dbVar:nssv18329611;dbVar:nssv15157044;dbVar:nssv15774462	10:73233-135524321;10:93298-135378918;10:98088-135477883;10:100027-50961640;10:100028-135427143;10:11138693-135427143;10:42607636-69160433;10:42890650-52636819;10:43180755-75475666;10:43379743-54025077;10:43957497-55681185;10:46242058-51595050;10:46591858-51028871;10:46966534-51822386;10:46966535-51903756;10:47049548-51903662;10:47148814-51626260	0.45;0.45;0.45;1.21;0.45;0.49;2.32;6.31;1.90;5.78;5.24;11.49;13.86;12.66;12.45;11.15;9.88			dbVar:nssv18830989;dbVar:nssv18792766;dbVar:nssv15148974;dbVar:nssv15147055;dbVar:nssv15147325;dbVar:nssv15149769;dbVar:nssv15153824;dbVar:nssv15775323;dbVar:nssv18330284;dbVar:nssv18842061;dbVar:nssv18326311;dbVar:nssv15152293;dbVar:nssv15147381;dbVar:nssv15149118;dbVar:nssv15148000;dbVar:nssv15148874;dbVar:nssv15605856;dbVar:nssv17976988;dbVar:nssv16252224;dbVar:nssv15153821;dbVar:nssv15155360;dbVar:nssv15153823;nssv15775280;dbVar:nssv15149894;dbVar:nssv18330270;dbVar:nssv15151095;dbVar:nssv15150620;dbVar:nssv16596271;dbVar:nssv16254627	10:12829207-135427143;10:46200157-51028871;10:46205691-51330432;10:46205691-51911085;10:46205697-51724915;10:46224447-51594991;10:46225365-51874356;10:46235358-51874163;10:46269494-51874356;10:46284270-51870080;10:46287822-51627470;10:46287822-51861565;10:46476966-51724915;10:46491170-51081560;10:46491170-51594991;10:46491170-51664079;10:46544811-51743471;10:46576516-51680164;10:46964974-51826226;10:46966534-51700837;10:46966534-51874356;10:46966534-51903755;10:46966534-51903756;10:46966535-51700837;10:46966535-51822386;10:46966535-51903756;10:46966536-51874356;10:47132306-51627470	0.50;12.73;12.00;10.78;11.14;11.45;10.88;10.90;10.97;11.01;11.51;11.03;11.72;13.39;12.05;11.89;11.83;12.05;12.65;12.99;12.53;12.45;12.45;12.99;12.66;12.45;12.53;10.20			DDD:32922;dgv221e212;dgv24e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46943378-47742094;10:46966535-48298893	0.1100	DDD:32922;dgv23e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46943378-47742094	0.0260				IMH	10:46257220-51811936	0.0179			10:46416327-47756284 DDD:32922;10:46931463-47389066 DDD:32936;10:46943378-47136996 dgv22e55;10:46966535-48298893 dgv221e212;10:46976293-47023561 1000g;10:46976293-47023561 dgv116e214;10:47007971-47086710 1000g;10:47007971-47086710 dgv117e214;10:47089973-47150813 1000g;10:47089973-47150813 dgv118e214;10:47321000-47396000 gnomAD-SV_v2.1_DUP_10_29724;10:47383858-47395064 1000g;10:47383858-47395064 dgv119e214;10:47394950-47400600 gnomAD-SV_v2.1_DUP_10_29727;10:47424000-47429050 gnomAD-SV_v2.1_DUP_10_29730;10:47531023-47599037 1000g;10:47531764-47597768 TS40:ISCA-46639;10:47537369-47652803 esv2421526;10:47543323-47703613 dgv85n27;10:47565000-47570000 gnomAD-SV_v2.1_DUP_10_29733...	10:46109534-48312291 nsv516485;10:46923704-47138897 DDD:32934;10:46931470-47201116 DDD:32937;10:46943378-47742094 dgv24e55;10:46976293-47023561 1000g;10:46976293-47023561 1000g;10:47007971-47086710 1000g;10:47007971-47086710 1000g;10:47089973-47150813 1000g;10:47089973-47150813 1000g;10:47150450-47160300 gnomAD-SV_v2.1_DUP_10_29721;10:47370500-47380000 gnomAD-SV_v2.1_DUP_10_29725;10:47383858-47395064 1000g;10:47389000-47395000 gnomAD-SV_v2.1_DUP_10_29726;10:47412000-47429100 gnomAD-SV_v2.1_DUP_10_29729;10:47530000-47578125 gnomAD-SV_v2.1_DUP_10_29731;10:47531023-47599037 dgv120e214;10:47534700-47555100 gnomAD-SV_v2.1_DUP_10_29732;10:47539193-47885867 DDD:32970;10:47545737-47759694 DDD:32972...			10:46416327-47756284 DDD:32922;10:46943378-47742094 dgv23e55;chr10:47009185-47009299 dbVar;10:47036095-47036306 IMH;chr10:47083158-47083218 dbVar;10:47083161-47083233 gnomAD-SV_v2.1_DEL_10_109994;chr10:47088385-47088703 dbVar;chr10:47120109-47120186 dbVar;chr10:47148773-47150391 dbVar;10:47148774-47150391 esv3623121;10:47172000-47177000 HI40:ISCA-46432;10:47177700-47182800 HI40:ISCA-46433;10:47191200-47201400 HI40:ISCA-46434;10:47211300-47216400 HI40:ISCA-46435;chr10:47241600-47251000 dbVar;10:47252000-47271150 gnomAD-SV_v2.1_DEL_10_110003;10:47275450-47281000 gnomAD-SV_v2.1_DEL_10_110005;10:47301450-47315100 gnomAD-SV_v2.1_DEL_10_110006;chr10:47531022-47599037 dbVar;10:47531023-47599037 esv3623125...	10:46109534-48312291 nsv516485;10:46931470-47201116 DDD:32937;chr10:47003380-47003486 dbVar;10:47009185-47009299 gnomAD-SV_v2.1_DEL_10_109993;10:47036095-47036306 esv2665191;chr10:47083161-47083233 dbVar;chr10:47088375-47088703 dbVar;10:47088385-47088703 gnomAD-SV_v2.1_DEL_10_109995;chr10:47141536-47141802 dbVar;10:47148774-47150391 1000g;10:47150446-47326492 esv2663732;chr10:47172000-47177000 dbVar;chr10:47177700-47182800 dbVar;chr10:47191200-47201400 dbVar;chr10:47211300-47216400 dbVar;chr10:47252000-47271150 dbVar;chr10:47275450-47281000 dbVar;chr10:47301450-47315100 dbVar;chr10:47383857-47395064 dbVar;10:47531023-47599037 1000g...	0.415	0.500	10:46976181-46976437	LTR78						10:47590101-47594293;10:47590101-47594293								89.5				-2.98697085794417	-2.90416172871297												8	3.3439e-01	2.9629e-04	-1.0	1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2E (cf B_gain_source, +0.00);2L (ANTXRLP1, +0.00);3A (9 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)	1
10_46976158_47590995_DUP_1	10	46976158	47590995	614838	DUP		Benign	NA	split	q11.22	GPRIN2				NM_001385287	1	46992020	47007881	15861	1449	100	no	4	txStart-txEnd	5'UTR-3'UTR			46992020	47007881																										1000g;DDD:32922;DDD:32934;DDD:32936;DDD:32937;dgv116e214;dgv221e212;dgv22e55;dgv24e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46923704-47138897;10:46931463-47389066;10:46931470-47201116;10:46943378-47136996;10:46943378-47742094;10:46966535-48298893;10:46976293-47023561;10:46976293-47023561;10:46976293-47023561;10:46976293-47023561	0.9544	DDD:32922;DDD:32937;dgv23e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094	0.0260				IMH	10:46257220-51811936	0.0179																										82.54				-3.10473776124822	-3.32991530871711					9721	HGNC:23730						8	3.8557e-06	2.9629e-04			full=1
10_46976158_47590995_DUP_1	10	46976158	47590995	614838	DUP		Benign	NA	split	q11.22	NPY4R				NM_001278794	2	47083456	47088320	4864	1128	73	no	2	txStart-txEnd	5'UTR-3'UTR			47083456	47088320																										DDD:32922;DDD:32934;DDD:32936;DDD:32937;dgv221e212;dgv22e55;dgv24e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46923704-47138897;10:46931463-47389066;10:46931470-47201116;10:46943378-47136996;10:46943378-47742094;10:46966535-48298893	0.1100	DDD:32922;DDD:32937;dgv23e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094	0.0260				IMH	10:46257220-51811936	0.0179																										66.73				-2.98697085794417	-2.90416172871297					5540	HGNC:9329						8	8.2144e-07	6.1160e-09			full=1
10_46976158_47590995_DUP_1	10	46976158	47590995	614838	DUP		Benign	NA	split	q11.22	LINC00842				NR_033957	2	47096453	47151400	54947	0	0	NA	4	txStart-txEnd	UTR			47096453	47151400																										DDD:32922;DDD:32936;DDD:32937;dgv221e212;dgv24e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46931463-47389066;10:46931470-47201116;10:46943378-47742094;10:46966535-48298893	0.1100	DDD:32922;DDD:32937;dgv23e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094	0.0260				IMH	10:46257220-51811936	0.0179																																				643650	HGNC:44989											full=1
10_46976158_47590995_DUP_1	10	46976158	47590995	614838	DUP		Benign	NA	split	q11.22	HNRNPA1P33				NR_003277	2	47133334	47133898	564	0	0	NA	1	txStart-txEnd	UTR			47133334	47133898																										1000g;DDD:32922;DDD:32934;DDD:32936;DDD:32937;dgv118e214;dgv221e212;dgv22e55;dgv24e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46923704-47138897;10:46931463-47389066;10:46931470-47201116;10:46943378-47136996;10:46943378-47742094;10:46966535-48298893;10:47089973-47150813;10:47089973-47150813;10:47089973-47150813;10:47089973-47150813	0.9544	DDD:32922;DDD:32937;dgv23e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094	0.0260				IMH	10:46257220-51811936	0.0179																																				728643	HGNC:44990											full=1
10_46976158_47590995_DUP_1	10	46976158	47590995	614838	DUP		Benign	NA	split	q11.22	ANXA8L1				NM_001098845	3	47157988	47173994	16006	984	100	no	12	txStart-txEnd	5'UTR-3'UTR			47157988	47173994																										DDD:32922;DDD:32936;DDD:32937;dgv221e212;dgv24e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46931463-47389066;10:46931470-47201116;10:46943378-47742094;10:46966535-48298893	0.1100	DDD:32922;DDD:32937;dgv23e55;esv2663732;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094;10:47150446-47326492	0.0400				IMH	10:46257220-51811936	0.0179																										75.66										728113	HGNC:23334						9	3.3439e-01				full=1
10_46976158_47590995_DUP_1	10	46976158	47590995	614838	DUP		Benign	NA	split	q11.22	FAM25BP				NR_104039	1	47177206	47181688	4482	0	0	NA	3	txStart-txEnd	UTR			47177206	47181688																										DDD:32922;DDD:32936;DDD:32937;dgv221e212;dgv24e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46931463-47389066;10:46931470-47201116;10:46943378-47742094;10:46966535-48298893	0.1100	DDD:32922;DDD:32937;dgv23e55;esv2663732;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094;10:47150446-47326492	0.0400				IMH	10:46257220-51811936	0.0179																										89.5										100132929	HGNC:23584											full=1
10_46976158_47590995_DUP_1	10	46976158	47590995	614838	DUP		Benign	NA	split	q11.22	AGAP14P				NR_165820	1	47192907	47213477	20570	0	0	NA	8	txStart-txEnd	UTR			47192907	47213477																										DDD:32922;DDD:32936;dgv221e212;dgv24e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46931463-47389066;10:46943378-47742094;10:46966535-48298893	0.1100	DDD:32922;dgv23e55;esv2663732;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46943378-47742094;10:47150446-47326492	0.0400				IMH	10:46257220-51811936	0.0179																																				653259	HGNC:23660											full=1
10_46976158_47590995_DUP_1	10	46976158	47590995	614838	DUP		Benign	NA	split	q11.22	SHLD2P3				NR_027634	1	47379719	47421238	41519	0	0	NA	7	txStart-txEnd	UTR			47379719	47421238																										DDD:32922;dgv221e212;dgv24e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46943378-47742094;10:46966535-48298893	0.1100	DDD:32922;dgv23e55;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46943378-47742094	0.0260				IMH	10:46257220-51811936	0.0179																																				439965	HGNC:34038											full=1
10_46976158_47590995_DUP_1	10	46976158	47590995	614838	DUP		Benign	NA	split	q11.22	ANTXRLP1				NR_103827	1	47590260	47640844	735	0	0	NA	5	intron4-txEnd	UTR	53	3'	47590260	47590995																										1000g;DDD:32922;DDD:32970;DDD:32972;TS40:ISCA-46639;dgv120e214;dgv221e212;dgv24e55;dgv85n27;esv2421526;gnomAD-SV_v2.1_DUP_10_29734;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46943378-47742094;10:46966535-48298893;10:47531023-47599037;10:47531023-47599037;10:47531764-47597768;10:47537369-47652803;10:47539193-47885867;10:47543323-47703613;10:47545737-47759694;10:47585775-47727500	0.1100	1000g;DDD:32922;dbVar;dgv23e55;esv2421526;esv3623125;gnomAD-SV_v2.1_DEL_10_110010;nsv516485	10:46109534-48312291;10:46416327-47756284;10:46943378-47742094;chr10:47531022-47599037;10:47531023-47599037;10:47531023-47599037;10:47537369-47652803;chr10:47582000-47654100;10:47582000-47654100;chr10:47585000-47706000	0.0318				IMH	10:46257220-51811936	0.0179																																				100996567	HGNC:45004											full=1
14_22323880_22952279_DEL_1	14	22323880	22952279	-628400	DEL		Benign	NA	full	q11.2	TRD-AS1	OR4E1	LINC02332	1																CHD8 (HI=3/morbid/RE=GH_enhancer+GH_promoter_enhancer);MMP14 (morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer);PABPN1 (morbid/RE=GH_enhancer+GH_promoter_enhancer);SLC7A7 (morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer);SUPT16H (morbid/RE=GH_enhancer+GH_promoter_enhancer)															dbVar:nssv15162475;dbVar:nssv15606090;dbVar:nssv15161908;dbVar:nssv15162476;dbVar:nssv15161629;dbVar:nssv15139565;dbVar:nssv15141262;dbVar:nssv15146564;dbVar:nssv15146758;dbVar:nssv16207193;dbVar:nssv17976958;dbVar:nssv15148269;dbVar:nssv15161107;nssv15161424;dbVar:nssv15161067;dbVar:nssv15132618;dbVar:nssv15134537;dbVar:nssv17955846;dbVar:nssv16091748	14:19000423-107289053;14:19100683-28730087;14:19280734-107287663;14:19327824-107287663;14:19794562-107234280;14:19794562-27768254;14:19794562-34049214;14:20468771-39453619;14:20490853-44562875;14:20511673-44829030;14:20511673-47481203;14:20511673-49111245;14:20511674-107285437;14:20619309-107263478;14:20619309-23911404;14:20880747-25487326;14:20925966-23649548;14:21717094-24027220	0.71;6.53;0.71;0.71;0.72;7.88;4.41;3.31;2.61;2.58;2.33;2.20;0.72;0.73;19.09;13.64;23.07;27.20			dbVar:nssv15119819;dbVar:nssv15145699;dbVar:nssv18330314;dbVar:nssv16208379;dbVar:nssv17976070	14:20223409-23210490;14:20665105-45754005;14:20690197-23114522;14:21143934-23297667;14:21162264-50713602	21.04;2.50;25.92;29.18;2.13			TS40:ISCA-37476	14:22111110-23021097		HI40:ISCA-37476	14:22111110-23021097										14:22420175-22995788 dgv594e212;14:22824113-22824253 IMH	14:22111110-23021097 TS40:ISCA-37476;14:22558879-22977816 dgv598e212			chr14:22203999-22380000 dbVar;chr14:22377253-22379001 dbVar;chr14:22386251-22387140 dbVar;chr14:22401118-22401214 dbVar;chr14:22451362-22451480 dbVar;14:22506096-22519924 dgv596e212;chr14:22522033-22522131 dbVar;chr14:22557093-22558668 dbVar;chr14:22566919-22569163 dbVar;chr14:22578988-22580660 dbVar;chr14:22582707-22583756 dbVar;14:22582708-22583756 DDD:42194;14:22582708-22583756 esv2663069;chr14:22592792-22593350 dbVar;chr14:22621082-22623586 dbVar;chr14:22650745-22651552 dbVar;chr14:22690248-22693574 dbVar;14:22740309-22923239 esv3633740;chr14:22753195-22755692 dbVar;chr14:22763326-22765409 dbVar...	14:22111110-23021097 HI40:ISCA-37476;chr14:22375089-22375885 dbVar;chr14:22381501-22381559 dbVar;chr14:22392130-22392542 dbVar;chr14:22414330-22458520 dbVar;chr14:22501037-22503623 dbVar;chr14:22520154-22520348 dbVar;14:22549070-22959340 DDD:42190;14:22558879-22995788 dgv599e212;chr14:22570896-22575554 dbVar;chr14:22582165-22583029 dbVar;14:22582707-22583756 gnomAD-SV_v2.1_DEL_14_140471;14:22582708-22583756 IMH;14:22582714-22583762 esv3633739;chr14:22602805-22607184 dbVar;chr14:22629626-22629708 dbVar;chr14:22667031-22667110 dbVar;chr14:22731881-22732433 dbVar;chr14:22740393-22749648 dbVar;chr14:22760947-22761344 dbVar...	0.250	0.390																																				-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)	1
14_22323880_22952279_DEL_1	14	22323880	22952279	-628400	DEL		Benign	NA	split	q11.2	TRD-AS1				NR_148361	1	22847807	22951948	104141	0	0	NA	5	txStart-txEnd	UTR			22847807	22951948																										TS40:ISCA-37476;dgv594e212;dgv598e212	14:22111110-23021097;14:22420175-22995788;14:22558879-22977816	0.0200	DDD:42190;HI40:ISCA-37476;dgv599e212	14:22111110-23021097;14:22549070-22959340;14:22558879-22995788	0.0107																																										105370401	HGNC:56197											full=1
14_74001652_74022324_DEL_1	14	74001652	74022324	-20673	DEL		Benign	NA	full	q24.3	HEATR4;ACOT1	RIOX1	ACOT2	2																COQ6 (morbid/RE=EA_enhancer);ISCA2 (morbid/RE=GH_enhancer);PSEN1 (morbid/RE=EA_enhancer)															dbVar:nssv15162475;dbVar:nssv15161908;dbVar:nssv15162476;dbVar:nssv15161629;dbVar:nssv15161107;nssv15161424;dbVar:nssv15161067;dbVar:nssv17976728;dbVar:nssv17517489;dbVar:nssv15161689	14:19000423-107289053;14:19280734-107287663;14:19327824-107287663;14:19794562-107234280;14:20511674-107285437;14:20619309-107263478;14:37671059-106985955;14:54654002-75828024;14:73750742-107285437	0.02;0.02;0.02;0.02;0.02;0.02;0.03;0.10;0.06			dbVar:nssv15161064;dbVar:nssv8639619;dbVar:nssv15161370	14:70028817-82441728;14:73152116-77698582;14:73809922-79301402	0.17;0.45;0.38			DDD:43163;dgv655e212;dgv657e212	14:73995762-74031034;14:73998504-74050492;14:74001111-74024031	0.1799	1000g;DDD:43161;DDD:43163;dbVar;dgv401e199;dgv654e212;esv2421969;esv3634909	14:73995762-74031034;14:73996446-74025592;14:73997052-74024450;chr14:73997195-74024603;14:73997196-74024603;14:73997196-74024603;14:73998504-74050492;14:73998977-74028117	0.8135				IMH	14:34547844-76392174	0.0264			14:73998504-74050492 DDD:43163;14:74001655-74002844 DDD:43168;14:74007603-74039880 IMH;14:74007864-74040335 IMH;14:74008288-74008463 nsv514748;14:74011084-74024007 1000g;14:74011084-74024007 dgv407e214;	14:73995762-74031034 dgv655e212;14:74001111-74024031 dgv657e212;14:74001655-74004589 DDD:43169;14:74007816-74040003 IMH;14:74007919-74039902 gnomAD-SV_v2.1_DUP_14_38740;14:74010621-74023183 DDD:43174;14:74011084-74024007 1000g;14:74020544-74030798 DDD:43176			14:73996446-74025592 dgv401e199;chr14:73997195-74024603 dbVar;14:73997196-74024603 esv3634909;14:73998977-74028117 esv2421969;14:74002704-74003063 nsv514747;14:74006839-74031034 dgv661e212;14:74010064-74012567 nsv514749;14:74011084-74024007 1000g;chr14:74019700-74051250 dbVar;	14:73995762-74031034 dgv654e212;14:73997052-74024450 DDD:43161;14:73997196-74024603 1000g;14:73998504-74050492 DDD:43163;14:74001124-74020979 DDD:43165;14:74006839-74024031 dgv660e212;14:74006971-74038879 esv2672436;chr14:74011083-74024007 dbVar;14:74011084-74024007 esv3634910;14:74022142-74045835 DDD:43178	0.420	0.380	14:74001513-74001649;14:74001714-74002042	FLAM_A;L1ME4a	14:74021756-74022225	L1M1			14:74000099-74020296									85.75				2.96959666946894	4.05533207481267												6	6.4141e-05	3.5999e-02	-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (2 genes, +0.00);5F (+0.00)	1
14_74001652_74022324_DEL_1	14	74001652	74022324	-20673	DEL		Benign	NA	split	q24.3	HEATR4				NM_001220484	1	73945188	74025651	20673	0	0	NA	18	intron1-intron1	5'UTR	3130	5'	74001651	74022324																										DDD:43163;dgv655e212;dgv657e212	14:73995762-74031034;14:73998504-74050492;14:74001111-74024031	0.1799	1000g;DDD:43161;DDD:43163;dbVar;dgv401e199;dgv654e212;esv2421969;esv3634909	14:73995762-74031034;14:73996446-74025592;14:73997052-74024450;chr14:73997195-74024603;14:73997196-74024603;14:73997196-74024603;14:73998504-74050492;14:73998977-74028117	0.8135				IMH	14:34547844-76392174	0.0264																										85.75				-0.328810289068687	-0.503765753071617					399671	HGNC:16761						6	1.3711e-29	6.2323e-17			full=1
14_74001652_74022324_DEL_1	14	74001652	74022324	-20673	DEL		Benign	NA	split	q24.3	ACOT1				NM_001037161	2	74003846	74010500	6654	1266	100	no	3	txStart-txEnd	5'UTR-3'UTR			74003846	74010500																										DDD:43163;dgv655e212;dgv657e212	14:73995762-74031034;14:73998504-74050492;14:74001111-74024031	0.1799	1000g;DDD:43161;DDD:43163;DDD:43165;dbVar;dgv401e199;dgv654e212;esv2421969;esv3634909	14:73995762-74031034;14:73996446-74025592;14:73997052-74024450;chr14:73997195-74024603;14:73997196-74024603;14:73997196-74024603;14:73998504-74050492;14:73998977-74028117;14:74001124-74020979	0.8135				IMH	14:34547844-76392174	0.0264																										79.11				2.96959666946894	4.05533207481267					641371	HGNC:33128						8	6.4141e-05	3.5999e-02			full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	full	q11.1-q11.2	CHEK2P2;HERC2P3;GOLGA6L6;GOLGA8CP;NBEAP1;MIR3118-2;POTEB2;MIR5701-1;LINC01193;FAM30C;LOC646214;CXADRP2;POTEB;NF1P2;LINC02203;OR4M2-OT1;OR4M2;OR4N4;OR4N3P;IGHV1OR15-1;IGHV1OR15-3;MIR1268A;REREP3;MIR4509-1;GOLGA8DP;GOLGA6L1		TUBGCP5	26																ADAM22 (morbid/RE=mTL_miRNA);AGO2 (morbid/RE=mTL_miRNA);AIP (morbid/RE=mTL_miRNA);BLOC1S3 (morbid/RE=mTL_miRNA);CA12 (morbid/RE=mTL_miRNA);CACNA1H (morbid/RE=mTL_miRNA);CAMK2G (morbid/RE=mTL_miRNA);CDKN1B (HI=3/morbid/RE=mTL_miRNA);CERS1 (morbid/RE=mTL_miRNA);DHCR7 (morbid/RE=mTL_miRNA);DICER1 (HI=3/morbid/RE=mTL_miRNA);EDAR (morbid/RE=mTL_miRNA);EGLN1 (morbid/RE=mTL_miRNA);EPB41 (morbid/RE=mTL_miRNA);EPHA2 (morbid/RE=mTL_miRNA);ERBB3 (morbid/RE=mTL_miRNA);FRMPD4 (morbid/RE=mTL_miRNA);GABRB2 (morbid/RE=mTL_miRNA);GATA6 (HI=3/morbid/RE=mTL_miRNA);GCK (morbid/RE=mTL_miRNA);HPRT1 (HI=3/morbid/RE=mTL_miRNA);HRAS (morbid/RE=mTL_miRNA);HSPD1 (morbid/RE=mTL_miRNA);IL6ST (morbid/RE=mTL_miRNA);INF2 (morbid/RE=mTL_miRNA);ISCU (morbid/RE=mTL_miRNA);KAT6B (HI=3/morbid/RE=mTL_miRNA);KCNJ10 (morbid/RE=mTL_miRNA);KIF23 (morbid/RE=mTL_miRNA);KLHL3 (morbid/RE=mTL_miRNA);KMT2D (HI=3/morbid/RE=mTL_miRNA);LRIG2 (morbid/RE=mTL_miRNA);MAGEL2 (morbid/RE=ABC_enhancer);MAPK1 (morbid/RE=mTL_miRNA);MAPKAPK5 (morbid/RE=mTL_miRNA);MKRN3 (morbid/RE=ABC_enhancer);NDUFS1 (morbid/RE=mTL_miRNA);NEK9 (morbid/RE=mTL_miRNA);NIPA1 (morbid/RE=ABC_enhancer);NPM1 (morbid/RE=mTL_miRNA);ORAI1 (morbid/RE=mTL_miRNA);PEX26 (morbid/RE=mTL_miRNA);PHF12 (HI=3/RE=mTL_miRNA);PIGP (morbid/RE=mTL_miRNA);POT1 (morbid/RE=mTL_miRNA);PRKCA (morbid/RE=mTL_miRNA);PRLR (morbid/RE=mTL_miRNA);PURA (HI=3/morbid/RE=mTL_miRNA);RAC3 (morbid/RE=mTL_miRNA);SCN1A (HI=3/morbid/RE=mTL_miRNA)...															dbVar:nssv15172447;dbVar:nssv15149081;dbVar:nssv15148902;dbVar:nssv15125410;dbVar:nssv15127689;dbVar:nssv15127462;dbVar:nssv15126524;dbVar:nssv15124656;dbVar:nssv15127659;dbVar:nssv15126021;dbVar:nssv15172190;dbVar:nssv15150569;dbVar:nssv15147052;dbVar:nssv15145742;dbVar:nssv15147053;dbVar:nssv15175556;dbVar:nssv15145744;dbVar:nssv15774514;dbVar:nssv15148785;dbVar:nssv15605894;dbVar:nssv15149135;dbVar:nssv15148575;dbVar:nssv15147687;dbVar:nssv15605895;dbVar:nssv15147058;dbVar:nssv15145747;dbVar:nssv15146452;dbVar:nssv15149084;dbVar:nssv15147355;dbVar:nssv15149616;dbVar:nssv15147801;dbVar:nssv15146958;dbVar:nssv15149124;dbVar:nssv15123304;dbVar:nssv15147513;dbVar:nssv15127079;dbVar:nssv15605897;dbVar:nssv15605899;dbVar:nssv15125414;dbVar:nssv15148135;dbVar:nssv15146406;dbVar:nssv15148053;dbVar:nssv15145661;nssv15146195;dbVar:nssv15145807;dbVar:nssv15147309;dbVar:nssv15145805;nssv15146672;dbVar:nssv15145677;dbVar:nssv18841879;dbVar:nssv16207640;dbVar:nssv16215281;dbVar:nssv15755702;dbVar:nssv15145809;nssv15150756;dbVar:nssv15145849;dbVar:nssv15146718;dbVar:nssv15148834;dbVar:nssv15147450;nssv15148847;dbVar:nssv15146035;dbVar:nssv15148907;dbVar:nssv15146735;dbVar:nssv15148824;dbVar:nssv15146042;dbVar:nssv15147411;dbVar:nssv15147985;dbVar:nssv15148007;dbVar:nssv15146680;dbVar:nssv15147424;dbVar:nssv15148131;dbVar:nssv15145909	15:20016812-102493540;15:20044343-28924405;15:20045835-32914140;15:20063341-102521392;15:20063341-29093456;15:20063341-29209620;15:20063341-30448351;15:20063341-32439302;15:20063341-32942613;15:20063341-32986584;15:20071674-102461162;15:20071674-30737344;15:20085003-28947309;15:20085003-29210720;15:20085004-28178425;15:20102541-29031690;15:20110723-28408897;15:20179528-32998070;15:20190549-28406650;15:20190549-30300265;15:20190549-32386089;15:20190549-32917801;15:20190549-32917857;15:20191653-28525310;15:20207714-30641396;15:20207714-32413623;15:20251769-28631040;15:20306550-26208861;15:20686197-30509384;15:20733396-102511616;15:20733396-28406650;15:20733396-28406709;15:20848461-27662530;15:21129985-28535266;15:22304597-28577787;15:22318645-29209620;15:22382861-32396457;15:22383300-32917689;15:22409402-28952953;15:22652061-28883749;15:22669053-28435888;15:22698523-28940098;15:22698523-29030517;15:22698523-29085896;15:22698523-30366124;15:22698523-30653936;15:22698523-32899558;15:22742397-28567325;15:22750306-23114374;15:22750306-23164315;15:22750306-23226254;15:22765629-28520313;15:22765629-28557186;15:22765629-28559402;15:22765629-28912057;15:22765629-29006852;15:22765629-29085896;15:22765629-29096442;15:22765629-30366124;15:22765629-30653936;15:22765629-30819509;15:22765629-38837526;15:22765638-28520316;15:22765638-29085888;15:22765638-30366079;15:22765638-31467435;15:22765638-32509932;15:22765638-32899558	2.83;26.27;18.13;2.83;25.83;25.51;22.46;18.85;18.11;18.05;2.83;21.87;26.32;25.56;28.82;26.13;28.11;18.20;28.39;23.08;19.13;18.33;18.33;27.99;22.36;19.11;27.84;39.52;21.17;2.49;26.49;26.49;28.14;22.09;7.35;6.49;3.82;3.63;5.44;1.82;1.68;1.08;1.06;1.05;0.88;0.84;0.66;0.40;4.23;3.72;3.23;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dbVar:nssv16865885;dbVar:nssv18326337;dbVar:nssv15605896;dbVar:nssv15123310;dbVar:nssv18841918;dbVar:nssv16208656;dbVar:nssv18792791;dbVar:nssv16215320;dbVar:nssv15147060;dbVar:nssv15146946;dbVar:nssv15147062;dbVar:nssv15153078;dbVar:nssv18792767;dbVar:nssv15160814;dbVar:nssv15160813;dbVar:nssv15159751;dbVar:nssv15160812;dbVar:nssv16216734;dbVar:nssv16297059;dbVar:nssv15147987;dbVar:nssv16215225;dbVar:nssv16208660;dbVar:nssv15160288;dbVar:nssv15146407;dbVar:nssv15145750;dbVar:nssv16297060;dbVar:nssv15149692;dbVar:nssv15147712;dbVar:nssv15145753;dbVar:nssv15147316;dbVar:nssv15145752;nssv15148282;dbVar:nssv15146196;nssv15146797;dbVar:nssv15146673;dbVar:nssv15147319;dbVar:nssv18326338;dbVar:nssv17955873;dbVar:nssv18842037;dbVar:nssv15145025;dbVar:nssv15145441;dbVar:nssv15145201;dbVar:nssv17517455;dbVar:nssv16297061;dbVar:nssv16208668;dbVar:nssv15129123;dbVar:nssv16215325;dbVar:nssv15130100;dbVar:nssv16209033;dbVar:nssv15172201;dbVar:nssv15606130;dbVar:nssv15132915;nssv16736610;dbVar:nssv16736624;nssv16736646;dbVar:nssv16091751;dbVar:nssv15130140;dbVar:nssv15146040;dbVar:nssv15148147;dbVar:nssv15146043;dbVar:nssv15145953;dbVar:nssv15148915;dbVar:nssv15148857;dbVar:nssv15146645	15:20612841-23272733;15:20739498-28566579;15:20848751-32925141;15:21129985-32514926;15:21172301-26208861;15:21903816-23272733;15:22070541-23262343;15:22299435-23226254;15:22318598-28940098;15:22427967-23226254;15:22432629-30641396;15:22503622-23091180;15:22646195-23174919;15:22646195-23191269;15:22646195-23199953;15:22646195-23302626;15:22646195-23428906;15:22646693-28964445;15:22646800-23301267;15:22652048-28705151;15:22652331-23226254;15:22652331-23272733;15:22652331-29050198;15:22669053-28435888;15:22669053-30401486;15:22695843-23300942;15:22698523-28406650;15:22698523-28406709;15:22698523-28520313;15:22698523-28557186;15:22698523-28691460;15:22698523-29030517;15:22698523-29085896;15:22698523-38381783;15:22736247-23265381;15:22743128-23246000;15:22744150-23246340;15:22746945-23102836;15:22746945-23121448;15:22746945-23199421;15:22746949-23323445;15:22749636-23301317;15:22750306-23109890;15:22750306-23164315;15:22750306-23222284;15:22750306-23226254;15:22750306-23272733;15:22750306-28535266;15:22751195-23251194;15:22765629-23085096;15:22765629-23191062;15:22765629-23217514;15:22765629-23300287;15:22765629-28559402;15:22765629-28691460;15:22765629-28912057;15:22765629-28940098;15:22765629-28976193;15:22765629-32676855;15:22765638-29085888	80.94;25.89;15.87;14.37;31.64;62.96;58.33;50.31;6.75;42.31;4.06;44.60;22.60;21.92;21.58;18.20;15.27;1.88;18.17;1.88;19.75;18.27;1.77;1.68;1.25;11.54;1.18;1.18;1.15;1.15;1.12;1.06;1.05;0.43;5.56;4.49;4.29;5.27;5.00;4.14;3.25;2.91;4.28;3.72;3.26;3.23;2.94;0.27;2.90;0.02;0.01;0.01;0.01;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dgv40e203;dgv93e55	15:20016329-23487546;15:20167087-22869764	0.1500	dgv40e203;dgv94e55	15:20016329-23487546;15:20167087-23222284	0.1000									15:20037886-21236662 DDD:43986;15:20167087-21200251 dgv91e55;15:20167087-22869764 dgv93e55;15:20203950-22588019 dgv2191n100;15:20550641-20637800 nsv514762;15:20575412-20599635 DDD:44041;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20650251-20710056 nsv514763;15:20717000-20724000 gnomAD-SV_v2.1_DUP_15_39413;15:20749534-20773538 DDD:44053;15:20779661-20885221 DDD:44055;15:20786000-20827000 gnomAD-SV_v2.1_DUP_15_39420;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20935077-20960284 nsv514764;15:21069662-21311925 DDD:44068;15:21153622-21170901 nsv514766...	15:20016329-23487546 dgv40e203;15:20144627-21266621 DDD:43992;15:20167087-22588036 dgv92e55;15:20182203-22608281 DDD:44001;15:20388742-22207639 TS40:ISCA-46686;15:20556528-20624827 DDD:44039;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 dgv430e214;15:20686000-20711550 gnomAD-SV_v2.1_DUP_15_39411;15:20746872-20747023 DDD:44052;15:20751226-21293606 esv3892595;15:20783000-20799000 gnomAD-SV_v2.1_DUP_15_39419;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 dgv431e214;15:21040437-21077011 nsv514765;15:21145102-21164300 TS40:ISCA-46688...			15:20144627-21266621 DDD:43992;15:20167090-22588036 dgv96e55;15:20396654-20496584 DDD:44013;15:20468142-20468256 DDD:44028;15:20547692-20548186 IMH;15:20575412-20599635 DDD:44041;15:20581464-20589613 esv2674516;15:20587419-20587601 gnomAD-SV_v2.1_DEL_15_145824;15:20698000-20706500 gnomAD-SV_v2.1_DEL_15_145825;chr15:20729175-20745525 dbVar;15:20749534-20773538 DDD:44053;chr15:20781000-20811000 dbVar;chr15:20820627-20821162 dbVar;chr15:20820696-20820748 dbVar;chr15:20891428-20891785 dbVar;chr15:20976350-20994050 dbVar;15:21042050-21056300 HI40:ISCA-46469;15:21042050-21056300 gnomAD-SV_v2.1_DEL_15_145837;chr15:21200932-21201488 dbVar;15:21321039-21325126 DDD:44088...	15:20016329-23487546 dgv40e203;15:20167087-23222284 dgv94e55;15:20182203-22608281 DDD:44001;chr15:20436850-20437443 dbVar;chr15:20511834-20511893 dbVar;15:20556528-20624827 DDD:44039;15:20581414-20589751 IMH;chr15:20587419-20587601 dbVar;chr15:20698000-20706500 dbVar;15:20729175-20745525 HI40:ISCA-46468;chr15:20732300-20738500 dbVar;15:20779661-20885221 DDD:44055;chr15:20806100-20823500 dbVar;15:20820627-20821162 gnomAD-SV_v2.1_DEL_15_145830;chr15:20881220-20881325 dbVar;15:20945597-20946011 esv2664547;chr15:21017763-21017994 dbVar;chr15:21042050-21056300 dbVar;15:21069662-21311925 DDD:44068;chr15:21282800-21314300 dbVar...	0.380	0.455			15:22765220-22765620;15:22765771-22766019	L1MC4;L2			15:20345908-20498625;15:20390971-20432871	15:22754054-22770109	15:20200401-22365100	High Signal Region						93.81				2.22375841006203	2.58284576037233												8	3.5277e-01	5.7189e-01	-1.0	1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);3A (26 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)	1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.1	CHEK2P2				NR_038836	1	20487996	20496811	8815	0	0	NA	6	txStart-txEnd	UTR			20487996	20496811																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																										646096	HGNC:43578											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.1-q11.2	HERC2P3				NR_036432	1	20613648	20711433	97785	0	0	NA	26	txStart-txEnd	UTR			20613648	20711433																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																										283755	HGNC:4871											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	GOLGA6L6				NM_001145004	2	20737093	20747114	10021	2175	100	no	11	txStart-txEnd	5'UTR-3'UTR			20737093	20747114																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																93.81				0.630577750419089	0.0606178603183018					727832	HGNC:37225						8	2.2875e-19	8.6864e-02			full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	GOLGA8CP				NR_027411	2	20767673	20781026	13353	0	0	NA	18	txStart-txEnd	UTR			20767673	20781026																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																										729786	HGNC:32375											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	NBEAP1				NR_027992	1	20874796	20961480	86684	0	0	NA	3	txStart-txEnd	UTR			20874796	20961480																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																										606	HGNC:1007											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	MIR3118-2				NR_036062	2	21038123	21038198	75	0	0	NA	1	txStart-txEnd	UTR			21038123	21038198																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																										100422949	HGNC:38324											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	POTEB2				NM_001277303	1	21040700	21071643	30943	1635	100	no	11	txStart-txEnd	5'UTR-3'UTR			21040700	21071643																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595;nsv514765	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606;15:21040437-21077011	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																92.58				2.22375841006203	2.58284576037233					100287399	HGNC:48327						8	4.2457e-02	5.7189e-01			full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	MIR5701-1				NR_049886	1	21145580	21145662	82	0	0	NA	1	txStart-txEnd	UTR			21145580	21145662																										DDD:43986;DDD:43992;DDD:44001;DDD:44068;TS40:ISCA-46686;TS40:ISCA-46688;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606;15:21069662-21311925;15:21145102-21164300	0.3900	DDD:43992;DDD:44001;DDD:44068;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21069662-21311925	0.2710																																										100847060	HGNC:43522											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	LINC01193				NR_040094	1	21145766	21198633	52867	0	0	NA	5	txStart-txEnd	UTR			21145766	21198633																										DDD:43986;DDD:43992;DDD:44001;DDD:44068;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606;15:21069662-21311925	0.3900	DDD:43992;DDD:44001;DDD:44068;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21069662-21311925	0.2710																																										348120	HGNC:28003											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	FAM30C				NR_145444	1	21208605	21255165	46560	0	0	NA	4	txStart-txEnd	UTR			21208605	21255165																										DDD:43992;DDD:44001;DDD:44068;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20144627-21266621;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606;15:21069662-21311925	0.3900	DDD:43992;DDD:44001;DDD:44068;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21069662-21311925	0.2710																																										654499	HGNC:31024											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	LOC646214				NR_027053	2	21932513	21940739	8226	0	0	NA	1	txStart-txEnd	UTR			21932513	21940739																										DDD:44001;DDD:44096;DDD:44097;DDD:44098;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:21399090-22661412;15:21904679-21949433;15:21906623-22142846	0.3900	DDD:44001;DDD:44096;DDD:44097;DDD:44098;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:21904679-21949433;15:21906623-22142846	0.1300																																																						full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	CXADRP2				NR_024387	1	22014402	22016878	2476	0	0	NA	1	txStart-txEnd	UTR			22014402	22016878																										DDD:44001;DDD:44096;DDD:44098;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:21399090-22661412;15:21906623-22142846	0.3900	DDD:44001;DDD:44096;DDD:44098;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:21906623-22142846	0.1300																																										646243	HGNC:33973											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	POTEB				NM_001277304	2	22051852	22083259	31407	1635	100	no	11	txStart-txEnd	5'UTR-3'UTR			22051852	22083259																										DDD:44001;DDD:44096;DDD:44098;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:21399090-22661412;15:21906623-22142846	0.3900	DDD:44001;DDD:44096;DDD:44098;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:21906623-22142846	0.1300																																91.86										100996331	HGNC:33734						9	3.5277e-01				full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	NF1P2				NR_028506	2	22133180	22145802	12622	0	0	NA	8	txStart-txEnd	UTR			22133180	22145802																										DDD:44001;DDD:44096;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:21399090-22661412	0.3900	DDD:44001;DDD:44096;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412	0.1300																																										440225	HGNC:38664											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	LINC02203				NR_152818	1	22195582	22199978	4396	0	0	NA	3	txStart-txEnd	UTR			22195582	22199978																										DDD:44001;DDD:44096;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:21399090-22661412	0.3900	DDD:44001;DDD:44096;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412	0.1300																																										727924	HGNC:53069											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	OR4M2-OT1				NR_110480	1	22278030	22383564	105534	0	0	NA	9	txStart-txEnd	UTR			22278030	22383564																										DDD:44001;DDD:44096;dgv2191n100;dgv3e224;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752	0.3900	DDD:44001;DDD:44096;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412	0.1300																																										101927079	HGNC:56199											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	OR4M2				NM_001004719	2	22368477	22369561	1084	942	95	no	1	txStart-txEnd	5'UTR-3'UTR			22368477	22369561																										1000g;DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44114;DDD:44119;dgv2191n100;dgv3e224;dgv40e203;dgv435e214;dgv92e55;dgv93e55;nsv514767	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22343966-22372302;15:22343966-22372302;15:22343966-22372302;15:22343966-22372302;15:22343966-22372302;15:22343966-22372302;15:22360686-22387071	0.4271	DDD:44001;DDD:44096;DDD:44113;DDD:44114;DDD:44119;dbVar;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22320058-22588019;chr15:22343965-22372302;15:22360686-22387071	0.1300																																76.23										390538	HGNC:15373						9	3.9447e-08				full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	OR4N4				NM_001005241	4	22382472	22383813	1341	951	100	no	1	txStart-txEnd	5'UTR-3'UTR			22382472	22383813																										DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44114;DDD:44119;dgv2191n100;dgv3e224;dgv40e203;dgv92e55;dgv93e55;nsv514767	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22360686-22387071	0.4271	DDD:44001;DDD:44096;DDD:44113;DDD:44114;DDD:44119;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22320058-22588019;15:22360686-22387071	0.1300																																75.33				-0.271906921498889	-0.565772314050669					283694	HGNC:15375						9	5.1332e-05	1.8051e-02			full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	OR4N3P				NR_028067	1	22413461	22414398	937	0	0	NA	1	txStart-txEnd	UTR			22413461	22414398																										1000g;DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44114;DDD:44129;dgv2191n100;dgv3e224;dgv40e203;dgv437e214;dgv92e55;dgv93e55;nsv514767	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22383478-22434169;15:22383478-22434169;15:22383478-22434169;15:22383478-22434169;15:22383478-22434169;15:22411349-22577661	0.4271	DDD:44001;DDD:44096;DDD:44113;DDD:44114;DDD:44129;dbVar;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22320058-22588019;chr15:22383477-22434169;15:22411349-22577661	0.1300																																										390539	HGNC:15374											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	IGHV1OR15-1				NR_135694	1	22448239	22448881	642	0	0	NA	2	txStart-txEnd	UTR			22448239	22448881																										1000g;DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44114;DDD:44129;dgv2191n100;dgv3e224;dgv40e203;dgv438e214;dgv92e55;dgv93e55;nsv514767	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22411349-22577661;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103	0.4271	DDD:44001;DDD:44096;DDD:44113;DDD:44114;DDD:44129;dbVar;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22320058-22588019;15:22411349-22577661;chr15:22446739-22506103	0.1300																																										388077	HGNC:5563											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	IGHV1OR15-3				NR_135666	1	22465805	22466547	742	0	0	NA	2	txStart-txEnd	UTR			22465805	22466547																										1000g;DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44129;dgv2191n100;dgv3e224;dgv40e203;dgv438e214;dgv92e55;dgv93e55;nsv514767	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22411349-22577661;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103	0.4271	DDD:44001;DDD:44096;DDD:44113;DDD:44129;dbVar;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22320058-22588019;15:22411349-22577661;chr15:22446739-22506103	0.1300																																										646370	HGNC:5565											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	MIR1268A				NR_031672	1	22513228	22513280	52	0	0	NA	1	txStart-txEnd	UTR			22513228	22513280																										DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44129;dgv2191n100;dgv3e224;dgv40e203;dgv92e55;dgv93e55;nsv514767	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22411349-22577661	0.4271	DDD:44001;DDD:44096;DDD:44113;DDD:44129;DDD:44139;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22320058-22588019;15:22411349-22577661;15:22475646-22537915	0.1300																																										100302233	HGNC:35336											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	REREP3				NR_033735	1	22546564	22570831	24267	0	0	NA	3	txStart-txEnd	UTR			22546564	22570831																										DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44129;DDD:44147;dgv2191n100;dgv3e224;dgv40e203;dgv92e55;dgv93e55;nsv514767	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22411349-22577661;15:22519942-22726364	0.4271	DDD:44001;DDD:44096;DDD:44113;DDD:44129;DDD:44147;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22320058-22588019;15:22411349-22577661;15:22519942-22726364	0.1300																																										646396	HGNC:38797											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	MIR4509-1				NR_039732	1	22675147	22675241	94	0	0	NA	1	txStart-txEnd	UTR			22675147	22675241																										DDD:44147;DDD:44168;dgv40e203;dgv93e55	15:20016329-23487546;15:20167087-22869764;15:22519942-22726364;15:22650162-22738662	0.1500	DDD:44147;DDD:44168;dgv40e203;dgv94e55	15:20016329-23487546;15:20167087-23222284;15:22519942-22726364;15:22650162-22738662	0.1000				IMH	15:22658037-28688749	0.1570																																				100616223	HGNC:41860											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	GOLGA8DP				NR_027407	1	22702284	22715728	13444	0	0	NA	18	txStart-txEnd	UTR			22702284	22715728																										DDD:44147;DDD:44168;dgv40e203;dgv93e55	15:20016329-23487546;15:20167087-22869764;15:22519942-22726364;15:22650162-22738662	0.1500	DDD:44147;DDD:44168;dgv40e203;dgv94e55	15:20016329-23487546;15:20167087-23222284;15:22519942-22726364;15:22650162-22738662	0.1000				IMH	15:22658037-28688749	0.1570																																				100132979	HGNC:32376											full=1
15_20432852_22765687_DUP_1	15	20432852	22765687	2332836	DUP		Benign	NA	split	q11.2	GOLGA6L1				NM_001001413	3	22736245	22746002	9757	2007	100	no	9	txStart-txEnd	5'UTR-3'UTR			22736245	22746002																										dgv40e203;dgv93e55	15:20016329-23487546;15:20167087-22869764	0.1500	dgv40e203;dgv94e55	15:20016329-23487546;15:20167087-23222284	0.1000				IMH	15:22658037-28688749	0.1570																										93.48										283767	HGNC:37444						8	2.3586e-12				full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	full	q11.1-q11.2	HERC2P3;GOLGA6L6;GOLGA8CP;NBEAP1;MIR3118-2;POTEB2;MIR5701-1;LINC01193;FAM30C;LOC646214;CXADRP2;POTEB;NF1P2;LINC02203;OR4M2-OT1;OR4M2;OR4N4	CHEK2P2	OR4N3P	17																ADAM22 (morbid/RE=mTL_miRNA);CA12 (morbid/RE=mTL_miRNA);CDKN1B (HI=3/morbid/RE=mTL_miRNA);DICER1 (HI=3/morbid/RE=mTL_miRNA);EDAR (morbid/RE=mTL_miRNA);EGLN1 (morbid/RE=mTL_miRNA);ERBB3 (morbid/RE=mTL_miRNA);GABRB2 (morbid/RE=mTL_miRNA);GATA6 (HI=3/morbid/RE=mTL_miRNA);HSPD1 (morbid/RE=mTL_miRNA);IL6ST (morbid/RE=mTL_miRNA);INF2 (morbid/RE=mTL_miRNA);ISCU (morbid/RE=mTL_miRNA);KAT6B (HI=3/morbid/RE=mTL_miRNA);KCNJ10 (morbid/RE=mTL_miRNA);KLHL3 (morbid/RE=mTL_miRNA);KMT2D (HI=3/morbid/RE=mTL_miRNA);LRIG2 (morbid/RE=mTL_miRNA);MAGEL2 (morbid/RE=ABC_enhancer);MAPKAPK5 (morbid/RE=mTL_miRNA);MKRN3 (morbid/RE=ABC_enhancer);NDUFS1 (morbid/RE=mTL_miRNA);NIPA1 (morbid/RE=ABC_enhancer);NPM1 (morbid/RE=mTL_miRNA);PEX26 (morbid/RE=mTL_miRNA);PHF12 (HI=3/RE=mTL_miRNA);PIGP (morbid/RE=mTL_miRNA);POT1 (morbid/RE=mTL_miRNA);PRLR (morbid/RE=mTL_miRNA);PURA (HI=3/morbid/RE=mTL_miRNA);RAC3 (morbid/RE=mTL_miRNA);SH2D1A (HI=3/morbid/RE=mTL_miRNA);SKI (morbid/RE=mTL_miRNA);SLC6A6 (morbid/RE=mTL_miRNA);SLC7A14 (morbid/RE=mTL_miRNA);SLC7A7 (morbid/RE=mTL_miRNA);SMAD4 (HI=3/morbid/RE=mTL_miRNA);SMAD6 (morbid/RE=mTL_miRNA);SMOC1 (morbid/RE=mTL_miRNA);SMOC2 (morbid/RE=mTL_miRNA);SOX17 (morbid/RE=mTL_miRNA);TULP1 (morbid/RE=mTL_miRNA);USP48 (morbid/RE=mTL_miRNA);ZBTB18 (HI=3/morbid/RE=mTL_miRNA);ZNF711 (morbid/RE=mTL_miRNA)															dbVar:nssv15172447;dbVar:nssv15149081;dbVar:nssv15148902;dbVar:nssv15125410;dbVar:nssv15127689;dbVar:nssv15127462;dbVar:nssv15126524;dbVar:nssv15124656;dbVar:nssv15127659;dbVar:nssv15126021;dbVar:nssv15172190;dbVar:nssv15150569;dbVar:nssv15147052;dbVar:nssv15145742;dbVar:nssv15147053;dbVar:nssv15175556;dbVar:nssv15145744;dbVar:nssv15774514;dbVar:nssv15148785;dbVar:nssv15605894;dbVar:nssv15149135;dbVar:nssv15148575;dbVar:nssv15147687;dbVar:nssv15605895;dbVar:nssv15147058;dbVar:nssv15145747;dbVar:nssv15146452;dbVar:nssv15149084;dbVar:nssv15147355;dbVar:nssv15149616;dbVar:nssv15147801;dbVar:nssv15146958;dbVar:nssv15149124;dbVar:nssv15123304;dbVar:nssv15147513;dbVar:nssv15127079;dbVar:nssv15605897;dbVar:nssv15605899	15:20016812-102493540;15:20044343-28924405;15:20045835-32914140;15:20063341-102521392;15:20063341-29093456;15:20063341-29209620;15:20063341-30448351;15:20063341-32439302;15:20063341-32942613;15:20063341-32986584;15:20071674-102461162;15:20071674-30737344;15:20085003-28947309;15:20085003-29210720;15:20085004-28178425;15:20102541-29031690;15:20110723-28408897;15:20179528-32998070;15:20190549-28406650;15:20190549-30300265;15:20190549-32386089;15:20190549-32917801;15:20190549-32917857;15:20191653-28525310;15:20207714-30641396;15:20207714-32413623;15:20251769-28631040;15:20306550-26208861;15:20686197-30509384;15:20733396-102511616;15:20733396-28406650;15:20733396-28406709;15:20848461-27662530;15:21129985-28535266;15:22304597-28577787;15:22318645-29209620;15:22382861-32396457;15:22383300-32917689	2.24;20.77;14.34;2.24;20.43;20.17;17.76;14.91;14.32;14.27;2.24;17.30;20.82;20.22;22.79;20.66;22.23;14.39;22.45;18.25;15.13;14.49;14.49;22.14;17.68;15.11;22.02;31.26;17.54;2.05;21.84;21.84;22.91;17.28;1.67;1.32;0.26;0.25			dbVar:nssv16865885;dbVar:nssv18326337;dbVar:nssv15605896;dbVar:nssv15123310;dbVar:nssv18841918;dbVar:nssv16208656;dbVar:nssv18792791;dbVar:nssv16215320;dbVar:nssv15147060	15:20612841-23272733;15:20739498-28566579;15:20848751-32925141;15:21129985-32514926;15:21172301-26208861;15:21903816-23272733;15:22070541-23262343;15:22299435-23226254;15:22318598-28940098	67.54;21.33;12.92;11.24;24.56;36.93;28.43;11.86;1.37			DDD:44001;dgv2191n100;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019	0.3900	DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.1300									15:20037886-21236662 DDD:43986;15:20167087-21200251 dgv91e55;15:20167087-22869764 dgv93e55;15:20203950-22588019 dgv2191n100;15:20550641-20637800 nsv514762;15:20575412-20599635 DDD:44041;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20650251-20710056 nsv514763;15:20717000-20724000 gnomAD-SV_v2.1_DUP_15_39413;15:20749534-20773538 DDD:44053;15:20779661-20885221 DDD:44055;15:20786000-20827000 gnomAD-SV_v2.1_DUP_15_39420;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20935077-20960284 nsv514764;15:21069662-21311925 DDD:44068;15:21153622-21170901 nsv514766...	15:20016329-23487546 dgv40e203;15:20144627-21266621 DDD:43992;15:20167087-22588036 dgv92e55;15:20182203-22608281 DDD:44001;15:20388742-22207639 TS40:ISCA-46686;15:20556528-20624827 DDD:44039;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 dgv430e214;15:20686000-20711550 gnomAD-SV_v2.1_DUP_15_39411;15:20746872-20747023 DDD:44052;15:20751226-21293606 esv3892595;15:20783000-20799000 gnomAD-SV_v2.1_DUP_15_39419;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 dgv431e214;15:21040437-21077011 nsv514765;15:21145102-21164300 TS40:ISCA-46688...			15:20144627-21266621 DDD:43992;15:20167090-22588036 dgv96e55;15:20556528-20624827 DDD:44039;15:20581414-20589751 IMH;chr15:20587419-20587601 dbVar;chr15:20698000-20706500 dbVar;15:20729175-20745525 HI40:ISCA-46468;chr15:20732300-20738500 dbVar;15:20779661-20885221 DDD:44055;chr15:20806100-20823500 dbVar;15:20820627-20821162 gnomAD-SV_v2.1_DEL_15_145830;chr15:20881220-20881325 dbVar;15:20945597-20946011 esv2664547;chr15:21017763-21017994 dbVar;chr15:21042050-21056300 dbVar;15:21069662-21311925 DDD:44068;chr15:21282800-21314300 dbVar;chr15:21348205-21348677 dbVar;chr15:21888050-21888102 dbVar;15:21904679-21949433 DDD:44097...	15:20016329-23487546 dgv40e203;15:20167087-23222284 dgv94e55;15:20182203-22608281 DDD:44001;15:20575412-20599635 DDD:44041;15:20581464-20589613 esv2674516;15:20587419-20587601 gnomAD-SV_v2.1_DEL_15_145824;15:20698000-20706500 gnomAD-SV_v2.1_DEL_15_145825;chr15:20729175-20745525 dbVar;15:20749534-20773538 DDD:44053;chr15:20781000-20811000 dbVar;chr15:20820627-20821162 dbVar;chr15:20820696-20820748 dbVar;chr15:20891428-20891785 dbVar;chr15:20976350-20994050 dbVar;15:21042050-21056300 HI40:ISCA-46469;15:21042050-21056300 gnomAD-SV_v2.1_DEL_15_145837;chr15:21200932-21201488 dbVar;15:21321039-21325126 DDD:44088;15:21399090-22661412 DDD:44096;15:21888050-21888102 gnomAD-SV_v2.1_DEL_15_145844...	0.310	0.275							15:20564282-20581643	15:22292726-22423285	15:20200401-22365100	High Signal Region	15:22387401-22749100	Low Mappability				93.81				2.22375841006203	2.58284576037233												8	3.5277e-01	5.7189e-01	-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (17 genes, +0.00);5F (+0.00)	1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.1-q11.2	HERC2P3				NR_036432	1	20613648	20711433	97785	0	0	NA	26	txStart-txEnd	UTR			20613648	20711433																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																										283755	HGNC:4871											full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	GOLGA6L6				NM_001145004	2	20737093	20747114	10021	2175	100	no	11	txStart-txEnd	5'UTR-3'UTR			20737093	20747114																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																93.81				0.630577750419089	0.0606178603183018					727832	HGNC:37225						8	2.2875e-19	8.6864e-02			full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	GOLGA8CP				NR_027411	2	20767673	20781026	13353	0	0	NA	18	txStart-txEnd	UTR			20767673	20781026																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																										729786	HGNC:32375											full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	NBEAP1				NR_027992	1	20874796	20961480	86684	0	0	NA	3	txStart-txEnd	UTR			20874796	20961480																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																										606	HGNC:1007											full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	MIR3118-2				NR_036062	2	21038123	21038198	75	0	0	NA	1	txStart-txEnd	UTR			21038123	21038198																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																										100422949	HGNC:38324											full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	POTEB2				NM_001277303	1	21040700	21071643	30943	1635	100	no	11	txStart-txEnd	5'UTR-3'UTR			21040700	21071643																										DDD:43986;DDD:43992;DDD:44001;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595;nsv514765	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606;15:21040437-21077011	0.3900	DDD:43992;DDD:44001;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281	0.2710																																92.58				2.22375841006203	2.58284576037233					100287399	HGNC:48327						8	4.2457e-02	5.7189e-01			full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	MIR5701-1				NR_049886	1	21145580	21145662	82	0	0	NA	1	txStart-txEnd	UTR			21145580	21145662																										DDD:43986;DDD:43992;DDD:44001;DDD:44068;TS40:ISCA-46686;TS40:ISCA-46688;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606;15:21069662-21311925;15:21145102-21164300	0.3900	DDD:43992;DDD:44001;DDD:44068;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21069662-21311925	0.2710																																										100847060	HGNC:43522											full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	LINC01193				NR_040094	1	21145766	21198633	52867	0	0	NA	5	txStart-txEnd	UTR			21145766	21198633																										DDD:43986;DDD:43992;DDD:44001;DDD:44068;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv91e55;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20037886-21236662;15:20144627-21266621;15:20167087-21200251;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606;15:21069662-21311925	0.3900	DDD:43992;DDD:44001;DDD:44068;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21069662-21311925	0.2710																																										348120	HGNC:28003											full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	FAM30C				NR_145444	1	21208605	21255165	46560	0	0	NA	4	txStart-txEnd	UTR			21208605	21255165																										DDD:43992;DDD:44001;DDD:44068;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55;esv3892595	15:20016329-23487546;15:20144627-21266621;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:20751226-21293606;15:21069662-21311925	0.3900	DDD:43992;DDD:44001;DDD:44068;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20144627-21266621;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21069662-21311925	0.2710																																										654499	HGNC:31024											full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	LOC646214				NR_027053	2	21932513	21940739	8226	0	0	NA	1	txStart-txEnd	UTR			21932513	21940739																										DDD:44001;DDD:44096;DDD:44097;DDD:44098;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:21399090-22661412;15:21904679-21949433;15:21906623-22142846	0.3900	DDD:44001;DDD:44096;DDD:44097;DDD:44098;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:21904679-21949433;15:21906623-22142846	0.1300																																																						full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	CXADRP2				NR_024387	1	22014402	22016878	2476	0	0	NA	1	txStart-txEnd	UTR			22014402	22016878																										DDD:44001;DDD:44096;DDD:44098;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:21399090-22661412;15:21906623-22142846	0.3900	DDD:44001;DDD:44096;DDD:44098;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:21906623-22142846	0.1300																																										646243	HGNC:33973											full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	POTEB				NM_001277304	2	22051852	22083259	31407	1635	100	no	11	txStart-txEnd	5'UTR-3'UTR			22051852	22083259																										DDD:44001;DDD:44096;DDD:44098;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:21399090-22661412;15:21906623-22142846	0.3900	DDD:44001;DDD:44096;DDD:44098;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:21906623-22142846	0.1300																																91.86										100996331	HGNC:33734						9	3.5277e-01				full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	NF1P2				NR_028506	2	22133180	22145802	12622	0	0	NA	8	txStart-txEnd	UTR			22133180	22145802																										DDD:44001;DDD:44096;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:21399090-22661412	0.3900	DDD:44001;DDD:44096;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412	0.1300																																										440225	HGNC:38664											full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	LINC02203				NR_152818	1	22195582	22199978	4396	0	0	NA	3	txStart-txEnd	UTR			22195582	22199978																										DDD:44001;DDD:44096;TS40:ISCA-46686;dgv2191n100;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:20388742-22207639;15:21399090-22661412	0.3900	DDD:44001;DDD:44096;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412	0.1300																																										727924	HGNC:53069											full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	OR4M2-OT1				NR_110480	1	22278030	22383564	105534	0	0	NA	9	txStart-txEnd	UTR			22278030	22383564																										DDD:44001;DDD:44096;dgv2191n100;dgv3e224;dgv40e203;dgv92e55;dgv93e55	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752	0.3900	DDD:44001;DDD:44096;dgv40e203;dgv94e55;dgv96e55	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412	0.1300																																										101927079	HGNC:56199											full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	OR4M2				NM_001004719	2	22368477	22369561	1084	942	95	no	1	txStart-txEnd	5'UTR-3'UTR			22368477	22369561																										1000g;DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44114;DDD:44119;dgv2191n100;dgv3e224;dgv40e203;dgv435e214;dgv92e55;dgv93e55;nsv514767	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22343966-22372302;15:22343966-22372302;15:22343966-22372302;15:22343966-22372302;15:22343966-22372302;15:22343966-22372302;15:22360686-22387071	0.4271	DDD:44001;DDD:44096;DDD:44113;DDD:44114;DDD:44119;dbVar;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22320058-22588019;chr15:22343965-22372302;15:22360686-22387071	0.1300																																76.23										390538	HGNC:15373						9	3.9447e-08				full=1
15_20564609_22409391_DEL_1	15	20564609	22409391	-1844783	DEL		Benign	NA	split	q11.2	OR4N4				NM_001005241	4	22382472	22383813	1341	951	100	no	1	txStart-txEnd	5'UTR-3'UTR			22382472	22383813																										DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44114;DDD:44119;dgv2191n100;dgv3e224;dgv40e203;dgv92e55;dgv93e55;nsv514767	15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22360686-22387071	0.4271	DDD:44001;DDD:44096;DDD:44113;DDD:44114;DDD:44119;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767	15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22320058-22588019;15:22360686-22387071	0.1300																																75.33				-0.271906921498889	-0.565772314050669					283694	HGNC:15375						9	5.1332e-05	1.8051e-02			full=1
15_34735950_34806953_DEL_1	15	34735950	34806953	-71004	DEL		Benign	NA	full	q14		MIR1233-1	GOLGA8B	0																ACTC1 (morbid/RE=ABC_enhancer);RYR3 (morbid/RE=ABC_enhancer);SLC12A6 (morbid/RE=ABC_enhancer+EA_enhancer)															dbVar:nssv15172447;dbVar:nssv15125410;dbVar:nssv15172190;dbVar:nssv15149616;dbVar:nssv15147411;dbVar:nssv15150618;nssv15150717;dbVar:nssv15151655;dbVar:nssv15145681	15:20016812-102493540;15:20063341-102521392;15:20071674-102461162;15:20733396-102511616;15:22765629-38837526;15:22770423-102429112;15:31115048-102354857;15:32899500-35492630	0.09;0.09;0.09;0.09;0.44;0.09;0.10;2.74			dbVar:nssv15147319;dbVar:nssv16208403;dbVar:nssv15127755;dbVar:nssv15148236;dbVar:nssv15127602;dbVar:nssv16208407;dbVar:nssv15154730;dbVar:nssv15146365;dbVar:nssv15146268;dbVar:nssv17976656;dbVar:nssv16208948;dbVar:nssv18788041	15:22698523-38381783;15:22770422-36861479;15:23622527-102521392;15:25279017-37496505;15:29209621-102521392;15:31675453-35689958;15:32446830-34868996;15:32618338-39686269;15:32928005-40526026;15:33809651-40027263;15:34197489-38656254;15:34526073-35087019	0.45;0.50;0.09;0.58;0.10;1.77;2.93;1.00;0.93;1.14;1.59;12.66			1000g	15:34721237-34836826	0.0144	1000g;DDD:44673;DDD:44674;HI40:ISCA-46481;HI40:ISCA-46482;dbVar;dgv2562n100;dgv313n27;dgv43e203;esv3636115;esv3892663;gnomAD-SV_v2.1_DEL_15_146738;gnomAD-SV_v2.1_DEL_15_146739;nsv517751	15:34647569-34871296;15:34674031-35008201;15:34674425-35009836;15:34678778-34862723;15:34710127-34856557;chr15:34710127-34856557;15:34710127-34856557;15:34714112-34830932;15:34718595-34807869;15:34718595-34871296;chr15:34721236-34836826;15:34721237-34836826;15:34721237-34836826;15:34726358-34872885;chr15:34726358-34872885;15:34726358-34872885	0.1680									15:34741740-34742019 1000g	15:34721237-34836826 1000g			15:34674031-35008201 DDD:44673;15:34678778-34862723 dgv43e203;chr15:34710127-34856557 dbVar;15:34714112-34830932 dgv2562n100;15:34718595-34807869 esv3892663;chr15:34721236-34836826 dbVar;15:34721237-34836826 esv3636115;chr15:34726358-34872885 dbVar;15:34741740-34742019 1000g;15:34741749-34742029 esv2678102;15:34741752-34742021 gnomAD-SV_v2.1_DEL_15_146741;chr15:34746988-34747300 dbVar;15:34779146-34783492 esv2667455;chr15:34785640-34786870 dbVar;15:34802473-34810922 1000g;15:34802548-34810836 DDD:44684;15:34802595-34810858 gnomAD-SV_v2.1_DEL_15_146744	15:34647569-34871296 nsv517751;15:34674425-35009836 DDD:44674;15:34710127-34856557 HI40:ISCA-46481;15:34710127-34856557 gnomAD-SV_v2.1_DEL_15_146738;15:34718595-34800595 dgv312n27;15:34718595-34871296 dgv313n27;15:34721237-34836826 1000g;15:34726358-34872885 HI40:ISCA-46482;15:34726358-34872885 gnomAD-SV_v2.1_DEL_15_146739;chr15:34741740-34742019 dbVar;chr15:34741752-34742021 dbVar;chr15:34743793-34743843 dbVar;15:34746988-34747300 gnomAD-SV_v2.1_DEL_15_146743;15:34779302-34783300 DDD:44682;chr15:34802472-34810922 dbVar;15:34802473-34810922 esv3636118;chr15:34802595-34810858 dbVar	0.340	0.660							15:34730084-34776964	15:34782963-34820866;15:34800001-34813836																												-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (0 gene, +0.00);5F (+0.00)	1
16_32471626_33487672_DEL_1	16	32471626	33487672	-1016047	DEL		Benign	NA	full	p11.2	LOC107987382;TP53TG3;SLC6A10P;TP53TG3C;LOC105369266;TP53TG3B;LOC107987386	LOC390705	ENPP7P13	7																															dbVar:nssv15158812;dbVar:nssv15148703;dbVar:nssv15150639;nssv15151292;dbVar:nssv15158813;dbVar:nssv15158224;dbVar:nssv16216874;dbVar:nssv15126545;dbVar:nssv15133058;dbVar:nssv15126469	16:61452-90294632;16:69194-90274381;16:85882-90155062;16:88166-90163275;16:88166-90274695;16:5805002-34230001;16:24381954-33923059;16:30703234-35147508;16:31986099-90294753	1.13;1.13;1.13;1.13;1.13;3.57;10.65;22.86;1.74			dbVar:nssv15141243	16:28826163-34375007	18.31			DDD:47058;DDD:47062;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028	0.0700	DDD:47058;DDD:47062;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028	0.0715				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996			16:32055083-33851279 DDD:47058;16:32129166-32904510 DDD:47063;16:32345385-33344188 IMH;16:32486529-32486871 DDD:47082;16:32511180-33912324 dgv821e212;16:32611030-32642738 1000g;16:32611030-32642738 dgv507e214;16:32740800-32750700 gnomAD-SV_v2.1_DUP_16_42037;16:32831660-32863935 1000g;16:32831660-32863935 dgv508e214;16:32903492-32927819 1000g;16:33204449-33378738 DDD:47113;16:33231300-33237300 gnomAD-SV_v2.1_DUP_16_42041;16:33286000-33293700 gnomAD-SV_v2.1_DUP_16_42046;16:33376004-33548487 DDD:47124;16:33446164-33480261 1000g;16:33446164-33480261 dgv510e214;16:33470756-33495606 1000g;16:33470756-33495606 dgv511e214;16:33484522-33543753 1000g...	16:31749454-34012168 dgv50e203;16:32123333-33664028 DDD:47062;16:32257510-32714406 esv2421440;16:32473116-32486576 DDD:47080;16:32489448-32622550 dgv4e224;16:32589803-32684945 DDD:47091;16:32611030-32642738 1000g;16:32684868-32688916 DDD:47098;16:32831660-32863935 1000g;16:32831660-32863935 1000g;16:32900256-32908555 nsv514802;16:32903492-32927819 dgv509e214;16:33230271-33739925 DDD:47114;16:33270420-33827235 DDD:47116;16:33302092-33630727 nsv514803;16:33406659-33406773 IMH;16:33446164-33480261 1000g;16:33464249-33499453 DDD:47125;16:33470756-33495606 1000g;16:33473790-33628580 DDD:47126...			16:32052946-32496748 DDD:47057;16:32123333-33664028 DDD:47062;16:32257510-32714406 esv2421440;chr16:32473466-32473664 dbVar;16:32485788-32648832 DDD:47081;16:32489448-32622550 dgv4e224;chr16:32494596-32496820 dbVar;chr16:32511665-32511727 dbVar;16:32524651-32525229 IMH;16:32532282-32533735 IMH;16:32562331-32601372 IMH;chr16:32586298-32586783 dbVar;16:32588181-32590788 1000g;16:32589803-32684945 DDD:47091;chr16:32598581-32602963 dbVar;16:32598582-32602963 esv3638436;16:32600138-32601847 IMH;16:32600306-32601869 1000g;16:32600344-32601845 IMH;chr16:32611029-32642738 dbVar...	16:31749454-34012168 dgv50e203;16:32055083-33851279 DDD:47058;16:32129166-32904510 DDD:47063;16:32298051-32812316 DDD:47074;chr16:32485126-32485204 dbVar;16:32486808-32486871 DDD:47084;chr16:32491490-32496732 dbVar;16:32511180-32878155 dgv819e212;16:32518848-32519371 IMH;16:32525918-32525974 IMH;16:32541493-32648861 DDD:47087;16:32562341-32600296 IMH;chr16:32588180-32590788 dbVar;16:32588181-32590788 esv3638433;16:32590685-32653097 DDD:47092;16:32598582-32602963 1000g;chr16:32598863-32598991 dbVar;chr16:32600305-32601869 dbVar;16:32600306-32601869 esv3638437;16:32600531-32601385 IMH...	0.255	0.275	16:32471562-32471589	AT_rich					16:32328196-32493021;16:32333061-32489849;16:32333061-32492391;16:32462184-32472474	16:33363548-33517471;16:33465320-33517471;16:33466597-33509202								94.39																				-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (7 genes, +0.00);5F (+0.00)	1
16_32471626_33487672_DEL_1	16	32471626	33487672	-1016047	DEL		Benign	NA	split	p11.2	LOC107987382				NR_171659	1	32611681	32626892	15211	0	0	NA	8	txStart-txEnd	UTR			32611681	32626892																										1000g;DDD:47058;DDD:47062;DDD:47063;DDD:47091;IMH;dgv507e214;dgv50e203;dgv821e212;esv2421440	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32345385-33344188;16:32511180-33912324;16:32589803-32684945;16:32611030-32642738;16:32611030-32642738;16:32611030-32642738	0.8086	DDD:47058;DDD:47062;DDD:47063;DDD:47074;DDD:47081;DDD:47087;DDD:47091;DDD:47092;dbVar;dgv50e203;dgv819e212;esv2421440	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32298051-32812316;16:32485788-32648832;16:32511180-32878155;16:32541493-32648861;16:32589803-32684945;16:32590685-32653097;chr16:32611029-32642738	0.2300				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																																																full=1
16_32471626_33487672_DEL_1	16	32471626	33487672	-1016047	DEL		Benign	NA	split	p11.2	TP53TG3				NM_016212	5	32684850	32687486	2636	375	100	no	2	txStart-txEnd	5'UTR-3'UTR			32684850	32687486																										DDD:47058;DDD:47062;DDD:47063;IMH;dgv50e203;dgv821e212;esv2421440	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32345385-33344188;16:32511180-33912324	0.3314	DDD:47058;DDD:47062;DDD:47063;DDD:47074;HI40:ISCA-46492;dbVar;dgv50e203;dgv819e212;esv2421440	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32298051-32812316;16:32511180-32878155;16:32656000-32802000;chr16:32656000-32802000	0.2300				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																										94.39										24150	HGNC:30759											full=1
16_32471626_33487672_DEL_1	16	32471626	33487672	-1016047	DEL		Benign	NA	split	p11.2	SLC6A10P				NR_003083	3	32888793	32896463	7670	0	0	NA	9	txStart-txEnd	UTR			32888793	32896463																										DDD:47058;DDD:47062;DDD:47063;IMH;dgv50e203;dgv821e212	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32345385-33344188;16:32511180-33912324	0.3314	DDD:47058;DDD:47062;DDD:47063;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510	0.1692				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																																				386757	HGNC:11043											full=1
16_32471626_33487672_DEL_1	16	32471626	33487672	-1016047	DEL		Benign	NA	split	p11.2	TP53TG3C				NM_001205259	3	33205546	33208179	2633	375	100	no	2	txStart-txEnd	5'UTR-3'UTR			33205546	33208179																										DDD:47058;DDD:47062;DDD:47113;IMH;dgv50e203;dgv821e212	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738	0.3314	DDD:47058;DDD:47062;DDD:47113;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738	0.0715				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																										91.96										653550	HGNC:42962											full=1
16_32471626_33487672_DEL_1	16	32471626	33487672	-1016047	DEL		Benign	NA	split	p11.2	LOC105369266				NR_158162	1	33215160	33232409	17249	0	0	NA	6	txStart-txEnd	UTR			33215160	33232409																										DDD:47058;DDD:47062;DDD:47113;IMH;dgv50e203;dgv821e212	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738	0.3314	DDD:47058;DDD:47062;DDD:47113;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738	0.0715				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																																																full=1
16_32471626_33487672_DEL_1	16	32471626	33487672	-1016047	DEL		Benign	NA	split	p11.2	TP53TG3B				NM_001099687	4	33262081	33264719	2638	375	100	no	2	txStart-txEnd	5'UTR-3'UTR			33262081	33264719																										DDD:47058;DDD:47062;DDD:47113;DDD:47114;IMH;dgv50e203;dgv821e212	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738;16:33230271-33739925	0.3314	DDD:47058;DDD:47062;DDD:47113;DDD:47114;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738;16:33230271-33739925	0.1243				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																										92.24										729355	HGNC:37202											full=1
16_32471626_33487672_DEL_1	16	32471626	33487672	-1016047	DEL		Benign	NA	split	p11.2	LOC107987386				NR_171660	1	33298270	33319296	21026	0	0	NA	5	txStart-txEnd	UTR			33298270	33319296																										DDD:47058;DDD:47062;DDD:47113;DDD:47114;DDD:47116;IMH;dgv50e203;dgv821e212	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738;16:33230271-33739925;16:33270420-33827235	0.5150	DDD:47058;DDD:47062;DDD:47113;DDD:47114;dgv50e203	16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738;16:33230271-33739925	0.1243				IMH	16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560	0.4996																																																full=1
16_34493207_34702366_DUP_1	16	34493207	34702366	209160	DUP		Benign	NA	full	p11.2-p11.1	LINC01566	LOC105371200	FRG2DP	1																															dbVar:nssv15158812;dbVar:nssv15148703;dbVar:nssv15150639;nssv15151292;dbVar:nssv15158813;dbVar:nssv15158224;dbVar:nssv15133058;dbVar:nssv15126469;dbVar:nssv15150356	16:61452-90294632;16:69194-90274381;16:85882-90155062;16:88166-90163275;16:88166-90274695;16:30703234-35147508;16:31986099-90294753;16:34197493-64509054	0.23;0.23;0.23;0.23;0.23;4.71;0.36;0.69								1000g;DDD:47173;DDD:47179;TS40:ISCA-37481;dgv117e55;dgv2962n100;dgv51e203;dgv824e212;esv2421698;esv3638500;gnomAD-SV_v2.1_DUP_16_42078;nsv514804;nsv516385	16:34197352-35283226;16:34202089-35147508;16:34259806-34805859;16:34410570-34796531;16:34441796-34784591;16:34445084-34774280;16:34456525-34736855;16:34457086-34712399;16:34457086-34712399;16:34465000-34757000;16:34470705-34757071;16:34471852-34731191;16:34476781-34747070	0.1875	HI40:ISCA-37481;dbVar	16:34202089-35147508;chr16:34457085-34712399	0.01				IMH	16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460	0.4996			16:34202089-35147508 TS40:ISCA-37481;16:34410570-34796531 dgv117e55;16:34445084-34774280 dgv824e212;16:34457086-34712399 1000g;16:34465000-34757000 gnomAD-SV_v2.1_DUP_16_42078;16:34471852-34731191 nsv514804;16:34567146-34656231 DDD:47183;	16:34197352-35283226 dgv51e203;16:34259806-34805859 nsv516385;16:34441796-34784591 dgv2962n100;16:34456525-34736855 DDD:47173;16:34457086-34712399 esv3638500;16:34470705-34757071 esv2421698;16:34476781-34747070 DDD:47179;16:34572795-34661165 gnomAD-SV_v2.1_DUP_16_42081			chr16:34457085-34712399 dbVar;chr16:34513700-34518239 dbVar;chr16:34521342-34521422 dbVar;chr16:34530127-34530478 dbVar;chr16:34539678-34540320 dbVar;chr16:34563433-34571562 dbVar;chr16:34590029-34590133 dbVar;chr16:34590961-34591436 dbVar;chr16:34604209-34604282 dbVar;chr16:34659877-34659999 dbVar;chr16:34666766-34667080 dbVar;chr16:34687510-34703789 dbVar	16:34202089-35147508 HI40:ISCA-37481;chr16:34502223-34502386 dbVar;chr16:34515750-34515813 dbVar;chr16:34530038-34530588 dbVar;chr16:34539652-34540292 dbVar;16:34539693-34540322 DDD:47181;chr16:34568138-34568693 dbVar;chr16:34590565-34590648 dbVar;chr16:34600723-34610152 dbVar;chr16:34655648-34655724 dbVar;chr16:34664288-34664480 dbVar;chr16:34684662-34685228 dbVar	0.385	0.335																																				-1.0	1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);3A (1 gene, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)	1
16_34493207_34702366_DUP_1	16	34493207	34702366	209160	DUP		Benign	NA	split	p11.2-p11.1	LINC01566				NR_027080	2	34597786	34626084	28298	0	0	NA	7	txStart-txEnd	UTR			34597786	34626084																										1000g;DDD:47173;DDD:47179;DDD:47183;TS40:ISCA-37481;dgv117e55;dgv2962n100;dgv51e203;dgv824e212;esv2421698;esv3638500;gnomAD-SV_v2.1_DUP_16_42078;gnomAD-SV_v2.1_DUP_16_42081;nsv514804;nsv516385	16:34197352-35283226;16:34202089-35147508;16:34259806-34805859;16:34410570-34796531;16:34441796-34784591;16:34445084-34774280;16:34456525-34736855;16:34457086-34712399;16:34457086-34712399;16:34465000-34757000;16:34470705-34757071;16:34471852-34731191;16:34476781-34747070;16:34567146-34656231;16:34572795-34661165	0.1875	HI40:ISCA-37481;dbVar	16:34202089-35147508;chr16:34457085-34712399	0.01				IMH	16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460	0.4996																																				283914	HGNC:27555											full=1
17_34437476_34817481_DUP_1	17	34437476	34817481	380006	DUP		Benign	NA	full	q12	TBC1D3B;CCL3L3;CCL4L2;TBC1D3D;CCL3L1;TBC1D3H;TBC1D3F	CCL4	ZNHIT3	7																PEX12 (morbid/RE=GH_enhancer);PIGW (morbid/RE=EA_enhancer);ZNHIT3 (morbid/RE=ABC_enhancer+GH_enhancer)													17q12 recurrent (RCAD syndrome) region (includes HNF1B)		dbVar:nssv15149908;nssv15152170;dbVar:nssv15159024;dbVar:nssv15160732;dbVar:nssv15159027;dbVar:nssv15127236;dbVar:nssv15775117;dbVar:nssv15132421;dbVar:nssv15132422;dbVar:nssv15155541;dbVar:nssv18330713;dbVar:nssv15155542;dbVar:nssv15605916;dbVar:nssv16736632;dbVar:nssv15138685;dbVar:nssv15142873;dbVar:nssv15141421;dbVar:nssv15132229;nssv15139703;dbVar:nssv15125411;dbVar:nssv15125622;dbVar:nssv15130152;nssv15132345;nssv15139691;dbVar:nssv15135915;dbVar:nssv15124805;dbVar:nssv18842005;TS3:ISCA-37432;dbVar:nssv15132164;dbVar:nssv17649867;dbVar:nssv16215252;dbVar:nssv15123756;dbVar:nssv15133519;dbVar:nssv16736603;dbVar:nssv15135870	17:527-81041938;17:7215-81058310;17:8548-81060040;17:12345-81057996;17:16757564-81048189;17:21690654-38772647;17:34310999-36297053;17:34360169-36209228;17:34425363-36283612;17:34425364-36404555;17:34426245-36225988;17:34437476-36214026;17:34437476-36243028;17:34437483-36244358;17:34437483-36350584;17:34437483-36404555;17:34508118-36248918;17:34526602-36188734;17:34604365-36231917;17:34611353-36248918;17:34611353-36263019;17:34750819-36354738;17:34752222-36105007;17:34815073-36192489;17:34815185-36209228;17:34815467-36249366;17:34815552-36244358;17:34815552-36249800;17:34817423-36173763;17:34817423-36243028;17:34817423-36248918	0.47;0.47;0.47;0.47;0.59;2.22;19.13;20.55;20.45;19.20;21.11;21.39;21.05;21.03;19.86;19.32;17.77;17.50;13.09;12.59;12.48;4.16;4.82;0.17;0.16;0.14;0.14;0.13;0.00;0.00;0.00	17q12 recurrent (RCAD syndrome) region (includes HNF1B)		dbVar:nssv18830976;dbVar:nssv15137372;dbVar:nssv8639331;dbVar:nssv15142228;dbVar:nssv15133035;dbVar:nssv17976904;dbVar:nssv15142015;dbVar:nssv15153182;dbVar:nssv15153183;dbVar:nssv15133261;dbVar:nssv15124226;dbVar:nssv15132100;nssv15139544;dbVar:nssv15127168;dbVar:nssv15133024;dbVar:nssv17955818;HI3:ISCA-37432;dbVar:nssv15149164;dbVar:nssv15129143;dbVar:nssv15130784;nssv15172799;dbVar:nssv15173493;dbVar:nssv15131818;dbVar:nssv15135737;dbVar:nssv15135591;dbVar:nssv15134619	17:30572863-35843988;17:34360169-36248859;17:34360228-36473024;17:34447114-36283612;17:34450406-36248918;17:34463924-36410559;17:34475680-36283612;17:34475680-36311009;17:34477386-36404555;17:34508118-36173763;17:34604365-36188734;17:34611353-36248918;17:34750819-81048189;17:34768967-36263019;17:34807070-36284994;17:34815073-36192489;17:34815073-36192492;17:34815552-36208392;17:34815552-36244358;17:34815552-36307189;17:34817423-36168104;17:34817423-36188700;17:34817423-36248918;17:34817423-36263019	7.21;20.12;17.99;20.17;20.41;18.16;18.91;18.62;17.65;18.57;13.45;12.59;0.14;3.25;0.70;0.17;0.17;0.14;0.14;0.13;0.00;0.00;0.00;0.00			dgv122e55	17:34426246-34870708	0.0300							IMH	17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508	0.2252			17:34416412-34496071 nsv514836;17:34424712-34477480 dgv908e212;17:34426246-34870708 dgv122e55;17:34435513-34485079 dgv3148n100;17:34435674-34621060 DDD:49237;17:34436100-34482872 1000g;17:34436438-34780239 DDD:49240;17:34437483-34477480 dgv910e212;17:34502930-34524195 nsv514837;17:34517741-34540630 DDD:49256;17:34580927-34587273 DDD:49263;17:34625755-34641426 DDD:49271;17:34750173-34796456 DDD:49284;	17:34387632-34629696 esv2762388;17:34416538-34629684 dgv3144n100;17:34425364-34477387 dgv121e55;17:34431132-34484342 DDD:49235;17:34435513-34629696 esv2760467;17:34436100-34482872 1000g;17:34436100-34482872 dgv572e214;17:34437129-34485091 esv2421587;17:34443777-34537005 DDD:49243;17:34502941-34524192 TS40:ISCA-46706;17:34538648-34540293 nsv514838;17:34610042-34641487 nsv514839;17:34746065-34746521 DDD:49283;17:34800000-34914000 gnomAD-SV_v2.1_DUP_17_43954			17:34438323-34449809 DDD:49242;chr17:34445826-34446140 dbVar;17:34508446-34554792 dgv545e199;17:34517741-34540630 DDD:49256;chr17:34540766-34540825 dbVar;17:34580927-34587273 DDD:49263;17:34625755-34641426 DDD:49271;chr17:34642332-34642392 dbVar;17:34702019-34702094 DDD:49280;17:34762644-34775639 DDD:49288;chr17:34812000-36251000 dbVar	17:34436438-34780239 DDD:49240;17:34443777-34537005 DDD:49243;17:34446621-34447535 DDD:49246;17:34509780-34551554 HI40:ISCA-46698;chr17:34528205-34528314 dbVar;17:34540766-34540825 gnomAD-SV_v2.1_DEL_17_159956;17:34591446-34670592 dgv546e199;chr17:34629804-34629885 dbVar;17:34642332-34642392 gnomAD-SV_v2.1_DEL_17_159958;17:34750173-34796456 DDD:49284;chr17:34808750-34815000 dbVar	0.435	0.515	17:34437545-34437861	7SLRNA					17:34405992-34437446;17:34405992-34437446									94.43				2.42746656950142	2.41694262394586											yes	7	3.1517e-01	6.3692e-01	-1.0	1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);3A (7 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)	1
17_34437476_34817481_DUP_1	17	34437476	34817481	380006	DUP		Benign	NA	split	q12	TBC1D3B				NM_001001417	7	34493062	34503996	10934	1650	100	no	14	txStart-txEnd	5'UTR-3'UTR			34493062	34503996																										DDD:49237;DDD:49240;DDD:49243;dgv122e55;dgv3144n100;esv2760467;esv2762388	17:34387632-34629696;17:34416538-34629684;17:34426246-34870708;17:34435513-34629696;17:34435674-34621060;17:34436438-34780239;17:34443777-34537005	0.1041	DDD:49240;DDD:49243	17:34436438-34780239;17:34443777-34537005	0.0982				IMH	17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508	0.2252																										94.43				2.42746656950142	2.41694262394586					414059	HGNC:27011						7	2.1949e-01	6.3692e-01			full=1
17_34437476_34817481_DUP_1	17	34437476	34817481	380006	DUP		Benign	NA	split	q12	CCL3L3				NM_001001437	4	34522267	34524157	1890	282	100	no	3	txStart-txEnd	5'UTR-3'UTR			34522267	34524157																										DDD:49237;DDD:49240;DDD:49243;DDD:49256;TS40:ISCA-46706;dgv122e55;dgv3144n100;esv2760467;esv2762388;nsv514837	17:34387632-34629696;17:34416538-34629684;17:34426246-34870708;17:34435513-34629696;17:34435674-34621060;17:34436438-34780239;17:34443777-34537005;17:34502930-34524195;17:34502941-34524192;17:34517741-34540630	0.1041	DDD:49240;DDD:49243;DDD:49256;HI40:ISCA-46698;dgv545e199	17:34436438-34780239;17:34443777-34537005;17:34508446-34554792;17:34509780-34551554;17:34517741-34540630	0.1500				IMH	17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508	0.2252																										88.85										414062	HGNC:30554						9	3.1517e-01				full=1
17_34437476_34817481_DUP_1	17	34437476	34817481	380006	DUP		Benign	NA	split	q12	CCL4L2				NM_001291471	2	34538464	34540275	1811	312	100	no	3	txStart-txEnd	5'UTR-3'UTR			34538464	34540275																										DDD:49237;DDD:49240;DDD:49256;dgv122e55;dgv3144n100;esv2760467;esv2762388	17:34387632-34629696;17:34416538-34629684;17:34426246-34870708;17:34435513-34629696;17:34435674-34621060;17:34436438-34780239;17:34517741-34540630	0.0994	DDD:49240;DDD:49256;HI40:ISCA-46698;dgv545e199	17:34436438-34780239;17:34508446-34554792;17:34509780-34551554;17:34517741-34540630	0.1500				IMH	17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508	0.2252																										84.65				1.02068766819866	1.31010018701924					9560	HGNC:24066						9	8.8586e-02	4.8994e-01			full=1
17_34437476_34817481_DUP_1	17	34437476	34817481	380006	DUP		Benign	NA	split	q12	TBC1D3D				NM_001291465	2	34581084	34592039	10955	1650	100	no	14	txStart-txEnd	5'UTR-3'UTR			34581084	34592039																										DDD:49237;DDD:49240;dgv122e55;dgv3144n100;esv2760467;esv2762388	17:34387632-34629696;17:34416538-34629684;17:34426246-34870708;17:34435513-34629696;17:34435674-34621060;17:34436438-34780239	0.0994	DDD:49240	17:34436438-34780239	0.0982				IMH	17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508	0.2252																																				101060389	HGNC:28944											full=1
17_34437476_34817481_DUP_1	17	34437476	34817481	380006	DUP		Benign	NA	split	q12	CCL3L1				NM_021006	6	34623841	34625731	1890	282	100	no	3	txStart-txEnd	5'UTR-3'UTR			34623841	34625731																										DDD:49240;dgv122e55;dgv3144n100;esv2760467;esv2762388;nsv514839	17:34387632-34629696;17:34416538-34629684;17:34426246-34870708;17:34435513-34629696;17:34436438-34780239;17:34610042-34641487	0.0994	DDD:49240;dgv546e199	17:34436438-34780239;17:34591446-34670592	0.1000				IMH	17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508	0.2252																										88.49										6349	HGNC:10628					yes	9	1.2057e-01				full=1
17_34437476_34817481_DUP_1	17	34437476	34817481	380006	DUP		Benign	NA	split	q12	TBC1D3H				NM_001123392	4	34746118	34757005	10887	1650	100	no	14	txStart-txEnd	5'UTR-3'UTR			34746118	34757005																										DDD:49240;dgv122e55	17:34426246-34870708;17:34436438-34780239	0.0994	DDD:49240	17:34436438-34780239	0.0982				IMH	17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508	0.2252																										93.12										729877	HGNC:30708											full=1
17_34437476_34817481_DUP_1	17	34437476	34817481	380006	DUP		Benign	NA	split	q12	TBC1D3F				NM_032258	5	34797171	34808058	10887	1650	100	no	14	txStart-txEnd	5'UTR-3'UTR			34797171	34808058																										dgv122e55	17:34426246-34870708	0.0300							IMH	17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508	0.2252																										93.73				1.8673923772413	2.14567117504116					84218	HGNC:18257						9	1.3666e-05	6.2038e-01			full=1
17_44171889_44297143_DUP_1	17	44171889	44297143	125255	DUP		Benign	NA	full	q21.31	KANSL1;KANSL1-AS1	STH	ARL17B	2																GOSR2 (morbid/RE=ABC_enhancer+GH_enhancer);MAPT (morbid/RE=ABC_enhancer);NSF (morbid/RE=EA_enhancer);PLEKHM1 (morbid/RE=ABC_enhancer)															dbVar:nssv15149908;nssv15152170;dbVar:nssv15159024;dbVar:nssv15160732;dbVar:nssv15159027;dbVar:nssv15127236;dbVar:nssv15149626;dbVar:nssv15150382;dbVar:nssv16207328;dbVar:nssv15141990	17:527-81041938;17:7215-81058310;17:8548-81060040;17:12345-81057996;17:16757564-81048189;17:42580685-81085615;17:43655357-44292742;17:43655357-44784639;17:43710151-44292742	0.15;0.15;0.15;0.15;0.19;0.33;18.96;11.09;20.74	Koolen-De Vries syndrome, 610443 (3) AD		dbVar:nssv15127168;dbVar:nssv16215146;dbVar:nssv15141350;dbVar:nssv16254531;dbVar:nssv15124147;dbVar:nssv15135761;dbVar:nssv15137490;dbVar:nssv18330259;dbVar:nssv15129570;dbVar:nssv15138300;dbVar:nssv15137112;dbVar:nssv15132122;dbVar:nssv15132318;nssv15133093;dbVar:nssv15135170;dbVar:nssv15132284;nssv15139974;dbVar:nssv15136771;dbVar:nssv15136778;dbVar:nssv15132380;dbVar:nssv15173411;dbVar:nssv18329240;dbVar:nssv15133422;dbVar:nssv15143597;nssv15155552;dbVar:nssv15138826;dbVar:nssv15142266;nssv17976955;nssv18326376;dbVar:nssv15173506;dbVar:nssv15136011;dbVar:nssv15133428;dbVar:nssv15132370;nssv15140010;dbVar:nssv15132745;dbVar:nssv16091744;dbVar:nssv15135222;dbVar:nssv15161495;dbVar:nssv15129007;dbVar:nssv15152077;dbVar:nssv15132384;dbVar:nssv15136234;dbVar:nssv15132385;dbVar:nssv15133429;morbid:KANSL1;HI3:KANSL1;dbVar:nssv16252231	17:34750819-81048189;17:43559852-44248220;17:43585761-44248995;17:43586397-44212416;17:43592411-44249054;17:43593477-44224221;17:43622198-44201470;17:43622198-44212416;17:43629216-44399455;17:43648492-44214888;17:43651732-44351152;17:43653228-44351644;17:43655748-44176717;17:43655748-44224221;17:43655748-44351152;17:43656694-44176717;17:43656694-44694311;17:43675409-44351152;17:43685926-44212727;17:43693539-44212416;17:43693608-44176717;17:43703801-44212416;17:43703802-44187492;17:43703802-44212416;17:43705602-44208333;17:43706887-44171947;17:43706887-44176171;17:43706887-44176717;17:43706887-44207977;17:43706887-44210822;17:43706887-44351152;17:43706887-44694283;17:43706896-44762543;17:43710371-44212416;17:43715081-44176717;17:43717704-44345038;17:43717704-44351152;17:43751675-44351152;17:44107282-44302733;17:44107283-44302733;17:44174220-44481307	0.27;11.09;11.63;6.47;11.75;8.30;5.11;6.87;16.26;7.59;17.91;17.93;0.93;9.21;18.01;0.93;12.07;18.54;7.75;7.81;1.00;7.97;3.23;7.97;7.25;0.01;0.91;1.03;7.20;7.73;19.44;12.69;11.87;8.07;1.05;19.97;19.77;20.89;64.08;64.09;40.03	26	Inborn_genetic_diseases;Intellectual_disability;Koolen-de_Vries_syndrome;Neurodevelopmental_delay;not_specified	DDD:49604;IMH;dgv127e55;dgv128e55;dgv3181n100;esv2422002;esv2762433;nsv516807	17:43574135-44788194;17:43655786-44366714;17:44004973-44811116;17:44094472-44364056;17:44109475-44793283;17:44145590-44364158;17:44165804-44362009;17:44170038-44744285	0.1700	esv2762433	17:43574135-44788194	0.0700				IMH	17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508;17:43662689-44338152;17:43664434-44336296;17:43681870-44318931	0.2252			17:43655786-44366714 IMH;17:44094472-44364056 dgv128e55;17:44145590-44364158 dgv3181n100;17:44163926-44293020 dgv367n27;17:44165339-44211686 1000g;17:44165339-44211686 dgv575e214;17:44165804-44362009 esv2422002;17:44170285-44212803 DDD:49606;17:44176395-44176717 1000g;17:44187493-44214094 dgv937e212;17:44187493-44364056 dgv130e55;17:44194107-44762405 DDD:49611;17:44209763-44267388 DDD:49612;17:44212745-44369562 gnomAD-SV_v2.1_DUP_17_44188;17:44223908-44224221 1000g;17:44230894-44262697 1000g;17:44249111-44320939 DDD:49618;17:44282756-44286423 IMH;	17:43574135-44788194 esv2762433;17:44004973-44811116 dgv127e55;17:44109475-44793283 nsv516807;17:44149791-44248860 DDD:49602;17:44165000-44217000 gnomAD-SV_v2.1_DUP_17_44187;17:44165339-44211686 1000g;17:44165703-44291551 nsv514850;17:44170038-44744285 DDD:49604;17:44175518-44443972 DDD:49608;17:44176859-44397890 DDD:49609;17:44187493-44292742 dgv938e212;17:44187493-44789621 dgv939e212;17:44208145-44764994 esv2760451;17:44212647-44369642 IMH;17:44212825-44276618 dgv943e212;17:44230894-44262697 1000g;17:44230894-44262697 dgv576e214;17:44280980-44369559 DDD:49623;17:44283572-44782177 esv3893020			17:44170285-44212803 DDD:49606;chr17:44176395-44176717 dbVar;chr17:44176407-44176807 dbVar;17:44176859-44397890 DDD:49609;17:44190672-44785015 dgv940e212;chr17:44192997-44193064 dbVar;17:44208145-44764994 esv2760451;chr17:44223760-44224221 dbVar;17:44223908-44224221 1000g;17:44223908-44224221 esv2662030;chr17:44265262-44265312 dbVar;	17:43574135-44788194 esv2762433;17:44176395-44176717 1000g;17:44176395-44176717 esv2675570;17:44176407-44176807 gnomAD-SV_v2.1_DEL_17_160649;chr17:44179666-44182382 dbVar;chr17:44192422-44192507 dbVar;17:44194107-44762405 DDD:49611;17:44212311-44292742 dgv941e212;17:44223760-44224221 gnomAD-SV_v2.1_DEL_17_160652;chr17:44223908-44224221 dbVar;chr17:44256597-44256681 dbVar;chr17:44278890-44279167 dbVar	0.380	0.460			17:44297188-44297495	AluY			17:44164882-44183555	17:44294406-44329730						3		16.23				-0.71959827485963	0.443929223699058							612452			yes		0	9.9972e-01	9.9973e-01	-1.0	1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2E (cf B_gain_source, +0.00);2I-3 (KANSL1, +0.00);3A (2 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)	1
17_44171889_44297143_DUP_1	17	44171889	44297143	125255	DUP		Benign	NA	split	q21.31	KANSL1				NM_001405854	1	44107281	44302125	125255	1431	43	no	16	intron2-intron4	5'UTR-CDS	37	5'	44171888	44297143																								26	Inborn_genetic_diseases;Intellectual_disability;Koolen-de_Vries_syndrome;Neurodevelopmental_delay;not_specified	DDD:49604;IMH;dgv127e55;dgv128e55;dgv3181n100;esv2422002;esv2762433;nsv516807	17:43574135-44788194;17:43655786-44366714;17:44004973-44811116;17:44094472-44364056;17:44109475-44793283;17:44145590-44364158;17:44165804-44362009;17:44170038-44744285	0.1700	esv2762433	17:43574135-44788194	0.0700				IMH	17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508;17:43662689-44338152;17:43664434-44336296;17:43681870-44318931	0.2252																								3	0	16.23				-0.71959827485963	0.443929223699058	Koolen-de Vries syndrome;Koolen-de Vries syndrome due to a point mutation	AD	Definitive;Strong;Supportive	22544363;22544363[PMID]_22544367[PMID]_20301783[PMID];22544367	284058	HGNC:24565	612452	Koolen-De Vries syndrome, 610443 (3) AD	AD	yes		0	9.9972e-01	9.9973e-01			full=1
17_44171889_44297143_DUP_1	17	44171889	44297143	125255	DUP		Benign	NA	split	q21.31	KANSL1-AS1				NR_034172	1	44270938	44274089	3151	0	0	NA	2	txStart-txEnd	UTR			44270938	44274089																										DDD:49604;DDD:49608;DDD:49609;DDD:49611;DDD:49618;IMH;dgv127e55;dgv128e55;dgv130e55;dgv3181n100;dgv367n27;dgv938e212;dgv939e212;dgv943e212;esv2422002;esv2760451;esv2762433;gnomAD-SV_v2.1_DUP_17_44188;nsv514850;nsv516807	17:43574135-44788194;17:43655786-44366714;17:44004973-44811116;17:44094472-44364056;17:44109475-44793283;17:44145590-44364158;17:44163926-44293020;17:44165703-44291551;17:44165804-44362009;17:44170038-44744285;17:44175518-44443972;17:44176859-44397890;17:44187493-44292742;17:44187493-44364056;17:44187493-44789621;17:44194107-44762405;17:44208145-44764994;17:44212647-44369642;17:44212745-44369562;17:44212825-44276618;17:44249111-44320939	0.5406	DDD:49609;DDD:49611;dgv940e212;dgv941e212;esv2760451;esv2762433	17:43574135-44788194;17:44176859-44397890;17:44190672-44785015;17:44194107-44762405;17:44208145-44764994;17:44212311-44292742	0.2994				IMH	17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508;17:43662689-44338152;17:43664434-44336296;17:43681870-44318931;17:43702611-44296817	0.2252																																				644246	HGNC:43740											full=1
2_242865921_243028452_DEL_1	2	242865921	243028452	-162532	DEL		Benign	NA	full	q37.3	LINC01237;LINC01238;LOC285097;LINC01880	FAM240C	LINC03100	4																AGXT (morbid/RE=ABC_enhancer);D2HGDH (morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer);DTYMK (morbid/RE=ABC_enhancer+EA_enhancer)															dbVar:nssv17976961;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv16254741;dbVar:nssv15147151;dbVar:nssv15147318;dbVar:nssv15146760;dbVar:nssv15121191;dbVar:nssv15134347;dbVar:nssv15120707;dbVar:nssv8639299	2:2-243199373;2:14239-243048760;2:15673-243101834;2:178397960-243007457;2:189682922-243007359;2:211444401-243059659;2:218966483-243059659;2:228667865-243028452;2:236177413-243059659;2:236472309-243028452;2:239873382-243006013	0.07;0.07;0.07;0.22;0.27;0.51;0.67;1.13;2.36;2.48;4.47	2q37.3 terminal region (includes HDAC4)		dbVar:nssv15124851;dbVar:nssv15132233;nssv15140017;dbVar:nssv16296940;dbVar:nssv15139807;dbVar:nssv15126959;dbVar:nssv15121136;dbVar:nssv15120661;dbVar:nssv15121139;dbVar:nssv15132363;dbVar:nssv15121140;dbVar:nssv15134903;dbVar:nssv15122404;dbVar:nssv15133611;dbVar:nssv15120667;dbVar:nssv16865882;dbVar:nssv15137653;dbVar:nssv15132686;dbVar:nssv17976287;dbVar:nssv15136836;dbVar:nssv15133934;dbVar:nssv15133750;dbVar:nssv15163370;dbVar:nssv15134792;dbVar:nssv15133170;dbVar:nssv15132355;dbVar:nssv15605955;dbVar:nssv15137339;dbVar:nssv15605956;dbVar:nssv18326326;dbVar:nssv15136036;dbVar:nssv15755694;HI3:ISCA-37394;dbVar:nssv15121144;dbVar:nssv15135054;dbVar:nssv15133743;dbVar:nssv15135857;dbVar:nssv15120673;dbVar:nssv15133620;dbVar:nssv15122695;dbVar:nssv15163383;dbVar:nssv16207882;dbVar:nssv15141519;dbVar:nssv15121145	2:50886433-243102476;2:232634990-243059659;2:233110453-243028452;2:233784244-243040217;2:233891214-243068334;2:233995841-243028452;2:234362258-243041306;2:235081181-243028452;2:235254487-243059659;2:235576804-243059659;2:235744425-243007359;2:235937074-243008259;2:236177413-243007359;2:236649724-242974607;2:237201757-243048760;2:237322366-243059659;2:237463877-243059659;2:237619066-243048655;2:237684406-243059659;2:237875407-243007359;2:237943120-243007359;2:238037760-243101834;2:238140848-243007359;2:238434828-242938241;2:238552640-243059659;2:238795603-242918203;2:238811513-243059659;2:239071624-243048760;2:239229305-243199373;2:239742161-243059659;2:239894073-243048760;2:239954694-242930600;2:241006624-243028452;2:241006624-243059659;2:241110555-243007359;2:241127319-243059659;2:241384237-243028452;2:241446569-243007359;2:241610649-243034277;2:241847590-243101834;2:242011634-243199373;2:242045570-243040217;2:242188711-243028452	0.08;1.56;1.64;1.76;1.77;1.80;1.87;2.05;2.08;2.17;1.95;2.01;2.07;1.72;2.78;2.83;2.90;2.99;3.02;2.76;2.79;3.21;2.91;1.61;3.61;1.27;3.83;4.09;4.09;4.90;5.15;2.17;8.04;7.92;7.46;8.41;9.89;9.06;11.42;12.96;13.68;16.34;19.35						DDD:9221;DDD:9222;IMH;dbVar;gnomAD-SV_v2.1_DEL_2_28790	2:242849685-243064401;chr2:242852582-243035504;chr2:242853252-243035778;2:242853252-243035778;2:242853253-243035778;2:242853253-243035778	0.0686									2:242930601-243102476 TS40:ISCA-37470;2:242988770-243037176 dgv768e214;2:243027554-243069648 dgv769e214;	2:242869276-242871593 IMH;2:242988770-243037176 1000g;2:243027554-243069648 1000g;2:243028400-243028975 nsv514985			2:242702555-243025545 DDD:9211;chr2:242851168-242874365 dbVar;2:242851169-242874365 esv3594848;chr2:242852582-243035504 dbVar;2:242852907-242902712 1000g;chr2:242853243-243019021 dbVar;2:242853244-243019021 esv3594850;2:242853252-243035778 gnomAD-SV_v2.1_DEL_2_28790;2:242853253-243035778 IMH;chr2:242860574-242892107 dbVar;2:242860575-242892107 esv3594851;2:242872863-243012181 HI40:ISCA-46585;chr2:242878551-242885258 dbVar;2:242881805-242896360 1000g;2:242881806-242896359 DDD:9229;chr2:242888545-242889711 dbVar;2:242890092-242926595 1000g;chr2:242895812-242954423 dbVar;2:242898343-242898462 1000g;chr2:242912279-242912530 dbVar...	2:242516106-243014630 dgv165e55;2:242849685-243064401 DDD:9221;2:242851169-242874365 1000g;chr2:242852582-242959025 dbVar;chr2:242852906-242902712 dbVar;2:242852907-242902712 esv3594849;2:242853244-243019021 1000g;chr2:242853252-243035778 dbVar;2:242853253-243035778 DDD:9222;chr2:242854838-242867434 dbVar;2:242860575-242892107 1000g;2:242867313-242921118 DDD:9226;chr2:242874439-243024795 dbVar;chr2:242881804-242896360 dbVar;2:242881805-242896360 esv3594852;chr2:242887570-243070660 dbVar;chr2:242890091-242926595 dbVar;2:242890092-242926595 esv3594853;chr2:242898332-242898462 dbVar;chr2:242898343-242898462 dbVar...	0.400	0.460								2:243007680-243062019																												-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (4 genes, +0.00);5F (+0.00)	1
2_242865921_243028452_DEL_1	2	242865921	243028452	-162532	DEL		Benign	NA	split	q37.3	LINC01237				NR_110220	1	242823513	243020873	154953	0	0	NA	4	intron2-txEnd	UTR	41134	5'	242865920	243020873																													DDD:9211;DDD:9221;DDD:9222;IMH;dbVar;gnomAD-SV_v2.1_DEL_2_28790	2:242702555-243025545;2:242849685-243064401;chr2:242852582-243035504;chr2:242853252-243035778;2:242853252-243035778;2:242853253-243035778;2:242853253-243035778	0.0686																																										101927289	HGNC:49793											full=1
2_242865921_243028452_DEL_1	2	242865921	243028452	-162532	DEL		Benign	NA	split	q37.3	LINC01238				NR_110592	1	242912833	242919427	6594	0	0	NA	6	txStart-txEnd	UTR			242912833	242919427																													1000g;DDD:9211;DDD:9221;DDD:9222;DDD:9226;HI40:ISCA-46585;IMH;dbVar;dgv165e55;esv3594850;esv3594853;gnomAD-SV_v2.1_DEL_2_28790	2:242516106-243014630;2:242702555-243025545;2:242849685-243064401;chr2:242852582-242959025;chr2:242852582-243035504;chr2:242853243-243019021;2:242853244-243019021;2:242853244-243019021;chr2:242853252-243035778;2:242853252-243035778;2:242853253-243035778;2:242853253-243035778;2:242867313-242921118;2:242872863-243012181;chr2:242874439-243024795;chr2:242887570-243070660;chr2:242890091-242926595;2:242890092-242926595;2:242890092-242926595;chr2:242895812-242954423	0.0686																																										101927289	HGNC:49793											full=1
2_242865921_243028452_DEL_1	2	242865921	243028452	-162532	DEL		Benign	NA	split	q37.3	LOC285097				NR_149023	1	242943359	242948164	4805	0	0	NA	1	txStart-txEnd	UTR			242943359	242948164																										TS40:ISCA-37470	2:242930601-243102476		1000g;DDD:9211;DDD:9221;DDD:9222;DDD:9231;DDD:9235;HI40:ISCA-37470;HI40:ISCA-46585;IMH;dbVar;dgv165e55;dgv167e55;dgv4203n100;dgv498n27;dgv90e203;esv3594850;esv3594855;gnomAD-SV_v2.1_DEL_2_28790	2:242516106-243014630;2:242702555-243025545;2:242849685-243064401;chr2:242852582-242959025;chr2:242852582-243035504;chr2:242853243-243019021;2:242853244-243019021;2:242853244-243019021;chr2:242853252-243035778;2:242853252-243035778;2:242853253-243035778;2:242853253-243035778;2:242872863-243012181;chr2:242874439-243024795;chr2:242887570-243070660;chr2:242895812-242954423;2:242915455-243049013;2:242915467-243089456;2:242917307-243044147;chr2:242918208-242948232;2:242918249-243014630;chr2:242919210-242952227;2:242919211-242952227;2:242919211-242952227;2:242919289-242952148;2:242922232-243083979;2:242930601-243102476;chr2:242933537-242959025;chr2:242936128-242980024;chr2:242938726-242952779;chr2:242941934-242955439	0.0804																																																						full=1
2_242865921_243028452_DEL_1	2	242865921	243028452	-162532	DEL		Benign	NA	split	q37.3	LINC01880				NR_146651	1	242989834	243026289	36455	0	0	NA	4	txStart-txEnd	UTR			242989834	243026289																										1000g;TS40:ISCA-37470;dgv768e214	2:242930601-243102476;2:242988770-243037176;2:242988770-243037176	0.0951	1000g;DDD:9221;DDD:9222;DDD:9235;HI40:ISCA-37470;IMH;dbVar;dgv4203n100;dgv498n27;dgv90e203;esv3594857;esv3594864;gnomAD-SV_v2.1_DEL_2_28790	2:242849685-243064401;chr2:242852582-243035504;chr2:242853252-243035778;2:242853252-243035778;2:242853253-243035778;2:242853253-243035778;chr2:242887570-243070660;2:242915455-243049013;2:242915467-243089456;2:242917307-243044147;2:242922232-243083979;2:242930601-243102476;chr2:242944058-243035710;2:242944059-243035710;2:242944059-243035710;chr2:242988769-243037176;2:242988770-243037176;2:242988770-243037176	0.0804																																										105373979	HGNC:52699											full=1
3_195419169_195472855_DEL_1	3	195419169	195472855	-53687	DEL		Benign	NA	full	q29	MIR570HG;MIR570;MUC20	SDHAP2	MUC4	3																ABCB7 (morbid/RE=mTL_miRNA);ABHD5 (morbid/RE=mTL_miRNA);ADAM22 (morbid/RE=mTL_miRNA);ANXA11 (morbid/RE=mTL_miRNA);ARL6IP1 (morbid/RE=mTL_miRNA);ATP6V1B2 (morbid/RE=mTL_miRNA);BICD2 (morbid/RE=mTL_miRNA);BLOC1S6 (morbid/RE=mTL_miRNA);BTD (morbid/RE=mTL_miRNA);CALM1 (morbid/RE=mTL_miRNA);CALM3 (morbid/RE=mTL_miRNA);CAVIN1 (morbid/RE=mTL_miRNA);CBFB (morbid/RE=mTL_miRNA);CCDC115 (morbid/RE=mTL_miRNA);CDKN1B (HI=3/morbid/RE=mTL_miRNA);CHD1 (morbid/RE=mTL_miRNA);CHSY1 (morbid/RE=mTL_miRNA);CLCN3 (morbid/RE=mTL_miRNA);CRTAP (morbid/RE=mTL_miRNA);CSNK2A1 (morbid/RE=mTL_miRNA);DDHD1 (morbid/RE=mTL_miRNA);ELOVL5 (morbid/RE=mTL_miRNA);EPG5 (morbid/RE=mTL_miRNA);ESCO2 (morbid/RE=mTL_miRNA);EXOC2 (morbid/RE=mTL_miRNA);FBXW7 (morbid/RE=mTL_miRNA);FTH1 (morbid/RE=mTL_miRNA);GDF6 (morbid/RE=mTL_miRNA);GSR (morbid/RE=mTL_miRNA);HNRNPA2B1 (morbid/RE=mTL_miRNA);IGF1R (HI=3/morbid/RE=mTL_miRNA);IL6R (morbid/RE=mTL_miRNA);IREB2 (morbid/RE=mTL_miRNA);KCNB1 (morbid/RE=mTL_miRNA);KLHL15 (morbid/RE=mTL_miRNA);KREMEN1 (morbid/RE=mTL_miRNA);LEMD2 (morbid/RE=mTL_miRNA);MRPL3 (morbid/RE=mTL_miRNA);MYO1C (morbid/RE=mTL_miRNA);NDRG1 (morbid/RE=mTL_miRNA);NDUFA12 (morbid/RE=mTL_miRNA);P3H2 (morbid/RE=mTL_miRNA);PAX2 (HI=3/morbid/RE=mTL_miRNA);PCYT1A (morbid/RE=GH_promoter_enhancer);PEX2 (morbid/RE=mTL_miRNA);PGK1 (morbid/RE=mTL_miRNA);PHF6 (HI=3/morbid/RE=mTL_miRNA);RAC1 (morbid/RE=mTL_miRNA);RNF168 (morbid/RE=GH_enhancer+GH_promoter_enhancer);SAMD12 (morbid/RE=mTL_miRNA)...															dbVar:nssv15162889;dbVar:nssv15164144;dbVar:nssv15149891;nssv15151839;dbVar:nssv15148025;dbVar:nssv15146977;dbVar:nssv15145927;dbVar:nssv15147555;dbVar:nssv15147518;dbVar:nssv15145707;dbVar:nssv15149548;dbVar:nssv15148262;dbVar:nssv15146719;dbVar:nssv18326383;dbVar:nssv15164224;dbVar:nssv15147464;dbVar:nssv15148839;dbVar:nssv15142547;dbVar:nssv15153539;dbVar:nssv17976740;dbVar:nssv15153542;dbVar:nssv15153544;dbVar:nssv15164241;dbVar:nssv15152868;dbVar:nssv15755821;dbVar:nssv15146377;dbVar:nssv15146980;dbVar:nssv15153546;dbVar:nssv15145873;dbVar:nssv15149008;dbVar:nssv15145905;dbVar:nssv15146981;dbVar:nssv16254509;dbVar:nssv16736615;dbVar:nssv15148110	3:60175-197948027;3:61496-197838262;3:61893-197851986;3:103145727-197837049;3:147239680-197823436;3:151818302-197845254;3:155836231-197851986;3:156039668-197840323;3:157011168-197861598;3:158980632-197766890;3:165854998-197851986;3:167885357-197837049;3:171549422-198022430;3:173281267-197838262;3:175886314-197845254;3:176157700-197845254;3:177246494-197837049;3:182539235-197851986;3:183498521-197851986;3:184003968-197851986;3:186374366-197851986;3:186374672-197838262;3:187913568-197851986;3:188386567-197838262;3:188983161-197837049;3:190385453-197837049;3:191593620-197851986;3:192470727-197845254;3:193422395-197851986;3:194013987-197837069;3:194145226-197895629;3:195068029-197851986;3:195419169-197387258;3:195438670-197837049	0.03;0.03;0.03;0.06;0.11;0.12;0.13;0.13;0.13;0.14;0.17;0.18;0.20;0.22;0.24;0.25;0.26;0.35;0.37;0.39;0.47;0.47;0.54;0.57;0.61;0.72;0.86;1.00;1.21;1.40;1.43;1.93;2.73;1.43			dbVar:nssv15146266;dbVar:nssv15128822;dbVar:nssv15165459;dbVar:nssv17955845;dbVar:nssv17955930;dbVar:nssv15145831	3:185203638-197837049;3:185599935-196462295;3:189101447-197838262;3:189608637-197532175;3:191866467-197842171;3:194059264-197420612	0.42;0.49;0.61;0.68;0.90;1.60			DDD:12528;TS40:ISCA-46592;esv2760775;esv2763776	3:195240825-195502119;3:195376589-195493533;3:195383143-195502119;3:195385823-195474165	0.0300	DDD:12528;esv2760775;esv2763776	3:195240825-195502119;3:195383143-195502119;3:195385823-195474165	0.0300				IMH	3:195371562-197367616;3:195376259-197363816;3:195409822-195693354;3:195413625-195689159;3:195417390-195684632;3:195418302-195683569	0.1142			3:195320057-195470538 DDD:12519;3:195383143-195502119 esv2760775;3:195417631-195471708 DDD:12530;3:195417836-195445776 1000g;3:195417836-195445776 1000g;3:195428197-195442889 nsv515001;3:195452013-195457240 1000g;3:195454692-195475463 DDD:12537;3:195457142-195468593 1000g;3:195457142-195468593 dgv969e214	3:195240825-195502119 esv2763776;3:195376589-195493533 TS40:ISCA-46592;3:195385823-195474165 DDD:12528;3:195417836-195445776 1000g;3:195417836-195445776 1000g;3:195417836-195445776 dgv967e214;3:195452013-195457240 1000g;3:195452013-195457240 dgv968e214;3:195457000-195471300 gnomAD-SV_v2.1_DUP_3_10621;3:195457142-195468593 1000g			3:195320057-195470538 DDD:12519;3:195383131-195446910 dgv5017n100;3:195385823-195474165 DDD:12528;chr3:195425199-195425686 dbVar;3:195454692-195475463 DDD:12537;3:195457142-195471062 dgv970e214;chr3:195457317-195471062 dbVar;chr3:195463643-195463762 dbVar	3:195240825-195502119 esv2763776;3:195380279-195469564 HI40:ISCA-46589;3:195383143-195502119 esv2760775;3:195417631-195471708 DDD:12530;chr3:195451991-195452447 dbVar;chr3:195457141-195468593 dbVar;3:195457249-195471074 dgv906e199;3:195457318-195471062 1000g	0.470	0.415	3:195418975-195419071	MER3					3:195413607-195420395		3:195341901-195476900	High Signal Region	3:195341901-195476900	High Signal Region				95.22																	6	4.7211e-03		-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (3 genes, +0.00);5F (+0.00)	1
3_195419169_195472855_DEL_1	3	195419169	195472855	-53687	DEL		Benign	NA	split	q29	MIR570HG				NR_122105	1	195415368	195438746	19578	0	0	NA	5	intron2-txEnd	UTR	2859	5'	195419168	195438746																										1000g;DDD:12519;DDD:12528;DDD:12530;TS40:ISCA-46592;dgv967e214;esv2760775;esv2763776	3:195240825-195502119;3:195320057-195470538;3:195376589-195493533;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776	0.4682	DDD:12519;DDD:12528;DDD:12530;HI40:ISCA-46589;dgv5017n100;esv2760775;esv2763776	3:195240825-195502119;3:195320057-195470538;3:195380279-195469564;3:195383131-195446910;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708	0.0746				IMH	3:195371562-197367616;3:195376259-197363816;3:195409822-195693354;3:195413625-195689159;3:195417390-195684632;3:195418302-195683569	0.1142																																				440993	HGNC:53743											full=1
3_195419169_195472855_DEL_1	3	195419169	195472855	-53687	DEL		Benign	NA	split	q29	MIR570				NR_030296	1	195426271	195426368	97	0	0	NA	1	txStart-txEnd	UTR			195426271	195426368																										1000g;DDD:12519;DDD:12528;DDD:12530;TS40:ISCA-46592;dgv967e214;esv2760775;esv2763776	3:195240825-195502119;3:195320057-195470538;3:195376589-195493533;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776	0.4682	DDD:12519;DDD:12528;DDD:12530;HI40:ISCA-46589;dgv5017n100;esv2760775;esv2763776	3:195240825-195502119;3:195320057-195470538;3:195380279-195469564;3:195383131-195446910;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708	0.0746				IMH	3:195371562-197367616;3:195376259-197363816;3:195409822-195693354;3:195413625-195689159;3:195417390-195684632;3:195418302-195683569	0.1142																																				693155	HGNC:32826											full=1
3_195419169_195472855_DEL_1	3	195419169	195472855	-53687	DEL		Benign	NA	split	q29	MUC20				NM_001282506	2	195447848	195460422	12574	2130	100	no	4	txStart-txEnd	5'UTR-3'UTR			195447848	195460422																										DDD:12519;DDD:12528;DDD:12530;TS40:ISCA-46592;esv2760775;esv2763776	3:195240825-195502119;3:195320057-195470538;3:195376589-195493533;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708	0.0556	DDD:12519;DDD:12528;DDD:12530;HI40:ISCA-46589;esv2760775;esv2763776	3:195240825-195502119;3:195320057-195470538;3:195380279-195469564;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708	0.0746				IMH	3:195371562-197367616;3:195376259-197363816;3:195409822-195693354;3:195413625-195689159;3:195417390-195684632;3:195418302-195683569	0.1142																										95.22										200958	HGNC:23282						6	4.7211e-03				full=1
4_69392546_69462438_DEL_1	4	69392546	69462438	-69893	DEL		Benign	NA	full	q13.2	UGT2B17	TMPRSS11E	UGT2B15	1																															dbVar:nssv15165478;dbVar:nssv15148693;dbVar:nssv15165480;dbVar:nssv15164282;dbVar:nssv15149870;nssv15151360;dbVar:nssv15145710;dbVar:nssv17956560;dbVar:nssv15153593;dbVar:nssv15774461	4:11526-191028879;4:12441-190904441;4:49451-190915650;4:49451-190963766;4:68347-190957473;4:52697789-98426769;4:52866945-143582507;4:64705502-73469716;4:68242785-82991431	0.04;0.04;0.04;0.04;0.04;0.15;0.08;0.80;0.47			dbVar:nssv17173265;dbVar:nssv15165214;dbVar:nssv15125766;dbVar:nssv17969950;dbVar:nssv15141158;dbVar:nssv15132956;dbVar:nssv15132546;dbVar:nssv15137205;dbVar:nssv18830797;dbVar:nssv16207960	4:52757981-76930872;4:58332295-71587615;4:59167246-101910659;4:61867556-74711517;4:66017576-76772947;4:66320281-73179410;4:67708127-71697274;4:68665384-75106637;4:68698774-83637218;4:68950364-79738598	0.29;0.53;0.16;0.54;0.65;1.02;1.75;1.09;0.47;0.65			DDD:13999;dgv1490e212;dgv5262n100;dgv5264n100	4:69360477-69485827;4:69364694-69524016;4:69371992-69489323;4:69371992-69540013	0.4178	1000g;DDD:13999;DDD:14001;DDD:14006;IMH;dbVar;dgv5262n100;dgv951e199;esv2421501;esv3600874;esv3893940;gnomAD-SV_v2.1_DEL_4_46338;nsv514223	4:69364694-69524016;4:69367085-69542363;4:69371992-69489323;4:69372046-69491392;4:69373660-69491275;chr4:69373811-69491113;4:69373811-69491113;4:69374942-69503681;chr4:69375591-69491543;4:69375592-69491543;4:69375592-69491543;4:69380302-69491200;4:69382081-69512905;4:69386966-69483317	0.8518				IMH	4:21758876-84442542;4:32219469-79170284	0.1946			4:69364694-69524016 DDD:13999;4:69371992-69489323 dgv5262n100;4:69435890-69485966 dgv1493e212;	4:69360477-69485827 dgv1490e212;4:69366026-69430178 DDD:14000;4:69371992-69540013 dgv5264n100;4:69435890-69551731 dgv1495e212			4:69364694-69524016 DDD:13999;4:69367085-69542363 DDD:14001;4:69372046-69491392 dgv951e199;chr4:69373747-69423167 dbVar;4:69373748-69423167 esv3600873;4:69373811-69491113 gnomAD-SV_v2.1_DEL_4_46338;4:69374942-69503681 esv2421501;4:69375592-69491543 1000g;4:69380302-69491200 DDD:14006;4:69386966-69483317 nsv514223;4:69426440-69454553 1000g;4:69435890-69485966 dgv1494e212;chr4:69441908-69442050 dbVar;	4:69360489-69396466 DDD:13998;4:69366026-69430178 DDD:14000;4:69371992-69489323 dgv5262n100;4:69373660-69491275 IMH;4:69373748-69423167 1000g;chr4:69373811-69491113 dbVar;4:69374942-69396466 DDD:14004;chr4:69375591-69491543 dbVar;4:69375592-69491543 esv3600874;4:69382081-69512905 esv3893940;chr4:69426439-69454553 dbVar;4:69426440-69454553 esv3600875;4:69435890-69558258 dgv1496e212;chr4:69446429-69446529 dbVar	0.400	0.365	4:69392108-69392544	Tigger2a	4:69462528-69462751	THE1B			4:69370649-69435791									87.45				0.741987855668132	1.6951286981971							601903				yes	5	9.6905e-08	1.0256e-02	-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)	1
4_69392546_69462438_DEL_1	4	69392546	69462438	-69893	DEL		Benign	NA	split	q13.2	UGT2B17				NM_001077	4	69402890	69442040	39150	1593	100	no	7	txStart-txEnd	5'UTR-3'UTR			69402890	69442040																										DDD:13999;dgv1490e212;dgv5262n100;dgv5264n100	4:69360477-69485827;4:69364694-69524016;4:69371992-69489323;4:69371992-69540013	0.4178	1000g;DDD:13999;DDD:14001;DDD:14006;IMH;dbVar;dgv5262n100;dgv951e199;esv2421501;esv3600874;esv3893940;gnomAD-SV_v2.1_DEL_4_46338;nsv514223	4:69364694-69524016;4:69367085-69542363;4:69371992-69489323;4:69372046-69491392;4:69373660-69491275;chr4:69373811-69491113;4:69373811-69491113;4:69374942-69503681;chr4:69375591-69491543;4:69375592-69491543;4:69375592-69491543;4:69380302-69491200;4:69382081-69512905;4:69386966-69483317	0.8518				IMH	4:21758876-84442542;4:32219469-79170284	0.1946																										87.45				0.741987855668132	1.6951286981971					7367	HGNC:12547	601903	(Bone mineral density QTL 12, osteoporosis), 612560 (3)			yes	5	9.6905e-08	1.0256e-02			full=1
6_266080_362290_DEL_1	6	266080	362290	-96211	DEL		Benign	NA	full	p25.3	DUSP22	LINC03066	IRF4	1																EXOC2 (morbid/RE=ABC_enhancer+EA_enhancer+GH_promoter_enhancer);FOXC1 (HI=3/morbid/RE=ABC_enhancer);IRF4 (morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer)															dbVar:nssv15166690;dbVar:nssv15132417;dbVar:nssv15166692;dbVar:nssv15120571;dbVar:nssv17649861;dbVar:nssv15138806;dbVar:nssv15150238;dbVar:nssv15136852;dbVar:nssv15137715;dbVar:nssv15139508;dbVar:nssv15139953;dbVar:nssv15154408;dbVar:nssv15154409;dbVar:nssv15772668;dbVar:nssv15161578;dbVar:nssv15161859;nssv15161868;dbVar:nssv15132517;dbVar:nssv15133942;dbVar:nssv15135449;dbVar:nssv15131978;dbVar:nssv15168255;dbVar:nssv15124407;nssv15153178;dbVar:nssv15124483;dbVar:nssv16255328	6:60108-171054786;6:106432-18360826;6:108667-170980171;6:144958-5239414;6:149620-3951208;6:152635-14417234;6:152635-15732394;6:152635-6027780;6:155808-17058645;6:156975-11551050;6:156975-13081433;6:156975-13502033;6:156975-21955964;6:156975-23221621;6:156975-46757028;6:156976-170919482;6:163084-1951585;6:163084-2029765;6:163084-9525729;6:164361-13340113;6:165633-170919470;6:168776-24023234;6:255351-3189972;6:302184-3290583	0.06;0.53;0.06;1.89;2.53;0.67;0.62;1.64;0.57;0.84;0.74;0.72;0.44;0.42;0.21;0.06;5.38;5.15;1.03;0.73;0.06;0.40;3.28;2.01			dbVar:nssv15127418;dbVar:nssv15133557;dbVar:nssv15168254;dbVar:nssv15134981;dbVar:nssv15135893;dbVar:nssv15139184;dbVar:nssv16254736;dbVar:nssv15139679;dbVar:nssv15151182;dbVar:nssv16208808;dbVar:nssv15152915;dbVar:nssv15137052;dbVar:nssv15142299;dbVar:nssv15138353;dbVar:nssv18330309;dbVar:nssv15133558;dbVar:nssv15134713;dbVar:nssv15132439;dbVar:nssv15132039;dbVar:nssv15133559;dbVar:nssv15132182;dbVar:nssv15132440;dbVar:nssv15137716;dbVar:nssv15125242;dbVar:nssv15141126;dbVar:nssv15124398;dbVar:nssv15124411	6:60524-1768235;6:107683-4979015;6:108667-1505511;6:152635-5315912;6:152635-6027780;6:152635-6290037;6:152850-1888703;6:156975-13856156;6:156975-2030623;6:156975-2208360;6:156975-3398920;6:156975-4907926;6:156975-6417749;6:156975-7122992;6:156976-3718881;6:163084-2724845;6:163084-3459841;6:163084-5875635;6:163084-6063033;6:164634-5823834;6:164634-6284470;6:165676-9036267;6:170427-1622218;6:180960-2180143;6:195230-2117379;6:204010-11608587;6:204010-6447311	5.63;1.98;6.89;1.86;1.64;1.57;5.54;0.70;5.13;4.69;2.97;2.03;1.54;1.38;2.70;3.76;2.92;1.68;1.63;1.70;1.57;1.08;6.63;4.81;5.01;0.84;1.54			DDD:19553;DDD:19555;dgv140e203;nsv514340	6:230528-373346;6:236002-373603;6:257333-380527;6:257354-382897	0.6839	DDD:19555;dbVar;dgv1701e212	chr6:180946-734275;6:236002-373603;6:254255-385771	0.1870									6:236002-373603 DDD:19555;6:253364-302293 dgv1695e212;6:256503-293373 dgv1157e214;6:257354-293393 DDD:19561;6:257354-382897 dgv140e203;6:294125-385771 dgv1705e212;6:305182-340601 1000g;6:305182-340601 dgv1158e214;6:327587-368712 1000g;6:344136-379149 DDD:19570	6:230528-373346 DDD:19553;6:253364-294911 dgv1694e212;6:256503-293373 1000g;6:257333-380527 nsv514340;6:257354-294837 esv2421434;6:259529-339802 TS40:ISCA-37471;6:298701-379015 esv2421645;6:305182-340601 1000g;6:327587-368712 1000g;6:327587-368712 dgv1159e214			6:236002-373603 DDD:19555;6:254255-385771 dgv1701e212;chr6:295586-296060 dbVar;chr6:295710-295782 dbVar;chr6:314312-314882 dbVar;chr6:340942-340994 dbVar;	chr6:180946-734275 dbVar;6:252694-302294 dgv1693e212;6:259529-339802 HI40:ISCA-37471;6:295586-296060 gnomAD-SV_v2.1_DEL_6_65910;chr6:299088-299161 dbVar;chr6:329960-330054 dbVar;chr6:340943-340994 dbVar	0.365	0.315	6:266156-266836	L1MC3	6:362320-362381	MIRc					6:256601-382800	High Signal Region	6:256601-382800	High Signal Region				38.68				-1.35330421932959	-0.982727799381157												5	9.3421e-03	4.3071e-03	-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)	1
6_266080_362290_DEL_1	6	266080	362290	-96211	DEL		Benign	NA	split	p25.3	DUSP22				NM_001286555	3	292486	351355	58869	618	100	no	7	txStart-txEnd	5'UTR-3'UTR			292486	351355																										DDD:19553;DDD:19555;dgv140e203;nsv514340	6:230528-373346;6:236002-373603;6:257333-380527;6:257354-382897	0.6839	DDD:19555;dbVar;dgv1701e212	chr6:180946-734275;6:236002-373603;6:254255-385771	0.1870																																38.68				-1.35330421932959	-0.982727799381157					56940	HGNC:16077						5	9.3421e-03	4.3071e-03			full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	full	p23.1	FAM66B;DEFB109B;USP17L1;USP17L4;ZNF705G;DEFB4B;DEFB103B;SPAG11B;DEFB104B;DEFB106B;DEFB105B;DEFB107B;PRR23D1;FAM90A7;FAM90A22;FAM90A23;FAM90A14;FAM90A18;FAM90A16;FAM90A8;FAM90A17;FAM90A19;FAM90A9;FAM90A10;PRR23D2;DEFB107A;DEFB105A;DEFB106A;DEFB104A;SPAG11A;DEFB103A;DEFB4A	FAM90A20	ZNF705B	32																MCPH1 (morbid/RE=ABC_enhancer+GH_promoter_enhancer)															dbVar:nssv15169207;dbVar:nssv15128680;dbVar:nssv15161508;dbVar:nssv15161747;dbVar:nssv17976867;dbVar:nssv17957391;dbVar:nssv15154583;dbVar:nssv15161801;nssv15777239;nssv17976962;dbVar:nssv15154584;dbVar:nssv16206921;dbVar:nssv15154580;dbVar:nssv15161417;nssv15161657;dbVar:nssv15147671;dbVar:nssv15161846;dbVar:nssv15150473;dbVar:nssv15127651;dbVar:nssv15149098;dbVar:nssv15169210;dbVar:nssv15154582;dbVar:nssv15146537;dbVar:nssv15161807;dbVar:nssv15161553;dbVar:nssv15161105;dbVar:nssv15161095;dbVar:nssv15161561;dbVar:nssv15161078;dbVar:nssv15147455;dbVar:nssv16736635;dbVar:nssv15161269;dbVar:nssv15161748;dbVar:nssv15161749;dbVar:nssv15143576;dbVar:nssv15161775;dbVar:nssv15146180;dbVar:nssv15161087;dbVar:nssv15161068;dbVar:nssv15161792;dbVar:nssv15606063;dbVar:nssv15151542;dbVar:nssv15161084;dbVar:nssv16206931;dbVar:nssv15154577;dbVar:nssv15161089;dbVar:nssv15151538;dbVar:nssv15152254;dbVar:nssv18842054;dbVar:nssv15161540;dbVar:nssv15161727;dbVar:nssv15161764	8:10214-146293414;8:13939-146304022;8:46311-11879315;8:46311-30472220;8:158049-10348413;8:158049-11936107;8:158049-13974319;8:158049-146295771;8:158049-15423270;8:158049-8102819;8:158049-9750676;8:158050-146295771;8:158992-13304906;8:158992-146280828;8:158992-17536147;8:163683-46938942;8:164985-11860845;8:164985-146293414;8:168484-13147575;8:169854-10022996;8:176453-12556063;8:176453-12570496;8:176453-146294098;8:176453-16137655;8:176453-34349408;8:176453-37879246;8:176453-7838959;8:176815-43396776;8:191531-146274835;8:191531-146280020;8:191531-17536206;8:191531-22404983;8:191531-23055911;8:191531-7752586;8:191606-146280167;8:191606-24514484;8:191606-30948590;8:194618-13947374;8:1825201-24533193;8:6961184-12157391;8:6999220-11895232;8:6999220-11898980;8:6999220-38553064;8:6999220-8881836;8:7053187-11805960;8:7080282-12045269;8:7169491-12404062;8:7268820-12039974;8:7691902-12039974	0.40;0.40;4.94;1.92;5.73;4.96;4.23;0.40;3.83;7.35;6.09;0.40;4.44;0.40;3.36;1.25;4.99;0.40;4.50;5.93;4.72;4.71;0.40;3.66;1.71;1.55;7.62;1.35;0.40;0.40;3.37;2.63;2.55;7.71;0.40;2.40;1.90;4.25;2.57;11.24;11.93;11.92;1.85;31.03;12.29;11.76;11.16;10.16;1.42			dbVar:nssv15168702;dbVar:nssv15169206;dbVar:nssv18842057;dbVar:nssv17956019;dbVar:nssv15154581;dbVar:nssv18326425;dbVar:nssv15149861;dbVar:nssv15775686;dbVar:nssv17976739;dbVar:nssv16208166;dbVar:nssv15774257;dbVar:nssv15149509;dbVar:nssv18330306;dbVar:nssv18329623;dbVar:nssv16216869;dbVar:nssv15169209;dbVar:nssv15223191;dbVar:nssv15147275;dbVar:nssv15148964;dbVar:nssv15147296;dbVar:nssv15146181;nssv15146816;dbVar:nssv15606064;dbVar:nssv15146660;dbVar:nssv18841910;dbVar:nssv15161264;nssv15161582;dbVar:nssv15145917;dbVar:nssv15161283;dbVar:nssv15161284;dbVar:nssv15161070;dbVar:nssv15141976;dbVar:nssv15161050	8:10214-10197718;8:10214-8948469;8:10502-11142629;8:10502-7214947;8:158049-10939681;8:158049-11281408;8:158049-13309069;8:158049-14214722;8:158049-30187456;8:158049-9025197;8:158049-9393052;8:158049-9749574;8:158050-10965627;8:158050-18936715;8:161517-11516619;8:164985-10007227;8:176815-7753583;8:191531-10049105;8:191531-10315994;8:191531-10724642;8:191531-7752586;8:194618-7787444;8:360370-7334625;8:399894-23712417;8:2292236-27361796;8:3791728-11384448;8:7053187-12241152;8:7092360-12372324;8:7169491-12404062;8:7268820-11805960;8:7268820-11819316	5.73;6.53;5.25;0.63;5.42;5.25;4.44;4.16;1.95;6.59;6.32;6.09;5.40;3.11;5.14;5.93;7.71;5.93;5.77;5.55;7.71;7.69;2.37;2.51;2.33;7.69;11.26;11.06;11.16;10.68;10.65			DDD:26674;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237									8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 TS40:ISCA-37472;8:7170611-7177489 nsv515099;8:7201176-7392220 DDD:26689;8:7212583-7227421 1000g;8:7212583-7227421 TS40:ISCA-46631;8:7241528-7403182 nsv515100;8:7308244-7308706 DDD:26704;8:7632945-7856630 DDD:26727;8:7717878-7717938 DDD:26737;8:7734213-7856702 DDD:26743;8:7737000-7743100 gnomAD-SV_v2.1_DUP_8_23708;8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 TS40:ISCA-37472;8:7170611-7177489 nsv515099;8:7201176-7392220 DDD:26689;8:7212583-7227421 1000g;8:7212583-7227421 TS40:ISCA-46631...	8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;8:7154889-7213289 DDD:26682;8:7190891-7190961 DDD:26685;8:7212583-7227421 1000g;8:7212583-7227421 1000g;8:7212583-7227421 dgv1365e214;8:7250369-7832042 dgv6936n100;8:7401394-7472190 DDD:26720;8:7634705-7829839 DDD:26729;8:7718891-7784263 DDD:26742;8:7737000-7743100 TS40:ISCA-46381;8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;8:7154889-7213289 DDD:26682;8:7190891-7190961 DDD:26685;8:7212583-7227421 1000g;8:7212583-7227421 1000g...			8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 HI40:ISCA-37472;8:7154889-7213289 DDD:26682;8:7158202-7189800 DDD:26683;chr8:7179582-7191032 dbVar;8:7179583-7191032 esv3616115;8:7190891-7190961 DDD:26685;chr8:7201000-7206400 dbVar;chr8:7204184-7204308 dbVar;8:7212583-7227421 1000g;chr8:7221359-7221602 dbVar;8:7228000-7235000 gnomAD-SV_v2.1_DEL_8_89335;chr8:7286205-7286328 dbVar;chr8:7326402-7326559 dbVar;8:7355000-7363000 gnomAD-SV_v2.1_DEL_8_89340;8:7355294-7364762 1000g;8:7401394-7472190 DDD:26720;8:7402900-7419700 gnomAD-SV_v2.1_DEL_8_89341;8:7405950-7443050 gnomAD-SV_v2.1_DEL_8_89342...	8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;chr8:7085462-7537934 dbVar;8:7158046-7189992 esv2675221;chr8:7175745-7175870 dbVar;8:7179583-7191032 1000g;chr8:7180382-7180743 dbVar;8:7190892-7196288 DDD:26687;8:7201000-7206400 gnomAD-SV_v2.1_DEL_8_89332;chr8:7212582-7227421 dbVar;8:7212583-7227421 esv3616116;chr8:7228000-7235000 dbVar;chr8:7276552-7277128 dbVar;8:7308244-7308706 DDD:26704;chr8:7355000-7363000 dbVar;chr8:7355293-7364762 dbVar;8:7355294-7364762 esv3616120;chr8:7402900-7419700 dbVar;chr8:7405950-7443050 dbVar...	0.260	0.330							8:7150797-7184572;8:7150797-7195814;8:7150797-7200543;8:7150798-7238459	8:7600001-7825413	8:7012601-8066200	High Signal Region	8:7012601-8066200	High Signal Region				99.72				2.14121257165536	2.19863945242443												8	4.2180e-01	5.1947e-01	-1.0	1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2E (cf B_gain_source, +0.00);2L (DEFB4A/FAM66B, +0.00);3A (32 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)	1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM66B				NR_027423	2	7156265	7212885	43395	0	0	NA	7	txStart-intron6	UTR	9797	3'	7169490	7212885																										DDD:26670;DDD:26674;DDD:26675;DDD:26682;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7154889-7213289	0.2355	DDD:26670;DDD:26674;DDD:26675;DDD:26682;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934;8:7154889-7213289	0.2237																																										100128890	HGNC:28890											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB109B				NM_001037380	2	7170243	7177618	7375	264	100	no	2	txStart-txEnd	5'UTR-3'UTR			7170243	7177618																										DDD:26670;DDD:26674;DDD:26675;DDD:26682;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7154889-7213289	0.2355	DDD:26670;DDD:26674;DDD:26675;DDD:26682;DDD:26683;HI40:ISCA-37472;dbVar;esv2675221;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934;8:7154889-7213289;8:7158046-7189992;8:7158202-7189800	0.2237																																										641517	HGNC:33469											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	USP17L1				NM_001256873	1	7189908	7191501	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			7189908	7191501																										DDD:26670;DDD:26674;DDD:26675;DDD:26682;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7154889-7213289	0.2355	DDD:26670;DDD:26674;DDD:26675;DDD:26682;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934;8:7154889-7213289	0.2237																																										401447	HGNC:37182											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	USP17L4				NM_001256874	1	7194636	7196229	1593	1593	100	no	1	txStart-txEnd	5'UTR-3'UTR			7194636	7196229																										DDD:26670;DDD:26674;DDD:26675;DDD:26682;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7154889-7213289	0.2355	DDD:26670;DDD:26674;DDD:26675;DDD:26682;DDD:26687;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:6985776-7230992;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934;8:7154889-7213289;8:7190892-7196288	0.2237																																										645402	HGNC:37176											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	ZNF705G				NM_001164457	3	7213038	7243080	30042	903	100	no	7	txStart-txEnd	5'UTR-3'UTR			7213038	7243080																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																91.1				-1.59751875296103	-3.97736276921453					100131980	HGNC:37134						9	1.6471e-08	4.2486e-09			full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB4B				NM_001205266	2	7272376	7274385	2009	195	100	no	2	txStart-txEnd	5'UTR-3'UTR			7272376	7274385																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																99.72										100289462	HGNC:30193						9	6.7977e-02				full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB103B				NM_018661	4	7286409	7287870	1461	204	100	no	2	txStart-txEnd	5'UTR-3'UTR			7286409	7287870																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																85.97										55894	HGNC:31702											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	SPAG11B				NM_058201	4	7308124	7321064	12940	402	100	no	3	txStart-txEnd	5'UTR-3'UTR			7308124	7321064																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																89.4				2.14121257165536	1.8677219993927					10407	HGNC:14534						9	2.7751e-02	4.7238e-02			full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB104B				NM_001040702	1	7327829	7332604	4775	219	100	no	2	txStart-txEnd	5'UTR-3'UTR			7327829	7332604																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																95.66										503618	HGNC:26165						9	3.3176e-01				full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB106B				NM_001040704	2	7340025	7343922	3897	198	100	no	2	txStart-txEnd	5'UTR-3'UTR			7340025	7343922																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																93.29										503841	HGNC:28879						9	8.1151e-02				full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB105B				NM_001040703	3	7345200	7347115	1915	237	100	no	3	txStart-txEnd	5'UTR-3'UTR			7345200	7347115																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																90.95										504180	HGNC:29930						9	2.9184e-01				full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB107B				NM_001040705	2	7353432	7366833	13401	213	100	no	2	txStart-txEnd	5'UTR-3'UTR			7353432	7366833																										DDD:26674;DDD:26675;DDD:26689;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7201176-7392220;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																91.71										503614	HGNC:31918											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	PRR23D1				NM_001282479	1	7397148	7399972	2824	840	100	no	4	txStart-txEnd	5'UTR-3'UTR			7397148	7399972																										DDD:26674;DDD:26675;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098;nsv515100	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7241528-7403182;8:7250369-7832042	0.2355	DDD:26674;DDD:26675;HI40:ISCA-37472;dbVar;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934	0.2237																																										100131608	HGNC:49420						8	4.2180e-01				full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM90A7				NM_001397387	1	7414221	7417234	3013	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7414221	7417234																										DDD:26674;DDD:26675;DDD:26720;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;8:7250369-7832042;8:7401394-7472190	0.2355	DDD:26674;DDD:26675;DDD:26720;HI40:ISCA-37472;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89341;gnomAD-SV_v2.1_DEL_8_89342	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7035907-7428513;8:7053187-8130689;chr8:7085462-7537934;8:7401394-7472190;chr8:7402900-7419700;8:7402900-7419700;chr8:7405950-7443050;8:7405950-7443050	0.5803																																										441317	HGNC:32255											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM90A22				NM_001397382	1	7429516	7432528	3012	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7429516	7432528																										DDD:26674;DDD:26720;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7401394-7472190	0.2355	DDD:26674;DDD:26720;HI40:ISCA-37472;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89342	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;chr8:7085462-7537934;8:7401394-7472190;chr8:7405950-7443050;8:7405950-7443050	0.4842																																										645558	HGNC:32270											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM90A23				NM_001397380	1	7437165	7440175	3010	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7437165	7440175																										DDD:26674;DDD:26720;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7401394-7472190	0.2355	DDD:26674;DDD:26720;HI40:ISCA-37472;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89342	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;chr8:7085462-7537934;8:7401394-7472190;chr8:7405950-7443050;8:7405950-7443050	0.4842																																										645572	HGNC:32271											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM90A14				NM_001164452	1	7572964	7575975	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7572964	7575975																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										645651	HGNC:32262											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM90A18				NM_001164451	1	7580612	7583623	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7580612	7583623																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										441326	HGNC:32266											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM90A16				NM_001397396	1	7588260	7591271	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7588260	7591271																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										441323	HGNC:32264											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM90A8				NM_001164450	1	7595908	7598918	3010	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7595908	7598918																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										441324	HGNC:32256											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM90A17				NM_001397391	1	7603555	7606566	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7603555	7606566																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										728746	HGNC:32265											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM90A19				NM_001164449	1	7611203	7614214	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7611203	7614214																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										728753	HGNC:32267											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM90A9				NM_001164448	1	7618851	7621862	3011	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7618851	7621862																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										441327	HGNC:32257											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	FAM90A10				NM_001164447	1	7626498	7629510	3012	1395	100	no	4	txStart-txEnd	5'UTR-3'UTR			7626498	7629510																										DDD:26674;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042	0.2355	DDD:26674;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689	0.2237																																										441328	HGNC:32258											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	PRR23D2				NM_001282478	1	7636112	7638935	2823	840	100	no	4	txStart-txEnd	5'UTR-3'UTR			7636112	7638935																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																										100133251	HGNC:49396											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB107A				NM_001037668	1	7669241	7673238	3997	213	100	no	2	txStart-txEnd	5'UTR-3'UTR			7669241	7673238																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																92.48										245910	HGNC:18086						9	3.2633e-01				full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB105A				NM_152250	3	7678525	7681402	2877	237	100	no	3	txStart-txEnd	5'UTR-3'UTR			7678525	7681402																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																90.61				0.918523398770926	0.00809335391872301					245908	HGNC:18087						8	3.7719e-01	4.3625e-01			full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB106A				NM_152251	4	7682660	7686575	3915	198	100	no	2	txStart-txEnd	5'UTR-3'UTR			7682660	7686575																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																90.45				0.676417083229402	1.6332400949348					245909	HGNC:18088						9	8.5821e-03	4.0931e-01			full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB104A				NM_080389	3	7693957	7698764	4807	219	100	no	2	txStart-txEnd	5'UTR-3'UTR			7693957	7698764																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																96.98				1.33624136747443	2.19863945242443					140596	HGNC:18115						9	9.3748e-02	5.1947e-01			full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	SPAG11A				NM_001395484	1	7705529	7718465	12936	402	100	no	3	txStart-txEnd	5'UTR-3'UTR			7705529	7718465																										DDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630	0.2237																																97.15				0.140072348156658	0.903069021299127					653423	HGNC:33342						9	6.9645e-05	3.9012e-02			full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB103A				NM_001081551	4	7738913	7740185	1272	204	100	no	2	txStart-txEnd	5'UTR-3'UTR			7738913	7740185																										DDD:26674;DDD:26727;DDD:26729;DDD:26742;DDD:26743;TS40:ISCA-37472;TS40:ISCA-46381;dgv6936n100;esv2761169;esv2764098;gnomAD-SV_v2.1_DUP_8_23708	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839;8:7718891-7784263;8:7734213-7856702;8:7737000-7743100;8:7737000-7743100	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;HI40:ISCA-46380;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89353	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630;8:7736500-7764500;chr8:7736500-7764500;8:7736500-7764500	0.3262																																93.4										414325	HGNC:15967											full=1
8_7169491_7753583_DUP_1	8	7169491	7753583	584093	DUP		Benign	NA	split	p23.1	DEFB4A				NM_004942	4	7752198	7754238	1385	58	29	yes	2	txStart-intron1	5'UTR-CDS	412	3'	7752198	7753583																										DDD:26674;DDD:26727;DDD:26729;DDD:26742;DDD:26743;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839;8:7718891-7784263;8:7734213-7856702	0.2355	DDD:26674;DDD:26727;HI40:ISCA-37472;HI40:ISCA-46380;HI40:ISCA-46382;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89353;gnomAD-SV_v2.1_DEL_8_89355	8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630;8:7736500-7764500;chr8:7736500-7764500;8:7736500-7764500;8:7745000-7754100;chr8:7745000-7754100;8:7745000-7754100	0.5182																																97.87				1.12959151611996	0.758429673080804					1673	HGNC:2767						9	1.1637e-03	3.9981e-01			full=1
8_141035364_141061798_DEL_1	8	141035364	141061798	-26435	DEL	DI AR	Pathogenic	NA	full	q24.3	TRAPPC9	C8orf17	PEG13	1																KCNK9 (morbid/RE=ABC_enhancer+GH_enhancer)															dbVar:nssv15169207;dbVar:nssv15128680;dbVar:nssv15161801;nssv15777239;nssv17976962;dbVar:nssv15161417;nssv15161657;dbVar:nssv15161846;dbVar:nssv15169210;dbVar:nssv15161105;dbVar:nssv15161269;dbVar:nssv15161748;dbVar:nssv15161087;dbVar:nssv15161426;dbVar:nssv15161357;dbVar:nssv15777249;dbVar:nssv18326351;dbVar:nssv17970300;dbVar:nssv15161337;dbVar:nssv15161103;dbVar:nssv17977109;dbVar:nssv15161374;dbVar:nssv15161674;dbVar:nssv15161669;dbVar:nssv15161791;dbVar:nssv15161680;dbVar:nssv15161065;dbVar:nssv17976072;dbVar:nssv15161091;dbVar:nssv15161853;dbVar:nssv15161352;dbVar:nssv15161104;dbVar:nssv15161722;dbVar:nssv15161428;dbVar:nssv16208199;dbVar:nssv15162410;dbVar:nssv15773510;dbVar:nssv15774288;dbVar:nssv15161330;dbVar:nssv15161750;dbVar:nssv16206976;dbVar:nssv15161266;dbVar:nssv17970325;dbVar:nssv15131822;dbVar:nssv18841906;dbVar:nssv15161331;dbVar:nssv15143620;dbVar:nssv15161849;dbVar:nssv15775349;dbVar:nssv15161867;dbVar:nssv15775091;dbVar:nssv15161075;dbVar:nssv15161551	8:10214-146293414;8:13939-146304022;8:158049-146295771;8:158050-146295771;8:158992-146280828;8:164985-146293414;8:176453-146294098;8:191531-146274835;8:191531-146280020;8:191606-146280167;8:12491000-146295771;8:21149034-146295771;8:31936552-146295771;8:68912433-146295771;8:70382991-146295771;8:78392287-146294098;8:79526313-146280020;8:84712254-146295771;8:86778229-146295771;8:86841155-146295771;8:86841229-142689874;8:88943381-146294098;8:93047483-141355635;8:95694383-146294042;8:96496504-146295711;8:98395102-146295771;8:98432251-146222672;8:101879572-146295771;8:104318565-146294098;8:114592632-146280020;8:114853127-146295771;8:121042468-146295771;8:121694650-146295771;8:122193547-146295771;8:125496224-146295771;8:125510740-146294098;8:125526332-146280020;8:128877996-146295771;8:129233159-146274835;8:130863094-146295771;8:131127765-142238309;8:131138344-143473913;8:131651429-146294098;8:131682564-146280020;8:134825278-146280828;8:136059860-146295771;8:136378790-146295771;8:139188798-146295771;8:140016462-146274835;8:140249068-146294098	0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.03;0.03;0.04;0.04;0.04;0.04;0.04;0.05;0.05;0.05;0.05;0.05;0.06;0.06;0.06;0.06;0.08;0.08;0.10;0.11;0.11;0.13;0.13;0.13;0.15;0.16;0.17;0.24;0.21;0.18;0.18;0.23;0.26;0.27;0.37;0.42;0.44	Intellectual developmental disorder, AR 13, 613192 (3) AR		dbVar:nssv16208202;dbVar:nssv15127815;morbid:TRAPPC9	8:126892815-143750028;8:127638607-144388560;8:140739968-141468678	0.16;0.16;3.63						dbVar	chr8:140980774-141135131	0.01													chr8:141040435-141042904 dbVar	chr8:140980774-141135131 dbVar	0.535	0.380	8:141035378-141035461;8:141035462-141035486	MER58C;(CAAAA)n														53.39	0.107633755409335	-1.97676981971355	-1.34878674017516	-0.190632175596259	1.58912949219012							611966			yes		3	2.2898e-14	5.7604e-06	-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)	1
8_141035364_141061798_DEL_1	8	141035364	141061798	-26435	DEL	DI AR	Pathogenic	NA	split	q24.3	TRAPPC9				NM_001160372	4	140739967	141467843	26435	0	0	NA	23	intron17-intron17	CDS	1187	3'	141035363	141061798																													dbVar	chr8:140980774-141135131	0.01																														30	0	53.39	0.107633755409335	-1.97676981971355	-1.34878674017516	-0.190632175596259	1.58912949219012	autosomal recessive non-syndromic intellectual disability;intellectual disability, autosomal recessive 13;intellectual disability-obesity-brain malformations-facial dysmorphism syndrome	AR	Definitive;Moderate;Strong;Supportive	2000476;20004763;20004764;20004765;20004765[PMID]_20004763[PMID]_20004765[PMID];22549410;22549410[PMID]	83696	HGNC:30832	611966	Intellectual developmental disorder, AR 13, 613192 (3) AR	AR	yes		3	2.2898e-14	5.7604e-06			full=1
14_107152093_107180095_DEL_1	14	107152093	107180095	-28003	DEL		Benign	NA	full	q32.33		LINC00221	MIR5195	0																															dbVar:nssv15162475;dbVar:nssv15161908;dbVar:nssv15162476;dbVar:nssv15161629;dbVar:nssv15161107;nssv15161424;dbVar:nssv15161067;dbVar:nssv15161689;dbVar:nssv15161760;dbVar:nssv15161081;dbVar:nssv18330720;dbVar:nssv15161039;dbVar:nssv15161040;dbVar:nssv15777241;dbVar:nssv15125898;dbVar:nssv15161535;dbVar:nssv15777234;dbVar:nssv15161537;dbVar:nssv15606082;dbVar:nssv15161360;dbVar:nssv15135151	14:19000423-107289053;14:19280734-107287663;14:19327824-107287663;14:19794562-107234280;14:20511674-107285437;14:20619309-107263478;14:73750742-107285437;14:74122476-107287505;14:77689139-107287505;14:84537503-107285437;14:86560375-107240869;14:91922206-107240869;14:91969029-107285437;14:93331785-107289540;14:98104858-107263478;14:99794231-107285437;14:99914350-107258824;14:100575918-107281934;14:103788752-107263478;14:106252706-107263478	0.03;0.03;0.03;0.03;0.03;0.03;0.08;0.08;0.09;0.12;0.14;0.18;0.18;0.20;0.31;0.37;0.38;0.42;0.81;2.77			dbVar:nssv15161324;dbVar:nssv16215328;dbVar:nssv15161030;dbVar:nssv15161062;dbVar:nssv15142554;dbVar:nssv15161267;dbVar:nssv15161579;dbVar:nssv15161268;dbVar:nssv17968992;dbVar:nssv15161102;dbVar:nssv15161557;dbVar:nssv16255573;dbVar:nssv15142555;dbVar:nssv15161354;dbVar:nssv18841864;dbVar:nssv15777252;dbVar:nssv15161369;dbVar:nssv15141232;nssv16208943;dbVar:nssv18830964;dbVar:nssv15150359;dbVar:nssv15161271;dbVar:nssv15161574;dbVar:nssv15161803;dbVar:nssv16208399;dbVar:nssv15142293;dbVar:nssv16208400;dbVar:nssv15120383;dbVar:nssv15137946	14:95990745-107287708;14:96829291-107287663;14:98404975-107263478;14:100297993-107263478;14:100661320-107285437;14:100775720-107263478;14:101048397-107285437;14:101274638-107263478;14:101732159-107285437;14:102131940-107263478;14:102392008-107284531;14:102615954-107285437;14:102670707-107285437;14:102705760-107285437;14:102729778-107283138;14:102931120-107285437;14:103071434-107287505;14:103153638-107285437;14:103636648-107285437;14:103965060-107285437;14:104251096-107278770;14:104289938-107287505;14:104517596-107285437;14:104764079-107285437;14:104915609-107285437;14:105303585-107285437;14:105489734-107258965;14:106252706-107287505	0.25;0.27;0.32;0.40;0.42;0.43;0.45;0.47;0.50;0.55;0.57;0.60;0.61;0.61;0.61;0.64;0.66;0.68;0.77;0.84;0.92;0.93;1.01;1.11;1.18;1.41;1.58;2.71			DDD:43963;TS40:ISCA-37477;esv2760346	14:106050001-107289540;14:106437088-107285437;14:107136632-107191499	0.0828	DDD:43904;DDD:43963;HI40:ISCA-37477;esv2760346	14:106050001-107289540;14:106437088-107285437;14:106700994-107266403;14:107136632-107191499	0.2438									14:106437088-107285437 esv2760346;14:107136632-107191499 DDD:43963;14:107147167-107164532 TS40:ISCA-46684;	14:106050001-107289540 TS40:ISCA-37477;14:106874357-107164992 IMH;14:107145552-107179808 dgv699e212;14:107147167-107164532 dgv428e214			14:106437088-107285437 esv2760346;14:107054315-107166266 DDD:43951;chr14:107138985-107155491 dbVar;14:107172849-107183396 HI40:ISCA-46673;14:107174372-107174933 IMH;14:107174399-107174927 DDD:43974;	14:106050001-107289540 HI40:ISCA-37477;14:106700994-107266403 DDD:43904;14:107136632-107191499 DDD:43963;chr14:107171543-107171645 dbVar;14:107172849-107183396 esv3635707;14:107174391-107174931 esv3635708;14:107174399-107174927 esv2665347	0.355	0.425									14:107151001-107176900	High Signal Region																										-1.6	1B (cf Gene_count, RE_gene, -0.60);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (0 gene, +0.00);5F (+0.00)	1
6_78979173_79023328_DEL_1	6	78979173	79023328	-44156	DEL		Benign	NA	full	q14.1		MEI4	MIR10524	0																															dbVar:nssv15166690;dbVar:nssv15166692;dbVar:nssv15161859;nssv15161868;dbVar:nssv15168255;dbVar:nssv15606075;dbVar:nssv17970109;dbVar:nssv15148895	6:60108-171054786;6:108667-170980171;6:156976-170919482;6:165633-170919470;6:29455466-81447367;6:69938253-94379210;6:75092524-142361637	0.03;0.03;0.03;0.03;0.08;0.18;0.07			dbVar:nssv17976865;dbVar:nssv15138420;dbVar:nssv17957115;dbVar:nssv17956905;dbVar:nssv15154430;dbVar:nssv16255333;dbVar:nssv15139907;dbVar:nssv16215036	6:64954688-79581678;6:65259549-84136510;6:70165297-79920769;6:72799055-83275894;6:73674613-84829774;6:74226560-80208037;6:76635917-93420511;6:78562076-79746800	0.30;0.23;0.45;0.42;0.40;0.74;0.26;3.73			DDD:21366;dgv768n27;nsv516597	6:78848098-79052702;6:78950789-79066065;6:78973202-79031742	0.3704	1000g;DDD:21366;DDD:21369;DDD:21373;IMH;dbVar;dgv10802n54;dgv1137e199;dgv1810e212;dgv1811e212;dgv6030n100;dgv6037n100;dgv766n27;dgv767n27;dgv769n27;esv2422170;esv2760997;esv2763987;esv3609657;esv3609663;esv3890888;gnomAD-SV_v2.1_DEL_6_70839;nsv514376;nsv516597	6:78836835-79051952;6:78848098-79052702;chr6:78892808-79053430;6:78892809-79053430;6:78892809-79053430;6:78950789-79066065;6:78961945-79041809;6:78962294-79041760;6:78962541-79031742;6:78962541-79052702;6:78962582-79027502;6:78962582-79041797;chr6:78962843-79034588;6:78965526-79033478;chr6:78967097-79036275;6:78967098-79036275;6:78967098-79036275;6:78967173-79036477;chr6:78967187-79036419;6:78967187-79036419;6:78967195-79036475;6:78967195-79036497;6:78969054-79027758;6:78969066-79031970;6:78969066-79035185;6:78972098-79031153;6:78972931-79033478;6:78973202-79031742	0.4631				IMH	6:49889718-107723757	0.1414			6:78950789-79066065 DDD:21366;6:78973202-79031742 dgv768n27;	6:78848098-79052702 nsv516597;6:78963972-78992918 DDD:21367;6:78999918-79033124 DDD:21375			6:78848098-79052702 nsv516597;6:78892809-79053430 1000g;6:78950789-79066065 DDD:21366;6:78962294-79041760 dgv1810e212;6:78962541-79052702 dgv767n27;6:78962582-79041797 dgv6030n100;6:78965526-79033478 esv3890888;6:78967098-79036275 1000g;6:78967173-79036477 IMH;6:78967187-79036419 gnomAD-SV_v2.1_DEL_6_70839;6:78967195-79036497 dgv1137e199;6:78969066-79031970 DDD:21373;6:78972098-79031153 nsv514376;6:78973202-79031742 dgv769n27	6:78836835-79051952 esv2760997;chr6:78892808-79053430 dbVar;6:78892809-79053430 esv3609657;6:78961945-79041809 esv2763987;6:78962541-79031742 dgv766n27;6:78962582-79027502 dgv1811e212;chr6:78962843-79034588 dbVar;chr6:78967097-79036275 dbVar;6:78967098-79036275 esv3609663;chr6:78967187-79036419 dbVar;6:78967195-79036475 DDD:21369;6:78969054-79027758 dgv6037n100;6:78969066-79035185 esv2422170;6:78972931-79033478 dgv10802n54	0.325	0.270																																				-1.6	1B (cf Gene_count, RE_gene, -0.60);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (0 gene, +0.00);5F (+0.00)	1


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FILE: share/doc/AnnotSV/Example/test1.annotated.variantconvert.log
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python3 /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert//src/variantconvert convert -i /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test1.annotated.tsv -o /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test1.annotated.vcf -c /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert//src/variantconvert/configs/GRCh37/annotsv3_from_bed.combined.local.json

2026-04-14 12:03:34 [INFO] running variantconvert 2.0.1
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[1.0 '.' 2.0 '.' '.' 1.0 '.' 9.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' 2.0
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' 1.0 '.' 12.0 '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' 2.0 '.' '.' 0.0 1.0 '.'
 1.0 '.' 30.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 32.0 '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 32.0 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' 6.0 '.' '.' '.' '.' '.' '.' 1.0 '.'
 9.0 '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 1.0 '.' 6.0 3.0 '.' 2.0 '.' 1.0 2.0 2.0 2.0 3.0 1.0 1.0 1.0 1.0 '.'
 5.0 2.0 '.' 5.0 '.' 5.0 '.' 1.0 '.' 1.0 2.0 '.' '.' 1.0 1.0 2.0 2.0 1.0
 2.0 1.0 1.0 1.0 1.0 2.0 1.0 2.0 2.0 1.0 1.0 2.0 4.0 1.0 1.0 1.0 1.0 1.0
 1.0 1.0 3.0 '.' 1.0 2.0 2.0 1.0 2.0 1.0 1.0 1.0 1.0 2.0 1.0 2.0 2.0 1.0
 1.0 2.0 4.0 '.' '.' 4.0 '.' 1.0 1.0 3.0 1.0 1.0 5.0 3.0 3.0 1.0 4.0 1.0
 1.0 1.0 1.0 1.0 1.0 1.0 2.0 '.' 1.0 5.0 3.0 3.0 1.0 4.0 1.0 '.' 1.0 1.0
 1.0 '.' 2.0 '.' 4.0 3.0 3.0 1.0 1.0 1.0 1.0 4.0 1.0 3.0 2.0 2.0 1.0 3.0
 '.' 7.0 4.0 2.0 2.0 6.0 4.0 5.0 '.' 1.0 1.0 '.' 1.0 1.0 1.0 1.0 '.' 6.0
 6.0 1.0 2.0 1.0 3.0 1.0 3.0 5.0 2.0 1.0 2.0 4.0 4.0 4.0 5.0 1.0 7.0 2.0
 1.0 1.0 6.0 1.0 5.0 1.0 3.0 6.0 5.0 4.0 1.0 3.0 2.0 1.0 7.0 1.0 1.0 2.0
 1.0 2.0 1.0 2.0 2.0 2.0 1.0 6.0 1.0 4.0 1.0 1.0 1.0 1.0 1.0 2.0 1.0 2.0
 1.0 2.0 7.0 4.0 3.0 1.0 1.0 4.0 4.0 4.0 4.0 1.0 3.0 4.0 3.0 1.0 1.0 1.0
 3.0 1.0 1.0 2.0 1.0 '.' 1.0 2.0 1.0 2.0 1.0 2.0 4.0 1.0 1.0 2.0 1.0 2.0
 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 1.0 1.0 1.0 '.' 5.0 '.' 1.0 1.0 2.0 '.'
 2.0 6.0 1.0 3.0 4.0 1.0 2.0 4.0 3.0 2.0 1.0 4.0 1.0 4.0 1.0 2.0 3.0 1.0
 4.0 4.0 4.0 4.0 4.0 5.0 3.0 4.0 1.0 1.0 2.0 1.0 1.0 1.0 1.0 3.0 2.0 1.0
 3.0 4.0 2.0 3.0 2.0 3.0 3.0 1.0 5.0 1.0 3.0 4.0 4.0 2.0 3.0 1.0 3.0 4.0
 5.0 2.0 4.0 2.0 2.0 1.0 2.0 2.0 3.0 2.0 8.0 2.0 1.0 2.0 2.0 4.0 1.0 1.0
 4.0 1.0 3.0 2.0 3.0 2.0 1.0 4.0 1.0 1.0 1.0 1.0 1.0 3.0 1.0 3.0 3.0 1.0
 5.0 3.0 3.0 1.0 3.0 2.0 1.0 1.0 1.0 4.0 3.0 2.0 1.0 3.0 1.0 3.0 3.0 3.0
 2.0 2.0 1.0 3.0 3.0 4.0 1.0 3.0 1.0 2.0 1.0 1.0 2.0 1.0 2.0 1.0 5.0 5.0
 1.0 3.0 3.0 5.0 3.0 1.0 3.0 3.0 1.0 1.0 1.0 1.0 2.0 1.0 1.0 1.0 1.0 1.0
 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 '.' 4.0 '.' 2.0 '.' 1.0 1.0
 1.0 2.0 1.0 2.0 1.0 2.0 4.0 1.0 4.0 1.0 '.' 3.0 '.' 4.0 3.0 '.' '.' 1.0
 '.' 2.0 '.' 3.0 5.0 3.0 1.0 2.0 4.0 3.0 2.0 3.0 3.0 4.0 1.0 1.0 4.0 4.0
 5.0 3.0 4.0 2.0 1.0 4.0 2.0 1.0 4.0 3.0 5.0 2.0 1.0 4.0 1.0 '.' 2.0 2.0
 1.0 1.0 3.0 2.0 4.0 4.0 1.0 2.0 3.0 2.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
 1.0 1.0 1.0 1.0 1.0 1.0 3.0 4.0 3.0 1.0 4.0 4.0 '.' 2.0 2.0 1.0 1.0 3.0
 2.0 4.0 4.0 1.0 2.0 3.0 2.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
 1.0 1.0 1.0 3.0 4.0 3.0 1.0 4.0 4.0 '.' 3.0 1.0 1.0 1.0 2.0 3.0 '.' 4.0
 '.' 2.0 3.0 4.0 1.0 5.0 3.0 7.0 1.0 1.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 149194105.0 '.' 196743969.0 196788860.0 '.' 248753787.0 '.'
 46992020.0 47083456.0 47096453.0 47133334.0 47157988.0 47177206.0
 47192907.0 47379719.0 47590260.0 '.' 66278105.0 66288095.0 '.' 63952692.0
 '.' 63952692.0 '.' 22847807.0 '.' 73945188.0 74003846.0 '.' '.'
 20487996.0 20613648.0 20737093.0 20767673.0 20874796.0 21038123.0
 21040700.0 21145580.0 21145766.0 21208605.0 21932513.0 22014402.0
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 22413461.0 22448239.0 22465805.0 22513228.0 22546564.0 22675147.0
 22702284.0 22736245.0 '.' 20613648.0 20737093.0 20767673.0 20874796.0
 21038123.0 21040700.0 21145580.0 21145766.0 21208605.0 21932513.0
 22014402.0 22051852.0 22133180.0 22195582.0 22278030.0 22368477.0
 22382472.0 '.' '.' 1560427.0 '.' 32163432.0 32181363.0 32264606.0
 32300867.0 32611681.0 32684850.0 32888793.0 33205546.0 33215160.0
 33262081.0 33298270.0 33571843.0 33966044.0 34264719.0 34403801.0
 34430129.0 34442319.0 34597786.0 '.' 32611681.0 32684850.0 32888793.0
 33205546.0 33215160.0 33262081.0 33298270.0 '.' 33571843.0 33966044.0
 34264719.0 '.' 34597786.0 '.' 13972820.0 14138989.0 14204397.0 14207056.0
 14934291.0 14954671.0 15008301.0 15133095.0 15154943.0 15207128.0
 15339331.0 15339331.0 15373624.0 15405577.0 '.' 34493062.0 34522267.0
 34538464.0 34581084.0 34623841.0 34746118.0 34797171.0 '.' 44107281.0
 44270938.0 '.' 242823513.0 242912833.0 242943359.0 242989834.0 '.'
 18893832.0 18900293.0 18926981.0 18957980.0 19017036.0 19023798.0
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 19166985.0 19318220.0 19420067.0 19428408.0 19434956.0 19437433.0
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 19748300.0 19770745.0 19833668.0 19863044.0 19929294.0 19951275.0
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 20099397.0 20102208.0 20103626.0 20113924.0 20119326.0 20135938.0
 20186251.0 20193854.0 20228937.0 20236656.0 20301760.0 20326419.0
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 21043842.0 21055401.0 21061978.0 21128400.0 21213294.0 21271694.0
 21311379.0 21319459.0 21336585.0 21353392.0 21356210.0 21362491.0
 21369453.0 21383006.0 21388464.0 21396680.0 21400234.0 21457304.0 '.'
 63088363.0 63263983.0 63409271.0 63638350.0 63727499.0 63804974.0
 63819545.0 63846320.0 63884074.0 63897187.0 63989697.0 63996226.0
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 64430932.0 64501329.0 64547021.0 64670545.0 65160613.0 '.' 97483364.0 '.'
 195415368.0 195426271.0 195447848.0 '.' 53214.0 124382.0 206388.0
 264463.0 331602.0 343945.0 419223.0 433776.0 492998.0 567668.0 570956.0
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 8747121.0 8868773.0 9172134.0 9212382.0 9217130.0 9221877.0 9226621.0
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 9326890.0 9331636.0 9336383.0 9341128.0 9345873.0 9350618.0 9355363.0
 9360107.0 9364854.0 9369599.0 '.' 69402890.0 '.' 710469.0 '.' 89198108.0
 89312437.0 89454155.0 89688073.0 89705816.0 89754025.0 89769745.0
 89811442.0 89854613.0 90598802.0 90664447.0 90676163.0 '.' 292486.0 '.'
 29855349.0 29892368.0 '.' '.' 33168896.0 '.' 38299243.0 '.' 72726531.0
 72742163.0 72848107.0 72854735.0 72950685.0 72981866.0 73007531.0
 73082160.0 73095247.0 73097926.0 73113539.0 73125646.0 73149398.0
 73150423.0 73183326.0 73245325.0 73248919.0 73275488.0 73442502.0
 73473234.0 73498133.0 73588685.0 73605527.0 73624335.0 73645831.0
 73703736.0 73868235.0 74010294.0 74072043.0 74103270.0 '.' 7156265.0
 7170243.0 7189908.0 7194636.0 7213038.0 7272376.0 7286409.0 7308124.0
 7327829.0 7340025.0 7345200.0 7353432.0 7397148.0 7414221.0 7429516.0
 7437165.0 7572964.0 7580612.0 7588260.0 7595908.0 7603555.0 7611203.0
 7618851.0 7626498.0 7636112.0 7669241.0 7678525.0 7682660.0 7693957.0
 7705529.0 7738913.0 7752198.0 '.' 7156265.0 7170243.0 7189908.0 7194636.0
 7213038.0 7272376.0 7286409.0 7308124.0 7327829.0 7340025.0 7345200.0
 7353432.0 7397148.0 7414221.0 7429516.0 7437165.0 7572964.0 7580612.0
 7588260.0 7595908.0 7603555.0 7611203.0 7618851.0 7626498.0 7636112.0
 7669241.0 7678525.0 7682660.0 7693957.0 7705529.0 7738913.0 7752198.0 '.'
 56979812.0 56986397.0 56987150.0 57025500.0 57073467.0 57124347.0 '.'
 140739967.0 '.' 53205458.0 53262057.0 53401069.0 53432604.0 53449821.0
 53458208.0 53559056.0 53583183.0 53584152.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 149194269.0 '.' 196764537.0 196801319.0 '.' 248761001.0 '.'
 47007881.0 47088320.0 47151400.0 47133898.0 47173994.0 47181688.0
 47213477.0 47421238.0 47640844.0 '.' 66301069.0 66313519.0 '.' 64062273.0
 '.' 64062273.0 '.' 22951948.0 '.' 74025651.0 74010500.0 '.' '.'
 20496811.0 20711433.0 20747114.0 20781026.0 20961480.0 21038198.0
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 34431919.0 34479081.0 34626084.0 '.' 32626892.0 32687486.0 32896463.0
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 7621862.0 7629510.0 7638935.0 7673238.0 7681402.0 7686575.0 7698764.0
 7718465.0 7740185.0 7754238.0 '.' 7212885.0 7177618.0 7191501.0 7196229.0
 7243080.0 7274385.0 7287870.0 7321064.0 7332604.0 7343922.0 7347115.0
 7366833.0 7399972.0 7417234.0 7432528.0 7440175.0 7575975.0 7583623.0
 7591271.0 7598918.0 7606566.0 7614214.0 7621862.0 7629510.0 7638935.0
 7673238.0 7681402.0 7686575.0 7698764.0 7718465.0 7740185.0 7754238.0 '.'
 56987065.0 56986460.0 56987833.0 57026541.0 57123832.0 57131368.0 '.'
 141467843.0 '.' 53254389.0 53350548.0 53449603.0 53432697.0 53458063.0
 53461317.0 53713664.0 53583302.0 53584235.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 164.0 '.' 8306.0 10442.0 '.' 7214.0 '.' 15861.0 4864.0 54947.0 564.0
 16006.0 4482.0 20570.0 41519.0 735.0 '.' 1759.0 752.0 '.' 109581.0 '.'
 109581.0 '.' 104141.0 '.' 20673.0 6654.0 '.' '.' 8815.0 97785.0 10021.0
 13353.0 86684.0 75.0 30943.0 82.0 52867.0 46560.0 8226.0 2476.0 31407.0
 12622.0 4396.0 105534.0 1084.0 1341.0 937.0 642.0 742.0 52.0 24267.0 94.0
 13444.0 9757.0 '.' 97785.0 10021.0 13353.0 86684.0 75.0 30943.0 82.0
 52867.0 46560.0 8226.0 2476.0 31407.0 12622.0 4396.0 105534.0 1084.0
 1341.0 '.' '.' 5668.0 '.' 36002.0 18071.0 2643.0 435.0 15211.0 2636.0
 7670.0 2633.0 17249.0 2638.0 21026.0 14899.0 96.0 29980.0 961.0 1790.0
 36762.0 28298.0 '.' 15211.0 2636.0 7670.0 2633.0 17249.0 2638.0 21026.0
 '.' 14899.0 96.0 21129.0 '.' 28298.0 '.' 11876.0 1190.0 48324.0 2006.0
 983.0 922.0 1203.0 35548.0 70.0 37786.0 31604.0 102735.0 526.0 36489.0
 '.' 10934.0 1890.0 1811.0 10955.0 1890.0 10887.0 10887.0 '.' 125255.0
 3151.0 '.' 154953.0 6594.0 4805.0 36455.0 '.' 4766.0 23513.0 8225.0
 60775.0 698.0 86127.0 2214.0 14373.0 1315.0 3300.0 1127.0 2925.0 112257.0
 101036.0 3531.0 6826.0 4255.0 29283.0 40787.0 2314.0 710.0 8817.0 7555.0
 1233.0 6557.0 71652.0 8729.0 66297.0 28204.0 82.0 46928.0 46055.0 82.0
 31632.0 88.0 85.0 5352.0 66.0 11252.0 125.0 16204.0 2640.0 6190.0 2206.0
 26904.0 78.0 5823.0 24042.0 11201.0 1818.0 2772.0 14965.0 6105.0 699.0
 24739.0 17592.0 14305.0 13239.0 54277.0 80010.0 2167.0 3490.0 151121.0
 13608.0 32208.0 36341.0 7589.0 16188.0 16736.0 3015.0 8453.0 6085.0
 12844.0 3844.0 97.0 1858.0 18223.0 6815.0 '.' 22375.0 338617.0 126456.0
 12538.0 71814.0 29338.0 29936.0 1175.0 105064.0 872.0 8222.0 12944.0
 4299.0 35168.0 9003.0 175938.0 2889.0 14018.0 10814.0 172347.0 28739.0
 326598.0 18565.0 '.' 3710.0 '.' 19578.0 97.0 12574.0 '.' 16544.0 33570.0
 43386.0 34800.0 47055.0 96.0 48775.0 59169.0 40991.0 2416.0 7699.0
 45210.0 2296.0 1841.0 7487.0 7323.0 64257.0 21407.0 41173.0 83040.0
 26197.0 14683.0 5748.0 17521.0 15273.0 42087.0 19337.0 7968.0 41913.0
 13180.0 8472.0 37686.0 3568.0 50247.0 40842.0 3511.0 44427.0 19589.0
 5372.0 23651.0 15575.0 44678.0 110800.0 125.0 26252.0 94.0 1970.0 9763.0
 170204.0 13773.0 14678.0 80.0 149049.0 44048.0 46752.0 195927.0 14689.0
 22927.0 86219.0 4259.0 15533.0 25471.0 77190.0 28486.0 169280.0 7455.0
 154023.0 7519.0 38177.0 28811.0 14117.0 4263.0 2142.0 13669.0 38204.0
 12682.0 22454.0 31533.0 31957.0 123081.0 5580.0 168808.0 98.0 25615.0
 6391.0 4272.0 67864.0 4873.0 449510.0 3233.0 146121.0 103105.0 72323.0
 54.0 59057.0 174351.0 5186.0 33204.0 33416.0 152034.0 48174.0 2045.0
 3154.0 1973.0 3072.0 3293.0 2165.0 1491.0 101438.0 123649.0 15678.0
 2153.0 14581.0 9170.0 5953.0 550290.0 75.0 4646.0 91.0 24839.0 181148.0
 1296.0 193487.0 81.0 41814.0 37345.0 3790.0 74442.0 35779.0 9632.0
 26988.0 2327.0 4792.0 6322.0 1593.0 1593.0 1593.0 1593.0 1662.0 1593.0
 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0
 1593.0 1593.0 1593.0 1593.0 1197.0 '.' 39150.0 '.' 53806.0 '.' 71709.0
 100.0 131733.0 17500.0 670.0 16563.0 40629.0 13959.0 605641.0 11417.0
 14687.0 40369.0 '.' 58869.0 '.' 3507.0 2624.0 '.' '.' 140.0 '.' 13994.0
 '.' 15507.0 30471.0 2343.0 81888.0 21335.0 11043.0 31321.0 4280.0 2536.0
 14616.0 20460.0 81.0 932.0 2709.0 1274.0 1695.0 7927.0 4732.0 41735.0
 3376.0 38722.0 22741.0 97.0 19829.0 22898.0 116529.0 148696.0 59.0
 67347.0 36120.0 '.' 43395.0 7375.0 1593.0 1593.0 30042.0 2009.0 1461.0
 12940.0 4775.0 3897.0 1915.0 13401.0 2824.0 3013.0 3012.0 3010.0 3011.0
 3011.0 3011.0 3010.0 3011.0 3011.0 3011.0 3012.0 2823.0 3997.0 2877.0
 3915.0 4807.0 12936.0 1272.0 1385.0 '.' 43395.0 7375.0 1593.0 1593.0
 30042.0 2009.0 1461.0 12940.0 4775.0 3897.0 1915.0 13401.0 2824.0 3013.0
 3012.0 3010.0 3011.0 3011.0 3011.0 3010.0 3011.0 3011.0 3011.0 3012.0
 2823.0 3997.0 2877.0 3915.0 4807.0 12936.0 1272.0 1385.0 '.' 936.0 63.0
 683.0 1041.0 50365.0 7021.0 '.' 26435.0 '.' 3736.0 88491.0 48534.0 93.0
 8242.0 3109.0 154608.0 119.0 83.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 0.0 '.' 563.0 607.0 '.' 939.0 '.' 1449.0 1128.0 0.0 0.0 984.0 0.0 0.0
 0.0 0.0 '.' 238.0 0.0 '.' 2277.0 '.' 2277.0 '.' 0.0 '.' 0.0 1266.0 '.'
 '.' 0.0 0.0 2175.0 0.0 0.0 0.0 1635.0 0.0 0.0 0.0 0.0 0.0 1635.0 0.0 0.0
 0.0 942.0 951.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2007.0 '.' 0.0 2175.0 0.0 0.0
 0.0 1635.0 0.0 0.0 0.0 0.0 0.0 1635.0 0.0 0.0 0.0 942.0 951.0 '.' '.'
 729.0 '.' 0.0 0.0 375.0 0.0 0.0 375.0 0.0 375.0 0.0 375.0 0.0 0.0 0.0 0.0
 0.0 0.0 0.0 0.0 '.' 0.0 375.0 0.0 375.0 0.0 375.0 0.0 '.' 0.0 0.0 0.0 '.'
 0.0 '.' 404.0 567.0 1173.0 0.0 0.0 0.0 0.0 483.0 0.0 1473.0 459.0 33.0
 0.0 369.0 '.' 1650.0 282.0 312.0 1650.0 282.0 1650.0 1650.0 '.' 1431.0
 0.0 '.' 0.0 0.0 0.0 0.0 '.' 392.0 1803.0 0.0 0.0 696.0 1653.0 0.0 1431.0
 1077.0 618.0 0.0 957.0 4923.0 3054.0 621.0 318.0 0.0 924.0 1797.0 912.0
 0.0 1110.0 0.0 621.0 1515.0 984.0 1095.0 1575.0 816.0 0.0 2889.0 1110.0
 0.0 2322.0 0.0 0.0 1932.0 0.0 837.0 0.0 2337.0 1209.0 0.0 0.0 1422.0 0.0
 663.0 0.0 0.0 678.0 1041.0 0.0 4920.0 699.0 0.0 0.0 1935.0 2607.0 1905.0
 2367.0 0.0 0.0 6309.0 1500.0 777.0 912.0 0.0 1818.0 2523.0 930.0 0.0 0.0
 1422.0 1908.0 0.0 0.0 1179.0 0.0 '.' 0.0 858.0 0.0 534.0 0.0 879.0 615.0
 0.0 2838.0 0.0 0.0 1329.0 0.0 0.0 0.0 2535.0 0.0 0.0 0.0 5808.0 0.0 0.0
 0.0 '.' 123.0 '.' 0.0 0.0 2130.0 '.' 1709.0 1239.0 0.0 1758.0 1425.0 0.0
 0.0 2772.0 2952.0 1158.0 0.0 2565.0 0.0 210.0 522.0 1683.0 729.0 0.0
 405.0 3936.0 1515.0 2829.0 2106.0 1962.0 1515.0 894.0 0.0 0.0 996.0 0.0
 0.0 1326.0 0.0 1191.0 2130.0 1347.0 1197.0 813.0 1089.0 2517.0 2427.0
 2220.0 4098.0 0.0 1587.0 0.0 288.0 909.0 2703.0 1812.0 630.0 0.0 2664.0
 1941.0 573.0 4548.0 1290.0 1857.0 2400.0 1443.0 0.0 2574.0 1737.0 0.0
 9429.0 837.0 4344.0 1989.0 1827.0 1074.0 0.0 0.0 1389.0 0.0 1839.0 498.0
 1140.0 2298.0 585.0 1008.0 0.0 0.0 0.0 0.0 0.0 912.0 0.0 411.0 1245.0 0.0
 3927.0 2979.0 2061.0 0.0 4527.0 2496.0 138.0 0.0 2673.0 1344.0 3030.0
 384.0 0.0 360.0 0.0 288.0 384.0 654.0 4188.0 2082.0 0.0 1668.0 1263.0
 654.0 0.0 3480.0 0.0 1566.0 0.0 0.0 2445.0 0.0 1938.0 0.0 4011.0 1362.0
 0.0 2103.0 2274.0 1092.0 1959.0 0.0 1047.0 1395.0 1593.0 1593.0 1593.0
 1593.0 1662.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0
 1593.0 1593.0 1593.0 1593.0 1593.0 0.0 1593.0 0.0 '.' 1593.0 '.' 1058.0
 '.' 0.0 0.0 0.0 576.0 0.0 840.0 672.0 921.0 18921.0 0.0 1245.0 0.0 '.'
 618.0 '.' 0.0 0.0 '.' '.' 140.0 '.' 336.0 '.' 1464.0 984.0 1776.0 4452.0
 642.0 1344.0 2559.0 756.0 681.0 897.0 867.0 0.0 0.0 921.0 663.0 630.0
 738.0 798.0 2361.0 0.0 1944.0 747.0 0.0 732.0 1065.0 3141.0 2931.0 0.0
 943.0 0.0 '.' 0.0 264.0 1593.0 1593.0 903.0 195.0 204.0 402.0 219.0 198.0
 237.0 213.0 840.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0
 1395.0 1395.0 1395.0 840.0 213.0 237.0 198.0 219.0 402.0 204.0 58.0 '.'
 0.0 264.0 1593.0 1593.0 903.0 195.0 204.0 402.0 219.0 198.0 237.0 213.0
 840.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0
 1395.0 1395.0 840.0 213.0 237.0 198.0 219.0 402.0 204.0 58.0 '.' 177.0
 0.0 0.0 1041.0 1503.0 333.0 '.' 0.0 '.' 150.0 4467.0 3702.0 0.0 1140.0
 786.0 13125.0 0.0 0.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 0.0 '.' 56.0 61.0 '.' 97.0 '.' 100.0 73.0 0.0 0.0 100.0 0.0 0.0 0.0
 0.0 '.' 13.0 0.0 '.' 100.0 '.' 100.0 '.' 0.0 '.' 0.0 100.0 '.' '.' 0.0
 0.0 100.0 0.0 0.0 0.0 100.0 0.0 0.0 0.0 0.0 0.0 100.0 0.0 0.0 0.0 95.0
 100.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 100.0 '.' 0.0 100.0 0.0 0.0 0.0 100.0
 0.0 0.0 0.0 0.0 0.0 100.0 0.0 0.0 0.0 95.0 100.0 '.' '.' 16.0 '.' 0.0 0.0
 100.0 0.0 0.0 100.0 0.0 100.0 0.0 100.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
 '.' 0.0 100.0 0.0 100.0 0.0 100.0 0.0 '.' 0.0 0.0 0.0 '.' 0.0 '.' 30.0
 100.0 100.0 0.0 0.0 0.0 0.0 100.0 0.0 100.0 100.0 6.0 0.0 44.0 '.' 100.0
 100.0 100.0 100.0 100.0 100.0 100.0 '.' 43.0 0.0 '.' 0.0 0.0 0.0 0.0 '.'
 59.0 100.0 0.0 0.0 100.0 100.0 0.0 100.0 88.0 100.0 0.0 100.0 100.0 100.0
 100.0 100.0 0.0 100.0 100.0 52.0 0.0 100.0 0.0 100.0 100.0 100.0 82.0
 100.0 100.0 0.0 100.0 100.0 0.0 100.0 0.0 0.0 100.0 0.0 100.0 0.0 100.0
 100.0 0.0 0.0 100.0 0.0 100.0 0.0 0.0 100.0 100.0 0.0 91.0 100.0 0.0 0.0
 100.0 100.0 100.0 100.0 0.0 0.0 100.0 100.0 100.0 100.0 0.0 100.0 100.0
 100.0 0.0 0.0 100.0 100.0 0.0 0.0 100.0 0.0 '.' 0.0 100.0 0.0 100.0 0.0
 100.0 100.0 0.0 100.0 0.0 0.0 100.0 0.0 0.0 0.0 100.0 0.0 0.0 0.0 100.0
 0.0 0.0 0.0 '.' 21.0 '.' 0.0 0.0 100.0 '.' 92.0 100.0 0.0 100.0 100.0 0.0
 0.0 100.0 100.0 83.0 0.0 100.0 0.0 100.0 100.0 100.0 100.0 0.0 100.0
 100.0 100.0 100.0 100.0 100.0 100.0 100.0 0.0 0.0 100.0 0.0 0.0 100.0 0.0
 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 0.0 100.0 0.0
 100.0 100.0 100.0 100.0 100.0 0.0 100.0 100.0 100.0 100.0 100.0 100.0
 100.0 100.0 0.0 100.0 100.0 0.0 100.0 100.0 100.0 100.0 100.0 100.0 0.0
 0.0 72.0 0.0 100.0 100.0 100.0 100.0 100.0 100.0 0.0 0.0 0.0 0.0 0.0
 100.0 0.0 100.0 100.0 0.0 100.0 100.0 100.0 0.0 100.0 100.0 100.0 0.0
 100.0 100.0 100.0 96.0 0.0 19.0 0.0 100.0 61.0 44.0 100.0 100.0 0.0 96.0
 100.0 100.0 0.0 100.0 0.0 96.0 0.0 0.0 100.0 0.0 100.0 0.0 100.0 100.0
 0.0 100.0 100.0 100.0 100.0 0.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0
 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0
 100.0 0.0 100.0 0.0 '.' 100.0 '.' 94.0 '.' 0.0 0.0 0.0 100.0 0.0 100.0
 100.0 100.0 100.0 0.0 100.0 0.0 '.' 100.0 '.' 0.0 0.0 '.' '.' 5.0 '.'
 100.0 '.' 100.0 100.0 84.0 100.0 100.0 100.0 100.0 100.0 95.0 100.0 100.0
 0.0 0.0 100.0 75.0 42.0 100.0 100.0 100.0 0.0 100.0 100.0 0.0 100.0 100.0
 100.0 100.0 0.0 31.0 0.0 '.' 0.0 100.0 100.0 100.0 100.0 100.0 100.0
 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0
 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0
 29.0 '.' 0.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0
 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0
 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 29.0 '.' 41.0 0.0 0.0
 100.0 100.0 100.0 '.' 0.0 '.' 3.0 100.0 100.0 0.0 100.0 100.0 100.0 0.0
 0.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 1.0 '.' 6.0 6.0 '.' 2.0 '.' 4.0 2.0 4.0 1.0 12.0 3.0 8.0 7.0 5.0 '.'
 17.0 5.0 '.' 22.0 '.' 22.0 '.' 5.0 '.' 18.0 3.0 '.' '.' 6.0 26.0 11.0
 18.0 3.0 1.0 11.0 1.0 5.0 4.0 1.0 1.0 11.0 8.0 3.0 9.0 1.0 1.0 1.0 2.0
 2.0 1.0 3.0 1.0 18.0 9.0 '.' 26.0 11.0 18.0 3.0 1.0 11.0 1.0 5.0 4.0 1.0
 1.0 11.0 8.0 3.0 9.0 1.0 1.0 '.' '.' 31.0 '.' 25.0 14.0 2.0 1.0 8.0 2.0
 9.0 2.0 6.0 2.0 5.0 3.0 1.0 11.0 1.0 1.0 4.0 7.0 '.' 8.0 2.0 9.0 2.0 6.0
 2.0 5.0 '.' 3.0 1.0 11.0 '.' 7.0 '.' 7.0 3.0 2.0 1.0 3.0 1.0 2.0 5.0 1.0
 9.0 4.0 7.0 1.0 6.0 '.' 14.0 3.0 3.0 14.0 3.0 14.0 14.0 '.' 16.0 2.0 '.'
 4.0 6.0 1.0 4.0 '.' 5.0 14.0 2.0 6.0 3.0 10.0 1.0 10.0 1.0 3.0 1.0 8.0
 33.0 25.0 4.0 3.0 2.0 12.0 20.0 1.0 1.0 12.0 12.0 2.0 7.0 8.0 3.0 18.0
 6.0 1.0 20.0 9.0 1.0 14.0 1.0 1.0 12.0 1.0 6.0 1.0 11.0 9.0 4.0 1.0 2.0
 1.0 5.0 12.0 2.0 6.0 9.0 15.0 1.0 1.0 9.0 7.0 6.0 14.0 7.0 18.0 1.0 8.0
 55.0 5.0 5.0 3.0 2.0 21.0 21.0 4.0 2.0 3.0 12.0 5.0 1.0 2.0 10.0 6.0 '.'
 7.0 6.0 5.0 5.0 9.0 7.0 8.0 2.0 13.0 1.0 3.0 9.0 2.0 3.0 4.0 8.0 4.0 4.0
 4.0 40.0 3.0 6.0 5.0 '.' 9.0 '.' 5.0 1.0 4.0 '.' 8.0 6.0 2.0 4.0 4.0 1.0
 3.0 3.0 13.0 1.0 3.0 22.0 3.0 4.0 9.0 10.0 12.0 3.0 4.0 28.0 11.0 23.0
 3.0 14.0 7.0 10.0 3.0 4.0 8.0 4.0 6.0 9.0 2.0 9.0 14.0 2.0 5.0 8.0 4.0
 16.0 18.0 14.0 22.0 1.0 11.0 1.0 4.0 3.0 26.0 6.0 6.0 1.0 13.0 16.0 8.0
 21.0 6.0 13.0 16.0 12.0 4.0 18.0 16.0 4.0 67.0 3.0 18.0 15.0 10.0 8.0 3.0
 3.0 1.0 4.0 6.0 5.0 10.0 8.0 6.0 11.0 4.0 6.0 1.0 3.0 4.0 2.0 3.0 4.0
 12.0 4.0 22.0 21.0 14.0 1.0 12.0 21.0 2.0 4.0 8.0 9.0 19.0 3.0 2.0 1.0
 3.0 2.0 2.0 1.0 9.0 14.0 4.0 1.0 2.0 4.0 2.0 27.0 1.0 1.0 1.0 2.0 18.0
 1.0 21.0 1.0 18.0 9.0 4.0 18.0 11.0 3.0 11.0 3.0 2.0 7.0 1.0 1.0 1.0 1.0
 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 '.'
 7.0 '.' 14.0 '.' 6.0 1.0 6.0 6.0 2.0 2.0 8.0 3.0 90.0 5.0 8.0 3.0 '.' 7.0
 '.' 8.0 1.0 '.' '.' 23.0 '.' 4.0 '.' 7.0 9.0 1.0 19.0 7.0 7.0 17.0 4.0
 1.0 13.0 10.0 1.0 4.0 6.0 1.0 1.0 6.0 3.0 34.0 2.0 16.0 7.0 1.0 13.0 11.0
 17.0 27.0 1.0 35.0 4.0 '.' 7.0 2.0 1.0 1.0 7.0 2.0 2.0 3.0 2.0 2.0 3.0
 2.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 2.0 3.0 2.0 2.0
 3.0 2.0 2.0 '.' 7.0 2.0 1.0 1.0 7.0 2.0 2.0 3.0 2.0 2.0 3.0 2.0 4.0 4.0
 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 2.0 3.0 2.0 2.0 3.0 2.0 2.0
 '.' 6.0 1.0 2.0 1.0 4.0 5.0 '.' 23.0 '.' 26.0 15.0 25.0 1.0 8.0 6.0 84.0
 1.0 1.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' 1114.0 327.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 53.0
 '.' 0.0 90.0 '.' '.' '.' '.' '.' '.' '.' 3130.0 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' 488.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' 82.0 '.' '.' '.' 4580.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 7032.0 '.' 7032.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' 37.0 '.' '.'
 41134.0 '.' '.' '.' '.' 597.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 6098.0 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' 0.0 '.' 2859.0 '.' '.' '.' 12103.0 '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 6214.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' 928.0 '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 3733.0 2349.0 '.' 9797.0 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 412.0 '.' 9797.0 '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' 412.0 '.' 124.0 '.' '.' '.' '.' '.' '.' 1187.0 '.' 555.0
 '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 149194105.0 '.' 196756231.0 196788860.0 '.' 248753787.0 '.'
 46992020.0 47083456.0 47096453.0 47133334.0 47157988.0 47177206.0
 47192907.0 47379719.0 47590260.0 '.' 66287088.0 66288095.0 '.' 63952692.0
 '.' 63952692.0 '.' 22847807.0 '.' 74001651.0 74003846.0 '.' '.'
 20487996.0 20613648.0 20737093.0 20767673.0 20874796.0 21038123.0
 21040700.0 21145580.0 21145766.0 21208605.0 21932513.0 22014402.0
 22051852.0 22133180.0 22195582.0 22278030.0 22368477.0 22382472.0
 22413461.0 22448239.0 22465805.0 22513228.0 22546564.0 22675147.0
 22702284.0 22736245.0 '.' 20613648.0 20737093.0 20767673.0 20874796.0
 21038123.0 21040700.0 21145580.0 21145766.0 21208605.0 21932513.0
 22014402.0 22051852.0 22133180.0 22195582.0 22278030.0 22368477.0
 22382472.0 '.' '.' 1565629.0 '.' 32163432.0 32181363.0 32264606.0
 32300867.0 32611681.0 32684850.0 32888793.0 33205546.0 33215160.0
 33262081.0 33298270.0 33571843.0 33966044.0 34264719.0 34403801.0
 34430129.0 34442319.0 34597786.0 '.' 32611681.0 32684850.0 32888793.0
 33205546.0 33215160.0 33262081.0 33298270.0 '.' 33571843.0 33966044.0
 34264719.0 '.' 34597786.0 '.' 14100118.0 14138989.0 14204397.0 14207056.0
 14934291.0 14954671.0 15008301.0 15133095.0 15154943.0 15207128.0
 15339331.0 15339331.0 15373624.0 15405577.0 '.' 34493062.0 34522267.0
 34538464.0 34581084.0 34623841.0 34746118.0 34797171.0 '.' 44171888.0
 44270938.0 '.' 242865920.0 242912833.0 242943359.0 242989834.0 '.'
 18894835.0 18900293.0 18926981.0 18957980.0 19017036.0 19023798.0
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 19166985.0 19318220.0 19420067.0 19428408.0 19434956.0 19437433.0
 19467348.0 19510546.0 19553652.0 19702025.0 19704742.0 19711061.0
 19748300.0 19770745.0 19833668.0 19863044.0 19929294.0 19951275.0
 19957418.0 20008632.0 20020661.0 20067763.0 20073268.0 20073580.0
 20099397.0 20102208.0 20103626.0 20113924.0 20119326.0 20135938.0
 20186251.0 20193854.0 20228937.0 20236656.0 20301760.0 20326419.0
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 21043842.0 21055401.0 21061978.0 21128400.0 21213294.0 21271694.0
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 21369453.0 21383006.0 21388464.0 21396680.0 21400234.0 21457304.0 '.'
 63088363.0 63263983.0 63409271.0 63638350.0 63727499.0 63804974.0
 63819545.0 63846320.0 63884074.0 63897187.0 63989697.0 63996226.0
 63997639.0 64053639.0 64064036.0 64077911.0 64089145.0 64173219.0
 64430932.0 64501329.0 64547021.0 64670545.0 65160613.0 '.' 97483364.0 '.'
 195419168.0 195426271.0 195447848.0 '.' 71552.0 124382.0 206388.0
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 7432011.0 7461754.0 7755816.0 7760440.0 7940727.0 7967053.0 8007027.0
 8201016.0 8271480.0 8321902.0 8368008.0 8442503.0 8582118.0 8594491.0
 8747121.0 8868773.0 9172134.0 9212382.0 9217130.0 9221877.0 9226621.0
 9236110.0 9245604.0 9250355.0 9255103.0 9259849.0 9264597.0 9269344.0
 9326890.0 9331636.0 9336383.0 9341128.0 9345873.0 9350618.0 9355363.0
 9360107.0 9364854.0 9369599.0 '.' 69402890.0 '.' 723194.0 '.' 89198108.0
 89312437.0 89454155.0 89688073.0 89705816.0 89754025.0 89769745.0
 89811442.0 89854613.0 90598802.0 90664447.0 90676163.0 '.' 292486.0 '.'
 29855349.0 29892368.0 '.' '.' 33397467.0 '.' 38299243.0 '.' 72726578.0
 72742163.0 72848107.0 72854735.0 72950685.0 72981866.0 73007531.0
 73082160.0 73095247.0 73097926.0 73113539.0 73125646.0 73149398.0
 73150423.0 73183326.0 73245325.0 73248919.0 73275488.0 73442502.0
 73473234.0 73498133.0 73588685.0 73605527.0 73624335.0 73645831.0
 73703736.0 73868235.0 74010294.0 74072043.0 74103270.0 '.' 7169490.0
 7170243.0 7189908.0 7194636.0 7213038.0 7272376.0 7286409.0 7308124.0
 7327829.0 7340025.0 7345200.0 7353432.0 7397148.0 7414221.0 7429516.0
 7437165.0 7572964.0 7580612.0 7588260.0 7595908.0 7603555.0 7611203.0
 7618851.0 7626498.0 7636112.0 7669241.0 7678525.0 7682660.0 7693957.0
 7705529.0 7738913.0 7752198.0 '.' 7169490.0 7170243.0 7189908.0 7194636.0
 7213038.0 7272376.0 7286409.0 7308124.0 7327829.0 7340025.0 7345200.0
 7353432.0 7397148.0 7414221.0 7429516.0 7437165.0 7572964.0 7580612.0
 7588260.0 7595908.0 7603555.0 7611203.0 7618851.0 7626498.0 7636112.0
 7669241.0 7678525.0 7682660.0 7693957.0 7705529.0 7738913.0 7752198.0 '.'
 56986129.0 56986397.0 56987150.0 57025500.0 57073467.0 57124347.0 '.'
 141035363.0 '.' 53250653.0 53262057.0 53401069.0 53432604.0 53449821.0
 53458208.0 53559056.0 53583183.0 53584152.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 149194269.0 '.' 196764537.0 196799302.0 '.' 248761001.0 '.'
 47007881.0 47088320.0 47151400.0 47133898.0 47173994.0 47181688.0
 47213477.0 47421238.0 47590995.0 '.' 66288847.0 66288847.0 '.' 64062273.0
 '.' 64062273.0 '.' 22951948.0 '.' 74022324.0 74010500.0 '.' '.'
 20496811.0 20711433.0 20747114.0 20781026.0 20961480.0 21038198.0
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 22414398.0 22448881.0 22466547.0 22513280.0 22570831.0 22675241.0
 22715728.0 22746002.0 '.' 20711433.0 20747114.0 20781026.0 20961480.0
 21038198.0 21071643.0 21145662.0 21198633.0 21255165.0 21940739.0
 22016878.0 22083259.0 22145802.0 22199978.0 22383564.0 22369561.0
 22383813.0 '.' '.' 1571297.0 '.' 32199434.0 32199434.0 32267249.0
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 33264719.0 33319296.0 33586742.0 33966140.0 34294699.0 34404762.0
 34431919.0 34479081.0 34626084.0 '.' 32626892.0 32687486.0 32896463.0
 33208179.0 33232409.0 33264719.0 33319296.0 '.' 33586742.0 33966140.0
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 64441746.0 64673676.0 64575760.0 64997143.0 65179178.0 '.' 97487074.0 '.'
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 8749448.0 8873565.0 9178456.0 9213975.0 9218723.0 9223470.0 9228214.0
 9237772.0 9247197.0 9251948.0 9256696.0 9261442.0 9266190.0 9270937.0
 9328483.0 9333229.0 9337976.0 9342721.0 9347466.0 9352211.0 9356956.0
 9361700.0 9366447.0 9370796.0 '.' 69442040.0 '.' 777000.0 '.' 89269817.0
 89312537.0 89585888.0 89705573.0 89706486.0 89770588.0 89810374.0
 89825401.0 90460254.0 90610219.0 90679134.0 90716532.0 '.' 351355.0 '.'
 29858856.0 29894992.0 '.' '.' 33397607.0 '.' 38313237.0 '.' 72742085.0
 72772634.0 72850450.0 72936623.0 72972020.0 72992909.0 73038852.0
 73086440.0 73097783.0 73112542.0 73133999.0 73125727.0 73150330.0
 73153132.0 73184600.0 73247020.0 73256846.0 73280220.0 73484237.0
 73476610.0 73536855.0 73611426.0 73605624.0 73644164.0 73668729.0
 73820265.0 74016931.0 74010353.0 74139390.0 74139390.0 '.' 7212885.0
 7177618.0 7191501.0 7196229.0 7243080.0 7274385.0 7287870.0 7321064.0
 7332604.0 7343922.0 7347115.0 7366833.0 7399972.0 7417234.0 7432528.0
 7440175.0 7575975.0 7583623.0 7591271.0 7598918.0 7606566.0 7614214.0
 7621862.0 7629510.0 7638935.0 7673238.0 7681402.0 7686575.0 7698764.0
 7718465.0 7740185.0 7753583.0 '.' 7212885.0 7177618.0 7191501.0 7196229.0
 7243080.0 7274385.0 7287870.0 7321064.0 7332604.0 7343922.0 7347115.0
 7366833.0 7399972.0 7417234.0 7432528.0 7440175.0 7575975.0 7583623.0
 7591271.0 7598918.0 7606566.0 7614214.0 7621862.0 7629510.0 7638935.0
 7673238.0 7681402.0 7686575.0 7698764.0 7718465.0 7740185.0 7753583.0 '.'
 56987065.0 56986460.0 56987833.0 57026541.0 57123832.0 57131368.0 '.'
 141061798.0 '.' 53254389.0 53350548.0 53449603.0 53432697.0 53458063.0
 53461317.0 53713664.0 53583302.0 53584235.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 14.0
 14.0 7.0 1.0 1.0 1.0 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' 14.0 14.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' 60.0 1.0 '.' '.' '.' '.' '.' '.' 59.0 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' 26.0 26.0 '.' '.' '.' '.' '.' '.' 626.0
 '.' 11.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' 9.0 '.' '.' '.' '.' '.' '.'
 10.0 3.0 '.' '.' 8.0 8.0 27.0 '.' '.' '.' 1.0 '.' '.' 27.0 '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' 3.0 '.' '.' '.' '.' 8.0 '.' 15.0 '.' '.' '.' 502.0 '.'
 '.' '.' '.' '.' '.' '.' '.' '.' 2.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 2.0 '.' '.' '.' '.' '.' '.' '.' 5.0 5.0 '.' '.'
 '.' '.' 1051.0 '.' '.' '.' '.' '.' '.' '.' '.' 61.0 '.' '.' 96.0 12.0 '.'
 '.' '.' '.' '.' 1.0 '.' '.' '.' 21.0 213.0 '.' '.' '.' '.' '.' '.' 1.0
 1.0 '.' '.' 2.0 '.' '.' '.' '.' '.' 39.0 '.' 32.0 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' 8.0 '.' '.' '.' '.' '.' '.' 4.0 '.' '.'
 '.' 76.0 2.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 12.0 '.' '.' '.' '.' 199.0 161.0 '.' '.' '.' 1.0 '.' '.' 142.0 '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' 435.0 '.' '.' '.' '.' '.' '.' '.' '.' 435.0 '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 2.0 2.0 '.' '.' 127.0 '.' 1.0 '.' '.' '.' '.' '.'
 '.' 1.0 '.' 1.0 '.' '.' '.' '.' '.' '.' '.' 124.0 18.0 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' 277.0 6.0 136.0 118.0 '.' '.' 4.0
 13.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.08 0.08 0.1822 0.1822 0.1822 '.' '.' 0.11 0.9544 0.11 0.11 0.9544 0.11
 0.11 0.11 0.11 0.11 '.' '.' '.' '.' 0.0257 '.' 0.0257 '.' 0.02 0.1799
 0.1799 0.1799 0.0828 0.15 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.39
 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.4271 0.4271 0.4271 0.4271 0.4271
 0.4271 0.4271 0.15 0.15 0.15 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.39
 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.4271 0.4271 0.0144 '.' '.' '.'
 0.1314 0.1314 0.1314 0.1314 0.8086 0.3314 0.3314 0.3314 0.3314 0.3314
 0.515 0.515 0.07 0.06 0.06 0.09 0.09 0.1875 0.07 0.8086 0.3314 0.3314
 0.3314 0.3314 0.3314 0.515 '.' 0.515 0.07 0.06 0.1875 0.1875 '.' '.' '.'
 '.' '.' 0.272 0.272 0.272 '.' '.' '.' '.' '.' '.' '.' 0.03 0.1041 0.1041
 0.0994 0.0994 0.0994 0.0994 0.03 0.17 0.17 0.5406 '.' '.' '.' '.' 0.0951
 '.' 0.0355 0.0355 0.0355 0.01 0.01 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0509 0.0509
 0.0509 0.0509 0.0509 0.0509 0.0509 0.0509 0.0509 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.01 0.01 0.01 0.01 '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' 0.03 0.4682 0.4682 0.0556 '.' 0.01 '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145
 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145
 0.1145 0.1145 0.1145 0.1145 0.4178 0.4178 0.1231 0.1231 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.6839 0.6839 0.1073 0.1073 0.1073
 0.3704 '.' '.' 0.01 0.01 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355
 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355
 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355
 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355
 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355
 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355
 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.3041 0.3041 0.4486 0.4486 0.4486 0.2767 0.2767 0.026 0.026 0.026 0.026
 0.026 0.04 0.04 0.04 0.026 0.0318 '.' '.' '.' '.' 0.01 '.' 0.01 '.'
 0.0107 0.8135 0.8135 0.8135 0.2438 0.1 0.271 0.271 0.271 0.271 0.271
 0.271 0.271 0.271 0.271 0.271 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13
 0.13 0.13 0.13 0.13 0.13 0.1 0.1 0.1 0.13 0.271 0.271 0.271 0.271 0.271
 0.271 0.271 0.271 0.271 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.168 '.'
 '.' '.' 0.1692 0.1692 0.23 0.23 0.23 0.23 0.1692 0.0715 0.0715 0.1243
 0.1243 0.1243 0.05 0.01 0.01 0.01 '.' 0.01 0.0715 0.23 0.23 0.1692 0.0715
 0.0715 0.1243 0.1243 '.' 0.1243 0.05 0.01 0.01 0.01 0.01 0.01 0.01 0.01
 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 '.' 0.0982 0.15
 0.15 0.0982 0.1 0.0982 '.' 0.07 0.07 0.2994 0.0686 0.0686 0.0686 0.0804
 0.0804 '.' 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01
 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01
 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01
 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.0959 0.0959 0.0959 0.0284 0.0189
 0.03 0.03 0.0118 0.0604 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01
 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' 0.01 0.01 0.03 0.0746 0.0746 0.0746 '.' 0.01 0.01 0.01 0.01
 '.' 0.01 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' 0.01 0.01 0.01 0.01 '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.01 0.01
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.01 '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.01 0.01 '.' '.'
 0.01 '.' '.' '.' '.' '.' '.' '.' '.' 0.01 0.01 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' 0.01 0.01 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' 1.0 1.0 1.0 1.0 1.0 0.013 0.013 0.013 0.013 0.013
 0.013 0.013 0.013 0.013 0.013 0.013 0.013 0.013 0.013 0.013 0.013 0.013
 0.8518 0.8518 0.0497 0.0497 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' 0.187 0.187 0.4519 0.4519 0.4519 0.4631 '.' '.' '.' 0.01 '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.01 '.' '.' '.' '.'
 0.01 '.' 0.01 0.01 0.01 0.01 '.' '.' '.' '.' '.' 0.2237 0.2237 0.2237
 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237
 0.2237 0.5803 0.4842 0.4842 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237
 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.3262 0.5182
 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237
 0.2237 0.2237 0.2237 0.2237 0.5803 0.4842 0.4842 0.2237 0.2237 0.2237
 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237
 0.2237 0.3262 0.5182 '.' '.' '.' '.' '.' '.' '.' 0.01 0.01 '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.4999 0.4999 0.3095 0.3095 0.3095 0.4394 0.4394 0.0179 0.0179 0.0179
 0.0179 0.0179 0.0179 0.0179 0.0179 0.0179 0.0179 0.432 0.432 0.432 0.107
 0.107 0.107 0.107 '.' '.' 0.0264 0.0264 0.0264 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' 0.157 0.157 0.157 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996
 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996
 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996
 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.2252 0.2252 0.2252 0.2252 0.2252
 0.2252 0.2252 0.2252 0.2252 0.2252 0.2252 '.' '.' '.' '.' '.' 0.1686
 0.1686 0.1686 0.1686 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801
 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801
 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801
 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801
 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.1686 0.1686 0.1686 0.1686
 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686
 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686
 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.3422 0.3422
 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422
 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422
 0.3422 0.3422 0.3422 0.3422 0.1142 0.1142 0.1142 0.1142 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144
 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144 0.1474 0.1474 0.1474 0.1474
 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474
 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474
 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474
 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474
 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474
 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474
 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474
 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1946 0.1946 0.2771
 0.2771 0.5483 0.5483 0.5483 0.5483 0.5483 0.5483 0.5483 0.5483 0.5483
 0.5483 0.5483 0.5483 0.5483 '.' '.' 0.3871 0.3871 0.3871 0.1414 0.381
 0.381 0.381 0.381 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5
 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' 0.128 0.128 0.128 0.128 0.128 0.128 0.128 0.128 0.128 0.128]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.455 '.' 0.35 '.' '.' 0.305 '.' 0.415 '.' '.' '.' '.' '.' '.' '.' '.'
 '.' 0.565 '.' '.' 0.53 '.' 0.53 '.' 0.25 '.' 0.42 '.' '.' 0.355 0.38 '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' 0.31 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' 0.34 0.52 '.' 0.225 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.255 '.' '.' '.' '.' '.'
 '.' '.' 0.43 '.' '.' '.' 0.385 '.' 0.505 '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 0.435 '.' '.' '.' '.' '.' '.' '.' 0.38 '.' '.'
 0.4 '.' '.' '.' '.' 0.445 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.355 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 0.455 '.' 0.47 '.' '.' '.' 0.445 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' 0.4 '.' 0.395 '.' 0.335 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' 0.365 '.' 0.375 '.' '.' 0.325 0.325 '.' 0.365 '.' 0.37 '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.26 '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 0.26 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' 0.41 '.' '.' '.' '.' '.' '.' 0.535 '.' 0.42 '.' '.' '.' '.'
 '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.44 '.' 0.285 '.' '.' 0.33 '.' 0.5 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 0.545 '.' '.' 0.43 '.' 0.43 '.' 0.39 '.' 0.38 '.' '.' 0.425 0.455 '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 0.275 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 0.66 0.5 '.' 0.335 '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.275 '.' '.' '.' '.' '.' '.'
 '.' 0.365 '.' '.' '.' 0.335 '.' 0.42 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' 0.515 '.' '.' '.' '.' '.' '.' '.' 0.46 '.' '.' 0.46
 '.' '.' '.' '.' 0.32 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.43 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.335
 '.' 0.415 '.' '.' '.' 0.425 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 0.365 '.' 0.58 '.' 0.275 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 0.315 '.' 0.51 '.' '.' 0.27 0.37 '.' 0.32 '.' 0.355 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' 0.33 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' 0.33 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' 0.33 '.' '.' '.' '.' '.' '.' 0.38 '.' 0.295 '.' '.' '.' '.' '.' '.'
 '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
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 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' 30.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' 3.0 30.0 '.' '.' '.' '.' '.' '.' 3.0 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' 3.0 3.0 '.' '.' '.' '.' '.' '.' 1.0 '.'
 30.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' 30.0 '.' 0.0 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' 30.0 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' 30.0 '.' '.' '.' '.' '.' '.' 30.0 1.0 '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 30.0 '.' '.' '.' '.' 3.0
 '.' '.' '.' '.' 30.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' 30.0 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' 30.0 '.'
 '.' '.' '.' '.' 0.0 0.0 3.0 '.' 0.0 '.' '.' 30.0 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 30.0 30.0 '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 3.0 '.' '.' '.' '.'
 30.0 '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 30.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' 3.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' 3.0 '.' 0.0 '.' '.' '.' '.' '.' 0.0 '.' 0.0 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' 30.0
 3.0 3.0 3.0 3.0 '.' '.' 0.0 0.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.'
 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' 0.0 0.0 0.0 '.' 0.0 '.' '.' 0.0 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.'
 0.0 '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' 0.0 '.' 0.0 '.' '.' '.' '.' '.' 0.0 '.' 0.0 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' 0.0
 '.' 0.0 0.0 0.0 '.' '.' 0.0 0.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 98.26 98.26 92.58 92.08 92.08 89.5 82.54 66.73 '.' '.' 75.66 89.5
 '.' '.' '.' 67.28 40.7 67.28 81.13 81.13 81.13 81.13 '.' '.' 85.75 85.75
 79.11 '.' 93.81 '.' '.' 93.81 '.' '.' '.' 92.58 '.' '.' '.' '.' '.' 91.86
 '.' '.' '.' 76.23 75.33 '.' '.' '.' '.' '.' '.' '.' 93.48 93.81 '.' 93.81
 '.' '.' '.' 92.58 '.' '.' '.' '.' '.' 91.86 '.' '.' '.' 76.23 75.33 '.'
 69.24 69.24 94.39 '.' '.' 92.49 '.' '.' 94.39 '.' 91.96 '.' 92.24 '.' '.'
 '.' '.' '.' '.' '.' '.' 94.39 '.' 94.39 '.' 91.96 '.' 92.24 '.' '.' '.'
 '.' '.' '.' '.' 96.58 60.22 96.58 42.95 '.' '.' '.' '.' 40.48 '.' 59.06
 86.77 52.33 '.' 49.2 94.43 94.43 88.85 84.65 '.' 88.49 93.12 93.73 16.23
 16.23 '.' '.' '.' '.' '.' '.' 97.89 61.1 45.38 '.' '.' '.' 39.12 '.' '.'
 33.13 65.74 '.' 46.07 72.86 19.48 54.99 70.45 '.' '.' 8.4 50.93 '.' '.'
 '.' 78.01 4.92 48.57 '.' 72.21 40.8 '.' 54.56 51.91 '.' 5.07 '.' '.'
 68.23 '.' 8.76 '.' 37.82 '.' '.' '.' 35.77 '.' 79.33 97.89 '.' 94.16 '.'
 '.' 90.21 '.' '.' '.' 86.28 70.17 41.2 24.41 '.' '.' 35.17 68.88 61.36
 4.35 '.' 38.59 32.82 50.87 '.' '.' 76.26 74.02 '.' '.' '.' '.' 68.54 '.'
 27.35 '.' 66.14 '.' 68.54 7.39 '.' 17.72 '.' '.' 8.63 '.' '.' '.' 19.72
 '.' '.' '.' 31.58 '.' '.' '.' 10.16 10.16 95.22 '.' '.' 95.22 '.' 93.0
 '.' '.' 90.28 89.36 '.' '.' 96.95 73.18 '.' '.' 31.26 '.' '.' 77.92 '.'
 41.81 '.' 57.56 66.55 72.33 68.02 74.45 69.73 61.34 88.48 '.' '.' 77.93
 '.' '.' 30.46 '.' 7.13 81.41 80.2 86.49 41.08 60.14 92.5 6.4 63.78 '.'
 '.' 62.86 '.' '.' 40.87 74.11 46.58 51.38 '.' 65.21 '.' 46.49 63.75 81.36
 63.94 46.84 74.85 '.' 76.1 77.79 '.' 7.59 38.82 76.68 76.94 75.35 81.97
 93.6 '.' 68.35 '.' 80.7 73.9 65.63 89.21 '.' 39.55 '.' '.' '.' '.' '.'
 1.21 '.' 76.44 39.31 96.4 74.81 72.76 43.19 '.' 98.01 52.99 '.' '.' 33.79
 50.29 83.66 78.84 '.' '.' '.' 89.8 84.97 72.47 62.19 58.66 '.' '.' 53.19
 50.3 '.' 69.5 '.' 96.06 '.' '.' 70.06 '.' 63.64 '.' 89.77 70.02 '.' 82.99
 87.71 91.64 75.68 '.' 66.38 98.14 88.87 92.38 91.28 93.57 88.6 91.84 91.4
 89.82 92.3 93.14 90.3 94.26 92.83 92.3 93.97 94.31 95.78 94.78 '.' 94.83
 '.' 87.45 87.45 98.37 98.37 38.97 '.' '.' '.' 5.94 '.' 38.68 38.97 28.58
 25.58 '.' 10.63 '.' 38.68 38.68 '.' '.' '.' '.' 17.13 17.13 '.' '.' 88.46
 55.55 65.69 46.95 23.74 28.63 30.81 36.45 64.11 80.16 '.' 22.82 '.' '.'
 76.55 33.46 23.72 '.' '.' 8.62 '.' 19.66 21.78 '.' 88.46 14.42 47.98
 47.51 '.' 33.5 '.' 99.72 '.' '.' '.' '.' 91.1 99.72 85.97 89.4 95.66
 93.29 90.95 91.71 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 92.48 90.61 90.45 96.98 97.15 93.4 97.87 99.72 '.' '.' '.' '.' 91.1 99.72
 85.97 89.4 95.66 93.29 90.95 91.71 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' 92.48 90.61 90.45 96.98 97.15 93.4 97.87 78.38 29.1 '.'
 '.' 78.38 15.18 47.62 53.39 53.39 75.6 11.71 26.16 14.23 '.' 75.6 21.63
 10.58 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 -0.648300458519823 -0.648300458519823 -1.23986898178133 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 -1.52736818830718 -1.52736818830718 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' -2.62354415217069 -2.62354415217069
 -2.62354415217069 -2.62354415217069 '.' '.' '.' '.' -2.62354415217069 '.'
 -2.62354415217069 -2.62354415217069 -2.62354415217069 '.'
 -2.62354415217069 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' -0.807902299547855 '.' '.' '.' '.' '.' '.' '.' '.'
 -2.62354415217069 '.' '.' -2.62354415217069 -2.62354415217069
 -2.51547904504873 -2.62354415217069 -2.53806827104914 '.' '.'
 -2.57292784443109 '.' '.' '.' '.' '.' -2.62354415217069 -2.62354415217069
 '.' -2.62354415217069 -2.62354415217069 '.' -2.62354415217069
 -2.62354415217069 '.' -2.46581011772843 '.' '.' -2.62354415217069 '.'
 -2.62354415217069 '.' -2.62354415217069 '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' -1.30437956536809 -1.42333559636086
 -1.60479766897668 '.' '.' '.' '.' -1.06265755233802 -1.39880243235913
 -0.928255048107525 '.' -1.14442881641699 -1.25119505668143
 -1.44618961523547 '.' '.' -1.8606303493434 -0.807902299547855 '.' '.' '.'
 '.' 0.730304227093642 '.' '.' '.' 0.0947592166796515 '.' '.'
 0.226822637024357 '.' 0.730304227093642 '.' '.' 0.167507008532066 '.' '.'
 '.' 0.557303960601498 '.' '.' '.' -1.39811826175974 '.' '.' '.'
 0.309918017790144 0.309918017790144 '.' '.' '.' '.' 1.29231994213647 '.'
 '.' '.' 0.287750339613682 -0.117374836114298 '.' '.' '.'
 0.208571775574472 '.' '.' -1.62508422066579 '.' '.' -2.62354415217069 '.'
 1.08104400698142 '.' 0.307891021887021 1.00920516918233 0.68130369659025
 0.720690705407562 0.0296456908307138 -1.6058292542185 0.15762668797229
 -1.10887487197032 '.' '.' 0.386184284132793 '.' '.' 0.372261467334061 '.'
 0.506320833777115 '.' '.' '.' -0.996144409589105 '.' -0.738565549612952
 -0.683349552436101 0.214548231055587 '.' '.' 0.0789021097033232 '.' '.'
 0.098456637925367 1.28008098953073 0.701548607121356 0.152551047660427
 '.' -0.0027219090002731 '.' 0.675314441657105 0.047435784931723
 0.0037689132250533 0.0147924168443993 0.415100440885564 0.411355639726539
 '.' '.' -1.99297870008351 '.' -0.672019089975884 '.' 0.764664139864726
 -2.62354415217069 '.' -0.901439467568047 '.' '.' '.' '.'
 0.337011959699387 '.' -1.04982790537607 -0.48130989574319
 -0.025549754331335 0.843231894587517 '.' '.' '.' '.' '.' 0.15460042661567
 '.' -0.6295570831736 -0.246593908057665 '.' -0.675336787286134
 -2.57221447207538 -2.45831687825306 '.' 0.369490376960693
 0.975078008148592 '.' '.' 0.279433736423428 0.338434929038259
 -1.20308868163847 0.686792213866423 '.' '.' '.' -0.0213485169134644
 0.629248196007981 '.' 0.495223937339359 0.38643088540431 '.' '.'
 0.052084742182682 0.649976625334672 '.' 1.29231994213647 '.'
 -0.246463271906552 '.' '.' -2.62354415217069 '.' 0.337838438332487 '.'
 -0.370323251116391 -0.536935947037787 '.' -2.37227679543374
 -2.36525961978995 -2.62354415217069 -2.62354415217069 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' 0.855259196084686 '.' '.' '.' 0.855259196084686 '.'
 -0.0315707309390069 0.478729015674934 '.' '.' '.' 0.745040589608255 '.'
 '.' '.' '.' '.' '.' '.' -2.43637392050626 -2.43637392050626 '.' '.'
 1.77201404347458 '.' '.' 0.247827425263201 1.02239565516008
 1.05583278690403 -0.199291215312469 0.942636989769333 '.'
 0.717396479665947 '.' 0.950800964625408 '.' '.' 0.643446275430498
 0.332553044404404 0.563064431580096 '.' '.' 0.1188507761401 '.'
 0.623604739936053 0.339580839486745 '.' 0.592710857132059
 0.200864992787726 1.014608801418 1.77201404347458 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.98432298330431 0.98432298330431 '.'
 '.' 0.159444434408663 0.393657994766781 0.447428062348521
 0.107633755409335 0.107633755409335 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 0.663432885116562 0.663432885116562 0.616417349113344 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 -0.448946429663129 -0.448946429663129 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' -0.276965016632095 -2.20885612270982
 -2.20416703243077 -0.276965016632095 '.' '.' '.' '.' -1.55852578268999
 '.' -1.25885348060374 -2.24141606178004 -2.53125239294469 '.'
 -2.53125239294469 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' -1.20830830104818 '.' '.' '.' '.' '.' '.' '.' '.'
 -2.53125239294469 '.' '.' -2.53125239294469 -2.53125239294469
 -2.53125239294469 -2.53125239294469 -2.53125239294469 '.' '.'
 -2.53125239294469 '.' '.' '.' '.' '.' -2.53125239294469 -2.53125239294469
 '.' -2.53125239294469 -2.53125239294469 '.' -2.53125239294469
 -2.53125239294469 '.' -2.53125239294469 '.' '.' -2.53125239294469 '.'
 -2.53125239294469 '.' -2.53125239294469 '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' -1.89912490049618 -1.93669033911618
 -1.94085802577819 '.' '.' '.' '.' -1.49456297636655 -1.53414994058354
 -1.20830830104818 '.' -1.26664892202732 -1.28020537251329
 -1.52989215323949 '.' '.' -1.51336493990188 -1.26588610868392 '.' '.' '.'
 '.' 1.22944963357105 '.' '.' '.' -0.338299474644844 '.' '.'
 -2.4455441384945 '.' 0.636006512326363 '.' '.' 0.979835184836382 '.' '.'
 '.' 1.22944963357105 '.' '.' '.' -0.477054147176997 '.' '.' '.'
 -0.416168538751037 -0.416168538751037 '.' '.' '.' '.' 1.20702378077388
 '.' '.' '.' 0.450417704041247 -1.63248668554434 '.' '.' '.'
 -1.00399823985698 '.' '.' -0.147567114346182 '.' '.' -2.53125239294469
 '.' 0.21167380707342 '.' -0.276081088005473 -1.32268830826731
 -0.684900012122083 -0.962987167732907 -0.811800830743971
 -1.19882139820352 -0.095835364724166 -0.266612828851805 '.' '.'
 -0.507819648222944 '.' '.' -0.687680790971782 '.' -1.33825481458672 '.'
 '.' '.' -0.44060461568473 '.' -1.04002887445022 -0.392116289350703
 -0.175454101774909 '.' '.' 0.586448065563417 '.' '.' 0.547035422647778
 -0.213680271829885 -0.365908352795815 -0.352633837012323 '.'
 -0.788064481059993 '.' -0.278968200252929 0.578303279433319
 0.175301121417126 -0.755069155443864 -0.0353582367682211
 0.128499204561582 '.' '.' -1.29609278714656 '.' 1.20702378077388 '.'
 0.714317785060336 0.291115018050139 '.' -1.0008332959639 '.' '.' '.' '.'
 0.333342940376347 '.' 0.837810587333259 0.452744382601107
 0.153242929586267 0.108678775214296 '.' '.' '.' '.' '.' 0.172845644735031
 '.' 0.0670299843738293 0.0285262483698947 '.' -0.144705826949755
 -0.38737545040403 -0.486186941840208 '.' 0.371330581311454
 0.865866943304307 '.' '.' 0.30418592454869 0.422718688109719
 -0.039423685654856 0.236901723651345 '.' '.' '.' -0.684657921159283
 0.195831367621135 '.' -0.201270287076057 0.788716334548764 '.' '.'
 -0.284361515719772 -1.27240513662323 '.' 0.27620541213653 '.'
 -0.572766431683099 '.' '.' -0.232673834093773 '.' -0.499016330621921 '.'
 -0.462112374732113 -0.623131034083341 '.' -0.95101441383295
 -1.15479952515637 -1.33186842996177 -1.41032367542656 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' 1.02927857149332 '.' '.' '.' 1.02927857149332 '.'
 0.414676882744812 0.798950378312061 '.' '.' '.' 1.00834122048279 '.' '.'
 '.' '.' '.' '.' '.' -2.53125239294469 -2.53125239294469 '.' '.'
 0.0159631069818757 '.' '.' -1.18776035129969 0.0159631069818757
 -0.553040364632404 -0.922199212243606 -0.774220086661663 '.'
 -0.500797326082256 '.' -0.794674734358171 '.' '.' -0.675433866559718
 -0.966715148489597 -0.809178554455325 '.' '.' -1.61408470478924 '.'
 -0.79212126645541 -0.49261121282204 '.' -0.653878691847743
 -0.430045328414053 -0.895566510532316 -0.0325005901648791 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.46663829854876
 -0.0464637247715686 '.' '.' 0.46663829854876 -2.53125239294469
 0.400234098889925 -1.97676981971355 -1.97676981971355 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 0.155145712015149 0.155145712015149 -0.188374414893838 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 -0.844654865976432 -0.844654865976432 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' -1.64032033771268 -2.47162789907313
 -2.47162789907313 -1.64032033771268 '.' '.' '.' '.' -2.47162789907313 '.'
 -2.47162789907313 -2.47162789907313 -2.47162789907313 '.'
 -2.47162789907313 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' -0.791505674827999 '.' '.' '.' '.' '.' '.' '.' '.'
 -2.47162789907313 '.' '.' -2.47162789907313 -2.47162789907313
 -2.47162789907313 -2.47162789907313 -2.47162789907313 '.' '.'
 -2.47162789907313 '.' '.' '.' '.' '.' -2.47162789907313 -2.47162789907313
 '.' -2.47162789907313 -2.47162789907313 '.' -2.47162789907313
 -2.47162789907313 '.' -2.47162789907313 '.' '.' -2.47162789907313 '.'
 -2.47162789907313 '.' -2.47162789907313 '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' -1.51976012533128 -1.61173791689534
 -1.599983320827 '.' '.' '.' '.' -1.03231231326932 -1.19910660480315
 -0.791505674827999 '.' -0.922844550293754 -0.946080819110286
 -1.19895133869269 '.' '.' -1.2805127161158 -1.04316708587741 '.' '.' '.'
 '.' 1.15014257139245 '.' '.' '.' -0.173049359454575 '.' '.'
 -1.79937886551949 '.' 0.862222958307612 '.' '.' 0.835574002005388 '.' '.'
 '.' 1.15014257139245 '.' '.' '.' -0.711187689176027 '.' '.' '.'
 -0.151628993663861 -0.151628993663861 '.' '.' '.' '.' 1.11611247300207
 '.' '.' '.' 0.400052517453145 -1.22454087327741 '.' '.' '.'
 -0.667367098831187 '.' '.' -0.732640703348332 '.' '.' -2.47162789907313
 '.' 0.50450224433182 '.' -0.0592308346427654 -0.753758448502777
 -0.281672783681246 -0.540807434627598 -0.614175007315312
 -1.40825779214199 0.0269779205648351 -0.582493556461374 '.' '.'
 -0.233252267365632 '.' '.' -0.398820302991302 '.' -0.894129278429717 '.'
 '.' '.' -0.660904930034766 '.' -0.98783763752124 -0.538573860699497
 -0.0279109913872425 '.' '.' 0.486612084123194 '.' '.' 0.555421231184509
 0.298427608261686 0.0332648069020548 -0.186392860565083 '.'
 -0.590406277851698 '.' 0.0738937137831485 0.446297134803958
 0.165045961017247 -0.557230884715189 0.160620922610348 0.297239579860913
 '.' '.' -1.46605851541056 '.' 0.455761090475751 '.' 0.923141277111761
 -2.47162789907313 '.' -1.03424805406881 '.' '.' '.' '.' 0.48201697995522
 '.' 0.0401032398207032 0.130333981724112 0.138678963648336
 0.455109011286475 '.' '.' '.' '.' '.' 0.256065903692486 '.'
 -0.200045256499347 -0.063872653370671 '.' -0.333473000003108
 -1.26125942639438 -1.27538361497834 '.' 0.517389412359409
 1.11611247300207 '.' '.' 0.420298457025828 0.476236130280707
 -0.514512683951566 0.49521306481059 '.' '.' '.' -0.478383965590741
 0.447874019110796 '.' 0.0915777485634488 0.774883176364413 '.' '.'
 -0.145832700564166 -0.777477966060391 '.' 0.660060919341019 '.'
 -0.498050358907741 '.' '.' -1.98456571684452 '.' -0.246989921895573 '.'
 -0.471672769326771 -0.644700690991608 '.' -1.44715983267575
 -1.59282400997772 -1.94147419136763 -1.95519140378666 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' 1.26063232799998 '.' '.' '.' 1.26063232799998 '.'
 0.420940108293089 0.929744998199481 '.' '.' '.' 1.19108832249232 '.' '.'
 '.' '.' '.' '.' '.' -2.47162789907313 -2.47162789907313 '.' '.'
 0.491444562429841 '.' '.' -0.895389454591556 0.395552906953086
 -0.0819162539430506 -0.751016280020485 -0.327638361779731 '.'
 -0.15204008716984 '.' -0.324619004824717 '.' '.' -0.327510119466819
 -0.688425296234703 -0.46244511082827 '.' '.' -1.04153334326364 '.'
 -0.396805714672051 -0.247951312124761 '.' -0.292110083865967
 -0.225638310792768 -0.401705936344982 0.491444562429841 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.586548999968454
 0.36681079114905 '.' '.' 0.524682444320288 -2.47162789907313
 0.586548999968454 -1.34878674017516 -1.34878674017516 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 1.07662990621103 0.6684477327677 1.07662990621103
 0.553342166544692 0.553342166544692 -2.98697085794417 -3.10473776124822
 -2.98697085794417 '.' '.' '.' '.' '.' '.' '.' 0.635599914039232
 0.0819191978639822 0.635599914039232 1.02618176351368 1.02618176351368
 1.02618176351368 1.02618176351368 '.' '.' 2.96959666946894
 -0.328810289068687 2.96959666946894 '.' 2.22375841006203 '.' '.'
 0.630577750419089 '.' '.' '.' 2.22375841006203 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' -0.271906921498889 '.' '.' '.' '.' '.' '.' '.' '.'
 2.22375841006203 '.' 0.630577750419089 '.' '.' '.' 2.22375841006203 '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' -0.271906921498889 '.'
 -0.922111894578121 -0.922111894578121 1.56757328357025 '.' '.'
 1.56757328357025 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 3.6772325764896 0.16322796385632 1.67462394349301 3.6772325764896 '.' '.'
 '.' '.' -0.424806725478425 '.' 0.241972873531725 -0.193191475026352
 0.433099426603836 '.' 0.622094281610252 2.42746656950142 2.42746656950142
 '.' 1.02068766819866 '.' '.' '.' 1.8673923772413 -0.71959827485963
 -0.71959827485963 '.' '.' '.' '.' '.' '.' 2.94244265911253
 -0.678746019468492 0.360135634788785 '.' '.' '.' -0.375038933750903 '.'
 '.' -0.184731887964386 1.18735715980007 '.' 0.459211010381399
 -0.597972033048653 -0.543665561522748 0.0822917398873284
 0.128056348383697 '.' '.' 0.554183575869215 2.94244265911253 '.' '.' '.'
 -0.002241469611443 2.36782594176173 -0.373621593221624 '.'
 0.348188483468328 0.465852147917107 '.' 0.425870777992255
 1.46130508236304 '.' 0.690563071344625 '.' '.' -1.98609532754524 '.'
 -1.04492215962902 '.' -0.408428770523539 '.' '.' '.' -0.800223805913347
 '.' 0.698499439551705 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 2.28676628831896 '.' -0.0046056816669864 0.672972182845271 '.' '.'
 1.20573288011437 -0.289055396385536 1.58078637399342 0.477351976371369
 '.' 0.687283106386744 0.246895000414255 -1.50983365445593 '.' '.'
 -0.990180484365383 -0.387275128092876 '.' '.' '.' '.' 0.85336181383742
 '.' -0.433167561551584 '.' -0.0258588646723899 '.' '.' -0.696357556154856
 '.' 0.85336181383742 '.' '.' -0.764855351937167 '.' '.' '.'
 0.337534415605819 '.' '.' '.' -0.797615479905467 '.' '.' '.'
 -0.139439307213778 -0.139439307213778 '.' '.' '.' '.' 3.21047317301589
 -2.08573739588537 '.' '.' -1.34614550091757 0.724425471954094 '.' '.'
 -1.7693057852588 1.49327706340249 '.' '.' -0.18186725937295 '.' '.'
 -0.841325117744977 '.' -1.15521787576548 '.' -0.123982055433658
 -1.09712093422474 -0.335178666431938 -0.885541042446365
 -0.960716353370505 -0.0473365386141676 -1.06125182633592 0.70441463212366
 '.' '.' 0.982292085246316 '.' '.' -0.219318263143712 '.'
 -0.194585519191658 -1.108132588085 2.60422559153241 -0.576730190868019
 -0.443208130978936 1.8774465029651 -1.00228696058413 -2.22163439002498
 -1.46983950545222 '.' '.' -0.704500724266535 '.' '.' -0.17378562567541
 0.0230368692484615 -0.527208917402428 -0.362920265024982 '.'
 -0.457051628812482 '.' 0.142993789011855 -0.738211104213101
 0.837642525932054 -0.774788091773142 1.55687904782076 -3.22135273058939
 '.' -0.287444310372334 -0.226834639209249 '.' -0.292338464564844
 0.0606051954062481 -0.25533666429365 -2.1421417021426 -2.68253992069213
 -0.233147203181143 '.' '.' 3.21047317301589 '.' 0.532976598896309
 0.701580942281967 0.075048187998812 -0.597063638061633 0.898629456776545
 -0.165997903989801 '.' '.' '.' '.' '.' 1.56448356794936 '.'
 0.45277691276168 -2.65953872619111 '.' -1.44193705805358
 -0.471176482163648 0.0326224850029478 '.' -2.62911053265251
 0.172471674763915 '.' '.' '.' -0.54023780146542 0.311204487601666
 0.837271434822507 '.' '.' '.' 0.251281715605183 1.72296511806951
 2.75338717063303 -1.04317795810088 -0.521938260031064 '.' '.'
 0.664832774210228 0.934834224809331 '.' -1.05139548669208 '.'
 -1.4518704411588 '.' '.' -1.13990389227529 '.' -1.59029981969928 '.'
 -2.08522134689875 0.667359866413857 '.' -0.0042423849773584
 -0.488109075837714 -0.663631774481401 -2.6391793475309 '.'
 1.46868520416757 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' 0.741987855668132 0.741987855668132
 0.535222227518795 0.535222227518795 1.13380694792028 '.' '.' '.'
 -1.0886019180172 '.' 1.13380694792028 0.494543657071353
 0.0616099264393714 '.' '.' 0.196967347879621 '.' -1.35330421932959
 -1.35330421932959 '.' '.' '.' '.' -0.989035894351638 -0.989035894351638
 '.' '.' 2.70903614483931 0.317380023327075 1.49986407027643 '.'
 -0.902054979760057 -0.44503506022657 0.200201742907301 0.58127606528246
 -0.0288746954043306 1.08623431117684 '.' 1.10438995088098 '.' '.'
 1.09331776236833 2.70903614483931 -0.0167724140747313 '.' '.'
 -0.09395744769762 '.' -0.48782967368913 -0.250271670703448 '.'
 0.385787155434006 -0.430513909559958 -0.746648021563001 0.977775575032158
 '.' 0.964550444182401 '.' 2.14121257165536 '.' '.' '.' '.'
 -1.59751875296103 '.' '.' 2.14121257165536 '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.918523398770926
 0.676417083229402 1.33624136747443 0.140072348156658 '.' 1.12959151611996
 2.14121257165536 '.' '.' '.' '.' -1.59751875296103 '.' '.'
 2.14121257165536 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' 0.918523398770926 0.676417083229402 1.33624136747443
 0.140072348156658 '.' 1.12959151611996 2.2343517715388
 -0.0133102053832282 '.' '.' 2.2343517715388 -0.349819812502603
 -0.725400991144389 -0.190632175596259 -0.190632175596259
 0.807946261414963 -1.20041549946446 -0.257046228208263 -0.112682658348456
 '.' 0.80408198011521 0.807946261414963 -1.65771922174252 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 1.30887789301822 0.697024247535932 1.30887789301822
 -0.565086620797697 -0.565086620797697 -2.90416172871297 -3.32991530871711
 -2.90416172871297 '.' '.' '.' '.' '.' '.' '.' 1.04727080312339
 0.0377121632347663 1.04727080312339 1.66555804568279 1.66555804568279
 1.66555804568279 1.66555804568279 '.' '.' 4.05533207481267
 -0.503765753071617 4.05533207481267 '.' 2.58284576037233 '.' '.'
 0.0606178603183018 '.' '.' '.' 2.58284576037233 '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' -0.565772314050669 '.' '.' '.' '.' '.' '.' '.' '.'
 2.58284576037233 '.' 0.0606178603183018 '.' '.' '.' 2.58284576037233 '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' -0.565772314050669 '.'
 -1.23259677674915 -1.23259677674915 2.11426077975333 '.' '.'
 2.11426077975333 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 4.17517843763452 0.511864222455301 1.73432863871862 4.17517843763452 '.'
 '.' '.' '.' 1.07197498670855 '.' -0.405588628410555 0.152950560142403
 0.962176598220999 '.' 0.322678575541803 2.41694262394586 2.41694262394586
 '.' 1.31010018701924 '.' '.' '.' 2.14567117504116 0.443929223699058
 0.443929223699058 '.' '.' '.' '.' '.' '.' 5.29477062168781
 -0.22775445384527 0.772811927860626 '.' '.' '.' 0.817637812863819 '.' '.'
 1.02819617031079 0.932740471460801 '.' 1.99698466418685 -1.19469008098196
 3.98018572942351 -0.450618700229176 0.836381939603491 '.' '.'
 1.2901097836858 3.34022892264706 '.' '.' '.' 0.855158778511627
 3.38001100960461 0.590344002361273 '.' 0.327140414338646
 0.557839148920189 '.' -0.701931719398633 0.279301120222081 '.'
 4.03153091509844 '.' '.' -0.363927890852326 '.' 2.06932219421127 '.'
 2.39258092860216 '.' '.' '.' 1.18081437151802 '.' 0.174075190759776 '.'
 '.' '.' '.' '.' '.' '.' '.' '.' 2.39892044394279 '.' 2.85964800561254
 2.65389095774821 '.' '.' 5.29477062168781 -0.349034099945665
 -0.841707455415557 3.00980268645085 '.' 1.33036583543754
 0.909128978651125 1.16392737773964 '.' '.' -0.63060581685217
 -1.12481109733158 '.' '.' '.' '.' 2.61388539526619 '.' -0.551647400212283
 '.' -1.1196806141136 '.' '.' 1.21996216564798 '.' 0.386394557252369 '.'
 '.' 1.81088903222596 '.' '.' '.' 2.61388539526619 '.' '.' '.'
 0.510431064472241 '.' '.' '.' -0.254839803839483 -0.254839803839483 '.'
 '.' '.' '.' 5.41905620095129 -0.684191486481177 '.' '.' -3.06736199452323
 -0.520531332003985 '.' '.' -2.76319865584382 -0.0905757042419409 '.' '.'
 -0.360251650665831 '.' '.' -1.07172517579562 '.' 2.22110482517757 '.'
 0.739036799993362 -0.06853474623291 -0.288196719712539 0.113301977907898
 -0.560975494729554 0.337473103766752 -0.304110728864919
 -0.142173437306223 '.' '.' 0.77606556285772 '.' '.' 4.00265992091985 '.'
 3.59552380294204 -3.07621828146639 2.66896012411798 -0.56780381579822
 0.50373477013136 0.292414150336672 -1.35276544118498 1.36559781959522
 1.90036967420169 '.' '.' 2.35326609523799 '.' '.' 2.72200675038499
 -1.08931776314455 -2.11601983727089 1.29214097300775 '.'
 -0.248524904723244 '.' 1.01071894719792 1.24551033534962 1.18082169671465
 0.0928341710725898 0.599493733703596 -2.0505953640051 '.'
 -1.08649031284551 -0.865456519909477 '.' 2.75557960790302
 0.881143579184346 0.674471945471649 -1.44878648893363 -3.72411383897722
 -1.38131789177637 '.' '.' 5.41905620095129 '.' -0.342636515952079
 -0.111669494459405 -0.816993645198656 0.18239534186363 -0.214997258794035
 0.517811238015827 '.' '.' '.' '.' '.' 2.50372489686823 '.'
 0.0974901129923348 -2.04902349969142 '.' -2.99791740003004
 -1.41925515956187 2.34696639804313 '.' -1.8079483903393 3.32151835531883
 '.' '.' '.' 4.10111380803453 -0.733522379663636 2.12628699887071 '.' '.'
 '.' -0.615839346409602 0.620681882628763 1.98938453238048
 0.185259378880778 1.10884704568458 '.' '.' 4.02698047878354
 0.303907421223287 '.' 0.853955018782722 '.' -1.9222533414192 '.' '.'
 -0.987321027475765 '.' -1.42113131036961 '.' -3.42040819381878
 1.21754776737995 '.' -0.527819209746206 -1.79889045378054
 -1.44235869751468 -5.33339017829433 '.' 1.8176765127262 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 1.6951286981971 1.6951286981971 -0.0274451648003615 -0.0274451648003615
 1.83366808117122 '.' '.' '.' 0.322004765294048 '.' 0.9911283716698
 -0.512733755306802 -0.398837217747125 '.' '.' 1.83366808117122 '.'
 -0.982727799381157 -0.982727799381157 '.' '.' '.' '.' -1.15018109964609
 -1.15018109964609 '.' '.' 4.23220859072885 0.681275321847818
 1.4396607305099 '.' 4.05717005254254 1.74981493260157 0.554223709974506
 1.2288879277127 0.953055172354045 1.71697083676563 '.' 3.33806479625907
 '.' '.' 0.473373375061211 1.92914089110849 0.933080799622852 '.' '.'
 -0.0129976080826519 '.' 2.85746490313868 3.27930650064444 '.'
 -0.303087706786894 1.53581142075512 2.45305749434808 2.53365459317235 '.'
 4.23220859072885 '.' 2.19863945242443 '.' '.' '.' '.' -3.97736276921453
 '.' '.' 1.8677219993927 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' 0.008093353918723 1.6332400949348
 2.19863945242443 0.903069021299127 '.' 0.758429673080804 2.19863945242443
 '.' '.' '.' '.' -3.97736276921453 '.' '.' 1.8677219993927 '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.008093353918723
 1.6332400949348 2.19863945242443 0.903069021299127 '.' 0.758429673080804
 2.48184869967673 2.09183372030708 '.' '.' 2.48184869967673
 1.96019845356841 -0.857804306808559 1.58912949219012 1.58912949219012
 9.03470791370173 5.44441583895939 4.55717824142058 6.67845368195785 '.'
 0.293719819544616 2.17074250392365 9.03470791370173 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 101954269.0 '.' 10878.0 3078.0 '.' 127069.0 '.' 9721.0 5540.0
 643650.0 728643.0 728113.0 100132929.0 653259.0 439965.0 100996567.0 '.'
 582.0 254359.0 '.' 283417.0 '.' 283417.0 '.' 105370401.0 '.' 399671.0
 641371.0 '.' '.' 646096.0 283755.0 727832.0 729786.0 606.0 100422949.0
 100287399.0 100847060.0 348120.0 654499.0 '.' 646243.0 100996331.0
 440225.0 727924.0 101927079.0 390538.0 283694.0 390539.0 388077.0
 646370.0 100302233.0 646396.0 100616223.0 100132979.0 283767.0 '.'
 283755.0 727832.0 729786.0 606.0 100422949.0 100287399.0 100847060.0
 348120.0 654499.0 '.' 646243.0 100996331.0 440225.0 727924.0 101927079.0
 390538.0 283694.0 '.' '.' 9742.0 '.' '.' 100289574.0 729264.0 '.' '.'
 24150.0 386757.0 653550.0 '.' 729355.0 '.' '.' 113218496.0 102724928.0
 606551.0 '.' '.' 283914.0 '.' '.' 24150.0 386757.0 653550.0 '.' 729355.0
 '.' '.' '.' 113218496.0 102724928.0 '.' 283914.0 '.' 1352.0 146822.0
 9953.0 '.' 94150.0 '.' 94151.0 5376.0 100616125.0 64518.0 284040.0
 100533496.0 94145.0 201158.0 '.' 414059.0 414062.0 9560.0 101060389.0
 6349.0 729877.0 84218.0 '.' 284058.0 644246.0 '.' 101927289.0 101927289.0
 '.' 105373979.0 '.' 8214.0 5625.0 '.' 26220.0 117134596.0 9993.0 25786.0
 8220.0 23617.0 2928.0 100652736.0 6576.0 8218.0 7290.0 64976.0 128977.0
 105372860.0 7353.0 8318.0 7122.0 150185.0 5413.0 '.' 2812.0 6899.0
 54584.0 79680.0 10587.0 1312.0 100616414.0 421.0 128989.0 406961.0
 54487.0 100500860.0 100302197.0 27037.0 102465490.0 5902.0 109617010.0
 29801.0 388849.0 284865.0 150197.0 65078.0 100302118.0 85359.0 653203.0
 '.' 728226.0 728229.0 728233.0 85376.0 117134597.0 729461.0 101927859.0
 7625.0 91179.0 84861.0 51586.0 '.' 84222.0 5297.0 3053.0 9342.0 1399.0
 101928891.0 150209.0 8216.0 80764.0 439931.0 113691.0 9127.0 6545.0
 693234.0 440799.0 400891.0 400892.0 '.' 285401.0 132204.0 '.' 132203.0
 100130345.0 132200.0 80145.0 '.' 6314.0 100861563.0 100507062.0 9861.0
 '.' 100652759.0 100287879.0 166336.0 '.' '.' 101929316.0 56999.0
 101929335.0 100507098.0 102724763.0 '.' 84100.0 '.' 440993.0 693155.0
 200958.0 '.' 152687.0 255403.0 642280.0 654254.0 7700.0 693156.0 79963.0
 170960.0 54872.0 112441426.0 '.' 5158.0 101928521.0 521.0 4636.0 84179.0
 10336.0 100129917.0 10815.0 2580.0 84286.0 1609.0 10861.0 3425.0 53834.0
 285498.0 '.' '.' 10417.0 '.' 285463.0 1487.0 92070.0 10296.0 57654.0
 54729.0 152877.0 7884.0 92305.0 10460.0 2261.0 3954.0 7468.0 677770.0
 7469.0 100126332.0 401115.0 339983.0 353497.0 79441.0 10608.0 100616358.0
 57732.0 402160.0 6047.0 8603.0 79155.0 6452.0 118.0 10227.0 317648.0
 8602.0 2868.0 100750326.0 3064.0 345222.0 6002.0 3083.0 285489.0 4043.0
 285492.0 100133461.0 152.0 348926.0 133060.0 85013.0 55646.0 166793.0
 27065.0 53407.0 '.' 100507266.0 109623454.0 '.' '.' 4487.0 '.' 54360.0
 55351.0 10141.0 132884.0 2121.0 1400.0 100616201.0 389197.0 152789.0 '.'
 285484.0 7466.0 5522.0 23324.0 93621.0 105374366.0 93622.0 339988.0
 6286.0 114932.0 55330.0 9778.0 57533.0 '.' 257236.0 93624.0 80273.0
 730971.0 57537.0 100616471.0 768239.0 100422826.0 84740.0 60312.0 '.'
 84448.0 407052.0 54436.0 94031.0 105374374.0 8310.0 152992.0 27201.0
 8532.0 '.' 3166.0 100287045.0 100287144.0 100287178.0 100287205.0
 100287238.0 100288520.0 100287327.0 100287364.0 100287404.0 100287441.0
 100287478.0 100287513.0 728369.0 728373.0 728379.0 728386.0 728393.0
 728400.0 728405.0 391627.0 728419.0 391622.0 '.' 7367.0 '.' 653082.0 '.'
 '.' 100500825.0 101929495.0 1070.0 '.' 153364.0 10622.0 116068.0 84059.0
 100505994.0 57561.0 100129716.0 '.' 56940.0 '.' 3136.0 80868.0 '.' '.'
 27241.0 '.' '.' '.' 135892.0 8468.0 8326.0 9031.0 9275.0 26608.0 51085.0
 155382.0 84277.0 114049.0 6804.0 100422948.0 171022.0 83451.0 1365.0
 1364.0 155368.0 135886.0 2006.0 107986809.0 3984.0 7458.0 693175.0 7462.0
 5982.0 7461.0 9569.0 113218504.0 2969.0 101926943.0 '.' 100128890.0
 641517.0 401447.0 645402.0 100131980.0 100289462.0 55894.0 10407.0
 503618.0 503841.0 504180.0 503614.0 100131608.0 441317.0 645558.0
 645572.0 645651.0 441326.0 441323.0 441324.0 728746.0 728753.0 441327.0
 441328.0 100133251.0 245910.0 245908.0 245909.0 140596.0 653423.0
 414325.0 1673.0 '.' 100128890.0 641517.0 401447.0 645402.0 100131980.0
 100289462.0 55894.0 10407.0 503618.0 503841.0 504180.0 503614.0
 100131608.0 441317.0 645558.0 645572.0 645651.0 441326.0 441323.0
 441324.0 728746.0 728753.0 441327.0 441328.0 100133251.0 245910.0
 245908.0 245909.0 140596.0 653423.0 414325.0 1673.0 '.' 6224.0 26795.0
 105375847.0 4342.0 5324.0 79145.0 '.' 83696.0 '.' 8242.0 23096.0 8243.0
 102465516.0 158787.0 3028.0 10075.0 407054.0 406889.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 8.0 8.0 8.0 9.0 9.0 8.0 8.0 8.0 '.' '.' 9.0 '.' '.' '.' '.' 5.0
 5.0 7.0 4.0 4.0 4.0 4.0 '.' '.' 6.0 6.0 8.0 '.' 8.0 '.' '.' 8.0 '.' '.'
 '.' 8.0 '.' '.' '.' '.' '.' 9.0 '.' '.' '.' 9.0 9.0 '.' '.' '.' '.' '.'
 '.' '.' 8.0 8.0 '.' 8.0 '.' '.' '.' 8.0 '.' '.' '.' '.' '.' 9.0 '.' '.'
 '.' 9.0 9.0 '.' 4.0 4.0 9.0 '.' '.' 9.0 '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' 1.0 3.0 9.0 4.0 '.' '.' '.' '.' 1.0 '.' 7.0 9.0 7.0 '.' 7.0
 7.0 7.0 9.0 9.0 '.' 9.0 '.' 9.0 0.0 0.0 '.' '.' '.' '.' '.' '.' 0.0 9.0
 6.0 '.' '.' '.' 4.0 '.' '.' 6.0 9.0 '.' 3.0 5.0 0.0 4.0 9.0 '.' '.' 3.0
 1.0 '.' '.' '.' 7.0 2.0 5.0 '.' 5.0 8.0 '.' 4.0 4.0 '.' 0.0 '.' '.' 5.0
 '.' 2.0 '.' 1.0 '.' '.' '.' 1.0 '.' 7.0 7.0 '.' '.' '.' '.' 7.0 '.' '.'
 '.' 4.0 0.0 2.0 0.0 '.' '.' 2.0 8.0 4.0 3.0 '.' 5.0 9.0 4.0 '.' '.' 6.0
 6.0 '.' '.' '.' '.' 0.0 '.' 4.0 '.' 9.0 '.' 7.0 4.0 '.' 1.0 '.' '.' 0.0
 '.' '.' '.' 1.0 '.' '.' '.' 1.0 '.' '.' '.' 5.0 5.0 6.0 '.' '.' 6.0 0.0
 6.0 '.' '.' 7.0 7.0 '.' '.' 9.0 5.0 '.' '.' 6.0 '.' '.' 9.0 '.' 1.0 '.'
 2.0 1.0 6.0 3.0 8.0 6.0 3.0 4.0 '.' '.' 9.0 '.' '.' 1.0 '.' 2.0 7.0 3.0
 6.0 4.0 8.0 3.0 3.0 3.0 '.' '.' 2.0 '.' '.' 2.0 7.0 6.0 2.0 '.' 2.0 '.'
 2.0 0.0 3.0 6.0 1.0 7.0 '.' 2.0 6.0 '.' 0.0 2.0 3.0 4.0 5.0 6.0 8.0 '.'
 3.0 '.' 9.0 8.0 5.0 4.0 7.0 5.0 '.' '.' '.' '.' '.' 5.0 '.' 9.0 5.0 '.'
 5.0 5.0 1.0 '.' 7.0 0.0 '.' '.' 9.0 1.0 5.0 6.0 '.' '.' '.' 9.0 8.0 9.0
 0.0 2.0 '.' '.' 2.0 4.0 '.' 2.0 '.' '.' '.' '.' 3.0 '.' 2.0 '.' 7.0 6.0
 '.' 5.0 7.0 9.0 9.0 '.' 3.0 9.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 5.0 5.0 8.0 8.0 1.0 '.' '.'
 '.' 7.0 '.' 7.0 8.0 3.0 '.' '.' 1.0 '.' 5.0 5.0 '.' '.' '.' '.' 4.0 4.0
 '.' '.' 0.0 7.0 5.0 4.0 0.0 3.0 4.0 2.0 1.0 7.0 '.' 1.0 '.' '.' 5.0 4.0
 9.0 '.' '.' 4.0 '.' 0.0 2.0 '.' 4.0 5.0 0.0 1.0 '.' 1.0 '.' 8.0 '.' '.'
 '.' '.' 9.0 9.0 '.' 9.0 9.0 9.0 9.0 '.' 8.0 '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' 9.0 8.0 9.0 9.0 9.0 '.' 9.0 8.0 '.' '.' '.' '.' 9.0
 9.0 '.' 9.0 9.0 9.0 9.0 '.' 8.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' 9.0 8.0 9.0 9.0 9.0 '.' 9.0 0.0 5.0 '.' '.' 3.0 0.0 6.0 3.0 3.0
 0.0 0.0 0.0 0.0 '.' 1.0 1.0 0.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 2.6297e-08 1.72e-11 2.6297e-08 0.00065559 0.00065559 0.33439
 3.8557e-06 8.2144e-07 '.' '.' 0.33439 '.' '.' '.' '.' 0.0004208
 3.4063e-12 0.0004208 1.0936e-13 1.0936e-13 1.0936e-13 1.0936e-13 '.' '.'
 6.4141e-05 1.3711e-29 6.4141e-05 '.' 0.35277 '.' '.'
 2.2875000000000003e-19 '.' '.' '.' 0.042457 '.' '.' '.' '.' '.' 0.35277
 '.' '.' '.' 3.9447e-08 5.1332e-05 '.' '.' '.' '.' '.' '.' '.' 2.3586e-12
 0.35277 '.' 2.2875000000000003e-19 '.' '.' '.' 0.042457 '.' '.' '.' '.'
 '.' 0.35277 '.' '.' '.' 3.9447e-08 5.1332e-05 '.' 9.914e-24 9.914e-24
 0.0075995 '.' '.' 0.0075995 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 0.90958 0.08405 1.282e-06 0.29349 '.' '.' '.' '.' 0.90958 '.' 1.9845e-17
 0.095789 8.7378e-07 '.' 2.3189e-05 0.31517 0.21949 0.31517 0.088586 '.'
 0.12057 '.' 1.3666e-05 0.99972 0.99972 '.' '.' '.' '.' '.' '.' 1.0
 9.8176e-12 5.3577e-12 '.' '.' '.' 5.1573e-06 '.' '.' 0.003861 0.0044347
 '.' 0.058829 2.5101e-37 1.0 0.052924 1.9976e-05 '.' '.' 4.6237e-05
 0.89512 '.' '.' '.' 0.51249 0.83661 4.7419e-05 '.' 3.4688e-11 1.1377e-06
 '.' 5.0422e-11 0.00014769 '.' 0.99973 '.' '.' 1.0841e-08 '.' 0.82235 '.'
 0.85288 '.' '.' '.' 0.95882 '.' 5.0636e-05 0.48065 '.' '.' '.' '.'
 9.0005e-09 '.' '.' '.' 1.5586e-06 0.9998 0.42419 0.99974 '.' '.'
 3.1234e-12 2.5137e-10 0.013567 0.44604 '.' 1.9474e-14
 1.0210999999999999e-92 0.013291 '.' '.' 4.468e-09 2.8317e-07 '.' '.' '.'
 '.' 0.99544 '.' 0.0041913 '.' 0.00010257 '.' 4.0628e-08 0.0060818 '.'
 0.9595 '.' '.' 0.99518 '.' '.' '.' 0.99544 '.' '.' '.' 1.0004e-06 '.' '.'
 '.' 0.01013 0.01013 0.0047211 '.' '.' 0.0047211 1.0 0.3055 '.' '.'
 0.098159 0.10393 '.' '.' 0.094789 5.4258e-15 '.' '.' 2.6155e-27 '.' '.'
 8.4023e-14 '.' 0.95326 '.' 0.82499 0.0051818 3.0549e-09 1.7603e-09
 1.0564e-11 3.7599e-13 0.011908 0.0015645 '.' '.' 2.6609e-15 '.' '.'
 0.98442 '.' 0.22741 5.4127e-25 0.71465 0.0035705 0.068148 2.3074e-11
 2.7082e-07 1.6432e-05 1.2141e-06 '.' '.' 0.13469 '.' '.' 0.86458
 9.488e-41 1.2992e-09 0.77635 '.' 0.07234 '.' 0.79973 0.99993 0.0015926
 1.156e-11 0.9883 7.3331e-11 '.' 2.1363e-06 1.6286e-15 '.' 1.0 0.80456
 4.0922e-09 1.9843e-08 0.00010263 4.4951e-07 0.45772 '.' 0.50159 '.'
 4.8437e-24 0.00019994 3.758e-07 1.3752e-08 0.0088286 2.4881e-07 '.' '.'
 '.' '.' '.' 0.16517 '.' 1.0733e-05 4.9116e-08 '.' 1.0207e-34
 3.4620000000000003e-25 0.99173 '.' 7.736100000000001e-19 0.99986 '.' '.'
 1.6230999999999999e-38 0.89954 6.557e-23 0.31404 '.' '.' '.' 0.033257
 0.0025481 0.10151 0.99999 0.039267 '.' '.' 0.72366 0.13916 '.' 0.0031696
 '.' '.' '.' '.' 2.3828e-07 '.' 0.0045858 '.' 6.0939e-35 6.5843e-08 '.'
 7.6016e-16 2.0315e-22 2.6834e-06 8.8063e-36 '.' 0.72623 0.28656 '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' 9.6905e-08 9.6905e-08 3.6787e-13 3.6787e-13 0.98715 '.' '.' '.'
 0.00010528 '.' 4.5418e-05 1.7611e-10 0.30382 '.' '.' 0.98715 '.'
 0.0093421 0.0093421 '.' '.' '.' '.' 4.2117e-17 4.2117e-17 '.' '.' 1.0
 1.5479e-10 1.3955e-06 0.0019309 1.0 0.18519 0.00018452 0.047771 0.91622
 0.023092 '.' 0.9785 '.' '.' 0.0029581 0.52233 6.9789e-05 '.' '.'
 2.1429e-14 '.' 0.99937 0.43982 '.' 0.00022295 2.2054e-06 0.99997 0.90039
 '.' 0.99592 '.' 0.4218 '.' '.' '.' '.' 1.6471e-08 0.067977 '.' 0.027751
 0.33176 0.081151 0.29184 '.' 0.4218 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' 0.32633 0.37719 0.0085821 0.093748 6.9645e-05 '.' 0.0011637
 0.4218 '.' '.' '.' '.' 1.6471e-08 0.067977 '.' 0.027751 0.33176 0.081151
 0.29184 '.' 0.4218 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 0.32633 0.37719 0.0085821 0.093748 6.9645e-05 '.' 0.0011637 0.99532
 0.020686 '.' '.' 0.58928 0.99532 0.034885 2.2898e-14 2.2898e-14 1.0 1.0
 0.99998 1.0 '.' 0.983 0.93604 1.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 0.00090932 1.219e-05 0.00090932 0.00015575 0.00015575 0.00029629
 0.00029629 6.116e-09 '.' '.' '.' '.' '.' '.' '.' 0.0061403 1.7787e-07
 0.0061403 7.0294e-05 7.0294e-05 7.0294e-05 7.0294e-05 '.' '.' 0.035999
 6.2323e-17 0.035999 '.' 0.57189 '.' '.' 0.086864 '.' '.' '.' 0.57189 '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.018051 '.' '.' '.' '.' '.' '.' '.'
 '.' 0.57189 '.' 0.086864 '.' '.' '.' 0.57189 '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' 0.018051 '.' 9.1377e-18 9.1377e-18 0.64106 '.' '.' 0.64106
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.83315 0.64657 0.0075064
 0.085455 '.' '.' '.' '.' 0.83315 '.' 3.1995e-14 0.24429 0.0023623 '.'
 0.00013674 0.63692 0.63692 '.' 0.48994 '.' '.' '.' 0.62038 0.99973
 0.99973 '.' '.' '.' '.' '.' '.' 1.0 7.621e-07 4.7536e-06 '.' '.' '.'
 0.0010959 '.' '.' 0.0041565 0.037186 '.' 0.63354 1.2408e-26 1.0 0.020082
 3.69e-07 '.' '.' 0.069104 0.74052 '.' '.' '.' 0.10112 0.9834 0.0012635
 '.' 1.0692e-08 0.00084666 '.' 8.2184e-07 4.2224e-06 '.' 0.9999 '.' '.'
 1.3059e-05 '.' 0.33622 '.' 0.98899 '.' '.' '.' 0.52644 '.' 0.12857 '.'
 '.' '.' '.' '.' '.' '.' '.' '.' 0.00035588 '.' 0.70261 0.96081 '.' '.'
 0.00080407 2.7955e-05 0.15166 0.16345 '.' 1.9583e-10 3.3832e-52 0.029328
 '.' '.' 1.8785e-07 0.00010047 '.' '.' '.' '.' 0.98784 '.' 0.17171 '.'
 0.0027379 '.' '.' 0.97832 '.' 0.92856 '.' '.' 0.96209 '.' '.' '.' 0.98784
 '.' '.' '.' 4.2266e-07 '.' '.' '.' 0.0042709 0.0042709 '.' '.' '.' '.'
 1.0 1.7753e-05 '.' '.' 1.3118e-09 0.16189 '.' '.' 5.9729e-11 8.7751e-07
 '.' '.' 1.6257e-13 '.' '.' 4.4299e-08 '.' 0.9434 '.' 0.79579 0.97313
 0.00043963 0.001194 4.013e-06 2.6418e-08 0.58219 0.12523 '.' '.'
 1.0881e-06 '.' '.' 0.97976 '.' 0.84486 8.8875e-14 0.18842 3.007e-05
 0.51566 1.5746e-06 0.091952 0.0029091 0.081055 '.' '.' 0.16689 '.' '.'
 0.32468 2.9965999999999997e-32 8.8992e-07 0.89694 '.' 0.88846 '.' 0.62895
 0.99782 2.9733e-06 0.0031019 0.6113 3.0178e-07 '.' 0.017449 5.6904e-07
 '.' 1.0 0.32217 0.00056037 5.2082e-07 0.0048084 0.0060843 '.' '.' 0.64595
 '.' 7.3147e-16 0.11006 0.00013245 0.0091642 0.0045383 1.1678e-06 '.' '.'
 '.' '.' '.' 0.27536 '.' 0.00065277 0.0043235 '.' 1.0532999999999999e-21
 8.015e-08 0.95327 '.' 6.3423e-10 0.99317 '.' '.' '.' 0.56445 4.3573e-18
 0.17706 '.' '.' '.' 0.048649 0.008908 0.15897 0.99472 0.909 '.' '.'
 0.34506 0.89627 '.' 0.0026463 '.' 3.335e-11 '.' '.' 0.37607 '.' 0.76242
 '.' 1.082e-27 1.7199e-05 '.' 3.0316e-12 1.4776e-13 1.2826e-05
 4.5079999999999994e-21 '.' 0.12528 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.010256 0.010256
 0.043228 0.043228 0.97875 '.' '.' '.' 0.011321 '.' 0.0002801 6.4276e-05
 0.77182 '.' '.' 0.97875 '.' 0.0043071 0.0043071 '.' '.' '.' '.'
 6.3752e-10 6.3752e-10 '.' '.' 1.0 2.7256e-06 0.1306 '.' 1.0 0.70664
 0.0043765 0.67682 0.65635 0.0047983 '.' 0.91048 '.' '.' 9.0329e-06
 0.67854 0.00013716 '.' '.' 1.52e-05 '.' 0.9909 0.92254 '.' 0.00069106
 4.0421e-05 0.99988 0.99643 '.' 0.99935 '.' 0.51947 '.' '.' '.' '.'
 4.2486e-09 '.' '.' 0.047238 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' 0.43625 0.40931 0.51947 0.039012 '.' 0.39981
 0.51947 '.' '.' '.' '.' 4.2486e-09 '.' '.' 0.047238 '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.43625 0.40931
 0.51947 0.039012 '.' 0.39981 0.82992 0.68632 '.' '.' 0.14931 0.82992
 0.38798 5.7604e-06 5.7604e-06 1.0 0.99784 0.97539 0.99999 '.' 0.96626
 0.88687 1.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[-1.0 '.' 1.0 '.' '.' -1.0 '.' -1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 0.9 '.' '.' 1.0 '.' 0.0 '.' -1.0 '.' -1.0 '.' '.' -1.6 -1.0 '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' -1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' -1.0 1.0 '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' -1.0 '.' '.' '.' '.' '.' '.' '.' 0.0
 '.' '.' '.' -1.0 '.' 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' -1.0 '.' '.' '.' '.' '.' '.' '.' -1.0 '.' '.' -1.0 '.' '.' '.'
 '.' 1.9 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' -1.0 '.'
 '.' '.' 1.9 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' -1.0 '.' 0.0 '.'
 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' -1.0 '.' 1.0 '.' '.'
 -1.6 0.9 '.' 0.0 '.' 1.45 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 -0.55 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' -1.0 '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'
 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' '.' '.' '.' '.'
 '.' -1.0 '.' 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:60: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'
 'NA' 'NA' 'NA' 'NA']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, sample_col] = df.loc[:, sample_col].fillna("NA")
2026-04-14 12:03:36 [INFO] variantconvert finished.


================================================
FILE: share/doc/AnnotSV/Example/test1.annotated.vcf
================================================
##fileformat=VCFv4.2
##fileDate=14/04/2026
##inputFile=/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test1.annotated.tsv
##source=variantconvert from AnnotSV
##variantconvertVersion=2.0.1
##variantconvertMode=combined
##FILTER=<ID=PASS,Description="Passed filter">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=DEL,Description="Deletion">
##INFO=<ID=AnnotSV_ID,Number=1,Type=String,Description="AnnotSV ID">
##INFO=<ID=SV_chrom,Number=1,Type=String,Description="Name of the chromosome">
##INFO=<ID=SV_start,Number=1,Type=Integer,Description="Starting position of the SV in the chromosome">
##INFO=<ID=END,Number=1,Type=Integer,Description="Ending position of the SV in the chromosome">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Length of the SV (bp) (deletions have negative values)">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of the SV (DEL, DUP, ...)">
##INFO=<ID=Samples_ID,Number=1,Type=String,Description="List of the samples ID for which the SV was called (according to the SV input file)">
##INFO=<ID=REF,Number=1,Type=String,Description="Nucleotide sequence in the reference genome (extracted only from a VCF input file)">
##INFO=<ID=ALT,Number=1,Type=String,Description="Alternate nucleotide sequence (extracted only from a VCF input file)">
##INFO=<ID='SampleID',Number=1,Type=String,Description="The sample ID column from a VCF file">
##INFO=<ID=Annotation_mode,Number=1,Type=String,Description="Indicate the type of annotation lines generated: annotation on the SV full length ('full'), annotation on each gene overlapped by the SV ('split')">
##INFO=<ID=Gene_name,Number=.,Type=String,Description="Gene symbol">
##INFO=<ID=Gene_count,Number=1,Type=Integer,Description="Number of overlapped genes with the SV">
##INFO=<ID=Tx,Number=1,Type=String,Description="Transcript symbol">
##INFO=<ID=Tx_start,Number=1,Type=Integer,Description="Starting position of the transcript">
##INFO=<ID=Tx_end,Number=1,Type=Integer,Description="Ending position of the transcript">
##INFO=<ID=Overlapped_tx_length,Number=1,Type=Integer,Description="Length of the transcript (bp) overlapping with the SV">
##INFO=<ID=Overlapped_CDS_length,Number=1,Type=Integer,Description="Length of the CoDing Sequence (CDS) (bp) overlapped with the SV">
##INFO=<ID=Overlapped_CDS_percent,Number=1,Type=Integer,Description="Percent of the CoDing Sequence (CDS) (bp) overlapped with the SV">
##INFO=<ID=Frameshift,Number=1,Type=String,Description="Indicates if the CDS length is not divisible by three (yes or no)">
##INFO=<ID=Exon_count,Number=1,Type=Integer,Description="Number of exons of the transcript">
##INFO=<ID=Location,Number=1,Type=String,Description="SV location in the gene's. Values: txStart, txEnd, exon'i', intron'i' e.g. txStart-exon3">
##INFO=<ID=Location2,Number=1,Type=String,Description="SV location in the gene's coding regions. Values: UTR (no CDS in the gene), 5'UTR (before the CDS start), 3'UTR (after the CDS end), CDS (between the CDS start and the CDS end, can be in an exon or an intron). e.g. 3'UTR-CDS">
##INFO=<ID=Dist_nearest_SS,Number=1,Type=Integer,Description="Absolute distance to nearest splice site after considering exonic and intronic SV breakpoints">
##INFO=<ID=Nearest_SS_type,Number=1,Type=String,Description="Nearest splice site type: 5' (donor) or 3' (acceptor)">
##INFO=<ID=Intersect_start,Number=1,Type=Integer,Description="Start position of the intersection between the SV and a transcript">
##INFO=<ID=Intersect_end,Number=1,Type=Integer,Description="End position of the intersection between the SV and a transcript">
##INFO=<ID=RE_gene,Number=1,Type=String,Description="Name of the genes regulated by a regulatory element overlapped with the SV to annotate. When available, the regulated gene name is detailed with associated haploinsufficiency (HI), triplosensitivity (TS), Exomiser (EX) scores, OMIM and candidate genes. (For the filtering output, see the -REselect1 and -REselect2 options)">
##INFO=<ID=B_gain_source,Number=1,Type=String,Description="Origin of the benign gain genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), ClinGen (TS40), DGV (dgv, nsv or esv), DDD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)">
##INFO=<ID=B_gain_coord,Number=1,Type=String,Description="Coordinates of the benign gain genomic regions completely overlapping the SV to annotate">
##INFO=<ID=B_gain_AFmax,Number=1,Type=Float,Description="Maximum allele frequency of the reported benign gain genomic regions (if available)">
##INFO=<ID=B_loss_source,Number=1,Type=String,Description="Origin of the benign loss genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), ClinGen (HI40), DGV (dgv, nsv or esv), DDD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)">
##INFO=<ID=B_loss_coord,Number=1,Type=String,Description="Coordinates of the benign loss genomic regions completely overlapping the SV to annotate">
##INFO=<ID=B_loss_AFmax,Number=1,Type=Float,Description="Maximum allele frequency of the reported benign loss genomic regions (if available)">
##INFO=<ID=B_ins_source,Number=1,Type=String,Description="Origin of the benign insertion genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)">
##INFO=<ID=B_ins_coord,Number=1,Type=String,Description="Coordinates of the benign insertion genomic regions completely overlapping the SV to annotate">
##INFO=<ID=B_ins_AFmax,Number=1,Type=Float,Description="Maximum allele frequency of the reported benign insertion genomic regions (if available)">
##INFO=<ID=B_inv_source,Number=1,Type=String,Description="Origin of the benign inversion genomic regions completely overlapping the SV to annotate: gnomAD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)">
##INFO=<ID=B_inv_coord,Number=1,Type=String,Description="Coordinates of the benign inversion genomic regions completely overlapping the SV to annotate">
##INFO=<ID=B_inv_AFmax,Number=1,Type=Float,Description="Maximum allele frequency of the reported benign inversion genomic regions (if available)">
##INFO=<ID=P_gain_phen,Number=1,Type=String,Description="Phenotype of the pathogenic gain genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_gain_hpo,Number=1,Type=String,Description="HPO terms describing the pathogenic gain genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_gain_source,Number=1,Type=String,Description="Origin of the pathogenic gain genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN), ClinGen (TS3)">
##INFO=<ID=P_gain_coord,Number=1,Type=String,Description="Coordinates of the pathogenic gain genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_loss_phen,Number=1,Type=String,Description="Phenotype of the pathogenic loss genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_loss_hpo,Number=1,Type=String,Description="HPO terms describing the pathogenic loss genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_loss_source,Number=1,Type=String,Description="Origin of the pathogenic loss genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN), ClinGen (HI3), morbid">
##INFO=<ID=P_loss_coord,Number=1,Type=String,Description="Coordinates of the pathogenic loss genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_ins_phen,Number=1,Type=String,Description="Phenotype of the pathogenic insertion genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_ins_hpo,Number=1,Type=String,Description="HPO terms describing the pathogenic insertion genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_ins_source,Number=1,Type=String,Description="Origin of the pathogenic insertion genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN)">
##INFO=<ID=P_ins_coord,Number=1,Type=String,Description="Coordinates of the pathogenic insertion genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_snvindel_nb,Number=1,Type=Integer,Description="Number of pathogenic snv/indel from public databases completely overlapped with the SV to annotate">
##INFO=<ID=P_snvindel_phen,Number=1,Type=String,Description="Phenotypes of pathogenic snv/indel from public databases completely overlapped with the SV to annotate">
##INFO=<ID=TAD_coordinate,Number=1,Type=String,Description="Coordinates of the TAD whose boundaries overlapped with the annotated SV (boundaries included in the coordinates)">
##INFO=<ID=ENCODE_experiment,Number=1,Type=String,Description="ENCODE experiments used to define the TAD">
##INFO=<ID=Cosmic_ID,Number=1,Type=String,Description="COSMIC identifier">
##INFO=<ID=Cosmic_mut_typ,Number=1,Type=String,Description="Defined as Gain or Loss">
##INFO=<ID=CytoBand,Number=1,Type=String,Description="Cytogenic band annotation">
##INFO=<ID=GC_content_left,Number=1,Type=Float,Description="GC content around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=GC_content_right,Number=1,Type=Float,Description="GC content around the right SV breakpoint (+/- 100bp)">
##INFO=<ID=Repeat_coord_left,Number=1,Type=String,Description="Repeats coordinates around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=Repeat_type_left,Number=1,Type=String,Description="Repeats type around the left SV breakpoint (+/- 100bp) e.g. AluSp, L2b, L1PA2, LTR12C, SVA_D, ...">
##INFO=<ID=Repeat_coord_right,Number=1,Type=String,Description="Repeats coordinates around the right SV breakpoint (+/- 100bp)">
##INFO=<ID=Repeat_type_right,Number=1,Type=String,Description="Repeats type around the right SV breakpoint (+/- 100bp) e.g. AluSp, L2b, L1PA2, LTR12C, SVA_D, ...">
##INFO=<ID=Gap_left,Number=1,Type=String,Description="Gap regions coordinates around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=Gap_right,Number=1,Type=String,Description="Gap regions coordinates around the right SV breakpoint (+/-100bp)">
##INFO=<ID=SegDup_left,Number=1,Type=String,Description="Segmental Duplication regions coordinates around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=SegDup_right,Number=1,Type=String,Description="Segmental Duplication regions coordinates around the right SV breakpoint (+/- 100bp)">
##INFO=<ID=ENCODE_blacklist_left,Number=1,Type=String,Description="ENCODE blacklist regions coordinates around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=ENCODE_blacklist_characteristics_left,Number=1,Type=String,Description="ENCODE blacklist regions characteristics around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=ENCODE_blacklist_right,Number=1,Type=String,Description="ENCODE blacklist regions coordinates around the right SV breakpoint (+/- 100bp)">
##INFO=<ID=ENCODE_blacklist_characteristics_right,Number=1,Type=String,Description="ENCODE blacklist regions characteristics around the right SV breakpoint (+/- 100bp)">
##INFO=<ID=ACMG,Number=1,Type=String,Description="ACMG genes">
##INFO=<ID=HI,Number=1,Type=Integer,Description="ClinGen Haploinsufficiency Score">
##INFO=<ID=TS,Number=1,Type=Float,Description="ClinGen Triplosensitivity Score">
##INFO=<ID=DDD_HI_percent,Number=1,Type=Float,Description="Haploinsufficiency ranks from DDD">
##INFO=<ID=GenCC_disease,Number=1,Type=String,Description="GenCC disease name: e.g. Nizon-Isidor syndrome">
##INFO=<ID=GenCC_moi,Number=1,Type=String,Description="GenCC mode of inheritance">
##INFO=<ID=GenCC_classification,Number=1,Type=String,Description="GenCC classification (Definitive, Strong, Moderate, Limited, Disputed, Animal Model Only, Refuted or No known disease relationship)">
##INFO=<ID=GenCC_pmid,Number=1,Type=String,Description="GenCC Pubmed Id">
##INFO=<ID=DDD_status,Number=1,Type=String,Description="DDD status: e.g. confirmed, probable">
##INFO=<ID=DDD_mode,Number=1,Type=String,Description="DDD allelic requirement: e.g. biallelic, hemizygous...">
##INFO=<ID=DDD_consequence,Number=1,Type=String,Description="DDD mutation consequence: e.g. 'loss of function', uncertain ...">
##INFO=<ID=DDD_disease,Number=1,Type=String,Description="DDD disease name: e.g. 'OCULOAURICULAR SYNDROME'">
##INFO=<ID=DDD_pmid,Number=1,Type=String,Description="DDD Pubmed Id">
##INFO=<ID=ExAC_synZ,Number=1,Type=Float,Description="Positive synZ_ExAC (Z score) from ExAC indicate gene intolerance to synonymous variation">
##INFO=<ID=ExAC_misZ,Number=1,Type=Float,Description="Positive misZ_ExAC (Z score) from ExAC indicate gene intolerance to missense variation">
##INFO=<ID=ExAC_delZ,Number=1,Type=Float,Description="Positive delZ_ExAC (Z score) from ExAC indicate gene intolerance to deletion">
##INFO=<ID=ExAC_dupZ,Number=1,Type=Float,Description="Positive dupZ_ExAC (Z score) from ExAC indicate gene intolerance to duplication">
##INFO=<ID=ExAC_cnvZ,Number=1,Type=Float,Description="Positive cnvZ_ExAC (Z score) from ExAC indicate gene intolerance to CNV">
##INFO=<ID=OMIM_ID,Number=1,Type=String,Description="OMIM unique six-digit identifier">
##INFO=<ID=OMIM_phenotype,Number=1,Type=String,Description="e.g. Charcot-Marie-Tooth disease">
##INFO=<ID=OMIM_inheritance,Number=1,Type=String,Description="e.g. AD (= 'Autosomal dominant'). Detailed in AnnotSV's FAQ.">
##INFO=<ID=OMIM_morbid,Number=1,Type=String,Description="Set to 'yes' if the SV overlaps an OMIM morbid gene">
##INFO=<ID=OMIM_morbid_candidate,Number=1,Type=String,Description="Set to 'yes' if the SV overlaps an OMIM morbid gene candidate">
##INFO=<ID=LOEUF_bin,Number=1,Type=Integer,Description="Minimal 'decile bin of LOEUF' for given transcripts of a gene (lower values indicate more constrained). Values = integer [0-9]">
##INFO=<ID=GnomAD_pLI,Number=1,Type=Float,Description="Score computed by gnomAD indicating the probability that a gene is intolerant to a loss of function variation (Nonsense, splice acceptor/donor variants due to SNV/indel)">
##INFO=<ID=ExAC_pLI,Number=1,Type=Float,Description="Score computed by ExAC indicating the probability that a gene is intolerant to a loss of function variation (Nonsense, splice acceptor/donor variants due to SNV/indel). ExAC considers pLI>=0.9 as an extremely LoF intolerant gene">
##INFO=<ID=Exomiser_gene_pheno_score,Number=1,Type=Float,Description="Exomiser score for how close each overlapped gene is to the phenotype">
##INFO=<ID=Human_pheno_evidence,Number=1,Type=String,Description="Phenotypic evidence from Human model">
##INFO=<ID=Mouse_pheno_evidence,Number=1,Type=String,Description="Phenotypic evidence from Mouse model">
##INFO=<ID=Fish_pheno_evidence,Number=1,Type=String,Description="Phenotypic evidence from Fish model">
##INFO=<ID=Compound_htz(sample),Number=1,Type=String,Description="List of heterozygous SNV/indel (reported with 'chrom_position') presents in the gene overlapped by the annotated SV">
##INFO=<ID=Count_hom(sample),Number=1,Type=Integer,Description="Number of homozygous SNV/indel (extracted from VCF input file) in the individual 'sample' which are present: 1) in the deletion SV ('full' annotation) and 2) between intersectStart and intersectEnd ('split' annotation)">
##INFO=<ID=Count_htz(sample),Number=1,Type=Integer,Description="Number of heterozygous SNV/indel (extracted from VCF input file) in the individual 'sample' which are present: 1) in the SV ('full' annotation) and 2) between intersectStart and intersectEnd ('split' annotation)">
##INFO=<ID=Count_htz/allHom(sample),Number=1,Type=Float,Description="Ratio for QC filtering: #htz(sample)/#allHom(sample)">
##INFO=<ID=Count_htz/total(cohort),Number=1,Type=Float,Description="Ratio for QC filtering: #htz(sample)/#total(cohort)">
##INFO=<ID=Count_total(cohort),Number=1,Type=Integer,Description="Total count of SNV/indel called from all the samples of the cohort and present in the interval of the deletion">
##INFO=<ID=AnnotSV_ranking_score,Number=1,Type=Float,Description="SV ranking score following the 2019 joint consensus recommendation of ACMG and ClinGen. Scoring: pathogenic >= 0.99, likely pathogenic [0.90;0.98], variant of uncertain significance [0.89;-0.89], likely benign [-0.90;-0.98], benign <= -0.99.">
##INFO=<ID=AnnotSV_ranking_criteria,Number=1,Type=String,Description="Decision criteria explaining the AnnotSV ranking score">
##INFO=<ID=ACMG_class,Number=1,Type=String,Description="SV ranking class into 1 of 5: class 1 (benign), class 2 (likely benign), class 3 (variant of unknown significance), class 4 (likely pathogenic), class 5 (pathogenic)">
##INFO=<ID=Biologist_annotation,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=Biologist_ranking,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=Closest_left,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=Closest_right,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=Tx_version,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_gain_phen,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_gain_hpo,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_gain_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_gain_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_gain_percent,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_loss_phen,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_loss_hpo,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_loss_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_loss_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_loss_percent,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_gain_allG_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_gain_allG_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_gain_someG_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_gain_someG_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_loss_allG_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_loss_allG_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_loss_someG_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_loss_someG_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=NCBI_gene_ID,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=HGNC_gene_ID,Number=.,Type=String,Description="Imported from AnnotSV">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=RE,Number=1,Type=Integer,Description="Reads Expected: the number of expected reads under the probabilistic model (Decon)">
##FORMAT=<ID=RO,Number=1,Type=Integer,Description="Reads observed: the number of observed reads (Decon)">
##FORMAT=<ID=RR,Number=1,Type=Float,Description="Reads ratio: the ratio of observed to expected reads (Decon)">
##FORMAT=<ID=NC,Number=1,Type=Integer,Description="N.comp: the number of samples used as the reference set (Decon)">
##FORMAT=<ID=CO,Number=1,Type=Float,Description="Correlation: the maximum correlation between the test sample and any other sample in the full set of BAM files (Decon)">
##FORMAT=<ID=BF,Number=1,Type=Float,Description="Bayes factor associated with the call (Decon)">
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#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA
1	149041934	.	T	<DEL>	.	PASS	AnnotSV_ID=1_149041934_149209289_DEL_1;SV_start=149041934;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=q21.2;Gene_name=RNVU1-17;Closest_left=LSP1P5;Closest_right=RNVU1-18;Gene_count=1;Tx=.,NR_104078;Tx_version=.,1;Tx_start=.,149194105;Tx_end=.,149194269;Overlapped_tx_length=.,164;Overlapped_CDS_length=.,0;Overlapped_CDS_percent=.,0;Exon_count=.,1;Location=.,txStart-txEnd;Location2=.,UTR;Intersect_start=.,149194105;Intersect_end=.,149194269;po_P_gain_source=dbVar:nssv15156967|dbVar:nssv15156970|dbVar:nssv15149867|nssv15151118|dbVar:nssv18842007|dbVar:nssv15140065|dbVar:nssv15127264|dbVar:nssv15140622|dbVar:nssv15142143|dbVar:nssv15139736|dbVar:nssv15136257|dbVar:nssv15137789|dbVar:nssv15135435|dbVar:nssv15132352|dbVar:nssv15127572|dbVar:nssv16736643|dbVar:nssv15135787|dbVar:nssv15121048|dbVar:nssv15132855;po_P_gain_coord=1:47852-249228449|1:82155-249218992|1:849468-249224684|1:142535936-157648813|1:143500224-149763815|1:143544036-149754161|1:143753741-151399970|1:143932351-149801420|1:144927579-153223600|1:145425396-149091187|1:145425396-149699420|1:145425396-149768855|1:145451330-156102366|1:145764500-249233096|1:145818703-149378266|1:146500973-149433185|1:147400638-149813625|1:147411535-149699420;po_P_gain_percent=0.07|0.07|0.07|1.11|2.67|2.69|2.19|2.85|2.02|1.34|3.92|3.85|1.57|0.16|4.70|5.71|6.94|7.31;po_P_loss_source=dbVar:nssv15132982|dbVar:nssv15133379|dbVar:nssv15137633|dbVar:nssv15137132|dbVar:nssv15136850|dbVar:nssv15132445|dbVar:nssv15137470|dbVar:nssv15135169|dbVar:nssv15129680|dbVar:nssv15157514|dbVar:nssv15133691|dbVar:nssv15132524|dbVar:nssv15137778;po_P_loss_coord=1:143721527-149232481|1:145388356-149418924|1:145415157-149433207|1:145626238-149244468|1:145626238-149453964|1:145655993-149232481|1:145747243-149155026|1:145987157-149232481|1:146053395-249233096|1:146089269-149376652|1:146143190-149232481|1:146143190-149699420|1:146507650-149433207;po_P_loss_percent=3.04|4.15|4.17|4.63|4.37|4.68|3.32|5.16|0.16|5.09|5.42|4.71|5.72;B_gain_source=DDD:2784|DDD:2806|TS40:ISCA-37469|dgv4e203|nsv514006,1000g|DDD:2784|DDD:2806|TS40:ISCA-37469|dgv4e203|esv3587470|nsv514006;B_gain_coord=1:147929337-149801433|1:148050780-149739249|1:148867552-149768855|1:149034710-149405578|1:149036513-149244464,1:147929337-149801433|1:148050780-149739249|1:148867552-149768855|1:149034710-149405578|1:149036513-149244464|1:149151839-149203736|1:149151839-149203736;B_gain_AFmax=0.08;B_loss_source=DDD:2784|DDD:2806|HI40:ISCA-37469|dgv375n100|dgv4e203|esv2422083|esv3894145,1000g|DDD:2784|DDD:2806|DDD:2814|HI40:ISCA-37469|HI40:ISCA-46570|dbVar|dgv375n100|dgv4e203|esv2422083|esv3587469|esv3894145|gnomAD-SV_v2.1_DEL_1_7835|gnomAD-SV_v2.1_DEL_1_7844;B_loss_coord=1:147929337-149801433|1:148050780-149739249|1:148867552-149768855|1:149034710-149405578|1:149036513-149278459|1:149036525-149256691|1:149039121-149211496,1:147929337-149801433|1:148050780-149739249|1:148867552-149768855|1:149034710-149405578|chr1:149035900-149204000|1:149035900-149204000|1:149036513-149278459|1:149036525-149256691|1:149039121-149211496|chr1:149134000-149204000|1:149134000-149204000|1:149145234-149244654|chr1:149151838-149203736|1:149151839-149203736|1:149151839-149203736|1:149152065-149204067;B_loss_AFmax=0.3041;B_inv_source=IMH;B_inv_coord=1:4599855-170869838|1:17124869-234920285|1:17225077-149220997|1:17229845-149217063|1:69129973-188838391|1:76428346-179322403|1:108097960-232960701;B_inv_AFmax=0.4999;po_B_gain_someG_source=1:148050780-149739249_DDD:2784|1:149034710-149405578_DDD:2806|1:149071635-149169501_1000g|1:149151839-149203736_1000g|1:149207861-149218152_1000g|;po_B_gain_someG_coord=1:147929337-149801433_dgv4e203|1:148867552-149768855_TS40:ISCA-37469|1:149036513-149244464_nsv514006|1:149071635-149169501_esv3587467|1:149151839-149203736_esv3587470|1:149207861-149218152_esv3587472;po_B_loss_someG_source=1:148050780-149739249_DDD:2784|1:149034710-149405578_DDD:2806|1:149035900-149053900_gnomAD-SV_v2.1_DEL_1_7834|1:149035900-149204000_gnomAD-SV_v2.1_DEL_1_7835|1:149036525-149256691_esv2422083|chr1:149046220-149046341_dbVar|1:149064634-149080509_gnomAD-SV_v2.1_DEL_1_7837|chr1:149071634-149169501_dbVar|1:149071635-149169501_esv3587466|chr1:149090849-149092378_dbVar|1:149090850-149092378_esv3587468|chr1:149132411-149132504_dbVar|chr1:149134000-149204000_dbVar|chr1:149139251-149139476_dbVar|chr1:149151838-149203736_dbVar|1:149151839-149203736_esv3587469|chr1:149156359-149156429_dbVar|chr1:149159117-149159254_dbVar|chr1:149173738-149173810_dbVar|1:149202746-149436842_DDD:2817...;po_B_loss_someG_coord=1:147929337-149801433_dgv4e203|1:148867552-149768855_HI40:ISCA-37469|chr1:149035900-149053900_dbVar|chr1:149035900-149204000_dbVar|1:149036513-149278459_dgv375n100|1:149039121-149211496_esv3894145|chr1:149064634-149080509_dbVar|chr1:149065069-149065232_dbVar|1:149071635-149169501_1000g|chr1:149077419-149077503_dbVar|1:149090850-149092378_1000g|chr1:149132411-149132463_dbVar|chr1:149133674-149133762_dbVar|1:149134000-149204000_gnomAD-SV_v2.1_DEL_1_7844|1:149145234-149244654_DDD:2814|1:149151839-149203736_1000g|1:149152065-149204067_HI40:ISCA-46570|chr1:149158275-149158337_dbVar|chr1:149162118-149162210_dbVar|chr1:149191596-149191654_dbVar...;GC_content_left=0.455;GC_content_right=0.44;Repeat_coord_right=1:149209192-149209220;Repeat_type_right=(GA)n;SegDup_left=1:149035966-149106186;SegDup_right=1:149191324-149214601|1:149200001-149214601;ENCODE_blacklist_left=1:147832001-149058800;ENCODE_blacklist_characteristics_left=High_Signal_Region;NCBI_gene_ID=.,101954269;HGNC_gene_ID=.,HGNC:48322;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=149209289;SVLEN=-167356	GT	1/.
1	196756232	.	A	<DEL>	.	PASS	AnnotSV_ID=1_196756232_196799302_DEL_1;SV_start=196756232;Biologist_ranking=Benign;Annotation_mode=full,split,split;CytoBand=q31.3;Gene_name=CFHR3|CFHR1,CFHR3,CFHR1;Closest_left=CFH;Closest_right=CFHR4;Gene_count=2;Tx=.,NM_021023,NM_002113;Tx_version=.,6,3;Tx_start=.,196743969,196788860;Tx_end=.,196764537,196801319;Overlapped_tx_length=.,8306,10442;Overlapped_CDS_length=.,563,607;Overlapped_CDS_percent=.,56,61;Frameshift=.,yes,yes;Exon_count=.,6,6;Location=.,intron3-txEnd,txStart-intron4;Location2=.,CDS-3'UTR,5'UTR-CDS;Dist_nearest_SS=.,1114,327;Nearest_SS_type=.,3',3';Intersect_start=.,196756231,196788860;Intersect_end=.,196764537,196799302;RE_gene=ASPM_(morbid/RE=EA_enhancer)|CFH_(morbid/RE=GH_promoter_enhancer);P_loss_source=dbVar:nssv15121100;P_loss_coord=1:196757279-196796716;po_P_gain_source=dbVar:nssv15156967|dbVar:nssv15156970|dbVar:nssv15149867|nssv15151118|dbVar:nssv15127572|dbVar:nssv18330594|dbVar:nssv15777262|dbVar:nssv15169967|dbVar:nssv15146388|dbVar:nssv15151024;po_P_gain_coord=1:47852-249228449|1:82155-249218992|1:849468-249224684|1:145764500-249233096|1:181453461-213107248|1:182388774-249111240|1:185644664-221698833|1:187113114-224487119|1:195483440-249213000;po_P_gain_percent=0.02|0.02|0.02|0.04|0.14|0.06|0.12|0.12|0.08;po_P_loss_source=dbVar:nssv15129680|dbVar:nssv16207750|dbVar:nssv15146573|dbVar:nssv15151287|dbVar:nssv17970297|dbVar:nssv17970308|dbVar:nssv15146667|dbVar:nssv18329566|dbVar:nssv18330283|dbVar:nssv15154062|dbVar:nssv15134156|dbVar:nssv18792867|dbVar:nssv15146075|dbVar:nssv15119768;po_P_loss_coord=1:146053395-249233096|1:177551194-199599056|1:179002041-199694025|1:179011315-199022759|1:179073387-200192265|1:179413480-201764737|1:189003615-199584994|1:189633886-199854163|1:193011754-199882947|1:195089819-197443021|1:195483440-197865624|1:196676029-196842326|1:196712877-196797546|1:196722207-196808505;po_P_loss_percent=0.04|0.20|0.21|0.22|0.20|0.19|0.41|0.42|0.63|1.83|1.81|25.90|48.80|49.91;B_gain_source=DDD:3693;B_gain_coord=1:196724161-196912840;B_gain_AFmax=0.1822;B_loss_source=1000g|DDD:3692|DDD:3693|DDD:3695|dbVar|dgv11e55|dgv6e203|dgv87e199|esv2421560|esv3588469|nsv514031|nsv517662,1000g|DDD:3692|DDD:3693|DDD:3695|DDD:3698|dbVar|dgv11e55|dgv6e203|dgv87e199|esv2421560|esv3588469|esv3588471|gnomAD-SV_v2.1_DEL_1_10680|nsv514031|nsv517662,1000g|DDD:3692|DDD:3693|DDD:3695|DDD:3706|DDD:3707|DDD:3712|dbVar|dgv11e55|dgv6e203|dgv87e199|esv2421560|esv3588469|esv3588478|nsv514031|nsv517662;B_loss_coord=1:196711068-196937536|1:196719268-196810043|1:196722346-196822692|1:196723048-196815791|1:196724161-196912840|1:196727851-196939719|chr1:196728877-196808865|1:196728878-196808865|1:196728878-196808865|1:196731149-196901753|1:196733402-196813850|1:196738898-196801697,1:196711068-196937536|1:196719268-196810043|1:196722346-196822692|1:196723048-196815791|1:196724161-196912840|1:196727851-196939719|chr1:196728877-196808865|1:196728878-196808865|1:196728878-196808865|chr1:196729000-196789200|1:196729000-196789200|1:196731149-196901753|1:196733402-196813850|chr1:196735895-196764940|1:196735896-196764940|1:196735896-196764940|1:196738624-196771280|1:196738898-196801697,1:196711068-196937536|1:196719268-196810043|1:196722346-196822692|1:196723048-196815791|1:196724161-196912840|1:196727851-196939719|chr1:196728877-196808865|1:196728878-196808865|1:196728878-196808865|1:196731149-196901753|1:196733402-196813850|1:196738898-196801697|1:196773003-196909196|1:196777327-196902217|chr1:196782355-196903873|1:196782356-196903873|1:196782356-196903873|1:196785120-196821192;B_loss_AFmax=0.4486;B_inv_source=IMH;B_inv_coord=1:17124869-234920285|1:108097960-232960701;B_inv_AFmax=0.3095;po_B_gain_someG_source=1:196748312-196757828_DDD:3701|;po_B_gain_someG_coord=1:196724161-196912840_DDD:3693|1:196792551-196801251_DDD:3714;po_B_loss_someG_source=1:196719268-196810043_DDD:3692|1:196723048-196815791_esv2421560|1:196727851-196939719_dgv6e203|1:196728878-196808865_1000g|chr1:196729000-196789200_dbVar|1:196731149-196901753_dgv11e55|chr1:196735895-196764940_dbVar|1:196735896-196764940_esv3588471|1:196738898-196801697_nsv514031|chr1:196761000-196783900_dbVar|1:196772366-196774588_1000g|1:196772602-196794300_DDD:3705|1:196777327-196902217_DDD:3707|1:196782000-196788000_gnomAD-SV_v2.1_DEL_1_10685|1:196782356-196903873_1000g|1:196785120-196821192_DDD:3712|1:196790200-196805500_gnomAD-SV_v2.1_DEL_1_10686|;po_B_loss_someG_coord=1:196711068-196937536_nsv517662|1:196722346-196822692_dgv87e199|1:196724161-196912840_DDD:3693|chr1:196728877-196808865_dbVar|1:196728878-196808865_esv3588469|1:196729000-196789200_gnomAD-SV_v2.1_DEL_1_10680|1:196733402-196813850_DDD:3695|1:196735896-196764940_1000g|1:196738624-196771280_DDD:3698|1:196748312-196757828_DDD:3701|chr1:196772365-196774588_dbVar|1:196772366-196774588_esv3588475|1:196773003-196909196_DDD:3706|chr1:196782000-196788000_dbVar|chr1:196782355-196903873_dbVar|1:196782356-196903873_esv3588478|chr1:196790200-196805500_dbVar|1:196798566-196802072_DDD:3720;GC_content_left=0.35;GC_content_right=0.285;Repeat_coord_right=1:196797933-196799242;Repeat_type_right=L1MDa;SegDup_left=1:196756102-196796319;SegDup_right=1:196796320-196825045;DDD_HI_percent=98.26,98.26,92.58;ExAC_synZ=1.07662990621103,0.6684477327677,1.07662990621103;ExAC_misZ=1.30887789301822,0.697024247535932,1.30887789301822;GenCC_disease=.,hemolytic_uremic_syndrome,_atypical,_susceptibility_to,_1,age_related_macular_degeneration_1|dense_deposit_disease|hemolytic_uremic_syndrome,_atypical,_susceptibility_to,_1;GenCC_moi=.,.,AD|AR;GenCC_classification=.,Limited,Limited|Supportive;GenCC_pmid=.,22626820,19745068|19861685|23728178[PMID]|23830046;NCBI_gene_ID=.,10878,3078;HGNC_gene_ID=.,HGNC:16980,HGNC:4888;OMIM_ID=605336|134371,605336,134371;OMIM_phenotype=.,(Hemolytic_uremic_syndrome,_atypical,_susceptibility_to),_235400_(3)_AD,AR|(Macular_degeneration,_age-related,_reduced_risk_of),_603075_(3)_AD,(Hemolytic_uremic_syndrome,_atypical,_susceptibility_to),_235400_(3)_AD,AR|(Macular_degeneration,_age-related,_reduced_risk_of),_603075_(3)_AD;OMIM_inheritance=.,AD|AD,AR,AD|AD,AR;OMIM_morbid_candidate=yes;LOEUF_bin=8;GnomAD_pLI=2.6297e-08,1.72e-11,2.6297e-08;ExAC_pLI=0.00090932,1.219e-05,0.00090932;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(2_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5;END=196799302;SVLEN=-43071	GT	1/.
1	248738899	.	G	<DEL>	.	PASS	AnnotSV_ID=1_248738899_248785562_DEL_1;SV_start=248738899;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=q44;Gene_name=OR2T10;Closest_left=OR2T34;Closest_right=OR2T11;Gene_count=1;Tx=.,NM_001004693;Tx_version=.,2;Tx_start=.,248753787;Tx_end=.,248761001;Overlapped_tx_length=.,7214;Overlapped_CDS_length=.,939;Overlapped_CDS_percent=.,97;Frameshift=.,no;Exon_count=.,2;Location=.,txStart-txEnd;Location2=.,5'UTR-3'UTR;Intersect_start=.,248753787;Intersect_end=.,248761001;po_P_gain_source=dbVar:nssv15156967|dbVar:nssv15156970|dbVar:nssv15149867|nssv15151118|dbVar:nssv15127572|dbVar:nssv15777262|dbVar:nssv15151024|dbVar:nssv18326443|dbVar:nssv16207620|dbVar:nssv15146793|dbVar:nssv15147003|dbVar:nssv15146656|dbVar:nssv16215284|dbVar:nssv15145669|dbVar:nssv15154064|dbVar:nssv15146178|dbVar:nssv18329268|dbVar:nssv15147314|dbVar:nssv15147005|dbVar:nssv15146390|dbVar:nssv15150211|dbVar:nssv15147383|dbVar:nssv15146391|dbVar:nssv15126459|dbVar:nssv15146018|dbVar:nssv15156411|dbVar:nssv15147341|dbVar:nssv15149590|dbVar:nssv15170725|dbVar:nssv15149119|dbVar:nssv15774642|dbVar:nssv15776729|dbVar:nssv15145719|dbVar:nssv15142850|dbVar:nssv15140102|dbVar:nssv15119915|dbVar:nssv15135164|dbVar:nssv18330767|dbVar:nssv15142418|dbVar:nssv15133070|dbVar:nssv15128248|dbVar:nssv18326380;po_P_gain_coord=1:47852-249228449|1:82155-249218992|1:849468-249224684|1:145764500-249233096|1:182388774-249111240|1:195483440-249213000|1:197867915-249224684|1:204045949-249218992|1:207519988-249224684|1:209819553-249225312|1:210136971-249212668|1:210152795-249218992|1:214197156-249212668|1:218252552-249224684|1:223521036-249212668|1:223972940-249224684|1:224002850-249212668|1:224016203-249185508|1:224075483-249185508|1:224105295-249224684|1:224210565-249212668|1:224284191-249212668|1:225049988-249233096|1:225626183-249060210|1:228529974-249181598|1:229158657-249212668|1:231670871-249213000|1:232232336-249218992|1:234050865-249213059|1:235582581-249224684|1:238669294-249224684|1:240407745-249185508|1:242324399-249224684|1:242656461-249213000|1:242992034-249185508|1:243095879-249158835|1:243258051-249224684|1:244197792-249224684|1:245476118-249212668|1:245665464-249233096|1:246850402-249205263;po_P_gain_percent=0.02|0.02|0.02|0.05|0.07|0.09|0.09|0.10|0.11|0.12|0.12|0.12|0.13|0.15|0.18|0.18|0.19|0.19|0.19|0.19|0.19|0.19|0.19|0.20|0.23|0.23|0.27|0.27|0.31|0.34|0.44|0.53|0.68|0.71|0.75|0.77|0.78|0.93|1.25|1.31|1.98;po_P_loss_source=dbVar:nssv15129680|dbVar:nssv18326340|dbVar:nssv15149874|dbVar:nssv15148823|dbVar:nssv15148210|dbVar:nssv15148138|dbVar:nssv15148243|dbVar:nssv15146635|dbVar:nssv15146644|dbVar:nssv15146499|dbVar:nssv15146500|dbVar:nssv18330244|dbVar:nssv15145856|dbVar:nssv15153348|dbVar:nssv15146579|dbVar:nssv15131783|dbVar:nssv18329412|dbVar:nssv15138053|dbVar:nssv15124424|dbVar:nssv18841999|dbVar:nssv15126240|dbVar:nssv15133004|dbVar:nssv15771899|dbVar:nssv15133645|dbVar:nssv15153353|dbVar:nssv15605763|dbVar:nssv18792785|dbVar:nssv15772690|dbVar:nssv16255440;po_P_loss_coord=1:146053395-249233096|1:233012995-249206918|1:235797385-249224684|1:236719383-249212668|1:237806582-249212668|1:238196876-249218733|1:238356181-249224684|1:238514422-249212668|1:238917050-249212666|1:239721731-249212668|1:239793169-249218792|1:239910961-249224684|1:240628423-249212668|1:241051171-249224684|1:241210723-249218792|1:241920552-249185508|1:242045198-249212668|1:242208582-249224684|1:243103402-249119318|1:243384761-249213309|1:243477621-249233096|1:243949932-249212668|1:244379482-249224684|1:244745426-249212668|1:244797640-249224684|1:245341154-249212429|1:245704070-249212562|1:246565045-249224684|1:246853200-249181899;po_P_loss_percent=0.05|0.29|0.35|0.37|0.41|0.42|0.43|0.44|0.45|0.49|0.50|0.50|0.54|0.57|0.58|0.64|0.65|0.67|0.78|0.80|0.81|0.89|0.96|1.04|1.05|1.21|1.33|1.75|2.00;B_loss_source=DDD:4636|DDD:4639|HI40:ISCA-46339|dbVar|dgv166e212|dgv630n100|esv2760083|esv2763780|gnomAD-SV_v2.1_DEL_1_13889,DDD:4636|DDD:4639|DDD:4645|HI40:ISCA-46339|dbVar|dgv166e212|dgv167e212|dgv630n100|dgv633n100|esv2421359|esv2660478|esv2760083|esv2763780|gnomAD-SV_v2.1_DEL_1_13889;B_loss_coord=1:248605753-248818483|1:248683401-248814080|1:248688222-248828223|1:248693963-248856466|1:248727631-248859425|1:248731000-248798200|chr1:248731000-248798200|1:248731000-248798200|1:248737436-248818471,chr1:248469040-248768529|1:248605753-248818483|1:248683401-248814080|1:248688222-248828223|1:248693963-248856466|1:248727631-248859425|1:248731000-248798200|chr1:248731000-248798200|1:248731000-248798200|1:248737436-248818471|1:248739346-248798392|1:248739502-248798200|1:248739517-248797213|1:248749183-248797201|1:248753185-248795277;B_loss_AFmax=0.2767;B_inv_source=IMH;B_inv_coord=1:248596196-248822398|1:248601499-248817009|1:248601686-248817033|1:248602851-248816084|1:248606626-248811646|1:248609654-248808661;B_inv_AFmax=0.4394;po_B_gain_someG_coord=1:248756742-248797597_1000g;po_B_loss_someG_source=1:248605753-248818483_esv2760083|1:248688222-248828223_dgv166e212|1:248712455-248757403_HI40:ISCA-46337|1:248712455-248757403_gnomAD-SV_v2.1_DEL_1_13885|1:248729000-248743000_HI40:ISCA-46338|1:248729000-248743000_gnomAD-SV_v2.1_DEL_1_13888|chr1:248731000-248798200_dbVar|1:248737436-248818471_dgv630n100|chr1:248738000-248744000_dbVar|1:248739346-248798392_esv2660478|1:248739502-248798200_DDD:4645|chr1:248741000-248749000_dbVar|chr1:248742276-248742334_dbVar|1:248753185-248795277_dgv167e212|chr1:248755655-248758478_dbVar|1:248755656-248758478_HI40:ISCA-46577|1:248755670-248758483_DDD:4648|chr1:248756741-248797597_dbVar|1:248756742-248797597_esv3589559|;po_B_loss_someG_coord=chr1:248469040-248768529_dbVar|1:248683401-248814080_esv2763780|1:248693963-248856466_DDD:4636|chr1:248712455-248757403_dbVar|1:248727631-248859425_DDD:4639|chr1:248729000-248743000_dbVar|1:248731000-248798200_HI40:ISCA-46339|1:248731000-248798200_gnomAD-SV_v2.1_DEL_1_13889|1:248738000-248744000_HI40:ISCA-46340|1:248738000-248744000_gnomAD-SV_v2.1_DEL_1_13890|chr1:248739419-248739472_dbVar|1:248739517-248797213_esv2421359|1:248741000-248749000_gnomAD-SV_v2.1_DEL_1_13892|1:248749183-248797201_dgv633n100|1:248753986-248795457_nsv514048|1:248755656-248758478_1000g|1:248755656-248758478_esv3589558|chr1:248755674-248758483_dbVar|1:248756742-248797597_1000g|1:248756881-248797809_HI40:ISCA-46576;GC_content_left=0.305;GC_content_right=0.33;SegDup_left=1:248692097-248751707;DDD_HI_percent=92.08;ExAC_synZ=0.553342166544692;ExAC_misZ=-0.565086620797697;NCBI_gene_ID=.,127069;HGNC_gene_ID=.,HGNC:19573;LOEUF_bin=9;GnomAD_pLI=0.00065559;ExAC_pLI=0.00015575;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=248785562;SVLEN=-46664	GT	1/.
2	242865921	.	T	<DEL>	.	PASS	AnnotSV_ID=2_242865921_243028452_DEL_1;SV_start=242865921;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split;CytoBand=q37.3;Gene_name=LINC01237|LINC01238|LOC285097|LINC01880,LINC01237,LINC01238,LOC285097,LINC01880;Closest_left=FAM240C;Closest_right=LINC03100;Gene_count=4;Tx=.,NR_110220,NR_110592,NR_149023,NR_146651;Tx_version=.,1,1,1,1;Tx_start=.,242823513,242912833,242943359,242989834;Tx_end=.,243020873,242919427,242948164,243026289;Overlapped_tx_length=.,154953,6594,4805,36455;Overlapped_CDS_length=.,0,0,0,0;Overlapped_CDS_percent=.,0,0,0,0;Exon_count=.,4,6,1,4;Location=.,intron2-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR,UTR,UTR;Dist_nearest_SS=.,41134,.,.,.;Nearest_SS_type=.,5',.,.,.;Intersect_start=.,242865920,242912833,242943359,242989834;Intersect_end=.,243020873,242919427,242948164,243026289;RE_gene=AGXT_(morbid/RE=ABC_enhancer)|D2HGDH_(morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer)|DTYMK_(morbid/RE=ABC_enhancer+EA_enhancer);po_P_gain_source=dbVar:nssv17976961|dbVar:nssv15174359|dbVar:nssv15174602|dbVar:nssv16254741|dbVar:nssv15147151|dbVar:nssv15147318|dbVar:nssv15146760|dbVar:nssv15121191|dbVar:nssv15134347|dbVar:nssv15120707|dbVar:nssv8639299;po_P_gain_coord=2:2-243199373|2:14239-243048760|2:15673-243101834|2:178397960-243007457|2:189682922-243007359|2:211444401-243059659|2:218966483-243059659|2:228667865-243028452|2:236177413-243059659|2:236472309-243028452|2:239873382-243006013;po_P_gain_percent=0.07|0.07|0.07|0.22|0.27|0.51|0.67|1.13|2.36|2.48|4.47;po_P_loss_phen=2q37.3_terminal_region_(includes_HDAC4);po_P_loss_source=dbVar:nssv15124851|dbVar:nssv15132233|nssv15140017|dbVar:nssv16296940|dbVar:nssv15139807|dbVar:nssv15126959|dbVar:nssv15121136|dbVar:nssv15120661|dbVar:nssv15121139|dbVar:nssv15132363|dbVar:nssv15121140|dbVar:nssv15134903|dbVar:nssv15122404|dbVar:nssv15133611|dbVar:nssv15120667|dbVar:nssv16865882|dbVar:nssv15137653|dbVar:nssv15132686|dbVar:nssv17976287|dbVar:nssv15136836|dbVar:nssv15133934|dbVar:nssv15133750|dbVar:nssv15163370|dbVar:nssv15134792|dbVar:nssv15133170|dbVar:nssv15132355|dbVar:nssv15605955|dbVar:nssv15137339|dbVar:nssv15605956|dbVar:nssv18326326|dbVar:nssv15136036|dbVar:nssv15755694|HI3:ISCA-37394|dbVar:nssv15121144|dbVar:nssv15135054|dbVar:nssv15133743|dbVar:nssv15135857|dbVar:nssv15120673|dbVar:nssv15133620|dbVar:nssv15122695|dbVar:nssv15163383|dbVar:nssv16207882|dbVar:nssv15141519|dbVar:nssv15121145;po_P_loss_coord=2:50886433-243102476|2:232634990-243059659|2:233110453-243028452|2:233784244-243040217|2:233891214-243068334|2:233995841-243028452|2:234362258-243041306|2:235081181-243028452|2:235254487-243059659|2:235576804-243059659|2:235744425-243007359|2:235937074-243008259|2:236177413-243007359|2:236649724-242974607|2:237201757-243048760|2:237322366-243059659|2:237463877-243059659|2:237619066-243048655|2:237684406-243059659|2:237875407-243007359|2:237943120-243007359|2:238037760-243101834|2:238140848-243007359|2:238434828-242938241|2:238552640-243059659|2:238795603-242918203|2:238811513-243059659|2:239071624-243048760|2:239229305-243199373|2:239742161-243059659|2:239894073-243048760|2:239954694-242930600|2:241006624-243028452|2:241006624-243059659|2:241110555-243007359|2:241127319-243059659|2:241384237-243028452|2:241446569-243007359|2:241610649-243034277|2:241847590-243101834|2:242011634-243199373|2:242045570-243040217|2:242188711-243028452;po_P_loss_percent=0.08|1.56|1.64|1.76|1.77|1.80|1.87|2.05|2.08|2.17|1.95|2.01|2.07|1.72|2.78|2.83|2.90|2.99|3.02|2.76|2.79|3.21|2.91|1.61|3.61|1.27|3.83|4.09|4.09|4.90|5.15|2.17|8.04|7.92|7.46|8.41|9.89|9.06|11.42|12.96|13.68|16.34|19.35;B_gain_source=.,.,.,TS40:ISCA-37470,1000g|TS40:ISCA-37470|dgv768e214;B_gain_coord=.,.,.,2:242930601-243102476,2:242930601-243102476|2:242988770-243037176|2:242988770-243037176;B_gain_AFmax=.,.,.,.,0.0951;B_loss_source=DDD:9221|DDD:9222|IMH|dbVar|gnomAD-SV_v2.1_DEL_2_28790,DDD:9211|DDD:9221|DDD:9222|IMH|dbVar|gnomAD-SV_v2.1_DEL_2_28790,1000g|DDD:9211|DDD:9221|DDD:9222|DDD:9226|HI40:ISCA-46585|IMH|dbVar|dgv165e55|esv3594850|esv3594853|gnomAD-SV_v2.1_DEL_2_28790,1000g|DDD:9211|DDD:9221|DDD:9222|DDD:9231|DDD:9235|HI40:ISCA-37470|HI40:ISCA-46585|IMH|dbVar|dgv165e55|dgv167e55|dgv4203n100|dgv498n27|dgv90e203|esv3594850|esv3594855|gnomAD-SV_v2.1_DEL_2_28790,1000g|DDD:9221|DDD:9222|DDD:9235|HI40:ISCA-37470|IMH|dbVar|dgv4203n100|dgv498n27|dgv90e203|esv3594857|esv3594864|gnomAD-SV_v2.1_DEL_2_28790;B_loss_coord=2:242849685-243064401|chr2:242852582-243035504|chr2:242853252-243035778|2:242853252-243035778|2:242853253-243035778|2:242853253-243035778,2:242702555-243025545|2:242849685-243064401|chr2:242852582-243035504|chr2:242853252-243035778|2:242853252-243035778|2:242853253-243035778|2:242853253-243035778,2:242516106-243014630|2:242702555-243025545|2:242849685-243064401|chr2:242852582-242959025|chr2:242852582-243035504|chr2:242853243-243019021|2:242853244-243019021|2:242853244-243019021|chr2:242853252-243035778|2:242853252-243035778|2:242853253-243035778|2:242853253-243035778|2:242867313-242921118|2:242872863-243012181|chr2:242874439-243024795|chr2:242887570-243070660|chr2:242890091-242926595|2:242890092-242926595|2:242890092-242926595|chr2:242895812-242954423,2:242516106-243014630|2:242702555-243025545|2:242849685-243064401|chr2:242852582-242959025|chr2:242852582-243035504|chr2:242853243-243019021|2:242853244-243019021|2:242853244-243019021|chr2:242853252-243035778|2:242853252-243035778|2:242853253-243035778|2:242853253-243035778|2:242872863-243012181|chr2:242874439-243024795|chr2:242887570-243070660|chr2:242895812-242954423|2:242915455-243049013|2:242915467-243089456|2:242917307-243044147|chr2:242918208-242948232|2:242918249-243014630|chr2:242919210-242952227|2:242919211-242952227|2:242919211-242952227|2:242919289-242952148|2:242922232-243083979|2:242930601-243102476|chr2:242933537-242959025|chr2:242936128-242980024|chr2:242938726-242952779|chr2:242941934-242955439,2:242849685-243064401|chr2:242852582-243035504|chr2:242853252-243035778|2:242853252-243035778|2:242853253-243035778|2:242853253-243035778|chr2:242887570-243070660|2:242915455-243049013|2:242915467-243089456|2:242917307-243044147|2:242922232-243083979|2:242930601-243102476|chr2:242944058-243035710|2:242944059-243035710|2:242944059-243035710|chr2:242988769-243037176|2:242988770-243037176|2:242988770-243037176;B_loss_AFmax=0.0686,0.0686,0.0686,0.0804,0.0804;po_B_gain_someG_source=2:242930601-243102476_TS40:ISCA-37470|2:242988770-243037176_dgv768e214|2:243027554-243069648_dgv769e214|;po_B_gain_someG_coord=2:242869276-242871593_IMH|2:242988770-243037176_1000g|2:243027554-243069648_1000g|2:243028400-243028975_nsv514985;po_B_loss_someG_source=2:242702555-243025545_DDD:9211|chr2:242851168-242874365_dbVar|2:242851169-242874365_esv3594848|chr2:242852582-243035504_dbVar|2:242852907-242902712_1000g|chr2:242853243-243019021_dbVar|2:242853244-243019021_esv3594850|2:242853252-243035778_gnomAD-SV_v2.1_DEL_2_28790|2:242853253-243035778_IMH|chr2:242860574-242892107_dbVar|2:242860575-242892107_esv3594851|2:242872863-243012181_HI40:ISCA-46585|chr2:242878551-242885258_dbVar|2:242881805-242896360_1000g|2:242881806-242896359_DDD:9229|chr2:242888545-242889711_dbVar|2:242890092-242926595_1000g|chr2:242895812-242954423_dbVar|2:242898343-242898462_1000g|chr2:242912279-242912530_dbVar...;po_B_loss_someG_coord=2:242516106-243014630_dgv165e55|2:242849685-243064401_DDD:9221|2:242851169-242874365_1000g|chr2:242852582-242959025_dbVar|chr2:242852906-242902712_dbVar|2:242852907-242902712_esv3594849|2:242853244-243019021_1000g|chr2:242853252-243035778_dbVar|2:242853253-243035778_DDD:9222|chr2:242854838-242867434_dbVar|2:242860575-242892107_1000g|2:242867313-242921118_DDD:9226|chr2:242874439-243024795_dbVar|chr2:242881804-242896360_dbVar|2:242881805-242896360_esv3594852|chr2:242887570-243070660_dbVar|chr2:242890091-242926595_dbVar|2:242890092-242926595_esv3594853|chr2:242898332-242898462_dbVar|chr2:242898343-242898462_dbVar...;GC_content_left=0.4;GC_content_right=0.46;SegDup_right=2:243007680-243062019;NCBI_gene_ID=.,101927289,101927289,.,105373979;HGNC_gene_ID=.,HGNC:49793,HGNC:49793,.,HGNC:52699;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(4_genes,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1;END=243028452;SVLEN=-162532	GT	1/.
3	62939218	.	A	<DEL>	.	PASS	AnnotSV_ID=3_62939218_65268743_DEL_1;SV_start=62939218;Biologist_annotation=VOUS_in_2017,_reclassified_in_2020;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p14.2-p14.1,p14.2,p14.2,p14.2,p14.2,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1;Gene_name=LINC00698|SYNPR|SYNPR-AS1|SNTN|CDHR18P|C3orf49|THOC7|THOC7-AS1|ATXN7|SCAANT1|PSMD6-AS2|PSMD6|PSMD6-AS1|PRICKLE2-AS1|LINC00994|PRICKLE2|PRICKLE2-AS2|PRICKLE2-AS3|PRICKLE2-DT|ADAMTS9|ADAMTS9-AS1|ADAMTS9-AS2|LINC02040,LINC00698,SYNPR,SYNPR-AS1,SNTN,CDHR18P,C3orf49,THOC7,THOC7-AS1,ATXN7,SCAANT1,PSMD6-AS2,PSMD6,PSMD6-AS1,PRICKLE2-AS1,LINC00994,PRICKLE2,PRICKLE2-AS2,PRICKLE2-AS3,PRICKLE2-DT,ADAMTS9,ADAMTS9-AS1,ADAMTS9-AS2,LINC02040;Closest_left=CADPS;Closest_right=MAGI1;Gene_count=23;Tx=.,NR_027104,NM_001130003,NR_046677,NM_001348756,NR_171774,NM_001355236,NM_025075,NR_104326,NM_001177387,NR_148359,NR_038286,NM_001271779,NR_189168,NR_045697,NR_033978,NM_001370528,NR_046701,NR_046702,NR_183712,NM_182920,NR_110150,NR_038264,NR_183715;Tx_version=.,1,2,1,2,1,2,4,1,1,2,1,2,1,1,1,1,1,1,1,2,1,1,1;Tx_start=.,63088363,63263983,63409271,63638350,63727499,63804974,63819545,63846320,63884074,63897187,63989697,63996226,63997639,64053639,64064036,64077911,64089145,64173219,64430932,64501329,64547021,64670545,65160613;Tx_end=.,63110738,63602600,63535727,63650888,63799313,63834312,63849481,63847495,63989138,63898059,63997919,64009170,64001938,64088807,64073039,64253849,64092034,64187237,64441746,64673676,64575760,64997143,65179178;Overlapped_tx_length=.,22375,338617,126456,12538,71814,29338,29936,1175,105064,872,8222,12944,4299,35168,9003,175938,2889,14018,10814,172347,28739,326598,18565;Overlapped_CDS_length=.,0,858,0,534,0,879,615,0,2838,0,0,1329,0,0,0,2535,0,0,0,5808,0,0,0;Overlapped_CDS_percent=.,0,100,0,100,0,100,100,0,100,0,0,100,0,0,0,100,0,0,0,100,0,0,0;Frameshift=.,.,no,.,no,.,no,no,.,no,.,.,no,.,.,.,no,.,.,.,no,.,.,.;Exon_count=.,7,6,5,5,9,7,8,2,13,1,3,9,2,3,4,8,4,4,4,40,3,6,5;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR;Intersect_start=.,63088363,63263983,63409271,63638350,63727499,63804974,63819545,63846320,63884074,63897187,63989697,63996226,63997639,64053639,64064036,64077911,64089145,64173219,64430932,64501329,64547021,64670545,65160613;Intersect_end=.,63110738,63602600,63535727,63650888,63799313,63834312,63849481,63847495,63989138,63898059,63997919,64009170,64001938,64088807,64073039,64253849,64092034,64187237,64441746,64673676,64575760,64997143,65179178;RE_gene=SLC25A26_(morbid/RE=ABC_enhancer);P_loss_phen=Spinocerebellar_ataxia_7,_164500_(3)_AD,.,.,.,.,.,.,.,.,Spinocerebellar_ataxia_7,_164500_(3)_AD,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_source=morbid:ATXN7,.,.,.,.,.,.,.,.,morbid:ATXN7,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_coord=3:63953470-63989138,.,.,.,.,.,.,.,.,3:63953470-63989138,.,.,.,.,.,.,.,.,.,.,.,.,.,.;po_P_gain_source=dbVar:nssv15162889|dbVar:nssv15164144|dbVar:nssv15149891|nssv15151839;po_P_gain_coord=3:60175-197948027|3:61496-197838262|3:61893-197851986;po_P_gain_percent=1.18|1.18|1.18;po_P_loss_source=dbVar:nssv15146214|dbVar:nssv15774780|dbVar:nssv15148889|dbVar:nssv15147494|dbVar:nssv17956097|dbVar:nssv16207905|dbVar:nssv15150232|dbVar:nssv15146193|dbVar:nssv15120308;po_P_loss_coord=3:54079046-66046136|3:57076137-65716956|3:57174453-90309110|3:57416266-64870197|3:59332509-70686155|3:60449668-65561638|3:60526227-63742930|3:61956522-68514983|3:64746925-78459248;po_P_loss_percent=19.47|26.96|7.03|25.91|20.52|45.57|24.99|35.52|3.81;P_snvindel_nb=2,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,2,.,.,.,.,.,.,.;P_snvindel_phen=Progressive_myoclonic_epilepsy_type_5|See_cases,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Progressive_myoclonic_epilepsy_type_5|See_cases,.,.,.,.,.,.,.;B_inv_source=IMH;B_inv_coord=3:1200531-154949082|3:38627146-149162150;B_inv_AFmax=0.3422;po_B_gain_someG_source=3:63725720-63725786_gnomAD-SV_v2.1_DUP_3_8770|3:64533160-64535613_gnomAD-SV_v2.1_DUP_3_8779;po_B_gain_someG_coord=3:63224614-63225527_IMH|3:64533160-64535613_IMH;po_B_loss_someG_source=chr3:62952324-62973934_dbVar|chr3:62959476-62994696_dbVar|chr3:62959774-62994551_dbVar|chr3:62986070-62987837_dbVar|chr3:63006837-63007330_dbVar|chr3:63072271-63072321_dbVar|chr3:63103673-63107733_dbVar|3:63104370-63107212_1000g|chr3:63128000-63139500_dbVar|3:63134848-63135305_1000g|chr3:63134856-63135309_dbVar|chr3:63134857-63135309_dbVar|3:63134857-63135309_gnomAD-SV_v2.1_DEL_3_33028|chr3:63164118-63164190_dbVar|chr3:63182335-63190512_dbVar|chr3:63184629-63185275_dbVar|chr3:63256602-63256696_dbVar|chr3:63321371-63322219_dbVar|chr3:63347273-63347343_dbVar|chr3:63382056-63382224_dbVar...;po_B_loss_someG_coord=chr3:62938181-62985344_dbVar|chr3:62959345-62994669_dbVar|chr3:62959750-62999530_dbVar|chr3:62986062-62987807_dbVar|chr3:62992485-62993266_dbVar|chr3:63059041-63059108_dbVar|chr3:63081900-63082834_dbVar|chr3:63104369-63107212_dbVar|chr3:63119026-63120115_dbVar|chr3:63134847-63135305_dbVar|3:63134848-63135305_esv3596388|3:63134857-63135309_DDD:10454|3:63134857-63135309_esv2677248|3:63134858-63135309_IMH|chr3:63166947-63171818_dbVar|chr3:63184317-63184367_dbVar|chr3:63244236-63244406_dbVar|chr3:63299578-63299744_dbVar|chr3:63343372-63344883_dbVar|chr3:63353029-63353568_dbVar...;GC_content_left=0.355;GC_content_right=0.43;Repeat_coord_left=3:62939271-62939427;Repeat_type_left=MER5A1;Repeat_coord_right=3:65268746-65268796|3:65268797-65269299;Repeat_type_right=LTR16B|L1MB2;DDD_HI_percent=68.54,.,27.35,.,66.14,.,68.54,7.39,.,17.72,.,.,8.63,.,.,.,19.72,.,.,.,31.58,.,.,.;ExAC_delZ=0.730304227093642,.,.,.,0.0947592166796515,.,.,0.226822637024357,.,0.730304227093642,.,.,0.167507008532066,.,.,.,0.557303960601498,.,.,.,-1.39811826175974,.,.,.;ExAC_dupZ=1.22944963357105,.,.,.,-0.338299474644844,.,.,-2.4455441384945,.,0.636006512326363,.,.,0.979835184836382,.,.,.,1.22944963357105,.,.,.,-0.477054147176997,.,.,.;ExAC_cnvZ=1.15014257139245,.,.,.,-0.173049359454575,.,.,-1.79937886551949,.,0.862222958307612,.,.,0.835574002005388,.,.,.,1.15014257139245,.,.,.,-0.711187689176027,.,.,.;ExAC_synZ=0.85336181383742,.,-0.433167561551584,.,-0.0258588646723899,.,.,-0.696357556154856,.,0.85336181383742,.,.,-0.764855351937167,.,.,.,0.337534415605819,.,.,.,-0.797615479905467,.,.,.;ExAC_misZ=2.61388539526619,.,-0.551647400212283,.,-1.1196806141136,.,.,1.21996216564798,.,0.386394557252369,.,.,1.81088903222596,.,.,.,2.61388539526619,.,.,.,0.510431064472241,.,.,.;GenCC_disease=.,.,.,.,.,.,.,.,.,autosomal_dominant_cerebellar_ataxia_type_II|spinocerebellar_ataxia_type_7,.,.,.,.,.,.,complex_neurodevelopmental_disorder|neurodevelopmental_disorder,.,.,.,ciliopathy|nephronophthisis_1,.,.,.;GenCC_moi=.,.,.,.,.,.,.,.,.,AD,.,.,.,.,.,.,AD|AR,.,.,.,AR,.,.,.;GenCC_classification=.,.,.,.,.,.,.,.,.,Moderate|Strong|Supportive,.,.,.,.,.,.,Limited,.,.,.,Limited|Supportive,.,.,.;GenCC_pmid=.,.,.,.,.,.,.,.,.,20301317[PMID]|9288099,.,.,.,.,.,.,.,.,.,.,30609407[PMID],.,.,.;NCBI_gene_ID=.,285401,132204,.,132203,100130345,132200,80145,.,6314,100861563,100507062,9861,.,100652759,100287879,166336,.,.,101929316,56999,101929335,100507098,102724763;HGNC_gene_ID=.,HGNC:27720,HGNC:16507,.,HGNC:33706,HGNC:53742,HGNC:25190,HGNC:29874,.,HGNC:10560,HGNC:43718,HGNC:44125,HGNC:9564,.,HGNC:40916,HGNC:48949,HGNC:20340,.,.,HGNC:52829,HGNC:13202,HGNC:40625,HGNC:42435,HGNC:52880;OMIM_ID=607640,.,.,.,.,.,.,.,.,607640,.,.,.,.,.,.,.,.,.,.,.,.,.,.;OMIM_phenotype=.,.,.,.,.,.,.,.,.,Spinocerebellar_ataxia_7,_164500_(3)_AD,.,.,.,.,.,.,.,.,.,.,.,.,.,.;OMIM_inheritance=.,.,.,.,.,.,.,.,.,AD,.,.,.,.,.,.,.,.,.,.,.,.,.,.;OMIM_morbid=yes,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.;LOEUF_bin=0,.,4,.,9,.,7,4,.,1,.,.,0,.,.,.,1,.,.,.,1,.,.,.;GnomAD_pLI=0.99544,.,0.0041913,.,0.00010257,.,4.0628e-08,0.0060818,.,0.9595,.,.,0.99518,.,.,.,0.99544,.,.,.,1.0004e-06,.,.,.;ExAC_pLI=0.98784,.,0.17171,.,0.0027379,.,.,0.97832,.,0.92856,.,.,0.96209,.,.,.,0.98784,.,.,.,4.2266e-07,.,.,.;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(23_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=65268743;SVLEN=-2329526	GT	1/.
3	97483034	.	A	<DEL>	.	PASS	AnnotSV_ID=3_97483034_97487074_DEL_1;SV_start=97483034;Biologist_annotation=BBS3/ARL6_promotor_overlapped;Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=q11.2;Gene_name=ARL6;Closest_left=EPHA6;Closest_right=CRYBG3;Gene_count=1;Tx=.,NM_032146;Tx_version=.,5;Tx_start=.,97483364;Tx_end=.,97520086;Overlapped_tx_length=.,3710;Overlapped_CDS_length=.,123;Overlapped_CDS_percent=.,21;Frameshift=.,no;Exon_count=.,9;Location=.,txStart-intron3;Location2=.,5'UTR-CDS;Dist_nearest_SS=.,0;Nearest_SS_type=.,5';Intersect_start=.,97483364;Intersect_end=.,97487074;P_loss_source=dbVar:nssv16214088;P_loss_coord=3:97486953-97487074;po_P_gain_source=dbVar:nssv15162889|dbVar:nssv15164144|dbVar:nssv15149891|nssv15151839|dbVar:nssv17976063|dbVar:nssv15148953|dbVar:nssv15148997;po_P_gain_coord=3:60175-197948027|3:61496-197838262|3:61893-197851986|3:72488758-99614758|3:93519465-145413168|3:93538468-103607593;po_P_gain_percent=0.00|0.00|0.00|0.01|0.01|0.04;po_P_loss_phen=Bardet-Biedl_syndrome_3,_600151_(3)_AR|Retinitis_pigmentosa_55,_613575_(3)_AR|Bardet-Biedl_syndrome_1,_modifier_of,_209900_(3)_Digenic_recessive,AR;po_P_loss_source=dbVar:nssv15147282|dbVar:nssv15146259|dbVar:nssv18842017|dbVar:nssv16254235|dbVar:nssv17171854|morbid:ARL6|dbVar:nssv18326626|dbVar:nssv17971170;po_P_loss_coord=3:93538468-116605903|3:93605516-122935530|3:93698392-124492857|3:95563097-102371126|3:97194197-97510809|3:97483602-97520073|3:97483823-97499002|3:97486953-97516893;po_P_loss_percent=0.02|0.01|0.01|0.06|1.28|9.52|21.42|0.41;P_snvindel_nb=5;P_snvindel_phen=ARL6-related_disorder|Bardet-Biedl_syndrome_1|Bardet-Biedl_syndrome_3|Retinal_dystrophy|Retinitis_pigmentosa|Retinitis_pigmentosa_55;B_loss_source=dbVar;B_loss_coord=chr3:97481287-97495551;B_loss_AFmax=0.01;B_inv_source=IMH;B_inv_coord=3:1200531-154949082|3:38627146-149162150|3:75497389-125619977;B_inv_AFmax=0.3422;po_B_loss_someG_coord=chr3:97481287-97495551_dbVar;GC_content_left=0.455;GC_content_right=0.335;HI=.,30;TS=.,0;DDD_HI_percent=10.16;ExAC_delZ=0.309918017790144;ExAC_dupZ=-0.416168538751037;ExAC_cnvZ=-0.151628993663861;ExAC_synZ=-0.139439307213778;ExAC_misZ=-0.254839803839483;GenCC_disease=.,Bardet-Biedl_syndrome|Bardet-Biedl_syndrome_3|retinitis_pigmentosa|retinitis_pigmentosa_55;GenCC_moi=.,AD|AR;GenCC_classification=.,Strong|Supportive;GenCC_pmid=.,15258860|15314642|19858128|19956407|20142850|20301537[PMID]|20301590[PMID]|20333246|21282186|22085962|22334370|250666|26355662|26489029|27124789|27486776|28130426|28502102|31736247;NCBI_gene_ID=.,84100;HGNC_gene_ID=.,HGNC:13210;OMIM_ID=608845;OMIM_phenotype=.,Bardet-Biedl_syndrome_3,_600151_(3)_AR|Retinitis_pigmentosa_55,_613575_(3)_AR|(Bardet-Biedl_syndrome_1,_modifier_of),_209900_(3)_Digenic_recessive,AR;OMIM_inheritance=.,AR|Digenic_recessive,AR;OMIM_morbid=yes;OMIM_morbid_candidate=yes;LOEUF_bin=5;GnomAD_pLI=0.01013;ExAC_pLI=0.0042709;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=5,full=5;END=97487074;SVLEN=-4041	GT	1/.
3	195419169	.	A	<DEL>	.	PASS	AnnotSV_ID=3_195419169_195472855_DEL_1;SV_start=195419169;Biologist_ranking=Benign;Annotation_mode=full,split,split,split;CytoBand=q29;Gene_name=MIR570HG|MIR570|MUC20,MIR570HG,MIR570,MUC20;Closest_left=SDHAP2;Closest_right=MUC4;Gene_count=3;Tx=.,NR_122105,NR_030296,NM_001282506;Tx_version=.,1,1,2;Tx_start=.,195415368,195426271,195447848;Tx_end=.,195438746,195426368,195460422;Overlapped_tx_length=.,19578,97,12574;Overlapped_CDS_length=.,0,0,2130;Overlapped_CDS_percent=.,0,0,100;Frameshift=.,.,.,no;Exon_count=.,5,1,4;Location=.,intron2-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR,5'UTR-3'UTR;Dist_nearest_SS=.,2859,.,.;Nearest_SS_type=.,5',.,.;Intersect_start=.,195419168,195426271,195447848;Intersect_end=.,195438746,195426368,195460422;RE_gene=ABCB7_(morbid/RE=mTL_miRNA)|ABHD5_(morbid/RE=mTL_miRNA)|ADAM22_(morbid/RE=mTL_miRNA)|ANXA11_(morbid/RE=mTL_miRNA)|ARL6IP1_(morbid/RE=mTL_miRNA)|ATP6V1B2_(morbid/RE=mTL_miRNA)|BICD2_(morbid/RE=mTL_miRNA)|BLOC1S6_(morbid/RE=mTL_miRNA)|BTD_(morbid/RE=mTL_miRNA)|CALM1_(morbid/RE=mTL_miRNA)|CALM3_(morbid/RE=mTL_miRNA)|CAVIN1_(morbid/RE=mTL_miRNA)|CBFB_(morbid/RE=mTL_miRNA)|CCDC115_(morbid/RE=mTL_miRNA)|CDKN1B_(HI=3/morbid/RE=mTL_miRNA)|CHD1_(morbid/RE=mTL_miRNA)|CHSY1_(morbid/RE=mTL_miRNA)|CLCN3_(morbid/RE=mTL_miRNA)|CRTAP_(morbid/RE=mTL_miRNA)|CSNK2A1_(morbid/RE=mTL_miRNA)|DDHD1_(morbid/RE=mTL_miRNA)|ELOVL5_(morbid/RE=mTL_miRNA)|EPG5_(morbid/RE=mTL_miRNA)|ESCO2_(morbid/RE=mTL_miRNA)|EXOC2_(morbid/RE=mTL_miRNA)|FBXW7_(morbid/RE=mTL_miRNA)|FTH1_(morbid/RE=mTL_miRNA)|GDF6_(morbid/RE=mTL_miRNA)|GSR_(morbid/RE=mTL_miRNA)|HNRNPA2B1_(morbid/RE=mTL_miRNA)|IGF1R_(HI=3/morbid/RE=mTL_miRNA)|IL6R_(morbid/RE=mTL_miRNA)|IREB2_(morbid/RE=mTL_miRNA)|KCNB1_(morbid/RE=mTL_miRNA)|KLHL15_(morbid/RE=mTL_miRNA)|KREMEN1_(morbid/RE=mTL_miRNA)|LEMD2_(morbid/RE=mTL_miRNA)|MRPL3_(morbid/RE=mTL_miRNA)|MYO1C_(morbid/RE=mTL_miRNA)|NDRG1_(morbid/RE=mTL_miRNA)|NDUFA12_(morbid/RE=mTL_miRNA)|P3H2_(morbid/RE=mTL_miRNA)|PAX2_(HI=3/morbid/RE=mTL_miRNA)|PCYT1A_(morbid/RE=GH_promoter_enhancer)|PEX2_(morbid/RE=mTL_miRNA)|PGK1_(morbid/RE=mTL_miRNA)|PHF6_(HI=3/morbid/RE=mTL_miRNA)|RAC1_(morbid/RE=mTL_miRNA)|RNF168_(morbid/RE=GH_enhancer+GH_promoter_enhancer)|SAMD12_(morbid/RE=mTL_miRNA)...;po_P_gain_source=dbVar:nssv15162889|dbVar:nssv15164144|dbVar:nssv15149891|nssv15151839|dbVar:nssv15148025|dbVar:nssv15146977|dbVar:nssv15145927|dbVar:nssv15147555|dbVar:nssv15147518|dbVar:nssv15145707|dbVar:nssv15149548|dbVar:nssv15148262|dbVar:nssv15146719|dbVar:nssv18326383|dbVar:nssv15164224|dbVar:nssv15147464|dbVar:nssv15148839|dbVar:nssv15142547|dbVar:nssv15153539|dbVar:nssv17976740|dbVar:nssv15153542|dbVar:nssv15153544|dbVar:nssv15164241|dbVar:nssv15152868|dbVar:nssv15755821|dbVar:nssv15146377|dbVar:nssv15146980|dbVar:nssv15153546|dbVar:nssv15145873|dbVar:nssv15149008|dbVar:nssv15145905|dbVar:nssv15146981|dbVar:nssv16254509|dbVar:nssv16736615|dbVar:nssv15148110;po_P_gain_coord=3:60175-197948027|3:61496-197838262|3:61893-197851986|3:103145727-197837049|3:147239680-197823436|3:151818302-197845254|3:155836231-197851986|3:156039668-197840323|3:157011168-197861598|3:158980632-197766890|3:165854998-197851986|3:167885357-197837049|3:171549422-198022430|3:173281267-197838262|3:175886314-197845254|3:176157700-197845254|3:177246494-197837049|3:182539235-197851986|3:183498521-197851986|3:184003968-197851986|3:186374366-197851986|3:186374672-197838262|3:187913568-197851986|3:188386567-197838262|3:188983161-197837049|3:190385453-197837049|3:191593620-197851986|3:192470727-197845254|3:193422395-197851986|3:194013987-197837069|3:194145226-197895629|3:195068029-197851986|3:195419169-197387258|3:195438670-197837049;po_P_gain_percent=0.03|0.03|0.03|0.06|0.11|0.12|0.13|0.13|0.13|0.14|0.17|0.18|0.20|0.22|0.24|0.25|0.26|0.35|0.37|0.39|0.47|0.47|0.54|0.57|0.61|0.72|0.86|1.00|1.21|1.40|1.43|1.93|2.73|1.43;po_P_loss_source=dbVar:nssv15146266|dbVar:nssv15128822|dbVar:nssv15165459|dbVar:nssv17955845|dbVar:nssv17955930|dbVar:nssv15145831;po_P_loss_coord=3:185203638-197837049|3:185599935-196462295|3:189101447-197838262|3:189608637-197532175|3:191866467-197842171|3:194059264-197420612;po_P_loss_percent=0.42|0.49|0.61|0.68|0.90|1.60;B_gain_source=DDD:12528|TS40:ISCA-46592|esv2760775|esv2763776,1000g|DDD:12519|DDD:12528|DDD:12530|TS40:ISCA-46592|dgv967e214|esv2760775|esv2763776,1000g|DDD:12519|DDD:12528|DDD:12530|TS40:ISCA-46592|dgv967e214|esv2760775|esv2763776,DDD:12519|DDD:12528|DDD:12530|TS40:ISCA-46592|esv2760775|esv2763776;B_gain_coord=3:195240825-195502119|3:195376589-195493533|3:195383143-195502119|3:195385823-195474165,3:195240825-195502119|3:195320057-195470538|3:195376589-195493533|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776,3:195240825-195502119|3:195320057-195470538|3:195376589-195493533|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776,3:195240825-195502119|3:195320057-195470538|3:195376589-195493533|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708;B_gain_AFmax=0.03,0.4682,0.4682,0.0556;B_loss_source=DDD:12528|esv2760775|esv2763776,DDD:12519|DDD:12528|DDD:12530|HI40:ISCA-46589|dgv5017n100|esv2760775|esv2763776,DDD:12519|DDD:12528|DDD:12530|HI40:ISCA-46589|dgv5017n100|esv2760775|esv2763776,DDD:12519|DDD:12528|DDD:12530|HI40:ISCA-46589|esv2760775|esv2763776;B_loss_coord=3:195240825-195502119|3:195383143-195502119|3:195385823-195474165,3:195240825-195502119|3:195320057-195470538|3:195380279-195469564|3:195383131-195446910|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708,3:195240825-195502119|3:195320057-195470538|3:195380279-195469564|3:195383131-195446910|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708,3:195240825-195502119|3:195320057-195470538|3:195380279-195469564|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708;B_loss_AFmax=0.03,0.0746,0.0746,0.0746;B_inv_source=IMH;B_inv_coord=3:195371562-197367616|3:195376259-197363816|3:195409822-195693354|3:195413625-195689159|3:195417390-195684632|3:195418302-195683569;B_inv_AFmax=0.1142;po_B_gain_someG_source=3:195320057-195470538_DDD:12519|3:195383143-195502119_esv2760775|3:195417631-195471708_DDD:12530|3:195417836-195445776_1000g|3:195417836-195445776_1000g|3:195428197-195442889_nsv515001|3:195452013-195457240_1000g|3:195454692-195475463_DDD:12537|3:195457142-195468593_1000g|3:195457142-195468593_dgv969e214;po_B_gain_someG_coord=3:195240825-195502119_esv2763776|3:195376589-195493533_TS40:ISCA-46592|3:195385823-195474165_DDD:12528|3:195417836-195445776_1000g|3:195417836-195445776_1000g|3:195417836-195445776_dgv967e214|3:195452013-195457240_1000g|3:195452013-195457240_dgv968e214|3:195457000-195471300_gnomAD-SV_v2.1_DUP_3_10621|3:195457142-195468593_1000g;po_B_loss_someG_source=3:195320057-195470538_DDD:12519|3:195383131-195446910_dgv5017n100|3:195385823-195474165_DDD:12528|chr3:195425199-195425686_dbVar|3:195454692-195475463_DDD:12537|3:195457142-195471062_dgv970e214|chr3:195457317-195471062_dbVar|chr3:195463643-195463762_dbVar;po_B_loss_someG_coord=3:195240825-195502119_esv2763776|3:195380279-195469564_HI40:ISCA-46589|3:195383143-195502119_esv2760775|3:195417631-195471708_DDD:12530|chr3:195451991-195452447_dbVar|chr3:195457141-195468593_dbVar|3:195457249-195471074_dgv906e199|3:195457318-195471062_1000g;GC_content_left=0.47;GC_content_right=0.415;Repeat_coord_left=3:195418975-195419071;Repeat_type_left=MER3;SegDup_left=3:195413607-195420395;ENCODE_blacklist_left=3:195341901-195476900;ENCODE_blacklist_characteristics_left=High_Signal_Region;ENCODE_blacklist_right=3:195341901-195476900;ENCODE_blacklist_characteristics_right=High_Signal_Region;DDD_HI_percent=95.22,.,.,95.22;NCBI_gene_ID=.,440993,693155,200958;HGNC_gene_ID=.,HGNC:53743,HGNC:32826,HGNC:23282;LOEUF_bin=6,.,.,6;GnomAD_pLI=0.0047211,.,.,0.0047211;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(3_genes,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1;END=195472855;SVLEN=-53687	GT	1/.
4	71553	.	G	<DEL>	.	PASS	AnnotSV_ID=4_71553_9371067_DEL_1;SV_start=71553;Biologist_annotation=4p-_syndrom;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p16.3-p16.1,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3-p16.2,p16.3,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2-p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1;Gene_name=ZNF595|ZNF718|ZNF876P|ZNF732|ZNF141|MIR571|ABCA11P|ZNF721|PIGG|TMEM271|LOC105374338|PDE6B|PDE6B-AS1|ATP5ME|MYL5|SLC49A3|PCGF3|PCGF3-AS1|CPLX1|GAK|TMEM175|DGKQ|SLC26A1|IDUA|FGFRL1|RNF212|LOC105374344|TMED11P|SPON2|LOC100130872|CTBP1-AS|CTBP1|CTBP1-DT|MAEA|UVSSA|NKX1-1|FAM53A|SLBP|TMEM129|TACC3|FGFR3|LETM1|NSD2|SCARNA22|NELFA|MIR943|NICOL1|NAT8L|POLN|HAUS3|MXD4|MIR4800|ZFYVE28|CFAP99|RNF4|FAM193A|TNIP2|SH3BP2|ADD1|MFSD10|NOP14-AS1|NOP14|GRK4|HTT-AS|HTT|MSANTD1|RGS12|HGFAC|DOK7|LRPAP1|LINC00955|LINC02171|ADRA2C|FAM86EP|OTOP1|TMEM128|LYAR|ZBTB49|NSG1|STX18|STX18-IT1|STX18-AS1|SNORD162|LOC101928279|LINC01396|MSX1|LOC101928306|CYTL1|STK32B|LINC01587|EVC2|EVC|CRMP1|MIR378D1|C4orf50|JAKMIP1|LOC128125818|JAKMIP1-DT|WFS1|PPP2R2C|MAN2B2|MRFAP1|LINC02482|MRFAP1L2|LINC02481|S100P|MRFAP1L1|BLOC1S4|KIAA0232|TBC1D14|LOC100129931|CFAP184|TADA2B|GRPEL1|LINC02447|SORCS2|MIR4798|PSAPL1|MIR4274|AFAP1-AS1|AFAP1|LOC389199|ABLIM2|MIR95|SH3TC1|HTRA3|LINC02517|ACOX3|TRMT44|GPR78|CPZ|LOC101928532|HMX1|FAM90A26|USP17L10|USP17L11|USP17L12|USP17L13|USP17L15|USP17L17|USP17L18|USP17L19|USP17L20|USP17L21|USP17L22|USP17L24|USP17L25|USP17L26|USP17L5|USP17L27|USP17L28|USP17L29|USP17L9P|USP17L30|USP17L6P,ZNF595,ZNF718,ZNF876P,ZNF732,ZNF141,MIR571,ABCA11P,ZNF721,PIGG,TMEM271,LOC105374338,PDE6B,PDE6B-AS1,ATP5ME,MYL5,SLC49A3,PCGF3,PCGF3-AS1,CPLX1,GAK,TMEM175,DGKQ,SLC26A1,IDUA,FGFRL1,RNF212,LOC105374344,TMED11P,SPON2,LOC100130872,CTBP1-AS,CTBP1,CTBP1-DT,MAEA,UVSSA,NKX1-1,FAM53A,SLBP,TMEM129,TACC3,FGFR3,LETM1,NSD2,SCARNA22,NELFA,MIR943,NICOL1,NAT8L,POLN,HAUS3,MXD4,MIR4800,ZFYVE28,CFAP99,RNF4,FAM193A,TNIP2,SH3BP2,ADD1,MFSD10,NOP14-AS1,NOP14,GRK4,HTT-AS,HTT,MSANTD1,RGS12,HGFAC,DOK7,LRPAP1,LINC00955,LINC02171,ADRA2C,FAM86EP,OTOP1,TMEM128,LYAR,ZBTB49,NSG1,STX18,STX18-IT1,STX18-AS1,SNORD162,LOC101928279,LINC01396,MSX1,LOC101928306,CYTL1,STK32B,LINC01587,EVC2,EVC,CRMP1,MIR378D1,C4orf50,JAKMIP1,LOC128125818,JAKMIP1-DT,WFS1,PPP2R2C,MAN2B2,MRFAP1,LINC02482,MRFAP1L2,LINC02481,S100P,MRFAP1L1,BLOC1S4,KIAA0232,TBC1D14,LOC100129931,CFAP184,TADA2B,GRPEL1,LINC02447,SORCS2,MIR4798,PSAPL1,MIR4274,AFAP1-AS1,AFAP1,LOC389199,ABLIM2,MIR95,SH3TC1,HTRA3,LINC02517,ACOX3,TRMT44,GPR78,CPZ,LOC101928532,HMX1,FAM90A26,USP17L10,USP17L11,USP17L12,USP17L13,USP17L15,USP17L17,USP17L18,USP17L19,USP17L20,USP17L21,USP17L22,USP17L24,USP17L25,USP17L26,USP17L5,USP17L27,USP17L28,USP17L29,USP17L9P,USP17L30,USP17L6P;Closest_right=DEFB131A;Gene_count=155;Tx=.,NM_001286052,NM_001039127,NR_027481,NM_001137608,NM_003441,NR_030297,NR_002451,NM_133474,NM_001127178,NM_001362796,NR_148199,NM_000283,NR_183810,NM_007100,NM_001395441,NM_001294341,NM_001317836,NR_171661,NM_006651,NM_005255,NM_032326,NM_001347,NM_022042,NM_000203,NM_001004356,NM_001131034,NR_134676,NR_033768,NM_001199021,NR_024569,NR_104331,NM_001377186,NR_033339,NM_001017405,NM_001317934,NM_001290079,NM_001174070,NM_006527,NM_001127266,NM_006342,NM_001163213,NM_012318,NM_001042424,NR_003004,NM_005663,NR_030641,NM_001141936,NM_178557,NM_181808,NM_001303143,NM_006454,NR_039964,NM_020972,NM_001193282,NM_002938,NM_001366318,NM_024309,NM_001145856,NM_001354761,NM_001410703,NR_015453,NM_001291978,NM_182982,NR_045414,NM_002111,NM_001042690,NM_001394155,NM_001297439,NM_001301071,NM_002337,NR_040045,NR_034136,NM_000683,NR_130740,NM_177998,NM_001297551,NM_017816,NM_001330625,NM_001382227,NM_016930,NR_126434,NR_037888,NR_145783,NR_125892,NR_125765,NM_002448,NR_125893,NM_018659,NM_018401,NR_126519,NM_147127,NM_153717,NM_001014809,NR_039608,NM_001364689,NM_001099433,NM_001415001,NR_037863,NM_001145853,NM_020416,NM_015274,NM_001272053,NR_134664,NM_138699,NR_147207,NM_005980,NM_203462,NM_018366,NM_001100590,NM_001113361,NR_033828,NM_153376,NM_152293,NM_025196,NR_027441,NM_020777,NR_039961,NM_001085382,NR_036238,NR_026892,NM_001134647,NR_172651,NM_001130083,NR_029511,NM_018986,NM_053044,NR_149125,NM_003501,NM_152544,NM_080819,NM_001014447,NR_187901,NM_018942,NM_001358418,NM_001256852,NM_001256854,NM_001256853,NM_001256855,NM_001256894,NM_001256857,NM_001256859,NM_001256860,NM_001256861,NM_001256862,NM_001256863,NM_001242327,NM_001242326,NM_001242328,NM_001242329,NM_001242330,NM_001242331,NM_001242332,NR_046416,NM_001256867,NR_027279;Tx_version=.,2,6,1,3,4,1,2,4,3,2,1,4,1,4,1,2,3,1,4,4,4,4,4,5,3,4,1,1,2,1,1,1,1,3,2,1,3,4,2,3,2,3,3,1,5,1,3,4,4,2,3,1,3,4,5,2,4,2,2,1,2,2,3,2,8,2,1,2,2,4,1,1,4,1,3,2,3,2,1,4,1,1,1,1,1,3,1,3,3,1,5,3,3,1,3,2,1,1,1,4,3,2,1,3,1,3,3,3,2,2,1,3,3,4,1,3,1,2,1,1,2,1,2,1,5,5,1,3,3,5,3,1,3,3,1,1,1,1,2,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1;Tx_start=.,53214,124382,206388,264463,331602,343945,419223,433776,492998,567668,570956,619361,646693,666224,668330,675617,699620,754230,778744,843064,926247,952674,981444,980831,1005413,1065265,1107426,1108984,1160719,1189570,1203907,1205232,1243227,1283678,1340995,1396719,1641613,1694457,1717678,1723247,1795019,1813205,1873119,1976362,1984449,1988110,2043721,2061053,2073644,2230075,2249158,2251803,2271323,2420681,2470832,2538373,2743374,2819896,2845570,2932293,2937272,2939662,2965297,3047865,3076407,3250885,3287617,3443694,3465032,3505338,3578595,3675319,3768111,3943486,4190452,4237268,4269427,4291977,4388828,4420694,4477847,4543857,4666052,4763486,4846163,4861391,4922534,5016312,5053206,5526295,5564165,5712927,5822490,5925001,5961101,6027925,6066703,6202459,6271576,6322307,6576915,6642411,6672454,6675801,6689174,6695604,6709427,6717900,6784453,6911192,7032280,7042575,7045098,7060621,7099150,7194264,7312176,7432011,7461754,7755816,7760440,7940727,7967053,8007027,8201016,8271480,8321902,8368008,8442503,8582118,8594491,8747121,8868773,9172134,9212382,9217130,9221877,9226621,9236110,9245604,9250355,9255103,9259849,9264597,9269344,9326890,9331636,9336383,9341128,9345873,9350618,9355363,9360107,9364854,9369599;Tx_end=.,88096,157952,249774,299263,378657,344041,467998,492945,533989,570084,578655,664571,648989,668065,675817,682940,763877,775637,819917,926104,952444,967357,987192,998352,1020686,1107352,1126763,1116952,1202632,1202750,1212379,1242918,1246795,1333925,1381837,1400230,1686040,1714046,1723050,1746898,1810594,1857883,1983919,1976487,2010701,1988204,2045691,2070816,2243848,2243848,2263836,2251883,2420372,2464729,2517584,2734300,2758063,2842823,2931789,2936552,2952805,2965133,3042487,3076351,3245687,3258340,3441640,3451213,3503209,3534149,3592712,3679582,3770253,3957155,4228656,4249950,4291881,4323510,4420785,4543775,4483427,4712665,4666150,4789101,4852554,4865663,4990398,5021185,5502716,5529528,5710286,5816032,5894813,5925055,6020158,6202276,6071889,6235663,6304992,6474341,6625089,6644456,6675608,6677774,6692246,6698897,6711592,6719391,6885891,7034841,7047958,7044728,7059679,7069791,7105103,7744554,7312251,7436657,7461845,7780655,7941588,7942023,8160540,8007108,8242830,8308825,8325692,8442450,8478282,8591750,8621479,8749448,8873565,9178456,9213975,9218723,9223470,9228214,9237772,9247197,9251948,9256696,9261442,9266190,9270937,9328483,9333229,9337976,9342721,9347466,9352211,9356956,9361700,9366447,9370796;Overlapped_tx_length=.,16544,33570,43386,34800,47055,96,48775,59169,40991,2416,7699,45210,2296,1841,7487,7323,64257,21407,41173,83040,26197,14683,5748,17521,15273,42087,19337,7968,41913,13180,8472,37686,3568,50247,40842,3511,44427,19589,5372,23651,15575,44678,110800,125,26252,94,1970,9763,170204,13773,14678,80,149049,44048,46752,195927,14689,22927,86219,4259,15533,25471,77190,28486,169280,7455,154023,7519,38177,28811,14117,4263,2142,13669,38204,12682,22454,31533,31957,123081,5580,168808,98,25615,6391,4272,67864,4873,449510,3233,146121,103105,72323,54,59057,174351,5186,33204,33416,152034,48174,2045,3154,1973,3072,3293,2165,1491,101438,123649,15678,2153,14581,9170,5953,550290,75,4646,91,24839,181148,1296,193487,81,41814,37345,3790,74442,35779,9632,26988,2327,4792,6322,1593,1593,1593,1593,1662,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1197;Overlapped_CDS_length=.,1709,1239,0,1758,1425,0,0,2772,2952,1158,0,2565,0,210,522,1683,729,0,405,3936,1515,2829,2106,1962,1515,894,0,0,996,0,0,1326,0,1191,2130,1347,1197,813,1089,2517,2427,2220,4098,0,1587,0,288,909,2703,1812,630,0,2664,1941,573,4548,1290,1857,2400,1443,0,2574,1737,0,9429,837,4344,1989,1827,1074,0,0,1389,0,1839,498,1140,2298,585,1008,0,0,0,0,0,912,0,411,1245,0,3927,2979,2061,0,4527,2496,138,0,2673,1344,3030,384,0,360,0,288,384,654,4188,2082,0,1668,1263,654,0,3480,0,1566,0,0,2445,0,1938,0,4011,1362,0,2103,2274,1092,1959,0,1047,1395,1593,1593,1593,1593,1662,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,0,1593,0;Overlapped_CDS_percent=.,92,100,0,100,100,0,0,100,100,83,0,100,0,100,100,100,100,0,100,100,100,100,100,100,100,100,0,0,100,0,0,100,0,100,100,100,100,100,100,100,100,100,100,0,100,0,100,100,100,100,100,0,100,100,100,100,100,100,100,100,0,100,100,0,100,100,100,100,100,100,0,0,72,0,100,100,100,100,100,100,0,0,0,0,0,100,0,100,100,0,100,100,100,0,100,100,100,0,100,100,100,96,0,19,0,100,61,44,100,100,0,96,100,100,0,100,0,96,0,0,100,0,100,0,100,100,0,100,100,100,100,0,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,0,100,0;Frameshift=.,yes,no,.,no,no,.,.,no,no,no,.,no,.,no,no,no,no,.,no,no,no,no,no,no,no,no,.,.,no,.,.,no,.,no,no,no,no,no,no,no,no,no,no,.,no,.,no,no,no,no,no,.,no,no,no,no,no,no,no,no,.,no,no,.,no,no,no,no,no,no,.,.,no,.,no,no,no,no,no,no,.,.,.,.,.,no,.,no,no,.,no,no,no,.,no,no,no,.,no,no,no,no,.,no,.,no,no,no,no,no,.,no,no,no,.,no,.,no,.,.,no,.,no,.,no,no,.,no,no,no,no,.,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,.,no,.;Exon_count=.,8,6,2,4,4,1,3,3,13,1,3,22,3,4,9,10,12,3,4,28,11,23,3,14,7,10,3,4,8,4,6,9,2,9,14,2,5,8,4,16,18,14,22,1,11,1,4,3,26,6,6,1,13,16,8,21,6,13,16,12,4,18,16,4,67,3,18,15,10,8,3,3,1,4,6,5,10,8,6,11,4,6,1,3,4,2,3,4,12,4,22,21,14,1,12,21,2,4,8,9,19,3,2,1,3,2,2,1,9,14,4,1,2,4,2,27,1,1,1,2,18,1,21,1,18,9,4,18,11,3,11,3,2,7,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1;Location=.,intron2-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,CDS-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR;Dist_nearest_SS=.,12103,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;Nearest_SS_type=.,5',.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;Intersect_start=.,71552,124382,206388,264463,331602,343945,419223,433776,492998,567668,570956,619361,646693,666224,668330,675617,699620,754230,778744,843064,926247,952674,981444,980831,1005413,1065265,1107426,1108984,1160719,1189570,1203907,1205232,1243227,1283678,1340995,1396719,1641613,1694457,1717678,1723247,1795019,1813205,1873119,1976362,1984449,1988110,2043721,2061053,2073644,2230075,2249158,2251803,2271323,2420681,2470832,2538373,2743374,2819896,2845570,2932293,2937272,2939662,2965297,3047865,3076407,3250885,3287617,3443694,3465032,3505338,3578595,3675319,3768111,3943486,4190452,4237268,4269427,4291977,4388828,4420694,4477847,4543857,4666052,4763486,4846163,4861391,4922534,5016312,5053206,5526295,5564165,5712927,5822490,5925001,5961101,6027925,6066703,6202459,6271576,6322307,6576915,6642411,6672454,6675801,6689174,6695604,6709427,6717900,6784453,6911192,7032280,7042575,7045098,7060621,7099150,7194264,7312176,7432011,7461754,7755816,7760440,7940727,7967053,8007027,8201016,8271480,8321902,8368008,8442503,8582118,8594491,8747121,8868773,9172134,9212382,9217130,9221877,9226621,9236110,9245604,9250355,9255103,9259849,9264597,9269344,9326890,9331636,9336383,9341128,9345873,9350618,9355363,9360107,9364854,9369599;Intersect_end=.,88096,157952,249774,299263,378657,344041,467998,492945,533989,570084,578655,664571,648989,668065,675817,682940,763877,775637,819917,926104,952444,967357,987192,998352,1020686,1107352,1126763,1116952,1202632,1202750,1212379,1242918,1246795,1333925,1381837,1400230,1686040,1714046,1723050,1746898,1810594,1857883,1983919,1976487,2010701,1988204,2045691,2070816,2243848,2243848,2263836,2251883,2420372,2464729,2517584,2734300,2758063,2842823,2931789,2936552,2952805,2965133,3042487,3076351,3245687,3258340,3441640,3451213,3503209,3534149,3592712,3679582,3770253,3957155,4228656,4249950,4291881,4323510,4420785,4543775,4483427,4712665,4666150,4789101,4852554,4865663,4990398,5021185,5502716,5529528,5710286,5816032,5894813,5925055,6020158,6202276,6071889,6235663,6304992,6474341,6625089,6644456,6675608,6677774,6692246,6698897,6711592,6719391,6885891,7034841,7047958,7044728,7059679,7069791,7105103,7744554,7312251,7436657,7461845,7780655,7941588,7942023,8160540,8007108,8242830,8308825,8325692,8442450,8478282,8591750,8621479,8749448,8873565,9178456,9213975,9218723,9223470,9228214,9237772,9247197,9251948,9256696,9261442,9266190,9270937,9328483,9333229,9337976,9342721,9347466,9352211,9356956,9361700,9366447,9370796;RE_gene=ACACA_(morbid/RE=mTL_miRNA)|ACTC1_(morbid/RE=mTL_miRNA)|ACVR1_(morbid/RE=mTL_miRNA)|AGO2_(morbid/RE=mTL_miRNA)|AKT1_(morbid/RE=mTL_miRNA)|ANTXR2_(morbid/RE=mTL_miRNA)|ARF1_(morbid/RE=mTL_miRNA)|ARHGDIA_(morbid/RE=mTL_miRNA)|ARL6IP1_(morbid/RE=mTL_miRNA)|ARPC1B_(morbid/RE=mTL_miRNA)|ATXN2_(morbid/RE=mTL_miRNA)|CAD_(morbid/RE=mTL_miRNA)|CALM2_(morbid/RE=mTL_miRNA)|CASK_(morbid/RE=mTL_miRNA)|CCNF_(morbid/RE=mTL_miRNA)|CELF2_(morbid/RE=mTL_miRNA)|CEP55_(morbid/RE=mTL_miRNA)|CIITA_(morbid/RE=mTL_miRNA)|CNTNAP2_(morbid/RE=mTL_miRNA)|COL18A1_(morbid/RE=mTL_miRNA)|COL1A1_(HI=3/morbid/RE=mTL_miRNA)|CREBBP_(HI=3/morbid/RE=mTL_miRNA)|CTCF_(HI=3/morbid/RE=mTL_miRNA)|DAAM2_(morbid/RE=mTL_miRNA)|DDR2_(morbid/RE=mTL_miRNA)|DDX3X_(HI=3/morbid/RE=mTL_miRNA)|EDEM3_(morbid/RE=mTL_miRNA)|EGLN1_(morbid/RE=mTL_miRNA)|ELOVL5_(morbid/RE=mTL_miRNA)|ESCO2_(morbid/RE=mTL_miRNA)|FBXO22_(morbid/RE=mTL_miRNA)|FICD_(morbid/RE=mTL_miRNA)|FLCN_(HI=3/morbid/RE=mTL_miRNA)|FLVCR1_(morbid/RE=mTL_miRNA)|FOXC1_(HI=3/morbid/RE=mTL_miRNA)|FOXP2_(HI=3/morbid/RE=mTL_miRNA)|G6PD_(morbid/RE=mTL_miRNA)|GABRB2_(morbid/RE=mTL_miRNA)|GATA6_(HI=3/morbid/RE=mTL_miRNA)|GLI2_(HI=3/morbid/RE=mTL_miRNA)|GLUL_(morbid/RE=mTL_miRNA)|GNAS_(HI=3/morbid/RE=mTL_miRNA)|HERC2_(morbid/RE=mTL_miRNA)|HFE_(morbid/RE=mTL_miRNA)|IGF1R_(HI=3/morbid/RE=mTL_miRNA)|INF2_(morbid/RE=mTL_miRNA)|ITM2B_(morbid/RE=mTL_miRNA)|KCNJ6_(morbid/RE=mTL_miRNA)|LAMA4_(morbid/RE=mTL_miRNA)|LMNB2_(morbid/RE=mTL_miRNA)...;P_gain_phen=Retinitis_pigmentosa_40|Retinitis_pigmentosa|Retinitis_pigmentosa_40,.,.,.,.,.,.,.,.,.,.,.,Retinitis_pigmentosa_40|Retinitis_pigmentosa|Retinitis_pigmentosa_40,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_gain_hpo=HP:0000547,.,.,.,.,.,.,.,.,.,.,.,HP:0000547,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_gain_source=CLN:28147|CLN:801370|dbVar:nssv15124412|dbVar:nssv15130095|dbVar:nssv15132150|dbVar:nssv15132411|dbVar:nssv15132589|dbVar:nssv15133497|dbVar:nssv15153559|dbVar:nssv15161020|dbVar:nssv16255833|dbVar:nssv16867404|dbVar:nssv17172169|dbVar:nssv17973849|dbVar:nssv18330201,.,.,.,.,.,.,.,.,.,.,.,CLN:28147|CLN:801370|dbVar:nssv15161020,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,dbVar:nssv17973849,dbVar:nssv17172169,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_gain_coord=4:127234-8667610|4:1420949-1836794|4:1737489-1808653|4:1770487-2303110|4:374558-745174|4:5567009-5587839|4:5785270-5803831|4:614356-2959936|4:619584-619584|4:619584-619655|4:619590-619662|4:72448-3848881|4:72448-5608810|4:85041-4597934|4:963689-2913553,.,.,.,.,.,.,.,.,.,.,.,4:619584-619584|4:619584-619655|4:619590-619662,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,4:5567009-5587839,4:5785270-5803831,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_phen=4p16.3_terminal_(Wolf-Hirschhorn_syndrome)_region|?Cataract_41,_116400_(3)_AD|Deafness,_AD_6|14|38,_600965_(3)_AD|Wolfram_syndrome_1,_222300_(3)_AR|Wolfram-like_syndrome,_AD,_614296_(3)_AD|Diabetes_mellitus,_noninsulin-dependent,_association_with,_125853_(3)_AD|?Spermatogenic_failure_62,_619673_(3)_AR|Recombination_rate_QTL_1,_612042_(3)|?Weyers_acrofacial_dysostosis,_193530_(3)_AD|Ellis-van_Creveld_syndrome,_225500_(3)_AR|Achondroplasia,_100800_(3)_AD|Bladder_cancer,_somatic,_109800_(3)|CATSHL_syndrome,_610474_(3)_AD,AR|Cervical_cancer,_somatic,_603956_(3)|Colorectal_cancer,_somatic,_114500_(3)|Crouzon_syndrome_with_acanthosis_nigricans,_612247_(3)_AD|Hypochondroplasia,_146000_(3)_AD|LADD_syndrome_2,_620192_(3)_AD|Muenke_syndrome,_602849_(3)_AD|Nevus,_epidermal,_somatic,_162900_(3)|SADDAN,_616482_(3)_AD|Spermatocytic_seminoma,_somatic,_273300_(3)|Thanatophoric_dysplasia,_type_I,_187600_(3)_AD|Thanatophoric_dysplasia,_type_II,_187601_(3)_AD|Cherubism,_118400_(3)_AD|Congenital_disorder_of_glycosylation_type_1EE_with_or_without_immunodeficiency,_621140_(3)_AR|Developmental_and_epileptic_encephalopathy_63,_617976_(3)_AR|Ectodermal_dysplasia_3,_Witkop_type,_189500_(3)_AD|Orofacial_cleft_5,_608874_(3)_AD|Tooth_agenesis,_selective,_1,_with_or_without_orofacial_cleft,_106600_(3)_AD|Ellis-van_Creveld_syndrome,_225500_(3)_AR|Weyers_acrofacial_dysostosis,_193530_(3)_AD|Ellis-van_Creveld_syndrome|Curry-Hall_syndrome|Fetal_akinesia_deformation_sequence_3,_618389_(3)_AR|Myasthenic_syndrome,_congenital,_10,_254300_(3)_AR|Fetal_akinesia_deformation_sequence_1|Congenital_myasthenic_syndrome_10|Fetal_akinesia_deformation_sequence_3|Huntington_disease,_143100_(3)_AD|Lopes-Maciel-Rodan_syndrome,_617435_(3)_AR|Hurler_syndrome|Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome,_617915_(3)_AD|Mucopolysaccharidosis_Ih,_607014_(3)_AR|Mucopolysaccharidosis_Ih|s,_607015_(3)_AR|Mucopolysaccharidosis_Is,_607016_(3)_AR|Mucopolysaccharidosis_type_1|Myopia_23,_AR,_615431_(3)_AR|Neurodegeneration,_childhood-onset,_with_multisystem_involvement_due_to_mitochondrial_dysfunction,_620089_(3)_AR|Neurodevelopmental_disorder_with_or_without_hypotonia,_seizures,_and_cerebellar_atrophy,_616917_(3)_AR|Blood_group,_EMM_system,_619812_(3)_AR|Night_blindness,_congenital_stationary,_AD_2,_163500_(3)_AD|Retinitis_pigmentosa-40,_613801_(3)_AR|Oculoauricular_syndrome,_612109_(3)_AR|Rauch-Steindl_syndrome,_619695_(3)_AD|UV-sensitive_syndrome_3,_614640_(3)_AR,.,.,.,.,.,.,.,.,Neurodevelopmental_disorder_with_or_without_hypotonia,_seizures,_and_cerebellar_atrophy,_616917_(3)_AR|Blood_group,_EMM_system,_619812_(3)_AR,.,.,Night_blindness,_congenital_stationary,_AD_2,_163500_(3)_AD|Retinitis_pigmentosa-40,_613801_(3)_AR,.,.,.,.,.,.,Developmental_and_epileptic_encephalopathy_63,_617976_(3)_AR,.,.,.,.,Hurler_syndrome|Mucopolysaccharidosis_Ih,_607014_(3)_AR|Mucopolysaccharidosis_Ih|s,_607015_(3)_AR|Mucopolysaccharidosis_Is,_607016_(3)_AR|Mucopolysaccharidosis_type_1,.,?Spermatogenic_failure_62,_619673_(3)_AR|Recombination_rate_QTL_1,_612042_(3),.,.,.,.,.,.,.,.,UV-sensitive_syndrome_3,_614640_(3)_AR,.,.,.,.,.,Achondroplasia,_100800_(3)_AD|Bladder_cancer,_somatic,_109800_(3)|CATSHL_syndrome,_610474_(3)_AD,AR|Cervical_cancer,_somatic,_603956_(3)|Colorectal_cancer,_somatic,_114500_(3)|Crouzon_syndrome_with_acanthosis_nigricans,_612247_(3)_AD|Hypochondroplasia,_146000_(3)_AD|LADD_syndrome_2,_620192_(3)_AD|Muenke_syndrome,_602849_(3)_AD|Nevus,_epidermal,_somatic,_162900_(3)|SADDAN,_616482_(3)_AD|Spermatocytic_seminoma,_somatic,_273300_(3)|Thanatophoric_dysplasia,_type_I,_187600_(3)_AD|Thanatophoric_dysplasia,_type_II,_187601_(3)_AD,Neurodegeneration,_childhood-onset,_with_multisystem_involvement_due_to_mitochondrial_dysfunction,_620089_(3)_AR,Rauch-Steindl_syndrome,_619695_(3)_AD,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Cherubism,_118400_(3)_AD,.,.,.,.,.,.,Huntington_disease,_143100_(3)_AD|Lopes-Maciel-Rodan_syndrome,_617435_(3)_AR,.,.,.,Fetal_akinesia_deformation_sequence_3,_618389_(3)_AR|Myasthenic_syndrome,_congenital,_10,_254300_(3)_AR|Fetal_akinesia_deformation_sequence_1|Congenital_myasthenic_syndrome_10|Fetal_akinesia_deformation_sequence_3,Myopia_23,_AR,_615431_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Ectodermal_dysplasia_3,_Witkop_type,_189500_(3)_AD|Orofacial_cleft_5,_608874_(3)_AD|Tooth_agenesis,_selective,_1,_with_or_without_orofacial_cleft,_106600_(3)_AD,.,.,.,.,.,?Weyers_acrofacial_dysostosis,_193530_(3)_AD|Ellis-van_Creveld_syndrome,_225500_(3)_AR|Ellis-van_Creveld_syndrome|Curry-Hall_syndrome,.,.,.,.,.,.,?Cataract_41,_116400_(3)_AD|Deafness,_AD_6|14|38,_600965_(3)_AD|Wolfram_syndrome_1,_222300_(3)_AR|Wolfram-like_syndrome,_AD,_614296_(3)_AD|Diabetes_mellitus,_noninsulin-dependent,_association_with,_125853_(3)_AD,.,Congenital_disorder_of_glycosylation_type_1EE_with_or_without_immunodeficiency,_621140_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Oculoauricular_syndrome,_612109_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_hpo=HP:0001989,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,HP:0001989,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_source=CLN:1313135|CLN:2672009|CLN:2834164|CLN:3496433|CLN:961843|HI3:ISCA-37429|HI3:MSX1|HI3:NSD2|dbVar:nssv15119851|dbVar:nssv15121023|dbVar:nssv15121032|dbVar:nssv15121033|dbVar:nssv15121034|dbVar:nssv15121217|dbVar:nssv15121218|dbVar:nssv15121687|dbVar:nssv15122678|dbVar:nssv15123516|dbVar:nssv15124520|dbVar:nssv15127349|dbVar:nssv15130945|dbVar:nssv15131476|dbVar:nssv15131910|dbVar:nssv15132407|dbVar:nssv15132408|dbVar:nssv15132580|nssv15140019|dbVar:nssv15132953|dbVar:nssv15133489|dbVar:nssv15133490|dbVar:nssv15133634|dbVar:nssv15134794|dbVar:nssv15134826|dbVar:nssv15135086|dbVar:nssv15135107|dbVar:nssv15138367|dbVar:nssv15138802|dbVar:nssv15138941|dbVar:nssv15139309|dbVar:nssv15144315|dbVar:nssv15147286|dbVar:nssv15153560|dbVar:nssv15153562|dbVar:nssv15605891|dbVar:nssv15606061|dbVar:nssv15770186|dbVar:nssv15770321|dbVar:nssv16211870|dbVar:nssv16212102|dbVar:nssv16213046|dbVar:nssv16213271|dbVar:nssv16213451|dbVar:nssv16213572|dbVar:nssv16213637|dbVar:nssv16213802|dbVar:nssv16214176|dbVar:nssv16214333|dbVar:nssv16216714|dbVar:nssv16252200|dbVar:nssv16253953|dbVar:nssv16254938|dbVar:nssv16297119|dbVar:nssv16297131|dbVar:nssv16867405|dbVar:nssv17171362|dbVar:nssv17171376|dbVar:nssv17171391|dbVar:nssv17171923|dbVar:nssv17172168|dbVar:nssv17172572|dbVar:nssv17172573|dbVar:nssv17172574|dbVar:nssv17172955|dbVar:nssv17173143|dbVar:nssv17173159|dbVar:nssv17683620|dbVar:nssv17970729|dbVar:nssv17970732|dbVar:nssv17971217|dbVar:nssv17971266|dbVar:nssv17971361|dbVar:nssv17971686|dbVar:nssv17971734|dbVar:nssv17971799|dbVar:nssv17971904|dbVar:nssv17972056|dbVar:nssv17972166|dbVar:nssv17972432|dbVar:nssv17973718|nssv17974037|dbVar:nssv17973748|dbVar:nssv17974578|dbVar:nssv17975024|dbVar:nssv17976233|dbVar:nssv17976464|dbVar:nssv17976477|dbVar:nssv17976550|dbVar:nssv18326580|dbVar:nssv18786244|dbVar:nssv18786333|dbVar:nssv18787193|dbVar:nssv18788241|dbVar:nssv18788242|dbVar:nssv18788927|dbVar:nssv18788928|dbVar:nssv18790018|dbVar:nssv18790019|dbVar:nssv18790020|dbVar:nssv18790021|dbVar:nssv18790022|dbVar:nssv18790117|dbVar:nssv18790118|dbVar:nssv18790119|dbVar:nssv18790120|dbVar:nssv18790121|dbVar:nssv18790180|dbVar:nssv18790633|dbVar:nssv18791534|dbVar:nssv18791535|dbVar:nssv18791536|dbVar:nssv18791537|dbVar:nssv18791538|dbVar:nssv18791542|dbVar:nssv18830727|morbid:CPLX1|morbid:CTBP1|morbid:DOK7|morbid:EVC|morbid:EVC2|morbid:FGFR3|morbid:HMX1|morbid:HTRA3|morbid:HTT|morbid:IDUA|morbid:LETM1|morbid:LRPAP1|morbid:MAN2B2|morbid:MSX1|morbid:NSD2|morbid:PDE6B|morbid:PIGG|morbid:RNF212|morbid:SH3BP2|morbid:UVSSA|morbid:WFS1,.,.,.,.,.,.,.,.,dbVar:nssv17683620|dbVar:nssv17974578|dbVar:nssv17976464|dbVar:nssv17976477|dbVar:nssv18791534|dbVar:nssv18791536|dbVar:nssv18791537|dbVar:nssv18791538|morbid:PIGG,.,.,dbVar:nssv16213572|dbVar:nssv16213637|dbVar:nssv17171376|dbVar:nssv17171923|dbVar:nssv18788927|dbVar:nssv18788928|morbid:PDE6B,dbVar:nssv17171376,.,.,.,.,.,morbid:CPLX1,.,.,.,.,CLN:2672009|CLN:961843|dbVar:nssv16216714|dbVar:nssv18830727|morbid:IDUA,.,morbid:RNF212,.,.,.,.,.,.,.,.,morbid:UVSSA,.,.,.,.,.,morbid:FGFR3,morbid:LETM1,HI3:NSD2|morbid:NSD2,.,.,.,.,.,.,.,.,.,.,.,.,.,.,morbid:SH3BP2,.,.,.,.,.,.,morbid:HTT,.,.,.,CLN:2834164|CLN:3496433|dbVar:nssv15130945|dbVar:nssv15131476|dbVar:nssv15770186|dbVar:nssv16213451|dbVar:nssv16214333|dbVar:nssv17971686|dbVar:nssv17972166|dbVar:nssv17976550|dbVar:nssv18786333|dbVar:nssv18790180|morbid:DOK7,morbid:LRPAP1,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,HI3:MSX1|morbid:MSX1,.,.,.,.,dbVar:nssv15770321|dbVar:nssv16213046|dbVar:nssv16213271|dbVar:nssv16297119|dbVar:nssv17172955|dbVar:nssv17971266|dbVar:nssv17971361|dbVar:nssv17972056|dbVar:nssv18790018|dbVar:nssv18790020|dbVar:nssv18790021|dbVar:nssv18790022,CLN:1313135|dbVar:nssv15144315|dbVar:nssv16211870|dbVar:nssv16297131|dbVar:nssv17172168|dbVar:nssv17172572|dbVar:nssv17172573|dbVar:nssv17172574|dbVar:nssv17971734|dbVar:nssv17973718|nssv17974037|dbVar:nssv17975024|dbVar:nssv18786244|dbVar:nssv18790117|dbVar:nssv18790118|dbVar:nssv18790119|dbVar:nssv18790120|morbid:EVC,.,.,.,.,.,.,dbVar:nssv18790633|morbid:WFS1,.,morbid:MAN2B2,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,morbid:HTRA3,.,.,.,.,.,.,morbid:HMX1,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_coord=4:1087097-1107352|4:1190912-2255904|4:1205233-1244143|4:1228529-2862002|4:129754-9371067|4:1305803-2460571|4:1340996-1381837|4:1619776-2181192|4:1701019-1975031|4:1784695-1919793|4:1795020-1810594|4:1813206-1857883|4:1827029-1860753|4:1873121-1983919|4:1902353-1950545|4:1941634-3879802|4:1966267-5913899|4:2009467-3080412|4:2200252-5710240|4:2364202-5447465|4:2820541-2842823|4:2909441-6871516|4:3076408-3245687|4:3085428-7591673|4:331569-2010962|4:3465094-3495238|4:3465104-3465298|4:3475114-3491543|4:3478201-3482971|4:3478271-3491403|4:3486271-3496209|4:3487104-3487370|4:3487247-3495248|4:3487257-3487395|4:3487257-3495238|4:3494467-3495228|4:3494950-3495048|4:3495083-3495158|4:3505339-3534149|4:3776785-7361544|4:388345-3872380|4:4859066-4864603|4:4861392-4865663|4:4861393-4865663|4:4861628-6304195|4:492999-533989|4:493126-2065854|4:493126-663896|4:493126-998181|4:493969-499930|4:494166-494410|4:499508-502759|4:501175-533158|4:502599-509994|4:507006-2214932|4:509743-533158|4:512203-518547|4:520809-1020391|4:524206-527790|4:5563147-5711294|4:5564166-5711275|4:5564566-5578191|4:5564566-5586587|4:5564566-5759862|4:5564576-5567096|4:5565511-5811251|4:5570162-5570377|4:5576403-5576509|4:5617140-5812774|4:5630277-5633769|4:5630336-5635926|4:5630338-5635927|4:5636440-5710337|4:5642222-5642585|4:5682978-5735172|4:5690875-5691080|4:5690875-5696238|4:5696053-5696238|4:5710004-5750043|4:5711925-5817031|4:5712928-5816032|4:5713109-5714221|4:5713159-5713318|4:5731025-5759862|4:5733143-5735172|4:5749726-5755670|4:5754554-5755670|4:5754554-5758099|4:5754554-5785501|4:5754599-5758602|4:5785270-5812774|4:5795340-5795484|4:5795341-5795483|4:5798730-5798979|4:5798740-5798969|4:5803668-5806578|4:5809919-5811348|4:619417-619883|4:6271577-6304992|4:6279184-6279434|4:629670-670728|4:646966-664571|4:647642-648677|4:651220-652826|4:652722-656427|4:652742-656407|4:6576916-6625089|4:660321-661795|4:664193-671649|4:72448-2110334|4:72448-2327204|4:72448-2691306|4:72448-3208040|4:72448-3563382|4:72448-3725774|4:72448-3787112|4:72448-4360445|4:72448-4889835|4:72448-5036718|4:72448-5214111|4:72448-5346537|4:72448-6245152|4:72448-7831152|4:75743-8672411|4:778745-819917|4:78471-3364946|4:8271481-8308825|4:85041-1921232|4:85041-2010262|4:85041-4407509|4:85041-7065426|4:85041-7845343|4:8613755-8873340|4:8868774-8873565|4:980776-981040|4:980776-981747|4:990308-992083|4:990309-992082|4:993498-998345|4:994391-998355|4:996510-998192|4:996511-998191|4:996511-998355,.,.,.,.,.,.,.,.,4:492999-533989|4:493969-499930|4:494166-494410|4:499508-502759|4:501175-533158|4:502599-509994|4:509743-533158|4:512203-518547|4:524206-527790,.,.,4:619417-619883|4:646966-664571|4:647642-648677|4:651220-652826|4:652722-656427|4:652742-656407|4:660321-661795,4:647642-648677,.,.,.,.,.,4:778745-819917,.,.,.,.,4:990308-992083|4:990309-992082|4:993498-998345|4:996510-998192|4:996511-998191,.,4:1087097-1107352,.,.,.,.,.,.,.,.,4:1340996-1381837,.,.,.,.,.,4:1795020-1810594,4:1813206-1857883,4:1873121-1983919|4:1902353-1950545,.,.,.,.,.,.,.,.,.,.,.,.,.,.,4:2820541-2842823,.,.,.,.,.,.,4:3076408-3245687,.,.,.,4:3465094-3495238|4:3465104-3465298|4:3475114-3491543|4:3478201-3482971|4:3478271-3491403|4:3486271-3496209|4:3487104-3487370|4:3487247-3495248|4:3487257-3487395|4:3487257-3495238|4:3494467-3495228|4:3494950-3495048|4:3495083-3495158,4:3505339-3534149,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,4:4861392-4865663|4:4861393-4865663,.,.,.,.,4:5564566-5578191|4:5564566-5586587|4:5564576-5567096|4:5570162-5570377|4:5576403-5576509|4:5630277-5633769|4:5630336-5635926|4:5630338-5635927|4:5642222-5642585|4:5690875-5691080|4:5690875-5696238|4:5696053-5696238,4:5712928-5816032|4:5713109-5714221|4:5713159-5713318|4:5731025-5759862|4:5733143-5735172|4:5749726-5755670|4:5754554-5755670|4:5754554-5758099|4:5754554-5785501|4:5754599-5758602|4:5785270-5812774|4:5795340-5795484|4:5795341-5795483|4:5798730-5798979|4:5798740-5798969|4:5803668-5806578|4:5809919-5811348,.,.,.,.,.,.,4:6271577-6304992|4:6279184-6279434,.,4:6576916-6625089,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,4:8271481-8308825,.,.,.,.,.,.,4:8868774-8873565,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;po_P_gain_source=dbVar:nssv15165478|dbVar:nssv15148693|dbVar:nssv15149137|dbVar:nssv15125120|dbVar:nssv15134956|dbVar:nssv15136789|dbVar:nssv15148117|dbVar:nssv15165480|dbVar:nssv15164282|dbVar:nssv15164281|dbVar:nssv16215300|dbVar:nssv15145847|dbVar:nssv15132087|dbVar:nssv15132302|dbVar:nssv16254944|dbVar:nssv16207938|dbVar:nssv18830986|dbVar:nssv15150724|dbVar:nssv15777261|dbVar:nssv15151365|nssv18326348|dbVar:nssv15150634|dbVar:nssv15142189|dbVar:nssv15149870|nssv15151360|dbVar:nssv17649922|dbVar:nssv15147407|dbVar:nssv15146379|dbVar:nssv15146614|dbVar:nssv15148043|dbVar:nssv15146983|dbVar:nssv15146984|dbVar:nssv17976755|dbVar:nssv18841857|dbVar:nssv18841859|dbVar:nssv15164312|dbVar:nssv18841858|dbVar:nssv15149115;po_P_gain_coord=4:11526-191028879|4:12441-190904441|4:12441-49064044|4:33575-6632513|4:36425-1583294|4:36425-4098729|4:36425-47493612|4:49451-190915650|4:49451-190963766|4:49451-46339070|4:49451-49620898|4:51414-17799819|4:51414-3776843|4:51414-8224525|4:68346-2503033|4:68346-27423424|4:68346-34512694|4:68346-3713599|4:68346-4051616|4:68346-49089361|4:68346-66440622|4:68346-8731855|4:68347-190957473|4:69672-29702595|4:72448-21024037|4:72448-33132242|4:72448-39478764|4:78471-15627196|4:85041-22451641|4:85041-38701987|4:114785-47569569|4:507006-49064194|4:507006-57939396|4:1356925-49659859|4:2906395-42965249|4:6447049-20490737;po_P_gain_percent=4.87|4.87|18.96|99.42|97.73|99.14|19.60|4.87|4.87|20.09|18.76|52.40|99.46|99.75|99.87|34.00|27.00|99.91|99.92|18.97|14.01|99.96|4.87|31.38|44.38|28.13|23.60|59.76|41.52|24.05|19.51|18.25|15.43|16.59|16.14|20.82;po_P_loss_source=dbVar:nssv18330206|dbVar:nssv16254942|dbVar:nssv15140532|dbVar:nssv15129769|dbVar:nssv15124924|dbVar:nssv15139152|dbVar:nssv15136460|dbVar:nssv15138769|dbVar:nssv15136794|dbVar:nssv15139111|dbVar:nssv15145893|dbVar:nssv15145934|dbVar:nssv15134095|dbVar:nssv15147322|dbVar:nssv8639431|dbVar:nssv15164280|dbVar:nssv16208663|dbVar:nssv15123439|dbVar:nssv15135098|dbVar:nssv15146364|dbVar:nssv15121022|dbVar:nssv15119845|dbVar:nssv16207942|dbVar:nssv15151269|dbVar:nssv15149902|dbVar:nssv15146789|dbVar:nssv17976873|dbVar:nssv15151109|dbVar:nssv17957198|dbVar:nssv15137532|dbVar:nssv15148266|dbVar:nssv17956854|dbVar:nssv17976719|dbVar:nssv16254943|dbVar:nssv16207937|dbVar:nssv15152168|dbVar:nssv15141218|dbVar:nssv16254952|dbVar:nssv15150277|dbVar:nssv17976824|dbVar:nssv16254953|dbVar:nssv15139308|dbVar:nssv16207941|dbVar:nssv15138820|nssv16207940|dbVar:nssv16207939|dbVar:nssv18330137|dbVar:nssv18330792|dbVar:nssv17649921|dbVar:nssv15150501|dbVar:nssv15146961|dbVar:nssv15146716|dbVar:nssv15147405|dbVar:nssv15146665|dbVar:nssv15146669|dbVar:nssv15146272|dbVar:nssv15146661|dbVar:nssv15146276|dbVar:nssv15774427|dbVar:nssv15151369|dbVar:nssv15145981|dbVar:nssv16207944;po_P_loss_coord=4:2-12785001|4:2-1328868|4:29215-1925508|4:33575-2356516|4:33575-4534781|4:36425-1957819|4:36425-3267258|4:36425-3883057|4:36425-3975771|4:36425-7361544|4:36425-9371067|4:37337-15870679|4:37337-3776839|4:37337-9370984|4:44021-19796182|4:49451-2010397|4:49451-24280482|4:49451-8872474|4:51414-1399150|4:56773-14501384|4:56773-2214932|4:56773-3872380|4:68346-10312798|4:68346-10336032|4:68346-13770107|4:68346-14614077|4:68346-1512353|4:68346-15973383|4:68346-1675143|4:68346-1999185|4:68346-20387231|4:68346-20587167|4:68346-20964575|4:68346-2137211|4:68346-2786584|4:68346-3891984|4:68346-4044985|4:68346-5046326|4:68346-5319773|4:68346-5579467|4:68346-5831521|4:68346-6056753|4:68346-6984507|4:68346-8731855|4:68346-9768141|4:68347-12369983|4:68347-2437290|4:68599-18912995|4:71553-15302739|4:71553-29006745|4:72448-10252290|4:72448-12900236|4:72448-15659658|4:72448-17279636|4:72448-28067931|4:78471-10337237|4:85041-17488365|4:3374196-13468480|4:4165335-33324781|4:4428131-17462172|4:5914110-17264668;po_P_loss_percent=72.74|94.62|97.77|98.37|99.16|98.17|98.91|99.09|99.11|99.52|99.62|58.73|99.09|99.63|47.08|98.87|38.38|99.75|98.51|64.38|99.32|99.61|90.78|90.57|67.87|63.93|99.78|58.47|99.80|99.83|45.77|45.32|44.50|99.84|99.88|99.92|99.92|99.94|99.94|99.94|99.94|99.95|99.95|99.96|95.87|75.60|99.86|49.35|61.06|32.14|91.34|72.49|59.66|54.04|33.21|90.58|53.36|59.41|17.85|37.92|30.46;P_snvindel_nb=1051,.,.,.,.,.,.,.,.,61,.,.,96,12,.,.,.,.,.,1,.,.,.,21,213,.,.,.,.,.,.,1,1,.,.,2,.,.,.,.,.,39,.,32,.,.,.,.,.,.,.,.,.,.,.,.,.,.,8,.,.,.,.,.,.,4,.,.,.,76,2,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,12,.,.,.,.,199,161,.,.,.,1,.,.,142,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,1,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_snvindel_phen=4p_partial_monosomy_syndrome|Abnormality_of_the_nervous_system|Achondroplasia|Autosomal_dominant_nonsyndromic_hearing_loss|Autosomal_dominant_nonsyndromic_hearing_loss_6|Autosomal_recessive_retinitis_pigmentosa|BLOOD_GROUP,_EMM_SYSTEM|Bell-shaped_thorax|Bowed_humerus|Camptodactyly-tall_stature-scoliosis-hearing_loss_syndrome|Carcinoma_of_colon|Cataract_41|Cervical_cancer|Colorectal_cancer|Cone-rod_dystrophy|Congenital_Stationary_Night_Blindness,_Dominant|Congenital_myasthenic_syndrome|Congenital_myasthenic_syndrome_10|Congenital_stationary_night_blindness_autosomal_dominant_2|Connective_tissue_disorder|Coronal_craniosynostosis|Craniosynostosis_syndrome|Crouzon_syndrome|Crouzon_syndrome-acanthosis_nigricans_syndrome|Curry-Hall_syndrome|DOK7-related_disorder|Developmental_and_epileptic_encephalopathy,_63|Diabetes_mellitus|Disproportionate_short-limb_short_stature|EVC-related_disorder|EVC2-related_disorder|Ellis-van_Creveld_syndrome|Emm-null_phenotype|Epidermal_nevus|FGFR3-related_chondrodysplasia|FGFR3-related_disorder|Facial_asymmetry|Familial_hypokalemia-hypomagnesemia|Femoral_bowing|Fetal_akinesia_deformation_sequence_1|Fetal_akinesia_deformation_sequence_3|Fibrous_dysplasia_of_jaw|Generalized_non-motor_(absence)_seizure|Germ_cell_tumor_of_testis|Global_developmental_delay|Growth_delay|Hamartoma|Huntington_disease|Hurler_syndrome|Hypochondroplasia|Hypoplastic_enamel-onycholysis-hypohidrosis_syndrome|Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome|IDUA-related_core_myopathy|IDUA-related_disorder|Inborn_genetic_diseases|Infantile_axial_hypotonia|Intellectual_disability,_autosomal_recessive_53|Interstitial_pneumonitis|Isolated_microphthalmia_6|Jeune_thoracic_dystrophy|LADD_syndrome_1|Lacrimoauriculodentodigital_syndrome_2|Larsen_syndrome|Leber_congenital_amaurosis|Lethal_short-limbed_short_stature|Levy-Hollister_syndrome|Lower_limb_undergrowth|MSX1-related_disorder|Malignant_tumor_of_testis|Malignant_tumor_of_urinary_bladder|Meniere_disease|Mucopolysaccharidosis|Mucopolysaccharidosis,_MPS-I-H/S|Mucopolysaccharidosis,_MPS-I-S|Mucopolysaccharidosis,_MPS-IV-A|Mucopolysaccharidosis_type_1|Muenke_syndrome|Multiple_myeloma|Myopia_23,_autosomal_recessive|NSD2-related_disorder|Narrow_chest|Neurodevelopmental_delay|Nonsyndromic_genetic_hearing_loss|Optic_atrophy|PDE6B-related_disorder|PIGG-related_disorder|Rare_genetic_deafness|Rauch-Steindl_syndrome|Retinal_dystrophy|Retinitis_pigmentosa|Retinitis_pigmentosa_40|Rett_syndrome|SH3BP2-related_disorder|Saethre-Chotzen_syndrome|Seborrheic_keratosis|See_cases|Seizure|Severe_achondroplasia-developmental_delay-acanthosis_nigricans_syndrome|Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly|Short_ribs|Short_stature|Skeletal_dysplasia|Skeletal_dysplasia_with_acanthosis_nigricans|Small_for_gestational_age|Smith-Magenis_Syndrome-like|Spermatocytic_seminoma|Squamous_cell_lung_carcinoma|Syndromic_intellectual_disability|Thanatophoric_dysplasia|Thanatophoric_dysplasia,_type_2|Thanatophoric_dysplasia_type_1|Tooth_agenesis,_selective,_1|Type_2_diabetes_mellitus|Type_IV_short_rib_polydactyly_syndrome|Tyrosinase-positive_oculocutaneous_albinism|Unilateral_renal_agenesis|Upper_limb_undergrowth|WFS1-Related_Spectrum_Disorders|WFS1-related_disorder|WFS1-spectrum_disorder|Wolf-Hirschhorn_like_syndrome|Wolfram-like_syndrome|Wolfram_syndrome|Wolfram_syndrome_1|not_specified,.,.,.,.,.,.,.,.,BLOOD_GROUP,_EMM_SYSTEM|Emm-null_phenotype|Inborn_genetic_diseases|Intellectual_disability,_autosomal_recessive_53|PIGG-related_disorder,.,.,Autosomal_recessive_retinitis_pigmentosa|Cone-rod_dystrophy|Congenital_Stationary_Night_Blindness,_Dominant|Congenital_stationary_night_blindness_autosomal_dominant_2|Leber_congenital_amaurosis|PDE6B-related_disorder|Retinal_dystrophy|Retinitis_pigmentosa|Retinitis_pigmentosa_40|See_cases|Tyrosinase-positive_oculocutaneous_albinism,Autosomal_recessive_retinitis_pigmentosa|Congenital_stationary_night_blindness_autosomal_dominant_2|Leber_congenital_amaurosis|Retinal_dystrophy|Retinitis_pigmentosa|Retinitis_pigmentosa_40|See_cases,.,.,.,.,.,Developmental_and_epileptic_encephalopathy,_63,.,.,.,Hurler_syndrome|IDUA-related_disorder|Interstitial_pneumonitis|Mucopolysaccharidosis|Mucopolysaccharidosis,_MPS-I-H/S|Mucopolysaccharidosis,_MPS-I-S|Mucopolysaccharidosis_type_1|See_cases,Familial_hypokalemia-hypomagnesemia|Hurler_syndrome|IDUA-related_core_myopathy|IDUA-related_disorder|Inborn_genetic_diseases|Interstitial_pneumonitis|Mucopolysaccharidosis|Mucopolysaccharidosis,_MPS-I-H/S|Mucopolysaccharidosis,_MPS-I-S|Mucopolysaccharidosis,_MPS-IV-A|Mucopolysaccharidosis_type_1|See_cases,.,.,.,.,.,.,Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome|Inborn_genetic_diseases,Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome|Inborn_genetic_diseases,.,.,.,.,.,.,.,.,Abnormality_of_the_nervous_system|Achondroplasia|Bell-shaped_thorax|Bowed_humerus|Camptodactyly-tall_stature-scoliosis-hearing_loss_syndrome|Carcinoma_of_colon|Cervical_cancer|Colorectal_cancer|Connective_tissue_disorder|Coronal_craniosynostosis|Craniosynostosis_syndrome|Crouzon_syndrome|Crouzon_syndrome-acanthosis_nigricans_syndrome|Disproportionate_short-limb_short_stature|Epidermal_nevus|FGFR3-related_chondrodysplasia|FGFR3-related_disorder|Facial_asymmetry|Femoral_bowing|Generalized_non-motor_(absence)_seizure|Germ_cell_tumor_of_testis|Growth_delay|Hamartoma|Hypochondroplasia|Inborn_genetic_diseases|Infantile_axial_hypotonia|LADD_syndrome_1|Lacrimoauriculodentodigital_syndrome_2|Larsen_syndrome|Lethal_short-limbed_short_stature|Levy-Hollister_syndrome|Lower_limb_undergrowth|Malignant_tumor_of_testis|Malignant_tumor_of_urinary_bladder|Muenke_syndrome|Multiple_myeloma|Narrow_chest|Neurodevelopmental_delay|Saethre-Chotzen_syndrome|Seborrheic_keratosis|See_cases|Seizure|Severe_achondroplasia-developmental_delay-acanthosis_nigricans_syndrome|Short_ribs|Short_stature|Skeletal_dysplasia|Skeletal_dysplasia_with_acanthosis_nigricans|Small_for_gestational_age|Spermatocytic_seminoma|Squamous_cell_lung_carcinoma|Thanatophoric_dysplasia|Thanatophoric_dysplasia,_type_2|Thanatophoric_dysplasia_type_1|Unilateral_renal_agenesis|Upper_limb_undergrowth|not_specified,.,4p_partial_monosomy_syndrome|Global_developmental_delay|Inborn_genetic_diseases|NSD2-related_disorder|Neurodevelopmental_delay|Rauch-Steindl_syndrome|Syndromic_intellectual_disability|Wolf-Hirschhorn_like_syndrome,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Fibrous_dysplasia_of_jaw|SH3BP2-related_disorder,.,.,.,.,.,.,Huntington_disease,.,.,.,Congenital_myasthenic_syndrome|Congenital_myasthenic_syndrome_10|DOK7-related_disorder|Fetal_akinesia_deformation_sequence_1|Fetal_akinesia_deformation_sequence_3|Inborn_genetic_diseases|Rett_syndrome|See_cases,Myopia_23,_autosomal_recessive,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Hypoplastic_enamel-onycholysis-hypohidrosis_syndrome|MSX1-related_disorder|Tooth_agenesis,_selective,_1,.,.,.,.,Curry-Hall_syndrome|EVC2-related_disorder|Ellis-van_Creveld_syndrome|Inborn_genetic_diseases|Jeune_thoracic_dystrophy|Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly|Type_IV_short_rib_polydactyly_syndrome|not_specified,Curry-Hall_syndrome|EVC-related_disorder|Ellis-van_Creveld_syndrome|Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly,.,.,.,Smith-Magenis_Syndrome-like,.,.,Autosomal_dominant_nonsyndromic_hearing_loss|Autosomal_dominant_nonsyndromic_hearing_loss_6|Cataract_41|Diabetes_mellitus|Inborn_genetic_diseases|Meniere_disease|Nonsyndromic_genetic_hearing_loss|Optic_atrophy|Rare_genetic_deafness|Retinal_dystrophy|See_cases|Type_2_diabetes_mellitus|WFS1-Related_Spectrum_Disorders|WFS1-related_disorder|WFS1-spectrum_disorder|Wolfram-like_syndrome|Wolfram_syndrome|Wolfram_syndrome_1|not_specified,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Isolated_microphthalmia_6,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;B_gain_source=.,esv2763806,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|DDD:12919|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|DDD:12919|DDD:12922|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|DDD:12919|DDD:12922|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|DDD:12919|DDD:12922|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP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MID],.,.,.,26996948|28581210|28771251,.,.,12641462|17044014|19578023|20301590[PMID]|22334370|22968130|24265693|24760071|24938718|25472526|26667666|28559085|30646425|8075643|8075643[PMID]|8394174|8595886,.,.,.,.,.,.,11163241|26539891|28422131|28422131[PMID],.,.,.,24250268|27210743,11735025|21394825|21480867|22976768|23917744|8680403[PMID],.,25342176|31125047,.,.,.,.,.,12101226|26480814|27094857|28408745|28955726|30356033|31041561|32075774|36341169|9524128,.,.,22466610|22466610[PMID]_22466611[PMID]_22466612[PMID],.,.,.,.,.,10053006|10053006[PMID]_18076102[PMID]|10671061|10696568|10914960[PMID]|11406607|11467490|15909185|16441300|16501574|16501574[PMID]|17033969|17033969[PMID]_24864036[PMID]|18076102|18818193|194190|19449430|20301540[PMID]|20301588[PMID]_20301628[PMID]_21438135[PMID]|20301628[PMID]|20301650[PMID]_23149434[PMID]|21536014|23149434[PMID]|24864036|27139183|28249712|28483234|7493034|7670477|7773297|7847369|7913883|8078586|8630492|8640234|8845844|8880573|8880574|9042914|9279753|9300656|9450868|9580776,26960370|27287194|30378700|30773800|36055214,19483677|26633542|28600779|29760529|29892088|30244530|30345613|31171569|9618163,.,.,.,.,11310630|15328569|16802720|19807691|26511242,.,.,.,.,.,.,.,.,.,11381256|12900899|17147794|17321449|17368082|19038533|22153076|22153077|22640988|24382142|24916406|26064398|NULL,.,.,.,.,.,.,11264541|17181545[PMID]|20301482[PMID]_21566141[PMID]|248284|26740508|27329733|7550343|7618107|7774020|8401587|8458085,.,.,.,16794080|16917026|17439981|18626973|19261599|19261599[PMID]|20147321|20301347[PMID]|29395672|31453852|32360404,23830514|25525168,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,1054139|10742093|10815578|11369996|11369996[PMID]|12097313|15264286|16498076|26502894|4521949|8466837|8469557|8696335|9742121|NULL,.,.,.,.,16404586|17024374|17547743|19810119|19876929|225500|22616035|23220543|23220543[PMID]_22791528[PMID]_12571802[PMID]_12468274[PMID]|23220543[PMID]_22791528[PMID]_16404586[PMID],10700184|10700184[PMID]|17024374|23220543|23220543[PMID]_22791528[PMID]_19744229[PMID]_18947413[PMID]|26748586|29321360|30076350|7628126,.,.,.,.,.,.,11709537|11709538|12073007|12754709|12955714|16151413|16648378|16806192|16806192[PMID]_12913071[PMID]|17492394|18544103|20069065|20069065[PMID]_20301750[PMID]|20301607[PMID]_24148127[PMID]|21446023|21538838|21602428|222300|23531866|23531866[PMID]|243330|248846|251462|25250959|27395765|28802351|29529044|31313226|31555371|34014271|35018440|606201,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,18423520|18423520[PMID]_25574057[PMID]|19379485|25574057|29140751,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;NCBI_gene_ID=.,152687,255403,642280,654254,7700,693156,79963,170960,54872,112441426,.,5158,101928521,521,4636,84179,10336,100129917,10815,2580,84286,1609,10861,3425,53834,285498,.,.,10417,.,285463,1487,92070,10296,57654,54729,152877,7884,92305,10460,2261,3954,7468,677770,7469,100126332,401115,339983,353497,79441,10608,100616358,57732,402160,6047,8603,79155,6452,118,10227,317648,8602,2868,100750326,3064,345222,6002,3083,285489,4043,285492,100133461,152,348926,133060,85013,55646,166793,27065,53407,.,100507266,109623454,.,.,4487,.,54360,55351,10141,132884,2121,1400,100616201,389197,152789,.,285484,7466,5522,23324,93621,105374366,93622,339988,6286,114932,55330,9778,57533,.,257236,93624,80273,730971,57537,100616471,768239,100422826,84740,60312,.,84448,407052,54436,94031,105374374,8310,152992,27201,8532,.,3166,100287045,100287144,100287178,100287205,100287238,100288520,100287327,100287364,100287404,100287441,100287478,100287513,728369,728373,728379,728386,728393,728400,728405,391627,728419,391622;HGNC_gene_ID=.,HGNC:27196,HGNC:26889,HGNC:32472,HGNC:37138,HGNC:12926,HGNC:32827,HGNC:31,HGNC:29425,HGNC:25985,HGNC:53639,.,HGNC:8786,HGNC:40438,HGNC:846,HGNC:7586,HGNC:26177,HGNC:10066,HGNC:56108,HGNC:2309,HGNC:4113,HGNC:28709,HGNC:2856,HGNC:10993,HGNC:5391,HGNC:3693,HGNC:27729,.,.,HGNC:11253,.,HGNC:48337,HGNC:2494,HGNC:28307,HGNC:13731,HGNC:29304,HGNC:24975,HGNC:31860,HGNC:10904,HGNC:25137,HGNC:11524,HGNC:3690,HGNC:6556,HGNC:12766,HGNC:32580,HGNC:12768,HGNC:33689,HGNC:34437,HGNC:26742,HGNC:18870,HGNC:28719,HGNC:13906,HGNC:41877,HGNC:29334,HGNC:51180,HGNC:10067,HGNC:16822,HGNC:19118,HGNC:10825,HGNC:243,HGNC:16894,HGNC:20205,HGNC:16821,HGNC:4543,HGNC:37118,HGNC:4851,HGNC:33741,HGNC:9994,HGNC:4894,HGNC:26594,HGNC:6701,HGNC:26644,HGNC:53033,HGNC:283,HGNC:28017,HGNC:19656,HGNC:28201,HGNC:26021,HGNC:19883,HGNC:18790,HGNC:15942,.,HGNC:48877,HGNC:51876,.,.,HGNC:7391,.,HGNC:24435,HGNC:14217,HGNC:13716,HGNC:19747,HGNC:3497,HGNC:2365,HGNC:41550,HGNC:33766,HGNC:26460,.,HGNC:27728,HGNC:12762,HGNC:9306,HGNC:29623,HGNC:24549,HGNC:53458,HGNC:25109,HGNC:27958,HGNC:10504,HGNC:28796,HGNC:24206,HGNC:28992,HGNC:29246,.,HGNC:26900,HGNC:30781,HGNC:19696,HGNC:53379,HGNC:16698,HGNC:41616,HGNC:33131,HGNC:38194,HGNC:28141,HGNC:24017,.,HGNC:19195,HGNC:31647,HGNC:26009,HGNC:30406,HGNC:53506,HGNC:121,HGNC:26653,HGNC:4528,HGNC:2333,.,HGNC:5017,HGNC:43746,HGNC:44438,HGNC:44439,HGNC:444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4	69392546	.	T	<DEL>	.	PASS	AnnotSV_ID=4_69392546_69462438_DEL_1;SV_start=69392546;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=q13.2;Gene_name=UGT2B17;Closest_left=TMPRSS11E;Closest_right=UGT2B15;Gene_count=1;Tx=.,NM_001077;Tx_version=.,4;Tx_start=.,69402890;Tx_end=.,69442040;Overlapped_tx_length=.,39150;Overlapped_CDS_length=.,1593;Overlapped_CDS_percent=.,100;Frameshift=.,no;Exon_count=.,7;Location=.,txStart-txEnd;Location2=.,5'UTR-3'UTR;Intersect_start=.,69402890;Intersect_end=.,69442040;po_P_gain_source=dbVar:nssv15165478|dbVar:nssv15148693|dbVar:nssv15165480|dbVar:nssv15164282|dbVar:nssv15149870|nssv15151360|dbVar:nssv15145710|dbVar:nssv17956560|dbVar:nssv15153593|dbVar:nssv15774461;po_P_gain_coord=4:11526-191028879|4:12441-190904441|4:49451-190915650|4:49451-190963766|4:68347-190957473|4:52697789-98426769|4:52866945-143582507|4:64705502-73469716|4:68242785-82991431;po_P_gain_percent=0.04|0.04|0.04|0.04|0.04|0.15|0.08|0.80|0.47;po_P_loss_source=dbVar:nssv17173265|dbVar:nssv15165214|dbVar:nssv15125766|dbVar:nssv17969950|dbVar:nssv15141158|dbVar:nssv15132956|dbVar:nssv15132546|dbVar:nssv15137205|dbVar:nssv18830797|dbVar:nssv16207960;po_P_loss_coord=4:52757981-76930872|4:58332295-71587615|4:59167246-101910659|4:61867556-74711517|4:66017576-76772947|4:66320281-73179410|4:67708127-71697274|4:68665384-75106637|4:68698774-83637218|4:68950364-79738598;po_P_loss_percent=0.29|0.53|0.16|0.54|0.65|1.02|1.75|1.09|0.47|0.65;B_gain_source=DDD:13999|dgv1490e212|dgv5262n100|dgv5264n100;B_gain_coord=4:69360477-69485827|4:69364694-69524016|4:69371992-69489323|4:69371992-69540013;B_gain_AFmax=0.4178;B_loss_source=1000g|DDD:13999|DDD:14001|DDD:14006|IMH|dbVar|dgv5262n100|dgv951e199|esv2421501|esv3600874|esv3893940|gnomAD-SV_v2.1_DEL_4_46338|nsv514223;B_loss_coord=4:69364694-69524016|4:69367085-69542363|4:69371992-69489323|4:69372046-69491392|4:69373660-69491275|chr4:69373811-69491113|4:69373811-69491113|4:69374942-69503681|chr4:69375591-69491543|4:69375592-69491543|4:69375592-69491543|4:69380302-69491200|4:69382081-69512905|4:69386966-69483317;B_loss_AFmax=0.8518;B_inv_source=IMH;B_inv_coord=4:21758876-84442542|4:32219469-79170284;B_inv_AFmax=0.1946;po_B_gain_someG_source=4:69364694-69524016_DDD:13999|4:69371992-69489323_dgv5262n100|4:69435890-69485966_dgv1493e212|;po_B_gain_someG_coord=4:69360477-69485827_dgv1490e212|4:69366026-69430178_DDD:14000|4:69371992-69540013_dgv5264n100|4:69435890-69551731_dgv1495e212;po_B_loss_someG_source=4:69364694-69524016_DDD:13999|4:69367085-69542363_DDD:14001|4:69372046-69491392_dgv951e199|chr4:69373747-69423167_dbVar|4:69373748-69423167_esv3600873|4:69373811-69491113_gnomAD-SV_v2.1_DEL_4_46338|4:69374942-69503681_esv2421501|4:69375592-69491543_1000g|4:69380302-69491200_DDD:14006|4:69386966-69483317_nsv514223|4:69426440-69454553_1000g|4:69435890-69485966_dgv1494e212|chr4:69441908-69442050_dbVar|;po_B_loss_someG_coord=4:69360489-69396466_DDD:13998|4:69366026-69430178_DDD:14000|4:69371992-69489323_dgv5262n100|4:69373660-69491275_IMH|4:69373748-69423167_1000g|chr4:69373811-69491113_dbVar|4:69374942-69396466_DDD:14004|chr4:69375591-69491543_dbVar|4:69375592-69491543_esv3600874|4:69382081-69512905_esv3893940|chr4:69426439-69454553_dbVar|4:69426440-69454553_esv3600875|4:69435890-69558258_dgv1496e212|chr4:69446429-69446529_dbVar;GC_content_left=0.4;GC_content_right=0.365;Repeat_coord_left=4:69392108-69392544;Repeat_type_left=Tigger2a;Repeat_coord_right=4:69462528-69462751;Repeat_type_right=THE1B;SegDup_left=4:69370649-69435791;DDD_HI_percent=87.45;ExAC_synZ=0.741987855668132;ExAC_misZ=1.6951286981971;NCBI_gene_ID=.,7367;HGNC_gene_ID=.,HGNC:12547;OMIM_ID=601903;OMIM_phenotype=.,(Bone_mineral_density_QTL_12,_osteoporosis),_612560_(3);OMIM_morbid_candidate=yes;LOEUF_bin=5;GnomAD_pLI=9.6905e-08;ExAC_pLI=0.010256;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=69462438;SVLEN=-69893	GT	1/.
5	723195	.	G	<DUP>	.	PASS	AnnotSV_ID=5_723195_777000_DUP_1;SV_start=723195;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=p15.33;Gene_name=ZDHHC11B;Closest_left=TPPP;Closest_right=ZDHHC11;Gene_count=1;Tx=.,NM_001351303;Tx_version=.,2;Tx_start=.,710469;Tx_end=.,784844;Overlapped_tx_length=.,53806;Overlapped_CDS_length=.,1058;Overlapped_CDS_percent=.,94;Frameshift=.,yes;Exon_count=.,14;Location=.,intron1-intron12;Location2=.,5'UTR-CDS;Dist_nearest_SS=.,6214;Nearest_SS_type=.,3';Intersect_start=.,723194;Intersect_end=.,777000;RE_gene=NDUFS6_(morbid/RE=ABC_enhancer)|SDHA_(morbid/RE=EA_enhancer)|SLC9A3_(morbid/RE=GH_enhancer)|TRIP13_(morbid/RE=ABC_enhancer+EA_enhancer);po_P_gain_source=dbVar:nssv15164761|dbVar:nssv15125831|dbVar:nssv15146713|dbVar:nssv15139036|dbVar:nssv15136993|dbVar:nssv15145871|dbVar:nssv15147378|dbVar:nssv15147960|dbVar:nssv15146962|dbVar:nssv15147414|dbVar:nssv15164765|dbVar:nssv15164764|dbVar:nssv15149091|dbVar:nssv15147291|dbVar:nssv15146993|dbVar:nssv15146992|dbVar:nssv15150844|dbVar:nssv17976838|dbVar:nssv15153658|dbVar:nssv15151111|nssv15151221;po_P_gain_coord=5:13649-180905029|5:22150-10308848|5:22150-15851485|5:22150-1659250|5:22150-2324057|5:22150-23607162|5:22150-28075213|5:22150-33418294|5:22150-34041255|5:22150-73708550|5:25329-180693344|5:25329-18698028|5:25329-19661628|5:50094-46115086|5:54955-35680947|5:54955-45649963|5:113577-20240392|5:113577-29310520|5:113577-35739404|5:113578-180719789;po_P_gain_percent=0.03|0.52|0.34|3.29|2.34|0.23|0.19|0.16|0.16|0.07|0.03|0.29|0.27|0.12|0.15|0.12|0.27|0.18|0.15|0.03;po_P_loss_phen=5p15_terminal_(Cri_du_chat_syndrome)_region;po_P_loss_source=dbVar:nssv18330851|dbVar:nssv18841914|dbVar:nssv17649947|dbVar:nssv15147173|dbVar:nssv15145875|dbVar:nssv15147440|dbVar:nssv15146459|dbVar:nssv15146622|dbVar:nssv15147702|dbVar:nssv15136268|dbVar:nssv15146696|dbVar:nssv15145969|dbVar:nssv15151220|dbVar:nssv15132269|dbVar:nssv15148862|dbVar:nssv15148231|dbVar:nssv15147402|dbVar:nssv15146458|dbVar:nssv15149597|dbVar:nssv15147956|dbVar:nssv15148968|dbVar:nssv15148844|dbVar:nssv15146717|dbVar:nssv15148985|dbVar:nssv15148016|dbVar:nssv15148112|dbVar:nssv15145972|dbVar:nssv16866488|dbVar:nssv15140376|dbVar:nssv15148058|dbVar:nssv15148554|dbVar:nssv15132604|dbVar:nssv15134412|dbVar:nssv15147416|dbVar:nssv15140515|dbVar:nssv15135741|dbVar:nssv15141721|dbVar:nssv15138139|dbVar:nssv15139127|dbVar:nssv15139876|dbVar:nssv15134733|dbVar:nssv15142657|dbVar:nssv15141520|dbVar:nssv15147171|dbVar:nssv15150118|dbVar:nssv15146522|dbVar:nssv15164763|dbVar:nssv15150859|dbVar:nssv15166282|dbVar:nssv15132966|dbVar:nssv15132967|HI3:ISCA-37390|dbVar:nssv15146165|nssv15146815|dbVar:nssv15148064|dbVar:nssv15132680|dbVar:nssv15223218|dbVar:nssv15134417|dbVar:nssv16216549|dbVar:nssv15149121|dbVar:nssv15150161|dbVar:nssv15137858|dbVar:nssv15150229|dbVar:nssv15149886|dbVar:nssv16208009|dbVar:nssv17976839|dbVar:nssv15148942|dbVar:nssv16208008|dbVar:nssv15149911|dbVar:nssv15151402|dbVar:nssv15153655|dbVar:nssv15152885|dbVar:nssv15151403|dbVar:nssv18326313|dbVar:nssv15149508|dbVar:nssv16208007|dbVar:nssv15151241|dbVar:nssv15150601|dbVar:nssv15150625|dbVar:nssv17977082|dbVar:nssv15145995|dbVar:nssv15151861|dbVar:nssv16255066|dbVar:nssv16208006|dbVar:nssv16208011|dbVar:nssv15142295|dbVar:nssv16208010|dbVar:nssv15153656|dbVar:nssv15152886|dbVar:nssv15137538|dbVar:nssv15153657|dbVar:nssv17976724|dbVar:nssv15146000|dbVar:nssv17956677|dbVar:nssv18330187|dbVar:nssv18329119|dbVar:nssv18329189|dbVar:nssv15606071|dbVar:nssv15606072|dbVar:nssv16213555|dbVar:nssv16213990|dbVar:nssv18787102|dbVar:nssv18790308;po_P_loss_coord=5:2-32091038|5:10002-14320109|5:13201-4012072|5:22150-10044199|5:22150-11429370|5:22150-11530503|5:22150-12004203|5:22150-12820111|5:22150-13362684|5:22150-1429714|5:22150-16584684|5:22150-16930125|5:22150-17788806|5:22150-1826370|5:22150-21217229|5:22150-21726469|5:22150-22775404|5:22150-23132155|5:22150-24835567|5:22150-25699714|5:22150-26594000|5:22150-27188057|5:22150-27485726|5:22150-27611270|5:22150-27788723|5:22150-28429348|5:22150-28589299|5:22150-29048823|5:22150-2965987|5:22150-32248116|5:22150-34041196|5:22150-3404358|5:22150-3557056|5:22150-35831640|5:22150-4163847|5:22150-4260264|5:22150-4641409|5:22150-4833739|5:22150-5060009|5:22150-5102699|5:22150-6060215|5:22150-6112711|5:22150-6500967|5:22150-7213388|5:22150-9958240|5:22420-19281001|5:25329-18662625|5:25329-30672798|5:25329-31343671|5:37693-2747022|5:37693-2913319|5:37694-11347262|5:50094-15678560|5:50094-30112642|5:50094-4014761|5:52187-4163906|5:54955-5603514|5:71905-22078969|5:79147-15509107|5:79147-22152284|5:95244-5834664|5:113577-10163809|5:113577-10729838|5:113577-11767720|5:113577-12601027|5:113577-14684471|5:113577-14738180|5:113577-15291661|5:113577-15822225|5:113577-1708530|5:113577-1816055|5:113577-19167699|5:113577-2027194|5:113577-23047959|5:113577-23364376|5:113577-25091472|5:113577-26234903|5:113577-26948599|5:113577-30712376|5:113577-33998394|5:113577-4175855|5:113577-4305172|5:113577-4325585|5:113577-5194484|5:113577-5380741|5:113577-5657333|5:113577-5884399|5:113577-6125331|5:113577-6244090|5:113577-7946262|5:113577-8007018|5:113577-8876045|5:113578-16952167|5:113578-17654787|5:113578-26164852|5:113578-31448527|5:140475-26906925|5:140475-9792158|5:218462-1295161|5:218465-1297488|5:218472-1895829|5:482644-1895829;po_P_loss_percent=0.17|0.38|1.35|0.54|0.47|0.47|0.45|0.42|0.40|3.82|0.32|0.32|0.30|2.98|0.25|0.25|0.24|0.23|0.22|0.21|0.20|0.20|0.20|0.20|0.19|0.19|0.19|0.19|1.83|0.17|0.16|1.59|1.52|0.15|1.30|1.27|1.16|1.12|1.07|1.06|0.89|0.88|0.83|0.75|0.54|0.28|0.29|0.18|0.17|1.99|1.87|0.48|0.34|0.18|1.36|1.31|0.97|0.24|0.35|0.24|0.94|0.54|0.51|0.46|0.43|0.37|0.37|0.35|0.34|3.37|3.16|0.28|2.81|0.23|0.23|0.22|0.21|0.20|0.18|0.16|1.32|1.28|1.28|1.06|1.02|0.97|0.93|0.90|0.88|0.69|0.68|0.61|0.32|0.31|0.21|0.17|0.20|0.56|5.00|4.99|3.21|3.81;B_gain_source=DDD:16279|DDD:16284|dgv131e203;B_gain_coord=5:653582-875018|5:686604-840273|5:708603-865477;B_gain_AFmax=0.1231;B_loss_source=DDD:16279|DDD:16284|dgv1000e199|dgv131e203;B_loss_coord=5:653582-875018|5:682475-788359|5:686604-840273|5:708603-865477;B_loss_AFmax=0.0497;B_inv_source=IMH;B_inv_coord=5:238915-1591166|5:244073-1583559|5:244336-1583852|5:261961-1570436;B_inv_AFmax=0.2771;po_B_gain_someG_source=5:686604-840273_DDD:16279|5:714989-733938_1000g|5:714989-733938_1000g|5:717638-748444_DDD:16285|5:757677-778933_1000g|5:757677-778933_1000g|5:763398-838450_DDD:16291;po_B_gain_someG_coord=5:653582-875018_dgv131e203|5:708603-865477_DDD:16284|5:714989-733938_1000g|5:714989-733938_dgv1061e214|5:754104-754760_IMH|5:757677-778933_1000g|5:757677-778933_dgv1062e214;po_B_loss_someG_source=5:682475-788359_dgv1000e199|5:708603-865477_DDD:16284|5:714989-733938_1000g|chr5:724284-724491_dbVar|5:747151-776399_DDD:16288|chr5:757676-778933_dbVar|5:757677-778933_esv3603772|chr5:764454-764539_dbVar|;po_B_loss_someG_coord=5:653582-875018_dgv131e203|5:686604-840273_DDD:16279|chr5:714988-733938_dbVar|5:714989-733938_esv3603766|chr5:725960-726319_dbVar|5:747846-753492_esv2673755|5:757677-778933_1000g|5:763398-838450_DDD:16291|chr5:774523-774617_dbVar;GC_content_left=0.395;GC_content_right=0.58;Repeat_coord_left=5:721917-723166;Repeat_type_left=L1ME3F;SegDup_left=5:686123-731394;SegDup_right=5:770128-777143;DDD_HI_percent=98.37;ExAC_synZ=0.535222227518795;ExAC_misZ=-0.0274451648003615;NCBI_gene_ID=.,653082;HGNC_gene_ID=.,HGNC:32962;LOEUF_bin=8;GnomAD_pLI=3.6787e-13;ExAC_pLI=0.043228;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2E_(cf_B_gain_source,_+0.00)|2L_(ZDHHC11B,_+0.00)|3A_(1_gene,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=3,full=3;END=777000;SVLEN=53806	GT	1/.
5	88774329	.	T	<DEL>	.	PASS	AnnotSV_ID=5_88774329_91802402_DEL_1;SV_start=88774329;Biologist_annotation=TAD_MEF2C;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=q14.3;Gene_name=LOC102724637|MIR3660|LINC01339|CETN3|LOC731157|MBLAC2|POLR3G|LYSMD3|ADGRV1|LUCAT1|ARRDC3|ARRDC3-AS1,LOC102724637,MIR3660,LINC01339,CETN3,LOC731157,MBLAC2,POLR3G,LYSMD3,ADGRV1,LUCAT1,ARRDC3,ARRDC3-AS1;Closest_left=MEF2C-AS1;Closest_right=LOC105379082;Gene_count=12;Tx=.,NR_188242,NR_037433,NR_120601,NM_001297765,NR_105024,NM_203406,NM_001370354,NM_198273,NM_032119,NR_103548,NM_020801,NR_027435;Tx_version=.,1,1,1,2,1,2,1,2,4,1,4,1;Tx_start=.,89198108,89312437,89454155,89688073,89705816,89754025,89769745,89811442,89854613,90598802,90664447,90676163;Tx_end=.,89269817,89312537,89585888,89705573,89706486,89770588,89810374,89825401,90460254,90610219,90679134,90716532;Overlapped_tx_length=.,71709,100,131733,17500,670,16563,40629,13959,605641,11417,14687,40369;Overlapped_CDS_length=.,0,0,0,576,0,840,672,921,18921,0,1245,0;Overlapped_CDS_percent=.,0,0,0,100,0,100,100,100,100,0,100,0;Frameshift=.,.,.,.,no,.,no,no,no,no,.,no,.;Exon_count=.,6,1,6,6,2,2,8,3,90,5,8,3;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR;Intersect_start=.,89198108,89312437,89454155,89688073,89705816,89754025,89769745,89811442,89854613,90598802,90664447,90676163;Intersect_end=.,89269817,89312537,89585888,89705573,89706486,89770588,89810374,89825401,90460254,90610219,90679134,90716532;RE_gene=AGO2_(morbid/RE=mTL_miRNA)|B4GALNT1_(morbid/RE=mTL_miRNA)|CEP57_(morbid/RE=mTL_miRNA)|EPHA2_(morbid/RE=mTL_miRNA)|GFPT1_(morbid/RE=mTL_miRNA)|GPSM2_(morbid/RE=mTL_miRNA)|KDM6A_(HI=3/morbid/RE=mTL_miRNA)|KMT2A_(HI=3/morbid/RE=mTL_miRNA)|MEF2C_(HI=3/morbid/RE=ABC_enhancer+GH_enhancer+GH_promoter)|MSX2_(morbid/RE=mTL_miRNA)|NODAL_(morbid/RE=mTL_miRNA)|NR2F1_(HI=3/morbid/RE=ABC_enhancer)|PIGS_(morbid/RE=mTL_miRNA)|PLEKHM1_(morbid/RE=mTL_miRNA)|PPP1R15B_(morbid/RE=mTL_miRNA)|PRKACB_(morbid/RE=mTL_miRNA)|SELENOI_(morbid/RE=mTL_miRNA);P_gain_source=dbVar:nssv17172150|dbVar:nssv17172151|dbVar:nssv17974002|dbVar:nssv17974003|dbVar:nssv17976802,.,.,.,.,.,.,.,.,dbVar:nssv17172150|dbVar:nssv17172151|dbVar:nssv17974002|dbVar:nssv17974003|dbVar:nssv17976802,.,.,.;P_gain_coord=5:89920928-89923613|5:89938434-89948400|5:89938454-89949769|5:90136804-90261231|5:90144435-90159694,.,.,.,.,.,.,.,.,5:89920928-89923613|5:89938434-89948400|5:89938454-89949769|5:90136804-90261231|5:90144435-90159694,.,.,.;P_loss_phen=?Febrile_seizures,_familial,_4,_604352_(3)_AD|Usher_syndrome,_type_2C,_605472_(3)_Digenic_dominant,AR|Usher_syndrome,_type_2C,_GPR98|PDZD7_digenic,_605472_(3)_Digenic_dominant,AR|Usher_syndrome_type_2C,.,.,.,.,.,.,.,.,?Febrile_seizures,_familial,_4,_604352_(3)_AD|Usher_syndrome,_type_2C,_605472_(3)_Digenic_dominant,AR|Usher_syndrome,_type_2C,_GPR98|PDZD7_digenic,_605472_(3)_Digenic_dominant,AR,.,.,.;P_loss_source=CLN:2419348|CLN:3786833|dbVar:nssv15120153|dbVar:nssv15132320|dbVar:nssv15222969|dbVar:nssv15771046|dbVar:nssv15772847|nssv15776039|dbVar:nssv15774334|dbVar:nssv16211859|dbVar:nssv17171561|dbVar:nssv17955830|dbVar:nssv17955831|dbVar:nssv17970856|dbVar:nssv17971694|dbVar:nssv17972093|dbVar:nssv17972414|dbVar:nssv17974150|dbVar:nssv17975051|dbVar:nssv17976597|dbVar:nssv18787826|dbVar:nssv18787827|dbVar:nssv18787828|dbVar:nssv18787829|dbVar:nssv18787830|dbVar:nssv18787831|dbVar:nssv18787832|dbVar:nssv18787833|dbVar:nssv18787834|dbVar:nssv18792626|dbVar:nssv8639335|dbVar:nssv8639887|morbid:ADGRV1,.,.,.,.,.,.,.,.,CLN:3786833|dbVar:nssv15120153|dbVar:nssv15222969|dbVar:nssv15771046|dbVar:nssv15772847|nssv15776039|dbVar:nssv15774334|dbVar:nssv17171561|dbVar:nssv17955830|dbVar:nssv17955831|dbVar:nssv17970856|dbVar:nssv17971694|dbVar:nssv17972093|dbVar:nssv17972414|dbVar:nssv17974150|dbVar:nssv17975051|dbVar:nssv17976597|dbVar:nssv18787826|dbVar:nssv18787827|dbVar:nssv18787828|dbVar:nssv18787829|dbVar:nssv18787830|dbVar:nssv18787831|dbVar:nssv18787832|dbVar:nssv18787833|dbVar:nssv18787834|dbVar:nssv8639335|dbVar:nssv8639887|morbid:ADGRV1,.,.,.;P_loss_coord=5:89414155-89415062|5:89414156-89415061|5:89523964-90412409|5:89854614-90460254|5:89854714-90459717|5:89910547-90079868|5:89910633-90002231|5:89915000-89968362|5:89918395-90059306|5:89930912-90079894|5:89940238-89999954|5:89940504-89986878|5:89940571-89940765|5:89953703-89954115|5:89953723-89954095|5:89969852-89975466|5:89988605-90077246|5:89989688-90000325|5:89990520-90136394|5:89992735-90125023|5:89999463-89999632|5:90015866-90016040|5:90046349-90049666|5:90112103-90219415|5:90119223-90151738|5:90150020-90159573|5:90151539-90151738|5:90221275-90357290|5:90261233-90678909|5:90261287-90261361|5:90368245-90398177|5:90368250-90459732,.,.,.,.,.,.,.,.,5:89854614-90460254|5:89854714-90459717|5:89910547-90079868|5:89910633-90002231|5:89915000-89968362|5:89918395-90059306|5:89930912-90079894|5:89940238-89999954|5:89940504-89986878|5:89940571-89940765|5:89953703-89954115|5:89953723-89954095|5:89969852-89975466|5:89988605-90077246|5:89989688-90000325|5:89990520-90136394|5:89992735-90125023|5:89999463-89999632|5:90015866-90016040|5:90046349-90049666|5:90112103-90219415|5:90119223-90151738|5:90150020-90159573|5:90151539-90151738|5:90221275-90357290|5:90261287-90261361|5:90368245-90398177|5:90368250-90459732,.,.,.;P_ins_source=CLN:1393621|CLN:1447486|CLN:3819107|dbVar:nssv17971430|dbVar:nssv17974885,.,.,.,.,.,.,.,.,CLN:1393621|CLN:1447486|CLN:3819107|dbVar:nssv17971430|dbVar:nssv17974885,.,.,.;P_ins_coord=5:89949103-89949102|5:89949103-89949236|5:89990260-89990259|5:89990260-89990371|5:90024639-90024756,.,.,.,.,.,.,.,.,5:89949103-89949102|5:89949103-89949236|5:89990260-89990259|5:89990260-89990371|5:90024639-90024756,.,.,.;po_P_gain_source=dbVar:nssv15164761|dbVar:nssv15164765|dbVar:nssv15151111|nssv15151221|dbVar:nssv16206767|dbVar:nssv15120567|dbVar:nssv15132159|dbVar:nssv15142272|dbVar:nssv15151420|dbVar:nssv15135062|dbVar:nssv16207624|dbVar:nssv15776426;po_P_gain_coord=5:13649-180905029|5:25329-180693344|5:113578-180719789|5:72790062-97478870|5:73459012-110145153|5:86420656-92718726|5:86621338-89204392|5:87399002-92675748|5:87493550-92528869|5:87792845-109221844|5:89949119-129317455;po_P_gain_percent=1.67|1.68|1.68|12.26|8.25|48.08|16.65|57.39|60.14|14.13|4.71;po_P_loss_source=dbVar:nssv15151179|dbVar:nssv17970035|dbVar:nssv15138006|dbVar:nssv15127576|dbVar:nssv15120741|dbVar:nssv15122759|dbVar:nssv15143209|nssv17976344|dbVar:nssv15133640|dbVar:nssv15140345|dbVar:nssv15132311|dbVar:nssv18841850|dbVar:nssv15167313|dbVar:nssv15121450|dbVar:nssv15142367|dbVar:nssv15132971|dbVar:nssv15133836|dbVar:nssv15121948|dbVar:nssv15132637|dbVar:nssv15121951|dbVar:nssv15138054|dbVar:nssv15120743|dbVar:nssv15139660|dbVar:nssv8639414|dbVar:nssv15138098|dbVar:nssv15152898;po_P_loss_coord=5:17628742-176575720|5:82185952-90110454|5:83899399-110770779|5:85045626-89302638|5:86039541-91633081|5:86062777-91444662|5:86400001-154000000|5:86487716-89253266|5:86530416-88893604|5:86672701-100860147|5:87485354-93120303|5:87512315-95096562|5:87664107-91698938|5:87764486-90147447|5:88016215-88783092|5:88062498-89028098|5:88232588-93437723|5:88348148-88783092|5:88377170-104022949|5:89670424-127412115|5:90682370-97701584|5:90707526-130655256|5:91064111-93896378|5:91327087-93283043|5:91504102-104858348;po_P_loss_percent=1.91|16.86|11.27|12.41|51.11|49.62|4.48|17.32|5.05|21.34|53.74|39.93|72.48|57.62|1.14|26.28|58.17|2.01|19.35|5.65|15.96|2.74|26.07|24.30|2.23;P_snvindel_nb=435,.,.,.,.,.,.,.,.,435,.,.,.;P_snvindel_phen=ADGRV1-related_disorder|Autosomal_recessive_sensorineural_hearing_loss|Ear_malformation|Febrile_seizures,_familial,_4|Hearing_impairment|Hearing_loss,_autosomal_recessive|Rare_genetic_deafness|Retinal_dystrophy|Usher_syndrome|Usher_syndrome_type_2|Usher_syndrome_type_2A|Usher_syndrome_type_2C,.,.,.,.,.,.,.,.,ADGRV1-related_disorder|Autosomal_recessive_sensorineural_hearing_loss|Ear_malformation|Febrile_seizures,_familial,_4|Hearing_impairment|Hearing_loss,_autosomal_recessive|Rare_genetic_deafness|Retinal_dystrophy|Usher_syndrome|Usher_syndrome_type_2|Usher_syndrome_type_2A|Usher_syndrome_type_2C,.,.,.;B_inv_source=IMH;B_inv_coord=5:24758285-101693420|5:28691217-97582419|5:84488955-162334467;B_inv_AFmax=0.5483;po_B_gain_someG_source=5:89788663-89788952_IMH|5:90866987-90867072_gnomAD-SV_v2.1_DUP_5_15730;po_B_gain_someG_coord=5:89264627-89264683_gnomAD-SV_v2.1_DUP_5_15710|5:89860422-89860742_1000g;po_B_loss_someG_source=chr5:88806361-88806411_dbVar|chr5:88831687-88837255_dbVar|chr5:89003565-89004043_dbVar|chr5:89003715-89004039_dbVar|5:89003716-89004039_esv3605750|5:89003721-89004043_esv2657768|chr5:89029798-89029893_dbVar|chr5:89045213-89045498_dbVar|chr5:89047323-89047872_dbVar|chr5:89067203-89083487_dbVar|chr5:89101197-89101273_dbVar|chr5:89113277-89114892_dbVar|chr5:89131325-89131385_dbVar|chr5:89209000-89239000_dbVar|chr5:89257321-89262348_dbVar|chr5:89359000-89373000_dbVar|chr5:89388378-89389723_dbVar|chr5:89436013-89437273_dbVar|chr5:89563059-89564683_dbVar|chr5:89578750-89579142_dbVar...;po_B_loss_someG_coord=chr5:88803653-88817310_dbVar|chr5:88824732-88824785_dbVar|chr5:88832512-88834519_dbVar|5:89003565-89004043_gnomAD-SV_v2.1_DEL_5_59965|5:89003716-89004039_1000g|5:89003721-89004043_IMH|chr5:89018000-89031000_dbVar|chr5:89039679-89039840_dbVar|chr5:89047322-89047872_dbVar|chr5:89052853-89052953_dbVar|chr5:89084915-89086582_dbVar|chr5:89112611-89115172_dbVar|chr5:89124435-89124505_dbVar|chr5:89171348-89171401_dbVar|chr5:89234368-89234446_dbVar|chr5:89299879-89302011_dbVar|chr5:89388306-89389753_dbVar|chr5:89407162-89407215_dbVar|chr5:89471562-89472013_dbVar|chr5:89574182-89585732_dbVar...;GC_content_left=0.335;GC_content_right=0.275;Repeat_coord_right=5:91802185-91802338;Repeat_type_right=L2a;HI=.,.,.,.,.,.,.,.,.,30,.,.,.;TS=.,.,.,.,.,.,.,.,.,0,.,.,.;DDD_HI_percent=38.97,.,.,.,5.94,.,38.68,38.97,28.58,25.58,.,10.63,.;ExAC_delZ=0.855259196084686,.,.,.,0.855259196084686,.,-0.0315707309390069,0.478729015674934,.,.,.,0.745040589608255,.;ExAC_dupZ=1.02927857149332,.,.,.,1.02927857149332,.,0.414676882744812,0.798950378312061,.,.,.,1.00834122048279,.;ExAC_cnvZ=1.26063232799998,.,.,.,1.26063232799998,.,0.420940108293089,0.929744998199481,.,.,.,1.19108832249232,.;ExAC_synZ=1.13380694792028,.,.,.,-1.0886019180172,.,1.13380694792028,0.494543657071353,0.0616099264393714,.,.,0.196967347879621,.;ExAC_misZ=1.83366808117122,.,.,.,0.322004765294048,.,0.9911283716698,-0.512733755306802,-0.398837217747125,.,.,1.83366808117122,.;GenCC_disease=.,.,.,.,.,.,.,.,.,Usher_syndrome_type_2|Usher_syndrome_type_2C|febrile_seizures,_familial,_4|nonsyndromic_genetic_hearing_loss,.,.,.;GenCC_moi=.,.,.,.,.,.,.,.,.,AD|AR,.,.,.;GenCC_classification=.,.,.,.,.,.,.,.,.,Definitive|Disputed_Evidence|Limited|Strong|Supportive,.,.,.;GenCC_pmid=.,.,.,.,.,.,.,.,.,14740321|16775142|19357116|19357117|20301515[PMID]|22135276|22147658|23441107|25572244|280396,.,.,.;NCBI_gene_ID=.,.,100500825,101929495,1070,.,153364,10622,116068,84059,100505994,57561,100129716;HGNC_gene_ID=.,.,HGNC:38985,HGNC:50549,HGNC:1868,.,HGNC:33711,HGNC:30075,HGNC:26969,HGNC:17416,HGNC:48498,HGNC:29263,HGNC:44145;OMIM_ID=602851,.,.,.,.,.,.,.,.,602851,.,.,.;OMIM_phenotype=.,.,.,.,.,.,.,.,.,?Febrile_seizures,_familial,_4,_604352_(3)_AD|Usher_syndrome,_type_2C,_605472_(3)_Digenic_dominant,AR|Usher_syndrome,_type_2C,_GPR98/PDZD7_digenic,_605472_(3)_Digenic_dominant,AR,.,.,.;OMIM_inheritance=.,.,.,.,.,.,.,.,.,AD|Digenic_dominant,AR,.,.,.;OMIM_morbid=yes,.,.,.,.,.,.,.,.,yes,.,.,.;OMIM_morbid_candidate=yes,.,.,.,.,.,.,.,.,yes,.,.,.;LOEUF_bin=1,.,.,.,7,.,7,8,3,.,.,1,.;GnomAD_pLI=0.98715,.,.,.,0.00010528,.,4.5418e-05,1.7611e-10,0.30382,.,.,0.98715,.;ExAC_pLI=0.97875,.,.,.,0.011321,.,0.0002801,6.4276e-05,0.77182,.,.,0.97875,.;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(12_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=91802402;SVLEN=-3028074	GT	1/.
6	266080	.	C	<DEL>	.	PASS	AnnotSV_ID=6_266080_362290_DEL_1;SV_start=266080;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=p25.3;Gene_name=DUSP22;Closest_left=LINC03066;Closest_right=IRF4;Gene_count=1;Tx=.,NM_001286555;Tx_version=.,3;Tx_start=.,292486;Tx_end=.,351355;Overlapped_tx_length=.,58869;Overlapped_CDS_length=.,618;Overlapped_CDS_percent=.,100;Frameshift=.,no;Exon_count=.,7;Location=.,txStart-txEnd;Location2=.,5'UTR-3'UTR;Intersect_start=.,292486;Intersect_end=.,351355;RE_gene=EXOC2_(morbid/RE=ABC_enhancer+EA_enhancer+GH_promoter_enhancer)|FOXC1_(HI=3/morbid/RE=ABC_enhancer)|IRF4_(morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer);po_P_gain_source=dbVar:nssv15166690|dbVar:nssv15132417|dbVar:nssv15166692|dbVar:nssv15120571|dbVar:nssv17649861|dbVar:nssv15138806|dbVar:nssv15150238|dbVar:nssv15136852|dbVar:nssv15137715|dbVar:nssv15139508|dbVar:nssv15139953|dbVar:nssv15154408|dbVar:nssv15154409|dbVar:nssv15772668|dbVar:nssv15161578|dbVar:nssv15161859|nssv15161868|dbVar:nssv15132517|dbVar:nssv15133942|dbVar:nssv15135449|dbVar:nssv15131978|dbVar:nssv15168255|dbVar:nssv15124407|nssv15153178|dbVar:nssv15124483|dbVar:nssv16255328;po_P_gain_coord=6:60108-171054786|6:106432-18360826|6:108667-170980171|6:144958-5239414|6:149620-3951208|6:152635-14417234|6:152635-15732394|6:152635-6027780|6:155808-17058645|6:156975-11551050|6:156975-13081433|6:156975-13502033|6:156975-21955964|6:156975-23221621|6:156975-46757028|6:156976-170919482|6:163084-1951585|6:163084-2029765|6:163084-9525729|6:164361-13340113|6:165633-170919470|6:168776-24023234|6:255351-3189972|6:302184-3290583;po_P_gain_percent=0.06|0.53|0.06|1.89|2.53|0.67|0.62|1.64|0.57|0.84|0.74|0.72|0.44|0.42|0.21|0.06|5.38|5.15|1.03|0.73|0.06|0.40|3.28|2.01;po_P_loss_source=dbVar:nssv15127418|dbVar:nssv15133557|dbVar:nssv15168254|dbVar:nssv15134981|dbVar:nssv15135893|dbVar:nssv15139184|dbVar:nssv16254736|dbVar:nssv15139679|dbVar:nssv15151182|dbVar:nssv16208808|dbVar:nssv15152915|dbVar:nssv15137052|dbVar:nssv15142299|dbVar:nssv15138353|dbVar:nssv18330309|dbVar:nssv15133558|dbVar:nssv15134713|dbVar:nssv15132439|dbVar:nssv15132039|dbVar:nssv15133559|dbVar:nssv15132182|dbVar:nssv15132440|dbVar:nssv15137716|dbVar:nssv15125242|dbVar:nssv15141126|dbVar:nssv15124398|dbVar:nssv15124411;po_P_loss_coord=6:60524-1768235|6:107683-4979015|6:108667-1505511|6:152635-5315912|6:152635-6027780|6:152635-6290037|6:152850-1888703|6:156975-13856156|6:156975-2030623|6:156975-2208360|6:156975-3398920|6:156975-4907926|6:156975-6417749|6:156975-7122992|6:156976-3718881|6:163084-2724845|6:163084-3459841|6:163084-5875635|6:163084-6063033|6:164634-5823834|6:164634-6284470|6:165676-9036267|6:170427-1622218|6:180960-2180143|6:195230-2117379|6:204010-11608587|6:204010-6447311;po_P_loss_percent=5.63|1.98|6.89|1.86|1.64|1.57|5.54|0.70|5.13|4.69|2.97|2.03|1.54|1.38|2.70|3.76|2.92|1.68|1.63|1.70|1.57|1.08|6.63|4.81|5.01|0.84|1.54;B_gain_source=DDD:19553|DDD:19555|dgv140e203|nsv514340;B_gain_coord=6:230528-373346|6:236002-373603|6:257333-380527|6:257354-382897;B_gain_AFmax=0.6839;B_loss_source=DDD:19555|dbVar|dgv1701e212;B_loss_coord=chr6:180946-734275|6:236002-373603|6:254255-385771;B_loss_AFmax=0.187;po_B_gain_someG_source=6:236002-373603_DDD:19555|6:253364-302293_dgv1695e212|6:256503-293373_dgv1157e214|6:257354-293393_DDD:19561|6:257354-382897_dgv140e203|6:294125-385771_dgv1705e212|6:305182-340601_1000g|6:305182-340601_dgv1158e214|6:327587-368712_1000g|6:344136-379149_DDD:19570;po_B_gain_someG_coord=6:230528-373346_DDD:19553|6:253364-294911_dgv1694e212|6:256503-293373_1000g|6:257333-380527_nsv514340|6:257354-294837_esv2421434|6:259529-339802_TS40:ISCA-37471|6:298701-379015_esv2421645|6:305182-340601_1000g|6:327587-368712_1000g|6:327587-368712_dgv1159e214;po_B_loss_someG_source=6:236002-373603_DDD:19555|6:254255-385771_dgv1701e212|chr6:295586-296060_dbVar|chr6:295710-295782_dbVar|chr6:314312-314882_dbVar|chr6:340942-340994_dbVar|;po_B_loss_someG_coord=chr6:180946-734275_dbVar|6:252694-302294_dgv1693e212|6:259529-339802_HI40:ISCA-37471|6:295586-296060_gnomAD-SV_v2.1_DEL_6_65910|chr6:299088-299161_dbVar|chr6:329960-330054_dbVar|chr6:340943-340994_dbVar;GC_content_left=0.365;GC_content_right=0.315;Repeat_coord_left=6:266156-266836;Repeat_type_left=L1MC3;Repeat_coord_right=6:362320-362381;Repeat_type_right=MIRc;ENCODE_blacklist_left=6:256601-382800;ENCODE_blacklist_characteristics_left=High_Signal_Region;ENCODE_blacklist_right=6:256601-382800;ENCODE_blacklist_characteristics_right=High_Signal_Region;DDD_HI_percent=38.68;ExAC_synZ=-1.35330421932959;ExAC_misZ=-0.982727799381157;NCBI_gene_ID=.,56940;HGNC_gene_ID=.,HGNC:16077;LOEUF_bin=5;GnomAD_pLI=0.0093421;ExAC_pLI=0.0043071;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=362290;SVLEN=-96211	GT	1/.
6	29854871	.	G	<DEL>	.	PASS	AnnotSV_ID=6_29854871_29896710_DEL_1;SV_start=29854871;Biologist_ranking=Benign;Annotation_mode=full,split,split;CytoBand=p22.1;Gene_name=HLA-H|HCG4B,HLA-H,HCG4B;Closest_left=HCP5B;Closest_right=HLA-A;Gene_count=2;Tx=.,NR_001434,NR_001317;Tx_version=.,4,3;Tx_start=.,29855349,29892368;Tx_end=.,29858856,29894992;Overlapped_tx_length=.,3507,2624;Overlapped_CDS_length=.,0,0;Overlapped_CDS_percent=.,0,0;Exon_count=.,8,1;Location=.,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR;Intersect_start=.,29855349,29892368;Intersect_end=.,29858856,29894992;RE_gene=GABBR1_(morbid/RE=EA_enhancer)|ZFP57_(morbid/RE=EA_enhancer+GH_enhancer+GH_promoter_enhancer);P_loss_source=morbid:HLA-H,morbid:HLA-H,.;P_loss_coord=6:29855350-29858856,6:29855350-29858856,.;po_P_gain_source=dbVar:nssv15166690|dbVar:nssv15166692|dbVar:nssv15161578|dbVar:nssv15161859|nssv15161868|dbVar:nssv15168255|dbVar:nssv15148873|dbVar:nssv15606075;po_P_gain_coord=6:60108-171054786|6:108667-170980171|6:156975-46757028|6:156976-170919482|6:165633-170919470|6:3224545-30624967|6:29455466-81447367;po_P_gain_percent=0.02|0.02|0.09|0.02|0.02|0.15|0.08;po_P_loss_source=dbVar:nssv17955655;po_P_loss_coord=6:28005013-31683185;po_P_loss_percent=1.14;B_gain_source=DDD:20149|IMH;B_gain_coord=6:29698616-29950994|6:29722846-29947201|6:29723410-29948590|6:29733227-29961287|6:29760864-29916953|6:29762617-29919277|6:29767291-29923611|6:29767394-29923982|6:29771866-29927541|6:29840747-29917149,6:29698616-29950994|6:29722846-29947201|6:29723410-29948590|6:29733227-29961287|6:29760864-29916953|6:29762617-29919277|6:29767291-29923611|6:29767394-29923982|6:29769716-29865367|6:29771866-29927541|6:29773145-29867669|6:29777143-29871794|6:29778441-29873573|6:29840747-29917149,6:29698616-29950994|6:29722846-29947201|6:29723410-29948590|6:29733227-29961287|6:29760864-29916953|6:29762617-29919277|6:29767291-29923611|6:29767394-29923982|6:29771866-29927541|6:29840747-29917149;B_gain_AFmax=0.1073;B_loss_source=1000g|DDD:20139|DDD:20142|DDD:20149|DDD:20154|IMH|dbVar|dgv1087e199|dgv7e195|esv2761013|esv2763941|esv3608493,1000g|DDD:20139|DDD:20142|DDD:20149|DDD:20154|IMH|dbVar|dgv1087e199|dgv1726e212|dgv7e195|esv2422126|esv2761013|esv2763941|esv3608493,1000g|DDD:20139|DDD:20142|DDD:20149|DDD:20154|DDD:20157|IMH|dbVar|dgv1087e199|dgv1089e199|dgv1734e212|dgv7e195|esv2761013|esv2763941|esv3608493;B_loss_coord=6:29745199-29961072|6:29805446-29928380|6:29836637-29921127|6:29837073-29937311|6:29840747-29917149|6:29842746-29916111|6:29851122-29905999|chr6:29851172-29904515|6:29851173-29904515|6:29851173-29904515|6:29851444-29899493|6:29853315-29914786,6:29745199-29961072|6:29805446-29928380|6:29829109-29874629|6:29836637-29921127|6:29837073-29937311|6:29840747-29917149|6:29842746-29916111|6:29851122-29905999|chr6:29851172-29904515|6:29851173-29904515|6:29851173-29904515|6:29851444-29865718|6:29851444-29899493|6:29853315-29914786,6:29745199-29961072|6:29805446-29928380|6:29836637-29921127|6:29837073-29937311|6:29840747-29917149|6:29842746-29916111|6:29851122-29905999|chr6:29851172-29904515|6:29851173-29904515|6:29851173-29904515|6:29851444-29899493|6:29853315-29914786|6:29861152-29916006|6:29864510-29936194|6:29890896-29906192|6:29891102-29906000;B_loss_AFmax=0.4519;B_inv_source=IMH;B_inv_coord=6:26743912-58149585|6:26745294-58149309;B_inv_AFmax=0.3871;po_B_gain_someG_source=6:29722846-29947201_IMH|6:29733227-29961287_IMH|6:29762617-29919277_IMH|6:29767394-29923982_IMH|6:29771866-29927541_IMH|6:29777143-29871794_IMH|6:29840747-29917149_DDD:20149;po_B_gain_someG_coord=6:29698616-29950994_IMH|6:29723410-29948590_IMH|6:29760864-29916953_IMH|6:29767291-29923611_IMH|6:29769716-29865367_IMH|6:29773145-29867669_IMH|6:29778441-29873573_IMH;po_B_loss_someG_source=6:29805446-29928380_DDD:20142|6:29836637-29921127_esv2763941|6:29840747-29917149_DDD:20149|6:29851122-29905999_IMH|6:29851173-29904515_1000g|6:29851444-29865718_esv2422126|6:29853315-29914786_DDD:20154|6:29861152-29916006_IMH|6:29864510-29936194_dgv1734e212|6:29890896-29906192_dgv1089e199|6:29892561-29905834_HI40:ISCA-46607;po_B_loss_someG_coord=6:29745199-29961072_DDD:20139|6:29829109-29874629_dgv1726e212|6:29837073-29937311_esv2761013|6:29842746-29916111_dgv1087e199|chr6:29851172-29904515_dbVar|6:29851173-29904515_esv3608493|6:29851444-29899493_dgv7e195|6:29859518-29886164_dgv740n27|6:29864510-29889669_dgv1732e212|6:29873934-29890069_nsv515032|6:29891102-29906000_DDD:20157;GC_content_left=0.375;GC_content_right=0.51;SegDup_left=6:29842025-29863148;NCBI_gene_ID=.,3136,80868;HGNC_gene_ID=.,HGNC:4965,HGNC:22919;OMIM_morbid=yes,yes,.;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(2_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5;END=29896710;SVLEN=-41840	GT	1/.
6	78979173	.	G	<DEL>	.	PASS	AnnotSV_ID=6_78979173_79023328_DEL_1;SV_start=78979173;Biologist_ranking=Benign;Annotation_mode=full;CytoBand=q14.1;Closest_left=MEI4;Closest_right=MIR10524;Gene_count=0;po_P_gain_source=dbVar:nssv15166690|dbVar:nssv15166692|dbVar:nssv15161859|nssv15161868|dbVar:nssv15168255|dbVar:nssv15606075|dbVar:nssv17970109|dbVar:nssv15148895;po_P_gain_coord=6:60108-171054786|6:108667-170980171|6:156976-170919482|6:165633-170919470|6:29455466-81447367|6:69938253-94379210|6:75092524-142361637;po_P_gain_percent=0.03|0.03|0.03|0.03|0.08|0.18|0.07;po_P_loss_source=dbVar:nssv17976865|dbVar:nssv15138420|dbVar:nssv17957115|dbVar:nssv17956905|dbVar:nssv15154430|dbVar:nssv16255333|dbVar:nssv15139907|dbVar:nssv16215036;po_P_loss_coord=6:64954688-79581678|6:65259549-84136510|6:70165297-79920769|6:72799055-83275894|6:73674613-84829774|6:74226560-80208037|6:76635917-93420511|6:78562076-79746800;po_P_loss_percent=0.30|0.23|0.45|0.42|0.40|0.74|0.26|3.73;B_gain_source=DDD:21366|dgv768n27|nsv516597;B_gain_coord=6:78848098-79052702|6:78950789-79066065|6:78973202-79031742;B_gain_AFmax=0.3704;B_loss_source=1000g|DDD:21366|DDD:21369|DDD:21373|IMH|dbVar|dgv10802n54|dgv1137e199|dgv1810e212|dgv1811e212|dgv6030n100|dgv6037n100|dgv766n27|dgv767n27|dgv769n27|esv2422170|esv2760997|esv2763987|esv3609657|esv3609663|esv3890888|gnomAD-SV_v2.1_DEL_6_70839|nsv514376|nsv516597;B_loss_coord=6:78836835-79051952|6:78848098-79052702|chr6:78892808-79053430|6:78892809-79053430|6:78892809-79053430|6:78950789-79066065|6:78961945-79041809|6:78962294-79041760|6:78962541-79031742|6:78962541-79052702|6:78962582-79027502|6:78962582-79041797|chr6:78962843-79034588|6:78965526-79033478|chr6:78967097-79036275|6:78967098-79036275|6:78967098-79036275|6:78967173-79036477|chr6:78967187-79036419|6:78967187-79036419|6:78967195-79036475|6:78967195-79036497|6:78969054-79027758|6:78969066-79031970|6:78969066-79035185|6:78972098-79031153|6:78972931-79033478|6:78973202-79031742;B_loss_AFmax=0.4631;B_inv_source=IMH;B_inv_coord=6:49889718-107723757;B_inv_AFmax=0.1414;po_B_gain_someG_source=6:78950789-79066065_DDD:21366|6:78973202-79031742_dgv768n27|;po_B_gain_someG_coord=6:78848098-79052702_nsv516597|6:78963972-78992918_DDD:21367|6:78999918-79033124_DDD:21375;po_B_loss_someG_source=6:78848098-79052702_nsv516597|6:78892809-79053430_1000g|6:78950789-79066065_DDD:21366|6:78962294-79041760_dgv1810e212|6:78962541-79052702_dgv767n27|6:78962582-79041797_dgv6030n100|6:78965526-79033478_esv3890888|6:78967098-79036275_1000g|6:78967173-79036477_IMH|6:78967187-79036419_gnomAD-SV_v2.1_DEL_6_70839|6:78967195-79036497_dgv1137e199|6:78969066-79031970_DDD:21373|6:78972098-79031153_nsv514376|6:78973202-79031742_dgv769n27;po_B_loss_someG_coord=6:78836835-79051952_esv2760997|chr6:78892808-79053430_dbVar|6:78892809-79053430_esv3609657|6:78961945-79041809_esv2763987|6:78962541-79031742_dgv766n27|6:78962582-79027502_dgv1811e212|chr6:78962843-79034588_dbVar|chr6:78967097-79036275_dbVar|6:78967098-79036275_esv3609663|chr6:78967187-79036419_dbVar|6:78967195-79036475_DDD:21369|6:78969054-79027758_dgv6037n100|6:78969066-79035185_esv2422170|6:78972931-79033478_dgv10802n54;GC_content_left=0.325;GC_content_right=0.27;AnnotSV_ranking_score=-1.6;AnnotSV_ranking_criteria=1B_(cf_Gene_count,_RE_gene,_-0.60)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(0_gene,_+0.00)|5F_(+0.00);ACMG_class=1;END=79023328;SVLEN=-44156	GT	1/.
7	33397468	.	C	<DEL>	.	PASS	AnnotSV_ID=7_33397468_33397607_DEL_1;SV_start=33397468;Biologist_annotation=BBS9_inframe;Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=p14.3;Gene_name=BBS9;Closest_left=RP9;Closest_right=FLJ20712;Gene_count=1;Tx=.,NM_001348036;Tx_version=.,1;Tx_start=.,33168896;Tx_end=.,33645680;Overlapped_tx_length=.,140;Overlapped_CDS_length=.,140;Overlapped_CDS_percent=.,5;Frameshift=.,yes;Exon_count=.,23;Location=.,exon16-intron16;Location2=.,CDS;Dist_nearest_SS=.,0;Nearest_SS_type=.,5';Intersect_start=.,33397467;Intersect_end=.,33397607;po_P_gain_source=dbVar:nssv15777247|dbVar:nssv15168013|dbVar:nssv15161666|nssv15161679|dbVar:nssv15168014|dbVar:nssv15161745|dbVar:nssv15161726|dbVar:nssv17970196|dbVar:nssv15161869|dbVar:nssv15161632|dbVar:nssv17970205|dbVar:nssv15133397|dbVar:nssv15154527|dbVar:nssv15146465;po_P_gain_coord=7:10366-159119707|7:10705-159122532|7:43362-159119707|7:44936-159126310|7:54186-37129317|7:54186-41915483|7:10745751-35305167|7:11048841-52863626|7:11562625-36395416|7:27507833-39072473|7:30460550-34600277|7:30463887-43470805|7:33367925-61831899;po_P_gain_percent=0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00;po_P_loss_phen=Bardet-Biedl_syndrome_9,_615986_(3)_AR;po_P_loss_source=dbVar:nssv15161318|dbVar:nssv17976840|dbVar:nssv18329275|dbVar:nssv15138559|dbVar:nssv15147510|dbVar:nssv15148432|morbid:BBS9|dbVar:nssv17971381|dbVar:nssv18790316|dbVar:nssv18790317;po_P_loss_coord=7:54186-159075079|7:25451741-33864069|7:27133787-34466477|7:30977986-33440608|7:32718004-41084581|7:32911004-44576005|7:33169176-33675379|7:33296829-33427776|7:33376034-33427776|7:33388661-33397627;po_P_loss_percent=0.00|0.00|0.00|0.01|0.00|0.00|0.03|0.11|0.27|1.56;P_snvindel_nb=2;P_snvindel_phen=Bardet-Biedl_syndrome|Bardet-Biedl_syndrome_9;B_inv_source=IMH;B_inv_coord=7:23891013-65526751|7:33013222-55782515;B_inv_AFmax=0.381;GC_content_left=0.325;GC_content_right=0.37;DDD_HI_percent=17.13;ExAC_delZ=-2.43637392050626;ExAC_dupZ=-2.53125239294469;ExAC_cnvZ=-2.47162789907313;ExAC_synZ=-0.989035894351638;ExAC_misZ=-1.15018109964609;GenCC_disease=.,Bardet-Biedl_syndrome|Bardet-Biedl_syndrome_9|ciliopathy;GenCC_moi=.,AR;GenCC_classification=.,Definitive|Strong|Supportive;GenCC_pmid=.,16380913|20177705|20301537[PMID]|21209035|250490|251248|268436|282550;NCBI_gene_ID=.,27241;HGNC_gene_ID=.,HGNC:30000;OMIM_ID=607968;OMIM_phenotype=.,Bardet-Biedl_syndrome_9,_615986_(3)_AR;OMIM_inheritance=.,AR;OMIM_morbid=yes;LOEUF_bin=4;GnomAD_pLI=4.2117e-17;ExAC_pLI=6.3752e-10;AnnotSV_ranking_score=0.9;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2E-1_(BBS9,_+0.90)|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=4,full=4;END=33397607;SVLEN=-140	GT	1/.
7	38296177	.	G	<DEL>	.	PASS	AnnotSV_ID=7_38296177_38352444_DEL_1;SV_start=38296177;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=p14.1;Gene_name=TARP;Closest_left=STARD3NL;Closest_right=TRG-AS1;Gene_count=1;Tx=.,NM_001003806;Tx_version=.,2;Tx_start=.,38299243;Tx_end=.,38313237;Overlapped_tx_length=.,13994;Overlapped_CDS_length=.,336;Overlapped_CDS_percent=.,100;Frameshift=.,no;Exon_count=.,4;Location=.,txStart-txEnd;Location2=.,5'UTR-3'UTR;Intersect_start=.,38299243;Intersect_end=.,38313237;RE_gene=SFRP4_(morbid/RE=ABC_enhancer)|VPS41_(morbid/RE=ABC_enhancer);po_P_gain_source=dbVar:nssv15777247|dbVar:nssv15168013|dbVar:nssv15161666|nssv15161679|dbVar:nssv15168014|dbVar:nssv15161726|dbVar:nssv15161869|dbVar:nssv17970205|dbVar:nssv15154527|dbVar:nssv15146465|dbVar:nssv15166972;po_P_gain_coord=7:10366-159119707|7:10705-159122532|7:43362-159119707|7:44936-159126310|7:54186-41915483|7:11048841-52863626|7:27507833-39072473|7:30463887-43470805|7:33367925-61831899|7:37213109-40255122;po_P_gain_percent=0.04|0.04|0.04|0.04|0.13|0.13|0.49|0.43|0.20|1.85;po_P_loss_source=dbVar:nssv15161318|dbVar:nssv15147510|dbVar:nssv15148432|dbVar:nssv15147453|dbVar:nssv15145850|dbVar:nssv15148950;po_P_loss_coord=7:54186-159075079|7:32718004-41084581|7:32911004-44576005|7:35500387-42053399|7:37343083-48700334|7:38217602-45343699;po_P_loss_percent=0.04|0.67|0.48|0.86|0.50|0.79;B_gain_source=dgv1888e212;B_gain_coord=7:38286516-38394857;B_gain_AFmax=0.01;B_loss_source=.,dbVar;B_loss_coord=.,chr7:38295995-38331222;B_loss_AFmax=.,0.01;B_inv_source=IMH;B_inv_coord=7:23891013-65526751|7:33013222-55782515;B_inv_AFmax=0.381;po_B_gain_someG_source=7:38286516-38394857_dgv1888e212;po_B_gain_someG_coord=7:38283523-38309532_DDD:23873;po_B_loss_someG_source=chr7:38309816-38312727_dbVar|chr7:38312421-38313034_dbVar|chr7:38318010-38318532_dbVar|chr7:38321639-38325867_dbVar|chr7:38325667-38325867_dbVar|chr7:38325667-38328166_dbVar|chr7:38331989-38335441_dbVar|chr7:38331989-38336295_dbVar|chr7:38348388-38349972_dbVar;po_B_loss_someG_coord=chr7:38295995-38331222_dbVar|chr7:38309816-38313034_dbVar|chr7:38315910-38331224_dbVar|chr7:38321639-38325667_dbVar|chr7:38321639-38326916_dbVar|chr7:38325667-38327016_dbVar|chr7:38325867-38328166_dbVar|chr7:38331989-38335610_dbVar|chr7:38335441-38335779_dbVar;GC_content_left=0.365;GC_content_right=0.32;Repeat_coord_left=7:38296252-38296527;Repeat_type_left=AluSx;SegDup_left=7:38284220-38298557;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|2G_(cf_po_B_loss_someG_source,_+0.00)|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=3,full=3;END=38352444;SVLEN=-56268	GT	1/.
7	72726579	.	T	<DEL>	.	PASS	AnnotSV_ID=7_72726579_74139390_DEL_1;SV_start=72726579;Biologist_annotation=Williams_syndrom;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=q11.23;Gene_name=TRIM50|FKBP6|FZD9|BAZ1B|BCL7B|TBL2|MLXIPL|VPS37D|DNAJC30|BUD23|STX1A|MIR4284|BICDL3P|ABHD11|CLDN3|CLDN4|METTL27|TMEM270|ELN|ELN-AS1|LIMK1|EIF4H|MIR590|LAT2|RFC2|CLIP2|GTF2IRD1|MIR10525|GTF2I|GTF2I-AS1,TRIM50,FKBP6,FZD9,BAZ1B,BCL7B,TBL2,MLXIPL,VPS37D,DNAJC30,BUD23,STX1A,MIR4284,BICDL3P,ABHD11,CLDN3,CLDN4,METTL27,TMEM270,ELN,ELN-AS1,LIMK1,EIF4H,MIR590,LAT2,RFC2,CLIP2,GTF2IRD1,MIR10525,GTF2I,GTF2I-AS1;Closest_left=NSUN5;Closest_right=NCF1;Gene_count=30;Tx=.,NM_178125,NM_003602,NM_003508,NM_001370402,NM_001301061,NM_012453,NM_032951,NM_001077621,NM_032317,NM_001202560,NM_004603,NR_036247,NR_026690,NM_148912,NM_001306,NM_001305,NM_152559,NM_182504,NM_001278939,NR_183555,NM_002314,NM_022170,NR_030321,NM_014146,NM_181471,NM_003388,NM_001199207,NR_162116,NM_032999,NR_110044;Tx_version=.,3,5,3,1,2,4,3,2,3,3,4,1,1,4,4,5,3,4,2,1,4,2,1,4,3,5,2,1,4,1;Tx_start=.,72726531,72742163,72848107,72854735,72950685,72981866,73007531,73082160,73095247,73097926,73113539,73125646,73149398,73150423,73183326,73245325,73248919,73275488,73442502,73473234,73498133,73588685,73605527,73624335,73645831,73703736,73868235,74010294,74072043,74103270;Tx_end=.,72742085,72772634,72850450,72936623,72972020,72992909,73038852,73086440,73097783,73112542,73133999,73125727,73150330,73153132,73184600,73247020,73256846,73280220,73484237,73476610,73536855,73611426,73605624,73644164,73668729,73820265,74016931,74010353,74175022,74143256;Overlapped_tx_length=.,15507,30471,2343,81888,21335,11043,31321,4280,2536,14616,20460,81,932,2709,1274,1695,7927,4732,41735,3376,38722,22741,97,19829,22898,116529,148696,59,67347,36120;Overlapped_CDS_length=.,1464,984,1776,4452,642,1344,2559,756,681,897,867,0,0,921,663,630,738,798,2361,0,1944,747,0,732,1065,3141,2931,0,943,0;Overlapped_CDS_percent=.,100,100,84,100,100,100,100,100,95,100,100,0,0,100,75,42,100,100,100,0,100,100,0,100,100,100,100,0,31,0;Frameshift=.,no,no,no,no,no,no,no,no,no,no,no,.,.,no,no,no,no,no,no,.,no,no,.,no,no,no,no,.,yes,.;Exon_count=.,7,9,1,19,7,7,17,4,1,13,10,1,4,6,1,1,6,3,34,2,16,7,1,13,11,17,27,1,35,4;Location=.,txStart-exon7,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-intron12,intron2-txEnd;Location2=.,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-CDS,UTR;Dist_nearest_SS=.,928,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3733,2349;Nearest_SS_type=.,3',.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3',5';Intersect_start=.,72726578,72742163,72848107,72854735,72950685,72981866,73007531,73082160,73095247,73097926,73113539,73125646,73149398,73150423,73183326,73245325,73248919,73275488,73442502,73473234,73498133,73588685,73605527,73624335,73645831,73703736,73868235,74010294,74072043,74103270;Intersect_end=.,72742085,72772634,72850450,72936623,72972020,72992909,73038852,73086440,73097783,73112542,73133999,73125727,73150330,73153132,73184600,73247020,73256846,73280220,73484237,73476610,73536855,73611426,73605624,73644164,73668729,73820265,74016931,74010353,74139390,74139390;RE_gene=ACOX1_(morbid/RE=mTL_miRNA)|AGO2_(morbid/RE=mTL_miRNA)|AGTPBP1_(morbid/RE=mTL_miRNA)|AHR_(morbid/RE=mTL_miRNA)|AKR1D1_(morbid/RE=mTL_miRNA)|ALDH6A1_(morbid/RE=mTL_miRNA)|ALDOA_(morbid/RE=mTL_miRNA)|APC_(HI=3/morbid/RE=mTL_miRNA)|APTX_(morbid/RE=mTL_miRNA)|ARSK_(morbid/RE=mTL_miRNA)|ATL3_(morbid/RE=mTL_miRNA)|ATP13A3_(morbid/RE=mTL_miRNA)|ATP6V0A2_(morbid/RE=mTL_miRNA)|ATP6V1A_(morbid/RE=mTL_miRNA)|ATXN1_(morbid/RE=mTL_miRNA)|BACH1_(morbid/RE=mTL_miRNA)|BVES_(morbid/RE=mTL_miRNA)|C3_(morbid/RE=mTL_miRNA)|CAPN15_(morbid/RE=mTL_miRNA)|CASP10_(morbid/RE=mTL_miRNA)|CD3D_(morbid/RE=mTL_miRNA)|CDC73_(HI=3/morbid/RE=mTL_miRNA)|CDKN1B_(HI=3/morbid/RE=mTL_miRNA)|CHRNB1_(morbid/RE=mTL_miRNA)|CIAO1_(morbid/RE=mTL_miRNA)|CISD2_(morbid/RE=mTL_miRNA)|CITED2_(morbid/RE=mTL_miRNA)|CLEC7A_(morbid/RE=mTL_miRNA)|CLN8_(morbid/RE=mTL_miRNA)|COL18A1_(morbid/RE=mTL_miRNA)|COX20_(morbid/RE=mTL_miRNA)|COX6B1_(morbid/RE=mTL_miRNA)|CPE_(morbid/RE=mTL_miRNA)|CPT1A_(morbid/RE=mTL_miRNA)|CRIPT_(morbid/RE=mTL_miRNA)|CRTAP_(morbid/RE=mTL_miRNA)|CSNK1D_(morbid/RE=mTL_miRNA)|CTSB_(morbid/RE=mTL_miRNA)|CYCS_(morbid/RE=mTL_miRNA)|DARS2_(morbid/RE=mTL_miRNA)|DBR1_(morbid/RE=mTL_miRNA)|DNA2_(morbid/RE=mTL_miRNA)|DNAAF3_(morbid/RE=mTL_miRNA)|DNAJB13_(morbid/RE=mTL_miRNA)|DNAJC3_(morbid/RE=mTL_miRNA)|DSG3_(morbid/RE=mTL_miRNA)|EDARADD_(morbid/RE=mTL_miRNA)|EIF2S3_(morbid/RE=mTL_miRNA)|EIF4A2_(morbid/RE=mTL_miRNA)|ELP2_(morbid/RE=mTL_miRNA)...;P_gain_source=dbVar:nssv15146175|nssv15148276|dbVar:nssv15146450|dbVar:nssv15147327|dbVar:nssv17955524|dbVar:nssv17976654;P_gain_coord=7:72766114-74133473|7:72766313-74133327|7:72766314-74042787|7:72766314-74133332|7:73944169-74138459;P_loss_phen=Cutis_laxa,_AD,_123700_(3)_AD|Supravalvar_aortic_stenosis,_185500_(3)_AD|Leber-like_hereditary_optic_neuropathy,_AR_1,_619382_(3)_AR|Spermatogenic_failure_77,_620103_(3)_AR,.,Spermatogenic_failure_77,_620103_(3)_AR,.,.,.,.,.,.,Leber-like_hereditary_optic_neuropathy,_AR_1,_619382_(3)_AR,.,.,.,.,.,.,.,.,.,Cutis_laxa,_AD,_123700_(3)_AD|Supravalvar_aortic_stenosis,_185500_(3)_AD,.,.,.,.,.,.,.,.,.,.,.;P_loss_source=HI3:ELN|dbVar:nssv15128343|dbVar:nssv15128578|dbVar:nssv15130113|dbVar:nssv15130169|dbVar:nssv15140244|dbVar:nssv15141480|dbVar:nssv15145649|nssv15146804|nssv15153080|dbVar:nssv15146451|dbVar:nssv15146687|dbVar:nssv15146708|dbVar:nssv15151951|nssv15605841|dbVar:nssv15167740|dbVar:nssv15770120|dbVar:nssv16208140|dbVar:nssv16213814|dbVar:nssv16214480|dbVar:nssv16214500|dbVar:nssv17172745|dbVar:nssv17172746|dbVar:nssv17955650|dbVar:nssv17971140|dbVar:nssv18786274|dbVar:nssv18791884|dbVar:nssv18791887|morbid:DNAJC30|morbid:ELN|morbid:FKBP6,.,morbid:FKBP6,.,.,.,.,.,.,morbid:DNAJC30,.,.,.,.,.,.,.,.,.,HI3:ELN|dbVar:nssv15128578|dbVar:nssv15770120|dbVar:nssv16214480|dbVar:nssv16214500|dbVar:nssv17172746|dbVar:nssv17971140|dbVar:nssv18786274|dbVar:nssv18791884|dbVar:nssv18791887|morbid:ELN,.,.,.,.,.,.,.,.,.,.,.;P_loss_coord=7:72726579-74139390|7:72742164-72772634|7:72766114-74133473|7:72766313-74133327|7:72766314-74133332|7:72772523-74133319|7:72996565-73597315|7:73023063-73524207|7:73095248-73097783|7:73150890-73604636|7:73187644-73501025|7:73442120-73484237|7:73442459-73483087|7:73442499-73442619|7:73442499-73483050|7:73442503-73484237|7:73442504-73484237|7:73442509-73483040|7:73442519-73449764|7:73442519-73483030|7:73444331-73476493|7:73449675-73483050|7:73461986-73483030|7:73470471-73498327|7:73471703-73483040|7:73482968-73483050|7:73482988-73484237|7:73791726-74133273,.,7:72742164-72772634,.,.,.,.,.,.,7:73095248-73097783,.,.,.,.,.,.,.,.,.,7:73442503-73484237|7:73442504-73484237|7:73442509-73483040|7:73442519-73449764|7:73442519-73483030|7:73444331-73476493|7:73449675-73483050|7:73461986-73483030|7:73471703-73483040|7:73482968-73483050|7:73482988-73484237,.,.,.,.,.,.,.,.,.,.,.;po_P_gain_phen=7q11.23_recurrent_(Williams-Beuren_syndrome)_region_(includes_ELN);po_P_gain_source=dbVar:nssv15777247|dbVar:nssv15168013|dbVar:nssv15161666|nssv15161679|dbVar:nssv15168014|dbVar:nssv15146013|dbVar:nssv15146778|dbVar:nssv15147714|dbVar:nssv15147012|dbVar:nssv15147013|dbVar:nssv15755212|dbVar:nssv15147334|dbVar:nssv15151509|dbVar:nssv15154519|dbVar:nssv15152109|dbVar:nssv15153678|dbVar:nssv15148173|dbVar:nssv15149887|dbVar:nssv15147399|dbVar:nssv15148904|dbVar:nssv15174166|dbVar:nssv15128409|dbVar:nssv15150793|dbVar:nssv16254014|dbVar:nssv15148877|dbVar:nssv18830985|dbVar:nssv15147014|dbVar:nssv15149513|dbVar:nssv15146773|dbVar:nssv15151227|dbVar:nssv15147017|dbVar:nssv15146395|dbVar:nssv15147458|dbVar:nssv15126184|dbVar:nssv17976854|dbVar:nssv15150228|dbVar:nssv15147556|dbVar:nssv15146449|dbVar:nssv15151508|dbVar:nssv15150733|dbVar:nssv15154518|dbVar:nssv17955880|dbVar:nssv18830970|dbVar:nssv15146933|dbVar:nssv16215249|dbVar:nssv15167739|TS3:ISCA-37392|dbVar:nssv15148970;po_P_gain_coord=7:10366-159119707|7:10705-159122532|7:43362-159119707|7:44936-159126310|7:62437464-75044630|7:71644078-78793387|7:71968213-74133332|7:72196406-74991125|7:72233836-74285345|7:72364527-73780265|7:72408603-74193374|7:72576873-74175429|7:72577022-74147166|7:72577022-74197846|7:72577022-74859638|7:72589516-74154603|7:72589516-74165401|7:72606410-74193403|7:72606410-74300084|7:72606451-74153206|7:72650008-74188572|7:72659675-74143240|7:72659675-74164894|7:72663963-74193403|7:72664462-74162586|7:72665463-74139573|7:72677174-74143140|7:72677302-74143060|7:72677302-74143240|7:72679398-74139573|7:72683245-74267189|7:72685735-74142327|7:72685764-74189674|7:72686959-74155067|7:72692113-74154497|7:72700128-74146858|7:72700415-74139573|7:72700525-74069858|7:72700525-74142256|7:72701019-74143240|7:72717346-74133310|7:72718278-74142256|7:72718279-74140708|7:72722982-74141840|7:72743984-74145064|7:72744456-74142510|7:72766314-74481540;po_P_gain_percent=0.89|0.89|0.89|0.89|11.21|19.76|64.97|50.55|68.87|74.43|79.16|88.38|89.98|87.17|61.89|90.27|89.65|89.02|83.42|91.34|91.83|95.23|93.86|92.37|94.31|95.84|96.37|96.39|96.38|96.76|89.20|96.99|93.94|96.23|96.61|97.66|98.17|98.10|97.99|97.96|99.35|99.22|99.32|99.57|99.60|99.78|80.05;po_P_loss_phen=7q11.23_recurrent_(Williams-Beuren_syndrome)_region_(includes_ELN);po_P_loss_source=dbVar:nssv15161318|dbVar:nssv15148211|dbVar:nssv15147057|dbVar:nssv15147200|dbVar:nssv16255682|dbVar:nssv15146320|dbVar:nssv15146676|dbVar:nssv16867365|dbVar:nssv15167734|dbVar:nssv15146211|dbVar:nssv16254015|dbVar:nssv15151112|dbVar:nssv15145801|dbVar:nssv15152099|dbVar:nssv17977008|dbVar:nssv15151511|dbVar:nssv17977009|dbVar:nssv15145887|dbVar:nssv15147427|dbVar:nssv15153677|dbVar:nssv15154521|dbVar:nssv16208139|dbVar:nssv15145827|dbVar:nssv15148206|dbVar:nssv15151289|dbVar:nssv18330757|dbVar:nssv15125131|dbVar:nssv17977011|dbVar:nssv15167735|dbVar:nssv15148192|dbVar:nssv15167736|dbVar:nssv15168977|dbVar:nssv18330770|dbVar:nssv16215159|dbVar:nssv15129678|dbVar:nssv15147158|dbVar:nssv15606134|dbVar:nssv15145898|dbVar:nssv15151092|dbVar:nssv15755220|dbVar:nssv17977017|dbVar:nssv15147160|dbVar:nssv15147159|dbVar:nssv15145802|dbVar:nssv15147457|dbVar:nssv15148226|dbVar:nssv15147515|dbVar:nssv15147502|dbVar:nssv15148195|dbVar:nssv15147550|dbVar:nssv17977015|dbVar:nssv15605840|dbVar:nssv17977014|dbVar:nssv15149859|dbVar:nssv17977016|dbVar:nssv15150016|dbVar:nssv15146951|dbVar:nssv16297072|dbVar:nssv18830737|dbVar:nssv15154517|nssv17977012|dbVar:nssv17977007|dbVar:nssv15146637|dbVar:nssv15149107|dbVar:nssv15150231|dbVar:nssv15150699|dbVar:nssv15150637|dbVar:nssv15151346|dbVar:nssv15148257|nssv17977121|dbVar:nssv15150643|dbVar:nssv15149860|dbVar:nssv15151090|dbVar:nssv18329614|dbVar:nssv18330419|dbVar:nssv18330223|dbVar:nssv15167737|dbVar:nssv15605774|dbVar:nssv8640006|dbVar:nssv15167738|dbVar:nssv15147726|dbVar:nssv15755221|HI3:ISCA-37392|dbVar:nssv15605838|dbVar:nssv15605839|dbVar:nssv15147324|dbVar:nssv15147329|dbVar:nssv15145670|dbVar:nssv15145679|nssv15146800|dbVar:nssv15146612|dbVar:nssv17977013|dbVar:nssv15124428|dbVar:nssv15776001|dbVar:nssv15120782|dbVar:nssv15148954|dbVar:nssv15147202;po_P_loss_coord=7:54186-159075079|7:62196743-75061986|7:68133295-72806397|7:68847340-77453149|7:68977231-73939510|7:70690331-81364973|7:70926113-72806397|7:71847969-73391310|7:72305672-74196360|7:72401087-74285345|7:72403118-76709600|7:72456605-76007380|7:72507130-74142327|7:72536981-74629034|7:72589196-74225562|7:72589516-74386749|7:72589516-74629034|7:72606410-74193403|7:72606410-74285345|7:72608515-74386749|7:72612043-74574641|7:72621723-76007380|7:72636007-74339014|7:72637825-74203685|7:72643632-74142190|7:72643633-74143060|7:72644632-74144422|7:72645014-74142190|7:72650107-74138603|7:72650121-74142256|7:72650266-74138603|7:72653307-74134911|7:72654783-74142190|7:72657229-74160300|7:72677238-74144422|7:72681398-74137354|7:72682339-74141250|7:72685735-74142327|7:72691243-74142190|7:72699383-74142329|7:72700128-74142190|7:72700415-74122179|7:72700415-74137354|7:72700415-74139573|7:72700415-74142327|7:72700415-74172913|7:72700415-74193403|7:72700415-74285345|7:72700511-74142190|7:72700525-74141494|7:72700943-74142190|7:72700997-74142190|7:72700997-74142256|7:72701019-74141493|7:72701085-74142190|7:72708238-74133273|7:72708238-74339044|7:72717370-74142224|7:72717396-74173168|7:72718124-74141784|7:72718124-74142190|7:72718253-74133273|7:72718253-74133332|7:72718278-73898515|7:72718278-74141494|7:72718278-74141603|7:72718278-74141746|7:72718278-74142190|7:72718278-74146858|7:72718278-74259899|7:72718278-74287433|7:72718279-74142256|7:72718279-74143060|7:72718279-74143240|7:72719387-74218536|7:72721450-73959106|7:72722982-74141840|7:72722982-74200092|7:72722982-74217390|7:72726591-74142329|7:72744456-74142510|7:72744495-74339044|7:72744495-76038818|7:72766313-74193397|7:72766313-74339030|7:72766314-74285345|7:72766314-74339044|7:72766314-76351578|7:72921551-74145628|7:73591994-75914797|7:73799887-75388031|7:73992745-74991125|7:73992745-81661058|7:73992745-83618176;po_P_loss_percent=0.89|10.98|1.71|16.42|24.44|13.24|4.25|43.07|74.72|74.98|32.81|39.79|86.40|67.53|86.34|78.61|69.27|89.02|84.15|79.45|71.99|41.73|82.96|90.23|94.28|94.22|94.20|94.37|94.86|94.68|94.87|95.05|94.98|93.99|96.29|96.90|96.84|96.99|97.37|97.91|97.97|98.16|98.18|98.17|97.98|95.95|94.63|89.14|98.00|98.05|98.03|98.03|98.03|98.08|98.04|98.71|86.63|99.15|97.05|99.24|99.21|99.41|99.41|99.30|99.27|99.26|99.25|99.22|98.90|91.64|90.04|99.22|99.16|99.15|94.24|99.59|99.57|95.65|94.54|99.79|99.78|87.48|42.34|96.22|87.31|90.39|87.31|38.30|99.49|23.57|21.38|14.69|1.91|1.52;P_snvindel_nb=127,.,1,.,.,.,.,.,.,1,.,1,.,.,.,.,.,.,.,124,18,.,.,.,.,.,.,.,.,.,.;P_snvindel_phen=Autism|Cutis_laxa,_autosomal_dominant_1|DNAJC30-associated_disorder|ELN-related_disorder|Inborn_genetic_diseases|Intellectual_disability|Leber-like_hereditary_optic_neuropathy,_autosomal_recessive_1|Leber_hereditary_optic_neuropathy,_autosomal_recessive|Leber_optic_atrophy,_susceptibility_to|Male_infertility|Optic_atrophy|Retinal_dystrophy|Spermatogenic_failure_77|Supravalvar_aortic_stenosis|Williams_syndrome,.,Male_infertility|Spermatogenic_failure_77,.,.,.,.,.,.,DNAJC30-associated_disorder|Leber-like_hereditary_optic_neuropathy,_autosomal_recessive_1|Leber_hereditary_optic_neuropathy,_autosomal_recessive|Leber_optic_atrophy,_susceptibility_to|Optic_atrophy|Retinal_dystrophy,.,Autism|Intellectual_disability,.,.,.,.,.,.,.,Cutis_laxa,_autosomal_dominant_1|ELN-related_disorder|Inborn_genetic_diseases|Supravalvar_aortic_stenosis|Williams_syndrome,Cutis_laxa,_autosomal_dominant_1|ELN-related_disorder|Supravalvar_aortic_stenosis,.,.,.,.,.,.,.,.,.,.;B_loss_source=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,dbVar,.,.,.,.,dbVar,.,dbVar,dbVar,dbVar,dbVar,.,.,.,.,.;B_loss_coord=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,chr7:73157999-73206000,.,.,.,.,chr7:73447215-73480401,.,chr7:73504792-73813060,chr7:73504792-73813060,chr7:73504792-73813060,chr7:73504792-73813060,.,.,.,.,.;B_loss_AFmax=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.01,.,.,.,.,0.01,.,0.01,0.01,0.01,0.01,.,.,.,.,.;B_inv_source=IMH;B_inv_coord=7:66631329-143298938|7:67635774-98083201;B_inv_AFmax=0.5;po_B_gain_someG_source=7:74110032-74113459_DDD:24519|;po_B_gain_someG_coord=7:74103674-74113108_DDD:24517|7:74111368-74111473_DDD:24520;po_B_loss_someG_source=chr7:72788610-72788928_dbVar|chr7:72792927-72794734_dbVar|chr7:72807457-72811747_dbVar|chr7:72809374-72811765_dbVar|chr7:72831507-72833102_dbVar|chr7:72831655-72833172_dbVar|7:72859067-72859930_DDD:24502|chr7:72859126-72859948_dbVar|chr7:72958486-72958582_dbVar|chr7:72976072-72983729_dbVar|chr7:73003322-73003446_dbVar|chr7:73047101-73047474_dbVar|chr7:73062999-73081000_dbVar|chr7:73072977-73073093_dbVar|chr7:73106347-73106427_dbVar|chr7:73157999-73206000_dbVar|chr7:73190196-73190548_dbVar|chr7:73196830-73198271_dbVar|chr7:73211482-73211654_dbVar|chr7:73223050-73223264_dbVar...;po_B_loss_someG_coord=chr7:72783921-72784587_dbVar|chr7:72790491-72790586_dbVar|chr7:72806431-72813279_dbVar|chr7:72809373-72811754_dbVar|7:72809386-72811787_DDD:24500|7:72831554-72833141_DDD:24501|chr7:72850871-72854146_dbVar|chr7:72859093-72859952_dbVar|chr7:72955017-72955274_dbVar|chr7:72962422-72963182_dbVar|chr7:73002815-73002896_dbVar|chr7:73023279-73023954_dbVar|chr7:73054513-73055107_dbVar|chr7:73065479-73067124_dbVar|chr7:73090809-73093167_dbVar|chr7:73146454-73146754_dbVar|chr7:73173329-73173399_dbVar|chr7:73196779-73198220_dbVar|chr7:73211482-73211632_dbVar|chr7:73222000-73236000_dbVar...;GC_content_left=0.37;GC_content_right=0.355;Repeat_coord_left=7:72726181-72726486;Repeat_type_left=AluSz;SegDup_left=7:72700438-72744454|7:72700443-72744454;HI=3,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3,.,0,.,.,.,.,.,0,.,0,.;TS=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,0,.,.,.,.,.,0,.,0,.;DDD_HI_percent=88.46,55.55,65.69,46.95,23.74,28.63,30.81,36.45,64.11,80.16,.,22.82,.,.,76.55,33.46,23.72,.,.,8.62,.,19.66,21.78,.,88.46,14.42,47.98,47.51,.,33.5,.;ExAC_delZ=1.77201404347458,.,.,0.247827425263201,1.02239565516008,1.05583278690403,-0.199291215312469,0.942636989769333,.,0.717396479665947,.,0.950800964625408,.,.,0.643446275430498,0.332553044404404,0.563064431580096,.,.,0.1188507761401,.,0.623604739936053,0.339580839486745,.,0.592710857132059,0.200864992787726,1.014608801418,1.77201404347458,.,.,.;ExAC_dupZ=0.0159631069818757,.,.,-1.18776035129969,0.0159631069818757,-0.553040364632404,-0.922199212243606,-0.774220086661663,.,-0.500797326082256,.,-0.794674734358171,.,.,-0.675433866559718,-0.966715148489597,-0.809178554455325,.,.,-1.61408470478924,.,-0.79212126645541,-0.49261121282204,.,-0.653878691847743,-0.430045328414053,-0.895566510532316,-0.0325005901648791,.,.,.;ExAC_cnvZ=0.491444562429841,.,.,-0.895389454591556,0.395552906953086,-0.0819162539430506,-0.751016280020485,-0.327638361779731,.,-0.15204008716984,.,-0.324619004824717,.,.,-0.327510119466819,-0.688425296234703,-0.46244511082827,.,.,-1.04153334326364,.,-0.396805714672051,-0.247951312124761,.,-0.292110083865967,-0.225638310792768,-0.401705936344982,0.491444562429841,.,.,.;ExAC_synZ=2.70903614483931,0.317380023327075,1.49986407027643,.,-0.902054979760057,-0.44503506022657,0.200201742907301,0.58127606528246,-0.0288746954043306,1.08623431117684,.,1.10438995088098,.,.,1.09331776236833,2.70903614483931,-0.0167724140747313,.,.,-0.09395744769762,.,-0.48782967368913,-0.250271670703448,.,0.385787155434006,-0.430513909559958,-0.746648021563001,0.977775575032158,.,0.964550444182401,.;ExAC_misZ=4.23220859072885,0.681275321847818,1.4396607305099,.,4.05717005254254,1.74981493260157,0.554223709974506,1.2288879277127,0.953055172354045,1.71697083676563,.,3.33806479625907,.,.,0.473373375061211,1.92914089110849,0.933080799622852,.,.,-0.0129976080826519,.,2.85746490313868,3.27930650064444,.,-0.303087706786894,1.53581142075512,2.45305749434808,2.53365459317235,.,4.23220859072885,.;GenCC_disease=.,.,spermatogenic_failure_77,.,autism_spectrum_disorder,.,.,.,.,Leber_hereditary_optic_neuropathy|Leber_hereditary_optic_neuropathy,_autosomal_recessive,.,cystic_fibrosis,.,.,.,.,.,.,.,autosomal_dominant_cutis_laxa|cutis_laxa,_autosomal_dominant_1|familial_thoracic_aortic_aneurysm_and_aortic_dissection|supravalvular_aortic_stenosis,.,.,.,.,.,.,.,neurodevelopmental_disorder,.,.,.;GenCC_moi=.,.,AR,.,AD,.,.,.,.,AR|MT,.,AR,.,.,.,.,.,.,.,AD,.,.,.,.,.,.,.,AR,.,.,.;GenCC_classification=.,.,Moderate,.,Limited,.,.,.,.,Limited|Strong|Supportive,.,Supportive,.,.,.,.,.,.,.,Definitive|Limited|Strong|Supportive,.,.,.,.,.,.,.,Limited,.,.,.;GenCC_pmid=.,.,.,.,.,.,.,.,.,33465056|33465056[PMID],.,23572023,.,.,.,.,.,.,.,10942104[PMID]_19844261[PMID]|11175284|16085695[PMID]_18348261[PMID]|18348261|19844261|21309044|23442826|27866049|28383366|31560829|8364568,.,.,.,.,.,.,.,36308390,.,.,.;NCBI_gene_ID=.,135892,8468,8326,9031,9275,26608,51085,155382,84277,114049,6804,100422948,171022,83451,1365,1364,155368,135886,2006,107986809,3984,7458,693175,7462,5982,7461,9569,113218504,2969,101926943;HGNC_gene_ID=.,HGNC:19017,HGNC:3722,HGNC:4047,HGNC:961,HGNC:1005,HGNC:11586,HGNC:12744,HGNC:18287,HGNC:16410,HGNC:16405,HGNC:11433,HGNC:38322,HGNC:18289,HGNC:16407,HGNC:2045,HGNC:2046,HGNC:19068,HGNC:23018,HGNC:3327,HGNC:40212,HGNC:6613,HGNC:12741,HGNC:32846,HGNC:12749,HGNC:9970,HGNC:2586,HGNC:4661,HGNC:54015,HGNC:4659,HGNC:55572;OMIM_ID=604839|618202|130160,.,604839,.,.,.,.,.,.,618202,.,.,.,.,.,.,.,.,.,130160,.,.,.,.,.,.,.,.,.,.,.;OMIM_phenotype=.,.,Spermatogenic_failure_77,_620103_(3)_AR,.,.,.,.,.,.,Leber-like_hereditary_optic_neuropathy,_AR_1,_619382_(3)_AR,.,.,.,.,.,.,.,.,.,Cutis_laxa,_AD,_123700_(3)_AD|Supravalvar_aortic_stenosis,_185500_(3)_AD,.,.,.,.,.,.,.,.,.,.,.;OMIM_inheritance=.,.,AR,.,.,.,.,.,.,AR,.,.,.,.,.,.,.,.,.,AD,.,.,.,.,.,.,.,.,.,.,.;OMIM_morbid=yes,.,yes,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,.,.;LOEUF_bin=0,7,5,4,0,3,4,2,1,7,.,1,.,.,5,4,9,.,.,4,.,0,2,.,4,5,0,1,.,1,.;GnomAD_pLI=1,1.5479e-10,1.3955e-06,0.0019309,1,0.18519,0.00018452,0.047771,0.91622,0.023092,.,0.9785,.,.,0.0029581,0.52233,6.9789e-05,.,.,2.1429e-14,.,0.99937,0.43982,.,0.00022295,2.2054e-06,0.99997,0.90039,.,0.99592,.;ExAC_pLI=1,2.7256e-06,0.1306,.,1,0.70664,0.0043765,0.67682,0.65635,0.0047983,.,0.91048,.,.,9.0329e-06,0.67854,0.00013716,.,.,1.52e-05,.,0.9909,0.92254,.,0.00069106,4.0421e-05,0.99988,0.99643,.,0.99935,.;AnnotSV_ranking_score=1.45;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3B_(30_genes,_+0.45)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=74139390;SVLEN=-1412812	GT	1/.
8	7169491	.	G	<DEL>	.	PASS	AnnotSV_ID=8_7169491_7753583_DEL_1;SV_start=7169491;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p23.1;Gene_name=FAM66B|DEFB109B|USP17L1|USP17L4|ZNF705G|DEFB4B|DEFB103B|SPAG11B|DEFB104B|DEFB106B|DEFB105B|DEFB107B|PRR23D1|FAM90A7|FAM90A22|FAM90A23|FAM90A14|FAM90A18|FAM90A16|FAM90A8|FAM90A17|FAM90A19|FAM90A9|FAM90A10|PRR23D2|DEFB107A|DEFB105A|DEFB106A|DEFB104A|SPAG11A|DEFB103A|DEFB4A,FAM66B,DEFB109B,USP17L1,USP17L4,ZNF705G,DEFB4B,DEFB103B,SPAG11B,DEFB104B,DEFB106B,DEFB105B,DEFB107B,PRR23D1,FAM90A7,FAM90A22,FAM90A23,FAM90A14,FAM90A18,FAM90A16,FAM90A8,FAM90A17,FAM90A19,FAM90A9,FAM90A10,PRR23D2,DEFB107A,DEFB105A,DEFB106A,DEFB104A,SPAG11A,DEFB103A,DEFB4A;Closest_left=FAM90A20;Closest_right=ZNF705B;Gene_count=32;Tx=.,NR_027423,NM_001037380,NM_001256873,NM_001256874,NM_001164457,NM_001205266,NM_018661,NM_058201,NM_001040702,NM_001040704,NM_001040703,NM_001040705,NM_001282479,NM_001397387,NM_001397382,NM_001397380,NM_001164452,NM_001164451,NM_001397396,NM_001164450,NM_001397391,NM_001164449,NM_001164448,NM_001164447,NM_001282478,NM_001037668,NM_152250,NM_152251,NM_080389,NM_001395484,NM_001081551,NM_004942;Tx_version=.,2,2,1,1,3,2,4,4,1,2,3,2,1,1,1,1,1,1,1,1,1,1,1,1,1,1,3,4,3,1,4,4;Tx_start=.,7156265,7170243,7189908,7194636,7213038,7272376,7286409,7308124,7327829,7340025,7345200,7353432,7397148,7414221,7429516,7437165,7572964,7580612,7588260,7595908,7603555,7611203,7618851,7626498,7636112,7669241,7678525,7682660,7693957,7705529,7738913,7752198;Tx_end=.,7212885,7177618,7191501,7196229,7243080,7274385,7287870,7321064,7332604,7343922,7347115,7366833,7399972,7417234,7432528,7440175,7575975,7583623,7591271,7598918,7606566,7614214,7621862,7629510,7638935,7673238,7681402,7686575,7698764,7718465,7740185,7754238;Overlapped_tx_length=.,43395,7375,1593,1593,30042,2009,1461,12940,4775,3897,1915,13401,2824,3013,3012,3010,3011,3011,3011,3010,3011,3011,3011,3012,2823,3997,2877,3915,4807,12936,1272,1385;Overlapped_CDS_length=.,0,264,1593,1593,903,195,204,402,219,198,237,213,840,1395,1395,1395,1395,1395,1395,1395,1395,1395,1395,1395,840,213,237,198,219,402,204,58;Overlapped_CDS_percent=.,0,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,29;Frameshift=.,.,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,yes;Exon_count=.,7,2,1,1,7,2,2,3,2,2,3,2,4,4,4,4,4,4,4,4,4,4,4,4,4,2,3,2,2,3,2,2;Location=.,txStart-intron6,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-intron1;Location2=.,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-CDS;Dist_nearest_SS=.,9797,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,412;Nearest_SS_type=.,3',.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3';Intersect_start=.,7169490,7170243,7189908,7194636,7213038,7272376,7286409,7308124,7327829,7340025,7345200,7353432,7397148,7414221,7429516,7437165,7572964,7580612,7588260,7595908,7603555,7611203,7618851,7626498,7636112,7669241,7678525,7682660,7693957,7705529,7738913,7752198;Intersect_end=.,7212885,7177618,7191501,7196229,7243080,7274385,7287870,7321064,7332604,7343922,7347115,7366833,7399972,7417234,7432528,7440175,7575975,7583623,7591271,7598918,7606566,7614214,7621862,7629510,7638935,7673238,7681402,7686575,7698764,7718465,7740185,7753583;RE_gene=MCPH1_(morbid/RE=ABC_enhancer+GH_promoter_enhancer);po_P_gain_source=dbVar:nssv15169207|dbVar:nssv15128680|dbVar:nssv15161508|dbVar:nssv15161747|dbVar:nssv17976867|dbVar:nssv17957391|dbVar:nssv15154583|dbVar:nssv15161801|nssv15777239|nssv17976962|dbVar:nssv15154584|dbVar:nssv16206921|dbVar:nssv15154580|dbVar:nssv15161417|nssv15161657|dbVar:nssv15147671|dbVar:nssv15161846|dbVar:nssv15150473|dbVar:nssv15127651|dbVar:nssv15149098|dbVar:nssv15169210|dbVar:nssv15154582|dbVar:nssv15146537|dbVar:nssv15161807|dbVar:nssv15161553|dbVar:nssv15161105|dbVar:nssv15161095|dbVar:nssv15161561|dbVar:nssv15161078|dbVar:nssv15147455|dbVar:nssv16736635|dbVar:nssv15161269|dbVar:nssv15161748|dbVar:nssv15161749|dbVar:nssv15143576|dbVar:nssv15161775|dbVar:nssv15146180|dbVar:nssv15161087|dbVar:nssv15161068|dbVar:nssv15161792|dbVar:nssv15606063|dbVar:nssv15151542|dbVar:nssv15161084|dbVar:nssv16206931|dbVar:nssv15154577|dbVar:nssv15161089|dbVar:nssv15151538|dbVar:nssv15152254|dbVar:nssv18842054|dbVar:nssv15161540|dbVar:nssv15161727|dbVar:nssv15161764;po_P_gain_coord=8:10214-146293414|8:13939-146304022|8:46311-11879315|8:46311-30472220|8:158049-10348413|8:158049-11936107|8:158049-13974319|8:158049-146295771|8:158049-15423270|8:158049-8102819|8:158049-9750676|8:158050-146295771|8:158992-13304906|8:158992-146280828|8:158992-17536147|8:163683-46938942|8:164985-11860845|8:164985-146293414|8:168484-13147575|8:169854-10022996|8:176453-12556063|8:176453-12570496|8:176453-146294098|8:176453-16137655|8:176453-34349408|8:176453-37879246|8:176453-7838959|8:176815-43396776|8:191531-146274835|8:191531-146280020|8:191531-17536206|8:191531-22404983|8:191531-23055911|8:191531-7752586|8:191606-146280167|8:191606-24514484|8:191606-30948590|8:194618-13947374|8:1825201-24533193|8:6961184-12157391|8:6999220-11895232|8:6999220-11898980|8:6999220-38553064|8:6999220-8881836|8:7053187-11805960|8:7080282-12045269|8:7169491-12404062|8:7268820-12039974|8:7691902-12039974;po_P_gain_percent=0.40|0.40|4.94|1.92|5.73|4.96|4.23|0.40|3.83|7.35|6.09|0.40|4.44|0.40|3.36|1.25|4.99|0.40|4.50|5.93|4.72|4.71|0.40|3.66|1.71|1.55|7.62|1.35|0.40|0.40|3.37|2.63|2.55|7.71|0.40|2.40|1.90|4.25|2.57|11.24|11.93|11.92|1.85|31.03|12.29|11.76|11.16|10.16|1.42;po_P_loss_source=dbVar:nssv15168702|dbVar:nssv15169206|dbVar:nssv18842057|dbVar:nssv17956019|dbVar:nssv15154581|dbVar:nssv18326425|dbVar:nssv15149861|dbVar:nssv15775686|dbVar:nssv17976739|dbVar:nssv16208166|dbVar:nssv15774257|dbVar:nssv15149509|dbVar:nssv18330306|dbVar:nssv18329623|dbVar:nssv16216869|dbVar:nssv15169209|dbVar:nssv15223191|dbVar:nssv15147275|dbVar:nssv15148964|dbVar:nssv15147296|dbVar:nssv15146181|nssv15146816|dbVar:nssv15606064|dbVar:nssv15146660|dbVar:nssv18841910|dbVar:nssv15161264|nssv15161582|dbVar:nssv15145917|dbVar:nssv15161283|dbVar:nssv15161284|dbVar:nssv15161070|dbVar:nssv15141976|dbVar:nssv15161050;po_P_loss_coord=8:10214-10197718|8:10214-8948469|8:10502-11142629|8:10502-7214947|8:158049-10939681|8:158049-11281408|8:158049-13309069|8:158049-14214722|8:158049-30187456|8:158049-9025197|8:158049-9393052|8:158049-9749574|8:158050-10965627|8:158050-18936715|8:161517-11516619|8:164985-10007227|8:176815-7753583|8:191531-10049105|8:191531-10315994|8:191531-10724642|8:191531-7752586|8:194618-7787444|8:360370-7334625|8:399894-23712417|8:2292236-27361796|8:3791728-11384448|8:7053187-12241152|8:7092360-12372324|8:7169491-12404062|8:7268820-11805960|8:7268820-11819316;po_P_loss_percent=5.73|6.53|5.25|0.63|5.42|5.25|4.44|4.16|1.95|6.59|6.32|6.09|5.40|3.11|5.14|5.93|7.71|5.93|5.77|5.55|7.71|7.69|2.37|2.51|2.33|7.69|11.26|11.06|11.16|10.68|10.65;B_gain_source=DDD:26674|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA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69|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89341|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|HI40:ISCA-46380|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89353,DDD:26674|DDD:26727|HI40:ISCA-37472|HI40:ISCA-46380|HI40:ISCA-46382|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89353|gnomAD-SV_v2.1_DEL_8_89355;B_loss_coord=8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289|8:7158046-7189992|8:7158202-7189800,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289|8:7190892-7196288,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7402900-7419700|8:7402900-7419700|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:702489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notSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3B_(32_genes,_+0.45)|5F_(+0.00);ACMG_class=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3;END=7753583;SVLEN=-584093	GT	1/.
8	7169491	.	G	<DUP>	.	PASS	AnnotSV_ID=8_7169491_7753583_DUP_1;SV_start=7169491;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p23.1;Gene_name=FAM66B|DEFB109B|USP17L1|USP17L4|ZNF705G|DEFB4B|DEFB103B|SPAG11B|DEFB104B|DEFB106B|DEFB105B|DEFB107B|PRR23D1|FAM90A7|FAM90A22|FAM90A23|FAM90A14|FAM90A18|FAM90A16|FAM90A8|FAM90A17|FAM90A19|FAM90A9|FAM90A10|PRR23D2|DEFB107A|DEFB105A|DEFB106A|DEFB104A|SPAG11A|DEFB103A|DEFB4A,FAM66B,DEFB109B,USP17L1,USP17L4,ZNF705G,DEFB4B,DEFB103B,SPAG11B,DEFB104B,DEFB106B,DEFB105B,DEFB107B,PRR23D1,FAM90A7,FAM90A22,FAM90A23,FAM90A14,FAM90A18,FAM90A16,FAM90A8,FAM90A17,FAM90A19,FAM90A9,FAM90A10,PRR23D2,DEFB107A,DEFB105A,DEFB106A,DEFB104A,SPAG11A,DEFB103A,DEFB4A;Closest_left=FAM90A20;Closest_right=ZNF705B;Gene_count=32;Tx=.,NR_027423,NM_001037380,NM_001256873,NM_001256874,NM_001164457,NM_001205266,NM_018661,NM_058201,NM_001040702,NM_001040704,NM_001040703,NM_001040705,NM_001282479,NM_001397387,NM_001397382,NM_001397380,NM_001164452,NM_001164451,NM_001397396,NM_001164450,NM_001397391,NM_001164449,NM_001164448,NM_001164447,NM_001282478,NM_001037668,NM_152250,NM_152251,NM_080389,NM_001395484,NM_001081551,NM_004942;Tx_version=.,2,2,1,1,3,2,4,4,1,2,3,2,1,1,1,1,1,1,1,1,1,1,1,1,1,1,3,4,3,1,4,4;Tx_start=.,7156265,7170243,7189908,7194636,7213038,7272376,7286409,7308124,7327829,7340025,7345200,7353432,7397148,7414221,7429516,7437165,7572964,7580612,7588260,7595908,7603555,7611203,7618851,7626498,7636112,7669241,7678525,7682660,7693957,7705529,7738913,7752198;Tx_end=.,7212885,7177618,7191501,7196229,7243080,7274385,7287870,7321064,7332604,7343922,7347115,7366833,7399972,7417234,7432528,7440175,7575975,7583623,7591271,7598918,7606566,7614214,7621862,7629510,7638935,7673238,7681402,7686575,7698764,7718465,7740185,7754238;Overlapped_tx_length=.,43395,7375,1593,1593,30042,2009,1461,12940,4775,3897,1915,13401,2824,3013,3012,3010,3011,3011,3011,3010,3011,3011,3011,3012,2823,3997,2877,3915,4807,12936,1272,1385;Overlapped_CDS_length=.,0,264,1593,1593,903,195,204,402,219,198,237,213,840,1395,1395,1395,1395,1395,1395,1395,1395,1395,1395,1395,840,213,237,198,219,402,204,58;Overlapped_CDS_percent=.,0,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,29;Frameshift=.,.,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,yes;Exon_count=.,7,2,1,1,7,2,2,3,2,2,3,2,4,4,4,4,4,4,4,4,4,4,4,4,4,2,3,2,2,3,2,2;Location=.,txStart-intron6,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-intron1;Location2=.,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-CDS;Dist_nearest_SS=.,9797,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,412;Nearest_SS_type=.,3',.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3';Intersect_start=.,7169490,7170243,7189908,7194636,7213038,7272376,7286409,7308124,7327829,7340025,7345200,7353432,7397148,7414221,7429516,7437165,7572964,7580612,7588260,7595908,7603555,7611203,7618851,7626498,7636112,7669241,7678525,7682660,7693957,7705529,7738913,7752198;Intersect_end=.,7212885,7177618,7191501,7196229,7243080,7274385,7287870,7321064,7332604,7343922,7347115,7366833,7399972,7417234,7432528,7440175,7575975,7583623,7591271,7598918,7606566,7614214,7621862,7629510,7638935,7673238,7681402,7686575,7698764,7718465,7740185,7753583;RE_gene=MCPH1_(morbid/RE=ABC_enhancer+GH_promoter_enhancer);po_P_gain_source=dbVar:nssv15169207|dbVar:nssv15128680|dbVar:nssv15161508|dbVar:nssv15161747|dbVar:nssv17976867|dbVar:nssv17957391|dbVar:nssv15154583|dbVar:nssv15161801|nssv15777239|nssv17976962|dbVar:nssv15154584|dbVar:nssv16206921|dbVar:nssv15154580|dbVar:nssv15161417|nssv15161657|dbVar:nssv15147671|dbVar:nssv15161846|dbVar:nssv15150473|dbVar:nssv15127651|dbVar:nssv15149098|dbVar:nssv15169210|dbVar:nssv15154582|dbVar:nssv15146537|dbVar:nssv15161807|dbVar:nssv15161553|dbVar:nssv15161105|dbVar:nssv15161095|dbVar:nssv15161561|dbVar:nssv15161078|dbVar:nssv15147455|dbVar:nssv16736635|dbVar:nssv15161269|dbVar:nssv15161748|dbVar:nssv15161749|dbVar:nssv15143576|dbVar:nssv15161775|dbVar:nssv15146180|dbVar:nssv15161087|dbVar:nssv15161068|dbVar:nssv15161792|dbVar:nssv15606063|dbVar:nssv15151542|dbVar:nssv15161084|dbVar:nssv16206931|dbVar:nssv15154577|dbVar:nssv15161089|dbVar:nssv15151538|dbVar:nssv15152254|dbVar:nssv18842054|dbVar:nssv15161540|dbVar:nssv15161727|dbVar:nssv15161764;po_P_gain_coord=8:10214-146293414|8:13939-146304022|8:46311-11879315|8:46311-30472220|8:158049-10348413|8:158049-11936107|8:158049-13974319|8:158049-146295771|8:158049-15423270|8:158049-8102819|8:158049-9750676|8:158050-146295771|8:158992-13304906|8:158992-146280828|8:158992-17536147|8:163683-46938942|8:164985-11860845|8:164985-146293414|8:168484-13147575|8:169854-10022996|8:176453-12556063|8:176453-12570496|8:176453-146294098|8:176453-16137655|8:176453-34349408|8:176453-37879246|8:176453-7838959|8:176815-43396776|8:191531-146274835|8:191531-146280020|8:191531-17536206|8:191531-22404983|8:191531-23055911|8:191531-7752586|8:191606-146280167|8:191606-24514484|8:191606-30948590|8:194618-13947374|8:1825201-24533193|8:6961184-12157391|8:6999220-11895232|8:6999220-11898980|8:6999220-38553064|8:6999220-8881836|8:7053187-11805960|8:7080282-12045269|8:7169491-12404062|8:7268820-12039974|8:7691902-12039974;po_P_gain_percent=0.40|0.40|4.94|1.92|5.73|4.96|4.23|0.40|3.83|7.35|6.09|0.40|4.44|0.40|3.36|1.25|4.99|0.40|4.50|5.93|4.72|4.71|0.40|3.66|1.71|1.55|7.62|1.35|0.40|0.40|3.37|2.63|2.55|7.71|0.40|2.40|1.90|4.25|2.57|11.24|11.93|11.92|1.85|31.03|12.29|11.76|11.16|10.16|1.42;po_P_loss_source=dbVar:nssv15168702|dbVar:nssv15169206|dbVar:nssv18842057|dbVar:nssv17956019|dbVar:nssv15154581|dbVar:nssv18326425|dbVar:nssv15149861|dbVar:nssv15775686|dbVar:nssv17976739|dbVar:nssv16208166|dbVar:nssv15774257|dbVar:nssv15149509|dbVar:nssv18330306|dbVar:nssv18329623|dbVar:nssv16216869|dbVar:nssv15169209|dbVar:nssv15223191|dbVar:nssv15147275|dbVar:nssv15148964|dbVar:nssv15147296|dbVar:nssv15146181|nssv15146816|dbVar:nssv15606064|dbVar:nssv15146660|dbVar:nssv18841910|dbVar:nssv15161264|nssv15161582|dbVar:nssv15145917|dbVar:nssv15161283|dbVar:nssv15161284|dbVar:nssv15161070|dbVar:nssv15141976|dbVar:nssv15161050;po_P_loss_coord=8:10214-10197718|8:10214-8948469|8:10502-11142629|8:10502-7214947|8:158049-10939681|8:158049-11281408|8:158049-13309069|8:158049-14214722|8:158049-30187456|8:158049-9025197|8:158049-9393052|8:158049-9749574|8:158050-10965627|8:158050-18936715|8:161517-11516619|8:164985-10007227|8:176815-7753583|8:191531-10049105|8:191531-10315994|8:191531-10724642|8:191531-7752586|8:194618-7787444|8:360370-7334625|8:399894-23712417|8:2292236-27361796|8:3791728-11384448|8:7053187-12241152|8:7092360-12372324|8:7169491-12404062|8:7268820-11805960|8:7268820-11819316;po_P_loss_percent=5.73|6.53|5.25|0.63|5.42|5.25|4.44|4.16|1.95|6.59|6.32|6.09|5.40|3.11|5.14|5.93|7.71|5.93|5.77|5.55|7.71|7.69|2.37|2.51|2.33|7.69|11.26|11.06|11.16|10.68|10.65;B_gain_source=DDD:26674|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA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69|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89341|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|HI40:ISCA-46380|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89353,DDD:26674|DDD:26727|HI40:ISCA-37472|HI40:ISCA-46380|HI40:ISCA-46382|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89353|gnomAD-SV_v2.1_DEL_8_89355;B_loss_coord=8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289|8:7158046-7189992|8:7158202-7189800,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289|8:7190892-7196288,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7402900-7419700|8:7402900-7419700|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630|8:7736500-7764500|chr8:7736500-7764500|8:7736500-7764500,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630|8:7736500-7764500|chr8:7736500-7764500|8:7736500-7764500|8:7745000-7754100|chr8:7745000-7754100|8:7745000-7754100;B_loss_AFmax=0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.5803,0.4842,0.4842,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.3262,0.5182;po_B_gain_someG_source=8:6959834-8600711_esv2764098|8:7024892-8031414_DDD:26674|8:7053187-8130689_TS40:ISCA-37472|8:7170611-7177489_nsv515099|8:7201176-7392220_DDD:26689|8:7212583-7227421_1000g|8:7212583-7227421_TS40:ISCA-46631|8:7241528-7403182_nsv515100|8:7308244-7308706_DDD:26704|8:7632945-7856630_DDD:26727|8:7717878-7717938_DDD:26737|8:7734213-7856702_DDD:26743|8:7737000-7743100_gnomAD-SV_v2.1_DUP_8_23708|8:6959834-8600711_esv2764098|8:7024892-8031414_DDD:26674|8:7053187-8130689_TS40:ISCA-37472|8:7170611-7177489_nsv515099|8:7201176-7392220_DDD:26689|8:7212583-7227421_1000g|8:7212583-7227421_TS40:ISCA-46631...;po_B_gain_someG_coord=8:6858816-8072303_esv2761169|8:6985776-7230992_DDD:26670|8:7035907-7428513_DDD:26675|8:7154889-7213289_DDD:26682|8:7190891-7190961_DDD:26685|8:7212583-7227421_1000g|8:7212583-7227421_1000g|8:7212583-7227421_dgv1365e214|8:7250369-7832042_dgv6936n100|8:7401394-7472190_DDD:26720|8:7634705-7829839_DDD:26729|8:7718891-7784263_DDD:26742|8:7737000-7743100_TS40:ISCA-46381|8:6858816-8072303_esv2761169|8:6985776-7230992_DDD:26670|8:7035907-7428513_DDD:26675|8:7154889-7213289_DDD:26682|8:7190891-7190961_DDD:26685|8:7212583-7227421_1000g|8:7212583-7227421_1000g...;po_B_loss_someG_source=8:6959834-8600711_esv2764098|8:7024892-8031414_DDD:26674|8:7053187-8130689_HI40:ISCA-37472|8:7154889-7213289_DDD:26682|8:7158202-7189800_DDD:26683|chr8:7179582-7191032_dbVar|8:7179583-7191032_esv3616115|8:7190891-7190961_DDD:26685|chr8:7201000-7206400_dbVar|chr8:7204184-7204308_dbVar|8:7212583-7227421_1000g|chr8:7221359-7221602_dbVar|8:7228000-7235000_gnomAD-SV_v2.1_DEL_8_89335|chr8:7286205-7286328_dbVar|chr8:7326402-7326559_dbVar|8:7355000-7363000_gnomAD-SV_v2.1_DEL_8_89340|8:7355294-7364762_1000g|8:7401394-7472190_DDD:26720|8:7402900-7419700_gnomAD-SV_v2.1_DEL_8_89341|8:7405950-7443050_gnomAD-SV_v2.1_DEL_8_89342...;po_B_loss_someG_coord=8:6858816-8072303_esv2761169|8:6985776-7230992_DDD:26670|8:7035907-7428513_DDD:26675|chr8:7085462-7537934_dbVar|8:7158046-7189992_esv2675221|chr8:7175745-7175870_dbVar|8:7179583-7191032_1000g|chr8:7180382-7180743_dbVar|8:7190892-7196288_DDD:26687|8:7201000-7206400_gnomAD-SV_v2.1_DEL_8_89332|chr8:7212582-7227421_dbVar|8:7212583-7227421_esv3616116|chr8:7228000-7235000_dbVar|chr8:7276552-7277128_dbVar|8:7308244-7308706_DDD:26704|chr8:7355000-7363000_dbVar|chr8:7355293-7364762_dbVar|8:7355294-7364762_esv3616120|chr8:7402900-7419700_dbVar|chr8:7405950-7443050_dbVar...;GC_content_left=0.26;GC_content_right=0.33;SegDup_left=8:7150797-7184572|8:7150797-7195814|8:7150797-7200543|8:7150798-7238459;SegDup_right=8:7600001-7825413;ENCODE_blacklist_left=8:7012601-8066200;ENCODE_blacklist_characteristics_left=High_Signal_Region;ENCODE_blacklist_right=8:7012601-8066200;ENCODE_blacklist_characteristics_right=High_Signal_Region;DDD_HI_percent=99.72,.,.,.,.,91.1,99.72,85.97,89.4,95.66,93.29,90.95,91.71,.,.,.,.,.,.,.,.,.,.,.,.,.,92.48,90.61,90.45,96.98,97.15,93.4,97.87;ExAC_synZ=2.14121257165536,.,.,.,.,-1.59751875296103,.,.,2.14121257165536,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.918523398770926,0.676417083229402,1.33624136747443,0.140072348156658,.,1.12959151611996;ExAC_misZ=2.19863945242443,.,.,.,.,-3.97736276921453,.,.,1.8677219993927,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.008093353918723,1.6332400949348,2.19863945242443,0.903069021299127,.,0.758429673080804;NCBI_gene_ID=.,100128890,641517,401447,645402,100131980,100289462,55894,10407,503618,503841,504180,503614,100131608,441317,645558,645572,645651,441326,441323,441324,728746,728753,441327,441328,100133251,245910,245908,245909,140596,653423,414325,1673;HGNC_gene_ID=.,HGNC:28890,HGNC:33469,HGNC:37182,HGNC:37176,HGNC:37134,HGNC:30193,HGNC:31702,HGNC:14534,HGNC:26165,HGNC:28879,HGNC:29930,HGNC:31918,HGNC:49420,HGNC:32255,HGNC:32270,HGNC:32271,HGNC:32262,HGNC:32266,HGNC:32264,HGNC:32256,HGNC:32265,HGNC:32267,HGNC:32257,HGNC:32258,HGNC:49396,HGNC:18086,HGNC:18087,HGNC:18088,HGNC:18115,HGNC:33342,HGNC:15967,HGNC:2767;LOEUF_bin=8,.,.,.,.,9,9,.,9,9,9,9,.,8,.,.,.,.,.,.,.,.,.,.,.,.,9,8,9,9,9,.,9;GnomAD_pLI=0.4218,.,.,.,.,1.6471e-08,0.067977,.,0.027751,0.33176,0.081151,0.29184,.,0.4218,.,.,.,.,.,.,.,.,.,.,.,.,0.32633,0.37719,0.0085821,0.093748,6.9645e-05,.,0.0011637;ExAC_pLI=0.51947,.,.,.,.,4.2486e-09,.,.,0.047238,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.43625,0.40931,0.51947,0.039012,.,0.39981;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2E_(cf_B_gain_source,_+0.00)|2L_(DEFB4A/FAM66B,_+0.00)|3A_(32_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1;END=7753583;SVLEN=584093	GT	1/.
8	56986130	.	T	<DEL>	.	PASS	AnnotSV_ID=8_56986130_57169684_DEL_1;SV_start=56986130;Biologist_annotation=VOUS_in_2017,_reclassified_in_2020;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split;CytoBand=q12.1;Gene_name=RPS20|SNORD54|CERNA3|MOS|PLAG1|CHCHD7,RPS20,SNORD54,CERNA3,MOS,PLAG1,CHCHD7;Closest_left=SNORA1B;Closest_right=SDR16C5;Gene_count=6;Tx=.,NM_001146227,NR_002437,NR_149110,NM_005372,NM_001114634,NM_001011668;Tx_version=.,3,1,1,1,2,3;Tx_start=.,56979812,56986397,56987150,57025500,57073467,57124347;Tx_end=.,56987065,56986460,56987833,57026541,57123832,57131368;Overlapped_tx_length=.,936,63,683,1041,50365,7021;Overlapped_CDS_length=.,177,0,0,1041,1503,333;Overlapped_CDS_percent=.,41,0,0,100,100,100;Frameshift=.,no,.,.,no,no,no;Exon_count=.,6,1,2,1,4,5;Location=.,txStart-intron3,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,5'UTR-CDS,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR;Dist_nearest_SS=.,124,.,.,.,.,.;Nearest_SS_type=.,5',.,.,.,.,.;Intersect_start=.,56986129,56986397,56987150,57025500,57073467,57124347;Intersect_end=.,56987065,56986460,56987833,57026541,57123832,57131368;RE_gene=LYN_(morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer);P_loss_phen=Adenomas,_salivary_gland_pleomorphic,_somatic,_181030_(3)|Silver-Russell_syndrome_4,_618907_(3)_AD|Oocyte|zygote|embryo_maturation_arrest_20,_620383_(3)_AR,.,.,.,Oocyte|zygote|embryo_maturation_arrest_20,_620383_(3)_AR,Adenomas,_salivary_gland_pleomorphic,_somatic,_181030_(3)|Silver-Russell_syndrome_4,_618907_(3)_AD,.;P_loss_source=morbid:MOS|morbid:PLAG1,.,.,.,morbid:MOS,morbid:PLAG1,.;P_loss_coord=8:57025501-57026541|8:57073468-57123832,.,.,.,8:57025501-57026541,8:57073468-57123832,.;po_P_gain_source=dbVar:nssv15169207|dbVar:nssv15128680|dbVar:nssv15161801|nssv15777239|nssv17976962|dbVar:nssv15161417|nssv15161657|dbVar:nssv15161846|dbVar:nssv15169210|dbVar:nssv15161105|dbVar:nssv15161269|dbVar:nssv15161748|dbVar:nssv15161087|dbVar:nssv15161426|dbVar:nssv15161357|dbVar:nssv15777249|dbVar:nssv15147495|dbVar:nssv15774700|dbVar:nssv15161758|dbVar:nssv15161797|dbVar:nssv15139743|dbVar:nssv15135704;po_P_gain_coord=8:10214-146293414|8:13939-146304022|8:158049-146295771|8:158050-146295771|8:158992-146280828|8:164985-146293414|8:176453-146294098|8:191531-146274835|8:191531-146280020|8:191606-146280167|8:12491000-146295771|8:21149034-146295771|8:31936552-146295771|8:36437622-60531557|8:39555658-64049089|8:46942957-70216022|8:46942963-140297737|8:53436132-65195953|8:56228415-65864987;po_P_gain_percent=0.13|0.13|0.13|0.13|0.13|0.13|0.13|0.13|0.13|0.13|0.14|0.15|0.16|0.76|0.75|0.79|0.20|1.56|1.90;po_P_loss_source=dbVar:nssv15167540|dbVar:nssv15148967|dbVar:nssv15138741|dbVar:nssv15125104|dbVar:nssv15137960|dbVar:nssv15137390|dbVar:nssv15121489|dbVar:nssv15124419;po_P_loss_coord=8:49822484-58822602|8:50384338-58738029|8:54237950-62775577|8:54407102-58403572|8:55677511-57697858|8:55733918-62058861|8:56335974-59749312|8:56405321-57358911;po_P_loss_percent=2.04|2.20|2.15|4.59|9.09|2.90|5.38|19.25;po_B_gain_someG_coord=8:57048633-57098412_1000g;po_B_loss_someG_source=chr8:56988070-56988448_dbVar|8:56988698-56989817_1000g|8:56988746-56989825_DDD:27790|chr8:56988762-56997935_dbVar|chr8:57005850-57007074_dbVar|chr8:57059737-57063078_dbVar|chr8:57160128-57168353_dbVar|chr8:57161314-57168512_dbVar;po_B_loss_someG_coord=chr8:56988017-57000275_dbVar|chr8:56988697-56989817_dbVar|chr8:56988709-56997905_dbVar|chr8:56988754-56989776_dbVar|8:56988763-56997935_1000g|chr8:57047231-57047490_dbVar|chr8:57154268-57155609_dbVar|chr8:57161113-57168156_dbVar;GC_content_left=0.41;GC_content_right=0.33;Repeat_coord_right=8:57169736-57169990;Repeat_type_right=AluSz6;HI=.,0,.,.,.,.,.;TS=.,0,.,.,.,.,.;DDD_HI_percent=78.38,29.1,.,.,78.38,15.18,47.62;ExAC_delZ=0.98432298330431,0.98432298330431,.,.,0.159444434408663,0.393657994766781,0.447428062348521;ExAC_dupZ=0.46663829854876,-0.0464637247715686,.,.,0.46663829854876,-2.53125239294469,0.400234098889925;ExAC_cnvZ=0.586548999968454,0.36681079114905,.,.,0.524682444320288,-2.47162789907313,0.586548999968454;ExAC_synZ=2.2343517715388,-0.0133102053832282,.,.,2.2343517715388,-0.349819812502603,-0.725400991144389;ExAC_misZ=2.48184869967673,2.09183372030708,.,.,2.48184869967673,1.96019845356841,-0.857804306808559;GenCC_disease=.,Diamond-Blackfan_anemia|Lynch_syndrome|familial_colorectal_cancer|familial_colorectal_cancer_type_X|hereditary_nonpolyposis_colon_cancer,.,.,oocyte/zygote/embryo_maturation_arrest_20,silver-russell_syndrome_4,.;GenCC_moi=.,AD,.,.,.,AD,.;GenCC_classification=.,Limited|Moderate|Supportive,.,.,Limited,Moderate|Strong,.;GenCC_pmid=.,24941021[PMID]|32790018[PMID],.,.,34779126|34997960|35670744,15606491|28796236|32546215,.;NCBI_gene_ID=.,6224,26795,105375847,4342,5324,79145;HGNC_gene_ID=.,HGNC:10405,HGNC:10204,HGNC:53469,HGNC:7199,HGNC:9045,HGNC:28314;OMIM_ID=190060|603026,.,.,.,190060,603026,.;OMIM_phenotype=.,.,.,.,Oocyte/zygote/embryo_maturation_arrest_20,_620383_(3)_AR,Adenomas,_salivary_gland_pleomorphic,_somatic,_181030_(3)|Silver-Russell_syndrome_4,_618907_(3)_AD,.;OMIM_inheritance=.,.,.,.,AR,AD,.;OMIM_morbid=yes,.,.,.,yes,yes,.;LOEUF_bin=0,5,.,.,3,0,6;GnomAD_pLI=0.99532,0.020686,.,.,0.58928,0.99532,0.034885;ExAC_pLI=0.82992,0.68632,.,.,0.14931,0.82992,0.38798;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(6_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5;END=57169684;SVLEN=-183555	GT	1/.
8	141035364	.	G	<DEL>	.	PASS	AnnotSV_ID=8_141035364_141061798_DEL_1;SV_start=141035364;Biologist_annotation=DI_AR;Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=q24.3;Gene_name=TRAPPC9;Closest_left=C8orf17;Closest_right=PEG13;Gene_count=1;Tx=.,NM_001160372;Tx_version=.,4;Tx_start=.,140739967;Tx_end=.,141467843;Overlapped_tx_length=.,26435;Overlapped_CDS_length=.,0;Overlapped_CDS_percent=.,0;Exon_count=.,23;Location=.,intron17-intron17;Location2=.,CDS;Dist_nearest_SS=.,1187;Nearest_SS_type=.,3';Intersect_start=.,141035363;Intersect_end=.,141061798;RE_gene=KCNK9_(morbid/RE=ABC_enhancer+GH_enhancer);po_P_gain_source=dbVar:nssv15169207|dbVar:nssv15128680|dbVar:nssv15161801|nssv15777239|nssv17976962|dbVar:nssv15161417|nssv15161657|dbVar:nssv15161846|dbVar:nssv15169210|dbVar:nssv15161105|dbVar:nssv15161269|dbVar:nssv15161748|dbVar:nssv15161087|dbVar:nssv15161426|dbVar:nssv15161357|dbVar:nssv15777249|dbVar:nssv18326351|dbVar:nssv17970300|dbVar:nssv15161337|dbVar:nssv15161103|dbVar:nssv17977109|dbVar:nssv15161374|dbVar:nssv15161674|dbVar:nssv15161669|dbVar:nssv15161791|dbVar:nssv15161680|dbVar:nssv15161065|dbVar:nssv17976072|dbVar:nssv15161091|dbVar:nssv15161853|dbVar:nssv15161352|dbVar:nssv15161104|dbVar:nssv15161722|dbVar:nssv15161428|dbVar:nssv16208199|dbVar:nssv15162410|dbVar:nssv15773510|dbVar:nssv15774288|dbVar:nssv15161330|dbVar:nssv15161750|dbVar:nssv16206976|dbVar:nssv15161266|dbVar:nssv17970325|dbVar:nssv15131822|dbVar:nssv18841906|dbVar:nssv15161331|dbVar:nssv15143620|dbVar:nssv15161849|dbVar:nssv15775349|dbVar:nssv15161867|dbVar:nssv15775091|dbVar:nssv15161075|dbVar:nssv15161551;po_P_gain_coord=8:10214-146293414|8:13939-146304022|8:158049-146295771|8:158050-146295771|8:158992-146280828|8:164985-146293414|8:176453-146294098|8:191531-146274835|8:191531-146280020|8:191606-146280167|8:12491000-146295771|8:21149034-146295771|8:31936552-146295771|8:68912433-146295771|8:70382991-146295771|8:78392287-146294098|8:79526313-146280020|8:84712254-146295771|8:86778229-146295771|8:86841155-146295771|8:86841229-142689874|8:88943381-146294098|8:93047483-141355635|8:95694383-146294042|8:96496504-146295711|8:98395102-146295771|8:98432251-146222672|8:101879572-146295771|8:104318565-146294098|8:114592632-146280020|8:114853127-146295771|8:121042468-146295771|8:121694650-146295771|8:122193547-146295771|8:125496224-146295771|8:125510740-146294098|8:125526332-146280020|8:128877996-146295771|8:129233159-146274835|8:130863094-146295771|8:131127765-142238309|8:131138344-143473913|8:131651429-146294098|8:131682564-146280020|8:134825278-146280828|8:136059860-146295771|8:136378790-146295771|8:139188798-146295771|8:140016462-146274835|8:140249068-146294098;po_P_gain_percent=0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.03|0.03|0.04|0.04|0.04|0.04|0.04|0.05|0.05|0.05|0.05|0.05|0.06|0.06|0.06|0.06|0.08|0.08|0.10|0.11|0.11|0.13|0.13|0.13|0.15|0.16|0.17|0.24|0.21|0.18|0.18|0.23|0.26|0.27|0.37|0.42|0.44;po_P_loss_phen=Intellectual_developmental_disorder,_AR_13,_613192_(3)_AR;po_P_loss_source=dbVar:nssv16208202|dbVar:nssv15127815|morbid:TRAPPC9;po_P_loss_coord=8:126892815-143750028|8:127638607-144388560|8:140739968-141468678;po_P_loss_percent=0.16|0.16|3.63;B_loss_source=dbVar;B_loss_coord=chr8:140980774-141135131;B_loss_AFmax=0.01;po_B_loss_someG_source=chr8:141040435-141042904_dbVar;po_B_loss_someG_coord=chr8:140980774-141135131_dbVar;GC_content_left=0.535;GC_content_right=0.38;Repeat_coord_left=8:141035378-141035461|8:141035462-141035486;Repeat_type_left=MER58C|(CAAAA)n;HI=.,30;TS=.,0;DDD_HI_percent=53.39;ExAC_delZ=0.107633755409335;ExAC_dupZ=-1.97676981971355;ExAC_cnvZ=-1.34878674017516;ExAC_synZ=-0.190632175596259;ExAC_misZ=1.58912949219012;GenCC_disease=.,autosomal_recessive_non-syndromic_intellectual_disability|intellectual_disability,_autosomal_recessive_13|intellectual_disability-obesity-brain_malformations-facial_dysmorphism_syndrome;GenCC_moi=.,AR;GenCC_classification=.,Definitive|Moderate|Strong|Supportive;GenCC_pmid=.,2000476|20004763|20004764|20004765|20004765[PMID]_20004763[PMID]_20004765[PMID]|22549410|22549410[PMID];NCBI_gene_ID=.,83696;HGNC_gene_ID=.,HGNC:30832;OMIM_ID=611966;OMIM_phenotype=.,Intellectual_developmental_disorder,_AR_13,_613192_(3)_AR;OMIM_inheritance=.,AR;OMIM_morbid=yes;LOEUF_bin=3;GnomAD_pLI=2.2898e-14;ExAC_pLI=5.7604e-06;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=141061798;SVLEN=-26435	GT	1/.
10	46976158	.	G	<DUP>	.	PASS	AnnotSV_ID=10_46976158_47590995_DUP_1;SV_start=46976158;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split;CytoBand=q11.22;Gene_name=GPRIN2|NPY4R|LINC00842|HNRNPA1P33|ANXA8L1|FAM25BP|AGAP14P|SHLD2P3|ANTXRLP1,GPRIN2,NPY4R,LINC00842,HNRNPA1P33,ANXA8L1,FAM25BP,AGAP14P,SHLD2P3,ANTXRLP1;Closest_left=SYT15;Closest_right=LOC105378577;Gene_count=9;Tx=.,NM_001385287,NM_001278794,NR_033957,NR_003277,NM_001098845,NR_104039,NR_165820,NR_027634,NR_103827;Tx_version=.,1,2,2,2,3,1,1,1,1;Tx_start=.,46992020,47083456,47096453,47133334,47157988,47177206,47192907,47379719,47590260;Tx_end=.,47007881,47088320,47151400,47133898,47173994,47181688,47213477,47421238,47640844;Overlapped_tx_length=.,15861,4864,54947,564,16006,4482,20570,41519,735;Overlapped_CDS_length=.,1449,1128,0,0,984,0,0,0,0;Overlapped_CDS_percent=.,100,73,0,0,100,0,0,0,0;Frameshift=.,no,no,.,.,no,.,.,.,.;Exon_count=.,4,2,4,1,12,3,8,7,5;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,intron4-txEnd;Location2=.,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR;Dist_nearest_SS=.,.,.,.,.,.,.,.,.,53;Nearest_SS_type=.,.,.,.,.,.,.,.,.,3';Intersect_start=.,46992020,47083456,47096453,47133334,47157988,47177206,47192907,47379719,47590260;Intersect_end=.,47007881,47088320,47151400,47133898,47173994,47181688,47213477,47421238,47590995;RE_gene=GDF2_(morbid/RE=ABC_enhancer);po_P_gain_source=dbVar:nssv15171419|dbVar:nssv15161644|dbVar:nssv15171420|dbVar:nssv15161671|dbVar:nssv15161670|nssv15161864|dbVar:nssv18830975|dbVar:nssv15148987|dbVar:nssv15146649|dbVar:nssv15148014|dbVar:nssv15147999|dbVar:nssv15127252|dbVar:nssv15149138|dbVar:nssv15160810|dbVar:nssv15153822|dbVar:nssv18329611|dbVar:nssv15157044|dbVar:nssv15774462;po_P_gain_coord=10:73233-135524321|10:93298-135378918|10:98088-135477883|10:100027-50961640|10:100028-135427143|10:11138693-135427143|10:42607636-69160433|10:42890650-52636819|10:43180755-75475666|10:43379743-54025077|10:43957497-55681185|10:46242058-51595050|10:46591858-51028871|10:46966534-51822386|10:46966535-51903756|10:47049548-51903662|10:47148814-51626260;po_P_gain_percent=0.45|0.45|0.45|1.21|0.45|0.49|2.32|6.31|1.90|5.78|5.24|11.49|13.86|12.66|12.45|11.15|9.88;po_P_loss_source=dbVar:nssv18830989|dbVar:nssv18792766|dbVar:nssv15148974|dbVar:nssv15147055|dbVar:nssv15147325|dbVar:nssv15149769|dbVar:nssv15153824|dbVar:nssv15775323|dbVar:nssv18330284|dbVar:nssv18842061|dbVar:nssv18326311|dbVar:nssv15152293|dbVar:nssv15147381|dbVar:nssv15149118|dbVar:nssv15148000|dbVar:nssv15148874|dbVar:nssv15605856|dbVar:nssv17976988|dbVar:nssv16252224|dbVar:nssv15153821|dbVar:nssv15155360|dbVar:nssv15153823|nssv15775280|dbVar:nssv15149894|dbVar:nssv18330270|dbVar:nssv15151095|dbVar:nssv15150620|dbVar:nssv16596271|dbVar:nssv16254627;po_P_loss_coord=10:12829207-135427143|10:46200157-51028871|10:46205691-51330432|10:46205691-51911085|10:46205697-51724915|10:46224447-51594991|10:46225365-51874356|10:46235358-51874163|10:46269494-51874356|10:46284270-51870080|10:46287822-51627470|10:46287822-51861565|10:46476966-51724915|10:46491170-51081560|10:46491170-51594991|10:46491170-51664079|10:46544811-51743471|10:46576516-51680164|10:46964974-51826226|10:46966534-51700837|10:46966534-51874356|10:46966534-51903755|10:46966534-51903756|10:46966535-51700837|10:46966535-51822386|10:46966535-51903756|10:46966536-51874356|10:47132306-51627470;po_P_loss_percent=0.50|12.73|12.00|10.78|11.14|11.45|10.88|10.90|10.97|11.01|11.51|11.03|11.72|13.39|12.05|11.89|11.83|12.05|12.65|12.99|12.53|12.45|12.45|12.99|12.66|12.45|12.53|10.20;B_gain_source=DDD:32922|dgv221e212|dgv24e55|nsv516485,1000g|DDD:32922|DDD:32934|DDD:32936|DDD:32937|dgv116e214|dgv221e212|dgv22e55|dgv24e55|nsv516485,DDD:32922|DDD:32934|DDD:32936|DDD:32937|dgv221e212|dgv22e55|dgv24e55|nsv516485,DDD:32922|DDD:32936|DDD:32937|dgv221e212|dgv24e55|nsv516485,1000g|DDD:32922|DDD:32934|DDD:32936|DDD:32937|dgv118e214|dgv221e212|dgv22e55|dgv24e55|nsv516485,DDD:32922|DDD:32936|DDD:32937|dgv221e212|dgv24e55|nsv516485,DDD:32922|DDD:32936|DDD:32937|dgv221e212|dgv24e55|nsv516485,DDD:32922|DDD:32936|dgv221e212|dgv24e55|nsv516485,DDD:32922|dgv221e212|dgv24e55|nsv516485,1000g|DDD:32922|DDD:32970|DDD:32972|TS40:ISCA-46639|dgv120e214|dgv221e212|dgv24e55|dgv85n27|esv2421526|gnomAD-SV_v2.1_DUP_10_29734|nsv516485;B_gain_coord=10:46109534-48312291|10:46416327-47756284|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46923704-47138897|10:46931463-47389066|10:46931470-47201116|10:46943378-47136996|10:46943378-47742094|10:46966535-48298893|10:46976293-47023561|10:46976293-47023561|10:46976293-47023561|10:46976293-47023561,10:46109534-48312291|10:46416327-47756284|10:46923704-47138897|10:46931463-47389066|10:46931470-47201116|10:46943378-47136996|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46931463-47389066|10:46931470-47201116|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46923704-47138897|10:46931463-47389066|10:46931470-47201116|10:46943378-47136996|10:46943378-47742094|10:46966535-48298893|10:47089973-47150813|10:47089973-47150813|10:47089973-47150813|10:47089973-47150813,10:46109534-48312291|10:46416327-47756284|10:46931463-47389066|10:46931470-47201116|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46931463-47389066|10:46931470-47201116|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46931463-47389066|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46943378-47742094|10:46966535-48298893|10:47531023-47599037|10:47531023-47599037|10:47531764-47597768|10:47537369-47652803|10:47539193-47885867|10:47543323-47703613|10:47545737-47759694|10:47585775-47727500;B_gain_AFmax=0.11,0.9544,0.11,0.11,0.9544,0.11,0.11,0.11,0.11,0.11;B_loss_source=DDD:32922|dgv23e55|nsv516485,DDD:32922|DDD:32937|dgv23e55|nsv516485,DDD:32922|DDD:32937|dgv23e55|nsv516485,DDD:32922|DDD:32937|dgv23e55|nsv516485,DDD:32922|DDD:32937|dgv23e55|nsv516485,DDD:32922|DDD:32937|dgv23e55|esv2663732|nsv516485,DDD:32922|DDD:32937|dgv23e55|esv2663732|nsv516485,DDD:32922|dgv23e55|esv2663732|nsv516485,DDD:32922|dgv23e55|nsv516485,1000g|DDD:32922|dbVar|dgv23e55|esv2421526|esv3623125|gnomAD-SV_v2.1_DEL_10_110010|nsv516485;B_loss_coord=10:46109534-48312291|10:46416327-47756284|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094|10:47150446-47326492,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094|10:47150446-47326492,10:46109534-48312291|10:46416327-47756284|10:46943378-47742094|10:47150446-47326492,10:46109534-48312291|10:46416327-47756284|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46943378-47742094|chr10:47531022-47599037|10:47531023-47599037|10:47531023-47599037|10:47537369-47652803|chr10:47582000-47654100|10:47582000-47654100|chr10:47585000-47706000;B_loss_AFmax=0.026,0.026,0.026,0.026,0.026,0.04,0.04,0.04,0.026,0.0318;B_inv_source=IMH;B_inv_coord=10:46257220-51811936;B_inv_AFmax=0.0179;po_B_gain_someG_source=10:46416327-47756284_DDD:32922|10:46931463-47389066_DDD:32936|10:46943378-47136996_dgv22e55|10:46966535-48298893_dgv221e212|10:46976293-47023561_1000g|10:46976293-47023561_dgv116e214|10:47007971-47086710_1000g|10:47007971-47086710_dgv117e214|10:47089973-47150813_1000g|10:47089973-47150813_dgv118e214|10:47321000-47396000_gnomAD-SV_v2.1_DUP_10_29724|10:47383858-47395064_1000g|10:47383858-47395064_dgv119e214|10:47394950-47400600_gnomAD-SV_v2.1_DUP_10_29727|10:47424000-47429050_gnomAD-SV_v2.1_DUP_10_29730|10:47531023-47599037_1000g|10:47531764-47597768_TS40:ISCA-46639|10:47537369-47652803_esv2421526|10:47543323-47703613_dgv85n27|10:47565000-47570000_gnomAD-SV_v2.1_DUP_10_29733...;po_B_gain_someG_coord=10:46109534-48312291_nsv516485|10:46923704-47138897_DDD:32934|10:46931470-47201116_DDD:32937|10:46943378-47742094_dgv24e55|10:46976293-47023561_1000g|10:46976293-47023561_1000g|10:47007971-47086710_1000g|10:47007971-47086710_1000g|10:47089973-47150813_1000g|10:47089973-47150813_1000g|10:47150450-47160300_gnomAD-SV_v2.1_DUP_10_29721|10:47370500-47380000_gnomAD-SV_v2.1_DUP_10_29725|10:47383858-47395064_1000g|10:47389000-47395000_gnomAD-SV_v2.1_DUP_10_29726|10:47412000-47429100_gnomAD-SV_v2.1_DUP_10_29729|10:47530000-47578125_gnomAD-SV_v2.1_DUP_10_29731|10:47531023-47599037_dgv120e214|10:47534700-47555100_gnomAD-SV_v2.1_DUP_10_29732|10:47539193-47885867_DDD:32970|10:47545737-47759694_DDD:32972...;po_B_loss_someG_source=10:46416327-47756284_DDD:32922|10:46943378-47742094_dgv23e55|chr10:47009185-47009299_dbVar|10:47036095-47036306_IMH|chr10:47083158-47083218_dbVar|10:47083161-47083233_gnomAD-SV_v2.1_DEL_10_109994|chr10:47088385-47088703_dbVar|chr10:47120109-47120186_dbVar|chr10:47148773-47150391_dbVar|10:47148774-47150391_esv3623121|10:47172000-47177000_HI40:ISCA-46432|10:47177700-47182800_HI40:ISCA-46433|10:47191200-47201400_HI40:ISCA-46434|10:47211300-47216400_HI40:ISCA-46435|chr10:47241600-47251000_dbVar|10:47252000-47271150_gnomAD-SV_v2.1_DEL_10_110003|10:47275450-47281000_gnomAD-SV_v2.1_DEL_10_110005|10:47301450-47315100_gnomAD-SV_v2.1_DEL_10_110006|chr10:47531022-47599037_dbVar|10:47531023-47599037_esv3623125...;po_B_loss_someG_coord=10:46109534-48312291_nsv516485|10:46931470-47201116_DDD:32937|chr10:47003380-47003486_dbVar|10:47009185-47009299_gnomAD-SV_v2.1_DEL_10_109993|10:47036095-47036306_esv2665191|chr10:47083161-47083233_dbVar|chr10:47088375-47088703_dbVar|10:47088385-47088703_gnomAD-SV_v2.1_DEL_10_109995|chr10:47141536-47141802_dbVar|10:47148774-47150391_1000g|10:47150446-47326492_esv2663732|chr10:47172000-47177000_dbVar|chr10:47177700-47182800_dbVar|chr10:47191200-47201400_dbVar|chr10:47211300-47216400_dbVar|chr10:47252000-47271150_dbVar|chr10:47275450-47281000_dbVar|chr10:47301450-47315100_dbVar|chr10:47383857-47395064_dbVar|10:47531023-47599037_1000g...;GC_content_left=0.415;GC_content_right=0.5;Repeat_coord_left=10:46976181-46976437;Repeat_type_left=LTR78;SegDup_right=10:47590101-47594293|10:47590101-47594293;DDD_HI_percent=89.5,82.54,66.73,.,.,75.66,89.5,.,.,.;ExAC_synZ=-2.98697085794417,-3.10473776124822,-2.98697085794417,.,.,.,.,.,.,.;ExAC_misZ=-2.90416172871297,-3.32991530871711,-2.90416172871297,.,.,.,.,.,.,.;NCBI_gene_ID=.,9721,5540,643650,728643,728113,100132929,653259,439965,100996567;HGNC_gene_ID=.,HGNC:23730,HGNC:9329,HGNC:44989,HGNC:44990,HGNC:23334,HGNC:23584,HGNC:23660,HGNC:34038,HGNC:45004;LOEUF_bin=8,8,8,.,.,9,.,.,.,.;GnomAD_pLI=0.33439,3.8557e-06,8.2144e-07,.,.,0.33439,.,.,.,.;ExAC_pLI=0.00029629,0.00029629,6.116e-09,.,.,.,.,.,.,.;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2E_(cf_B_gain_source,_+0.00)|2L_(ANTXRLP1,_+0.00)|3A_(9_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1;END=47590995;SVLEN=614838	GT	1/.
11	66287089	.	C	<DEL>	.	PASS	AnnotSV_ID=11_66287089_66288847_DEL_1;SV_start=66287089;Biologist_annotation=BBS1_internal_frameshift;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split;CytoBand=q13.2;Gene_name=BBS1|ZDHHC24,BBS1,ZDHHC24;Closest_left=DPP3;Closest_right=ACTN3;Gene_count=2;Tx=.,NM_024649,NM_001348571;Tx_version=.,5,2;Tx_start=.,66278105,66288095;Tx_end=.,66301069,66313519;Overlapped_tx_length=.,1759,752;Overlapped_CDS_length=.,238,0;Overlapped_CDS_percent=.,13,0;Frameshift=.,yes,.;Exon_count=.,17,5;Location=.,exon8-intron9,exon5-txEnd;Location2=.,CDS,3'UTR;Dist_nearest_SS=.,0,90;Nearest_SS_type=.,5',3';Intersect_start=.,66287088,66288095;Intersect_end=.,66288847,66288847;RE_gene=BANF1_(morbid/RE=EA_enhancer)|CATSPER1_(morbid/RE=EA_enhancer)|CTSF_(morbid/RE=EA_enhancer)|FIBP_(morbid/RE=EA_enhancer)|KLC2_(morbid/RE=EA_enhancer)|PACS1_(morbid/RE=EA_enhancer)|PC_(morbid/RE=EA_enhancer)|SF3B2_(morbid/RE=EA_enhancer)|SPTBN2_(morbid/RE=EA_enhancer)|TMEM151A_(morbid/RE=EA_enhancer);po_P_gain_source=dbVar:nssv15171978|dbVar:nssv15158476|dbVar:nssv15150306|nssv15150623|dbVar:nssv17976763|dbVar:nssv15150659|dbVar:nssv15605814|dbVar:nssv15146474|dbVar:nssv17973682;po_P_gain_coord=11:70865-134938470|11:198511-134934063|11:230617-134938470|11:32799482-134938470|11:64501920-67129258|11:65138977-67574402|11:65960974-67658241|11:66281868-66288857;po_P_gain_percent=0.00|0.00|0.00|0.00|0.07|0.07|0.10|25.16;po_P_loss_phen=Bardet-Biedl_syndrome_1,_209900_(3)_Digenic_recessive,AR;po_P_loss_source=dbVar:nssv16867095|dbVar:nssv15148225|dbVar:nssv15129970|dbVar:nssv18792809|morbid:BBS1|dbVar:nssv16214536|dbVar:nssv17171795|dbVar:nssv16212285|dbVar:nssv17976607|dbVar:nssv17974991|dbVar:nssv17172605|dbVar:nssv16212781|dbVar:nssv18787680|dbVar:nssv15128612|dbVar:nssv17172606;po_P_loss_coord=11:11835570-118373112|11:65508903-67473140|11:66274841-66292574|11:66274871-66292647|11:66278106-66301069|11:66278112-66291373|11:66278112-66299528|11:66278122-66291682|11:66278712-66293593|11:66283002-66287229|11:66283155-66287229|11:66287079-66288857|11:66287079-66291105|11:66288384-66293649|11:66288722-66293683;po_P_loss_percent=0.00|0.09|9.92|9.89|7.66|13.26|8.21|12.97|11.82|3.33|3.46|98.88|43.68|8.81|2.54;P_snvindel_nb=14,14,7;P_snvindel_phen=BBS1-related_disorder|Bardet-Biedl_syndrome|Bardet-Biedl_syndrome_1|Retinal_dystrophy;B_inv_source=IMH;B_inv_coord=11:1642920-71249653|11:49233128-89368291|11:49425032-89029881|11:49425381-89029675|11:49580506-88798755|11:49652145-88728247|11:50025478-108975588;B_inv_AFmax=0.432;GC_content_left=0.565;GC_content_right=0.545;DDD_HI_percent=67.28,40.7,67.28;ExAC_delZ=-0.648300458519823,-0.648300458519823,-1.23986898178133;ExAC_dupZ=0.663432885116562,0.663432885116562,0.616417349113344;ExAC_cnvZ=0.155145712015149,0.155145712015149,-0.188374414893838;ExAC_synZ=0.635599914039232,0.0819191978639822,0.635599914039232;ExAC_misZ=1.04727080312339,0.0377121632347663,1.04727080312339;GenCC_disease=.,Bardet-Biedl_syndrome|Bardet-Biedl_syndrome_1|ciliopathy,.;GenCC_moi=.,AR,.;GenCC_classification=.,Definitive|Strong|Supportive,.;GenCC_pmid=.,10577921|10577922|12118255|18032602|20301537[PMID]|20498079,.;NCBI_gene_ID=.,582,254359;HGNC_gene_ID=.,HGNC:966,HGNC:27387;OMIM_ID=209901,209901,.;OMIM_phenotype=.,Bardet-Biedl_syndrome_1,_209900_(3)_Digenic_recessive,AR,.;OMIM_inheritance=.,Digenic_recessive,AR,.;OMIM_morbid=yes,yes,.;LOEUF_bin=5,5,7;GnomAD_pLI=0.0004208,3.4063e-12,0.0004208;ExAC_pLI=0.0061403,1.7787e-07,0.0061403;AnnotSV_ranking_score=0.9;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2E-1_(BBS1,_+0.90)|3A_(2_genes,_+0.00)|5F_(+0.00);ACMG_class=4,full=4,full=4;END=66288847;SVLEN=-1759	GT	1/.
12	63935482	.	C	<DEL>	.	PASS	AnnotSV_ID=12_63935482_64130626_DEL_1;SV_start=63935482;Biologist_annotation=DPY19L2_(both_DEL_and_DUP_LCR_mediated,_precise_breakpoints);Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=q14.2;Gene_name=DPY19L2;Closest_left=AVPR1A;Closest_right=RXYLT1;Gene_count=1;Tx=.,NM_173812;Tx_version=.,5;Tx_start=.,63952692;Tx_end=.,64062273;Overlapped_tx_length=.,109581;Overlapped_CDS_length=.,2277;Overlapped_CDS_percent=.,100;Frameshift=.,no;Exon_count=.,22;Location=.,txStart-txEnd;Location2=.,5'UTR-3'UTR;Intersect_start=.,63952692;Intersect_end=.,64062273;RE_gene=RXYLT1_(morbid/RE=GH_enhancer+GH_promoter)|TBK1_(morbid/RE=EA_enhancer);P_loss_phen=Spermatogenic_failure_9,_613958_(3)_AR;P_loss_source=dbVar:nssv15119764|dbVar:nssv16213932|morbid:DPY19L2,dbVar:nssv16213932|morbid:DPY19L2;P_loss_coord=12:63952693-64062273|12:63952694-64062354|12:63989747-63989817,12:63952693-64062273|12:63989747-63989817;po_P_gain_source=dbVar:nssv15161620|dbVar:nssv15161414|nssv15161422|dbVar:nssv15171852|dbVar:nssv15161798|dbVar:nssv15171855;po_P_gain_coord=12:2-133851895|12:173788-133777902|12:191620-133777645|12:282466-133773393|12:621221-133779118;po_P_gain_percent=0.15|0.15|0.15|0.15|0.15;po_P_loss_source=dbVar:nssv15136921;po_P_loss_coord=12:61300933-66961857;po_P_loss_percent=3.45;P_snvindel_nb=1;P_snvindel_phen=Spermatogenic_failure_9;B_gain_source=.,1000g|DDD:38888|esv3629757|gnomAD-SV_v2.1_DUP_12_34997;B_gain_coord=.,12:63936386-64131550|12:63939159-64117235|12:63939159-64117235|12:63940549-64135811;B_gain_AFmax=.,0.0257;B_loss_source=.,dbVar;B_loss_coord=.,chr12:63923277-64119251|chr12:63939158-64117235|chr12:63946269-64141505;B_loss_AFmax=.,0.01;B_inv_source=IMH;B_inv_coord=12:11501488-96031049|12:40933234-113477160;B_inv_AFmax=0.107;po_B_gain_someG_source=12:63939159-64117235_1000g|12:63940549-64135811_DDD:38888|12:64069043-64136500_dgv280e214|12:63939159-64117235_1000g|12:63940549-64135811_DDD:38888|12:64069043-64136500_dgv280e214;po_B_gain_someG_coord=12:63936386-64131550_gnomAD-SV_v2.1_DUP_12_34997|12:63939159-64117235_esv3629757|12:64020291-64020367_DDD:38896|12:63936386-64131550_gnomAD-SV_v2.1_DUP_12_34997|12:63939159-64117235_esv3629757|12:64020291-64020367_DDD:38896;po_B_loss_someG_source=chr12:63936000-63986000_dbVar|chr12:63946269-64141505_dbVar|chr12:63946732-63946956_dbVar|12:63946733-63946956_IMH|chr12:63959839-63959910_dbVar|12:64020291-64020367_DDD:38896|chr12:64069257-64069348_dbVar|chr12:64076528-64076585_dbVar|chr12:64116494-64116881_dbVar|chr12:63923277-64119251_dbVar|chr12:63939158-64117235_dbVar|12:63946730-63946956_esv2662353|12:63946732-63946956_gnomAD-SV_v2.1_DEL_12_129265|chr12:63950172-63950241_dbVar|chr12:64015848-64018740_dbVar|chr12:64065000-64130000_dbVar|chr12:64069869-64069961_dbVar|chr12:64103835-64106468_dbVar|chr12:64122000-64127000_dbVar;po_B_loss_someG_coord=chr12:63923277-64119251_dbVar|chr12:63939158-64117235_dbVar|12:63946730-63946956_esv2662353|12:63946732-63946956_gnomAD-SV_v2.1_DEL_12_129265|chr12:63950172-63950241_dbVar|chr12:64015848-64018740_dbVar|chr12:64065000-64130000_dbVar|chr12:64069869-64069961_dbVar|chr12:64103835-64106468_dbVar|chr12:64122000-64127000_dbVar|chr12:63936000-63986000_dbVar|chr12:63946269-64141505_dbVar|chr12:63946732-63946956_dbVar|12:63946733-63946956_IMH|chr12:63959839-63959910_dbVar|12:64020291-64020367_DDD:38896|chr12:64069257-64069348_dbVar|chr12:64076528-64076585_dbVar|chr12:64116494-64116881_dbVar;GC_content_left=0.53;GC_content_right=0.43;Repeat_coord_left=12:63935369-63935656;Repeat_type_left=AluSq2;Repeat_coord_right=12:64130409-64130696;Repeat_type_right=AluSq2;SegDup_left=12:63923419-63951619;SegDup_right=12:64119249-64146247;DDD_HI_percent=81.13;ExAC_synZ=1.02618176351368;ExAC_misZ=1.66555804568279;GenCC_disease=.,male_infertility_due_to_globozoospermia|spermatogenic_failure_9;GenCC_moi=.,AR;GenCC_classification=.,Strong|Supportive;GenCC_pmid=.,17008355|21397063|21397063[PMID]_22571172[PMID]|21397064|22627659|22653751|25755131|25780569;NCBI_gene_ID=.,283417;HGNC_gene_ID=.,HGNC:19414;OMIM_ID=613893;OMIM_phenotype=.,Spermatogenic_failure_9,_613958_(3)_AR;OMIM_inheritance=.,AR;OMIM_morbid=yes;LOEUF_bin=4;GnomAD_pLI=1.0936e-13;ExAC_pLI=7.0294e-05;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=5,full=5;END=64130626;SVLEN=-195145	GT	1/.
12	63935482	.	C	<DUP>	.	PASS	AnnotSV_ID=12_63935482_64130626_DUP_1;SV_start=63935482;Biologist_annotation=DPY19L2_(both_DEL_and_DUP_LCR_mediated,_precise_breakpoints);Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=q14.2;Gene_name=DPY19L2;Closest_left=AVPR1A;Closest_right=RXYLT1;Gene_count=1;Tx=.,NM_173812;Tx_version=.,5;Tx_start=.,63952692;Tx_end=.,64062273;Overlapped_tx_length=.,109581;Overlapped_CDS_length=.,2277;Overlapped_CDS_percent=.,100;Frameshift=.,no;Exon_count=.,22;Location=.,txStart-txEnd;Location2=.,5'UTR-3'UTR;Intersect_start=.,63952692;Intersect_end=.,64062273;RE_gene=RXYLT1_(morbid/RE=GH_enhancer+GH_promoter)|TBK1_(morbid/RE=EA_enhancer);P_loss_phen=Spermatogenic_failure_9,_613958_(3)_AR;P_loss_source=dbVar:nssv15119764|dbVar:nssv16213932|morbid:DPY19L2,dbVar:nssv16213932|morbid:DPY19L2;P_loss_coord=12:63952693-64062273|12:63952694-64062354|12:63989747-63989817,12:63952693-64062273|12:63989747-63989817;po_P_gain_source=dbVar:nssv15161620|dbVar:nssv15161414|nssv15161422|dbVar:nssv15171852|dbVar:nssv15161798|dbVar:nssv15171855;po_P_gain_coord=12:2-133851895|12:173788-133777902|12:191620-133777645|12:282466-133773393|12:621221-133779118;po_P_gain_percent=0.15|0.15|0.15|0.15|0.15;po_P_loss_source=dbVar:nssv15136921;po_P_loss_coord=12:61300933-66961857;po_P_loss_percent=3.45;P_snvindel_nb=1;P_snvindel_phen=Spermatogenic_failure_9;B_gain_source=.,1000g|DDD:38888|esv3629757|gnomAD-SV_v2.1_DUP_12_34997;B_gain_coord=.,12:63936386-64131550|12:63939159-64117235|12:63939159-64117235|12:63940549-64135811;B_gain_AFmax=.,0.0257;B_loss_source=.,dbVar;B_loss_coord=.,chr12:63923277-64119251|chr12:63939158-64117235|chr12:63946269-64141505;B_loss_AFmax=.,0.01;B_inv_source=IMH;B_inv_coord=12:11501488-96031049|12:40933234-113477160;B_inv_AFmax=0.107;po_B_gain_someG_source=12:63939159-64117235_1000g|12:63940549-64135811_DDD:38888|12:64069043-64136500_dgv280e214|12:63939159-64117235_1000g|12:63940549-64135811_DDD:38888|12:64069043-64136500_dgv280e214;po_B_gain_someG_coord=12:63936386-64131550_gnomAD-SV_v2.1_DUP_12_34997|12:63939159-64117235_esv3629757|12:64020291-64020367_DDD:38896|12:63936386-64131550_gnomAD-SV_v2.1_DUP_12_34997|12:63939159-64117235_esv3629757|12:64020291-64020367_DDD:38896;po_B_loss_someG_source=chr12:63936000-63986000_dbVar|chr12:63946269-64141505_dbVar|chr12:63946732-63946956_dbVar|12:63946733-63946956_IMH|chr12:63959839-63959910_dbVar|12:64020291-64020367_DDD:38896|chr12:64069257-64069348_dbVar|chr12:64076528-64076585_dbVar|chr12:64116494-64116881_dbVar|chr12:63923277-64119251_dbVar|chr12:63939158-64117235_dbVar|12:63946730-63946956_esv2662353|12:63946732-63946956_gnomAD-SV_v2.1_DEL_12_129265|chr12:63950172-63950241_dbVar|chr12:64015848-64018740_dbVar|chr12:64065000-64130000_dbVar|chr12:64069869-64069961_dbVar|chr12:64103835-64106468_dbVar|chr12:64122000-64127000_dbVar;po_B_loss_someG_coord=chr12:63923277-64119251_dbVar|chr12:63939158-64117235_dbVar|12:63946730-63946956_esv2662353|12:63946732-63946956_gnomAD-SV_v2.1_DEL_12_129265|chr12:63950172-63950241_dbVar|chr12:64015848-64018740_dbVar|chr12:64065000-64130000_dbVar|chr12:64069869-64069961_dbVar|chr12:64103835-64106468_dbVar|chr12:64122000-64127000_dbVar|chr12:63936000-63986000_dbVar|chr12:63946269-64141505_dbVar|chr12:63946732-63946956_dbVar|12:63946733-63946956_IMH|chr12:63959839-63959910_dbVar|12:64020291-64020367_DDD:38896|chr12:64069257-64069348_dbVar|chr12:64076528-64076585_dbVar|chr12:64116494-64116881_dbVar;GC_content_left=0.53;GC_content_right=0.43;Repeat_coord_left=12:63935369-63935656;Repeat_type_left=AluSq2;Repeat_coord_right=12:64130409-64130696;Repeat_type_right=AluSq2;SegDup_left=12:63923419-63951619;SegDup_right=12:64119249-64146247;DDD_HI_percent=81.13;ExAC_synZ=1.02618176351368;ExAC_misZ=1.66555804568279;GenCC_disease=.,male_infertility_due_to_globozoospermia|spermatogenic_failure_9;GenCC_moi=.,AR;GenCC_classification=.,Strong|Supportive;GenCC_pmid=.,17008355|21397063|21397063[PMID]_22571172[PMID]|21397064|22627659|22653751|25755131|25780569;NCBI_gene_ID=.,283417;HGNC_gene_ID=.,HGNC:19414;OMIM_ID=613893;OMIM_phenotype=.,Spermatogenic_failure_9,_613958_(3)_AR;OMIM_inheritance=.,AR;OMIM_morbid=yes;LOEUF_bin=4;GnomAD_pLI=1.0936e-13;ExAC_pLI=7.0294e-05;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2G_(cf_po_B_gain_someG_source,_+0.00)|2H-2_(DPY19L2,_+0.00)|3A_(1_gene,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=3,full=3;END=64130626;SVLEN=195145	GT	1/.
14	22323880	.	T	<DEL>	.	PASS	AnnotSV_ID=14_22323880_22952279_DEL_1;SV_start=22323880;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=q11.2;Gene_name=TRD-AS1;Closest_left=OR4E1;Closest_right=LINC02332;Gene_count=1;Tx=.,NR_148361;Tx_version=.,1;Tx_start=.,22847807;Tx_end=.,22951948;Overlapped_tx_length=.,104141;Overlapped_CDS_length=.,0;Overlapped_CDS_percent=.,0;Exon_count=.,5;Location=.,txStart-txEnd;Location2=.,UTR;Intersect_start=.,22847807;Intersect_end=.,22951948;RE_gene=CHD8_(HI=3/morbid/RE=GH_enhancer+GH_promoter_enhancer)|MMP14_(morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer)|PABPN1_(morbid/RE=GH_enhancer+GH_promoter_enhancer)|SLC7A7_(morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer)|SUPT16H_(morbid/RE=GH_enhancer+GH_promoter_enhancer);po_P_gain_source=dbVar:nssv15162475|dbVar:nssv15606090|dbVar:nssv15161908|dbVar:nssv15162476|dbVar:nssv15161629|dbVar:nssv15139565|dbVar:nssv15141262|dbVar:nssv15146564|dbVar:nssv15146758|dbVar:nssv16207193|dbVar:nssv17976958|dbVar:nssv15148269|dbVar:nssv15161107|nssv15161424|dbVar:nssv15161067|dbVar:nssv15132618|dbVar:nssv15134537|dbVar:nssv17955846|dbVar:nssv16091748;po_P_gain_coord=14:19000423-107289053|14:19100683-28730087|14:19280734-107287663|14:19327824-107287663|14:19794562-107234280|14:19794562-27768254|14:19794562-34049214|14:20468771-39453619|14:20490853-44562875|14:20511673-44829030|14:20511673-47481203|14:20511673-49111245|14:20511674-107285437|14:20619309-107263478|14:20619309-23911404|14:20880747-25487326|14:20925966-23649548|14:21717094-24027220;po_P_gain_percent=0.71|6.53|0.71|0.71|0.72|7.88|4.41|3.31|2.61|2.58|2.33|2.20|0.72|0.73|19.09|13.64|23.07|27.20;po_P_loss_source=dbVar:nssv15119819|dbVar:nssv15145699|dbVar:nssv18330314|dbVar:nssv16208379|dbVar:nssv17976070;po_P_loss_coord=14:20223409-23210490|14:20665105-45754005|14:20690197-23114522|14:21143934-23297667|14:21162264-50713602;po_P_loss_percent=21.04|2.50|25.92|29.18|2.13;B_gain_source=TS40:ISCA-37476,TS40:ISCA-37476|dgv594e212|dgv598e212;B_gain_coord=14:22111110-23021097,14:22111110-23021097|14:22420175-22995788|14:22558879-22977816;B_gain_AFmax=.,0.02;B_loss_source=HI40:ISCA-37476,DDD:42190|HI40:ISCA-37476|dgv599e212;B_loss_coord=14:22111110-23021097,14:22111110-23021097|14:22549070-22959340|14:22558879-22995788;B_loss_AFmax=.,0.0107;po_B_gain_someG_source=14:22420175-22995788_dgv594e212|14:22824113-22824253_IMH;po_B_gain_someG_coord=14:22111110-23021097_TS40:ISCA-37476|14:22558879-22977816_dgv598e212;po_B_loss_someG_source=chr14:22203999-22380000_dbVar|chr14:22377253-22379001_dbVar|chr14:22386251-22387140_dbVar|chr14:22401118-22401214_dbVar|chr14:22451362-22451480_dbVar|14:22506096-22519924_dgv596e212|chr14:22522033-22522131_dbVar|chr14:22557093-22558668_dbVar|chr14:22566919-22569163_dbVar|chr14:22578988-22580660_dbVar|chr14:22582707-22583756_dbVar|14:22582708-22583756_DDD:42194|14:22582708-22583756_esv2663069|chr14:22592792-22593350_dbVar|chr14:22621082-22623586_dbVar|chr14:22650745-22651552_dbVar|chr14:22690248-22693574_dbVar|14:22740309-22923239_esv3633740|chr14:22753195-22755692_dbVar|chr14:22763326-22765409_dbVar...;po_B_loss_someG_coord=14:22111110-23021097_HI40:ISCA-37476|chr14:22375089-22375885_dbVar|chr14:22381501-22381559_dbVar|chr14:22392130-22392542_dbVar|chr14:22414330-22458520_dbVar|chr14:22501037-22503623_dbVar|chr14:22520154-22520348_dbVar|14:22549070-22959340_DDD:42190|14:22558879-22995788_dgv599e212|chr14:22570896-22575554_dbVar|chr14:22582165-22583029_dbVar|14:22582707-22583756_gnomAD-SV_v2.1_DEL_14_140471|14:22582708-22583756_IMH|14:22582714-22583762_esv3633739|chr14:22602805-22607184_dbVar|chr14:22629626-22629708_dbVar|chr14:22667031-22667110_dbVar|chr14:22731881-22732433_dbVar|chr14:22740393-22749648_dbVar|chr14:22760947-22761344_dbVar...;GC_content_left=0.25;GC_content_right=0.39;NCBI_gene_ID=.,105370401;HGNC_gene_ID=.,HGNC:56197;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=22952279;SVLEN=-628400	GT	1/.
14	74001652	.	C	<DEL>	.	PASS	AnnotSV_ID=14_74001652_74022324_DEL_1;SV_start=74001652;Biologist_ranking=Benign;Annotation_mode=full,split,split;CytoBand=q24.3;Gene_name=HEATR4|ACOT1,HEATR4,ACOT1;Closest_left=RIOX1;Closest_right=ACOT2;Gene_count=2;Tx=.,NM_001220484,NM_001037161;Tx_version=.,1,2;Tx_start=.,73945188,74003846;Tx_end=.,74025651,74010500;Overlapped_tx_length=.,20673,6654;Overlapped_CDS_length=.,0,1266;Overlapped_CDS_percent=.,0,100;Frameshift=.,.,no;Exon_count=.,18,3;Location=.,intron1-intron1,txStart-txEnd;Location2=.,5'UTR,5'UTR-3'UTR;Dist_nearest_SS=.,3130,.;Nearest_SS_type=.,5',.;Intersect_start=.,74001651,74003846;Intersect_end=.,74022324,74010500;RE_gene=COQ6_(morbid/RE=EA_enhancer)|ISCA2_(morbid/RE=GH_enhancer)|PSEN1_(morbid/RE=EA_enhancer);po_P_gain_source=dbVar:nssv15162475|dbVar:nssv15161908|dbVar:nssv15162476|dbVar:nssv15161629|dbVar:nssv15161107|nssv15161424|dbVar:nssv15161067|dbVar:nssv17976728|dbVar:nssv17517489|dbVar:nssv15161689;po_P_gain_coord=14:19000423-107289053|14:19280734-107287663|14:19327824-107287663|14:19794562-107234280|14:20511674-107285437|14:20619309-107263478|14:37671059-106985955|14:54654002-75828024|14:73750742-107285437;po_P_gain_percent=0.02|0.02|0.02|0.02|0.02|0.02|0.03|0.10|0.06;po_P_loss_source=dbVar:nssv15161064|dbVar:nssv8639619|dbVar:nssv15161370;po_P_loss_coord=14:70028817-82441728|14:73152116-77698582|14:73809922-79301402;po_P_loss_percent=0.17|0.45|0.38;B_gain_source=DDD:43163|dgv655e212|dgv657e212;B_gain_coord=14:73995762-74031034|14:73998504-74050492|14:74001111-74024031;B_gain_AFmax=0.1799;B_loss_source=1000g|DDD:43161|DDD:43163|dbVar|dgv401e199|dgv654e212|esv2421969|esv3634909,1000g|DDD:43161|DDD:43163|dbVar|dgv401e199|dgv654e212|esv2421969|esv3634909,1000g|DDD:43161|DDD:43163|DDD:43165|dbVar|dgv401e199|dgv654e212|esv2421969|esv3634909;B_loss_coord=14:73995762-74031034|14:73996446-74025592|14:73997052-74024450|chr14:73997195-74024603|14:73997196-74024603|14:73997196-74024603|14:73998504-74050492|14:73998977-74028117,14:73995762-74031034|14:73996446-74025592|14:73997052-74024450|chr14:73997195-74024603|14:73997196-74024603|14:73997196-74024603|14:73998504-74050492|14:73998977-74028117,14:73995762-74031034|14:73996446-74025592|14:73997052-74024450|chr14:73997195-74024603|14:73997196-74024603|14:73997196-74024603|14:73998504-74050492|14:73998977-74028117|14:74001124-74020979;B_loss_AFmax=0.8135;B_inv_source=IMH;B_inv_coord=14:34547844-76392174;B_inv_AFmax=0.0264;po_B_gain_someG_source=14:73998504-74050492_DDD:43163|14:74001655-74002844_DDD:43168|14:74007603-74039880_IMH|14:74007864-74040335_IMH|14:74008288-74008463_nsv514748|14:74011084-74024007_1000g|14:74011084-74024007_dgv407e214|;po_B_gain_someG_coord=14:73995762-74031034_dgv655e212|14:74001111-74024031_dgv657e212|14:74001655-74004589_DDD:43169|14:74007816-74040003_IMH|14:74007919-74039902_gnomAD-SV_v2.1_DUP_14_38740|14:74010621-74023183_DDD:43174|14:74011084-74024007_1000g|14:74020544-74030798_DDD:43176;po_B_loss_someG_source=14:73996446-74025592_dgv401e199|chr14:73997195-74024603_dbVar|14:73997196-74024603_esv3634909|14:73998977-74028117_esv2421969|14:74002704-74003063_nsv514747|14:74006839-74031034_dgv661e212|14:74010064-74012567_nsv514749|14:74011084-74024007_1000g|chr14:74019700-74051250_dbVar|;po_B_loss_someG_coord=14:73995762-74031034_dgv654e212|14:73997052-74024450_DDD:43161|14:73997196-74024603_1000g|14:73998504-74050492_DDD:43163|14:74001124-74020979_DDD:43165|14:74006839-74024031_dgv660e212|14:74006971-74038879_esv2672436|chr14:74011083-74024007_dbVar|14:74011084-74024007_esv3634910|14:74022142-74045835_DDD:43178;GC_content_left=0.42;GC_content_right=0.38;Repeat_coord_left=14:74001513-74001649|14:74001714-74002042;Repeat_type_left=FLAM_A|L1ME4a;Repeat_coord_right=14:74021756-74022225;Repeat_type_right=L1M1;SegDup_left=14:74000099-74020296;DDD_HI_percent=85.75,85.75,79.11;ExAC_synZ=2.96959666946894,-0.328810289068687,2.96959666946894;ExAC_misZ=4.05533207481267,-0.503765753071617,4.05533207481267;NCBI_gene_ID=.,399671,641371;HGNC_gene_ID=.,HGNC:16761,HGNC:33128;LOEUF_bin=6,6,8;GnomAD_pLI=6.4141e-05,1.3711e-29,6.4141e-05;ExAC_pLI=0.035999,6.2323e-17,0.035999;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(2_genes,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1;END=74022324;SVLEN=-20673	GT	1/.
14	107152093	.	C	<DEL>	.	PASS	AnnotSV_ID=14_107152093_107180095_DEL_1;SV_start=107152093;Biologist_ranking=Benign;Annotation_mode=full;CytoBand=q32.33;Closest_left=LINC00221;Closest_right=MIR5195;Gene_count=0;po_P_gain_source=dbVar:nssv15162475|dbVar:nssv15161908|dbVar:nssv15162476|dbVar:nssv15161629|dbVar:nssv15161107|nssv15161424|dbVar:nssv15161067|dbVar:nssv15161689|dbVar:nssv15161760|dbVar:nssv15161081|dbVar:nssv18330720|dbVar:nssv15161039|dbVar:nssv15161040|dbVar:nssv15777241|dbVar:nssv15125898|dbVar:nssv15161535|dbVar:nssv15777234|dbVar:nssv15161537|dbVar:nssv15606082|dbVar:nssv15161360|dbVar:nssv15135151;po_P_gain_coord=14:19000423-107289053|14:19280734-107287663|14:19327824-107287663|14:19794562-107234280|14:20511674-107285437|14:20619309-107263478|14:73750742-107285437|14:74122476-107287505|14:77689139-107287505|14:84537503-107285437|14:86560375-107240869|14:91922206-107240869|14:91969029-107285437|14:93331785-107289540|14:98104858-107263478|14:99794231-107285437|14:99914350-107258824|14:100575918-107281934|14:103788752-107263478|14:106252706-107263478;po_P_gain_percent=0.03|0.03|0.03|0.03|0.03|0.03|0.08|0.08|0.09|0.12|0.14|0.18|0.18|0.20|0.31|0.37|0.38|0.42|0.81|2.77;po_P_loss_source=dbVar:nssv15161324|dbVar:nssv16215328|dbVar:nssv15161030|dbVar:nssv15161062|dbVar:nssv15142554|dbVar:nssv15161267|dbVar:nssv15161579|dbVar:nssv15161268|dbVar:nssv17968992|dbVar:nssv15161102|dbVar:nssv15161557|dbVar:nssv16255573|dbVar:nssv15142555|dbVar:nssv15161354|dbVar:nssv18841864|dbVar:nssv15777252|dbVar:nssv15161369|dbVar:nssv15141232|nssv16208943|dbVar:nssv18830964|dbVar:nssv15150359|dbVar:nssv15161271|dbVar:nssv15161574|dbVar:nssv15161803|dbVar:nssv16208399|dbVar:nssv15142293|dbVar:nssv16208400|dbVar:nssv15120383|dbVar:nssv15137946;po_P_loss_coord=14:95990745-107287708|14:96829291-107287663|14:98404975-107263478|14:100297993-107263478|14:100661320-107285437|14:100775720-107263478|14:101048397-107285437|14:101274638-107263478|14:101732159-107285437|14:102131940-107263478|14:102392008-107284531|14:102615954-107285437|14:102670707-107285437|14:102705760-107285437|14:102729778-107283138|14:102931120-107285437|14:103071434-107287505|14:103153638-107285437|14:103636648-107285437|14:103965060-107285437|14:104251096-107278770|14:104289938-107287505|14:104517596-107285437|14:104764079-107285437|14:104915609-107285437|14:105303585-107285437|14:105489734-107258965|14:106252706-107287505;po_P_loss_percent=0.25|0.27|0.32|0.40|0.42|0.43|0.45|0.47|0.50|0.55|0.57|0.60|0.61|0.61|0.61|0.64|0.66|0.68|0.77|0.84|0.92|0.93|1.01|1.11|1.18|1.41|1.58|2.71;B_gain_source=DDD:43963|TS40:ISCA-37477|esv2760346;B_gain_coord=14:106050001-107289540|14:106437088-107285437|14:107136632-107191499;B_gain_AFmax=0.0828;B_loss_source=DDD:43904|DDD:43963|HI40:ISCA-37477|esv2760346;B_loss_coord=14:106050001-107289540|14:106437088-107285437|14:106700994-107266403|14:107136632-107191499;B_loss_AFmax=0.2438;po_B_gain_someG_source=14:106437088-107285437_esv2760346|14:107136632-107191499_DDD:43963|14:107147167-107164532_TS40:ISCA-46684|;po_B_gain_someG_coord=14:106050001-107289540_TS40:ISCA-37477|14:106874357-107164992_IMH|14:107145552-107179808_dgv699e212|14:107147167-107164532_dgv428e214;po_B_loss_someG_source=14:106437088-107285437_esv2760346|14:107054315-107166266_DDD:43951|chr14:107138985-107155491_dbVar|14:107172849-107183396_HI40:ISCA-46673|14:107174372-107174933_IMH|14:107174399-107174927_DDD:43974|;po_B_loss_someG_coord=14:106050001-107289540_HI40:ISCA-37477|14:106700994-107266403_DDD:43904|14:107136632-107191499_DDD:43963|chr14:107171543-107171645_dbVar|14:107172849-107183396_esv3635707|14:107174391-107174931_esv3635708|14:107174399-107174927_esv2665347;GC_content_left=0.355;GC_content_right=0.425;ENCODE_blacklist_left=14:107151001-107176900;ENCODE_blacklist_characteristics_left=High_Signal_Region;AnnotSV_ranking_score=-1.6;AnnotSV_ranking_criteria=1B_(cf_Gene_count,_RE_gene,_-0.60)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(0_gene,_+0.00)|5F_(+0.00);ACMG_class=1;END=107180095;SVLEN=-28003	GT	1/.
15	20432852	.	G	<DUP>	.	PASS	AnnotSV_ID=15_20432852_22765687_DUP_1;SV_start=20432852;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=q11.1-q11.2,q11.1,q11.1-q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2;Gene_name=CHEK2P2|HERC2P3|GOLGA6L6|GOLGA8CP|NBEAP1|MIR3118-2|POTEB2|MIR5701-1|LINC01193|FAM30C|LOC646214|CXADRP2|POTEB|NF1P2|LINC02203|OR4M2-OT1|OR4M2|OR4N4|OR4N3P|IGHV1OR15-1|IGHV1OR15-3|MIR1268A|REREP3|MIR4509-1|GOLGA8DP|GOLGA6L1,CHEK2P2,HERC2P3,GOLGA6L6,GOLGA8CP,NBEAP1,MIR3118-2,POTEB2,MIR5701-1,LINC01193,FAM30C,LOC646214,CXADRP2,POTEB,NF1P2,LINC02203,OR4M2-OT1,OR4M2,OR4N4,OR4N3P,IGHV1OR15-1,IGHV1OR15-3,MIR1268A,REREP3,MIR4509-1,GOLGA8DP,GOLGA6L1;Closest_right=TUBGCP5;Gene_count=26;Tx=.,NR_038836,NR_036432,NM_001145004,NR_027411,NR_027992,NR_036062,NM_001277303,NR_049886,NR_040094,NR_145444,NR_027053,NR_024387,NM_001277304,NR_028506,NR_152818,NR_110480,NM_001004719,NM_001005241,NR_028067,NR_135694,NR_135666,NR_031672,NR_033735,NR_039732,NR_027407,NM_001001413;Tx_version=.,1,1,2,2,1,2,1,1,1,1,2,1,2,2,1,1,2,4,1,1,1,1,1,1,1,3;Tx_start=.,20487996,20613648,20737093,20767673,20874796,21038123,21040700,21145580,21145766,21208605,21932513,22014402,22051852,22133180,22195582,22278030,22368477,22382472,22413461,22448239,22465805,22513228,22546564,22675147,22702284,22736245;Tx_end=.,20496811,20711433,20747114,20781026,20961480,21038198,21071643,21145662,21198633,21255165,21940739,22016878,22083259,22145802,22199978,22383564,22369561,22383813,22414398,22448881,22466547,22513280,22570831,22675241,22715728,22746002;Overlapped_tx_length=.,8815,97785,10021,13353,86684,75,30943,82,52867,46560,8226,2476,31407,12622,4396,105534,1084,1341,937,642,742,52,24267,94,13444,9757;Overlapped_CDS_length=.,0,0,2175,0,0,0,1635,0,0,0,0,0,1635,0,0,0,942,951,0,0,0,0,0,0,0,2007;Overlapped_CDS_percent=.,0,0,100,0,0,0,100,0,0,0,0,0,100,0,0,0,95,100,0,0,0,0,0,0,0,100;Frameshift=.,.,.,no,.,.,.,no,.,.,.,.,.,no,.,.,.,no,no,.,.,.,.,.,.,.,no;Exon_count=.,6,26,11,18,3,1,11,1,5,4,1,1,11,8,3,9,1,1,1,2,2,1,3,1,18,9;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,UTR,UTR,UTR,5'UTR-3'UTR;Intersect_start=.,20487996,20613648,20737093,20767673,20874796,21038123,21040700,21145580,21145766,21208605,21932513,22014402,22051852,22133180,22195582,22278030,22368477,22382472,22413461,22448239,22465805,22513228,22546564,22675147,22702284,22736245;Intersect_end=.,20496811,20711433,20747114,20781026,20961480,21038198,21071643,21145662,21198633,21255165,21940739,22016878,22083259,22145802,22199978,22383564,22369561,22383813,22414398,22448881,22466547,22513280,22570831,22675241,22715728,22746002;RE_gene=ADAM22_(morbid/RE=mTL_miRNA)|AGO2_(morbid/RE=mTL_miRNA)|AIP_(morbid/RE=mTL_miRNA)|BLOC1S3_(morbid/RE=mTL_miRNA)|CA12_(morbid/RE=mTL_miRNA)|CACNA1H_(morbid/RE=mTL_miRNA)|CAMK2G_(morbid/RE=mTL_miRNA)|CDKN1B_(HI=3/morbid/RE=mTL_miRNA)|CERS1_(morbid/RE=mTL_miRNA)|DHCR7_(morbid/RE=mTL_miRNA)|DICER1_(HI=3/morbid/RE=mTL_miRNA)|EDAR_(morbid/RE=mTL_miRNA)|EGLN1_(morbid/RE=mTL_miRNA)|EPB41_(morbid/RE=mTL_miRNA)|EPHA2_(morbid/RE=mTL_miRNA)|ERBB3_(morbid/RE=mTL_miRNA)|FRMPD4_(morbid/RE=mTL_miRNA)|GABRB2_(morbid/RE=mTL_miRNA)|GATA6_(HI=3/morbid/RE=mTL_miRNA)|GCK_(morbid/RE=mTL_miRNA)|HPRT1_(HI=3/morbid/RE=mTL_miRNA)|HRAS_(morbid/RE=mTL_miRNA)|HSPD1_(morbid/RE=mTL_miRNA)|IL6ST_(morbid/RE=mTL_miRNA)|INF2_(morbid/RE=mTL_miRNA)|ISCU_(morbid/RE=mTL_miRNA)|KAT6B_(HI=3/morbid/RE=mTL_miRNA)|KCNJ10_(morbid/RE=mTL_miRNA)|KIF23_(morbid/RE=mTL_miRNA)|KLHL3_(morbid/RE=mTL_miRNA)|KMT2D_(HI=3/morbid/RE=mTL_miRNA)|LRIG2_(morbid/RE=mTL_miRNA)|MAGEL2_(morbid/RE=ABC_enhancer)|MAPK1_(morbid/RE=mTL_miRNA)|MAPKAPK5_(morbid/RE=mTL_miRNA)|MKRN3_(morbid/RE=ABC_enhancer)|NDUFS1_(morbid/RE=mTL_miRNA)|NEK9_(morbid/RE=mTL_miRNA)|NIPA1_(morbid/RE=ABC_enhancer)|NPM1_(morbid/RE=mTL_miRNA)|ORAI1_(morbid/RE=mTL_miRNA)|PEX26_(morbid/RE=mTL_miRNA)|PHF12_(HI=3/RE=mTL_miRNA)|PIGP_(morbid/RE=mTL_miRNA)|POT1_(morbid/RE=mTL_miRNA)|PRKCA_(morbid/RE=mTL_miRNA)|PRLR_(morbid/RE=mTL_miRNA)|PURA_(HI=3/morbid/RE=mTL_miRNA)|RAC3_(morbid/RE=mTL_miRNA)|SCN1A_(HI=3/morbid/RE=mTL_miRNA)...;po_P_gain_source=dbVar:nssv15172447|dbVar:nssv15149081|dbVar:nssv15148902|dbVar:nssv15125410|dbVar:nssv15127689|dbVar:nssv15127462|dbVar:nssv15126524|dbVar:nssv15124656|dbVar:nssv15127659|dbVar:nssv15126021|dbVar:nssv15172190|dbVar:nssv15150569|dbVar:nssv15147052|dbVar:nssv15145742|dbVar:nssv15147053|dbVar:nssv15175556|dbVar:nssv15145744|dbVar:nssv15774514|dbVar:nssv15148785|dbVar:nssv15605894|dbVar:nssv15149135|dbVar:nssv15148575|dbVar:nssv15147687|dbVar:nssv15605895|dbVar:nssv15147058|dbVar:nssv15145747|dbVar:nssv15146452|dbVar:nssv15149084|dbVar:nssv15147355|dbVar:nssv15149616|dbVar:nssv15147801|dbVar:nssv15146958|dbVar:nssv15149124|dbVar:nssv15123304|dbVar:nssv15147513|dbVar:nssv15127079|dbVar:nssv15605897|dbVar:nssv15605899|dbVar:nssv15125414|dbVar:nssv15148135|dbVar:nssv15146406|dbVar:nssv15148053|dbVar:nssv15145661|nssv15146195|dbVar:nssv15145807|dbVar:nssv15147309|dbVar:nssv15145805|nssv15146672|dbVar:nssv15145677|dbVar:nssv18841879|dbVar:nssv16207640|dbVar:nssv16215281|dbVar:nssv15755702|dbVar:nssv15145809|nssv15150756|dbVar:nssv15145849|dbVar:nssv15146718|dbVar:nssv15148834|dbVar:nssv15147450|nssv15148847|dbVar:nssv15146035|dbVar:nssv15148907|dbVar:nssv15146735|dbVar:nssv15148824|dbVar:nssv15146042|dbVar:nssv15147411|dbVar:nssv15147985|dbVar:nssv15148007|dbVar:nssv15146680|dbVar:nssv15147424|dbVar:nssv15148131|dbVar:nssv15145909;po_P_gain_coord=15:20016812-102493540|15:20044343-28924405|15:20045835-32914140|15:20063341-102521392|15:20063341-29093456|15:20063341-29209620|15:20063341-30448351|15:20063341-32439302|15:20063341-32942613|15:20063341-32986584|15:20071674-102461162|15:20071674-30737344|15:20085003-28947309|15:20085003-29210720|15:20085004-28178425|15:20102541-29031690|15:20110723-28408897|15:20179528-32998070|15:20190549-28406650|15:20190549-30300265|15:20190549-32386089|15:20190549-32917801|15:20190549-32917857|15:20191653-28525310|15:20207714-30641396|15:20207714-32413623|15:20251769-28631040|15:20306550-26208861|15:20686197-30509384|15:20733396-102511616|15:20733396-28406650|15:20733396-28406709|15:20848461-27662530|15:21129985-28535266|15:22304597-28577787|15:22318645-29209620|15:22382861-32396457|15:22383300-32917689|15:22409402-28952953|15:22652061-28883749|15:22669053-28435888|15:22698523-28940098|15:22698523-29030517|15:22698523-29085896|15:22698523-30366124|15:22698523-30653936|15:22698523-32899558|15:22742397-28567325|15:22750306-23114374|15:22750306-23164315|15:22750306-23226254|15:22765629-28520313|15:22765629-28557186|15:22765629-28559402|15:22765629-28912057|15:22765629-29006852|15:22765629-29085896|15:22765629-29096442|15:22765629-30366124|15:22765629-30653936|15:22765629-30819509|15:22765629-38837526|15:22765638-28520316|15:22765638-29085888|15:22765638-30366079|15:22765638-31467435|15:22765638-32509932|15:22765638-32899558;po_P_gain_percent=2.83|26.27|18.13|2.83|25.83|25.51|22.46|18.85|18.11|18.05|2.83|21.87|26.32|25.56|28.82|26.13|28.11|18.20|28.39|23.08|19.13|18.33|18.33|27.99|22.36|19.11|27.84|39.52|21.17|2.49|26.49|26.49|28.14|22.09|7.35|6.49|3.82|3.63|5.44|1.82|1.68|1.08|1.06|1.05|0.88|0.84|0.66|0.40|4.23|3.72|3.23|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00;po_P_loss_source=dbVar:nssv16865885|dbVar:nssv18326337|dbVar:nssv15605896|dbVar:nssv15123310|dbVar:nssv18841918|dbVar:nssv16208656|dbVar:nssv18792791|dbVar:nssv16215320|dbVar:nssv15147060|dbVar:nssv15146946|dbVar:nssv15147062|dbVar:nssv15153078|dbVar:nssv18792767|dbVar:nssv15160814|dbVar:nssv15160813|dbVar:nssv15159751|dbVar:nssv15160812|dbVar:nssv16216734|dbVar:nssv16297059|dbVar:nssv15147987|dbVar:nssv16215225|dbVar:nssv16208660|dbVar:nssv15160288|dbVar:nssv15146407|dbVar:nssv15145750|dbVar:nssv16297060|dbVar:nssv15149692|dbVar:nssv15147712|dbVar:nssv15145753|dbVar:nssv15147316|dbVar:nssv15145752|nssv15148282|dbVar:nssv15146196|nssv15146797|dbVar:nssv15146673|dbVar:nssv15147319|dbVar:nssv18326338|dbVar:nssv17955873|dbVar:nssv18842037|dbVar:nssv15145025|dbVar:nssv15145441|dbVar:nssv15145201|dbVar:nssv17517455|dbVar:nssv16297061|dbVar:nssv16208668|dbVar:nssv15129123|dbVar:nssv16215325|dbVar:nssv15130100|dbVar:nssv16209033|dbVar:nssv15172201|dbVar:nssv15606130|dbVar:nssv15132915|nssv16736610|dbVar:nssv16736624|nssv16736646|dbVar:nssv16091751|dbVar:nssv15130140|dbVar:nssv15146040|dbVar:nssv15148147|dbVar:nssv15146043|dbVar:nssv15145953|dbVar:nssv15148915|dbVar:nssv15148857|dbVar:nssv15146645;po_P_loss_coord=15:20612841-23272733|15:20739498-28566579|15:20848751-32925141|15:21129985-32514926|15:21172301-26208861|15:21903816-23272733|15:22070541-23262343|15:22299435-23226254|15:22318598-28940098|15:22427967-23226254|15:22432629-30641396|15:22503622-23091180|15:22646195-23174919|15:22646195-23191269|15:22646195-23199953|15:22646195-23302626|15:22646195-23428906|15:22646693-28964445|15:22646800-23301267|15:22652048-28705151|15:22652331-23226254|15:22652331-23272733|15:22652331-29050198|15:22669053-28435888|15:22669053-30401486|15:22695843-23300942|15:22698523-28406650|15:22698523-28406709|15:22698523-28520313|15:22698523-28557186|15:22698523-28691460|15:22698523-29030517|15:22698523-29085896|15:22698523-38381783|15:22736247-23265381|15:22743128-23246000|15:22744150-23246340|15:22746945-23102836|15:22746945-23121448|15:22746945-23199421|15:22746949-23323445|15:22749636-23301317|15:22750306-23109890|15:22750306-23164315|15:22750306-23222284|15:22750306-23226254|15:22750306-23272733|15:22750306-28535266|15:22751195-23251194|15:22765629-23085096|15:22765629-23191062|15:22765629-23217514|15:22765629-23300287|15:22765629-28559402|15:22765629-28691460|15:22765629-28912057|15:22765629-28940098|15:22765629-28976193|15:22765629-32676855|15:22765638-29085888;po_P_loss_percent=80.94|25.89|15.87|14.37|31.64|62.96|58.33|50.31|6.75|42.31|4.06|44.60|22.60|21.92|21.58|18.20|15.27|1.88|18.17|1.88|19.75|18.27|1.77|1.68|1.25|11.54|1.18|1.18|1.15|1.15|1.12|1.06|1.05|0.43|5.56|4.49|4.29|5.27|5.00|4.14|3.25|2.91|4.28|3.72|3.26|3.23|2.94|0.27|2.90|0.02|0.01|0.01|0.01|0.00|0.00|0.00|0.00|0.00|0.00|0.00;B_gain_source=dgv40e203|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595|nsv514765,DDD:43986|DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|TS40:ISCA-46688|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55|esv3892595,DDD:44001|DDD:44096|DDD:44097|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55,1000g|DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44119|dgv2191n100|dgv3e224|dgv40e203|dgv435e214|dgv92e55|dgv93e55|nsv514767,DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44119|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55|nsv514767,1000g|DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44129|dgv2191n100|dgv3e224|dgv40e203|dgv437e214|dgv92e55|dgv93e55|nsv514767,1000g|DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44129|dgv2191n100|dgv3e224|dgv40e203|dgv438e214|dgv92e55|dgv93e55|nsv514767,1000g|DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44129|dgv2191n100|dgv3e224|dgv40e203|dgv438e214|dgv92e55|dgv93e55|nsv514767,DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44129|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55|nsv514767,DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44129|DDD:44147|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55|nsv514767,DDD:44147|DDD:44168|dgv40e203|dgv93e55,DDD:44147|DDD:44168|dgv40e203|dgv93e55,dgv40e203|dgv93e55;B_gain_coord=15:20016329-23487546|15:20167087-22869764,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21040437-21077011,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-2220763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13|DDD:44114|DDD:44119|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44114|DDD:44129|dbVar|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44114|DDD:44129|dbVar|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44129|dbVar|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44129|DDD:44139|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44129|DDD:44147|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44147|DDD:44168|dgv40e203|dgv94e55,DDD:44147|DDD:44168|dgv40e203|dgv94e55,dgv40e203|dgv94e55;B_loss_coord=15:20016329-23487546|15:20167087-23222284,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21069662-21311925,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21069662-21311925,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21069662-21311925,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:21904679-21949433|15:21906623-22142846,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:21906623-22142846,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:21906623-22142846,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22320058-22588019|chr15:22343965-22372302|15:22360686-22387071,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22320058-22588019|15:22360686-22387071,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22320058-22588019|chr15:22383477-22434169|15:22411349-22577661,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22320058-22588019|15:22411349-22577661|chr15:22446739-22506103,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22320058-22588019|15:22411349-22577661|chr15:22446739-22506103,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22320058-22588019|15:22411349-22577661|15:22475646-22537915,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22320058-22588019|15:22411349-22577661|15:22519942-22726364,15:20016329-23487546|15:20167087-23222284|15:22519942-22726364|15:22650162-22738662,15:20016329-23487546|15:20167087-23222284|15:22519942-22726364|15:22650162-22738662,15:20016329-23487546|15:20167087-23222284;B_loss_AFmax=0.1,0.271,0.271,0.271,0.271,0.271,0.271,0.271,0.271,0.271,0.271,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.1,0.1,0.1;B_inv_source=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,IMH,IMH,IMH;B_inv_coord=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,15:22658037-28688749,15:22658037-28688749,15:22658037-28688749;B_inv_AFmax=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.157,0.157,0.157;po_B_gain_someG_source=15:20037886-21236662_DDD:43986|15:20167087-21200251_dgv91e55|15:20167087-22869764_dgv93e55|15:20203950-22588019_dgv2191n100|15:20550641-20637800_nsv514762|15:20575412-20599635_DDD:44041|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20650251-20710056_nsv514763|15:20717000-20724000_gnomAD-SV_v2.1_DUP_15_39413|15:20749534-20773538_DDD:44053|15:20779661-20885221_DDD:44055|15:20786000-20827000_gnomAD-SV_v2.1_DUP_15_39420|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20935077-20960284_nsv514764|15:21069662-21311925_DDD:44068|15:21153622-21170901_nsv514766...;po_B_gain_someG_coord=15:20016329-23487546_dgv40e203|15:20144627-21266621_DDD:43992|15:20167087-22588036_dgv92e55|15:20182203-22608281_DDD:44001|15:20388742-22207639_TS40:ISCA-46686|15:20556528-20624827_DDD:44039|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_dgv430e214|15:20686000-20711550_gnomAD-SV_v2.1_DUP_15_39411|15:20746872-20747023_DDD:44052|15:20751226-21293606_esv3892595|15:20783000-20799000_gnomAD-SV_v2.1_DUP_15_39419|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20846722-20867075_dgv431e214|15:21040437-21077011_nsv514765|15:21145102-21164300_TS40:ISCA-46688...;po_B_loss_someG_source=15:20144627-21266621_DDD:43992|15:20167090-22588036_dgv96e55|15:20396654-20496584_DDD:44013|15:20468142-20468256_DDD:44028|15:20547692-20548186_IMH|15:20575412-20599635_DDD:44041|15:20581464-20589613_esv2674516|15:20587419-20587601_gnomAD-SV_v2.1_DEL_15_145824|15:20698000-20706500_gnomAD-SV_v2.1_DEL_15_145825|chr15:20729175-20745525_dbVar|15:20749534-20773538_DDD:44053|chr15:20781000-20811000_dbVar|chr15:20820627-20821162_dbVar|chr15:20820696-20820748_dbVar|chr15:20891428-20891785_dbVar|chr15:20976350-20994050_dbVar|15:21042050-21056300_HI40:ISCA-46469|15:21042050-21056300_gnomAD-SV_v2.1_DEL_15_145837|chr15:21200932-21201488_dbVar|15:21321039-21325126_DDD:44088...;po_B_loss_someG_coord=15:20016329-23487546_dgv40e203|15:20167087-23222284_dgv94e55|15:20182203-22608281_DDD:44001|chr15:20436850-20437443_dbVar|chr15:20511834-20511893_dbVar|15:20556528-20624827_DDD:44039|15:20581414-20589751_IMH|chr15:20587419-20587601_dbVar|chr15:20698000-20706500_dbVar|15:20729175-20745525_HI40:ISCA-46468|chr15:20732300-20738500_dbVar|15:20779661-20885221_DDD:44055|chr15:20806100-20823500_dbVar|15:20820627-20821162_gnomAD-SV_v2.1_DEL_15_145830|chr15:20881220-20881325_dbVar|15:20945597-20946011_esv2664547|chr15:21017763-21017994_dbVar|chr15:21042050-21056300_dbVar|15:21069662-21311925_DDD:44068|chr15:21282800-21314300_dbVar...;GC_content_left=0.38;GC_content_right=0.455;Repeat_coord_right=15:22765220-22765620|15:22765771-22766019;Repeat_type_right=L1MC4|L2;SegDup_left=15:20345908-20498625|15:20390971-20432871;SegDup_right=15:22754054-22770109;ENCODE_blacklist_left=15:20200401-22365100;ENCODE_blacklist_characteristics_left=High_Signal_Region;DDD_HI_percent=93.81,.,.,93.81,.,.,.,92.58,.,.,.,.,.,91.86,.,.,.,76.23,75.33,.,.,.,.,.,.,.,93.48;ExAC_synZ=2.22375841006203,.,.,0.630577750419089,.,.,.,2.22375841006203,.,.,.,.,.,.,.,.,.,.,-0.271906921498889,.,.,.,.,.,.,.,.;ExAC_misZ=2.58284576037233,.,.,0.0606178603183018,.,.,.,2.58284576037233,.,.,.,.,.,.,.,.,.,.,-0.565772314050669,.,.,.,.,.,.,.,.;NCBI_gene_ID=.,646096,283755,727832,729786,606,100422949,100287399,100847060,348120,654499,.,646243,100996331,440225,727924,101927079,390538,283694,390539,388077,646370,100302233,646396,100616223,100132979,283767;HGNC_gene_ID=.,HGNC:43578,HGNC:4871,HGNC:37225,HGNC:32375,HGNC:1007,HGNC:38324,HGNC:48327,HGNC:43522,HGNC:28003,HGNC:31024,.,HGNC:33973,HGNC:33734,HGNC:38664,HGNC:53069,HGNC:56199,HGNC:15373,HGNC:15375,HGNC:15374,HGNC:5563,HGNC:5565,HGNC:35336,HGNC:38797,HGNC:41860,HGNC:32376,HGNC:37444;LOEUF_bin=8,.,.,8,.,.,.,8,.,.,.,.,.,9,.,.,.,9,9,.,.,.,.,.,.,.,8;GnomAD_pLI=0.35277,.,.,2.2875000000000003e-19,.,.,.,0.042457,.,.,.,.,.,0.35277,.,.,.,3.9447e-08,5.1332e-05,.,.,.,.,.,.,.,2.3586e-12;ExAC_pLI=0.57189,.,.,0.086864,.,.,.,0.57189,.,.,.,.,.,.,.,.,.,.,0.018051,.,.,.,.,.,.,.,.;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|3A_(26_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1;END=22765687;SVLEN=2332836	GT	1/.
15	20564609	.	C	<DEL>	.	PASS	AnnotSV_ID=15_20564609_22409391_DEL_1;SV_start=20564609;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=q11.1-q11.2,q11.1-q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2;Gene_name=HERC2P3|GOLGA6L6|GOLGA8CP|NBEAP1|MIR3118-2|POTEB2|MIR5701-1|LINC01193|FAM30C|LOC646214|CXADRP2|POTEB|NF1P2|LINC02203|OR4M2-OT1|OR4M2|OR4N4,HERC2P3,GOLGA6L6,GOLGA8CP,NBEAP1,MIR3118-2,POTEB2,MIR5701-1,LINC01193,FAM30C,LOC646214,CXADRP2,POTEB,NF1P2,LINC02203,OR4M2-OT1,OR4M2,OR4N4;Closest_left=CHEK2P2;Closest_right=OR4N3P;Gene_count=17;Tx=.,NR_036432,NM_001145004,NR_027411,NR_027992,NR_036062,NM_001277303,NR_049886,NR_040094,NR_145444,NR_027053,NR_024387,NM_001277304,NR_028506,NR_152818,NR_110480,NM_001004719,NM_001005241;Tx_version=.,1,2,2,1,2,1,1,1,1,2,1,2,2,1,1,2,4;Tx_start=.,20613648,20737093,20767673,20874796,21038123,21040700,21145580,21145766,21208605,21932513,22014402,22051852,22133180,22195582,22278030,22368477,22382472;Tx_end=.,20711433,20747114,20781026,20961480,21038198,21071643,21145662,21198633,21255165,21940739,22016878,22083259,22145802,22199978,22383564,22369561,22383813;Overlapped_tx_length=.,97785,10021,13353,86684,75,30943,82,52867,46560,8226,2476,31407,12622,4396,105534,1084,1341;Overlapped_CDS_length=.,0,2175,0,0,0,1635,0,0,0,0,0,1635,0,0,0,942,951;Overlapped_CDS_percent=.,0,100,0,0,0,100,0,0,0,0,0,100,0,0,0,95,100;Frameshift=.,.,no,.,.,.,no,.,.,.,.,.,no,.,.,.,no,no;Exon_count=.,26,11,18,3,1,11,1,5,4,1,1,11,8,3,9,1,1;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR;Intersect_start=.,20613648,20737093,20767673,20874796,21038123,21040700,21145580,21145766,21208605,21932513,22014402,22051852,22133180,22195582,22278030,22368477,22382472;Intersect_end=.,20711433,20747114,20781026,20961480,21038198,21071643,21145662,21198633,21255165,21940739,22016878,22083259,22145802,22199978,22383564,22369561,22383813;RE_gene=ADAM22_(morbid/RE=mTL_miRNA)|CA12_(morbid/RE=mTL_miRNA)|CDKN1B_(HI=3/morbid/RE=mTL_miRNA)|DICER1_(HI=3/morbid/RE=mTL_miRNA)|EDAR_(morbid/RE=mTL_miRNA)|EGLN1_(morbid/RE=mTL_miRNA)|ERBB3_(morbid/RE=mTL_miRNA)|GABRB2_(morbid/RE=mTL_miRNA)|GATA6_(HI=3/morbid/RE=mTL_miRNA)|HSPD1_(morbid/RE=mTL_miRNA)|IL6ST_(morbid/RE=mTL_miRNA)|INF2_(morbid/RE=mTL_miRNA)|ISCU_(morbid/RE=mTL_miRNA)|KAT6B_(HI=3/morbid/RE=mTL_miRNA)|KCNJ10_(morbid/RE=mTL_miRNA)|KLHL3_(morbid/RE=mTL_miRNA)|KMT2D_(HI=3/morbid/RE=mTL_miRNA)|LRIG2_(morbid/RE=mTL_miRNA)|MAGEL2_(morbid/RE=ABC_enhancer)|MAPKAPK5_(morbid/RE=mTL_miRNA)|MKRN3_(morbid/RE=ABC_enhancer)|NDUFS1_(morbid/RE=mTL_miRNA)|NIPA1_(morbid/RE=ABC_enhancer)|NPM1_(morbid/RE=mTL_miRNA)|PEX26_(morbid/RE=mTL_miRNA)|PHF12_(HI=3/RE=mTL_miRNA)|PIGP_(morbid/RE=mTL_miRNA)|POT1_(morbid/RE=mTL_miRNA)|PRLR_(morbid/RE=mTL_miRNA)|PURA_(HI=3/morbid/RE=mTL_miRNA)|RAC3_(morbid/RE=mTL_miRNA)|SH2D1A_(HI=3/morbid/RE=mTL_miRNA)|SKI_(morbid/RE=mTL_miRNA)|SLC6A6_(morbid/RE=mTL_miRNA)|SLC7A14_(morbid/RE=mTL_miRNA)|SLC7A7_(morbid/RE=mTL_miRNA)|SMAD4_(HI=3/morbid/RE=mTL_miRNA)|SMAD6_(morbid/RE=mTL_miRNA)|SMOC1_(morbid/RE=mTL_miRNA)|SMOC2_(morbid/RE=mTL_miRNA)|SOX17_(morbid/RE=mTL_miRNA)|TULP1_(morbid/RE=mTL_miRNA)|USP48_(morbid/RE=mTL_miRNA)|ZBTB18_(HI=3/morbid/RE=mTL_miRNA)|ZNF711_(morbid/RE=mTL_miRNA);po_P_gain_source=dbVar:nssv15172447|dbVar:nssv15149081|dbVar:nssv15148902|dbVar:nssv15125410|dbVar:nssv15127689|dbVar:nssv15127462|dbVar:nssv15126524|dbVar:nssv15124656|dbVar:nssv15127659|dbVar:nssv15126021|dbVar:nssv15172190|dbVar:nssv15150569|dbVar:nssv15147052|dbVar:nssv15145742|dbVar:nssv15147053|dbVar:nssv15175556|dbVar:nssv15145744|dbVar:nssv15774514|dbVar:nssv15148785|dbVar:nssv15605894|dbVar:nssv15149135|dbVar:nssv15148575|dbVar:nssv15147687|dbVar:nssv15605895|dbVar:nssv15147058|dbVar:nssv15145747|dbVar:nssv15146452|dbVar:nssv15149084|dbVar:nssv15147355|dbVar:nssv15149616|dbVar:nssv15147801|dbVar:nssv15146958|dbVar:nssv15149124|dbVar:nssv15123304|dbVar:nssv15147513|dbVar:nssv15127079|dbVar:nssv15605897|dbVar:nssv15605899;po_P_gain_coord=15:20016812-102493540|15:20044343-28924405|15:20045835-32914140|15:20063341-102521392|15:20063341-29093456|15:20063341-29209620|15:20063341-30448351|15:20063341-32439302|15:20063341-32942613|15:20063341-32986584|15:20071674-102461162|15:20071674-30737344|15:20085003-28947309|15:20085003-29210720|15:20085004-28178425|15:20102541-29031690|15:20110723-28408897|15:20179528-32998070|15:20190549-28406650|15:20190549-30300265|15:20190549-32386089|15:20190549-32917801|15:20190549-32917857|15:20191653-28525310|15:20207714-30641396|15:20207714-32413623|15:20251769-28631040|15:20306550-26208861|15:20686197-30509384|15:20733396-102511616|15:20733396-28406650|15:20733396-28406709|15:20848461-27662530|15:21129985-28535266|15:22304597-28577787|15:22318645-29209620|15:22382861-32396457|15:22383300-32917689;po_P_gain_percent=2.24|20.77|14.34|2.24|20.43|20.17|17.76|14.91|14.32|14.27|2.24|17.30|20.82|20.22|22.79|20.66|22.23|14.39|22.45|18.25|15.13|14.49|14.49|22.14|17.68|15.11|22.02|31.26|17.54|2.05|21.84|21.84|22.91|17.28|1.67|1.32|0.26|0.25;po_P_loss_source=dbVar:nssv16865885|dbVar:nssv18326337|dbVar:nssv15605896|dbVar:nssv15123310|dbVar:nssv18841918|dbVar:nssv16208656|dbVar:nssv18792791|dbVar:nssv16215320|dbVar:nssv15147060;po_P_loss_coord=15:20612841-23272733|15:20739498-28566579|15:20848751-32925141|15:21129985-32514926|15:21172301-26208861|15:21903816-23272733|15:22070541-23262343|15:22299435-23226254|15:22318598-28940098;po_P_loss_percent=67.54|21.33|12.92|11.24|24.56|36.93|28.43|11.86|1.37;B_gain_source=DDD:44001|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595|nsv514765,DDD:43986|DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|TS40:ISCA-46688|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55|esv3892595,DDD:44001|DDD:44096|DDD:44097|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55,1000g|DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44119|dgv2191n100|dgv3e224|dgv40e203|dgv435e214|dgv92e55|dgv93e55|nsv514767,DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44119|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55|nsv514767;B_gain_coord=15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21040437-21077011,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21069662-21311925|15:21145102-21164300,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21069662-21311925,15:20016329-23487546|15:20144627-21266621|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21069662-21311925,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:21399090-22661412|15:21904679-21949433|15:21906623-22142846,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:2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e55|15:20203950-22588019_dgv2191n100|15:20550641-20637800_nsv514762|15:20575412-20599635_DDD:44041|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20650251-20710056_nsv514763|15:20717000-20724000_gnomAD-SV_v2.1_DUP_15_39413|15:20749534-20773538_DDD:44053|15:20779661-20885221_DDD:44055|15:20786000-20827000_gnomAD-SV_v2.1_DUP_15_39420|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20935077-20960284_nsv514764|15:21069662-21311925_DDD:44068|15:21153622-21170901_nsv514766...;po_B_gain_someG_coord=15:20016329-23487546_dgv40e203|15:20144627-21266621_DDD:43992|15:20167087-22588036_dgv92e55|15:20182203-22608281_DDD:44001|15:20388742-22207639_TS40:ISCA-46686|15:20556528-20624827_DDD:44039|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_dgv430e214|15:20686000-20711550_gnomAD-SV_v2.1_DUP_15_39411|15:20746872-20747023_DDD:44052|15:20751226-21293606_esv3892595|15:20783000-20799000_gnomAD-SV_v2.1_DUP_15_39419|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20846722-20867075_dgv431e214|15:21040437-21077011_nsv514765|15:21145102-21164300_TS40:ISCA-46688...;po_B_loss_someG_source=15:20144627-21266621_DDD:43992|15:20167090-22588036_dgv96e55|15:20556528-20624827_DDD:44039|15:20581414-20589751_IMH|chr15:20587419-20587601_dbVar|chr15:20698000-20706500_dbVar|15:20729175-20745525_HI40:ISCA-46468|chr15:20732300-20738500_dbVar|15:20779661-20885221_DDD:44055|chr15:20806100-20823500_dbVar|15:20820627-20821162_gnomAD-SV_v2.1_DEL_15_145830|chr15:20881220-20881325_dbVar|15:20945597-20946011_esv2664547|chr15:21017763-21017994_dbVar|chr15:21042050-21056300_dbVar|15:21069662-21311925_DDD:44068|chr15:21282800-21314300_dbVar|chr15:21348205-21348677_dbVar|chr15:21888050-21888102_dbVar|15:21904679-21949433_DDD:44097...;po_B_loss_someG_coord=15:20016329-23487546_dgv40e203|15:20167087-23222284_dgv94e55|15:20182203-22608281_DDD:44001|15:20575412-20599635_DDD:44041|15:20581464-20589613_esv2674516|15:20587419-20587601_gnomAD-SV_v2.1_DEL_15_145824|15:20698000-20706500_gnomAD-SV_v2.1_DEL_15_145825|chr15:20729175-20745525_dbVar|15:20749534-20773538_DDD:44053|chr15:20781000-20811000_dbVar|chr15:20820627-20821162_dbVar|chr15:20820696-20820748_dbVar|chr15:20891428-20891785_dbVar|chr15:20976350-20994050_dbVar|15:21042050-21056300_HI40:ISCA-46469|15:21042050-21056300_gnomAD-SV_v2.1_DEL_15_145837|chr15:21200932-21201488_dbVar|15:21321039-21325126_DDD:44088|15:21399090-22661412_DDD:44096|15:21888050-21888102_gnomAD-SV_v2.1_DEL_15_145844...;GC_content_left=0.31;GC_content_right=0.275;SegDup_left=15:20564282-20581643;SegDup_right=15:22292726-22423285;ENCODE_blacklist_left=15:20200401-22365100;ENCODE_blacklist_characteristics_left=High_Signal_Region;ENCODE_blacklist_right=15:22387401-22749100;ENCODE_blacklist_characteristics_right=Low_Mappability;DDD_HI_percent=93.81,.,93.81,.,.,.,92.58,.,.,.,.,.,91.86,.,.,.,76.23,75.33;ExAC_synZ=2.22375841006203,.,0.630577750419089,.,.,.,2.22375841006203,.,.,.,.,.,.,.,.,.,.,-0.271906921498889;ExAC_misZ=2.58284576037233,.,0.0606178603183018,.,.,.,2.58284576037233,.,.,.,.,.,.,.,.,.,.,-0.565772314050669;NCBI_gene_ID=.,283755,727832,729786,606,100422949,100287399,100847060,348120,654499,.,646243,100996331,440225,727924,101927079,390538,283694;HGNC_gene_ID=.,HGNC:4871,HGNC:37225,HGNC:32375,HGNC:1007,HGNC:38324,HGNC:48327,HGNC:43522,HGNC:28003,HGNC:31024,.,HGNC:33973,HGNC:33734,HGNC:38664,HGNC:53069,HGNC:56199,HGNC:15373,HGNC:15375;LOEUF_bin=8,.,8,.,.,.,8,.,.,.,.,.,9,.,.,.,9,9;GnomAD_pLI=0.35277,.,2.2875000000000003e-19,.,.,.,0.042457,.,.,.,.,.,0.35277,.,.,.,3.9447e-08,5.1332e-05;ExAC_pLI=0.57189,.,0.086864,.,.,.,0.57189,.,.,.,.,.,.,.,.,.,.,0.018051;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(17_genes,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1;END=22409391;SVLEN=-1844783	GT	1/.
15	34735950	.	G	<DEL>	.	PASS	AnnotSV_ID=15_34735950_34806953_DEL_1;SV_start=34735950;Biologist_ranking=Benign;Annotation_mode=full;CytoBand=q14;Closest_left=MIR1233-1;Closest_right=GOLGA8B;Gene_count=0;RE_gene=ACTC1_(morbid/RE=ABC_enhancer)|RYR3_(morbid/RE=ABC_enhancer)|SLC12A6_(morbid/RE=ABC_enhancer+EA_enhancer);po_P_gain_source=dbVar:nssv15172447|dbVar:nssv15125410|dbVar:nssv15172190|dbVar:nssv15149616|dbVar:nssv15147411|dbVar:nssv15150618|nssv15150717|dbVar:nssv15151655|dbVar:nssv15145681;po_P_gain_coord=15:20016812-102493540|15:20063341-102521392|15:20071674-102461162|15:20733396-102511616|15:22765629-38837526|15:22770423-102429112|15:31115048-102354857|15:32899500-35492630;po_P_gain_percent=0.09|0.09|0.09|0.09|0.44|0.09|0.10|2.74;po_P_loss_source=dbVar:nssv15147319|dbVar:nssv16208403|dbVar:nssv15127755|dbVar:nssv15148236|dbVar:nssv15127602|dbVar:nssv16208407|dbVar:nssv15154730|dbVar:nssv15146365|dbVar:nssv15146268|dbVar:nssv17976656|dbVar:nssv16208948|dbVar:nssv18788041;po_P_loss_coord=15:22698523-38381783|15:22770422-36861479|15:23622527-102521392|15:25279017-37496505|15:29209621-102521392|15:31675453-35689958|15:32446830-34868996|15:32618338-39686269|15:32928005-40526026|15:33809651-40027263|15:34197489-38656254|15:34526073-35087019;po_P_loss_percent=0.45|0.50|0.09|0.58|0.10|1.77|2.93|1.00|0.93|1.14|1.59|12.66;B_gain_source=1000g;B_gain_coord=15:34721237-34836826;B_gain_AFmax=0.0144;B_loss_source=1000g|DDD:44673|DDD:44674|HI40:ISCA-46481|HI40:ISCA-46482|dbVar|dgv2562n100|dgv313n27|dgv43e203|esv3636115|esv3892663|gnomAD-SV_v2.1_DEL_15_146738|gnomAD-SV_v2.1_DEL_15_146739|nsv517751;B_loss_coord=15:34647569-34871296|15:34674031-35008201|15:34674425-35009836|15:34678778-34862723|15:34710127-34856557|chr15:34710127-34856557|15:34710127-34856557|15:34714112-34830932|15:34718595-34807869|15:34718595-34871296|chr15:34721236-34836826|15:34721237-34836826|15:34721237-34836826|15:34726358-34872885|chr15:34726358-34872885|15:34726358-34872885;B_loss_AFmax=0.168;po_B_gain_someG_source=15:34741740-34742019_1000g;po_B_gain_someG_coord=15:34721237-34836826_1000g;po_B_loss_someG_source=15:34674031-35008201_DDD:44673|15:34678778-34862723_dgv43e203|chr15:34710127-34856557_dbVar|15:34714112-34830932_dgv2562n100|15:34718595-34807869_esv3892663|chr15:34721236-34836826_dbVar|15:34721237-34836826_esv3636115|chr15:34726358-34872885_dbVar|15:34741740-34742019_1000g|15:34741749-34742029_esv2678102|15:34741752-34742021_gnomAD-SV_v2.1_DEL_15_146741|chr15:34746988-34747300_dbVar|15:34779146-34783492_esv2667455|chr15:34785640-34786870_dbVar|15:34802473-34810922_1000g|15:34802548-34810836_DDD:44684|15:34802595-34810858_gnomAD-SV_v2.1_DEL_15_146744;po_B_loss_someG_coord=15:34647569-34871296_nsv517751|15:34674425-35009836_DDD:44674|15:34710127-34856557_HI40:ISCA-46481|15:34710127-34856557_gnomAD-SV_v2.1_DEL_15_146738|15:34718595-34800595_dgv312n27|15:34718595-34871296_dgv313n27|15:34721237-34836826_1000g|15:34726358-34872885_HI40:ISCA-46482|15:34726358-34872885_gnomAD-SV_v2.1_DEL_15_146739|chr15:34741740-34742019_dbVar|chr15:34741752-34742021_dbVar|chr15:34743793-34743843_dbVar|15:34746988-34747300_gnomAD-SV_v2.1_DEL_15_146743|15:34779302-34783300_DDD:44682|chr15:34802472-34810922_dbVar|15:34802473-34810922_esv3636118|chr15:34802595-34810858_dbVar;GC_content_left=0.34;GC_content_right=0.66;SegDup_left=15:34730084-34776964;SegDup_right=15:34782963-34820866|15:34800001-34813836;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(0_gene,_+0.00)|5F_(+0.00);ACMG_class=1;END=34806953;SVLEN=-71004	GT	1/.
16	1565630	.	T	<DUP>	.	PASS	AnnotSV_ID=16_1565630_1571297_DUP_1;SV_start=1565630;Biologist_annotation=IFT140_tandem_duplication;Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=p13.3;Gene_name=IFT140;Closest_left=TELO2;Closest_right=TMEM204;Gene_count=1;Tx=.,NM_014714;Tx_version=.,4;Tx_start=.,1560427;Tx_end=.,1662073;Overlapped_tx_length=.,5668;Overlapped_CDS_length=.,729;Overlapped_CDS_percent=.,16;Frameshift=.,no;Exon_count=.,31;Location=.,intron26-intron30;Location2=.,CDS;Dist_nearest_SS=.,488;Nearest_SS_type=.,3';Intersect_start=.,1565629;Intersect_end=.,1571297;P_gain_source=dbVar:nssv17973053;P_gain_coord=16:1568198-1570829;P_loss_source=dbVar:nssv16208781;P_loss_coord=16:1568218-1570809;po_P_gain_phen=CRANIOECTODERMAL_DYSPLASIA_5|Saldino-Mainzer_syndrome|Cranioectodermal_dysplasia|Joubert_syndrome_with_Jeune_asphyxiating_thoracic_dystrophy;po_P_gain_source=dbVar:nssv15158812|dbVar:nssv15148703|dbVar:nssv15147067|dbVar:nssv15148669|dbVar:nssv15147068|dbVar:nssv17649874|dbVar:nssv15152396|dbVar:nssv15150758|dbVar:nssv15149904|dbVar:nssv15154767|dbVar:nssv16254459|dbVar:nssv15149503|dbVar:nssv15150639|nssv15151292|dbVar:nssv15158813|dbVar:nssv15158224|dbVar:nssv15147425|dbVar:nssv15147959|dbVar:nssv15147069|dbVar:nssv15148094|dbVar:nssv15147790|dbVar:nssv8639650|dbVar:nssv15606077|dbVar:nssv18326373|dbVar:nssv15146792|dbVar:nssv15147071|dbVar:nssv15145754|dbVar:nssv15155466|dbVar:nssv17955877|dbVar:nssv18841986|CLN:513805;po_P_gain_coord=16:61452-90294632|16:69194-90274381|16:73142-11390552|16:78802-9169448|16:79942-2610461|16:84486-5251013|16:85881-11209288|16:85881-19806921|16:85881-22442007|16:85881-3216551|16:85881-5249457|16:85881-9883129|16:85882-90155062|16:88166-90163275|16:88166-90274695|16:93733-13420663|16:96767-11619372|16:96767-3264623|16:96767-4297186|16:97134-5122974|16:102840-28327676|16:109979-4316797|16:111044-6627459|16:716663-15836961|16:1271652-2283774|16:1328823-1969149|16:1505185-4415346|16:1561202-1573469|16:1565604-1571309|16:1565629-1571298;po_P_gain_percent=0.01|0.01|0.05|0.06|0.22|0.11|0.05|0.03|0.03|0.18|0.11|0.06|0.01|0.01|0.01|0.04|0.05|0.18|0.13|0.11|0.02|0.13|0.09|0.04|0.56|0.89|0.19|46.20|99.33|99.96;po_P_loss_phen=Cranioectodermal_dysplasia_5,_621180_(3)_AR|Retinitis_pigmentosa_80,_617781_(3)_AR|Short-rib_thoracic_dysplasia_9_with_or_without_polydactyly,_266920_(3)_AR|Polycystic_kidney_disease_9,_susceptibility_to,_621164_(3)_AD;po_P_loss_source=dbVar:nssv15173022|dbVar:nssv15145815|dbVar:nssv15147164|dbVar:nssv15155465|dbVar:nssv15776300|dbVar:nssv15146945|dbVar:nssv15148829|dbVar:nssv15148018|dbVar:nssv15145816|dbVar:nssv18790909|nssv18790910|dbVar:nssv15771714|dbVar:nssv16214818|dbVar:nssv18792796|dbVar:nssv16214651|morbid:IFT140;po_P_loss_coord=16:61452-1593645|16:73142-1762524|16:73142-1823350|16:85881-1875694|16:85881-2053328|16:88166-1715454|16:96723-1917328|16:96767-1594015|16:96767-2047583|16:256303-1657267|16:624056-2115656|16:624056-2148005|16:811897-2130379|16:1203719-2185710|16:1560428-1662073;po_P_loss_percent=0.37|0.34|0.32|0.32|0.29|0.35|0.31|0.38|0.29|0.40|0.38|0.37|0.43|0.58|5.58;P_snvindel_nb=14;P_snvindel_phen=Jeune_thoracic_dystrophy|Retinal_dystrophy|Retinitis_pigmentosa|Retinitis_pigmentosa_80|Saldino-Mainzer_syndrome;GC_content_left=0.52;GC_content_right=0.5;Repeat_coord_left=16:1565418-1565697|16:1565698-1565893;Repeat_type_left=AluJr|L1MEf;Repeat_coord_right=16:1571134-1571365;Repeat_type_right=AluJb;HI=.,30;DDD_HI_percent=69.24;ExAC_delZ=-1.52736818830718;ExAC_dupZ=-0.448946429663129;ExAC_cnvZ=-0.844654865976432;ExAC_synZ=-0.922111894578121;ExAC_misZ=-1.23259677674915;GenCC_disease=.,IFT140-related_recessive_ciliopathy|Jeune_syndrome|Leber_congenital_amaurosis|autosomal_dominant_polycystic_kidney_disease|retinitis_pigmentosa|retinitis_pigmentosa_80|short-rib_thoracic_dysplasia_9_with_or_without_polydactyly;GenCC_moi=.,AD|AR;GenCC_classification=.,Definitive|Strong|Supportive;GenCC_pmid=.,154653|22503633|22503633[PMID]|22503633[PMID]_23418020[PMID]_24009529[PMID]|23418020|24009529|26216056|26216056[PMID]|26968735|30479745|31034313;NCBI_gene_ID=.,9742;HGNC_gene_ID=.,HGNC:29077;OMIM_ID=614620;OMIM_phenotype=.,Cranioectodermal_dysplasia_5,_621180_(3)_AR|Retinitis_pigmentosa_80,_617781_(3)_AR|Short-rib_thoracic_dysplasia_9_with_or_without_polydactyly,_266920_(3)_AR|(Polycystic_kidney_disease_9,_susceptibility_to),_621164_(3)_AD;OMIM_inheritance=.,AD|AR;OMIM_morbid=yes;OMIM_morbid_candidate=yes;LOEUF_bin=4;GnomAD_pLI=9.914e-24;ExAC_pLI=9.1377e-18;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_gain_source,_+1.00)|2I-3_(IFT140,_+0.00)|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=5,full=5;END=1571297;SVLEN=5668	GT	1/.
16	31955077	.	C	<DUP>	.	PASS	AnnotSV_ID=16_31955077_34702366_DUP_1;SV_start=31955077;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p11.2-p11.1,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2-p11.1;Gene_name=LOC102723753|HERC2P4|TP53TG3D|LOC390705|LOC107987382|TP53TG3|SLC6A10P|TP53TG3C|LOC105369266|TP53TG3B|LOC107987386|ENPP7P13|MIR9901|CCNYL3|UBE2MP1|LOC112268173|LOC105371200|LINC01566,LOC102723753,HERC2P4,TP53TG3D,LOC390705,LOC107987382,TP53TG3,SLC6A10P,TP53TG3C,LOC105369266,TP53TG3B,LOC107987386,ENPP7P13,MIR9901,CCNYL3,UBE2MP1,LOC112268173,LOC105371200,LINC01566;Closest_left=ZNF267;Closest_right=FRG2DP;Gene_count=18;Tx=.,NR_135178,NR_109773,NM_001243722,NR_033866,NR_171659,NM_016212,NR_003083,NM_001205259,NR_158162,NM_001099687,NR_171660,NR_130771,NR_162093,NR_158158,NR_002837,NR_157261,NR_188627,NR_027080;Tx_version=.,1,1,3,1,1,5,3,3,1,4,1,1,1,1,1,1,1,2;Tx_start=.,32163432,32181363,32264606,32300867,32611681,32684850,32888793,33205546,33215160,33262081,33298270,33571843,33966044,34264719,34403801,34430129,34442319,34597786;Tx_end=.,32199434,32199434,32267249,32301302,32626892,32687486,32896463,33208179,33232409,33264719,33319296,33586742,33966140,34294699,34404762,34431919,34479081,34626084;Overlapped_tx_length=.,36002,18071,2643,435,15211,2636,7670,2633,17249,2638,21026,14899,96,29980,961,1790,36762,28298;Overlapped_CDS_length=.,0,0,375,0,0,375,0,375,0,375,0,0,0,0,0,0,0,0;Overlapped_CDS_percent=.,0,0,100,0,0,100,0,100,0,100,0,0,0,0,0,0,0,0;Frameshift=.,.,.,no,.,.,no,.,no,.,no,.,.,.,.,.,.,.,.;Exon_count=.,25,14,2,1,8,2,9,2,6,2,5,3,1,11,1,1,4,7;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,UTR,UTR,UTR,UTR;Intersect_start=.,32163432,32181363,32264606,32300867,32611681,32684850,32888793,33205546,33215160,33262081,33298270,33571843,33966044,34264719,34403801,34430129,34442319,34597786;Intersect_end=.,32199434,32199434,32267249,32301302,32626892,32687486,32896463,33208179,33232409,33264719,33319296,33586742,33966140,34294699,34404762,34431919,34479081,34626084;po_P_gain_source=dbVar:nssv15158812|dbVar:nssv15148703|dbVar:nssv15150639|nssv15151292|dbVar:nssv15158813|dbVar:nssv15158224|dbVar:nssv16216874|dbVar:nssv15126545|dbVar:nssv15133058|dbVar:nssv15126469|dbVar:nssv15150356;po_P_gain_coord=16:61452-90294632|16:69194-90274381|16:85882-90155062|16:88166-90163275|16:88166-90274695|16:5805002-34230001|16:24381954-33923059|16:30703234-35147508|16:31986099-90294753|16:34197493-64509054;po_P_gain_percent=3.04|3.05|3.05|3.05|3.05|8.00|20.63|61.82|4.66|1.67;po_P_loss_source=dbVar:nssv15141243;po_P_loss_coord=16:28826163-34375007;po_P_loss_percent=43.61;B_gain_source=.,DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47058|DDD:47062|DDD:47063|dgv50e203|esv2421440,DDD:47058|DDD:47062|DDD:47063|dgv50e203|esv2421440,1000g|DDD:47058|DDD:47062|DDD:47063|DDD:47091|IMH|dgv507e214|dgv50e203|dgv821e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|IMH|dgv50e203|dgv821e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|DDD:47114|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|DDD:47114|DDD:47116|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47114|DDD:47116|DDD:47126|DDD:47131|DDD:47136|dgv50e203|dgv821e212|nsv514803,dgv50e203,TS40:ISCA-37481|dgv51e203|nsv516385,TS40:ISCA-37481|dgv51e203|nsv516385,TS40:ISCA-37481|dgv117e55|dgv51e203|nsv516385,TS40:ISCA-37481|dgv117e55|dgv2962n100|dgv51e203|nsv516385,1000g|DDD:47173|DDD:47179|DDD:47183|TS40:ISCA-37481|dgv117e55|dgv2962n100|dgv51e203|dgv824e212|esv2421698|esv3638500|gnomAD-SV_v2.1_DUP_16_42078|gnomAD-SV_v2.1_DUP_16_42081|nsv514804|nsv516385;B_gain_coord=.,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32345385-33344188|16:32511180-33912324|16:32589803-32684945|16:32611030-32642738|16:32611030-32642738|16:32611030-32642738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32345385-33344188|16:32511180-33912324,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32345385-33344188|16:32511180-33912324,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738|16:33230271-33739925,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738|16:33230271-33739925|16:33270420-33827235,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32511180-33912324|16:33230271-33739925|16:33270420-33827235|16:33302092-33630727|16:33473790-33628580|16:33526621-33659628|16:33560604-33662009,16:31749454-34012168,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859|16:34410570-34796531,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859|16:34410570-34796531|16:34441796-34784591,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859|16:34410570-34796531|16:34441796-34784591|16:34445084-34774280|16:34456525-34736855|16:34457086-34712399|16:34457086-34712399|16:34465000-34757000|16:34470705-34757071|16:34471852-34731191|16:34476781-34747070|16:34567146-34656231|16:34572795-34661165;B_gain_AFmax=.,0.1314,0.1314,0.1314,0.1314,0.8086,0.3314,0.3314,0.3314,0.3314,0.3314,0.515,0.515,0.07,0.06,0.06,0.09,0.09,0.1875;B_loss_source=.,DDD:47057|DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47057|DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47057|DDD:47058|DDD:47062|DDD:47063|dgv50e203|esv2421440,DDD:47057|DDD:47058|DDD:47062|DDD:47063|DDD:47074|dgv50e203|esv2421440,DDD:47058|DDD:47062|DDD:47063|DDD:47074|DDD:47081|DDD:47087|DDD:47091|DDD:47092|dbVar|dgv50e203|dgv819e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|DDD:47074|HI40:ISCA-46492|dbVar|dgv50e203|dgv819e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47058|DDD:47062|DDD:47113|dgv50e203,DDD:47058|DDD:47062|DDD:47113|dgv50e203,DDD:47058|DDD:47062|DDD:47113|DDD:47114|dgv50e203,DDD:47058|DDD:47062|DDD:47113|DDD:47114|dgv50e203,DDD:47058|DDD:47062|DDD:47114|DDD:47126|dgv50e203,dgv50e203,HI40:ISCA-37481|dbVar,HI40:ISCA-37481|dbVar,HI40:ISCA-37481|dbVar,HI40:ISCA-37481,HI40:ISCA-37481|dbVar;B_loss_coord=.,16:31749454-34012168|16:32052946-32496748|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32052946-32496748|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32052946-32496748|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406,16:31749454-34012168|16:32052946-32496748|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32298051-32812316,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32298051-32812316|16:32485788-32648832|16:32511180-32878155|16:32541493-32648861|16:32589803-32684945|16:32590685-32653097|chr16:32611029-32642738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32298051-32812316|16:32511180-32878155|16:32656000-32802000|chr16:32656000-32802000,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738|16:33230271-33739925,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738|16:33230271-33739925,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33230271-33739925|16:33473790-33628580,16:31749454-34012168,chr16:34197000-34310700|chr16:34197000-34434000|16:34202089-35147508,chr16:34197000-34434000|16:34202089-35147508,chr16:34197000-34434000|16:34202089-35147508,16:34202089-35147508,16:34202089-35147508|chr16:34457085-34712399;B_loss_AFmax=.,0.1692,0.1692,0.23,0.23,0.23,0.23,0.1692,0.0715,0.0715,0.1243,0.1243,0.1243,0.05,0.01,0.01,0.01,.,0.01;B_inv_source=IMH;B_inv_coord=16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460;B_inv_AFmax=0.4996;po_B_gain_someG_source=16:31985111-31985155_DDD:47053|16:32020000-32026200_gnomAD-SV_v2.1_DUP_16_42021|16:32020000-32096000_gnomAD-SV_v2.1_DUP_16_42022|16:32123333-33664028_DDD:47062|16:32193431-32193767_DDD:47069|16:32232000-32237100_gnomAD-SV_v2.1_DUP_16_42027|16:32328772-32370968_1000g|16:32328772-32370968_dgv504e214|16:32366482-32410672_1000g|16:32366482-32410672_dgv505e214|16:32418984-32469917_1000g|16:32454389-32457877_IMH|16:32486529-32486871_DDD:47082|16:32511180-33912324_dgv821e212|16:32611030-32642738_1000g|16:32611030-32642738_dgv507e214|16:32740800-32750700_gnomAD-SV_v2.1_DUP_16_42037|16:32831660-32863935_1000g|16:32831660-32863935_dgv508e214|16:32903492-32927819_1000g...;po_B_gain_someG_coord=16:31749454-34012168_dgv50e203|16:31989000-32033000_gnomAD-SV_v2.1_DUP_16_42016|16:32020000-32096000_TS40:ISCA-46491|16:32055083-33851279_DDD:47058|16:32129166-32904510_DDD:47063|16:32202950-32209100_gnomAD-SV_v2.1_DUP_16_42026|16:32257510-32714406_esv2421440|16:32328772-32370968_1000g|16:32345385-33344188_IMH|16:32366482-32410672_1000g|16:32418984-32469917_1000g|16:32418984-32469917_dgv506e214|16:32473116-32486576_DDD:47080|16:32489448-32622550_dgv4e224|16:32589803-32684945_DDD:47091|16:32611030-32642738_1000g|16:32684868-32688916_DDD:47098|16:32831660-32863935_1000g|16:32831660-32863935_1000g|16:32900256-32908555_nsv514802...;po_B_loss_someG_source=chr16:31933999-31991400_dbVar|chr16:31986799-32041500_dbVar|chr16:31998194-32020170_dbVar|chr16:32036000-32041500_dbVar|16:32055083-33851279_DDD:47058|16:32129166-32904510_DDD:47063|chr16:32289883-32289979_dbVar|16:32298051-32812316_DDD:47074|chr16:32328771-32370968_dbVar|chr16:32366481-32410672_dbVar|chr16:32393247-32393542_dbVar|chr16:32473466-32473664_dbVar|16:32485788-32648832_DDD:47081|16:32489448-32622550_dgv4e224|chr16:32494596-32496820_dbVar|chr16:32511665-32511727_dbVar|16:32524651-32525229_IMH|16:32532282-32533735_IMH|16:32562331-32601372_IMH|chr16:32586298-32586783_dbVar...;po_B_loss_someG_coord=16:31749454-34012168_dgv50e203|chr16:31971409-31971474_dbVar|chr16:31986800-31999150_dbVar|chr16:32010600-32020000_dbVar|16:32052946-32496748_DDD:47057|16:32123333-33664028_DDD:47062|16:32257510-32714406_esv2421440|chr16:32294372-32294452_dbVar|chr16:32312790-32313754_dbVar|16:32328772-32370968_1000g|chr16:32373626-32373758_dbVar|chr16:32418983-32469917_dbVar|chr16:32485126-32485204_dbVar|16:32486808-32486871_DDD:47084|chr16:32491490-32496732_dbVar|16:32511180-32878155_dgv819e212|16:32518848-32519371_IMH|16:32525918-32525974_IMH|16:32541493-32648861_DDD:47087|16:32562341-32600296_IMH...;GC_content_left=0.225;GC_content_right=0.335;Repeat_coord_left=16:31948879-31955047|16:31955090-31955836;Repeat_type_left=L1PA3|L1M4c;DDD_HI_percent=94.39,.,.,92.49,.,.,94.39,.,91.96,.,92.24,.,.,.,.,.,.,.,.;ExAC_synZ=1.56757328357025,.,.,1.56757328357025,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;ExAC_misZ=2.11426077975333,.,.,2.11426077975333,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;NCBI_gene_ID=.,.,100289574,729264,.,.,24150,386757,653550,.,729355,.,.,113218496,102724928,606551,.,.,283914;HGNC_gene_ID=.,.,HGNC:4872,HGNC:44657,.,.,HGNC:30759,HGNC:11043,HGNC:42962,.,HGNC:37202,.,.,HGNC:53993,HGNC:33206,HGNC:32195,.,.,HGNC:27555;LOEUF_bin=9,.,.,9,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;GnomAD_pLI=0.0075995,.,.,0.0075995,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;ExAC_pLI=0.64106,.,.,0.64106,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2G_(cf_po_B_gain_someG_source,_+0.00)|3A_(18_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3;END=34702366;SVLEN=2747290	GT	1/.
16	32471626	.	C	<DEL>	.	PASS	AnnotSV_ID=16_32471626_33487672_DEL_1;SV_start=32471626;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split;CytoBand=p11.2;Gene_name=LOC107987382|TP53TG3|SLC6A10P|TP53TG3C|LOC105369266|TP53TG3B|LOC107987386,LOC107987382,TP53TG3,SLC6A10P,TP53TG3C,LOC105369266,TP53TG3B,LOC107987386;Closest_left=LOC390705;Closest_right=ENPP7P13;Gene_count=7;Tx=.,NR_171659,NM_016212,NR_003083,NM_001205259,NR_158162,NM_001099687,NR_171660;Tx_version=.,1,5,3,3,1,4,1;Tx_start=.,32611681,32684850,32888793,33205546,33215160,33262081,33298270;Tx_end=.,32626892,32687486,32896463,33208179,33232409,33264719,33319296;Overlapped_tx_length=.,15211,2636,7670,2633,17249,2638,21026;Overlapped_CDS_length=.,0,375,0,375,0,375,0;Overlapped_CDS_percent=.,0,100,0,100,0,100,0;Frameshift=.,.,no,.,no,.,no,.;Exon_count=.,8,2,9,2,6,2,5;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR;Intersect_start=.,32611681,32684850,32888793,33205546,33215160,33262081,33298270;Intersect_end=.,32626892,32687486,32896463,33208179,33232409,33264719,33319296;po_P_gain_source=dbVar:nssv15158812|dbVar:nssv15148703|dbVar:nssv15150639|nssv15151292|dbVar:nssv15158813|dbVar:nssv15158224|dbVar:nssv16216874|dbVar:nssv15126545|dbVar:nssv15133058|dbVar:nssv15126469;po_P_gain_coord=16:61452-90294632|16:69194-90274381|16:85882-90155062|16:88166-90163275|16:88166-90274695|16:5805002-34230001|16:24381954-33923059|16:30703234-35147508|16:31986099-90294753;po_P_gain_percent=1.13|1.13|1.13|1.13|1.13|3.57|10.65|22.86|1.74;po_P_loss_source=dbVar:nssv15141243;po_P_loss_coord=16:28826163-34375007;po_P_loss_percent=18.31;B_gain_source=DDD:47058|DDD:47062|dgv50e203,1000g|DDD:47058|DDD:47062|DDD:47063|DDD:47091|IMH|dgv507e214|dgv50e203|dgv821e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|IMH|dgv50e203|dgv821e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|DDD:47114|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|DDD:47114|DDD:47116|IMH|dgv50e203|dgv821e212;B_gain_coord=16:31749454-34012168|16:32055083-33851279|16:32123333-33664028,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32345385-33344188|16:32511180-33912324|16:32589803-32684945|16:32611030-32642738|16:32611030-32642738|16:32611030-32642738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32345385-33344188|16:32511180-33912324,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32345385-33344188|16:32511180-33912324,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738|16:33230271-33739925,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738|16:33230271-33739925|16:33270420-33827235;B_gain_AFmax=0.07,0.8086,0.3314,0.3314,0.3314,0.3314,0.3314,0.515;B_loss_source=DDD:47058|DDD:47062|dgv50e203,DDD:47058|DDD:47062|DDD:47063|DDD:47074|DDD:47081|DDD:47087|DDD:47091|DDD:47092|dbVar|dgv50e203|dgv819e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|DDD:47074|HI40:ISCA-46492|dbVar|dgv50e203|dgv819e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47058|DDD:47062|DDD:47113|dgv50e203,DDD:47058|DDD:47062|DDD:47113|dgv50e203,DDD:47058|DDD:47062|DDD:47113|DDD:47114|dgv50e203,DDD:47058|DDD:47062|DDD:47113|DDD:47114|dgv50e203;B_loss_coord=16:31749454-34012168|16:32055083-33851279|16:32123333-33664028,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32298051-32812316|16:32485788-32648832|16:32511180-32878155|16:32541493-32648861|16:32589803-32684945|16:32590685-32653097|chr16:32611029-32642738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32298051-32812316|16:32511180-32878155|16:32656000-32802000|chr16:32656000-32802000,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738|16:33230271-33739925,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738|16:33230271-33739925;B_loss_AFmax=0.0715,0.23,0.23,0.1692,0.0715,0.0715,0.1243,0.1243;B_inv_source=IMH;B_inv_coord=16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560;B_inv_AFmax=0.4996;po_B_gain_someG_source=16:32055083-33851279_DDD:47058|16:32129166-32904510_DDD:47063|16:32345385-33344188_IMH|16:32486529-32486871_DDD:47082|16:32511180-33912324_dgv821e212|16:32611030-32642738_1000g|16:32611030-32642738_dgv507e214|16:32740800-32750700_gnomAD-SV_v2.1_DUP_16_42037|16:32831660-32863935_1000g|16:32831660-32863935_dgv508e214|16:32903492-32927819_1000g|16:33204449-33378738_DDD:47113|16:33231300-33237300_gnomAD-SV_v2.1_DUP_16_42041|16:33286000-33293700_gnomAD-SV_v2.1_DUP_16_42046|16:33376004-33548487_DDD:47124|16:33446164-33480261_1000g|16:33446164-33480261_dgv510e214|16:33470756-33495606_1000g|16:33470756-33495606_dgv511e214|16:33484522-33543753_1000g...;po_B_gain_someG_coord=16:31749454-34012168_dgv50e203|16:32123333-33664028_DDD:47062|16:32257510-32714406_esv2421440|16:32473116-32486576_DDD:47080|16:32489448-32622550_dgv4e224|16:32589803-32684945_DDD:47091|16:32611030-32642738_1000g|16:32684868-32688916_DDD:47098|16:32831660-32863935_1000g|16:32831660-32863935_1000g|16:32900256-32908555_nsv514802|16:32903492-32927819_dgv509e214|16:33230271-33739925_DDD:47114|16:33270420-33827235_DDD:47116|16:33302092-33630727_nsv514803|16:33406659-33406773_IMH|16:33446164-33480261_1000g|16:33464249-33499453_DDD:47125|16:33470756-33495606_1000g|16:33473790-33628580_DDD:47126...;po_B_loss_someG_source=16:32052946-32496748_DDD:47057|16:32123333-33664028_DDD:47062|16:32257510-32714406_esv2421440|chr16:32473466-32473664_dbVar|16:32485788-32648832_DDD:47081|16:32489448-32622550_dgv4e224|chr16:32494596-32496820_dbVar|chr16:32511665-32511727_dbVar|16:32524651-32525229_IMH|16:32532282-32533735_IMH|16:32562331-32601372_IMH|chr16:32586298-32586783_dbVar|16:32588181-32590788_1000g|16:32589803-32684945_DDD:47091|chr16:32598581-32602963_dbVar|16:32598582-32602963_esv3638436|16:32600138-32601847_IMH|16:32600306-32601869_1000g|16:32600344-32601845_IMH|chr16:32611029-32642738_dbVar...;po_B_loss_someG_coord=16:31749454-34012168_dgv50e203|16:32055083-33851279_DDD:47058|16:32129166-32904510_DDD:47063|16:32298051-32812316_DDD:47074|chr16:32485126-32485204_dbVar|16:32486808-32486871_DDD:47084|chr16:32491490-32496732_dbVar|16:32511180-32878155_dgv819e212|16:32518848-32519371_IMH|16:32525918-32525974_IMH|16:32541493-32648861_DDD:47087|16:32562341-32600296_IMH|chr16:32588180-32590788_dbVar|16:32588181-32590788_esv3638433|16:32590685-32653097_DDD:47092|16:32598582-32602963_1000g|chr16:32598863-32598991_dbVar|chr16:32600305-32601869_dbVar|16:32600306-32601869_esv3638437|16:32600531-32601385_IMH...;GC_content_left=0.255;GC_content_right=0.275;Repeat_coord_left=16:32471562-32471589;Repeat_type_left=AT_rich;SegDup_left=16:32328196-32493021|16:32333061-32489849|16:32333061-32492391|16:32462184-32472474;SegDup_right=16:33363548-33517471|16:33465320-33517471|16:33466597-33509202;DDD_HI_percent=94.39,.,94.39,.,91.96,.,92.24,.;NCBI_gene_ID=.,.,24150,386757,653550,.,729355,.;HGNC_gene_ID=.,.,HGNC:30759,HGNC:11043,HGNC:42962,.,HGNC:37202,.;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(7_genes,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1;END=33487672;SVLEN=-1016047	GT	1/.
16	33371444	.	A	<DUP>	.	PASS	AnnotSV_ID=16_33371444_34285848_DUP_1;SV_start=33371444;Biologist_ranking=Benign;Annotation_mode=full,split,split,split;CytoBand=p11.2;Gene_name=ENPP7P13|MIR9901|CCNYL3,ENPP7P13,MIR9901,CCNYL3;Closest_left=LOC107987386;Closest_right=UBE2MP1;Gene_count=3;Tx=.,NR_130771,NR_162093,NR_158158;Tx_version=.,1,1,1;Tx_start=.,33571843,33966044,34264719;Tx_end=.,33586742,33966140,34294699;Overlapped_tx_length=.,14899,96,21129;Overlapped_CDS_length=.,0,0,0;Overlapped_CDS_percent=.,0,0,0;Exon_count=.,3,1,11;Location=.,txStart-txEnd,txStart-txEnd,txStart-intron9;Location2=.,UTR,UTR,UTR;Dist_nearest_SS=.,.,.,82;Nearest_SS_type=.,.,.,5';Intersect_start=.,33571843,33966044,34264719;Intersect_end=.,33586742,33966140,34285848;po_P_gain_source=dbVar:nssv15158812|dbVar:nssv15148703|dbVar:nssv15150639|nssv15151292|dbVar:nssv15158813|dbVar:nssv15158224|dbVar:nssv16216874|dbVar:nssv15126545|dbVar:nssv15133058|dbVar:nssv15126469|dbVar:nssv15150356;po_P_gain_coord=16:61452-90294632|16:69194-90274381|16:85882-90155062|16:88166-90163275|16:88166-90274695|16:5805002-34230001|16:24381954-33923059|16:30703234-35147508|16:31986099-90294753|16:34197493-64509054;po_P_gain_percent=1.01|1.01|1.02|1.02|1.01|3.02|5.78|20.57|1.57|0.29;po_P_loss_source=dbVar:nssv15141243;po_P_loss_coord=16:28826163-34375007;po_P_loss_percent=16.48;B_gain_source=.,DDD:47058|DDD:47062|DDD:47114|DDD:47116|DDD:47126|DDD:47131|DDD:47136|dgv50e203|dgv821e212|nsv514803,dgv50e203,TS40:ISCA-37481|dgv51e203|nsv516385;B_gain_coord=.,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32511180-33912324|16:33230271-33739925|16:33270420-33827235|16:33302092-33630727|16:33473790-33628580|16:33526621-33659628|16:33560604-33662009,16:31749454-34012168,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859;B_gain_AFmax=.,0.515,0.07,0.06;B_loss_source=.,DDD:47058|DDD:47062|DDD:47114|DDD:47126|dgv50e203,dgv50e203,HI40:ISCA-37481|dbVar;B_loss_coord=.,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33230271-33739925|16:33473790-33628580,16:31749454-34012168,chr16:34197000-34310700|chr16:34197000-34434000|16:34202089-35147508;B_loss_AFmax=.,0.1243,0.05,0.01;B_inv_source=IMH;B_inv_coord=16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460;B_inv_AFmax=0.4996;po_B_gain_someG_source=16:32055083-33851279_DDD:47058|16:32511180-33912324_dgv821e212|16:33230271-33739925_DDD:47114|16:33302092-33630727_nsv514803|16:33406659-33406773_IMH|16:33446164-33480261_1000g|16:33464249-33499453_DDD:47125|16:33470756-33495606_1000g|16:33473790-33628580_DDD:47126|16:33484522-33543753_1000g|16:33524566-33570784_1000g|16:33524566-33570784_dgv513e214|16:33560604-33662009_DDD:47136|16:33588533-33626594_1000g|16:33588533-33626594_dgv514e214|16:33870630-33923125_esv3892830|16:33961733-33961778_DDD:47155|16:33983829-34200953_DDD:47158|16:34202089-35147508_TS40:ISCA-37481|;po_B_gain_someG_coord=16:31749454-34012168_dgv50e203|16:32123333-33664028_DDD:47062|16:33204449-33378738_DDD:47113|16:33270420-33827235_DDD:47116|16:33376004-33548487_DDD:47124|16:33446164-33480261_1000g|16:33446164-33480261_dgv510e214|16:33470756-33495606_1000g|16:33470756-33495606_dgv511e214|16:33484522-33543753_1000g|16:33484522-33543753_dgv512e214|16:33524566-33570784_1000g|16:33526621-33659628_DDD:47131|16:33582387-33629628_DDD:47138|16:33588533-33626594_1000g|16:33783303-33785890_DDD:47148|16:33879457-33912806_esv3892831|16:33961808-33964212_DDD:47156|16:34197352-35283226_dgv51e203|16:34259806-34805859_nsv516385;po_B_loss_someG_source=16:32055083-33851279_DDD:47058|16:33204449-33378738_DDD:47113|chr16:33429584-33429643_dbVar|16:33433594-33433957_gnomAD-SV_v2.1_DEL_16_153879|chr16:33462282-33462339_dbVar|16:33464249-33499453_DDD:47125|chr16:33470755-33495606_dbVar|16:33473790-33628580_DDD:47126|16:33486471-33490892_DDD:47128|chr16:33524565-33570784_dbVar|16:33537417-33539750_esv2656732|chr16:33545163-33547147_dbVar|chr16:33559201-33559298_dbVar|chr16:33560642-33560933_dbVar|16:33582387-33629628_DDD:47138|16:33586836-33590310_1000g|chr16:33588532-33626594_dbVar|16:33589117-33599697_1000g|chr16:33597522-33597696_dbVar|16:33604896-33605259_gnomAD-SV_v2.1_DEL_16_153891...;po_B_loss_someG_coord=16:31749454-34012168_dgv50e203|16:32123333-33664028_DDD:47062|16:33230271-33739925_DDD:47114|chr16:33433594-33433957_dbVar|chr16:33446163-33480261_dbVar|16:33462282-33462339_gnomAD-SV_v2.1_DEL_16_153880|chr16:33467950-33468051_dbVar|chr16:33472157-33472229_dbVar|chr16:33484521-33543753_dbVar|chr16:33509280-33509607_dbVar|chr16:33529598-33529692_dbVar|chr16:33543857-33545591_dbVar|chr16:33556576-33556850_dbVar|16:33559201-33559298_gnomAD-SV_v2.1_DEL_16_153886|chr16:33564729-33565655_dbVar|chr16:33586835-33590310_dbVar|16:33586836-33590310_esv3638472|chr16:33589116-33599697_dbVar|16:33589117-33599697_esv3638477|chr16:33604896-33605259_dbVar...;GC_content_left=0.43;GC_content_right=0.365;Repeat_coord_left=16:33371221-33371434;Repeat_type_left=AluSz6;SegDup_left=16:33241272-33372204|16:33325624-33372204|16:33330495-33372204|16:33330495-33372204|16:33342946-33372204|16:33353245-33373923|16:33355202-33372204|16:33363548-33517471;ENCODE_blacklist_left=16:32923001-33427100;ENCODE_blacklist_characteristics_left=High_Signal_Region;NCBI_gene_ID=.,.,113218496,102724928;HGNC_gene_ID=.,.,HGNC:53993,HGNC:33206;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2G_(cf_po_B_gain_someG_source,_+0.00)|2L_(CCNYL3,_+0.00)|3A_(3_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=3,full=3,full=3,full=3;END=34285848;SVLEN=914405	GT	1/.
16	34493207	.	C	<DUP>	.	PASS	AnnotSV_ID=16_34493207_34702366_DUP_1;SV_start=34493207;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=p11.2-p11.1;Gene_name=LINC01566;Closest_left=LOC105371200;Closest_right=FRG2DP;Gene_count=1;Tx=.,NR_027080;Tx_version=.,2;Tx_start=.,34597786;Tx_end=.,34626084;Overlapped_tx_length=.,28298;Overlapped_CDS_length=.,0;Overlapped_CDS_percent=.,0;Exon_count=.,7;Location=.,txStart-txEnd;Location2=.,UTR;Intersect_start=.,34597786;Intersect_end=.,34626084;po_P_gain_source=dbVar:nssv15158812|dbVar:nssv15148703|dbVar:nssv15150639|nssv15151292|dbVar:nssv15158813|dbVar:nssv15158224|dbVar:nssv15133058|dbVar:nssv15126469|dbVar:nssv15150356;po_P_gain_coord=16:61452-90294632|16:69194-90274381|16:85882-90155062|16:88166-90163275|16:88166-90274695|16:30703234-35147508|16:31986099-90294753|16:34197493-64509054;po_P_gain_percent=0.23|0.23|0.23|0.23|0.23|4.71|0.36|0.69;B_gain_source=1000g|DDD:47173|DDD:47179|TS40:ISCA-37481|dgv117e55|dgv2962n100|dgv51e203|dgv824e212|esv2421698|esv3638500|gnomAD-SV_v2.1_DUP_16_42078|nsv514804|nsv516385,1000g|DDD:47173|DDD:47179|DDD:47183|TS40:ISCA-37481|dgv117e55|dgv2962n100|dgv51e203|dgv824e212|esv2421698|esv3638500|gnomAD-SV_v2.1_DUP_16_42078|gnomAD-SV_v2.1_DUP_16_42081|nsv514804|nsv516385;B_gain_coord=16:34197352-35283226|16:34202089-35147508|16:34259806-34805859|16:34410570-34796531|16:34441796-34784591|16:34445084-34774280|16:34456525-34736855|16:34457086-34712399|16:34457086-34712399|16:34465000-34757000|16:34470705-34757071|16:34471852-34731191|16:34476781-34747070,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859|16:34410570-34796531|16:34441796-34784591|16:34445084-34774280|16:34456525-34736855|16:34457086-34712399|16:34457086-34712399|16:34465000-34757000|16:34470705-34757071|16:34471852-34731191|16:34476781-34747070|16:34567146-34656231|16:34572795-34661165;B_gain_AFmax=0.1875;B_loss_source=HI40:ISCA-37481|dbVar;B_loss_coord=16:34202089-35147508|chr16:34457085-34712399;B_loss_AFmax=0.01;B_inv_source=IMH;B_inv_coord=16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460;B_inv_AFmax=0.4996;po_B_gain_someG_source=16:34202089-35147508_TS40:ISCA-37481|16:34410570-34796531_dgv117e55|16:34445084-34774280_dgv824e212|16:34457086-34712399_1000g|16:34465000-34757000_gnomAD-SV_v2.1_DUP_16_42078|16:34471852-34731191_nsv514804|16:34567146-34656231_DDD:47183|;po_B_gain_someG_coord=16:34197352-35283226_dgv51e203|16:34259806-34805859_nsv516385|16:34441796-34784591_dgv2962n100|16:34456525-34736855_DDD:47173|16:34457086-34712399_esv3638500|16:34470705-34757071_esv2421698|16:34476781-34747070_DDD:47179|16:34572795-34661165_gnomAD-SV_v2.1_DUP_16_42081;po_B_loss_someG_source=chr16:34457085-34712399_dbVar|chr16:34513700-34518239_dbVar|chr16:34521342-34521422_dbVar|chr16:34530127-34530478_dbVar|chr16:34539678-34540320_dbVar|chr16:34563433-34571562_dbVar|chr16:34590029-34590133_dbVar|chr16:34590961-34591436_dbVar|chr16:34604209-34604282_dbVar|chr16:34659877-34659999_dbVar|chr16:34666766-34667080_dbVar|chr16:34687510-34703789_dbVar;po_B_loss_someG_coord=16:34202089-35147508_HI40:ISCA-37481|chr16:34502223-34502386_dbVar|chr16:34515750-34515813_dbVar|chr16:34530038-34530588_dbVar|chr16:34539652-34540292_dbVar|16:34539693-34540322_DDD:47181|chr16:34568138-34568693_dbVar|chr16:34590565-34590648_dbVar|chr16:34600723-34610152_dbVar|chr16:34655648-34655724_dbVar|chr16:34664288-34664480_dbVar|chr16:34684662-34685228_dbVar;GC_content_left=0.385;GC_content_right=0.335;NCBI_gene_ID=.,283914;HGNC_gene_ID=.,HGNC:27555;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|3A_(1_gene,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=34702366;SVLEN=209160	GT	1/.
17	14100119	.	T	<DUP>	.	PASS	AnnotSV_ID=17_14100119_15442066_DUP_1;SV_start=14100119;Biologist_annotation=PMP22_(CMT1A);Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p12;Gene_name=COX10|CDRT15|HS3ST3B1|MGC12916|CDRT7|LOC101928475|CDRT8|PMP22|MIR4731|TEKT3|CDRT4|TVP23C-CDRT4|CDRT3|TVP23C,COX10,CDRT15,HS3ST3B1,MGC12916,CDRT7,LOC101928475,CDRT8,PMP22,MIR4731,TEKT3,CDRT4,TVP23C-CDRT4,CDRT3,TVP23C;Closest_left=COX10-DT;Closest_right=FBXW10B;Gene_count=14;Tx=.,NM_001303,NM_001007530,NM_006041,NR_026880,NR_033371,NR_135638,NR_103559,NM_000304,NR_039884,NM_031898,NM_001204477,NM_001204478,NR_146601,NM_145301;Tx_version=.,4,3,3,1,1,1,1,4,1,3,2,2,1,3;Tx_start=.,13972820,14138989,14204397,14207056,14934291,14954671,15008301,15133095,15154943,15207128,15339331,15339331,15373624,15405577;Tx_end=.,14111994,14140179,14252721,14209062,14935274,14955593,15009504,15168643,15155013,15244914,15370935,15466797,15374150,15466797;Overlapped_tx_length=.,11876,1190,48324,2006,983,922,1203,35548,70,37786,31604,102735,526,36489;Overlapped_CDS_length=.,404,567,1173,0,0,0,0,483,0,1473,459,33,0,369;Overlapped_CDS_percent=.,30,100,100,0,0,0,0,100,0,100,100,6,0,44;Frameshift=.,yes,no,no,.,.,.,.,no,.,no,no,no,.,no;Exon_count=.,7,3,2,1,3,1,2,5,1,9,4,7,1,6;Location=.,intron6-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,intron5-txEnd,txStart-txEnd,intron5-txEnd;Location2=.,CDS-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,CDS-3'UTR,UTR,CDS-3'UTR;Dist_nearest_SS=.,4580,.,.,.,.,.,.,.,.,.,.,7032,.,7032;Nearest_SS_type=.,5',.,.,.,.,.,.,.,.,.,.,5',.,5';Intersect_start=.,14100118,14138989,14204397,14207056,14934291,14954671,15008301,15133095,15154943,15207128,15339331,15339331,15373624,15405577;Intersect_end=.,14111994,14140179,14252721,14209062,14935274,14955593,15009504,15168643,15155013,15244914,15370935,15442066,15374150,15442066;RE_gene=ABCG8_(morbid/RE=mTL_miRNA)|ACBD5_(morbid/RE=mTL_miRNA)|ACVRL1_(HI=3/morbid/RE=mTL_miRNA)|AMH_(morbid/RE=mTL_miRNA)|ANKS6_(morbid/RE=mTL_miRNA)|ATL3_(morbid/RE=mTL_miRNA)|ATP9A_(morbid/RE=mTL_miRNA)|CABP4_(morbid/RE=mTL_miRNA)|CACNA1C_(morbid/RE=mTL_miRNA)|CACNA2D1_(morbid/RE=mTL_miRNA)|CAVIN1_(morbid/RE=mTL_miRNA)|CD4_(morbid/RE=mTL_miRNA)|CDT1_(morbid/RE=mTL_miRNA)|CEP104_(morbid/RE=mTL_miRNA)|CHD7_(HI=3/morbid/RE=mTL_miRNA)|CHEK1_(morbid/RE=mTL_miRNA)|CHST6_(morbid/RE=mTL_miRNA)|CISD2_(morbid/RE=mTL_miRNA)|CPT1A_(morbid/RE=mTL_miRNA)|CREB1_(morbid/RE=mTL_miRNA)|CRIPT_(morbid/RE=mTL_miRNA)|CYB5A_(morbid/RE=mTL_miRNA)|CYCS_(morbid/RE=mTL_miRNA)|DNAJB13_(morbid/RE=mTL_miRNA)|DNAJB4_(morbid/RE=mTL_miRNA)|DNAL1_(morbid/RE=mTL_miRNA)|DPP9_(morbid/RE=mTL_miRNA)|EIF2B2_(morbid/RE=mTL_miRNA)|ELAC2_(morbid/RE=ABC_enhancer)|EMC1_(morbid/RE=mTL_miRNA)|FANCA_(morbid/RE=mTL_miRNA)|GAN_(morbid/RE=mTL_miRNA)|GATAD2B_(HI=3/morbid/RE=mTL_miRNA)|GNB5_(morbid/RE=mTL_miRNA)|GOLGA2_(morbid/RE=mTL_miRNA)|GPRC5B_(morbid/RE=mTL_miRNA)|HCFC1_(morbid/RE=mTL_miRNA)|HCN4_(morbid/RE=mTL_miRNA)|HFE_(morbid/RE=mTL_miRNA)|IKBKG_(HI=3/morbid/RE=mTL_miRNA)|IRAK4_(morbid/RE=mTL_miRNA)|ISCA2_(morbid/RE=mTL_miRNA)|KCND3_(morbid/RE=mTL_miRNA)|KCNH2_(HI=3/morbid/RE=mTL_miRNA)|KDM6B_(HI=3/morbid/RE=mTL_miRNA)|KIAA1549_(morbid/RE=mTL_miRNA)|LDHD_(morbid/RE=mTL_miRNA)|LIAS_(morbid/RE=mTL_miRNA)|LNPK_(morbid/RE=mTL_miRNA)|LRTOMT_(morbid/RE=mTL_miRNA)...;P_gain_source=dbVar:nssv15123319|nssv18792872|dbVar:nssv15123460|dbVar:nssv15124534|dbVar:nssv15130870|dbVar:nssv15132574|nssv15139980|nssv16091758|dbVar:nssv15143888|dbVar:nssv15144711|dbVar:nssv15605910|dbVar:nssv15770494|dbVar:nssv15770609|dbVar:nssv15770794|dbVar:nssv16216948|dbVar:nssv17171394|dbVar:nssv17171395|dbVar:nssv17171396|dbVar:nssv17517518|dbVar:nssv17968761|dbVar:nssv17971796|dbVar:nssv18788963,.,.,.,.,.,.,.,dbVar:nssv15130870|dbVar:nssv15770494|dbVar:nssv15770609|dbVar:nssv15770794|dbVar:nssv17171395|dbVar:nssv17171396|dbVar:nssv17517518|dbVar:nssv17971796|dbVar:nssv18788963,.,.,.,.,.,.;P_gain_coord=17:14104013-15422557|17:14111773-15442066|17:14139890-15406546|17:14413313-15169915|17:15036413-15036413|17:15132095-15169674|17:15133085-15164054|17:15133095-15164078|17:15133097-15165152|17:15133098-15164054|17:15133961-15169915|17:15134215-15162530|17:15134215-15164064|17:15134229-15164050|17:15134234-15164044|17:15134235-15164044|17:15142769-15164064|17:15142779-15164054|17:15162412-15406546,.,.,.,.,.,.,.,17:15133097-15165152|17:15133098-15164054|17:15134215-15162530|17:15134215-15164064|17:15134229-15164050|17:15134234-15164044|17:15134235-15164044|17:15142769-15164064|17:15142779-15164054,.,.,.,.,.,.;P_loss_phen=?Neuropathy,_inflammatory_demyelinating,_139393_(3)_?AD|Charcot-Marie-Tooth_disease,_type_1A,_118220_(3)_AD|Charcot-Marie-Tooth_disease,_type_1E,_118300_(3)_AD|Dejerine-Sottas_disease,_145900_(3)_AD,AR|Neuropathy,_recurrent,_with_pressure_palsies,_162500_(3)_AD|Roussy-Levy_syndrome,_180800_(3)_AD|Spermatogenic_failure_81,_620277_(3)_AR,.,.,.,.,.,.,.,?Neuropathy,_inflammatory_demyelinating,_139393_(3)_?AD|Charcot-Marie-Tooth_disease,_type_1A,_118220_(3)_AD|Charcot-Marie-Tooth_disease,_type_1E,_118300_(3)_AD|Dejerine-Sottas_disease,_145900_(3)_AD,AR|Neuropathy,_recurrent,_with_pressure_palsies,_162500_(3)_AD|Roussy-Levy_syndrome,_180800_(3)_AD,.,Spermatogenic_failure_81,_620277_(3)_AR,.,.,.,.;P_loss_source=HI3:PMP22|dbVar:nssv15119700|nssv15120161|dbVar:nssv15123358|dbVar:nssv15124100|dbVar:nssv15124536|dbVar:nssv15130148|nssv15131578|dbVar:nssv15131641|dbVar:nssv15132056|dbVar:nssv15133540|dbVar:nssv15152434|dbVar:nssv15605873|dbVar:nssv15770639|dbVar:nssv16212046|dbVar:nssv16213644|dbVar:nssv17171685|dbVar:nssv17171686|dbVar:nssv17171687|dbVar:nssv17517519|dbVar:nssv17968760|dbVar:nssv17971249|dbVar:nssv17971279|dbVar:nssv17972656|dbVar:nssv17974454|dbVar:nssv17974892|dbVar:nssv18788962|morbid:PMP22|morbid:TEKT3,dbVar:nssv15124536,.,.,.,.,.,.,HI3:PMP22|dbVar:nssv15119700|nssv15120161|dbVar:nssv15131641|dbVar:nssv15133540|dbVar:nssv15770639|dbVar:nssv16212046|dbVar:nssv17171685|dbVar:nssv17171686|dbVar:nssv17171687|dbVar:nssv17517519|dbVar:nssv17968760|dbVar:nssv17971279|dbVar:nssv17974892|dbVar:nssv18788962|morbid:PMP22,.,morbid:TEKT3,.,.,.,.;P_loss_coord=17:14110044-14111913|17:14111773-15442066|17:14128551-15422557|17:14139890-15142928|17:14215740-15422582|17:14763747-15242181|17:15133085-15134407|17:15133085-15142938|17:15133085-15164054|17:15133095-15164078|17:15133097-15168643|17:15133098-15164054|17:15133961-15169915|17:15134215-15164064|17:15134234-15164044|17:15134235-15164044|17:15138536-15168643|17:15142769-15142948|17:15142779-15142938|17:15142779-15164054|17:15142930-15164044|17:15152792-15162532|17:15162392-15164044|17:15162402-15162520|17:15162402-15162523|17:15162402-15164054|17:15207129-15244914,17:14110044-14111913,.,.,.,.,.,.,17:15133097-15168643|17:15133098-15164054|17:15134215-15164064|17:15134234-15164044|17:15134235-15164044|17:15138536-15168643|17:15142769-15142948|17:15142779-15142938|17:15142779-15164054|17:15142930-15164044|17:15152792-15162532|17:15162392-15164044|17:15162402-15162520|17:15162402-15162523|17:15162402-15164054,.,17:15207129-15244914,.,.,.,.;po_P_gain_phen=17p12_recurrent_(HNPP/CMT1A)_region_(includes_PMP22);po_P_gain_source=dbVar:nssv15148946|dbVar:nssv15150353|dbVar:nssv15149908|nssv15152170|dbVar:nssv15159024|dbVar:nssv15160732|dbVar:nssv15159027|dbVar:nssv15121114|dbVar:nssv17976715|dbVar:nssv15133502|dbVar:nssv15605908|dbVar:nssv17955950|dbVar:nssv18330199|dbVar:nssv15127850|dbVar:nssv15155527|dbVar:nssv18330563|dbVar:nssv16215327|dbVar:nssv15152221|dbVar:nssv15155528|dbVar:nssv15152212|dbVar:nssv15151828|dbVar:nssv15138362|dbVar:nssv18330766|dbVar:nssv15152433|dbVar:nssv15141972|dbVar:nssv15137438|dbVar:nssv15138198|dbVar:nssv15151261|dbVar:nssv15152245|dbVar:nssv15139258|nssv15130449|dbVar:nssv18329572|dbVar:nssv18330190|dbVar:nssv18330250|dbVar:nssv18329615|dbVar:nssv15133504|dbVar:nssv15138548|dbVar:nssv15133503|dbVar:nssv17976450|dbVar:nssv18842067|dbVar:nssv18792739|dbVar:nssv18792799|dbVar:nssv17955866|TS3:ISCA-37436|dbVar:nssv17649964|dbVar:nssv15123339|dbVar:nssv15141042|dbVar:nssv15122626|dbVar:nssv16867389|dbVar:nssv15140957|dbVar:nssv15141757|dbVar:nssv15123522|dbVar:nssv15159072|dbVar:nssv15605912|dbVar:nssv15137903|dbVar:nssv15123444|dbVar:nssv16207305|dbVar:nssv15136705|dbVar:nssv15134920|dbVar:nssv15132415|dbVar:nssv15133505;po_P_gain_coord=17:526-14667519|17:526-15027737|17:527-81041938|17:7215-81058310|17:8548-81060040|17:12345-81057996|17:10795577-17867596|17:11819315-17795978|17:14029614-15562901|17:14063252-15449627|17:14073285-15442296|17:14073564-15479923|17:14073604-15482773|17:14076431-15491532|17:14078284-15479940|17:14079631-15370444|17:14083055-15463054|17:14083055-15479940|17:14083055-15491532|17:14083055-15491533|17:14083055-15567669|17:14083056-15483608|17:14085653-15512120|17:14087934-15437330|17:14087934-15484358|17:14087934-15484858|17:14087934-15490100|17:14087934-15491532|17:14087934-15500645|17:14087935-15479940|17:14087935-15483608|17:14087935-15484358|17:14087935-15484630|17:14090301-15467184|17:14090301-15473590|17:14090301-15482240|17:14093319-15476314|17:14095257-15492591|17:14095307-15466762|17:14095307-15472344|17:14096090-15492591|17:14097916-15422952|17:14098197-15442500|17:14098278-15471179|17:14098661-15501133|17:14099743-15471179|17:14100119-15455297|17:14100119-15458649|17:14100119-15492400|17:14100119-15492444|17:14101030-15504740|17:14105875-15611546|17:14111773-15482872|17:14139858-15707850|17:14195643-15545880|17:15093601-15856310|17:15113718-18184130|17:15138003-20524013|17:15162482-20828612;po_P_gain_percent=3.87|6.17|1.66|1.66|1.66|1.66|18.98|22.45|87.52|96.80|98.02|95.42|95.23|94.83|95.74|98.41|97.24|96.07|95.28|95.28|90.39|95.82|94.07|99.10|96.10|96.06|95.71|95.61|94.99|96.40|96.15|96.10|96.08|97.46|97.01|96.41|97.03|96.04|97.85|97.45|96.09|99.83|99.82|97.75|95.68|97.85|99.02|98.78|96.38|96.38|95.54|88.74|97.02|83.05|92.31|45.69|10.69|5.65|4.93;po_P_loss_phen=17p12_recurrent_(HNPP/CMT1A)_region_(includes_PMP22)|Mitochondrial_complex_IV_deficiency,_nuclear_type_3,_619046_(3)_AR;po_P_loss_source=morbid:COX10|dbVar:nssv15129689|dbVar:nssv17976967|dbVar:nssv18330114|dbVar:nssv15145216|dbVar:nssv18330761|dbVar:nssv15138335|dbVar:nssv18330252|dbVar:nssv15145035|dbVar:nssv15141682|dbVar:nssv15141099|dbVar:nssv15138794|dbVar:nssv18330872|dbVar:nssv15137498|nssv15155529|dbVar:nssv15137504|dbVar:nssv18330269|dbVar:nssv18842062|dbVar:nssv15141647|HI3:ISCA-37436|dbVar:nssv18330706|dbVar:nssv15150275|dbVar:nssv15129116|dbVar:nssv15123772|dbVar:nssv15141918|dbVar:nssv15159071|nssv15605909|dbVar:nssv15123331|dbVar:nssv15605911|dbVar:nssv18786371|dbVar:nssv15605913|dbVar:nssv16255829|dbVar:nssv15136096|dbVar:nssv15136245|dbVar:nssv15126994|dbVar:nssv15134560|dbVar:nssv15137984;po_P_loss_coord=17:13972821-14111994|17:14073604-15482773|17:14076990-15473312|17:14077820-15491532|17:14082226-15421861|17:14082946-15484858|17:14083055-15475087|17:14083056-15484859|17:14086859-15476561|17:14087788-15473312|17:14087788-15483608|17:14087788-15490100|17:14087789-15484858|17:14087934-15484858|17:14087934-15491532|17:14087935-15491532|17:14095257-15477547|17:14095640-15274712|17:14097916-15422952|17:14098248-15475654|17:14098661-15500645|17:14098787-15495266|17:14099743-15471179|17:14100119-15455238|17:14101030-15449627|17:14101030-15482817|17:14104013-15551814|17:14110128-15472344|17:14110452-15449097|17:14111755-15442178|17:14111773-15482872|17:14111773-15491748|17:14112032-15482773|17:14574436-15856310|17:14970117-17375771;po_P_loss_percent=8.53|95.23|96.11|94.92|98.66|95.72|96.40|95.73|96.56|96.85|96.14|95.70|96.05|96.06|95.61|95.61|97.08|99.62|99.83|97.43|95.72|96.10|97.85|99.03|99.44|97.05|92.42|97.78|99.47|99.99|97.02|96.40|97.03|67.68|19.62;P_snvindel_nb=60,1,.,.,.,.,.,.,59,.,.,.,.,.,.;P_snvindel_phen=Autosomal_recessive_Dejerine-Sottas_syndrome|Charcot-Marie-Tooth_disease|Charcot-Marie-Tooth_disease,_type_I|Charcot-Marie-Tooth_disease,_type_IA|Charcot-Marie-Tooth_disease_type_1E|Charcot-Marie-Tooth_disease_type_2E|DEJERINE-SOTTAS_SYNDROME,_AUTOSOMAL_DOMINANT|Dejerine-Sottas_disease|Guillain-Barre_syndrome,_familial|Hereditary_liability_to_pressure_palsies|Inborn_genetic_diseases|Mitochondrial_complex_4_deficiency,_nuclear_type_3|Mitochondrial_complex_IV_deficiency,_nuclear_type_1|Roussy-Lévy_syndrome,Mitochondrial_complex_4_deficiency,_nuclear_type_3|Mitochondrial_complex_IV_deficiency,_nuclear_type_1,.,.,.,.,.,.,Autosomal_recessive_Dejerine-Sottas_syndrome|Charcot-Marie-Tooth_disease|Charcot-Marie-Tooth_disease,_type_I|Charcot-Marie-Tooth_disease,_type_IA|Charcot-Marie-Tooth_disease_type_1E|Charcot-Marie-Tooth_disease_type_2E|DEJERINE-SOTTAS_SYNDROME,_AUTOSOMAL_DOMINANT|Dejerine-Sottas_disease|Guillain-Barre_syndrome,_familial|Hereditary_liability_to_pressure_palsies|Inborn_genetic_diseases|Roussy-Lévy_syndrome,.,.,.,.,.,.;B_gain_source=.,.,.,.,.,1000g|esv3640046,1000g|esv3640046,1000g|esv3640046,.,.,.,.,.,.,.;B_gain_coord=.,.,.,.,.,17:14668590-15084842|17:14668590-15084842,17:14668590-15084842|17:14668590-15084842,17:14668590-15084842|17:14668590-15084842,.,.,.,.,.,.,.;B_gain_AFmax=.,.,.,.,.,0.272,0.272,0.272,.,.,.,.,.,.,.;B_loss_source=dbVar;B_loss_coord=chr17:14093499-15486000,chr17:14093499-15486000,chr17:14093499-15486000|chr17:14126839-14220873,chr17:14093499-15486000,chr17:14093499-15486000|chr17:14126839-14220873,chr17:14093499-15486000|chr17:14668589-15084842|chr17:14920183-14938805|chr17:14931264-14977742,chr17:14093499-15486000|chr17:14668589-15084842|chr17:14931264-14977742,chr17:14093499-15486000|chr17:14668589-15084842|chr17:14995672-15057656|chr17:14995771-15057475,chr17:14093499-15486000,chr17:14093499-15486000|chr17:15070858-15163533|chr17:15112458-15159531|chr17:15150741-15155583,chr17:14093499-15486000,chr17:14093499-15486000|chr17:15287341-15482010,chr17:14093499-15486000|chr17:15287341-15482010,chr17:14093499-15486000|chr17:15287341-15482010,chr17:14093499-15486000|chr17:15287341-15482010;B_loss_AFmax=0.01;po_B_gain_someG_source=17:14191081-14198547_DDD:48802|17:14224375-14483419_esv3640026|17:14668590-15084842_esv3640046;po_B_gain_someG_coord=17:14191081-14191901_DDD:48801|17:14224375-14483419_1000g|17:14668590-15084842_1000g;po_B_loss_someG_source=chr17:14096682-14108514_dbVar|chr17:14126839-14220873_dbVar|chr17:14155625-14155942_dbVar|chr17:14189910-14191555_dbVar|17:14189911-14191555_DDD:48799|17:14189911-14191555_esv2665541|17:14189911-14191557_1000g|17:14189912-14191555_IMH|17:14191081-14191901_DDD:48801|chr17:14220258-14221199_dbVar|17:14240918-14242023_DDD:48803|17:14240923-14242032_1000g|17:14240941-14242023_IMH|chr17:14241867-14248195_dbVar|chr17:14269249-14271950_dbVar|chr17:14277792-14278679_dbVar|chr17:14300414-14308117_dbVar|chr17:14314642-14320048_dbVar|chr17:14315900-14328444_dbVar|17:14332272-14332576_gnomAD-SV_v2.1_DEL_17_158748...;po_B_loss_someG_coord=chr17:14093499-15486000_dbVar|chr17:14105499-14108091_dbVar|chr17:14132469-14133456_dbVar|chr17:14186324-14196555_dbVar|chr17:14189910-14191557_dbVar|chr17:14189911-14191555_dbVar|17:14189911-14191555_gnomAD-SV_v2.1_DEL_17_158736|17:14189911-14191557_esv3640023|17:14190834-14191460_nsv574421|chr17:14210420-14210623_dbVar|chr17:14224374-14483419_dbVar|chr17:14240922-14242032_dbVar|17:14240923-14242032_esv3640027|chr17:14240941-14242023_dbVar|chr17:14256280-14258428_dbVar|chr17:14272755-14288592_dbVar|chr17:14284612-14628667_dbVar|chr17:14300914-14367997_dbVar|chr17:14314678-14320063_dbVar|chr17:14332272-14332576_dbVar...;GC_content_left=0.505;GC_content_right=0.42;SegDup_right=17:15422954-15470900;HI=3,30,.,.,.,.,.,.,3,.,.,.,.,.,.;TS=.,.,.,.,.,.,.,.,0,.,.,.,.,.,.;DDD_HI_percent=96.58,60.22,96.58,42.95,.,.,.,.,40.48,.,59.06,86.77,52.33,.,49.2;ExAC_delZ=-2.62354415217069,-2.62354415217069,-2.62354415217069,-2.62354415217069,.,.,.,.,-2.62354415217069,.,-2.62354415217069,-2.62354415217069,-2.62354415217069,.,-2.62354415217069;ExAC_dupZ=-0.276965016632095,-2.20885612270982,-2.20416703243077,-0.276965016632095,.,.,.,.,-1.55852578268999,.,-1.25885348060374,-2.24141606178004,-2.53125239294469,.,-2.53125239294469;ExAC_cnvZ=-1.64032033771268,-2.47162789907313,-2.47162789907313,-1.64032033771268,.,.,.,.,-2.47162789907313,.,-2.47162789907313,-2.47162789907313,-2.47162789907313,.,-2.47162789907313;ExAC_synZ=3.6772325764896,0.16322796385632,1.67462394349301,3.6772325764896,.,.,.,.,-0.424806725478425,.,0.241972873531725,-0.193191475026352,0.433099426603836,.,0.622094281610252;ExAC_misZ=4.17517843763452,0.511864222455301,1.73432863871862,4.17517843763452,.,.,.,.,1.07197498670855,.,-0.405588628410555,0.152950560142403,0.962176598220999,.,0.322678575541803;GenCC_disease=.,Leigh_syndrome|cytochrome-c_oxidase_deficiency_disease|mitochondrial_complex_4_deficiency,_nuclear_type_3|mitochondrial_disease,.,.,.,.,.,.,Charcot-Marie-Tooth_disease_type_1A|Charcot-Marie-Tooth_disease_type_1E|Charcot-Marie-Tooth_disease_type_3|hereditary_neuropathy_with_liability_to_pressure_palsies,.,spermatogenic_failure_81,.,.,.,.;GenCC_moi=.,AR,.,.,.,.,.,.,AD,.,.,.,.,.,.;GenCC_classification=.,Definitive|Moderate|Strong|Supportive,.,.,.,.,.,.,Definitive|Moderate|Strong|Supportive,.,Limited,.,.,.,.;GenCC_pmid=.,10767350|10767350[PMID]_12928484[PMID]_15455402[PMID]|12928484|15455402|16103131|22622581|24100867,.,.,.,.,.,.,10330345|118220|12578939|162500|18698610[PMID]_12090401[PMID]|20301384[PMID]|23224996|24175617|601097|7931393|8355122|9143558|NULL,.,18951373|36708031,.,.,.,.;NCBI_gene_ID=.,1352,146822,9953,.,94150,.,94151,5376,100616125,64518,284040,100533496,94145,201158;HGNC_gene_ID=.,HGNC:2260,HGNC:14395,HGNC:5198,.,HGNC:14386,.,HGNC:14387,HGNC:9118,HGNC:41597,HGNC:14293,HGNC:14383,HGNC:42961,HGNC:14382,HGNC:30453;OMIM_ID=602125|601097|612683,602125,.,.,.,.,.,.,601097,.,612683,.,.,.,.;OMIM_phenotype=.,Mitochondrial_complex_IV_deficiency,_nuclear_type_3,_619046_(3)_AR,.,.,.,.,.,.,?Neuropathy,_inflammatory_demyelinating,_139393_(3)_?AD|Charcot-Marie-Tooth_disease,_type_1A,_118220_(3)_AD|Charcot-Marie-Tooth_disease,_type_1E,_118300_(3)_AD|Dejerine-Sottas_disease,_145900_(3)_AD,AR|Neuropathy,_recurrent,_with_pressure_palsies,_162500_(3)_AD|Roussy-Levy_syndrome,_180800_(3)_AD,.,Spermatogenic_failure_81,_620277_(3)_AR,.,.,.,.;OMIM_inheritance=.,AR,.,.,.,.,.,.,?AD|AD|AD,AR,.,AR,.,.,.,.;OMIM_morbid=yes,yes,.,.,.,.,.,.,yes,.,yes,.,.,.,.;OMIM_morbid_candidate=yes,.,.,.,.,.,.,.,yes,.,.,.,.,.,.;LOEUF_bin=1,3,9,4,.,.,.,.,1,.,7,9,7,.,7;GnomAD_pLI=0.90958,0.08405,1.282e-06,0.29349,.,.,.,.,0.90958,.,1.9845e-17,0.095789,8.7378e-07,.,2.3189e-05;ExAC_pLI=0.83315,0.64657,0.0075064,0.085455,.,.,.,.,0.83315,.,3.1995e-14,0.24429,0.0023623,.,0.00013674;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_gain_source,_+1.00)|2H-2_(PMP22/TEKT3,_+0.00)|2J_(COX10,_+0.00)|2L_(TVP23C/TVP23C-CDRT4,_+0.00)|3A_(14_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=15442066;SVLEN=1341948	GT	1/.
17	34437476	.	T	<DUP>	.	PASS	AnnotSV_ID=17_34437476_34817481_DUP_1;SV_start=34437476;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split;CytoBand=q12;Gene_name=TBC1D3B|CCL3L3|CCL4L2|TBC1D3D|CCL3L1|TBC1D3H|TBC1D3F,TBC1D3B,CCL3L3,CCL4L2,TBC1D3D,CCL3L1,TBC1D3H,TBC1D3F;Closest_left=CCL4;Closest_right=ZNHIT3;Gene_count=7;Tx=.,NM_001001417,NM_001001437,NM_001291471,NM_001291465,NM_021006,NM_001123392,NM_032258;Tx_version=.,7,4,2,2,6,4,5;Tx_start=.,34493062,34522267,34538464,34581084,34623841,34746118,34797171;Tx_end=.,34503996,34524157,34540275,34592039,34625731,34757005,34808058;Overlapped_tx_length=.,10934,1890,1811,10955,1890,10887,10887;Overlapped_CDS_length=.,1650,282,312,1650,282,1650,1650;Overlapped_CDS_percent=.,100,100,100,100,100,100,100;Frameshift=.,no,no,no,no,no,no,no;Exon_count=.,14,3,3,14,3,14,14;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR;Intersect_start=.,34493062,34522267,34538464,34581084,34623841,34746118,34797171;Intersect_end=.,34503996,34524157,34540275,34592039,34625731,34757005,34808058;RE_gene=PEX12_(morbid/RE=GH_enhancer)|PIGW_(morbid/RE=EA_enhancer)|ZNHIT3_(morbid/RE=ABC_enhancer+GH_enhancer);po_P_gain_phen=17q12_recurrent_(RCAD_syndrome)_region_(includes_HNF1B);po_P_gain_source=dbVar:nssv15149908|nssv15152170|dbVar:nssv15159024|dbVar:nssv15160732|dbVar:nssv15159027|dbVar:nssv15127236|dbVar:nssv15775117|dbVar:nssv15132421|dbVar:nssv15132422|dbVar:nssv15155541|dbVar:nssv18330713|dbVar:nssv15155542|dbVar:nssv15605916|dbVar:nssv16736632|dbVar:nssv15138685|dbVar:nssv15142873|dbVar:nssv15141421|dbVar:nssv15132229|nssv15139703|dbVar:nssv15125411|dbVar:nssv15125622|dbVar:nssv15130152|nssv15132345|nssv15139691|dbVar:nssv15135915|dbVar:nssv15124805|dbVar:nssv18842005|TS3:ISCA-37432|dbVar:nssv15132164|dbVar:nssv17649867|dbVar:nssv16215252|dbVar:nssv15123756|dbVar:nssv15133519|dbVar:nssv16736603|dbVar:nssv15135870;po_P_gain_coord=17:527-81041938|17:7215-81058310|17:8548-81060040|17:12345-81057996|17:16757564-81048189|17:21690654-38772647|17:34310999-36297053|17:34360169-36209228|17:34425363-36283612|17:34425364-36404555|17:34426245-36225988|17:34437476-36214026|17:34437476-36243028|17:34437483-36244358|17:34437483-36350584|17:34437483-36404555|17:34508118-36248918|17:34526602-36188734|17:34604365-36231917|17:34611353-36248918|17:34611353-36263019|17:34750819-36354738|17:34752222-36105007|17:34815073-36192489|17:34815185-36209228|17:34815467-36249366|17:34815552-36244358|17:34815552-36249800|17:34817423-36173763|17:34817423-36243028|17:34817423-36248918;po_P_gain_percent=0.47|0.47|0.47|0.47|0.59|2.22|19.13|20.55|20.45|19.20|21.11|21.39|21.05|21.03|19.86|19.32|17.77|17.50|13.09|12.59|12.48|4.16|4.82|0.17|0.16|0.14|0.14|0.13|0.00|0.00|0.00;po_P_loss_phen=17q12_recurrent_(RCAD_syndrome)_region_(includes_HNF1B);po_P_loss_source=dbVar:nssv18830976|dbVar:nssv15137372|dbVar:nssv8639331|dbVar:nssv15142228|dbVar:nssv15133035|dbVar:nssv17976904|dbVar:nssv15142015|dbVar:nssv15153182|dbVar:nssv15153183|dbVar:nssv15133261|dbVar:nssv15124226|dbVar:nssv15132100|nssv15139544|dbVar:nssv15127168|dbVar:nssv15133024|dbVar:nssv17955818|HI3:ISCA-37432|dbVar:nssv15149164|dbVar:nssv15129143|dbVar:nssv15130784|nssv15172799|dbVar:nssv15173493|dbVar:nssv15131818|dbVar:nssv15135737|dbVar:nssv15135591|dbVar:nssv15134619;po_P_loss_coord=17:30572863-35843988|17:34360169-36248859|17:34360228-36473024|17:34447114-36283612|17:34450406-36248918|17:34463924-36410559|17:34475680-36283612|17:34475680-36311009|17:34477386-36404555|17:34508118-36173763|17:34604365-36188734|17:34611353-36248918|17:34750819-81048189|17:34768967-36263019|17:34807070-36284994|17:34815073-36192489|17:34815073-36192492|17:34815552-36208392|17:34815552-36244358|17:34815552-36307189|17:34817423-36168104|17:34817423-36188700|17:34817423-36248918|17:34817423-36263019;po_P_loss_percent=7.21|20.12|17.99|20.17|20.41|18.16|18.91|18.62|17.65|18.57|13.45|12.59|0.14|3.25|0.70|0.17|0.17|0.14|0.14|0.13|0.00|0.00|0.00|0.00;B_gain_source=dgv122e55,DDD:49237|DDD:49240|DDD:49243|dgv122e55|dgv3144n100|esv2760467|esv2762388,DDD:49237|DDD:49240|DDD:49243|DDD:49256|TS40:ISCA-46706|dgv122e55|dgv3144n100|esv2760467|esv2762388|nsv514837,DDD:49237|DDD:49240|DDD:49256|dgv122e55|dgv3144n100|esv2760467|esv2762388,DDD:49237|DDD:49240|dgv122e55|dgv3144n100|esv2760467|esv2762388,DDD:49240|dgv122e55|dgv3144n100|esv2760467|esv2762388|nsv514839,DDD:49240|dgv122e55,dgv122e55;B_gain_coord=17:34426246-34870708,17:34387632-34629696|17:34416538-34629684|17:34426246-34870708|17:34435513-34629696|17:34435674-34621060|17:34436438-34780239|17:34443777-34537005,17:34387632-34629696|17:34416538-34629684|17:34426246-34870708|17:34435513-34629696|17:34435674-34621060|17:34436438-34780239|17:34443777-34537005|17:34502930-34524195|17:34502941-34524192|17:34517741-34540630,17:34387632-34629696|17:34416538-34629684|17:34426246-34870708|17:34435513-34629696|17:34435674-34621060|17:34436438-34780239|17:34517741-34540630,17:34387632-34629696|17:34416538-34629684|17:34426246-34870708|17:34435513-34629696|17:34435674-34621060|17:34436438-34780239,17:34387632-34629696|17:34416538-34629684|17:34426246-34870708|17:34435513-34629696|17:34436438-34780239|17:34610042-34641487,17:34426246-34870708|17:34436438-34780239,17:34426246-34870708;B_gain_AFmax=0.03,0.1041,0.1041,0.0994,0.0994,0.0994,0.0994,0.03;B_loss_source=.,DDD:49240|DDD:49243,DDD:49240|DDD:49243|DDD:49256|HI40:ISCA-46698|dgv545e199,DDD:49240|DDD:49256|HI40:ISCA-46698|dgv545e199,DDD:49240,DDD:49240|dgv546e199,DDD:49240,.;B_loss_coord=.,17:34436438-34780239|17:34443777-34537005,17:34436438-34780239|17:34443777-34537005|17:34508446-34554792|17:34509780-34551554|17:34517741-34540630,17:34436438-34780239|17:34508446-34554792|17:34509780-34551554|17:34517741-34540630,17:34436438-34780239,17:34436438-34780239|17:34591446-34670592,17:34436438-34780239,.;B_loss_AFmax=.,0.0982,0.15,0.15,0.0982,0.1,0.0982,.;B_inv_source=IMH;B_inv_coord=17:30436599-65922464|17:32367054-60556542|17:32367223-60556516|17:32367435-60556508;B_inv_AFmax=0.2252;po_B_gain_someG_source=17:34416412-34496071_nsv514836|17:34424712-34477480_dgv908e212|17:34426246-34870708_dgv122e55|17:34435513-34485079_dgv3148n100|17:34435674-34621060_DDD:49237|17:34436100-34482872_1000g|17:34436438-34780239_DDD:49240|17:34437483-34477480_dgv910e212|17:34502930-34524195_nsv514837|17:34517741-34540630_DDD:49256|17:34580927-34587273_DDD:49263|17:34625755-34641426_DDD:49271|17:34750173-34796456_DDD:49284|;po_B_gain_someG_coord=17:34387632-34629696_esv2762388|17:34416538-34629684_dgv3144n100|17:34425364-34477387_dgv121e55|17:34431132-34484342_DDD:49235|17:34435513-34629696_esv2760467|17:34436100-34482872_1000g|17:34436100-34482872_dgv572e214|17:34437129-34485091_esv2421587|17:34443777-34537005_DDD:49243|17:34502941-34524192_TS40:ISCA-46706|17:34538648-34540293_nsv514838|17:34610042-34641487_nsv514839|17:34746065-34746521_DDD:49283|17:34800000-34914000_gnomAD-SV_v2.1_DUP_17_43954;po_B_loss_someG_source=17:34438323-34449809_DDD:49242|chr17:34445826-34446140_dbVar|17:34508446-34554792_dgv545e199|17:34517741-34540630_DDD:49256|chr17:34540766-34540825_dbVar|17:34580927-34587273_DDD:49263|17:34625755-34641426_DDD:49271|chr17:34642332-34642392_dbVar|17:34702019-34702094_DDD:49280|17:34762644-34775639_DDD:49288|chr17:34812000-36251000_dbVar;po_B_loss_someG_coord=17:34436438-34780239_DDD:49240|17:34443777-34537005_DDD:49243|17:34446621-34447535_DDD:49246|17:34509780-34551554_HI40:ISCA-46698|chr17:34528205-34528314_dbVar|17:34540766-34540825_gnomAD-SV_v2.1_DEL_17_159956|17:34591446-34670592_dgv546e199|chr17:34629804-34629885_dbVar|17:34642332-34642392_gnomAD-SV_v2.1_DEL_17_159958|17:34750173-34796456_DDD:49284|chr17:34808750-34815000_dbVar;GC_content_left=0.435;GC_content_right=0.515;Repeat_coord_left=17:34437545-34437861;Repeat_type_left=7SLRNA;SegDup_left=17:34405992-34437446|17:34405992-34437446;DDD_HI_percent=94.43,94.43,88.85,84.65,.,88.49,93.12,93.73;ExAC_synZ=2.42746656950142,2.42746656950142,.,1.02068766819866,.,.,.,1.8673923772413;ExAC_misZ=2.41694262394586,2.41694262394586,.,1.31010018701924,.,.,.,2.14567117504116;NCBI_gene_ID=.,414059,414062,9560,101060389,6349,729877,84218;HGNC_gene_ID=.,HGNC:27011,HGNC:30554,HGNC:24066,HGNC:28944,HGNC:10628,HGNC:30708,HGNC:18257;OMIM_morbid_candidate=yes,.,.,.,.,yes,.,.;LOEUF_bin=7,7,9,9,.,9,.,9;GnomAD_pLI=0.31517,0.21949,0.31517,0.088586,.,0.12057,.,1.3666e-05;ExAC_pLI=0.63692,0.63692,.,0.48994,.,.,.,0.62038;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|3A_(7_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1;END=34817481;SVLEN=380006	GT	1/.
17	44171889	.	C	<DUP>	.	PASS	AnnotSV_ID=17_44171889_44297143_DUP_1;SV_start=44171889;Biologist_ranking=Benign;Annotation_mode=full,split,split;CytoBand=q21.31;Gene_name=KANSL1|KANSL1-AS1,KANSL1,KANSL1-AS1;Closest_left=STH;Closest_right=ARL17B;Gene_count=2;Tx=.,NM_001405854,NR_034172;Tx_version=.,1,1;Tx_start=.,44107281,44270938;Tx_end=.,44302125,44274089;Overlapped_tx_length=.,125255,3151;Overlapped_CDS_length=.,1431,0;Overlapped_CDS_percent=.,43,0;Frameshift=.,no,.;Exon_count=.,16,2;Location=.,intron2-intron4,txStart-txEnd;Location2=.,5'UTR-CDS,UTR;Dist_nearest_SS=.,37,.;Nearest_SS_type=.,5',.;Intersect_start=.,44171888,44270938;Intersect_end=.,44297143,44274089;RE_gene=GOSR2_(morbid/RE=ABC_enhancer+GH_enhancer)|MAPT_(morbid/RE=ABC_enhancer)|NSF_(morbid/RE=EA_enhancer)|PLEKHM1_(morbid/RE=ABC_enhancer);po_P_gain_source=dbVar:nssv15149908|nssv15152170|dbVar:nssv15159024|dbVar:nssv15160732|dbVar:nssv15159027|dbVar:nssv15127236|dbVar:nssv15149626|dbVar:nssv15150382|dbVar:nssv16207328|dbVar:nssv15141990;po_P_gain_coord=17:527-81041938|17:7215-81058310|17:8548-81060040|17:12345-81057996|17:16757564-81048189|17:42580685-81085615|17:43655357-44292742|17:43655357-44784639|17:43710151-44292742;po_P_gain_percent=0.15|0.15|0.15|0.15|0.19|0.33|18.96|11.09|20.74;po_P_loss_phen=Koolen-De_Vries_syndrome,_610443_(3)_AD;po_P_loss_source=dbVar:nssv15127168|dbVar:nssv16215146|dbVar:nssv15141350|dbVar:nssv16254531|dbVar:nssv15124147|dbVar:nssv15135761|dbVar:nssv15137490|dbVar:nssv18330259|dbVar:nssv15129570|dbVar:nssv15138300|dbVar:nssv15137112|dbVar:nssv15132122|dbVar:nssv15132318|nssv15133093|dbVar:nssv15135170|dbVar:nssv15132284|nssv15139974|dbVar:nssv15136771|dbVar:nssv15136778|dbVar:nssv15132380|dbVar:nssv15173411|dbVar:nssv18329240|dbVar:nssv15133422|dbVar:nssv15143597|nssv15155552|dbVar:nssv15138826|dbVar:nssv15142266|nssv17976955|nssv18326376|dbVar:nssv15173506|dbVar:nssv15136011|dbVar:nssv15133428|dbVar:nssv15132370|nssv15140010|dbVar:nssv15132745|dbVar:nssv16091744|dbVar:nssv15135222|dbVar:nssv15161495|dbVar:nssv15129007|dbVar:nssv15152077|dbVar:nssv15132384|dbVar:nssv15136234|dbVar:nssv15132385|dbVar:nssv15133429|morbid:KANSL1|HI3:KANSL1|dbVar:nssv16252231;po_P_loss_coord=17:34750819-81048189|17:43559852-44248220|17:43585761-44248995|17:43586397-44212416|17:43592411-44249054|17:43593477-44224221|17:43622198-44201470|17:43622198-44212416|17:43629216-44399455|17:43648492-44214888|17:43651732-44351152|17:43653228-44351644|17:43655748-44176717|17:43655748-44224221|17:43655748-44351152|17:43656694-44176717|17:43656694-44694311|17:43675409-44351152|17:43685926-44212727|17:43693539-44212416|17:43693608-44176717|17:43703801-44212416|17:43703802-44187492|17:43703802-44212416|17:43705602-44208333|17:43706887-44171947|17:43706887-44176171|17:43706887-44176717|17:43706887-44207977|17:43706887-44210822|17:43706887-44351152|17:43706887-44694283|17:43706896-44762543|17:43710371-44212416|17:43715081-44176717|17:43717704-44345038|17:43717704-44351152|17:43751675-44351152|17:44107282-44302733|17:44107283-44302733|17:44174220-44481307;po_P_loss_percent=0.27|11.09|11.63|6.47|11.75|8.30|5.11|6.87|16.26|7.59|17.91|17.93|0.93|9.21|18.01|0.93|12.07|18.54|7.75|7.81|1.00|7.97|3.23|7.97|7.25|0.01|0.91|1.03|7.20|7.73|19.44|12.69|11.87|8.07|1.05|19.97|19.77|20.89|64.08|64.09|40.03;P_snvindel_nb=26,26,.;P_snvindel_phen=Inborn_genetic_diseases|Intellectual_disability|Koolen-de_Vries_syndrome|Neurodevelopmental_delay|not_specified,Inborn_genetic_diseases|Intellectual_disability|Koolen-de_Vries_syndrome|Neurodevelopmental_delay|not_specified,.;B_gain_source=DDD:49604|IMH|dgv127e55|dgv128e55|dgv3181n100|esv2422002|esv2762433|nsv516807,DDD:49604|IMH|dgv127e55|dgv128e55|dgv3181n100|esv2422002|esv2762433|nsv516807,DDD:49604|DDD:49608|DDD:49609|DDD:49611|DDD:49618|IMH|dgv127e55|dgv128e55|dgv130e55|dgv3181n100|dgv367n27|dgv938e212|dgv939e212|dgv943e212|esv2422002|esv2760451|esv2762433|gnomAD-SV_v2.1_DUP_17_44188|nsv514850|nsv516807;B_gain_coord=17:43574135-44788194|17:43655786-44366714|17:44004973-44811116|17:44094472-44364056|17:44109475-44793283|17:44145590-44364158|17:44165804-44362009|17:44170038-44744285,17:43574135-44788194|17:43655786-44366714|17:44004973-44811116|17:44094472-44364056|17:44109475-44793283|17:44145590-44364158|17:44165804-44362009|17:44170038-44744285,17:43574135-44788194|17:43655786-44366714|17:44004973-44811116|17:44094472-44364056|17:44109475-44793283|17:44145590-44364158|17:44163926-44293020|17:44165703-44291551|17:44165804-44362009|17:44170038-44744285|17:44175518-44443972|17:44176859-44397890|17:44187493-44292742|17:44187493-44364056|17:44187493-44789621|17:44194107-44762405|17:44208145-44764994|17:44212647-44369642|17:44212745-44369562|17:44212825-44276618|17:44249111-44320939;B_gain_AFmax=0.17,0.17,0.5406;B_loss_source=esv2762433,esv2762433,DDD:49609|DDD:49611|dgv940e212|dgv941e212|esv2760451|esv2762433;B_loss_coord=17:43574135-44788194,17:43574135-44788194,17:43574135-44788194|17:44176859-44397890|17:44190672-44785015|17:44194107-44762405|17:44208145-44764994|17:44212311-44292742;B_loss_AFmax=0.07,0.07,0.2994;B_inv_source=IMH;B_inv_coord=17:30436599-65922464|17:32367054-60556542|17:32367223-60556516|17:32367435-60556508|17:43662689-44338152|17:43664434-44336296|17:43681870-44318931,17:30436599-65922464|17:32367054-60556542|17:32367223-60556516|17:32367435-60556508|17:43662689-44338152|17:43664434-44336296|17:43681870-44318931,17:30436599-65922464|17:32367054-60556542|17:32367223-60556516|17:32367435-60556508|17:43662689-44338152|17:43664434-44336296|17:43681870-44318931|17:43702611-44296817;B_inv_AFmax=0.2252;po_B_gain_someG_source=17:43655786-44366714_IMH|17:44094472-44364056_dgv128e55|17:44145590-44364158_dgv3181n100|17:44163926-44293020_dgv367n27|17:44165339-44211686_1000g|17:44165339-44211686_dgv575e214|17:44165804-44362009_esv2422002|17:44170285-44212803_DDD:49606|17:44176395-44176717_1000g|17:44187493-44214094_dgv937e212|17:44187493-44364056_dgv130e55|17:44194107-44762405_DDD:49611|17:44209763-44267388_DDD:49612|17:44212745-44369562_gnomAD-SV_v2.1_DUP_17_44188|17:44223908-44224221_1000g|17:44230894-44262697_1000g|17:44249111-44320939_DDD:49618|17:44282756-44286423_IMH|;po_B_gain_someG_coord=17:43574135-44788194_esv2762433|17:44004973-44811116_dgv127e55|17:44109475-44793283_nsv516807|17:44149791-44248860_DDD:49602|17:44165000-44217000_gnomAD-SV_v2.1_DUP_17_44187|17:44165339-44211686_1000g|17:44165703-44291551_nsv514850|17:44170038-44744285_DDD:49604|17:44175518-44443972_DDD:49608|17:44176859-44397890_DDD:49609|17:44187493-44292742_dgv938e212|17:44187493-44789621_dgv939e212|17:44208145-44764994_esv2760451|17:44212647-44369642_IMH|17:44212825-44276618_dgv943e212|17:44230894-44262697_1000g|17:44230894-44262697_dgv576e214|17:44280980-44369559_DDD:49623|17:44283572-44782177_esv3893020;po_B_loss_someG_source=17:44170285-44212803_DDD:49606|chr17:44176395-44176717_dbVar|chr17:44176407-44176807_dbVar|17:44176859-44397890_DDD:49609|17:44190672-44785015_dgv940e212|chr17:44192997-44193064_dbVar|17:44208145-44764994_esv2760451|chr17:44223760-44224221_dbVar|17:44223908-44224221_1000g|17:44223908-44224221_esv2662030|chr17:44265262-44265312_dbVar|;po_B_loss_someG_coord=17:43574135-44788194_esv2762433|17:44176395-44176717_1000g|17:44176395-44176717_esv2675570|17:44176407-44176807_gnomAD-SV_v2.1_DEL_17_160649|chr17:44179666-44182382_dbVar|chr17:44192422-44192507_dbVar|17:44194107-44762405_DDD:49611|17:44212311-44292742_dgv941e212|17:44223760-44224221_gnomAD-SV_v2.1_DEL_17_160652|chr17:44223908-44224221_dbVar|chr17:44256597-44256681_dbVar|chr17:44278890-44279167_dbVar;GC_content_left=0.38;GC_content_right=0.46;Repeat_coord_right=17:44297188-44297495;Repeat_type_right=AluY;SegDup_left=17:44164882-44183555;SegDup_right=17:44294406-44329730;HI=3,3,.;TS=.,0,.;DDD_HI_percent=16.23,16.23,.;ExAC_synZ=-0.71959827485963,-0.71959827485963,.;ExAC_misZ=0.443929223699058,0.443929223699058,.;GenCC_disease=.,Koolen-de_Vries_syndrome|Koolen-de_Vries_syndrome_due_to_a_point_mutation,.;GenCC_moi=.,AD,.;GenCC_classification=.,Definitive|Strong|Supportive,.;GenCC_pmid=.,22544363|22544363[PMID]_22544367[PMID]_20301783[PMID]|22544367,.;NCBI_gene_ID=.,284058,644246;HGNC_gene_ID=.,HGNC:24565,HGNC:43740;OMIM_ID=612452,612452,.;OMIM_phenotype=.,Koolen-De_Vries_syndrome,_610443_(3)_AD,.;OMIM_inheritance=.,AD,.;OMIM_morbid=yes,yes,.;LOEUF_bin=0,0,.;GnomAD_pLI=0.99972,0.99972,.;ExAC_pLI=0.99973,0.99973,.;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2E_(cf_B_gain_source,_+0.00)|2I-3_(KANSL1,_+0.00)|3A_(2_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1;END=44297143;SVLEN=125255	GT	1/.
22	18894836	.	C	<DEL>	.	PASS	AnnotSV_ID=22_18894836_21464119_DEL_1;SV_start=18894836;Biologist_annotation=Di_George_syndrom;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=q11.21;Gene_name=DGCR6|PRODH|LOC122455341|DGCR5|FAM246C|DGCR2|DGCR11|ESS2|TSSK2|GSC2|LINC01311|SLC25A1|CLTCL1|HIRA|MRPL40|C22orf39|UFD1-AS1|UFD1|CDC45|CLDN5|LINC00895|SEPTIN5|SEPT5-GP1BB|GP1BB|TBX1|GNB1L|RTL10|TXNRD2|COMT|MIR4761|ARVCF|TANGO2|MIR185|DGCR8|MIR3618|MIR1306|TRMT2A|MIR6816|RANBP1|SNORA77B|ZDHHC8|CCDC188|LINC02891|LINC00896|RTN4R|MIR1286|DGCR6L|FAM230A|FAM247B|GGTLC3|TMEM191B|PI4KAP1|RIMBP3|FAM246B|FAM230J|FAM230G|ZNF74|SCARF2|KLHL22|MED15|POM121L4P|TMEM191A|PI4KA|SERPIND1|SNAP29|CRKL|LINC01637|AIFM3|LZTR1|THAP7|THAP7-AS1|TUBA3FP|P2RX6|SLC7A4|MIR649|P2RX6P|LRRC74B|BCRP2,DGCR6,PRODH,LOC122455341,DGCR5,FAM246C,DGCR2,DGCR11,ESS2,TSSK2,GSC2,LINC01311,SLC25A1,CLTCL1,HIRA,MRPL40,C22orf39,UFD1-AS1,UFD1,CDC45,CLDN5,LINC00895,SEPTIN5,SEPT5-GP1BB,GP1BB,TBX1,GNB1L,RTL10,TXNRD2,COMT,MIR4761,ARVCF,TANGO2,MIR185,DGCR8,MIR3618,MIR1306,TRMT2A,MIR6816,RANBP1,SNORA77B,ZDHHC8,CCDC188,LINC02891,LINC00896,RTN4R,MIR1286,DGCR6L,FAM230A,FAM247B,GGTLC3,TMEM191B,PI4KAP1,RIMBP3,FAM246B,FAM230J,FAM230G,ZNF74,SCARF2,KLHL22,MED15,POM121L4P,TMEM191A,PI4KA,SERPIND1,SNAP29,CRKL,LINC01637,AIFM3,LZTR1,THAP7,THAP7-AS1,TUBA3FP,P2RX6,SLC7A4,MIR649,P2RX6P,LRRC74B,BCRP2;Closest_left=FAM230F;Closest_right=LOC102724728;Gene_count=78;Tx=.,NM_005675,NM_016335,NR_173081,NR_110533,NM_001396027,NM_005137,NR_024157,NM_022719,NM_053006,NM_005315,NR_103767,NM_001256534,NM_007098,NM_003325,NM_003776,NM_173793,NR_186687,NM_005659,NM_001178010,NM_001130861,NR_024381,NM_002688,NR_037611,NM_000407,NM_001379200,NM_053004,NM_024627,NM_006440,NM_000754,NR_039918,NM_001670,NM_001322141,NR_029706,NM_022720,NR_037412,NR_031706,NM_001331039,NR_106874,NM_001278639,NR_145765,NM_001185024,NM_001365892,NR_038460,NR_026919,NM_023004,NR_031618,NM_033257,NR_165629,NR_186690,NM_001355479,NM_001242313,NR_003563,NM_015672,NM_001396026,NR_136569,NR_165637,NM_001256524,NM_153334,NM_032775,NM_001003891,NR_024592,NR_026815,NM_058004,NM_000185,NM_004782,NM_005207,NR_110537,NM_144704,NM_006767,NM_030573,NR_027051,NR_003608,NM_001394691,NM_004173,NR_030379,NR_002829,NM_001291006,NR_037566;Tx_version=.,6,6,1,2,1,3,1,3,5,2,1,2,4,4,4,5,1,7,2,1,1,6,1,5,1,3,6,5,4,1,3,2,1,7,1,1,2,1,2,1,2,2,2,1,6,1,4,1,1,1,1,1,2,1,2,1,2,7,4,3,1,1,4,4,4,4,1,3,4,3,1,1,1,3,1,1,2,1;Tx_start=.,18893832,18900293,18926981,18957980,19017036,19023798,19033674,19117791,19118820,19134505,19159218,19163093,19166985,19318220,19420067,19428408,19434956,19437433,19467348,19510546,19553652,19702025,19704742,19711061,19748300,19770745,19833668,19863044,19929294,19951275,19957418,20008632,20020661,20067763,20073268,20073580,20099397,20102208,20103626,20113924,20119326,20135938,20186251,20193854,20228937,20236656,20301760,20326419,20351090,20366210,20377668,20383730,20455681,20483850,20632119,20689194,20748440,20778873,20795805,20861896,21043842,21055401,21061978,21128400,21213294,21271694,21311379,21319459,21336585,21353392,21356210,21362491,21369453,21383006,21388464,21396680,21400234,21457304;Tx_end=.,18899601,18923806,18935206,19018755,19017734,19109925,19035888,19132164,19120135,19137805,19160345,19166018,19279242,19419256,19423598,19435234,19439211,19466716,19508135,19512860,19554362,19710842,19712297,19712294,19754857,19842397,19842397,19929341,19957498,19951357,20004346,20054687,20020743,20099395,20073356,20073665,20104749,20102274,20114878,20114049,20135530,20138578,20192441,20196060,20255841,20236734,20307583,20350461,20362291,20368028,20380440,20398695,20461786,20484549,20656858,20706786,20762745,20792112,20850082,20941906,21046009,21058891,21213099,21142008,21245502,21308035,21318968,21335647,21353321,21356407,21364663,21368576,21382297,21386850,21388561,21398538,21418457,21476575;Overlapped_tx_length=.,4766,23513,8225,60775,698,86127,2214,14373,1315,3300,1127,2925,112257,101036,3531,6826,4255,29283,40787,2314,710,8817,7555,1233,6557,71652,8729,66297,28204,82,46928,46055,82,31632,88,85,5352,66,11252,125,16204,2640,6190,2206,26904,78,5823,24042,11201,1818,2772,14965,6105,699,24739,17592,14305,13239,54277,80010,2167,3490,151121,13608,32208,36341,7589,16188,16736,3015,8453,6085,12844,3844,97,1858,18223,6815;Overlapped_CDS_length=.,392,1803,0,0,696,1653,0,1431,1077,618,0,957,4923,3054,621,318,0,924,1797,912,0,1110,0,621,1515,984,1095,1575,816,0,2889,1110,0,2322,0,0,1932,0,837,0,2337,1209,0,0,1422,0,663,0,0,678,1041,0,4920,699,0,0,1935,2607,1905,2367,0,0,6309,1500,777,912,0,1818,2523,930,0,0,1422,1908,0,0,1179,0;Overlapped_CDS_percent=.,59,100,0,0,100,100,0,100,88,100,0,100,100,100,100,100,0,100,100,52,0,100,0,100,100,100,82,100,100,0,100,100,0,100,0,0,100,0,100,0,100,100,0,0,100,0,100,0,0,100,100,0,91,100,0,0,100,100,100,100,0,0,100,100,100,100,0,100,100,100,0,0,100,100,0,0,100,0;Frameshift=.,yes,no,.,.,no,no,.,no,no,no,.,no,no,no,no,no,.,no,no,no,.,no,.,no,no,no,no,no,no,.,no,no,.,no,.,.,no,.,no,.,no,no,.,.,no,.,no,.,.,no,no,.,no,no,.,.,no,no,no,no,.,.,no,no,no,no,.,no,no,no,.,.,no,no,.,.,no,.;Exon_count=.,5,14,2,6,3,10,1,10,1,3,1,8,33,25,4,3,2,12,20,1,1,12,12,2,7,8,3,18,6,1,20,9,1,14,1,1,12,1,6,1,11,9,4,1,2,1,5,12,2,6,9,15,1,1,9,7,6,14,7,18,1,8,55,5,5,3,2,21,21,4,2,3,12,5,1,2,10,6;Location=.,intron2-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-intron1;Location2=.,CDS-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR;Dist_nearest_SS=.,597,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,6098;Nearest_SS_type=.,5',.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3';Intersect_start=.,18894835,18900293,18926981,18957980,19017036,19023798,19033674,19117791,19118820,19134505,19159218,19163093,19166985,19318220,19420067,19428408,19434956,19437433,19467348,19510546,19553652,19702025,19704742,19711061,19748300,19770745,19833668,19863044,19929294,19951275,19957418,20008632,20020661,20067763,20073268,20073580,20099397,20102208,20103626,20113924,20119326,20135938,20186251,20193854,20228937,20236656,20301760,20326419,20351090,20366210,20377668,20383730,20455681,20483850,20632119,20689194,20748440,20778873,20795805,20861896,21043842,21055401,21061978,21128400,21213294,21271694,21311379,21319459,21336585,21353392,21356210,21362491,21369453,21383006,21388464,21396680,21400234,21457304;Intersect_end=.,18899601,18923806,18935206,19018755,19017734,19109925,19035888,19132164,19120135,19137805,19160345,19166018,19279242,19419256,19423598,19435234,19439211,19466716,19508135,19512860,19554362,19710842,19712297,19712294,19754857,19842397,19842397,19929341,19957498,19951357,20004346,20054687,20020743,20099395,20073356,20073665,20104749,20102274,20114878,20114049,20135530,20138578,20192441,20196060,20255841,20236734,20307583,20350461,20362291,20368028,20380440,20398695,20461786,20484549,20656858,20706786,20762745,20792112,20850082,20941906,21046009,21058891,21213099,21142008,21245502,21308035,21318968,21335647,21353321,21356407,21364663,21368576,21382297,21386850,21388561,21398538,21418457,21464119;RE_gene=ABL1_(morbid/RE=mTL_miRNA)|ACTN4_(morbid/RE=mTL_miRNA)|ACVR2B_(morbid/RE=mTL_miRNA)|ADA2_(morbid/RE=ABC_enhancer)|ADAR_(morbid/RE=mTL_miRNA)|ADH5_(morbid/RE=mTL_miRNA)|AFF2_(HI=3/morbid/RE=mTL_miRNA)|AGO1_(morbid/RE=mTL_miRNA)|AGO2_(morbid/RE=mTL_miRNA)|AHI1_(morbid/RE=mTL_miRNA)|AHR_(morbid/RE=mTL_miRNA)|AKT1_(morbid/RE=mTL_miRNA)|ALG1_(morbid/RE=mTL_miRNA)|AMH_(morbid/RE=mTL_miRNA)|APCDD1_(morbid/RE=mTL_miRNA)|AR_(HI=3/morbid/RE=mTL_miRNA)|ARID1A_(HI=3/morbid/RE=mTL_miRNA)|ASH1L_(HI=3/morbid/RE=mTL_miRNA)|ATM_(HI=3/morbid/RE=mTL_miRNA)|ATP6AP1_(morbid/RE=mTL_miRNA)|ATP6V0A2_(morbid/RE=mTL_miRNA)|ATP6V1E1_(morbid/RE=ABC_enhancer)|ATR_(morbid/RE=mTL_miRNA)|B4GALT1_(morbid/RE=mTL_miRNA)|BACH1_(morbid/RE=mTL_miRNA)|BAP1_(HI=3/morbid/RE=mTL_miRNA)|BBS5_(morbid/RE=mTL_miRNA)|BCL10_(morbid/RE=mTL_miRNA)|BLOC1S6_(morbid/RE=mTL_miRNA)|BMPR1A_(HI=3/morbid/RE=mTL_miRNA)|BNC2_(morbid/RE=mTL_miRNA)|BRD4_(morbid/RE=mTL_miRNA)|C3_(morbid/RE=mTL_miRNA)|CACNA1C_(morbid/RE=mTL_miRNA)|CAD_(morbid/RE=mTL_miRNA)|CALM3_(morbid/RE=mTL_miRNA)|CAPN15_(morbid/RE=mTL_miRNA)|CAPNS1_(morbid/RE=mTL_miRNA)|CASP14_(morbid/RE=mTL_miRNA)|CBL_(morbid/RE=mTL_miRNA)|CCDC134_(morbid/RE=mTL_miRNA)|CCDC88A_(morbid/RE=mTL_miRNA)|CCND2_(morbid/RE=mTL_miRNA)|CCNQ_(morbid/RE=mTL_miRNA)|CDC42_(morbid/RE=mTL_miRNA)|CEP104_(morbid/RE=mTL_miRNA)|CERS1_(morbid/RE=mTL_miRNA)|CHRDL1_(HI=3/morbid/RE=mTL_miRNA)|CLCC1_(morbid/RE=mTL_miRNA)|CLCN7_(morbid/RE=mTL_miRNA)...;P_gain_phen=22q11.2_recurrent_(DGS/VCFS)_region_(proximal,_A-B)_(includes_TBX1)|Schwannomatosis,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Schwannomatosis,.,.,.,.,.,.,.,.,.;P_gain_source=CLN:906110|CLN:906111|CLN:917324|TS3:ISCA-37433|dbVar:nssv15121202|dbVar:nssv15132168|dbVar:nssv15132429|dbVar:nssv15132430|dbVar:nssv15132553|dbVar:nssv15132642|nssv15139997|dbVar:nssv15132749|dbVar:nssv15133139|dbVar:nssv15133442|dbVar:nssv15133527|dbVar:nssv15133528|dbVar:nssv15133531|dbVar:nssv15133921|dbVar:nssv15134211|dbVar:nssv15134239|dbVar:nssv15134353|dbVar:nssv15136015|dbVar:nssv15137439|dbVar:nssv15138177|dbVar:nssv15138869|dbVar:nssv15140282|dbVar:nssv15141369|dbVar:nssv15153269|dbVar:nssv15156361|dbVar:nssv15605811|dbVar:nssv15605831|dbVar:nssv15605876|dbVar:nssv15755816|dbVar:nssv16207465|dbVar:nssv16736612|dbVar:nssv16736616|dbVar:nssv18830899|dbVar:nssv18830992,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,CLN:906110|CLN:906111|CLN:917324,.,.,.,.,.,.,.,.,.;P_gain_coord=22:18894836-20311784|22:18894836-21461752|22:18894836-21464119|22:18896973-21440514|22:18900756-21075586|22:18908833-21358123|22:18909039-21440514|22:18909045-21464119|22:18912232-20287208|22:18912515-21431174|22:18916828-21050078|22:18916829-20312661|22:18916843-20311810|22:18916843-20311858|22:18916843-20312661|22:18919943-20311763|22:18919943-20659606|22:18919943-20708934|22:18919943-21440514|22:18923899-21431174|22:18937381-21459713|22:18938162-21455556|22:18950767-21455556|22:18970562-21040836|22:18973253-21435405|22:19168759-20942862|22:20895156-21374512|22:20958985-21379958|22:21044197-21440455|22:21045039-21455556|22:21065883-21440455|22:21081261-21440455|22:21086707-21445960|22:21300291-21331188|22:21344737-21344807|22:21345949-21346047|22:21348439-21348534,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:21344737-21344807|22:21345949-21346047|22:21348439-21348534,.,.,.,.,.,.,.,.,.;P_loss_phen=22q11.2_recurrent_(DGS/VCFS)_region_(proximal,_A-B)_(includes_TBX1)|Bernard-Soulier_syndrome,_type_B,_231200_(3)_AR|Giant_platelet_disorder,_isolated,_231200_(3)_AR|Cerebral_dysgenesis,_neuropathy,_ichthyosis,_and_palmoplantar_keratoderma_syndrome,_609528_(3)_AR|Combined_D-2-_and_L-2-hydroxyglutaric_aciduria,_615182_(3)_AR|Myasthenic_syndrome,_congenital,_23,_presynaptic,_618197_(3)_AR|Conotruncal_anomaly_face_syndrome,_217095_(3)|DiGeorge_syndrome,_188400_(3)_AD|Tetralogy_of_Fallot,_187500_(3)_AD|Velocardiofacial_syndrome,_192430_(3)_AD|DiGeorge_syndrome|Gastrointestinal_defects_and_immunodeficiency_syndrome_2,_619708_(3)_AR|Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis,_616531_(3)_AR|Spastic_paraplegia_84,_AR,_619621_(3)_AR|Hyperprolinemia,_type_I,_239500_(3)_AR|Schizophrenia,_susceptibility_to,_4,_600850_(3)_AD|Meier-Gorlin_syndrome_7,_617063_(3)_AR|Metabolic_encephalomyopathic_crises,_recurrent,_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration,_616878_(3)_AR|Noonan_syndrome_10,_616564_(3)_AD|Noonan_syndrome_2,_605275_(3)_AR|Schwannomatosis-2,_susceptibility_to,_615670_(3)_AD|Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|Intellectual_disability|Acute_rhabdomyolysis|Episodic_flaccid_weakness|Seizure|Cardiac_arrhythmia|Thrombophilia_10_due_to_heparin_cofactor_II_deficiency,_612356_(3)_AD|Van_den_Ende-Gupta_syndrome,_600920_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Meier-Gorlin_syndrome_7,_617063_(3)_AR,.,.,.,Bernard-Soulier_syndrome,_type_B,_231200_(3)_AR|Giant_platelet_disorder,_isolated,_231200_(3)_AR,Bernard-Soulier_syndrome,_type_B,_231200_(3)_AR|Giant_platelet_disorder,_isolated,_231200_(3)_AR,Conotruncal_anomaly_face_syndrome,_217095_(3)|DiGeorge_syndrome,_188400_(3)_AD|Tetralogy_of_Fallot,_187500_(3)_AD|Velocardiofacial_syndrome,_192430_(3)_AD|DiGeorge_syndrome,.,.,.,.,.,.,Metabolic_encephalomyopathic_crises,_recurrent,_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration,_616878_(3)_AR|Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|Intellectual_disability|Acute_rhabdomyolysis|Episodic_flaccid_weakness|Seizure|Cardiac_arrhythmia,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Van_den_Ende-Gupta_syndrome,_600920_(3)_AR,.,.,.,.,Gastrointestinal_defects_and_immunodeficiency_syndrome_2,_619708_(3)_AR|Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis,_616531_(3)_AR|Spastic_paraplegia_84,_AR,_619621_(3)_AR|Thrombophilia_10_due_to_heparin_cofactor_II_deficiency,_612356_(3)_AD,Thrombophilia_10_due_to_heparin_cofactor_II_deficiency,_612356_(3)_AD,Cerebral_dysgenesis,_neuropathy,_ichthyosis,_and_palmoplantar_keratoderma_syndrome,_609528_(3)_AR,.,.,.,Noonan_syndrome_10,_616564_(3)_AD|Noonan_syndrome_2,_605275_(3)_AR|Schwannomatosis-2,_susceptibility_to,_615670_(3)_AD,.,.,.,.,.,.,.,.,.;P_loss_hpo=HP:0000730|HP:0001249|HP:0001250|HP:0001267|HP:0001275|HP:0001286|HP:0001303|HP:0001656|HP:0001661|HP:0001665|HP:0001666|HP:0001687|HP:0001721|HP:0002122|HP:0002125|HP:0002182|HP:0002192|HP:0002279|HP:0002306|HP:0002316|HP:0002348|HP:0002382|HP:0002386|HP:0002391|HP:0002402|HP:0002417|HP:0002430|HP:0002431|HP:0002432|HP:0002434|HP:0002437|HP:0002458|HP:0002466|HP:0002479|HP:0002482|HP:0002499|HP:0002543|HP:0002794|HP:0003752|HP:0003767|HP:0004351|HP:0005158|HP:0006833|HP:0006997|HP:0007154|HP:0007176|HP:0007180|HP:0008942|HP:0010520|HP:0011675,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,HP:0000730|HP:0001249|HP:0001250|HP:0001267|HP:0001275|HP:0001286|HP:0001303|HP:0001656|HP:0001661|HP:0001665|HP:0001666|HP:0001687|HP:0001721|HP:0002122|HP:0002125|HP:0002182|HP:0002192|HP:0002279|HP:0002306|HP:0002316|HP:0002348|HP:0002382|HP:0002386|HP:0002391|HP:0002402|HP:0002417|HP:0002430|HP:0002431|HP:0002432|HP:0002434|HP:0002437|HP:0002458|HP:0002466|HP:0002479|HP:0002482|HP:0002499|HP:0002543|HP:0002794|HP:0003752|HP:0003767|HP:0004351|HP:0005158|HP:0006833|HP:0006997|HP:0007154|HP:0007176|HP:0007180|HP:0008942|HP:0010520|HP:0011675,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_source=CLN:226591|CLN:2871255|CLN:959024|HI3:ISCA-37433|dbVar:nssv15119864|dbVar:nssv15120710|dbVar:nssv15124351|dbVar:nssv15124515|dbVar:nssv15129189|dbVar:nssv15130834|dbVar:nssv15130929|dbVar:nssv15131088|dbVar:nssv15131611|dbVar:nssv15132323|nssv15139981|dbVar:nssv15132334|dbVar:nssv15132747|dbVar:nssv15132748|dbVar:nssv15132933|dbVar:nssv15132934|dbVar:nssv15132935|dbVar:nssv15132939|dbVar:nssv15133099|dbVar:nssv15133185|dbVar:nssv15133186|dbVar:nssv15133443|dbVar:nssv15133817|dbVar:nssv15134350|nssv15139984|dbVar:nssv15134354|dbVar:nssv15134360|dbVar:nssv15134361|dbVar:nssv15134635|dbVar:nssv15134703|dbVar:nssv15134820|dbVar:nssv15134849|dbVar:nssv15136233|dbVar:nssv15137726|dbVar:nssv15137759|dbVar:nssv15137802|dbVar:nssv15138106|dbVar:nssv15138475|dbVar:nssv15139405|dbVar:nssv15139434|dbVar:nssv15139445|nssv15774763|dbVar:nssv15139759|dbVar:nssv15140043|dbVar:nssv15140048|dbVar:nssv15140057|dbVar:nssv15141198|dbVar:nssv15141722|dbVar:nssv15142496|dbVar:nssv15143197|dbVar:nssv15143645|dbVar:nssv15144279|dbVar:nssv15144449|dbVar:nssv15153165|dbVar:nssv15154011|dbVar:nssv15155693|dbVar:nssv15156360|dbVar:nssv15162020|dbVar:nssv15162021|dbVar:nssv15605807|dbVar:nssv15605829|dbVar:nssv15605830|nssv16216546|dbVar:nssv15605834|dbVar:nssv15755310|dbVar:nssv15755712|dbVar:nssv15755812|dbVar:nssv15770037|dbVar:nssv15770783|dbVar:nssv15770877|dbVar:nssv15772938|nssv15773614|nssv15775115|nssv15775184|nssv15775592|dbVar:nssv15772982|dbVar:nssv15775129|dbVar:nssv15776509|dbVar:nssv15776863|dbVar:nssv15776865|dbVar:nssv15776871|dbVar:nssv16208595|dbVar:nssv16208596|dbVar:nssv16212111|dbVar:nssv16213307|dbVar:nssv16213808|dbVar:nssv16214784|dbVar:nssv16215255|dbVar:nssv16215257|dbVar:nssv16216543|dbVar:nssv16216544|nssv8639845|nssv15161831|dbVar:nssv16254574|dbVar:nssv16254739|dbVar:nssv16255831|dbVar:nssv16736634|dbVar:nssv17171460|nssv17974163|dbVar:nssv17171461|dbVar:nssv17171462|dbVar:nssv17171559|dbVar:nssv17171582|dbVar:nssv17171772|dbVar:nssv17649936|dbVar:nssv17649973|dbVar:nssv17955605|dbVar:nssv17955606|dbVar:nssv17955868|dbVar:nssv17970829|dbVar:nssv17971092|dbVar:nssv17971094|dbVar:nssv17971356|dbVar:nssv17971399|dbVar:nssv17977042|dbVar:nssv18329601|dbVar:nssv18329824|dbVar:nssv18330264|dbVar:nssv18330322|dbVar:nssv18330820|dbVar:nssv18786380|dbVar:nssv18790095|dbVar:nssv18792883|dbVar:nssv18841927|nssv18830898|dbVar:nssv8639589|nssv15122532|morbid:CDC45|morbid:GP1BB|morbid:LZTR1|morbid:PI4KA|morbid:PRODH|morbid:SCARF2|morbid:SERPIND1|morbid:SLC25A1|morbid:SNAP29|morbid:TANGO2|morbid:TBX1,.,dbVar:nssv17649973|dbVar:nssv17971399,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,dbVar:nssv15124515|morbid:CDC45,.,.,.,dbVar:nssv17977042|morbid:GP1BB,dbVar:nssv17977042|morbid:GP1BB,CLN:959024|morbid:TBX1,.,.,.,.,.,.,CLN:226591|dbVar:nssv15770877|dbVar:nssv15772938|nssv15773614|nssv15775115|nssv15775184|nssv15775592|dbVar:nssv15772982|dbVar:nssv15775129|dbVar:nssv16216543|dbVar:nssv17171772|dbVar:nssv17971094|dbVar:nssv18790095|dbVar:nssv8639589|nssv15122532|morbid:TANGO2,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,morbid:SCARF2,.,.,.,.,morbid:PI4KA|morbid:SERPIND1,morbid:SERPIND1,morbid:SNAP29,.,.,.,CLN:2871255|dbVar:nssv17171582|dbVar:nssv17971092|morbid:LZTR1,.,.,.,.,.,.,.,.,.;P_loss_coord=22:18894836-20238206|22:18894836-20311763|22:18894836-20659606|22:18894836-21440514|22:18894836-21461752|22:18894836-21461811|22:18894836-21464119|22:18896973-20311763|22:18896973-21382953|22:18896973-21440514|22:18899288-18925066|22:18900294-18924066|22:18900295-18923806|22:18900443-21440514|22:18900669-18923820|22:18900669-19747220|22:18900669-19770565|22:18900689-21351637|22:18900896-18923882|22:18901005-21408430|22:18905110-19015451|22:18910311-18923800|22:18910311-18923820|22:18910311-19770565|22:18912232-20287208|22:18912404-21431174|22:18912871-21431174|22:18915348-21463730|22:18916828-20311858|22:18916829-20312661|22:18916829-21041014|22:18916829-21049800|22:18916843-19004772|22:18916843-20310938|22:18916843-20311858|22:18916843-20312661|22:18916843-20716903|22:18916843-20767095|22:18916843-21011216|22:18916843-21033371|22:18916843-21075592|22:18916844-20311858|22:18916844-21033401|22:18916844-21075592|22:18918742-20311922|22:18919580-21460595|22:18919943-20311763|22:18919943-20659606|22:18919943-20708934|22:18919943-21025713|22:18919943-21440514|22:18922152-21449911|22:18938162-20229017|22:18938162-20996250|22:18938162-21455556|22:18962314-21455556|22:18973253-21435405|22:18999804-21455499|22:18999804-21455556|22:19016664-21463730|22:19023802-21440455|22:19023802-21440514|22:19035018-21461811|22:19035324-21464119|22:19036287-21208284|22:19058830-21440514|22:19156118-19529130|22:19163094-19166249|22:19163624-19770565|22:19184001-21416024|22:19336599-21208828|22:19467443-19508131|22:19470352-19481849|22:19647906-21153690|22:19709401-21142058|22:19709436-19712313|22:19709952-19963280|22:19710419-21142058|22:19711062-19712294|22:19711829-19711877|22:19743227-19755855|22:19743425-19747210|22:19743425-19754400|22:19743425-19770565|22:19743474-19747220|22:19747168-19754390|22:19748301-19754857|22:19748451-19748647|22:20008633-20054687|22:20027161-20063237|22:20028564-20053554|22:20028990-20062723|22:20028993-20062955|22:20029136-20062954|22:20029701-20062756|22:20030823-20041691|22:20030823-20053554|22:20030859-20052185|22:20030879-20049206|22:20030879-20052185|22:20036383-20045782|22:20036384-20045781|22:20036385-20045784|22:20039969-20043556|22:20708891-21407690|22:20718171-21427936|22:20733496-21463730|22:20745763-21460658|22:20754408-21440515|22:20754408-21457610|22:20754423-21461752|22:20778874-20792112|22:20921343-21459713|22:21061979-21213099|22:21062169-21463730|22:21062567-21463730|22:21065883-21455556|22:21067570-21414817|22:21069074-21463730|22:21074921-21440514|22:21075576-21454721|22:21081285-21457610|22:21128401-21142008|22:21213295-21245502|22:21335907-21346541|22:21336586-21353321|22:21336662-21337398|22:21336662-21351637|22:21348908-21348985,.,22:18900295-18923806|22:18910311-18923800,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:19467443-19508131|22:19470352-19481849,.,.,.,22:19711062-19712294|22:19711829-19711877,22:19711062-19712294|22:19711829-19711877,22:19748301-19754857|22:19748451-19748647,.,.,.,.,.,.,22:20008633-20054687|22:20028564-20053554|22:20030823-20041691|22:20030823-20053554|22:20030859-20052185|22:20030879-20049206|22:20030879-20052185|22:20036383-20045782|22:20036384-20045781|22:20036385-20045784|22:20039969-20043556,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:20778874-20792112,.,.,.,.,22:21061979-21213099|22:21128401-21142008,22:21128401-21142008,22:21213295-21245502,.,.,.,22:21336586-21353321|22:21336662-21337398|22:21336662-21351637|22:21348908-21348985,.,.,.,.,.,.,.,.,.;P_ins_source=CLN:1349334|dbVar:nssv17974796,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,CLN:1349334|dbVar:nssv17974796,.,.,.,.,.,.,.,.,.;P_ins_coord=22:21337344-21337343|22:21337344-21337456,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:21337344-21337343|22:21337344-21337456,.,.,.,.,.,.,.,.,.;po_P_gain_phen=22q11.2_recurrent_(DGS/VCFS)_region_(proximal,_A-D)_(includes_TBX1);po_P_gain_source=dbVar:nssv15161990|dbVar:nssv15139753|dbVar:nssv15150031|dbVar:nssv15150491|dbVar:nssv15146973|dbVar:nssv15135173|dbVar:nssv15137211|dbVar:nssv15129128|dbVar:nssv15161991|dbVar:nssv15161992|dbVar:nssv15164031|dbVar:nssv16254742|dbVar:nssv16297047|dbVar:nssv15151140|nssv16207460|dbVar:nssv15141953|dbVar:nssv15156366|nssv15772157|dbVar:nssv17976875|dbVar:nssv16207463|dbVar:nssv16296938|dbVar:nssv16207464|dbVar:nssv15774756|dbVar:nssv18329565|dbVar:nssv15149512|nssv15150794|dbVar:nssv15139758|dbVar:nssv15755803|dbVar:nssv15774287|dbVar:nssv15605979|dbVar:nssv15139756|dbVar:nssv15605980|dbVar:nssv15137771|dbVar:nssv15132295|dbVar:nssv15133039|dbVar:nssv15133301|dbVar:nssv15132518|dbVar:nssv15134365|dbVar:nssv15146613|dbVar:nssv15133111|dbVar:nssv15147269|dbVar:nssv15121201|dbVar:nssv15136264|dbVar:nssv15605803|dbVar:nssv15605804|dbVar:nssv16736606|dbVar:nssv15128891|dbVar:nssv15126571|dbVar:nssv15128500|dbVar:nssv16254735|dbVar:nssv15140068|dbVar:nssv15137505|dbVar:nssv15128758|dbVar:nssv15152138|dbVar:nssv15154014|dbVar:nssv15755815|dbVar:nssv15755817|dbVar:nssv16255668|dbVar:nssv18329661|dbVar:nssv18330205|dbVar:nssv15156359|dbVar:nssv15142823|dbVar:nssv15140066|dbVar:nssv15133432|dbVar:nssv15605805|dbVar:nssv15605808|dbVar:nssv15605806|dbVar:nssv15132858|dbVar:nssv15133520|dbVar:nssv15132127|dbVar:nssv15133128|dbVar:nssv15136566|dbVar:nssv15133389|dbVar:nssv15140044|dbVar:nssv15133925|dbVar:nssv15138146|dbVar:nssv15133393|nssv15139545|dbVar:nssv15135020|dbVar:nssv15132566|dbVar:nssv15164039|dbVar:nssv17955656|dbVar:nssv15132423|dbVar:nssv15132330|dbVar:nssv15126758|dbVar:nssv15127771|dbVar:nssv15126436|dbVar:nssv17649918|dbVar:nssv15162011|dbVar:nssv15125959|dbVar:nssv17955842|dbVar:nssv15139556|dbVar:nssv15122631|dbVar:nssv15123767|dbVar:nssv15162014|dbVar:nssv15143627|dbVar:nssv16865904|dbVar:nssv15123759|dbVar:nssv17650003|dbVar:nssv15755805|dbVar:nssv15132167|dbVar:nssv15133526|dbVar:nssv15162019|dbVar:nssv15145463|dbVar:nssv15145234|dbVar:nssv16207634|dbVar:nssv15605810|dbVar:nssv15605809|dbVar:nssv18842027|dbVar:nssv18842024|nssv18842046|dbVar:nssv18326316|dbVar:nssv15139749|dbVar:nssv15140369|dbVar:nssv15136643|dbVar:nssv15131931|nssv15133075|dbVar:nssv15131925|dbVar:nssv15134715|dbVar:nssv15132426|TS3:ISCA-37446|dbVar:nssv15605828|dbVar:nssv15153271|dbVar:nssv17976874|dbVar:nssv15139887|dbVar:nssv15137698|dbVar:nssv15139242|dbVar:nssv18329574|dbVar:nssv18329591|dbVar:nssv17976884|dbVar:nssv15132247|nssv15139527|dbVar:nssv15131997|nssv15139348|dbVar:nssv15137835|dbVar:nssv15132026|nssv15139977|dbVar:nssv15127741|dbVar:nssv18830785|dbVar:nssv15154013|dbVar:nssv16254573|dbVar:nssv16255670|dbVar:nssv15133914|dbVar:nssv15145464|dbVar:nssv15755306|dbVar:nssv15132169|dbVar:nssv17976883|dbVar:nssv16207466|dbVar:nssv15132044|dbVar:nssv15139694|dbVar:nssv15120579|dbVar:nssv15133646|dbVar:nssv15139596|dbVar:nssv15132083|dbVar:nssv18330192|dbVar:nssv15139716|dbVar:nssv15135998|dbVar:nssv15139748;po_P_gain_coord=22:16054668-51243435|22:16054692-27296513|22:16054692-51220902|22:16054692-51237463|22:16054692-51237518|22:16087695-19010508|22:16087695-20311784|22:16114245-18917748|22:16114245-20737903|22:16114245-51195728|22:16114245-51211392|22:16197006-51224252|22:16800001-21500000|22:16888900-18916828|22:16888900-20311858|22:16888900-20312661|22:16888900-21915509|22:16888900-22290476|22:16888900-26483608|22:16888900-27657507|22:16888900-51197838|22:16888901-18916828|22:16888901-51197838|22:17012936-21431054|22:17041670-20247250|22:17055734-20312661|22:17072087-20130474|22:17264512-23238029|22:17289828-20311922|22:17397499-18984519|22:17397499-20311763|22:17397499-20659606|22:17397499-20708934|22:17397499-21505417|22:17397499-24754904|22:17397499-51178264|22:17397634-19584890|22:17397634-51178213|22:18533255-18942804|22:18570313-19184416|22:18609713-21408430|22:18611224-21408430|22:18628020-20311763|22:18628133-21712996|22:18628133-21900562|22:18628133-51244566|22:18628148-21722313|22:18637140-20289862|22:18640730-21465659|22:18641480-21917191|22:18644791-21465659|22:18645354-21465659|22:18648856-21461017|22:18648856-21927646|22:18648867-21465659|22:18648868-20311858|22:18648868-21798907|22:18649190-20311858|22:18650665-21440455|22:18650665-21440514|22:18650676-21455556|22:18650746-21460220|22:18650804-21386010|22:18650804-21460220|22:18651615-21440455|22:18652638-21914178|22:18660554-21455556|22:18661700-21505445|22:18661700-22905025|22:18661725-20311763|22:18661725-21025713|22:18661725-21440514|22:18661725-21461752|22:18661725-21505417|22:18661725-21661435|22:18661725-32217179|22:18675474-21465050|22:18687211-19060954|22:18704555-21411284|22:18706002-21440514|22:18713492-20412989|22:18713492-21712996|22:18713492-21917191|22:18841375-21465101|22:18844633-21463730|22:18848021-21468378|22:18873002-21469900|22:18874966-21028946|22:18877788-20306993|22:18877788-21462353|22:18878410-21467387|22:18886916-20278471|22:18886916-21461017|22:18886916-23421058|22:18889978-21463189|22:18890265-21464056|22:18890272-21505417|22:18890272-21561514|22:18891399-21463730|22:18891967-20311852|22:18891967-21631412|22:18892576-20306993|22:18892576-20308800|22:18892576-21460220|22:18893839-20508931|22:18893839-21416074|22:18893889-21414817|22:18894340-21032422|22:18894340-21440455|22:18894821-21505445|22:18894836-21505417|22:18894836-21561514|22:18894836-21809009|22:18909039-21798755|22:18912232-21465672|22:18912515-21922035|22:18916828-21465659|22:18916828-21804886|22:18916829-21465659|22:18916829-21465662|22:18916843-21465659|22:18916844-21798907|22:18916844-21804563|22:18917048-21465659|22:18919943-21505417|22:18919943-21561514|22:18919943-21801604|22:18919943-21809009|22:18919988-21561468|22:18936190-21464809|22:18970561-21465662|22:19024657-21465662|22:19035090-22672555|22:19058830-21561514|22:19346606-21864619|22:19819478-21464764|22:20402634-21561514|22:20732809-21465659|22:20732809-25193541|22:20748977-21499971|22:20754423-21505417|22:21022841-22712836|22:21025655-21505417|22:21025655-22336268|22:21025655-22400806|22:21029657-22485776|22:21081261-21505417|22:21261515-37583387|22:21400684-23654222;po_P_gain_percent=7.30|22.85|7.31|7.30|7.30|3.96|33.54|0.82|39.86|7.32|7.32|7.34|54.67|1.08|41.40|41.41|51.11|47.57|26.78|23.86|7.49|1.08|7.49|57.40|42.19|43.53|40.40|43.01|46.89|5.65|48.62|54.10|54.78|62.54|34.92|7.61|31.55|7.61|11.71|47.16|89.81|89.86|84.15|83.29|78.51|7.88|83.04|84.41|90.95|78.43|91.08|91.10|91.25|78.36|91.21|85.21|81.56|85.23|91.25|91.25|91.30|91.31|91.08|91.31|91.28|78.78|91.62|90.35|60.55|85.87|90.14|91.61|91.67|90.35|85.65|18.95|92.10|44.45|92.97|93.09|89.33|85.66|80.20|97.92|98.08|98.05|98.94|99.08|98.81|99.34|99.24|99.43|99.69|56.67|99.81|99.82|98.25|96.18|99.87|99.80|93.79|99.84|99.84|99.91|99.94|99.96|99.96|99.98|99.98|98.42|98.42|96.35|88.17|88.42|99.94|84.78|99.94|88.20|99.94|99.94|99.94|88.38|88.21|99.94|98.40|96.31|88.29|88.06|96.31|99.97|99.94|99.94|66.78|96.11|84.09|99.96|91.60|99.79|16.39|95.23|94.50|26.11|91.39|33.45|31.88|29.84|90.26|1.24|2.81;po_P_loss_phen=22q11.2_recurrent_(DGS/VCFS)_region_(proximal,_A-D)_(includes_TBX1);po_P_loss_source=dbVar:nssv15134634|dbVar:nssv16208592|dbVar:nssv16208593|dbVar:nssv15141423|dbVar:nssv15132388|dbVar:nssv15128094|dbVar:nssv15132068|dbVar:nssv15133055|dbVar:nssv18787557|nssv18791888|dbVar:nssv16207650|dbVar:nssv15153272|dbVar:nssv15135754|dbVar:nssv15133431|nssv15139986|dbVar:nssv15125556|dbVar:nssv15126775|dbVar:nssv15133864|dbVar:nssv15755811|dbVar:nssv15755813|dbVar:nssv18326404|dbVar:nssv15126915|dbVar:nssv15128185|dbVar:nssv15145459|dbVar:nssv15145460|dbVar:nssv15138286|dbVar:nssv15154015|nssv18326430|dbVar:nssv18330227|dbVar:nssv17976889|dbVar:nssv17976891|dbVar:nssv15153273|dbVar:nssv18330460|dbVar:nssv17976888|dbVar:nssv15145461|dbVar:nssv15138328|dbVar:nssv17976880|dbVar:nssv15154017|dbVar:nssv18329577|dbVar:nssv15140316|dbVar:nssv15133433|dbVar:nssv18326382|dbVar:nssv17955872|dbVar:nssv15133434|dbVar:nssv16255835|dbVar:nssv15132708|dbVar:nssv15134184|dbVar:nssv15132128|nssv15139349|dbVar:nssv15134982|dbVar:nssv15135883|dbVar:nssv15133394|nssv16091745|dbVar:nssv15132006|nssv15139990|dbVar:nssv15137884|dbVar:nssv15133435|dbVar:nssv18792765|dbVar:nssv15135454|dbVar:nssv15133438|nssv15140028|dbVar:nssv15132230|nssv15139684|dbVar:nssv15132655|nssv15139976|dbVar:nssv15136079|dbVar:nssv15132507|nssv15139975|dbVar:nssv15132389|dbVar:nssv17976452|dbVar:nssv15164040|dbVar:nssv15137872|dbVar:nssv16254738|dbVar:nssv15127636|dbVar:nssv15128166|dbVar:nssv15127784|dbVar:nssv16208773|dbVar:nssv15145231|dbVar:nssv15145040|dbVar:nssv18786377|dbVar:nssv15145232|dbVar:nssv15139558|dbVar:nssv15163611|dbVar:nssv16215256|dbVar:nssv15128065|dbVar:nssv17955534|dbVar:nssv15163612|dbVar:nssv15145462|dbVar:nssv15145233|dbVar:nssv15163613|dbVar:nssv15132390|dbVar:nssv15163614|dbVar:nssv15162012|dbVar:nssv15139255|dbVar:nssv15162013|dbVar:nssv15162015|dbVar:nssv17976449|dbVar:nssv17955549|dbVar:nssv15162016|nssv16215222|nssv16215239|nssv16865884|dbVar:nssv15162017|dbVar:nssv15164042|dbVar:nssv15143222|dbVar:nssv15162018|dbVar:nssv16865881|dbVar:nssv15164043|dbVar:nssv15755824|dbVar:nssv17650004|dbVar:nssv17649858|dbVar:nssv16297048|dbVar:nssv17517456|dbVar:nssv15141730|dbVar:nssv15126093|dbVar:nssv15125439|dbVar:nssv15755804|dbVar:nssv15121171|dbVar:nssv15133439|dbVar:nssv15132392|dbVar:nssv15132132|dbVar:nssv15133440|dbVar:nssv15136213|dbVar:nssv15605874|nssv15605879|dbVar:nssv17976881|dbVar:nssv15119655|dbVar:nssv18842051|dbVar:nssv17173212|dbVar:nssv17173202|dbVar:nssv18792648|dbVar:nssv16091922|dbVar:nssv15143862|dbVar:nssv17976675|dbVar:nssv18830700|dbVar:nssv18786378|dbVar:nssv18786379|dbVar:nssv15140698|dbVar:nssv15139562|dbVar:nssv15140747|dbVar:nssv15140051|dbVar:nssv15133317|nssv15143213|dbVar:nssv15131926|dbVar:nssv15605919|dbVar:nssv15755810|HI3:ISCA-37446|dbVar:nssv15139269|dbVar:nssv15137499|dbVar:nssv15138712|dbVar:nssv18330193|dbVar:nssv15139855|nssv18326386|dbVar:nssv15139854|nssv15153270|dbVar:nssv15154016|nssv17976890|dbVar:nssv15152149|dbVar:nssv15137491|dbVar:nssv18330326|dbVar:nssv18329598|dbVar:nssv18330218|dbVar:nssv15141653|dbVar:nssv15142207|dbVar:nssv15755814|dbVar:nssv15132248|nssv15139690|dbVar:nssv15134351|dbVar:nssv15132463|nssv15139699|dbVar:nssv15132523|dbVar:nssv15155695|dbVar:nssv18831006|dbVar:nssv17976279|dbVar:nssv15139289|dbVar:nssv15139467|dbVar:nssv15142401|dbVar:nssv15134356|dbVar:nssv18330006|dbVar:nssv15137446|dbVar:nssv17976741|dbVar:nssv15153268|dbVar:nssv15156357|dbVar:nssv18842023|dbVar:nssv15132608|dbVar:nssv15145465|dbVar:nssv15145466|dbVar:nssv15145235|dbVar:nssv15772502|dbVar:nssv15154008|dbVar:nssv15156354|dbVar:nssv15755308|nssv15755309|dbVar:nssv15155696|dbVar:nssv18330327|dbVar:nssv18326378|dbVar:nssv18329593|dbVar:nssv18330275|dbVar:nssv18329587|dbVar:nssv18329620|dbVar:nssv17956682|dbVar:nssv15776637|dbVar:nssv17649919|dbVar:nssv18326434|dbVar:nssv18326440|dbVar:nssv15120712|dbVar:nssv15139564|dbVar:nssv16208598|dbVar:nssv15755307|dbVar:nssv15156347|dbVar:nssv18330257|dbVar:nssv15755311|dbVar:nssv17957425|dbVar:nssv15121593|dbVar:nssv15154007|dbVar:nssv15134856|dbVar:nssv18330729|dbVar:nssv18330196|dbVar:nssv17977102;po_P_loss_coord=22:16087695-19363465|22:16888900-20125005|22:16888900-20730144|22:16888901-20026751|22:17019016-20718227|22:17177912-19892632|22:17397499-20311763|22:17397499-20708934|22:17565983-20052185|22:18475386-23764120|22:18626109-21800797|22:18628020-21464119|22:18628020-21505417|22:18628133-21561468|22:18628133-21883879|22:18628148-21440515|22:18631365-21800471|22:18636750-21800471|22:18639781-21910280|22:18641480-21712996|22:18641480-21722262|22:18642647-21717111|22:18642647-21742277|22:18644242-21465662|22:18644543-21465659|22:18644544-21800797|22:18644791-21798907|22:18644791-21800471|22:18644791-21915509|22:18644792-21041014|22:18645354-21800797|22:18646694-21631412|22:18648857-21465662|22:18648867-21798907|22:18648867-21800797|22:18648868-21465659|22:18650665-21440455|22:18650676-21455556|22:18655799-21726191|22:18660136-21737597|22:18660554-21455556|22:18661700-21457610|22:18661700-21505445|22:18661725-20659606|22:18661725-21440514|22:18661725-21461811|22:18661725-21464119|22:18661725-21505417|22:18661725-21561514|22:18661725-21809009|22:18671630-21536841|22:18689517-21588615|22:18706002-20311763|22:18706002-20659606|22:18706002-21025713|22:18706002-21440514|22:18706002-21464119|22:18706002-21505417|22:18706002-21809009|22:18718029-21326012|22:18728119-21811991|22:18765086-21661435|22:18765103-21661435|22:18788000-21065894|22:18788000-21468378|22:18788000-21684798|22:18789966-21591197|22:18790223-21697998|22:18820423-21477877|22:18834446-21414817|22:18834453-21575702|22:18844633-21463730|22:18844633-21608479|22:18844633-21797812|22:18848021-21468378|22:18861210-21630630|22:18861749-21463730|22:18868433-20331055|22:18868433-21477877|22:18872509-21465050|22:18874457-20306317|22:18875870-21470273|22:18875957-21466715|22:18876631-21465659|22:18878410-21465050|22:18878410-21907671|22:18884515-21484289|22:18884715-21483289|22:18886916-21463730|22:18886916-21465050|22:18886916-21467387|22:18886916-21811991|22:18889491-20312668|22:18889491-21463730|22:18889491-21466715|22:18889491-21917190|22:18889572-21464697|22:18889694-21465485|22:18889951-21466053|22:18889970-21462658|22:18890043-21440455|22:18890163-21464056|22:18890222-21561468|22:18890265-21540347|22:18890272-18999862|22:18890272-20328113|22:18890272-20659606|22:18890272-21394730|22:18890272-21461811|22:18891527-21796215|22:18892576-21460220|22:18893345-21650280|22:18893736-18924066|22:18893839-20307561|22:18893883-21563420|22:18893883-21571027|22:18893887-21386103|22:18893888-18923800|22:18893889-18973671|22:18893889-21414817|22:18893889-21481925|22:18893889-21570386|22:18894079-21414817|22:18894340-20255110|22:18894340-20255154|22:18894340-21440455|22:18894340-21440514|22:18894836-21505417|22:18894836-21561514|22:18900756-21800277|22:18912232-21465672|22:18912232-21465672|22:18916828-21465662|22:18916829-21465659|22:18916829-21465662|22:18916829-21800797|22:18916843-21465659|22:18916843-21465662|22:18916843-21798907|22:18916843-21804716|22:18916843-21804886|22:18916844-21465659|22:18916844-21800471|22:18916844-21915509|22:18917048-21465659|22:18917048-21465662|22:18919478-21800471|22:18919943-21505417|22:18919943-21505558|22:18919943-21561514|22:18919943-21809009|22:18935464-21465659|22:18936190-21464809|22:18936191-21464809|22:18970562-21465662|22:19024657-21465659|22:19024658-21465662|22:19029603-21505417|22:19046678-21465662|22:20279767-23822986|22:20310411-21804886|22:20311904-21465659|22:20311904-21800797|22:20609933-21576553|22:20659548-21561514|22:20703817-21503296|22:20703817-21631412|22:20713276-21477877|22:20716877-21465659|22:20716877-21465662|22:20716877-21798907|22:20716877-21800471|22:20716877-23819697|22:20716878-21465659|22:20725309-21465659|22:20725310-21804563|22:20725319-21800797|22:20728958-21798907|22:20728958-21800797|22:20728958-21915096|22:20729389-21465662|22:20730997-21465342|22:20732809-21465659|22:20732809-21800471|22:20733428-21505417|22:20749626-23972878|22:21029656-22481498|22:21033587-21800471|22:21049800-21465662|22:21049801-21465662|22:21059670-21800471|22:21059670-21804716|22:21065883-21937680|22:21075676-21465662|22:21081261-24593820|22:21092649-21465662|22:21188488-21804597|22:21462567-22962196;po_P_loss_percent=14.31|38.01|47.78|36.07|49.29|36.76|48.62|54.78|46.55|48.58|80.93|90.59|89.29|87.59|78.92|90.52|81.07|81.21|78.56|83.65|83.40|83.57|82.89|91.06|91.07|81.40|81.46|81.42|78.55|89.57|81.42|86.08|91.21|81.56|81.51|91.21|91.25|91.30|83.68|83.49|91.62|91.66|90.35|88.33|91.61|91.67|91.68|90.35|88.60|81.63|89.67|88.62|88.24|90.33|91.86|93.09|93.15|91.78|82.80|93.22|83.31|88.71|88.71|95.31|95.86|88.69|91.72|88.36|96.68|97.66|93.73|98.08|92.96|87.00|98.05|92.77|98.73|98.19|98.46|99.10|98.58|99.03|99.17|99.24|99.33|84.82|98.83|98.87|99.69|99.66|99.57|87.84|99.62|99.79|99.69|84.86|99.77|99.75|99.74|99.81|99.81|99.82|96.18|96.95|95.84|99.68|99.74|99.82|99.82|88.45|99.91|93.19|96.37|99.93|96.24|95.97|99.96|96.83|98.81|99.96|99.28|95.99|99.97|99.96|99.96|99.98|99.98|98.42|96.35|88.41|99.94|99.94|99.94|99.94|99.94|88.33|99.94|99.94|88.38|88.21|88.20|99.94|88.34|84.95|99.94|99.94|88.33|98.40|98.40|96.31|88.06|99.94|99.97|99.97|99.94|99.94|99.94|98.33|99.94|33.43|77.20|99.87|77.39|88.37|89.20|95.10|81.96|98.20|99.79|99.79|69.06|68.96|24.08|99.79|99.79|68.46|68.70|68.71|68.59|61.98|99.79|99.83|99.79|68.50|94.65|22.17|29.92|56.14|99.63|99.63|54.60|54.29|45.68|99.60|10.90|99.59|44.74|0.10;P_snvindel_nb=626,.,11,.,.,.,.,.,.,.,.,.,9,.,.,.,.,.,.,10,3,.,.,8,8,27,.,.,.,1,.,.,27,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3,.,.,.,.,8,.,15,.,.,.,502,.,.,.,.,.,.,.,.,.;P_snvindel_phen=2-hydroxyglutaric_aciduria|Abnormality_of_metabolism/homeostasis|Acute_rhabdomyolysis|Autism_spectrum_disorder|Bardet-Biedl_syndrome|Bernard_Soulier_syndrome|CEDNIK_syndrome|CLDN5-related_neurodevelopmental_disorder|CLDN5_deficiency|Cardiac_arrhythmia|Cardiovascular_phenotype|D,L-2-hydroxyglutaric_aciduria|DiGeorge_syndrome|Emery-Dreifuss_muscular_dystrophy|Episodic_flaccid_weakness|Hereditary_cancer-predisposing_syndrome|Hypertrophic_cardiomyopathy_1|Hypomyelinating_leukodystrophy_2|Inborn_genetic_diseases|Intellectual_disability|LZTR1-related_disorder|LZTR1-related_schwannomatosis|Male_infertility_with_azoospermia_or_oligozoospermia_due_to_single_gene_mutation|Meier-Gorlin_syndrome_7|Metabolic_crises_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration|Myasthenic_syndrome,_congenital,_23,_presynaptic|Neurodevelopmental_disorder|Noonan_syndrome|Noonan_syndrome_1|Noonan_syndrome_10|Noonan_syndrome_2|Noonan_syndrome_and_Noonan-related_syndrome|PI4KA-related_disorder|Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis|Proline_dehydrogenase_deficiency|RASopathy|Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|SLC25A1-related_disorder|Schizophrenia_4|Schwannomatosis|See_cases|Seizure|Spastic_paraplegia_84,_autosomal_recessive|TANGO2-related_disorder|TBX1-related_disorder|Thrombocytopenia|Van_den_Ende-Gupta_syndrome|Velocardiofacial_syndrome|not_specified,.,Inborn_genetic_diseases|Proline_dehydrogenase_deficiency|Schizophrenia_4,.,.,.,.,.,.,.,.,.,2-hydroxyglutaric_aciduria|D,L-2-hydroxyglutaric_aciduria|Inborn_genetic_diseases|Myasthenic_syndrome,_congenital,_23,_presynaptic|SLC25A1-related_disorder,.,.,.,.,.,.,Meier-Gorlin_syndrome_7,CLDN5-related_neurodevelopmental_disorder|CLDN5_deficiency|Neurodevelopmental_disorder,.,.,Bernard_Soulier_syndrome|Thrombocytopenia,Bernard_Soulier_syndrome|Thrombocytopenia,DiGeorge_syndrome|Inborn_genetic_diseases|TBX1-related_disorder|Velocardiofacial_syndrome,.,.,.,Bardet-Biedl_syndrome,.,.,Abnormality_of_metabolism/homeostasis|Acute_rhabdomyolysis|Cardiac_arrhythmia|Episodic_flaccid_weakness|Inborn_genetic_diseases|Intellectual_disability|Metabolic_crises_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration|Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|Seizure|TANGO2-related_disorder,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Van_den_Ende-Gupta_syndrome,.,.,.,.,PI4KA-related_disorder|Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis|Spastic_paraplegia_84,_autosomal_recessive,.,CEDNIK_syndrome|Hypomyelinating_leukodystrophy_2|Inborn_genetic_diseases,.,.,.,Autism_spectrum_disorder|Cardiovascular_phenotype|Emery-Dreifuss_muscular_dystrophy|Hereditary_cancer-predisposing_syndrome|Hypertrophic_cardiomyopathy_1|LZTR1-related_disorder|LZTR1-related_schwannomatosis|Male_infertility_with_azoospermia_or_oligozoospermia_due_to_single_gene_mutation|Noonan_syndrome|Noonan_syndrome_1|Noonan_syndrome_10|Noonan_syndrome_2|Noonan_syndrome_and_Noonan-related_syndrome|RASopathy|Schwannomatosis|See_cases|not_specified,.,.,.,.,.,.,.,.,.;B_gain_source=.,DDD:56146|DDD:56173|DDD:56174|dgv543n27|dgv99e203|gnomAD-SV_v2.1_DUP_22_50647,DDD:56146|DDD:56173|DDD:56174|dgv543n27|dgv99e203|gnomAD-SV_v2.1_DUP_22_50647,1000g|DDD:56146|DDD:56173|DDD:56174|dgv543n27|dgv99e203|esv3647250|gnomAD-SV_v2.1_DUP_22_50652,dgv543n27,dgv543n27,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,DDD:56225|DDD:56226,DDD:56225|DDD:56226|DDD:56232|DDD:56234,DDD:56225|DDD:56226|DDD:56232|DDD:56234,DDD:56226|DDD:56232|DDD:56234,DDD:56226|DDD:56232,DDD:56226,DDD:56226,DDD:56226,DDD:56226|DDD:56255,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,esv2760719,esv2760719,esv2760719,esv2760719;B_gain_coord=.,22:18655861-19006984|22:18667571-18994853|22:18876429-19006125|22:18877788-19033532|22:18882313-19012377|22:18884850-18926400,22:18655861-19006984|22:18667571-18994853|22:18876429-19006125|22:18877788-19033532|22:18882313-19012377|22:18884850-18926400,22:18655861-19006984|22:18667571-18994853|22:18876429-19006125|22:18877788-19033532|22:18882313-19012377|22:18912158-18998999|22:18912158-18998999|22:18924000-18940000,22:18877788-19033532,22:18877788-19033532,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:20313251-20369884|22:20322450-20718598,22:20313251-20369884|22:20322450-20718598|22:20330330-20450295|22:20343574-20380608,22:20313251-20369884|22:20322450-20718598|22:20330330-20450295|22:20343574-20380608,22:20322450-20718598|22:20330330-20450295|22:20343574-20380608,22:20322450-20718598|22:20330330-20450295,22:20322450-20718598,22:20322450-20718598,22:20322450-20718598,22:20322450-20718598|22:20659548-20717455,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:21383283-21845355,22:21383283-21845355,22:21383283-21845355,22:21383283-21845355;B_gain_AFmax=.,0.0355,0.0355,0.0355,0.01,0.01,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.0509,0.0509,0.0509,0.0509,0.0509,0.0509,0.0509,0.0509,0.0509,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.01,0.01,0.01,0.01;B_loss_source=.,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,DDD:56225|DDD:56226|dbVar,DDD:56225|DDD:56226|DDD:56232|DDD:56234|dbVar,DDD:56225|DDD:56226|DDD:56232|DDD:56234|dbVar,DDD:56226|DDD:56232|DDD:56234|dbVar,DDD:56226|DDD:56232|dbVar,DDD:56226|HI40:ISCA-46728|dbVar|dgv817e199,DDD:56226|HI40:ISCA-46728|dbVar|dgv817e199,DDD:56226|dbVar,DDD:56226|DDD:56255|dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar;B_loss_coord=.,chr22:18884924-19013000|chr22:18884925-18927000,chr22:18884924-19013000|chr22:18884925-18927000,chr22:18884924-19013000|chr22:18912157-18998999,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000|chr22:19161075-19192940,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000|chr22:19528613-19558447|chr22:19531786-19559055,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000|22:20313251-20369884|22:20322450-20718598,chr22:18934999-21466000|22:20313251-20369884|22:20322450-20718598|22:20330330-20450295|22:20343574-20380608,chr22:18934999-21466000|22:20313251-20369884|22:20322450-20718598|22:20330330-20450295|22:20343574-20380608,chr22:18934999-21466000|22:20322450-20718598|22:20330330-20450295|22:20343574-20380608|chr22:20366424-20403000|chr22:20374000-20389000,chr22:18934999-21466000|22:20322450-20718598|22:20330330-20450295|chr22:20366424-20403000,chr22:18934999-21466000|22:20322450-20718598|22:20423846-20488792|22:20428071-20499197,chr22:18934999-21466000|22:20322450-20718598|22:20423846-20488792|22:20428071-20499197,chr22:18934999-21466000|22:20322450-20718598,chr22:18934999-21466000|22:20322450-20718598|22:20659548-20717455,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000|chr22:21027000-21048000,chr22:18934999-21466000|chr22:21052000-21466000,chr22:18934999-21466000|chr22:21052000-21466000,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21078735-21159481,chr22:18934999-21466000|chr22:21052000-21466000,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776|chr22:21358356-21370047|chr22:21360600-21369738,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21256865-21435776,chr22:18934999-21466000|chr22:21052000-21466000|chr22:21455959-21464881|chr22:21456000-21467000;B_loss_AFmax=.,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.0959,0.0959,0.0959,0.0284,0.0189,0.03,0.03,0.0118,0.0604,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01,0.01;B_inv_source=IMH;B_inv_coord=22:17036164-22613666,22:17036164-22613666|22:18655109-20719124,22:17036164-22613666|22:18655109-20719124,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:18904624-20296851|22:18939719-20275949|22:18954422-20259184|22:18957903-20255847|22:19014638-21718005,22:17036164-22613666|22:18655109-20719124|22:1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0.128056348383697,.,.,0.554183575869215,2.94244265911253,.,.,.,-0.002241469611443,2.36782594176173,-0.373621593221624,.,0.348188483468328,0.465852147917107,.,0.425870777992255,1.46130508236304,.,0.690563071344625,.,.,-1.98609532754524,.,-1.04492215962902,.,-0.408428770523539,.,.,.,-0.800223805913347,.,0.698499439551705,.,.,.,.,.,.,.,.,.,2.28676628831896,.,-0.0046056816669864,0.672972182845271,.,.,1.20573288011437,-0.289055396385536,1.58078637399342,0.477351976371369,.,0.687283106386744,0.246895000414255,-1.50983365445593,.,.,-0.990180484365383,-0.387275128092876,.,.,.,.;ExAC_misZ=5.29477062168781,-0.22775445384527,0.772811927860626,.,.,.,0.817637812863819,.,.,1.02819617031079,0.932740471460801,.,1.99698466418685,-1.19469008098196,3.98018572942351,-0.450618700229176,0.836381939603491,.,.,1.2901097836858,3.34022892264706,.,.,.,0.855158778511627,3.38001100960461,0.590344002361273,.,0.327140414338646,0.557839148920189,.,-0.701931719398633,0.279301120222081,.,4.03153091509844,.,.,-0.363927890852326,.,2.06932219421127,.,2.39258092860216,.,.,.,1.18081437151802,.,0.174075190759776,.,.,.,.,.,.,.,.,.,2.39892044394279,.,2.85964800561254,2.65389095774821,.,.,5.29477062168781,-0.349034099945665,-0.841707455415557,3.00980268645085,.,1.33036583543754,0.909128978651125,1.16392737773964,.,.,-0.63060581685217,-1.12481109733158,.,.,.,.;GenCC_disease=.,.,hyperprolinemia_type_1,.,.,.,schizophrenia,.,.,.,.,.,D,L-2-hydroxyglutaric_aciduria|mitochondrial_disease|myasthenic_syndrome,_congenital,_23,_presynaptic|presynaptic_congenital_myasthenic_syndrome,congenital_insensitivity_to_pain_with_severe_intellectual_disability|multiple_congenital_anomalies/dysmorphic_syndrome,neurodevelopmental_disorder,.,.,.,.,Meier-Gorlin_syndrome|Meier-Gorlin_syndrome_7,neurodevelopmental_disorder,.,.,.,Bernard-Soulier_syndrome|autosomal_dominant_macrothrombocytopenia,22q11.2_deletion_syndrome|conotruncal_heart_malformations|velocardiofacial_syndrome,.,.,dilated_cardiomyopathy|familial_glucocorticoid_deficiency|familial_isolated_dilated_cardiomyopathy|glucocorticoid_deficiency_5,paroxysmal_dyskinesia,.,.,metabolic_encephalomyopathic_crises,_recurrent,_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration|recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,van_den_Ende-Gupta_syndrome,.,.,.,.,polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis,heparin_cofactor_2_deficiency,CEDNIK_syndrome,congenital_heart_disease,.,.,LZTR1-related_schwannomatosis|Noonan_syndrome|Noonan_syndrome_10|Noonan_syndrome_2|breast_cancer|schwannomatosis,.,.,.,myopathy,.,.,.,.,.;GenCC_moi=.,.,AR,.,.,.,AD,.,.,.,.,.,AD|AR,AD|AR,AD,.,.,.,.,AD|AR,AD,.,.,.,AD|AR,AD,.,.,AD|AR,AD,.,.,AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,AR,.,.,.,.,AR,AD,AR,.,.,.,AD|AR,.,.,.,AR,.,.,.,.,.;GenCC_classification=.,.,Definitive|Strong|Supportive,.,.,.,Limited,.,.,.,.,.,Definitive|Limited|Strong|Supportive,Limited|Supportive,Limited,.,.,.,.,Definitive|Strong|Supportive,Limited,.,.,.,Definitive|Strong|Supportive,Definitive|Strong|Supportive,.,.,Limited|Supportive,Moderate,.,.,Moderate|Strong,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Limited|Moderate|Strong|Supportive,.,.,.,.,Moderate|Strong,Definitive|Limited|Strong,Strong|Supportive,No_Known_Disease_Relationship,.,.,Definitive|Moderate|Strong|Supportive,.,.,.,Limited,.,.,.,.,.;GenCC_pmid=.,.,10192398|12217952|12525555|15662599|19736351|20524212|20524212[PMID]_23462603[PMID]|23462603|26978485|28202261|28851938|5031477,.,.,.,.,.,.,.,.,.,23561848|23561848[PMID]_23393310[PMID]|26273529|26870663|29238895|31527857|31808147|NULL,26068709[PMID],33417013,.,.,.,.,11416137|121376|149250|27374770|27374770[PMID]|282832|30986546,35714222|36477332,.,.,.,10887115|12447957|15213102|18825380|19484238|22886561[PMID]|23995613|28064200[PMID],11239417|11242049|11242110|11748311|14585638|14585638[PMID]|18636631|192430|20054531|20937753|24637876|24998776|25860641|29500247,.,.,21247928[PMID]|24601690[PMID]|30237576|32476818,.,.,.,26805781|26805782,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,20887961|20887961[PMID]_22140376[PMID]|22140376|23808541|24478002|3808541,.,.,.,.,25855803|29738522|30614210|34415310|34415322,15337701|2647747|277130|8562924,15968592|15968592[PMID]_21073448[PMID]|21073448|23231787|25473036|26747696,.,.,.,15955931|16534111|23401320|24362817|25335493|25480913|25795793|25795793[PMID]|26446362|274799|278971|287232|29469822|29959388|30368668|303983|30442762|30442766|30481304|30859559|31182298|37592023|37936555|38135892,.,.,.,.,.,.,.,.,.;NCBI_gene_ID=.,8214,5625,.,26220,117134596,9993,25786,8220,23617,2928,100652736,6576,8218,7290,64976,128977,105372860,7353,8318,7122,150185,5413,.,2812,6899,54584,79680,10587,1312,100616414,421,128989,406961,54487,100500860,100302197,27037,102465490,5902,109617010,29801,388849,284865,150197,65078,100302118,85359,653203,.,728226,728229,728233,85376,117134597,729461,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=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=21464119;SVLEN=-2569284	GT	1/.
X	53250654	.	G	<DUP>	.	PASS	AnnotSV_ID=X_53250654_53856257_DUP_1;SV_start=53250654;Biologist_annotation=HUWE1;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split;CytoBand=p11.22;Gene_name=KDM5C|IQSEC2|SMC1A|MIR6857|RIBC1|HSD17B10|HUWE1|MIR98|MIRLET7F2,KDM5C,IQSEC2,SMC1A,MIR6857,RIBC1,HSD17B10,HUWE1,MIR98,MIRLET7F2;Closest_left=MIR6894;Closest_right=PHF8;Gene_count=9;Tx=.,NM_001353979,NM_001111125,NM_006306,NR_106916,NM_001031745,NM_004493,NM_031407,NR_029513,NR_029484;Tx_version=.,2,3,4,1,5,3,7,1,1;Tx_start=.,53205458,53262057,53401069,53432604,53449821,53458208,53559056,53583183,53584152;Tx_end=.,53254389,53350548,53449603,53432697,53458063,53461317,53713664,53583302,53584235;Overlapped_tx_length=.,3736,88491,48534,93,8242,3109,154608,119,83;Overlapped_CDS_length=.,150,4467,3702,0,1140,786,13125,0,0;Overlapped_CDS_percent=.,3,100,100,0,100,100,100,0,0;Frameshift=.,no,no,no,.,no,no,no,.,.;Exon_count=.,26,15,25,1,8,6,84,1,1;Location=.,txStart-intron1,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,5'UTR-CDS,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR;Dist_nearest_SS=.,555,.,.,.,.,.,.,.,.;Nearest_SS_type=.,3',.,.,.,.,.,.,.,.;Intersect_start=.,53250653,53262057,53401069,53432604,53449821,53458208,53559056,53583183,53584152;Intersect_end=.,53254389,53350548,53449603,53432697,53458063,53461317,53713664,53583302,53584235;RE_gene=ACACA_(morbid/RE=mTL_miRNA)|ACADM_(morbid/RE=mTL_miRNA)|ACTA1_(morbid/RE=mTL_miRNA)|ACVR2B_(morbid/RE=mTL_miRNA)|ADA_(morbid/RE=mTL_miRNA)|ADGRE2_(morbid/RE=mTL_miRNA)|ADGRG1_(morbid/RE=mTL_miRNA)|ADH5_(morbid/RE=mTL_miRNA)|AGO1_(morbid/RE=mTL_miRNA)|AGPS_(morbid/RE=mTL_miRNA)|AHR_(morbid/RE=mTL_miRNA)|AK2_(morbid/RE=mTL_miRNA)|ALAS2_(morbid/RE=ABC_enhancer)|ALDH1A3_(morbid/RE=mTL_miRNA)|ALDH7A1_(morbid/RE=mTL_miRNA)|ALG3_(morbid/RE=mTL_miRNA)|ALG8_(morbid/RE=mTL_miRNA)|AMD1_(morbid/RE=mTL_miRNA)|AMMECR1_(morbid/RE=mTL_miRNA)|ANKRD11_(HI=3/morbid/RE=mTL_miRNA)|ANTXR2_(morbid/RE=mTL_miRNA)|AP1S1_(morbid/RE=mTL_miRNA)|ARCN1_(HI=3/morbid/RE=mTL_miRNA)|ARHGEF18_(morbid/RE=mTL_miRNA)|ARID1A_(HI=3/morbid/RE=mTL_miRNA)|ARID1B_(HI=3/morbid/RE=mTL_miRNA)|ARL6IP1_(morbid/RE=mTL_miRNA)|ASCC3_(morbid/RE=mTL_miRNA)|ATL1_(morbid/RE=mTL_miRNA)|ATP13A3_(morbid/RE=mTL_miRNA)|ATP2A2_(morbid/RE=mTL_miRNA)|ATP7B_(morbid/RE=mTL_miRNA)|ATR_(morbid/RE=mTL_miRNA)|ATXN2_(morbid/RE=mTL_miRNA)|B4GAT1_(morbid/RE=mTL_miRNA)|BACH1_(morbid/RE=mTL_miRNA)|BCL11A_(HI=3/morbid/RE=mTL_miRNA)|BCL2_(morbid/RE=mTL_miRNA)|BCOR_(HI=3/morbid/RE=mTL_miRNA)|BNC2_(morbid/RE=mTL_miRNA)|C12orf4_(morbid/RE=mTL_miRNA)|C3_(morbid/RE=mTL_miRNA)|CACNA1C_(morbid/RE=mTL_miRNA)|CACNB2_(morbid/RE=mTL_miRNA)|CALM1_(morbid/RE=mTL_miRNA)|CANT1_(morbid/RE=mTL_miRNA)|CAP1_(morbid/RE=mTL_miRNA)|CAPN15_(morbid/RE=mTL_miRNA)|CBL_(morbid/RE=mTL_miRNA)|CCND2_(morbid/RE=mTL_miRNA)...;P_gain_phen=Xp11.22_region_(includes_HUWE1);P_gain_source=TS3:ISCA-46299|dbVar:nssv15147941|dbVar:nssv15147942|dbVar:nssv15161312|nssv15161529|dbVar:nssv15161768,.,dbVar:nssv15147941|dbVar:nssv15147942,.,.,.,.,dbVar:nssv15161768,.,.;P_gain_coord=X:53276031-53298472|X:53283514-53325284|X:53363457-53793054|X:53559549-53622547|X:53559733-53790650,.,X:53276031-53298472|X:53283514-53325284,.,.,.,.,X:53559549-53622547,.,.;P_loss_phen=Cornelia_de_Lange_syndrome_2,_300590_(3)_XLD|Developmental_and_epileptic_encephalopathy_85,_with_or_without_midline_brain_defects,_301044_(3)_XLD|HSD10_mitochondrial_disease,_300438_(3)_XLD|Intellectual_developmental_disorder,_XL_1,_309530_(3)_XLD|Intellectual_developmental_disorder,_XL_syndromic,_Turner_type,_309590_(3)_XL|Intellectual_disability,_X-linked_1,.,Intellectual_developmental_disorder,_XL_1,_309530_(3)_XLD|Intellectual_disability,_X-linked_1,.,.,.,HSD10_mitochondrial_disease,_300438_(3)_XLD,Intellectual_developmental_disorder,_XL_syndromic,_Turner_type,_309590_(3)_XL,.,.;P_loss_source=CLN:1065452|HI3:IQSEC2|HI3:SMC1A|dbVar:nssv15769470|dbVar:nssv16212358|dbVar:nssv16215156|dbVar:nssv17171530|dbVar:nssv17171900|dbVar:nssv17172048|dbVar:nssv17172462|dbVar:nssv17970926|dbVar:nssv17971164|dbVar:nssv18788536|dbVar:nssv18791522|morbid:HSD17B10|morbid:HUWE1|morbid:IQSEC2|morbid:SMC1A,dbVar:nssv16215156,CLN:1065452|HI3:IQSEC2|dbVar:nssv17171900|dbVar:nssv17172048|dbVar:nssv17172462|dbVar:nssv17970926|dbVar:nssv18791522|morbid:IQSEC2,dbVar:nssv15769470|dbVar:nssv16212358|dbVar:nssv17171530|dbVar:nssv17971164|dbVar:nssv18788536,.,.,morbid:HSD17B10,morbid:HUWE1,.,.;P_loss_coord=X:53253923-53254071|X:53262059-53350548|X:53263402-53280376|X:53264077-53264258|X:53264078-53264257|X:53270947-53271111|X:53279442-53280376|X:53295510-53310766|X:53348888-53349736|X:53401070-53449677|X:53401071-53449677|X:53430479-53432101|X:53430479-53442138|X:53435974-53442138|X:53448826-53449569|X:53449432-53449549|X:53458209-53461317|X:53559057-53713664,X:53253923-53254071,X:53262059-53350548|X:53263402-53280376|X:53264077-53264258|X:53264078-53264257|X:53270947-53271111|X:53279442-53280376|X:53295510-53310766|X:53348888-53349736,X:53430479-53432101|X:53430479-53442138|X:53435974-53442138|X:53448826-53449569|X:53449432-53449549,.,.,X:53458209-53461317,X:53559057-53713664,.,.;P_snvindel_nb=277,6,136,118,.,.,4,13,.,.;P_snvindel_phen=Abnormal_heart_valve_morphology|Atypical_Rett_syndrome|Congenital_muscular_hypertrophy-cerebral_syndrome|Cornelia_de_Lange_syndrome_1|De_Lange_syndrome|Developmental_and_epileptic_encephalopathy,_85,_with_or_without_midline_brain_defects|Epileptic_encephalopathy|Global_developmental_delay|HSD10_mitochondrial_disease|HUWE1-related_disorder|Hirsutism|Hypertonia|Inborn_genetic_diseases|Intellectual_disability|Intellectual_disability,_X-linked_1|Intellectual_disability,_X-linked_syndromic,_Turner_type|Microcephaly|Neurodevelopmental_delay|Paraplegia-intellectual_disability-hyperkeratosis_syndrome|Progressive_sensorineural_hearing_impairment|SMC1A-related_cohesinopathy|SMC1A-related_disorder|See_cases|Seizure|Severe_intellectual_deficiency|Spastic_paraplegia|Syndromic_X-linked_intellectual_disability_Claes-Jensen_type|Undetermined_early-onset_epileptic_encephalopathy,Inborn_genetic_diseases|Spastic_paraplegia|Syndromic_X-linked_intellectual_disability_Claes-Jensen_type,Inborn_genetic_diseases|Intellectual_disability|Intellectual_disability,_X-linked_1|Neurodevelopmental_delay|Paraplegia-intellectual_disability-hyperkeratosis_syndrome|See_cases|Severe_intellectual_deficiency|Undetermined_early-onset_epileptic_encephalopathy,Abnormal_heart_valve_morphology|Atypical_Rett_syndrome|Congenital_muscular_hypertrophy-cerebral_syndrome|Cornelia_de_Lange_syndrome_1|De_Lange_syndrome|Developmental_and_epileptic_encephalopathy,_85,_with_or_without_midline_brain_defects|Epileptic_encephalopathy|Global_developmental_delay|Hirsutism|Hypertonia|Inborn_genetic_diseases|Intellectual_disability|Microcephaly|Progressive_sensorineural_hearing_impairment|SMC1A-related_cohesinopathy|SMC1A-related_disorder|See_cases|Seizure,.,.,HSD10_mitochondrial_disease,Global_developmental_delay|HUWE1-related_disorder|Inborn_genetic_diseases|Intellectual_disability|Intellectual_disability,_X-linked_syndromic,_Turner_type|Neurodevelopmental_delay,.,.;B_inv_source=IMH;B_inv_coord=X:46769178-84009828;B_inv_AFmax=0.128;po_B_loss_someG_source=chrX:53318184-53318333_dbVar|chrX:53319071-53320350_dbVar|chrX:53414007-53419436_dbVar|chrX:53475340-53498420_dbVar|X:53478094-53491686_1000g|X:53478191-53491588_IMH|X:53478192-53491585_gnomAD-SV_v2.1_DEL_X_186301|chrX:53481193-53482847_dbVar|chrX:53485000-53555000_dbVar|X:53496417-53499888_1000g|chrX:53504537-53504627_dbVar|chrX:53513549-53520809_dbVar|chrX:53520678-53520750_dbVar|chrX:53561861-53562148_dbVar|chrX:53684764-53684885_dbVar|X:53772345-53778301_1000g|X:53772358-53778316_IMH|chrX:53776500-53781600_dbVar|chrX:53781934-53808203_dbVar|X:53792164-53792218_1000g...;po_B_loss_someG_coord=chrX:53256067-53256435_dbVar|chrX:53318309-53320696_dbVar|X:53319072-53320350_1000g|chrX:53437409-53437467_dbVar|chrX:53478093-53491686_dbVar|X:53478160-53491616_DDD:57601|chrX:53478192-53491585_dbVar|chrX:53478817-53479165_dbVar|X:53481194-53482847_1000g|chrX:53496416-53499888_dbVar|chrX:53496418-53499890_dbVar|chrX:53513441-53520776_dbVar|chrX:53513576-53513640_dbVar|chrX:53557344-53558918_dbVar|chrX:53680158-53680957_dbVar|chrX:53772344-53778301_dbVar|X:53772358-53778316_DDD:57606|chrX:53774645-53775785_dbVar|X:53776864-53777371_nsv515204|chrX:53787125-53795624_dbVar...;GC_content_left=0.42;GC_content_right=0.295;Repeat_coord_left=X:53250479-53250649;Repeat_type_left=MIRc;Repeat_coord_right=X:53855851-53856180|X:53856303-53856465;Repeat_type_right=L1MA7|L1MA7;HI=3,3,3,3,.,.,0,0,.,.;TS=.,0,0,0,.,.,0,0,.,.;DDD_HI_percent=75.6,11.71,26.16,14.23,.,75.6,21.63,10.58,.,.;ExAC_synZ=0.807946261414963,-1.20041549946446,-0.257046228208263,-0.112682658348456,.,0.80408198011521,0.807946261414963,-1.65771922174252,.,.;ExAC_misZ=9.03470791370173,5.44441583895939,4.55717824142058,6.67845368195785,.,0.293719819544616,2.17074250392365,9.03470791370173,.,.;GenCC_disease=.,X-linked_syndromic_intellectual_disability|syndromic_X-linked_intellectual_disability_Claes-Jensen_type,X-linked_complex_neurodevelopmental_disorder|intellectual_disability,_X-linked_1|non-syndromic_X-linked_intellectual_disability|severe_intellectual_disability-progressive_postnatal_microcephaly-_midline_stereotypic_hand_movements_syndrome,Cornelia_de_Lange_syndrome|Cornelia_de_Lange_syndrome_2|X-linked_complex_neurodevelopmental_disorder|atypical_Rett_syndrome|developmental_and_epileptic_encephalopathy,_85,_with_or_without_midline_brain_defects,.,.,HSD10_disease,_infantile_type|HSD10_disease,_neonatal_type|HSD10_mitochondrial_disease|syndromic_X-linked_intellectual_disability_type_10,intellectual_disability,_X-linked_syndromic,_Turner_type|non-syndromic_X-linked_intellectual_disability|syndromic_intellectual_disability,.,.;GenCC_moi=.,XL,XL,AD|XL,.,.,XL,AD|XL,.,.;GenCC_classification=.,Definitive|Strong|Supportive,Definitive|Strong|Supportive,Definitive|Strong|Supportive,.,.,Definitive|Strong|Supportive,Definitive|Strong|Supportive,.,.;GenCC_pmid=.,15586325|15586325[PMID]|18697827|21575681|22326837|25666439|32279304,20473311[PMID]|21686261|23674175[PMID]|24306141|25167861|26544041|26793055|27665735|300522|30206421,20301283[PMID]|26358754|26386245|27334371|28166369|28548707|31334757|32222533[PMID],.,.,22127393|22127393[PMID],18252223|19377476|1968668|20231446|22840365|24303071|25644381|25985138|27418510|27615324|29180823|29180823[PMID],.,.;NCBI_gene_ID=.,8242,23096,8243,102465516,158787,3028,10075,407054,406889;HGNC_gene_ID=.,HGNC:11114,HGNC:29059,HGNC:11111,HGNC:50263,HGNC:26537,HGNC:4800,HGNC:30892,HGNC:31649,HGNC:31484;OMIM_ID=314690|300522|300040|300256|300697,314690,300522,300040,.,.,300256,300697,.,.;OMIM_phenotype=.,Intellectual_developmental_disorder,_XL_syndromic,_Claes-Jensen_type,_300534_(3)_XLR,Intellectual_developmental_disorder,_XL_1,_309530_(3)_XLD,Cornelia_de_Lange_syndrome_2,_300590_(3)_XLD|Developmental_and_epileptic_encephalopathy_85,_with_or_without_midline_brain_defects,_301044_(3)_XLD,.,.,HSD10_mitochondrial_disease,_300438_(3)_XLD,Intellectual_developmental_disorder,_XL_syndromic,_Turner_type,_309590_(3)_XL,.,.;OMIM_inheritance=.,XLR,XLD,XLD,.,.,XLD,XL,.,.;OMIM_morbid=yes,yes,yes,yes,.,.,yes,yes,.,.;LOEUF_bin=0,0,0,0,.,1,1,0,.,.;GnomAD_pLI=1,1,0.99998,1,.,0.983,0.93604,1,.,.;ExAC_pLI=1,0.99784,0.97539,0.99999,.,0.96626,0.88687,1,.,.;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_gain_source,_+1.00)|2H-2_(HSD17B10/HUWE1/IQSEC2/SMC1A,_+0.00)|2J_(KDM5C,_+0.00)|3A_(9_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=53856257;SVLEN=605604	GT	1/.


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FILE: share/doc/AnnotSV/Example/test1.bed
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# chrom	Start	End	Variant_type	Biologist_annotation	Biologist_ranking
1	149041933	149209289	DEL		Benign
1	196756231	196799302	DEL		Benign
1	248738898	248785562	DEL		Benign
2	242865920	243028452	DEL		Benign
3	62939217	65268743	DEL	VOUS in 2017, reclassified in 2020	Pathogenic
3	97483033	97487074	DEL	BBS3/ARL6 promotor overlapped	Pathogenic
3	195419168	195472855	DEL		Benign
4	71552	9371067	DEL	4p- syndrom	Pathogenic
4	69392545	69462438	DEL		Benign
5	723194	777000	DUP		Benign
5	88774328	91802402	DEL	TAD MEF2C	Pathogenic
6	266079	362290	DEL		Benign
6	29854870	29896710	DEL		Benign
6	78979172	79023328	DEL		Benign
7	33397467	33397607	DEL	BBS9 inframe	Pathogenic
7	38296176	38352444	DEL		Benign
7	72726578	74139390	DEL	Williams syndrom	Pathogenic
8	7169490	7753583	DUP		Benign
8	7169490	7753583	DEL		Benign
8	56986129	57169684	DEL	VOUS in 2017, reclassified in 2020	Pathogenic
8	141035363	141061798	DEL	DI AR	Pathogenic
10	46976157	47590995	DUP		Benign
11	66287088	66288847	DEL	BBS1 internal frameshift	Pathogenic
12	63935481	64130626	DEL	DPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)	Pathogenic
12	63935481	64130626	DUP	DPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)	Pathogenic
14	22323879	22952279	DEL		Benign
14	74001651	74022324	DEL		Benign
14	107152092	107180095	DEL		Benign
15	20432851	22765687	DUP		Benign
15	20564608	22409391	DEL		Benign
15	34735949	34806953	DEL		Benign
16	1565629	1571297	DUP	IFT140 tandem duplication 	Pathogenic
16	31955076	34702366	DUP		Benign
16	32471625	33487672	DEL		Benign
16	33371443	34285848	DUP		Benign
16	34493206	34702366	DUP		Benign
17	14100118	15442066	DUP	PMP22 (CMT1A)	Pathogenic
17	34437475	34817481	DUP		Benign
17	44171888	44297143	DUP		Benign
22	18894835	21464119	DEL	Di George syndrom	Pathogenic
X	53250653	53856257	DUP	HUWE1	Pathogenic


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FILE: share/doc/AnnotSV/Example/test2.annotated.tsv
================================================
AnnotSV_ID	SV_chrom	SV_start	SV_end	SV_length	SV_type	Samples_ID	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample1	sample2	Annotation_mode	CytoBand	Gene_name	Closest_left	Closest_right	Gene_count	Tx	Tx_version	Tx_start	Tx_end	Overlapped_tx_length	Overlapped_CDS_length	Overlapped_CDS_percent	Frameshift	Exon_count	Location	Location2	Dist_nearest_SS	Nearest_SS_type	Intersect_start	Intersect_end	RE_gene	P_gain_phen	P_gain_hpo	P_gain_source	P_gain_coord	P_loss_phen	P_loss_hpo	P_loss_source	P_loss_coord	P_ins_phen	P_ins_hpo	P_ins_source	P_ins_coord	po_P_gain_phen	po_P_gain_hpo	po_P_gain_source	po_P_gain_coord	po_P_gain_percent	po_P_loss_phen	po_P_loss_hpo	po_P_loss_source	po_P_loss_coord	po_P_loss_percent	P_snvindel_nb	P_snvindel_phen	B_gain_source	B_gain_coord	B_gain_AFmax	B_loss_source	B_loss_coord	B_loss_AFmax	B_ins_source	B_ins_coord	B_ins_AFmax	B_inv_source	B_inv_coord	B_inv_AFmax	po_B_gain_allG_source	po_B_gain_allG_coord	po_B_gain_someG_source	po_B_gain_someG_coord	po_B_loss_allG_source	po_B_loss_allG_coord	po_B_loss_someG_source	po_B_loss_someG_coord	GC_content_left	GC_content_right	Repeat_coord_left	Repeat_type_left	Repeat_coord_right	Repeat_type_right	Gap_left	Gap_right	SegDup_left	SegDup_right	ENCODE_blacklist_left	ENCODE_blacklist_characteristics_left	ENCODE_blacklist_right	ENCODE_blacklist_characteristics_right	ACMG	HI	TS	DDD_HI_percent	ExAC_delZ	ExAC_dupZ	ExAC_cnvZ	ExAC_synZ	ExAC_misZ	GenCC_disease	GenCC_moi	GenCC_classification	GenCC_pmid	NCBI_gene_ID	HGNC_gene_ID	OMIM_ID	OMIM_phenotype	OMIM_inheritance	OMIM_morbid	OMIM_morbid_candidate	LOEUF_bin	GnomAD_pLI	ExAC_pLI	AnnotSV_ranking_score	AnnotSV_ranking_criteria	ACMG_class
1_14110160_14110400_DUP_1	1	14110160	14110400	240	DUP	sample1,sample2	.	G	<DUP:TANDEM>	999	PASS	END=14110400	GT	0/1	0/1	full	p36.21	PRDM2	PDPN	KAZN-AS1	1																															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15148982;dbVar:nssv15128051;dbVar:nssv17976696;dbVar:nssv15147542;dbVar:nssv15145882;dbVar:nssv15133500	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:6614946-16382506;1:8990091-16518045;1:10175556-16609644;1:11081809-15563167;1:12687422-14320473;1:13946475-18792666	0.00;0.00;0.00;0.00;0.00;0.00;0.01;0.01;0.00			dbVar:nssv15147705;dbVar:nssv17956141;dbVar:nssv15147183;dbVar:nssv18792748;dbVar:nssv15148223;dbVar:nssv15148835;dbVar:nssv18330519;dbVar:nssv15151350;dbVar:nssv15146487;dbVar:nssv15145965;dbVar:nssv15145980;dbVar:nssv15127569;dbVar:nssv15147187;dbVar:nssv15151873;dbVar:nssv15146553;dbVar:nssv15146554;dbVar:nssv15145869;dbVar:nssv15136410	1:746609-15077159;1:849467-17525065;1:2922758-18015429;1:4481272-20530242;1:5423887-18686796;1:6363702-16125588;1:6758934-19287770;1:8850515-16272383;1:9094731-16767960;1:9488598-16142286;1:10324456-16107335;1:10448140-16107331;1:10681834-16847204;1:10722726-14267773;1:10869097-16748995;1:11181683-16650993;1:12784753-16361283;1:13727392-15683440	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.01;0.00;0.00;0.01;0.01												IMH	1:4599855-170869838;1:6507276-17027937;1:6515330-17019897;1:7662178-50846966	0.3010									0.395	0.445	1:14109929-14110078	MIR3														40.49	0.415153458557427	0.373434796722033	0.547664002453622	-1.78317179376506	0.436072998472952												0	9.9996e-01	9.9504e-01	0.0	1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2L (PRDM2, +0.00);3A (1 gene, +0.00);5F (+0.00)	3
1_14110160_14110400_DUP_1	1	14110160	14110400	240	DUP	sample1,sample2	.	G	<DUP:TANDEM>	999	PASS	END=14110400	GT	0/1	0/1	split	p36.21	PRDM2				NM_001135610	2	14026682	14151574	241	0	0	NA	8	intron6-intron6	CDS	32521	3'	14110159	14110400																																			IMH	1:4599855-170869838;1:6507276-17027937;1:6515330-17019897;1:7662178-50846966	0.3010																										40.49	0.415153458557427	0.373434796722033	0.547664002453622	-1.78317179376506	0.436072998472952					7799	HGNC:9347						0	9.9996e-01	9.9504e-01			full=3
2_110138404_110222824_DEL_1	2	110138404	110222824	-84420	DEL	sample1,sample2	.	T	<DEL>	.	.	END=110222824	GT	0/1	0/1	full	q12.3-q13	SH3RF3	MIR4266	SEPTIN10	1																															dbVar:nssv17976961;dbVar:nssv15161685;nssv15161863;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv15148156;dbVar:nssv15152720;dbVar:nssv15147149;dbVar:nssv15147463;dbVar:nssv15151697	2:2-243199373;2:12772-242783384;2:14239-243048760;2:15673-243101834;2:95344258-111359986;2:96353031-114045463;2:98288986-110968895;2:102327288-111548995;2:107096424-112235727	0.03;0.03;0.03;0.03;0.53;0.48;0.67;0.92;1.64			dbVar:nssv18326420;dbVar:nssv15155128;dbVar:nssv15124851;dbVar:nssv15146967;dbVar:nssv15152708;dbVar:nssv16254438;dbVar:nssv17969746;dbVar:nssv16207824;dbVar:nssv17977078;dbVar:nssv15119790;dbVar:nssv15152686;dbVar:nssv15605770;dbVar:nssv15147710;dbVar:nssv15147572	2:11504319-111365996;2:40607043-146902764;2:50886433-243102476;2:106423311-115054828;2:107020783-111365996;2:107029681-113187742;2:108446956-110504318;2:108499810-110504318;2:109157563-110497991;2:109195458-110494136;2:109295036-110504318;2:109301075-110482930;2:109556628-117570152;2:109798248-125658380	0.08;0.08;0.04;0.98;1.94;1.37;4.10;4.21;6.30;6.50;6.98;7.14;1.05;0.53												IMH	2:26280501-162970618;2:87141173-111334517;2:87428138-112522401;2:87449271-112501273;2:87515690-112330711;2:87531266-112315176;2:106984840-112624021	0.3294									0.000 (200 N)	0.000 (200 N)					2:110109338-110251337	2:110109338-110251337										65.25				-0.881765523739939	0.150060065037892												2	2.8368e-02	9.8110e-01	0.0	1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)	3
2_110138404_110222824_DEL_1	2	110138404	110222824	-84420	DEL	sample1,sample2	.	T	<DEL>	.	.	END=110222824	GT	0/1	0/1	split	q12.3-q13	SH3RF3				NM_001099289	3	109745660	110262211	84421	0	0	NA	10	intron9-intron9	CDS	31011	5'	110138403	110222824																																			IMH	2:26280501-162970618;2:87141173-111334517;2:87428138-112522401;2:87449271-112501273;2:87515690-112330711;2:87531266-112315176;2:106984840-112624021	0.3294																										65.25				-0.881765523739939	0.150060065037892					344558	HGNC:24699						2	2.8368e-02	9.8110e-01			full=3
5_80251899_80261899_INS_1	5	80251899	80261899		INS	sample1,sample2	.	T	<INS>	999	PASS	END=80261899	GT	1/1	0/1	full	q14.1	RASGRF2-AS1;RASGRF2	MSH3	CKMT2	2																DHFR (morbid/RE=GH_enhancer+GH_promoter_enhancer)															dbVar:nssv15164761;dbVar:nssv15164765;dbVar:nssv15151111;nssv15151221;dbVar:nssv16206767;dbVar:nssv15120567	5:13649-180905029;5:25329-180693344;5:113578-180719789;5:72790062-97478870;5:73459012-110145153	0.01;0.01;0.01;0.04;0.03			dbVar:nssv15151179	5:17628742-176575720	0.01												IMH	5:24758285-101693420;5:28691217-97582419	0.2263								chr5:80248529-80253459 dbVar	0.450	0.330	5:80251821-80252359	MER41A	5:80261899-80261940	(TG)n												32.53	1.25977458409673	0.206923040395808	0.647601778097669	0.973590350721445	3.58412504045464												1	1.5243e-01	9.9874e-01			NA
5_80251899_80261899_INS_1	5	80251899	80261899		INS	sample1,sample2	.	T	<INS>	999	PASS	END=80261899	GT	1/1	0/1	split	q14.1	RASGRF2-AS1				NR_105015	1	80243511	80256726	4828	0	0	NA	4	txStart-intron1	UTR	4599	3'	80251898	80256726																																			IMH	5:24758285-101693420;5:28691217-97582419	0.2263																																				102524628	HGNC:40499											full=NA
5_80251899_80261899_INS_1	5	80251899	80261899		INS	sample1,sample2	.	T	<INS>	999	PASS	END=80261899	GT	1/1	0/1	split	q14.1	RASGRF2				NM_006909	3	80256181	80525981	5718	288	7	NA	27	txStart-intron1	5'UTR-CDS	5054	5'	80256181	80261899																																			IMH	5:24758285-101693420;5:28691217-97582419	0.2263																										32.53	1.25977458409673	0.206923040395808	0.647601778097669	0.973590350721445	3.58412504045464					5924	HGNC:9876						1	1.5243e-01	9.9874e-01			full=NA


================================================
FILE: share/doc/AnnotSV/Example/test2.annotated.variantconvert.log
================================================
python3 /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert//src/variantconvert convert -i /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test2.annotated.tsv -o /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test2.annotated.vcf -c /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert//src/variantconvert/configs/GRCh37/annotsv3_from_vcf.combined.local.json

2026-04-14 12:03:51 [INFO] running variantconvert 2.0.1
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[240.0 240.0 -84420.0 -84420.0 '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[1.0 '.' 1.0 '.' 2.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 2.0 '.' 3.0 '.' 1.0 3.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 14026682.0 '.' 109745660.0 '.' 80243511.0 80256181.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 14151574.0 '.' 110262211.0 '.' 80256726.0 80525981.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 241.0 '.' 84421.0 '.' 4828.0 5718.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 0.0 '.' 0.0 '.' 0.0 288.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 0.0 '.' 0.0 '.' 0.0 7.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 8.0 '.' 10.0 '.' 4.0 27.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 32521.0 '.' 31011.0 '.' 4599.0 5054.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 14110159.0 '.' 110138403.0 '.' 80251898.0 80256181.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 14110400.0 '.' 110222824.0 '.' 80256726.0 80261899.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[40.49 40.49 65.25 65.25 32.53 '.' 32.53]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.415153458557427 0.415153458557427 '.' '.' 1.25977458409673 '.'
 1.25977458409673]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.373434796722033 0.373434796722033 '.' '.' 0.206923040395808 '.'
 0.206923040395808]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.547664002453622 0.547664002453622 '.' '.' 0.647601778097669 '.'
 0.647601778097669]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[-1.78317179376506 -1.78317179376506 -0.881765523739939 -0.881765523739939
 0.973590350721445 '.' 0.973590350721445]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.436072998472952 0.436072998472952 0.150060065037892 0.150060065037892
 3.58412504045464 '.' 3.58412504045464]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 7799.0 '.' 344558.0 '.' 102524628.0 5924.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.0 0.0 2.0 2.0 1.0 '.' 1.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.99996 0.99996 0.028368 0.028368 0.15243 '.' 0.15243]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.99504 0.99504 0.9811 0.9811 0.99874 '.' 0.99874]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.0 '.' 0.0 '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.
  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(".")
2026-04-14 12:03:51 [INFO] variantconvert finished.


================================================
FILE: share/doc/AnnotSV/Example/test2.annotated.vcf
================================================
##fileformat=VCFv4.2
##fileDate=14/04/2026
##inputFile=/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test2.annotated.tsv
##source=variantconvert from AnnotSV
##variantconvertVersion=2.0.1
##variantconvertMode=combined
##FILTER=<ID=PASS,Description="Passed filter">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=DEL,Description="Deletion">
##INFO=<ID=AnnotSV_ID,Number=1,Type=String,Description="AnnotSV ID">
##INFO=<ID=SV_chrom,Number=1,Type=String,Description="Name of the chromosome">
##INFO=<ID=SV_start,Number=1,Type=Integer,Description="Starting position of the SV in the chromosome">
##INFO=<ID=END,Number=1,Type=Integer,Description="Ending position of the SV in the chromosome">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Length of the SV (bp) (deletions have negative values)">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of the SV (DEL, DUP, ...)">
##INFO=<ID=Samples_ID,Number=1,Type=String,Description="List of the samples ID for which the SV was called (according to the SV input file)">
##INFO=<ID=REF,Number=1,Type=String,Description="Nucleotide sequence in the reference genome (extracted only from a VCF input file)">
##INFO=<ID=ALT,Number=1,Type=String,Description="Alternate nucleotide sequence (extracted only from a VCF input file)">
##INFO=<ID='SampleID',Number=1,Type=String,Description="The sample ID column from a VCF file">
##INFO=<ID=Annotation_mode,Number=1,Type=String,Description="Indicate the type of annotation lines generated: annotation on the SV full length ('full'), annotation on each gene overlapped by the SV ('split')">
##INFO=<ID=Gene_name,Number=.,Type=String,Description="Gene symbol">
##INFO=<ID=Gene_count,Number=1,Type=Integer,Description="Number of overlapped genes with the SV">
##INFO=<ID=Tx,Number=1,Type=String,Description="Transcript symbol">
##INFO=<ID=Tx_start,Number=1,Type=Integer,Description="Starting position of the transcript">
##INFO=<ID=Tx_end,Number=1,Type=Integer,Description="Ending position of the transcript">
##INFO=<ID=Overlapped_tx_length,Number=1,Type=Integer,Description="Length of the transcript (bp) overlapping with the SV">
##INFO=<ID=Overlapped_CDS_length,Number=1,Type=Integer,Description="Length of the CoDing Sequence (CDS) (bp) overlapped with the SV">
##INFO=<ID=Overlapped_CDS_percent,Number=1,Type=Integer,Description="Percent of the CoDing Sequence (CDS) (bp) overlapped with the SV">
##INFO=<ID=Frameshift,Number=1,Type=String,Description="Indicates if the CDS length is not divisible by three (yes or no)">
##INFO=<ID=Exon_count,Number=1,Type=Integer,Description="Number of exons of the transcript">
##INFO=<ID=Location,Number=1,Type=String,Description="SV location in the gene's. Values: txStart, txEnd, exon'i', intron'i' e.g. txStart-exon3">
##INFO=<ID=Location2,Number=1,Type=String,Description="SV location in the gene's coding regions. Values: UTR (no CDS in the gene), 5'UTR (before the CDS start), 3'UTR (after the CDS end), CDS (between the CDS start and the CDS end, can be in an exon or an intron). e.g. 3'UTR-CDS">
##INFO=<ID=Dist_nearest_SS,Number=1,Type=Integer,Description="Absolute distance to nearest splice site after considering exonic and intronic SV breakpoints">
##INFO=<ID=Nearest_SS_type,Number=1,Type=String,Description="Nearest splice site type: 5' (donor) or 3' (acceptor)">
##INFO=<ID=Intersect_start,Number=1,Type=Integer,Description="Start position of the intersection between the SV and a transcript">
##INFO=<ID=Intersect_end,Number=1,Type=Integer,Description="End position of the intersection between the SV and a transcript">
##INFO=<ID=RE_gene,Number=1,Type=String,Description="Name of the genes regulated by a regulatory element overlapped with the SV to annotate. When available, the regulated gene name is detailed with associated haploinsufficiency (HI), triplosensitivity (TS), Exomiser (EX) scores, OMIM and candidate genes. (For the filtering output, see the -REselect1 and -REselect2 options)">
##INFO=<ID=B_gain_source,Number=1,Type=String,Description="Origin of the benign gain genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), ClinGen (TS40), DGV (dgv, nsv or esv), DDD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)">
##INFO=<ID=B_gain_coord,Number=1,Type=String,Description="Coordinates of the benign gain genomic regions completely overlapping the SV to annotate">
##INFO=<ID=B_gain_AFmax,Number=1,Type=Float,Description="Maximum allele frequency of the reported benign gain genomic regions (if available)">
##INFO=<ID=B_loss_source,Number=1,Type=String,Description="Origin of the benign loss genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), ClinGen (HI40), DGV (dgv, nsv or esv), DDD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)">
##INFO=<ID=B_loss_coord,Number=1,Type=String,Description="Coordinates of the benign loss genomic regions completely overlapping the SV to annotate">
##INFO=<ID=B_loss_AFmax,Number=1,Type=Float,Description="Maximum allele frequency of the reported benign loss genomic regions (if available)">
##INFO=<ID=B_ins_source,Number=1,Type=String,Description="Origin of the benign insertion genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)">
##INFO=<ID=B_ins_coord,Number=1,Type=String,Description="Coordinates of the benign insertion genomic regions completely overlapping the SV to annotate">
##INFO=<ID=B_ins_AFmax,Number=1,Type=Float,Description="Maximum allele frequency of the reported benign insertion genomic regions (if available)">
##INFO=<ID=B_inv_source,Number=1,Type=String,Description="Origin of the benign inversion genomic regions completely overlapping the SV to annotate: gnomAD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)">
##INFO=<ID=B_inv_coord,Number=1,Type=String,Description="Coordinates of the benign inversion genomic regions completely overlapping the SV to annotate">
##INFO=<ID=B_inv_AFmax,Number=1,Type=Float,Description="Maximum allele frequency of the reported benign inversion genomic regions (if available)">
##INFO=<ID=P_gain_phen,Number=1,Type=String,Description="Phenotype of the pathogenic gain genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_gain_hpo,Number=1,Type=String,Description="HPO terms describing the pathogenic gain genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_gain_source,Number=1,Type=String,Description="Origin of the pathogenic gain genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN), ClinGen (TS3)">
##INFO=<ID=P_gain_coord,Number=1,Type=String,Description="Coordinates of the pathogenic gain genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_loss_phen,Number=1,Type=String,Description="Phenotype of the pathogenic loss genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_loss_hpo,Number=1,Type=String,Description="HPO terms describing the pathogenic loss genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_loss_source,Number=1,Type=String,Description="Origin of the pathogenic loss genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN), ClinGen (HI3), morbid">
##INFO=<ID=P_loss_coord,Number=1,Type=String,Description="Coordinates of the pathogenic loss genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_ins_phen,Number=1,Type=String,Description="Phenotype of the pathogenic insertion genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_ins_hpo,Number=1,Type=String,Description="HPO terms describing the pathogenic insertion genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_ins_source,Number=1,Type=String,Description="Origin of the pathogenic insertion genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN)">
##INFO=<ID=P_ins_coord,Number=1,Type=String,Description="Coordinates of the pathogenic insertion genomic regions completely overlapped with the SV to annotate">
##INFO=<ID=P_snvindel_nb,Number=1,Type=Integer,Description="Number of pathogenic snv/indel from public databases completely overlapped with the SV to annotate">
##INFO=<ID=P_snvindel_phen,Number=1,Type=String,Description="Phenotypes of pathogenic snv/indel from public databases completely overlapped with the SV to annotate">
##INFO=<ID=TAD_coordinate,Number=1,Type=String,Description="Coordinates of the TAD whose boundaries overlapped with the annotated SV (boundaries included in the coordinates)">
##INFO=<ID=ENCODE_experiment,Number=1,Type=String,Description="ENCODE experiments used to define the TAD">
##INFO=<ID=Cosmic_ID,Number=1,Type=String,Description="COSMIC identifier">
##INFO=<ID=Cosmic_mut_typ,Number=1,Type=String,Description="Defined as Gain or Loss">
##INFO=<ID=CytoBand,Number=1,Type=String,Description="Cytogenic band annotation">
##INFO=<ID=GC_content_left,Number=1,Type=Float,Description="GC content around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=GC_content_right,Number=1,Type=Float,Description="GC content around the right SV breakpoint (+/- 100bp)">
##INFO=<ID=Repeat_coord_left,Number=1,Type=String,Description="Repeats coordinates around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=Repeat_type_left,Number=1,Type=String,Description="Repeats type around the left SV breakpoint (+/- 100bp) e.g. AluSp, L2b, L1PA2, LTR12C, SVA_D, ...">
##INFO=<ID=Repeat_coord_right,Number=1,Type=String,Description="Repeats coordinates around the right SV breakpoint (+/- 100bp)">
##INFO=<ID=Repeat_type_right,Number=1,Type=String,Description="Repeats type around the right SV breakpoint (+/- 100bp) e.g. AluSp, L2b, L1PA2, LTR12C, SVA_D, ...">
##INFO=<ID=Gap_left,Number=1,Type=String,Description="Gap regions coordinates around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=Gap_right,Number=1,Type=String,Description="Gap regions coordinates around the right SV breakpoint (+/-100bp)">
##INFO=<ID=SegDup_left,Number=1,Type=String,Description="Segmental Duplication regions coordinates around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=SegDup_right,Number=1,Type=String,Description="Segmental Duplication regions coordinates around the right SV breakpoint (+/- 100bp)">
##INFO=<ID=ENCODE_blacklist_left,Number=1,Type=String,Description="ENCODE blacklist regions coordinates around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=ENCODE_blacklist_characteristics_left,Number=1,Type=String,Description="ENCODE blacklist regions characteristics around the left SV breakpoint (+/- 100bp)">
##INFO=<ID=ENCODE_blacklist_right,Number=1,Type=String,Description="ENCODE blacklist regions coordinates around the right SV breakpoint (+/- 100bp)">
##INFO=<ID=ENCODE_blacklist_characteristics_right,Number=1,Type=String,Description="ENCODE blacklist regions characteristics around the right SV breakpoint (+/- 100bp)">
##INFO=<ID=ACMG,Number=1,Type=String,Description="ACMG genes">
##INFO=<ID=HI,Number=1,Type=Integer,Description="ClinGen Haploinsufficiency Score">
##INFO=<ID=TS,Number=1,Type=Float,Description="ClinGen Triplosensitivity Score">
##INFO=<ID=DDD_HI_percent,Number=1,Type=Float,Description="Haploinsufficiency ranks from DDD">
##INFO=<ID=GenCC_disease,Number=1,Type=String,Description="GenCC disease name: e.g. Nizon-Isidor syndrome">
##INFO=<ID=GenCC_moi,Number=1,Type=String,Description="GenCC mode of inheritance">
##INFO=<ID=GenCC_classification,Number=1,Type=String,Description="GenCC classification (Definitive, Strong, Moderate, Limited, Disputed, Animal Model Only, Refuted or No known disease relationship)">
##INFO=<ID=GenCC_pmid,Number=1,Type=String,Description="GenCC Pubmed Id">
##INFO=<ID=DDD_status,Number=1,Type=String,Description="DDD status: e.g. confirmed, probable">
##INFO=<ID=DDD_mode,Number=1,Type=String,Description="DDD allelic requirement: e.g. biallelic, hemizygous...">
##INFO=<ID=DDD_consequence,Number=1,Type=String,Description="DDD mutation consequence: e.g. 'loss of function', uncertain ...">
##INFO=<ID=DDD_disease,Number=1,Type=String,Description="DDD disease name: e.g. 'OCULOAURICULAR SYNDROME'">
##INFO=<ID=DDD_pmid,Number=1,Type=String,Description="DDD Pubmed Id">
##INFO=<ID=ExAC_synZ,Number=1,Type=Float,Description="Positive synZ_ExAC (Z score) from ExAC indicate gene intolerance to synonymous variation">
##INFO=<ID=ExAC_misZ,Number=1,Type=Float,Description="Positive misZ_ExAC (Z score) from ExAC indicate gene intolerance to missense variation">
##INFO=<ID=ExAC_delZ,Number=1,Type=Float,Description="Positive delZ_ExAC (Z score) from ExAC indicate gene intolerance to deletion">
##INFO=<ID=ExAC_dupZ,Number=1,Type=Float,Description="Positive dupZ_ExAC (Z score) from ExAC indicate gene intolerance to duplication">
##INFO=<ID=ExAC_cnvZ,Number=1,Type=Float,Description="Positive cnvZ_ExAC (Z score) from ExAC indicate gene intolerance to CNV">
##INFO=<ID=OMIM_ID,Number=1,Type=String,Description="OMIM unique six-digit identifier">
##INFO=<ID=OMIM_phenotype,Number=1,Type=String,Description="e.g. Charcot-Marie-Tooth disease">
##INFO=<ID=OMIM_inheritance,Number=1,Type=String,Description="e.g. AD (= 'Autosomal dominant'). Detailed in AnnotSV's FAQ.">
##INFO=<ID=OMIM_morbid,Number=1,Type=String,Description="Set to 'yes' if the SV overlaps an OMIM morbid gene">
##INFO=<ID=OMIM_morbid_candidate,Number=1,Type=String,Description="Set to 'yes' if the SV overlaps an OMIM morbid gene candidate">
##INFO=<ID=LOEUF_bin,Number=1,Type=Integer,Description="Minimal 'decile bin of LOEUF' for given transcripts of a gene (lower values indicate more constrained). Values = integer [0-9]">
##INFO=<ID=GnomAD_pLI,Number=1,Type=Float,Description="Score computed by gnomAD indicating the probability that a gene is intolerant to a loss of function variation (Nonsense, splice acceptor/donor variants due to SNV/indel)">
##INFO=<ID=ExAC_pLI,Number=1,Type=Float,Description="Score computed by ExAC indicating the probability that a gene is intolerant to a loss of function variation (Nonsense, splice acceptor/donor variants due to SNV/indel). ExAC considers pLI>=0.9 as an extremely LoF intolerant gene">
##INFO=<ID=Exomiser_gene_pheno_score,Number=1,Type=Float,Description="Exomiser score for how close each overlapped gene is to the phenotype">
##INFO=<ID=Human_pheno_evidence,Number=1,Type=String,Description="Phenotypic evidence from Human model">
##INFO=<ID=Mouse_pheno_evidence,Number=1,Type=String,Description="Phenotypic evidence from Mouse model">
##INFO=<ID=Fish_pheno_evidence,Number=1,Type=String,Description="Phenotypic evidence from Fish model">
##INFO=<ID=Compound_htz(sample),Number=1,Type=String,Description="List of heterozygous SNV/indel (reported with 'chrom_position') presents in the gene overlapped by the annotated SV">
##INFO=<ID=Count_hom(sample),Number=1,Type=Integer,Description="Number of homozygous SNV/indel (extracted from VCF input file) in the individual 'sample' which are present: 1) in the deletion SV ('full' annotation) and 2) between intersectStart and intersectEnd ('split' annotation)">
##INFO=<ID=Count_htz(sample),Number=1,Type=Integer,Description="Number of heterozygous SNV/indel (extracted from VCF input file) in the individual 'sample' which are present: 1) in the SV ('full' annotation) and 2) between intersectStart and intersectEnd ('split' annotation)">
##INFO=<ID=Count_htz/allHom(sample),Number=1,Type=Float,Description="Ratio for QC filtering: #htz(sample)/#allHom(sample)">
##INFO=<ID=Count_htz/total(cohort),Number=1,Type=Float,Description="Ratio for QC filtering: #htz(sample)/#total(cohort)">
##INFO=<ID=Count_total(cohort),Number=1,Type=Integer,Description="Total count of SNV/indel called from all the samples of the cohort and present in the interval of the deletion">
##INFO=<ID=AnnotSV_ranking_score,Number=1,Type=Float,Description="SV ranking score following the 2019 joint consensus recommendation of ACMG and ClinGen. Scoring: pathogenic >= 0.99, likely pathogenic [0.90;0.98], variant of uncertain significance [0.89;-0.89], likely benign [-0.90;-0.98], benign <= -0.99.">
##INFO=<ID=AnnotSV_ranking_criteria,Number=1,Type=String,Description="Decision criteria explaining the AnnotSV ranking score">
##INFO=<ID=ACMG_class,Number=1,Type=String,Description="SV ranking class into 1 of 5: class 1 (benign), class 2 (likely benign), class 3 (variant of unknown significance), class 4 (likely pathogenic), class 5 (pathogenic)">
##INFO=<ID=INFO,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=Closest_left,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=Closest_right,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=Tx_version,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_gain_phen,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_gain_hpo,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_gain_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_gain_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_gain_percent,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_loss_phen,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_loss_hpo,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_loss_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_loss_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_P_loss_percent,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_gain_allG_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_gain_allG_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_gain_someG_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_gain_someG_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_loss_allG_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_loss_allG_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_loss_someG_source,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=po_B_loss_someG_coord,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=NCBI_gene_ID,Number=.,Type=String,Description="Imported from AnnotSV">
##INFO=<ID=HGNC_gene_ID,Number=.,Type=String,Description="Imported from AnnotSV">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=RE,Number=1,Type=Integer,Description="Reads Expected: the number of expected reads under the probabilistic model (Decon)">
##FORMAT=<ID=RO,Number=1,Type=Integer,Description="Reads observed: the number of observed reads (Decon)">
##FORMAT=<ID=RR,Number=1,Type=Float,Description="Reads ratio: the ratio of observed to expected reads (Decon)">
##FORMAT=<ID=NC,Number=1,Type=Integer,Description="N.comp: the number of samples used as the reference set (Decon)">
##FORMAT=<ID=CO,Number=1,Type=Float,Description="Correlation: the maximum correlation between the test sample and any other sample in the full set of BAM files (Decon)">
##FORMAT=<ID=BF,Number=1,Type=Float,Description="Bayes factor associated with the call (Decon)">
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##reference=file:/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/AnnotSV/Annotations_Human/BreakpointsAnnotations/GCcontent/GRCh37/GRCh37_chromFa.fasta
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample1	sample2
1	14110160	.	T	<DUP:TANDEM>	999	PASS	AnnotSV_ID=1_14110160_14110400_DUP_1;SV_start=14110160;INFO=END=14110400;Annotation_mode=full,split;CytoBand=p36.21;Gene_name=PRDM2;Closest_left=PDPN;Closest_right=KAZN-AS1;Gene_count=1;Tx=.,NM_001135610;Tx_version=.,2;Tx_start=.,14026682;Tx_end=.,14151574;Overlapped_tx_length=.,241;Overlapped_CDS_length=.,0;Overlapped_CDS_percent=.,0;Exon_count=.,8;Location=.,intron6-intron6;Location2=.,CDS;Dist_nearest_SS=.,32521;Nearest_SS_type=.,3';Intersect_start=.,14110159;Intersect_end=.,14110400;po_P_gain_source=dbVar:nssv15156967|dbVar:nssv15156970|dbVar:nssv15149867|nssv15151118|dbVar:nssv15148982|dbVar:nssv15128051|dbVar:nssv17976696|dbVar:nssv15147542|dbVar:nssv15145882|dbVar:nssv15133500;po_P_gain_coord=1:47852-249228449|1:82155-249218992|1:849468-249224684|1:6614946-16382506|1:8990091-16518045|1:10175556-16609644|1:11081809-15563167|1:12687422-14320473|1:13946475-18792666;po_P_gain_percent=0.00|0.00|0.00|0.00|0.00|0.00|0.01|0.01|0.00;po_P_loss_source=dbVar:nssv15147705|dbVar:nssv17956141|dbVar:nssv15147183|dbVar:nssv18792748|dbVar:nssv15148223|dbVar:nssv15148835|dbVar:nssv18330519|dbVar:nssv15151350|dbVar:nssv15146487|dbVar:nssv15145965|dbVar:nssv15145980|dbVar:nssv15127569|dbVar:nssv15147187|dbVar:nssv15151873|dbVar:nssv15146553|dbVar:nssv15146554|dbVar:nssv15145869|dbVar:nssv15136410;po_P_loss_coord=1:746609-15077159|1:849467-17525065|1:2922758-18015429|1:4481272-20530242|1:5423887-18686796|1:6363702-16125588|1:6758934-19287770|1:8850515-16272383|1:9094731-16767960|1:9488598-16142286|1:10324456-16107335|1:10448140-16107331|1:10681834-16847204|1:10722726-14267773|1:10869097-16748995|1:11181683-16650993|1:12784753-16361283|1:13727392-15683440;po_P_loss_percent=0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.01|0.00|0.00|0.01|0.01;B_inv_source=IMH;B_inv_coord=1:4599855-170869838|1:6507276-17027937|1:6515330-17019897|1:7662178-50846966;B_inv_AFmax=0.301;GC_content_left=0.395;GC_content_right=0.445;Repeat_coord_left=1:14109929-14110078;Repeat_type_left=MIR3;DDD_HI_percent=40.49;ExAC_delZ=0.415153458557427;ExAC_dupZ=0.373434796722033;ExAC_cnvZ=0.547664002453622;ExAC_synZ=-1.78317179376506;ExAC_misZ=0.436072998472952;NCBI_gene_ID=.,7799;HGNC_gene_ID=.,HGNC:9347;LOEUF_bin=0;GnomAD_pLI=0.99996;ExAC_pLI=0.99504;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2L_(PRDM2,_+0.00)|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=3,full=3;END=14110400;SVLEN=240	GT	0/1	0/1
2	110138404	.	N	<DEL>	.	.	AnnotSV_ID=2_110138404_110222824_DEL_1;SV_start=110138404;INFO=END=110222824;Annotation_mode=full,split;CytoBand=q12.3-q13;Gene_name=SH3RF3;Closest_left=MIR4266;Closest_right=SEPTIN10;Gene_count=1;Tx=.,NM_001099289;Tx_version=.,3;Tx_start=.,109745660;Tx_end=.,110262211;Overlapped_tx_length=.,84421;Overlapped_CDS_length=.,0;Overlapped_CDS_percent=.,0;Exon_count=.,10;Location=.,intron9-intron9;Location2=.,CDS;Dist_nearest_SS=.,31011;Nearest_SS_type=.,5';Intersect_start=.,110138403;Intersect_end=.,110222824;po_P_gain_source=dbVar:nssv17976961|dbVar:nssv15161685|nssv15161863|dbVar:nssv15174359|dbVar:nssv15174602|dbVar:nssv15148156|dbVar:nssv15152720|dbVar:nssv15147149|dbVar:nssv15147463|dbVar:nssv15151697;po_P_gain_coord=2:2-243199373|2:12772-242783384|2:14239-243048760|2:15673-243101834|2:95344258-111359986|2:96353031-114045463|2:98288986-110968895|2:102327288-111548995|2:107096424-112235727;po_P_gain_percent=0.03|0.03|0.03|0.03|0.53|0.48|0.67|0.92|1.64;po_P_loss_source=dbVar:nssv18326420|dbVar:nssv15155128|dbVar:nssv15124851|dbVar:nssv15146967|dbVar:nssv15152708|dbVar:nssv16254438|dbVar:nssv17969746|dbVar:nssv16207824|dbVar:nssv17977078|dbVar:nssv15119790|dbVar:nssv15152686|dbVar:nssv15605770|dbVar:nssv15147710|dbVar:nssv15147572;po_P_loss_coord=2:11504319-111365996|2:40607043-146902764|2:50886433-243102476|2:106423311-115054828|2:107020783-111365996|2:107029681-113187742|2:108446956-110504318|2:108499810-110504318|2:109157563-110497991|2:109195458-110494136|2:109295036-110504318|2:109301075-110482930|2:109556628-117570152|2:109798248-125658380;po_P_loss_percent=0.08|0.08|0.04|0.98|1.94|1.37|4.10|4.21|6.30|6.50|6.98|7.14|1.05|0.53;B_inv_source=IMH;B_inv_coord=2:26280501-162970618|2:87141173-111334517|2:87428138-112522401|2:87449271-112501273|2:87515690-112330711|2:87531266-112315176|2:106984840-112624021;B_inv_AFmax=0.3294;GC_content_left=0.000_(200_N);GC_content_right=0.000_(200_N);Gap_left=2:110109338-110251337;Gap_right=2:110109338-110251337;DDD_HI_percent=65.25;ExAC_synZ=-0.881765523739939;ExAC_misZ=0.150060065037892;NCBI_gene_ID=.,344558;HGNC_gene_ID=.,HGNC:24699;LOEUF_bin=2;GnomAD_pLI=0.028368;ExAC_pLI=0.9811;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=3,full=3;END=110222824;SVLEN=-84420	GT	0/1	0/1
5	80251899	.	C	<INS>	999	PASS	AnnotSV_ID=5_80251899_80261899_INS_1;SV_start=80251899;INFO=END=80261899;Annotation_mode=full,split,split;CytoBand=q14.1;Gene_name=RASGRF2-AS1|RASGRF2,RASGRF2-AS1,RASGRF2;Closest_left=MSH3;Closest_right=CKMT2;Gene_count=2;Tx=.,NR_105015,NM_006909;Tx_version=.,1,3;Tx_start=.,80243511,80256181;Tx_end=.,80256726,80525981;Overlapped_tx_length=.,4828,5718;Overlapped_CDS_length=.,0,288;Overlapped_CDS_percent=.,0,7;Exon_count=.,4,27;Location=.,txStart-intron1,txStart-intron1;Location2=.,UTR,5'UTR-CDS;Dist_nearest_SS=.,4599,5054;Nearest_SS_type=.,3',5';Intersect_start=.,80251898,80256181;Intersect_end=.,80256726,80261899;RE_gene=DHFR_(morbid/RE=GH_enhancer+GH_promoter_enhancer);po_P_gain_source=dbVar:nssv15164761|dbVar:nssv15164765|dbVar:nssv15151111|nssv15151221|dbVar:nssv16206767|dbVar:nssv15120567;po_P_gain_coord=5:13649-180905029|5:25329-180693344|5:113578-180719789|5:72790062-97478870|5:73459012-110145153;po_P_gain_percent=0.01|0.01|0.01|0.04|0.03;po_P_loss_source=dbVar:nssv15151179;po_P_loss_coord=5:17628742-176575720;po_P_loss_percent=0.01;B_inv_source=IMH;B_inv_coord=5:24758285-101693420|5:28691217-97582419;B_inv_AFmax=0.2263;po_B_loss_someG_coord=chr5:80248529-80253459_dbVar;GC_content_left=0.45;GC_content_right=0.33;Repeat_coord_left=5:80251821-80252359;Repeat_type_left=MER41A;Repeat_coord_right=5:80261899-80261940;Repeat_type_right=(TG)n;DDD_HI_percent=32.53,.,32.53;ExAC_delZ=1.25977458409673,.,1.25977458409673;ExAC_dupZ=0.206923040395808,.,0.206923040395808;ExAC_cnvZ=0.647601778097669,.,0.647601778097669;ExAC_synZ=0.973590350721445,.,0.973590350721445;ExAC_misZ=3.58412504045464,.,3.58412504045464;NCBI_gene_ID=.,102524628,5924;HGNC_gene_ID=.,HGNC:40499,HGNC:9876;LOEUF_bin=1,.,1;GnomAD_pLI=0.15243,.,0.15243;ExAC_pLI=0.99874,.,0.99874;ACMG_class=.,full=NA,full=NA;END=80261899	GT	1/1	0/1


================================================
FILE: share/doc/AnnotSV/Example/test2.vcf
================================================
##fileformat=VCFv4.3
##fileDate=23/03/2023
##source=AnnotSV
##FILTER=<ID=PASS,Description="Passed filter">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=DEL,Description="Deletion">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="length of event">
##INFO=<ID=END,Number=1,Type=Integer,Description="End of event">
##INFO=<ID=CN,Number=1,Type=Integer,Description="Copy number">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variation">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##contig=<ID=chr1,length=249250621,assembly=hg19>
##contig=<ID=chr2,length=243199373,assembly=hg19>
##contig=<ID=chr3,length=198022430,assembly=hg19>
##contig=<ID=chr4,length=191154276,assembly=hg19>
##contig=<ID=chr5,length=180915260,assembly=hg19>
##contig=<ID=chr6,length=171115067,assembly=hg19>
##contig=<ID=chr7,length=159138663,assembly=hg19>
##contig=<ID=chr8,length=146364022,assembly=hg19>
##contig=<ID=chr9,length=141213431,assembly=hg19>
##contig=<ID=chr10,length=135534747,assembly=hg19>
##contig=<ID=chr11,length=135006516,assembly=hg19>
##contig=<ID=chr12,length=133851895,assembly=hg19>
##contig=<ID=chr13,length=115169878,assembly=hg19>
##contig=<ID=chr14,length=107349540,assembly=hg19>
##contig=<ID=chr15,length=102531392,assembly=hg19>
##contig=<ID=chr16,length=90354753,assembly=hg19>
##contig=<ID=chr17,length=81195210,assembly=hg19>
##contig=<ID=chr18,length=78077248,assembly=hg19>
##contig=<ID=chr19,length=59128983,assembly=hg19>
##contig=<ID=chr20,length=63025520,assembly=hg19>
##contig=<ID=chr21,length=48129895,assembly=hg19>
##contig=<ID=chr22,length=51304566,assembly=hg19>
##contig=<ID=chrM,length=16571,assembly=hg19>
##contig=<ID=chrX,length=155270560,assembly=hg19>
##contig=<ID=chrY,length=59373566,assembly=hg19>
##reference=file:hg19
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample1	sample2
chr1	14110160	.	G	<DUP:TANDEM>	999	PASS	END=14110400	GT	0/1	0/1
chr2	110138404	.	T	<DEL>	.	.	END=110222824	GT	0/1	0/1
chr5	80251899	.	T	<INS>	999	PASS	END=80261899	GT	1/1	0/1


================================================
FILE: share/doc/AnnotSV/annotations.md
================================================
# Annotations databases

AnnotSV requires different data sources for the annotation and the ranking of SV. In order to provide a ready to start installation of AnnotSV, each annotation source (that do not require a commercial license) is automatically downloaded during the installation.

The aim of each of these sources is fully explained in the [README](../../../README.AnnotSV_3.5.7.pdf) file.

Annotation can be performed using either the GRCh37 or GRCh38 build of the human genome (user defined). Some of the annotations are linked to the gene name and thus provided independently of the genome build.


================================================
FILE: share/doc/AnnotSV/quickstart.md
================================================

# Quick Installation

Requirements are fully explained in the [README](../../../README.AnnotSV_3.5.7.pdf) file.

1. The sources can be cloned to any directory:
```
cd /path/to/install/
git clone https://github.com/lgmgeo/AnnotSV.git
```
2. Then, the user can easily install the package using make:
```
cd /path/to/install/AnnotSV
make PREFIX=. install
make PREFIX=. install-human-annotation
make PREFIX=. install-mouse-annotation
```

3. Set the global environmental variable as the location of the git repo on your system. 

In csh:
```
setenv ANNOTSV /path/to/install/AnnotSV
```
In bash:
```
export ANNOTSV=/path/to/install/AnnotSV
```

# TEST

1. Change to the repo directory, and run the test
```
cd /path/to/install/AnnotSV/share/doc/AnnotSV/Example/
$ANNOTSV/bin/AnnotSV -SVinputFile test.bed -outputFile ./test.annotated.tsv -svtBEDcol 4
```
2. Examine the output

<br />



================================================
FILE: share/doc/AnnotSV/ranking.md
================================================
# SV ranking/classification

In order to assist the clinical interpretation of SV, AnnotSV provides on top of the annotations a ranking score to assess SV pathogenicity. This score is an adaptation of the work provided by the joint consensus recommendation of ACMG and ClinGen ([Riggs et al., 2020](https://www.nature.com/articles/s41436-019-0686-8)). We especially took attention in scoring as much as possible recessive SV observed in various dataset (NGS, array based...)

<br />

| Score | Class type | Class|
| :---: | :--- | :--- |
|   0.99 or more points | Pathogenic | Class 5 |
| 0.90 to 0.98 points   | Likely pathogenic	| Class 4 |
| 0.89 to −0.89 points | Variant of uncertain significance | Class 3 |
| −0.90 to −0.98 points | Likely benign	| Class 2 |
| −0.99 or fewer points | Benign | Class 1 |

<br />

# Method

The comprehensive and detailed scoring guidelines are available in the [Scoring_Criteria_AnnotSV](../../../Scoring_Criteria_AnnotSV_v3.4.xlsx) file (see Table1 for loss SV and Table2 for gain SV).


================================================
FILE: share/doc/AnnotSV/webserver_overview.md
================================================
# Webserver overview
The AnnotSV webserver is separated into the annotation part (AnnotSV engine) and the analysis and visualization part:

![](images/AnnotSV_overview.jpg)

## Input
Multiple input formats are supported by the AnnotSV webserver corresponding to different usages. One can query directly the server using SV coordinates (format is Chromosome:Begin-End SVType) as an easy and fast way to gather annotations and classification for a single SV. Alternatively and if one requires a larger analysis (multiple SV), a [BED](https://genome.ucsc.edu/FAQ/FAQformat.html#format1) (browser extensible data) file or a [VCF](https://samtools.github.io/hts-specs/VCFv4.3.pdf) (Variant Call Format) file can be submitted.
<br>
The user can add optional sample related information such as the HPO terms to help prioritization or SNV/indels (additional VCF) to help identify false positive deletion. 

## Annotations
AnnotSV compiles functionally, regulatory and clinically **relevant information** and aims at providing annotations useful to i) **interpret SV potential pathogenicity and ii) filter out SV potential false positives.**
<br />
These **relevant annotations** are detailed in the [README](../../../README.AnnotSV_3.5.7.pdf).

## Phenotype-driven prioritization
To link the patient's phenotypic data to the already available knowledge for each gene, AnnotSV provide a phenotype driven prioritization module based on the [HPO (Human Phenotype Ontology) dataset](https://pubmed.ncbi.nlm.nih.gov/30476213/).

## Ranking
In addition, AnnotSV provides on top of the annotations **a ranking score** to assess SV pathogenicity.
This score is an adaptation of the work provided by [the joint consensus recommendation of ACMG and ClinGen](https://pubmed.ncbi.nlm.nih.gov/31690835/). We especially took attention in scoring as much as possible recessive SV observed in various dataset (NGS, array based...).<br />
**The SV classification is detailed [here](ranking.md).**

## Output
The output file contains the overlaps of the SV with relevant genomic features where the genes refer to RefSeq or ENSEMBL genes (user defined).

Various output formats are available online to visualize your AnnotSV results:
-  a TSV (tab-separated values) file powered by the AnnotSV Annotation Engine
-  a VCF file powered by [variantconvert](https://github.com/SamuelNicaise/variantconvert)
-  a knot HTML file and a knot XLSM file powered by [knotAnnotSV](https://github.com/mobidic/knotAnnotSV)
-  an HTML CIRCOS PLOT file powered by [vcf2circos](https://github.com/bioinfo-chru-strasbourg/vcf2circos)


## Typical use
A typical AnnotSV use would be to first look at the annotation and ranking of each SV as a whole (i.e. “full”) and then focus on the content of that SV. Indeed, **there are 2 types of lines produced by AnnotSV** (cf the “AnnotSV type” output column):

- An annotation on the **“full” length** of the SV:
Every SV are reported, even those not covering a gene. This type of annotation gives an estimate of the SV event itself.

- An annotation of the SV **“split” by gene**:
This type of annotation gives an opportunity to focus on each gene overlapped by the SV. Thus, when a SV spans over several genes, the output will contain as many annotations lines as covered genes (cf example in FAQ). This latter annotation is extremely powerful to shorten the identification of mutation implicated in a specific gene.

The annotations columns available in the output file are detailed in the [README](../../../README.AnnotSV_3.5.7.pdf).


================================================
FILE: share/tcl/AnnotSV/AnnotSV-benignsv.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


# Creation / update (if some data source files are presents) of:
# - $benignLossFile_Sorted
# - $benignGainFile_Sorted
# - $benignInsFile_Sorted
# - $benignInvFile_Sorted
proc checkBenignFiles {} {
    
    global g_AnnotSV
    
    foreach genomeBuild {GRCh37 GRCh38 CHM13} {
        set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
        
        # Files to create / update
        set benignLossFile_Sorted "$benignDir/benign_Loss_SV_$genomeBuild.sorted.bed"
        set benignGainFile_Sorted "$benignDir/benign_Gain_SV_$genomeBuild.sorted.bed"
        set benignInsFile_Sorted "$benignDir/benign_Ins_SV_$genomeBuild.sorted.bed"
        set benignInvFile_Sorted "$benignDir/benign_Inv_SV_$genomeBuild.sorted.bed"
        
        # Text to write only if an update of the sources is requested (in the check* proc).
        set g_AnnotSV(benignText) "\t...creation/update of the \"benign_*_SV_$genomeBuild.sorted.bed\" files ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])\n\t   (done only once)"
        
        # Creation of benign*File_Tmp (not formatted and sorted)
        set benignLossFile_Tmp "$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed"
        set benignGainFile_Tmp "$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed"
        set benignInsFile_Tmp "$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed"
        set benignInvFile_Tmp "$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed"
        file delete -force $benignLossFile_Tmp
        file delete -force $benignGainFile_Tmp
        file delete -force $benignInsFile_Tmp
        file delete -force $benignInvFile_Tmp
        checkGnomAD_benignFile $genomeBuild
        checkDGV_benignFile $genomeBuild
        checkDDD_benignFile $genomeBuild
        check1000g_benignFile $genomeBuild
        checkdbVar_benignFile $genomeBuild
        checkClinGenHITS_benignFile $genomeBuild
        checkClinVar_benignFile $genomeBuild
        checkIMH_benignFile $genomeBuild
        checkCMRI_benignFile $genomeBuild
        checkPacBioCoLoRS_benignFile $genomeBuild
        checkFGR_benignFile $genomeBuild
        checkHPRC_benignFile $genomeBuild
        catch {unset g_AnnotSV(benignText)}
        
        # Creation of *.tmp.formatted.bed
        foreach SVtype {Loss Gain Ins Inv} {
            set benignFile_Sorted "$benignDir/benign_${SVtype}_SV_$genomeBuild.sorted.bed"
            set benignFile_Tmp "$benignDir/benign_${SVtype}_SV_$genomeBuild.tmp.bed"
            if {[file exists $benignFile_Tmp]} {
                # Add the SV from $benign*File_Sorted
                if {[file exists $benignFile_Sorted]} {
                    set id_file1 [open "$benignFile_Sorted" r]
                    set id_file2 [open "$benignFile_Tmp" a]
                    while { [gets $id_file1 line] >= 0 } {
                        puts $id_file2 $line
                    }
                    close $id_file1
                    close $id_file2
                }
                # sort
                catch {checkBed $benignFile_Tmp $benignDir}
                file delete -force $benignFile_Tmp
            }
        }
        
        # Creation of *.sorted.bed:
        # Intersection with very large files can cause trouble with excessive memory usage.
        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        foreach SVtype {Loss Gain Ins Inv} {
            set benignFile_TmpFormatted "$benignDir/benign_${SVtype}_SV_$genomeBuild.tmp.formatted.bed"
            if {![file exist $benignFile_TmpFormatted]} {continue}
            set benignFile_Sorted "$benignDir/benign_${SVtype}_SV_$genomeBuild.sorted.bed"
            set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
            ReplaceTextInFile "#!/bin/bash" $sortTmpFile
            WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
            WriteTextInFile "export LC_ALL=C" $sortTmpFile
            WriteTextInFile "sort -k1,1 -k2,2n $benignFile_TmpFormatted > $benignFile_Sorted" $sortTmpFile
            file attributes $sortTmpFile -permissions 0755
            if {[catch {eval exec bash $sortTmpFile} Message]} {
                puts "-- checkBenignFiles --"
                puts "sort -k1,1 -k2,2n $benignFile_TmpFormatted > $benignFile_Sorted"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
            file delete -force $sortTmpFile
            file delete -force $benignFile_TmpFormatted
        }
        
        # Prepare the update of the overlappedGenes files
        foreach SVtype {"Gain" "Loss" "Ins" "Inv"} {
            set overlappedGenes_in_benign${SVtype}File "$benignDir/overlappedGenes_in_benign_${SVtype}_SV_$genomeBuild.tsv"
            file delete -force [set overlappedGenes_in_benign${SVtype}File]
        }
    }
    
    # Remove some columns from g_AnnotSV(outputColHeader) if the corresponding annotation file doesn't exist
    foreach SVtype {"Gain" "Loss" "Ins" "Inv"} {
        set benignFile_Sorted "$benignDir/benign_${SVtype}_SV_$genomeBuild.sorted.bed"
        if {![file exists $benignFile_Sorted]} {
            set newList {}
            foreach e "$g_AnnotSV(outputColHeader)" {
                if {[regexp "^B_[string tolower ${SVtype}]_" $e]} {continue}
                lappend newList $e
            }
            set g_AnnotSV(outputColHeader) $newList
        }
    }
    
    return
}


# Remove "overlappedGenes_$" files if there was an update of the benign dataset.
proc removeOverlappedGenesBenignFiles {genomeBuild} {
    
    global g_AnnotSV
    
    foreach tx {RefSeq ENSEMBL} {
        foreach SVtype {Loss Gain Ins Inv} {
            set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
            set overlappedGenes_in_benign${SVtype}File "$benignDir/overlappedGenes_${tx}_in_benign_${SVtype}_SV_$genomeBuild.tsv"
            file delete -force [set overlappedGenes_in_benign${SVtype}File]
        }
    }
}

# If they do not exist, creation of:
# - overlappedGenes_$tx_in_benign_Loss_SV_$genomeBuild.tsv
# - overlappedGenes_$tx_in_benign_Gain_SV_$genomeBuild.tsv
# - overlappedGenes_$tx_in_benign_Ins_SV_$genomeBuild.tsv
# - overlappedGenes_$tx_in_benign_Inv_SV_$genomeBuild.tsv
#
# => These files are removed for each update of the benign dataset.
proc checkOverlappedGenesBenignFiles {} {
    
    global g_AnnotSV
    
    if {$g_AnnotSV(organism) eq "Human"} {
        set genomeBuild "$g_AnnotSV(genomeBuild)"
        set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
        set genesDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$genomeBuild"
        
        foreach tx {RefSeq ENSEMBL} {
            set GenesfileFormatted [glob -nocomplain $genesDir/genes.${tx}.sorted.bed]
            
            foreach SVtype {Loss Gain Ins Inv} {
                set benignBEDfile [glob -nocomplain "$benignDir/benign_${SVtype}_SV_$genomeBuild.sorted.bed"]
                
                # Files to create
                set overlappedGenes_in_benign${SVtype}File "$benignDir/overlappedGenes_${tx}_in_benign_${SVtype}_SV_$genomeBuild.tsv"
                if {[file exists [set overlappedGenes_in_benign${SVtype}File]]} {continue}
                
                puts "\t   >>> creation of [set overlappedGenes_in_benign${SVtype}File] ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
                
                # Intersect
                set tmpFile "$g_AnnotSV(outputDir)/[clock seconds]_overlappedGenes_${tx}_in_benign_${SVtype}_SV_$genomeBuild.tmp.bed"
                file delete -force $tmpFile
                if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $GenesfileFormatted -b $benignBEDfile -wa -wb > $tmpFile} Message]} {
                    if {[catch {exec $g_AnnotSV(bedtools) intersect -a $GenesfileFormatted -b $benignBEDfile -wa -wb > $tmpFile} Message]} {
                        puts "-- checkOverlappedGenesBenignFiles, $genomeBuild, $tx, $SVtype --"
                        puts "$g_AnnotSV(bedtools) intersect -sorted -a $GenesfileFormatted -b $benignBEDfile -wa -wb > $tmpFile"
                        puts "$Message"
                        puts "Exit with error"
                        exit 2
                    }
                }
                
                # Parse
                set f [open $tmpFile]
                while {![eof $f]} {
                    set L [gets $f]
                    if {$L eq ""} {continue}
                    set Ls [split $L "\t"]
                    set geneName [lindex $Ls 4]
                    set benignSVcoord [lindex $Ls end-1]
                    lappend L_genes($benignSVcoord) "$geneName"
                }
                file delete -force $tmpFile
                set L_toWrite {}
                foreach coord [array names L_genes] {
                    lappend L_toWrite "$coord\t[join [lsort -unique $L_genes($coord)] ";"]"
                }
                WriteTextInFile [join $L_toWrite "\n"] [set overlappedGenes_in_benign${SVtype}File]
                unset L_genes
            }
        }
    }
}




################################################################################################
## In all the next "check*File" proc, create and then complete the following file:
##   - Benign_Gain_SV_$genomeBuild.tmp.bed
##   - Benign_Loss_SV_$genomeBuild.tmp.bed
##   - Benign_Ins_SV_$genomeBuild.tmp.bed
##   - Benign_Inv_SV_$genomeBuild.tmp.bed
################################################################################################

proc checkClinVar_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if ClinVar file has been downloaded
    ############################################
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
    set ClinVarFileDownloaded [lindex [glob -nocomplain "$benignDir/clinvar*.vcf.gz"] end]
    
    if {$ClinVarFileDownloaded ne ""} {
        # We have some ClinVar annotations to add in $benign*File
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild ClinVar parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        removeOverlappedGenesBenignFiles $genomeBuild
        
        set benignLossFile_Tmp "$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed"
        set benignGainFile_Tmp "$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed"
        set benignInsFile_Tmp "$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed"
        set benignInvFile_Tmp "$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed"
        set L_toWriteLoss {}
        set L_toWriteGain {}
        set L_toWriteIns {}
        set L_toWriteInv {}
        set f [open "| gzip -cd $ClinVarFileDownloaded"]
        while {! [eof $f]} {
            set L [gets $f]
            set Ls [split $L "\t"]
            if {[regexp "^#" $L]} {continue}
            set infos [lindex $Ls 7]
            
            # Selection of the benign variants to keep:
            ###########################################
            # Criteria:
            # - “benign” or “benign/likely benign” clinical significance (CLNSIG)
            # - “criteria_provided”, “_multiple_submitters” or “reviewed_by_expert_panel” SV review status (CLNREVSTAT)
            # - “Deletion” or “Duplication” SV type (CLNVC)
            # - ≥ $g_AnnotSV(SVminSize) bp in size (default 50)
            if {![regexp "ALLELEID=(\[^;\]+)?;.*CLNREVSTAT=(\[^;\]+)?;.*CLNSIG=Benign.*?CLNVC=(\[^;\]+)?" $infos match ALLELEID CLNREVSTAT CLNVC]} {continue}
            if {![regexp "criteria_provided|_multiple_submitters|reviewed_by_expert_panel" $CLNREVSTAT]} {continue}
            if {[regexp "no_assertion_criteria_provided" $CLNREVSTAT]} {continue}
            
            set ref [lindex $Ls 3]
            set alt [lindex $Ls 4]
            set SVlength [expr {abs([string length $ref]-[string length $alt])}]
            if {$SVlength < $g_AnnotSV(SVminSize)} {continue}
            set chrom [lindex $Ls 0]
            set start [lindex $Ls 1]
            # From VCF to BED format:
            if {$start ne 0} {set start [expr {$start-1}]}
            set end [expr {$start+$SVlength}]
            set coord "${chrom}:${start}-$end"
            
            if {$CLNVC eq "Deletion"} {
                lappend L_toWriteLoss "$chrom\t$start\t$end\tCLN:$ALLELEID\t$coord\tCLN"
            } elseif {$CLNVC eq "Duplication"} {
                lappend L_toWriteGain "$chrom\t$start\t$end\tCLN:$ALLELEID\t$coord\tCLN"
            } elseif {$CLNVC eq "Insertion"} {
                lappend L_toWriteIns "$chrom\t$start\t$end\tCLN:$ALLELEID\t$coord\tCLN"
            } elseif {$CLNVC eq "Inversion"} {
                lappend L_toWriteInv "$chrom\t$start\t$end\tCLN:$ALLELEID\t$coord\tCLN"
            }
            
        }
        close $f
        
        # Writing:
        ##########
        puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)"
        if {$L_toWriteLoss ne {}} {
            WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
        }
        if {$L_toWriteGain ne {}} {
            WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
        }
        if {$L_toWriteIns ne {}} {
            WriteTextInFile [join $L_toWriteIns "\n"]  $benignInsFile_Tmp
        }
        if {$L_toWriteInv ne {}} {
            WriteTextInFile [join $L_toWriteInv "\n"]  $benignInvFile_Tmp
        }
        
        # Clean:
        ########
        file delete -force $ClinVarFileDownloaded
    }
    
    return
}


proc checkClinGenHITS_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if ClinGen files have been downloaded
    ##############################################
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
    set ClinGenFileDownloaded1 [glob -nocomplain "$benignDir/ClinGen_gene_curation_list_$genomeBuild.tsv"]
    set ClinGenFileDownloaded2 [glob -nocomplain "$benignDir/ClinGen_region_curation_list_$genomeBuild.tsv"]
    
    
    if {$ClinGenFileDownloaded1 ne "" || $ClinGenFileDownloaded2 ne ""} {
        # We have some ClinGen annotations to add in $benign*File
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild ClinGen parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    } else {return}
    
    removeOverlappedGenesBenignFiles $genomeBuild
    
    set L_files "$ClinGenFileDownloaded1"
    lappend L_files "$ClinGenFileDownloaded2"
    
    set L_toWriteLoss {}
    set L_toWriteGain {}
    set benignLossFile_Tmp "$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed"
    set benignGainFile_Tmp "$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed"
    
    foreach ClinGenFileDownloaded "$L_files" {
        if {$ClinGenFileDownloaded ne ""} {
            set f [open "$ClinGenFileDownloaded"]
            while {! [eof $f]} {
                set L [gets $f]
                set Ls [split $L "\t"]
                # Header 1 and 2:
                #################
                #Gene Symbol    Gene ID cytoBand        Genomic Location        Haploinsufficiency Score        Haploinsufficiency Description  Haploinsufficiency PMID1        Haploinsufficiency PMID2        Haploinsufficiency PMID3 Triplosensitivity Score  Triplosensitivity Description   Triplosensitivity PMID1 Triplosensitivity PMID2 Triplosensitivity PMID3 Date Last Evaluated     Loss phenotype OMIM ID  Triplosensitive phenotype OMIM ID
                
                #ISCA ID        ISCA Region Name        cytoBand        Genomic Location        Haploinsufficiency Score        Haploinsufficiency Description  Haploinsufficiency PMID1        Haploinsufficiency PMID2        Haploinsufficiency PMID3  Triplosensitivity Score Triplosensitivity Description   Triplosensitivity PMID1 Triplosensitivity PMID2 Triplosensitivity PMID3 Date Last Evaluated     Loss phenotype OMIM ID  Triplosensitive phenotype OMIM ID
                
                # Selection of the benign variants to keep:
                ###########################################
                if {[regexp "(^#Gene Symbol)|(^#ISCA ID)" $L]} {
                    set i_id 0 ;# variantaccession
                    set i_coord [lsearch -exact $Ls "Genomic Location"]; if {$i_coord == -1} {puts "$ClinGenFileDownloaded"; puts "Bad header line syntax. Genomic Location column not found - Exit with error"; exit 2}
                    set i_hi [lsearch -exact $Ls "Haploinsufficiency Score"]; if {$i_hi == -1} {puts "$ClinGenFileDownloaded"; puts "Bad header line syntax. Haploinsufficiency Score column not found - Exit with error"; exit 2}
                    set i_ts [lsearch -exact $Ls "Triplosensitivity Score"]; if {$i_ts == -1} {puts "$ClinGenFileDownloaded"; puts "Bad header line syntax. Triplosensitivity column not found - Exit with error"; exit 2}
                    continue
                }
                if {[regexp "^#" $L]} {continue}
                
                set ID [lindex $Ls $i_id]
                set coord [lindex $Ls $i_coord]
                regsub "(chr)| " $coord "" coord
                if { ![regexp "(\[0-9XYMT\]+):(\[0-9\]+)-(\[0-9\]+)" $coord match chrom start end] } {continue} ;# In GRCh38, some coordinates = "tbd" (to be determined)
                set hi [lindex $Ls $i_hi]
                set ts [lindex $Ls $i_ts]
                if {$hi eq "40"} {
                    lappend L_toWriteLoss "$chrom\t$start\t$end\tHI40:$ID\t$coord\tHI"
                }
                if {$ts eq "40"} {
                    lappend L_toWriteGain "$chrom\t$start\t$end\tTS40:$ID\t$coord\tTS"
                }
            }
            close $f
        }
    }
    
    # Writing:
    ##########
    puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain)"
    if {$L_toWriteLoss ne {}} {
        WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
    }
    if {$L_toWriteGain ne {}} {
        WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
    }
    
    # Clean:
    ########
    file delete -force $ClinGenFileDownloaded1
    file delete -force $ClinGenFileDownloaded2
    
    return
}




proc checkDGV_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if DGV files have been downloaded
    ##########################################
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
    set DGVfileDownloaded [glob -nocomplain "$benignDir/GRCh3*_hg*_variants_*.txt"]
    
    if {$DGVfileDownloaded ne ""} {
        # We have some DGV annotations to add in $benign*File
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild DGV parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        removeOverlappedGenesBenignFiles $genomeBuild
        
        set benignLossFile_Tmp "$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed"
        set benignGainFile_Tmp "$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed"
        set benignInsFile_Tmp "$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed"
        set benignInvFile_Tmp "$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed"
        set L_toWriteLoss {}
        set L_toWriteGain {}
        set L_toWriteIns {}
        set L_toWriteInv {}
        
        set f [open "$DGVfileDownloaded"]
        foreach L [LinesFromFile $DGVfileDownloaded] {
            set Ls [split $L "\t"]
            
            # Header:
            #########
            # variantaccession   chr   start   end   varianttype   variantsubtype   reference   pubmedid   method   platform   mergedvariants   supportingvariants   mergedorsample   frequency   samplesize   observedgains   observedlosses   cohortdescription   genes   samples
            # WARNING: the "frequency" field is empty
            if {[regexp "^variantaccession" $L]} {
                set i_id 0 ;# variantaccession
                set i_chr [lsearch -exact $Ls "chr"];     if {$i_chr == -1} {puts "$DGVfileDownloaded"; puts "Bad header line syntax. chr column not found - Exit with error"; exit 2}
                set i_start [lsearch -exact $Ls "start"]; if {$i_start == -1} {puts "$DGVfileDownloaded"; puts "Bad header line syntax. start column not found - Exit with error"; exit 2}
                set i_end [lsearch -exact $Ls "end"];     if {$i_end == -1} {puts "$DGVfileDownloaded"; puts "Bad header line syntax. end column not found - Exit with error"; exit 2}
                set i_samplesize [lsearch -exact $Ls "samplesize"];  if {$i_samplesize == -1} {puts "$DGVfileDownloaded"; puts "Bad header line syntax. samplesize column not found - Exit with error"; exit 2}
                set i_obsgains [lsearch -exact $Ls "observedgains"]; if {$i_obsgains == -1} {puts "$DGVfileDownloaded"; puts "Bad header line syntax. observedgains column not found - Exit with error"; exit 2}
                set i_obsloss [lsearch -exact $Ls "observedlosses"]; if {$i_obsloss == -1} {puts "$DGVfileDownloaded"; puts "Bad header line syntax. observedlosses column not found - Exit with error"; exit 2}
                continue
            }
            
            # Selection of the benign variants to keep:
            ###########################################
            # ≥ 500 individuals tested
            set samplesize [lindex $Ls $i_samplesize]
            if {$samplesize <= $g_AnnotSV(minTotalNumber)} {continue}
            # allele frequency > 0.1%
            set obsgains [lindex $Ls $i_obsgains]
            set obsloss [lindex $Ls $i_obsloss]
            set freqgain [expr {$obsgains*100/(2*$samplesize)}]
            set freqloss [expr {$obsloss*100/(2*$samplesize)}]
            set id [lindex $Ls $i_id]
            set chr [lindex $Ls $i_chr]
            set start [lindex $Ls $i_start]
            set end [lindex $Ls $i_end]
            set coord "${chr}:${start}-$end"
            if {$freqgain > 0.1} {
                set infos "$chr\t$start\t$end\t$id\t$coord\t[format "%.4f" [expr {$freqgain*1.0/100}]]"
                lappend L_toWriteGain "$infos"
            }
            if {$freqloss > 0.1} {
                set infos "$chr\t$start\t$end\t$id\t$coord\t[format "%.4f" [expr {$freqloss*1.0/100}]]"
                lappend L_toWriteLoss "$infos"
            }
        }
        
        # Writing:
        ##########
        puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)"
        if {$L_toWriteLoss ne {}} {
            WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
        }
        if {$L_toWriteGain ne {}} {
            WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
        }
        if {$L_toWriteIns ne {}} {
            WriteTextInFile [join $L_toWriteIns "\n"]  $benignInsFile_Tmp
        }
        if {$L_toWriteInv ne {}} {
            WriteTextInFile [join $L_toWriteInv "\n"]  $benignInvFile_Tmp
        }
        
        # Clean:
        ########
        file delete -force $DGVfileDownloaded
        
    }
    
    return
}



proc checkGnomAD_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    # Timing: 15 min for GRCh38
    
    if {$genomeBuild eq "GRCh37"} {
        ## Check if GRCh37 gnomAD SV file (v2.1) has been downloaded
        ############################################################
        set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/GRCh37"
        set gnomADfileDownloaded [glob -nocomplain "$benignDir/gnomad_v2.1_sv.sites.bed.gz"]
        
        if {$gnomADfileDownloaded ne ""} {
            # We have some GRCh37 gnomAD annotations to add in $benign*File
            if {[info exists g_AnnotSV(benignText)]} {
                puts $g_AnnotSV(benignText)
                unset g_AnnotSV(benignText)
            }
            puts "\t   >>> GRCh37 gnomAD parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
            
            removeOverlappedGenesBenignFiles $genomeBuild
            
            set benignLossFile_Tmp "$benignDir/benign_Loss_SV_GRCh37.tmp.bed"
            set benignGainFile_Tmp "$benignDir/benign_Gain_SV_GRCh37.tmp.bed"
            set benignInsFile_Tmp "$benignDir/benign_Ins_SV_GRCh37.tmp.bed"
            set benignInvFile_Tmp "$benignDir/benign_Inv_SV_GRCh37.tmp.bed"
            set L_toWriteLoss {}
            set L_toWriteGain {}
            set L_toWriteIns {}
            set L_toWriteInv {}
            
            set f [open "| gzip -cd $gnomADfileDownloaded"]
            while {![eof $f]} {
                set L [gets $f]
                if {$L eq ""} {continue}
                set Ls [split $L "\t"]
                
                # Header:
                #########
                #chrom  start   end     name    svtype  ALGORITHMS      BOTHSIDES_SUPPORT       CHR2    CPX_INTERVALS   CPX_TYPE        END2    END     EVIDENCE        HIGH_SR_BACKGROUND      PCRPLUS_DEPLETED        PESR_GT_OVERDISPERSION    POS2    PROTEIN_CODING__COPY_GAIN       PROTEIN_CODING__DUP_LOF PROTEIN_CODING__DUP_PARTIAL     PROTEIN_CODING__INTERGENIC      PROTEIN_CODING__INTRONIC        PROTEIN_CODING__INV_SPAN        PROTEIN_CODING__LOF       PROTEIN_CODING__MSV_EXON_OVR    PROTEIN_CODING__NEAREST_TSS     PROTEIN_CODING__PROMOTER        PROTEIN_CODING__UTR     SOURCE  STRANDS SVLEN   SVTYPE  UNRESOLVED_TYPE UNSTABLE_AF_PCRPLUS     VARIABLE_ACROSS_BATCHES   AN      AC      AF      N_BI_GENOS      N_HOMREF        N_HET   N_HOMALT        FREQ_HOMREF     FREQ_HET        FREQ_HOMALT     MALE_AN MALE_AC MALE_AF MALE_N_BI_GENOS MALE_N_HOMREF   MALE_N_HET      MALE_N_HOMALT     MALE_FREQ_HOMREF        MALE_FREQ_HET   MALE_FREQ_HOMALT        MALE_N_HEMIREF  MALE_N_HEMIALT  MALE_FREQ_HEMIREF       MALE_FREQ_HEMIALT       PAR     FEMALE_AN       FEMALE_AC       FEMALE_AF       FEMALE_N_BI_GENOS FEMALE_N_HOMREF FEMALE_N_HET    FEMALE_N_HOMALT FEMALE_FREQ_HOMREF      FEMALE_FREQ_HET FEMALE_FREQ_HOMALT      POPMAX_AF       AFR_AN  AFR_AC  AFR_AF  AFR_N_BI_GENOS  AFR_N_HOMREF    AFR_N_HET       AFR_N_HOMALT      AFR_FREQ_HOMREF AFR_FREQ_HET    AFR_FREQ_HOMALT AFR_MALE_AN     AFR_MALE_AC     AFR_MALE_AF     AFR_MALE_N_BI_GENOS     AFR_MALE_N_HOMREF       AFR_MALE_N_HET  AFR_MALE_N_HOMALT       AFR_MALE_FREQ_HOMREF    AFR_MALE_FREQ_HET AFR_MALE_FREQ_HOMALT    AFR_MALE_N_HEMIREF      AFR_MALE_N_HEMIALT      AFR_MALE_FREQ_HEMIREF   AFR_MALE_FREQ_HEMIALT   AFR_FEMALE_AN   AFR_FEMALE_AC   AFR_FEMALE_AF   AFR_FEMALE_N_BI_GENOS   AFR_FEMALE_N_HOMREF       AFR_FEMALE_N_HET        AFR_FEMALE_N_HOMALT     AFR_FEMALE_FREQ_HOMREF  AFR_FEMALE_FREQ_HET     AFR_FEMALE_FREQ_HOMALT  AMR_AN  AMR_AC  AMR_AF  AMR_N_BI_GENOS  AMR_N_HOMREF    AMR_N_HET       AMR_N_HOMALT      AMR_FREQ_HOMREF AMR_FREQ_HET    AMR_FREQ_HOMALT AMR_MALE_AN     AMR_MALE_AC     AMR_MALE_AF     AMR_MALE_N_BI_GENOS     AMR_MALE_N_HOMREF       AMR_MALE_N_HET  AMR_MALE_N_HOMALT       AMR_MALE_FREQ_HOMREF    AMR_MALE_FREQ_HET AMR_MALE_FREQ_HOMALT    AMR_MALE_N_HEMIREF      AMR_MALE_N_HEMIALT      AMR_MALE_FREQ_HEMIREF   AMR_MALE_FREQ_HEMIALT   AMR_FEMALE_AN   AMR_FEMALE_AC   AMR_FEMALE_AF   AMR_FEMALE_N_BI_GENOS   AMR_FEMALE_N_HOMREF       AMR_FEMALE_N_HET        AMR_FEMALE_N_HOMALT     AMR_FEMALE_FREQ_HOMREF  AMR_FEMALE_FREQ_HET     AMR_FEMALE_FREQ_HOMALT  EAS_AN  EAS_AC  EAS_AF  EAS_N_BI_GENOS  EAS_N_HOMREF    EAS_N_HET       EAS_N_HOMALT      EAS_FREQ_HOMREF EAS_FREQ_HET    EAS_FREQ_HOMALT EAS_MALE_AN     EAS_MALE_AC     EAS_MALE_AF     EAS_MALE_N_BI_GENOS     EAS_MALE_N_HOMREF       EAS_MALE_N_HET  EAS_MALE_N_HOMALT       EAS_MALE_FREQ_HOMREF    EAS_MALE_FREQ_HET EAS_MALE_FREQ_HOMALT    EAS_MALE_N_HEMIREF      EAS_MALE_N_HEMIALT      EAS_MALE_FREQ_HEMIREF   EAS_MALE_FREQ_HEMIALT   EAS_FEMALE_AN   EAS_FEMALE_AC   EAS_FEMALE_AF   EAS_FEMALE_N_BI_GENOS   EAS_FEMALE_N_HOMREF       EAS_FEMALE_N_HET        EAS_FEMALE_N_HOMALT     EAS_FEMALE_FREQ_HOMREF  EAS_FEMALE_FREQ_HET     EAS_FEMALE_FREQ_HOMALT  EUR_AN  EUR_AC  EUR_AF  EUR_N_BI_GENOS  EUR_N_HOMREF    EUR_N_HET       EUR_N_HOMALT      EUR_FREQ_HOMREF EUR_FREQ_HET    EUR_FREQ_HOMALT EUR_MALE_AN     EUR_MALE_AC     EUR_MALE_AF     EUR_MALE_N_BI_GENOS     EUR_MALE_N_HOMREF       EUR_MALE_N_HET  EUR_MALE_N_HOMALT       EUR_MALE_FREQ_HOMREF    EUR_MALE_FREQ_HET EUR_MALE_FREQ_HOMALT    EUR_MALE_N_HEMIREF      EUR_MALE_N_HEMIALT      EUR_MALE_FREQ_HEMIREF   EUR_MALE_FREQ_HEMIALT   EUR_FEMALE_AN   EUR_FEMALE_AC   EUR_FEMALE_AF   EUR_FEMALE_N_BI_GENOS   EUR_FEMALE_N_HOMREF       EUR_FEMALE_N_HET        EUR_FEMALE_N_HOMALT     EUR_FEMALE_FREQ_HOMREF  EUR_FEMALE_FREQ_HET     EUR_FEMALE_FREQ_HOMALT  OTH_AN  OTH_AC  OTH_AF  OTH_N_BI_GENOS  OTH_N_HOMREF    OTH_N_HET       OTH_N_HOMALT      OTH_FREQ_HOMREF OTH_FREQ_HET    OTH_FREQ_HOMALT OTH_MALE_AN     OTH_MALE_AC     OTH_MALE_AF     OTH_MALE_N_BI_GENOS     OTH_MALE_N_HOMREF       OTH_MALE_N_HET  OTH_MALE_N_HOMALT       OTH_MALE_FREQ_HOMREF    OTH_MALE_FREQ_HET OTH_MALE_FREQ_HOMALT    OTH_MALE_N_HEMIREF      OTH_MALE_N_HEMIALT      OTH_MALE_FREQ_HEMIREF   OTH_MALE_FREQ_HEMIALT   OTH_FEMALE_AN   OTH_FEMALE_AC   OTH_FEMALE_AF   OTH_FEMALE_N_BI_GENOS   OTH_FEMALE_N_HOMREF       OTH_FEMALE_N_HET        OTH_FEMALE_N_HOMALT     OTH_FEMALE_FREQ_HOMREF  OTH_FEMALE_FREQ_HET     OTH_FEMALE_FREQ_HOMALT  FILTER
                if {[regexp "^#chrom" $L]} {
                    set i_chrom      [lsearch -exact $Ls "#chrom"];       if {$i_chrom == -1} {puts "Bad header line syntax. #CHROM column not found - Exit with error"; exit 2}
                    set i_start      [lsearch -exact $Ls "start"];        if {$i_start == -1} {puts "Bad header line syntax. START column not found - Exit with error"; exit 2}
                    set i_end        [lsearch -exact $Ls "end"];          if {$i_end == -1} {puts "Bad header line syntax. END column not found - Exit with error"; exit 2}
                    set i_svid       [lsearch -exact $Ls "name"];         if {$i_svid == -1} {puts "Bad header line syntax. NAME column not found - Exit with error"; exit 2}
                    set i_svtype     [lsearch -exact $Ls "svtype"];       if {$i_svtype == -1} {puts "Bad header line syntax. SVTYPE column not found - Exit with error"; exit 2}
                    set i_nhomalt    [lsearch -exact $Ls "N_HOMALT"];     if {$i_nhomalt == -1} {puts "Bad header line syntax. N_HOMALT column not found - Exit with error"; exit 2}
                    set i_popmaxaf   [lsearch -exact $Ls "POPMAX_AF"];    if {$i_popmaxaf == -1} {puts "Bad header line syntax. POPMAX_AF column not found - Exit with error"; exit 2}
                    set i_filter     [lsearch -exact $Ls "FILTER"];       if {$i_filter == -1} {puts "Bad header line syntax. FILTER column not found - Exit with error"; exit 2}
                    continue
                }
                
                # Selection of the benign variants to keep:
                ###########################################
                set FILTER [lindex $Ls $i_filter]
                if {$FILTER != "PASS"} {continue}
                
                set SVTYPE [lindex $Ls $i_svtype]
                regsub ":.+" $SVTYPE "" SVTYPE
                # WARNING:
                # - MCNV have multiple coma-separated-values for nhet, nhomalt, af and popmaxaf...
                # - "gnomad_v2_sv.sites.bed"      => 445858 lines of which only 1148 are MCNV
                #   "gnomad_v2.1_sv.sites.bed.gz" => 387478 lines of which only 1108 are MCNV (<=> "CN=0")
                # => These SV are not selected.
                if {[lsearch -exact {DEL DUP INS INV} "$SVTYPE"] eq -1} {continue}
                
                # At least one population allele frequency > 0.1% AND at least 5 homozygous individuals
                set nhomalt    [lindex $Ls $i_nhomalt]
                set popmaxaf   [lindex $Ls $i_popmaxaf]
                if {$popmaxaf < 0.001 || $nhomalt < 5} {continue}
                
                set chrom      [lindex $Ls $i_chrom]
                set start      [lindex $Ls $i_start]
                set end        [lindex $Ls $i_end]
                set svid       [lindex $Ls $i_svid]
                set coord "$chrom:${start}-$end"
                set infos "$chrom\t$start\t$end\t$svid\t$coord\t[format "%.4f" $popmaxaf]"
                
                if {$SVTYPE eq "DEL"} {
                    lappend L_toWriteLoss "$infos"
                }
                if {$SVTYPE eq "DUP"} {
                    lappend L_toWriteGain "$infos"
                }
                if {$SVTYPE eq "INS"} {
                    lappend L_toWriteIns "$infos"
                }
                if {$SVTYPE eq "INV"} {
                    lappend L_toWriteInv "$infos"
                }
            }
            close $f
            
            # Writing:
            ##########
            puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)"
            if {$L_toWriteLoss ne {}} {
                WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
            }
            if {$L_toWriteGain ne {}} {
                WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
            }
            if {$L_toWriteIns ne {}} {
                WriteTextInFile [join $L_toWriteIns "\n"]  $benignInsFile_Tmp
            }
            if {$L_toWriteInv ne {}} {
                WriteTextInFile [join $L_toWriteInv "\n"]  $benignInvFile_Tmp
            }
            # Clean
            file delete -force $gnomADfileDownloaded
        }
        
    } elseif {$genomeBuild eq "GRCh38"} {
        
        ## Check if GRCh38 gnomAD SV files (v4.0) have been downloaded
        ##############################################################
        set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/GRCh38"
        set gnomADfilesDownloaded [glob -nocomplain "$benignDir/gnomad.v4.0.sv.chr*.vcf.gz"]
        
        if {$gnomADfilesDownloaded ne ""} {
            # We have some GRCh38 gnomAD annotations to add in $benign*File
            if {[info exists g_AnnotSV(benignText)]} {
                puts $g_AnnotSV(benignText)
                unset g_AnnotSV(benignText)
            }
            puts "\t   >>> GRCh38 gnomAD parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
            
            removeOverlappedGenesBenignFiles $genomeBuild
            
            set benignLossFile_Tmp "$benignDir/benign_Loss_SV_GRCh38.tmp.bed"
            set benignGainFile_Tmp "$benignDir/benign_Gain_SV_GRCh38.tmp.bed"
            set benignInsFile_Tmp "$benignDir/benign_Ins_SV_GRCh38.tmp.bed"
            set benignInvFile_Tmp "$benignDir/benign_Inv_SV_GRCh38.tmp.bed"
            set L_toWriteLoss {}
            set L_toWriteGain {}
            set L_toWriteIns {}
            set L_toWriteInv {}
            
            foreach gnomADfileDownloaded $gnomADfilesDownloaded {
                puts "\t       [file tail $gnomADfileDownloaded] ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
                # VCFs do not contain multiallelic sites (no need to split into multiple rows)
                set f [open "| gzip -cd $gnomADfileDownloaded"]
                while {![eof $f]} {
                    set L [gets $f]
                    if {[string index $L 0] eq "#" || $L eq ""} {continue}
                    set Ls [split $L "\t"]
                    
                    set FILTER [lindex $Ls 6]
                    if {$FILTER != "PASS"} {continue}
                    
                    set chrom [lindex $Ls 0]
                    set pos [lindex $Ls 1]
                    # From VCF to BED:
                    if {$pos ne 0} {set pos [expr {$pos-1}]}
                    
                    set svid [lindex $Ls 2]
                    set ref [lindex $Ls 3]
                    set alt [lindex $Ls 4]
                    
                    set L_infos [split [lindex $Ls 7] ";"]
                    
                    # WARNING: for the following search (succession of "lsearch" commands), keep the same order than the feature in the VCF lines:
                    # "END SVTYPE controls_and_biobanks_AN controls_and_biobanks_AF controls_and_biobanks_N_HOMALT"
                    set k [lsearch -regexp $L_infos "^END="]
                    if {$k eq -1} {continue}
                    set END [lindex [split [lindex $L_infos $k] "="] 1]
                    
                    set k [lsearch -start $k -regexp $L_infos "^SVTYPE="]
                    if {$k eq -1} {continue}
                    set SVTYPE [lindex [split [lindex $L_infos $k] "="] 1]
                    # Skip SVTYPE="BND||CPX||CTX"
                    if {$SVTYPE eq "BND" || $SVTYPE eq "CPX" || $SVTYPE eq "CTX"} {continue}
                    
                    set k [lsearch -start $k -regexp $L_infos "^controls_and_biobanks_AN="]
                    if {$k eq -1} {continue}
                    set GD_AN [lindex [split [lindex $L_infos $k] "="] 1]
                    # Skip SV with controls_and_biobanks_AN < 1000
                    if {$GD_AN < 1000} {continue}
                    
                    set k [lsearch -start $k -regexp $L_infos "^controls_and_biobanks_AF="]
                    if {$k eq -1} {continue}
                    set GD_AF [lindex [split [lindex $L_infos $k] "="] 1]
                    # Skip SV with controls_and_biobanks_AF < 0.1% (minimum for the "-benignAF" option)
                    if {$GD_AF < 0.001} {continue}
                    
                    set k [lsearch -start $k -regexp $L_infos "^controls_and_biobanks_N_HOMALT="]
                    if {$k eq -1} {continue}
                    set GD_N_HOMALT [lindex [split [lindex $L_infos $k] "="] 1]
                    # Skip SV with "controls_and_biobanks_N_HOMALT < 5"
                    if {$GD_N_HOMALT < 5} {continue}
                    
                    set coord "$chrom:${pos}-$END"
                    set infos "$chrom\t$pos\t$END\t$svid\t$coord\t[format "%.4f" $GD_AF]"
                    
                    if {[regexp "DEL" $SVTYPE]} {
                        lappend L_toWriteLoss "$infos"
                    }
                    if {[regexp "DUP" $SVTYPE]} {
                        lappend L_toWriteGain "$infos"
                    }
                    if {[regexp "INS" $SVTYPE]} {
                        lappend L_toWriteIns "$infos"
                    }
                    if {$SVTYPE eq "INV"} {
                        lappend L_toWriteInv "$infos"
                    }
                    # if {$END eq $pos} {puts "WARNING: SVTYPE=$SVTYPE -- END=$END eq POS=$pos $svid"}
                    # if {$END < $pos}  {puts "WARNING: SVTYPE=$SVTYPE -- END=$END < POS=$pos $svid"}
                    
                }
                
                close $f
            }
            
            # Writing:
            ##########
            puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)"
            if {$L_toWriteLoss ne {}} {
                WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
            }
            if {$L_toWriteGain ne {}} {
                WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
            }
            if {$L_toWriteIns ne {}} {
                WriteTextInFile [join $L_toWriteIns "\n"]  $benignInsFile_Tmp
            }
            if {$L_toWriteInv ne {}} {
                WriteTextInFile [join $L_toWriteInv "\n"]  $benignInvFile_Tmp
            }
            
            # Clean
            #######
            foreach gnomADfileDownloaded $gnomADfilesDownloaded {
                file delete -force $gnomADfileDownloaded
            }
        }
    }
    
    return
}

proc checkHPRC_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    if {$genomeBuild eq "GRCh38"} {
        ## Check if the GRCh38 PACBIO_HPRC SV file has been downloaded
        #############################################################
        set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/GRCh38"
        set HPRCfileDownloaded "$benignDir/hprc.GRCh38.pbsv.vcf.gz"
        
        if {[file exist $HPRCfileDownloaded]} {
            # We have some GRCh38 PACBIO HPRC annotations to add in $benign*File
            # Contains BND, DEL, DUP, INS and INV
            # FILTER = NearContigEnd, NearReferenceGap, NearReferenceGap;NearContigEnd or PASS
            
            if {[info exists g_AnnotSV(benignText)]} {
                puts $g_AnnotSV(benignText)
                unset g_AnnotSV(benignText)
            }
            puts "\t   >>> GRCh38 PACBIO HPRC parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
            
            removeOverlappedGenesBenignFiles $genomeBuild
            
            set benignLossFile_Tmp "$benignDir/benign_Loss_SV_GRCh38.tmp.bed"
            set benignGainFile_Tmp "$benignDir/benign_Gain_SV_GRCh38.tmp.bed"
            set benignInsFile_Tmp "$benignDir/benign_Ins_SV_GRCh38.tmp.bed"
            set benignInvFile_Tmp "$benignDir/benign_Inv_SV_GRCh38.tmp.bed"
            set L_toWriteLoss {}
            set L_toWriteGain {}
            set L_toWriteIns {}
            set L_toWriteInv {}
            
            # VCFs do not contain multiallelic sites (no need to split into multiple rows)
            set f [open "| gzip -cd $HPRCfileDownloaded"]
            while {![eof $f]} {
                set L [gets $f]
                if {[string index $L 0] eq "#" || $L eq ""} {continue}
                set Ls [split $L "\t"]
                
                set FILTER [lindex $Ls 6]
                if {$FILTER != "PASS"} {continue}
                
                set chrom [lindex $Ls 0]
                set pos [lindex $Ls 1]
                # From VCF to BED:
                if {$pos ne 0} {set pos [expr {$pos-1}]}
                
                set svid [lindex $Ls 2]
                
                catch {unset END}
                catch {unset SVTYPE}
                catch {unset AF}
                set L_infos [split [lindex $Ls 7] ";"]
                foreach inf $L_infos {
                    set inf [split $inf "="]
                    set val [lindex $inf 0]
                    set $val [lindex $inf 1]
                }
                if {![info exist END] || ![info exist SVTYPE] || ![info exist AF]} {continue}
                # Skip SVTYPE="BND"
                if {$SVTYPE eq "BND"} {continue}
                # Skip SV with AF < 5% (identified in < 6 individuals)
                if {$AF < 0.05} {continue}
                
                
                set coord "$chrom:${pos}-$END"
                set infos "$chrom\t$pos\t$END\tHPRC:$svid\t$coord\t[format "%.4f" $AF]"
                
                if {[regexp "DUP" $SVTYPE]} {
                    lappend L_toWriteGain "$infos"
                }
                if {[regexp "DEL" $SVTYPE]} {
                    lappend L_toWriteLoss "$infos"
                }
                if {[regexp "INS" $SVTYPE]} {
                    lappend L_toWriteIns "$infos"
                }
                if {$SVTYPE eq "INV"} {
                    lappend L_toWriteInv "$infos"
                }
                #if {$END eq $pos} {puts "WARNING: SVTYPE=$SVTYPE -- END=$END eq POS=$pos $svid"}
                #if {$END < $pos}  {puts "WARNING: SVTYPE=$SVTYPE -- END=$END < POS=$pos $svid"}
                
            }
            
            close $f
            
            # Writing:
            ##########
            puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)"
            if {$L_toWriteGain ne {}} {
                WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
            }
            if {$L_toWriteLoss ne {}} {
                WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
            }
            if {$L_toWriteIns ne {}} {
                WriteTextInFile [join $L_toWriteIns "\n"]  $benignInsFile_Tmp
            }
            if {$L_toWriteInv ne {}} {
                WriteTextInFile [join $L_toWriteInv "\n"]  $benignInvFile_Tmp
            }
            
            # Clean
            #######
            file delete -force $HPRCfileDownloaded
        }
        
    }
    
    return
}



proc checkDDD_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if DDD file has been downloaded
    ########################################
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
    set DDDfileDownloaded [glob -nocomplain "$benignDir/population_cnv_[string tolower $genomeBuild].txt.gz"]
    
    if {$DDDfileDownloaded ne ""} {
        # We have some DDD annotations to add in $benign*File
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild DDD parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        removeOverlappedGenesBenignFiles $genomeBuild
        
        set benignLossFile_Tmp "$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed"
        set benignGainFile_Tmp "$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed"
        set L_toWriteLoss {}
        set L_toWriteGain {}
        
        set f [open "| gzip -cd $DDDfileDownloaded"]
        while {! [eof $f]} {
            set L [gets $f]
            set Ls [split $L "\t"]
            
            # Header:
            #########
            # #population_cnv_id      chr     start   end     deletion_observations   deletion_frequency      deletion_standard_error duplication_observations        duplication_frequency   duplication_standard_error      observations     frequency       standard_error  type    sample_size     study
            
            if {[regexp  "^#population_cnv_id" $L]} {
                set i_id 0 ;# #population_cnv_id
                set i_chr      [lsearch -regexp $Ls "chr"];     if {$i_chr == -1} {puts "Bad syntax into $DDDfileDownloaded.\nchr field not found - Exit with error"; exit 2}
                set i_start    [lsearch -regexp $Ls "start"];   if {$i_start == -1} {puts "Bad syntax into $DDDfileDownloaded.\nstart field not found - Exit with error"; exit 2}
                set i_end      [lsearch -regexp $Ls "end"];     if {$i_end == -1} {puts "Bad syntax into $DDDfileDownloaded.\nend field not found - Exit with error"; exit 2}
                set i_delfreq  [lsearch -regexp $Ls "deletion_frequency"];    if {$i_delfreq == -1} {puts "Bad syntax into $DDDfileDownloaded.\ndeletion_frequency field not found - Exit with error"; exit 2}
                set i_dupfreq  [lsearch -regexp $Ls "duplication_frequency"]; if {$i_dupfreq == -1} {puts "Bad syntax into $DDDfileDownloaded.\nduplication_frequency field not found - Exit with error"; exit 2}
                set i_sample_size [lsearch -regexp $Ls "sample_size"];        if {$i_sample_size == -1} {puts "Bad syntax into $DDDfileDownloaded.\nsample_size field not found - Exit with error"; exit 2}
                continue
            }
            
            # Selection of the benign variants to keep:
            ###########################################
            set Ls [split $L "\t"]
            
            set sample_size [lindex $Ls $i_sample_size]
            # ≥ 500 individuals tested
            if {$sample_size < $g_AnnotSV(minTotalNumber)} {continue}
            # allele frequency > 0.1%
            set id "DDD:[lindex $Ls $i_id]"
            set chr [lindex $Ls $i_chr]
            set start [lindex $Ls $i_start]
            set end [lindex $Ls $i_end]
            set delfreq [lindex $Ls $i_delfreq]
            set dupfreq [lindex $Ls $i_dupfreq]
            set coord "$chr:${start}-$end"
            if {$delfreq > 0.001} {
                set infos "$chr\t$start\t$end\t$id\t$coord\t[format "%.4f" $delfreq]"
                lappend L_toWriteLoss "$infos"
            }
            if {$dupfreq > 0.001} {
                set infos "$chr\t$start\t$end\t$id\t$coord\t[format "%.4f" $dupfreq]"
                lappend L_toWriteGain "$infos"
            }
        }
        close $f
        
        # Writing:
        ##########
        puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain)"
        if {$L_toWriteLoss ne {}} {
            WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
        }
        if {$L_toWriteGain ne {}} {
            WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
        }
        
        # Clean:
        ########
        file delete -force $DDDfileDownloaded
    }
    
    return
}


proc check1000g_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if 1000g file has been downloaded
    ##########################################
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
    set 1000gFileDownloaded [glob -nocomplain "$benignDir/ALL.wgs.mergedSV*.vcf.gz"]
    
    if {$1000gFileDownloaded ne ""} {
        # We have some 1000g annotations to add in $benign*File
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild 1000g parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        removeOverlappedGenesBenignFiles $genomeBuild
        
        set benignLossFile_Tmp "$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed"
        set benignGainFile_Tmp "$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed"
        set benignInsFile_Tmp "$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed"
        set benignInvFile_Tmp "$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed"
        set L_toWriteLoss {}
        set L_toWriteGain {}
        set L_toWriteIns {}
        set L_toWriteInv {}
        
        # Split multiallelic sites into multiple rows:
        ##############################################
        regsub ".vcf.gz" $1000gFileDownloaded ".tmp.vcf" 1000gFileTmp
        catch {eval exec $g_AnnotSV(bcftools) norm -m -both $1000gFileDownloaded > $1000gFileTmp} Message
        if {[regexp -nocase "error|fail" $Message]} {
            # we continue AnnotSV without splitting the multiallelic sites !
            puts "\t   -- check1000g --"
            puts "\t   $g_AnnotSV(bcftools) norm -m -both $1000gFileDownloaded > $1000gFileTmp"
            foreach line [split $Message "\n"] {
                if {[regexp -nocase "error|fail" $line]} {puts "\t   $line"}
            }
            puts "\t   => No multiallelic treatment done."
            file delete -force $1000gFileTmp
        }
        
        # Selection of the benign variants to keep:
        ###########################################
        if {[file exists $1000gFileTmp]} {
            set f [open "$1000gFileTmp"]
        } else {
            set f [open "| gzip -cd $1000gFileDownloaded"]
        }
        while {![eof $f]} {
            set L [gets $f]
            if {[string index $L 0] eq "#" || $L eq ""} {continue}
            # Line example:
            # 1  645710  ALU_umary_ALU_2 A  <INS:ME:ALU>  .  .  AC=35;AF=0.00698882;AFR_AF=0;AMR_AF=0.0072;AN=5008;CS=ALU_umary;EAS_AF=0.0069;EUR_AF=0.0189;MEINFO=AluYa4_5,1,223,-;NS=2504;SAS_AF=0.0041;SITEPOST=0.9998;SVLEN=222;SVTYPE=ALU;TSD=null  GT  0|0  ...
            set Ls [split $L "\t"]
            
            set FILTER [lindex $Ls 6]
            if {$FILTER != "PASS"} {continue}
            
            set chrom [lindex $Ls 0]
            set pos [lindex $Ls 1]
            # From VCF to BED format:
            if {$pos ne 0} {set start [expr {$pos-1}]}
            set L_infos [split [lindex $Ls 7] ";"]
            set ref [lindex $Ls 3]
            set alt [lindex $Ls 4]
            # Consider only the SV (not the SNV/indel in the VCF file)
            ##########################################################
            # Example of SV:
            # - Type1: ref="G" and alt="ACTGCTAACGATCCGTTTGCTGCTAACGATCTAACGATCGGGATTGCTAACGATCTCGGG"
            # - Type2: "<INS>", "<DEL>", ...
            # - Type3: complex rearrangements with breakends: "G]17:1584563]"
            if {![regexp "<|\\\[|\\\]" $alt]} {
                set variantLength [expr {[string length $ref]-[string length $alt]}]
                if {[expr {abs($variantLength)}]<$g_AnnotSV(SVminSize)} {continue}; # it is not an SV
            }
            set max -1
            catch {unset AF}
            catch {unset END}
            set SVTYPE "CNV"
            foreach inf $L_infos {
                set inf [split $inf "="]
                set val [lindex $inf 0]
                set $val [lindex $inf 1]
                if {[regexp "AF$" $val]} {
                    if {[set $val]>$max} {set max [set $val]}
                }
            }
            # allele frequency > 0.1%
            if {$max < 0.001} {continue}
            
            if {![info exists END]} {
                # INS:ME (LINE1, ALU or SVA)
                set END [expr {$pos+1}]
            }
            # SVTYPE is defined in $L_infos
            # In case of a single value for "alt", SVTYPE is correctly defined (e.g. SVTYPE=DUP).
            # In case of multiple alt ("<CN0>,<CN2>"), SVTYPE has a unique value (often: SVTYPE=CNV)
            #   => We replace CNV with a more precise value <CN0> or <CNV2>
            if {$SVTYPE eq "CNV"} {set SVTYPE "$alt"}
            # Sometimes, we have "SVTYPE=DUP" and alt=<CN0>
            # or "SVTYPE=DEL" and alt=<CN2>
            # It's due to multiallelic sites. The good value is in "alt"
            if {[regexp "^<CN" $alt]} {
                set SVTYPE "$alt"
            }
            set coord "$chrom:${pos}-$END"
            set infos "$chrom\t$pos\t$END\t1000g\t$coord\t[format "%.4f" $max]"
            
            if {[regexp "<CN0>|DEL" $SVTYPE]} {
                lappend L_toWriteLoss "$infos"
            }
            if {[regexp "<CN\[1-9\]|ALU|LINE1|SVA" $SVTYPE]} {
                lappend L_toWriteGain "$infos"
            }
            if {$SVTYPE eq "INS"} {
                lappend L_toWriteIns "$infos"
            }
            if {$SVTYPE eq "INV"} {
                lappend L_toWriteInv "$infos"
            }
        }
        
        close $f
        
        # Writing:
        ##########
        puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)"
        if {$L_toWriteLoss ne {}} {
            WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
        }
        if {$L_toWriteGain ne {}} {
            WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
        }
        if {$L_toWriteIns ne {}} {
            WriteTextInFile [join $L_toWriteIns "\n"]  $benignInsFile_Tmp
        }
        if {$L_toWriteInv ne {}} {
            WriteTextInFile [join $L_toWriteInv "\n"]  $benignInvFile_Tmp
        }
        
        # Clean:
        ########
        file delete -force $1000gFileDownloaded
        file delete -force $1000gFileTmp
    }
    
    return
}

proc checkdbVar_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if dbVar SV files (del, dup or ins) have been downloaded
    #################################################################
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
    set L_toWriteLoss {}
    set L_toWriteGain {}
    set L_toWriteIns {}
    
    # Deletions
    set dbVarDelFileDownloaded "$benignDir/$genomeBuild.nr_deletions.common.bed.gz"
    if {[file exists $dbVarDelFileDownloaded]} {
        # We have some dbVar annotations to add in benign file
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild deletion dbVar parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        removeOverlappedGenesBenignFiles $genomeBuild
        
        set benignLossFile_Tmp "$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed"
        set f [open "| gzip -cd $dbVarDelFileDownloaded"]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            set chrom [lindex $Ls 0]
            set start [lindex $Ls 1]
            set end [lindex $Ls 2]
            set coord "$chrom:${start}-$end"
            set infos "$chrom\t$start\t$end\tdbVar\t$coord\t0.01" ;# WARNING: As the frequency of these common variants is not given, it is assigned to 1% (minimum value of the AF in the curated dataset)
            lappend L_toWriteLoss "$infos"
        }
        close $f
        puts "\t       ([llength $L_toWriteLoss] SV Loss)"
    }
    
    # Duplications
    set dbVarDupFileDownloaded "$benignDir/$genomeBuild.nr_duplications.common.bed.gz"
    if {[file exists $dbVarDupFileDownloaded]} {
        # We have some dbVar annotations to add in benign file
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild duplication dbVar parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        set benignGainFile_Tmp "$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed"
        set f [open "| gzip -cd $dbVarDupFileDownloaded"]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            set chrom [lindex $Ls 0]
            set start [lindex $Ls 1]
            set end [lindex $Ls 2]
            set coord "$chrom:${start}-$end"
            set infos "$chrom\t$start\t$end\tdbVar\t$coord\t0.01" ;# WARNING: As the frequency of these common variants is not given, it is assigned to 1% (minimum value of the AF in the curated dataset)
            lappend L_toWriteGain "$infos"
        }
        close $f
        puts "\t       ([llength $L_toWriteGain] SV Gain)"
    }
    
    # Insertions
    set dbVarInsFileDownloaded "$benignDir/$genomeBuild.nr_insertions.common.bed.gz"
    if {[file exists $dbVarInsFileDownloaded]} {
        # We have some dbVar annotations to add in benign file
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild insertion dbVar parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        set benignInsFile_Tmp "$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed"
        set f [open "| gzip -cd $dbVarInsFileDownloaded"]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            set chrom [lindex $Ls 0]
            set start [lindex $Ls 1]
            set end [lindex $Ls 2]
            set coord "$chrom:${start}-$end"
            set infos "$chrom\t$start\t$end\tdbVar\t$coord\t0.01" ;# WARNING: As the frequency of these common variants is not given, it is assigned to 1% (minimum value of the AF in the curated dataset)
            lappend L_toWriteIns "$infos"
        }
        close $f
        puts "\t       ([llength $L_toWriteIns] SV INS)"
    }
    
    # Writing:
    ##########
    if {$L_toWriteLoss ne {}} {
        WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
        file delete -force $dbVarDelFileDownloaded
    }
    if {$L_toWriteGain ne {}} {
        WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
        file delete -force $dbVarDupFileDownloaded
    }
    if {$L_toWriteIns ne {}} {
        WriteTextInFile [join $L_toWriteIns "\n"]  $benignInsFile_Tmp
        file delete -force $dbVarInsFileDownloaded
    }
    
    return
}

proc checkIMH_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if IMH file has been downloaded
    ########################################
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
    set IMHfileDownloaded [glob -nocomplain "$benignDir/*callset.public.bedpe.gz"]
    
    if {$IMHfileDownloaded ne ""} {
        # We have some IMH annotations to add in $benign*File
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild IMH parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        removeOverlappedGenesBenignFiles $genomeBuild
        
        set benignLossFile_Tmp "$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed"
        set benignGainFile_Tmp "$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed"
        set benignInsFile_Tmp "$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed"
        set benignInvFile_Tmp "$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed"
        set L_toWriteLoss {}
        set L_toWriteGain {}
        set L_toWriteIns {}
        set L_toWriteInv {}
        
        set f [open "| gzip -cd $IMHfileDownloaded"]
        while {![eof $f]} {
            set L [gets $f]
            # Header(bedpe):
            ################
            #CHROM_A        START_A END_A   CHROM_B START_B END_B   ID      QUAL    STRAND_A        STRAND_B        TYPE    FILTER  NAME_A  REF_A   ALT_A   NAME_B  REF_B   ALT_B   INFO_A  INFO_B
            #1       10361   10590   15      102520301       102520447       2838    47911.3 -       -       BND     LOW     2838_1  N       [15:102520406[N 2838_2  N       [1:10567[N      SVTYPE=BND;POS=10567;STRANDS=--:97;IMPRECISE;CIPOS=-205,24;CIEND=-104,42;CIPOS95=-20,20;CIEND95=-6,6;MATEID=2838_2;EVENT=2838;SU=97;PE=97;SR=0;ALG=PROD;AF=0.07568;NSAMP=1274;MSQ=37.02;AN=16834;AC=1274;NS=8438;AC_Hom=0;AC_Het=1275;AC_Hemi=0;MAF=0.0755511;HWE=4.03332e-23;NFAM=1263     SVTYPE=BND;POS=102520406;STRANDS=--:97;IMPRECISE;CIPOS=-104,42;CIEND=-205,24;CIPOS95=-6,6;CIEND95=-20,20;MATEID=2838_1;EVENT=2838;SECONDARY;SU=97;PE=97;SR=0;ALG=PROD;AF=0.07568;NSAMP=1274;MSQ=37.02;AN=16834;AC=1274;NS=8438;AC_Hom=0;AC_Het=1275;AC_Hemi=0;MAF=0.0755511;HWE=4.03332e-23;NFAM=1263
            set Ls [split $L "\t"]
            if {[regexp  "^#CHROM_A" $L]} {
                set i_chrA 0 ;# #CHROM_A
                set i_chrB [lsearch -regexp $Ls "CHROM_B"]; if {$i_chrB == -1} {puts "Bad syntax into $IMHfileDownloaded.\nCHROM_B field not found - Exit with error"; exit 2}
                set i_start [lsearch -regexp $Ls "START_A"]; if {$i_start == -1} {puts "Bad syntax into $IMHfileDownloaded.\nSTART_A field not found - Exit with error"; exit 2}
                set i_end [lsearch -regexp $Ls "END_B"]; if {$i_end == -1} {puts "Bad syntax into $IMHfileDownloaded.\nEND_B field not found - Exit with error"; exit 2}
                set i_svtype [lsearch -regexp $Ls "TYPE"]; if {$i_svtype == -1} {puts "Bad syntax into $IMHfileDownloaded.\nTYPE field not found - Exit with error"; exit 2}
                set i_annotations [lsearch -regexp $Ls "INFO_A"]; if {$i_annotations == -1} {puts "Bad syntax into $IMHfileDownloaded.\nINFO_A field not found - Exit with error"; exit 2}
            }
            if {[string index $L 0] eq "#" || $L eq ""} {continue}
            
            # Selection of the benign variants to keep:
            ###########################################
            regsub "chr" [lindex $Ls $i_chrA] "" chromA
            regsub "chr" [lindex $Ls $i_chrB] "" chromB
            if {$chromA ne $chromB} {continue}
            set Annotations [lindex $Ls $i_annotations]
            if {![regexp ";AF=(.+?);" $Annotations match AF]} {continue}
            if {$AF < 0.001} {continue}
            set start  [lindex $Ls $i_start]
            set end    [lindex $Ls $i_end]
            set SVTYPE [normalizeSVtype [lindex $Ls $i_svtype]]
            set coord "$chromA:${start}-$end"
            set infos "$chromA\t$start\t$end\tIMH\t$coord\t[format "%.4f" $AF]"
            
            if {$SVTYPE eq "DEL"} {
                lappend L_toWriteLoss "$infos"
            }
            if {$SVTYPE eq "DUP"} {
                lappend L_toWriteGain "$infos"
            }
            if {$SVTYPE eq "INS"} {
                lappend L_toWriteIns "$infos"
            }
            if {$SVTYPE eq "INV"} {
                lappend L_toWriteInv "$infos"
            }
        }
        close $f
        
        # Writing:
        ##########
        puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)"
        
        if {$L_toWriteLoss ne {}} {
            WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
        }
        if {$L_toWriteGain ne {}} {
            WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
        }
        if {$L_toWriteIns ne {}} {
            WriteTextInFile [join $L_toWriteIns "\n"]  $benignInsFile_Tmp
        }
        if {$L_toWriteInv ne {}} {
            WriteTextInFile [join $L_toWriteInv "\n"]  $benignInvFile_Tmp
        }
        # Clean:
        ########
        file delete -force $IMHfileDownloaded
        file delete -force [glob -nocomplain "Build*.public.v2.vcf.gz"]
        file delete -force [glob -nocomplain "Supplementary_File_*.zip"]
    }
    
    return
}



proc checkCMRI_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if CMRI file has been downloaded
    ############################################
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
    set CMRIfileDownloaded [lindex [glob -nocomplain "$benignDir/pb_joint_merged.sv.vcf"] end]
    
    if {$CMRIfileDownloaded ne ""} {
        # We have some CMRI annotations to add in $benign*File
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild CMRI parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        removeOverlappedGenesBenignFiles $genomeBuild
        
        set benignLossFile_Tmp "$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed"
        set benignGainFile_Tmp "$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed"
        set benignInsFile_Tmp "$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed"
        set benignInvFile_Tmp "$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed"
        set L_toWriteLoss {}
        set L_toWriteGain {}
        set L_toWriteIns {}
        set L_toWriteInv {}
        set f [open "$CMRIfileDownloaded"]
        while {! [eof $f]} {
            set L [gets $f]
            set Ls [split $L "\t"]
            if {[regexp "^#" $L]} {continue}
            set infos [lindex $Ls 7]
            
            # Selection of the benign variants to keep:
            ###########################################
            # Criteria:
            # - ≥ 500 individuals tested
            # - ≥ $g_AnnotSV(SVminSize) bp in size (default 50)
            # - Allele frequency [0.001-0.1]
            # - "DUP”, “DEL”, “INS” or “INV” SV type
            if {![regexp "END=(\[^;\]+)?;.*SVTYPE=(\[^;\]+)?;.*SVLEN=(\[^;\]+)?;.*SVN=(\[^;\]+)?;.*SVF=(\[^;\]+)?" $infos match end svtype svlen totalcount freq]} {continue}
            if {$totalcount < 500} {continue}
            if {[expr abs($svlen)] < $g_AnnotSV(SVminSize)} {continue}
            if {$freq < 0.001} {continue}
            regsub "chr" [lindex $Ls 0] "" chrom
            set start [lindex $Ls 1]
            # From VCF to BED format:
            if {$start ne 0} {set start [expr {$start-1}]}
            set id    [lindex $Ls 2]
            set ref   [lindex $Ls 3]
            set alt   [lindex $Ls 4]
            set coord "${chrom}:${start}-$end"
            if {$end eq $start} {set end [expr {$start+1}]}
            if {$end < $start} {set i $start; set start $end; set end $i}
            
            if {$svtype eq "DEL"} {
                lappend L_toWriteLoss "$chrom\t$start\t$end\tCMRI:$id\t$coord\t[format "%.4f" $freq]"
            } elseif {$svtype eq "DUP"} {
                lappend L_toWriteGain "$chrom\t$start\t$end\tCMRI:$id\t$coord\t[format "%.4f" $freq]"
            } elseif {$svtype eq "INS"} {
                lappend L_toWriteIns "$chrom\t$start\t$end\tCMRI:$id\t$coord\t[format "%.4f" $freq]"
            } elseif {$svtype eq "INV"} {
                lappend L_toWriteInv "$chrom\t$start\t$end\tCMRI:$id\t$coord\t[format "%.4f" $freq]"
            }
        }
        close $f
        
        # Writing:
        ##########
        puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)"
        if {$L_toWriteLoss ne {}} {
            WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
        }
        if {$L_toWriteGain ne {}} {
            WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
        }
        if {$L_toWriteIns ne {}} {
            WriteTextInFile [join $L_toWriteIns "\n"]  $benignInsFile_Tmp
        }
        if {$L_toWriteInv ne {}} {
            WriteTextInFile [join $L_toWriteInv "\n"]  $benignInvFile_Tmp
        }
        
        # Clean:
        ########
        file delete -force $CMRIfileDownloaded
    }
    
    return
}


proc checkPacBioCoLoRS_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if  file has been downloaded
    ############################################
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
    set PacBioCoLoRSfileDownloaded [lindex [glob -nocomplain "$benignDir/CoLoRSdb.$genomeBuild.v1.0.0.pbsv.jasmine.vcf.gz"] end]
    
    if {$PacBioCoLoRSfileDownloaded ne ""} {
        # We have some PacBioCoLoRS annotations to add in $benign*File
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild PacBioCoLoRS parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        removeOverlappedGenesBenignFiles $genomeBuild
        
        set benignLossFile_Tmp "$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed"
        set benignInsFile_Tmp "$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed"
        set benignInvFile_Tmp "$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed"
        set L_toWriteLoss {}
        set L_toWriteIns {}
        set L_toWriteInv {}
        set f [open "| gzip -cd $PacBioCoLoRSfileDownloaded"]
        while {! [eof $f]} {
            set L [gets $f]
            set Ls [split $L "\t"]
            if {[regexp "^#" $L]} {continue}
            set infos [lindex $Ls 7]
            
            # Selection of the benign variants to keep:
            ###########################################
            # Criteria:
            # - AN ≥ 500
            # - DEL and INV ≥ $g_AnnotSV(SVminSize) bp in size (default 50)
            # - AF > 0.05
            # - “DEL”, “INS” or “INV” SV type
            # Example line: SVTYPE=DEL;END=3210;SVLEN=-42;AC=79;AN=2762;NS=1381;AF=0.0286025;AC_Het=55;AC_Hom=24;AC_Hemi=0;HWE=1.153
            if {![regexp "SVTYPE=(\[^;\]+)?;END=(\[^;\]+)?;.*SVLEN=(\[^;\]+)?;.*AN=(\[^;\]+)?;.*AF=(\[^;\]+)?" $infos match svtype end svlen totalcount freq]} {continue}
            if {$totalcount < 500} {continue}
            if {[expr abs($svlen)] < $g_AnnotSV(SVminSize)} {continue}
            if {$freq < 0.05} {continue}
            regsub "chr" [lindex $Ls 0] "" chrom
            set start [lindex $Ls 1]
            # From VCF to BED format:
            if {$start ne 0} {set start [expr {$start-1}]}
            set ref   [lindex $Ls 3]
            set alt   [lindex $Ls 4]
            set coord "${chrom}:${start}-$end"
            if {$end eq $start} {set end [expr {$start+1}]}
            if {$end < $start} {set i $start; set start $end; set end $i}
            
            
            if {$svtype eq "DEL"} {
                lappend L_toWriteLoss "$chrom\t$start\t$end\tPacBioCoLoRS\t$coord\t[format "%.4f" $freq]"
            } elseif {$svtype eq "INS"} {
                lappend L_toWriteIns "$chrom\t$start\t$end\tPacBioCoLoRS\t$coord\t[format "%.4f" $freq]"
            } elseif {$svtype eq "INV"} {
                lappend L_toWriteInv "$chrom\t$start\t$end\tPacBioCoLoRS\t$coord\t[format "%.4f" $freq]"
            }
        }
        close $f
        
        # Writing:
        ##########
        puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)"
        if {$L_toWriteLoss ne {}} {
            WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
        }
        if {$L_toWriteIns ne {}} {
            WriteTextInFile [join $L_toWriteIns "\n"]  $benignInsFile_Tmp
        }
        if {$L_toWriteInv ne {}} {
            WriteTextInFile [join $L_toWriteInv "\n"]  $benignInvFile_Tmp
        }
        
        # Clean:
        ########
        file delete -force $PacBioCoLoRSfileDownloaded
    }
    
    return
}


proc checkFGR_benignFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if FGR file has been downloaded
    ########################################
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild"
    set FGRfileDownloaded [glob -nocomplain "$benignDir/FGR_benign_*_SV_$genomeBuild.bed"]
    
    
    ## Writing
    ##########
    if {$FGRfileDownloaded ne ""} {
        # We have some FGR annotations to add in $benign*File
        if {[info exists g_AnnotSV(benignText)]} {
            puts $g_AnnotSV(benignText)
            unset g_AnnotSV(benignText)
        }
        puts "\t   >>> $genomeBuild FGR parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        removeOverlappedGenesBenignFiles $genomeBuild
        
        set benignLossFile_Tmp "$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed"
        set benignGainFile_Tmp "$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed"
        set benignInsFile_Tmp "$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed"
        set benignInvFile_Tmp "$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed"
        
        if {[file exist "$benignDir/FGR_benign_Gain_SV_$genomeBuild.bed"]} {
            set L_toWriteGain [LinesFromFile "$benignDir/FGR_benign_Gain_SV_$genomeBuild.bed"]
            set nGain [llength $L_toWriteGain]
            WriteTextInFile [join $L_toWriteGain "\n"] $benignGainFile_Tmp
        }
        if {[file exist "$benignDir/FGR_benign_Loss_SV_$genomeBuild.bed"]} {
            set L_toWriteLoss [LinesFromFile "$benignDir/FGR_benign_Loss_SV_$genomeBuild.bed"]
            set nLoss [llength $L_toWriteLoss]
            WriteTextInFile [join $L_toWriteLoss "\n"] $benignLossFile_Tmp
        }
        if {[file exist "$benignDir/FGR_benign_Ins_SV_$genomeBuild.bed"]} {
            set L_toWriteIns [LinesFromFile "$benignDir/FGR_benign_Ins_SV_$genomeBuild.bed"]
            set nIns [llength $L_toWriteIns]
            WriteTextInFile [join $L_toWriteIns "\n"] $benignInsFile_Tmp
        }
        if {[file exist "$benignDir/FGR_benign_Inv_SV_$genomeBuild.bed"]} {
            set L_toWriteInv [LinesFromFile "$benignDir/FGR_benign_Inv_SV_$genomeBuild.bed"]
            set nInv [llength $L_toWriteInv]
            WriteTextInFile [join $L_toWriteInv "\n"] $benignInvFile_Tmp
        }
        
        puts "\t       ($nLoss SV Loss + $nGain SV Gain)"
        puts "\t       ($nIns INS + $nInv INV)"
        
        # Clean:
        ########
        foreach f $FGRfileDownloaded {
            file delete -force $f
        }
        
    }
    
    return
}

#########################################################################################################################################################################
#########################################################################################################################################################################
#########################################################################################################################################################################




# Return the completely overlapped SV annotation
proc benignSVannotation {SVchrom SVstart SVend} {
    
    global g_AnnotSV
    global benignText
    
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$g_AnnotSV(genomeBuild)"
    
    if {![info exists benignText(DONE)]} {
        # headerOutput "B_gain_source B_gain_coord B_gain_AFmax B_loss_source B_loss_coord B_loss_AFmax"
        # + (if user selected) "B_ins_source B_ins_coord B_ins_AFmax B_inv_source B_inv_coord B_inv_AFmax"
        
        set L_benignText(Empty) {}
        foreach svtype {"gain" "loss" "ins" "inv"} {
            # Keep only the user requested columns (defined in the configfile)
            if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^B_${svtype}_"] eq -1} { continue }
            lappend L_benignText(Empty) {*}{"" "" ""}
        }
        set benignText(Empty) "[join $L_benignText(Empty) "\t"]"
        
        foreach svtype {"Gain" "Loss" "Ins" "Inv"} {
            
            # Keep only the user requested columns (defined in the configfile)
            if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^B_[string tolower ${svtype}]_"] eq -1} { continue }
            
            # Intersect
            set benignBEDfile [glob -nocomplain "$benignDir/benign_${svtype}_SV_$g_AnnotSV(genomeBuild).sorted.bed"]
            regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.benign-$svtype" tmpFile
            set tmpFile "$g_AnnotSV(outputDir)/[file tail $tmpFile]"
            file delete -force $tmpFile
            # -f 1.0 : the feature in B overlaps at least 100% of the A feature.
            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(fullAndSplitBedFile) -b $benignBEDfile -f 1.0 -wa -wb > $tmpFile} Message]} {
                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(fullAndSplitBedFile) -b $benignBEDfile -f 1.0 -wa -wb > $tmpFile} Message]} {
                    puts "-- benignSVAnnotation, $svtype --"
                    puts "$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(fullAndSplitBedFile) -b $benignBEDfile -f 1.0 -wa -wb > $tmpFile"
                    puts "$Message"
                    puts "Exit with error"
                    exit 2
                }
            }
            
            # Parse
            set f [open $tmpFile]
            while {![eof $f]} {
                set L [gets $f]
                if {$L eq ""} {continue}
                set Ls [split $L "\t"]
                
                set SVtoAnn_chrom [lindex $Ls 0]
                set SVtoAnn_start [lindex $Ls 1]
                set SVtoAnn_end   [lindex $Ls 2]
                
                set benign_AF [lindex $Ls end]
                # An SV is considered benign if its allele frequency > $g_AnnotSV(benignAF)
                # (default 0.01)
                if {[string is double $benign_AF] && $benign_AF < $g_AnnotSV(benignAF)} {continue}
                set benign_coord [lindex $Ls end-1]
                set benign_source [lindex $Ls end-2]
                
                set SVtoAnn "$SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end"
                lappend L_allSVtoAnn $SVtoAnn
                lappend L_benign_coord($SVtoAnn,$svtype) $benign_coord
                lappend L_benign_source($SVtoAnn,$svtype) $benign_source
                if {![info exists L_benign_AF($SVtoAnn,$svtype)]} {
                    if {[string is double $benign_AF]} {
                        set L_benign_AF($SVtoAnn,$svtype) "$benign_AF"
                    } else {
                        set L_benign_AF($SVtoAnn,$svtype) ""
                    }
                } else {
                    if {[string is double $benign_AF] && $benign_AF > $L_benign_AF($SVtoAnn,$svtype)} {
                        set L_benign_AF($SVtoAnn,$svtype) "$benign_AF"
                    }
                }
            }
            file delete -force $tmpFile
        }
        
        # Loading benign final annotation for each SV
        if {[info exists L_allSVtoAnn]} {
            foreach SVtoAnn [lsort -unique $L_allSVtoAnn] {
                
                foreach svtype {"Gain" "Loss" "Ins" "Inv"} {
                    
                    # Keep only the user requested columns (defined in the configfile)
                    if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^B_[string tolower ${svtype}]_"] eq -1} { continue }
                    
                    if {[info exists L_benign_coord($SVtoAnn,$svtype)]} {
                        lappend L_benignText($SVtoAnn) "[join [lsort -unique $L_benign_source($SVtoAnn,$svtype)] ";"]"
                        lappend L_benignText($SVtoAnn) "[join $L_benign_coord($SVtoAnn,$svtype) ";"]"
                        if {[set g_AnnotSV(metrics)] eq "fr"} {
                            # Change metrics from "." to ","
                            # We remove the exponential nomenclature: [expr {9.9443e-01}] = 0.99443
                            catch {regsub -all {\.} [expr {$L_benign_AF($SVtoAnn,$svtype)}] "," L_benign_AF($SVtoAnn,$svtype)}
                        }
                        lappend L_benignText($SVtoAnn) "$L_benign_AF($SVtoAnn,$svtype)"
                    } else {
                        lappend L_benignText($SVtoAnn) ""
                        lappend L_benignText($SVtoAnn) ""
                        lappend L_benignText($SVtoAnn) ""
                    }
                }
                set benignText($SVtoAnn) [join $L_benignText($SVtoAnn) "\t"]
            }
        }
        set benignText(DONE) 1
    }
    
    if {[info exist benignText($SVchrom,$SVstart,$SVend)]} {
        return $benignText($SVchrom,$SVstart,$SVend)
    } else {
        return $benignText(Empty)
    }
}


# Return the PARTIALLY overlapped (po) benign SV annotation for the full lines
# (nothing done for the split lines)
# headerOutput: po_B_gain_allG_source po_B_gain_allG_coord po_B_gain_someG_source po_B_gain_someG_coord
#               po_B_gain_loss_source po_B_loss_allG_coord po_B_loss_someG_source po_B_loss_someG_coord
proc poBenignSVannotation {SVchrom SVstart SVend L_GenesSVtoAnnotate} {
    
    global g_AnnotSV
    global poBenignIntersectDone
    global L_genes
    global benignCoordSource
    
    
    set SVtoAnn "$SVchrom,$SVstart,$SVend"
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$g_AnnotSV(genomeBuild)"
    
    if {![info exists poBenignIntersectDone]} {
        
        foreach svtype {"Gain" "Loss"} {
            # Keep only the user requested columns (defined in the configfile)
            if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^po_B_[string tolower ${svtype}]_"] eq -1} { continue }
            
            # List the genes overlapping with the benign SV
            # (benign SV without overlapped genes are not listed)
            set overlappedGenes_in_benign${svtype}File "$benignDir/overlappedGenes_${g_AnnotSV(tx)}_in_benign_${svtype}_SV_${g_AnnotSV(genomeBuild)}.tsv"
            foreach L [LinesFromFile [set overlappedGenes_in_benign${svtype}File]] {
                set coordBenignSV [lindex $L 0] ;# e.g. 16:47182577-47188882
                lappend L_genes($coordBenignSV) [lindex $L 1]
            }
            
            # Intersect
            set benignBEDfile [glob -nocomplain "$benignDir/benign_${svtype}_SV_$g_AnnotSV(genomeBuild).sorted.bed"]
            regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.po_benign-$svtype" tmpFile
            set tmpFile "$g_AnnotSV(outputDir)/[file tail $tmpFile]"
            file delete -force $tmpFile
            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $benignBEDfile -wa -wb > $tmpFile} Message]} {
                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(bedFile) -b $benignBEDfile -wa -wb > $tmpFile} Message]} {
                    puts "-- benignSVAnnotation, $svtype --"
                    puts "$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $benignBEDfile -wa -wb > $tmpFile"
                    puts "$Message"
                    puts "Exit with error"
                    exit 2
                }
            }
            
            # Parse intersect file
            set f [open $tmpFile]
            while {![eof $f]} {
                set L [gets $f]
                if {$L eq ""} {continue}
                set Ls [split $L "\t"]
                
                set SVtoAnn_chrom [lindex $Ls 0]
                set SVtoAnn_start [lindex $Ls 1]
                set SVtoAnn_end   [lindex $Ls 2]
                
                # An SV is considered benign if its allele frequency > $g_AnnotSV(benignAF)
                # (default 0.01)
                set benign_AF [lindex $Ls end]
                if {[string is double $benign_AF] && $benign_AF < $g_AnnotSV(benignAF)} {continue}
                
                set benign_coord [lindex $Ls end-1] ;# e.g. 16:47182577-47188882
                set benign_source [lindex $Ls end-2]
                
                lappend benignCoordSource($SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end,$svtype) "$benign_coord $benign_source"
            }
            close $f
        }
        set poBenignIntersectDone 1
    }
    
    # Annotations
    foreach svtype {"Gain" "Loss"} {
        
        # Keep only the user requested columns (defined in the configfile)
        if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^po_B_[string tolower ${svtype}]_"] eq -1} { continue }
        
        if {[info exists benignCoordSource($SVtoAnn,$svtype)]} {
            foreach {benign_coord benign_source} $benignCoordSource($SVtoAnn,$svtype) {
                # benign_coord: 16:47182577-47188882
                if {[info exists L_genes($benign_coord)]} {
                    set allG 1
                    foreach gN [split $L_GenesSVtoAnnotate ";"] {
                        if {![regexp $gN [split $L_genes($benign_coord) ";"]]} {
                            set allG 0
                            break
                        }
                    }
                    if {$allG} {
                        lappend L_benign_coord($SVtoAnn,$svtype,allG) $benign_coord
                        lappend L_benign_source($SVtoAnn,$svtype,allG) $benign_source
                    } else {
                        lappend L_benign_coord($SVtoAnn,$svtype,someG) $benign_coord
                        lappend L_benign_source($SVtoAnn,$svtype,someG) $benign_source
                    }
                } else {
                    lappend L_benign_coord($SVtoAnn,$svtype,someG) $benign_coord
                    lappend L_benign_source($SVtoAnn,$svtype,someG) $benign_source
                }
            }
        }
        
        # Loading benign final annotation for each SV
        # (AnnotSV restricts the number of overlapping reported features to 20)
        if {[info exists L_benign_coord($SVtoAnn,$svtype,allG)]} {
            if {[llength $L_benign_source($SVtoAnn,$svtype,allG)] > 20} {
                lappend L_poBenignText($SVtoAnn) "[join [lrange $L_benign_source($SVtoAnn,$svtype,allG) 0 19] ";"]..."
                lappend L_poBenignText($SVtoAnn) "[join [lrange $L_benign_coord($SVtoAnn,$svtype,allG) 0 19] ";"]..."
            } else {
                lappend L_poBenignText($SVtoAnn) "[join $L_benign_source($SVtoAnn,$svtype,allG) ";"]"
                lappend L_poBenignText($SVtoAnn) "[join $L_benign_coord($SVtoAnn,$svtype,allG) ";"]"
            }
        } else {
            lappend L_poBenignText($SVtoAnn) ""
            lappend L_poBenignText($SVtoAnn) ""
        }
        if {[info exists L_benign_coord($SVtoAnn,$svtype,someG)]} {
            if {[llength $L_benign_source($SVtoAnn,$svtype,someG)] > 20} {
                lappend L_poBenignText($SVtoAnn) "[join [lrange $L_benign_source($SVtoAnn,$svtype,someG) 0 19] ";"]..."
                lappend L_poBenignText($SVtoAnn) "[join [lrange $L_benign_coord($SVtoAnn,$svtype,someG) 0 19] ";"]..."
            } else {
                lappend L_poBenignText($SVtoAnn) "[join $L_benign_source($SVtoAnn,$svtype,someG) ";"]"
                lappend L_poBenignText($SVtoAnn) "[join $L_benign_coord($SVtoAnn,$svtype,someG) ";"]"
            }
        } else {
            lappend L_poBenignText($SVtoAnn) ""
            lappend L_poBenignText($SVtoAnn) ""
        }
    }
    
    if {[info exist L_poBenignText($SVtoAnn)]} {
        set poBenignText($SVtoAnn) [join $L_poBenignText($SVtoAnn) "\t"]
    } else {
        set poBenignText($SVtoAnn) ""
    }
    
    return $poBenignText($SVchrom,$SVstart,$SVend)
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-candidategenes.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################

proc isCandidate {gene} {
    global g_AnnotSV
    global g_candidate
    
    if {![info exists g_candidate(DONE)]} {
        set g_candidate(DONE) 1
        
        # List of the candidate genes (given by the user)
        set L_Candidates ""
        if {$g_AnnotSV(candidateGenesFile) ne ""} {
            set f [open $g_AnnotSV(candidateGenesFile)]
            while {![eof $f]} {
                set L [gets $f]
                lappend L_Candidates {*}[split $L " |\n|\t"]
            }
            close $f
        }
        foreach g $L_Candidates {
            set g_candidate($g) 1
        }
    }
    
    if {[info exists g_candidate($gene)]} {
        return 1
    } else {
        return 0
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-clingen.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


# ClinGenFileDownloaded:
########################
# ftp://ftp.clinicalgenome.org/ClinGen_gene_curation_list_GRCh37.tsv
# Some genes are on chrom X AND chrom Y:
# CSF2RA  1438    Xp22.33 and Yp11.2      chrX:1387693-1428828    30      Gene associated with autosomal recessive phenotype       0       No evidence available       2021-08-23       MONDO:0012580
# CSF2RA  1438    Xp22.33 and Yp11.2      chrY:1268814-1325218    30      Gene associated with autosomal recessive phenotype       0       No evidence available       2021-08-23       MONDO:0012580
# => be carreful to avoid redundancy


## - Check if the "ClinGen_gene_curation_list_GRCh37.tsv" file exists.
## - Check and create if necessary the 'date'_ClinGenAnnotations.tsv file.
proc checkClinGenFile {} {
    
    global g_AnnotSV
    
    
    set clingenDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/ClinGen"
    
    ## Check if the ClinGen file has been downloaded the formatted
    ##############################################################
    set ClinGenFileDownloaded [glob -nocomplain "$clingenDir/ClinGen_gene_curation_list_*.tsv"]
    set ClinGenFileFormattedGzip [glob -nocomplain "$clingenDir/*_ClinGenAnnotations.tsv.gz"]
    
    if {$ClinGenFileDownloaded eq "" && $ClinGenFileFormattedGzip eq ""} {
        # No ClinGene annotation
        return
    }
    
    if {[llength $ClinGenFileFormattedGzip]>1} {
        puts "Several ClinGen files exist:"
        puts "$ClinGenFileFormattedGzip"
        puts "Keep only one: [lindex $ClinGenFileFormattedGzip end]\n"
        foreach ClinGenF [lrange $ClinGenFileFormattedGzip 0 end-1] {
            file rename -force $ClinGenF $ClinGenF.notused
        }
        return
    }
    if {$ClinGenFileFormattedGzip eq ""} {
        ## - Create the 'date'_ClinGenAnnotations.tsv file.
        ##   Header: genes, HI and TS
        
        set ClinGenFileFormatted "$clingenDir/[clock format [clock seconds] -format "%Y%m%d"]_ClinGenAnnotations.tsv"
        puts "...creation of $ClinGenFileFormatted.gz ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])\n"
        ReplaceTextInFile "genes\tHI\tTS" $ClinGenFileFormatted
        
        # Parsing of $ClinGenFileDownloaded
        foreach L [LinesFromFile $ClinGenFileDownloaded] {
            set Ls [split $L "\t"]
            
            if {[regexp "^#Gene Symbol" $L]} {
                set i_gene [lsearch -exact $Ls "#Gene Symbol"];             if {$i_gene == -1} {puts "Bad header line syntax. Gene Symbol column not found - Exit with error"; exit 2}
                set i_HI   [lsearch -exact $Ls "Haploinsufficiency Score"]; if {$i_HI == -1} {puts "Bad header line syntax. Haploinsufficiency Score column not found - Exit with error"; exit 2}
                set i_TS   [lsearch -exact $Ls "Triplosensitivity Score"];  if {$i_TS == -1} {puts "Bad header line syntax. Triplosensitivity Score column not found - Exit with error"; exit 2}
                continue
            }
            if {[regexp "^#" $L]} {continue}
            
            set gene [lindex $Ls $i_gene]
            set HI [lindex $Ls $i_HI]
            set TS [lindex $Ls $i_TS]
            
            # To avoir redundancy for genes (CSF2RA and VAMP7) presents on chrom X AND chrom Y
            if {[info exists seen($gene)]} {continue}
            set seen($gene) 1
            
            if {$HI eq "Not yet evaluated"} {set HI ""}
            if {$TS eq "Not yet evaluated"} {set TS ""}
            
            lappend L_Texte "$gene\t$HI\t$TS"
        }
        
        # creation of $ClinGenFileFormatted.gz
        WriteTextInFile "[join $L_Texte "\n"]" $ClinGenFileFormatted
        if {[catch {exec gzip $ClinGenFileFormatted} Message]} {
            puts "-- checkClinGenFile --"
            puts "gzip $ClinGenFileFormatted"
            puts "$Message\n"
        }
        
        file delete -force $ClinGenFileDownloaded
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-closestgenes.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################



proc closestGenesAnnotation {BreakpointChrom BreakpointPos Side} {
    
    global g_AnnotSV
    global g_closestGenesLeft
    global g_closestGenesRight
    
    
    
    if {![info exists g_closestGenesLeft(DONE)]} {
        
        # Creation of "$tmpCLosestLeftFile" with:
        #   SV Left coordinates: "start-5000000bp" "start"
        #   => To find the closest left gene
        #
        # Creation of "$tmpCLosestRightFile" with:
        #   SV Right coordinates: "end" "end+5000000bp"
        #   => To find the closest right gene
        
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".closestLeft.bed" tmpCLosestLeftFile
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".closestRight.bed" tmpCLosestRightFile
        
        set tmpCLosestLeftFile  "$g_AnnotSV(outputDir)/[file tail $tmpCLosestLeftFile]"
        set tmpCLosestRightFile "$g_AnnotSV(outputDir)/[file tail $tmpCLosestRightFile]"
        
        file delete -force $tmpCLosestLeftFile.tmp
        file delete -force $tmpCLosestRightFile.tmp
        
        set i 0
        set L_LinesToWriteLeft {}
        set L_LinesToWriteRight {}
        set f [open $g_AnnotSV(bedFile)]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            set chrom [lindex $Ls 0]
            set start [lindex $Ls 1]
            set end [lindex $Ls 2]
            set start_left [expr $start-5000000]; if {$start_left < 0} {set start_left 0}
            set end_right [expr $end+5000000]
            lappend L_LinesToWriteLeft "$chrom\t$start_left\t$start"
            lappend L_LinesToWriteRight "$chrom\t$end\t$end_right"
            incr i
            if {$i>100000} {
                WriteTextInFile [join [lsort -unique $L_LinesToWriteLeft] "\n"] $tmpCLosestLeftFile.tmp
                WriteTextInFile [join [lsort -unique $L_LinesToWriteRight] "\n"] $tmpCLosestRightFile.tmp
                set L_LinesToWriteLeft {}
                set L_LinesToWriteRight {}
                set i 0
            }
        }
        close $f
        WriteTextInFile [join [lsort -unique $L_LinesToWriteLeft] "\n"] $tmpCLosestLeftFile.tmp
        WriteTextInFile [join [lsort -unique $L_LinesToWriteRight] "\n"] $tmpCLosestRightFile.tmp
        
        unset L_LinesToWriteLeft
        unset L_LinesToWriteRight
        
        # Right sorting: $tmpCLosestLeftFile.tmp => ($bashTmpFileLeft) => $tmpCLosestLeftFile
        #
        # Intersection with very large files can cause trouble with excessive memory usage.
        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        set bashTmpFileLeft "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.left.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $bashTmpFileLeft
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $bashTmpFileLeft
        WriteTextInFile "export LC_ALL=C" $bashTmpFileLeft
        WriteTextInFile "sort -k1,1 -k2,2n $tmpCLosestLeftFile.tmp > $tmpCLosestLeftFile" $bashTmpFileLeft
        file attributes $bashTmpFileLeft -permissions 0755
        if {[catch {eval exec bash $bashTmpFileLeft} Message]} {
            puts "-- closestGenesAnnotation, left sort --"
            puts "sort -k1,1 -k2,2n $tmpCLosestLeftFile.tmp > $tmpCLosestLeftFile"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $bashTmpFileLeft
        file delete -force $tmpCLosestLeftFile.tmp
        
        # Right sorting: $tmpCLosestRightFile.tmp => ($bashTmpFileRight) => $tmpCLosestRightFile
        set bashTmpFileRight "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.left.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $bashTmpFileRight
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $bashTmpFileRight
        WriteTextInFile "export LC_ALL=C" $bashTmpFileRight
        WriteTextInFile "sort -k1,1 -k2,2n $tmpCLosestRightFile.tmp > $tmpCLosestRightFile" $bashTmpFileRight
        file attributes $bashTmpFileRight -permissions 0755
        if {[catch {eval exec bash $bashTmpFileRight} Message]} {
            puts "-- closestGenesAnnotation, right sort --"
            puts "sort -k1,1 -k2,2n $tmpCLosestRightFile.tmp > $tmpCLosestRightFile"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $bashTmpFileRight
        file delete -force $tmpCLosestRightFile.tmp
        
        
        # RefSeq or ENSEMBL gene file
        set genesDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)"
        set GenesFileFormatted $genesDir/genes.$g_AnnotSV(tx).sorted.bed
        
        # Intersect Left
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.closestGenesLeft.bed" tmpIntersectGeneFileLeft
        set tmpIntersectGeneFileLeft "$g_AnnotSV(outputDir)/[file tail $tmpIntersectGeneFileLeft]"
        file delete -force $tmpIntersectGeneFileLeft
        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpCLosestLeftFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileLeft} Message]} {
            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpCLosestLeftFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileLeft} Message]} {
                puts "-- closestGenesAnnotation, left intersect --"
                puts "$g_AnnotSV(bedtools) intersect -sorted -a $tmpCLosestLeftFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileLeft"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
        }
        # Intersect Right
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.closestGenesRight.bed" tmpIntersectGeneFileRight
        set tmpIntersectGeneFileRight "$g_AnnotSV(outputDir)/[file tail $tmpIntersectGeneFileRight]"
        file delete -force $tmpIntersectGeneFileRight
        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpCLosestRightFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileRight} Message]} {
            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpCLosestRightFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileRight} Message]} {
                puts "-- closestGenesAnnotation, right intersect --"
                puts "$g_AnnotSV(bedtools) intersect -sorted -a $tmpCLosestRightFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileRight"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
        }
        
        # Loading g_closestGenesLeft($chrom,$pos)
        set f [open $tmpIntersectGeneFileLeft]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            
            # SV Left coordinates: "chrom" "start-5000000bp" "start"
            set chrom [lindex $Ls 0]
            set pos [lindex $Ls 2]
            
            if {![info exists g_closestGenesLeft($chrom,$pos)]} {
                lappend g_closestGenesLeft($chrom,$pos) [lindex $Ls 7]
            } else {
                if {[lsearch -exact $g_closestGenesLeft($chrom,$pos) [lindex $Ls 7]] eq -1} {
                    lappend g_closestGenesLeft($chrom,$pos) [lindex $Ls 7]
                }
            }
        }
        file delete -force $tmpIntersectGeneFileLeft
        
        # Loading g_closestGenesRight($chrom,$pos)
        set f [open $tmpIntersectGeneFileRight]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            
            # SV Right coordinates: "chrom" "end" "end+5000000bp"
            set chrom [lindex $Ls 0]
            set pos [lindex $Ls 1]
            
            if {![info exists g_closestGenesRight($chrom,$pos)]} {
                lappend g_closestGenesRight($chrom,$pos) [lindex $Ls 7]
            } else {
                if {[lsearch -exact $g_closestGenesRight($chrom,$pos) [lindex $Ls 7]] eq -1} {
                    lappend g_closestGenesRight($chrom,$pos) [lindex $Ls 7]
                }
            }
        }
        file delete -force $tmpIntersectGeneFileRight
        
        
        # Memorisation done
        set g_closestGenesLeft(DONE) 1
        
        # Clean
        file delete -force $tmpCLosestLeftFile
        file delete -force $tmpCLosestRightFile
        
    }
    
    if {$Side eq "left"} {
        if {[info exist g_closestGenesLeft($BreakpointChrom,$BreakpointPos)]} {
            return "$g_closestGenesLeft($BreakpointChrom,$BreakpointPos)"
        } else {
            return ""
        }
    } elseif {$Side eq "right"} {
        if {[info exist g_closestGenesRight($BreakpointChrom,$BreakpointPos)]} {
            return "$g_closestGenesRight($BreakpointChrom,$BreakpointPos)"
        } else {
            return ""
        }
    } else {
        return ""
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-config.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


## Loading the different options in the following order:
## - Default options
## - Config file options (if file exists)
## - Options given in arguments
#
## Please note: the case in the name of options is not important. Ex: "snvIndelFiles" = "snvindelfiles"
##
proc configureAnnotSV {argv} {
    
    global g_AnnotSV
    global g_rankingCriteria
    
    puts "...downloading the configuration data ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    
    #######################
    ## Load default options
    #######################
    puts "\t...configuration data by default"
    set g_AnnotSV(annotationsDir)           ""
    set g_AnnotSV(annotationMode)           "both"
    set g_AnnotSV(bcftools)                 "bcftools"
    set g_AnnotSV(bedtools)                 "bedtools"
    set g_AnnotSV(benignAF)                 "0.01"
    set g_AnnotSV(bracketedAltMaxSize)      "10"
    set g_AnnotSV(bracketedAltMode)         "ALL"
    set g_AnnotSV(breakpointProximity)      "100"
    set g_AnnotSV(candidateGenesFile)       ""
    set g_AnnotSV(candidateGenesFiltering)  "0"
    set g_AnnotSV(candidateSnvIndelFiles)   ""
    set g_AnnotSV(candidateSnvIndelSamples) ""
    set g_AnnotSV(extann)                   ""    ;# list of the “.../Annotations_$g_AnnotSV(organism)/*/*.tsv(.gz) files” <=> External gene annotation files
    set g_AnnotSV(externalGeneFiles)        ""
    set g_AnnotSV(genomeBuild)              "GRCh38"
    set g_AnnotSV(hpo)                      ""    ;# "HP:0030684,HP:0085622"
    set g_AnnotSV(includeCI)                "1"
    set g_AnnotSV(metrics)                  "us"
    set g_AnnotSV(minTotalNumber)           "500"
    set g_AnnotSV(missingGTinSamplesid)     "1"
    set g_AnnotSV(outputColHeader)          ""    ;# not given in parameter
    set g_AnnotSV(outputDir)                ""
    set g_AnnotSV(outputFile)               ""
    set g_AnnotSV(overlap)                  "100"
    set g_AnnotSV(overwrite)                "1"
    set g_AnnotSV(promoterSize)             "500"
    set g_AnnotSV(rankFiltering)            "1-5,NA"
    set g_AnnotSV(ranking)                  "1"   ;# not given in parameter
    set g_AnnotSV(reciprocal)               "0"
    set g_AnnotSV(REreport)                 "0"
    set g_AnnotSV(REselect1)                "1"
    set g_AnnotSV(REselect2)                "1"
    set g_AnnotSV(samplesidBEDcol)          "-1"
    set g_AnnotSV(samplesidTSVcol)          "-1"  ;# not given in parameter
    set g_AnnotSV(snvIndelFiles)            ""
    set g_AnnotSV(snvIndelPASS)             "0"
    set g_AnnotSV(snvIndelSamples)          ""
    set g_AnnotSV(SVinputFile)              ""
    set g_AnnotSV(SVinputInfo)              "1"
    set g_AnnotSV(SVminSize)                "50"
    set g_AnnotSV(svtBEDcol)                "-1"
    set g_AnnotSV(svtTSVcol)                "-1"  ;# not given in parameter
    set g_AnnotSV(tx)                       "RefSeq"
    set g_AnnotSV(txFile)                   ""
    set g_AnnotSV(variantconvertDir)        ""
    set g_AnnotSV(variantconvertMode)       "combined"
    set g_AnnotSV(vcf)                      "0"
    
    set g_rankingCriteria(1A_Loss)         0.00
    set g_rankingCriteria(1B_Loss)        -0.60
    set g_rankingCriteria(2A_Loss)         1.00
    set g_rankingCriteria(2B_Loss)         0.00
    set g_rankingCriteria(2C-1_Loss)       0.90
    set g_rankingCriteria(2C-2_Loss)       0.00
    set g_rankingCriteria(2D-1_Loss)       0.00
    set g_rankingCriteria(2D-2_Loss)       0.90
    set g_rankingCriteria(2D-3_Loss)       0.45
    set g_rankingCriteria(2D-4_Loss)       0.90
    set g_rankingCriteria(2E-1_Loss)       0.90
    set g_rankingCriteria(2E-2_Loss)       0.45
    set g_rankingCriteria(2E-3_Loss)       0.30
    set g_rankingCriteria(2E-4_Loss)       0.20
    set g_rankingCriteria(2F-4O_Loss)     -1.00
    set g_rankingCriteria(2G_Loss)         0.00
    set g_rankingCriteria(2H_Loss)         0.15
    set g_rankingCriteria(3A_Loss)         0.00
    set g_rankingCriteria(3B_Loss)         0.45
    set g_rankingCriteria(3C_Loss)         0.90
    set g_rankingCriteria(4O_Loss)        -1.00
    set g_rankingCriteria(5F_Loss)         0.00
    set g_rankingCriteria(5G_Loss)         0.10
    set g_rankingCriteria(5H_Loss)         0.30
    
    set g_rankingCriteria(1A_Gain)         0.00
    set g_rankingCriteria(1B_Gain)        -0.60
    set g_rankingCriteria(2A_Gain)         1.00
    set g_rankingCriteria(2B_Gain)         0.00
    set g_rankingCriteria(2C_Gain)        -1.00
    set g_rankingCriteria(2D_Gain)        -1.00
    set g_rankingCriteria(2E_Gain)         0.00
    set g_rankingCriteria(2F_Gain)        -1.00
    set g_rankingCriteria(2G_Gain)         0.00
    set g_rankingCriteria(2H-1_Gain)       0.45
    set g_rankingCriteria(2H-2_Gain)       0.00
    set g_rankingCriteria(2I-1_Gain)       0.45
    set g_rankingCriteria(2I-2_Gain)       0.45
    set g_rankingCriteria(2I-3_Gain)       0.00
    set g_rankingCriteria(2J_Gain)         0.00
    set g_rankingCriteria(2K_Gain)         0.45
    set g_rankingCriteria(2L_Gain)         0.00
    set g_rankingCriteria(3A_Gain)         0.00
    set g_rankingCriteria(3B_Gain)         0.45
    set g_rankingCriteria(3C_Gain)         0.90
    set g_rankingCriteria(4O_Gain)         0.00
    set g_rankingCriteria(5F_Gain)         0.00
    set g_rankingCriteria(5G_Gain)         0.10
    set g_rankingCriteria(5H_Gain)         0.15
    
    ###########################
    ## Load config file options
    ###########################
    set lOptionsOk "annotationsDir annotationMode bcftools bedtools benignAF bracketedAltMaxSize bracketedAltMode breakpointProximity candidateGenesFile candidateGenesFiltering candidateSnvIndelFiles candidateSnvIndelSamples extann externalGeneFiles genomeBuild hpo includeCI metrics minTotalNumber missingGTinSamplesid outputDir outputFile overlap overwrite promoterSize rankFiltering reciprocal REreport REselect1 REselect2 samplesidBEDcol snvIndelFiles snvIndelPASS snvIndelSamples SVinputFile SVinputInfo SVminSize svtBEDcol tx txFile variantconvertDir variantconvertMode vcf"
    
    # Setting of $g_AnnotSV(SVinputFile) from the command line
    set i 0
    set j 1
    while {$j < [llength $argv]} {
        set optionName [lindex $argv $i]
        regsub "^-|:\[ \t\]" $optionName "" optionName
        if {$optionName eq "SVinputFile"} {
            set g_AnnotSV(SVinputFile) [lindex $argv $j]
        }
        incr i 2
        incr j 2
    }
    
    set configFile "$g_AnnotSV(etcDir)/configfile"
    if {[file exists "[file dirname $g_AnnotSV(SVinputFile)]/configfile"]} {
        set configFile "[file dirname $g_AnnotSV(SVinputFile)]/configfile"
    }
    puts "\t...configuration data from $configFile"
    set testColumnNames 0
    foreach L [LinesFromFile $configFile] {
        if {[regexp "^# AnnotSV Output columns:" $L]} {set testColumnNames 1}
        if {[regexp "^# AnnotSV ranking criteria:" $L]} {set testColumnNames 2}
        if {[regexp "^#" $L]} {continue}
        if {$L eq ""} {continue}
        if { ! $testColumnNames} {
            # Reading the configfile options (not the column names)
            regsub -all "^-|:\[ \t\]" $L "" L
            set optionName  [lindex $L 0]
            set optionValue [lindex $L 1]
            set k [lsearch -exact -nocase $lOptionsOk $optionName]
            if {$k != -1} {
                set optionName [lindex $lOptionsOk $k]
                set g_AnnotSV($optionName) $optionValue
            } else {
                puts "############################################################################"
                puts "\"$optionName\" option not known."
                puts "For more information on the arguments, please use the -help option"
                puts "####################################
                ########################################"
                exit 2
            }
        } elseif {$testColumnNames eq 1} {
            # Reading the configfile column names (not the options)
            # - Users can select only a subset of the annotation columns provided by AnnotSV
            # - Essential annotations are added below (at the end of the proc)
            regsub "( |\t|\\*)+$" $L "" L
            lappend g_AnnotSV(outputColHeader) $L
        } elseif {$testColumnNames eq 2} {
            # Reading the weights for the ranking criteria
            set g_rankingCriteria([lindex $L 0]) [lindex $L 1]
        }
    }
    
    ##################################
    ## Load options given in arguments
    ##################################
    puts "\t...configuration data given in arguments"
    set i 0
    set j 1
    while {$j < [llength $argv]} {
        set optionName [lindex $argv $i]
        regsub "^-|:\[ \t\]" $optionName "" optionName
        set optionValue [lindex $argv $j]
        set  k [lsearch -exact -nocase $lOptionsOk $optionName]
        if {$k != -1} {
            set optionName [lindex $lOptionsOk $k]
            set g_AnnotSV($optionName) $optionValue
        } else {
            puts "\"$optionName\" option not known."
            puts "For more information on the arguments, please use the -help option"
            exit 2
        }
        
        incr i 2
        incr j 2
    }
    
    ########################################
    ## Checking of the configuration options
    ########################################
    puts "\t...checking all these configuration data\n"
    
    ## annotationsDir, variantconvertDir: It must be existing directories (or "" for the default)
    if {$g_AnnotSV(annotationsDir) eq ""} {
        set g_AnnotSV(annotationsDir) "$g_AnnotSV(installDir)/share/AnnotSV"
    } else {
        regsub "/+$" $g_AnnotSV(annotationsDir) "" g_AnnotSV(annotationsDir)
        if {![file isdirectory $g_AnnotSV(annotationsDir)]} {
            puts "AnnotSV needs in argument an existing path of the annotations directory (-annotationsDir = \"$g_AnnotSV(annotationsDir)\") - Exit with error."
            exit 2
        }
    }
    regsub -all {/+} $g_AnnotSV(annotationsDir) {/} g_AnnotSV(annotationsDir)
    if {$g_AnnotSV(variantconvertDir) eq ""} {
        set g_AnnotSV(variantconvertDir) "$g_AnnotSV(installDir)/share/python3/variantconvert/"
    } else {
        regsub "/+$" $g_AnnotSV(variantconvertDir) "" g_AnnotSV(variantconvertDir)
        if {![file isdirectory $g_AnnotSV(variantconvertDir)]} {
            puts "AnnotSV needs in argument an existing path of the variantconvert directory (-variantconvertDir = \"$g_AnnotSV(variantconvertDir)\") - Exit with error."
            exit 2
        }
    }
    regsub -all {/+} $g_AnnotSV(variantconvertDir) {/} g_AnnotSV(variantconvertDir)
    
    ## SVinputFile: We should have a bed or VCF input file
    if {$g_AnnotSV(SVinputFile) eq ""} {
        puts "AnnotSV needs in argument the path of your bed or VCF input file (-SVinputFile ...) - Exit with error."
        exit 2
    }
    if {![regexp -nocase "\\.(bed|vcf(.gz)?)$" $g_AnnotSV(SVinputFile)]} {
        puts "############################################################################"
        puts "Bad option value: -SVinputFile = $g_AnnotSV(SVinputFile)"
        puts "Extension file should be \".bed\" or \".vcf\" - Exit with error."
        puts "############################################################################"
        exit 2
    }
    ## SVinputFile: It must be an existing file
    if {![file exists $g_AnnotSV(SVinputFile)]} {
        puts "############################################################################"
        puts "Bad value for the SVinputFile option, file does not exist ($g_AnnotSV(SVinputFile)) - Exit with error."
        puts "############################################################################"
        exit 2
    }
    ## SVinputFile: no SV to annotate if it is an empty file
    ## (could happen if AnnotSV is implemented into a pipeline)
    if {[isAnEmptyFile $g_AnnotSV(SVinputFile)]} {
        puts "############################################################################"
        puts "SVinputFile ($g_AnnotSV(SVinputFile) is empty, no SV to annotate - Exit without error."
        puts "############################################################################"
        exit 0
    }
    
    ## bracketedAltMaxSize: positive float
    if {![string is double $g_AnnotSV(bracketedAltMaxSize)] || $g_AnnotSV(bracketedAltMaxSize) < 0 } {
        puts "############################################################################"
        puts "Bad option value: -bracketedAltMaxSize = $g_AnnotSV(bracketedAltMaxSize)"
        puts "Should be a positive float, default = 10"
        puts "############################################################################"
        exit 2
    }
    
    ## benignAF: [0.001-0.1], default = 0.01
    if {![string is double $g_AnnotSV(benignAF)] || $g_AnnotSV(benignAF) < 0.001 || $g_AnnotSV(benignAF) > 0.1} {
        puts "############################################################################"
        puts "Bad option value: -benignAF = $g_AnnotSV(benignAF)"
        puts "Should be in the \[0.001-0.1\] range values, default = 0.01"
        puts "############################################################################"
        exit 2
    }
    
    ## metrics: us or fr
    if {$g_AnnotSV(metrics) ne "us" && $g_AnnotSV(metrics) ne "fr"} {
        puts "############################################################################"
        puts "Bad option value: -metrics = $g_AnnotSV(metrics)"
        puts "Should be \"us\" or \"fr\" - Continue with the \"us\" default."
        puts "############################################################################"
        set g_AnnotSV(metrics) "us"
    }
    
    ## It must be a boolean: 1 or 0
    foreach val {candidateGenesFiltering includeCI missingGTinSamplesid overwrite reciprocal REreport REselect1 REselect2 SVinputInfo snvIndelPASS vcf} {
        if {$g_AnnotSV($val) ne "1" && $g_AnnotSV($val) ne "0"} {
            puts "############################################################################"
            puts "Bad option value: -$val = $g_AnnotSV($val)"
            puts "Should be \"1\" or \"0\""
            puts "############################################################################"
            exit 2
        }
    }
    
    # g_AnnotSV(hpo)
    # It must be a comma, semicolon or space separated class values, default = ""
    # (e.g.: "HP:0001156,HP:0001363,HP:0011304")
    set g_AnnotSV(hpo) [split $g_AnnotSV(hpo) ",|;| "]
    set L_correctHPO {}
    set L_display ""
    foreach hpo $g_AnnotSV(hpo) {
        if {[regexp "^HP:\[0-9\]+$" $hpo]} {
            lappend L_correctHPO $hpo
        } else {
            lappend L_display "Bad format for the HPO term: $hpo. Not used."
        }
    }
    if {$L_display ne ""} {
        puts "############################################################################"
        puts "[join $L_display "\n"]"
        puts "############################################################################"
    }
    set g_AnnotSV(hpo) [join $L_correctHPO ","]
    
    # g_AnnotSV(rankFiltering)
    ## It must be a list between 1 and 5 and NA
    ## e.g.: "3,4,5" or "3-5"
    set liste {}
    while {[regexp "(\[1-5\])-(\[1-5\])" $g_AnnotSV(rankFiltering) match i j]} {
        while {$i <= $j} {
            lappend liste $i
            incr i
        }
        regsub "\[1-5\]-\[1-5\]" $g_AnnotSV(rankFiltering) "" g_AnnotSV(rankFiltering)
    }
    foreach i [split $g_AnnotSV(rankFiltering) ","] {
        if {[lsearch -exact {1 2 3 4 5 NA} $i] ne -1} {lappend liste $i}
    }
    set liste [lsort -unique $liste]
    set g_AnnotSV(rankFiltering) $liste
    
    ## g_AnnotSV(outputDir) must be an existing directory. Else, we create it.
    ## g_AnnotSV(outputFile) must be defined and should not already exists.
    ## g_AnnotSV(outputFile) extension must be ".tsv".
    if {$g_AnnotSV(outputDir) eq "" && [regexp "/" "$g_AnnotSV(outputFile)"]} {
        # Info: Directory and name file could be both given in the g_AnnotSV(outputFile) option
        set g_AnnotSV(outputDir) [file dirname "$g_AnnotSV(outputFile)"]
    }
    if {$g_AnnotSV(outputDir) ne ""} {
        if {![file exists $g_AnnotSV(outputDir)]} {
            file mkdir "$g_AnnotSV(outputDir)"
        }
    } else {
        set g_AnnotSV(outputDir) "[clock format [clock seconds] -format "%Y%m%d"]_AnnotSV"
        file mkdir "$g_AnnotSV(outputDir)"
    }
    regsub "/+$" $g_AnnotSV(outputDir) "" g_AnnotSV(outputDir)
    if {$g_AnnotSV(outputFile) ne ""} {
        set g_AnnotSV(outputFile) [file tail $g_AnnotSV(outputFile)]
        if {[string range $g_AnnotSV(outputFile) end-3 end] ne ".tsv"} {
            set g_AnnotSV(outputFile) "$g_AnnotSV(outputFile).tsv"
        }
    } else {
        regsub -nocase "(\\.bed|\\.vcf(\\.gz)?)$" [file tail $g_AnnotSV(SVinputFile)] ".annotated.tsv" g_AnnotSV(outputFile)
    }
    if {!$g_AnnotSV(overwrite) && [file exists $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile)]} {
        puts "############################################################################"
        puts "Bad value for the -outputFile option, file already exists ($g_AnnotSV(outputDir)/$g_AnnotSV(outputFile)) - Exit with error."
        puts "############################################################################"
        exit 2
    }
    set g_AnnotSV(outputDir) [file normalize $g_AnnotSV(outputDir)]
    
    # bedtools/bcftools: It should be a good path that we can run
    foreach tool {bedtools bcftools} {
        if {[catch {eval exec $g_AnnotSV($tool) --version} Message]} {
            puts "############################################################################"
            puts "Bad value for the $tool option ($g_AnnotSV($tool))"
            puts "$Message"
            puts "Exit with error."
            puts "############################################################################"
            exit 2
        } else {
            # Minimum bedtools version compatible with AnnotSV is version 2.25
            if {$tool eq "bedtools"} {
                if {[regexp "(\[0-9\]+\\.\[0-9\]+\\.\[0-9\]+)" $Message match bedtoolsVersion]} {
                    set L_bedtoolsVersion [split $bedtoolsVersion "."]
                    if {[lindex $L_bedtoolsVersion 0] < 2 || ([lindex $L_bedtoolsVersion 0] eq 2 && [lindex $L_bedtoolsVersion 1] < 25)} {
                        puts "############################################################################"
                        puts "The minimum bedtools version compatible with AnnotSV is version 2.25."
                        puts "You are using bedtools version $bedtoolsVersion"
                        puts "Exit with error."
                        puts "############################################################################"
                        exit 2
                    }
                }
            }
        }
    }
    
    # tx: It must be "RefSeq" or "ENSEMBL"
    if {$g_AnnotSV(tx) ne "RefSeq" && $g_AnnotSV(tx) ne "ENSEMBL"} {
        puts "############################################################################"
        puts "Bad option value: -tx = $g_AnnotSV(tx)"
        puts "Should be \"RefSeq\" or \"ENSEMBL\""
        puts "############################################################################"
        exit 2
    }
    
    ## txFile: It must be an existing file
    if {$g_AnnotSV(txFile) ne "" && ![file exists $g_AnnotSV(txFile)]} {
        puts "############################################################################"
        puts "Bad value for the txFile option, file does not exist ($g_AnnotSV(txFile)) - Exit with error."
        puts "############################################################################"
        exit 2
    }
    
    ## candidateGenesFile, externalGeneFiles: It must be an existing file
    foreach annfile {candidateGenesFile externalGeneFiles} {
        if {$g_AnnotSV($annfile) ne "" && ![file exists $g_AnnotSV($annfile)]} {
            puts "############################################################################"
            puts "Bad value for the $annfile option, file does not exist ([set g_AnnotSV($annfile)]) - Exit with error."
            puts "############################################################################"
            exit 2
        }
    }
    
    ## It must be an integer comprised between 0 and 100
    if {[regexp "\[^0-9\]" $g_AnnotSV(overlap)] || $g_AnnotSV(overlap)<=0 || $g_AnnotSV(overlap)>100} {
        puts "############################################################################"
        puts "Bad value for the overlap option ($g_AnnotSV(overlap)), should be an integer ]0,100] - Exit with error."
        puts "############################################################################"
        exit 2
    }
    
    ## It must be an integer comprised between 100 and 1000
    if {[regexp "\[^0-9\]" $g_AnnotSV(minTotalNumber)] || $g_AnnotSV(minTotalNumber)<100 || $g_AnnotSV(minTotalNumber)>1000} {
        puts "############################################################################"
        puts "Bad value for the $val option ($g_AnnotSV($val)), should be an integer comprised between 100 and 1000 - Exit with error."
        puts "############################################################################"
        exit 2
    }
    
    ## It must be an integer > 0
    foreach val {breakpointProximity promoterSize SVminSize} {
        if {[regexp "\[^0-9\]" $g_AnnotSV($val)]} {
            puts "############################################################################"
            puts "Bad value for the $val option ($g_AnnotSV($val)), should be a positive integer - Exit with error."
            puts "############################################################################"
            exit 2
        }
    }
    
    ## It must be "both", "full" or "split"
    set L_annotationMode {both full split}
    if {[lsearch -exact $L_annotationMode "$g_AnnotSV(annotationMode)"] eq -1} {
        puts "############################################################################"
        puts "Bad option value: -annotationMode = $g_AnnotSV(annotationMode)"
        puts "Should be \"both\", \"full\" or \"split\""
        puts "############################################################################"
        exit 2
    }
    
    ## It must be "combined", "full" or "fullsplit"
    set L_variantconvertMode {combined full fullsplit}
    if {[lsearch -exact $L_variantconvertMode "$g_AnnotSV(variantconvertMode)"] eq -1} {
        puts "############################################################################"
        puts "Bad option value: -variantconvertMode = $g_AnnotSV(variantconvertMode)"
        puts "Should be \"combined\", \"full\" or \"fullsplit\""
        puts "############################################################################"
        exit 2
    }
    
    ## The following step could be improved: too long
    #################################################
    set g_AnnotSV(snvIndelSamples) [split $g_AnnotSV(snvIndelSamples)  ";|,"]
    ## If "snvIndelFiles" option is defined:
    ## It must be existing files
    if {$g_AnnotSV(snvIndelFiles) ne ""} {
        # Warning: A file that doesn't exists (or badly defined with a regexp) will not return an error message but will return an empty list:
        set g_AnnotSV(snvIndelFiles) [eval glob -nocomplain $g_AnnotSV(snvIndelFiles)]
    }
    ## After that, if "snvIndelFiles" contains at least 1 existing file:
    if {$g_AnnotSV(snvIndelFiles) ne ""} {
        ## All "$snvIndelSamples" should be presents in one of the VCF files
        ## If the "-snvIndelSamples" option is not defined, we defined it with all samples from the "snvIndelFiles".
        set L_correctSamples {}
        set L_allSamplesFromVCF {}
        foreach vcfF $g_AnnotSV(snvIndelFiles) {
            if {[regexp -nocase ".gz$" $vcfF]} {
                set f [open "|gzip -cd $vcfF"]
            } else {
                set f [open "$vcfF"]
            }
            while {![eof $f]} {
                set L [gets $f]
                if {[string range $L 0 5] ne "#CHROM"} {continue}
                set Ls [split $L "\t"]
                lappend L_allSamplesFromVCF {*}[lrange $Ls 9 end]
                foreach sample $g_AnnotSV(snvIndelSamples) {
                    if {[lsearch -exact $Ls $sample] ne -1} {lappend L_correctSamples $sample}
                }
                # We can't put a break here, because the pipe command: "|gzip ..." still produces data.
                # break will creates a broken pipe signal:
                #   child killed: write on pipe with no readers
                #   while executing "close $f"
            }
            close $f
        }
        if {$g_AnnotSV(snvIndelSamples) eq ""} {
            set L_allSamplesFromVCF [lsort -unique $L_allSamplesFromVCF]
            set g_AnnotSV(snvIndelSamples) $L_allSamplesFromVCF
        } else {
            if {$L_correctSamples ne ""} {
                set L_correctSamples [lsort -unique $L_correctSamples]
                set g_AnnotSV(snvIndelSamples) $L_correctSamples; # Remove samples from g_AnnotSV(snvIndelSamples) that are not in a VCF file
            } else {
                set L_allSamplesFromVCF [lsort -unique $L_allSamplesFromVCF]
                set g_AnnotSV(snvIndelSamples) $L_allSamplesFromVCF
            }
        }
    } else {
        set g_AnnotSV(snvIndelSamples) ""
    }
    
    
    set g_AnnotSV(candidateSnvIndelSamples) [split $g_AnnotSV(candidateSnvIndelSamples)  ";|,"]
    ## If "candidateSnvIndelFiles" option is defined:
    ## It must be existing files
    if {$g_AnnotSV(candidateSnvIndelFiles) ne ""} {
        # Warning: A file that doesn't exist (or badly defined with a regexp) will not return an error message but will return an empty list:
        set g_AnnotSV(candidateSnvIndelFiles) [eval glob -nocomplain $g_AnnotSV(candidateSnvIndelFiles)]
    }
    ## After that, if "candidateSnvIndelFiles" contains at least 1 existing file:
    if {$g_AnnotSV(candidateSnvIndelFiles) ne ""} {
        ## All "$candidateSnvIndelSamples" should be presents in one of the VCF files
        ## If the "-candidateSnvIndelSamples" option is not defined, we defined it with all samples from the "candidateSnvIndelFiles".
        set L_correctCandidateSamples ""
        set L_allSamplesFromVCF {}
        foreach vcfF $g_AnnotSV(candidateSnvIndelFiles) {
            if {[regexp -nocase ".gz$" $vcfF]} {
                set f [open "|gzip -cd $vcfF"]
            } else {
                set f [open "$vcfF"]
            }
            while {![eof $f]} {
                set L [gets $f]
                if {[string range $L 0 5] eq "#CHROM"} {
                    set Ls [split $L "\t"]
                    lappend L_allSamplesFromVCF {*}[lrange $Ls 9 end]
                    foreach sample $g_AnnotSV(candidateSnvIndelSamples) {
                        if {[lsearch -exact $Ls $sample] ne -1} {lappend L_correctCandidateSamples $sample}
                    }
                    # We can't put a break here, because the pipe command: "|gzip ..." still produces data.
                    # break will creates a broken pipe signal:
                    #   child killed: write on pipe with no readers
                    #   while executing "close $f"
                }
            }
            close $f
        }
        
        if {$g_AnnotSV(candidateSnvIndelSamples) eq ""} {
            set L_allSamplesFromVCF [lsort -unique $L_allSamplesFromVCF]
            set g_AnnotSV(candidateSnvIndelSamples) $L_allSamplesFromVCF
        } else {
            if {$L_correctCandidateSamples ne ""} {
                set L_correctCandidateSamples [lsort -unique $L_correctCandidateSamples]
                set g_AnnotSV(candidateSnvIndelSamples) $L_correctCandidateSamples; # Remove samples from g_AnnotSV(candidateSnvIndelSamples) that are not in a VCF file
            } else {
                set L_allSamplesFromVCF [lsort -unique $L_allSamplesFromVCF]
                set g_AnnotSV(candidateSnvIndelSamples) $L_allSamplesFromVCF
            }
        }
        
        # Check if the "candidateSnvIndelFiles" contains the GT field
        # (else the g_AnnotSV(candidateSnvIndelSamples) is set to "")
        filteredVCFannotation "FULL" "" "" "" ""
        
    } else {
        set g_AnnotSV(candidateSnvIndelSamples) ""
    }
    
    ## It must be "ALL, BND, DEL, DUP, INS or INV, "
    set L_authorized_values {ALL BND DEL DUP INS INV}
    regsub -all " " $g_AnnotSV(bracketedAltMode) "" brackMode
    set L_bracketedAltMode [split $brackMode ","]
    foreach mode $L_bracketedAltMode {
        if {![regexp -nocase "$mode" $L_authorized_values]} {
            puts "############################################################################"
            puts "Bad option value: -bracketedAltMode = $g_AnnotSV(bracketedAltMode)"
            puts "Should be \"ALL\", \"BND\", \"DEL\", \"DUP\", \"INS\" or \"INV\""
            puts "############################################################################"
            exit 2
        }
    }
    
    ## It must be "GRCh37" or "GRCh38" or "CHM13" or "mm39" or "mm9" or "mm10" for the genomeBuild option.
    if {![regexp -nocase "^(GRCh37)|(GRCh38)|(CHM13)|(mm39)|(mm9)|(mm10)$" $g_AnnotSV(genomeBuild)]} {
        puts "############################################################################"
        puts "Bad option value: -genomeBuild = $g_AnnotSV(genomeBuild)"
        puts "Should be \"GRCh37\", \"GRCh38\", \"CHM13\", \"mm39\", \"mm9\" or \"mm10\""
        puts "############################################################################"
        exit 2
    }
    # Definition of the $g_AnnotSV(organism) variable
    if {[regexp -nocase "^(GRCh37)|(GRCh38)|(CHM13)$" $g_AnnotSV(genomeBuild)]} {
        set g_AnnotSV(organism) "Human"
    } elseif {[regexp -nocase "^(mm39)|(mm9)|(mm10)$" $g_AnnotSV(genomeBuild)]} {
        set g_AnnotSV(organism) "Mouse"
    }
    
    
    # Some annotation columns can not be removed by the user:
    # - Annotations which identify the SV:                     AnnotSV_ID SV_chrom SV_start SV_end SV_length SV_type
    # - Annotations essential for the ranking:                 Annotation_mode Gene_name Gene_Count Overlapped_CDS_percent Frameshift Location Location2 RE_gene Overlapped_CDS_length Exon_count
    #                                                          P_gain_coord P_loss_coord P_snvindel_nb B_gain_coord B_loss_coord
    #                                                          po_P_gain_coord po_P_loss_coord po_B_gain_allG_coord po_B_gain_someG_coord po_B_loss_allG_coord po_B_loss_someG_coord
    #                                                          HI TS GnomAD_pLI LOEUF_bin DDD_HI_percent PhenoGenius_specificity Exomiser_gene_pheno_score OMIM_morbid
    # - Annotations essential for variantconvert (VCF output): Samples_ID
    # - Ranking annotations:                                   AnnotSV_ranking_score AnnotSV_ranking_criteria ACMG_class
    # - Annotations linked to the previous essential annotations: Tx Tx_start Tx_end Overlapped_tx_length Dist_nearest_SS Nearest_SS_type Intersect_start Intersect_end
    #   (to be improved with the python reimplementation)         P_gain_phen P_gain_hpo P_gain_source P_loss_phen P_loss_hpo P_loss_source
    #                                                             po_P_gain_phen po_P_gain_hpo po_P_gain_source po_P_gain_percent po_P_loss_phen po_P_loss_hpo po_P_loss_source po_P_loss_percent
    #                                                             P_snvindel_phen B_gain_source B_gain_AFmax B_loss_source B_loss_AFmax
    #                                                             po_B_gain_allG_source po_B_gain_someG_source po_B_gain_someG_coord po_B_loss_allG_source po_B_loss_someG_source
    set g_AnnotSV(genesBasedAnn) 1
    foreach col "SV_chrom SV_start SV_end SV_length SV_type Annotation_mode Gene_name Gene_Count RE_gene P_gain_coord P_loss_coord P_snvindel_nb B_gain_coord B_loss_coord po_P_gain_coord po_P_loss_coord po_B_gain_allG_coord po_B_loss_allG_coord po_B_loss_someG_coord HI TS GnomAD_pLI LOEUF_bin DDD_HI_percent PhenoGenius_specificity Exomiser_gene_pheno_score OMIM_morbid Location Location2 Overlapped_CDS_percent Frameshift Exon_count Samples_ID" {
        if {[lsearch -exact "$g_AnnotSV(outputColHeader)" $col] eq -1} {
            lappend g_AnnotSV(outputColHeader) $col
        }
    }
    
    return
}

proc createBEDinputHeaderFile {} {
    
    global g_AnnotSV
    global headerFileToRemove
    global addNAinBED
    
    set addNAinBED 0
    
    ## SVinputfile is a BED
    regsub -nocase ".bed$" $g_AnnotSV(bedFile) ".header.tsv" BEDinputHeaderFile
    set BEDinputHeaderFile "$g_AnnotSV(outputDir)/[file tail $BEDinputHeaderFile]"
    
    ## Creation of the header file
    set f [open $g_AnnotSV(bedFile)]
    while {![eof $f]} {
        set L [gets $f]
        if {$L eq ""} {continue}
        if {[regexp "^#" $L]} {
            set header $L
            continue
        }
        break
    }
    close $f
    if {[info exists header]} {
        if {$g_AnnotSV(samplesidBEDcol) == -1} {
            set i_samplesid [lsearch -exact "Samples_ID" [split $header "\t"]]
            if {$i_samplesid ne -1} {
                set g_AnnotSV(samplesidBEDcol) [expr {$i_samplesid+1}]
            } else {
                append header "\tSamples_ID"
                set addNAinBED 1
                set g_AnnotSV(samplesidBEDcol) [llength [split $header "\t"]]
            }
        }
        WriteTextInFile "$header" $BEDinputHeaderFile
        set headerFileToRemove 1
    } else {
        set header "SV_chrom\tSV_start\tSV_end"
        set theBEDlength [llength [split [FirstLineFromFile $g_AnnotSV(bedFile)] "\t"]]
        set i 4
        set k 1
        while {$i <= $theBEDlength} {
            if {$i eq $g_AnnotSV(svtBEDcol)} {
                append header "\tSV_type"
            } elseif {$i eq $g_AnnotSV(samplesidBEDcol)} {
                append header "\tSamples_ID"
            } else {
                append header "\tuser#$k"; incr k
            }
            incr i
        }
        
        if {$g_AnnotSV(samplesidBEDcol) == -1} {
            append header "\tSamples_ID"
            set addNAinBED 1
            set g_AnnotSV(samplesidBEDcol) [expr {$theBEDlength+1}]
        }
        WriteTextInFile "$header" $BEDinputHeaderFile
        set headerFileToRemove 1
    }
    return
}

proc addNAinSamplesIDbedCol {} {
    
    global g_AnnotSV
    global addNAinBED
    
    ## SVinputfile is a BED, with no samplesid column
    if {$addNAinBED} {
        # Add a supplementary column in the BED input file with "NA" (corresponding to the sample name)
        # => needed for variantconvert + to create the SV database (in the future)
        set L_toWrite {}
        set i 0
        set f [open $g_AnnotSV(bedFile)]
        regsub -nocase ".bed$" $g_AnnotSV(bedFile) ".NA.bed" g_AnnotSV(NAbedFile)
        file delete -force "$g_AnnotSV(NAbedFile)"
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            if {[regexp "^#" $L]} {continue}
            set L "$L\tNA"
            #if {![info exists theNAbedLength]} {set theNAbedLength [llength [split $L "\t"]]}
            lappend L_toWrite $L
            incr i
            if {$i > 100000} {
                WriteTextInFile [join "$L_toWrite" "\n"] $g_AnnotSV(NAbedFile)
                set L_toWrite {}
                set i 0
            }
        }
        close $f
        WriteTextInFile [join "$L_toWrite" "\n"] $g_AnnotSV(NAbedFile)
        
        regsub -nocase ".bed$" $g_AnnotSV(bedFile) ".header.tsv" BEDinputHeaderFile
        set BEDinputHeaderFile "$g_AnnotSV(outputDir)/[file tail $BEDinputHeaderFile]"
        regsub -nocase ".bed$" $g_AnnotSV(bedFile) ".NA.header.tsv" NAbedinputHeaderFile
        set NAbedinputHeaderFile "$g_AnnotSV(outputDir)/[file tail $NAbedinputHeaderFile]"
        file rename -force $BEDinputHeaderFile $NAbedinputHeaderFile
        
        set g_AnnotSV(bedFile) $g_AnnotSV(NAbedFile)
        
        # Number of the "Samples_ID" column in the new "NA" BED file (not the informatic count in a list!)
        # set g_AnnotSV(samplesidBEDcol) "$theNAbedLength"
        
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-cosmic.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


## - Check if the "CosmicCompleteCNA.tsv.gz" file has been downloaded:
##   If yes, create the "CosmicCompleteCNA_$g_AnnotSV(genomeBuild).sorted.bed" file (in the "Users" directory) and delete the previous one.
proc checkCOSMICfile {} {
    
    global g_AnnotSV
    
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)"
    set COSMICdir "$extannDir/FtIncludedInSV/COSMIC"
    set COSMICfileDownloaded "$COSMICdir/$g_AnnotSV(genomeBuild)/CosmicCompleteCNA.tsv.gz"
    set COSMICfileFormatted "$extannDir/Users/$g_AnnotSV(genomeBuild)/FtIncludedInSV/CosmicCompleteCNA_$g_AnnotSV(genomeBuild).bed"
    
    if {[file exists $COSMICfileFormatted]} {
        set g_AnnotSV(COSMICann) 1
    } elseif {[file exists $COSMICfileDownloaded]} {
        # Creation of "CosmicCompleteCNA_$g_AnnotSV(genomeBuild).sorted.bed"
        puts "\t...COSMIC configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        set i 0
        set f [open "| gzip -cd $COSMICfileDownloaded"]
        puts "\t\t...reading $COSMICfileDownloaded"
        while {![eof $f]} {
            set L [gets $f]
            set Ls [split $L "\t"]
            incr i
            if {[expr {$i%10000000}] eq 0} {puts "\t$i lines read"}
            if {[regexp "^COSMIC_CNV_ID|CNV_ID" $L]} {
                set i_id [lsearch -regexp $Ls "^COSMIC_CNV_ID|CNV_ID"]
                set i_type [lsearch -exact $Ls "MUT_TYPE"]
                set i_coord [lsearch -regexp $Ls "Chromosome:G_Start"] ;# Old raw data version (before 2023)
                set i_chrom [lsearch -regexp $Ls "CHROMOSOME"]    ;# New raw data version
                set i_start [lsearch -regexp $Ls "GENOME_START"]  ;# New raw data version
                set i_end [lsearch -regexp $Ls "GENOME_STOP"]     ;# New raw data version
                set L_texteToWrite(Header) "#Chrom\tstart\tend\tCOSMIC_ID\tCOSMIC_MUT_TYP"
                continue
            }
            if {$L eq ""} {continue}
            
            set id [lindex $Ls $i_id]
            set cnvtype [lindex $Ls $i_type]
            
            if {$i_coord ne -1} {
                set coord [lindex $Ls $i_coord]
                regexp "^(\[0-9\]+):(\[0-9\]+)\\.\\.(\[0-9\]+)$" $coord match chrom start end
            } else {
                set chrom [lindex $Ls $i_chrom]
                set start [lindex $Ls $i_start]
                set end   [lindex $Ls $i_end]
            }
            
            lappend L_texteToWrite($chrom) "$chrom\t$start\t$end\t$id\t$cnvtype"
        }
        
        puts "\t\t...creation of the COSMIC bed file in $extannDir/Users/$g_AnnotSV(genomeBuild)/FtIncludedInSV/"
        WriteTextInFile $L_texteToWrite(Header) $COSMICfileFormatted
        foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
            if {![info exists L_texteToWrite($chrom)]} {continue}
            
            ## Remove identical lines (due to liftover_to_hg19 for example)
            set L_texteToWrite($chrom) [lsort -unique $L_texteToWrite($chrom)]
            
            ## Put in karyotypic order
            set L_texteToWrite($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_texteToWrite($chrom)]]
            
            ## Write the BED file
            WriteTextInFile [join $L_texteToWrite($chrom) "\n"] $COSMICfileFormatted
            unset L_texteToWrite($chrom)
        }
        
        file delete -force $COSMICfileDownloaded
        
        puts "\t\t   done ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        set g_AnnotSV(COSMICann) 1
    }
    
    return
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-cytoband.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################



# Check the cytoband annotations files
# Create : .../Annotations_$g_AnnotSV(organism)/AnyOverlap/CytoBand/$g_AnnotSV(genomeBuild)/cytoBand_$g_AnnotSV(genomeBuild).formatted.sorted.bed
# (After the formatting step, the "cytoBand_$g_AnnotSV(genomeBuild).bed" is deleted)
proc checkCytoband {} {
    
    global g_AnnotSV
    global g_numberOfAnnotationCol
    
    set cytobandDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/AnyOverlap/CytoBand/$g_AnnotSV(genomeBuild)"
    set cytobandBEDfile     "$cytobandDir/cytoBand_$g_AnnotSV(genomeBuild).bed"
    set formattedFile       "$cytobandDir/cytoBand_$g_AnnotSV(genomeBuild).formatted.bed"
    set formattedSortedFile "$cytobandDir/cytoBand_$g_AnnotSV(genomeBuild).formatted.sorted.bed"
    set cytobandHeaderFile  "$cytobandDir/cytoBand_$g_AnnotSV(genomeBuild).header.tsv"
    
    if {[file exists $cytobandBEDfile]} {
        
        # Create the formatted bedfile and check the header existence
        checkBed $cytobandBEDfile $cytobandDir
        
        # Create the cytoband header file
        WriteTextInFile "#chrom\tstart\tend\tCytoBand" $cytobandHeaderFile
        
        # Create the formatted and sorted bedfile
        #   Sorting of the bedfile:
        #   Intersection with very large files can cause trouble with excessive memory usage.
        #   A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n $formattedFile > $formattedSortedFile" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkCytoband --"
            puts "sort -k1,1 -k2,2n $formattedFile > $formattedSortedFile"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $sortTmpFile
        file delete -force $formattedFile
        file delete -force $cytobandBEDfile
    }
    
    # Number of annotation columns (without the 3 columns "chrom start end")
    set g_numberOfAnnotationCol($formattedSortedFile) 1
    
    # Cytoband annotation?
    if {[file exists $formattedSortedFile] && [file exists $cytobandHeaderFile]} {
        set g_AnnotSV(cytoband) 1
    } else {
        set g_AnnotSV(cytoband) 0
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-encodeblacklist.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


## - Check if the downloaded "ENCODEblacklist.bed" file or the formatted "*_ENCODEblacklist.sorted.bed" file exist
proc checkENCODEblacklistFile {} {
    
    global g_AnnotSV
    
    ## Check if the encodeblacklist file has been downloaded then formatted
    #############################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations"
    set encodeblacklistFileDownloaded [glob -nocomplain "$extannDir/ENCODEblacklist/$g_AnnotSV(genomeBuild)/ENCODEblacklist.bed"]
    set encodeblacklistFileFormatted [glob -nocomplain "$extannDir/ENCODEblacklist/$g_AnnotSV(genomeBuild)/*_ENCODEblacklist.sorted.bed"]
    
    if {$encodeblacklistFileDownloaded eq "" && $encodeblacklistFileFormatted eq ""} {
        # No ENCODEblacklist annotation
        set g_AnnotSV(ENCODEblacklistAnn) 0
        return
    } else {
        # ENCODEblacklist annotation
        set g_AnnotSV(ENCODEblacklistAnn) 1
        # Check if the user asked for these annotations in the configfile
        set test 0
        foreach col "ENCODE_blacklist_left ENCODE_blacklist_characteristics_left ENCODE_blacklist_right ENCODE_blacklist_characteristics_right" {
            if {[lsearch -exact "$g_AnnotSV(outputColHeader)" $col] ne -1} {set test 1;break}
        }
        if {$test eq 0} {set g_AnnotSV(ENCODEblacklistAnn) 0; return}
    }
    
    if {[llength $encodeblacklistFileFormatted]>1} {
        puts "Several ENCODE blacklist files exist:"
        puts "$encodeblacklistFileFormatted"
        puts "Keep only one: [lindex $encodeblacklistFileFormatted end]\n"
        foreach encodeblacklist [lrange $encodeblacklistFileFormatted 0 end-1] {
            file rename -force $encodeblacklist $encodeblacklist.notused
        }
        return
    }
    
    if {$encodeblacklistFileFormatted eq ""} {
        # The downloaded file exist but not the formatted.
        set encodeblacklistFileFormatted "$extannDir/ENCODEblacklist/$g_AnnotSV(genomeBuild)/[clock format [clock seconds] -format "%Y%m%d"]_ENCODEblacklist.sorted.bed"
        ReplaceTextInFile "#Chrom\tStart\tEnd\tENCODE_blacklist\tENCODE_blacklist_characteristics" $encodeblacklistFileFormatted.tmp
        
        set f [open $encodeblacklistFileDownloaded]
        set i 0
        set L_Text {}
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            if {[regexp "^#" $L]} {continue}
            
            set Ls [split $L "\t"]
            regsub "chr" [lindex $Ls 0] "" chrom
            set start [lindex $Ls 1]
            set end [lindex $Ls 2]
            set IDencodeblacklist "${chrom}:${start}-${end}"
            set characteristics [lindex $Ls 3]
            
            lappend L_Text "$chrom\t$start\t$end\t$IDencodeblacklist\t$characteristics"
            if {$i>500000} {
                WriteTextInFile [join $L_Text "\n"] $encodeblacklistFileFormatted.tmp
                set L_Text {}
                set i 0
            }
            incr i
        }
        WriteTextInFile [join $L_Text "\n"] $encodeblacklistFileFormatted.tmp
        
        # Sorting of the bedfile:
        # Intersection with very large files can cause trouble with excessive memory usage.
        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n $encodeblacklistFileFormatted.tmp > $encodeblacklistFileFormatted" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkENCODEblacklistFile --"
            puts "sort -k1,1 -k2,2n $encodeblacklistFileFormatted.tmp > $encodeblacklistFileFormatted"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $sortTmpFile
        file delete -force $encodeblacklistFileFormatted.tmp
        file delete -force $encodeblacklistFileDownloaded
        
        close $f
        
        return
    }
}



proc ENCODEblacklistAnnotation {BreakpointChrom BreakpointPos} {
    
    global g_AnnotSV
    global g_ENCODEblacklist_coord
    global g_ENCODEblacklist_charact
    global g_ENCODEblacklist
    
    
    # headerOutput "ENCODE_blacklists_coord_left ENCODE_blacklists_type_left" or "ENCODE_blacklists_coord_right and ENCODE_blacklists_type_right"
    # (ENCODEblacklistAnnotation is executed for each breakpoint)
    set g_ENCODEblacklist(Empty) "\t"
    
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations"
    set encodeblacklistFileFormatted [glob -nocomplain "$extannDir/ENCODEblacklist/$g_AnnotSV(genomeBuild)/*_ENCODEblacklist.sorted.bed"]
    
    if {![info exists g_ENCODEblacklist(DONE)]} {
        
        # Creation of a bedfile with all breakpoints +/- 100 bp:
        # => done during the GC content annotation (if "GC content" annotation is in the output (user defined))
        # FORMAT:  chrom   'breakpoint-100'   'breakpoint+100'   'breakpoint'
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".breakpoints.bed" tmpBreakpointsFile
        set tmpBreakpointsFile "$g_AnnotSV(outputDir)/[file tail $tmpBreakpointsFile]"
        if {![file exists $tmpBreakpointsFile]} {
            file delete -force $tmpBreakpointsFile.tmp
            set i 0
            set L_LinesToWrite {}
            set f [open $g_AnnotSV(bedFile)]
            while {![eof $f]} {
                set L [gets $f]
                if {$L eq ""} {continue}
                set Ls [split $L "\t"]
                set chrom [lindex $Ls 0]
                set start [lindex $Ls 1]
                set end [lindex $Ls 2]
                set start_breakpoint1 [expr $start-100]; if {$start_breakpoint1 < 0} {set start_breakpoint1 0}
                set end_breakpoint1 [expr $start+100]  ; if {$end_breakpoint1 < 0} {set end_breakpoint1 0}
                set start_breakpoint2 [expr $end-100]  ; if {$start_breakpoint2 < 0} {set start_breakpoint2 0}
                set end_breakpoint2 [expr $end+100]    ; if {$end_breakpoint2 < 0} {set end_breakpoint2 0}
                lappend L_LinesToWrite "$chrom\t$start_breakpoint1\t$end_breakpoint1\t$start"
                lappend L_LinesToWrite "$chrom\t$start_breakpoint2\t$end_breakpoint2\t$end"
                incr i
                if {$i>100000} {
                    WriteTextInFile [join [lsort -unique $L_LinesToWrite] "\n"] $tmpBreakpointsFile.tmp
                    set L_LinesToWrite {}
                    set i 0
                }
            }
            close $f
            WriteTextInFile [join [lsort -unique $L_LinesToWrite] "\n"] $tmpBreakpointsFile.tmp
            unset L_LinesToWrite
            
            # Sorting of the bedfile:
            # Intersection with very large files can cause trouble with excessive memory usage.
            # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
            set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
            ReplaceTextInFile "#!/bin/bash" $sortTmpFile
            WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
            WriteTextInFile "export LC_ALL=C" $sortTmpFile
            WriteTextInFile "sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile" $sortTmpFile
            file attributes $sortTmpFile -permissions 0755
            if {[catch {eval exec bash $sortTmpFile} Message]} {
                puts "-- ENCODEblacklistAnnotation, sort --"
                puts "sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
            file delete -force $sortTmpFile
            file delete -force $tmpBreakpointsFile.tmp
            
        }
        
        # Intersect
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.ENCODEblacklist.bed" tmpENCODEblacklistFile
        set tmpENCODEblacklistFile "$g_AnnotSV(outputDir)/[file tail $tmpENCODEblacklistFile]"
        file delete -force $tmpENCODEblacklistFile
        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $encodeblacklistFileFormatted -wa -wb > $tmpENCODEblacklistFile} Message]} {
            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpBreakpointsFile -b $encodeblacklistFileFormatted -wa -wb > $tmpENCODEblacklistFile} Message]} {
                puts "-- ENCODEblacklistAnnotation, intersect --"
                puts "$g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $encodeblacklistFileFormatted -wa -wb > $tmpENCODEblacklistFile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
        }
        
        # Loading g_ENCODEblacklist for each SV breakpoint
        set f [open $tmpENCODEblacklistFile]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            
            set chrom [lindex $Ls 0]
            set breakpoint [lindex $Ls 3]
            #set encodeblacklistChrom [lindex $Ls 4]
            #set encodeblacklistStart [lindex $Ls 5]
            #set encodeblacklistEnd [lindex $Ls 6]
            #set encodeblacklistCoord [lindex $Ls 7]
            #set encodeblacklistCharact [lindex $Ls 8]
            
            lappend g_ENCODEblacklist_coord($chrom,$breakpoint) [lindex $Ls 7]
            lappend g_ENCODEblacklist_charact($chrom,$breakpoint) [lindex $Ls 8]
        }
        
        set g_ENCODEblacklist(DONE) 1
        file delete -force $tmpENCODEblacklistFile
    }
    
    if {[info exist g_ENCODEblacklist_coord($BreakpointChrom,$BreakpointPos)]} {
        return "[join $g_ENCODEblacklist_coord($BreakpointChrom,$BreakpointPos) ";"]\t[join $g_ENCODEblacklist_charact($BreakpointChrom,$BreakpointPos) ";"]"
    } else {
        return $g_ENCODEblacklist(Empty)
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-exac.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


# ExAC downloaded file: "fordist_cleaned_nonpsych_z_pli_rec_null_data.txt"
# Header:
# transcript  gene  chr  n_exons tx_start  tx_end  bp   p_syn  p_mis   p_lof   n_syn   n_mis   n_lof   adj_exp_syn  adj_exp_mis   adj_exp_lof   syn_z   mis_z  lof_z   pLI   pRecessive  pNull

## - Check if the ExAC file has been downloaded:
#    - fordist_cleaned_nonpsych_z_pli_rec_null_data.txt
#
## - Check and create if necessary the following file:
#    - 'date'_ExAC-Zscore.annotations.tsv.gz
proc checkGeneIntoleranceFile {} {
    
    global g_AnnotSV
    
    ## Check if the GeneIntolerance file has been downloaded then formatted
    ######################################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based"
    
    set GeneIntoleranceFileDownloaded [glob -nocomplain "$extannDir/ExAC/fordist_cleaned_nonpsych_z_pli_rec_null_data.txt"]
    set GeneIntoleranceFileFormattedGzip [glob -nocomplain "$extannDir/ExAC/*_GeneIntolerance-Zscore.annotations.tsv.gz"]
    
    if {$GeneIntoleranceFileDownloaded eq "" && $GeneIntoleranceFileFormattedGzip eq ""} {
        # No "Gene Intolerance" annotation
        return
    }
    
    if {[llength $GeneIntoleranceFileFormattedGzip]>1} {
        puts "Several Gene Intolerance files exist:"
        puts "$GeneIntoleranceFileFormattedGzip"
        puts "Keep only one: [lindex $GeneIntoleranceFileFormattedGzip end]\n"
        foreach gi [lrange $GeneIntoleranceFileFormattedGzip 0 end-1] {
            file rename -force $gi $gi.notused
        }
        return
    }
    
    if {$GeneIntoleranceFileFormattedGzip eq ""} {
        ## Create : 'date'_GeneIntolerance-Zscore.annotations.tsv.gz   ; # Header: chr start end syn_z mis_z
        set GeneIntoleranceFileFormatted "$extannDir/ExAC/[clock format [clock seconds] -format "%Y%m%d"]_GeneIntolerance-Zscore.annotations.tsv"
        
        puts "\t...GeneIntolerance configuration for Z scores annotation from ExAC ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        puts "\t\t...creation of $GeneIntoleranceFileFormatted.gz"
        puts "\t\t   (done only once during the first GeneIntolerance annotation)"
        
        set TexteToWrite {genes\tsynZ_ExAC\tmisZ_ExAC}
        foreach L [LinesFromFile $GeneIntoleranceFileDownloaded] {
            if {[regexp  "^transcript" $L]} {
                set i_gene    [lsearch -regexp $L "^gene"]; if {$i_gene == -1} {puts "Bad syntax into $GeneIntoleranceFileDownloaded.\ngene field not found - Exit with error"; exit 2}
                set i_synZ    [lsearch -regexp $L "^syn_z"]; if {$i_synZ == -1} {puts "Bad syntax into $GeneIntoleranceFileDownloaded.\nsyn_z field not found - Exit with error"; exit 2}
                set i_misZ    [lsearch -regexp $L "^mis_z"]; if {$i_misZ == -1} {puts "Bad syntax into $GeneIntoleranceFileDownloaded.\nmis_z field not found - Exit with error"; exit 2}
                continue
            }
            set Ls [split $L "\t"]
            
            set gene [lindex $Ls $i_gene]
            set synZ [lindex $Ls $i_synZ]
            set misZ [lindex $Ls $i_misZ]
            
            lappend TexteToWrite "$gene\t$synZ\t$misZ"
        }
        WriteTextInFile [join $TexteToWrite "\n"] $GeneIntoleranceFileFormatted
        if {[catch {exec gzip $GeneIntoleranceFileFormatted} Message]} {
            puts "-- checkGeneIntoleranceFile --"
            puts "gzip $GeneIntoleranceFileFormatted"
            puts "$Message\n"
        }
        
        file delete -force $GeneIntoleranceFileDownloaded
    }
}


# gene: Gencode ID
# chr: chromosome
# start: genomic coordinate gene start
# end: genomic coordinate gene end
# gene_symbol: HUGO gene symbol
# mean_rd: Average read depth of gene across all individuals
# gc_content: Proportion of gene that is GC
# complexity: sequence complexity
# cds_len: Number of targeted coding bases
# gene_length: Total gene length
# num_targ: Number of targets of the gene included in CNV calling
# segdups: number of pairs of segmental duplications gene is within
# dip: Number of confident diploid calls
# del: Number of confident deletion calls
# dup: Number of confident duplication calls
# del.sing: Number of confident deletion calls spanning only a single gene
# dup.sing: Number of confident duplication calls spanning only a single gene
# del.sing.score: Winsorised single-gene deletion intolerance z-score
# dup.sing.score: Winsorised single-gene duplication intolerance z-score
# del.score: Winsorised deletion intolerance z-score
# dup.score: Winsorised duplication intolerance z-score
# cnv.score: Winsorised cnv intolerance z-score
# flag: Gene is in a known region of recurrent CNVs mediated by tandem segmental duplications and intolerance scores are more likely to be biased or noisy.
#

## - Check if the ExAC file has been downloaded:
#    - exac-final-cnv.gene.scores071316
#
## - Check and create if necessary the following file:
#    - 'date'_ExAC.CNV-Zscore.annotations.tsv.gz
proc checkCNVintoleranceFile {} {
    
    global g_AnnotSV
    
    ## Check if the CNVintoleranceFile has been downloaded then formatted
    ######################################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based"
    
    set CNVintoleranceFileDownloaded [glob -nocomplain "$extannDir/ExAC/exac-final-cnv.gene.scores071316"]
    set CNVintoleranceFileFormattedGzip [glob -nocomplain "$extannDir/ExAC/*_ExAC.CNV-Zscore.annotations.tsv.gz"]
    
    if {$CNVintoleranceFileDownloaded eq "" && $CNVintoleranceFileFormattedGzip eq ""} {
        # No "CNV Intolerance" annotation
        return
    }
    
    if {[llength $CNVintoleranceFileFormattedGzip]>1} {
        puts "Several CNV-Intolerant-Genes files exist:"
        puts "$CNVintoleranceFileFormattedGzip"
        puts "Keep only one: [lindex $CNVintoleranceFileFormattedGzip end]\n"
        foreach ci [lrange $CNVintoleranceFileFormattedGzip 0 end-1] {
            file rename -force $ci $ci.notused
        }
        return
    }
    
    if {$CNVintoleranceFileFormattedGzip eq ""} {
        ## Create : 'date'_ExAC.CNV-Zscore.annotations.tsv.gz ; # Header: genes   delZ_ExAC       dupZ_ExAC       cnvZ_ExAC
        
        set CNVintoleranceFileFormatted "$extannDir/ExAC/[clock format [clock seconds] -format "%Y%m%d"]_ExAC.CNV-Zscore.annotations.tsv"
        
        puts "\t...ExAC CNV Intolerant Genes configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        puts "\t\t...creation of $CNVintoleranceFileFormatted.gz"
        puts "\t\t   (done only once during the first CNV Intolerant Genes  annotation)"
        
        set TexteToWrite {genes\tdelZ_ExAC\tdupZ_ExAC\tcnvZ_ExAC}
        foreach L [LinesFromFile $CNVintoleranceFileDownloaded] {
            
            set Ls [split $L " "]
            
            if {[regexp  "^gene" $Ls]} {
                set i_gene    [lsearch -regexp $Ls "^gene_symbol"]; if {$i_gene == -1} {puts "Bad syntax into $CNVintoleranceFileDownloaded.\ngene_symbol field not found - Exit with error"; exit 2}
                set i_cnvZ    [lsearch -regexp $Ls "^cnv.score"];   if {$i_cnvZ == -1} {puts "Bad syntax into $CNVintoleranceFileDownloaded.\ncnv.score field not found - Exit with error"; exit 2}
                set i_delZ    [lsearch -regexp $Ls "^del.score"];   if {$i_delZ == -1} {puts "Bad syntax into $CNVintoleranceFileDownloaded.\ndel.score field not found - Exit with error"; exit 2}
                set i_dupZ    [lsearch -regexp $Ls "^dup.score"];   if {$i_dupZ == -1} {puts "Bad syntax into $CNVintoleranceFileDownloaded.\ndup.score field not found - Exit with error"; exit 2}
                continue
            }
            
            set gene [lindex $Ls $i_gene]
            set delZ [lindex $Ls $i_delZ]
            set dupZ [lindex $Ls $i_dupZ]
            set cnvZ [lindex $Ls $i_cnvZ]
            
            if {![info exists del($gene)]} {
                set del($gene) $delZ
                set dup($gene) $dupZ
                set cnv($gene) $cnvZ
            } else {
                ## The file has several entries for 63 genes (several "Gencode ID" for 1 "Gene symbo")
                ## We keep the highest value
                if {$delZ > $del($gene)} {set del($gene) $delZ}
                if {$dupZ > $dup($gene)} {set dup($gene) $dupZ}
                if {$cnvZ > $cnv($gene)} {set cnv($gene) $cnvZ}
            }
            
        }
        
        foreach gene [array names del] {
            lappend TexteToWrite "$gene\t$del($gene)\t$dup($gene)\t$cnv($gene)"
        }
        WriteTextInFile [join $TexteToWrite "\n"] $CNVintoleranceFileFormatted
        
        if {[catch {exec gzip $CNVintoleranceFileFormatted} Message]} {
            puts "-- checkCNVintoleranceFile --"
            puts "gzip $CNVintoleranceFileFormatted"
            puts "$Message\n"
        }
        
        file delete -force $CNVintoleranceFileDownloaded
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-exomiser.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################

# Start the REST service for Exomiser
# OUTPUT = pid of the command (or "" if the service has not been successfully started)
proc startTheRESTservice {applicationPropertiesTmpFile port exomiserStartServiceFile} {
    
    global g_AnnotSV
    
    set jarFile [lindex [glob -nocomplain $g_AnnotSV(annotationsDir)/jar/exomiser-rest-prioritiser-*.jar] end]
    
    # Run the service
    
    if {[catch {set idService [eval exec java -Xmx4g -jar $jarFile --server.port=$port --spring.config.location=$applicationPropertiesTmpFile >& $exomiserStartServiceFile &]} Message]} {
        puts "\nWARNING: No Exomiser annotations available."
        puts "The REST service has not been started successfully:"
        puts "java -Xmx4g -jar $jarFile --server.port=$port --spring.config.location=$applicationPropertiesTmpFile >& $exomiserStartServiceFile"
        puts "$Message"
        set g_AnnotSV(hpo) ""
        file delete -force $exomiserStartServiceFile
        set idService ""
    } else {
        # Wait (max 5 minutes) for the start
        set waiting 1
        set i 1
        while {$waiting} {
            after 6000 ; # 6s
            if {[catch {set s [socket localhost $port]} Message]} {
                # The REST service is not started yet, we have the following error message: "couldn't open socket: connection refused"
                incr i
                if {$i eq 50} { ;# 50 x 6s = 5 min
                    set waiting 0
                }
            } else {
                # The REST service has successfully started
                close $s
                set waiting 0
            }
            if {[file exists $exomiserStartServiceFile]} {
                if {[regexp "APPLICATION FAILED TO START|Application run failed" [ContentFromFile $exomiserStartServiceFile]]} {
                    # The REST service failed to start
                    set i 50
                    set waiting 0
                }
                foreach L [LinesFromFile $exomiserStartServiceFile] {
                    if {[regexp "^ERROR" $L]} {
                        puts $L
                        set i 50
                        set waiting 0
                    }
                }
            }
        }
        
        if {$i eq 50} {
            # if the REST service has not started after 10 minutes
            puts "\nWARNING: No Exomiser annotations available."
            puts "The REST service has not been started successfully:"
            puts "java -Xmx4g -jar $jarFile --server.port=$port --spring.config.location=$applicationPropertiesTmpFile >& $exomiserStartServiceFile"
            puts "(see $exomiserStartServiceFile)"
            set g_AnnotSV(hpo) ""
            set idService ""
        } else {
            # The REST service has been successfully started
            puts "\t...idService = $idService\n"
        }
    }
    return $idService
}


## - Check if the exomiser installation is ok
proc checkExomiserInstallation {} {
    
    global g_AnnotSV
    global hpoVersion
    
    
    #    # Check the existence of the "$NCBIandHGNCgeneDir/results.txt" file (for Human annotations)
    #    # Approved symbol Alias symbol    Previous symbol NCBI Gene ID
    #    # A1BG-AS1        FLJ23569        NCRNA00181      503538
    #    set NCBIandHGNCgeneDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/NCBIandHGNCgeneID"
    #    if {![regexp "Human" $g_AnnotSV(organism)]} {
        #        ## Checked the organism: should be "Human"
        #        set g_AnnotSV(hpo) ""
        #    } elseif {![file exists "$NCBIandHGNCgeneDir/results.txt"]} {
        #        ## Checked if the "results.txt" file exists
        #        puts "\nWARNING: No Exomiser annotations available."
        #        puts "...$NCBIandHGNCgeneDir/results.txt doesn't exist"
        #        set g_AnnotSV(hpo) ""
        #    } elseif {![file exists "$NCBIandHGNCgeneDir/geneSymbol_NCBIandHGNCgeneID.tsv"]} {
        #        # Checked if the "geneSymbol_NCBIandHGNCgeneID.tsv" file exists
        #        set L_TextToWrite {"genes\tNCBI_gene_ID"}
        #        foreach L [LinesFromFile "$NCBIandHGNCgeneDir/results.txt"] {
            #            set Ls [split $L "\t"]
            #            set NCBIandHGNCgeneID [lindex $Ls 3]
            #            if {$NCBIandHGNCgeneID eq "" || $NCBIandHGNCgeneID eq "NCBI Gene ID"} {continue}
            #            set ApprovedSymbol [lindex $Ls 0]
            #            if {$ApprovedSymbol ne "" && ![info exist tmp($ApprovedSymbol)]} {set tmp($ApprovedSymbol) 1; lappend L_TextToWrite "$ApprovedSymbol\t$NCBIandHGNCgeneID"}
            #            set AliasSymbol [lindex $Ls 1]
            #            if {$AliasSymbol ne "" && ![info exist tmp($AliasSymbol)]} {set tmp($AliasSymbol) 1; lappend L_TextToWrite "$AliasSymbol\t$NCBIandHGNCgeneID"}
            #            set PreviousSymbol [lindex $Ls 2]
            #            if {$PreviousSymbol ne "" && ![info exist tmp($PreviousSymbol)]} {set tmp($PreviousSymbol) 1; lappend L_TextToWrite "$PreviousSymbol\t$NCBIandHGNCgeneID"}
            #        }
        #        WriteTextInFile [join $L_TextToWrite "\n"] "$NCBIandHGNCgeneDir/geneSymbol_NCBIandHGNCgeneID.tsv"
        #    }
    
    ## Check if the Exomiser data files exist
    ## + HPO citation
    set L_hpoDir [glob -nocomplain $g_AnnotSV(annotationsDir)/Annotations_Exomiser/*]
    set L_hpoDir_ok {}
    foreach hpoDir $L_hpoDir {
        if {[regexp "^(\[0-9\]+)$" [file tail $hpoDir] match hpoDir]} {
            lappend L_hpoDir_ok $hpoDir
        }
    }
    if {$L_hpoDir_ok ne ""} {
        set hpoVersion [lindex [lsort -integer $L_hpoDir_ok] end]
        if {$g_AnnotSV(hpo) ne ""} {
            puts "\tINFO: AnnotSV takes use of Exomiser (Smedley et al., 2015) for the phenotype-driven analysis."
            puts "\tINFO: AnnotSV is using the Human Phenotype Ontology (version $hpoVersion). Find out more at http://www.human-phenotype-ontology.org"
        }
        ## Check the existence of the application properties file
        if {![file exist $g_AnnotSV(etcDir)/application.properties] && ![file exist $g_AnnotSV(annotationsDir)/Annotations_Exomiser/$hpoVersion/application.properties]} {
            puts "\nWARNING: No Exomiser application properties file available"
            puts "...$g_AnnotSV(etcDir)/application.properties doesn't exist\n"
            puts "...$g_AnnotSV(annotationsDir)/Annotations_Exomiser/$hpoVersion/application.properties doesn't exist\n"
            set g_AnnotSV(hpo) ""
        }
    } else {
        puts "\nWARNING: No Exomiser annotations available in $g_AnnotSV(annotationsDir)/Annotations_Exomiser/\n"
        set g_AnnotSV(hpo) ""
    }
    
    return
}



# Creation of the g_Exomiser variable:
# g_Exomiser($geneName) = EXOMISER_GENE_PHENO_SCORE\tHUMAN_PHENO_EVIDENCE\tMOUSE_PHENO_EVIDENCE\tFISH_PHENO_EVIDENCE
# default = "\t-1.0\t\t\t"
# INPUTS:
# L_genes: e.g. "FGFR2"
# L_HPO:   e.g. "HP:0001156,HP:0001363,HP:0011304,HP:0010055"
#
# INFO: This proc is run from "AnnotSV-regulatoryelements.tcl"
proc runExomiser {L_Genes L_HPO} {
    
    global g_AnnotSV
    global hpoVersion
    global g_Exomiser
    
    puts "...running Exomiser on [llength $L_Genes] gene names ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    # Tcl 8.5 is required for use of the json package.
    package require http
    package require json 1.3.3
    
    # Creation of the temporary "application.properties" file
    if {[catch {set port [exec bash $g_AnnotSV(bashDir)/searchForAFreePortNumber.bash]} Message]} {
        puts "$Message"
        puts "WARNING: port is defined to 50000"
        set port 50000
    }
    puts "\t...on port $port"
    
    set applicationPropertiesTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_exomiser_application.properties"
    if {[file exist $g_AnnotSV(etcDir)/application.properties]} {
        set infos [ContentFromFile $g_AnnotSV(etcDir)/application.properties]
    } elseif {[file exist $g_AnnotSV(annotationsDir)/Annotations_Exomiser/$hpoVersion/application.properties]} {
        set infos [ContentFromFile $g_AnnotSV(annotationsDir)/Annotations_Exomiser/$hpoVersion/application.properties]
    }
    regsub "XXXX" $infos "$port" infos
    regsub "YYYY" $infos "$g_AnnotSV(annotationsDir)/Annotations_Exomiser/$hpoVersion" infos
    regsub "ZZZZ" $infos "$hpoVersion" infos
    WriteTextInFile $infos $applicationPropertiesTmpFile
    
    # Start the REST service
    set exomiserStartServiceFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_exomiser.tmp"
    puts "\t...starting the REST service"
    set idService [startTheRESTservice $applicationPropertiesTmpFile $port $exomiserStartServiceFile]
    if {$idService ne ""} {
        # Requests
        foreach geneName $L_Genes {
            # Search the geneID of the geneName
            set geneID [searchforNCBIGeneID $geneName]
            
            # Check if the information exists
            if {$geneID eq ""} {continue}
            
            # Exomiser request
            set url "http://localhost:${port}/exomiser/api/prioritise/?phenotypes=${L_HPO}&prioritiser=hiphive&prioritiser-params=human,mouse,fish,ppi&genes=$geneID"
            if {[catch {
                    set token [::http::geturl $url]
                    set exomiserResult [::http::data $token]
                    ::http::cleanup $token
                    set d_all [::json::json2dict $exomiserResult]
                } Message]} {
                puts "geneName: $geneName"
                puts "$Message\n"
                puts "$url"
                continue
            }
            # The exomiser http request can be used for x genes -> in this case, it returns in the results a list of dictionary, 1 for each gene
            # If the http request is only for 1 gene, the result is a list of 1 dict.
            # => We use only the first element of the results, which is a dict (a list of key-value)
            if {[catch {set d_results [lindex [dict get $d_all "results"] 0]} Message]} {
                continue
            }
            # dict for {theKey theValue} $d_results {
                #    puts "$theKey -> $theValue\n"
                # }
            
            if {[catch {set EXOMISER_GENE_PHENO_SCORE [dict get $d_results "score"]} Message]} {
                continue
            }
            set EXOMISER_GENE_PHENO_SCORE [format "%.4f" $EXOMISER_GENE_PHENO_SCORE]
            
            if {[catch {set d_phenotypeEvidence [dict get $d_results "phenotypeEvidence"]} Message]} {
                continue
            }
            # -> return a list of dictionary, 1 for each organism:
            # puts [llength $d_phenotypeEvidence] ; # = 2 (HUMAN + MOUSE)
            
            #dict for {theKey theValue} [lindex $d_phenotypeEvidence 0] {
                #    puts "$theKey -> $theValue\n"
                #}
            
            # score -> 0.8790527581872061
            #
            # model -> organism HUMAN entrezGeneId 2263 humanGeneSymbol FGFR2 diseaseId OMIM:101600 diseaseTerm {Craniofacial-skeletal-dermatologic dysplasia} phenotypeIds {HP:0000494 HP:0005347 HP:0000452 HP:0003041 HP:0005280 HP:0011304 HP:0000006 HP:0000303 HP:0002308 HP:0006101 HP:0000327 HP:0000586 HP:0000244 HP:0000486 HP:0003795 HP:0002780 HP:0004440 HP:0003196 HP:0003070 HP:0010055 HP:0000238 HP:0000678 HP:0006110 HP:0001249 HP:0000218 HP:0000316 HP:0000453 HP:0002676} id OMIM:101600_2263
            #
            # bestModelPhenotypeMatches -> {query {id HP:0001156 label Brachydactyly} match {id HP:0006101 label {Finger syndactyly}} lcs {id MP:0002110 label {}} ic 2.6619180857144342 simj 0.64 score 1.3052308511743194} {query {id HP:0001363 label Craniosynostosis} match {id HP:0004440 label {Coronal craniosynostosis}} lcs {id HP:0001363 label Craniosynostosis} ic 5.851950660605321 simj 0.9411764705882353 score 2.3468528434490747} {query {id HP:0010055 label {Broad hallux}} match {id HP:0010055 label {Broad hallux}} lcs {id HP:0010055 label {Broad hallux}} ic 7.8438437682151125 simj 1.0 score 2.800686303072001} {query {id HP:0011304 label {Broad thumb}} match {id HP:0011304 label {Broad thumb}} lcs {id HP:0011304 label {Broad thumb}} ic 6.728560751270146 simj 1.0 score 2.5939469445750323}
            set HUMAN_PHENO_EVIDENCE {}
            set MOUSE_PHENO_EVIDENCE {}
            set FISH_PHENO_EVIDENCE  {}
            foreach d_organism $d_phenotypeEvidence {
                if {[catch {set actualOrganism [dict get $d_organism model organism]} Message]} {
                    continue
                } else {
                    catch {lappend ${actualOrganism}_PHENO_EVIDENCE [dict get $d_organism model diseaseTerm]} Message
                    if {[catch {set L_best [dict get $d_organism bestModelPhenotypeMatches]} Message]} {
                        continue
                    } else {
                        foreach d_query $L_best {
                            catch {lappend ${actualOrganism}_PHENO_EVIDENCE  [dict get $d_query query label]} Message
                            catch {lappend ${actualOrganism}_PHENO_EVIDENCE  [dict get $d_query match label]} Message
                        }
                    }
                }
            }
            set HUMAN_PHENO_EVIDENCE [lsort -unique $HUMAN_PHENO_EVIDENCE]
            set MOUSE_PHENO_EVIDENCE [lsort -unique $MOUSE_PHENO_EVIDENCE]
            set FISH_PHENO_EVIDENCE  [lsort -unique $FISH_PHENO_EVIDENCE]
            
            set g_Exomiser($geneName) "$EXOMISER_GENE_PHENO_SCORE\t[join $HUMAN_PHENO_EVIDENCE ";"]\t[join $MOUSE_PHENO_EVIDENCE ";"]\t[join $FISH_PHENO_EVIDENCE ";"]"
        }
        
        # End the REST service
        if {[catch {exec kill -9 $idService} Message]} {
            puts "End the REST service:"
            puts $Message
        }
        
        file delete -force $exomiserStartServiceFile
    }
    
    # Remove tmp files
    file delete -force $applicationPropertiesTmpFile
    
    
    return ""
}


# g_Exomiser($geneName) = EXOMISER_GENE_PHENO_SCORE\tHUMAN_PHENO_EVIDENCE\tMOUSE_PHENO_EVIDENCE\tFISH_PHENO_EVIDENCE
# Return either only the score or all the annotation:
# what = "score" or "all"
proc ExomiserAnnotation {GeneName what} {
    
    global g_Exomiser
    
    if {$what eq "all"} {
        # Return all the annotation (EXOMISER_GENE_PHENO_SCORE HUMAN_PHENO_EVIDENCE MOUSE_PHENO_EVIDENCE FISH_PHENO_EVIDENCE) => for gene annotations
        if {[info exists g_Exomiser($GeneName)]} {
            return $g_Exomiser($GeneName)
        } else {
            return "-1.0\t\t\t"
        }
    } elseif {$what eq "score"} {
        # Return only the score (EXOMISER_GENE_PHENO_SCORE) => for regulatory elements annotations
        if {[info exists g_Exomiser($GeneName)]} {
            return [lindex [split $g_Exomiser($GeneName) "\t"] 0]
        } else {
            return "-1.0"
        }
    } else {
        puts "proc ExomiserAnnotation: Bad option value for \"what\" ($what)"
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-extann.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


proc ExternalAnnotations args {
    
    # To add external annotation to a gene in particular.
    # Files used (defined in AnnotSV-main.tcl):
    # - $g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Annotations_$g_AnnotSV(organism)/Gene-based/*/*.tsv(.gz)
    # - $g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Users/*.tsv(.gz)
    # - all files given with the -externalGeneFiles option
    #
    # Format is tab separated values, 1st line is a header, 1st "genes" column is the gene name, rest is free
    # Typical use would be a gene file containing specific annotations such as tranmission mode, disease, expression...
    # WARNING: shouldn't contain "{" and "}". Replaced here by "(" and ")"
    
    # args :
    #   - $F
    #   - "L_Files"    -return-> Annotation files list
    #   - $F,"Loaded"  -return-> 1
    #   - $F,"L_ID"    -return-> List of all genes from $F
    #   - $F,Header    -return-> Header from $F
    #   - $F,$ID       -return-> Annotation for $ID (= gene) from $F ([lrange $L 1 end])
    
    global g_AnnotSV
    global g_ExtAnnotation
    
    set What [join $args ","]
    if {[info exists g_ExtAnnotation($What)]} {return [set g_ExtAnnotation($What)]}
    
    if {[info exists g_AnnotSV(extann)] && $g_AnnotSV(extann) ne ""} {
        set L_Files_Anno {}
        foreach f [set g_AnnotSV(extann)] {
            if {[lsearch -exact $L_Files_Anno "$f"] eq -1} {
                lappend L_Files_Anno $f
            }
        }
    } else {return ""}
    
    if {[file exists [lindex $args 0]]} {
        set What [join $args ","]
        set L_Files_Anno [lindex $args 0]
    } else {
        set What [join [concat [list $L_Files_Anno] $args] ","]
    }
    
    #puts "--args $args"
    #puts "--$L_Files_Anno"
    #puts "--$What"
    
    if {[info exists g_ExtAnnotation($What)]} {return [set g_ExtAnnotation($What)]}
    foreach File_Anno [lsort $L_Files_Anno] {
        if {![info exists g_ExtAnnotation($File_Anno,Loaded)]} {
            
            if {![info exists g_ExtAnnotation(L_Files)]} {
                set g_ExtAnnotation(L_Files) {}
            }
            lappend g_ExtAnnotation(L_Files) $File_Anno
            
            set First 1
            
            set NbHeaderColumns 0
            
            set g_ExtAnnotation($File_Anno,Loaded) 1
            
            lappend g_ExtAnnotation(display) "\t\t...[file tail $File_Anno]"
            
            if {![info exists g_ExtAnnotation($File_Anno,L_ID)]} {
                set g_ExtAnnotation($File_Anno,L_ID) {}
            }
            if {[regexp ".gz$" $File_Anno]} {
                set lLines [LinesFromGZFile $File_Anno]
            } else {
                set lLines [LinesFromFile $File_Anno]
            }
            foreach L $lLines {
                ## Bug during WritingByGene if "{ or }" are presents.
                ## To be done here, inside each element of the list (not on "$lLines").
                regsub -all "{" $L "(" L
                    regsub -all "}" $L ")" L
                
                if {! [regexp -nocase {[a-z0-9]+} $L] || [regexp -nocase {^[\#]} $L]} {continue}
                
                if {$First} {
                    set First 0
                    if {![regexp -nocase "gene" [lindex [split $L "\t"] 0]]} {
                        puts "\t\tReading $File_Anno:\n\tWARNING: Header is present ($L) but does not contain a \"gene\" named column."
                        set g_ExtAnnotation($File_Anno,Header) ""
                    } else {
                        set g_ExtAnnotation($File_Anno,Header) $L
                        set NbHeaderColumns [llength [split $L "\t"]]
                    }
                    continue
                }
                
                set Ls [split $L "\t"]
                set ID [string trim [lindex $Ls 0]]
                
                if {[llength $Ls] ne $NbHeaderColumns} {puts "WARNING: $ID, format (nb columns) is not good [llength $L] vs $NbHeaderColumns columns"}
                
                if {![info exists g_ExtAnnotation($File_Anno,$ID)]} {
                    lappend g_ExtAnnotation($File_Anno,L_ID) $ID
                } else {
                    puts "WARNING: Reading Annotation file [file tail $File_Anno] and $ID is seen multiple times."
                }
                
                set g_ExtAnnotation($File_Anno,$ID) [join [lrange $Ls 1 end] "\t"]
                
            }
            
            lappend g_ExtAnnotation(display) "\t\t([llength [set g_ExtAnnotation($File_Anno,L_ID)]] gene identifiers and [expr {[llength [split [set g_ExtAnnotation($File_Anno,Header)] "\t"]]-1}] annotations columns: [join [lrange [split [set g_ExtAnnotation($File_Anno,Header)] "\t"] 1 end] ", "])"
            
            if {[info exists g_ExtAnnotation($What)]} {return [set g_ExtAnnotation($What)]}
        }
    }
    return ""
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-filteredVCF.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################



##########################################################################
# Example with "-candidateSnvIndelSamples" = "sample1 sample2"
# -> Prepare 2 new annotation columns: "compound-htz($sample1) compound-htz($sample2)"
#    = List of htz variants (${chrom}_$pos) presents in the gene overlapped by the SV
##########################################################################


proc filteredVCFannotation {GENEchrom GENEstart GENEend Line headerOutput} {
    
    global g_AnnotSV
    global L_htzPos
    global L_samplesFromTheHeader
    
    if {[regexp -nocase ".bed(.gz)?" $g_AnnotSV(SVinputFile)]} { ;# <=> SVinputFile is a BED
        puts "\t...WARNING: The compound heterozygosity analysis is not available from a BED SV input file"
        puts "\t            => That analysis won't be processed!\n"
        set g_AnnotSV(candidateSnvIndelFiles)   ""
        set g_AnnotSV(candidateSnvIndelSamples) ""
        set g_AnnotSV(filteredVCFparsing) "useless"
        return
    }
    
    ## VCFs parsing is done only 1 time (After, g_AnnotSV(filteredVCFparsing) is set to "done")
    if {![info exists g_AnnotSV(filteredVCFparsing)]} {
        set g_AnnotSV(filteredVCFparsing) "done"
        # parsing of $g_AnnotSV(candidateSnvIndelFiles): creation of L_htzPos($chrom,$sample)
        puts "...parsing of candidateSnvIndelFiles for \"$g_AnnotSV(candidateSnvIndelSamples)\" ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        # No htz compound for the full lines
        set L_htzPos(FULL) [lrepeat [llength $g_AnnotSV(candidateSnvIndelSamples)] ""]
        
        # Check if the GT feature is present for at least 1 variant
        set GTabsent 1
        
        # "eval glob" accept regular expression ("*.vcf) as well as a list of files ("sample1.vcf sample2.vcf.gz"):
        foreach vcfF [eval glob -nocomplain $g_AnnotSV(candidateSnvIndelFiles)] {
            puts "\t...parse all positions from $vcfF ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
            if {[regexp -nocase ".gz$" $vcfF]} {
                set f [open "|gzip -cd $vcfF"]
            } else {
                set f [open "$vcfF"]
            }
            while {! [eof $f]} {
                set L [gets $f]
                if {[string range $L 0 5] eq "#CHROM"} {
                    set L_samplesOkFROMvcfF {}
                    foreach sample $g_AnnotSV(candidateSnvIndelSamples) {
                        set i_sample($sample) [lsearch -exact [split $L "\t"] $sample]
                        if {$i_sample($sample) ne -1} {lappend L_samplesOkFROMvcfF $sample}
                    }
                    continue
                }
                if {[string index $L 0] eq "#" || $L eq ""} {continue}
                # set the variables
                set Ls [split $L "\t"]
                set chrom [lindex $Ls 0]
                regsub -nocase "chr" $chrom "" chrom
                set pos [lindex $Ls 1]
                set filter [lindex $Ls 6]
                set formatData [lindex $Ls 8]
                
                # Consider only the SNV/indel (not the SV in the VCF file)
                ##########################################################
                # Example of SV:
                # - Type1: ref="G" and alt="ACTGCTAACGATCCGTTTGCTGCTAACGATCTAACGATCGGGATTGCTAACGATCTCGGG"
                # - Type2: "<INS>", "<DEL>", ...
                # - Type3: complex rearrangements with breakends: "G]17:1584563]"
                set ref [lindex $Ls 3]
                set alt [lindex $Ls 4]
                if {[regexp "<|\\\[|\\\]" $alt]} {continue}
                set variantLength [expr {[string length $ref]-[string length $alt]}]
                if {[expr {abs($variantLength)}]>$g_AnnotSV(SVminSize)} {continue}; # it is an SV
                
                # keep only variant with FILTER == PASS
                if {$g_AnnotSV(snvIndelPASS) && $filter ne "PASS"} {continue}
                foreach sample $L_samplesOkFROMvcfF {
                    set sampleData [lindex $Ls $i_sample($sample)]
                    # set the GT
                    set j_GT [lsearch -exact [split $formatData ":"] "GT"]
                    if {$j_GT eq -1} {continue}
                    set GTabsent 0
                    set GT ""
                    set GTsample [lindex [split $sampleData ":"] $j_GT];# GTsample = 0/2 or 0|1 or "" or ./.
                    if {[lindex [split $GTsample "\[/|\]"] 0] ne [lindex [split $GTsample "\[/|\]"] 1] && $GTsample ne ""} {
                        lappend L_htzPos($chrom,$sample) "$pos"
                    }
                }
            }
            close $f
        }
        if {$GTabsent} {
            puts "\t...WARNING: The SNV/indel genotype is not indicated in the FORMAT column under the “GT” field"
            puts "\t            => Compound heterozygosity analysis won't be processed!"
            set g_AnnotSV(candidateSnvIndelFiles)   ""
            set g_AnnotSV(candidateSnvIndelSamples) ""
        }
        puts ""
    }
    
    set textToReturn {}
    
    if {$GENEchrom eq "FULL"} {
        # No annotation for a full line (an SV can overlap several genes)
        #################################################################
        set textToReturn "$L_htzPos(FULL)"
    } else {
        # Annotation of a split line
        ############################
        
        if {![info exists L_samplesFromTheHeader]} {
            # Done only one time
            # Listing of all the samples in the VCF input files
            regsub ".*FORMAT\t" $headerOutput "" samples
            regsub "\tAnnotation_mode.*" $samples "" samples
            set L_samplesFromTheHeader [split $samples "\t"]
        }
        
        # SVinputFile is a VCF
        # Is the SV detected in each sample from $g_AnnotSV(candidateSnvIndelSamples)?
        # Answer given in the GT of the SV VCF input file (but not from a bedfile)
        if {[info exists g_AnnotSV(formatColNumber)]} { ;# <=> SVinputFile is a VCF
            set formatData [lindex $Line $g_AnnotSV(formatColNumber)]
            set i_gt [lsearch [split $formatData ":"] "GT"]
            foreach sample $L_samplesFromTheHeader valueSample [lrange $Line [expr {$g_AnnotSV(formatColNumber)+1}] end-13] {
                set gt [lindex [split $valueSample ":"] $i_gt]
                if {[regexp "\[1-9\]" $gt]} {
                    set SV($sample) detected
                }
            }
        } else {
            # SVinputFile is a BED
            # => no GT information
            # => SV($sample) has never been defined
            # => No "Compound heterozygosity analysis" (even if asked with the -candidateSnvIndelFiles option)
        }
        
        foreach sample $g_AnnotSV(candidateSnvIndelSamples) {
            # If the SV is not detected in this sample:
            if {![info exists SV($sample)]} {lappend textToReturn ""; continue}
            # if $GENEchrom not present in the VCF file:
            if {![info exists L_htzPos($GENEchrom,$sample)]} {lappend textToReturn ""; continue}
            # List for htz variants
            set i_first [DichotomySearch $GENEstart $L_htzPos($GENEchrom,$sample)]
            set i_last [DichotomySearch $GENEend $L_htzPos($GENEchrom,$sample)]
            if {$GENEstart ne [lindex $L_htzPos($GENEchrom,$sample) $i_first]} {set i_first [expr {$i_first+1}]}
            set sampleText {}
            foreach pos [lsort -unique [lrange $L_htzPos($GENEchrom,$sample) $i_first $i_last]] {
                lappend sampleText "${GENEchrom}_$pos"
            }
            lappend textToReturn [join $sampleText ";"]
        }
    }
    
    return "[join $textToReturn "\t"]"
    
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-gap.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


## - Check if the downloaded "Gap.bed" file or the formatted "*_Gap.sorted.bed" file exist
proc checkGapFile {} {
    
    global g_AnnotSV
    
    ## Check if the gap file has been downloaded then formatted
    #############################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations"
    set gapFileDownloaded [glob -nocomplain "$extannDir/Gap/$g_AnnotSV(genomeBuild)/Gap.bed"]
    set gapFileFormatted [glob -nocomplain "$extannDir/Gap/$g_AnnotSV(genomeBuild)/*_Gap.sorted.bed"]
    
    if {$gapFileDownloaded eq "" && $gapFileFormatted eq ""} {
        # No Gap annotation
        set g_AnnotSV(gapAnn) 0
        return
    } else {
        # Gap annotation
        set g_AnnotSV(gapAnn) 1
        # Check if the user asked for these annotations in the configfile
        set test 0
        foreach col "Gap_left Gap_right" {
            if {[lsearch -exact "$g_AnnotSV(outputColHeader)" $col] ne -1} {set test 1;break}
        }
        if {$test eq 0} {set g_AnnotSV(gapAnn) 0; return}
    }
    
    if {[llength $gapFileFormatted]>1} {
        puts "Several gap files exist:"
        puts "$gapFileFormatted"
        puts "Keep only one: [lindex $gapFileFormatted end]\n"
        foreach gap [lrange $gapFileFormatted 0 end-1] {
            file rename -force $gap $gap.notused
        }
        return
    }
    
    if {$gapFileFormatted eq ""} {
        # The downloaded file exist but not the formatted.
        set gapFileFormatted "$extannDir/Gap/$g_AnnotSV(genomeBuild)/[clock format [clock seconds] -format "%Y%m%d"]_Gap.sorted.bed"
        puts "\t...creation of the \"[file tail $gapFileFormatted]\" file ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])\n\t   (done only once)"
        ReplaceTextInFile "#Chrom\tStart\tEnd\tGap" $gapFileFormatted.tmp
        
        set f [open $gapFileDownloaded]
        set i 0
        set L_Text {}
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            if {[regexp "^#" $L]} {continue}
            
            set Ls [split $L "\t"]
            regsub "chr" [lindex $Ls 0] "" chrom
            set start [lindex $Ls 1]
            set end [lindex $Ls 2]
            set IDgap "${chrom}:${start}-${end}"
            
            lappend L_Text "$chrom\t$start\t$end\t$IDgap"
            if {$i>500000} {
                WriteTextInFile [join $L_Text "\n"] $gapFileFormatted.tmp
                set L_Text {}
                set i 0
            }
            incr i
        }
        WriteTextInFile [join $L_Text "\n"] $gapFileFormatted.tmp
        
        # Sorting of the bedfile:
        # Intersection with very large files can cause trouble with excessive memory usage.
        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n $gapFileFormatted.tmp > $gapFileFormatted" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkGapFile --"
            puts "sort -k1,1 -k2,2n $gapFileFormatted.tmp > $gapFileFormatted"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $sortTmpFile
        file delete -force $gapFileFormatted.tmp
        file delete -force $gapFileDownloaded
        
        close $f
        
        return
    }
}



proc GapAnnotation {BreakpointChrom BreakpointPos} {
    
    global g_AnnotSV
    global g_Gap_type
    global g_Gap_coord
    global g_Gap
    
    
    # headerOutput "Gap_left" or "Gap_right"
    # (GapAnnotation is executed for each breakpoint)
    set g_Gap(Empty) ""
    
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations"
    set gapFileFormatted [glob -nocomplain "$extannDir/Gap/$g_AnnotSV(genomeBuild)/*_Gap.sorted.bed"]
    
    if {![info exists g_Gap(DONE)]} {
        
        # Creation of a bedfile with all breakpoints +/- 100 bp:
        # => done during the GC content annotation (if "GC content" annotation is in the output (user defined))
        # FORMAT:  chrom   'breakpoint-100'   'breakpoint+100'   'breakpoint'
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".breakpoints.bed" tmpBreakpointsFile
        set tmpBreakpointsFile "$g_AnnotSV(outputDir)/[file tail $tmpBreakpointsFile]"
        if {![file exists $tmpBreakpointsFile]} {
            file delete -force $tmpBreakpointsFile.tmp
            set i 0
            set L_LinesToWrite {}
            set f [open $g_AnnotSV(bedFile)]
            while {![eof $f]} {
                set L [gets $f]
                if {$L eq ""} {continue}
                set Ls [split $L "\t"]
                set chrom [lindex $Ls 0]
                set start [lindex $Ls 1]
                set end [lindex $Ls 2]
                set start_breakpoint1 [expr $start-100]; if {$start_breakpoint1 < 0} {set start_breakpoint1 0}
                set end_breakpoint1 [expr $start+100]  ; if {$end_breakpoint1 < 0} {set end_breakpoint1 0}
                set start_breakpoint2 [expr $end-100]  ; if {$start_breakpoint2 < 0} {set start_breakpoint2 0}
                set end_breakpoint2 [expr $end+100]    ; if {$end_breakpoint2 < 0} {set end_breakpoint2 0}
                lappend L_LinesToWrite "$chrom\t$start_breakpoint1\t$end_breakpoint1\t$start"
                lappend L_LinesToWrite "$chrom\t$start_breakpoint2\t$end_breakpoint2\t$end"
                incr i
                if {$i>100000} {
                    WriteTextInFile [join [lsort -unique $L_LinesToWrite] "\n"] $tmpBreakpointsFile.tmp
                    set L_LinesToWrite {}
                    set i 0
                }
            }
            close $f
            WriteTextInFile [join [lsort -unique $L_LinesToWrite] "\n"] $tmpBreakpointsFile.tmp
            unset L_LinesToWrite
            
            # Sorting of the bedfile:
            # Intersection with very large files can cause trouble with excessive memory usage.
            # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
            set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
            ReplaceTextInFile "#!/bin/bash" $sortTmpFile
            WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
            WriteTextInFile "export LC_ALL=C" $sortTmpFile
            WriteTextInFile "sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile" $sortTmpFile
            file attributes $sortTmpFile -permissions 0755
            if {[catch {eval exec bash $sortTmpFile} Message]} {
                puts "-- GapAnnotation, sort --"
                puts "sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
            file delete -force $sortTmpFile
            file delete -force $tmpBreakpointsFile.tmp
            
        }
        
        # Intersect
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.Gap.bed" tmpGapFile
        set tmpGapFile "$g_AnnotSV(outputDir)/[file tail $tmpGapFile]"
        file delete -force $tmpGapFile
        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $gapFileFormatted -wa -wb > $tmpGapFile} Message]} {
            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpBreakpointsFile -b $gapFileFormatted -wa -wb > $tmpGapFile} Message]} {
                puts "-- GapAnnotation, intersect --"
                puts "$g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $gapFileFormatted -wa -wb > $tmpGapFile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
        }
        
        # Loading g_Gap for each SV breakpoint
        set f [open $tmpGapFile]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            
            set chrom [lindex $Ls 0]
            set breakpoint [lindex $Ls 3]
            #set gapchrom [lindex $Ls 6]
            #set gapStart [lindex $Ls 5]
            #set gapEnd [lindex $Ls 6]
            #set gapCoord [lindex $Ls 7]
            lappend g_Gap_coord($chrom,$breakpoint) "[lindex $Ls 7]"
        }
        
        set g_Gap(DONE) 1
        file delete -force $tmpGapFile
    }
    
    if {[info exist g_Gap_coord($BreakpointChrom,$BreakpointPos)]} {
        return "[join $g_Gap_coord($BreakpointChrom,$BreakpointPos) ";"]"
    } else {
        return $g_Gap(Empty)
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-gccontent.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################



## - Check if the following chromFa files has been downloaded:
#    - *chromFa.tar.gz
#
## - Check and create if necessary the following file:
#    - 'date'_genomeBuild_chromFa.fasta
#    - 'date'_genomeBuild_chromFa.chromSizes
proc checkFASTAfiles {} {
    
    global g_AnnotSV
    
    ## Check if the FASTA file has been downloaded then formatted
    ############################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations"
    set FASTAfileDownloaded [glob -nocomplain "$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/*chromFa.tar.gz"]
    set FASTAfileFormatted [glob -nocomplain "$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.fasta"]
    
    if {$FASTAfileDownloaded eq "" && $FASTAfileFormatted eq ""} {
        # No GCcontent annotations requested by the user
        set g_AnnotSV(gcContentAnn) 0
        return
    } else {
        set g_AnnotSV(gcContentAnn) 1
        # Check if the user asked for these annotations in the configfile
        set test 0
        foreach col "GC_content_left GC_content_right" {
            if {[lsearch -exact "$g_AnnotSV(outputColHeader)" $col] ne -1} {set test 1;break}
        }
        if {$test eq 0} {set g_AnnotSV(gcContentAnn) 0; return}
    }
    
    if {$FASTAfileFormatted eq ""} {
        # The downloaded file exist but not the formatted:
        updateFASTAfiles
    }
}

proc updateFASTAfiles {} {
    
    global g_AnnotSV
    
    if {[catch {package require tar} Message]} {
        puts "Tcl package \"tar\" is required for GC content annotations."
        puts "$Message"
        puts "-> no GC content annotations.\n"
        set g_AnnotSV(gcContentAnn) 0
        return
    }
    
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations"
    set FASTAfileDownloaded [glob -nocomplain "$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/*chromFa.tar.gz"]
    set FASTAfileFormatted "$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.fasta"
    set ChromSizesFile "$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.chromSizes"
    
    puts "\t...GC content configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    puts "\t\t...creation of $FASTAfileFormatted"
    puts "\t\t   (done only once during the first GC content annotation)"
    
    # Extracting files from the .tar.gz file
    set chan [open "|gzip -cd $FASTAfileDownloaded"]
    ::tar::untar $chan -chan -dir "$extannDir/GCcontent/$g_AnnotSV(genomeBuild)"
    
    # Merging in a unique file ($FASTAfileFormatted)
    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
        if {$g_AnnotSV(genomeBuild) eq "GRCh37"} {
            set PathGB "$g_AnnotSV(genomeBuild)"
        } elseif {[regexp "GRCh38|CHM13" $g_AnnotSV(genomeBuild)]} {
            set PathGB "$g_AnnotSV(genomeBuild)/chroms"
        } elseif {$g_AnnotSV(genomeBuild) eq "mm9"} {
            set PathGB "$g_AnnotSV(genomeBuild)"
        } elseif {$g_AnnotSV(genomeBuild) eq "mm10"} {
            set PathGB "$g_AnnotSV(genomeBuild)"
        } elseif {$g_AnnotSV(genomeBuild) eq "mm39"} {
            set PathGB "$g_AnnotSV(genomeBuild)"
        }
        if {![file exists $extannDir/GCcontent/$PathGB/chr$chrom.fa]} {continue}
        WriteTextInFile [exec sed "s/chr//" $extannDir/GCcontent/$PathGB/chr$chrom.fa] $FASTAfileFormatted
        if {![regexp "Y|M" $chrom]} {
            set wcValue [exec wc $extannDir/GCcontent/$PathGB/chr$chrom.fa]
            set nbChars [lindex $wcValue 2]
            set nLignes [lindex $wcValue 0]
            # puts "wcValue $wcValue; nbChars $nbChars; nLignes $nLignes"
            WriteTextInFile "$chrom\t[expr {$nbChars-$nLignes-[string length ">chr$chrom"]}]" $ChromSizesFile ; # Removing of the header and "\n" characters
            # WARNING for chrY:
            # >chrY dna:chromosome chromosome:GRCh37:Y:2649521:59034049:1
            # The chr Y doesn't begin at the 1th position => The length of the sequence doesn't correspond to the length of the chrom Y
        }
    }
    
    foreach tmpFile [glob -nocomplain "$extannDir/GCcontent/$PathGB/chr*.fa"] {
        file delete -force $tmpFile
    }
    file delete -force $extannDir/GCcontent/$g_AnnotSV(genomeBuild)/chroms
    
    # index file generation
    ReplaceTextInFile "1\t150000\t150200" $extannDir/GCcontent/test.bed
    catch {exec bedtools nuc -fi $FASTAfileFormatted -bed $extannDir/GCcontent/test.bed} Message
    file delete -force $extannDir/GCcontent/test.bed
    
    file delete -force $FASTAfileDownloaded
    
}



proc GCcontentAnnotation {BreakpointChrom BreakpointPos} {
    
    global g_AnnotSV
    global g_GCcontent
    
    
    # headerOutput "GC_content_left GC_content_right"
    # GCcontentAnnotation is executed for each breakpoint:
    # - the left breakpoint -> GC_content_left
    # - the right one -> GC_content_right
    set g_GCcontent(Empty) "" ; # Ok, no "\t" because we return only one value for each procedure call
    
    # Checking with the size of the chrom is needed
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations"
    set ChromSizesFile "$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.chromSizes"
    foreach L [LinesFromFile $ChromSizesFile] {
        set sizeOf([lindex $L 0]) [lindex $L 1]
    }
    
    set FASTAfileFormatted [glob -nocomplain "$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.fasta"]
    
    
    if {![info exists g_GCcontent(DONE)]} {
        
        # Creation of a bedfile with all breakpoints +/- 100 bp:
        # FORMAT:  chrom   'breakpoint-100'   'breakpoint+100'   'breakpoint'
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".breakpoints.bed" tmpBreakpointsFile
        set tmpBreakpointsFile "$g_AnnotSV(outputDir)/[file tail $tmpBreakpointsFile]"
        file delete -force $tmpBreakpointsFile.tmp
        file delete -force $tmpBreakpointsFile
        set i 0
        set L_LinesToWrite {}
        set f [open $g_AnnotSV(bedFile)]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            set chrom [lindex $Ls 0]
            set start [lindex $Ls 1]
            set end [lindex $Ls 2]
            set start_breakpoint1 [expr $start-100]; if {$start_breakpoint1 < 0} {set start_breakpoint1 0}
            set end_breakpoint1 [expr $start+100]  ; if {$end_breakpoint1 < 0} {set end_breakpoint1 0}
            if {[info exists sizeOf($chrom)] && $end_breakpoint1 > $sizeOf($chrom)} {
                # The start of the SV is near to the end of the chromosome
                if {$start_breakpoint1 < $sizeOf($chrom)} {
                    set end_breakpoint1 $sizeOf($chrom)
                }
            }
            set start_breakpoint2 [expr $end-100]  ; if {$start_breakpoint2 < 0} {set start_breakpoint2 0}
            set end_breakpoint2 [expr $end+100]    ; if {$end_breakpoint2 < 0} {set end_breakpoint2 0}
            if {[info exists sizeOf($chrom)] && $end_breakpoint2 > $sizeOf($chrom)} {
                # The end of the SV corresponds (or is near) to the end of the chromosome
                if {$start_breakpoint2 < $sizeOf($chrom)} {
                    set end_breakpoint2 $sizeOf($chrom)
                }
            }
            
            lappend L_LinesToWrite "$chrom\t$start_breakpoint1\t$end_breakpoint1\t$start"
            lappend L_LinesToWrite "$chrom\t$start_breakpoint2\t$end_breakpoint2\t$end"
            incr i
            if {$i>100000} {
                WriteTextInFile [join [lsort -unique $L_LinesToWrite] "\n"] $tmpBreakpointsFile.tmp
                set L_LinesToWrite {}
                set i 0
            }
        }
        close $f
        WriteTextInFile [join [lsort -unique $L_LinesToWrite] "\n"] $tmpBreakpointsFile.tmp
        unset L_LinesToWrite
        
        # Sorting of the bedfile
        if {[catch {exec $g_AnnotSV(bedtools) sort -i $tmpBreakpointsFile.tmp > $tmpBreakpointsFile} Message]} {
            puts "-- GCcontentAnnotation, sort --"
            puts "$g_AnnotSV(bedtools) sort -i $tmpBreakpointsFile.tmp > $tmpBreakpointsFile"
            puts "$Message"
        }
        file delete -force $tmpBreakpointsFile.tmp
        
        # Intersect
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".GCcontent.txt" tmpNucFile
        set tmpNucFile "$g_AnnotSV(outputDir)/[file tail $tmpNucFile]"
        file delete -force $tmpNucFile
        if {[catch {exec $g_AnnotSV(bedtools) nuc -fi $FASTAfileFormatted -bed $tmpBreakpointsFile > $tmpNucFile} Message]} {
            if {$Message ne "Warning: the index file is older than the FASTA file."} {
                puts "-- GCcontentAnnotation, nuc --"
                puts "$g_AnnotSV(bedtools) nuc -fi $FASTAfileFormatted -bed $tmpBreakpointsFile > $tmpNucFile"
                puts "$Message"
            }
        }
        # file delete -force $tmpBreakpointsFile; "tmpBreakpointsFile" is used later for the other breakpoints annotation!
        
        # Loading g_GCcontent for each SV breakpoint
        set f [open $tmpNucFile]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            if {[regexp "_pct_gc" $L]} {
                set i_gc [lsearch -regexp $Ls "_pct_gc"]
                set i_n [lsearch -regexp $Ls "_num_N"]
                set i_oth [lsearch -regexp $Ls "_num_oth"]
                continue
            }
            set chrom [lindex $Ls 0]
            set breakpoint [lindex $Ls 3]
            set gcPercent [format "%.3f" [lindex $Ls $i_gc]]
            set numN [lindex $Ls $i_n]
            set numOth [lindex $Ls $i_oth]
            # Change metrics from "." to ","
            if {[set g_AnnotSV(metrics)] eq "fr"} {
                regsub -all {\.} $gcPercent "," gcPercent
            }
            set g_GCcontent($chrom,$breakpoint) $gcPercent
            if {$numN ne "0"} {
                if {$numOth ne "0"} {append g_GCcontent($chrom,$breakpoint) " ($numN N, $numOth Oth)"} else {append g_GCcontent($chrom,$breakpoint) " ($numN N)"}
            } elseif {$numOth ne "0"} {append g_GCcontent($chrom,$breakpoint) " ($numOth Oth)"}
        }
        
        set g_GCcontent(DONE) 1
        file delete -force $tmpNucFile
    }
    
    if {[info exist g_GCcontent($BreakpointChrom,$BreakpointPos)]} {
        return $g_GCcontent($BreakpointChrom,$BreakpointPos)
    } else {
        return $g_GCcontent(Empty)
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-gencc.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################




### GenCC
#####################################
# GenCC downloaded file: https://search.thegencc.org/download/action/submissions-export-tsv
#
# Header:
# "uuid","gene_curie","gene_symbol","disease_curie","disease_title","disease_original_curie","disease_original_title","classification_curie","classification_title","moi_curie","moi_title","submitter_curie","submitter_title","submitted_as_hgnc_id","submitted_as_hgnc_symbol","submitted_as_disease_id","submitted_as_disease_name","submitted_as_moi_id","submitted_as_moi_name","submitted_as_submitter_id","submitted_as_submitter_name","submitted_as_classification_id","submitted_as_classification_name","submitted_as_date","submitted_as_public_report_url","submitted_as_notes","submitted_as_pmids","submitted_as_assertion_criteria_url","submitted_as_submission_id","submitted_run_date"

## - Check if the following GenCC file has been downloaded:
#    - submissions-export-tsv
#
## - Check and create if necessary the following file:
#    - 'date'_GenCC.sorted.tsv.gz
proc checkGenCCgeneFile {} {
    
    global g_AnnotSV
    
    ## Check if the "GenCC gene" file has been downloaded then formatted
    #################################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based"
    set GenCCfileDownloaded [glob -nocomplain "$extannDir/GenCC/submissions-export-tsv"]
    set GenCCfileFormattedGzip [glob -nocomplain "$extannDir/GenCC/*_GenCC.tsv" "$extannDir/GenCC/*_GenCC.tsv.gz"]
    
    if {$GenCCfileDownloaded eq "" && $GenCCfileFormattedGzip eq ""} {
        # No "GenCC gene" annotation (with extAnn procedure)
        return
    }
    
    if {[llength $GenCCfileFormattedGzip]>1} {
        puts "Several GenCC files exist:"
        puts "$GenCCfileFormattedGzip"
        puts "Keep only one: [lindex $GenCCfileFormattedGzip end]\n"
        foreach gencc [lrange $GenCCfileFormattedGzip 0 end-1] {
            file rename -force $gencc $gencc.notused
        }
        return
    }
    
    if {$GenCCfileFormattedGzip eq ""} {
        # The downloaded file exist but not the formatted.
        ## Create : 'date'_GenCC.tsv.gz
        updateGenCCgeneFile
    }
}

proc updateGenCCgeneFile {} {
    
    global g_AnnotSV
    
    if {[catch {package require csv} Message]} {
        puts "Tcl package \"csv\" is required for GenCC gene annotations."
        puts "$Message"
        puts "-> no GenCC gene annotations.\n"
        # No "GenCC gene" annotation (with extAnn procedure)
        return
    }
    
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based"
    set GenCCfileDownloaded [glob -nocomplain "$extannDir/GenCC/submissions-export-tsv"]
    
    ## Create : 'date'_GenCC.tsv.gz
    set GenCCfileFormatted "$extannDir/GenCC/[clock format [clock seconds] -format "%Y%m%d"]_GenCC.tsv"
    
    puts "\t...GenCC genes configuration"
    puts "\t\t...creation of $GenCCfileFormatted.gz"
    puts "\t\t   (done only once during the first GenCC annotation)"
    
    set TexteToWrite {genes\tGenCC_disease\tGenCC_moi\tGenCC_classification\tGenCC_pmid}
    foreach L [LinesFromFile $GenCCfileDownloaded] {
        if {[regexp  "^\"uuid" $L]} {
            set ntext "field not found - Exit with error"
            set Ls [::csv::split $L "\t"]
            set i_gene    [lsearch -regexp $Ls "gene_symbol"];         if {$i_gene == -1} {puts "Bad syntax into $GenCCfileDownloaded.\ngene_symbol $ntext"; exit 2}
            set i_disease [lsearch -regexp $Ls "disease_title"];       if {$i_disease == -1} {puts "Bad syntax into $GenCCfileDownloaded.\ndisease_title $ntext"; exit 2}
            set i_moi     [lsearch -regexp $Ls "moi_title"];           if {$i_moi == -1} {puts "Bad syntax into $GenCCfileDownloaded.\nmoi_title $ntext"; exit 2}
            set i_classif [lsearch -regexp $Ls "classification_title"]; if {$i_classif == -1} {puts "Bad syntax into $GenCCfileDownloaded.\nclassification_title $ntext"; exit 2}
            set i_pmid    [lsearch -regexp $Ls "submitted_as_pmids"];  if {$i_pmid == -1} {puts "Bad syntax into $GenCCfileDownloaded.\nsubmitted_as_pmids $ntext"; exit 2}
            continue
        }
        set Ls [::csv::split $L "\t"]
        
        set gene [lindex $Ls $i_gene]
        lappend L_genes "$gene"
        set disease [lindex $Ls $i_disease]
        set moi [lindex $Ls $i_moi]
        set classif [lindex $Ls $i_classif]
        set pmid [lindex $Ls $i_pmid]
        
        # 05/09/2024 - Issue #250 (bad GenCC file)
        # 04/28/2025 - Bug always present:
        #   DHX9    "   AD  Strong  37369308;37467750
        #   FLVCR1  ";FLVCR1-related retinopathy with or without ataxia;posterior column ataxia-retinitis pigmentosa syndrome   AR  ...
        # $disease should not be equal to "\""
        if {$disease ne "" && $disease ne "\""} {
            lappend L_disease($gene) "$disease"
        }
        if {[regexp -nocase "Autosomal dominant" $moi]} {
            if {[regexp -nocase "with maternal imprinting" $moi]} {
                set moi "ADm"
            } elseif {[regexp -nocase "with paternal imprinting" $moi]} {
                set moi "ADp"
            } else {
                set moi "AD"
            }
        } elseif {[regexp -nocase "Autosomal recessive" $moi]} {
            set moi "AR"
        } elseif {[regexp -nocase "Digenic" $moi]} {
            set moi "2G"
        } elseif {[regexp -nocase "Mitochondrial" $moi]} {
            set moi "MT"
        } elseif {[regexp -nocase "Semidominant" $moi]} {
            set moi "sD"
        } elseif {[regexp -nocase "Somatic mosaicism" $moi]} {
            set moi "SOM"
        } elseif {[regexp -nocase "X-linked" $moi]} {
            if {[regexp -nocase "dominant" $moi]} {
                set moi "XLD"
            } elseif {[regexp -nocase "recessive" $moi]} {
                set moi "XLR"
            } else {
                set moi "XL"
            }
        } elseif {[regexp -nocase "Y-linked" $moi]} {
            if {[regexp -nocase "dominant" $moi]} {
                set moi "YLD"
            } elseif {[regexp -nocase "recessive" $moi]} {
                set moi "YLR"
            } else {
                set moi "YL"
            }
        } else {
            set moi ""
        }
        
        if {$moi ne ""} {
            lappend L_moi($gene) "$moi"
            #lappend all_moi $moi ;# To use during the annotation update (and see if new moi is used by GenCC)
            if {[regexp -nocase "incomplete penetrance|Reduced penetrance" $L]} {
                lappend L_moi($gene) "IPVE"
            }
        }
        if {$classif ne "" && $classif ne "\""} {
            lappend L_classif($gene) "$classif"
        }
        regsub -all "\"" $pmid "" pmid
        if {$pmid ne ""} {
            regsub -all " ," $pmid ";" pmid
            regsub -all "," $pmid ";" pmid
            regsub -all " " $pmid ";" pmid
            foreach p [split "$pmid" ";"] {
                if {$p eq 0} {continue}
                if {$p eq ""} {continue}
                lappend L_pmid($gene) $p
            }
        }
    }
    #puts [join [lsort -unique $all_moi] "\n"]; exit
    
    # Write outputfile (will be used as external annotation)
    set L_genes [lsort -unique $L_genes]
    puts "\t"
    foreach gene $L_genes {
        if {![isARefSeqGeneName $gene] && ![isAnENSEMBLgeneName $gene]} {continue}
        if {[info exists L_disease($gene)]}   {set a [join [lsort -unique $L_disease($gene)] ";"]}  else {set a ""}
        if {[info exists L_moi($gene)]}       {set b [join [lsort -unique $L_moi($gene)] ";"]}      else {set b ""}
        if {[info exists L_classif($gene) ]}  {set c [join [lsort -unique $L_classif($gene) ] ";"]} else {set c ""}
        if {[info exists L_pmid($gene)]}      {set d [join [lsort -unique $L_pmid($gene)] ";"]}     else {set d ""}
        
        set L_toWrite "$gene\t$a\t$b\t$c\t$d"
        lappend TexteToWrite $L_toWrite
    }
    
    WriteTextInFile [join $TexteToWrite "\n"] $GenCCfileFormatted
    if {[catch {exec gzip $GenCCfileFormatted} Message]} {
        puts "-- updateGenCCgeneFile --"
        puts "gzip $GenCCfileFormatted"
        puts "$Message\n"
    }
    
    file delete -force $GenCCfileDownloaded
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-general.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


proc DescendingSortOnElement0 {X Y {N 0}} {
    return [expr {[lindex $X $N]<[lindex $Y $N]}]
}
proc DescendingSortOnElement1 {X Y {N 1}} {
    return [expr {[lindex $X $N]<[lindex $Y $N]}]
}
proc DescendingSortOnElement2 {X Y {N 2}} {
    return [expr {[lindex $X $N]<[lindex $Y $N]}]
}
proc AscendingSortOnElement0 {X Y {N 0}} {
    return [expr {[lindex $X $N]>[lindex $Y $N]}]
}
proc AscendingSortOnElement1 {X Y {N 1}} {
    return [expr {[lindex $X $N]>[lindex $Y $N]}]
}
proc AscendingSortOnElement2 {X Y {N 2}} {
    return [expr {[lindex $X $N]>[lindex $Y $N]}]
}
proc AscendingSortOnElement4 {X Y {N 4}} {
    return [expr {[lindex $X $N]>[lindex $Y $N]}]
}
proc AscendingSortOnElement5 {X Y {N 5}} {
    return [expr {[lindex $X $N]>[lindex $Y $N]}]
}

##############################################################################
#                          WORKING WITH FILES
##############################################################################
proc FirstLineFromFile {{File ""}} {
    
    if {[regexp ".gz$" $File]} {
        set F [open "|gzip -cd $File"]
    } else {
        set F [open "$File"]
    }
    
    set L_Lines {}
    set First 1
    
    while {[gets $F Line]>=0} {
        if {$First} {set First 0;break}
    }
    
    return $Line
}

proc ContentFromFile {{File ""}} {
    if {[string equal $File ""]} {return ""}
    set f     [open $File r]
    set Text [read -nonewline $f]
    close $f
    return $Text
}

proc LinesFromFile {{File ""}} {
    return [split [ContentFromFile $File] "\n"]
}

proc ContentFromGZFile {{File ""}} {
    if {[string equal $File ""]} {return ""}
    set f     [open "|gzip -cd $File" r]
    set Texte [read -nonewline $f]
    close $f
    return $Texte
}

proc LinesFromGZFile {{File ""}} {
    return [split [ContentFromGZFile $File] "\n"]
}

proc ReplaceTextInFile {NewText fichier} {
    set    fifi [open $fichier w]
    puts  $fifi $NewText
    close $fifi
    return 1
}


proc WriteTextInFile {text fichier} {
    set    fifi [open $fichier a]
    puts  $fifi $text
    close $fifi
    return 1
}



##############################################################################
#                          Settings of the annotSV_ID
##############################################################################

# INPUT: "${chrom}_${pos}_${end}_${svtype}" "$ref" "$alt"
# For <INS>: alt = "alt_insertedseq" or "alt_svlen"
# For <TRA>: alt = "alt_chr2_end"
proc settingOfTheAnnotSVID {deb ref alt} {
    global g_ID
    global g_deb
    
    set result [split [removeREFinBracketedALT $ref $alt] "\t"]
    set ref [lindex $result 0]
    set alt [lindex $result 1]
    
    if {![info exists g_ID($deb,$ref,$alt)]} {
        set i 1
        while {[info exists g_deb(${deb}_$i)]} {incr i; continue}
        set g_deb(${deb}_$i) "1"
        set g_ID($deb,$ref,$alt) "${deb}_$i"
    }
    
    return $g_ID($deb,$ref,$alt)
}


# - Remove the REF from the bracketed ALT
# - Replace "][" with ";"
proc removeREFinBracketedALT {ref alt} {
    # Used only for square-bracketed SV:
    # => because for BND rescue, the REF is replaced by "N".
    # => a new AnnotSV_ID would be attribute to the BND rescue, even if the 1st BND exists)
    #
    # Examples:
    # INS: T TAAAA[13:5000[ => N NAAAA[13:5000[
    # INS: T ]13:5000]AAAAT => N ]13:5000]AAAAN
    # DEL: T ]22:3000]A => N ]22:3000]N
    if {[regexp "(\[acgtnACGTN\]*)(\\\[|\\\])(\[^:\]+):(\[0-9\]+)(\\\[|\\\])(\[acgtnACGTN\]*)" $alt match baseLeft bracketLeft inBracketChrom inBracketStart bracketRight baseRight]} {
        if {[string length $baseLeft] > 1 } {
            # INS, keep the inserted seq
            regsub -nocase "^$ref" $baseLeft "" baseLeft
        } elseif {[string length $baseRight] > 1} {
            # INS, keep the inserted seq
            regsub -nocase "$ref$" $baseRight "" baseRight
        } else {
            # Not INS, remove REF from ALT
            set baseLeft ""
            set baseRight ""
        }
        set alt "$baseLeft$bracketLeft${inBracketChrom}:$inBracketStart$bracketRight$baseRight"
        
        # L_squBrack_SV_ID_Written (VCFsToBED): lappend add "\" before "]" => we remove all []
        regsub -all "\\\]|\\\[" "$alt" ";" alt
        
        # REF is included in bracketed ALT. No need to compare for AnnotSV_ID (else, bug because REF can be replace by "N" for the BND rescue)
        set ref ""
    }
    
    return "$ref\t$alt"
}


##############################################################################
#                          WORKING WITH rsID
##############################################################################

proc isNotAnRS {rs} {
    if {[regexp "^rs\[0-9\]+$" $rs]} {return 0} else {return 1}
}

##############################################################################
#                     WORKING WITH ANNOTATION LIST
##############################################################################

# Example:
# 1 annotation file (F1) with 2 annotation columns (C1 and C2) by gene
# (numberOfAnnCol = 2)
#
# Input (= a list):
# -----------------
# Annotations for the gene1: g1C1 g1C2
# Annotations for the gene2: g2C1 g2C2
# Annotations for the gene3:  ""   ""

# <=> Input = L_ann = {g1C1\tg1C2} {g2C1\tg2C2}} {\t}
#
# Output (= a tsv text):
# ----------------------
# Annotation desired for g1;g2;g3:
# <=> Output = L_newAnn = "g1C1;g2C1;g3C1\tg1C2;g2C2;g3C2"
#
proc MergeAnnotation {L_ann numberOfannCol} {

# There is only one gene annotation => no need to merge
if {[llength $L_ann] eq 1} {
    return [join $L_ann]
}

# Merge genes annotations
set g 0
set L_ig {}
foreach geneAnn $L_ann {          ;# geneAnn = g1C1\tg1C2
    lappend L_ig $g
    if {$geneAnn eq ""} {
        set tann($g,0) "" ; # With 1 annotation column: An empty string can not be split and can not return a colAnn value => don't enter in the following foreach
    } else {
        set c 0
        foreach colAnn [split $geneAnn "\t"] {    ;# colAnn = g1C1
            set tann($g,$c) $colAnn               ;# tann($g,$c) = g1C1
            incr c
        }
    }
    incr g
}
set L_newAnn {}
set c 0
while {$c < $numberOfannCol} {
    set annByCol ""
    foreach g $L_ig {
        lappend annByCol $tann($g,$c)
    }
    incr c
    set 1ann [join $annByCol ";"]
    regsub -all ";;+" $1ann ";" 1ann
    regsub "^;" $1ann "" 1ann
    regsub ";$" $1ann "" 1ann
    lappend L_newAnn $1ann
}
set toreturn [join $L_newAnn "\t"]

return $toreturn
}


proc RemoveRedundancyWithoutSorting {List} {
set newList {}
foreach element $List {
    if {[lsearch -exact $newList "$element"] eq -1} {
        lappend newList $element
    }
}
return $newList
}



##############################################################################
#                          WORKING WITH SV TYPE
##############################################################################

proc normalizeSVtype {SVtype} {

# SVtype in which category: DUP? DEL? INV? INS? ""?
if {[regexp -nocase "del|loss|<CN0>|<CN1>" $SVtype]} {
    set SVtype "DEL"
} elseif {[regexp -nocase "dup|gain|MCNV" $SVtype ]} {
    set SVtype "DUP"
} elseif {[regexp -nocase "<CN(\[0-9\]+)>" $SVtype match i]} {
    if {$i>1} {set SVtype "DUP"}
} elseif {[regexp -nocase "inv" $SVtype]} {
    set SVtype "INV"
} elseif {[regexp -nocase "ins|MEI|alu|line|sva" $SVtype]} { ;# "DEL_ALU" is set to "DEL", OK!
    set SVtype "INS"
} elseif {[regexp -nocase "TRA|TRN" $SVtype ]} {
    set SVtype "TRA"
} else {
    set SVtype ""
}

return $SVtype
}

##############################################################################
#                          WORKING WITH bedFile
##############################################################################

# - Create a formatted file (*.formatted.bed)
# - If the bed file is located in the "Users" directory, create also a *.header.tsv file (if it doesn't exist yet)
proc checkBed {bedFile {bedDir ""} {mergeOverlap 0}} {

global g_AnnotSV

regsub -nocase ".bed$" $bedFile ".formatted.bed" newBed
if {$bedDir eq ""} {
    set newBed "$g_AnnotSV(outputDir)/[file tail $newBed]"
} else {
    set newBed "$bedDir/[file tail $newBed]"
}

if {[file exists $newBed]} {return 1}

# Bedfile should be sorted, should not have "chr" in the first column, should not have 2 identical lines
##############################################################################################################################################
# If mergeOverlap is set to 1, should not have overlapping lines

# Removing non-standard contigs (other than the standard 1-22,X,Y,MT) and remove "chr" if present
# Check that the length is the same in each line of the bed file
set f [open $bedFile]
set test 0
set L_length {}
set header ""
while {![eof $f]} {
    set L [gets $f]
    if {$L eq ""} {continue}
    # For each tab separated value, any leading or trailing white space is removed
    set Ls [split $L "\t"]
    set newLs ""
    foreach val $Ls {
        lappend newLs [string trim $val]
    }
    set L [join $newLs "\t"]
    
    if {[regexp "^#" $L]} {set header $L; continue}
    if {[regsub "chr" [lindex $L 0] "" chrom] ne 0} {
        lappend L_Text($chrom) "[string range $L 3 end]"
    } else {
        lappend L_Text($chrom) "$L"
    }
    lappend L_length [llength [split $L "\t"]]
}
close $f

# With or without annotations?
set L_length [lsort -unique $L_length]
if {[llength $L_length] ne 1} {
    puts "$bedFile: Unexpected file format, not the same length for each line."
    puts "\t-> not using the associated annotations"
    set UseAnn 0
} else {
    if {$L_length > 3} {set UseAnn 1} else {set UseAnn 0}
}

# Creation of the *.header.tsv file (if the bed file is located in the "Users" directory)
if {[regexp "/Users/" $bedFile]} {
    regsub -nocase "(.formatted)?.bed$" $bedFile ".header.tsv" userHeaderFile
    if {![file exists $userHeaderFile]} {
        if {[llength [split $header "\t"]] eq $L_length} {
            WriteTextInFile $header $userHeaderFile
        } else {
            WriteTextInFile "[join [lrepeat $L_length ""] "\t"]" $userHeaderFile
        }
    }
}

foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
    if {![info exists L_Text($chrom)]} {continue}
    
    ## Remove identical lines (due to liftover_to_hg19 for example)
    set L_Text($chrom) [lsort -unique $L_Text($chrom)]
    
    ## Put in karyotypic order
    set L_Text($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_Text($chrom)]]
    
    if {$mergeOverlap} {
        ## Merge overlapping lines
        set L_newText {}
        set Ls [split [lindex $L_Text($chrom) 0] "\t"]
        set previousStart [lindex $Ls 1]
        set previousEnd [lindex $Ls 2]
        if {$UseAnn} {
            set j 3
            while {$j < $L_length} {
                set previousAnnotations($j) "[lindex $Ls $j]"
                incr j
            }
        }
        foreach L [lrange $L_Text($chrom) 1 end] {
            set Ls [split $L "\t"]
            set start [lindex $Ls 1]
            set end [lindex $Ls 2]
            if {$UseAnn} {
                set j 3
                while {$j < $L_length} {
                    set annotations($j) "[lindex $Ls $j]"
                    incr j
                }
            }
            if {$start < $previousEnd} {
                if {$end > $previousEnd} {set previousEnd $end}
                if {$UseAnn} {
                    set j 3
                    while {$j < $L_length} {
                        set previousAnnotations($j) "$previousAnnotations($j)/$annotations($j)"
                        incr j
                    }
                }
            } else {
                if {$UseAnn} {
                    set n "$chrom\t$previousStart\t$previousEnd"
                    set j 3
                    while {$j < $L_length} {
                        append n "\t$previousAnnotations($j)"
                        incr j
                    }
                    lappend L_newText "$n"
                } else {
                    lappend L_newText "$chrom\t$previousStart\t$previousEnd"
                }
                set previousStart $start
                set previousEnd $end
                set j 3
                while {$j < $L_length} {
                    set previousAnnotations($j) "$annotations($j)"
                    incr j
                }
            }
        }
        # Treatment of the last line(s)
        if {$UseAnn} {
            set n "$chrom\t$previousStart\t$previousEnd"
            set j 3
            while {$j < $L_length} {
                append n "\t$previousAnnotations($j)"
                incr j
            }
            lappend L_newText "$n"
        } else {
            lappend L_newText "$chrom\t$previousStart\t$previousEnd"
        }
    }
    
    ## Write the formatted bedfile
    if {$mergeOverlap} {
        WriteTextInFile [join $L_newText "\n"] $newBed
    } else {
        WriteTextInFile [join $L_Text($chrom) "\n"] $newBed
    }
    unset L_Text($chrom)
}
file delete -force $bedFile


return $newBed
}



# Check if a bed or VCF file is empty
proc isAnEmptyFile {bedOrVCFfile} {

# Return 1 if the extension is not .bed or .vcf
if {![regexp -nocase "\\.(bed|vcf(.gz)?)$" $bedOrVCFfile]} {return 1}

# After filtering lines beginning with "#", at least 1 line should be still present
if {[regexp -nocase ".gz$" $bedOrVCFfile]} {
    set f [open "|gzip -cd $bedOrVCFfile"]
} else {
    set f [open "$bedOrVCFfile"]
}
set test 0
while {![eof $f]} {
    set L [gets $f]
    if {$L eq ""} {continue}
    if {[regexp "^#" $L]} {continue}
    incr test
    break
}

if {$test} {return 0} else {return 1}
}


# Check the -samplesidBEDcol option (= number of the "samples_ID" column)
# - Should be > 3 (the 3 first columns are chrom, start, end)
# - Should be an existing column (<= total number of columns)
proc checksamplesidBEDcol {bedFile} {

global g_AnnotSV


if {$g_AnnotSV(samplesidBEDcol) ne -1} {
    
    # Look at the length of a line in the bed file
    set f [open $bedFile]
    while {![eof $f]} {
        set L [gets $f]
        if {$L eq ""} {continue}
        if {[regexp "^#" $L]} {continue}
        
        set thelength [llength [split $L "\t"]]
        break
    }
    close $f
    
    # Check the -samplesidBEDcol option, and set it to -1 if the column doesn't exist
    if {$g_AnnotSV(samplesidBEDcol) ne -1} {
        if {$g_AnnotSV(samplesidBEDcol) > $thelength} {
            puts "\nWARNING: -samplesidBEDcol = $g_AnnotSV(samplesidBEDcol)"
            puts "This value should correspond to a column of $bedFile ($thelength columns)"
            puts "-samplesidBEDcol is set to -1.\n"
            set g_AnnotSV(samplesidBEDcol) "-1"
        } elseif {$g_AnnotSV(samplesidBEDcol) < 4} {
            puts "\nWARNING: -samplesidBEDcol = $g_AnnotSV(samplesidBEDcol)"
            puts "This value should be > 3"
            puts "-samplesidBEDcol is set to -1.\n"
            set g_AnnotSV(samplesidBEDcol) "-1"
        }
    }
    
    # If g_AnnotSV(samplesidBEDcol) is still different to -1
    # -> formatting of the different values in the "Samples_ID" column
    if {$g_AnnotSV(samplesidBEDcol) ne -1} {
        
        incr g_AnnotSV(samplesidBEDcol) -1 ;# 0 is the first element of an informatic list: -1
        set g_AnnotSV(samplesidTSVcol) [expr {$g_AnnotSV(samplesidBEDcol)+2}]
        
        # This column should be a coma separated list of samplesid
        set L_toWrite {}
        set L_fromStart {}
        set f [open $bedFile]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            
            lappend L_fromStart $L
            if {[regexp "^#" $L]} {lappend L_toWrite $L; continue}
            
            set Ls [split $L "\t"]
            
            set part2 [lindex $Ls $g_AnnotSV(samplesidBEDcol)]
            set part2 [join [split $part2 " +| *\\\| *| *, *| *; *| */ *"] ","]
            
            lappend L_toWrite [join [lreplace $Ls $g_AnnotSV(samplesidBEDcol) $g_AnnotSV(samplesidBEDcol) $part2] "\t"]
        }
        close $f
        if {$L_toWrite ne $L_fromStart} {
            ReplaceTextInFile [join $L_toWrite "\n"] $bedFile
        }
    }
}

return
}


# Check the -svtBEDcol option (= number of the SVtype column)
# - Should be > 3 (the 3 first columns are chrom, start, end)
# - Should be an existing column (<= total number of columns)
proc checksvtBEDcol {bedFile} {

global g_AnnotSV


if {$g_AnnotSV(svtBEDcol) ne -1} {
    
    # Look at the length of a line in the bed file
    set f [open $bedFile]
    while {![eof $f]} {
        set L [gets $f]
        if {$L eq ""} {continue}
        if {[regexp "^#" $L]} {continue}
        set thelength [llength [split $L "\t"]]
        break
    }
    close $f
    
    # Check the -svtBEDcol option, is set to -1 if the column doesn't exist
    if {$g_AnnotSV(svtBEDcol) ne -1} {
        if {$g_AnnotSV(svtBEDcol) > $thelength} {
            puts "\nWARNING: -svtBEDcol = $g_AnnotSV(svtBEDcol)"
            puts "This value should correspond to a column of $bedFile ($thelength columns)"
            puts "-svtBEDcol is set to -1. NO SV RANKING WILL BE PERFORMED.\n"
            set g_AnnotSV(svtBEDcol) "-1"
            set g_AnnotSV(ranking) 0
        } elseif {$g_AnnotSV(svtBEDcol) < 4} {
            puts "\nWARNING: -svtBEDcol = $g_AnnotSV(svtBEDcol)"
            puts "This value should be > 3"
            puts "-svtBEDcol is set to -1. NO SV RANKING WILL BE PERFORMED.\n"
            set g_AnnotSV(svtBEDcol) "-1"
            set g_AnnotSV(ranking) 0
        } else {
            # 0 is the first element of an informatic list: -1
            # AND 2 columns (AnnotSV ID + SV length) are added: +2
            # Finally: +1
            incr g_AnnotSV(svtBEDcol) -1 ;# number of the "SV_type" column in the input BED file
            set g_AnnotSV(svtTSVcol) [expr {$g_AnnotSV(svtBEDcol) +2}] ;# number of the "SV_type" column in the output TSV file
        }
    }
}
return
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-genes.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the                                             #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


## - Check and create if necessary the "genes.RefSeq.sorted.bed" file
proc checkGenesRefSeqFile {} {
    
    global g_AnnotSV
    
    ## Check if the Genes file has been downloaded then formatted
    #############################################################
    set genesDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)"
    
    if {[regexp "GRCh37|GRCh38|mm39" $g_AnnotSV(genomeBuild)]} {
        set genesFileDownloaded [glob -nocomplain $genesDir/ncbiRefSeq.txt.gz]
    } elseif {[regexp "mm9|mm10" $g_AnnotSV(genomeBuild)]} {
        set genesFileDownloaded [glob -nocomplain $genesDir/refGene.txt.gz]
    } elseif {[regexp "CHM13" $g_AnnotSV(genomeBuild)]} {
        set genesFileDownloaded [glob -nocomplain $genesDir/hs1_curGene*.txt.gz]
    }
    
    set genesFileFormatted "[glob -nocomplain $genesDir/genes.RefSeq.sorted.bed]"
    set transcriptVersionFile "$genesDir/transcript_version.RefSeq.tsv"
    
    if {$genesFileDownloaded eq "" && $genesFileFormatted eq ""} {
        puts "############################################################################"
        puts "\"$genesDir/*.txt.gz\" file doesn't exist"
        puts "Please check your install - Exit with error."
        puts "############################################################################"
        exit 2
    }
    
    if {$genesFileFormatted eq ""} {
        
        ## Delete promoters files (need to be updated after the creation of new genes file)
        ###################################################################################
        set promoterDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/RegulatoryElements/$g_AnnotSV(genomeBuild)"
        foreach promFile [glob -nocomplain "$promoterDir/promoter_*bp_RefSeq_$g_AnnotSV(genomeBuild).sorted.bed"] {
            file delete -force $promFile
        }
        
        ## - Create the "genes.RefSeq.sorted.bed"
        #########################################
        set genesFileFormatted "$genesDir/genes.RefSeq.sorted.bed"
        puts "\t...creation of $genesFileFormatted ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        puts "\t   (done only once during the first annotation)"
        
        # Removing non-standard contigs (other than the standard 1-22,X,Y,MT) and sorting the file in karyotypic order
        # -> create L_genesTXTsorted
        
        ## Save the line of the genesTXT by chromosome (L_lines($chrom))
        foreach L [LinesFromGZFile $genesFileDownloaded] {
            set Ls [split $L "\t"]
            set chrom [lindex $Ls 2]
            lappend L_lines($chrom) "$L"
        }
        ## Sorting in karyotypic order
        set L_genesTXTsorted {}
        foreach val {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
            if {![info exists L_lines(chr$val)]} {continue}
            lappend L_genesTXTsorted {*}"[lsort -command AscendingSortOnElement4 [lsort -command AscendingSortOnElement5 $L_lines(chr$val)]]"
        }
        
        # Creation of the "$genesFileFormatted"
        #######################################
        file delete -force $transcriptVersionFile
        
        # Chromosome nomenclature used: 1-22,X,Y,M,T (without "chr")
        ## INPUT:    #bin name chrom strand txStart txEnd cdsStart cdsEnd exonCount exonStarts exonEnds score name2 cdsStartStat cdsEndStat exonFrames
        #            (cf https://genome.ucsc.edu/cgi-bin/hgTables?db=hg38&hgta_group=genes&hgta_track=refSeqComposite&hgta_table=ncbiRefSeqCurated&hgta_doSchema=describe+table+schema)
        ## OUTPUT:   chrom txStart txEnd strand name2 name cdsStart cdsEnd exonStarts exonEnds
        # WARNING : NR_* are for non coding RNA. However, cdsStart=cdsEnd, => CDSlength=1
        set L_TxVersionToWrite {}
        set L_formattedGenesToWrite {}
        foreach L $L_genesTXTsorted {
            set Ls [split $L "\t"]
            regsub "chr" [lindex $Ls 2] "" chrom
            if {![regexp "(\[^.\]+)\\.(\[0-9_\]+)$" [lindex $Ls 1] match transcript_ID transcript_version]} {
                set transcript_ID [lindex $Ls 1]
                set transcript_version ""
            }
            lappend L_TxVersionToWrite "$transcript_ID\t$transcript_version"
            set line "$chrom\t[lindex $Ls 4]\t[lindex $Ls 5]\t[lindex $Ls 3]\t[lindex $Ls 12]\t$transcript_ID\t[lindex $Ls 6]\t[lindex $Ls 7]\t[lindex $Ls 9]\t[lindex $Ls 10]"
            if {![info exists infos($line)]} {
                lappend L_formattedGenesToWrite $line
                set infos($line) 1
            }
        }
        file delete -force $genesFileDownloaded
        WriteTextInFile [join $L_formattedGenesToWrite "\n"] $genesFileFormatted.tmp
        WriteTextInFile [join $L_TxVersionToWrite "\n"] $transcriptVersionFile
        
        # Sorting of the bedfile:
        # Intersection with very large files can cause trouble with excessive memory usage.
        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n $genesFileFormatted.tmp > $genesFileFormatted" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkGenesRefSeqFile --"
            puts "sort -k1,1 -k2,2n $genesFileFormatted.tmp > $genesFileFormatted"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $sortTmpFile
        file delete -force $genesFileFormatted.tmp
        
    }
    
    # DISPLAY:
    ##########
    set g_AnnotSV(genesFile) $genesFileFormatted
    
}



## - Check the "genes.ENSEMBL.sorted.bed" file
proc checkGenesENSEMBLfile {} {
    
    global g_AnnotSV
    
    ## Check if the formatted ENSEMBL genes file is present
    #######################################################
    set genesDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)"
    
    set TmpGenesENSEMBLfileFormatted "$genesDir/genes.ENSEMBL.sorted.tmp.bed"
    # Header of "genes.ENSEMBL.sorted.tmp.bed" (after the awk command, cf in the README):
    # 1       11868   14409   +       DDX11L2 ENST00000456328.2       14409   14409   11868,12612,13220,      12227,12721,14409,
    set GenesENSEMBLfileFormatted "$genesDir/genes.ENSEMBL.sorted.bed"
    # Header of "refGene.sorted.bed" (after this proc):
    # 1       11868   14409   +       DDX11L2 ENST00000456328       14409   14409   11868,12612,13220,      12227,12721,14409,
    
    set transcriptVersionFile "$genesDir/transcript_version.ENSEMBL.tsv"
    
    
    if {![file exists $GenesENSEMBLfileFormatted] && ![file exists $TmpGenesENSEMBLfileFormatted]} {
        puts "############################################################################"
        puts "\"$GenesENSEMBLfileFormatted\" doesn't exist"
        puts "Please check your install - Exit with error."
        puts "############################################################################"
        exit 2
    }
    
    if {[file exists $TmpGenesENSEMBLfileFormatted] && ![file exists $GenesENSEMBLfileFormatted]} {
        ## - Create the "genes.ENSEMBL.sorted.bed" and "transcript_version.ENSEMBL.tsv"
        ###############################################################################
        puts "\t...creation of $GenesENSEMBLfileFormatted ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        puts "\t   (done only once during the first annotation)"
        
        # WARNING: "transcript_version.ENSEMBL.tsv" is empty for the GRCh37 build
        
        set L_TxVersionToWrite {}
        set L_toWrite {}
        foreach L [LinesFromFile $TmpGenesENSEMBLfileFormatted] {
            set Ls [split $L "\t"]
            if {![regexp "(\[^.\]+)\\.(\[0-9_\]+)$" [lindex $Ls 5] match transcript_ID transcript_version]} {
                set transcript_ID [lindex $Ls 5]
                set transcript_version ""
            }
            lappend L_TxVersionToWrite "$transcript_ID\t$transcript_version"
            lappend L_toWrite "[join [lrange $Ls 0 4] "\t"]\t$transcript_ID\t[join [lrange $Ls 6 end] "\t"]"
        }
        WriteTextInFile [join $L_TxVersionToWrite "\n"] $transcriptVersionFile
        WriteTextInFile [join $L_toWrite "\n"] $GenesENSEMBLfileFormatted
        
        file delete -force $TmpGenesENSEMBLfileFormatted
    }
    
    # DISPLAY:
    ##########
    set g_AnnotSV(genesFile) $GenesENSEMBLfileFormatted
}




proc transcriptVersionAnnotation {transcript_ID} {
    
    global g_AnnotSV
    global g_transcriptVersion
    
    if {$g_AnnotSV(organism) ne "Human"} {set g_transcriptVersion(Done) 1}
    
    if {![info exists g_transcriptVersion(Done)]} {
        set g_transcriptVersion(Done) 1
        set genesDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)"
        set transcriptVersionFile "$genesDir/transcript_version.$g_AnnotSV(tx).tsv"
        
        if {![file exists $transcriptVersionFile]} {
            puts "############################################################################"
            puts "\"$transcriptVersionFile\" doesn't exist"
            puts "Please check your install - Exit with error."
            puts "############################################################################"
            exit 2
        }
        
        foreach L [LinesFromFile $transcriptVersionFile] {
            set Ls [split $L "\t"]
            set g_transcriptVersion([lindex $Ls 0]) [lindex $Ls 1]
        }
    }
    
    if {[info exists g_transcriptVersion($transcript_ID)]} {
        return $g_transcriptVersion($transcript_ID)
    } else {
        return ""
    }
}



## Annotate the SV bedFile with the genes file.
## Keep only 1 transcript annotation by gene:
##   - the one selected by the user with the "-txFile" option
##   - the one with the most of "bp from CDS" (=overlappedCDSlength)
##   - if x transcript with same "bp from CDS", the one with the most of "bp from UTR, exon, intron" (=overlappedTxLength)
##
## Creation of FullAndSplitBedFile ($g_AnnotSV(outputDir)/$g_AnnotSV(outputFile).tmp)
## -> formatted and sorted
proc genesAnnotation {} {
    
    global g_AnnotSV
    global g_Lgenes
    
    
    # Check the -svtBEDcol and -samplesidBEDcol options
    # Create the -svtTSVcol variable
    #####################################################################################
    checksvtBEDcol $g_AnnotSV(bedFile)
    checksamplesidBEDcol $g_AnnotSV(bedFile)
    
    # Bedfile should be sorted and should not have "chr" in the first column
    ########################################################################
    # Removing non-standard contigs (other than the standard 1-22,X,Y,MT) and sorting the file in karyotypic order
    set f [open $g_AnnotSV(bedFile)]
    set test 0
    while {![eof $f]} {
        set L [gets $f]
        if {$L eq ""} {continue}
        
        # To avoid a bug with "bedtools intersect", the last value of a line could NOT be empty.
        # Exemple of bedtools error message:
        # "Error: line number 716 of file input.formatted.sorted.bed has 6 fields, but 4 were expected."
        regsub "\t$" $L "\t." L
        
        # To avoid a bug, the SV type value should be trimmed (should not be equal to "DEL ")
        # For each tab separated value, any leading or trailing white space is removed
        set Ls [split $L "\t"]
        set newLs ""
        foreach val $Ls {
            lappend newLs [string trim $val]
        }
        set L [join $newLs "\t"]
        
        if {[regsub "chr" [lindex $L 0] "" chrom] ne 0} {
            lappend L_Text($chrom) "[string range $L 3 end]"
        } else {
            lappend L_Text($chrom) "$L"
        }
    }
    close $f
    ## Writing the bedfile (not sorted)
    set emptyBed 1
    regsub -nocase ".bed$" $g_AnnotSV(bedFile) ".formatted.sorted.bed" newBed
    set newBed "$g_AnnotSV(outputDir)/[file tail $newBed]"
    file delete -force $newBed
    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
        if {![info exists L_Text($chrom)]} {continue}
        set emptyBed 0
        WriteTextInFile [join $L_Text($chrom) "\n"] $newBed.tmp
        unset L_Text($chrom)
    }
    if {$emptyBed} {
        puts "The SV input file is empty or badly formatted."
        puts "Exit with error\n"
        exit 2
    }
    
    # Sorting of the bedfile:
    # Intersection with very large files can cause trouble with excessive memory usage.
    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
    set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
    ReplaceTextInFile "#!/bin/bash" $sortTmpFile
    WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
    WriteTextInFile "export LC_ALL=C" $sortTmpFile
    WriteTextInFile "sort -k1,1 -k2,2n $newBed.tmp >> $newBed" $sortTmpFile
    file attributes $sortTmpFile -permissions 0755
    if {[catch {eval exec bash $sortTmpFile} Message]} {
        puts "-- genesAnnotation --"
        puts "sort -k1,1 -k2,2n $newBed.tmp >> $newBed"
        puts "$Message"
        puts "Exit with error\n"
        exit 2
    }
    file delete -force $sortTmpFile
    file delete -force $newBed.tmp
    set g_AnnotSV(bedFile) $newBed
    
    # Used for the insertion of the "full/split" information
    set L_Bed [LinesFromFile $newBed]
    
    # OUTPUT:
    ###############
    set FullAndSplitBedFile "$g_AnnotSV(outputDir)/$g_AnnotSV(outputFile).tmp" ;# DON'T REMOVE IT! Used in AnnotSV-write.tcl
    set splitBedFile "$FullAndSplitBedFile.tmp"
    file delete -force $FullAndSplitBedFile
    file delete -force $splitBedFile
    
    
    # Intersect of the input SV bedfile with the genes annotations
    # + create the "FullAndSplitBedFile"
    ###################################################################################################
    
    set L_linesToWrite {}
    set i_toWrite 0
    ## -> Creation of the split annotations
    if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $g_AnnotSV(genesFile) -wa -wb > $splitBedFile} Message]} {
        if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(bedFile) -b $g_AnnotSV(genesFile) -wa -wb > $splitBedFile} Message]} {
            puts "-- genesAnnotation --"
            puts "$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $g_AnnotSV(genesFile) -wa -wb > $splitBedFile"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
    }
    if {[file size $splitBedFile] eq 0} {
        puts "...no intersection between SV and gene annotation"
        set n 0
        while {$n < [llength $L_Bed]} {
            lappend L_linesToWrite "[lindex $L_Bed $n]\tfull"
            incr i_toWrite
            incr n
        }
        WriteTextInFile [join $L_linesToWrite "\n"] "$FullAndSplitBedFile"
        
        ## Delete temporary file
        file delete -force $splitBedFile
        return
    }
    
    # List of the user selected transcripts
    #######################################
    set L_selectedTx {}
    if {$g_AnnotSV(txFile) ne ""} {
        foreach L [LinesFromFile $g_AnnotSV(txFile)] {
            foreach tx [split $L " |\t"] {
                # Remove the version number if present
                regsub "\\.\[0-9\]+" $tx "" tx
                lappend L_selectedTx $tx
            }
        }
    }
    
    # Parse the "splitBedFile"
    ##########################
    set L_allGenesOverlapped {}
    set L_genes {}
    set L "[FirstLineFromFile $splitBedFile]"
    set Ls [split $L "\t"]
    set splitSVleft [lindex $Ls 1]
    set splitSVright [lindex $Ls 2]
    
    # oldsplitSV (a complete line from the bedfile)
    # Compulsory: In case of same SV presents several times in the bed file (but with different user annotation), a complete line should be kept
    if {$g_AnnotSV(svtBEDcol) ne "-1"} {
        set SVtype "\t[lindex $Ls "$g_AnnotSV(svtBEDcol)"]"
    } else {
        set SVtype ""
    }
    set shortOldSplitSV "[join [lrange $Ls 0 2] "\t"]"; # chrom, start, end
    set oldSplitSV "[join [lrange $Ls 0 end-10] "\t"]"
    
    # SVfromBED (a complete line from the bedfile)
    set n 0
    set Ls_fromBED "[split [lindex $L_Bed $n] "\t"]"
    if {$g_AnnotSV(svtBEDcol) ne "-1"} {
        set SVtypeFromBED "\t[lindex $Ls_fromBED "$g_AnnotSV(svtBEDcol)"]"
    } else {
        set SVtypeFromBED ""
    }
    set SVfromBED "[join $Ls_fromBED "\t"]"
    
    # Particular case: only 1 SV is associated with split lines AND it is not the first SV of the BED.
    while {$SVfromBED ne $oldSplitSV} {
        # Writing of the "full" SV line (not present in the $splitBedFile file, if not covering a gene)
        lappend L_linesToWrite "[lindex $L_Bed $n]\tfull"
        incr i_toWrite
        incr n
        set Ls_fromBED "[split [lindex $L_Bed $n] "\t"]"
        if {$g_AnnotSV(svtBEDcol) ne "-1"} {
            set SVtypeFromBED "\t[lindex $Ls_fromBED "$g_AnnotSV(svtBEDcol)"]"
        } else {
            set SVtypeFromBED ""
        }
        set SVfromBED "[join $Ls_fromBED "\t"]"
    }
    
    # We have several annotations for 1 SV: 1 by gene.
    #
    # Keep only 1 transcript by gene:
    #   - the one selected by the user with the "-txFile" option
    #   - the one with the most of "bp" of overlapped CDS (=overlappedCDSlength)
    #   - if x transcript with same "bp of overlapped CDS", the one with the most of "bp" of overlapped transcript (=overlapped "UTR, exon, intron" = overlappedTxLength)
    set f [open $splitBedFile]
    while {![eof $f]} {
        set L [gets $f]
        if {$L eq ""} {continue}
        set Ls [split $L "\t"]
        
        # splitSV (all the line from the bedfile)
        if {$g_AnnotSV(svtBEDcol) ne "-1"} {
            set SVtype "\t[lindex $Ls "$g_AnnotSV(svtBEDcol)"]"
        } else {
            set SVtype ""
        }
        set splitSV "[join [lrange $Ls 0 end-10] "\t"]"
        
        if {$splitSV ne $oldSplitSV} {;# new annotated SV line (all the split lines are done for the oldSV) => we write all information about the oldSV
            while {$SVfromBED ne $splitSV} {
                # Writing of the "full" SV line (not present in the $splitBedFile file, if not covering a gene)
                lappend L_linesToWrite "[lindex $L_Bed $n]\tfull"
                incr i_toWrite
                if {$i_toWrite > 10000} {
                    WriteTextInFile [join $L_linesToWrite "\n"] "$FullAndSplitBedFile"
                    set L_linesToWrite {}
                    set i_toWrite 0
                }
                # Writing of 1 "split" line...
                if {$SVfromBED eq $oldSplitSV} {
                    # We remove the redundancy and we keep the coordinate sorting
                    set L_genes [RemoveRedundancyWithoutSorting $L_genes]
                    
                    set g_Lgenes($shortOldSplitSV) [join $L_genes ";"]
                    # ...for each gene overlapped by the SV
                    foreach gene $L_genes {
                        set bestCDSlov -1
                        set bestCDSlcompl -1
                        set bestTxL -1
                        set bestAnn ""
                        foreach CDSlov $L_overlappedCDSlength($gene) CDSlcompl $L_completeCDSlength($gene) txL $L_overlappedTxLength($gene) ann $L_annot($gene)  {
                            if {$CDSlov > $bestCDSlov} {
                                set bestAnn $ann; set bestCDSlov $CDSlov; set bestCDSlcompl $CDSlcompl; set bestTxL $txL; continue
                            }
                            if {$CDSlov eq $bestCDSlov} {
                                if {$txL > $bestTxL} {
                                    set bestAnn $ann; set bestCDSlov $CDSlov; set bestCDSlcompl $CDSlcompl; set bestTxL $txL; continue
                                }
                            }
                        }
                        if {$bestCDSlcompl eq 0} {
                            set percentCDS 0
                        } else {
                            set percentCDS [expr {$bestCDSlov*100/$bestCDSlcompl}]
                        }
                        lappend L_linesToWrite "$bestAnn\t$bestCDSlov\t$percentCDS\t$bestTxL\tsplit"
                        incr i_toWrite
                    }
                    set splitSVleft [lindex $Ls 1]
                    set splitSVright [lindex $Ls 2]
                    unset L_annot
                    unset L_overlappedTxLength
                    unset L_overlappedCDSlength
                    unset L_completeCDSlength
                    # check the catch
                    catch {unset Finish}
                    set L_genes {}
                    set oldSplitSV "$splitSV"
                    regexp "^\[^\t\]+\t\[^\t\]+\t\[^\t\]+" $oldSplitSV shortOldSplitSV
                }
                incr n
                set Ls_fromBED "[split [lindex $L_Bed $n] "\t"]"
                if {$g_AnnotSV(svtBEDcol) ne "-1"} {
                    set SVtypeFromBED "\t[lindex $Ls_fromBED "$g_AnnotSV(svtBEDcol)"]"
                } else {
                    set SVtypeFromBED ""
                }
                set SVfromBED "[join $Ls_fromBED "\t"]"
            }
        }
        set txName [lindex $Ls end-4]
        set gene [lindex $Ls end-5]
        lappend L_allGenesOverlapped $gene
        
        # Look if the annotation line of a user selected transcript has already been registered for this gene
        # If yes, no need to recalculate the txStart, txEnd, CDSstart...
        if {[info exists Finish($gene)]} {continue}
        
        # No preferred transcript annotation registered at this step, continue the selection with the CDS/Tx lengths
        lappend L_genes $gene
        lappend L_annot($gene) "$L"
        
        set txStart [lindex $Ls end-8]
        set txEnd [lindex $Ls end-7]
        set CDSstart [lindex $Ls end-3]
        set CDSend [lindex $Ls end-2]
        set exonStarts [lindex $Ls end-1]
        set exonEnds [lindex $Ls end]
        
        # Calcul of overlappedTxLength:
        if {$txStart > $splitSVleft} {set splitSV_start $txStart} else {set splitSV_start $splitSVleft}
        if {$txEnd < $splitSVright} {set splitSV_end $txEnd} else {set splitSV_end $splitSVright}
        set overlappedTxLength [expr {$splitSV_end-$splitSV_start}]
        lappend L_overlappedTxLength($gene) "$overlappedTxLength"
        
        # Calcul of completeCDSlength:
        set completeCDSlength 0
        foreach A [split $exonStarts ","] B [split $exonEnds ","] {
            if {$A eq "" || $B eq ""} {continue}
            #set txEnd $B
            # Remove exon(s) not in the CDS:
            if {$A<$CDSstart} {
                if {$B<$CDSstart} {continue}
                incr completeCDSlength [expr {$B-$CDSstart}]
                continue
            }
            if {$B>$CDSend} {
                if {$A>$CDSend} {continue}
                incr completeCDSlength [expr {$CDSend-$A}]
                continue
            }
            incr completeCDSlength [expr {$B-$A}]
        }
        lappend L_completeCDSlength($gene) "$completeCDSlength"
        
        # Calcul of overlappedCDSlength:
        set overlappedCDSlength 0
        foreach A [split $exonStarts ","] B [split $exonEnds ","] {
            if {$A eq "" || $B eq ""} {continue}
            # Remove exon(s) not in the CDS:
            if {$A<$CDSstart} {
                if {$B<$CDSstart} {continue}
                set A $CDSstart
            }
            if {$B>$CDSend} {
                if {$A>$CDSend} {continue}
                set B $CDSend
            }
            # Intersect coding exon(s) with the SV:
            if {$splitSV_start<$A} {
                if {$splitSV_end<$A} {break}
                set i $A
            } else {set i $splitSV_start}
            if {$splitSV_start>$B} {continue}
            if {$splitSV_end<$B} {set j $splitSV_end} else {set j $B}
            incr overlappedCDSlength [expr {$j-$i}]
        }
        lappend L_overlappedCDSlength($gene) "$overlappedCDSlength"
        
        # Do we have a user selected transcript?
        if {"$txName" ne "" && [lsearch -exact $L_selectedTx "$txName"] ne -1} {
            set L_annot($gene) {}
            lappend L_annot($gene) "$L"
            set L_overlappedTxLength($gene) "$overlappedTxLength"
            set L_overlappedCDSlength($gene) "$overlappedCDSlength"
            set L_completeCDSlength($gene) "$completeCDSlength"
            set Finish($gene) 1
        }
        
    }
    close $f
    
    # Treatment for the last SV of the file
    ########################################
    
    # Writing of the "full" SV line (not present in the $splitBedFile file, if not covering a gene)
    # Insertion of the "full length" SV line
    lappend L_linesToWrite "[lindex $L_Bed $n]\tfull"
    incr i_toWrite
    incr n
    
    # Treatment of the "split by gene" SV line
    # We remove the redundancy and we keep the coordinate sorting
    set L_genes_coordSorted_uniq {}
    foreach gtmp $L_genes {
        if {[lsearch -exact $L_genes_coordSorted_uniq "$gtmp"] eq -1} {
            lappend L_genes_coordSorted_uniq $gtmp
        }
    }
    set L_genes $L_genes_coordSorted_uniq
    set g_Lgenes($shortOldSplitSV) [join $L_genes ";"]
    foreach gene $L_genes {
        set bestCDSlov -1
        set bestCDSlcompl -1
        set bestTxL -1
        set bestAnn ""
        foreach CDSlov $L_overlappedCDSlength($gene) CDSlcompl $L_completeCDSlength($gene) txL $L_overlappedTxLength($gene) ann $L_annot($gene)  {
            if {$CDSlov > $bestCDSlov} {
                set bestAnn $ann; set bestCDSlov $CDSlov; set bestCDSlcompl $CDSlcompl; set bestTxL $txL; continue
            }
            if {$CDSlov eq $bestCDSlov} {
                if {$txL > $bestTxL} {
                    set bestAnn $ann; set bestCDSlov $CDSlov; set bestCDSlcompl $CDSlcompl; set bestTxL $txL; continue
                }
            }
        }
        if {$bestCDSlcompl eq 0} {
            set percentCDS 0
        } else {
            set percentCDS [expr {$bestCDSlov*100/$bestCDSlcompl}]
        }
        lappend L_linesToWrite "$bestAnn\t$bestCDSlov\t$percentCDS\t$bestTxL\tsplit"
        incr i_toWrite
    }
    
    # Insertion of the last "full length" SV lines
    while {$n < [llength $L_Bed]} {
        lappend L_linesToWrite "[lindex $L_Bed $n]\tfull"
        incr i_toWrite
        incr n
    }
    
    ## Writing
    WriteTextInFile [join $L_linesToWrite "\n"] "$FullAndSplitBedFile"
    
    ## Delete temporary file
    file delete -force $splitBedFile
    
    
    ## Annotate the SV bedFile with the regulatory elements files
    ## (Preparation of the phenotype-driven analysis (Exomiser) will be done there)
    set L_allGenesOverlapped [lsort -unique $L_allGenesOverlapped]
    regulatoryElementsAnnotation $L_allGenesOverlapped
    
    ## Memo:
    #
    #  The same SV can be annotated on several genes. Warning: annotations are not necessarily group by gene. Example:
    ##################################################################################################################
    #     1       144676654       144680028       DEL     SGT161364       NBPF8   NR_102405       0       3375    intron5-intron5 144676654       144680028
    #     1       144676654       144680028       DEL     SGT161364       NBPF9   NM_001277444    0       3375    intron8-intron8 144676654       144680028
    #     1       144676654       144680028       DEL     SGT161364       NBPF8   NR_102404       0       3375    intron6-intron6 144676654       144680028
    #
    # It's due to the alternance of NBPF8 and NBPF9 in the genes file:
    ##################################################################
    #     1       144614958       144830407       NBPF8   NR_102405       144830407       144830407       144614958,144618081,144619346,144619882,144621446,144813741,144814679,144815935,144816472,144817965,144823127,144823812,144824704,144825352,144826234,144826932,144827819,144828540,    144615303,144618296,144619419,144620094,144621656,144813844,144814894,144816008,144816678,144818017,144823179,144823985,144824756,144825525,144826286,144827105,144827928,144830407,
    #     1       144614958       145370304       NBPF9   NM_001277444    144615130       145368684       144614958,144615095,144615246,144617149,144618081,144619346,144619882,144621446,144813741,144814679,144815935,144816472,144817965,144821920,144823127,144823812,144824704,144825352,144826234,144826932,144827819,145313333,145314215,145314903,145315790,145368440,    144614998,144615246,144615303,144617252,144618296,144619419,144620094,144621656,144813844,144814894,144816008,144816678,144818017,144822084,144823179,144823985,144824756,144825525,144826286,144827105,144827928,145313506,145314267,145315076,145315899,145370304,
    #     1       144614958       144830407       NBPF8   NR_102404       144830407       144830407       144614958,144617149,144618081,144619346,144619882,144621446,144813741,144814679,144815935,144816472,144817965,144823127,144823812,144824704,144825352,144826234,144826932,144827819,144828540,  144615303,144617252,144618296,144619419,144620094,144621656,144813844,144814894,144816008,144816678,144818017,144823179,144823985,144824756,144825525,144826286,144827105,144827928,144830407,
    
    return
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-haploinsufficiency.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################



## - Check if the following HI file has been downloaded:
#    - HI_Predictions_Version3.bed.gz
#
## - Check and create if necessary the following file:
#    - 'date'_HI.tsv.gz
proc checkHIfile {} {
    
    global g_AnnotSV
    
    ## Check if the HI file has been downloaded then formatted
    #########################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based"
    
    set HIfileDownloaded [glob -nocomplain "$extannDir/DDD/HI_Predictions_Version3.bed.gz"]
    set HIfileFormattedGzip [glob -nocomplain "$extannDir/DDD/*_HI.tsv.gz"]
    
    if {$HIfileDownloaded eq "" && $HIfileFormattedGzip eq ""} {
        # No "Haploinsufficiency" annotation
        return
    }
    
    if {[llength $HIfileFormattedGzip]>1} {
        puts "Several Haploinsufficiency files exist:"
        puts "$HIfileFormattedGzip"
        puts "Keep only one: [lindex $HIfileFormattedGzip end]\n"
        foreach hi [lrange $HIfileFormattedGzip 0 end-1] {
            file rename -force $hi $hi.notused
        }
        return
    }
    
    if {$HIfileFormattedGzip eq ""} {
        ## Create : 'date'_HI.tsv
        
        set HIfileFormatted "$extannDir/DDD/[clock format [clock seconds] -format "%Y%m%d"]_HI.tsv"
        
        puts "\t...HI configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        puts "\t\t...creation of $HIfileFormatted.gz"
        puts "\t\t   (done only once during the first HI annotation)"
        
        set TexteToWrite {genes\tDDD_HI_percent}
        foreach L [LinesFromGZFile $HIfileDownloaded] {
            if {[regexp  "^track name" $L]} {continue}
            set Ls [split $L "\t"]
            
            # Line example:
            # chrX    37850070        37850569        HYPM|0.000043663|100%   0.000043663     .       37850070        37850569        0,255,0
            set infos [split [lindex $Ls 3] "|"]
            set gene [lindex $infos 0]
            regsub "%" [lindex $infos end] "" percent
            lappend TexteToWrite "$gene\t$percent"
        }
        
        # Write outputfile
        WriteTextInFile [join $TexteToWrite "\n"] $HIfileFormatted
        if {[catch {exec gzip $HIfileFormatted} Message]} {
            puts "-- checkHIfile --"
            puts "gzip $HIfileFormatted"
            puts "$Message\n"
        }
        
        file delete -force $HIfileDownloaded
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-help.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################

proc showHelp {} {
    
    global g_AnnotSV
    
    if {[file exists $g_AnnotSV(installDir)/commandLineOptions.txt]} {
        puts [ContentFromFile $g_AnnotSV(installDir)/commandLineOptions.txt]
    } elseif {[file exists $g_AnnotSV(docDir)/commandLineOptions.txt]} {
        puts [ContentFromFile $g_AnnotSV(docDir)/commandLineOptions.txt]
    }
    
    return
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-loeuf-pLI.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


# - Check if the gnomAD (LOEUF) file has been downloaded:
#   "gnomad.v2.1.1.lof_metrics.by_gene.txt"
#
# - Check and create if necessary the following file:
#   'date'_gnomAD.LOEUF.pLI.annotations.tsv
proc checkLOEUFfile {} {
    
    global g_AnnotSV
    
    ## Check if the LOEUF file has been downloaded then formatted
    #############################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based"
    
    set LOEUFfileDownloaded [glob -nocomplain "$extannDir/gnomAD/gnomad.*.lof_metrics.by_gene.txt"]
    set LOEUFformattedFile  [glob -nocomplain "$extannDir/gnomAD/*_gnomAD.LOEUF.pLI.annotations.tsv.gz"]
    
    if {$LOEUFfileDownloaded eq "" && $LOEUFformattedFile eq ""} {
        # No "LOEUF" annotation
        return
    }
    
    if {[llength $LOEUFformattedFile]>1} {
        puts "Several LOEUF files exist:"
        puts "$LOEUFformattedFile"
        puts "Keep only one: [lindex $LOEUFformattedFile end]\n"
        foreach lf [lrange $LOEUFformattedFile 0 end-1] {
            file rename -force $lf $lf.notused
        }
        return
    }
    
    if {$LOEUFformattedFile eq ""} {
        ## Create : 'date'_gnomAD.LOEUF.pLI.annotations.tsv.gz   ; # Header: genes  LOEUF_bin
        set LOEUFformattedFile "$extannDir/gnomAD/[clock format [clock seconds] -format "%Y%m%d"]_gnomAD.LOEUF.pLI.annotations.tsv"
        
        puts "\t...creation of $LOEUFformattedFile.gz ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        puts "\t   (done only once during the first LOEUF annotation)"
        
        ReplaceTextInFile "genes\tLOEUF_bin\tpLI_gnomAD\tpLI_ExAC" $LOEUFformattedFile
        foreach L [LinesFromFile $LOEUFfileDownloaded] {
            set Ls [split $L "\t"]
            if {[regexp  "^gene" $L]} {
                set i_gene    0
                set i_loeuf   [lsearch -regexp $Ls "^oe_lof_upper_bin"]; if {$i_loeuf == -1} {puts "Bad syntax into $LOEUFfileDownloaded.\noe_lof_upper_bin field not found - Exit with error"; exit 2}
                set i_pLI     [lsearch -regexp $Ls "^pLI"];              if {$i_pLI == -1}   {puts "Bad syntax into $LOEUFfileDownloaded.\npLI field not found - Exit with error"; exit 2}
                set i_pLIexac [lsearch -regexp $Ls "^exac_pLI"];         if {$i_pLIexac == -1} {puts "Bad syntax into $LOEUFfileDownloaded.\nexac_pLI field not found - Exit with error"; exit 2}
                continue
            }
            set gene    [lindex $Ls $i_gene]
            set loeuf   [lindex $Ls $i_loeuf]
            set pLI     [lindex $Ls $i_pLI]
            set pLIexac [lindex $Ls $i_pLIexac]
            if {$loeuf != "NA"}   {lappend L_loeuf($gene) "$loeuf"}     ;# Low LOEUF scores (e.g. 0 from values [0-9]) suggest a higher intolerance to inactivation
            if {$pLI != "NA"}     {lappend L_pLI($gene) "$pLI"}         ;# High pLI scores (e.g. 1 from values [0-1]) suggest a higher intolerance to inactivation
            if {$pLIexac != "NA"} {lappend L_pLIexac($gene) "$pLIexac"} ;# High pLIexac scores (e.g. 0) suggest a higher intolerance to inactivation
        }
        
        set TexteToWrite ""
        set allGenes [array names L_loeuf]
        lappend allGenes {*}[array names L_pLI]
        lappend allGenes {*}[array names L_pLIexac]
        set allGenes [lsort -unique $allGenes]
        foreach g $allGenes {
            if {![info exists L_loeuf($g)]} {set loeuf ""} else {set loeuf [lindex [lsort $L_loeuf($g)] 0]}
            if {![info exists L_pLI($g)]} {set pLI ""} else {set pLI [lindex [lsort $L_pLI($g)] 0]}
            if {![info exists L_pLIexac($g)]} {set pLIexac ""} else {set pLIexac [lindex [lsort $L_pLIexac($g)] 0]}
            
            lappend TexteToWrite "$g\t$loeuf\t$pLI\t$pLIexac"
        }
        WriteTextInFile [join $TexteToWrite "\n"] $LOEUFformattedFile
        if {[catch {exec gzip $LOEUFformattedFile} Message]} {
            puts "-- checkLOEUFfile --"
            puts "gzip $LOEUFformattedFile"
            puts "$Message\n"
        }
        
        file delete -force $LOEUFfileDownloaded
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-ncbi.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################

proc checkNCBIandHGNC {} {
    
    global g_AnnotSV
    
    # Check the existence of the "$NCBIandHGNCgeneDir/results.txt" file (for Human annotations)
    # HGNC ID   Approved symbol                   Previous symbols        Alias symbols   NCBI Gene ID
    # HGNC:5               A1BG                                                                      1
    # HGNC:37133       A1BG-AS1        NCRNA00181, A1BGAS, A1BG-AS             FLJ23569         503538
    # HGNC:24086           A1CF  ACF, ASP, ACF64, ACF65, APOBEC1CF                               29974
    # HGNC:6              A1S9T
    
    set NCBIandHGNCgeneDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/NCBIandHGNCgeneID"
    if {![regexp "Human" $g_AnnotSV(organism)]} {
        ## Checked the organism: should be "Human"
        set g_AnnotSV(hpo) "" ;# used for exomiser
    } elseif {![file exists "$NCBIandHGNCgeneDir/results.txt"]} {
        ## Checked if the "results.txt" file exists
        puts "\nWARNING: No Exomiser annotations available."
        puts "...$NCBIandHGNCgeneDir/results.txt doesn't exist"
        set g_AnnotSV(hpo) "" ;# used for exomiser
    } elseif {![file exists "$NCBIandHGNCgeneDir/geneSymbol_NCBIandHGNCgeneID.tsv"]} {
        # Checked if the "geneSymbol_NCBIandHGNCgeneID.tsv" file exists
        set L_TextToWrite {"genes\tNCBI_gene_ID\tHGNC_gene_ID"}
        foreach L [LinesFromFile "$NCBIandHGNCgeneDir/results.txt"] {
            set Ls [split $L "\t"]
            
            set NCBIgeneID [lindex $Ls 4]
            if {$NCBIgeneID eq "" || [regexp -nocase "NCBI Gene ID" $NCBIgeneID]} {continue}
            
            set HGNCgeneID [lindex $Ls 0]
            
            set ApprovedSymbol [lindex $Ls 1]
            if {$ApprovedSymbol ne "" && ![info exist tmp($ApprovedSymbol)]} {set tmp($ApprovedSymbol) 1; lappend L_TextToWrite "$ApprovedSymbol\t$NCBIgeneID\t$HGNCgeneID"}
            
            regsub -all " " [lindex $Ls 2] "" PreviousSymbol
            foreach ps [split $PreviousSymbol ","] {
                if {$ps ne "" && ![info exist tmp($ps)]} {set tmp($ps) 1; lappend L_TextToWrite "$ps\t$NCBIgeneID\t$HGNCgeneID"}
            }
            
            regsub -all " " [lindex $Ls 3] "" AliasSymbol
            foreach as [split $PreviousSymbol ","] {
                if {$as ne "" && ![info exist tmp($as)]} {set tmp($as) 1; lappend L_TextToWrite "$as\t$NCBIgeneID\t$HGNCgeneID"}
            }
        }
        WriteTextInFile [join $L_TextToWrite "\n"] "$NCBIandHGNCgeneDir/geneSymbol_NCBIandHGNCgeneID.tsv"
    }
    
    return
}


proc searchforNCBIGeneID {geneName} {
    
    global g_AnnotSV
    global geneID
    
    if {![array exists geneID]} {
        
        set NCBIandHGNCgeneDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/NCBIandHGNCgeneID"
        # Header:
        # HGNC ID   Approved symbol                   Previous symbols        Alias symbols   NCBI Gene ID
        # HGNC:5               A1BG                                                                      1
        # HGNC:37133       A1BG-AS1        NCRNA00181, A1BGAS, A1BG-AS             FLJ23569         503538
        # HGNC:24086           A1CF  ACF, ASP, ACF64, ACF65, APOBEC1CF                               29974
        # HGNC:6              A1S9T
        foreach L [LinesFromFile "$NCBIandHGNCgeneDir/results.txt"] {
            set Ls [split $L "\t"]
            if {[regexp "Approved symbol" $L]} {
                set i_approuved [lsearch -exact $Ls "Approved symbol"]
                set i_ncbi [lsearch -exact $Ls "NCBI Gene ID"]
                set i_previous [lsearch -exact $Ls "Previous symbol"]
                set i_alias [lsearch -exact $Ls "Alias symbol"]
                continue
            }
            set Approved_symbol [lindex $Ls $i_approuved]
            set NCBI_gene_ID [lindex $Ls $i_ncbi]
            if {[regexp "\\\[" $NCBI_gene_ID]} { ;# some lines have bad "NCBI_gene_ID" : "CYP4F30P   4F-se9[6:7:8]   C2orf14   100132708"
                continue
            }
            set Previous_symbol [lindex $Ls $i_previous]
            set Alias_symbol [lindex $Ls $i_alias]
            
            set geneID($Approved_symbol) $NCBI_gene_ID
            set geneID($Previous_symbol) $NCBI_gene_ID
            set geneID($Alias_symbol) $NCBI_gene_ID
        }
    }
    
    if {![info exists geneID($geneName)]} {
        set geneID($geneName) ""
    }
    
    return $geneID($geneName)
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-omim.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


# No link is done without a check of the genomic location
#########################################################
# - AGS3 example:
#		grep AGS3 $ANNOTSV/share/AnnotSV/Annotations_Human/Gene-based/OMIM/20240806_morbid.tsv
#			AGS3    yes
#			=> AGS3 is morbid
#		grep AGS3 $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh38/genes.RefSeq.sorted.bed
#			=> No genomic coordinates
#		grep AGS3 $ANNOTSV/share/AnnotSV/Annotations_Human/Gene-based/NCBIandHGNCgeneID/geneSymbol_NCBIandHGNCgeneID.tsv
#			AGS3    26086
#			=> NCBIgeneID(AGS3) = 26086
#		grep 26086 $ANNOTSV/share/AnnotSV/Annotations_Human/Gene-based/NCBIandHGNCgeneID/geneSymbol_NCBIandHGNCgeneID.tsv
#			GPSM1   26086
#			AGS3    26086
#			DKFZP727I051    26086
#			=> Without AGS3 coordinates, we can't link this gene to other genes (GPSM1, DKFZP727I051)
proc memorizeGeneNameAlias {} {
    
    global g_AnnotSV
    global g_alias
    global g_L_coord
    
    if {$g_AnnotSV(organism) ne "Human"} { return }
    
    # Here, we memorize the RefSeq/ENSEMBL CHM13 gene coordinates (more complete than the GRCh37 and GRCh38)
    # => Will permit to check the different alias of a unique gene (only for overlapping genomic coordinates. cf issues 156 + 132)
    set geneCoordFile "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/CHM13/genes.$g_AnnotSV(tx).sorted.bed"
    foreach L [LinesFromFile $geneCoordFile] {
        set chrom [lindex $L 0]
        set start [lindex $L 1]
        set end [lindex $L 2]
        set gene [lindex $L 4]
        # We keep all the coordinates for each gene (different transcripts; genes present on the chrX and chrY (e.g. WASH6P); genes present at different locations (e.g. SNORD81))
        #
        # Example: WASH6P
        # grep WASH6P $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh38/genes.ENSEMBL.sorted.bed
        # X    156020825    156022415   +   WASH6P  ENST00000476066 156022415       156022415       156020825,156021505,156021693,156021998,156022322,      156021148,156021563,156021792,156022145,156022415,
        # Y    57209886     57212186    +   WASH6P  ENST00000711283 57212186        57212186        57209886,57210639,      57209980,57212186,
        #
        # Example SNORD81:
        # grep SNORD81 $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh38/genes.ENSEMBL.sorted.bed
        # 1       85592279        85592356        +       SNORD81 ENST00000363064 85592356        85592356        85592279,       85592356,
        # 5       18236122        18236196        +       SNORD81 ENST00000390976 18236196        18236196        18236122,       18236196,
        # 7       137287686       137287762       +       SNORD81 ENST00000365153 137287762       137287762       137287686,      137287762,
        lappend g_L_coord($gene) "$chrom $start $end"
    }
    foreach gene [array names g_L_coord] {
        set g_L_coord($gene) [lsort -unique $g_L_coord($gene)]
    }
    
    # Then, for gene names not present in the $geneCoordFile (previous symbol, alias), we use the NCBIgeneID to retrieve new alias
    # Memorize the link NCBIgeneID-GeneName
    set NCBIandHGNCgeneDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/NCBIandHGNCgeneID"
    foreach L [LinesFromFile "$NCBIandHGNCgeneDir/geneSymbol_NCBIandHGNCgeneID.tsv"] {
        set gene [lindex $L 0]
        set NCBIgeneID [lindex $L 1]
        set NCBIgeneIDfor($gene) $NCBIgeneID
        lappend L_genesFor($NCBIgeneID) $gene
    }
    
    # We memorize in "$g_alias" the association of the gene names overlapping the same genomic coordinates
    # Example line (genemap2.txt, GRCh38):
    # chr2    47806920        47906498        2p21    2p16.3  607871  FBXO11, FBX11, VIT1, PRMT9, IDDFBA      F-box only protein 11   FBXO11  80204   ENSG00000138081 ?2p16   Intellectual developmental disorder with dysmorphic facies and behavioral abnormalities, 618089 (3), Autosomal dominant        Fbxo11 (MGI:2147134)
    # => PRMT9 (previous symbol) is located on chromosome 4
    # => FBXO11 is not associated to PRMT9.
    foreach geneToMatch [array names g_L_coord] {
        
        if {![info exists NCBIgeneIDfor($geneToMatch)]} {continue}
        
        foreach coordTrue $g_L_coord($geneToMatch) {
            set trueChrom [lindex $coordTrue 0]
            set trueStart [lindex $coordTrue 1]
            set trueEnd [lindex $coordTrue 2]
            foreach aliasGene $L_genesFor($NCBIgeneIDfor($geneToMatch)) {
                if {[info exists g_L_coord($aliasGene)]} {
                    foreach coord $g_L_coord($aliasGene) {
                        set chrom [lindex $coord 0]
                        set start [lindex $coord 1]
                        set end [lindex $coord 2]
                        if {$trueChrom ne $chrom} {continue}
                        if {($start < $trueStart && $end > $trueStart) || ($start > $trueStart && $start < $trueEnd)} {
                            lappend g_alias($geneToMatch) $aliasGene
                            break
                        }
                    }
                }
            }
        }
    }
    foreach g [array names g_alias] {
        set g_alias($g) [lsort -unique $g_alias($g)]
    }
}



## - Check if the "genemap2.txt" file exists.
## - Check and create if necessary the 'date'_OMIM*annotations.tsv files.
proc checkOMIMfile {} {
    
    global g_AnnotSV
    global g_alias
    global g_L_coord
    
    
    ## Check if the OMIM file has been downloaded and create the formatted files if needed
    ######################################################################################
    set omimDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/OMIM"
    
    # INFO:
    # Genomic coordinates associated to the OMIM phenotype are available in GRCh38 in "genemap2.txt" ($OMIMfileDownloaded)
    set OMIMfileDownloaded [glob -nocomplain "$omimDir/genemap2.txt"]
    
    # Header:
    # Chromosome    Genomic Position Start  Genomic Position End    Cyto Location   Computed Cyto Location  MIM Number      Gene/Locus And Other Related Symbols    Gene Name       Approved Gene Symbol    Entrez Gene IDEnsembl Gene ID  Comments        Phenotypes      Mouse Gene Symbol/ID
    
    set OMIMfile1FormattedGzip [glob -nocomplain "$omimDir/*_OMIM-1-annotations.tsv.gz"]
    set OMIMfile2FormattedGzip [glob -nocomplain "$omimDir/*_OMIM-2-annotations.tsv.gz"]
    
    if {$OMIMfileDownloaded eq ""} {
        # No OMIM annotation to do
        return
    }
    
    if {[llength $OMIMfile1FormattedGzip]>1} {
        puts "Several OMIM files exist:"
        puts "$OMIMfile1FormattedGzip"
        puts "Keep only one: [lindex $OMIMfile1FormattedGzip end]\n"
        foreach omim [lrange $OMIMfile1FormattedGzip 0 end-1] {
            file rename -force $omim $omim.notused
        }
        set OMIMfile1FormattedGzip [lindex $OMIMfile1FormattedGzip end]
    }
    if {[llength $OMIMfile2FormattedGzip]>1} {
        puts "Several OMIM files exist:"
        puts "$OMIMfile2FormattedGzip"
        puts "Keep only one: [lindex $OMIMfile2FormattedGzip end]\n"
        foreach omim [lrange $OMIMfile2FormattedGzip 0 end-1] {
            file rename -force $omim $omim.notused
        }
        set OMIMfile2FormattedGzip [lindex $OMIMfile2FormattedGzip end]
    }
    
    if {$OMIMfile1FormattedGzip ne "" && $OMIMfile2FormattedGzip ne ""} {return}
    
    
    ## - Create the 'date'_OMIM-1-annotations.tsv and 'date'_OMIM-2-annotations.tsv files (headers):
    ##   Header1: genes, OMIM_ID
    ##   Header2: genes, OMIM_phenotype, OMIM_inheritance
    
    set OMIMfile1Formatted "$omimDir/[clock format [clock seconds] -format "%Y%m%d"]_OMIM-1-annotations.tsv"
    set OMIMfile2Formatted "$omimDir/[clock format [clock seconds] -format "%Y%m%d"]_OMIM-2-annotations.tsv"
    puts "\t...creation of [file tail $OMIMfile1Formatted.gz] and [file tail $OMIMfile2Formatted] ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    puts "\t   (in [file dirname $OMIMfile1Formatted.gz])"
    ReplaceTextInFile "genes\tOMIM_ID" $OMIMfile1Formatted
    ReplaceTextInFile "genes\tOMIM_phenotype\tOMIM_inheritance" $OMIMfile2Formatted
    
    
    # Parsing of the GRCh38 $OMIMfileDownloaded
    foreach L [LinesFromFile $OMIMfileDownloaded] {
        
        set Ls [split $L "\t"]
        # Header of "genemap2.txt":
        ###########################
        # # Chromosome
        # Genomic Position Start
        # Genomic Position End
        # Cyto Location
        # Computed Cyto Location
        # MIM Number
        # Gene/Locus And Other Related Symbols
        # Gene Name
        # Approved Gene Symbol
        # Entrez Gene ID
        # Ensembl Gene ID
        # Comments
        # Phenotypes
        # Mouse Gene Symbol/ID
        if {[regexp "^# Chromosome\tGenomic" $L]} {
            set i_chrom [lsearch -exact $Ls "# Chromosome"]
            if {$i_chrom == -1} {
                puts "$OMIMfileDownloaded:\nBad header line syntax. \"# Chromosome\" column not found - Exit with error"
                exit 2
            }
            set i_start [lsearch -exact $Ls "Genomic Position Start"]
            if {$i_start == -1} {
                puts "$OMIMfileDownloaded:\nBad header line syntax. \"Genomic Position Start\" column not found - Exit with error"
                exit 2
            }
            set i_end [lsearch -exact $Ls "Genomic Position End"]
            if {$i_end == -1} {
                puts "$OMIMfileDownloaded:\nBad header line syntax. \"Genomic Position End\" column not found - Exit with error"
                exit 2
            }
            set i_gene1 [lsearch -exact $Ls "Gene/Locus And Other Related Symbols"]
            if {$i_gene1 == -1} {
                puts "$OMIMfileDownloaded:\nBad header line syntax. \"Gene/Locus And Other Related Symbols\" column not found - Exit with error"
                exit 2
            }
            set i_gene2 [lsearch -exact $Ls "Approved Gene Symbol"]
            if {$i_gene2 == -1} {
                puts "$OMIMfileDownloaded:\nBad header line syntax. \"Approved Symbol\" column not found - Exit with error"
                exit 2
            }
            set i_mim [lsearch -exact $Ls "MIM Number"]
            if {$i_mim == -1} {
                puts "$OMIMfileDownloaded:\nBad header line syntax. \"Mim Number\" column not found - Exit with error"
                exit 2
            }
            set i_pheno [lsearch -exact $Ls "Phenotypes"]
            if {$i_pheno == -1} {
                puts "$OMIMfileDownloaded\nBad header line syntax. \"Phenotypes\" column not found - Exit with error"
                exit 2
            }
            continue
        }
        if {[regexp "^#" $L]} {continue}
        
        regsub "chr" [lindex $Ls $i_chrom] "" trueChromOMIM
        set trueStartOMIM [lindex $Ls $i_start]
        set trueEndOMIM [lindex $Ls $i_end]
        
        set gene1 [lindex $Ls $i_gene1]
        regsub -all " " $gene1 "" gene1
        
        set gene2 [lindex $Ls $i_gene2]
        set allGenesTmp [split $gene1 ","]
        if {$gene2 ne ""} {lappend allGenesTmp $gene2}
        
        set allGenesTmp [lsort -unique $allGenesTmp]
        
        # In "genemap2.txt", we only keep the gene names overlapping the given genomic coordinates associated with the OMIM
        # Example line:
        # chr2    47806920        47906498        2p21    2p16.3  607871  FBXO11, FBX11, VIT1, PRMT9, IDDFBA      F-box only protein 11   FBXO11  80204   ENSG00000138081 ?2p16   Intellectual developmental disorder with dysmorphic facies and behavioral abnormalities, 618089 (3), Autosomal dominant        Fbxo11 (MGI:2147134)
        # => PRMT9 (previous symbol) is located on chromosome 4
        # => we don't keep this gene for the OMIM "607871"
        set allGenes ""
        foreach gTmp $allGenesTmp {
            if {$gTmp eq ""} {continue}
            
            if {[info exists g_L_coord($gTmp)]} {
                foreach coord $g_L_coord($gTmp) {
                    set chrom [lindex $coord 0]
                    set start [lindex $coord 1]
                    set end [lindex $coord 2]
                    if {$trueChromOMIM ne $chrom} {continue}
                    if {($start < $trueStartOMIM && $end > $trueStartOMIM) || ($start > $trueStartOMIM && $start < $trueEndOMIM)} {
                        lappend allGenes $gTmp
                        # Add the alias for genes validated with coordinates
                        if {[info exists g_alias($gTmp)]} {
                            lappend allGenes {*}$g_alias($gTmp)
                        }
                        break
                    }
                }
            }
        }
        if {$allGenes eq ""} {continue}
        set allGenes [lsort -unique $allGenes]
        
        set mim [lindex $Ls $i_mim]
        set phenoTmp [lindex $Ls $i_pheno]
        regsub -all -nocase "Autosomal dominant" $phenoTmp "AD" phenoTmp
        regsub -all -nocase "Autosomal recessive" $phenoTmp "AR" phenoTmp
        regsub -all -nocase "X-linked dominant" $phenoTmp "XLD" phenoTmp
        regsub -all -nocase "X-linked recessive" $phenoTmp "XLR" phenoTmp
        regsub -all -nocase "Y-linked dominant" $phenoTmp "YLD" phenoTmp
        regsub -all -nocase "Y-linked recessive" $phenoTmp "YLR" phenoTmp
        regsub -all -nocase "X-linked" $phenoTmp "XL" phenoTmp
        regsub -all -nocase "Y-linked" $phenoTmp "YL" phenoTmp
        
        foreach p [split $phenoTmp ";"] {
            if {[regexp " *(.*\\\(\[0-9\]+\\\)),? *(.*)" $p match 1pheno 1inher]} {
                if {$1inher ne ""} {
                    regsub -all " *, +" $1inher "," 1inher
                    foreach g $allGenes {
                        regsub -all " " $g "" g
                        if {$g eq ""} {continue}
                        lappend Pheno($g) "$1pheno $1inher"
                        lappend Inheritance($g) {*}[split $1inher ";"]
                    }
                } else {
                    foreach g $allGenes {
                        regsub -all " " $g "" g
                        if {$g eq ""} {continue}
                        lappend Pheno($g) "$1pheno"
                    }
                }
                foreach g $allGenes {
                    regsub -all " " $g "" g
                    if {$g eq ""} {continue}
                    lappend L_genes $g
                    lappend Mim($g) $mim
                }
            }
        }
    }
    
    # creation of $OMIMfileFormatted.gz
    set L_genes [lsort -unique $L_genes]
    # Header :
    # Gene    OMIM_ID
    # Gene    OMIM_phenotype      OMIM_inheritance
    foreach g $L_genes {
        set Pheno($g) "[join [lsort -unique $Pheno($g)] ";"]"
        if {![info exists Inheritance($g)]} {set Inheritance($g) ""}
        set Inheritance($g) "[join [lsort -unique $Inheritance($g)] ";"]"
        if {[regexp "^;+$" $Inheritance($g)]} {set Inheritance($g) ""}
        WriteTextInFile "$g\t[join [lsort -unique $Mim($g)] ";"]" $OMIMfile1Formatted
        WriteTextInFile "$g\t$Pheno($g)\t$Inheritance($g)" $OMIMfile2Formatted
    }
    if {[catch {exec gzip $OMIMfile1Formatted} Message]} {
        puts "-- checkOMIMfile --"
        puts "gzip $OMIMfile1Formatted"
        puts "$Message\n"
    }
    if {[catch {exec gzip $OMIMfile2Formatted} Message]} {
        puts "-- checkOMIMfile --"
        puts "gzip $OMIMfile2Formatted"
        puts "$Message\n"
    }
    
    file delete -force $OMIMfileDownloaded
}

## - Check if the "morbidmap.txt" file exists.
## - Check and create if necessary the 'date'_morbid.tsv.gz file.
## - Check and create if necessary the 'date'_morbidCandidate.tsv.gz file.
proc checkMorbidfile {} {
    
    global g_AnnotSV
    global g_alias
    global g_L_coord
    
    set omimDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/OMIM"
    
    ## Check if the Morbid file has been downloaded the formatted
    ##################################################################
    set MorbidFileDownloaded [glob -nocomplain "$omimDir/morbidmap.txt"]
    # Header:
    # # Phenotype     Gene/Locus And Other Related Symbols    MIM Number      Cyto Location
    set MorbidFileFormattedGzip [glob -nocomplain "$omimDir/*_morbid.tsv.gz"]
    set MorbidCandidateFileFormattedGzip [glob -nocomplain "$omimDir/*_morbidCandidate.tsv.gz"]
    
    if {$MorbidFileDownloaded eq "" && $MorbidFileFormattedGzip eq ""} {
        # No Morbid annotation
        return
    }
    
    if {[llength $MorbidFileFormattedGzip]>1} {
        puts "Several Morbid Genes files exist:"
        puts "$MorbidFileFormattedGzip"
        puts "Keep only one: [lindex $MorbidFileFormattedGzip end]\n"
        foreach morbid [lrange $MorbidFileFormattedGzip 0 end-1] {
            file rename -force $morbid $morbid.notused
        }
        return
    }
    if {[llength $MorbidCandidateFileFormattedGzip]>1} {
        puts "Several Morbid Genes candidate files exist:"
        puts "$MorbidCandidateFileFormattedGzip"
        puts "Keep only one: [lindex $MorbidCandidateFileFormattedGzip end]\n"
        foreach morbid [lrange $MorbidCandidateFileFormattedGzip 0 end-1] {
            file rename -force $morbid $morbid.notused
        }
        return
    }
    
    if {$MorbidFileFormattedGzip eq ""} {
        ## - Create the 'date'_morbid.tsv file.
        ##   Header: genes, OMIM_morbid
        ## - Create the 'date'_morbidCandidate.tsv.gz file.
        ##   Header: genes, OMIM_morbid_candidate
        
        set MorbidFileFormatted "$omimDir/[clock format [clock seconds] -format "%Y%m%d"]_morbid.tsv"
        set MorbidCandidateFileFormatted "$omimDir/[clock format [clock seconds] -format "%Y%m%d"]_morbidCandidate.tsv"
        puts "\t...creation of [file tail $MorbidFileFormatted.gz] and [file tail $MorbidCandidateFileFormatted] ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        puts "\t   (in [file dirname $MorbidFileFormatted.gz])"
        ReplaceTextInFile "genes\tOMIM_morbid" $MorbidFileFormatted
        ReplaceTextInFile "genes\tOMIM_morbid_candidate" $MorbidCandidateFileFormatted
        
        # Parsing of $MorbidFileDownloaded
        set L_morbid {}
        set L_morbidCandidate {}
        foreach L [LinesFromFile $MorbidFileDownloaded] {
            set Ls [split $L "\t"]
            
            # Header from the downloaded file:
            # Phenotype     Gene Symbols    MIM Number      Cyto Location
            if {[regexp "^# Phenotype\t" $L]} {
                set i_gene  [lsearch $Ls "Gene/Locus And Other Related Symbols"]
                if {$i_gene == -1} {
                    puts "Bad header line syntax. \"Gene/Locus And Other Related Symbols\" column not found - Exit with error"
                    exit 2
                }
                set i_pheno [lsearch $Ls "# Phenotype"]
                if {$i_pheno == -1} {
                    puts "Bad header line syntax. Phenotype column not found - Exit with error"
                    exit 2
                }
                continue
            }
            if {[regexp "^#" $L]} {continue}
            
            set pheno [lindex $Ls $i_pheno]
            
            ## "[ ]", indicate "nondiseases", mainly genetic variations that lead to apparently abnormal laboratory test values (e.g., dysalbuminemic euthyroidal hyperthyroxinemia).
            if {[regexp "^\\\[.+\\\]" $pheno]} {continue}
            
            ## (1) The disorder is placed on the map based on its association with a gene, but the underlying defect is not known.
            ## (2) The disorder has been placed on the map by linkage or other statistical method; no mutation has been found.
            if {[regexp "\\\(1\\\)|\\\(2\\\)" $pheno]} {continue}
            
            ## The following lines are automatically either (3) or (4):
            ## (3) indicates that the molecular basis of the disorder is known; a mutation has been found in the gene.
            ## (4) indicates that a contiguous gene deletion or duplication syndrome, multiple genes are deleted or duplicated causing the phenotype.
            set gene [lindex $Ls $i_gene]
            set allGenes [split $gene ","]
            set allGenes [lsort -unique $allGenes]
            foreach g $allGenes {
                regsub -all " " $g "" g
                if {$g eq ""} {continue}
                ## "{ }", indicate mutations that contribute to susceptibility to multifactorial disorders (e.g., diabetes, asthma) or to susceptibility to infection (e.g., malaria).
                ## "?", before the phenotype name indicates that the relationship between the phenotype and gene is provisional.
                
                # Add the gene names (approved symbol + other related symbol)
                if {[regexp "^{.+}|^\\\?" $pheno]} {
                    if {[info exists g_alias($g)]} {
                        lappend L_morbidCandidate {*}$g_alias($g)
                    } else {
                        lappend L_morbidCandidate $g
                    }
                } else {
                    if {[info exists g_alias($g)]} {
                        lappend L_morbid {*}$g_alias($g)
                    } else {
                        lappend L_morbid $g
                    }
                }
            }
        }
        
        # creation of $MorbidFileFormatted.gz
        set L_morbid [lsort -unique $L_morbid]
        
        ## created header: genes, OMIM_morbid
        foreach g $L_morbid {
            WriteTextInFile "$g\tyes" $MorbidFileFormatted
        }
        
        if {[catch {exec gzip $MorbidFileFormatted} Message]} {
            puts "-- checkMorbidfile --"
            puts "gzip $MorbidFileFormatted"
            puts "$Message\n"
        }
        
        # creation of $MorbidCandidateFileFormatted.gz
        set L_morbidCandidate [lsort -unique $L_morbidCandidate]
        ## creted header: genes, OMIM_morbid_candidate
        foreach g $L_morbidCandidate {
            WriteTextInFile "$g\tyes" $MorbidCandidateFileFormatted
        }
        if {[catch {exec gzip $MorbidCandidateFileFormatted} Message]} {
            puts "-- checkMorbidfile --"
            puts "gzip $MorbidCandidateFileFormatted"
            puts "$Message\n"
        }
        
        file delete -force $MorbidFileDownloaded
    }
    
    # Defined in memorizeGeneNameAlias
    unset g_alias
    unset g_L_coord
}


proc fromOMIMtoPhenotype {OMIM} {
    global g_AnnotSV
    global g_phen
    global g_gene
    
    if { ! [info exists g_phen(DONE)]} {
        set OMIMfile1 [glob -nocomplain "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/OMIM/*_OMIM-1-annotations.tsv.gz"]
        # 20201107_OMIM-1-annotations.tsv.gz
        # Header = genes   OMIM_ID
        foreach L [LinesFromGZFile $OMIMfile1] {
            set Ls [split $L "\t"]
            set gene [lindex $Ls 0]
            set L_omim [split [lindex $Ls 1] ";"]
            foreach omim $L_omim {
                lappend g_gene($omim) $gene
            }
        }
        
        set OMIMfile2 [glob -nocomplain "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/OMIM/*_OMIM-2-annotations.tsv.gz"]
        # 20201107_OMIM-2-annotations.tsv.gz
        # Header = genes   OMIM_phenotype      OMIM_inheritance
        foreach L [LinesFromGZFile $OMIMfile2] {
            set Ls [split $L "\t"]
            set gene [lindex $Ls 0]
            set phenotype [lindex $Ls 1]
            regsub -all "\\\{|\\\}|\\\[|\\\]" $phenotype "" phenotype
            regsub -all "/" $phenotype ";" phenotype
            set g_phen($gene) $phenotype
        }
        
        set g_phen(DONE) 1
    }
    
    set phenotype ""
    if {[info exists g_gene($OMIM)]} {
        foreach gene $g_gene($OMIM) {
            if {[info exists g_phen($gene)]} {
                lappend phenotype $g_phen($gene)
            }
        }
        set phenotype [join $phenotype ";"]
    }
    
    return $phenotype
}

proc fromOMIMgeneToPhenotype {OMIMgene} {
    global g_AnnotSV
    global g_phen
    global g_gene
    
    if { ! [info exists g_phen(DONE)]} {
        fromOMIMtoPhenotype 617631 ;# use to initialize "g_phen" and "g_gene"
    }
    
    if {[info exists g_phen($OMIMgene)]} {
        return $g_phen($OMIMgene)
    } else {
        return ""
    }
}


proc isMorbid {gene} {
    global g_AnnotSV
    global g_morbid
    
    if {![info exists g_morbid(DONE)]} {
        set g_morbid(DONE) 1
        set morbidFile [glob -nocomplain "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/OMIM/*_morbid.tsv.gz"]
        if {$morbidFile ne ""} { ;# Doesn't exists for Mouse
            set f [open "| gzip -cd $morbidFile"]
            while {! [eof $f]} {
                set L [gets $f]
                set g_morbid([lindex $L 0]) 1
            }
            close $f
        }
    }
    
    if {[info exists g_morbid($gene)]} {
        return 1
    } else {
        return 0
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-pathogenicsnvindel.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


# Creation/update (if some data source files are presents) of:
# - $pathoSNVindelBEDfile
proc checkPathoSNVindelFile {} {
    
    global g_AnnotSV
    
    foreach genomeBuild {GRCh37 GRCh38} {
        ## Check if ClinVar file has been downloaded
        ############################################
        set pathoSNVindelDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSNVindel/$genomeBuild"
        set ClinVarFileDownloaded [lindex [glob -nocomplain "$pathoSNVindelDir/clinvar*.vcf.gz"] end]
        
        if {$ClinVarFileDownloaded ne ""} {
            # We have some ClinVar annotations to parse
            puts "\t   ...$genomeBuild pathogenic SNV/indels configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
            
            set pathoSNVindelBEDfile "$pathoSNVindelDir/pathogenic_SNVindel_$genomeBuild.bed"
            file delete -force $pathoSNVindelBEDfile
            set L_toWrite {}
            set f [open "| gzip -cd $ClinVarFileDownloaded"]
            while {! [eof $f]} {
                set L [gets $f]
                set Ls [split $L "\t"]
                if {[regexp "^#" $L]} {continue}
                set infos [lindex $Ls 7]
                
                # Selection of the pathogenic variants to keep:
                ###########################################
                # Criteria:
                # - “pathogenic” or “pathogenic/likely pathogenic” clinical significance (CLNSIG)
                # - “criteria_provided”, “_multiple_submitters” or “reviewed_by_expert_panel” SV review status (CLNREVSTAT)
                # - < $g_AnnotSV(SVminSize) bp in size (default 50)
                if {![regexp "ALLELEID=(\[^;\]+)?;.*CLNDISDB=(\[^;\]+)?;.*CLNDN\[INCL\]*=(\[^;\]+)?;.*CLNREVSTAT=(\[^;\]+)?;.*CLNSIG=Pathogenic" $infos match ALLELEID CLNDISDB CLNDN CLNREVSTAT]} {continue}
                if {![regexp "criteria_provided|_multiple_submitters|reviewed_by_expert_panel" $CLNREVSTAT]} {continue}
                if {[regexp "no_assertion_criteria_provided" $CLNREVSTAT]} {continue}
                
                set ref [lindex $Ls 3]
                set alt [lindex $Ls 4]
                set SVlength [expr {abs([string length $ref]-[string length $alt])+1}]
                if {$SVlength >= $g_AnnotSV(SVminSize)} {continue}
                set chrom [lindex $Ls 0]
                set start [lindex $Ls 1]
                set end [expr {$start+$SVlength}]
                set coord "${chrom}:${start}-$end"
                
                # CLNDISDB example :
                # Human_Phenotype_Ontology:HP:0000556,Human_Phenotype_Ontology:HP:0007736,Human_Phenotype_Ontology:HP:0007910,Human_Phenotype_Ontology:HP:0007974,Human_Phenotype_Ontology:HP:0007982,MONDO:MONDO:0019118,MeSH:D058499,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED_CT:314407005|MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553|MedGen:CN517202
                set L_HPO {}
                set i 0
                while {[regexp -start $i -indices "Human_Phenotype_Ontology:HP:\[0-9\]+" $CLNDISDB indices]} {
                    set HPO [string range $CLNDISDB [lindex $indices 0] [lindex $indices 1]]
                    regsub "^Human_Phenotype_Ontology:" $HPO "" HPO
                    lappend L_HPO $HPO
                    set i [lindex $indices 1]
                }
                regsub "(\\\|)?not_provided" $CLNDN "" CLNDN
                set toWrite "$chrom\t$start\t$end\t$CLNDN\t$L_HPO\tCLN:$ALLELEID\t$coord"
                lappend L_toWrite "$toWrite"
            }
            close $f
            
            # Writing:
            ##########
            puts "\t       ([llength $L_toWrite] pathogenic SNV/indel)"
            if {$L_toWrite ne {}} {
                WriteTextInFile [join $L_toWrite "\n"] $pathoSNVindelBEDfile
            }
            
            # Clean:
            ########
            file delete -force $ClinVarFileDownloaded
            
            # Creation of *.formatted.bed
            #############################
            if {[file exists $pathoSNVindelBEDfile]} {
                regsub ".bed$" $pathoSNVindelBEDfile ".formatted.bed" pathoSNVindelBEDfile_Formatted
                if {[catch {checkBed $pathoSNVindelBEDfile $pathoSNVindelDir} Message]} {
                    puts "-- checkPathoSNVindelFile --"
                    puts $Message
                }
                file delete -force $pathoSNVindelBEDfile
            }
            
            # Creation of *.sorted.bed
            ##########################
            if {[file exists $pathoSNVindelBEDfile_Formatted]} {
                regsub ".bed$" $pathoSNVindelBEDfile ".sorted.bed" pathoSNVindelBEDfile_Sorted
                # Intersection with very large files can cause trouble with excessive memory usage.
                # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
                set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
                ReplaceTextInFile "#!/bin/bash" $sortTmpFile
                WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
                WriteTextInFile "export LC_ALL=C" $sortTmpFile
                WriteTextInFile "sort -k1,1 -k2,2n $pathoSNVindelBEDfile_Formatted > $pathoSNVindelBEDfile_Sorted" $sortTmpFile
                file attributes $sortTmpFile -permissions 0755
                if {[catch {eval exec bash $sortTmpFile} Message]} {
                    puts "-- checkPathoSNVindelFile --"
                    puts "sort -k1,1 -k2,2n $pathoSNVindelBEDfile_Formatted > $pathoSNVindelBEDfile_Sorted"
                    puts "$Message"
                    puts "Exit with error"
                    exit 2
                }
                file delete -force $sortTmpFile
                file delete -force $pathoSNVindelBEDfile_Formatted
            }
        }
    }
    
    return
}



# Return the overlapped SV annotation
proc pathoSNVindelAnnotation {SVchrom SVstart SVend} {
    
    global g_AnnotSV
    global pathoSNVindelText
    
    set pathoSNVindelDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSNVindel/$g_AnnotSV(genomeBuild)"
    set pathoSNVindelBEDfile "$pathoSNVindelDir/pathogenic_SNVindel_$g_AnnotSV(genomeBuild).sorted.bed"
    
    if {![info exists pathoSNVindelText(DONE)]} {
        # headerOutput:  P_snvindel_nb P_snvindel_phen
        set pathoSNVindelText(Empty) "\t"
        
        # Intersect
        if {[file exists $pathoSNVindelBEDfile]} {
            regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.pathogenic-snvindel" tmpFile
            set tmpFile "$g_AnnotSV(outputDir)/[file tail $tmpFile]"
            file delete -force $tmpFile
            # -f 1.0 : the feature in B overlaps at least 100% of the A feature.
            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $pathoSNVindelBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile} Message]} {
                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $pathoSNVindelBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile} Message]} {
                    puts "-- pathoSNVindelAnnotation --"
                    puts "$g_AnnotSV(bedtools) intersect -sorted -a $pathoSNVindelBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile"
                    puts "$Message"
                    puts "Exit with error"
                    exit 2
                }
            }
            # Parse
            set f [open $tmpFile]
            while {![eof $f]} {
                set L [gets $f]
                if {$L eq ""} {continue}
                set Ls [split $L "\t"]
                
                set pathogenic_phen [lindex $Ls 3]
                #set pathogenic_hpo [lindex $Ls 4]
                #set pathogenic_source [lindex $Ls 5]
                #set pathogenic_coord [lindex $Ls 6]
                
                set SVtoAnn_chrom [lindex $Ls 7]
                set SVtoAnn_start [lindex $Ls 8]
                set SVtoAnn_end   [lindex $Ls 9]
                
                set SVtoAnn "$SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end"
                lappend L_allSVtoAnn $SVtoAnn
                foreach p [split $pathogenic_phen "|"] {
                    if {$p ne ""} {lappend L_pathogenic_phen($SVtoAnn) "$p"}
                }
                if {![info exists L_pathogenic_phen($SVtoAnn)]} {set L_pathogenic_phen($SVtoAnn) {}}
                #lappend L_pathogenic_hpo($SVtoAnn) {*}[split $pathogenic_hpo "|"]
                #lappend L_pathogenic_source($SVtoAnn) $pathogenic_source
                #lappend L_pathogenic_coord($SVtoAnn) $pathogenic_coord
                if {[info exists nb_snvindel($SVtoAnn)]} {
                    incr nb_snvindel($SVtoAnn)
                } else {
                    set nb_snvindel($SVtoAnn) 1
                }
            }
            file delete -force $tmpFile
            
            # Loading pathogenic snvindel final annotation for each SV
            if {[info exists L_allSVtoAnn]} {
                foreach SVtoAnn [lsort -unique $L_allSVtoAnn] {
                    lappend L_pathoSNVindelText($SVtoAnn) $nb_snvindel($SVtoAnn)
                    lappend L_pathoSNVindelText($SVtoAnn) "[join [lsort -unique $L_pathogenic_phen($SVtoAnn)] ";"]"
                    #lappend L_pathoSNVindelText($SVtoAnn) "[join $L_pathogenic_hpo($SVtoAnn) ";"]"
                    #lappend L_pathoSNVindelText($SVtoAnn) "[join $L_pathogenic_source($SVtoAnn) ";"]"
                    #lappend L_pathoSNVindelText($SVtoAnn) "[join $L_pathogenic_coord($SVtoAnn) ";"]"
                    set pathoSNVindelText($SVtoAnn) [join $L_pathoSNVindelText($SVtoAnn) "\t"]
                }
            }
        }
        set pathoSNVindelText(DONE) 1
    }
    
    if {[info exist pathoSNVindelText($SVchrom,$SVstart,$SVend)]} {
        return $pathoSNVindelText($SVchrom,$SVstart,$SVend)
    } else {
        return $pathoSNVindelText(Empty)
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-pathogenicsv.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


# Creation/update (if some data source files are presents) of:
# - $pathogenicLossFile_Sorted
# - $pathogenicGainFile_Sorted
# - $pathogenicInsFile_Sorted
# - $pathogenicInvFile_Sorted
proc checkPathogenicFiles {} {
    
    global g_AnnotSV
    
    foreach genomeBuild {GRCh37 GRCh38 CHM13} {
        set pathogenicDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$genomeBuild"
        
        # Files to create/update
        set pathogenicLossFile_Sorted "$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.sorted.bed"
        set pathogenicGainFile_Sorted "$pathogenicDir/pathogenic_Gain_SV_$genomeBuild.sorted.bed"
        set pathogenicInsFile_Sorted "$pathogenicDir/pathogenic_Ins_SV_$genomeBuild.sorted.bed"
        set pathogenicInvFile_Sorted "$pathogenicDir/pathogenic_Inv_SV_$genomeBuild.sorted.bed"
        
        # Text to write only if an update of the sources is requested (in the check* proc).
        set g_AnnotSV(pathogenicText) "\t...creation/update of the \"pathogenic_*_SV_$genomeBuild.sorted.bed\" files ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])\n\t   (done only once)"
        
        # Creation of pathogenic*File_Tmp (not formatted and sorted)
        set pathogenicLossFile_Tmp "$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.tmp.bed"
        set pathogenicGainFile_Tmp "$pathogenicDir/pathogenic_Gain_SV_$genomeBuild.tmp.bed"
        set pathogenicInsFile_Tmp "$pathogenicDir/pathogenic_Ins_SV_$genomeBuild.tmp.bed"
        set pathogenicInvFile_Tmp "$pathogenicDir/pathogenic_Inv_SV_$genomeBuild.tmp.bed"
        file delete -force $pathogenicLossFile_Tmp
        file delete -force $pathogenicGainFile_Tmp
        file delete -force $pathogenicInsFile_Tmp
        file delete -force $pathogenicInvFile_Tmp
        checkClinVar_PathogenicFile $genomeBuild
        checkClinGenHITS_pathogenicFile $genomeBuild
        checkdbVar_PathogenicFile $genomeBuild
        checkOMIM_PathogenicFile $genomeBuild
        catch {unset g_AnnotSV(pathogenicText)}
        
        # Creation of *.formatted.bed
        foreach SVtype {Loss Gain Ins Inv} {
            set pathogenicFile_Sorted "$pathogenicDir/pathogenic_${SVtype}_SV_$genomeBuild.sorted.bed"
            set pathogenicFile_Tmp "$pathogenicDir/pathogenic_${SVtype}_SV_$genomeBuild.tmp.bed"
            if {[file exists $pathogenicFile_Tmp]} {
                # Add the SV from $pathogenic*File_Sorted
                if {[file exists $pathogenicFile_Sorted]} {
                    set id_file1 [open "$pathogenicFile_Sorted" r]
                    set id_file2 [open "$pathogenicFile_Tmp" a]
                    while { [gets $id_file1 line] >= 0 } {
                        puts $id_file2 $line
                    }
                    close $id_file1
                    close $id_file2
                }
                # Sort:
                # -> Creation of $pathogenicFile_Tmp.formatted.bed
                if {[catch {checkBed $pathogenicFile_Tmp $pathogenicDir} Message]} {
                    puts "-- checkPathogenicFiles --"
                    puts $Message
                }
                
                file delete -force $pathogenicFile_Tmp
            }
        }
        
        # Creation of *.sorted.bed:
        # Intersection with very large files can cause trouble with excessive memory usage.
        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        foreach SVtype {Loss Gain Ins Inv} {
            set pathogenicFile_TmpFormatted "$pathogenicDir/pathogenic_${SVtype}_SV_$genomeBuild.tmp.formatted.bed"
            if {![file exist $pathogenicFile_TmpFormatted]} {continue}
            set pathogenicFile_Sorted "$pathogenicDir/pathogenic_${SVtype}_SV_$genomeBuild.sorted.bed"
            set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
            ReplaceTextInFile "#!/bin/bash" $sortTmpFile
            WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
            WriteTextInFile "export LC_ALL=C" $sortTmpFile
            WriteTextInFile "sort -k1,1 -k2,2n $pathogenicFile_TmpFormatted > $pathogenicFile_Sorted" $sortTmpFile
            file attributes $sortTmpFile -permissions 0755
            if {[catch {eval exec bash $sortTmpFile} Message]} {
                puts "-- checkPathogenicFiles --"
                puts "sort -k1,1 -k2,2n $pathogenicFile_TmpFormatted > $pathogenicFile_Sorted"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
            file delete -force $sortTmpFile
            file delete -force $pathogenicFile_TmpFormatted
        }
    }
    
    # Remove some columns from g_AnnotSV(outputColHeader) if the corresponding annotation file doesn't exist
    foreach svtype {"Gain" "Loss" "Ins" "Inv"} {
        set pathogenicFile_Sorted "$pathogenicDir/pathogenic_${svtype}_SV_$genomeBuild.sorted.bed"
        if {![file exists $pathogenicFile_Sorted]} {
            set newList {}
            foreach e "$g_AnnotSV(outputColHeader)" {
                if {[regexp "^P_[string tolower ${svtype}]_" $e]} {continue}
                lappend newList $e
            }
            set g_AnnotSV(outputColHeader) $newList
        }
    }
    
    return
}




################################################################################################
## In all the next "check*File" proc, create and then complete the following file:
##   - Pathogenic_Gain_SV_$genomeBuild.tmp.bed
##   - Pathogenic_Loss_SV_$genomeBuild.tmp.bed
##   - Pathogenic_Ins_SV_$genomeBuild.tmp.bed
##   - Pathogenic_Inv_SV_$genomeBuild.tmp.bed
################################################################################################

proc checkClinVar_PathogenicFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if ClinVar file has been downloaded
    ############################################
    set pathogenicDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$genomeBuild"
    set ClinVarFileDownloaded [lindex [glob -nocomplain "$pathogenicDir/clinvar*.vcf.gz"] end]
    
    if {$ClinVarFileDownloaded ne ""} {
        # We have some ClinVar annotations to add in $pathogenic*File
        if {[info exists g_AnnotSV(pathogenicText)]} {
            puts $g_AnnotSV(pathogenicText)
            unset g_AnnotSV(pathogenicText)
        }
        puts "\t   >>> ClinVar parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        set pathogenicLossFile_Tmp "$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.tmp.bed"
        set pathogenicGainFile_Tmp "$pathogenicDir/pathogenic_Gain_SV_$genomeBuild.tmp.bed"
        set pathogenicInsFile_Tmp "$pathogenicDir/pathogenic_Ins_SV_$genomeBuild.tmp.bed"
        set pathogenicInvFile_Tmp "$pathogenicDir/pathogenic_Inv_SV_$genomeBuild.tmp.bed"
        set L_toWriteLoss {}
        set L_toWriteGain {}
        set L_toWriteIns {}
        set L_toWriteInv {}
        set f [open "| gzip -cd $ClinVarFileDownloaded"]
        while {! [eof $f]} {
            set L [gets $f]
            set Ls [split $L "\t"]
            if {[regexp "^#" $L]} {continue}
            set infos [lindex $Ls 7]
            
            # Selection of the pathogenic variants to keep:
            ###########################################
            # Criteria:
            # - “pathogenic” or “pathogenic/likely pathogenic” clinical significance (CLNSIG)
            # - “criteria_provided”, “_multiple_submitters” or “reviewed_by_expert_panel” SV review status (CLNREVSTAT)
            # - "Deletion" or "Duplication" or "Insertion" or "Inversion" SV type (CLNVC)
            # - ≥ $g_AnnotSV(SVminSize) bp in size (default 50)
            if {![regexp "ALLELEID=(\[^;\]+)?;.*CLNDISDB=(\[^;\]+)?;.*CLNDN\[INCL\]*=(\[^;\]+)?;.*CLNREVSTAT=(\[^;\]+)?;.*CLNSIG=Pathogenic.*?CLNVC=(\[^;\]+)?" $infos match ALLELEID CLNDISDB CLNDN CLNREVSTAT CLNVC]} {continue}
            if {![regexp "criteria_provided|_multiple_submitters|reviewed_by_expert_panel" $CLNREVSTAT]} {continue}
            if {[regexp "no_assertion_criteria_provided" $CLNREVSTAT]} {continue}
            
            set ref [lindex $Ls 3]
            set alt [lindex $Ls 4]
            set SVlength [expr {abs([string length $ref]-[string length $alt])+1}]
            if {$SVlength < $g_AnnotSV(SVminSize)} {continue}
            set chrom [lindex $Ls 0]
            set start [lindex $Ls 1]
            set end [expr {$start+$SVlength}]
            set coord "${chrom}:${start}-$end"
            
            # CLNDISDB example :
            # Human_Phenotype_Ontology:HP:0000556,Human_Phenotype_Ontology:HP:0007736,Human_Phenotype_Ontology:HP:0007910,Human_Phenotype_Ontology:HP:0007974,Human_Phenotype_Ontology:HP:0007982,MONDO:MONDO:0019118,MeSH:D058499,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED_CT:314407005|MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553|MedGen:CN517202
            set L_HPO {}
            set i 0
            while {[regexp -start $i -indices "Human_Phenotype_Ontology:HP:\[0-9\]+" $CLNDISDB indices]} {
                set HPO [string range $CLNDISDB [lindex $indices 0] [lindex $indices 1]]
                regsub "^Human_Phenotype_Ontology:" $HPO "" HPO
                lappend L_HPO $HPO
                set i [lindex $indices 1]
            }
            regsub "(\\\|)?not_provided" $CLNDN "" CLNDN
            set toWrite "$chrom\t$start\t$end\t$CLNDN\t$L_HPO\tCLN:$ALLELEID\t$coord"
            if {$CLNVC eq "Deletion"} {
                lappend L_toWriteLoss "$toWrite"
            } elseif {$CLNVC eq "Duplication"} {
                lappend L_toWriteGain "$toWrite"
            } elseif {$CLNVC eq "Insertion"} {
                lappend L_toWriteIns "$toWrite"
            } elseif {$CLNVC eq "Inversion"} {
                lappend L_toWriteInv "$toWrite"
            }
            
        }
        close $f
        
        # Writing:
        ##########
        puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV Ins + [llength $L_toWriteInv] SV Inv)"
        if {$L_toWriteLoss ne {}} {
            WriteTextInFile [join $L_toWriteLoss "\n"] $pathogenicLossFile_Tmp
        }
        if {$L_toWriteGain ne {}} {
            WriteTextInFile [join $L_toWriteGain "\n"] $pathogenicGainFile_Tmp
        }
        if {$L_toWriteIns ne {}} {
            WriteTextInFile [join $L_toWriteIns "\n"]  $pathogenicInsFile_Tmp
        }
        if {$L_toWriteInv ne {}} {
            WriteTextInFile [join $L_toWriteInv "\n"]  $pathogenicInvFile_Tmp
        }
        
        # Clean:
        ########
        file delete -force $ClinVarFileDownloaded
    }
    
    return
}


proc checkClinGenHITS_pathogenicFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if ClinGen files have been downloaded
    ##############################################
    set pathogenicDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$genomeBuild"
    set ClinGenFileDownloaded1 [glob -nocomplain "$pathogenicDir/ClinGen_gene_curation_list_$genomeBuild.tsv"]
    set ClinGenFileDownloaded2 [glob -nocomplain "$pathogenicDir/ClinGen_region_curation_list_$genomeBuild.tsv"]
    
    if {$ClinGenFileDownloaded1 ne "" || $ClinGenFileDownloaded2 ne ""} {
        # We have some ClinGen annotations to add in $pathogenic*File
        if {[info exists g_AnnotSV(pathogenicText)]} {
            puts $g_AnnotSV(pathogenicText)
            unset g_AnnotSV(pathogenicText)
        }
        puts "\t   >>> ClinGen parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    } else {return}
    
    set L_toWriteLoss {}
    set L_toWriteGain {}
    set pathogenicLossFile_Tmp "$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.tmp.bed"
    set pathogenicGainFile_Tmp "$pathogenicDir/pathogenic_Gain_SV_$genomeBuild.tmp.bed"
    
    ## ClinGenFileDownloaded1 parsing
    #################################
    set f [open "$ClinGenFileDownloaded1"]
    while {! [eof $f]} {
        set L [gets $f]
        set Ls [split $L "\t"]
        # Header 1:
        ###########
        #Gene Symbol    Gene ID cytoBand        Genomic Location        Haploinsufficiency Score        Haploinsufficiency Description  Haploinsufficiency PMID1        Haploinsufficiency PMID2        Haploinsufficiency PMID3        Haploinsufficiency PMID4        Haploinsufficiency PMID5        Haploinsufficiency PMID6        Triplosensitivity Score Triplosensitivity Description   Triplosensitivity PMID1 Triplosensitivity PMID2 Triplosensitivity PMID3 Triplosensitivity PMID4 Triplosensitivity PMID5 Triplosensitivity PMID6 Date Last Evaluated     Haploinsufficiency Disease ID   Triplosensitivity Disease ID
        
        # Selection of the pathogenic variants to keep:
        ###############################################
        if {[regexp "(^#Gene Symbol)|(^#ISCA ID)" $L]} {
            set i_id 0 ; #"Gene Symbol" (gene) or #"ISCA ID" (region)
            set i_coord [lsearch -exact $Ls "Genomic Location"]; if {$i_coord == -1} {puts "$ClinGenFileDownloaded"; puts "Bad header line syntax. \"Genomic Location\" column not found - Exit with error"; exit 2}
            set i_hi [lsearch -exact $Ls "Haploinsufficiency Score"]; if {$i_hi == -1} {puts "$ClinGenFileDownloaded"; puts "Bad header line syntax. \"Haploinsufficiency Score\" column not found - Exit with error"; exit 2}
            set i_ts [lsearch -exact $Ls "Triplosensitivity Score"]; if {$i_ts == -1} {puts "$ClinGenFileDownloaded"; puts "Bad header line syntax. \"Triplosensitivity\" Score column not found - Exit with error"; exit 2}
            continue
        }
        if {[regexp "^#" $L]} {continue}
        
        set ID [lindex $Ls $i_id]
        set coord [lindex $Ls $i_coord]
        regsub -all "(chr)| " $coord "" coord
        if { ![regexp "(\[0-9XYMT\]+):(\[0-9\]+)-(\[0-9\]+)" $coord match chrom start end] } {continue} ;# In GRCh38, some coordinates = "tbd" (to be determined)
        set hi [lindex $Ls $i_hi]
        set ts [lindex $Ls $i_ts]
        set hpo ""
        if {$hi eq "3"} {
            # Phenotype is only available for Gene ID (not for ISCA region)
            set phenotype [fromOMIMgeneToPhenotype $ID]
            lappend L_toWriteLoss "$chrom\t$start\t$end\t$phenotype\t$hpo\tHI3:$ID\t$coord"
        }
        if {$ts eq "3"} {
            set phenotype [fromOMIMgeneToPhenotype $ID]
            lappend L_toWriteGain "$chrom\t$start\t$end\t$phenotype\t$hpo\tTS3:$ID\t$coord"
        }
    }
    close $f
    
    
    ## ClinGenFileDownloaded2 parsing
    #################################
    set f [open "$ClinGenFileDownloaded2"]
    while {! [eof $f]} {
        set L [gets $f]
        set Ls [split $L "\t"]
        
        # Header 2:
        ###########
        #ISCA ID        ISCA Region Name        cytoBand        Genomic Location        Haploinsufficiency Score        Haploinsufficiency Description  Haploinsufficiency PMID1        Haploinsufficiency PMID2       Haploinsufficiency PMID3 Haploinsufficiency PMID4        Haploinsufficiency PMID5        Haploinsufficiency PMID6        Triplosensitivity Score Triplosensitivity Description   Triplosensitivity PMID1 Triplosensitivity PMID2 Triplosensitivity PMID3 Triplosensitivity PMID4 Triplosensitivity PMID5 Triplosensitivity PMID6 Date Last Evaluated     Haploinsufficiency Disease ID   Triplosensitivity Disease ID
        
        # Selection of the pathogenic variants to keep:
        ###########################################
        if {[regexp "(^#Gene Symbol)|(^#ISCA ID)" $L]} {
            set i_id 0 ; #"Gene Symbol" (gene) or #"ISCA ID" (region)
            set i_coord [lsearch -exact $Ls "Genomic Location"]; if {$i_coord == -1} {puts "$ClinGenFileDownloaded"; puts "Bad header line syntax. \"Genomic Location\" column not found - Exit with error"; exit 2}
            set i_hi [lsearch -exact $Ls "Haploinsufficiency Score"]; if {$i_hi == -1} {puts "$ClinGenFileDownloaded"; puts "Bad header line syntax. \"Haploinsufficiency Score\" column not found - Exit with error"; exit 2}
            set i_ts [lsearch -exact $Ls "Triplosensitivity Score"]; if {$i_ts == -1} {puts "$ClinGenFileDownloaded"; puts "Bad header line syntax. \"Triplosensitivity\" Score column not found - Exit with error"; exit 2}
            set i_isca [lsearch -exact $Ls "ISCA Region Name"]; if {$i_isca == -1} {puts "$ClinGenFileDownloaded"; puts "Bad header line syntax. \"ISCA Region Name\" column not found - Exit with error"; exit 2}
            continue
        }
        if {[regexp "^#" $L]} {continue}
        
        set ID [lindex $Ls $i_id]
        set coord [lindex $Ls $i_coord]
        regsub -all "(chr)| " $coord "" coord
        if { ![regexp "(\[0-9XYMT\]+):(\[0-9\]+)-(\[0-9\]+)" $coord match chrom start end] } {continue} ;# In GRCh38, some coordinates = "tbd" (to be determined)
        set hi [lindex $Ls $i_hi]
        set ts [lindex $Ls $i_ts]
        set iscaRegionName [lindex $Ls $i_isca]
        set hpo ""
        if {$hi eq "3"} {
            # Phenotype is only available for Gene ID (not for ISCA region)
            set phenotype "$iscaRegionName"
            lappend L_toWriteLoss "$chrom\t$start\t$end\t$phenotype\t$hpo\tHI3:$ID\t$coord"
        }
        if {$ts eq "3"} {
            set phenotype "$iscaRegionName"
            lappend L_toWriteGain "$chrom\t$start\t$end\t$phenotype\t$hpo\tTS3:$ID\t$coord"
        }
    }
    close $f
    
    
    # Writing:
    ##########
    puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain)"
    if {$L_toWriteLoss ne {}} {
        WriteTextInFile [join $L_toWriteLoss "\n"] $pathogenicLossFile_Tmp
    }
    if {$L_toWriteGain ne {}} {
        WriteTextInFile [join $L_toWriteGain "\n"] $pathogenicGainFile_Tmp
    }
    
    # Clean:
    ########
    file delete -force $ClinGenFileDownloaded1
    file delete -force $ClinGenFileDownloaded2
    
    return
}


proc checkdbVar_PathogenicFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if dbVar files have been downloaded
    ############################€###############
    set pathogenicDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$genomeBuild"
    set dbVarFileDownloaded1 [glob -nocomplain "$pathogenicDir/$genomeBuild.nr_deletions.pathogenic.tsv.gz"]    ; # Loss
    set dbVarFileDownloaded2 [glob -nocomplain "$pathogenicDir/$genomeBuild.nr_duplications.pathogenic.tsv.gz"] ; # Gain
    set dbVarFileDownloaded3 [glob -nocomplain "$pathogenicDir/$genomeBuild.nr_insertions.pathogenic.tsv.gz"]   ; # Ins
    
    if {$dbVarFileDownloaded1 ne "" || $dbVarFileDownloaded2 ne "" || $dbVarFileDownloaded3 ne ""} {
        # We have some dbVar annotations to add in $pathogenic*File
        if {[info exists g_AnnotSV(pathogenicText)]} {
            puts $g_AnnotSV(pathogenicText)
            unset g_AnnotSV(pathogenicText)
        }
        puts "\t   >>> dbVar parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    } else {return}
    
    set L_files "$dbVarFileDownloaded1"
    lappend L_files "$dbVarFileDownloaded2"
    lappend L_files "$dbVarFileDownloaded3"
    
    set L_toWriteLoss {}
    set L_toWriteGain {}
    set L_toWriteIns {}
    set pathogenicLossFile_Tmp "$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.tmp.bed"
    set pathogenicGainFile_Tmp "$pathogenicDir/pathogenic_Gain_SV_$genomeBuild.tmp.bed"
    set pathogenicInsFile_Tmp "$pathogenicDir/pathogenic_Ins_SV_$genomeBuild.tmp.bed"
    
    foreach dbVarFileDownloaded "$L_files" {
        
        if {[regexp "deletions" $dbVarFileDownloaded]} {
            set svtype "Loss"
        } elseif {[regexp "duplications" $dbVarFileDownloaded]} {
            set svtype "Gain"
        } elseif {[regexp "insertions" $dbVarFileDownloaded]} {
            set svtype "Ins"
        }
        
        if {$dbVarFileDownloaded ne ""} {
            set f [open "| gzip -cd $dbVarFileDownloaded"]
            while {! [eof $f]} {
                set L [gets $f]
                set Ls [split $L "\t"]
                # Header 1 and 2:
                #################
                # #chr    outermost_start outermost_stop  variant_count   variant_type    method  analysis        platform        study   variant clinical_assertion      clinvar_accession       bin_size
                
                # Selection of the pathogenic variants to keep:
                ###############################################
                if {[regexp "^#chr" $L]} {
                    set i_chr 0
                    set i_start [lsearch -exact $Ls "outermost_start"]; if {$i_start == -1} {puts "$dbVarFileDownloaded"; puts "Bad header line syntax. outermost_start column not found - Exit with error"; exit 2}
                    set i_stop [lsearch -exact $Ls "outermost_stop"]; if {$i_stop == -1} {puts "$dbVarFileDownloaded"; puts "Bad header line syntax. outermost_stop column not found - Exit with error"; exit 2}
                    set i_source [lsearch -exact $Ls "variant"]; if {$i_source == -1} {puts "$dbVarFileDownloaded"; puts "Bad header line syntax. variant column not found - Exit with error"; exit 2}
                    
                    continue
                }
                if {[string index $L 0] eq "#" || $L eq ""} {continue}
                set chrom [lindex $Ls $i_chr]
                set start [lindex $Ls $i_start]
                set end [lindex $Ls $i_stop]
                set Source [lindex $Ls $i_source]
                set coord "$chrom:${start}-$end"
                set phenotype ""
                set hpo ""
                
                lappend L_toWrite$svtype "$chrom\t$start\t$end\t$phenotype\t$hpo\tdbVar:$Source\t$coord"
            }
            close $f
        }
    }
    
    # Writing:
    ##########
    puts "\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV Ins)"
    if {$L_toWriteLoss ne {}} {
        WriteTextInFile [join $L_toWriteLoss "\n"] $pathogenicLossFile_Tmp
    }
    if {$L_toWriteGain ne {}} {
        WriteTextInFile [join $L_toWriteGain "\n"] $pathogenicGainFile_Tmp
    }
    if {$L_toWriteIns ne {}} {
        WriteTextInFile [join $L_toWriteIns "\n"] $pathogenicInsFile_Tmp
    }
    
    # Clean:
    ########
    file delete -force $dbVarFileDownloaded1
    file delete -force $dbVarFileDownloaded2
    file delete -force $dbVarFileDownloaded3
    
    return
}


proc checkOMIM_PathogenicFile {genomeBuild} {
    
    global g_AnnotSV
    
    ## Check if OMIM file has been downloaded
    #########################################
    set pathogenicDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$genomeBuild"
    set OMIMfileDownloaded [glob -nocomplain "$pathogenicDir/*_morbid.tsv.gz"]
    
    
    if {$OMIMfileDownloaded ne ""} {
        # We have some OMIM annotations to add in $pathogenicLossFile
        if {[info exists g_AnnotSV(pathogenicText)]} {
            puts $g_AnnotSV(pathogenicText)
            unset g_AnnotSV(pathogenicText)
        }
        puts "\t   >>> OMIM morbid genes parsing ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        # Genes coordinates
        set genesDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$genomeBuild"
        set genesFileFormatted "[glob -nocomplain $genesDir/genes.$g_AnnotSV(tx).sorted.bed]"
        foreach L [LinesFromFile $genesFileFormatted] {
            set Ls [split $L "\t"]
            set geneName [lindex $Ls 4]
            set chrom($geneName) [lindex $Ls 0]
            set start($geneName) [lindex $Ls 1]
            set end($geneName)   [lindex $Ls 2]
        }
        
        # Morbid genes
        set L_toWriteLoss {}
        set f [open "| gzip -cd $OMIMfileDownloaded"]
        set L_HPO ""
        while {! [eof $f]} {
            set L [gets $f]
            set g [lindex $L 0]
            if {$g eq ""} {continue}
            set pheno [fromOMIMgeneToPhenotype $g]
            if {[info exists chrom($g)]} {
                set coord "$chrom($g):$start($g)"
                append coord "-$end($g)"
                regsub -all "{|}" $pheno "" pheno
                set toWrite "$chrom($g)\t$start($g)\t$end($g)\t$pheno\t$L_HPO\tmorbid:$g\t$coord"
                lappend L_toWriteLoss "$toWrite"
            }
        }
        close $f
        
        # Writing:
        ##########
        puts "\t       ([llength $L_toWriteLoss] SV Loss)"
        set pathogenicLossFile_Tmp "$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.tmp.bed"
        if {$L_toWriteLoss ne {}} {
            WriteTextInFile [join $L_toWriteLoss "\n"] $pathogenicLossFile_Tmp
        }
        
        # Clean:
        ########
        file delete -force $OMIMfileDownloaded
    }
    
    
    return
}




# Return the overlapped SV annotation
proc pathogenicSVannotation {SVchrom SVstart SVend} {
    
    global g_AnnotSV
    global pathogenicText
    
    set pathogenicDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$g_AnnotSV(genomeBuild)"
    
    if {![info exists pathogenicText(DONE)]} {
        # headerOutput:         P_gain_phen  P_gain_hpo  P_gain_source  P_gain_coord
        #                       P_loss_phen  P_loss_hpo  P_loss_source  P_loss_coord
        # + (if user selected): P_ins_phen   P_ins_hpo   P_ins_source   P_ins_coord
        #                       P_inv_phen   P_inv_hpo   P_inv_source   P_inv_coord
        
        set L_pathogenicText(Empty) {}
        foreach svtype {"gain" "loss" "ins" "inv"} {
            # Keep only the user requested columns (defined in the configfile)
            if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^P_${svtype}_"] eq -1} { continue }
            lappend L_pathogenicText(Empty) {*}{"" "" "" ""}
        }
        set pathogenicText(Empty) "[join $L_pathogenicText(Empty) "\t"]"
        
        foreach svtype {"Gain" "Loss" "Ins" "Inv"} {
            
            # Keep only the user requested columns (defined in the configfile)
            if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^P_[string tolower ${svtype}]_"] eq -1} { continue }
            
            # Intersect
            set pathogenicBEDfile [glob -nocomplain "$pathogenicDir/pathogenic_${svtype}_SV_$g_AnnotSV(genomeBuild).sorted.bed"]
            regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.pathogenic-$svtype" tmpFile
            set tmpFile "$g_AnnotSV(outputDir)/[file tail $tmpFile]"
            file delete -force $tmpFile
            # -f 1.0 : the feature in B overlaps at least 100% of the A feature.
            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile} Message]} {
                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile} Message]} {
                    puts "-- pathogenicSVAnnotation, $svtype --"
                    puts "$g_AnnotSV(bedtools) intersect -sorted -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile"
                    puts "$Message"
                    puts "Exit with error"
                    exit 2
                }
            }
            # Parse
            set f [open $tmpFile]
            while {![eof $f]} {
                set L [gets $f]
                if {$L eq ""} {continue}
                set Ls [split $L "\t"]
                
                set pathogenic_phen [lindex $Ls 3]
                set pathogenic_hpo [lindex $Ls 4]
                set pathogenic_source [lindex $Ls 5]
                set pathogenic_coord [lindex $Ls 6]
                
                set SVtoAnn_chrom [lindex $Ls 7]
                set SVtoAnn_start [lindex $Ls 8]
                set SVtoAnn_end   [lindex $Ls 9]
                
                set SVtoAnn "$SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end"
                lappend L_allSVtoAnn $SVtoAnn
                if {$pathogenic_phen ne ""} {
                    lappend L_pathogenic_phen($SVtoAnn,$svtype) $pathogenic_phen
                }
                if {$pathogenic_hpo ne ""} {
                    lappend L_pathogenic_hpo($SVtoAnn,$svtype) {*}[split $pathogenic_hpo " "]
                }
                lappend L_pathogenic_source($SVtoAnn,$svtype) $pathogenic_source
                lappend L_pathogenic_coord($SVtoAnn,$svtype) $pathogenic_coord
            }
            file delete -force $tmpFile
        }
        
        # Loading pathogenic final annotation for each SV
        if {[info exists L_allSVtoAnn]} {
            foreach SVtoAnn [lsort -unique $L_allSVtoAnn] {
                
                foreach svtype {"Gain" "Loss" "Ins" "Inv"} {
                    
                    # Keep only the user requested columns (defined in the configfile)
                    if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^P_[string tolower ${svtype}]_"] eq -1} { continue }
                    
                    if {[info exists L_pathogenic_coord($SVtoAnn,$svtype)]} {
                        if {[info exists L_pathogenic_phen($SVtoAnn,$svtype)]} {
                            lappend L_pathogenicText($SVtoAnn) "[join [lsort -unique $L_pathogenic_phen($SVtoAnn,$svtype)] ";"]"
                        } else {
                            lappend L_pathogenicText($SVtoAnn) ""
                        }
                        if {[info exists L_pathogenic_hpo($SVtoAnn,$svtype)]} {
                            lappend L_pathogenicText($SVtoAnn) "[join [lsort -unique $L_pathogenic_hpo($SVtoAnn,$svtype)] ";"]"
                        } else {
                            lappend L_pathogenicText($SVtoAnn) ""
                        }
                        lappend L_pathogenicText($SVtoAnn) "[join [lsort -unique $L_pathogenic_source($SVtoAnn,$svtype)] ";"]"
                        lappend L_pathogenicText($SVtoAnn) "[join [lsort -unique $L_pathogenic_coord($SVtoAnn,$svtype)] ";"]"
                    } else {
                        lappend L_pathogenicText($SVtoAnn) {*}{"" "" "" ""}
                    }
                }
                set pathogenicText($SVtoAnn) [join $L_pathogenicText($SVtoAnn) "\t"]
            }
        }
        set pathogenicText(DONE) 1
    }
    
    if {[info exist pathogenicText($SVchrom,$SVstart,$SVend)]} {
        return $pathogenicText($SVchrom,$SVstart,$SVend)
    } else {
        return $pathogenicText(Empty)
    }
}




# Return the PARTIALLY overlapped (po) SV annotation
proc poPathogenicSVannotation {SVchrom SVstart SVend} {
    
    global g_AnnotSV
    global poPathogenicText
    
    set pathogenicDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$g_AnnotSV(genomeBuild)"
    
    if {![info exists poPathogenicText(DONE)]} {
        # headerOutput:         po_P_gain_phen  po_P_gain_hpo  po_P_gain_source  po_P_gain_coord  po_P_gain_percent
        #                       po_P_loss_phen  po_P_loss_hpo  po_P_loss_source  po_P_loss_coord  po_P_loss_percent
        
        set L_poPathogenicText(Empty) {}
        foreach svtype {"gain" "loss"} {
            # Keep only the user requested columns (defined in the configfile)
            if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^po_P_${svtype}_"] eq -1} { continue }
            lappend L_poPathogenicText(Empty) {*}{"" "" "" "" ""}
        }
        set poPathogenicText(Empty) "[join $L_poPathogenicText(Empty) "\t"]"
        
        foreach svtype {"Gain" "Loss"} {
            
            # Keep only the user requested columns (defined in the configfile)
            if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^po_P_[string tolower ${svtype}]_"] eq -1} { continue }
            
            # Intersect
            # Header:
            #   chrom  start  end  phenotype  hpo  id  coord
            set pathogenicBEDfile [glob -nocomplain "$pathogenicDir/pathogenic_${svtype}_SV_$g_AnnotSV(genomeBuild).sorted.bed"]
            regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.po_pathogenic-$svtype" tmpFile
            set tmpFile "$g_AnnotSV(outputDir)/[file tail $tmpFile]"
            file delete -force $tmpFile
            # Any overlap
            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -wa -wb > $tmpFile} Message]} {
                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -wa -wb > $tmpFile} Message]} {
                    puts "-- poPathogenicSVAnnotation, $svtype --"
                    puts "$g_AnnotSV(bedtools) intersect -sorted -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -wa -wb > $tmpFile"
                    puts "$Message"
                    puts "Exit with error"
                    exit 2
                }
            }
            # Parse
            set f [open $tmpFile]
            while {![eof $f]} {
                set L [gets $f]
                if {$L eq ""} {continue}
                set Ls [split $L "\t"]
                
                set po_pathogenic_phen [lindex $Ls 3]
                set po_pathogenic_hpo [lindex $Ls 4]
                set po_pathogenic_source [lindex $Ls 5]
                set po_pathogenic_coord [lindex $Ls 6]
                
                set SVtoAnn_chrom [lindex $Ls 7]
                set SVtoAnn_start [lindex $Ls 8]
                set SVtoAnn_end   [lindex $Ls 9]
                
                if {[regexp "\[0-9\]+:(\[0-9\]+)-(\[0-9\]+)" $po_pathogenic_coord match startP endP]} {
                    # Keep only the pathogenic SV > $g_AnnotSV(SVminSize) (50 by default)
                    # WARNING: some dbVar SV have the same start and end locations (e.g. dbVar:nssv17171884)
                    if {[expr {$endP-$startP}] < $g_AnnotSV(SVminSize)} {continue}
                    
                    if {$SVtoAnn_end > $endP} {set po_end $endP} else {set po_end $SVtoAnn_end}
                    if {$SVtoAnn_start > $startP} {set po_start $SVtoAnn_start} else {set po_start $startP}
                    # Some pathogenic variant from dbvar (e.g. nssv17172411) are described with "$endP = $startP" (region size = 1)
                    set length_endP_startP [expr {($endP-$startP)}]
                    if {$length_endP_startP eq 0} {set length_endP_startP 1}
                    set percent [format "%.2f" [expr {($po_end-$po_start)*100.0/$length_endP_startP}]]
                    
                    if {$percent == 100} {continue}
                    
                    set SVtoAnn "$SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end"
                    lappend L_allSVtoAnn $SVtoAnn
                    if {$po_pathogenic_phen ne ""} {
                        lappend L_po_pathogenic_phen($SVtoAnn,$svtype) $po_pathogenic_phen
                    }
                    if {$po_pathogenic_hpo ne ""} {
                        lappend L_po_pathogenic_hpo($SVtoAnn,$svtype) {*}[split $po_pathogenic_hpo " "]
                    }
                    lappend L_po_pathogenic_source($SVtoAnn,$svtype) $po_pathogenic_source
                    lappend L_po_pathogenic_coord($SVtoAnn,$svtype) $po_pathogenic_coord
                    lappend L_po_pathogenic_percent($SVtoAnn,$svtype) $percent
                }
            }
            file delete -force $tmpFile
        }
        
        # Loading pathogenic final annotation for each SV
        if {[info exists L_allSVtoAnn]} {
            foreach SVtoAnn [lsort -unique $L_allSVtoAnn] {
                
                foreach svtype {"Gain" "Loss"} {
                    
                    # Keep only the user requested columns (defined in the configfile)
                    if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^P_[string tolower ${svtype}]_"] eq -1} { continue }
                    
                    if {[info exists L_po_pathogenic_coord($SVtoAnn,$svtype)]} {
                        if {[info exists L_po_pathogenic_phen($SVtoAnn,$svtype)]} {
                            lappend L_poPathogenicText($SVtoAnn) "[join [lsort -unique $L_po_pathogenic_phen($SVtoAnn,$svtype)] ";"]"
                        } else {
                            lappend L_poPathogenicText($SVtoAnn) ""
                        }
                        if {[info exists L_poPathogenic_hpo($SVtoAnn,$svtype)]} {
                            lappend L_poPathogenicText($SVtoAnn) "[join [lsort -unique $L_po_pathogenic_hpo($SVtoAnn,$svtype)] ";"]"
                        } else {
                            lappend L_poPathogenicText($SVtoAnn) ""
                        }
                        # No use of a "lsort -unique" command below, to keep the correspondance between the 3 following features:
                        lappend L_poPathogenicText($SVtoAnn) "[join $L_po_pathogenic_source($SVtoAnn,$svtype) ";"]"
                        lappend L_poPathogenicText($SVtoAnn) "[join $L_po_pathogenic_coord($SVtoAnn,$svtype) ";"]"
                        lappend L_poPathogenicText($SVtoAnn) "[join $L_po_pathogenic_percent($SVtoAnn,$svtype) ";"]"
                    } else {
                        lappend L_poPathogenicText($SVtoAnn) {*}{"" "" "" "" ""}
                    }
                }
                set poPathogenicText($SVtoAnn) [join $L_poPathogenicText($SVtoAnn) "\t"]
            }
        }
        set poPathogenicText(DONE) 1
    }
    if {[info exist poPathogenicText($SVchrom,$SVstart,$SVend)]} {
        return $poPathogenicText($SVchrom,$SVstart,$SVend)
    } else {
        return $poPathogenicText(Empty)
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-phenogenius.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################



## - Check if the PhenoGeniusCli installation is ok
##   Install of PhenoGeniusCli is done here (if needed)
proc checkPhenoGeniusCli {} {
    
    global g_AnnotSV
    
    if {$g_AnnotSV(hpo) eq ""} {
        set g_AnnotSV(PhenoGeniusCli) "0" ;# No HPO terms in INPUT
        return
    }
    set checkResult [catch {exec $g_AnnotSV(bashDir)/checkPhenoGeniusCliInstall.sh} Message]
    if {$checkResult eq 0} {
        puts "\tINFO: AnnotSV takes use of PhenoGenius (Yauy et al., 2023) for the phenotype-driven analysis."
        set g_AnnotSV(PhenoGeniusCli) "1"
    } else {
        puts "\nWARNING: No PhenoGenius installation available for the phenotype-driven analysis."
        puts "\ncf $g_AnnotSV(installDir)/share/python3/phenogeniuscli/*.log\n"
        set g_AnnotSV(PhenoGeniusCli) "0"
    }
    
    return
}



# Creation of the g_PhenoGeniusCli variable:
# g_PhenoGeniusCli($geneName) = PhenoGeniusCli_score\tPhenoGeniusCli_phenotype\tPhenoGeniusCli_specificity
# g_PhenoGeniusCli($NCBIid) = PhenoGeniusCli_score\tPhenoGeniusCli_phenotype\tPhenoGeniusCli_specificity
# default = "-1.0\t\t"
#
# INPUTS:
# L_NCBI_ID
# L_genes
# L_HPO:   e.g. "HP:0001156,HP:0001363,HP:0011304,HP:0010055"
#
# INFO: This proc is run from "AnnotSV-regulatoryelements.tcl"
proc runPhenoGeniusCli {L_Genes L_NCBI_ID L_HPO} {
    
    global g_AnnotSV
    global g_PhenoGeniusCli
    
    puts "...running PhenoGeniusCli for [llength $L_Genes] gene names ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])\n"
    
    set tmpCommandFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_run_phenogeniuscli.tmp.bash"
    set tmpResultsFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_phenogeniuscli_results.tmp.tsv"
    set tmpResultsLogFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_phenogeniuscli_results.tmp.log"
    
    set codeToWrite "#!/bin/bash\n\n"
    append codeToWrite "cd $g_AnnotSV(installDir)/share/python3/phenogeniuscli/PhenoGeniusCli\n"
    append codeToWrite "poetry install\n"
    append codeToWrite "poetry run python3 phenogenius_cli.py --hpo_list $L_HPO --result_file $tmpResultsFile &> $tmpResultsLogFile \n"
    
    WriteTextInFile "$codeToWrite" $tmpCommandFile
    file attributes $tmpCommandFile -permissions 0755
    
    if {[catch {exec $tmpCommandFile} Message] && [regexp -nocase "error" $Message]} {
        puts "$codeToWrite\n"
        puts $Message
    }
    
    if {![file exists $tmpResultsLogFile]} {set g_AnnotSV(PhenoGeniusCli) "0"; return}
    
    foreach L [LinesFromFile $tmpResultsFile] {
        set Ls [split $L "\t"]
        # Header
        # gene_id gene_symbol     rank    score   hpo_implicated  hpo_description_implicated      phenotype_specificity
        if {[regexp "^#gene_id" $L]} {
            set i_ncbi_id "0"
            set i_gene [lsearch -exact $Ls "gene_symbol"]
            set i_score [lsearch -exact $Ls "score"]
            set i_phenotype [lsearch -exact $Ls "hpo_description_implicated"]
            set i_specificity [lsearch -exact $Ls "phenotype_specificity"]
            continue
        }
        # Line example:
        # 5310    PKD1    1       3.2    [{'HP:0000108': 0.7}, {'HP:0005562': 0.5}]    [{'Renal corticomedullary cysts': 0.7}, {'Multiple renal cysts': 0.5}]    A - the reported phenotype is highly specific and relatively unique to the gene (top 40, 50 perc of diagnosis in PhenoGenius cohort).
        set NCBI_ID [lindex $Ls $i_ncbi_id]
        set gene [lindex $Ls $i_gene]
        set score [lindex $Ls $i_score]
        regsub -all "': \[0-9\]\\\.\[0-9\]" [lindex $Ls $i_phenotype] "" phenotype
        regsub -all "\[\\\[\\\]{}'\]" $phenotype "" phenotype
        set specificity [string index [lindex $Ls $i_specificity] 0] ;# A, B, C or D
        if {[lsearch -exact $L_Genes $gene] ne -1} {
            set g_PhenoGeniusCli($gene) "$score\t$phenotype\t$specificity"
        }
        if {[lsearch -exact $L_NCBI_ID $NCBI_ID] ne -1} {
            set g_PhenoGeniusCli($NCBI_ID) "$score\t$phenotype\t$specificity"
        }
    }
    
    file delete -force $tmpCommandFile
    file delete -force $tmpResultsFile
    file delete -force $tmpResultsLogFile
    
    return ""
}


# g_PhenoGeniusCli($geneName) = PhenoGeniusCli_score\tPhenoGeniusCli_phenotype\tPhenoGeniusCli_specificity
# g_PhenoGeniusCli($NCBIid) = PhenoGeniusCli_score\tPhenoGeniusCli_phenotype\tPhenoGeniusCli_specificity
# Return either only the specificity or all the annotation:
# what = "specificity" or "all"
proc PhenoGeniusCliAnnotation {GeneName what} {
    
    global g_PhenoGeniusCli
    
    if {$what eq "all"} {
        # Return all the annotation (PhenoGeniusCli_score\tPhenoGeniusCli_phenotype\tPhenoGeniusCli_specificity) => for gene annotations
        if {[info exists g_PhenoGeniusCli($GeneName)]} {
            return $g_PhenoGeniusCli($GeneName)
        } else {
            set NCBI_ID [searchforNCBIGeneID $GeneName]
            if {[info exists g_PhenoGeniusCli($NCBI_ID)]} {
                return $g_PhenoGeniusCli($NCBI_ID)
            } else {
                return "-1.0\t\t"
            }
        }
    } elseif {$what eq "specificity"} {
        # Return only the specificity (PhenoGeniusCli_specificity) => for regulatory elements annotations
        if {[info exists g_PhenoGeniusCli($GeneName)]} {
            return [lindex [split $g_PhenoGeniusCli($GeneName) "\t"] end]
        } else {
            set NCBI_ID [searchforNCBIGeneID $GeneName]
            if {[info exists g_PhenoGeniusCli($NCBI_ID)]} {
                return [lindex [split $g_PhenoGeniusCli($NCBI_ID) "\t"] end]
            } else {
                return ""
            }
        }
    } else {
        puts "proc PhenoGeniusCliAnnotation: Bad option value for \"what\" ($what)"
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-ranking.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################

proc warningRankingMessage {L_header field} {
    global g_AnnotSV
    
    if {$g_AnnotSV(organism) eq "Human"} {
        puts "WARNING: \"$field\" annotation is missing:"
        puts "******************************************"
        puts "$L_header"
        puts "******************************************"
        puts "         => No ranking provided\n"
    }
    return
}



## Define the position of some columns in an AnnotSV output line (columns requested for the ranking)
proc SVprepareRanking {L_header} {
    
    global g_AnnotSV
    global g_i
    
    
    # Check if we have all the needed information for ranking
    # Before this checking, ranking can not be done
    set g_AnnotSV(ranking) 0
    set Ls [split $L_header "\t"]
    
    # The user is using a VCF SV input file: the svtTSVcol ("SV_type") is necessarily the 6th in the corresponding output annotated file.tsv
    if {[regexp -nocase ".vcf$|.vcf.gz$" $g_AnnotSV(SVinputFile)]} {
        set g_AnnotSV(svtTSVcol) 5
        set g_AnnotSV(svtBEDcol) 3
    }
    
    # "SV_type" is compulsory for the ranking
    if {$g_AnnotSV(svtTSVcol) eq -1} {warningRankingMessage $L_header "SV_type"; return}
    
    # Check if we have all the needed information for ranking
    # unset g_i <=> no SV ranking
    set g_i(gene)     [lsearch -regexp $Ls "Gene_name"];      if {$g_i(gene) == -1} {unset g_i; warningRankingMessage $L_header "Gene_name"; return}
    set g_i(NbGenes)  [lsearch -regexp $Ls "Gene_count"]; if {$g_i(NbGenes) == -1} {unset g_i; warningRankingMessage $L_header "Gene_count"; return}
    set g_i(full)     [lsearch -regexp $Ls "Annotation_mode"];   if {$g_i(full) == -1} {unset g_i; warningRankingMessage $L_header "Annotation_mode"; return}
    
    set g_i(REgene)   [lsearch -regexp $Ls "RE_gene"]; if {$g_i(REgene) == -1} {unset g_i; warningRankingMessage $L_header "RE_gene"; return}
    
    set g_i(Ploss)      [lsearch -regexp $Ls "P_loss_coord"];  if {$g_i(Ploss) == -1} {unset g_i; warningRankingMessage $L_header "P_loss_coord"; return}
    set g_i(Pgain)      [lsearch -regexp $Ls "P_gain_coord"];  if {$g_i(Pgain) == -1} {unset g_i; warningRankingMessage $L_header "P_gain_coord"; return}
    set g_i(Bloss)      [lsearch -regexp $Ls "B_loss_coord"];  if {$g_i(Bloss) == -1} {unset g_i; warningRankingMessage $L_header "B_loss_coord"; return}
    set g_i(Bgain)      [lsearch -regexp $Ls "B_gain_coord"];  if {$g_i(Bgain) == -1} {unset g_i; warningRankingMessage $L_header "B_gain_coord"; return}
    set g_i(Psnvindel)  [lsearch -regexp $Ls "P_snvindel_nb"]; if {$g_i(Psnvindel) == -1} {unset g_i; warningRankingMessage $L_header "P_snvindel_nb"; return}
    
    set g_i(poPloss)    [lsearch -regexp $Ls "po_P_loss_coord"];  if {$g_i(poPloss) == -1} {unset g_i; warningRankingMessage $L_header "po_P_loss_coord"; return}
    set g_i(poPgain)    [lsearch -regexp $Ls "po_P_gain_coord"];  if {$g_i(poPgain) == -1} {unset g_i; warningRankingMessage $L_header "po_P_gain_coord"; return}
    set g_i(poBlossAllG)   [lsearch -regexp $Ls "po_B_loss_allG_coord"];  if {$g_i(poBlossAllG) == -1} {unset g_i; warningRankingMessage $L_header "po_B_loss_allG_coord"; return}
    set g_i(poBlossSomeG)  [lsearch -regexp $Ls "po_B_loss_someG_coord"]; if {$g_i(poBlossSomeG) == -1} {unset g_i; warningRankingMessage $L_header "po_B_loss_someG_coord"; return}
    set g_i(poBgainAllG)   [lsearch -regexp $Ls "po_B_gain_allG_coord"];  if {$g_i(poBgainAllG) == -1} {unset g_i; warningRankingMessage $L_header "po_B_gain_allG_coord"; return}
    set g_i(poBgainSomeG)  [lsearch -regexp $Ls "po_B_gain_someG_coord"]; if {$g_i(poBgainSomeG) == -1} {unset g_i; warningRankingMessage $L_header "po_B_gain_someG_coord"; return}
    
    set g_i(HI) [lsearch -regexp $Ls "HI"];     if {$g_i(HI) == -1} {unset g_i; warningRankingMessage $L_header "HI"; return}
    set g_i(TS) [lsearch -regexp $Ls "TS"];     if {$g_i(TS) == -1} {unset g_i; warningRankingMessage $L_header "TS"; return}
    set g_i(pLI)       [lsearch -regexp $Ls "GnomAD_pLI"];    if {$g_i(pLI) == -1} {unset g_i; warningRankingMessage $L_header "GnomAD_pLI"; return}
    set g_i(loeuf)     [lsearch -regexp $Ls "LOEUF_bin"];     if {$g_i(loeuf) == -1} {unset g_i; warningRankingMessage $L_header "LOEUF_bin"; return}
    set g_i(HIpercent) [lsearch -regexp $Ls "DDD_HI_percent"]; if {$g_i(HIpercent) == -1} {unset g_i; warningRankingMessage $L_header "DDD_HI_percent"; return}
    
    set g_i(exomiser)    [lsearch -regexp $Ls "Exomiser_gene_pheno_score"];
    set g_i(phenogenius) [lsearch -regexp $Ls "PhenoGenius_specificity"];
    
    set g_i(morbid)    [lsearch -regexp $Ls "OMIM_morbid"]; if {$g_i(morbid) == -1} {unset g_i; warningRankingMessage $L_header "OMIM_morbid"; return}
    
    set g_i(location)    [lsearch -regexp $Ls "Location"];               if {$g_i(location) == -1} {unset g_i; warningRankingMessage $L_header "Location"; return}
    set g_i(location2)   [lsearch -regexp $Ls "Location2"];              if {$g_i(location2) == -1} {unset g_i; warningRankingMessage $L_header "Location2"; return}
    set g_i(CDSlength)   [lsearch -regexp $Ls "Overlapped_CDS_length"];  if {$g_i(CDSlength) == -1} {unset g_i; warningRankingMessage $L_header "Overlapped_CDS_length"; return}
    set g_i(CDSpercent)  [lsearch -regexp $Ls "Overlapped_CDS_percent"]; if {$g_i(CDSpercent) == -1} {unset g_i; warningRankingMessage $L_header "Overlapped_CDS_percent"; return}
    set g_i(frameshift)  [lsearch -regexp $Ls "Frameshift"];             if {$g_i(frameshift) == -1} {unset g_i; warningRankingMessage $L_header "Frameshift"; return}
    set g_i(NbExons)     [lsearch -regexp $Ls "Exon_count"];        if {$g_i(NbExons) == -1} {unset g_i; warningRankingMessage $L_header "Exon_count"; return}
    
    # If we have all the needed information, ranking will be done
    set g_AnnotSV(ranking) 1
}



## Rank the pathogenicity of the "DEL" SV following the ACMG classification.
## Creation of 2 global variables:
## - g_rankingScore($AnnotSV_ID)
## - g_rankingExplanations($AnnotSV_ID)
proc SVrankingLoss {L_annotations} {
    
    global g_AnnotSV
    global g_i
    global g_rankingExplanations
    global g_rankingScore
    global g_rankingCriteria
    
    set Ls [split $L_annotations "\t"]
    set AnnotSV_ID "[lindex $Ls 0]"
    set AnnotationMode [lindex $Ls $g_i(full)]
    if {$AnnotationMode eq "full"} {
        
        # In case of SV redundancy in the input file
        if {[info exists g_i(fullDone,$AnnotSV_ID)]} {
            set g_i(splitDone,$AnnotSV_ID) 1
            return
        }
        set g_i(fullDone,$AnnotSV_ID) 1
        
        set NbGenes   [lindex $Ls $g_i(NbGenes)]
        set REgene    [lindex $Ls $g_i(REgene)]
        set Ploss     [lindex $Ls $g_i(Ploss)]
        set poPloss   [lindex $Ls $g_i(poPloss)]
        set Bloss     [lindex $Ls $g_i(Bloss)]
        set poBlossSomeG [lindex $Ls $g_i(poBlossSomeG)]
        set poBlossAllG  [lindex $Ls $g_i(poBlossAllG)]
        
        ## Section 1: Initial assessment of genomic content
        ####################################################################################################################
        if {$REgene eq "" && $NbGenes eq "0"} {
            # 1B. Does NOT contain protein-coding or any known functionally important elements (default -0.60)
            set g_rankingScore($AnnotSV_ID) "$g_rankingCriteria(1B_Loss)"
            set g_rankingExplanations($AnnotSV_ID) "1B (cf Gene_count, RE_gene, $g_rankingCriteria(1B_Loss));"
        } else {
            # 1A. Contains protein-coding or other known functionally important elements (default +0.00)
            set g_rankingScore($AnnotSV_ID) "$g_rankingCriteria(1A_Loss)"
            set g_rankingExplanations($AnnotSV_ID) "1A (cf Gene_count, RE_gene, +$g_rankingCriteria(1A_Loss));"
        }
        
        ## Section 2: Overlap with:
        ## 		- established/predicted haploinsufficiency (HI)
        ## 		- known pathogenic Loss SV
        ## 		- established benign genes/genomic regions
        ##            (Skip to section 3 if your copy-number loss DOES NOT overlap these types of genes/regions)
        #####################################################################################################################
        if {$Ploss ne ""} {
            # 2A. Complete overlap of an established HI gene/genomic region (default +1.00)
            set g_rankingExplanations($AnnotSV_ID,2A) "2A (cf P_loss_source, +$g_rankingCriteria(2A_Loss));"
        } else {
            if {$poPloss ne ""} {
                # 2B. Partial overlap of a known pathogenic Loss SV (default +0.00)
                set g_rankingExplanations($AnnotSV_ID,2B) "2B (cf po_P_loss_source, HI, OMIM_morbid, +$g_rankingCriteria(2B_Loss);"
            }
            if {$Bloss ne ""} {
                # 2F. Completely contained within an established benign CNV region (default -1.00)
                # 4O. Overlap with common population variation (completely contained within a common population CNV) (default -1.00)
                set g_rankingExplanations($AnnotSV_ID,2F) "2F/4O (cf B_loss_source, $g_rankingCriteria(2F-4O_Loss));"
            } elseif {$poBlossSomeG ne ""} {
                # 2G. Overlaps an established benign CNV, but includes additional genomic material (default +0.00)
                set g_rankingExplanations($AnnotSV_ID,2G) "2G (cf po_B_loss_someG_source, +$g_rankingCriteria(2G_Loss));"
            }
        }
        
        ## Section 3: Evaluation of gene number
        ####################################################################################################################
        if {$NbGenes <= 24} {
            # 3A. 0-24 genes (default +0.00)
            if {$NbGenes < 2} {
                set g_rankingExplanations($AnnotSV_ID,3A) "3A ($NbGenes gene, +$g_rankingCriteria(3A_Loss));"
            } else {
                set g_rankingExplanations($AnnotSV_ID,3A) "3A ($NbGenes genes, +$g_rankingCriteria(3A_Loss));"
            }
        } elseif {$NbGenes <= 35} {
            # 3B. 25-34 genes (default +0.45)
            set g_rankingExplanations($AnnotSV_ID,3B) "3B ($NbGenes genes, +$g_rankingCriteria(3B_Loss));"
        } else {
            # 3C. 35+ genes (default +0.90)
            set g_rankingExplanations($AnnotSV_ID,3C) "3C ($NbGenes genes, +$g_rankingCriteria(3C_Loss));"
        }
        
        ## Section 4: Detailed evaluation of genomic content using cases from published literature, public databases, and/or internal lab data
        ##            (Skip to section 5 if either your CNV overlapped with an established HI gene/region in section 2,
        ##             OR there have been no reports associating either the CNV or any genes within the CNV with human phenotypes
        ##             caused by loss of function [LOF] or copy-number loss)
        ####################################################################################################################
        
        if {$poBlossAllG ne ""} {
            # 4O. Overlap with common population variation (completely contained within a common population CNV
            #     OR contains no additional genomic material).(default -1.00)
            if {![info exists g_rankingExplanations($AnnotSV_ID,2F)]} {
                # Does not add a -1 additional score if 2F/4O is completed.
                set g_rankingExplanations($AnnotSV_ID,4O) "4O (cf B_loss_source, po_B_loss_allG_source, $g_rankingCriteria(4O_Loss));"
            }
        }
        
        ## Section 5: Evaluation of inheritance pattern/family history for patient being studied
        ####################################################################################################################
        if {$REgene ne ""} {
            set L_infos [split $REgene "\\\);"]
            set bestEx "0"
            foreach infos $L_infos {
                if {[regexp "(.+?) \\\(.*?EX=(.+)$" $infos match g ex]} {
                    regsub "," $ex "." ex
                    if {$ex > $bestEx} {
                        set bestEx $ex
                        set bestG $g
                    }
                }
            }
            if {$bestEx >= 0.7} {
                # 5H. Inheritance information is unavailable or uninformative. The patient phenotype is highly specific and consistent with what has been described in similar cases (default +0.30)
                lappend g_rankingExplanations($AnnotSV_ID,5H) "RE:$bestG"
            } elseif {$bestEx >= 0.5} {
                # 5G. Inheritance information is unavailable or uninformative. The patient phenotype is nonspecific, but is consistent with what has been described in similar cases (default +0.10)
                lappend g_rankingExplanations($AnnotSV_ID,5G) "RE:$bestG"
            }
        }
        
    } else {
        ## Split lines
        
        # In case of SV redundancy in the input file
        if {[info exists g_i(splitDone,$AnnotSV_ID)]} {return}
        
        ## Section 2: Overlap with:
        ##              - established/predicted haploinsufficiency (HI)
        ##              - known pathogenic Loss SV
        ##              - established benign genes/genomic regions
        ##            (Skip to section 3 if your copy-number loss DOES NOT overlap these types of genes/regions)
        #####################################################################################################################
        set HI     [lindex $Ls $g_i(HI)]
        set morbid [lindex $Ls $g_i(morbid)]
        set gene   [lindex $Ls $g_i(gene)]
        set exomiser    [lindex $Ls $g_i(exomiser)]
        regsub "," $exomiser "." exomiser
        set phenogenius [lindex $Ls $g_i(phenogenius)]
        if {$HI eq "3" || $morbid eq "yes"} {
            set location   [lindex $Ls $g_i(location)]
            set location2  [lindex $Ls $g_i(location2)]
            set CDSlength  [lindex $Ls $g_i(CDSlength)]
            set CDSpercent [lindex $Ls $g_i(CDSpercent)]
            regsub "," $CDSpercent "." CDSpercent
            set Psnvindel  [lindex $Ls $g_i(Psnvindel)]
            set NbExons    [lindex $Ls $g_i(NbExons)]
            
            if {[regexp "^5'UTR" $location2] && ![regexp "3'UTR$" $location2]} {
                # 2C. Partial overlap with the 5’ end of an established HI gene (3’ end of the gene not involved)…
                if {$CDSlength ne "0"} {
                    # 2C-1. …and coding sequence is involved (default +0.90)
                    lappend g_rankingExplanations($AnnotSV_ID,2C-1) "$gene"
                } else {
                    # 2C-2. …and only the 5’ UTR is involved (default +0.00)
                    lappend g_rankingExplanations($AnnotSV_ID,2C-2) "$gene"
                }
            } elseif {[regexp "3'UTR$" $location2] && ![regexp "^5'UTR" $location2]} {
                # 2D. Partial overlap with the 3’ end of an established HI gene (5’ end of the gene not involved)…
                if {$CDSlength eq "0"} {
                    # 2D-1. …and only the 3’ untranslated region is involved (default +0.00)
                    lappend g_rankingExplanations($AnnotSV_ID,2D-1) "$gene"
                } elseif {$location eq "exon${NbExons}-txEnd" && $Psnvindel ne ""} {
                    # 2D-2. …and only the last exon is involved. Other established pathogenic snv/indel have been reported in the SV (default +0.90)
                    lappend g_rankingExplanations($AnnotSV_ID,2D-2) "$gene"
                } elseif {$location eq "exon${NbExons}-txEnd"} {
                    # 2D-3. …and only the last exon is involved. No other established pathogenic snv/indel have been reported in the SV (default +0.45)
                    lappend g_rankingExplanations($AnnotSV_ID,2D-3) "$gene"
                } elseif {$location ne "exon${NbExons}-txEnd" && $location ne "intron[expr {${NbExons}-1}]-txEnd"} {
                    # 2D-4. …and it includes other exons in addition to the last exon. Nonsense-mediated decay is expected to occur (default +0.90)
                    lappend g_rankingExplanations($AnnotSV_ID,2D-4) "$gene"
                }
            } elseif {![regexp "txStart|txEnd" $location]} {
                # 2E. Both breakpoints are within the same gene (intragenic CNV; gene-level sequence variant) AND...
                set frameshift [lindex $Ls $g_i(frameshift)]
                # At least 1 exon overlapped ?? <=> (exon'i' in location) OR (location eq intron'i'-intron'j') BUT NOT (location eq intron'i'-intron'i')
                set exonOverlapped 0
                if {[regexp "exon" $location]} {
                    set exonOverlapped 1
                } elseif {[regsub -all "intron" $location "" tutu]} {
                    if {[string index $tutu 0] ne [string index $tutu 2]} {
                        set exonOverlapped 1
                    }
                }
                if {$frameshift eq "yes"} {
                    # 2E-1. ...frameshift (default +0.90)
                    lappend g_rankingExplanations($AnnotSV_ID,2E-1) "$gene"
                } elseif {$exonOverlapped && $Psnvindel ne "" && $CDSpercent >= 10} {
                    # 2E-2. ...exon(s) overlapped AND pathogenic snv/indel overlapped AND SV removes > 10% of protein (default +0.45)
                    lappend g_rankingExplanations($AnnotSV_ID,2E-2) "$gene"
                } elseif {$exonOverlapped && $Psnvindel ne "" && $CDSpercent < 10} {
                    # 2E-3. ...exon(s) overlapped AND pathogenic snv/indel overlapped AND SV removes < 10% of protein (default +0.30)
                    lappend g_rankingExplanations($AnnotSV_ID,2E-3) "$gene"
                } elseif {$exonOverlapped && $Psnvindel eq "" && $CDSpercent > 10} {
                    # 2E-4. ...>=1 exon deleted AND no established pathogenic snv/indel have been reported in the observed CNV AND variant removes > 10% of protein (default +0.20)
                    lappend g_rankingExplanations($AnnotSV_ID,2E-4) "$gene"
                }
            }
        }
        
        # Evaluation of the 2H criteria
        set pLI        [lindex $Ls $g_i(pLI)]
        regsub -all "," $pLI "." pLI
        set loeuf      [lindex $Ls $g_i(loeuf)]
        regsub -all "," $loeuf "." loeuf
        set HIpercent  [lindex $Ls $g_i(HIpercent)]
        regsub -all "," $HIpercent "." HIpercent
        set i 0
        if {$pLI >= 0.9} {incr i}
        if {$HIpercent <= 10} {incr i}
        
        if {$i >= 2} {
            # 2H. Two or more HI predictors suggest that AT LEAST ONE gene in the interval is HI (default +0.15)
            lappend g_rankingExplanations($AnnotSV_ID,2H) "$gene"
        }
        
        ## Section 5: Evaluation of inheritance pattern/family history for patient being studied
        ####################################################################################################################
        if {$exomiser >= 0.7 || $phenogenius eq "A"} {
            # 5H. Inheritance information is unavailable or uninformative. The patient phenotype is highly specific and consistent with what has been described in similar cases (default +0.30)
            lappend g_rankingExplanations($AnnotSV_ID,5H) "$gene"
        } elseif {$exomiser >= 0.5 || $phenogenius eq "B"} {
            # 5G. Inheritance information is unavailable or uninformative. The patient phenotype is nonspecific, but is consistent with what has been described in similar cases (default +0.10)
            lappend g_rankingExplanations($AnnotSV_ID,5G) "$gene"
        }
    }
    
    return
}

# Add the higher score of each section
# (WARNING: Evaluation of the different "if" statements should be done from the highest score to the lowest score)
proc achieveSVrankingLoss {AnnotSV_ID} {
    
    global g_rankingScore
    global g_rankingExplanations
    global g_achieve
    global g_rankingCriteria
    
    # In case of SV redundancy in the input file
    if {[info exists g_achieve($AnnotSV_ID)]} {return}
    set g_achieve($AnnotSV_ID) ""
    
    if {![info exists g_rankingScore($AnnotSV_ID)]} {set g_rankingScore($AnnotSV_ID) ""; return}
    
    ## Section 2: Overlap with established/predicted haploinsufficiency (HI) or established benign genes/genomic regions
    ##            (Skip to section 3 if your copy-number loss DOES NOT overlap these types of genes/regions)
    #####################################################################################################################
    
    # Add the higher score of the section 2:
    # - Evaluate scores from the higher (positive value) to the lower (negative value); stop the evaluation at the first match (only the higher match is reported)
    #   (the "0" scores are evaluated in a second time)
    
    # 4O: Skip to section 5 if either your CNV overlapped with a pathogenic Loss SV in section 2
    
    if {[info exists g_rankingExplanations($AnnotSV_ID,2A)]} {
        # 2A
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2A_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,2A)"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2C-1)]} {
        # 2C-1
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2C-1_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "2C-1 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2C-1)] "/"], +$g_rankingCriteria(2C-1_Loss));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2D-2)]} {
        # 2D-2
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2D-2_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "2D-2 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2D-2)] "/"], +$g_rankingCriteria(2D-2_Loss));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2D-4)]} {
        # 2D-4
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2D-4_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "2D-4 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2D-4)] "/"], +$g_rankingCriteria(2D-4_Loss));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2E-1)]} {
        # 2E-1
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2E-1_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "2E-1 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2E-1)] "/"], +$g_rankingCriteria(2E-1_Loss));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2E-2)]} {
        # 2E-2
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2E-2_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "2E-2 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2E-2)] "/"], +$g_rankingCriteria(2E-2_Loss));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2D-3)]} {
        # 2D-3
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2D-3_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "2D-3 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2D-3)] "/"], +$g_rankingCriteria(2D-3_Loss));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2E-3)]} {
        # 2E-3
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2E-3_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "2E-3 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2E-3)] "/"], +$g_rankingCriteria(2E-3_Loss));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2E-4)]} {
        # 2E-4
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2E-4_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "2E-4 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2E-4)] "/"]), +$g_rankingCriteria(2E-4_Loss);"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2H)]} {
        # 2H
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2H_Loss)}]
        #set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingScore($AnnotSV_ID,maxLoeuf)}]
        append g_rankingExplanations($AnnotSV_ID) "2H ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2H)] "/"], +$g_rankingCriteria(2H_Loss));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2F)]} {
        # 2F
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2F-4O_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,2F)"
    }
    
    # - Evaluate the "0" scores; all the match are reported.
    if {[info exists g_rankingExplanations($AnnotSV_ID,2B)] && ![regexp "2A|2C|2D|2E" $g_rankingExplanations($AnnotSV_ID)]} {
        # 2B
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,2B)"
    }
    if {[info exists g_rankingExplanations($AnnotSV_ID,2C-2)]} {
        # 2C-2
        append g_rankingExplanations($AnnotSV_ID) "2C-2 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2C-2)] "/"],+$g_rankingCriteria(2C-2_Loss));"
    }
    if {[info exists g_rankingExplanations($AnnotSV_ID,2D-1)]} {
        # 2D-1
        append g_rankingExplanations($AnnotSV_ID) "2D-1 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2D-1)] "/"],+$g_rankingCriteria(2D-1_Loss));"
    }
    if {[info exists g_rankingExplanations($AnnotSV_ID,2G)]} {
        # 2G
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,2G)"
    }
    
    ## Section 3: Evaluation of gene number
    ####################################################################################################################
    
    # Add the higher score of the section 3
    if {[info exists g_rankingExplanations($AnnotSV_ID,3C)]} {
        # 3C
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3C_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,3C)"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,3B)]} {
        # 3B
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3B_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,3B)"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,3A)]} {
        # 3A
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3A_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,3A)"
    }
    
    ## Section 4: Detailed evaluation of genomic content using cases from published literature, public databases, and/or internal lab data
    ##            (Skip to section 5 if either your CNV overlapped with an established HI gene/region in section 2,
    ##             OR there have been no reports associating either the CNV or any genes within the CNV with human phenotypes
    ##             caused by loss of function [LOF] or copy-number loss)
    ####################################################################################################################
    
    # Add the higher score of the section 4 (only if no positive score has been attributed in section 2)
    if {[info exists g_rankingExplanations($AnnotSV_ID,4O)]} {
        # 4O
        if {![info exists g_rankingExplanations($AnnotSV_ID,2A)] && \
            ![info exists g_rankingExplanations($AnnotSV_ID,2F)] && \
            ![info exists g_rankingExplanations($AnnotSV_ID,2C-1)] && \
            ![info exists g_rankingExplanations($AnnotSV_ID,2D-2)] && \
            ![info exists g_rankingExplanations($AnnotSV_ID,2D-3)] && \
            ![info exists g_rankingExplanations($AnnotSV_ID,2D-4)] && \
            ![info exists g_rankingExplanations($AnnotSV_ID,2E-1)] && \
            ![info exists g_rankingExplanations($AnnotSV_ID,2E-2)] && \
            ![info exists g_rankingExplanations($AnnotSV_ID,2E-3)] && \
            ![info exists g_rankingExplanations($AnnotSV_ID,2E-4)] && \
            ![info exists g_rankingExplanations($AnnotSV_ID,2EH)]} {
            set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(4O_Loss)}]
            append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,4O)"
        }
    }
    
    ## Section 5: Evaluation of inheritance pattern/family history for patient being studied
    ####################################################################################################################
    
    # Add the higher score of the section 5
    if {[info exists g_rankingExplanations($AnnotSV_ID,5H)]} {
        # 5H
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(5H_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "5H ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,5H)] "/"], $g_rankingCriteria(5H_Loss))"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,5G)]} {
        # 5G
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(5G_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "5G ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,5G)] "/"], +$g_rankingCriteria(5G_Loss))"
    } else {
        # 5F
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(5F_Loss)}]
        append g_rankingExplanations($AnnotSV_ID) "5F (+$g_rankingCriteria(5F_Loss))"
    }
    
    return
}


## Rank the pathogenicity of the "DUP" SV following the ACMG classification.
## Creation of 2 global variables:
## - g_rankingScore($AnnotSV_ID)
## - g_rankingExplanations($AnnotSV_ID)
proc SVrankingGain {L_annotations} {
    
    global g_AnnotSV
    global g_i
    global g_rankingExplanations
    global g_rankingScore
    global g_rankingCriteria
    
    
    set Ls [split $L_annotations "\t"]
    set AnnotSV_ID "[lindex $Ls 0]"
    
    set AnnotationMode [lindex $Ls $g_i(full)]
    
    if {$AnnotationMode eq "full"} {
        
        set NbGenes   [lindex $Ls $g_i(NbGenes)]
        set REgene    [lindex $Ls $g_i(REgene)]
        set Pgain     [lindex $Ls $g_i(Pgain)]
        set Bgain     [lindex $Ls $g_i(Bgain)]
        
        set poPgain   [lindex $Ls $g_i(poPgain)]
        set poBgainSomeG [lindex $Ls $g_i(poBgainSomeG)]
        set poBgainAllG  [lindex $Ls $g_i(poBgainAllG)]
        
        
        ## Section 1: Initial assessment of genomic content
        ####################################################################################################################
        if {$REgene eq "" && $NbGenes eq "0"} {
            # 1B. Does NOT contain protein-coding or any known functionally important elements (default -0.60)
            set g_rankingScore($AnnotSV_ID) "$g_rankingCriteria(1B_Gain)"
            set g_rankingExplanations($AnnotSV_ID) "1B (cf Gene_count, RE_gene, $g_rankingCriteria(1B_Gain));"
        } else {
            # 1A. Contains protein-coding or other known functionally important elements (default +0.00)
            set g_rankingScore($AnnotSV_ID) "$g_rankingCriteria(1A_Gain)"
            set g_rankingExplanations($AnnotSV_ID) "1A (cf Gene_count, RE_gene, +$g_rankingCriteria(1A_Gain));"
        }
        
        ## Section 2: Overlap with established triplosensitive (TS), haploinsufficient (HI), or benign genes or genomic regions
        ##            (Skip to section 3 if the copy-number gain DOES NOT overlap these types of genes/regions)
        #####################################################################################################################
        if {$Pgain ne ""} {
            # 2A. Complete overlap; the TS gene or minimal critical region is fully contained within the observed copy-number gain (default +1.00)
            set g_rankingExplanations($AnnotSV_ID,2A) "2A (cf P_gain_source, +1.00);"
        } else {
            if {$poPgain ne ""} {
                # 2B. Partial overlap of a known pathogenic Gain SV (default +0.00)
                set g_rankingExplanations($AnnotSV_ID,2B) "2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);"
            }
            
            if {$poBgainAllG ne ""} {
                #2C. Identical in gene content to the established benign copy-number gain (default -1.00)
                set g_rankingExplanations($AnnotSV_ID,2C) "2C (cf po_B_gain_allG_source, $g_rankingCriteria(2C_Gain));"
            } elseif {$Bgain ne ""} {
                # 2DE. Smaller than established benign copy-number gain
                set g_rankingExplanations($AnnotSV_ID,2DE) ""
            } elseif {$poBgainAllG ne ""} {
                # 2F. Larger than known benign copy-number gain, does not include additional protein-coding genes (default -1.00)
                # => non protein coding gene list to code to differentiate of 2C
                set g_rankingExplanations($AnnotSV_ID,2F) "2F (cf po_B_gain_allG_source, $g_rankingCriteria(2F_Gain));"
            } elseif {$poBgainSomeG ne ""} {
                # 2G. Overlaps a benign copy-number gain but includes additional genomic material (default +0.00)
                set g_rankingExplanations($AnnotSV_ID,2G) "2G (cf po_B_gain_someG_source, +$g_rankingCriteria(2G_Gain));"
            }
        }
        
        ## Section 3: Evaluation of gene number
        ####################################################################################################################
        if {$NbGenes <= 34} {
            # 3A. 0-34 genes (default +0.00)
            if {$NbGenes < 2} {
                set g_rankingExplanations($AnnotSV_ID,3A) "3A ($NbGenes gene, +$g_rankingCriteria(3A_Gain));"
            } else {
                set g_rankingExplanations($AnnotSV_ID,3A) "3A ($NbGenes genes, +$g_rankingCriteria(3A_Gain));"
            }
        } elseif {$NbGenes <= 49} {
            # 3B. 35-49 genes (default +0.45)
            set g_rankingExplanations($AnnotSV_ID,3B) "3B ($NbGenes genes, +$g_rankingCriteria(3B_Gain));"
        } else {
            # 3C. 50 or more genes (default +0.90)
            set g_rankingExplanations($AnnotSV_ID,3C) "3C ($NbGenes genes, +$g_rankingCriteria(3C_Gain));"
        }
        
        ##  Section 4: Detailed evaluation of genomic content using cases from published literature, public databases, and/or internal lab data
        ##             (Note: If there have been no reports associating either the copy-number gain or any of the genes therein with human phenotypes caused by triplosensitivity, skip to section 5)
        ####################################################################################################################
        if {$poBgainAllG ne "" || $Bgain ne "" || $poBgainSomeG ne ""} {
            # 4O. Overlap with common population variation.
            set g_rankingExplanations($AnnotSV_ID,4O) "4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +$g_rankingCriteria(4O_Gain));"
        }
        
        
        
        ## Section 5: Evaluation of inheritance pattern/family history for patient being studied
        ####################################################################################################################
        if {$REgene ne ""} {
            set L_infos [split $REgene "\\\);"]
            set bestEx "0"
            foreach infos $L_infos {
                if {[regexp "(.+?) \\\(.*?EX=(.+)$" $infos match g ex]} {
                    regsub "," $ex "." ex
                    if {$ex > $bestEx} {
                        set bestEx $ex
                        set bestG $g
                    }
                }
            }
            if {$bestEx >= 0.7} {
                # 5H. Inheritance information is unavailable or uninformative. The patient phenotype is highly specific and consistent with what has been described in similar cases (default +0.15)
                lappend g_rankingExplanations($AnnotSV_ID,5H) "RE:$bestG"
            } elseif {$bestEx >= 0.5} {
                # 5G. Inheritance information is unavailable or uninformative. The patient phenotype is nonspecific, but is consistent with what has been described in similar cases (default +0.10)
                lappend g_rankingExplanations($AnnotSV_ID,5G) "RE:$bestG"
            }
        }
        
    } else {
        # Split lines
        
        ## Section 2: Overlap with established triplosensitive (TS), haploinsufficient (HI), or benign genes or genomic regions
        ##            (Skip to section 3 if the copy-number gain DOES NOT overlap these types of genes/regions)
        #####################################################################################################################
        set HI          [lindex $Ls $g_i(HI)]
        set morbid      [lindex $Ls $g_i(morbid)]
        set gene        [lindex $Ls $g_i(gene)]
        set location    [lindex $Ls $g_i(location)]
        set exomiser    [lindex $Ls $g_i(exomiser)]
        regsub "," $exomiser "." exomiser
        set phenogenius [lindex $Ls $g_i(phenogenius)]
        
        if {[info exists g_rankingExplanations($AnnotSV_ID,2DE)]} {
            if {![regexp "exon|intron" $location]} {
                # 2D. Smaller than established benign copy-number gain, breakpoint(s) does not interrupt protein-coding genes (default -1.00)
                set g_rankingExplanations($AnnotSV_ID,2D) "2D (cf B_gain_source, $g_rankingCriteria(2D_Gain));"
            } else {
                # 2E. Smaller than established benign copy-number gain, breakpoint(s) potentially interrupts protein-coding gene (default +0.00)
                set g_rankingExplanations($AnnotSV_ID,2E) "2E (cf B_gain_source, +$g_rankingCriteria(2E_Gain));"
            }
        }
        
        if {$HI eq "3" || $morbid eq "yes"} {
            set frameshift [lindex $Ls $g_i(frameshift)]
            
            if {![regexp "^txStart" $location] && ![regexp "txEnd$" $location]} {
                # Both breakpoints are within the same HI gene / morbid gene (gene-level sequence variant, possibly resulting in loss of function [LOF]) AND...
                if {$frameshift eq "yes"} {
                    # 2I-1. ...disrupts the reading frame (+0.45)
                    lappend g_rankingExplanations($AnnotSV_ID,2I-1) "$gene"
                } elseif {$exomiser >= 0.7 || $phenogenius eq "A"} {
                    # 2I-2. ...patient phenotype is highly specific and consistent with what has been described for this HI gene / morbid gene (PhenoGenius_specificity == "A" OR Exomiser_gene_pheno_score >= 0.7) (default +0.45)
                    lappend g_rankingExplanations($AnnotSV_ID,2I-2) "$gene"
                } else {
                    # 2I-3. ...patient phenotype is either inconsistent with what has been described for this HI gene / morbid gene (Exomiser_gene_pheno_score < 0.7) OR unknown (default +0.00)
                    lappend g_rankingExplanations($AnnotSV_ID,2I-3) "$gene"
                }
            } elseif {![regexp "^txStart" $location] || ![regexp "txEnd$" $location]} {
                # One breakpoint is within an established HI gene
                if {$exomiser >= 0.7 || $phenogenius eq "A"} {
                    # 2K. One breakpoint is within an established HI gene / morbid gene, patient’s phenotype is highly specific and consistent with what is expected
                    #     for LOF of that gene (PhenoGenius_specificity == "A" OR Exomiser_gene_pheno_score >= 0.7) (default +0.45)
                    lappend g_rankingExplanations($AnnotSV_ID,2K) "$gene"
                } else {
                    # 2J. One breakpoint is within an established HI gene / morbid gene, patient’s phenotype is either inconsistent with what is expected for LOF of that gene OR unknown (default +0.00)
                    lappend g_rankingExplanations($AnnotSV_ID,2J) "$gene"
                }
            } elseif {$location eq "txStart-txEnd"} {
                # 2H. HI gene / morbid gene fully contained within observed copy-number gain AND...
                if {$exomiser >= 0.7 || $phenogenius eq "A"} {
                    # 2H-1. ...patient’s phenotype is highly specific and consistent with what is expected for LOF of that gene (PhenoGenius_specificity == "A" OR Exomiser_gene_pheno_score >= 0.7) (default +0.45)
                    lappend g_rankingExplanations($AnnotSV_ID,2H-1) "$gene"
                } else {
                    # 2H-2. ...patient's phenotype is nonspecific with what is expected for LOF of that gene (Exomiser_gene_pheno_score < 0.7) (default +0.00)
                    lappend g_rankingExplanations($AnnotSV_ID,2H-2) "$gene"
                }
            }
        } elseif {![regexp "^txStart" $location] || ![regexp "txEnd$" $location]} {
            # 2L. One or both breakpoints are within gene(s) of no established clinical significance (default +0.00)
            lappend g_rankingExplanations($AnnotSV_ID,2L) "$gene"
        }
        
        ## Section 5: Evaluation of inheritance pattern/family history for patient being studied
        ####################################################################################################################
        if {$exomiser >= 0.7 || $phenogenius eq "A"} {
            # 5H. Inheritance information is unavailable or uninformative. The patient phenotype is highly specific and consistent with what has been described in similar cases (default +0.15)
            lappend g_rankingExplanations($AnnotSV_ID,5H) "$gene"
        } elseif {$exomiser >= 0.5  || $phenogenius eq "B"} {
            # 5G. Inheritance information is unavailable or uninformative. The patient phenotype is nonspecific, but is consistent with what has been described in similar cases (default +0.10)
            lappend g_rankingExplanations($AnnotSV_ID,5G) "$gene"
        }
    }
    
    return
}


# Add the higher score of each section
# (WARNING: Evaluation of the different "if" statements should be done from the highest score to the lowest score)
proc achieveSVrankingGain {AnnotSV_ID} {
    
    global g_rankingScore
    global g_rankingExplanations
    global g_rankingCriteria
    
    if {![info exists g_rankingScore($AnnotSV_ID)]} {set g_rankingScore($AnnotSV_ID) ""; return}
    
    ## Section 2: Overlap with established triplosensitive (TS), haploinsufficient (HI), or benign genes or genomic regions
    ##            (Skip to section 3 if the copy-number gain DOES NOT overlap these types of genes/regions)
    #####################################################################################################################
    
    # - Evaluate scores from the higher (positive value) to the lower (negative value); stop the evaluation at the first match (only the higher match is reported)
    #   (the "0" scores are evaluated in a second time)
    if {[info exists g_rankingExplanations($AnnotSV_ID,2A)]} {
        # 2A
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2A_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,2A)"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2I-1)]} {
        # 2I-1
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2I-1_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "2I-1 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2I-1)] "/"], +$g_rankingCriteria(2I-1_Gain));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2I-2)]} {
        # 2I-2
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2I-2_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "2I-2 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2I-2)] "/"], +$g_rankingCriteria(2I-2_Gain));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2K)]} {
        # 2K
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2K_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "2K ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2K)] "/"], +$g_rankingCriteria(2K_Gain));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2H-1)]} {
        # 2H-1
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2H-1_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "2H-1 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2H-1)] "/"], +$g_rankingCriteria(2H-1_Gain));"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2C)]} {
        # 2C
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2C_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,2C)"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2D)]} {
        # 2D
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2D_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,2D)"
    }  elseif {[info exists g_rankingExplanations($AnnotSV_ID,2F)]} {
        # 2F
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2F_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,2F)"
    }
    
    
    # - Evaluate the "0" scores; all the match are reported.
    if {[info exists g_rankingExplanations($AnnotSV_ID,2B)]} {
        # 2B
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2B_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,2B)"
    }
    if {[info exists g_rankingExplanations($AnnotSV_ID,2E)]} {
        # 2E
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2E_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,2E)"
    }
    if {[info exists g_rankingExplanations($AnnotSV_ID,2G)]} {
        # 2G
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2G_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,2G)"
    }
    if {[info exists g_rankingExplanations($AnnotSV_ID,2H-2)]} {
        # 2H-2
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2H-2_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "2H-2 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2H-2)] "/"], +$g_rankingCriteria(2H-2_Gain));"
    }
    if {[info exists g_rankingExplanations($AnnotSV_ID,2I-3)]} {
        # 2I-3
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2I-3_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "2I-3 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2I-3)] "/"], +$g_rankingCriteria(2I-3_Gain));"
    }
    if {[info exists g_rankingExplanations($AnnotSV_ID,2J)]} {
        # 2J
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2J_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "2J ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2J)] "/"], +$g_rankingCriteria(2J_Gain));"
    }
    if {[info exists g_rankingExplanations($AnnotSV_ID,2L)]} {
        # 2L
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2L_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "2L ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2L)] "/"], +$g_rankingCriteria(2L_Gain));"
    }
    
    
    ## Section 3: Evaluation of gene number
    ####################################################################################################################
    
    # Add the higher score of the section 3
    if {[info exists g_rankingExplanations($AnnotSV_ID,3C)]} {
        # 3C
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3C_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,3C)"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,3B)]} {
        # 3B
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3B_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,3B)"
    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,3A)]} {
        # 3A
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3A_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,3A)"
    }
    
    ## Section 4: Detailed evaluation of genomic content using cases from published literature, public databases, and/or internal lab data
    ##            (Note: If there have been no reports associating either the copy-number gain or any of the genes therein with human phenotypes caused by triplosensitivity, skip to section 5)
    ####################################################################################################################
    
    # Add the higher score of the section 4
    if {[info exists g_rankingExplanations($AnnotSV_ID,4O)]} {
        # 4O
        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(4O_Gain)}]
        append g_rankingExplanations($AnnotSV_ID) "$g_rankingExplanations($AnnotSV_ID,4O)"
    }
    
    
    ## Section 5: Evaluation of inheritance patterns/family history for patient being studied
    ####################################################################################################################
    
    # Add the higher score of the section 5
    if {![info exists g_rankingExplanations($AnnotSV_ID,2K)]} {
        if {[info exists g_rankingExplanations($AnnotSV_ID,5H)]} {
            # 5H
            set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+0.15}]
            append g_rankingExplanations($AnnotSV_ID) "5H ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,5H)] "/"], +$g_rankingCriteria(5H_Gain))"
        } elseif {[info exists g_rankingExplanations($AnnotSV_ID,5G)]} {
            # 5G
            set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(5G_Gain)}]
            append g_rankingExplanations($AnnotSV_ID) "5G ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,5G)] "/"], +$g_rankingCriteria(5G_Gain))"
        } else {
            # 5F
            set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(5F_Gain)}]
            append g_rankingExplanations($AnnotSV_ID) "5F (+$g_rankingCriteria(5F_Gain))"
        }
    }
    
    return
}




## Rank the pathogenicity of the "INS" SV.
## Creation of 2 global variables:
## - g_rankingScore($AnnotSV_ID)
## - g_rankingExplanations($AnnotSV_ID)
proc SVrankingINS {L_annotations} {
    
    global g_AnnotSV
    global g_i
    global g_rankingExplanations
    global g_rankingScore
    global g_rankingCriteria
    
    set Ls [split $L_annotations "\t"]
    set AnnotSV_ID "[lindex $Ls 0]"
    
    set g_rankingScore($AnnotSV_ID) ""
    set g_rankingExplanations($AnnotSV_ID) ""
    
    return
}


## Rank the pathogenicity of the "INV" SV.
## Creation of 2 global variables:
## - g_rankingScore($AnnotSV_ID)
## - g_rankingExplanations($AnnotSV_ID)
proc SVrankingINV {L_annotations} {
    
    global g_AnnotSV
    global g_i
    global g_rankingExplanations
    global g_rankingScore
    global g_rankingCriteria
    
    set Ls [split $L_annotations "\t"]
    set AnnotSV_ID "[lindex $Ls 0]"
    
    set g_rankingScore($AnnotSV_ID) ""
    set g_rankingExplanations($AnnotSV_ID) ""
    
    return
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-regulatoryelements.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################

# Is it a RefSeq gene name?
proc isARefSeqGeneName {geneName} {
    
    global g_AnnotSV
    global g_exist
    
    if {![info exists g_exist(RefSeq)]} {
        set g_exist(RefSeq) "1"
        
        set genesDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)"
        foreach L [LinesFromFile "$genesDir/genes.RefSeq.sorted.bed"] {
            set Ls [split $L "\t"]
            set g_exist(RefSeq,[lindex $Ls 4]) 1
        }
    }
    
    if {[info exists g_exist(RefSeq,$geneName)]} {set test 1} else {set test 0}
    
    return $test
}

# Is it an ENSEMBL gene name?
proc isAnENSEMBLgeneName {geneName} {
    
    global g_AnnotSV
    global g_exist
    
    if {![info exists g_exist(ENSEMBL)]} {
        set g_exist(ENSEMBL) "1"
        
        set genesDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)"
        set ENSEMBLfile "$genesDir/genes.ENSEMBL.sorted.bed"
        if {[file exists $ENSEMBLfile]} {
            foreach L [LinesFromFile $ENSEMBLfile] {
                set Ls [split $L "\t"]
                set g_exist(ENSEMBL,[lindex $Ls 4]) 1
            }
        }
    }
    
    if {[info exists g_exist(ENSEMBL,$geneName)]} {set test 1} else {set test 0}
    
    return $test
}



## - Check and create if necessary the "promoter_XXXbp_*_GRCh*.sorted.bed" file.
proc checkPromoterFile {} {
    
    global g_AnnotSV
    
    ## Check if the promoters file has been formatted
    #################################################
    set g_AnnotSV(promAnn) 0
    set genesDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)"
    set regElementsDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/RegulatoryElements/$g_AnnotSV(genomeBuild)"
    
    if {![file exists $regElementsDir]} {file mkdir $regElementsDir}
    
    set genesFileFormatted "$genesDir/genes.$g_AnnotSV(tx).sorted.bed"
    set promoterFormatted "$regElementsDir/promoter_$g_AnnotSV(promoterSize)bp_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"
    
    if {![file exists $promoterFormatted]} {
        
        # Creation of the promoterFormatted
        puts "\t...$g_AnnotSV(tx) promoters configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        puts "\t   (-promoterSize = $g_AnnotSV(promoterSize))\n"
        foreach L [LinesFromFile $genesFileFormatted] {
            # Line example:
            # 1       17368   17436   -       MIR6859-2       NR_107062       17436   17436   17368,  17436,
            set Ls [split $L "\t"]
            set chrom [lindex $Ls 0]
            set strand [lindex $L 3]
            if {$strand eq "+"} {
                set promRight [lindex $Ls 1]
                set promLeft [expr $promRight-$g_AnnotSV(promoterSize)]
                if {$promLeft < 0} {set promLeft 0}
            } elseif {$strand eq "-"} {
                set promLeft [lindex $Ls 2]
                set promRight [expr $promLeft+$g_AnnotSV(promoterSize)]
            } else {
                puts "strand eq \"$strand\" -- $L"
            }
            lappend genesProm($chrom\t$promLeft\t$promRight) [lindex $Ls 4]
            lappend L_prom($chrom) "$promLeft\t$promRight"
        }
        set L_allProm {}
        foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
            if {![info exists L_prom($chrom)]} {continue}
            set L_prom($chrom) [lsort -command AscendingSortOnElement0 [lsort -command AscendingSortOnElement1 [lsort -unique $L_prom($chrom)]]]
            foreach prom $L_prom($chrom) {
                lappend L_allProm "$chrom\t$prom\t${g_AnnotSV(tx)}_promoter\t[join [lsort -unique $genesProm($chrom\t$prom)] ";"]"
            }
        }
        WriteTextInFile [join $L_allProm "\n"] $promoterFormatted.tmp
        # Sorting of the bedfile:
        # Intersection with very large files can cause trouble with excessive memory usage.
        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n $promoterFormatted.tmp > $promoterFormatted" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkPromoterFile --"
            puts "sort -k1,1 -k2,2n $promoterFormatted.tmp > $promoterFormatted"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $sortTmpFile
        file delete -force $promoterFormatted.tmp
    }
    set g_AnnotSV(promAnn) 1
}


##  EnhancerAtlas
#################
## - Check if some "*_EP.txt" files have been downloaded
##
## - Check and create if necessary:
##   - EA_RefSeq_GRCh37.sorted.bed
##   - EA_ENSEMBL_GRCh37.sorted.bed
##
## - The GRCh38 version should be manually created by lift over with the UCSC web server, sorted, and
##   move in the “$ANNOTSV/share/AnnotSV/Annotations_Human/FtIncludedInSV/RegulatoryElements/GRCh38” directory.
proc checkEAfiles {} {
    
    global g_AnnotSV
    
    
    ## Check if EA files have been formatted
    ########################################
    set g_AnnotSV(EAann) 0
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)"
    set regElementsDir "$extannDir/FtIncludedInSV/RegulatoryElements"
    set EARefSeqFileFormattedGRCh37 "$regElementsDir/$g_AnnotSV(genomeBuild)/EA_RefSeq_$g_AnnotSV(genomeBuild).sorted.bed" ;# GRCh38 version should be manually created by lift over
    set EAENSEMBLfileFormattedGRCh37 "$regElementsDir/$g_AnnotSV(genomeBuild)/EA_ENSEMBL_$g_AnnotSV(genomeBuild).sorted.bed" ;# GRCh38 version should be manually created by lift over
    
    set necessaryEAfile "$regElementsDir/$g_AnnotSV(genomeBuild)/EA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"
    if {[file exists $necessaryEAfile]} {set g_AnnotSV(EAann) 1}
    
    if {[file exists $EARefSeqFileFormattedGRCh37] && [file exists $EAENSEMBLfileFormattedGRCh37]} {
        return
    }
    
    ###############################################
    ## No formatted EA files available at this step
    ###############################################
    
    ## Check if some EA files have been downloaded
    ##############################################
    set L_EAfiles [glob -nocomplain "$regElementsDir/GRCh37/*_EP.txt"] ;# only distributed in GRCh37
    if {$L_EAfiles eq ""} {
        return
    }
    
    ## Downloaded EA files are available
    ####################################
    
    # Line example:
    # chr1:1252950-1254670_ENSG00000160087$UBE2J2$chr1$1209265$-      1.205829
    #
    # Format:
    # For human, the data format in the file listed as "A:B-C_D$E$F$G$H	I":
    # A - Chromosome of enhancer.
    # B - The starting position of enhancer.
    # C - The ending position of enhancer.
    # D - Gene ensembl ID.
    # E - Gene ensembl Name.
    # F - chromosome of gene.
    # G - the position of the gene transcription start site.
    # H - The strand of DNA the gene located.
    # I - The predition score of the enhancer-gene interaction.
    
    puts "\t...EnhancerAtlas configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    
    ## Creation of EA_*_GRCh37.sorted.bed
    ##########################################
    ##   - # Header: chr EAstart EAend EAtype EAgene
    
    puts "\t\t...creation of [file tail $EARefSeqFileFormattedGRCh37] and [file tail $EAENSEMBLfileFormattedGRCh37]"
    puts "\t\t   (done only once)"
    puts "\t\t   For GRCh38 use, please lift over these GRCh37 files to GRCh38"
    
    file delete -force $EARefSeqFileFormattedGRCh37
    file delete -force $EAENSEMBLfileFormattedGRCh37
    
    # Writings:
    file delete -force $EARefSeqFileFormattedGRCh37.tmp
    file delete -force $EAENSEMBLfileFormattedGRCh37.tmp
    foreach EAfile $L_EAfiles {
        foreach L [LinesFromFile $EAfile] {
            if {[regexp "chr(\[0-9XYMT\]+):(\[0-9\]+)-(\[0-9\]+)_\[^\\\$\]+\\\$(\[^\\\$\]+)" $L match chrom start end gene]} {
                # RefSeq
                if {[isARefSeqGeneName $gene]} {
                    lappend L_coordRefSeq($chrom) "$chrom\t$start\t$end"
                    lappend L_genesRefSeq($chrom\t$start\t$end) "$gene"
                }
                # ENSEMBL
                if {[isAnENSEMBLgeneName $gene]} {
                    lappend L_coordENSEMBL($chrom) "$chrom\t$start\t$end"
                    lappend L_genesENSEMBL($chrom\t$start\t$end) "$gene"
                }
            }
        }
    }
    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
        # RefSeq
        if {[info exists L_coordRefSeq($chrom)]} {
            set L_coordRefSeq($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique $L_coordRefSeq($chrom)]]]
            set L_linesToWriteGRCh37 {}
            foreach coord $L_coordRefSeq($chrom) {
                set L_genesRefSeq($coord) [lsort -unique $L_genesRefSeq($coord)]
                lappend L_linesToWriteGRCh37 "$coord\tEA_enhancer\t[join $L_genesRefSeq($coord) ";"]"
            }
            WriteTextInFile "[join $L_linesToWriteGRCh37 "\n"]" $EARefSeqFileFormattedGRCh37.tmp
        }
        # ENSEMBL
        if {[info exists L_coordENSEMBL($chrom)]} {
            set L_coordENSEMBL($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique $L_coordENSEMBL($chrom)]]]
            set L_linesToWriteGRCh37 {}
            foreach coord $L_coordENSEMBL($chrom) {
                set L_genesENSEMBL($coord) [lsort -unique $L_genesENSEMBL($coord)]
                lappend L_linesToWriteGRCh37 "$coord\tEA_enhancer\t[join $L_genesENSEMBL($coord) ";"]"
            }
            WriteTextInFile "[join $L_linesToWriteGRCh37 "\n"]" $EAENSEMBLfileFormattedGRCh37.tmp
        }
    }
    
    # Sorting of the bedfile:
    # Intersection with very large files can cause trouble with excessive memory usage.
    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
    # RefSeq
    set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
    ReplaceTextInFile "#!/bin/bash" $sortTmpFile
    WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
    WriteTextInFile "export LC_ALL=C" $sortTmpFile
    WriteTextInFile "sort -k1,1 -k2,2n $EARefSeqFileFormattedGRCh37.tmp >> $EARefSeqFileFormattedGRCh37" $sortTmpFile
    file attributes $sortTmpFile -permissions 0755
    if {[catch {eval exec bash $sortTmpFile} Message]} {
        puts "-- checkEAfiles --"
        puts "sort -k1,1 -k2,2n $EARefSeqFileFormattedGRCh37.tmp >> $EARefSeqFileFormattedGRCh37"
        puts "$Message"
        puts "Exit with error"
        exit 2
    }
    file delete -force $sortTmpFile
    file delete -force $EARefSeqFileFormattedGRCh37.tmp
    # ENSEMBL
    set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
    ReplaceTextInFile "#!/bin/bash" $sortTmpFile
    WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
    WriteTextInFile "export LC_ALL=C" $sortTmpFile
    WriteTextInFile "sort -k1,1 -k2,2n $EAENSEMBLfileFormattedGRCh37.tmp >> $EAENSEMBLfileFormattedGRCh37" $sortTmpFile
    file attributes $sortTmpFile -permissions 0755
    if {[catch {eval exec bash $sortTmpFile} Message]} {
        puts "-- checkEAfiles --"
        puts "sort -k1,1 -k2,2n $EAENSEMBLfileFormattedGRCh37.tmp >> $EAENSEMBLfileFormattedGRCh37"
        puts "$Message"
        puts "Exit with error"
        exit 2
    }
    file delete -force $sortTmpFile
    file delete -force $EAENSEMBLfileFormattedGRCh37.tmp
    
    # Delete the downloaded files
    if {[file exists $EARefSeqFileFormattedGRCh37] && [file exists $EAENSEMBLfileFormattedGRCh37]} {
        foreach EAfile $L_EAfiles {
            file delete -force $EAfile
        }
    }
    
    set necessaryEAfile "$regElementsDir/$g_AnnotSV(genomeBuild)/EA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"
    if {[file exists $necessaryEAfile]} {set g_AnnotSV(EAann) 1}
}



## - Check if the following GH files has been downloaded:
##   - GeneHancer_elements.txt
##   - GeneHancer_gene_associations_scores.txt
##   - GeneHancer_hg19.txt
##   Or:
##   - GeneHancer_AnnotSV_elements_v5.25.txt
##   - GeneHancer_AnnotSV_gene_associations_scores_v5.25.txt (association w/ or w/o "s")
##   - GeneHancer_AnnotSV_hg19_v5.25.txt
##
## - Check and create if necessary:
##   - GH_RefSeq_GRCh37.sorted.bed
##   - GH_RefSeq_GRCh38.sorted.bed
##   - GH_ENSEMBL_GRCh37.sorted.bed
##   - GH_ENSEMBL_GRCh38.sorted.bed
proc checkGHfiles {} {
    
    global g_AnnotSV
    
    
    ## Check if GH files has been formatted
    #######################################
    set g_AnnotSV(GHann) 0
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)"
    set regElementsDir "$extannDir/FtIncludedInSV/RegulatoryElements"
    set GHRefSeqFileFormatted  "$regElementsDir/$g_AnnotSV(genomeBuild)/GH_RefSeq_$g_AnnotSV(genomeBuild).sorted.bed"
    set GHENSEMBLfileFormatted "$regElementsDir/$g_AnnotSV(genomeBuild)/GH_ENSEMBL_$g_AnnotSV(genomeBuild).sorted.bed"
    
    if {[file exists $GHRefSeqFileFormatted] && [file exists $GHENSEMBLfileFormatted]} {
        set g_AnnotSV(GHann) 1
        return
    }
    
    ###############################################
    ## No formatted GH files available at this step
    ###############################################
    
    ## Check if GH file has been downloaded and unzipped
    ####################################################
    # Checks if the unzipped GH files exist:
    set GHelementsF [glob -no complain "$regElementsDir/GeneHancer*elements*.txt"] ;# GRCh38
    set GHelementsF [expr {[llength $GHelementsF] > 0 ? [lindex $GHelementsF end] : "no_file_exists"}]
    set GHassociationsF [glob -nocomplain "$regElementsDir/GeneHancer*gene_association*_scores*.txt"] ;# genes
    set GHassociationsF [expr {[llength $GHassociationsF] > 0 ? [lindex $GHassociationsF end] : "no_file_exists"}]
    set GHhg19F [glob -nocomplain "$regElementsDir/GeneHancer*hg19*.txt"] ;# GRCh37
    set GHhg19F [expr {[llength $GHhg19F] > 0 ? [lindex $GHhg19F end] : "no_file_exists"}]
    foreach GHfile "$GHelementsF $GHassociationsF $GHhg19F" {
        if {![file exists $GHfile]} {
            if {$g_AnnotSV(organism) eq "Human"} {
                puts "\nWARNING: No GeneHancer annotations available."
                puts "(Please, see in the README file how to add these annotations. Users need to contact the GeneCards team.)\n"
            }
            return
        }
    }
    
    ## Downloaded GH files have been unzipped and are available
    ###########################################################
    puts "\t...GeneHancer configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    
    ## Creation of the 4 GH formatted files (RefSeq and ENSEMBL, GRCh37 and GRCh38)
    ##   - # Header: chr GHstart GHend GHtype GHgene
    set GHRefSeqFileFormatted37  "$regElementsDir/GRCh37/GH_RefSeq_GRCh37.sorted.bed"
    set GHRefSeqFileFormatted38  "$regElementsDir/GRCh38/GH_RefSeq_GRCh38.sorted.bed"
    set GHENSEMBLfileFormatted37 "$regElementsDir/GRCh37/GH_ENSEMBL_GRCh37.sorted.bed"
    set GHENSEMBLfileFormatted38 "$regElementsDir/GRCh38/GH_ENSEMBL_GRCh38.sorted.bed"
    
    puts "\t\t...creation of the 4 GH_*_GRCh3*.sorted.bed files"
    puts "\t\t   (done only once)"
    
    file delete -force $GHRefSeqFileFormatted37
    file delete -force $GHRefSeqFileFormatted38
    file delete -force $GHENSEMBLfileFormatted37
    file delete -force $GHENSEMBLfileFormatted38
    
    # $GHelementsF (GRCh38)
    # Header: chr element_start element_end GHid is_elite regulatory_element_type
    foreach L [LinesFromFile $GHelementsF] {
        set Ls [split $L "\t"]
        if {[regexp "^chr" $L]} {
            set i_GHstart [lsearch -exact $Ls "element_start"]
            set i_GHend [lsearch -exact $Ls "element_end"]
            set i_GHid [lsearch -exact $Ls "GHid"]
            set i_GHtype [lsearch -exact $Ls "regulatory_element_type"]
            continue
        }
        regsub "chr" [lindex $Ls 0] "" chrom
        set GHid [lindex $Ls $i_GHid]
        lappend L_GHid($chrom) "$GHid"
        
        set GHstart [lindex $Ls $i_GHstart]
        set GHend [lindex $Ls $i_GHend]
        set coordGRCh38($GHid) "$chrom\t$GHstart\t$GHend"
        regsub -all "/" [lindex $Ls $i_GHtype] "_" type($GHid)
        regsub "promoter_enhancer" $type($GHid) "enhancer" type($GHid) ;# to simplify the annotation in the AnnotSV output \
        # (we don't want: "RE=GH_enhancer+GH_promoter+GH_promoter_enhancer" in the RE_gene output column)
        set type($GHid) "GH_[string tolower $type($GHid)]"
        set L_GHgene(RefSeq,$GHid) "" ;# initialisation before the next foreach
        set L_GHgene(ENSEMBL,$GHid) "" ;# initialisation before the next foreach
    }
    
    # $GHassociationsF => genes
    # Header: GHid symbol combined_score is_elite
    foreach L [LinesFromFile $GHassociationsF] {
        set Ls [split $L "\t"]
        if {[regexp "^GHid" $L]} {
            set i_GHid [lsearch -exact $Ls "GHid"]
            set i_regulatedGene [lsearch -exact $Ls "symbol"]
            continue
        }
        set GHid [lindex $Ls $i_GHid]
        set gene [lindex $Ls $i_regulatedGene]
        if {[isARefSeqGeneName $gene]} {
            lappend L_GHgene(RefSeq,$GHid) $gene
        }
        if {[isAnENSEMBLgeneName $gene]} {
            lappend L_GHgene(ENSEMBL,$GHid) $gene
        }
    }
    
    # $GHhg19F
    # Header: chromosome start end GHid
    foreach L [LinesFromFile $GHhg19F] {
        set Ls [split $L "\t"]
        if {[regexp "^chromosome" $L]} {
            set i_GHstart [lsearch -exact $Ls "start"]
            set i_GHend [lsearch -exact $Ls "end"]
            set i_GHid [lsearch -exact $Ls "GHid"]
            continue
        }
        set GHid [lindex $Ls $i_GHid]
        regsub "chr" [lindex $Ls 0] "" chrom
        set GHstart [lindex $Ls $i_GHstart]
        set GHend [lindex $Ls $i_GHend]
        set coordGRCh37($GHid) "$chrom\t$GHstart\t$GHend"
    }
    
    # Writings:
    file delete -force $GHRefSeqFileFormatted37.tmp
    file delete -force $GHRefSeqFileFormatted38.tmp
    file delete -force $GHENSEMBLfileFormatted37.tmp
    file delete -force $GHENSEMBLfileFormatted38.tmp
    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
        if {![info exists L_GHid($chrom)]} {continue}
        set L_linesToWriteRefSeqGRCh37 {}
        set L_linesToWriteRefSeqGRCh38 {}
        set L_linesToWriteENSEMBLGRCh37 {}
        set L_linesToWriteENSEMBLGRCh38 {}
        foreach GHid $L_GHid($chrom) {
            # remove some enhancers (those for which no external identifiers are available, e.g. "hsa-miR-1273e-082")
            ## Header: chr GHstart GHend GHtype GHgene
            if {$L_GHgene(RefSeq,$GHid) ne ""} {
                catch {lappend L_linesToWriteRefSeqGRCh37 "$coordGRCh37($GHid)\t$type($GHid)\t[join $L_GHgene(RefSeq,$GHid) ";"]"}
                catch {lappend L_linesToWriteRefSeqGRCh38 "$coordGRCh38($GHid)\t$type($GHid)\t[join $L_GHgene(RefSeq,$GHid) ";"]"}
            }
            if {$L_GHgene(ENSEMBL,$GHid) ne ""} {
                catch {lappend L_linesToWriteENSEMBLGRCh37 "$coordGRCh37($GHid)\t$type($GHid)\t[join $L_GHgene(ENSEMBL,$GHid) ";"]"}
                catch {lappend L_linesToWriteENSEMBLGRCh38 "$coordGRCh38($GHid)\t$type($GHid)\t[join $L_GHgene(ENSEMBL,$GHid) ";"]"}
            }
        }
        set L_linesToWriteRefSeqGRCh37 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteRefSeqGRCh37]]
        set L_linesToWriteRefSeqGRCh38 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteRefSeqGRCh38]]
        set L_linesToWriteENSEMBLGRCh37 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteENSEMBLGRCh37]]
        set L_linesToWriteENSEMBLGRCh38 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteENSEMBLGRCh38]]
        WriteTextInFile "[join $L_linesToWriteRefSeqGRCh37 "\n"]" $GHRefSeqFileFormatted37.tmp
        WriteTextInFile "[join $L_linesToWriteRefSeqGRCh38 "\n"]" $GHRefSeqFileFormatted38.tmp
        WriteTextInFile "[join $L_linesToWriteENSEMBLGRCh37 "\n"]" $GHENSEMBLfileFormatted37.tmp
        WriteTextInFile "[join $L_linesToWriteENSEMBLGRCh38 "\n"]" $GHENSEMBLfileFormatted38.tmp
    }
    
    # Sorting of the bedfile:
    # Intersection with very large files can cause trouble with excessive memory usage.
    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
    foreach GHfile {GHRefSeqFileFormatted37 GHRefSeqFileFormatted38 GHENSEMBLfileFormatted37 GHENSEMBLfileFormatted38} {
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n [set $GHfile].tmp >> [set $GHfile]" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkGHfiles --"
            puts "sort -k1,1 -k2,2n [set $GHfile].tmp >> [set $GHfile]"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $sortTmpFile
        file delete -force [set $GHfile].tmp
    }
    
    # Delete the downloaded files
    if {[file exists $GHRefSeqFileFormatted37] && [file exists $GHRefSeqFileFormatted38] && [file exists $GHENSEMBLfileFormatted37] && [file exists $GHENSEMBLfileFormatted38]} {
        foreach GHfile "$GHelementsF $GHassociationsF $GHhg19F $regElementsDir/GeneHancer_tissues.txt $regElementsDir/ReadMe.txt" {
            file delete -force $GHfile
        }
    }
    set g_AnnotSV(GHann) 1
}




## Human:
#########
## - Check if the following miRTargetLink files has been downloaded:
##   - Validated_miRNA-gene_pairs_hsa_miRBase_v22.1_GRCh38_location_augmented.tsv
##
## - Check and create if necessary:
##   - miRTargetLink_RefSeq_GRCh38.sorted.bed
##   - miRTargetLink_ENSEMBL_GRCh38.sorted.bed
##
## - GRCh37 miRTargetLink are not provided (only GRCh38)
##   - miRTargetLink_ENSEMBL_GRCh37.sorted.bed => created with a UCSC liftover
##   - miRTargetLink_RefSeq_GRCh37.sorted.bed  => created with a UCSC liftover
#
## Mouse:
#########
## - Check if the following miRTargetLink files has been downloaded:
##   - Validated_miRNA-gene_pairs_mmu_miRBase_v22.1_GRCm38_location_augmented.tsv
##
## - Check and create if necessary:
##   - miRTargetLink_RefSeq_mm10.sorted.bed
##
## - mm9 miRTargetLink is not provided (only mm10)
##   - miRTargetLink_RefSeq_mm9.sorted.bed  => created with a UCSC liftover
proc checkMiRTargetLinkFiles {} {
    
    global g_AnnotSV
    
    set g_AnnotSV(miRNAann) 0
    
    ## Check if miRTargetLink files has been formatted
    ##################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)"
    set regElementsDir "$extannDir/FtIncludedInSV/RegulatoryElements"
    set miRNARefSeqFileFormatted  "$regElementsDir/$g_AnnotSV(genomeBuild)/miRTargetLink_RefSeq_$g_AnnotSV(genomeBuild).sorted.bed"
    set miRNAENSEMBLfileFormatted "$regElementsDir/$g_AnnotSV(genomeBuild)/miRTargetLink_ENSEMBL_$g_AnnotSV(genomeBuild).sorted.bed"
    if {$g_AnnotSV(organism) eq "Human"} {
        if {[file exists $miRNARefSeqFileFormatted] && [file exists $miRNAENSEMBLfileFormatted]} {
            set g_AnnotSV(miRNAann) 1
            return
        }
    } elseif {$g_AnnotSV(organism) eq "Mouse"} {
        if {[file exists $miRNARefSeqFileFormatted]} {
            set g_AnnotSV(miRNAann) 1
            return
        }
    }
    
    ##########################################################
    ## No formatted miRTargetLink files available at this step
    ##########################################################
    
    ## miRTargetLink is only available in GRCh38 and mm10
    #####################################################
    if {$g_AnnotSV(genomeBuild) ne "GRCh38" && $g_AnnotSV(genomeBuild) ne "mm10"} {
        return
    }
    
    ## Check if miRTargetLink file has been downloaded
    ##################################################
    # Checks if the miRTargetLink file exist:
    # (we only keep the validated miRNA file. But the code is OK to also keep the predicted miRNA file if wanted)
    if {$g_AnnotSV(genomeBuild) eq "GRCh38"} {
        set miRNAfilesDownloaded [glob -nocomplain "$regElementsDir/*_miRNA-gene_pairs_hsa_miRBase_*_GRCh38_location_augmented.tsv"];# Validated (+ Predicted) miRNA files
    } elseif {$g_AnnotSV(genomeBuild) eq "mm10"} {
        set miRNAfilesDownloaded [glob -nocomplain "$regElementsDir/*_miRNA-gene_pairs_mmu_miRBase_*_GRCm38_location_augmented.tsv"];# Validated (+ Predicted) miRNA files
    }
    if {$miRNAfilesDownloaded eq ""} {
        return
    }
    
    ## Downloaded miRTargetLink file is available
    #############################################
    puts "\t...miRTargetLink configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    
    ## Creation of the 2 miRNA formatted files: RefSeq (GRCh38 + mm10)and ENSEMBL (GRCh38)
    ##   - # Header: chr miRNAstart miRNAend miRNAtype miRNAgene
    set miRNARefSeqFileFormatted38or10  "$regElementsDir/$g_AnnotSV(genomeBuild)/miRTargetLink_RefSeq_$g_AnnotSV(genomeBuild).sorted.bed"
    set miRNAENSEMBLfileFormatted38     "$regElementsDir/$g_AnnotSV(genomeBuild)/miRTargetLink_ENSEMBL_$g_AnnotSV(genomeBuild).sorted.bed"
    
    puts "\t\t...creation of the miRNA_*_$g_AnnotSV(genomeBuild).sorted.bed files"
    puts "\t\t   (done only once)"
    
    file delete -force $miRNARefSeqFileFormatted38or10
    file delete -force $miRNAENSEMBLfileFormatted38
    
    # Validated_miRNA-gene_pairs_hsa_miRBase_v22.1_GRCh38_location_augmented.tsv:
    #    seqnames  start          end             strand  ID              Alias           Name             species   target_gene     confidence
    #    chr11     122146523      122146544       -       MIMAT0010195    MIMAT0010195    hsa-let-7a-2-3p  hsa       CADM1           Functional MTI (Weak)
    #    chr11     122146523      122146544       -       MIMAT0010195    MIMAT0010195    hsa-let-7a-2-3p  hsa       ARID1A          Functional MTI (Weak)
    # Validated_miRNA-gene_pairs_mmu_miRBase_v22.1_GRCm38_location_augmented.tsv
    #    seqnames  start          end             strand  ID              Alias           Name            species    target_gene     confidence
    #    chr13     48538239       48538260        -       MIMAT0000521    MIMAT0000521    mmu-let-7a-5p   mmu        Hoxa9           Functional MTI
    #    chr13     48538239       48538260        -       MIMAT0000521    MIMAT0000521    mmu-let-7a-5p   mmu        Hmga2           Functional MTI
    foreach miRNAfile $miRNAfilesDownloaded {   ;# Validated and predicted
        foreach L [LinesFromFile $miRNAfile] {
            set Ls [split $L "\t"]
            if {[regexp "^seqnames" $L]} {
                set i_miRNAchrom [lsearch -exact $Ls "seqnames"]
                set i_miRNAstart [lsearch -exact $Ls "start"]
                set i_miRNAend   [lsearch -exact $Ls "end"]
                set i_miRNAgene  [lsearch -exact $Ls "target_gene"]
                continue
            }
            regsub "chr" [lindex $Ls $i_miRNAchrom] "" chrom
            set miRNAstart [lindex $Ls $i_miRNAstart]
            set miRNAend [lindex $Ls $i_miRNAend]
            set coord "$chrom\t$miRNAstart\t$miRNAend"
            lappend L_Genes($coord) [lindex $Ls $i_miRNAgene]
            lappend L_coord($chrom) "$coord"
        }
    }
    # Writings:
    file delete -force $miRNARefSeqFileFormatted38or10.tmp
    file delete -force $miRNAENSEMBLfileFormatted38.tmp
    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
        if {![info exists L_coord($chrom)]} {continue}
        set L_linesToWriteRefSeqGRCh38or10 {}
        set L_linesToWriteENSEMBLGRCh38 {}
        foreach coord [lsort -unique $L_coord($chrom)] {
            set allRefSeqGenes ""
            set allEnsemblGenes ""
            foreach gene $L_Genes($coord) {
                if {[isARefSeqGeneName $gene]} {
                    lappend allRefSeqGenes $gene
                }
                if {[isAnENSEMBLgeneName $gene]} {
                    lappend allEnsemblGenes $gene
                }
            }
            if {$allRefSeqGenes ne ""} {lappend L_linesToWriteRefSeqGRCh38or10 "$coord\tmTL_miRNA\t[join [lsort -unique $allRefSeqGenes] ";"]"}
            if {$allEnsemblGenes ne ""} {lappend L_linesToWriteENSEMBLGRCh38 "$coord\tmTL_miRNA\t[join [lsort -unique $allEnsemblGenes] ";"]"}
        }
        set L_linesToWriteRefSeqGRCh38or10 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteRefSeqGRCh38or10]]
        set L_linesToWriteENSEMBLGRCh38 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteENSEMBLGRCh38]]
        WriteTextInFile "[join $L_linesToWriteRefSeqGRCh38or10 "\n"]" $miRNARefSeqFileFormatted38or10.tmp
        if {$g_AnnotSV(genomeBuild) eq "GRCh38"} {
            WriteTextInFile "[join $L_linesToWriteENSEMBLGRCh38 "\n"]" $miRNAENSEMBLfileFormatted38.tmp
        }
    }
    
    # Sorting of the bedfile:
    # Intersection with very large files can cause trouble with excessive memory usage.
    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
    foreach miRNAfile {miRNARefSeqFileFormatted38or10 miRNAENSEMBLfileFormatted38} {
        if {![file exists [set $miRNAfile].tmp]} {continue} ;# use for Mouse annotation, ENSEMBL annotation doesn't exist
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n [set $miRNAfile].tmp >> [set $miRNAfile]" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkMiRTargetLinkFiles --"
            puts "sort -k1,1 -k2,2n [set $miRNAfile].tmp >> [set $miRNAfile]"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $sortTmpFile
        file delete -force [set $miRNAfile].tmp
    }
    
    # Delete the downloaded files
    foreach miRNAfile $miRNAfilesDownloaded {
        file delete -force $miRNAfile
    }
    
    set g_AnnotSV(miRNAann) 1
}


##  ABC
#################
## - Check if "AllPredictions.AvgHiC.ABC0.015.minus150.ForABCPaperV3.txt.gz" has been downloaded
##
## - Check and create if necessary:
##   - ABC_RefSeq_GRCh37.sorted.bed
##   - ABC_ENSEMBL_GRCh37.sorted.bed
##
## - The GRCh38 version should be manually created by lift over with the UCSC web server, sorted, and
##   move in the “$ANNOTSV/share/AnnotSV/Annotations_Human/FtIncludedInSV/RegulatoryElements/GRCh38” directory.
proc checkABCfiles {} {
    
    global g_AnnotSV
    
    
    ## Check if ABC files have been formatted
    ########################################
    set g_AnnotSV(ABCann) 0
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)"
    set regElementsDir "$extannDir/FtIncludedInSV/RegulatoryElements"
    set necessaryABCfile "$regElementsDir/$g_AnnotSV(genomeBuild)/ABC_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"
    if {[file exists $necessaryABCfile]} {set g_AnnotSV(ABCann) 1}
    
    set ABCRefSeqFileFormattedGRCh37 "$regElementsDir/GRCh37/ABC_RefSeq_GRCh37.sorted.bed" ;# GRCh38 version should be manually created by lift over
    set ABCENSEMBLfileFormattedGRCh37 "$regElementsDir/GRCh37/ABC_ENSEMBL_GRCh37.sorted.bed" ;# GRCh38 version should be manually created by lift over
    if {[file exists $ABCRefSeqFileFormattedGRCh37] && [file exists $ABCENSEMBLfileFormattedGRCh37]} {
        return
    }
    
    ###############################################
    ## No formatted ABC file available at this step
    ###############################################
    
    ## Check if the ABC file has been downloaded
    ############################################
    set DownloadedABCfile "$regElementsDir/GRCh37/AllPredictions.AvgHiC.ABC0.015.minus150.ForABCPaperV3.txt.gz" ;# only distributed in GRCh37
    if {![file exists $DownloadedABCfile]} {
        return
    }
    
    ## Downloaded ABC file is available
    ###################################
    # Line example:
    # chr1    710010  710210  genic|chr1:709860-710360        genic   0.420794        LOC100288069    714068  NA      0.815301        True    3958    False   0.125372        0.125372        0.123436        0.123436      0.001216 0.124652        0.052453        0.025955        0.051941        0.021762        brite_adipose-Loft2014
    #
    # Format:
    # 1. chr: enhancer chromosome (eg chr1)
    # 2. start: enhancer start position (eg 710010)
    # 3. end: enhancer end position (eg 710210)
    # 4. name: enhancer name made of its class and its initial (before size normalization) coordinates (eg genic|chr1:709860-710360)
    # 5. class: enhancer class, i.e. position with respect to genes (eg genic)
    # 6. activity_base: geometric mean DHS (or ATAC) and H3K27ac. This is the Activity used in the ABC Score (eg 0.420794)
    # 7. TargetGene: enhancer target gene (eg LOC100288069)
    # 8. TargetGeneTSS: enhancer target gene TSS position (eg 714068)
    # 9. TargetGeneExpression: enhancer target gene expression (eg NA if no gene expression but the activity of the gene promoter was used)
    # 10. TargetGenePromoterActivityQuantile: quantile of Activity at Promoter of target gene (eg 0.815301)
    # 11. TargetGeneIsExpressed: whether enhancer target gene is expressed (eg True)
    # 12. distance: distance in bp between enhancer and TSS of target gene (eg 3958)
    # 13. isSelfPromoter: boolean denoting whether element is the promoter of the TargetGene (eg False)
    # 14. hic_contact: K-R normalized Hi-C contacts between element and TargetGene TSS (eg 0.125372)
    # 15. powerlaw_contact: contact between enhancer and gene predicted by power law in the cell type (eg 0.125372)
    # 16. powerlaw_contact_reference: contact between enhancer and gene predicted by power law in K562 (eg 0.123436)
    # 17. hic_contact_pl_scaled: hic_contact scaled by the difference in powerlaw fits between target cell type and reference cell type (eg 0.123436)
    # 18. hic_pseudocount: pseudocount added to HiC Contact (eg 0.001216)
    # 19. hic_contact_pl_scaled_adj: powerlaw scaled KR Normalized HiC plus pseudocount. This is the Contact used in the ABC Score (eg 0.124652)
    # 20. ABC.Score.Numerator: the numator of the ABC Score. Activity x Contact without dividing by the scores for other elements near the Target Gene (eg 0.052453)
    # 21. ABC.Score: ABC Score for the enhancer/gene relationship in this cell type (eg 0.025955)
    # 22. powerlaw.Score.Numerator: power law score numerator (eg 0.051941)
    # 23. powerlaw.Score: power law score (eg 0.021762)
    # 24. CellType: cell type where the enhancer/gene relationship is seen (eg brite_adipose-Loft2014)
    
    puts "\t...ABC configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    
    ## Creation of ABC_*_GRCh37.sorted.bed
    ##########################################
    ##   - # Header: chr ABCstart ABCend ABCtype ABCgenes
    
    puts "\t\t...creation of [file tail $ABCRefSeqFileFormattedGRCh37] and [file tail $ABCENSEMBLfileFormattedGRCh37]"
    puts "\t\t   (done only once)"
    puts "\t\t   For GRCh38 use, please lift over these GRCh37 files to GRCh38"
    
    file delete -force $ABCRefSeqFileFormattedGRCh37
    file delete -force $ABCENSEMBLfileFormattedGRCh37
    
    # Writings:
    file delete -force $ABCRefSeqFileFormattedGRCh37.tmp
    file delete -force $ABCENSEMBLfileFormattedGRCh37.tmp
    
    set f [open "| gzip -cd $DownloadedABCfile"]
    while {! [eof $f]} {
        set L [gets $f]
        set Ls [split $L "\t"]
        if {[regexp "^chr\t" $L]} {
            set i_start [lsearch -exact $Ls "start"]
            set i_end [lsearch -exact $Ls "end"]
            set i_gene [lsearch -exact $Ls "TargetGene"]
            continue
        }
        regsub "chr" [lindex $Ls 0] "" chrom
        set start [lindex $Ls $i_start]
        set end [lindex $Ls $i_end]
        set gene [lindex $Ls $i_gene]
        # RefSeq
        if {[isARefSeqGeneName $gene]} {
            lappend L_coordRefSeq($chrom) "$chrom\t$start\t$end"
            lappend L_genesRefSeq($chrom\t$start\t$end) "$gene"
        }
        # ENSEMBL
        if {[isAnENSEMBLgeneName $gene]} {
            lappend L_coordENSEMBL($chrom) "$chrom\t$start\t$end"
            lappend L_genesENSEMBL($chrom\t$start\t$end) "$gene"
        }
    }
    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
        # RefSeq
        if {[info exists L_coordRefSeq($chrom)]} {
            set L_coordRefSeq($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique $L_coordRefSeq($chrom)]]]
            set L_linesToWriteGRCh37 {}
            foreach coord $L_coordRefSeq($chrom) {
                set L_genesRefSeq($coord) [lsort -unique $L_genesRefSeq($coord)]
                lappend L_linesToWriteGRCh37 "$coord\tABC_enhancer\t[join $L_genesRefSeq($coord) ";"]"
            }
            WriteTextInFile "[join $L_linesToWriteGRCh37 "\n"]" $ABCRefSeqFileFormattedGRCh37.tmp
        }
        # ENSEMBL
        if {[info exists L_coordENSEMBL($chrom)]} {
            set L_coordENSEMBL($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique $L_coordENSEMBL($chrom)]]]
            set L_linesToWriteGRCh37 {}
            foreach coord $L_coordENSEMBL($chrom) {
                set L_genesENSEMBL($coord) [lsort -unique $L_genesENSEMBL($coord)]
                lappend L_linesToWriteGRCh37 "$coord\tABC_enhancer\t[join $L_genesENSEMBL($coord) ";"]"
            }
            WriteTextInFile "[join $L_linesToWriteGRCh37 "\n"]" $ABCENSEMBLfileFormattedGRCh37.tmp
        }
    }
    
    # Sorting of the bedfile:
    # Intersection with very large files can cause trouble with excessive memory usage.
    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
    # RefSeq
    set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
    ReplaceTextInFile "#!/bin/bash" $sortTmpFile
    WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
    WriteTextInFile "export LC_ALL=C" $sortTmpFile
    WriteTextInFile "sort -k1,1 -k2,2n $ABCRefSeqFileFormattedGRCh37.tmp >> $ABCRefSeqFileFormattedGRCh37" $sortTmpFile
    file attributes $sortTmpFile -permissions 0755
    if {[catch {eval exec bash $sortTmpFile} Message]} {
        puts "-- checkABCfiles --"
        puts "sort -k1,1 -k2,2n $ABCRefSeqFileFormattedGRCh37.tmp >> $ABCRefSeqFileFormattedGRCh37"
        puts "$Message"
        puts "Exit with error"
        exit 2
    }
    file delete -force $sortTmpFile
    file delete -force $ABCRefSeqFileFormattedGRCh37.tmp
    # ENSEMBL
    set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
    ReplaceTextInFile "#!/bin/bash" $sortTmpFile
    WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
    WriteTextInFile "export LC_ALL=C" $sortTmpFile
    WriteTextInFile "sort -k1,1 -k2,2n $ABCENSEMBLfileFormattedGRCh37.tmp >> $ABCENSEMBLfileFormattedGRCh37" $sortTmpFile
    file attributes $sortTmpFile -permissions 0755
    if {[catch {eval exec bash $sortTmpFile} Message]} {
        puts "-- checkABCfiles --"
        puts "sort -k1,1 -k2,2n $ABCENSEMBLfileFormattedGRCh37.tmp >> $ABCENSEMBLfileFormattedGRCh37"
        puts "$Message"
        puts "Exit with error"
        exit 2
    }
    file delete -force $sortTmpFile
    file delete -force $ABCENSEMBLfileFormattedGRCh37.tmp
    
    # Delete the downloaded files
    if {[file exists $ABCRefSeqFileFormattedGRCh37] && [file exists $ABCENSEMBLfileFormattedGRCh37]} {
        file delete -force $DownloadedABCfile
    }
    
    set necessaryABCfile "$regElementsDir/$g_AnnotSV(genomeBuild)/ABC_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"
    if {[file exists $necessaryABCfile]} {set g_AnnotSV(ABCann) 1}
}



##  MPRA
#################
## - Check if "MPRA_promoters.tsv" and "MPRA_enhancers.tsv" have been copy/paste
##   (https://kircherlab.bihealth.org/satMutMPRA)
##
## - Check and create if necessary:
##   - MPRA_RefSeq_GRCh37.sorted.bed
##   - MPRA_ENSEMBL_GRCh37.sorted.bed
##   - MPRA_RefSeq_GRCh38.sorted.bed
##   - MPRA_ENSEMBL_GRCh38.sorted.bed
proc checkMPRAfiles {} {
    
    global g_AnnotSV
    
    
    ## Check if MPRA files have been formatted
    ########################################
    set g_AnnotSV(MPRAann) 0
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)"
    set regElementsDir "$extannDir/FtIncludedInSV/RegulatoryElements"
    set necessaryMPRAfile "$regElementsDir/$g_AnnotSV(genomeBuild)/MPRA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"
    if {[file exists $necessaryMPRAfile]} {set g_AnnotSV(MPRAann) 1; return}
    
    set MPRARefSeqFileFormattedGRCh37 "$regElementsDir/GRCh37/MPRA_RefSeq_GRCh37.sorted.bed"
    set MPRAENSEMBLfileFormattedGRCh37 "$regElementsDir/GRCh37/MPRA_ENSEMBL_GRCh37.sorted.bed"
    set MPRARefSeqFileFormattedGRCh38 "$regElementsDir/GRCh38/MPRA_RefSeq_GRCh38.sorted.bed"
    set MPRAENSEMBLfileFormattedGRCh38 "$regElementsDir/GRCh38/MPRA_ENSEMBL_GRCh38.sorted.bed"
    if {[file exists $MPRARefSeqFileFormattedGRCh37] && [file exists $MPRAENSEMBLfileFormattedGRCh37] && [file exists $MPRARefSeqFileFormattedGRCh38] && [file exists $MPRAENSEMBLfileFormattedGRCh38]} {
        return
    }
    
    ###############################################
    ## No formatted MPRA file available at this step
    ###############################################
    
    ## Check if the MPRA files have been downloaded
    ###############################################
    set DownloadedMPRAfile_promoters "$regElementsDir/MPRA_promoters.tsv" ;# Distributed with GRCh37/GRCh38 coordinates in the same file
    set DownloadedMPRAfile_enhancers "$regElementsDir/MPRA_enhancers.tsv" ;# Distributed with GRCh37/GRCh38 coordinates in the same file
    if {![file exists $DownloadedMPRAfile_promoters] || ![file exists $DownloadedMPRAfile_enhancers]} {
        return
    }
    
    ## Downloaded MPRA file is available
    ###################################
    ## MPRA_enhancers.tsv format:
    #  Name    Genomic coordinates (GRCh37)    Genomic coordinates (GRCh38)    Transcript      Associated Phenotype    Luciferase vector       MPRA vector     Cell line	...
    ## MPRA_enhancers.tsv format:
    #  Name    Genomic coordinates (GRCh37)    Genomic coordinates (GRCh38)    Associated Phenotype    Luciferase vector       MPRA vector     Cell line       Transf. time (hr)		...
    
    puts "\t...MPRA configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    
    ## Creation of MPRA_*_*.sorted.bed
    ##########################################
    # Header: chr MPRAstart MPRAend MPRAtype MPRAgenes
    
    puts "\t\t...creation of [file tail $MPRARefSeqFileFormattedGRCh37], [file tail $MPRAENSEMBLfileFormattedGRCh37], [file tail $MPRARefSeqFileFormattedGRCh38] and [file tail $MPRAENSEMBLfileFormattedGRCh38]"
    puts "\t\t   (done only once)"
    
    file delete -force $MPRARefSeqFileFormattedGRCh37
    file delete -force $MPRAENSEMBLfileFormattedGRCh37
    file delete -force $MPRARefSeqFileFormattedGRCh38
    file delete -force $MPRAENSEMBLfileFormattedGRCh38
    
    # Writings:
    file delete -force $MPRARefSeqFileFormattedGRCh37.tmp
    file delete -force $MPRAENSEMBLfileFormattedGRCh37.tmp
    file delete -force $MPRARefSeqFileFormattedGRCh38.tmp
    file delete -force $MPRAENSEMBLfileFormattedGRCh38.tmp
    
    set L_toParse [LinesFromFile $DownloadedMPRAfile_promoters]
    lappend L_toParse {*}[LinesFromFile $DownloadedMPRAfile_enhancers]
    
    foreach L $L_toParse {
        set Ls [split $L "\t"]
        if {[regexp "^Name\t" $L]} {
            set i_coord37 [lsearch -exact $Ls "Genomic coordinates (GRCh37)"] ; #e.g. "chrX:138,612,622-138,612,924"
            set i_coord38 [lsearch -exact $Ls "Genomic coordinates (GRCh38)"]
            if {[regexp "Transcript" $L]} {
                set MPRAtype "MPRA_promoter"
            } else {
                set MPRAtype "MPRA_enhancer"
            }
            continue
        }
        regsub -all "," [lindex $Ls $i_coord37] "" coord37
        regsub -all "," [lindex $Ls $i_coord38] "" coord38
        if {![regexp "chr(\[0-9XYMT\]+):(\[0-9\]+)-(\[0-9\]+)" $coord37 match chrom37 start37 end37]} {
            puts "Bad format in $DownloadedMPRAfile_promoters"
            puts "$L"
            puts "Check this format."
        }
        if {![regexp "chr(\[0-9XYMT\]+):(\[0-9\]+)-(\[0-9\]+)" $coord38 match chrom38 start38 end38]} {
            puts "Bad format in $DownloadedMPRAfile_promoters"
            puts "$L"
            puts "Check this format."
        }
        set gene [lindex $Ls 0]
        regsub " \\(.+|\\+.+" $gene "" gene
        
        set type($chrom37\t$start37\t$end37) "$MPRAtype"
        set type($chrom38\t$start38\t$end38) "$MPRAtype"
        # RefSeq
        if {[isARefSeqGeneName $gene]} {
            lappend L_coordRefSeq37($chrom37) "$chrom37\t$start37\t$end37"
            lappend L_genesRefSeq37($chrom37\t$start37\t$end37) "$gene"
            lappend L_coordRefSeq38($chrom38) "$chrom38\t$start38\t$end38"
            lappend L_genesRefSeq38($chrom38\t$start38\t$end38) "$gene"
        }
        # ENSEMBL
        if {[isAnENSEMBLgeneName $gene]} {
            lappend L_coordENSEMBL37($chrom37) "$chrom37\t$start37\t$end37"
            lappend L_genesENSEMBL37($chrom37\t$start37\t$end37) "$gene"
            lappend L_coordENSEMBL38($chrom38) "$chrom38\t$start38\t$end38"
            lappend L_genesENSEMBL38($chrom38\t$start38\t$end38) "$gene"
        }
    }
    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
        foreach build {"37" "38"} {
            # RefSeq
            if {[info exists L_coordRefSeq[set build]($chrom)]} {
                set L_coordRefSeq[set build]($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique [set L_coordRefSeq[set build]($chrom)]]]]
                set L_linesToWrite[set build] {}
                foreach coord [set L_coordRefSeq[set build]($chrom)] {
                    set L_genesRefSeq[set build]($coord) [lsort -unique [set L_genesRefSeq[set build]($coord)]]
                    lappend L_linesToWrite[set build] "$coord\t$type($coord)\t[join [set L_genesRefSeq[set build]($coord)] ";"]"
                }
                WriteTextInFile "[join [set L_linesToWrite[set build]] "\n"]" [set MPRARefSeqFileFormattedGRCh[set build]].tmp
            }
            # ENSEMBL
            if {[info exists L_coordENSEMBL[set build]($chrom)]} {
                set L_coordENSEMBL[set build]($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique [set L_coordENSEMBL[set build]($chrom)]]]]
                set L_linesToWrite[set build] {}
                foreach coord [set L_coordENSEMBL[set build]($chrom)] {
                    set L_genesENSEMBL[set build]($coord) [lsort -unique [set L_genesENSEMBL[set build]($coord)]]
                    lappend L_linesToWrite[set build] "$coord\t$type($coord)\t[join [set L_genesENSEMBL[set build]($coord)] ";"]"
                }
                WriteTextInFile "[join [set L_linesToWrite[set build]] "\n"]" [set MPRAENSEMBLfileFormattedGRCh[set build]].tmp
            }
        }
    }
    
    
    foreach build {"37" "38"} {
        # Sorting of the bedfile:
        # Intersection with very large files can cause trouble with excessive memory usage.
        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        # RefSeq
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n [set MPRARefSeqFileFormattedGRCh[set build]].tmp >> [set MPRARefSeqFileFormattedGRCh[set build]]" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkMPRAfiles --"
            puts "sort -k1,1 -k2,2n [set MPRARefSeqFileFormattedGRCh[set build]].tmp >> [set MPRARefSeqFileFormattedGRCh[set build]]"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $sortTmpFile
        file delete -force [set MPRARefSeqFileFormattedGRCh[set build]].tmp
        # ENSEMBL
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n [set MPRAENSEMBLfileFormattedGRCh[set build]].tmp >> [set MPRAENSEMBLfileFormattedGRCh[set build]]" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkMPRAfiles --"
            puts "sort -k1,1 -k2,2n [set MPRAENSEMBLfileFormattedGRCh[set build]].tmp >> [set MPRAENSEMBLfileFormattedGRCh[set build]]"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $sortTmpFile
        file delete -force [set MPRAENSEMBLfileFormattedGRCh[set build]].tmp
    }
    
    
    # Delete the downloaded files
    if {[file exists $MPRARefSeqFileFormattedGRCh37] && [file exists $MPRAENSEMBLfileFormattedGRCh37] && [file exists $MPRARefSeqFileFormattedGRCh38] && [file exists $MPRAENSEMBLfileFormattedGRCh38]} {
        file delete -force $DownloadedMPRAfile_promoters
        file delete -force $DownloadedMPRAfile_enhancers
    }
    
    set necessaryMPRAfile "$regElementsDir/$g_AnnotSV(genomeBuild)/MPRA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"
    if {[file exists $necessaryMPRAfile]} {set g_AnnotSV(MPRAann) 1}
}





##################################################################################################################
##################################################################################################################
##################################################################################################################




## Annotate the SV bedFile with the regulatory elements files
## Creation of the g_re global variable
proc regulatoryElementsAnnotation {L_allGenesOverlapped} {
    
    global g_AnnotSV
    global g_re
    global g_genesReg
    global g_HI
    global g_TS
    global g_reDB
    
    # Intersect of the input SV bedfile with the regulatory elements files
    ######################################################################
    ## Sorted SV bed file: $g_AnnotSV(bedFile)
    regsub "(.annotated)?.tsv$" $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile) ".SV_RE_intersect.tmp" SV_RE_intersectBEDfile
    file delete -force $SV_RE_intersectBEDfile
    
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)"
    set regElementsDir "$extannDir/FtIncludedInSV/RegulatoryElements/$g_AnnotSV(genomeBuild)"
    set L_REfiles {}
    lappend L_REfiles "$regElementsDir/EA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"     ;#EnhancerAtlas
    lappend L_REfiles "$regElementsDir/GH_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"     ;#GeneHancer
    lappend L_REfiles "$regElementsDir/promoter_${g_AnnotSV(promoterSize)}bp_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed" ;# promoter
    lappend L_REfiles "$regElementsDir/miRTargetLink_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"     ;#miRTargetLink
    lappend L_REfiles "$regElementsDir/ABC_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"; #Activity-by-Contact (ABC) Model data
    lappend L_REfiles "$regElementsDir/MPRA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed"; #Massive parallel reporter assays (MPRA) data (Kircher lab)
    foreach reFile $L_REfiles {
        if {![file exists $reFile]} {continue}
        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $reFile -wa -wb >> $SV_RE_intersectBEDfile} Message]} {
            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(bedFile) -b $reFile -wa -wb >> $SV_RE_intersectBEDfile} Message]} {
                puts "-- regulatoryElementsAnnotation --"
                puts "$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $reFile -wa -wb >> $SV_RE_intersectBEDfile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
        }
    }
    
    # Definition of the g_genesReg($SVfromBED) variable (list all the regulated genes impacted by 1 SV)
    ###################################################################################################
    set L_allRegulatedGenes {} ;# used for exomiser
    if {![file exists $SV_RE_intersectBEDfile ] || [file size $SV_RE_intersectBEDfile] eq 0} {
        # No intersection between SV and regulatory elements
        ## Delete temporary file
        file delete -force $SV_RE_intersectBEDfile
    } else {
        set f [open "$SV_RE_intersectBEDfile"]
        while {! [eof $f]} {
            set L [gets $f]
            set Ls [split $L "\t"]
            # SVfromBED ("chrom\tstart\tend")
            set SVfromBED "[join [lrange $Ls 0 2] "\t"]"
            set L_genesFromTheLine [split [lindex $Ls end] ";"]
            lappend g_genesReg($SVfromBED) {*}$L_genesFromTheLine ;# regulated genes
            lappend L_allRegulatedGenes {*}$L_genesFromTheLine
            set db [lindex $Ls end-1]
            foreach g $L_genesFromTheLine {
                lappend g_reDB($SVfromBED,$g) $db
            }
        }
        close $f
        foreach SV [array names g_genesReg] {
            set g_genesReg($SV) [lsort -unique $g_genesReg($SV)]
        }
        foreach key [array names g_reDB] {
            set g_reDB($key) [lsort -unique $g_reDB($key)]
        }
        
        ## Delete temporary file
        if {$g_AnnotSV(REreport)} {
            regsub "(.annotated)?.tsv$" $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile) ".SV_RE_intersect.report" permanentSV_RE_intersectBEDfile
            file delete -force $permanentSV_RE_intersectBEDfile
            file rename $SV_RE_intersectBEDfile $permanentSV_RE_intersectBEDfile
        } else {
            file delete -force $SV_RE_intersectBEDfile
        }
    }
    
    ## Display
    ##########
    puts "...searching for SV overlaps with a gene or a regulatory elements"
    puts "\t...[llength $L_allGenesOverlapped] genes overlapped with an SV"
    set L_allRegulatedGenes [lsort -unique $L_allRegulatedGenes]
    puts "\t...[llength $L_allRegulatedGenes] genes regulated by a regulatory element which is overlapped with an SV\n"
    
    ## Preparation of the phenotype-driven analysis (PhenoGenius + Exomiser)
    ## (to be able to access to the exomiser score of a gene with [ExomiserAnnotation $gName "score"])
    ## (to be able to access to the PhenoGenius specificity of a gene with [PhenoGeniusCliAnnotation $gName "specificity"])
    #######################################################################################################################
    set L_allGenes $L_allGenesOverlapped
    lappend L_allGenes {*}$L_allRegulatedGenes
    set L_allGenes [lsort -unique $L_allGenes]
    if {$g_AnnotSV(PhenoGeniusCli)} {
        set L_NCBI_ID {}
        foreach g $L_allGenes {
            set NCBI_ID [searchforNCBIGeneID $g]
            if {$NCBI_ID ne ""} {
                lappend L_NCBI_ID $NCBI_ID
            }
        }
        set L_NCBI_ID [lsort -unique $L_NCBI_ID]
        runPhenoGeniusCli "$L_allGenes" "$L_NCBI_ID" "$g_AnnotSV(hpo)"
    }
    if {$g_AnnotSV(hpo) ne "" && $L_allGenes ne ""} {
        runExomiser "$L_allGenes" "$g_AnnotSV(hpo)"
    }
    
    ## HI/TS information for these regulated genes
    ## -> definition of g_HI($gene) and g_TS($gene)
    ###############################################
    set clingenDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/ClinGen"
    set ClinGenFileFormatted [lindex [glob -nocomplain "$clingenDir/*_ClinGenAnnotations.tsv*"] end]
    foreach g $L_allRegulatedGenes {
        set t($g) 1
    }
    if {$ClinGenFileFormatted ne ""} {
        if {[regexp ".gz$" $ClinGenFileFormatted]} {
            set f [open "| gzip -cd $ClinGenFileFormatted"]
        } else {
            set f [open "$ClinGenFileFormatted"]
        }
        while {! [eof $f]} {
            set L [gets $f]
            set Ls [split $L "\t"]
            set gene [lindex $Ls 0]
            if {[info exists t($gene)]} {
                set HI [lindex $Ls 1]; if {$HI ne "Not yet evaluated"} {set g_HI($gene) "$HI"}
                set TS [lindex $Ls 2]; if {$TS ne "Not yet evaluated"} {set g_TS($gene) "$TS"}
            }
        }
    }
    
    ## Resume RE information for each SV
    ## -> definition of g_re($SVfromBED)
    ####################################
    foreach SV [array names g_genesReg] {
        set g_re($SV) ""
        set re_priority($SV) ""
        set re_other($SV) ""
        set re_noann($SV) ""
        foreach gName "$g_genesReg($SV)" {
            if {$g_AnnotSV(REselect2)} {
                # AnnotSV restrict the report of the regulated genes to the ones not present in "Gene_name".
                if {[lsearch -exact $L_allGenesOverlapped $gName] ne "-1"} {continue}
            }
            set HI ""
            catch {set HI "$g_HI($gName)"}
            set TS ""
            catch {set TS "$g_TS($gName)"}
            if {$g_AnnotSV(PhenoGeniusCli)} {
                set PhenoGeniusSpecificity "[PhenoGeniusCliAnnotation $gName "specificity"]"
            } else {set PhenoGeniusSpecificity ""}
            if {$g_AnnotSV(hpo) ne ""} {
                set exomiserScore "[ExomiserAnnotation $gName "score"]"
            } else {set exomiserScore ""}
            
            set lAnn {}
            set priority 0
            if {$g_AnnotSV(REselect1)} {
                # By default, only the genes entering in one of the following categories are reported:
                #  - OMIM morbid genes
                #  - HI genes (ClinGen HI = 3)
                #  - TS genes (ClinGen TS = 3)
                #  - Phenotype matched genes (PhenoGenius specificity = "A" or Exomiser gene score > 0.7)
                #  - User candidate genes
                if {$HI eq "3"} {lappend lAnn "HI=$HI"}
                if {$TS eq "3"} {lappend lAnn "TS=$TS"}
                if {$PhenoGeniusSpecificity eq "A"} {lappend lAnn "PG=A"; set priority 1}
                if {$exomiserScore ne "" && $exomiserScore > 0.7} {lappend lAnn "EX=$exomiserScore"; set priority 1}
                if {[isMorbid $gName]} {lappend lAnn "morbid"}
                if {[isCandidate $gName]} {lappend lAnn "candidate"}
                if {$lAnn eq ""} {
                    continue
                } else {
                    lappend lAnn "RE=[join $g_reDB($SV,$gName) "+"]"
                }
            } else {
                if {$HI ne ""} {lappend lAnn "HI=$HI"}
                if {$TS ne ""} {lappend lAnn "TS=$TS"}
                if {$PhenoGeniusSpecificity ne ""} {lappend lAnn "PG=A"}
                if {$exomiserScore ne "" && $exomiserScore ne "0.0000" && $exomiserScore ne "-1.0"} {lappend lAnn "EX=$exomiserScore"}
                if {[isMorbid $gName]} {lappend lAnn "morbid"}
                if {[isCandidate $gName]} {lappend lAnn "candidate"}
                lappend lAnn "RE=[join $g_reDB($SV,$gName) "+"]"
            }
            if {$lAnn ne ""} {
                if {$priority} {
                    lappend re_priority($SV) "$gName ([join $lAnn "/"])"
                } else {
                    lappend re_other($SV) "$gName ([join $lAnn "/"])"
                }
            } else {
                lappend re_noann($SV) "$gName"
            }
        }
        
        # We prioritarily keep RE with "PhenoGenius specificity = "A" or Exomiser gene score > 0.7" (for the ranking)
        if {$re_priority($SV) ne ""} {
            set g_re($SV) $re_priority($SV)
        } elseif {$re_other($SV) ne ""} {
            lappend g_re($SV) {*}$re_other($SV)
        } elseif {$re_noann($SV) ne ""} {
            lappend g_re($SV) {*}$re_noann($SV)
        }
        
        # AnnotSV restricts the number of overlapping reported features to 50
        if {[llength $g_re($SV)] > 50} {
            set g_re($SV) "[join [lrange $g_re($SV) 0 49] ";"]..."
        } else {
            set g_re($SV) [join $g_re($SV) ";"]
        }
    }
    
    return
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-repeat.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


## - Check if the following file exist:
#    - 'date'_Repeat.bed
proc checkRepeatFile {} {
    
    global g_AnnotSV
    
    ## Check if the repeat file has been downloaded then formatted
    #############################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations"
    set repeatFileDownloaded [glob -nocomplain "$extannDir/Repeat/$g_AnnotSV(genomeBuild)/Repeat.bed"]
    set repeatFileFormatted [glob -nocomplain "$extannDir/Repeat/$g_AnnotSV(genomeBuild)/*_Repeat.sorted.bed"]
    
    if {$repeatFileDownloaded eq "" && $repeatFileFormatted eq ""} {
        # No Repeat annotation
        set g_AnnotSV(repeatAnn) 0
        return
    } else {
        # Repeat annotation
        set g_AnnotSV(repeatAnn) 1
        # Check if the user asked for these annotations in the configfile
        set test 0
        foreach col "Repeat_coord_left Repeat_type_left Repeat_coord_right Repeat_type_right" {
            if {[lsearch -exact "$g_AnnotSV(outputColHeader)" $col] ne -1} {set test 1;break}
        }
        if {$test eq 0} {set g_AnnotSV(repeatAnn) 0; return}
    }
    
    if {[llength $repeatFileFormatted]>1} {
        puts "Several repeat files exist:"
        puts "$repeatFileFormatted"
        puts "Keep only one: [lindex $repeatFileFormatted end]\n"
        foreach repeat [lrange $repeatFileFormatted 0 end-1] {
            file rename -force $repeat $repeat.notused
        }
        return
    }
    
    if {$repeatFileFormatted eq ""} {
        # The downloaded file exist but not the formatted.
        set repeatFileFormatted "$extannDir/Repeat/$g_AnnotSV(genomeBuild)/[clock format [clock seconds] -format "%Y%m%d"]_Repeat.sorted.bed"
        file delete -force $repeatFileFormatted.tmp
        puts "\t...Repeats configuration ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        puts "\t\t...creation of $repeatFileFormatted"
        puts "\t\t   (done only once during the first Repeats annotation)"
        
        set f [open $repeatFileDownloaded]
        set i 0
        set L_Text {}
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            regsub "^chr" $L "" L
            set chrom [lindex $L 0]
            if {[lsearch -exact {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 X Y M MT} $chrom] eq -1} {continue}
            lappend L_Text "$L"
            if {$i>500000} {
                WriteTextInFile [join $L_Text "\n"] $repeatFileFormatted.tmp
                set L_Text {}
                set i 0
            }
        }
        WriteTextInFile [join $L_Text "\n"] $repeatFileFormatted.tmp
        
        # Sorting of the bedfile:
        # Intersection with very large files can cause trouble with excessive memory usage.
        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n $repeatFileFormatted.tmp > $repeatFileFormatted" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkRepeatFile --"
            puts "sort -k1,1 -k2,2n $repeatFileFormatted.tmp > $repeatFileFormatted"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $sortTmpFile
        file delete -force $repeatFileFormatted.tmp
        file delete -force $repeatFileDownloaded
        
        close $f
        
        return
    }
}



proc RepeatAnnotation {BreakpointChrom BreakpointPos} {
    
    global g_AnnotSV
    global g_Repeat_type
    global g_Repeat_coord
    global g_Repeat
    
    
    # headerOutput "Repeat_coord_left Repeat_type_left" or "Repeat_coord_right and Repeat_type_right"
    # (RepeatAnnotation is executed for each breakpoint)
    set g_Repeat(Empty) "\t"
    
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations"
    set repeatFileFormatted [glob -nocomplain "$extannDir/Repeat/$g_AnnotSV(genomeBuild)/*_Repeat.sorted.bed"]
    
    if {![info exists g_Repeat(DONE)]} {
        
        # Creation of a bedfile with all breakpoints +/- 100 bp:
        # => done during the GC content annotation (if "GC content" annotation is in the output (user defined))
        # FORMAT:  chrom   'breakpoint-100'   'breakpoint+100'   'breakpoint'
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".breakpoints.bed" tmpBreakpointsFile
        set tmpBreakpointsFile "$g_AnnotSV(outputDir)/[file tail $tmpBreakpointsFile]"
        if {![file exists $tmpBreakpointsFile]} {
            file delete -force $tmpBreakpointsFile.tmp
            set i 0
            set L_LinesToWrite {}
            set f [open $g_AnnotSV(bedFile)]
            while {![eof $f]} {
                set L [gets $f]
                if {$L eq ""} {continue}
                set Ls [split $L "\t"]
                set chrom [lindex $Ls 0]
                set start [lindex $Ls 1]
                set end [lindex $Ls 2]
                set start_breakpoint1 [expr $start-100]; if {$start_breakpoint1 < 0} {set start_breakpoint1 0}
                set end_breakpoint1 [expr $start+100]  ; if {$end_breakpoint1 < 0} {set end_breakpoint1 0}
                set start_breakpoint2 [expr $end-100]  ; if {$start_breakpoint2 < 0} {set start_breakpoint2 0}
                set end_breakpoint2 [expr $end+100]    ; if {$end_breakpoint2 < 0} {set end_breakpoint2 0}
                lappend L_LinesToWrite "$chrom\t$start_breakpoint1\t$end_breakpoint1\t$start"
                lappend L_LinesToWrite "$chrom\t$start_breakpoint2\t$end_breakpoint2\t$end"
                incr i
                if {$i>100000} {
                    WriteTextInFile [join [lsort -unique $L_LinesToWrite] "\n"] $tmpBreakpointsFile.tmp
                    set L_LinesToWrite {}
                    set i 0
                }
            }
            close $f
            WriteTextInFile [join [lsort -unique $L_LinesToWrite] "\n"] $tmpBreakpointsFile.tmp
            unset L_LinesToWrite
            
            # Sorting of the bedfile:
            # Intersection with very large files can cause trouble with excessive memory usage.
            # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
            set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
            ReplaceTextInFile "#!/bin/bash" $sortTmpFile
            WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
            WriteTextInFile "export LC_ALL=C" $sortTmpFile
            WriteTextInFile "sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile" $sortTmpFile
            file attributes $sortTmpFile -permissions 0755
            if {[catch {eval exec bash $sortTmpFile} Message]} {
                puts "-- RepeatAnnotation, sort --"
                puts "sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
            file delete -force $sortTmpFile
            file delete -force $tmpBreakpointsFile.tmp
            
        }
        
        # Intersect
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.Repeat.bed" tmpRepeatFile
        set tmpRepeatFile "$g_AnnotSV(outputDir)/[file tail $tmpRepeatFile]"
        file delete -force $tmpRepeatFile
        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $repeatFileFormatted -wa -wb > $tmpRepeatFile} Message]} {
            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpBreakpointsFile -b $repeatFileFormatted -wa -wb > $tmpRepeatFile} Message]} {
                puts "-- RepeatAnnotation, intersect --"
                puts "$g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $repeatFileFormatted -wa -wb > $tmpRepeatFile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
        }
        
        # Loading g_Repeat for each SV breakpoint
        set f [open $tmpRepeatFile]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            
            set chrom [lindex $Ls 0]
            set breakpoint [lindex $Ls 3]
            set repeatStart [lindex $Ls 5]
            set repeatEnd [lindex $Ls 6]
            set repeatType [lindex $Ls 7]
            
            lappend g_Repeat_coord($chrom,$breakpoint) "$chrom:$repeatStart-$repeatEnd"
            lappend g_Repeat_type($chrom,$breakpoint) "$repeatType"
        }
        
        set g_Repeat(DONE) 1
        file delete -force $tmpRepeatFile
        
    }
    
    if {[info exist g_Repeat_coord($BreakpointChrom,$BreakpointPos)]} {
        return "[join $g_Repeat_coord($BreakpointChrom,$BreakpointPos) ";"]\t[join $g_Repeat_type($BreakpointChrom,$BreakpointPos) ";"]"
    } else {
        return $g_Repeat(Empty)
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-segdup.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


## - Check if the downloaded "SegDup.bed" file or the formatted "*_SegDup.sorted.bed" file exist
proc checkSegDupFile {} {
    
    global g_AnnotSV
    
    ## Check if the SegDup file has been downloaded then formatted
    #############################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations"
    set segdupFileDownloaded [glob -nocomplain "$extannDir/SegDup/$g_AnnotSV(genomeBuild)/SegDup.bed"]
    set segdupFileFormatted [glob -nocomplain "$extannDir/SegDup/$g_AnnotSV(genomeBuild)/*_SegDup.sorted.bed"]
    
    if {$segdupFileDownloaded eq "" && $segdupFileFormatted eq ""} {
        # No SegDup annotation
        set g_AnnotSV(segdupAnn) 0
        return
    } else {
        # SegDup annotation
        set g_AnnotSV(segdupAnn) 1
        # Check if the user asked for these annotations in the configfile
        set test 0
        foreach col "SegDup_left SegDup_right" {
            if {[lsearch -exact "$g_AnnotSV(outputColHeader)" $col] ne -1} {set test 1;break}
        }
        if {$test eq 0} {set g_AnnotSV(segdupAnn) 0; return}
    }
    
    if {[llength $segdupFileFormatted]>1} {
        puts "Several segmental duplication files exist:"
        puts "$segdupFileFormatted"
        puts "Keep only one: [lindex $segdupFileFormatted end]\n"
        foreach segdup [lrange $segdupFileFormatted 0 end-1] {
            file rename -force $segdup $segdup.notused
        }
        return
    }
    
    if {$segdupFileFormatted eq ""} {
        # The downloaded file exist but not the formatted.
        set segdupFileFormatted "$extannDir/SegDup/$g_AnnotSV(genomeBuild)/[clock format [clock seconds] -format "%Y%m%d"]_SegDup.sorted.bed"
        puts "\t...creation of the \"[file tail $segdupFileFormatted]\" file ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])\n\t   (done only once)"
        ReplaceTextInFile "#Chrom\tStart\tEnd\tSegDup" $segdupFileFormatted.tmp
        
        set f [open $segdupFileDownloaded]
        set i 0
        set L_Text {}
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            if {[regexp "^#" $L]} {continue}
            
            set Ls [split $L "\t"]
            regsub "chr" [lindex $Ls 0] "" chrom
            set start [lindex $Ls 1]
            set end [lindex $Ls 2]
            set IDsegdup "${chrom}:${start}-${end}"
            
            lappend L_Text "$chrom\t$start\t$end\t$IDsegdup"
            if {$i>500000} {
                WriteTextInFile [join $L_Text "\n"] $segdupFileFormatted.tmp
                set L_Text {}
                set i 0
            }
            incr i
        }
        WriteTextInFile [join $L_Text "\n"] $segdupFileFormatted.tmp
        
        # Sorting of the bedfile:
        # Intersection with very large files can cause trouble with excessive memory usage.
        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n $segdupFileFormatted.tmp > $segdupFileFormatted" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkSegDupFile --"
            puts "sort -k1,1 -k2,2n $segdupFileFormatted.tmp > $segdupFileFormatted"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        file delete -force $sortTmpFile
        file delete -force $segdupFileFormatted.tmp
        file delete -force $segdupFileDownloaded
        
        close $f
        
        return
    }
}



proc SegDupAnnotation {BreakpointChrom BreakpointPos} {
    
    global g_AnnotSV
    global g_SegDup_type
    global g_SegDup_coord
    global g_SegDup
    
    
    # headerOutput "SegDup_left" or "SegDup_right"
    # (SegDupAnnotation is executed for each breakpoint)
    set g_SegDup(Empty) ""
    
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations"
    set segdupFileFormatted [glob -nocomplain "$extannDir/SegDup/$g_AnnotSV(genomeBuild)/*_SegDup.sorted.bed"]
    
    if {![info exists g_SegDup(DONE)]} {
        
        # Creation of a bedfile with all breakpoints +/- 100 bp:
        # => done during the GC content annotation (if "GC content" annotation is in the output (user defined))
        # FORMAT:  chrom   'breakpoint-100'   'breakpoint+100'   'breakpoint'
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".breakpoints.bed" tmpBreakpointsFile
        set tmpBreakpointsFile "$g_AnnotSV(outputDir)/[file tail $tmpBreakpointsFile]"
        if {![file exists $tmpBreakpointsFile]} {
            file delete -force $tmpBreakpointsFile.tmp
            set i 0
            set L_LinesToWrite {}
            set f [open $g_AnnotSV(bedFile)]
            while {![eof $f]} {
                set L [gets $f]
                if {$L eq ""} {continue}
                set Ls [split $L "\t"]
                set chrom [lindex $Ls 0]
                set start [lindex $Ls 1]
                set end [lindex $Ls 2]
                set start_breakpoint1 [expr $start-100]; if {$start_breakpoint1 < 0} {set start_breakpoint1 0}
                set end_breakpoint1 [expr $start+100]  ; if {$end_breakpoint1 < 0} {set end_breakpoint1 0}
                set start_breakpoint2 [expr $end-100]  ; if {$start_breakpoint2 < 0} {set start_breakpoint2 0}
                set end_breakpoint2 [expr $end+100]    ; if {$end_breakpoint2 < 0} {set end_breakpoint2 0}
                lappend L_LinesToWrite "$chrom\t$start_breakpoint1\t$end_breakpoint1\t$start"
                lappend L_LinesToWrite "$chrom\t$start_breakpoint2\t$end_breakpoint2\t$end"
                incr i
                if {$i>100000} {
                    WriteTextInFile [join [lsort -unique $L_LinesToWrite] "\n"] $tmpBreakpointsFile.tmp
                    set L_LinesToWrite {}
                    set i 0
                }
            }
            close $f
            WriteTextInFile [join [lsort -unique $L_LinesToWrite] "\n"] $tmpBreakpointsFile.tmp
            unset L_LinesToWrite
            
            # Sorting of the bedfile:
            # Intersection with very large files can cause trouble with excessive memory usage.
            # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
            set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
            ReplaceTextInFile "#!/bin/bash" $sortTmpFile
            WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
            WriteTextInFile "export LC_ALL=C" $sortTmpFile
            WriteTextInFile "sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile" $sortTmpFile
            file attributes $sortTmpFile -permissions 0755
            if {[catch {eval exec bash $sortTmpFile} Message]} {
                puts "-- SegDupAnnotation, sort --"
                puts "sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
            file delete -force $sortTmpFile
            file delete -force $tmpBreakpointsFile.tmp
            
        }
        
        # Intersect
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.SegDup.bed" tmpSegDupFile
        set tmpSegDupFile "$g_AnnotSV(outputDir)/[file tail $tmpSegDupFile]"
        file delete -force $tmpSegDupFile
        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $segdupFileFormatted -wa -wb > $tmpSegDupFile} Message]} {
            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpBreakpointsFile -b $segdupFileFormatted -wa -wb > $tmpSegDupFile} Message]} {
                puts "-- SegDupAnnotation, intersect --"
                puts "$g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $segdupFileFormatted -wa -wb > $tmpSegDupFile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
        }
        
        # Loading g_SegDup for each SV breakpoint
        set f [open $tmpSegDupFile]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            
            set chrom [lindex $Ls 0]
            set breakpoint [lindex $Ls 3]
            #set segdupStart [lindex $Ls 5]
            #set segdupEnd [lindex $Ls 6]
            #set segdupCoord [lindex $Ls 7]
            
            lappend g_SegDup_coord($chrom,$breakpoint) "[lindex $Ls 7]"
        }
        
        set g_SegDup(DONE) 1
        file delete -force $tmpSegDupFile
    }
    
    if {[info exist g_SegDup_coord($BreakpointChrom,$BreakpointPos)]} {
        return "[join $g_SegDup_coord($BreakpointChrom,$BreakpointPos) ";"]"
    } else {
        return $g_SegDup(Empty)
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-tad.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


## - Check if the following TAD files has been downloaded:
#    - ENC*.bed
#
## - Check and create if necessary the 'date'_boundariesTAD.sorted.bed file
##   Header:
##   Chrom_boundary  Start_boundary  End_boundary  ENCODE_experiment  TAD_coordinates
##
proc checkTADfiles {} {
    
    global g_AnnotSV
    
    
    ## Check if TAD files has been downloaded then formatted
    #######################################################
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)"
    set TADfilesDownloaded [glob -nocomplain "$extannDir/FtIncludedInSV/TAD/$g_AnnotSV(genomeBuild)/ENC*.bed.gz"]
    set boundariesTADfileFormatted [glob -nocomplain "$extannDir/FtIncludedInSV/TAD/$g_AnnotSV(genomeBuild)/*_boundariesTAD.sorted.bed"]
    
    if {$TADfilesDownloaded eq "" && $boundariesTADfileFormatted eq ""} {
        # No TAD annotation (with extAnn procedure)
        set g_AnnotSV(tadAnn) 0
        return
    } else {
        set g_AnnotSV(tadAnn) 1
        # Check if the user asked for these annotations in the configfile
        set test 0
        foreach col "TAD_coordinate ENCODE_experiment" {
            if {[lsearch -exact "$g_AnnotSV(outputColHeader)" $col] ne -1} {set test 1;break}
        }
        if {$test eq 0} {set g_AnnotSV(tadAnn) 0; return}
    }
    
    if {[llength $boundariesTADfileFormatted]>1} {
        puts "Several TAD files exist:"
        puts "$boundariesTADfileFormatted"
        puts "Keep only one: [lindex $boundariesTADfileFormatted end]\n"
        foreach tad [lrange $boundariesTADfileFormatted 0 end-1] {
            file rename -force $tad $tad.notused
        }
        return
    }
    
    if {$boundariesTADfileFormatted eq ""} {
        # The downloaded file exist but not the formatted.
        ## Create:
        ##   - 'date'_boundariesTAD.sorted.bed   ; # Header: chr boundaryStart boundaryEnd ENCODEexperiments correspondingTADs
        set boundariesTADfileFormatted "$extannDir/FtIncludedInSV/TAD/$g_AnnotSV(genomeBuild)/[clock format [clock seconds] -format "%Y%m%d"]_boundariesTAD.sorted.bed"
        
        puts "\t...TAD configuration"
        
        puts "\t\t...creation of $boundariesTADfileFormatted"
        puts "\t\t   (done only once during the first boundaries TAD annotation)"
        
        foreach TADfile [glob -nocomplain "$extannDir/FtIncludedInSV/TAD/$g_AnnotSV(genomeBuild)/ENC*.bed.gz"] {
            regsub -nocase ".bed$" $TADfile "" ENCODEexperiment
            regsub ".*/" $ENCODEexperiment "" ENCODEexperiment
            foreach L [LinesFromGZFile $TADfile] {
                if {[regexp "^#" $L]} {continue}
                regsub "chr" [lindex $L 0] "" chrom
                set TADstart [lindex $L 1]
                set TADend [lindex $L 2]
                if {[regexp "___boundary" $L]} {
                    set boundarieStart $TADstart
                    set boundariesEnd [expr $TADstart+40000]
                } else {
                    set boundarieStart [expr $TADstart-40000]
                    set boundariesEnd $TADstart
                    set TADstart $boundarieStart
                    set TADend [expr $TADend+40000]
                }
                # BED format: chromStart - The first base in a chromosome is numbered 0.
                if {$boundarieStart < 0} {set boundarieStart 0}
                if {$boundariesEnd <= $boundarieStart} {continue}
                lappend experiment($chrom\t$boundarieStart\t$boundariesEnd) "$ENCODEexperiment"
                lappend TAD($chrom\t$boundarieStart\t$boundariesEnd) "$chrom:$TADstart-$TADend"
                lappend L_allLines($chrom) "$boundarieStart\t$boundariesEnd"
            }
        }
        
        foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {
            if {![info exists L_allLines($chrom)]} {continue}
            foreach bounds [lsort -command AscendingSortOnElement0 [lsort -command AscendingSortOnElement1 [lsort -unique $L_allLines($chrom)]]] {
                WriteTextInFile "$chrom\t$bounds\t[join [lsort -unique $experiment($chrom\t$bounds)] ","]\t[join [lsort -unique $TAD($chrom\t$bounds)] ","]" $boundariesTADfileFormatted.tmp
            }
        }
        
        # Sorting of the bedfile:
        # Intersection with very large files can cause trouble with excessive memory usage.
        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
        set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
        ReplaceTextInFile "#!/bin/bash" $sortTmpFile
        WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
        WriteTextInFile "export LC_ALL=C" $sortTmpFile
        WriteTextInFile "sort -k1,1 -k2,2n $boundariesTADfileFormatted.tmp > $boundariesTADfileFormatted" $sortTmpFile
        file attributes $sortTmpFile -permissions 0755
        if {[catch {eval exec bash $sortTmpFile} Message]} {
            puts "-- checkTADfiles --"
            puts "sort -k1,1 -k2,2n $boundariesTADfileFormatted.tmp > $boundariesTADfileFormatted"
            puts "$Message"
            puts "Exit with error"
            exit 2
        }
        
        file delete -force $sortTmpFile
        file delete -force $boundariesTADfileFormatted.tmp
        
        foreach TADfile $TADfilesDownloaded {
            file delete -force $TADfile
        }
        
    }
}


proc TADannotation {SVchrom SVstart SVend L_i} {
    
    global g_AnnotSV
    global tadText
    
    
    set extannDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)"
    set boundariesTADfileFormatted [glob -nocomplain "$extannDir/FtIncludedInSV/TAD/$g_AnnotSV(genomeBuild)/*_boundariesTAD.sorted.bed"]
    
    if {![info exists tadText(DONE)]} {
        
        # headerOutput "TAD_coordinate\tENCODE_experiment"
        set L_tadText(Empty) "{} {}"
        foreach i $L_i {
            lappend tadText(Empty) "[lindex $L_tadText(Empty) $i]"
        }
        set tadText(Empty) [join $tadText(Empty) "\t"]
        
        # Intersect
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.tad" tmpFile
        set tmpFile "$g_AnnotSV(outputDir)/[file tail $tmpFile]"
        file delete -force $tmpFile
        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $boundariesTADfileFormatted -wa -wb > $tmpFile} Message]} {
            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(bedFile) -b $boundariesTADfileFormatted -wa -wb > $tmpFile} Message]} {
                puts "-- TADannotation --"
                puts "$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $boundariesTADfileFormatted -wa -wb > $tmpFile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
        }
        # Parse
        set f [open $tmpFile]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            set SVtoAnn_chrom [lindex $Ls 0]
            set SVtoAnn_start [lindex $Ls 1]
            set SVtoAnn_end   [lindex $Ls 2]
            
            set TAD_coordinates  [lindex $Ls end]
            set TAD_ENCODEexperiments [lindex $Ls end-1]
            set boundary_end [lindex $Ls end-2]
            set boundary_start [lindex $Ls end-3]
            
            # Select:
            # - TAD boundaries that share > XX % length with the SV to annotate
            # - TAD boundaries overlapping a SV that is an insertion
            set boundary_length [expr {$boundary_end-$boundary_start}]
            set SVtoAnn_length [expr {$SVtoAnn_end - $SVtoAnn_start}]
            if {$SVtoAnn_length<=1} {
                # SV to annotate is an insertion
                set SVtoAnn_length 1
            } else {
                # SV to annotate is not an insertion
                if {$SVtoAnn_start < $boundary_start} {
                    set overlap_start $boundary_start
                } else {
                    set overlap_start $SVtoAnn_start
                }
                if {$SVtoAnn_end < $boundary_end} {
                    set overlap_end $SVtoAnn_end
                } else {
                    set overlap_end $boundary_end
                }
                set overlap_length [expr {$overlap_end - $overlap_start}]
                
                # Keeping only TAD with > 100% overlap with the SV
                if {[expr {$overlap_length*100.0/$boundary_length}] < 100} {continue}
                # No reciprocal overlap used for TAD (it would not make sense)
            }
            
            lappend L_experiments($SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end) {*}[split $TAD_ENCODEexperiments ","]
            lappend L_TADcoordinates($SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end) {*}[split $TAD_coordinates ","]
            
        }
        
        
        # Loading TAD final annotation for each SV
        foreach SVtoAnn [array names L_experiments] {
            # Very large SV (e.g. 30Mb) can overlap many TAD (e.g. more than 2600).
            # e.g. 1:2806107-107058351
            # So the “full” line can appear truncated in the output if visualized in a spreadsheet.
            # In order to avoid such embarrassing glitch, AnnotSV gives access to the list of the 20 first TAD coordinates and their associated ENCODE experiments.
            set L_tadText($SVtoAnn) ""
            lappend L_tadText($SVtoAnn) [join [lrange [lsort -unique $L_TADcoordinates($SVtoAnn)] 0 20] ";"]
            lappend L_tadText($SVtoAnn) [join [lrange [lsort -unique $L_experiments($SVtoAnn)] 0 20] ":"]
            
            # Keep only the user requested columns (defined in the configfile)
            set tadText($SVtoAnn) ""
            foreach i $L_i {
                lappend tadText($SVtoAnn) "[lindex $L_tadText($SVtoAnn) $i]"
            }
            set tadText($SVtoAnn) [join $tadText($SVtoAnn) "\t"]
        }
        catch {unset L_tadText}
        set tadText(DONE) 1
        file delete -force $tmpFile
    }
    
    if {[info exist tadText($SVchrom,$SVstart,$SVend)]} {
        return $tadText($SVchrom,$SVstart,$SVend)
    } else {
        return $tadText(Empty)
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-userBED.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


# Check the Users BED regions annotations files (from .../Annotations_$g_AnnotSV(organism)/Users/GRCh*/*/*.bed)
# Create : .../Annotations_$g_AnnotSV(organism)/Users/GRCh*/*/*.formatted.sorted
# (After the formatting step, the copy and/or linked users file(s) are deleted)
proc checkUsersBED {} {
    
    global g_AnnotSV
    global g_numberOfAnnotationCol
    
    set userBEDdir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Users/$g_AnnotSV(genomeBuild)"
    foreach userBEDfile [glob -nocomplain $userBEDdir/*/*.bed] {
        # Create a formatted and sorted bedfile if it doesn't exist yet
        # and create a *.header.tsv file associated
        regsub -nocase "(.formatted.sorted)?.bed$" $userBEDfile ".bed" notFormattedFile
        regsub -nocase "(.formatted.sorted)?.bed$" $userBEDfile ".formatted.bed" formattedFile
        regsub -nocase "(.formatted.sorted)?.bed$" $userBEDfile ".formatted.sorted.bed" formattedSortedFile
        regsub -nocase ".bed$" $notFormattedFile ".header.tsv" userHeaderFile
        if {[file exists $notFormattedFile]} {
            # - Create the formatted bedfile
            # - Check the *.header.tsv file existence and create it if it doesn't exist yet
            checkBed $notFormattedFile [file dirname $notFormattedFile]
            # Create the formatted and sorted bedfile
            #   Sorting of the bedfile:
            #   Intersection with very large files can cause trouble with excessive memory usage.
            #   A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
            set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
            ReplaceTextInFile "#!/bin/bash" $sortTmpFile
            WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
            WriteTextInFile "export LC_ALL=C" $sortTmpFile
            WriteTextInFile "sort -k1,1 -k2,2n $formattedFile > $formattedSortedFile" $sortTmpFile
            file attributes $sortTmpFile -permissions 0755
            if {[catch {eval exec bash $sortTmpFile} Message]} {
                puts "-- checkUsersBED --"
                puts "sort -k1,1 -k2,2n $formattedFile > $formattedSortedFile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
            file delete -force $sortTmpFile
            file delete -force $formattedFile
        }
        
        # Check that the bed and header files have the same number of columns (and more than 3)
        set L_all_ColName_from_header   [split [FirstLineFromFile $userHeaderFile] "\t"]
        set L_ann_ColName_from_header [lrange $L_all_ColName_from_header 3 end]
        set Ls_BED      [split [FirstLineFromFile $formattedSortedFile] "\t"]
        set nColHeader [llength $L_all_ColName_from_header]
        set nColBed    [llength $Ls_BED]
        if {$nColHeader ne $nColBed} {
            puts "WARNING: [file tail $userHeaderFile] has $nColHeader fields, but $nColBed were expected. Header bed file not used.\n"
            file rename -force $userHeaderFile $userHeaderFile.bed
            WriteTextInFile "[join [lrepeat $nColBed ""] "\t"]" $userHeaderFile
            set L_ann_ColName_from_header [expr {$nColBed-3}]
        } elseif {$nColHeader <=3} {
            puts "WARNING: [file tail $userHeaderFile] has $nColHeader fields. More than 3 are expected. Header bed file not used.\n"
            file rename -force $userHeaderFile $userHeaderFile.bed
            WriteTextInFile "[join [lrepeat $nColBed ""] "\t"]" $userHeaderFile
            set L_ann_ColName_from_header [expr {$nColBed-3}]
        }
        
        # Number of annotation columns in the user bedfile (without the 3 columns "chrom start end")
        set g_numberOfAnnotationCol($formattedSortedFile) [llength $L_ann_ColName_from_header]
    }
}


# Return the annotation of a SV with the userBED file
# formattedSortedUserBEDfile: "chrom start end" (il n'y a que 3 colonnes, pas de col d'annotations)
proc userBEDannotation {formattedSortedUserBEDfile SVchrom SVstart SVend {use3points 1}} {
    
    global g_AnnotSV
    global g_numberOfAnnotationCol
    global userBEDtext
    
    if {![info exists userBEDtext($formattedSortedUserBEDfile,DONE)]} {
        
        set userBEDtext($formattedSortedUserBEDfile,Empty) ""
        
        regsub -nocase ".formatted.sorted.bed$" $formattedSortedUserBEDfile ".header.tsv" userHeaderFile
        
        # no intersection with the SV
        append userBEDtext($formattedSortedUserBEDfile,Empty) "\t[join [lrepeat $g_numberOfAnnotationCol($formattedSortedUserBEDfile) ""] "\t"]"
        
        # NOTE: $g_AnnotSV(bedFile) = formatted and sorted bedfile!
        regsub -nocase ".formatted.sorted.bed$" $g_AnnotSV(bedFile) ".intersect.userBED" tmpFile
        set tmpFile "$g_AnnotSV(outputDir)/[file tail $tmpFile]"
        file delete -force $tmpFile
        
        # Intersect
        ###########
        if {[regexp "FtIncludedInSV|SVincludedInFt|AnyOverlap" $formattedSortedUserBEDfile]} {
            # Intersect (for "FtIncludedInSV", "SVincludedInFt" and "AnyOverlap")
            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(fullAndSplitBedFile) -b $formattedSortedUserBEDfile -wa -wb > $tmpFile} Message]} {
                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(fullAndSplitBedFile) -b $formattedSortedUserBEDfile -wa -wb > $tmpFile} Message]} {
                    puts "-- userBEDannotation --"
                    puts "$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(fullAndSplitBedFile) -b $formattedSortedUserBEDfile -wa -wb > $tmpFile"
                    puts "$Message"
                    puts "Exit with error"
                    exit 2
                }
            }
        } elseif {[regexp "BNDproximity" $formattedSortedUserBEDfile]} {
            # Intersect (for "BNDproximity")
            ## <=> At this step, keeping all close user regions
            if {[catch {exec $g_AnnotSV(bedtools) window -a $g_AnnotSV(fullAndSplitBedFile) -b $formattedSortedUserBEDfile -w $g_AnnotSV(breakpointProximity) > $tmpFile} Message]} {
                puts "-- userBEDannotation --"
                puts "$g_AnnotSV(bedtools) window -a $g_AnnotSV(fullAndSplitBedFile) -b $formattedSortedUserBEDfile -w $g_AnnotSV(breakpointProximity) > $tmpFile"
                puts "$Message"
                puts "Exit with error"
                exit 2
            }
        }
        
        # Parse
        set f [open $tmpFile]
        while {![eof $f]} {
            set L [gets $f]
            if {$L eq ""} {continue}
            set Ls [split $L "\t"]
            
            set SVtoAnn_chrom [lindex $Ls 0]
            set SVtoAnn_start [lindex $Ls 1]
            set SVtoAnn_end   [lindex $Ls 2]
            
            set userFt_end [lindex $Ls end-$g_numberOfAnnotationCol($formattedSortedUserBEDfile)]
            set userFt_start [lindex $Ls end-[expr {$g_numberOfAnnotationCol($formattedSortedUserBEDfile)+1}]]
            
            # Select:
            #########
            # - userBED that share > XX% length with the SV to annotate
            # (doesn't select the INSERTION)
            set userFt_length [expr {$userFt_end-$userFt_start}]
            set SVtoAnn_length [expr {$SVtoAnn_end - $SVtoAnn_start}]
            # The user SV is an insertion or a breakpoint
            if {$userFt_length<1} {
                set userFt_length 1
            }
            # The SV to annotate is an insertion or a breakpoint
            if {$SVtoAnn_length<1} {
                set SVtoAnn_length 1
            }
            
            if {$SVtoAnn_start < $userFt_start} {
                set overlap_start $userFt_start
            } else {
                set overlap_start $SVtoAnn_start
            }
            if {$SVtoAnn_end < $userFt_end} {
                set overlap_end $SVtoAnn_end
            } else {
                set overlap_end $userFt_end
            }
            set overlap_length [expr {$overlap_end - $overlap_start}]
            
            if {[regexp "FtIncludedInSV" $formattedSortedUserBEDfile]} {
                ## FtIncludedInSV:
                ## <=> Keeping only user regions (userRegion=Ft=Feature) included in the SV to annotate
                ## <=> Keeping only Ft with >= 100% ("overlap" option default) overlap with the SV
                if {[expr {$overlap_length*100.0/$userFt_length}] < $g_AnnotSV(overlap)} {continue}
            } elseif {[regexp "SVincludedInFt" $formattedSortedUserBEDfile]} {
                ## SVincludedInFt:
                ## <=> Keeping user regions respecting the overlaps (reciprocal or not reciprocal)
                if {[expr {$overlap_length*100.0/$SVtoAnn_length}] < $g_AnnotSV(overlap)} {continue}
                if {$g_AnnotSV(reciprocal)} {
                    if {[expr {$overlap_length*100.0/$userFt_length}] < $g_AnnotSV(overlap)} {continue}
                }
            } elseif {[regexp "AnyOverlap" $formattedSortedUserBEDfile]} {
                ## AnyOverlap
                ## <=> Keeping all user regions
            } elseif {[regexp "BNDproximity" $formattedSortedUserBEDfile]} {
                ## BNDproximity
                ## <=> |start_SV − start_Ft| < $g_AnnotSV(breakpointProximity) and |end_SV − end_Ft| < $g_AnnotSV(breakpointProximity)
                if {[expr {abs($SVtoAnn_start-$userFt_start)}] > $g_AnnotSV(breakpointProximity)} {continue}
                if {[expr {abs($SVtoAnn_end-$userFt_end)}] > $g_AnnotSV(breakpointProximity)} {continue}
            }
            
            # Each SV to annotate can be overlapped with several users regions => use of "$i" to merge the annotations column by column
            set i "$g_numberOfAnnotationCol($formattedSortedUserBEDfile)"
            while {$i > 0} {
                lappend L_userBEDAnn_${i}($SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end) [lindex $Ls end-[expr {$i-1}]]
                incr i -1
            }
        }
        
        # Loading userBED final annotation for each SV
        set i "$g_numberOfAnnotationCol($formattedSortedUserBEDfile)"
        while {$i > 0} {
            foreach SVtoAnn [array names L_userBEDAnn_$i] {
                # We want to keep the same order when removing the redundancy
                set L_userBEDAnn_${i}($SVtoAnn) [RemoveRedundancyWithoutSorting [set L_userBEDAnn_${i}($SVtoAnn)]]
                
                if {$use3points && [llength [set L_userBEDAnn_${i}($SVtoAnn)]] > 50} {
                    # Too long (often with large SV) and can cause trouble in a spreadsheet. Not used for Cytobands.
                    set L_userBEDAnn_${i}($SVtoAnn) [lrange [set L_userBEDAnn_${i}($SVtoAnn)] 0 50]
                    lappend L_userBEDAnn_${i}($SVtoAnn) "..."
                }
                append userBEDtext($formattedSortedUserBEDfile,$SVtoAnn) "\t[join [set L_userBEDAnn_${i}($SVtoAnn)] ";"]"
            }
            incr i -1
        }
        
        ## Final reajustement
        set i "$g_numberOfAnnotationCol($formattedSortedUserBEDfile)"
        foreach SVtoAnn [array names L_userBEDAnn_$i] {
            regsub "^\t" $userBEDtext($formattedSortedUserBEDfile,$SVtoAnn) "" userBEDtext($formattedSortedUserBEDfile,$SVtoAnn)
        }
        regsub "^\t" $userBEDtext($formattedSortedUserBEDfile,Empty) "" userBEDtext($formattedSortedUserBEDfile,Empty)
        
        
        ## Annotation done
        set userBEDtext($formattedSortedUserBEDfile,DONE) 1
        set g_AnnotSV(userBEDAnn) 1
        file delete -force $tmpFile
    }
    
    if {[info exist userBEDtext($formattedSortedUserBEDfile,$SVchrom,$SVstart,$SVend)]} {
        return $userBEDtext($formattedSortedUserBEDfile,$SVchrom,$SVstart,$SVend)
    } else {
        return $userBEDtext($formattedSortedUserBEDfile,Empty)
    }
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-variantconvert.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


# - Check if the reference fasta file in the variantconvert bed configfiles has the good path
# - Check if the "pip install -e ." command was already run
proc checkVariantconvertConfigfile {} {
    
    global g_AnnotSV
    
    # Use of variantconvert to create a vcf output
    if {$g_AnnotSV(vcf)} {
        
        # - Check if the reference fasta file in the variantconvert bed configfiles has the good path
        #############################################################################################
        
        foreach formatFile {bed vcf} {
            
            set configfile "$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_$formatFile.json"
            
            if {$g_AnnotSV(variantconvertMode) eq "combined"} {
                set localConfigfile "$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_$formatFile.combined.local.json"
            } elseif {$g_AnnotSV(variantconvertMode) eq "full"} {
                set localConfigfile "$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_$formatFile.full.local.json"
            } elseif {$g_AnnotSV(variantconvertMode) eq "fullsplit"} {
                set localConfigfile "$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_$formatFile.fullsplit.local.json"
            }
            
            if {$g_AnnotSV(annotationsDir) ne ""} {
                set pathDir "$g_AnnotSV(annotationsDir)"
            } else {
                set pathDir "$g_AnnotSV(installDir)/share/AnnotSV/"
            }
            
            set distributedPathLine "\"path\": \".*\","
            set newPathLine         "\"path\": \"$pathDir/Annotations_Human/BreakpointsAnnotations/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.fasta\","
            
            set distributedRefLine  "\"##reference=file:.*\""
            set newRefLine          "\"##reference=file:$pathDir/Annotations_Human/BreakpointsAnnotations/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.fasta\""
            
            set distributedModeLine  "\"mode\": \"combined\","
            set newfullModeLine      "\"mode\": \"full\","
            set newfullsplitModeLine "\"mode\": \"full\\&split\","
            
            # 1 - AnnotSV install done with the "root" user
            # 2 - AnnotSV run with "non-root" user
            # (or vice versa)
            # => The $localConfigfile can not be created by a non-root user. The "configs" dir should exists with 777 permissions (Done in the Makefile)
            
            # If the user defined a wrong "-annotationsDir" during the first execution of AnnotSV (using the -vcf 1 parameter), the $localConfigfile need to be removed then recomputed.
            if {[file exists $localConfigfile]} {
                set testPathExists 0
                set testRefExists 0
                foreach L [LinesFromFile $localConfigfile] {
                    if {[regexp "\"path\": \"(.*)\"," $L match path]} {
                        if {[file exists $path]} {set testPathExists 1}
                    }
                    if {[regexp "\"##reference=file:(.*)\"" $L match ref]} {
                        if {[file exists $ref]} {set testRefExists 1}
                    }
                }
                if {$testPathExists eq 0 || $testRefExists eq 0} {
                    file delete -force $localConfigfile
                }
            }
            # If the file has been deleted or does not yet exist:
            if {![file exists $localConfigfile]} {
                set L_Lines {}
                foreach L [LinesFromFile $configfile] {
                    if {[regexp "$distributedPathLine" $L]} {
                        regsub "$distributedPathLine" $L "$newPathLine" L
                    }
                    if {[regexp "$distributedRefLine" $L]} {
                        regsub "$distributedRefLine" $L "$newRefLine" L
                    }
                    if {[regexp "$distributedModeLine" $L]} {
                        if {$g_AnnotSV(variantconvertMode) eq "full"} {
                            regsub "$distributedModeLine" $L "$newfullModeLine" L
                        } elseif {$g_AnnotSV(variantconvertMode) eq "fullsplit"} {
                            regsub "$distributedModeLine" $L "$newfullsplitModeLine" L
                        }
                    }
                    lappend L_Lines $L
                }
                ReplaceTextInFile [join $L_Lines "\n"] $localConfigfile
            }
        }
        
        # - Check if the "pip install -e ." command was already run
        ###########################################################
        
        # => Can be done during the installation with the Makefile (if the python environment is OK)
        set currentDir [pwd]
        set flagFile "$g_AnnotSV(variantconvertDir)/pipinstall.flag"
        set vcDone 0
        catch {
            if {![file exists $flagFile] || ![regexp -nocase "Successfully installed variantconvert" [ContentFromFile $flagFile]]} {
                cd $g_AnnotSV(variantconvertDir)
                if {[catch {exec pip3 install -e .} Message]} {
                    WriteTextInFile "$Message" $flagFile
                    WriteTextInFile "\n##############################################\n\n" $flagFile
                    if {[catch {exec pip install -e .} Message]} {
                        WriteTextInFile "$Message" $flagFile
                        WriteTextInFile "\n##############################################\n\n" $flagFile
                        if {[catch {exec python -m pip install -e .} Message]} {
                            WriteTextInFile "$Message" $flagFile
                            WriteTextInFile "\n##############################################\n\n" $flagFile
                        } else {
                            set vcDone 1
                        }
                    } else {
                        set vcDone 1
                    }
                } else {
                    set vcDone 1
                }
            }
        }
        if {$vcDone} {
            WriteTextInFile "Done" $flagFile
        }
        cd $currentDir
    }
}



proc runVariantconvert {outputFile} {
    
    global g_AnnotSV
    
    regsub "\.tsv$" $outputFile ".vcf" VCFoutputFile
    
    catch {exec python3 $g_AnnotSV(variantconvertDir)/src/variantconvert --version} Message
    if {[regexp "variantconvert (\[0-9\]+\\.\[0-9\]+\\.\[0-9\]+)" $Message match version]} {
        set version "v$version "
    } else {
        set version ""
    }
    
    puts "...creation of the VCF output file: $VCFoutputFile"
    puts "   AnnotSV relies on the variantconvert tool ${version}(https://github.com/SamuelNicaise/variantconvert)"
    
    regsub "\.vcf$" $VCFoutputFile ".variantconvert.log" LogFile
    
    
    # run variantconvert
    ####################
    
    if {[regexp -nocase "\\.vcf(.gz)?$" $g_AnnotSV(SVinputFile)]} {
        
        ## SVinputfile is a VCF
        #######################
        
        # configfile definition
        if {$g_AnnotSV(variantconvertMode) eq "combined"} {
            set localConfigfile "$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_vcf.combined.local.json"
        } elseif {$g_AnnotSV(variantconvertMode) eq "full"} {
            set localConfigfile "$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_vcf.full.local.json"
        } elseif {$g_AnnotSV(variantconvertMode) eq "fullsplit"} {
            set localConfigfile "$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_vcf.fullsplit.local.json"
        }
        
        set command "python3 $g_AnnotSV(variantconvertDir)/src/variantconvert convert -i $outputFile -o $VCFoutputFile -c $localConfigfile"
        
    } else {
        
        ## SVinputfile is a BED)
        ########################
        
        # configfile definition
        if {$g_AnnotSV(variantconvertMode) eq "combined"} {
            set localConfigfile "$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_bed.combined.local.json"
        } elseif {$g_AnnotSV(variantconvertMode) eq "full"} {
            set localConfigfile "$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_bed.full.local.json"
        } elseif {$g_AnnotSV(variantconvertMode) eq "fullsplit"} {
            set localConfigfile "$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_bed.fullsplit.local.json"
        }
        
        if {$g_AnnotSV(svtBEDcol) == -1 } {
            puts "   WARNING: With a \"BED\" SV input file, the user has to define the -svtBEDcol option."
            puts "            => could not create the VCF output file:"
            if {$g_AnnotSV(svtBEDcol) == -1}       {puts "               -svtBEDcol $g_AnnotSV(svtBEDcol)"}
            return
        } else {
            set command "python3 $g_AnnotSV(variantconvertDir)/src/variantconvert convert -i $outputFile -o $VCFoutputFile -c $localConfigfile"
        }
    }
    
    # variantconvert output
    #######################
    catch {eval exec $command} Message
    regsub -all "FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error" $Message "..." MessageReg
    if {[regexp -nocase "error" $MessageReg]} {
        puts "   (a minimal Python 3.8 installation is required, as well as the natsort, panda and pyfaidx Python modules)"
        puts "Error:"
        puts "   => cf $LogFile"
    }
    ReplaceTextInFile "$command\n\n$Message" $LogFile
    
    return
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-vcf.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


##################################################################
# Search for the place of a number into a big ordered number list.
# Return the indice after which we can range the number
# Return -1 if number < [lindex $ListeOrdonnee 0]
##################################################################
proc DichotomySearch {number OrderedNumberList} {
    set i 0
    set j [expr {[llength $OrderedNumberList]-1}]
    if {$number<[lindex $OrderedNumberList 0]} {return -1}
    if {$number>=[lindex $OrderedNumberList $j]} {return $j}
    set k [expr {($i+$j)/2}]
    
    if {$number<[lindex $OrderedNumberList $k]} {set j $k} else {set i $k}
    while {[expr {$j-$i}] > 1} {
        set k [expr {($i+$j)/2}]
        if {$number<[lindex $OrderedNumberList $k]} {set j $k} else {set i $k}
    }
    return $i
}


##################################################################
# Prepare 5 new annotation columns:
# - Number of homozygous SNV/indel detected in the sample and located in the SV --- $countHom($sample)
# - Number of heterozygous SNV/indel detected in the sample and  located in the SV --- $countHtz($sample)
# - Ratio of htz / Hom ---  $HtzHomRatio
# - Ratio of htz / Total --- $HtzTotRatio
# - Total number of calls detected in all samples and located in the SV --- $totalCount
##################################################################
proc VCFannotation {SVchrom SVstart SVend SVtype} {
    
    global g_AnnotSV
    global lPos
    global L_allSamples
    
    ## VCFs parsing is done only 1 time (After, g_AnnotSV(vcfParsing) is set to "done")
    if {![info exists g_AnnotSV(vcfParsing)]} {
        
        set g_AnnotSV(vcfParsing) "done"
        
        # parsing of $g_AnnotSV(snvIndelFiles): creation of lPos($SVchrom,htz,sample), lPos($SVchrom,hom,sample) and lPos($SVchrom,tot,cohort)
        puts "\n\n...parsing of snvIndelFiles for \"$g_AnnotSV(snvIndelSamples)\" ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        
        # "eval glob" accept regular expression ("*.vcf") as well as a list of files ("sample1.vcf sample2.vcf.gz"):
        set L_allSamples {}
        foreach vcfF [eval glob -nocomplain $g_AnnotSV(snvIndelFiles)] {
            
            # Split multiallelic sites into multiple rows
            puts "\t...split multiallelic sites into multiple rows for $vcfF ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
            set tmpVCF1 "$g_AnnotSV(outputDir)/[file tail $vcfF].[clock seconds].separate.vcf"
            set tmpVCFgz1 "$g_AnnotSV(outputDir)/[file tail $vcfF].[clock seconds].separate.vcf.gz"
            catch {eval exec $g_AnnotSV(bcftools) norm -m -both $vcfF > $tmpVCF1} Message
            
            if {[file size $tmpVCF1] eq 0} {
                # we continue AnnotSV without splitting the multiallelic sites!
                puts "\t   -- VCFannotation --"
                puts "\t   $g_AnnotSV(bcftools) norm -m -both $vcfF > $tmpVCF1"
                puts "\t   $tmpVCF1: file empty."
                foreach line [split $Message "\n"] {
                    if {[regexp -nocase "error|fail" $line]} {puts "\t   $line"}
                }
                puts "\t   => No multiallelic treatment done."
                if {[regexp -nocase ".gz$" $vcfF]} {
                    file copy -force $vcfF $tmpVCFgz1
                } else {
                    catch {eval exec cat $vcfF | gzip > $tmpVCFgz1} Message
                }
            } elseif {[regexp -nocase "error|fail" $Message]} {
                # we continue AnnotSV without splitting the multiallelic sites !
                puts "\t   -- VCFannotation --"
                puts "\t   $g_AnnotSV(bcftools) norm -m -both $vcfF > $tmpVCF1"
                foreach line [split $Message "\n"] {
                    if {[regexp -nocase "error|fail" $line]} {puts "\t   $line"}
                }
                puts "\t   => No multiallelic treatment done."
                if {[regexp -nocase ".gz$" $vcfF]} {
                    file copy -force $vcfF $tmpVCFgz1
                } else {
                    catch {eval exec cat $vcfF | gzip > $tmpVCFgz1} Message
                }
            } else {
                catch {eval exec gzip $tmpVCF1} Message
            }
            file delete -force $tmpVCF1
            
            # Parsing of $vcfF
            puts "\t...parsing of $vcfF ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
            set iIntersect 0
            set iSV 0
            set iLoaded 0
            set iNotPASS 0
            set iNotGT 0
            
            # VCF should not contain "chr" prefix
            regsub ".vcf.gz$" $tmpVCFgz1 ".withoutChr.vcf.gz" tmpVCFgz2
            catch {exec gunzip -c $tmpVCFgz1 | grep -c "^chr"} Message
            if {[string index $Message 0] ne 0} {
                exec gunzip -c $tmpVCFgz1 | sed "s/^chr//" | gzip > $tmpVCFgz2
            } else {
                set tmpVCFgz2 "$tmpVCFgz1"
            }
            
            # Header for the intersection with the SV bedfile
            regsub ".vcf.gz$" $tmpVCFgz2 ".intersect.vcf.gz" tmpVCFgz3
            regsub ".gz$" $tmpVCFgz3 "" tmpVCF3
            set f [open "| gzip -cd $tmpVCFgz2"]
            set L_tmpVCF_Header {} ; # Header is used to find "samples" columns names
            while {! [eof $f]} {
                set L [gets $f]
                if {[regexp "^#" $L]} {
                    set L_tmpVCF_Header $L
                } else {
                    break
                }
            }
            unset f
            lappend L_allSamples {*}[lrange $L_tmpVCF_Header 9 end]
            WriteTextInFile "$L_tmpVCF_Header" $tmpVCF3
            if {[catch {exec gzip $tmpVCF3} Message]} { ; #creation of $tmpVCFgz3
                puts "-- VCFannotation --"
                puts "gzip $tmpVCF3"
                puts $Message
            }
            
            # Intersect with the bedfile
            if {[catch {exec gunzip -c $tmpVCFgz2 | $g_AnnotSV(bedtools) intersect -a stdin -b $g_AnnotSV(bedFile) > $tmpVCF3} Message]} {
                if {[regexp -nocase "error" $Message]} {
                    WriteTextInFile "$Message" $tmpVCF3.error
                    puts "-- VCFannotation --"
                    puts "gunzip -c $tmpVCFgz2 | $g_AnnotSV(bedtools) intersect -a stdin -b $g_AnnotSV(bedFile) > $tmpVCF3"
                    puts "Error: look at $tmpVCF3.error"
                }
            }
            
            # Nettoyage
            file delete -force $tmpVCFgz1
            file delete -force $tmpVCFgz2
            
            if {[file size $tmpVCF3] eq 0} {
                # no intersection between the bed and the VCF, no SNV/Indel to load in memory
                puts "\t\t-> no variant in the intersection"
                file delete -force $tmpVCF3
                file delete -force $tmpVCFgz3
                continue
            } else {
                if {[catch {exec cat $tmpVCF3 | gzip >> $tmpVCFgz3} Message]} {
                    puts "-- VCFannotation --"
                    puts "cat $tmpVCF3 | gzip >> $tmpVCFgz3"
                    puts $Message
                }
                file delete -force $tmpVCF3
            }
            
            # load SNV/Indel in memory
            set f [open "| gzip -cd $tmpVCFgz3"]
            set L_samples1VCF {}
            while {![eof $f]} {
                set L [gets $f]
                set Ls [split $L "\t"]
                
                if {[string range $L 0 5] eq "#CHROM"} {
                    set L_samples1VCF [lrange $Ls 9 end]
                    set k 9
                    foreach sample [lrange $Ls 9 end] {
                        set i_sample($sample) $k
                        incr k
                    }
                    continue
                }
                if {[string index $L 0] eq "#" || $L eq ""} {continue}
                
                incr iIntersect
                
                # set the variables
                set Ls [split $L "\t"]
                set chrom  [lindex $Ls 0]
                regsub -nocase "chr" $chrom "" chrom
                set pos    [lindex $Ls 1]
                
                # Consider only the SNV/indel (not the SV in the VCF file)
                ##########################################################
                # Example of SV:
                # - Type1: ref="G" and alt="ACTGCTAACGATCCGTTTGCTGCTAACGATCTAACGATCGGGATTGCTAACGATCTCGGG"
                # - Type2: "<INS>", "<DEL>", ...
                # - Type3: complex rearrangements with breakends: "G]17:1584563]"
                set ref [lindex $Ls 3]
                set alt [lindex $Ls 4]
                if {[regexp "<|\\\[|\\\]" $alt]} {incr iSV; continue}; # it is an SV
                set variantLength [expr {[string length $ref]-[string length $alt]}]
                if {[expr {abs($variantLength)}]>$g_AnnotSV(SVminSize)} {incr iSV; continue}; # it is an SV
                
                set filter [lindex $Ls 6]
                set formatData [lindex $Ls 8]
                set j_GT [lsearch -exact [split $formatData ":"] "GT"]
                if {$j_GT eq -1} {incr iNotGT; continue}
                
                # keep only variant with FILTER == PASS
                if {$g_AnnotSV(snvIndelPASS) && $filter ne "PASS"} {incr iNotPASS; continue}
                incr iLoaded
                
                foreach sample $L_samples1VCF {
                    set sampleData [lindex $Ls $i_sample($sample)]
                    # set the GT
                    set GTsample [lindex [split $sampleData ":"] $j_GT]
                    set GTsample [split $GTsample "/|\\|"]
                    set GTsampleA [lindex $GTsample 0]
                    set GTsampleB [lindex $GTsample 1]
                    if {$GTsampleA eq "" || $GTsampleB eq ""} {continue}
                    if {$GTsampleA eq "0" && $GTsampleB eq "0"} {continue}
                    if {[lindex $GTsample 0] ne [lindex $GTsample 1]} {set GT "htz"} else {set GT "hom"}
                    # set the lPos($chrom,$GT,$sample)
                    lappend lPos($chrom,$GT,$sample) $pos
                }
                if {[info exists i_samples]} {
                    unset i_samples
                }
            }
            close $f
            file delete -force $tmpVCFgz3
            if {$iIntersect} {
                puts "\t\t-> $iIntersect SNV/indel located in all the SV (potentially with redundancy depending on SV overlap)"
            }
            if {$iLoaded} {
                puts "\t\t-> $iLoaded SNV/indel loaded"
            }
            if {$iSV} {
                puts "\t\t-> $iSV SV excluded (considering only SNV/indel from the VCF)"
            }
            if {$iNotPASS} {
                puts "\t\t-> $iNotPASS SNV/indel excluded because of the FILTER value not equal to \"PASS\""
            }
            if {$iNotGT} {
                puts "\t\t-> $iNotGT SNV/indel excluded because of the absence of GT information"
            }
        }
    }
    
    set textToReturn {}
    set lPosTotInTheCohort {}
    foreach sample $L_allSamples {
        # Count for hom variants
        set countHom($sample) 0
        if {[info exists lPos($SVchrom,hom,$sample)]} {
            set i_first [DichotomySearch $SVstart $lPos($SVchrom,hom,$sample)]
            set i_last [DichotomySearch $SVend $lPos($SVchrom,hom,$sample)]
            if {$SVstart ne [lindex $lPos($SVchrom,hom,$sample) $i_first]} {set i_first [expr {$i_first+1}]}
            set L_posHom [lsort -unique [lrange $lPos($SVchrom,hom,$sample) $i_first $i_last]]
            set countHom($sample) [llength $L_posHom]
            lappend lPosTotInTheCohort {*}$L_posHom
        }
        # Count for htz variants
        set countHtz($sample) 0
        if {[info exists lPos($SVchrom,htz,$sample)]} {
            set i_first [DichotomySearch $SVstart $lPos($SVchrom,htz,$sample)]
            set i_last [DichotomySearch $SVend $lPos($SVchrom,htz,$sample)]
            if {$SVstart ne [lindex $lPos($SVchrom,htz,$sample) $i_first]} {set i_first [expr {$i_first+1}]}
            set L_posHtz [lsort -unique [lrange $lPos($SVchrom,htz,$sample) $i_first $i_last]]
            set countHtz($sample) [llength $L_posHtz]
            lappend lPosTotInTheCohort {*}$L_posHtz
        }
    }
    set lPosTotInTheCohort [lsort -unique $lPosTotInTheCohort]
    set totalCount [llength $lPosTotInTheCohort]
    
    
    if {[regexp "DEL" [normalizeSVtype $SVtype]]} {
        if {$totalCount>50} {
            set textToReturn ""
            foreach sample $g_AnnotSV(snvIndelSamples) {
                # Count for hom variants (Hom + WT hom)
                set CountAllHom [expr {$totalCount-$countHtz($sample)}]
                # htz/AllHom
                if {$CountAllHom eq 0} {
                    set HtzHomRatio "NA"
                } else {
                    set HtzHomRatio [format "%.4f" [expr {$countHtz($sample)*1.0/$CountAllHom}]]
                }
                # htz(sample)/total(cohort)
                if {$totalCount eq 0} {
                    set HtzTotRatio "NA"
                } else {
                    set HtzTotRatio [format "%.4f" [expr {$countHtz($sample)*1.0/$totalCount}]]
                }
                append textToReturn "$countHom($sample)\t$countHtz($sample)\t$HtzHomRatio\t$HtzTotRatio\t"
            }
            append textToReturn "$totalCount"
        } else {
            foreach sample $g_AnnotSV(snvIndelSamples) {
                append textToReturn "$countHom($sample)\t$countHtz($sample)\tNA\tNA\t"
            }
            append textToReturn "$totalCount"
        }
    } else {
        foreach sample $g_AnnotSV(snvIndelSamples) {
            append textToReturn "NA\tNA\tNA\tNA\t"
        }
        append textToReturn "NA"
    }
    
    return "$textToReturn"
}


proc VCFsToBED {SV_VCFfiles} {
    
    global g_AnnotSV
    global VCFheader
    global g_SVLEN
    global g_ID
    global g_deb
    
    
    ## BED: 0-based, non-inclusive-end [startFromBED, endFromBED[
    ## VCF: 1-based, inclusive-end [startFromBED+1, endFromBED]
    
    ## It is to notice in the VCF specification:
    ## - For imprecise structural variants (i.e. symbolic allele with bracketed notation; e.g. <DUP>):
    ##   END = POS + length of REF allele
    ## - For precise structural variants (e.g. ref="G" and alt="ACTGCTA):
    ##   END = POS + length of REF allele - 1
    
    set SV_BEDfile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_AnnotSV_inputSVfile.bed"
    file delete -force "$SV_BEDfile"
    set VCFheader ""
    # Variants from the input file that are not annotated by AnnotSV are reported in $unannotatedOutputFile
    if {[regexp "annotated" $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile)]} {
        regsub "annotated" $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile) "unannotated" unannotatedOutputFile
    } else {
        regsub ".tsv$" $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile) ".unannotated.tsv" unannotatedOutputFile
    }
    file delete -force $unannotatedOutputFile
    
    foreach VCFfile $SV_VCFfiles {
        puts "...VCF to BED ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
        set L_TextToWrite {}
        set L_squBrack_SV_ID_Written {}
        
        if {[regexp -nocase ".gz$" $VCFfile]} {
            set f [open "| gzip -cd $VCFfile"]
        } else {
            set f [open "$VCFfile"]
        }
        
        set i 0
        set VCFheaderNotPresent 1
        
        # Check if the GT feature is present for at least 1 variant
        #
        # GT info:
        # - 0/1 and 1/0 functionally mean the same thing (that the individual is a heterozygote) - since the genotype is unphased, the alleles aren't ordered.
        #   The / symbol tells you the genotype is unphased.
        #   The convention is to write the GT field in ascending order, so 0/1 rather than 1/0
        # - 0|1 and 1|0 do mean something different, since the pipe symbol "|" tell us the order of the alleles matters
        # - ”.” must be specified for each missing allele in the GT field (for example ./.) (=> if a call cannot be made for a sample at a given locus)
        #
        # In the code:
        # - if g_AnnotSV(missingGTinSamplesid) set to 1 (default):
        #	=> Sample ID with GT "./." or ".|." (unknown GT) are reported in the "Samples_ID" output column
        # - if g_AnnotSV(missingGTinSamplesid) set to 0:
        #   => Sample ID with GT "./." or ".|." (unknown GT) are NOT reported in the "Samples_ID" output column
        set GTabsent 1; #To check if the “GT” field is indicated in the FORMAT column
        
        set VCFlineNumber 0
        set nUnknownGT 0; # Number of Samples with unknown GT for an SV
        
        while {![eof $f]} {
            
            if {$i eq "500000"} {
                WriteTextInFile [join $L_TextToWrite "\n"] $SV_BEDfile
                set L_TextToWrite {}
                set i 0
            }
            
            set L [gets $f]
            set Ls [split $L "\t"]
            incr VCFlineNumber
            if {[string index $L 0] eq "#" || $L eq ""} {
                if {[regexp "^#CHROM" $L]} {
                    # Check if this header is complete
                    foreach classicValue {#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT} {
                        if {[lsearch -exact $Ls $classicValue] eq -1} {
                            puts "VCF header file badly formatted:"
                            puts $L
                            puts "($classicValue not present)"
                            puts "Exit with error"
                            exit 2
                        }
                    }
                    set VCFheaderNotPresent 0
                    #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  HG00096
                    if {$g_AnnotSV(SVinputInfo)} {
                        set VCFheader "SV_type\tSamples_ID\t[join [lrange $Ls 2 end] "\t"]"
                    } else {
                        set VCFheader "SV_type\tSamples_ID\t[join [lrange $Ls 3 4] "\t"]\t[join [lrange $Ls 8 end] "\t"]"
                    }
                    set L_allSamples [lrange $Ls 9 end]
                }
                continue
            }
            incr i
            
            if {$VCFheaderNotPresent} {
                set VCFheaderNotPresent 0
                puts "ERROR:\n$VCFfile: no VCF header line (prefixed with \"#CHROM\"). Check your VCF."
                puts "Exit with error\n"
                exit 2
            }
            
            # Consider only the SV (not the SNV/indel)
            ##########################################
            # Example of SV:
            # - Type1: ref="G" and alt="ACTGCTAACGATCCGTTTGCTGCTAACGATCTAACGATCGGGATTGCTAACGATCTCGGG" (length > 50bp)
            # - Type2: alt="<INS>", "<DEL>", "<TRA>"...
            # - Type3: squared-bracketed SV notation: alt="G]17:1584563]" or alt="G]chr17:1584563]" (length > 50bp)
            #          (developed with the assistance and guidance of Rodrigo Martin, BSC, Spain)
            set BNDrescue 0 ;# The ALT of a rescue BND is not square-bracketed anymore
            set TRArescue 0
            set SquareBracketedSV 0
            set chrom [lindex $Ls 0]
            regsub -nocase "chr" $chrom "" chrom
            set posVCF [lindex $Ls 1]
            set pos [expr {$posVCF-1}]; # VCF: 1-based ==> BED: 0-based
            regsub "chr" [lindex $Ls 3] "" ref ; # for alt like: "alt="G]chr17:1584563]"
            regsub "chr" [lindex $Ls 4] "" alt
            set altVCF $alt ;# To use with the proc "settingOfTheAnnotSVID" (because alt is modified if it is a square-bracketed notation)
            set refVCF $ref
            regsub "CHR2=chr" $Ls "CHR2=" Ls
            regsub -all "\"" [lindex $Ls 7] "" INFOcol
            set svlen ""; set end ""; set svtype ""; set cipos ""; set ciend ""; set chr2 ""; set cipos95 ""; set ciend95 ""
            if {[regexp "SVLEN=(\[0-9-\]+)" $INFOcol match SVLEN]} {set svlen $SVLEN}
            if {[regexp ";END=(\[0-9\]+)" $INFOcol match END] || [regexp "^END=(\[0-9\]+)" $INFOcol match END]} {set end $END}
            if {[regexp "SVTYPE=(\[^;\]+)" $INFOcol match SVTYPE]} {set svtype $SVTYPE}
            if {[regexp "CIPOS=(\[^;\]+)" $INFOcol match CIPOS]} {set cipos $CIPOS}
            if {[regexp "CIEND=(\[^;\]+)" $INFOcol match CIEND]} {set ciend $CIEND}
            if {[regexp "CHR2=(\[^;\]+)" $INFOcol match CHR2]} {set chr2 $CHR2} ;# Translocation
            if {[regexp "CIPOS95=(\[^;\]+)" $INFOcol match CIPOS95]} {set cipos95 $CIPOS95}
            if {[regexp "CIEND95=(\[^;\]+)" $INFOcol match CIEND95]} {set ciend95 $CIEND95}
            if {[regexp "^<" $alt]} {
                # Type2: angle-bracketed notation <...>
                
                if {$end eq ""} {
                    # INS:ME ("LINE1", "ALU", "SVA", "BND" or "TRA without mate_id")
                    set end $posVCF
                }
                
                if {[regexp "<TRA>" $alt]} {
                    # Example of a translocation VCF format line:
                    # chr1   63705386   N    .     <TRA>   51      PASS    "PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chrX;END=478444;SVLEN=0"        GT      ./.
                    # POS = 63705386 --> sur chrom1
                    # END = 478444   --> sur chromX
                    ## => annotation should consider only this breakpoint on chr1 (not the BND on chrX because the SVINFO features are specific to this BND on chr1, not to the other one on chrX)
                    
                    #2       321682  tra_a   T       <TRA>   .       PASS    SVTYPE=BND;CHR2=13;END=123456  GT      0/0     0/1
                    set end $posVCF
                    set svtype "TRA"
                    set svlen 0
                    # Processing the alt of the TRA (in case of having 2 TRA with the same "start" but different "end"):
                    # "alt" => "alt_CHR2_END"
                    #
                    # Example:
                    # Two translocations that start at the same position, but both ENDs are different:
                    #    chrX  83731873  .  T   <TRA>   46    .   CHR2=chr1;CIEND=-563,563;CIPOS=-563,563;END=102454994;SVLEN=1;SVTYPE=TRA    GT:PE:SR    0/1:7,2:0,0
                    #    chrX  83731873  .  T   <TRA>   69    .   CHR2=chr1;CIEND=-563,563;CIPOS=-563,563;END=111581087;SVLEN=1;SVTYPE=TRA    GT:PE:SR    0/1:6,3:0,0
                    # => alt: <TRA>_chr1_102454994 and <TRA>_chr1_111581087
                    # => This will permit to obtain 2 different AnnotSV_ID for the 1st breakend: X_83731310_83732436_TRA_1 and X_83731310_83732436_TRA_2
                    if {$chr2 ne ""} { ;# Some TRA do not have mate_id
                        set alt "<TRA>_${chr2}_$end"
                        #set altVCF $alt
                        lset Ls 4 "$alt"
                    }
                } else {
                    # First, we've choosen the SVTYPE in the INFO column (done above with the parsing of INFOcol).
                    # Second, we re-set with the SVtype in the ALT column (if exist).
                    set svtypeALT ""
                    if {[regexp "^<(.+)>$" $alt match svtypeALT]} {
                        set svtypeALT [normalizeSVtype $svtypeALT] ;# DEL or DUP or INS or INV or ""
                    }
                    if {$svtypeALT != ""} {
                        set svtype $svtypeALT
                    } else {
                        set svtype [normalizeSVtype $svtype] ;# DEL or DUP or INS or INV or ""
                    }
                    
                    # Processing the alt of the INS (in case of having 2 INS with the same "pos" but with different "seq" and/or "svlen"):
                    # "alt" => "alt_INSSEQ" ou "alt_svlen"
                    #
                    # Example:
                    # Two insertions at the same position, but with different inserted sequences:
                    #    chr18   1963003 aa .   <INS>   19    PASS    SVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGAAAACCGT        GT      0/1
                    #    chr18   1963003 xx .   <INS>   50    PASS    SVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT     GT      0/1
                    # Two insertions at the same position, but with different lengths
                    #    chr18   1963003 cuteSV.INS.4743 .       <INS>   19      PASS    SVLEN=1512;SVTYPE=INS;CHR2=chr18;END=1963003    GT      0/1
                    #    chr18   1963003 cuteSV.INS.4744 .       <INS>   50      PASS    SVLEN=51;SVTYPE=INS;CHR2=chr18;END=1963003      GT      0/1
                    # => This will permit to obtain 2 different AnnotSV_ID: chr18_1963003_1963003_INS_1 and chr18_1963003_1963003_INS_2
                    
                    # INS, INSERTED_SEQUENCE, SVINSSEQ, INSSEQ, SEQ, CONSENSUS
                    if {$svtype == "INS"} {
                        if {[regexp "(INS|INSERTED_SEQUENCE|INSSEQ|SEQ|CONSENSUS)=(\[acgtnACGTN\]+)" $INFOcol match tutu INSSEQ]} {
                            append alt "_$INSSEQ"
                        } elseif {$svlen ne ""} {
                            append alt "_$svlen"
                        }
                        #set altVCF $alt
                        lset Ls 4 "$alt"
                    }
                }
                
                if {$svlen eq "" && $end ne ""} {
                    if {$svtype eq "DEL"} {
                        set svlen [expr {$posVCF-$end}]
                    } elseif {[regexp "DUP|INV" $svtype]} {
                        set svlen [expr {$end-$posVCF}]
                    }
                }
                
                # Check the SVminSize for DUP, DEL and INS
                if {$svlen ne "" && ($svtype eq "DUP" || $svtype eq "DEL" || $svtype eq "INS")} {
                    if {[expr {abs($svlen)}]<$g_AnnotSV(SVminSize)} {
                        # it is a small variant
                        WriteTextInFile "${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: variantLength ([expr {abs($svlen)}]) < SVminSize ($g_AnnotSV(SVminSize)) (line $VCFlineNumber)" $unannotatedOutputFile
                        continue
                    }
                }
                
            } elseif {[regexp "(\[acgtnACGTN\]*)(\\\[|\\\])(\[^:\]+):(\[0-9\]+)(\\\[|\\\])(\[acgtnACGTN\]*)" $alt match baseLeft bracketLeft inBracketChrom inBracketStart bracketRight baseRight]} {
                # Type3: square-bracketed notation ]...]
                # => Developed with the assistance and guidance of Rodrigo Martin, BSC, Spain
                
                # An SV is described with 2 BND.
                #
                # With bracketed notation, we have 1 line in the VCF for each breakend (=> 2 lines)
                # => Default: It corresponds to only 1 line in the BED file, except for translocation (where both breakends are annotated)
                
                # Rules applied here:
                # - DUP, DEL, INS, INV: In the BND pair of an SV, we keep the line whith pos_POS < pos_ALT.
                #                  The other line (pos_POS > pos_ALT) is only used for BND rescue (not written in the BED file)
                #                  BND rescue:
                #                       - The ALT of a recovered BND is not square-bracketed anymore but angle-bracketed
                #                       - The REF is set to "N"
                # - TRA: Both breakpoints lines are written in the BED file.
                
                set SquareBracketedSV 1
                if {$chrom != $inBracketChrom} {
                    # TRA (chrom_#CHROM != chrom_ALT)
                    #################################
                    
                    # Example:
                    # 17      198982  trn_no_mateid_a A       A]2:321681]	=> Line analysed by AnnotSV
                    # 2       321681  trn_no_mateid_b G       G]17:198982]	=> Line analysed by AnnotSV
                    # (INFO: Can not have a translocation on the same chrom. A translocation on the same chrom is always represented with another thing: DUP, INV or DEL)
                    #        Can not rescue the orientation of the square-brackets from one BND to the paired BND ("]" or "[") => for the rescue: ALT = <TRA>
                    set ref "N"
                    set end $posVCF
                    set svtype "TRA"
                    set svlen 0
                    
                    set TRArescue 1
                    #set altVCF2 "<TRA>"
                    set chrom2 $inBracketChrom
                    set pos2 [expr {$inBracketStart-1}]; # VCF: 1-based ==> BED: 0-based
                    set posVCF2 $inBracketStart
                    set end2 $inBracketStart
                    set INFOcol2 "$INFOcol;BNDrescue"
                    set altVCF2 "N]$chrom:$posVCF]"
                    
                    # #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  sample1  sample2
                    set L2 "$chrom2\t$posVCF2\t[lindex $Ls 2]\t$ref\t$altVCF2\t[join [lrange $Ls 5 6] "\t"]\t$INFOcol2\t[join [lrange $Ls 8 end] "\t"]"
                    set L2s [split $L2 "\t"]
                    #regsub -all "\\\\" $L2s "" L2s
                    regsub -all {\\} $L2s {} L2s
                    
                } else {
                    
                    # If not TRA, check if the line corresponds to the 2d breakend of an SV pair
                    ############################################################################
                    if {$posVCF > $inBracketStart} {
                        # Lines only used for BND rescue
                        
                        # DUP, DEL, INS and INV: We first look at the lines whith pos_POS < pos_ALT
                        # => Here, we search for the reciprocal breakend in case of rescue needed
                        
                        # With one breakend, you can always infer the other. Indeed, the only thing that could be different from the mate breakend is
                        # its CIPOS INFO field (but it should be provided in the CIEND field of the other breakend).
                        # Regarding GT, both breakends must have the same GT because they represent the same thing.
                        # The CIEND/CIPOS relationship is that you can use the CIEND info from the breakend you already have to set the CIPOS field of the new "inferred" breakend.
                        
                        set BNDrescue 1; # The other BND from this BND pair can be recovered here
                        
                        set remember $posVCF
                        set posVCF $inBracketStart
                        set inBracketStart $remember
                        set pos [expr {$posVCF-1}]; # VCF: 1-based ==> BED: 0-based
                        
                        # Modif in $INFOcol: Correction of the CIPOS, CIEND...
                        #                    Add "BNDrescue"
                        set remember $cipos
                        set cipos $ciend
                        set ciend $remember
                        regsub "CIPOS=\[^;\]+" $INFOcol "CIPOS=$cipos" INFOcol
                        regsub "CIEND=\[^;\]+" $INFOcol "CIEND=$ciend" INFOcol
                        set remember $cipos95
                        set cipos95 $ciend95
                        set ciend95 $remember
                        regsub "CIPOS95=\[^;\]+" $INFOcol "CIPOS95=$cipos95" INFOcol
                        regsub "CIEND95=\[^;\]+" $INFOcol "CIEND95=$ciend95" INFOcol
                        append INFOcol ";BNDrescue"
                        
                        # INS rescue
                        if {[string length $baseLeft] > 1} {
                            regsub -nocase "^$ref" $baseLeft "" baseLeft
                            set baseLeft "${baseLeft}N"
                        } elseif {[string length $baseRight] > 1} {
                            regsub -nocase "$ref$" $baseRight "" baseRight
                            set baseRight "N${baseRight}"
                        } elseif {[string length $baseLeft] == 1} {
                            set baseLeft "N"
                        } elseif {[string length $baseRight] == 1} {
                            set baseRight "N"
                        }
                        
                        set ref "N"
                        set remember $baseLeft
                        set baseLeft $baseRight
                        set baseRight $remember
                        if {$bracketLeft == "\["} {
                            set bracketLeft "\]"
                            set bracketRight "\]"
                        } else {
                            set bracketLeft "\["
                            set bracketRight "\["
                        }
                        set alt "$baseLeft$bracketLeft${inBracketChrom}:$inBracketStart$bracketRight$baseRight"
                        #set altVCF $alt
                        
                        # #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  sample1  sample2
                        set L "$chrom\t$posVCF\t[lindex $Ls 2]\t$ref\t$altVCF\t[join [lrange $Ls 5 6] "\t"]\t$INFOcol\t[join [lrange $Ls 8 end] "\t"]"
                        set Ls [split $L "\t"]
                    }
                    
                    
                    # Now, we look successively at the INS, DUP, INV then DEL
                    #########################################################
                    # in order to define: svlen, svtype, end and alt
                    # and to check/write the unannotated SV
                    
                    if {([string length $baseLeft] > 1 || [string length $baseRight] > 1) && $inBracketStart == [expr {$posVCF+1}]} {
                        # INS ("first mapped base" is followed by the inserted sequence)
                        # -> number of bases indicated in ALT > 1
                        # -> END = POS + 1
                        ################################################################
                        # Example:
                        # 13      53040041        ins_by_gridss   T       TATATATATACACAC[13:53040042[	=> Line analysed by AnnotSV
                        # 13      53040042        ins_by_gridss   A       ]13:53040041]ATATATATACACACA	=> Line NOT reported by AnnotSV (if the previous BND has already been analysed)
                        if {[string length $baseLeft] > 1 } {
                            regsub -nocase "^$ref" $baseLeft "" insertedseq
                        } elseif {[string length $baseRight] > 1} {
                            regsub -nocase "$ref$" $baseRight "" insertedseq
                        }
                        set svlen [string length $insertedseq]
                        
                        set svtype "INS"
                        set end $posVCF
                        #set alt "<INS>"
                        if {$svlen<$g_AnnotSV(SVminSize)} {
                            # it is an indel
                            WriteTextInFile "${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: variantLength ($svlen) < SVminSize ($g_AnnotSV(SVminSize)) (line $VCFlineNumber)" $unannotatedOutputFile
                            continue
                        }
                        if {![regexp "INS|ALL" $g_AnnotSV(bracketedAltMode)] || $svlen > [expr {$g_AnnotSV(bracketedAltMaxSize)*1000000}]} {
                            set svlen 0
                            set svtype "BND"
                            set end $posVCF
                        }
                        
                        #set altVCF $alt
                        lset Ls 4 "$alt"
                        
                    } elseif {$bracketRight eq "]" && $baseRight ne ""} {
                        # DUP ("first mapped base" is NOT contained in the bracket: "N[" or "]N"; REF is after the brackets
                        ###################################################################################################
                        # Example:
                        # 2       3000    breakend_dup_a  T       ]2:5000]T  	=> Line analysed by AnnotSV
                        # 2       5000    breakend_dup_b  T       T[2:3000[ 	=> Line NOT reported by AnnotSV (if the previous BND has already been analysed)
                        set svlen [expr {$inBracketStart-$posVCF}]
                        set svtype "DUP"
                        set end $inBracketStart
                        if {$svlen<$g_AnnotSV(SVminSize)} {
                            # it is an indel
                            WriteTextInFile "${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: variantLength ($svlen) < SVminSize ($g_AnnotSV(SVminSize)) (line $VCFlineNumber)" $unannotatedOutputFile
                            continue
                        }
                        if {![regexp "DUP|ALL" $g_AnnotSV(bracketedAltMode)] || $svlen > [expr {$g_AnnotSV(bracketedAltMaxSize)*1000000}]} {
                            set svlen 0
                            set svtype "BND"
                            set end $posVCF
                        }
                    } elseif {($bracketRight eq "]" && $baseLeft ne "") || ($bracketRight eq "\[" && $baseRight ne "")} {
                        # INV ("first mapped base" is contained in the bracket: "N]" or "[N")
                        #####################################################################
                        # Example 1:
                        # 3       2999    breakend_inv_1_a        T       T]3:5000]  	=> Line analysed by AnnotSV
                        # 3       5000    breakend_inv_1_b        T       [3:2999[T  	=> Line NOT reported by AnnotSV (if the previous BND has already been analysed)
                        # Example 2:
                        # 3       3000    breakend_inv_2_a        T       [3:5001[T  	=> Line analysed by AnnotSV
                        # 3       5001    breakend_inv_2_b        T       T]3:3000] 	=> Line NOT reported by AnnotSV (if the previous BND has already been analysed)
                        # Example 3:
                        # 3       3000    breakend_inv_3_a        T       [3:5001[T     => Line analysed by AnnotSV
                        # 3       5001    breakend_inv_3_b        T       [3:3000[T     => Line NOT reported by AnnotSV (if the previous BND has already been analysed)
                        set svlen [expr {$inBracketStart-$posVCF}]
                        set svtype "INV"
                        set end $inBracketStart
                        if {![regexp "INV|ALL" $g_AnnotSV(bracketedAltMode)] || $svlen > [expr {$g_AnnotSV(bracketedAltMaxSize)*1000000}]} {
                            set svlen 0
                            set svtype "BND"
                            set end $posVCF
                        }
                        
                    } elseif {$bracketRight eq "\[" && $baseLeft ne ""} {
                        # DEL ("first mapped base" is NOT contained in the bracket: "N[" or "]N"; "first mapped base" is before the brackets
                        ####################################################################################################################
                        # Example:
                        # 12      3000    breakend_del_1_a        T       T[12:5000[ 	=> Line analysed by AnnotSV
                        # 12      5000    breakend_del_1_b        T       ]12:3000]T  	=> Line NOT reported by AnnotSV (if the previous BND has already been analysed)
                        set svlen [expr {$posVCF-$inBracketStart}];# negative value for del
                        set svtype "DEL"
                        set end $inBracketStart
                        if {[expr {abs($svlen)}]<$g_AnnotSV(SVminSize)} {
                            # it is an indel
                            WriteTextInFile "${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: variantLength ([expr {abs($svlen)}]) < SVminSize ($g_AnnotSV(SVminSize)) (line $VCFlineNumber)" $unannotatedOutputFile
                            continue
                        }
                        if {![regexp "DEL|ALL" $g_AnnotSV(bracketedAltMode)] || $svlen > [expr {$g_AnnotSV(bracketedAltMaxSize)*1000000}]} {
                            set svlen 0
                            set svtype "BND"
                            set end $posVCF
                        }
                    }
                }
                
                
            } elseif {[regexp -nocase "^\[acgtnACGTN.*\]+$" $ref$alt]} {
                # Type1
                regsub -all "\[*.\]" $ref "" refbis ;# cf GRIDSS comment, just below
                regsub -all "\[*.\]" $alt "" altbis
                
                set variantLengthType1 [expr {[string length $altbis]-[string length $refbis]}]
                if {[expr {abs($variantLengthType1)}] < $g_AnnotSV(SVminSize)} {
                    # it is a small insertion or deletion (indel)
                    WriteTextInFile "${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: variantLength ([expr {abs($variantLengthType1)}]) < SVminSize ($g_AnnotSV(SVminSize)) (line $VCFlineNumber)" $unannotatedOutputFile
                    continue
                }
                
                if {$variantLengthType1>0} {
                    # insertion
                    if {$end eq ""} {set end $posVCF}
                    if {$svtype eq ""} {set svtype "INS"}
                } else {
                    # deletion
                    if {$end eq ""} {set end [expr $pos-$variantLengthType1]}
                    if {$svtype eq ""} {set svtype "DEL"}
                }
                
                if {[regexp "\\\." $ref] || [regexp "\\\." $alt]} {
                    # The GRIDSS author says that a . followed by bases refers to a single breakend where the reads cannot be uniquely mapped back.
                    # e.g.: 2       39564894        gridss28_45b    T       .TTCTCTCATAACAAACCATGACATCCAGTCATTTAATACAATATGTCTGGGGTGGCTGGGCCCCTTTTTT 246.24  LOW_QUAL
                    # => AnnotSV can not determine the SV length
                    set variantLengthType1 ""
                } elseif {[string length $refbis] < 10000 && [string length $altbis] < 10000} { ;# else we can have "couldn't compile regular expression pattern: out of memory" in the next regexp!!!
                    if {![regexp -nocase "$refbis" $altbis] && ![regexp -nocase "$altbis" $refbis]} {
                        # Complex SV: AGT>ATTGCATGGACCTGAGTCCCCAAAAAAAAAAATTTTTTTTTTGGGGGGGGGGCCCCCCCCCCGGGGGGGGGG
                        # => AnnotSV can not determine the SV length
                        set variantLengthType1 ""
                    }
                } else {
                    # AnnotSV can not check the ref and alt values
                    # => AnnotSV can not determine the SV length
                    set variantLengthType1 ""
                }
                if {$svlen eq ""} {set svlen $variantLengthType1}
            } else {
                WriteTextInFile "${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: not a known SV format (line $VCFlineNumber)" $unannotatedOutputFile
                continue
            }
            
            
            
            if {$end < $pos} {set tutu $end; set end $pos; set pos $tutu}
            if {$end eq $pos} {set end [expr {$pos+1}]}
            
            if {$g_AnnotSV(includeCI)} {
                # Correction of the "start" / "end" SV positions by using the confidence interval around the boundaries:
                ##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
                ##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
                # e.g. CIPOS=-10,10;CIEND=-10,10;  or  CIPOS=-6,5;CIEND=-6,5;  or  CIPOS=-410,410;CIEND=-410,410
                set ciposleft [lindex [split $cipos ","] 0]
                set ciendright [lindex [split $ciend ","] end]
                if {$ciposleft < 0} {
                    catch {incr pos $ciposleft}
                    if {$pos <=0} {set pos 1}
                }
                if {$ciendright > 0} {
                    catch {incr end $ciendright}
                }
            }
            
            # chrUn_KN707671v1_decoy
            set L_orderedChrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT}
            if {[lsearch -exact "$L_orderedChrom" $chrom] eq -1} {
                WriteTextInFile "${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: chromosome \"$chrom\" unknown (line $VCFlineNumber)" $unannotatedOutputFile
                continue
            }
            # END of the SV not defined
            if {$end eq ""} {
                WriteTextInFile "${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: END of the SV not defined (line $VCFlineNumber)" $unannotatedOutputFile
                continue
            }
            
            if {$BNDrescue} {
                set deb "${chrom}_${posVCF}_${end}_${svtype}"
                set id [settingOfTheAnnotSVID $deb $ref $alt]
                if {[lsearch -exact $L_squBrack_SV_ID_Written "$id"] ne -1} {
                    WriteTextInFile "$id: reciprocal breakend (line $VCFlineNumber)" $unannotatedOutputFile
                    continue
                }
            }
            
            if {$SquareBracketedSV} {
                if {$svtype eq "TRA"} {
                    # If both BND (of a TRA) are presents: the rescue of the 2d BND is already listed in $L_squBrack_SV_ID_Written
                    set idTRArescue "${chrom2}_${posVCF2}_${end2}_${svtype}_${ref}_<TRA>"
                    if {[lsearch -exact $L_squBrack_SV_ID_Written "$idTRArescue"] ne -1} {
                        set TRArescue 0
                    }
                }
            }
            
            # Set up for the Samples_ID value
            # nUnknownGT = Number of Samples with unknown GT for an SV
            set i_gt [lsearch -exact [split [lindex $Ls 8] ":"] "GT"]
            if {$i_gt eq -1} {
                # If the GT is not given, AnnotSV considers that the SV is present in all the samples
                set L_samplesid "$L_allSamples"
            } else {
                set GTabsent 0; # => the “GT” field is indicated in the FORMAT column
                set L_samplesid {}
                set isample 0
                foreach sampleValue [lrange $Ls 9 end] {
                    set gt [lindex [split $sampleValue ":"] $i_gt]
                    if {$gt ne "0/0" && $gt ne "0\|0"} {
                        if {$gt eq "./." || $gt eq ".\|."} {
                            incr nUnknownGT
                            if {$g_AnnotSV(missingGTinSamplesid)} {
                                # AnnotSV reports the sample_id with unknown GT ("./." and ".|.")
                                lappend L_samplesid [lindex $L_allSamples $isample]
                            } else {
                                # AnnotSV do not reports the sample_id with unknown GT ("./." and ".|.")
                            }
                        } else {
                            lappend L_samplesid [lindex $L_allSamples $isample]
                        }
                    }
                    incr isample
                }
            }
            
            # Text to write + Text to possibly rescue (TextToWrite_rescue)
            #
            # AnnotSV_ID is required to set the "g_SVLEN($AnnotSV_ID)" variable
            # - For the setting of AnnotSV_ID, we use the "ref" and "alt" written in the BED file!
            # - At the end, we unset the global variables "g_ID" and "g_deb"
            
            if {$g_AnnotSV(SVinputInfo)} {
                set deb "${chrom}_${posVCF}_${end}_${svtype}"
                set AnnotSV_ID [settingOfTheAnnotSVID $deb $ref $alt]
                if {$BNDrescue} {
                    # With the BND recovery, the REF and ALT fields have an undefined NT ("N")
                    # #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  sample1  sample2
                    set TextToWrite_rescue($AnnotSV_ID) "$chrom\t$pos\t$end\t$svtype\t[join $L_samplesid ","]\t[lindex $Ls 2]\t$refVCF\t$altVCF\t[join [lrange $Ls 5 end] "\t"]"
                    set VCFline_rescue($AnnotSV_ID) $VCFlineNumber
                } else {
                    lappend L_TextToWrite "$chrom\t$pos\t$end\t$svtype\t[join $L_samplesid ","]\t[join [lrange $Ls 2 end] "\t"]"
                    if {$SquareBracketedSV} {
                        #                        if {$svtype eq "TRA"} {
                            #                            set idTRA "${chrom}_${posVCF}_${end}_${svtype}_${ref}_<TRA>"
                            #                            lappend L_squBrack_SV_ID_Written "$idTRA"
                            #                        } else {
                            lappend L_squBrack_SV_ID_Written "$AnnotSV_ID"
                            #                        }
                    }
                    #                    set AnnotSV_ID [settingOfTheAnnotSVID "${chrom}_${pos}_${end}_${svtype}" "$refVCF" "$altVCF"]
                }
                if {$TRArescue} {
                    set deb2 "${chrom2}_${posVCF2}_${end2}_${svtype}"
                    set AnnotSV_ID2 [settingOfTheAnnotSVID $deb2 "N" $altVCF2]
                    set TextToWrite_rescue($AnnotSV_ID2) "$chrom2\t$pos2\t$end2\t$svtype\t[join $L_samplesid ","]\t[lindex $L2s 2]\t$refVCF\t$altVCF\t[join [lrange $L2s 5 end] "\t"]"
                    set VCFline_rescue($AnnotSV_ID2) $VCFlineNumber
                }
            } else {
                # SVinputInfo = 0
                set deb "${chrom}_${posVCF}_${end}_${svtype}"
                set AnnotSV_ID [settingOfTheAnnotSVID $deb $ref $alt]
                if {$BNDrescue} {
                    set TextToWrite_rescue($AnnotSV_ID) "$chrom\t$pos\t$end\t$svtype\t[join $L_samplesid ","]\t$refVCF\t$altVCF\t[join [lrange $Ls 8 end] "\t"]"
                    set VCFline_rescue($AnnotSV_ID) $VCFlineNumber
                } else {
                    lappend L_TextToWrite "$chrom\t$pos\t$end\t$svtype\t[join $L_samplesid ","]\t$refVCF\t$altVCF\t[join [lrange $Ls 8 end] "\t"]"
                    if {$SquareBracketedSV} {
                        if {$svtype eq "TRA"} {
                            set idTRA "${chrom}_${posVCF}_${end}_${svtype}_${ref}_<TRA>"
                            lappend L_squBrack_SV_ID_Written "$idTRA"
                        } else {
                            lappend L_squBrack_SV_ID_Written "$AnnotSV_ID"
                        }
                    }
                }
                if {$TRArescue} {
                    set deb2 "${chrom2}_${posVCF2}_${end2}_${svtype}"
                    set AnnotSV_ID2 [settingOfTheAnnotSVID $deb2 "N" $altVCF2]
                    set TextToWrite_rescue($AnnotSV_ID2) "$chrom2\t$pos2\t$end2\t$svtype\t[join $L_samplesid ","]\t$refVCF\t$altVCF\t[join [lrange $L2s 8 end] "\t"]"
                    set VCFline_rescue($AnnotSV_ID2) $VCFlineNumber
                }
            }
            
            # Definition of g_SVLEN:
            # (If not defined here, the variant length can be calculated in AnnotSV-write.tcl for some type of SV)
            if {$svlen ne ""} {
                set g_SVLEN($AnnotSV_ID) $svlen
                if {$TRArescue} {
                    set g_SVLEN($AnnotSV_ID2) 0
                }
            }
        }
        if {![regexp -nocase ".gz$" $VCFfile]} {close $f}
        
        
        # Warning for the unknown GT
        ############################
        if {$g_AnnotSV(missingGTinSamplesid)} {
            if {$nUnknownGT > 1} {
                puts "\t...WARNING: $nUnknownGT missing alleles (./. or .\|.) found in the GT field of reported SV"
                puts "\t            Corresponding samples have been reported in the \"Samples_ID\" output field\n"
            } elseif {$nUnknownGT eq 1} {
                puts "\t...WARNING: 1 missing allele (./. or .\|.) found in the GT field of reported SV"
                puts "\t            Corresponding samples have been reported in the \"Samples_ID\" output field\n"
            } else {puts "\n"}
        }
        
        # Writing of the BED file
        #########################
        WriteTextInFile [join $L_TextToWrite "\n"] $SV_BEDfile
        
        # Writing of the BND rescue lines (if needed)
        #############################################
        set L_TextToWrite {}
        foreach SV_ID [array names TextToWrite_rescue] {
            if {[lsearch -exact $L_squBrack_SV_ID_Written "$SV_ID"] eq -1} {
                lappend L_TextToWrite $TextToWrite_rescue($SV_ID)
            } else {
                WriteTextInFile "$SV_ID: reciprocal breakend (line $VCFline_rescue($SV_ID))" $unannotatedOutputFile
            }
        }
        WriteTextInFile [join $L_TextToWrite "\n"] $SV_BEDfile
        
        if {$g_AnnotSV(candidateSnvIndelFiles) ne "" && $GTabsent} {
            puts "...parsing of $SV_VCFfiles"
            puts "\t...WARNING: The SV genotype is not indicated in the FORMAT column under the “GT” field"
            puts "\t            => Compound heterozygosity analysis won't be processed!\n"
            set g_AnnotSV(candidateSnvIndelFiles)   ""
            set g_AnnotSV(candidateSnvIndelSamples) ""
        }
        
        if {$VCFheader eq ""} { ; # No header in the VCF input file
            #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  HG00096
            if {$g_AnnotSV(SVinputInfo)} {
                set length [llength [lrange $Ls 9 end]]
                set VCFheader "SV_type\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\t[join [lrepeat $length ""] "\t"]"
            } else {
                set length [llength [lrange $Ls 8 end]]
                set VCFheader "SV_type\tREF\tALT\t[join [lrepeat $length ""] "\t"]"
            }
        }
        
    }
    
    # Bedfile should be sorted and should not have "chr" in the first column
    # -> This treatment will be done in the 'genesAnnotation' proc
    
    ## Bedfile: no SV to annotate if it is an empty file, or a file with only SNV/indel
    if {[isAnEmptyFile $SV_BEDfile]} {
        puts "############################################################################"
        puts "No SV to annotate in the SVinputFile - Exit without error."
        puts "############################################################################"
        exit 0
    }
    
    # Unset the global variables "g_ID" and "g_deb" before to set the AnnotSV_ID variables in AnnotSV-write.tcl
    unset g_ID
    unset g_deb
    
    return "$SV_BEDfile"
}



================================================
FILE: share/tcl/AnnotSV/AnnotSV-write.tcl
================================================
############################################################################################################
# AnnotSV 3.5.8                                                                                            #
#                                                                                                          #
# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #
#                                                                                                          #
# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #
#                                                                                                          #
# This is part of AnnotSV source code.                                                                     #
#                                                                                                          #
# This program is free software; you can redistribute it and/or                                            #
# modify it under the terms of the GNU General Public License                                              #
# as published by the Free Software Foundation; either version 3                                           #
# of the License, or (at your option) any later version.                                                   #
#                                                                                                          #
# This program is distributed in the hope that it will be useful,                                          #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the                                             #
# GNU General Public License for more details.                                                             #
#                                                                                                          #
# You should have received a copy of the GNU General Public License                                        #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #
############################################################################################################


# Switch coordinates from BED to VCF format.
# Input: chr1:12356-12359 (BED format)
# Output: chr1:12357-12359 (VCF format)
proc switchCoordinatesFromBEDtoVCF {BEDcoord} {
    set liste [split $BEDcoord ":|-"]
    if {[llength $liste] ne 3} {
        return $BEDcoord
    } else {
        set VCFcoord "[lindex $liste 0]:[expr {[lindex $liste 1]+1}]-[lindex $liste 2]"
        return $VCFcoord
    }
}

proc switchAllCoordinatesFromBEDtoVCFinLine {lineCompleted} {
    # lineCompleted: AnnotSV_ID              chrom   SV_start   ...
    # e.g.           15_1_20000000_DEL_1     15      1          ...
    
    # Formate "AnnotSV_ID" and "SV_start"
    # (switch SV start coordinate from BED to VCF format)
    #####################################################
    regexp "^\[^\t\]+\t\[^\t\]+\t(\[0-9\]+)" $lineCompleted match SVstart_BED
    set SVstart_VCF [expr {$SVstart_BED+1}]
    
    # Formate "AnnotSV_ID"
    set AnnotSV_ID [lindex $lineCompleted 0]
    set L_AnnotSV_ID [split $AnnotSV_ID "_"]
    set updated_AnnotSV_ID [lindex $L_AnnotSV_ID 0]_${SVstart_VCF}_[lindex $L_AnnotSV_ID 2]_[lindex $L_AnnotSV_ID 3]_[lindex $L_AnnotSV_ID 4]
    set length_AnnotSV_ID [expr {[string length $AnnotSV_ID]-1}]
    set lineCompleted [string replace $lineCompleted 0 $length_AnnotSV_ID $updated_AnnotSV_ID]
    
    # Formate "SV_start"
    set chrom [lindex $lineCompleted 1]
    set length_chrom [string length $chrom]
    set length_updated_AnnotSV_ID [string length $updated_AnnotSV_ID]
    set lengthTot [expr {$length_updated_AnnotSV_ID+$length_chrom+1}]
    if {[regexp -start $lengthTot -indices "$SVstart_BED" $lineCompleted match_indices]} {
        set i_start [lindex $match_indices 0]
        set i_end   [lindex $match_indices 1]
        set lineCompleted [string replace $lineCompleted $i_start $i_end $SVstart_VCF]
    }
    
    # Formate all genomic coordinates (e.g.: 2:1235-62531)
    set i 0
    while {[regexp -start $i -indices "\[0-9XYMT\]+:\[0-9\]+-\[0-9\]+" $lineCompleted match_indices]} {
        set i_start [lindex $match_indices 0]
        set i_end   [lindex $match_indices 1]
        set BEDcoord [string range $lineCompleted $i_start $i_end]
        set lineCompleted [string replace $lineCompleted $i_start $i_end [switchCoordinatesFromBEDtoVCF $BEDcoord]]
        set i [expr {$i_end+1}]
    }
    
    return $lineCompleted
}


proc OrganizeAnnotation {} {
    
    global g_AnnotSV
    global g_Lgenes
    global VCFheader
    global g_numberOfAnnotationCol
    global headerFileToRemove
    global g_SVLEN
    global g_ExtAnnotation
    global g_rankingScore
    global g_rankingExplanations
    global g_re
    global g_HITS
    
    # OUTPUT
    ###############
    set FullAndSplitBedFile "$g_AnnotSV(outputDir)/$g_AnnotSV(outputFile).tmp" ;# created in AnnotSV-genes.tcl
    set outputFile "$g_AnnotSV(outputDir)/$g_AnnotSV(outputFile)"
    
    #########################################################################################
    ################### Writing of the header (first line of the output) ####################
    #########################################################################################
    set headerOutput "AnnotSV_ID\tSV_chrom\tSV_start\tSV_end\tSV_length" ;# "AnnotSV_ID" and "SV_start" indices used in the switchAllCoordinatesFromBEDtoVCFinLine procedure
    if {[info exist VCFheader]} {
        # SVinputFile = VCF
        append headerOutput "\t$VCFheader"
        set theBEDlength [expr {[llength [split $headerOutput "\t"]]-2}] ; # we remove "2" for the 2 columns not in the input file ("AnnotSV ID" and "SV length")
        if {$g_AnnotSV(SVinputInfo)} {
            set g_AnnotSV(formatColNumber) 10 ;# used in AnnotSV-filteredVCF.tcl
        } else {
            set g_AnnotSV(formatColNumber) 6
        }
        if {[lsearch -exact $g_AnnotSV(outputColHeader) "Samples_ID"] ne "-1"} {
            incr g_AnnotSV(formatColNumber) +1
        }
        set g_AnnotSV(SVinputInfo) 1 ; # The created bedfile contains only the info to report
    } else {
        # SVinputFile = BED
        if {$g_AnnotSV(SVinputInfo)} {
            # The user wants to keep all the columns from the SV BED input file
            regsub -nocase "(.formatted)?(.sorted)?.bed$" $g_AnnotSV(bedFile) ".header.tsv" headerSVinputFile
            set theBEDlength [llength [split [FirstLineFromFile $g_AnnotSV(bedFile)] "\t"]] ;# theBEDlength = number of col in the SV input BED file
            
            # $headerSVinputFile created if needed in the proc "createBEDinputHeaderFile"
            set headerFromTheUser [split [FirstLineFromFile $headerSVinputFile] "\t"]
            if {[llength $headerFromTheUser] ne $theBEDlength} { ;# A stupid error can be to have a "\t" at the end of the header line
                puts "Numbers of columns from $g_AnnotSV(SVinputFile) and $headerSVinputFile are different ($theBEDlength != [llength $headerFromTheUser])"
                puts "=> Can not report: $headerFromTheUser"
            } else {
                if {$g_AnnotSV(svtBEDcol) ne -1} {
                    set headerFromTheUser [lreplace $headerFromTheUser $g_AnnotSV(svtBEDcol) $g_AnnotSV(svtBEDcol) "SV_type"]
                }
                if {$g_AnnotSV(samplesidBEDcol) ne -1} {
                    set headerFromTheUser [lreplace $headerFromTheUser $g_AnnotSV(samplesidBEDcol) $g_AnnotSV(samplesidBEDcol) "Samples_ID"]
                }
                
                set k 1
                foreach colName [lrange $headerFromTheUser 3 end] {
                    if {$colName ne ""} {
                        append headerOutput "\t$colName"
                    } else {
                        append headerOutput "\tuser#$k"; incr k
                    }
                }
            }
        } else {
            # At least the "SV_type" and the "samples_ID" columns should be reported for the ranking
            if {$g_AnnotSV(svtTSVcol) ne -1} {
                append headerOutput "\tSV_type"
            }
            if {$g_AnnotSV(samplesidTSVcol) eq -1} {
                regsub -nocase "(.formatted)?(.sorted)?.bed$" $g_AnnotSV(bedFile) ".header.tsv" headerSVinputFile
                set g_AnnotSV(samplesidTSVcol) [lsearch -exact [split [FirstLineFromFile $headerSVinputFile] "\t"] "Samples_ID"]
            }
            append headerOutput "\tSamples_ID"
        }
    }
    append headerOutput "\tAnnotation_mode"
    if {$g_AnnotSV(cytoband)} {
        if {[lsearch -exact "$g_AnnotSV(outputColHeader)" "CytoBand"] eq -1} {
            set g_AnnotSV(cytoband) 0
        } else {
            append headerOutput "\tCytoBand"
        }
    }
    append headerOutput "\tGene_name\tClosest_left\tClosest_right\tGene_count\tTx\tTx_version\tTx_start\tTx_end\tOverlapped_tx_length\tOverlapped_CDS_length\tOverlapped_CDS_percent\tFrameshift\tExon_count\tLocation\tLocation2\tDist_nearest_SS\tNearest_SS_type\tIntersect_start\tIntersect_end\tRE_gene"
    
    ### Search for "ref" and "alt" information (to define the AnnotSV_ID)
    set i_ref [lsearch -exact [split $headerOutput "\t"] "REF"]
    set i_alt [lsearch -exact [split $headerOutput "\t"] "ALT"]
    set i_ref [expr {$i_ref-2}] ;# (-2) because of the insertion of the END and SVTYPE values.
    set i_alt [expr {$i_alt-2}] ;# (-2) because of the insertion of the END and SVTYPE values.
    
    ####### "Pathogenic SV header"
    if {$g_AnnotSV(organism) eq "Human"} {
        foreach svtype "gain loss ins inv" {
            if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^P_${svtype}_"] eq -1} { continue }
            append headerOutput "\tP_${svtype}_phen\tP_${svtype}_hpo\tP_${svtype}_source\tP_${svtype}_coord"
        }
    }
    
    ####### "Partially overlapped pathogenic SV header"
    if {$g_AnnotSV(organism) eq "Human"} {
        foreach svtype "gain loss" {
            if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^po_P_${svtype}_"] eq -1} { continue }
            append headerOutput "\tpo_P_${svtype}_phen\tpo_P_${svtype}_hpo\tpo_P_${svtype}_source\tpo_P_${svtype}_coord\tpo_P_${svtype}_percent"
        }
    }
    
    ####### "Pathogenic snv/indel header"
    if {$g_AnnotSV(organism) eq "Human"} {
        if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^P_snvindel_"] ne -1} {
            append headerOutput "\tP_snvindel_nb\tP_snvindel_phen"
        }
    }
    
    ####### "Benign SV header"
    if {$g_AnnotSV(organism) eq "Human"} {
        foreach svtype "gain loss ins inv" {
            if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^B_${svtype}_"] eq -1} { continue }
            append headerOutput "\tB_${svtype}_source\tB_${svtype}_coord\tB_${svtype}_AFmax"
        }
    }
    
    ####### "Partially overlapping benign SV header"
    if {$g_AnnotSV(organism) eq "Human"} {
        foreach svtype "gain loss" {
            if {[lsearch -regexp "$g_AnnotSV(outputColHeader)" "^po_B_${svtype}_"] eq -1} { continue }
            append headerOutput "\tpo_B_${svtype}_allG_source\tpo_B_${svtype}_allG_coord"
            append headerOutput "\tpo_B_${svtype}_someG_source\tpo_B_${svtype}_someG_coord"
        }
    }
    
    ####### usersDir: "SVincludedInFt header"
    set usersDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Users/$g_AnnotSV(genomeBuild)"
    if {[glob -nocomplain $usersDir/SVincludedInFt/*.formatted.sorted.bed] ne ""} {
        foreach formattedUserBEDfile [glob -nocomplain $usersDir/SVincludedInFt/*.formatted.sorted.bed] {
            regsub -nocase ".formatted.sorted.bed$" $formattedUserBEDfile ".header.tsv" userHeaderFile
            set L1header [split [FirstLineFromFile $userHeaderFile] "\t"]
            set L_ann_ColName_from_header [lrange $L1header 3 end]
            lappend SVincludedInFtHeader "[join $L_ann_ColName_from_header "\t"]"
        }
        append headerOutput "\t[join $SVincludedInFtHeader "\t"]"
    }
    
    ####### "TAD header"
    if {$g_AnnotSV(tadAnn)} {
        set g_AnnotSV(tadAnn_i) ""
        set j 0
        foreach col "TAD_coordinate ENCODE_experiment" {
            if {[lsearch -exact "$g_AnnotSV(outputColHeader)" $col] ne -1} {
                append headerOutput "\t$col"
                lappend g_AnnotSV(tadAnn_i) $j
            }
            incr j
        }
        if {$g_AnnotSV(tadAnn_i) eq ""} {set g_AnnotSV(tadAnn) 0}
    }
    
    ####### "VCF files header"
    if {$g_AnnotSV(snvIndelFiles) ne ""} {
        foreach sample $g_AnnotSV(snvIndelSamples) {
            append headerOutput "\tCount_hom($sample)\tCount_htz($sample)\tCount_htz/allHom($sample)\tCount_htz/total(cohort)"
        }
        append headerOutput "\tCount_total(cohort)"
    }
    if {$g_AnnotSV(candidateSnvIndelFiles) ne ""} {
        foreach sample $g_AnnotSV(candidateSnvIndelSamples) {
            append headerOutput "\tcompound_htz($sample)"
        }
    }
    
    #######  usersDir: "FtIncludedInSV header"
    if {[glob -nocomplain $usersDir/FtIncludedInSV/*.formatted.sorted.bed] ne ""} {
        foreach formattedUserBEDfile [glob -nocomplain $usersDir/FtIncludedInSV/*.formatted.sorted.bed] {
            regsub -nocase ".formatted.sorted.bed$" $formattedUserBEDfile ".header.tsv" userHeaderFile
            set L1header   [split [FirstLineFromFile $userHeaderFile] "\t"]
            set L_ann_ColName_from_header [lrange $L1header 3 end]
            lappend FtIncludedInSVHeader "[join $L_ann_ColName_from_header "\t"]"
        }
        append headerOutput "\t[join $FtIncludedInSVHeader "\t"]"
    }
    
    #######  usersDir: "AnyOverlap header"
    if {[glob -nocomplain $usersDir/AnyOverlap/*.formatted.sorted.bed] ne ""} {
        foreach formattedUserBEDfile [glob -nocomplain $usersDir/AnyOverlap/*.formatted.sorted.bed] {
            regsub -nocase ".formatted.sorted.bed$" $formattedUserBEDfile ".header.tsv" userHeaderFile
            set L1header   [split [FirstLineFromFile $userHeaderFile] "\t"]
            set L_ann_ColName_from_header [lrange $L1header 3 end]
            lappend AnyOverlapHeader "[join $L_ann_ColName_from_header "\t"]"
        }
        append headerOutput "\t[join $AnyOverlapHeader "\t"]"
    }
    
    #######  usersDir: "BNDproximity header"
    if {[glob -nocomplain $usersDir/BNDproximity/*.formatted.sorted.bed] ne ""} {
        foreach formattedUserBEDfile [glob -nocomplain $usersDir/BNDproximity/*.formatted.sorted.bed] {
            regsub -nocase ".formatted.sorted.bed$" $formattedUserBEDfile ".header.tsv" userHeaderFile
            set L1header   [split [FirstLineFromFile $userHeaderFile] "\t"]
            set L_ann_ColName_from_header [lrange $L1header 3 end]
            lappend BNDproximityHeader "[join $L_ann_ColName_from_header "\t"]"
        }
        append headerOutput "\t[join $BNDproximityHeader "\t"]"
    }
    
    ####### "Breakpoints header"
    if {$g_AnnotSV(gcContentAnn)} {
        append headerOutput "\tGC_content_left\tGC_content_right"
    }
    if {$g_AnnotSV(repeatAnn)} {
        append headerOutput "\tRepeat_coord_left\tRepeat_type_left\tRepeat_coord_right\tRepeat_type_right"
    }
    if {$g_AnnotSV(gapAnn)} {
        append headerOutput "\tGap_left\tGap_right"
    }
    if {$g_AnnotSV(segdupAnn)} {
        append headerOutput "\tSegDup_left\tSegDup_right"
    }
    if {$g_AnnotSV(ENCODEblacklistAnn)} {
        append headerOutput "\tENCODE_blacklist_left\tENCODE_blacklist_characteristics_left\tENCODE_blacklist_right\tENCODE_blacklist_characteristics_right"
    }
    
    ####### "Gene-based header"
    if {$g_AnnotSV(geneBasedAnn)} {
        set L_allGeneBasedHeader ""
        if {[info exists g_AnnotSV(extann)] && $g_AnnotSV(extann) ne ""} { ; # g_AnnotSV(extann) defined in the main
            ExternalAnnotations
            foreach F [ExternalAnnotations L_Files] {
                # we remove the first "genes" column (not reported in output, used as an ID)
                regsub "\[^\t\]+\t" [ExternalAnnotations $F Header] "" extannHeader
                lappend L_allGeneBasedHeader {*}[split $extannHeader "\t"]
            }
        }
        set g_AnnotSV(geneBasedAnn_i) ""
        set j 0
        foreach col "$L_allGeneBasedHeader" {
            if {[lsearch -exact "$g_AnnotSV(outputColHeader)" $col] ne -1} {
                append headerOutput "\t$col"
                lappend g_AnnotSV(geneBasedAnn_i) $j
            }
            incr j
        }
        if {$g_AnnotSV(geneBasedAnn_i) eq ""} {set g_AnnotSV(geneBasedAnn) 0}
    }
    
    ####### "PhenoGenius header"
    if {$g_AnnotSV(PhenoGeniusCli)} {
        append headerOutput "\tPhenoGenius_score\tPhenoGenius_phenotype\tPhenoGenius_specificity"
    }
    
    ####### "Exomiser header"
    if {$g_AnnotSV(hpo) ne ""} {
        append headerOutput "\tExomiser_gene_pheno_score\tHuman_pheno_evidence\tMouse_pheno_evidence\tFish_pheno_evidence"
    }
    
    # Preparation for the ranking (from benign to pathogenic)
    SVprepareRanking $headerOutput    ; # svtTSVcol (for VCF input file) is defined there
    
    ####### "Ranking header"
    if {$g_AnnotSV(organism) eq "Human"} {
        if {$g_AnnotSV(svtTSVcol) eq -1} { ; # SV_type is required for the ranking of human SV
            puts "\nWARNING: AnnotSV requires the SV type (duplication, deletion...) to classify the SV"
            puts "         Not provided (svtBEDcol = -1)"
            puts "         => No SV ranking (ACMG_class feature will be set to \"NA\")\n"
            set g_AnnotSV(ranking) 0
            
            if {![regexp "NA" $g_AnnotSV(rankFiltering)]} {
                puts "\nWARNING: -rankFiltering = $g_AnnotSV(rankFiltering)"
                puts "         => SV with \"ACMG_class = NA\" will be filtered out"
                puts "         => All the SV will be filtered out\n"
            }
        } else {
            if {![regexp "NA" $g_AnnotSV(rankFiltering)]} {
                puts "\nWARNING: -rankFiltering = $g_AnnotSV(rankFiltering)"
                puts "         => SV with \"ACMG_class = NA\" will be filtered out\n"
            }
        }
        append headerOutput "\tAnnotSV_ranking_score"
        append headerOutput "\tAnnotSV_ranking_criteria"
        append headerOutput "\tACMG_class"
    }
    
    ReplaceTextInFile $headerOutput $outputFile
    
    
    
    ##################################################################################
    ################### Display of the annotations to be realized ####################
    ##################################################################################
    puts "...listing of the annotations to be realized ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    if {$g_AnnotSV(cytoband)} {
        puts "\t...CytoBand annotation"
    }
    puts "\t...Genes annotation"
    puts "\t\t...$g_AnnotSV(tx) annotation"
    
    ####### "Regulatory elements annotations"
    puts "\t...Regulatory elements annotations"
    if {$g_AnnotSV(promAnn)} {puts "\t\t...Promoter annotations"}
    if {$g_AnnotSV(EAann)} {puts "\t\t...EnhancerAtlas annotations"}
    if {$g_AnnotSV(GHann)} {puts "\t\t...GeneHancer annotations"}
    if {$g_AnnotSV(miRNAann)} {puts "\t\t...MiRTargetLink annotations"}
    if {$g_AnnotSV(ABCann)} {puts "\t\t...ABC annotations"}
    if {$g_AnnotSV(MPRAann)} {puts "\t\t...MPRA annotations"}
    
    #######  Annotations with pathogenic genes or genomic regions (FtIncludedInSV)
    if {$g_AnnotSV(organism) eq "Human"} {
        puts "\t...Annotations with pathogenic genes or genomic regions"
        puts "\t\t...dbVar annotation"
        puts "\t\t...ClinVar annotation"
        puts "\t\t...ClinGen annotation"
    }
    
    #######  Annotations with pathogenic snv/indel(FtIncludedInSV)
    if {$g_AnnotSV(organism) eq "Human"} {
        puts "\t...Annotations with pathogenic snv/indel"
    }
    
    #######  Annotations with benign genes or genomic regions (SVincludedInFt)
    if {$g_AnnotSV(organism) eq "Human"} {
        puts "\t...Annotations with benign genes or genomic regions"
        puts "\t\t...gnomAD annotation"
        puts "\t\t...ClinVar annotation"
        puts "\t\t...ClinGen annotation"
        puts "\t\t...DGV annotation"
        puts "\t\t...DDD annotation"
        puts "\t\t...1000g annotation"
        puts "\t\t...Ira M. Hall's lab annotation"
        puts "\t\t...Children’s Mercy Research Institute"
    }
    
    ####### Custom "SVincludedInFt"
    set L_files_SVincludedInFt [glob -nocomplain $usersDir/SVincludedInFt/*.formatted.sorted.bed]
    if {$L_files_SVincludedInFt ne ""} {
        puts "\t...Annotations with features overlapping the SV ($g_AnnotSV(overlap) %)"
        foreach formattedUserBEDfile $L_filesSVincludedInFt {
            puts "\t\t...[file tail $formattedUserBEDfile]"
            regsub -nocase ".formatted.sorted.bed$" $formattedUserBEDfile ".header.tsv" userHeaderFile
            set L1header [split [FirstLineFromFile $userHeaderFile] "\t"]
            set L_ann_ColName_from_header [lrange $L1header 3 end]
            # Number of columns of annotation in the user bedfile (without the 3 columns "chrom start end")
            set nColHeader [llength $L_ann_ColName_from_header]
            puts "\t\t($nColHeader annotations columns: [join $L_ann_ColName_from_header ", "])"
        }
    }
    
    ####### Custom "FtIncludedInSV"
    set L_files_FtincludedInSV [glob -nocomplain $usersDir/FtIncludedInSV/*.formatted.sorted.bed]
    if {$L_files_FtincludedInSV ne "" || $g_AnnotSV(tadAnn)} {
        puts "\t...Annotations with features overlapped with the SV ($g_AnnotSV(overlap) %)"
    }
    if {$g_AnnotSV(tadAnn)} {puts "\t\t...TAD annotation"}
    foreach formattedUserBEDfile $L_files_FtincludedInSV {
        puts "\t\t...[file tail $formattedUserBEDfile]"
        regsub -nocase ".formatted.sorted.bed$" $formattedUserBEDfile ".header.tsv" userHeaderFile
        set L1header   [split [FirstLineFromFile $userHeaderFile] "\t"]
        set L_ann_ColName_from_header [lrange $L1header 3 end]
        # Number of columns of annotation in the user bedfile (without the 3 columns "chrom start end")
        set nColHeader [llength $L_ann_ColName_from_header]
        puts "\t\t($nColHeader annotations columns: [join $L_ann_ColName_from_header ", "])"
    }
    
    ####### Custom "AnyOverlap"
    set L_files_AnyOverlap [glob -nocomplain $usersDir/AnyOverlap/*.formatted.sorted.bed]
    if {$L_files_AnyOverlap ne ""} {
        puts "\t...Annotations with features sharing any overlap with the SV"
    }
    foreach formattedUserBEDfile $L_files_AnyOverlap {
        puts "\t\t...[file tail $formattedUserBEDfile]"
        regsub -nocase ".formatted.sorted.bed$" $formattedUserBEDfile ".header.tsv" userHeaderFile
        set L1header   [split [FirstLineFromFile $userHeaderFile] "\t"]
        set L_ann_ColName_from_header [lrange $L1header 3 end]
        # Number of columns of annotation in the user bedfile (without the 3 columns "chrom start end")
        set nColHeader [llength $L_ann_ColName_from_header]
        puts "\t\t($nColHeader annotations columns: [join $L_ann_ColName_from_header ", "])"
    }
    
    ####### Custom "BNDproximity"
    set L_files_BNDproximity [glob -nocomplain $usersDir/BNDproximity/*.formatted.sorted.bed]
    if {$L_files_BNDproximity ne ""} {
        puts "\t...Annotations with features sharing very close BND with the SV"
    }
    foreach formattedUserBEDfile $L_files_BNDproximity {
        puts "\t\t...[file tail $formattedUserBEDfile]"
        regsub -nocase ".formatted.sorted.bed$" $formattedUserBEDfile ".header.tsv" userHeaderFile
        set L1header   [split [FirstLineFromFile $userHeaderFile] "\t"]
        set L_ann_ColName_from_header [lrange $L1header 3 end]
        # Number of columns of annotation in the user bedfile (without the 3 columns "chrom start end")
        set nColHeader [llength $L_ann_ColName_from_header]
        puts "\t\t($nColHeader annotations columns: [join $L_ann_ColName_from_header ", "])"
    }
    
    ####### "Breakpoints annotations"
    puts "\t...Breakpoints annotations"
    if {$g_AnnotSV(gcContentAnn)} {puts "\t\t...GC content annotation"}
    if {$g_AnnotSV(repeatAnn)} {puts "\t\t...Repeat annotation"}
    if {$g_AnnotSV(gapAnn)} {puts "\t\t...Gap annotation"}
    if {$g_AnnotSV(segdupAnn)} {puts "\t\t...Segmental duplication annotation"}
    if {$g_AnnotSV(ENCODEblacklistAnn)} {puts "\t\t...ENCODE blacklist annotation"}
    
    ####### "Gene-based annotations"
    if {$g_AnnotSV(geneBasedAnn)} {
        puts "\t...Gene-based annotations"
        puts "[join $g_ExtAnnotation(display) "\n"]"
    }
    
    ####### "PhenoGenius annotations"
    if {$g_AnnotSV(PhenoGeniusCli)} {puts "\t...PhenoGenius annotations"}
    
    ####### "Exomiser annotation"
    if {$g_AnnotSV(hpo) ne ""} {puts "\t...Exomiser annotations"}
    
    
    
    
    ########################################################################
    ################### Display: annotation in progress ####################
    ########################################################################
    puts "\n...annotation in progress ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    
    
    
    #######################################################################################################
    ##   Prepare the intersection between "SV / genes" and "annotation BED files" (benign SV...):
    ##
    ##   => creation of $g_AnnotSV(fullAndSplitBedFile),
    ##      a bedfile with the coordinates (only 3 columns: chrom, start and end) of:
    ##      - the SV to annotate (full)
    ##      - the intersections with genes (split)
    #######################################################################################################
    set g_AnnotSV(fullAndSplitBedFile) "$g_AnnotSV(outputDir)/[file tail $g_AnnotSV(bedFile)].users.bed"
    file delete -force $g_AnnotSV(fullAndSplitBedFile)
    set L_UsersText {}
    
    set f [open "$FullAndSplitBedFile"]
    while {! [eof $f]} {
        set L [gets $f]
        if {$L eq ""} {continue}
        set Ls [split $L "\t"]
        set AnnotationMode [lindex $Ls end]
        if {$AnnotationMode eq "split"} {
            set SVchrom [lindex $Ls 0]
            set SVleft  [lindex $Ls 1]
            set SVright [lindex $Ls 2]
            set exonStarts [lindex $Ls end-5]
            set exonEnds   [lindex $Ls end-4]
            set tx_left [lindex [split $exonStarts ","] 0]
            set tx_right [lindex [split $exonEnds ","] end-1]
            if {$SVleft<$tx_left} {set intersectStart "$tx_left"} else {set intersectStart "$SVleft"}
            if {$SVright<$tx_right} {set intersectEnd "$SVright"} else {set intersectEnd "$tx_right"}
            lappend L_UsersText "$SVchrom\t$intersectStart\t$intersectEnd"
        } else {
            lappend L_UsersText "[join [lrange $Ls 0 2] "\t"]"
        }
    }
    close $f
    set L_UsersText [lsort -unique $L_UsersText]
    WriteTextInFile [join $L_UsersText "\n"] $g_AnnotSV(fullAndSplitBedFile)
    checkBed $g_AnnotSV(fullAndSplitBedFile)
    regsub -nocase ".bed$" $g_AnnotSV(fullAndSplitBedFile) ".formatted.bed" newFullAndSplitBedFile
    
    # Sorting of the bedfile:
    # Intersection with very large files can cause trouble with excessive memory usage.
    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.
    set g_AnnotSV(fullAndSplitBedFile) "$g_AnnotSV(outputDir)/[file tail $g_AnnotSV(bedFile)].users.sorted.bed"
    set sortTmpFile "$g_AnnotSV(outputDir)/[clock format [clock seconds] -format "%Y%m%d-%H%M%S"]_[pid]_sort.tmp.bash"
    ReplaceTextInFile "#!/bin/bash" $sortTmpFile
    WriteTextInFile "# The locale specified by the environment can affects the traditional sort order. We need to use native byte values." $sortTmpFile
    WriteTextInFile "export LC_ALL=C" $sortTmpFile
    WriteTextInFile "sort -k1,1 -k2,2n $newFullAndSplitBedFile > $g_AnnotSV(fullAndSplitBedFile)" $sortTmpFile
    file attributes $sortTmpFile -permissions 0755
    if {[catch {eval exec bash $sortTmpFile} Message]} {
        puts "-- OrganizeAnnotation --"
        puts "sort -k1,1 -k2,2n $newFullAndSplitBedFile > $g_AnnotSV(fullAndSplitBedFile)"
        puts "$Message"
        puts "Exit with error"
        exit 2
    }
    file delete -force $sortTmpFile
    file delete -force $newFullAndSplitBedFile
    unset L_UsersText
    
    
    
    
    ########################################################################
    ################### Parse the "FullAndSplitBedFile" ####################
    ########################################################################
    
    # FullAndSplitBedFile: Coordinates 0-based!!!
    
    set f [open "$FullAndSplitBedFile"]
    
    while {! [eof $f]} {
        set L [gets $f]
        if {$L eq ""} {continue}
        set Ls [split $L "\t"]
        
        # Full + split
        set SVchrom   [lindex $Ls 0]
        set SVleft    [lindex $Ls 1]
        set SVright   [lindex $Ls 2]
        
        set AnnotationMode   [lindex $Ls end]                 ;# full or split
        # SVtype is not normalized here
        if {$g_AnnotSV(svtBEDcol) ne -1} {
            set SVtype [lindex $Ls "$g_AnnotSV(svtBEDcol)"]                     ;# DEL, DUP, <CN0>...
        } else {
            set SVtype ""
        }
        
        if {$g_AnnotSV(samplesidBEDcol) ne -1} {
            set Samplesid [lindex $Ls "$g_AnnotSV(samplesidBEDcol)"]
        } else {
            set Samplesid ""
        }
        
        if {$AnnotationMode eq "split"} {
            # split
            set txStart    [lindex $Ls end-12]
            set txEnd      [lindex $Ls end-11]
            set strand     [lindex $Ls end-10]
            set geneName   [lindex $Ls end-9]
            set NbGenes    ""
            set transcript [lindex $Ls end-8]
            set transcript_version [transcriptVersionAnnotation $transcript]
            set CDSstart   [lindex $Ls end-7]
            set CDSend     [lindex $Ls end-6]
            set exonStarts [lindex $Ls end-5]
            set exonEnds   [lindex $Ls end-4]
            set CDSl       [lindex $Ls end-3]
            set CDSpercent [lindex $Ls end-2]
            set txL        [lindex $Ls end-1]
            set locationStart ""
            set locationEnd ""
            set distNearestSSright ""
            set distNearestSSrightA ""
            set distNearestSSrightB ""
            set distNearestSSleft ""
            set distNearestSSleftA ""
            set distNearestSSleftB ""
            set distNearestSS ""
            set nearestSStypeRight ""
            set nearestSStypeLeft ""
            set nearestSStype ""
            set regionStart ""
            set regionEnd ""
            set intersectStart ""
            set intersectEnd ""
            set nbExons [expr {[llength [split $exonStarts ","]]-1}]
            
            # frameshift
            set SVtype_norm [normalizeSVtype $SVtype]
            if {[string is integer $CDSl]} {
                if {$SVtype_norm eq "DEL" || $SVtype_norm eq "DUP"} {
                    # Deletion
                    if {$CDSl eq 0} {
                        # Outside the CDS
                        set frameshift "NA"
                    } elseif {[expr {$CDSl%3}] eq 0} {
                        # Number of nucleotides overlapped is a multiple of 3
                        set frameshift "no"
                    } else {
                        # number of nucleotides overlapped is not a multiple of 3
                        set frameshift "yes"
                    }
                } elseif {$SVtype_norm eq "INS"} {
                    # Insertion
                    if {![info exists g_SVLEN($AnnotSV_ID)] || ![string is integer $g_SVLEN($AnnotSV_ID)]} {
                        # Insertion length is unknown
                        set frameshift "NA"
                    } elseif {[expr {$g_SVLEN($AnnotSV_ID)%3}] eq 0} {
                        # Insertion length is a multiple of 3. The reading frame is preserved,
                        # but the inserted sequence may still have functional consequences (e.g. introduction of a premature stop codon)
                        set frameshift "NA"
                    } else {
                        # Insertion length is not a multiple of 3
                        # We do not yet know if the INS is in the CDS at the moment. This will be checked later with the value "location2".
                        set frameshift "yes"
                    }
                } else {
                    # Translocations, Inversions, and other SV types
                    set frameshift "NA"
                }
            } else {set frameshift "NA"}
            
        } else {
            set SV "[join [lrange $Ls 0 2] "\t"]"
            # full
            if {[info exists g_Lgenes($SV)]} {
                set geneName "$g_Lgenes($SV)"  ; # SV/oldSV defined with: "chrom, start, end, SVtype":	    set transcript         ""
                set NbGenes "[llength [split $g_Lgenes($SV) ";"]]"
            } else {
                set geneName ""
                set NbGenes 0
            }
            set transcript ""
            set transcript_version ""
            set CDSl       ""
            set CDSpercent ""
            set txStart    ""
            set txEnd      ""
            set txL        ""
            set location   ""
            set location2  ""
            set distNearestSS ""
            set nearestSStype ""
            set intersect  "\t"
            set nbExons    ""
            set frameshift ""
        }
        
        # Definition of "locationStart" and "locationEnd" variables
        # Definition of "distNearestSS" and "nearestSStype" variables
        # NearestSStype:
        #   5' = splice donor site (on the right of the exon if strand +; else on the left)
        #   3' = splice acceptor site (on the left of the exon if strand +; else on the right)
        if {$AnnotationMode eq "split"} {
            set nbEx [expr {[llength [split $exonStarts ","]]-1}] ; # Example: "1652370,1657120,1660664,1661968," --> 1652370 1657120 1660664 1661968 {}
            
            set tx_left [lindex [split $exonStarts ","] 0]
            set tx_right [lindex [split $exonEnds ","] end-1]
            
            if {$SVleft<=$tx_left} {         ; # SV begins before tx start (or tx end for strand "-")
                if {$strand eq "+"} {
                    set locationStart "txStart"
                } else {
                    set locationEnd "txEnd"
                }
            }
            
            set i 0
            set previousB "[lindex [split $exonEnds ","] 0]"
            foreach A [split $exonStarts ","] B [split $exonEnds ","] {
                if {$A eq "" || $B eq ""} {continue}
                incr i
                # SV left
                if {$SVleft<$B} {
                    if {$SVleft>$A} {
                        # in an exon
                        set distNearestSSleftA "[expr {$SVleft-$A}]"
                        set distNearestSSleftB "[expr {$B-$SVleft}]"
                        if {$i eq 1} { ;# Only 1 splice site on the first exon
                            set distNearestSSleft $distNearestSSleftB
                            if {$strand eq "+"} {set nearestSStypeLeft "5'"} else {set nearestSStypeLeft "3'"}
                        } elseif {$i eq $nbEx} { ;# Only 1 splice site on the last exon
                            set distNearestSSleft $distNearestSSleftA
                            if {$strand eq "+"} {set nearestSStypeLeft "3'"} else {set nearestSStypeLeft "5'"}
                        } elseif {$distNearestSSleftA < $distNearestSSleftB} {
                            set distNearestSSleft $distNearestSSleftA
                            if {$strand eq "+"} {set nearestSStypeLeft "3'"} else {set nearestSStypeLeft "5'"}
                        } else {
                            set distNearestSSleft $distNearestSSleftB
                            if {$strand eq "+"} {set nearestSStypeLeft "5'"} else {set nearestSStypeLeft "3'"}
                        }
                        if {$strand eq "+"} {
                            set locationStart "exon$i"
                        } else {
                            set locationEnd "exon[expr {$nbEx-$i+1}]" ; # gene on the strand "-"
                        }
                    } elseif {$SVleft>=$previousB} {
                        # in an intron
                        set distNearestSSleftB "[expr {$SVleft-$previousB}]"
                        set distNearestSSleftA "[expr {$A-$SVleft}]"
                        if {$distNearestSSleftB < $distNearestSSleftA} {
                            set distNearestSSleft $distNearestSSleftB
                            if {$strand eq "+"} {set nearestSStypeLeft "5'"} else {set nearestSStypeLeft "3'"}
                        } else {
                            set distNearestSSleft $distNearestSSleftA
                            if {$strand eq "+"} {set nearestSStypeLeft "3'"} else {set nearestSStypeLeft "5'"}
                        }
                        if {$strand eq "+"} {
                            set locationStart "intron[expr {$i-1}]"
                        } else {
                            set locationEnd "intron[expr {$nbEx-$i+1}]"
                        }
                    }
                }
                # SV right
                if {$SVright<$B} {
                    if {$SVright>$A} {
                        # in an exon
                        set distNearestSSrightA "[expr {$SVright-$A}]"
                        set distNearestSSrightB "[expr {$B-$SVright}]"
                        if {$i eq 1} { ;# Only 1 splice site on the first exon
                            set distNearestSSright $distNearestSSrightB
                            if {$strand eq "+"} {set nearestSStypeRight "5'"} else {set nearestSStypeRight "3'"}
                        } elseif {$i eq $nbEx} { ;# Only 1 splice site on the last exon
                            set distNearestSSright $distNearestSSrightA
                            if {$strand eq "+"} {set nearestSStypeRight "3'"} else {set nearestSStypeRight "5'"}
                        } elseif {$distNearestSSrightA < $distNearestSSrightB} {
                            set distNearestSSright $distNearestSSrightA
                            if {$strand eq "+"} {set nearestSStypeRight "3'"} else {set nearestSStypeRight "5'"}
                        } else {
                            set distNearestSSright $distNearestSSrightB
                            if {$strand eq "+"} {set nearestSStypeRight "5'"} else {set nearestSStypeRight "3'"}
                        }
                        if {$strand eq "+"} {
                            set locationEnd "exon$i"
                        } else {
                            set locationStart "exon[expr {$nbEx-$i+1}]"
                        }
                        break
                    } elseif {$SVright>=$previousB} {
                        # in an intron
                        set distNearestSSrightB "[expr {$SVright-$previousB}]"
                        set distNearestSSrightA "[expr {$A-$SVright}]"
                        if {$distNearestSSrightB < $distNearestSSrightA} {
                            set distNearestSSright $distNearestSSrightB
                            if {$strand eq "+"} {set nearestSStypeRight "5'"} else {set nearestSStypeRight "3'"}
                        } else {
                            set distNearestSSright $distNearestSSrightA
                            if {$strand eq "+"} {set nearestSStypeRight "3'"} else {set nearestSStypeRight "5'"}
                        }
                        if {$strand eq "+"} {
                            set locationEnd "intron[expr {$i-1}]"
                        } else {
                            set locationStart "intron[expr {$nbEx-$i+1}]"
                        }
                        break
                    }
                }
                set previousB "$B"
            }
            if {$locationEnd eq "" || $locationStart eq ""} {     ; # SV finishes after tx end
                if {$strand eq "+"} {
                    set locationEnd "txEnd"
                } else {
                    set locationStart "txStart"
                }
            }
            
            set location "${locationStart}-${locationEnd}"
            if {$location ne "txStart-txEnd"} {
                if {$distNearestSSright eq ""} {
                    if {$distNearestSSleft ne ""} {
                        set distNearestSS "$distNearestSSleft"
                        set nearestSStype "$nearestSStypeLeft"
                    }
                } elseif {$distNearestSSleft eq ""} {
                    set distNearestSS "$distNearestSSright"
                    set nearestSStype "$nearestSStypeRight"
                } elseif {$distNearestSSright < $distNearestSSleft} {
                    set distNearestSS "$distNearestSSright"
                    set nearestSStype "$nearestSStypeRight"
                } else {
                    set distNearestSS "$distNearestSSleft"
                    set nearestSStype "$nearestSStypeLeft"
                }
            }
            
            # Definition of "regionStart" and "regionEnd" variables
            # Warning: some genes have CDSstart=CDSend=txEnd (<=> no CDS)
            if {$CDSstart eq $CDSend} {
                set regionLeft "UTR"
                set regionRight "UTR"
            } else {
                # SVleft
                if {$SVleft < $CDSstart} {
                    if {$strand eq "+"} {
                        set regionLeft "5'UTR"
                    } else {
                        set regionLeft "3'UTR"
                    }
                } elseif {$SVleft < $CDSend} {
                    set regionLeft "CDS"
                } else {
                    if {$strand eq "+"} {
                        set regionLeft "3'UTR"
                    } else {
                        set regionLeft "5'UTR"
                    }
                }
                # SVright
                if {$SVright < $CDSstart} {
                    if {$strand eq "+"} {
                        set regionRight "5'UTR"
                    } else {
                        set regionRight "3'UTR"
                    }
                } elseif {$SVright < $CDSend} {
                    set regionRight "CDS"
                } else {
                    if {$strand eq "+"} {
                        set regionRight "3'UTR"
                    } else {
                        set regionRight "5'UTR"
                    }
                }
            }
            if {$strand eq "+"} {
                set regionStart $regionLeft
                set regionEnd   $regionRight
            } else {
                set regionStart $regionRight
                set regionEnd   $regionLeft
            }
            set location2 "$regionStart-$regionEnd"
            if {[regexp "(\[^-\]+)-(\[^-\]+)" $location2 match titi tutu]} {
                if {$titi eq $tutu} {set location2 $titi}
            }
            
            # frameshift update for insertion
            if {$SVtype_norm eq "INS"} {
                if {![regexp "exon" $location2]} {
                    # Insertion outside the CDS
                    set frameshift "NA"
                }
            }
        }
        
        # Definition of "intersectStart" and "intersectEnd" variables
        if {$AnnotationMode eq "split"} {
            if {$SVleft<$tx_left} {set intersectStart "$tx_left"} else {set intersectStart "$SVleft"}
            if {$SVright<$tx_right} {set intersectEnd "$SVright"} else {set intersectEnd "$tx_right"}
            set intersect "$intersectStart\t$intersectEnd"
        }
        
        # Closest genes annotation
        if {$AnnotationMode eq "full"} {
            # In Closest_left and Closest_right features, we only keep the closest gene:
            #   - not overlapped with the SV (<=> not in $geneName)
            #   - located up to 5 Mb to the left or right side of the SV
            set L_geneName [split $geneName ";"] ;# => gene names overlapped with the SV
            set L_closestGenesLeft [closestGenesAnnotation $SVchrom $SVleft "left"]
            set i [expr {[llength $L_closestGenesLeft]-1}]
            set closestGeneText ""
            while {$i >= 0} {
                set gClosest [lindex $L_closestGenesLeft $i]
                if {[lsearch -exact $L_geneName $gClosest] eq -1} {
                    set closestGeneText "$gClosest"
                    break
                } else {
                    incr i -1
                }
            }
            set toAdd ""
            foreach gClosest [closestGenesAnnotation $SVchrom $SVright "right"] {
                if {[lsearch -exact $L_geneName $gClosest] eq -1} {
                    set toAdd "$gClosest"
                    break
                }
            }
            append closestGeneText "\t$toAdd"
        } else {set closestGeneText "\t"}
        
        # Regulatory elements annotation (only for the full lines)
        # Human or mouse
        set reText ""
        if {$AnnotationMode eq "full"} {
            if {[info exists g_re($SVchrom\t$SVleft\t$SVright)]} {
                set reText $g_re($SVchrom\t$SVleft\t$SVright)
            }
        }
        
        # Annotations with pathogenic genes or genomic regions (FtIncludedInSV)
        if {$g_AnnotSV(organism) eq "Human"} {
            if {$AnnotationMode eq "split"} {
                set pathogenicText "[pathogenicSVannotation $SVchrom $intersectStart $intersectEnd]"
            } else {
                set pathogenicText "[pathogenicSVannotation $SVchrom $SVleft $SVright]"
            }
        }
        
        # Annotations with "partially overlapped" (po) pathogenic genes or genomic regions
        if {$g_AnnotSV(organism) eq "Human"} {
            if {$AnnotationMode eq "split"} {
                # nothing for the split lines
                set poPathogenicText "[poPathogenicSVannotation "NULL" "NULL" "NULL"]"
            } else {
                set poPathogenicText "[poPathogenicSVannotation $SVchrom $SVleft $SVright]"
            }
        }
        
        # Annotations with pathogenic snv/indel (FtIncludedInSV)
        if {$g_AnnotSV(organism) eq "Human"} {
            if {$AnnotationMode eq "split"} {
                set pathoSNVindelText "[pathoSNVindelAnnotation $SVchrom $intersectStart $intersectEnd]"
            } else {
                set pathoSNVindelText "[pathoSNVindelAnnotation $SVchrom $SVleft $SVright]"
            }
        }
        
        # Annotations with benign genes or genomic regions (SVincludedInFt)
        if {$g_AnnotSV(organism) eq "Human"} {
            if {$AnnotationMode eq "split"} {
                set benignText "[benignSVannotation $SVchrom $intersectStart $intersectEnd]"
            } else {
                set benignText "[benignSVannotation $SVchrom $SVleft $SVright]"
            }
        }
        
        # Annotations with "partially overlapping" (po) benign genomic regions
        if {$g_AnnotSV(organism) eq "Human"} {
            if {$AnnotationMode eq "split"} {
                # nothing for the split lines
                set poBenignText "[poBenignSVannotation "NULL" "NULL" "NULL" "NULL"]"
            } else {
                set poBenignText "[poBenignSVannotation $SVchrom $SVleft $SVright $geneName]"
            }
        }
        
        # Annotations with cytoband (AnyOverlap)
        if {$g_AnnotSV(cytoband)} {
            set cytobandText ""
            set cytobandDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/AnyOverlap/CytoBand/$g_AnnotSV(genomeBuild)/"
            set cytobandBEDfile [glob -nocomplain $cytobandDir/cytoBand_$g_AnnotSV(genomeBuild).formatted.sorted.bed]
            if {[file exists $cytobandBEDfile]} {
                set use3points "0"
                if {$AnnotationMode eq "split"} {
                    set L_cytobandText "[userBEDannotation $cytobandBEDfile $SVchrom $intersectStart $intersectEnd $use3points]"
                } else {
                    set L_cytobandText "[userBEDannotation $cytobandBEDfile $SVchrom $SVleft $SVright $use3points]"
                }
                set L_cytobandText [split $L_cytobandText ";"]
                set cytobandText [lindex $L_cytobandText 0]
                if {[llength $L_cytobandText] > 1} {
                    append cytobandText "-[lindex $L_cytobandText end]"
                }
            }
        }
        
        # User SVincludedInFt BED annotations.
        set L_SVincludedInFtText {}
        foreach formattedUserBEDfile [glob -nocomplain $usersDir/SVincludedInFt/*.formatted.sorted.bed] {
            if {$AnnotationMode eq "split"} {
                lappend L_SVincludedInFtText "[userBEDannotation $formattedUserBEDfile $SVchrom $intersectStart $intersectEnd]"
            } else {
                lappend L_SVincludedInFtText "[userBEDannotation $formattedUserBEDfile $SVchrom $SVleft $SVright]"
            }
        }
        set SVincludedInFTtext [join $L_SVincludedInFtText "\t"]
        
        # User FtIncludedInSV BED annotations.
        set L_FtIncludedInSVtext {}
        foreach formattedUserBEDfile [glob -nocomplain $usersDir/FtIncludedInSV/*.formatted.sorted.bed] {
            # Very slow with COSMIC data, to check
            # puts "$formattedUserBEDfile ([clock format [clock seconds] -format "%H:%M"])"
            if {$AnnotationMode eq "split"} {
                lappend L_FtIncludedInSVtext "[userBEDannotation $formattedUserBEDfile $SVchrom $intersectStart $intersectEnd]"
            } else {
                lappend L_FtIncludedInSVtext "[userBEDannotation $formattedUserBEDfile $SVchrom $SVleft $SVright]"
            }
        }
        set FtIncludedInSVtext [join $L_FtIncludedInSVtext "\t"]
        
        # User AnyOverlap BED annotations.
        set L_AnyOverlapText {}
        foreach formattedUserBEDfile [glob -nocomplain $usersDir/AnyOverlap/*.formatted.sorted.bed] {
            if {$AnnotationMode eq "split"} {
                lappend L_AnyOverlapText "[userBEDannotation $formattedUserBEDfile $SVchrom $intersectStart $intersectEnd]"
            } else {
                lappend L_AnyOverlapText "[userBEDannotation $formattedUserBEDfile $SVchrom $SVleft $SVright]"
            }
        }
        set AnyOverlapText [join $L_AnyOverlapText "\t"]
        
        # User BNDproximity BED annotations.
        set L_BNDproximityText {}
        foreach formattedUserBEDfile [glob -nocomplain $usersDir/BNDproximity/*.formatted.sorted.bed] {
            if {$AnnotationMode eq "split"} {
                lappend L_BNDproximityText "[userBEDannotation $formattedUserBEDfile $SVchrom $intersectStart $intersectEnd]"
            } else {
                lappend L_BNDproximityText "[userBEDannotation $formattedUserBEDfile $SVchrom $SVleft $SVright]"
            }
        }
        set BNDproximityText [join $L_BNDproximityText "\t"]
        
        # Gene-based annotations.
        if {$g_AnnotSV(geneBasedAnn)} {
            #   -> Number of columns from each Gene-based file
            if {[info exists g_AnnotSV(extann)] && $g_AnnotSV(extann) ne ""} {
                foreach F [ExternalAnnotations L_Files] {
                    set nbColumns($F) [expr {[llength [split [ExternalAnnotations $F Header] "\t"]]-1}]
                }
            }
            #   -> Annotations
            set L_geneBasedText {}
            if {$AnnotationMode eq "split"} {
                ######### split lines ###################################
                if {[info exists g_AnnotSV(extann)] && $g_AnnotSV(extann) != ""} {
                    foreach F [ExternalAnnotations L_Files] {
                        set AnnotFound "[ExternalAnnotations $F $geneName]"
                        if {$AnnotFound eq ""} {
                            lappend L_geneBasedText {*}"[lrepeat $nbColumns($F) ""]"
                        } else {
                            if {[set g_AnnotSV(metrics)] eq "fr"} {
                                # Remove the exponential nomenclature: [expr {9.9443e-01}] = 0.99443
                                # Change metrics from "." to ","
                                foreach valueByColumn [split $AnnotFound "\t"] {
                                    # Only for the values like "0.5", "-25.3", "9.3e-01", "9.3e+01"
                                    if {[regexp "^(-)?\[0-9\]+\\.\[0-9\]+(e\[-+\]\[0-9\]+)?$" $valueByColumn]} {
                                        regsub -all {\.} [expr {$valueByColumn}] "," valueByColumn
                                    }
                                    lappend L_geneBasedText "$valueByColumn"
                                }
                            } else {
                                lappend L_geneBasedText {*}[split $AnnotFound "\t"]
                            }
                        }
                    }
                }
            } else {
                ######### full lines ###################################
                if {[info exists g_AnnotSV(extann)] && $g_AnnotSV(extann) != ""} {
                    if {$geneName eq ""} {
                        foreach F [ExternalAnnotations L_Files] {
                            lappend L_geneBasedText {*}"[lrepeat $nbColumns($F) ""]"
                        }
                    } else {
                        set allGenesFromFullLine [split $geneName ";"]
                        foreach F [ExternalAnnotations L_Files] {
                            
                            # First, we search for the annotation of each gene that we merge with a ";"
                            set L_AnnotFound {}
                            foreach g $allGenesFromFullLine {
                                set AnnotFound "[ExternalAnnotations $F $g]"
                                if {$AnnotFound eq ""} {
                                    set AnnotFound "[join [lrepeat $nbColumns($F) ""] "\t"]"
                                }
                                lappend L_AnnotFound "$AnnotFound"
                            }
                            set tutu [MergeAnnotation $L_AnnotFound $nbColumns($F)]
                            # Second (for full lines), we doesn't keep the annotation of all genes (value is set to empty),
                            # except:
                            # -  for "decimal" scores and percentages where we keep the max value
                            #    (in order not to have value such "1.5/////-0.2////")
                            # - for OMIM number where we keep all the numbers
                            # - For LOEUF value where we keep the min value
                            set L_newGeneBasedText ""
                            if {$tutu eq ""} {lappend L_geneBasedText ""} ; #if {$tutu eq ""} => doesn't enter in the foreach
                            foreach valueByColumn [split $tutu "\t"] {
                                if {$valueByColumn ne ""} {
                                    set isAScore 1
                                    set max -1000
                                    foreach valueByGene [split $valueByColumn ";"] {
                                        if {[regexp "ClinGenAnnotations.tsv" $F]} {
                                            set max ""
                                            # For ClinGen file (HI + TS), the values are ordered as follow:
                                            # 3 > 2 > 1 > 0 > 40 > 30 > Not yet evaluated
                                            # We only report 3, 2 or 1 in a full line
                                            if {[lsearch -exact {3 2 1} $valueByGene] ne -1} {
                                                if {$valueByGene eq 3} {set max 3; break}
                                                if {$valueByGene eq 2} {
                                                    set max 2
                                                } elseif {$max ne 2} {
                                                    set max 1
                                                }
                                            }
                                        } elseif {[regexp "OMIM-1-annotations.tsv" $F]} {
                                            if {$valueByGene ne ""} {if {$max eq "-1000"} {set max "$valueByGene"} else {append max ";$valueByGene"}}
                                        } elseif {[regexp "morbid" $F]} {
                                            if {[regexp "yes" $valueByGene]} {set max "yes"}
                                        } elseif {[regexp "gnomAD.LOEUF.pLI.annotations.tsv" $F] && [regexp "^\[0-9\]$" $valueByGene]} {
                                            # Only for the loeuf values: 0, 1, 2, 3, 4, 5, 6, 7, 8 or 9
                                            # -	Low LOEUF scores (e.g. 0) indicate strong selection against predicted loss-of-function (pLoF) variation in a given gene
                                            # - High LOEUF scores (e.g. 9) suggest a relatively higher tolerance to inactivation
                                            if {$valueByGene ne "" && ($max eq "-1000" || $valueByGene < $max)} {set max $valueByGene}
                                        } else {
                                            # Only for the values like "0.5", "-25.3", "9.3e-01", "9.3e+01"
                                            if {[regexp "^(-)?\[0-9\]+\\.\[0-9\]+(e\[-+\]\[0-9\]+)?$" $valueByGene]} {
                                                if {$valueByGene > $max} {set max $valueByGene}
                                            } else {
                                                set isAScore 0
                                                #if {$valueByGene ne ""} {break}
                                            }
                                        }
                                    }
                                    if {$isAScore} {
                                        # Remove the exponential nomenclature: [expr {9.9443e-01}] = 0.99443
                                        # Change metrics from "." to ","
                                        if {[set g_AnnotSV(metrics)] eq "fr"} {
                                            regsub -all {\.} [expr {$max}] "," max
                                        }
                                        lappend L_newGeneBasedText $max
                                    } else {
                                        lappend L_newGeneBasedText ""
                                        
                                    }
                                } else {
                                    lappend L_newGeneBasedText ""
                                }
                            }
                            lappend L_geneBasedText {*}$L_newGeneBasedText
                        }
                    }
                }
            }
            set geneBasedText ""
            foreach i $g_AnnotSV(geneBasedAnn_i) {
                lappend geneBasedText [lindex $L_geneBasedText $i]
            }
            set geneBasedText [join $geneBasedText "\t"]
        }
        
        # GC content annotation
        if {$g_AnnotSV(gcContentAnn)} {
            if {$AnnotationMode eq "full"} {
                set gcContentText "[GCcontentAnnotation $SVchrom $SVleft]"
                append gcContentText "\t[GCcontentAnnotation $SVchrom $SVright]"
            } else {set gcContentText "\t"}
        }
        
        # Repeat annotation
        if {$g_AnnotSV(repeatAnn)} {
            if {$AnnotationMode eq "full"} {
                set repeatText "[RepeatAnnotation $SVchrom $SVleft]"
                append repeatText "\t[RepeatAnnotation $SVchrom $SVright]"
            } else {set repeatText "\t\t\t"}
        }
        
        # Gap annotation
        if {$g_AnnotSV(gapAnn)} {
            if {$AnnotationMode eq "full"} {
                set gapText "[GapAnnotation $SVchrom $SVleft]"
                append gapText "\t[GapAnnotation $SVchrom $SVright]"
            } else {set gapText "\t"}
        }
        
        # Segmental duplication annotation
        if {$g_AnnotSV(segdupAnn)} {
            if {$AnnotationMode eq "full"} {
                set segdupText "[SegDupAnnotation $SVchrom $SVleft]"
                append segdupText "\t[SegDupAnnotation $SVchrom $SVright]"
            } else {set segdupText "\t"}
        }
        
        # ENCODE blacklist annotation
        if {$g_AnnotSV(ENCODEblacklistAnn)} {
            if {$AnnotationMode eq "full"} {
                set ENCODEblacklistText "[ENCODEblacklistAnnotation $SVchrom $SVleft]"
                append ENCODEblacklistText "\t[ENCODEblacklistAnnotation $SVchrom $SVright]"
            } else {set ENCODEblacklistText "\t\t\t"}
        }
        
        # TAD annotation
        if {$g_AnnotSV(tadAnn)} {
            if {$AnnotationMode eq "split"} {
                set tadText "[TADannotation $SVchrom $intersectStart $intersectEnd $g_AnnotSV(tadAnn_i)]"
            } else {
                set tadText "[TADannotation $SVchrom $SVleft $SVright $g_AnnotSV(tadAnn_i)]"
            }
        }
        
        # Calculate among the SNV/indel (only for deletion) the:
        # - #hom(sample), #htz(sample), #htz/allHom(sample), #htz/total(sample) variables for each sample
        # - #total(cohort) variable
        set HomHtz ""
        if {$g_AnnotSV(snvIndelFiles) ne ""} {
            if {$AnnotationMode eq "split"} {
                set HomHtz "[VCFannotation $SVchrom $intersectStart $intersectEnd $SVtype]"
            } else {
                set HomHtz "[VCFannotation $SVchrom $SVleft $SVright $SVtype]"
            }
        }
        
        # Calculate the compound-htz variable
        set compound ""
        if {$g_AnnotSV(candidateSnvIndelFiles) ne ""} {
            if {$AnnotationMode eq "split"} {
                set compound [filteredVCFannotation $SVchrom $txStart $txEnd $Ls $headerOutput]
            } else {
                set compound [filteredVCFannotation "FULL" "" "" "" ""]
            }
        }
        
        # "bestAnn" annotation order:
        # chrom txStart txEnd name2 name cdsStart cdsEnd exonStarts exonEnds
        #
        # headerOutput "\tAnnotation_mode\tGene_name\tGene_count\tTx\tTx_version\tTx_start\tTx_end\tOverlapped_tx_length\tOverlapped_CDS_length\tOverlapped_CDS_percent\tFrameshift\tExon_count\tLocation\tLocation2\tDist_nearest_SS\tNearest_SS_type\tIntersect_start\tIntersect_end\tRE_gene"
        
        # Insertion of the SV length in the fourth column:
        set SVchrom [lindex $Ls 0]
        set SVstart_BED [lindex $Ls 1]
        set SVstart_VCF [expr {$SVstart_BED+1}]
        set SVend [lindex $Ls 2]
        regsub "chr" [lindex $Ls $i_ref] "" ref
        regsub "chr" [lindex $Ls $i_alt] "" alt
        
        # Creation of the AnnotSV ID (chrom_start_end_SVtype_i)
        # (SV_type should not have any space or special car)
        regsub -all "\[ .():;\]" $SVtype "_" SVtypeTmp
        set AnnotSV_ID [settingOfTheAnnotSVID "${SVchrom}_${SVstart_VCF}_${SVend}_$SVtypeTmp" "$ref" "$alt"]
        
        # FullAndSplitBedFile: Coordinates 0-based!!!
        # Report of the SV length
        # set SVlength [expr {$SVend-$SVstart_BED}] ; # No! Wrong for an insertion, a BND or a translocation
        if {[info exists g_SVLEN($AnnotSV_ID)]} {
            set SVlength $g_SVLEN($AnnotSV_ID)
        } else {
            set SVtype_norm [normalizeSVtype $SVtype]
            if {![info exist VCFheader]} {
                # SVinputFile = BED
                if {[regexp "DEL" $SVtype_norm]} { ;# DEL
                    set SVlength [expr {$SVstart_BED-$SVend}]
                } elseif {[regexp "DUP|INV" $SVtype_norm]} { ;# DUP or INV
                    set SVlength [expr {$SVend-$SVstart_BED}]
                } elseif {[regexp "TRA" $SVtype_norm]} { ;# TRA
                    set SVlength 0
                    set g_SVLEN($AnnotSV_ID) 0
                } else {set SVlength ""}
            } else {
                # SVinputFile = VCF
                if {[regexp "DEL" $SVtype_norm]} { ;# DEL
                    set SVlength [expr {$SVstart_BED-$SVend}]
                } elseif {[regexp "DUP|INV" $SVtype_norm]} { ;# DUP or INV
                    set SVlength [expr {$SVend-$SVstart_BED}]
                } elseif {[regexp "TRA" $SVtype_norm]} { ;# TRA
                    set SVlength 0
                    set g_SVLEN($AnnotSV_ID) 0
                } else {set SVlength ""}
            }
        }
        
        ####### "Phenogenius annotation"
        if {$g_AnnotSV(PhenoGeniusCli)} {
            if {$AnnotationMode eq "split"} {
                set phenogeniusText [PhenoGeniusCliAnnotation $geneName "all"]
            } else {
                set bestSpecificity ""
                foreach g [split $geneName ";"] {
                    set specificity [PhenoGeniusCliAnnotation $g "specificity"]
                    # {"A" < "B"} => True
                    if {$specificity eq ""} {continue}
                    if {$bestSpecificity eq ""} {set bestSpecificity $specificity; continue}
                    if {$specificity < $bestSpecificity} {set bestSpecificity $specificity}
                }
                set phenogeniusText "\t\t$bestSpecificity"
            }
        }
        ####### "Exomiser annotation"
        if {$g_AnnotSV(hpo) ne ""} {
            if {$AnnotationMode eq "split"} {
                set exomiserText [ExomiserAnnotation $geneName "all"]
            } else {
                set bestScore "-1.0"
                foreach g [split $geneName ";"] {
                    set score [ExomiserAnnotation $g "score"]
                    if {$score > $bestScore} {set bestScore $score}
                }
                set exomiserText "$bestScore\t\t\t"
            }
        }
        
        
        #################################################################################
        ############# creation of the "L_TextToWrite(AnnotSV_ID)" variable ##############
        #################################################################################
        
        set TextToWrite ""
        
        ####### "Basic SV annotations"
        if {$g_AnnotSV(SVinputInfo)} {
            set toadd [lrange $Ls 0 [expr {$theBEDlength-1}]]
            set toadd [linsert $toadd 3 $SVlength]
            append TextToWrite "$AnnotSV_ID\t[join $toadd "\t"]"
        } else {
            append TextToWrite "$AnnotSV_ID\t[join [lrange $Ls 0 2] "\t"]\t$SVlength"
            if {$g_AnnotSV(svtBEDcol) ne -1} { ; # SV_type is required for the ranking
                append TextToWrite "\t$SVtype"
                if {$g_AnnotSV(samplesidBEDcol) ne -1} {
                    append TextToWrite "\t$Samplesid"
                }
            } elseif {$g_AnnotSV(samplesidBEDcol) ne -1} {
                append TextToWrite "\t$Samplesid"
            }
        }
        append TextToWrite "\t$AnnotationMode"
        
        ####### "Cytoband annotations"
        if {$g_AnnotSV(cytoband)} {
            append TextToWrite "\t$cytobandText"
        }
        
        ####### "Basic gene annotations"
        append TextToWrite "\t$geneName\t$closestGeneText\t$NbGenes\t$transcript\t$transcript_version\t$txStart\t$txEnd\t$txL\t$CDSl\t$CDSpercent\t$frameshift\t$nbExons\t$location\t$location2\t$distNearestSS\t$nearestSStype\t$intersect"
        
        ####### "Regulatory elements annotations"
        append TextToWrite "\t$reText"
        
        #######  "Annotations with pathogenic genes or genomic regions (FtIncludedInSV)"
        if {$g_AnnotSV(organism) eq "Human"} {
            append TextToWrite "\t$pathogenicText"
        }
        
        #######  "Annotations with "partially overlapped" pathogenic genes or genomic regions"
        if {$g_AnnotSV(organism) eq "Human"} {
            append TextToWrite "\t$poPathogenicText"
        }
        
        #######  "Annotations with pathogenic snv/indel (FtIncludedInSV)"
        if {$g_AnnotSV(organism) eq "Human"} {
            append TextToWrite "\t$pathoSNVindelText"
        }
        
        #######  "Annotations with benign genes or genomic regions (SVincludedInFt)"
        if {$g_AnnotSV(organism) eq "Human"} {
            append TextToWrite "\t$benignText"
        }
        
        #######  "Annotations with partially overlapping benign genomic regions"
        if {$g_AnnotSV(organism) eq "Human"} {
            append TextToWrite "\t$poBenignText"
        }
        
        #######  "Custom SVincludedInFt"
        if {[glob -nocomplain $usersDir/SVincludedInFt/*.formatted.sorted.bed] ne ""} { ; # Don't put {$SVincludedInFTtext ne ""}: the user BED could have only 1 annotation column, and so $UserText can be equel to "" (without "\t")
            append TextToWrite "\t$SVincludedInFTtext"
        }
        
        ####### Custom "FtIncludedInSV"
        if {$g_AnnotSV(tadAnn)} {
            append TextToWrite "\t$tadText"
        }
        if {$HomHtz ne ""} {
            append TextToWrite "\t$HomHtz"
        }
        if {$g_AnnotSV(candidateSnvIndelFiles) ne ""} {
            append TextToWrite "\t$compound"
        }
        if {[glob -nocomplain $usersDir/FtIncludedInSV/*.formatted.sorted.bed] ne ""} { ; # Don't put {$FtIncludedInSVtext ne ""}: the user BED could have only 1 annotation column, and so $UserText can be equal to "" (without "\t")
            append TextToWrite "\t$FtIncludedInSVtext"
        }
        
        #######  "Custom AnyOverlap"
        if {[glob -nocomplain $usersDir/AnyOverlap/*.formatted.sorted.bed] ne ""} { ; # Don't put {$AnyOverlaptext ne ""}: the user BED could have only 1 annotation column, and so $UserText can be equal to "" (without "\t")
            append TextToWrite "\t$AnyOverlapText"
        }
        
        #######  "Custom BNDproximity"
        if {[glob -nocomplain $usersDir/BNDproximity/*.formatted.sorted.bed] ne ""} { ; # Don't put {$BNDproximitytext ne ""}: the user BED could have only 1 annotation column, and so $UserText can be equal to "" (without "\t")
            append TextToWrite "\t$BNDproximityText"
        }
        
        ####### "Breakpoints annotations"
        if {$g_AnnotSV(gcContentAnn)} {
            append TextToWrite "\t$gcContentText"
        }
        if {$g_AnnotSV(repeatAnn)} {
            append TextToWrite "\t$repeatText"
        }
        if {$g_AnnotSV(gapAnn)} {
            append TextToWrite "\t$gapText"
        }
        if {$g_AnnotSV(segdupAnn)} {
            append TextToWrite "\t$segdupText"
        }
        if {$g_AnnotSV(ENCODEblacklistAnn)} {
            append TextToWrite "\t$ENCODEblacklistText"
        }
        ####### "Gene-based annotations"
        if {$g_AnnotSV(geneBasedAnn)} {
            append TextToWrite "\t$geneBasedText"
        }
        ####### "PhenoGenius annotation"
        if {$g_AnnotSV(PhenoGeniusCli)} {
            append TextToWrite "\t$phenogeniusText"
        }
        ####### "Exomiser annotation"
        if {$g_AnnotSV(hpo) ne ""} {
            append TextToWrite "\t$exomiserText"
        }
        
        ####### "Memorize the AnnotSV_ID to then order the output lines"
        ## Done only the first time an AnnotSV_ID is met
        ## (not for the split lines)
        ## WARNING: AnnotSV_ID redundancy is not authorized between full lines
        ##			Each SV is assumed to only have one single line of 'full' annotation (no ID redundancy authorized in VCF)
        if {![info exists L_TextToWrite($AnnotSV_ID)]} {
            lappend L_AnnotSV_ID $AnnotSV_ID
            if {$g_AnnotSV(hpo) ne ""} {
                set bestExomiserScore($AnnotSV_ID) "[lindex [split $exomiserText "\t"] 0]"
            }
        }
        
        ####### "Ranking annotations"
        # Determine the SV ranking score in several steps:
        # 1 - score computed with the full line
        # 2 - score recomputed with the split lines
        if {$g_AnnotSV(ranking)} {
            set SVtype [normalizeSVtype $SVtype] ;# DEL or DUP or INS or INV or ""
            if {$SVtype eq "DEL"} {
                SVrankingLoss "$TextToWrite" ;# Creation of $g_rankingScore($AnnotSV_ID) and $g_rankingExplanations($AnnotSV_ID)
            } elseif {$SVtype eq "DUP"} {
                SVrankingGain "$TextToWrite" ;# Creation of $g_rankingScore($AnnotSV_ID) and $g_rankingExplanations($AnnotSV_ID)
            } elseif {$SVtype eq "INS"} {
                SVrankingINS "$TextToWrite" ;# Creation of $g_rankingScore($AnnotSV_ID) and $g_rankingExplanations($AnnotSV_ID)
            } elseif {$SVtype eq "INV"} {
                SVrankingINV "$TextToWrite" ;# Creation of $g_rankingScore($AnnotSV_ID) and $g_rankingExplanations($AnnotSV_ID)
            } else {
                set g_rankingScore($AnnotSV_ID) ""
                set g_rankingExplanations($AnnotSV_ID) ""
            }
        }
        
        ####### Define $L_TextToWrite($AnnotSV_ID)
        lappend L_TextToWrite($AnnotSV_ID) "$TextToWrite"
    }
    close $f
    
    
    ## Finalize the ranking
    #######################
    if {$g_AnnotSV(ranking)} {
        # Some input BED file can have the same SV described on several lines
        foreach AnnotSV_ID [lsort -unique $L_AnnotSV_ID] {
            set SVtype [lindex [split $AnnotSV_ID "_"] end-1]
            set SVtype [normalizeSVtype $SVtype]
            if {$SVtype eq "DEL"} {
                achieveSVrankingLoss $AnnotSV_ID
            } elseif {$SVtype eq "DUP"} {
                achieveSVrankingGain $AnnotSV_ID
            }
        }
    }
    
    
    ################################################
    ################### Writing ####################
    ################################################
    puts "\n...writing of $outputFile ([clock format [clock seconds] -format "%B %d %Y - %H:%M"])"
    set L_lineCompleted ""
    
    # If the ranking is provided, the SV in the output are classified:
    # >>  from the higher to the lower ranking score
    # >>  or (if equal), from the higher to the lower exomiser score
    # >>  or (if equal), in the sorted order of the BED
    if {$g_AnnotSV(ranking)} {
        # Before:            L_AnnotSV_ID is a list of {AnnotSV_ID}
        # After the foreach: L_AnnotSV_ID is a list of {AnnotSV_ID rankingScore exomiserScore}
        foreach AnnotSV_ID $L_AnnotSV_ID {
            if {![info exists bestExomiserScore($AnnotSV_ID)]} {set bestExomiserScore($AnnotSV_ID) "-1"}
            if {$g_rankingScore($AnnotSV_ID) eq ""} {set score "-99"} else {set score $g_rankingScore($AnnotSV_ID)}
            lappend L_AnnotSV_ID_completed "$AnnotSV_ID $score $bestExomiserScore($AnnotSV_ID)"
        }
        set L_AnnotSV_ID [lsort -command DescendingSortOnElement1 [lsort -command DescendingSortOnElement2 $L_AnnotSV_ID_completed]]
    }
    set i_Annotation_mode [lsearch -exact [split $headerOutput "\t"] "Annotation_mode"]
    set i_genename        [lsearch -exact [split $headerOutput "\t"] "Gene_name"]
    set i 0
    
    foreach AnnotSV_ID $L_AnnotSV_ID {
        set AnnotSV_ID [lindex $AnnotSV_ID 0]
        
        foreach fullOrSplitLine $L_TextToWrite($AnnotSV_ID) {
            set AnnMo [lindex [split $fullOrSplitLine "\t"] $i_Annotation_mode]
            set geneName [lindex [split $fullOrSplitLine "\t"] $i_genename]
            set lineCompleted ""
            if {$AnnMo eq "full"} {
                # Note: the ranking is available only for the full lines
                append lineCompleted "$fullOrSplitLine"
                
                if {$g_AnnotSV(organism) eq "Human"} {
                    if {![info exists g_rankingScore($AnnotSV_ID)]} {set g_rankingScore($AnnotSV_ID) ""}
                    if {$g_rankingScore($AnnotSV_ID) ne ""} {
                        set g_rankingScore($AnnotSV_ID) [expr {double(round(100*$g_rankingScore($AnnotSV_ID)))/100}] ;# e.g.: expr 1+0+0.9+0.3 = 2.1999999999999997 => becomes 2.2 with this line
                    }
                    # Change metrics from "." to ","
                    if {[set g_AnnotSV(metrics)] eq "fr"} {
                        regsub -all {\.} $g_rankingScore($AnnotSV_ID) "," rankScoreFr
                        append lineCompleted "\t$rankScoreFr" ;#rankingScore
                    } else {
                        append lineCompleted "\t$g_rankingScore($AnnotSV_ID)" ;#rankingScore
                    }
                    if {![info exists g_rankingExplanations($AnnotSV_ID)]} {
                        set g_rankingExplanations($AnnotSV_ID) ""
                    } elseif {[set g_AnnotSV(metrics)] eq "fr"} {
                        regsub -all {([0-9])\.([0-9])} $g_rankingExplanations($AnnotSV_ID) "\\1,\\2" g_rankingExplanations($AnnotSV_ID)
                    }
                    append lineCompleted "\t$g_rankingExplanations($AnnotSV_ID)" ;#rankingExplanations
                    if {$g_rankingScore($AnnotSV_ID) eq ""} {
                        set class "NA"
                    } elseif {$g_rankingScore($AnnotSV_ID) >= "0.99"} {
                        set class 5
                    } elseif {$g_rankingScore($AnnotSV_ID) >= "0.9"} {
                        set class 4
                    } elseif {$g_rankingScore($AnnotSV_ID) >= "-0.89"} {
                        set class 3
                    } elseif {$g_rankingScore($AnnotSV_ID) >= "-0.98"} {
                        set class 2
                    } else {
                        set class 1
                    }
                    append lineCompleted "\t$class"	;#ACMGclass
                    set g_ACMGclass($AnnotSV_ID,full) "full=$class"
                    
                    # To select the SV of a user-defined specific class (from 1 to 5)
                    # default : $g_AnnotSV(rankFiltering) == {1 2 3 4 5 NA}
                    if {[lsearch -exact $g_AnnotSV(rankFiltering) $class] eq -1} {
                        continue
                    }
                }
                
                # For the use of the -annotationMode option: keep only the corresponding lines (full or split or both)
                if {$g_AnnotSV(annotationMode) eq "full" && $AnnMo eq "split"} {continue}
                if {$g_AnnotSV(annotationMode) eq "split" && $AnnMo eq "full"} {continue}
                
            } else {
                if {$g_AnnotSV(organism) eq "Human"} {
                    # To select the SV of a user-defined specific class (from 1 to 5)
                    regsub "full=" $g_ACMGclass($AnnotSV_ID,full) "" class
                    if {[lsearch -exact $g_AnnotSV(rankFiltering) $class] eq -1} {
                        continue
                    }
                }
                
                # For the use of the -annotationMode option: keep only the corresponding lines (full or split or both)
                if {$g_AnnotSV(annotationMode) eq "full" && $AnnMo eq "split"} {continue}
                if {$g_AnnotSV(annotationMode) eq "split" && $AnnMo eq "full"} {continue}
                
                # Ranking not available for the split lines
                append lineCompleted "$fullOrSplitLine"
                if {$g_AnnotSV(organism) eq "Human"} {
                    append lineCompleted "\t"  ;#rankingScore
                    append lineCompleted "\t" ;#rankingExplanations
                    append lineCompleted "\t$g_ACMGclass($AnnotSV_ID,full)";#ACMGclass
                }
            }
            
            # To select only the SV annotations overlapping a gene from the "candidateGenesFile"
            if {$g_AnnotSV(candidateGenesFiltering)} {
                if {$geneName eq ""} {
                    # No gene overlapped
                    continue
                }
                set doNotDisplay 1
                foreach g [split $geneName ";"] {
                    if {[isCandidate $g]} {
                        set doNotDisplay 0
                    }
                }
                if {$doNotDisplay} {continue}
            }
            
            lappend L_lineCompleted [switchAllCoordinatesFromBEDtoVCFinLine "$lineCompleted"]
            
            # To avoid a segmentation fault
            incr i
            if {$i > 10000} {
                WriteTextInFile [join $L_lineCompleted "\n"] "$outputFile"
                set L_lineCompleted {}
                set i 0
            }
        }
    }
    
    
    WriteTextInFile [join $L_lineCompleted "\n"] "$outputFile"
    
    
    
    ##############################################################
    ################### Delete temporary file ####################
    ##############################################################
    file delete -force $FullAndSplitBedFile
    file delete -force $g_AnnotSV(bedFile) ; # => ".formatted.bed" tmp file
    file delete -force $g_AnnotSV(fullAndSplitBedFile)
    regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".breakpoints.bed" tmpBreakpointsFile
    file delete -force $tmpBreakpointsFile
    foreach tmpBedFile [glob -nocomplain $g_AnnotSV(outputDir)/*_AnnotSV_inputSVfile.bed] {
        file delete -force $tmpBedFile ; # => a bedfile is present only if "-SVinputFile" is a VCF
    }
    if {[info exists headerFileToRemove]} {
        regsub -nocase "(.formatted)?(.sorted)?.bed$" $g_AnnotSV(bedFile) ".header.tsv" BEDinputHeaderFile
        file delete -force $BEDinputHeaderFile
    }
    if {[info exist g_AnnotSV(NAbedFile)]} {
        file delete -force $g_AnnotSV(NAbedFile)
    }
    set benignDir "$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$g_AnnotSV(genomeBuild)"
    foreach svtype {"Gain" "Loss"} {
        set benignBEDfile [glob -nocomplain "$benignDir/benign_${svtype}_SV_$g_AnnotSV(genomeBuild).sorted.bed"]
        regsub -nocase "(.formatted)?.bed$" $g_AnnotSV(bedFile) ".intersect.po_benign-$svtype" tmpFile
        set tmpFile "$g_AnnotSV(outputDir)/[file tail $tmpFile]"
        file delete -force $tmpFile
    }
    
    ################################################
    ################### Display ####################
    ################################################
    puts "\n...output columns annotation ([clock format [clock seconds] -format "%B %d %Y - %H:%M"]):"
    regsub -all "\t" $headerOutput ";" t
    puts "\t$t\n"
    
    
    ################################################
    ################# VCF output ###################
    ################################################
    if {$g_AnnotSV(vcf)} {
        runVariantconvert $outputFile
    }
    
    return
}



================================================
FILE: share/tcl/AnnotSV/Scripts/lift_Over_a_BED_file.tcl
================================================
#!/usr/bin/env tclsh


##########################################################################################################
# When performing a liftover on a BED file with more than 3 columns (with annotation columns), it may fail
# if some annotation values are empty.
# This script allows:
# - performing a liftover on the first three columns (chrom, start, end)
# - keeping associated annotation columns (even if empty)
# - adding the source of the chain file (e.g., "b38-GCA_009914755.4.over.chain" => source = "b38")
#   in front of annotations that represent genomic positions (e.g. 3:12345-45678 => b38_3:12345-45678)
##########################################################################################################

proc ContentFromFile {{Fichier ""}} {
    if {[string equal $Fichier ""]} {return ""}
    set f     [open $Fichier r]
    set Texte [read -nonewline $f]
    close $f
    return $Texte
}

proc LinesFromFile {{Fichier ""}} {
    return [split [ContentFromFile $Fichier] "\n"]
}

proc WriteTextInFile {texte fichier} {
    set    fifi [open $fichier a]
    puts  $fifi $texte
    close $fifi
    return 1
}


# Inputs
set BEDfileToLift [lindex $argv 0]
set outputFile [lindex $argv 1]
file delete -force $outputFile
set chainFile [lindex $argv 2]
set liftoverTool [lindex $argv 3]
if {$liftoverTool eq ""} {set liftoverTool "liftOver"}

if {[llength $argv] < 3} {
    puts "USAGE:\n$argv0 BEDfileToLift outputFile chainFile {liftoverTool}"
    exit
}


# Parsing the chain file name
# e.g:	b38-GCA_009914755.4.over.chain => "source = b38"
if {![regexp "^(.*?)(-|To|_)" [file tail $chainFile] match source]} {
    puts "...WARNING: No source extracted!"
} else {
    regsub -all "\"|'" $source "" source
    puts "...genome source: $source"
}


# Parsing of the BED file
set id 0
set L_toWrite {}
set pid [pid]
puts "...reading [file tail $BEDfileToLift]"
puts "...writing toLift.$pid.tmp.bed"
foreach L [LinesFromFile $BEDfileToLift] {
    if {[regexp "^#" $L]} {continue}
    if {$L == ""} {continue}
    set Ls [split $L "\t"]
    incr id
    
    # Creation of a BED file whith only the chrom, start and end values
    lappend L_toWrite "[join [lrange $Ls 0 2] "\t"]\t$id"
    if {![expr {$id%80000}]} {
        WriteTextInFile [join $L_toWrite "\n"] toLift.$pid.tmp.bed
        set L_toWrite {}
    }
    # Memorize the annotation columns
    set L_annotationsColumns {}
    foreach v [lrange $Ls 3 end] {
        if {[regexp "^\[0-9XYchrMT\]+:\[0-9\]+-\[0-9\]+" $v ]} {
            lappend L_annotationsColumns "${source}_$v"
        } else {
            lappend L_annotationsColumns "$v"
        }
    }
    set t($id) $L_annotationsColumns
}
WriteTextInFile [join $L_toWrite "\n"] toLift.$pid.tmp.bed


# Liftover
set command "$liftoverTool toLift.$pid.tmp.bed $chainFile lifted.$pid.tmp.bed unmapped.$pid.bed"
puts "...running:"
puts "$command"
if {[catch {eval exec $command} Message]} {
    puts "$Message"
    if {[regexp -nocase "error" $Message]} {
        file delete -force "./toLift.$pid.tmp.bed"
        file delete -force "./lifted.$pid.tmp.bed"
        file delete -force "./unmapped.$pid.bed"
        exit
    }
}


# Check and display different counts
set n_lifted [lindex [eval exec wc -l "./lifted.$pid.tmp.bed"] 0]
set n_unmapped [lindex [eval exec grep -c "^#" "./unmapped.$pid.bed"] 0]

puts "...$id genomic positions to lift"
puts "...$n_lifted genomic positions lifted"
puts "...$n_unmapped positions unmapped"

set a [expr {$id-$n_lifted}]
if {$a != $n_unmapped} {
    puts "\tplease check these counts"
}


# Writting the lifted output file
set L_toWrite {}
foreach L [LinesFromFile ./lifted.$pid.tmp.bed] {
    set Ls [split $L "\t"]
    set newLs [lrange $Ls 0 2]
    set id [lindex $Ls 3]
    lappend newLs {*}$t($id)
    lappend L_toWrite [join $newLs "\t"]
    if {![expr {$id%80000}]} {
        WriteTextInFile [join $L_toWrite "\n"] $outputFile.tmp
        set L_toWrite {}
    }
}
WriteTextInFile [join $L_toWrite "\n"] $outputFile.tmp


# Sort the lifted output file
eval exec sort -k1,1 -k2,2n $outputFile.tmp > $outputFile


# Clean
puts "...cleaning"
file delete -force "./toLift.$pid.tmp.bed"
file delete -force "./lifted.$pid.tmp.bed"
file delete -force "./unmapped.$pid.bed"
file delete -force $outputFile.tmp



================================================
FILE: share/tcl/AnnotSV/tcllib/csv/csv.tcl
================================================
# csv.tcl --
#
#	Tcl implementations of CSV reader and writer
#
# Copyright (c) 2001      by Jeffrey Hobbs
# Copyright (c) 2001-2013 by Andreas Kupries <andreas_kupries@users.sourceforge.net>
#
# See the file "license.terms" for information on usage and redistribution
# of this file, and for a DISCLAIMER OF ALL WARRANTIES.
# 
# RCS: @(#) $Id: csv.tcl,v 1.28 2011/11/23 02:22:10 andreas_kupries Exp $

package require Tcl 8.4
package provide csv 0.8.1

namespace eval ::csv {
    namespace export join joinlist read2matrix read2queue report 
    namespace export split split2matrix split2queue writematrix writequeue
}

# ::csv::join --
#
#	Takes a list of values and generates a string in CSV format.
#
# Arguments:
#	values	A list of the values to join
#	sepChar	The separator character, defaults to comma
#	delChar	The delimiter character, defaults to quote
#	delMode	If set to 'always', values are always surrounded by delChar
#
# Results:
#	A string containing the values in CSV format.

proc ::csv::join {values {sepChar ,} {delChar \"} {delMode auto}} {
    set out ""
    set sep {}
    foreach val $values {
	if {($delMode eq "always") || [string match "*\[${delChar}$sepChar\r\n\]*" $val]} {
	    append out $sep${delChar}[string map [list $delChar ${delChar}${delChar}] $val]${delChar}
	} else {
	    append out $sep${val}
	}
	set sep $sepChar
    }
    return $out
}

# ::csv::joinlist --
#
#	Takes a list of lists of values and generates a string in CSV
#	format. Each item in the list is made into a single CSV
#	formatted record in the final string, the records being
#	separated by newlines.
#
# Arguments:
#	values	A list of the lists of the values to join
#	sepChar	The separator character, defaults to comma
#	delChar	The delimiter character, defaults to quote
#	delMode	If set to 'always', values are always surrounded by delChar
#
# Results:
#	A string containing the values in CSV format, the records
#	separated by newlines.

proc ::csv::joinlist {values {sepChar ,} {delChar \"} {delMode auto}} {
    set out ""
    foreach record $values {
	# note that this is ::csv::join
	append out "[join $record $sepChar $delChar $delMode]\n"
    }
    return $out
}

# ::csv::joinmatrix --
#
#	Takes a matrix object following the API specified for the
#	struct::matrix package. Each row of the matrix is converted
#	into a single CSV formatted record in the final string, the
#	records being separated by newlines.
#
# Arguments:
#	matrix	Matrix object command.
#	sepChar	The separator character, defaults to comma
#	delChar	The delimiter character, defaults to quote
#	delMode	If set to 'always', values are always surrounded by delChar
#
# Results:
#	A string containing the values in CSV format, the records
#	separated by newlines.

proc ::csv::joinmatrix {matrix {sepChar ,} {delChar \"} {delMode auto}} {
    return [joinlist [$matrix get rect 0 0 end end] $sepChar $delChar $delMode]
}

# ::csv::iscomplete --
#
#	A predicate checking if the argument is a complete csv record.
#
# Arguments
#	data	The (partial) csv record to check.
#
# Results:
#	A boolean flag indicating the completeness of the data. The
#	result is true if the data is complete.

proc ::csv::iscomplete {data} {
    expr {1 - [regexp -all \" $data] % 2}
}

# ::csv::read2matrix --
#
#	A wrapper around "Split2matrix" reading CSV formatted
#	lines from the specified channel and adding it to the given
#	matrix.
#
# Arguments:
#	m		The matrix to add the read data too.
#	chan		The channel to read from.
#	sepChar		The separator character, defaults to comma
#	expand		The expansion mode. The default is none
#
# Results:
#	A list of the values in 'line'.

proc ::csv::read2matrix {args} {
    # FR #481023
    # See 'split2matrix' for the available expansion modes.

    # Argument syntax:
    #
    #2)            chan m
    #3)            chan m sepChar
    #3) -alternate chan m
    #4) -alternate chan m sepChar
    #4)            chan m sepChar expand
    #5) -alternate chan m sepChar expand

    set alternate 0
    set sepChar   ,
    set expand    none

    switch -exact -- [llength $args] {
	2 {
	    foreach {chan m} $args break
	}
	3 {
	    foreach {a b c} $args break
	    if {[string equal $a "-alternate"]} {
		set alternate 1
		set chan      $b
		set m         $c
	    } else {
		set chan    $a
		set m       $b
		set sepChar $c
	    }
	}
	4 {
	    foreach {a b c d} $args break
	    if {[string equal $a "-alternate"]} {
		set alternate 1
		set chan      $b
		set m         $c
		set sepChar   $d
	    } else {
		set chan    $a
		set m       $b
		set sepChar $c
		set expand  $d
	    }
	}
	5 {
	    foreach {a b c d e} $args break
	    if {![string equal $a "-alternate"]} {
		return -code error "wrong#args: Should be ?-alternate? chan m ?separator? ?expand?"
	    }
	    set alternate 1

	    set chan    $b
	    set m       $c
	    set sepChar $d
	    set expand  $e
	}
	0 - 1 -
	default {
	    return -code error "wrong#args: Should be ?-alternate? chan m ?separator? ?expand?"
	}
    }

    if {[string length $sepChar] < 1} {
	return -code error "illegal separator character \"$sepChar\", is empty"
    } elseif {[string length $sepChar] > 1} {
	return -code error "illegal separator character \"$sepChar\", is a string"
    }

    set data ""
    while {![eof $chan]} {
	if {[gets $chan line] < 0} {continue}

	# Why skip empty lines? They may be in data. Except if the
	# buffer is empty, i.e. we are between records.
	if {$line == {} && $data == {}} {continue}

       append data $line
       if {![iscomplete $data]} {
           # Odd number of quotes - must have embedded newline
           append data \n
           continue
       }

       Split2matrix $alternate $m $data $sepChar $expand
       set data ""
    }
    return
}

# ::csv::read2queue --
#
#	A wrapper around "::csv::split2queue" reading CSV formatted
#	lines from the specified channel and adding it to the given
#	queue.
#
# Arguments:
#	q		The queue to add the read data too.
#	chan		The channel to read from.
#	sepChar		The separator character, defaults to comma
#
# Results:
#	A list of the values in 'line'.

proc ::csv::read2queue {args} {
    # Argument syntax:
    #
    #2)            chan q
    #3)            chan q sepChar
    #3) -alternate chan q
    #4) -alternate chan q sepChar

    set alternate 0
    set sepChar   ,

    switch -exact -- [llength $args] {
	2 {
	    foreach {chan q} $args break
	}
	3 {
	    foreach {a b c} $args break
	    if {[string equal $a "-alternate"]} {
		set alternate 1
		set chan      $b
		set q         $c
	    } else {
		set chan    $a
		set q       $b
		set sepChar $c
	    }
	}
	4 {
	    foreach {a b c d} $args break
	    if {![string equal $a "-alternate"]} {
		return -code error "wrong#args: Should be ?-alternate? chan q ?separator?"
	    }
	    set alternate 1
	    set chan    $b
	    set q       $c
	    set sepChar $d
	}
	0 - 1 -
	default {
	    return -code error "wrong#args: Should be ?-alternate? chan q ?separator?"
	}
    }

    if {[string length $sepChar] < 1} {
	return -code error "illegal separator character \"$sepChar\", is empty"
    } elseif {[string length $sepChar] > 1} {
	return -code error "illegal separator character \"$sepChar\", is a string"
    }

    set data ""
    while {![eof $chan]} {
	if {[gets $chan line] < 0} {continue}

	# Why skip empty lines? They may be in data. Except if the
	# buffer is empty, i.e. we are between records.
	if {$line == {} && $data == {}} {continue}

	append data $line
	if {![iscomplete $data]} {
	    # Odd number of quotes - must have embedded newline
	    append data \n
	    continue
	}

	$q put [Split $alternate $data $sepChar]
	set data ""
    }
    return
}

# ::csv::report --
#
#	A report command which can be used by the matrix methods
#	"format-via" and "format2chan-via". For the latter this
#	command delegates the work to "::csv::writematrix". "cmd" is
#	expected to be either "printmatrix" or
#	"printmatrix2channel". The channel argument, "chan", has to
#	be present for the latter and must not be present for the first.
#
# Arguments:
#	cmd		Either 'printmatrix' or 'printmatrix2channel'
#	matrix		The matrix to format.
#	args		0 (chan): The channel to write to
#
# Results:
#	None for 'printmatrix2channel', else the CSV formatted string.

proc ::csv::report {cmd matrix args} {
    switch -exact -- $cmd {
	printmatrix {
	    if {[llength $args] > 0} {
		return -code error "wrong # args:\
			::csv::report printmatrix matrix"
	    }
	    return [joinlist [$matrix get rect 0 0 end end]]
	}
	printmatrix2channel {
	    if {[llength $args] != 1} {
		return -code error "wrong # args:\
			::csv::report printmatrix2channel matrix chan"
	    }
	    writematrix $matrix [lindex $args 0]
	    return ""
	}
	default {
	    return -code error "Unknown method $cmd"
	}
    }
}

# ::csv::split --
#
#	Split a string according to the rules for CSV processing.
#	This assumes that the string contains a single line of CSVs
#
# Arguments:
#	line		The string to split
#	sepChar		The separator character, defaults to comma
#
# Results:
#	A list of the values in 'line'.

proc ::csv::split {args} {
    # Argument syntax:
    #
    # (1)            line
    # (2)            line sepChar
    # (2) -alternate line
    # (3) -alternate line sepChar

    # (3)            line sepChar delChar
    # (4) -alternate line sepChar delChar

    set alternate 0
    set sepChar   ,
    set delChar   \"

    switch -exact -- [llength $args] {
	1 {
	    set line [lindex $args 0]
	}
	2 {
	    foreach {a b} $args break
	    if {[string equal $a "-alternate"]} {
		set alternate 1
		set line     $b
	    } else {
		set line    $a
		set sepChar $b
	    }
	}
	3 {
	    foreach {a b c} $args break
	    if {[string equal $a "-alternate"]} {
	        set alternate 1
		set line    $b
		set sepChar $c
	    } else {
		set line    $a
		set sepChar $b
		set delChar $c
            }
	}
	4 {
	    foreach {a b c d} $args break
	    if {![string equal $a "-alternate"]} {
		return -code error "wrong#args: Should be ?-alternate? line ?separator? ?delimiter?"
	    }
	    set alternate 1
	    set line    $b
	    set sepChar $c
	    set delChar $d
	}
	0 -
	default {
	    return -code error "wrong#args: Should be ?-alternate? line ?separator? ?delimiter?"
	}
    }

    if {[string length $sepChar] < 1} {
	return -code error "illegal separator character ${delChar}$sepChar${delChar}, is empty"
    } elseif {[string length $sepChar] > 1} {
	return -code error "illegal separator character ${delChar}$sepChar${delChar}, is a string"
    }

    if {[string length $delChar] < 1} {
	return -code error "illegal separator character \"$delChar\", is empty"
    } elseif {[string length $delChar] > 1} {
	return -code error "illegal separator character \"$delChar\", is a string"
    }

    return [Split $alternate $line $sepChar $delChar]
}

proc ::csv::Split {alternate line sepChar {delChar \"}} {
    # Protect the sepchar from special interpretation by
    # the regex calls below.

    set sepRE \[\[.${sepChar}.]]
    set delRE \[\[.${delChar}.]]

    if {$alternate} {
	# The alternate syntax requires a different parser.
	# A variation of the string map / regsub parser for the
	# regular syntax was tried but does not handle embedded
	# doubled " well (testcase csv-91.3 was 'knownBug', sole
	# one, still a bug). Now we just tokenize the input into
	# the primary parts (sep char, "'s and the rest) and then
	# use an explicitly coded state machine (DFA) to parse
	# and convert token sequences.

	## puts 1->>$line<<
	set line [string map [list \
		$sepChar \0$sepChar\0 \
		$delChar \0${delChar}\0 \
		] $line]

	## puts 2->>$line<<
	set line [string map [list \0\0 \0] $line]
	regsub "^\0" $line {} line
	regsub "\0$" $line {} line

	## puts 3->>$line<<

	set val ""
	set res ""
	set state base

	## puts 4->>[::split $line \0]
	foreach token [::split $line \0] {

	    ## puts "\t*= $state\t>>$token<<"
	    switch -exact -- $state {
		base {
		    if {[string equal $token "${delChar}"]} {
			set state qvalue
			continue
		    }
		    if {[string equal $token $sepChar]} {
			lappend res $val
			set val ""
			continue
		    }
		    append val $token
		}
		qvalue {
		    if {[string equal $token "${delChar}"]} {
			# May end value, may be a doubled "
			set state endordouble
			continue
		    }
		    append val $token
		}
		endordouble {
		    if {[string equal $token "${delChar}"]} {
			# Doubled ", append to current value
			append val ${delChar} 
			set state qvalue
			continue
		    }
		    # Last " was end of quoted value. Close it.
		    # We expect current as $sepChar

		    lappend res $val
		    set          val ""
		    set state base

		    if {[string equal $token $sepChar]} {continue}

		    # Undoubled " in middle of text. Just assume that
		    # remainder is another qvalue.
		    set state qvalue
		}
		default {
		    return -code error "Internal error, illegal parsing state"
		}
	    }
	}

	## puts "/= $state\t>>$val<<"

	lappend res $val

	## puts 5->>$res<<
	return $res
    } else {
	regsub -- "$sepRE${delRE}${delRE}$" $line $sepChar\0${delChar}${delChar}\0 line
	regsub -- "^${delRE}${delRE}$sepRE" $line \0${delChar}${delChar}\0$sepChar line
	regsub -all -- {(^${delChar}|${delChar}$)} $line \0 line

	set line [string map [list \
		$sepChar${delChar}${delChar}${delChar} $sepChar\0${delChar} \
		${delChar}${delChar}${delChar}$sepChar ${delChar}\0$sepChar \
		${delChar}${delChar}           ${delChar} \
		${delChar}             \0 \
		] $line]

	set end 0
	while {[regexp -indices -start $end -- {(\0)[^\0]*(\0)} $line \
		-> start end]} {
	    set start [lindex $start 0]
	    set end   [lindex $end 0]
	    set range [string range $line $start $end]
	    if {[string first $sepChar $range] >= 0} {
		set line [string replace $line $start $end \
			[string map [list $sepChar \1] $range]]
	    }
	    incr end
	}
	set line [string map [list $sepChar \0 \1 $sepChar \0 {} ] $line]
	return [::split $line \0]

    }
}

# ::csv::split2matrix --
#
#	Split a string according to the rules for CSV processing.
#	This assumes that the string contains a single line of CSVs.
#	The resulting list of values is appended to the specified
#	matrix, as a new row. The code assumes that the matrix provides
#	the same interface as the queue provided by the 'struct'
#	module of tcllib, "add row" in particular.
#
# Arguments:
#	m		The matrix to write the resulting list to.
#	line		The string to split
#	sepChar		The separator character, defaults to comma
#	expand		The expansion mode. The default is none
#
# Results:
#	A list of the values in 'line', written to 'q'.

proc ::csv::split2matrix {args} {
    # FR #481023

    # Argument syntax:
    #
    #2)            m line
    #3)            m line sepChar
    #3) -alternate m line
    #4) -alternate m line sepChar
    #4)            m line sepChar expand
    #5) -alternate m line sepChar expand

    set alternate 0
    set sepChar   ,
    set expand    none

    switch -exact -- [llength $args] {
	2 {
	    foreach {m line} $args break
	}
	3 {
	    foreach {a b c} $args break
	    if {[string equal $a "-alternate"]} {
		set alternate 1
		set m         $b
		set line      $c
	    } else {
		set m       $a
		set line    $b
		set sepChar $c
	    }
	}
	4 {
	    foreach {a b c d} $args break
	    if {[string equal $a "-alternate"]} {
		set alternate 1
		set m         $b
		set line      $c
		set sepChar   $d
	    } else {
		set m       $a
		set line    $b
		set sepChar $c
		set expand  $d
	    }
	}
	4 {
	    foreach {a b c d e} $args break
	    if {![string equal $a "-alternate"]} {
		return -code error "wrong#args: Should be ?-alternate? m line ?separator? ?expand?"
	    }
	    set alternate 1

	    set m       $b
	    set line    $c
	    set sepChar $d
	    set expand  $e
	}
	0 - 1 -
	default {
	    return -code error "wrong#args: Should be ?-alternate? m line ?separator? ?expand?"
	}
    }

    if {[string length $sepChar] < 1} {
	return -code error "illegal separator character \"$sepChar\", is empty"
    } elseif {[string length $sepChar] > 1} {
	return -code error "illegal separator character \"$sepChar\", is a string"
    }

    Split2matrix $alternate $m $line $sepChar $expand
    return
}

proc ::csv::Split2matrix {alternate m line sepChar expand} {
    set csv [Split $alternate $line $sepChar]

    # Expansion modes
    # - none  : default, behaviour of original implementation.
    #           no expansion is done, lines are silently truncated
    #           to the number of columns in the matrix.
    #
    # - empty : A matrix without columns is expanded to the number
    #           of columns in the first line added to it. All
    #           following lines are handled as if "mode == none"
    #           was set.
    #
    # - auto  : Full auto-mode. The matrix is expanded as needed to
    #           hold all columns of all lines.

    switch -exact -- $expand {
	none {}
	empty {
	    if {[$m columns] == 0} {
		$m add columns [llength $csv]
	    }
	}
	auto {
	    if {[$m columns] < [llength $csv]} {
		$m add columns [expr {[llength $csv] - [$m columns]}]
	    }
	}
    }
    $m add row $csv
    return
}

# ::csv::split2queue --
#
#	Split a string according to the rules for CSV processing.
#	This assumes that the string contains a single line of CSVs.
#	The resulting list of values is appended to the specified
#	queue, as a single item. IOW each item in the queue represents
#	a single CSV record. The code assumes that the queue provides
#	the same interface as the queue provided by the 'struct'
#	module of tcllib, "put" in particular.
#
# Arguments:
#	q		The queue to write the resulting list to.
#	line		The string to split
#	sepChar		The separator character, defaults to comma
#
# Results:
#	A list of the values in 'line', written to 'q'.

proc ::csv::split2queue {args} {
    # Argument syntax:
    #
    #2)            q line
    #3)            q line sepChar
    #3) -alternate q line
    #4) -alternate q line sepChar

    set alternate 0
    set sepChar   ,

    switch -exact -- [llength $args] {
	2 {
	    foreach {q line} $args break
	}
	3 {
	    foreach {a b c} $args break
	    if {[string equal $a "-alternate"]} {
		set alternate 1
		set q         $b
		set line      $c
	    } else {
		set q       $a
		set line    $b
		set sepChar $c
	    }
	}
	4 {
	    foreach {a b c d} $args break
	    if {![string equal $a "-alternate"]} {
		return -code error "wrong#args: Should be ?-alternate? q line ?separator?"
	    }
	    set alternate 1

	    set q       $b
	    set line    $c
	    set sepChar $d
	}
	0 - 1 -
	default {
	    return -code error "wrong#args: Should be ?-alternate? q line ?separator?"
	}
    }

    if {[string length $sepChar] < 1} {
	return -code error "illegal separator character \"$sepChar\", is empty"
    } elseif {[string length $sepChar] > 1} {
	return -code error "illegal separator character \"$sepChar\", is a string"
    }

    $q put [Split $alternate $line $sepChar]
    return
}

# ::csv::writematrix --
#
#	A wrapper around "::csv::join" taking the rows in a matrix and
#	writing them as CSV formatted lines into the channel.
#
# Arguments:
#	m		The matrix to take the data to write from.
#	chan		The channel to write into.
#	sepChar		The separator character, defaults to comma
#
# Results:
#	None.

proc ::csv::writematrix {m chan {sepChar ,} {delChar \"}} {
    set n [$m rows]
    for {set r 0} {$r < $n} {incr r} {
	puts $chan [join [$m get row $r] $sepChar $delChar]
    }

    # Memory intensive alternative:
    # puts $chan [joinlist [m get rect 0 0 end end] $sepChar $delChar]
    return
}

# ::csv::writequeue --
#
#	A wrapper around "::csv::join" taking the rows in a queue and
#	writing them as CSV formatted lines into the channel.
#
# Arguments:
#	q		The queue to take the data to write from.
#	chan		The channel to write into.
#	sepChar		The separator character, defaults to comma
#
# Results:
#	None.

proc ::csv::writequeue {q chan {sepChar ,} {delChar \"}} {
    while {[$q size] > 0} {
	puts $chan [join [$q get] $sepChar $delChar]
    }

    # Memory intensive alternative:
    # puts $chan [joinlist [$q get [$q size]] $sepChar $delChar]
    return
}



================================================
FILE: share/tcl/AnnotSV/tcllib/csv/pkgIndex.tcl
================================================
if {![package vsatisfies [package provide Tcl] 8.4]} {return}
package ifneeded csv 0.8.1 [list source [file join $dir csv.tcl]]


================================================
FILE: share/tcl/AnnotSV/tcllib/http/autoproxy.tcl
================================================
# autoproxy.tcl - Copyright (C) 2002-2008 Pat Thoyts <patthoyts@users.sf.net>
#
# On Unix the standard for identifying the local HTTP proxy server
# seems to be to use the environment variable http_proxy or ftp_proxy and
# no_proxy to list those domains to be excluded from proxying.
#
# On Windows we can retrieve the Internet Settings values from the registry
# to obtain pretty much the same information.
#
# With this information we can setup a suitable filter procedure for the
# Tcl http package and arrange for automatic use of the proxy.
#
# Example:
#   package require autoproxy
#   autoproxy::init
#   set tok [http::geturl http://wiki.tcl.tk/]
#   http::data $tok
#
# To support https add:
#   package require tls
#   http::register https 443 ::autoproxy::tls_socket

package require http;                   # tcl
package require uri;                    # tcllib
package require base64;                 # tcllib

namespace eval ::autoproxy {
    variable options

    if {! [info exists options]} {
        array set options {
            proxy_host ""
            proxy_port 80
            no_proxy   {}
            basic      {}
            authProc   {}
        }
    }

    variable uid
    if {![info exists uid]} { set uid 0 }

    variable winregkey
    set winregkey [join {
        HKEY_CURRENT_USER
        Software Microsoft Windows
        CurrentVersion "Internet Settings"
    } \\]
}

# -------------------------------------------------------------------------
# Description:
#   Obtain configuration options for the server.
#
proc ::autoproxy::cget {option} {
    variable options
    switch -glob -- $option {
        -host -
        -proxy_h* { set options(proxy_host) }
        -port -
        -proxy_p* { set options(proxy_port) }
        -no*      { set options(no_proxy) }
        -basic    { set options(basic) }
        -authProc { set options(authProc) }
        default {
            set err [join [lsort [array names options]] ", -"]
            return -code error "bad option \"$option\":\
                       must be one of -$err"
        }
    }
}

# -------------------------------------------------------------------------
# Description:
#  Configure the autoproxy package settings.
#  You may only configure one type of authorisation at a time as once we hit
#  -basic, -digest or -ntlm - all further args are passed to the protocol
#  specific script.
#
#  Of course, most of the point of this package is to fill as many of these
#  fields as possible automatically. You should call autoproxy::init to
#  do automatic configuration and then call this method to refine the details.
#
proc ::autoproxy::configure {args} {
    variable options

    if {[llength $args] == 0} {
        foreach {opt value} [array get options] {
            lappend r -$opt $value
        }
        return $r
    }

    while {[string match "-*" [set option [lindex $args 0]]]} {
        switch -glob -- $option {
            -host -
            -proxy_h* { set options(proxy_host) [Pop args 1]}
            -port -
            -proxy_p* { set options(proxy_port) [Pop args 1]}
            -no*      { set options(no_proxy) [Pop args 1] }
            -basic    { Pop args; configure:basic $args ; break }
            -authProc { set options(authProc) [Pop args 1] }
            --        { Pop args; break }
            default {
                set opts [join [lsort [array names options]] ", -"]
                return -code error "bad option \"$option\":\
                       must be one of -$opts"
            }
        }
        Pop args
    }
}

# -------------------------------------------------------------------------
# Description:
#  Initialise the http proxy information from the environment or the
#  registry (Win32)
#
#  This procedure will load the http package and re-writes the
#  http::geturl method to add in the authorisation header.
#
#  A better solution will be to arrange for the http package to request the
#  authorisation key on receiving an authorisation reqest.
#
proc ::autoproxy::init {{httpproxy {}} {no_proxy {}}} {
    global tcl_platform
    global env
    variable winregkey
    variable options

    # Look for standard environment variables.
    if {[string length $httpproxy] > 0} {

        # nothing to do

    } elseif {[info exists env(http_proxy)]} {
        set httpproxy $env(http_proxy)
        if {[info exists env(no_proxy)]} {
            set no_proxy $env(no_proxy)
        }
    } else {
        if {$tcl_platform(platform) == "windows"} {
            #checker -scope block exclude nonPortCmd
            package require registry 1.0
            array set reg {ProxyEnable 0 ProxyServer "" ProxyOverride {}}
            catch {
                # IE5 changed ProxyEnable from a binary to a dword value.
                switch -exact -- [registry type $winregkey "ProxyEnable"] {
                    dword {
                        set reg(ProxyEnable) [registry get $winregkey "ProxyEnable"]
                    }
                    binary {
                        set v [registry get $winregkey "ProxyEnable"]
                        binary scan $v i reg(ProxyEnable)
                    }
                    default {
                        return -code error "unexpected type found for\
                               ProxyEnable registry item"
                    }
                }
                set reg(ProxyServer) [GetWin32Proxy http]
                set reg(ProxyOverride) [registry get $winregkey "ProxyOverride"]
            }
            if {![string is bool $reg(ProxyEnable)]} {
                set reg(ProxyEnable) 0
            }
            if {$reg(ProxyEnable)} {
                set httpproxy $reg(ProxyServer)
                set no_proxy  $reg(ProxyOverride)
            }
        }
    }

    # If we found something ...
    if {[string length $httpproxy] > 0} {
        # The http_proxy is supposed to be a URL - lets make sure.
        if {![regexp {\w://.*} $httpproxy]} {
            set httpproxy "http://$httpproxy"
        }

        # decompose the string.
        array set proxy [uri::split $httpproxy]

        # turn the no_proxy value into a tcl list
        set no_proxy [string map {; " " , " "} $no_proxy]

        # configure ourselves
        configure -proxy_host $proxy(host) \
            -proxy_port $proxy(port) \
            -no_proxy $no_proxy

        # Lift the authentication details from the environment if present.
        if {[string length $proxy(user)] < 1 \
                && [info exists env(http_proxy_user)] \
                && [info exists env(http_proxy_pass)]} {
            set proxy(user) $env(http_proxy_user)
            set proxy(pwd)  $env(http_proxy_pass)
        }

        # Maybe the proxy url has authentication parameters?
        # At this time, only Basic is supported.
        if {[string length $proxy(user)] > 0} {
            configure -basic -username $proxy(user) -password $proxy(pwd)
        }

        # setup and configure the http package to use our proxy info.
        http::config -proxyfilter [namespace origin filter]
    }
    return $httpproxy
}

# autoproxy::GetWin32Proxy --
#
#	Parse the Windows Internet Settings registry key and return the
#	protocol proxy requested. If the same proxy is in use for all
#	protocols, then that will be returned. Otherwise the string is
#	parsed. Example:
#	 ftp=proxy:80;http=proxy:80;https=proxy:80
#
proc ::autoproxy::GetWin32Proxy {protocol} {
    variable winregkey
    #checker exclude nonPortCmd
    set proxies [split [registry get $winregkey "ProxyServer"] ";"]
    foreach proxy $proxies {
        if {[string first = $proxy] == -1} {
            return $proxy
        } else {
            foreach {prot host} [split $proxy =] break
            if {[string compare $protocol $prot] == 0} {
                return $host
            }
        }
    }
    return -code error "failed to identify an '$protocol' proxy"
}

# -------------------------------------------------------------------------
# Description:
#  Pop the nth element off a list. Used in options processing.
proc ::autoproxy::Pop {varname {nth 0}} {
    upvar $varname args
    set r [lindex $args $nth]
    set args [lreplace $args $nth $nth]
    return $r
}

# -------------------------------------------------------------------------
# Description
#   An example user authentication procedure.
# Returns:
#   A two element list consisting of the users authentication id and
#   password.
proc ::autoproxy::defAuthProc {{user {}} {passwd {}} {realm {}}} {
    if {[string length $realm] > 0} {
        set title "Realm: $realm"
    } else {
        set title {}
    }

    # If you are using BWidgets then the following will do:
    #
    #    package require BWidget
    #    return [PasswdDlg .defAuthDlg -parent {} -transient 0 \
    #         -title $title -logintext $user -passwdtext $passwd]
    #
    # if you just have Tk and no BWidgets --

    set dlg [toplevel .autoproxy_defAuthProc -class Dialog]
    wm title $dlg $title
    wm withdraw $dlg
    label $dlg.ll -text Login -underline 0 -anchor w
    entry $dlg.le -textvariable [namespace current]::${dlg}:l
    label $dlg.pl -text Password -underline 0 -anchor w
    entry $dlg.pe -show * -textvariable [namespace current]::${dlg}:p
    button $dlg.ok -text OK -default active -width -11 \
        -command [list set [namespace current]::${dlg}:ok 1]
    grid $dlg.ll $dlg.le -sticky news
    grid $dlg.pl $dlg.pe -sticky news
    grid $dlg.ok - -sticky e
    grid columnconfigure $dlg 1 -weight 1
    bind $dlg <Return> [list $dlg.ok invoke]
    bind $dlg <Alt-l> [list focus $dlg.le]
    bind $dlg <Alt-p> [list focus $dlg.pe]
    variable ${dlg}:l $user; variable ${dlg}:p $passwd
    variable ${dlg}:ok 0
    wm deiconify $dlg; focus $dlg.pe; update idletasks
    set old [::grab current]; grab $dlg
    tkwait variable [namespace current]::${dlg}:ok
    grab release $dlg ; if {[llength $old] > 0} {::grab $old}
    set r [list [set ${dlg}:l] [set ${dlg}:p]]
    unset ${dlg}:l; unset ${dlg}:p; unset ${dlg}:ok
    destroy $dlg
    return $r
}

# -------------------------------------------------------------------------

# Description:
#  Implement support for the Basic authentication scheme (RFC 1945,2617).
# Options:
#  -user userid  - pass in the user ID (May require Windows NT domain
#                  as DOMAIN\\username)
#  -password pwd - pass in the user's password.
#  -realm realm  - pass in the http realm.
#
proc ::autoproxy::configure:basic {arglist} {
    variable options
    array set opts {user {} passwd {} realm {}}
    foreach {opt value} $arglist {
        switch -glob -- $opt {
            -u* { set opts(user) $value}
            -p* { set opts(passwd) $value}
            -r* { set opts(realm) $value}
            default {
                return -code error "invalid option \"$opt\": must be one of\
                     -username or -password or -realm"
            }
        }
    }

    # If nothing was provided, try calling the authProc
    if {$options(authProc) != {} \
            && ($opts(user) == {} || $opts(passwd) == {})} {
        set r [$options(authProc) $opts(user) $opts(passwd) $opts(realm)]
        set opts(user) [lindex $r 0]
        set opts(passwd) [lindex $r 1]
    }

    # Store the encoded string to avoid re-encoding all the time.
    set options(basic) [list "Proxy-Authorization" \
                            [concat "Basic" \
                                 [base64::encode $opts(user):$opts(passwd)]]]
    return
}

# -------------------------------------------------------------------------
# Description:
#  An http package proxy filter. This attempts to work out if a request
#  should go via the configured proxy using a glob comparison against the
#  no_proxy list items. A typical no_proxy list might be
#   [list localhost *.my.domain.com 127.0.0.1]
#
#  If we are going to use the proxy - then insert the proxy authorization
#  header.
#
proc ::autoproxy::filter {host} {
    variable options

    if {$options(proxy_host) == {}} {
        return {}
    }

    foreach domain $options(no_proxy) {
        if {[string match $domain $host]} {
            return {}
        }
    }

    # Add authorisation header to the request (by Anders Ramdahl)
    catch {
        upvar state State
        if {$options(basic) != {}} {
            set State(-headers) [concat $options(basic) $State(-headers)]
        }
    }
    return [list $options(proxy_host) $options(proxy_port)]
}

# -------------------------------------------------------------------------
# autoproxy::tls_connect --
#
#	Create a connection to a remote machine through a proxy
#	if necessary. This is used by the tls_socket command for
#	use with the http package but can also be used more generally
#	provided your proxy will permit CONNECT attempts to ports
#	other than port 443 (many will not).
#	This command defers to 'tunnel_connect' to link to the target
#	host and then upgrades the link to SSL/TLS
#
proc ::autoproxy::tls_connect {args} {
    variable options
    if {[string length $options(proxy_host)] > 0} {
        set s [eval [linsert $args 0 tunnel_connect]]
        fconfigure $s -blocking 1 -buffering none -translation binary
        if {[string equal "-async" [lindex $args end-2]]} {
            eval [linsert [lrange $args 0 end-3] 0 ::tls::import $s]
        } else {
            eval [linsert [lrange $args 0 end-2] 0 ::tls::import $s]
        }
    } else {
        set s [eval [linsert $args 0 ::tls::socket]]
    }
    return $s
}

# autoproxy::tunnel_connect --
#
#	Create a connection to a remote machine through a proxy
#	if necessary. This is used by the tls_socket command for
#	use with the http package but can also be used more generally
#	provided your proxy will permit CONNECT attempts to ports
#	other than port 443 (many will not).
#	Note: this command just opens the socket through the proxy to
#	the target machine -- no SSL/TLS negotiation is done yet.
#
proc ::autoproxy::tunnel_connect {args} {
    variable options
    variable uid
    set code ok

    # args = ... host port
    # and the host/port is the actual endpoint we want to talk to,
    # regardless of any proxying. See our caller tls_connect for
    # ensuring this by peeking into the http package internals.

    # To handle proxying properly we have to run through 'filter'
    # (again), to ensure that proxy exceptions are correctly taken
    # into account.

    set proxy [filter [lindex $args end-1]]

    if {[llength $proxy]} {
        foreach {proxy_host proxy_port} $proxy break

        set token [namespace current]::[incr uid]
        upvar #0 $token state
        set state(endpoint) [lrange $args end-1 end]
        set state(state) connect
        set state(data) ""
        set state(useragent) [http::config -useragent]
        set state(sock) [::socket $proxy_host $proxy_port]
        fileevent $state(sock) writable [namespace code [list tunnel_write $token]]
        vwait [set token](state)

        if {[string length $state(error)] > 0} {
            set result $state(error)
            close $state(sock)
            unset state
            set code error
        } elseif {[info exists state(code)] &&
                  (($state(code) >= 300) ||
                   ($state(code) < 200))} {
            set result [lindex $state(headers) 0]
            regexp {HTTP/\d.\d\s+\d+\s+(.*)} $result -> result
            close $state(sock)
            set code error
        } else {
            set result $state(sock)
        }
        unset state
    } else {
        set result [eval [linsert $args 0 ::socket]]
    }
    return -code $code $result
}

proc ::autoproxy::tunnel_write {token} {
    upvar #0 $token state
    variable options
    fileevent $state(sock) writable {}
    if {[catch {set state(error) [fconfigure $state(sock) -error]} err]} {
        set state(error) $err
    }
    if {[string length $state(error)] > 0} {
        set state(state) error
        return
    }
    fconfigure $state(sock) -blocking 0 -buffering line -translation crlf
    foreach {host port} $state(endpoint) break
    puts $state(sock) "CONNECT $host:$port HTTP/1.1"
    puts $state(sock) "Host: $host"
    if {[string length $state(useragent)] > 0} {
        puts $state(sock) "User-Agent: $state(useragent)"
    }
    puts $state(sock) "Proxy-Connection: keep-alive"
    puts $state(sock) "Connection: keep-alive"
    if {[string length $options(basic)] > 0} {
        puts $state(sock) [join $options(basic) ": "]
    }
    puts $state(sock) ""

    fileevent $state(sock) readable [namespace code [list tunnel_read $token]]
    return
}

proc ::autoproxy::tunnel_read {token} {
    upvar #0 $token state
    set len [gets $state(sock) line]
    if {[eof $state(sock)]} {
        fileevent $state(sock) readable {}
        set state(state) eof
    } elseif {$len == 0} {
        set state(code) [lindex [split [lindex $state(headers) 0] { }] 1]
        fileevent $state(sock) readable {}
        set state(state) ok
    } else {
        lappend state(headers) $line
    }
}

# autoproxy::tls_socket --
#
#	This can be used to handle TLS connections independently of
#	proxy presence. It can only be used with the Tcl http package
#	and to use it you must do:
#	   http::register https 443 ::autoproxy::tls_socket
#	After that you can use the http::geturl command to access
#	secure web pages and any proxy details will be handled for you.
#
proc ::autoproxy::tls_socket {args} {
    variable options

    # Look into the http package for the actual target. If a proxy is in use then
    # The function appends the proxy host and port and not the target.

    upvar host uhost port uport
    set args [lrange $args 0 end-2]
    lappend args $uhost $uport

    set s [eval [linsert $args 0 tls_connect]]

    # record the tls connection status in the http state array.
    upvar state state
    tls::handshake $s
    set state(tls_status) [tls::status $s]

    return $s
}

# -------------------------------------------------------------------------

package provide autoproxy 1.5.3

# -------------------------------------------------------------------------
#
# Local variables:
#   mode: tcl
#   indent-tabs-mode: nil
# End:


================================================
FILE: share/tcl/AnnotSV/tcllib/http/pkgIndex.tcl
================================================
if {![package vsatisfies [package provide Tcl] 8.2]} {return}
package ifneeded autoproxy 1.5.3 [list source [file join $dir autoproxy.tcl]]


================================================
FILE: share/tcl/AnnotSV/tcllib/json/json.tcl
================================================
# json.tcl --
#
#	JSON parser for Tcl. Management code, Tcl/C detection and selection.
#
# Copyright (c) 2013 by Andreas Kupries

# @mdgen EXCLUDE: jsonc.tcl

package require Tcl 8.4
namespace eval ::json {}

# ### ### ### ######### ######### #########
## Management of json implementations.

# ::json::LoadAccelerator --
#
#	Loads a named implementation, if possible.
#
# Arguments:
#	key	Name of the implementation to load.
#
# Results:
#	A boolean flag. True if the implementation
#	was successfully loaded; and False otherwise.

proc ::json::LoadAccelerator {key} {
    variable accel
    set r 0
    switch -exact -- $key {
	critcl {
	    # Critcl implementation of json requires Tcl 8.4.
	    if {![package vsatisfies [package provide Tcl] 8.4]} {return 0}
	    if {[catch {package require tcllibc}]} {return 0}
	    # Check for the jsonc 1.1.1 API we are fixing later.
	    set r [llength [info commands ::json::many_json2dict_critcl]]
	}
	tcl {
	    variable selfdir
	    source [file join $selfdir json_tcl.tcl]
	    set r 1
	}
        default {
            return -code error "invalid accelerator/impl. package $key:\
                must be one of [join [KnownImplementations] {, }]"
        }
    }
    set accel($key) $r
    return $r
}

# ::json::SwitchTo --
#
#	Activates a loaded named implementation.
#
# Arguments:
#	key	Name of the implementation to activate.
#
# Results:
#	None.

proc ::json::SwitchTo {key} {
    variable accel
    variable loaded
    variable apicmds

    if {[string equal $key $loaded]} {
	# No change, nothing to do.
	return
    } elseif {![string equal $key ""]} {
	# Validate the target implementation of the switch.

	if {![info exists accel($key)]} {
	    return -code error "Unable to activate unknown implementation \"$key\""
	} elseif {![info exists accel($key)] || !$accel($key)} {
	    return -code error "Unable to activate missing implementation \"$key\""
	}
    }

    # Deactivate the previous implementation, if there was any.

    if {![string equal $loaded ""]} {
	foreach c $apicmds {
	    rename ::json::${c} ::json::${c}_$loaded
	}
    }

    # Activate the new implementation, if there is any.

    if {![string equal $key ""]} {
	foreach c $apicmds {
	    rename ::json::${c}_$key ::json::${c}
	}
    }

    # Remember the active implementation, for deactivation by future
    # switches.

    set loaded $key
    return
}

# ::json::Implementations --
#
#	Determines which implementations are
#	present, i.e. loaded.
#
# Arguments:
#	None.
#
# Results:
#	A list of implementation keys.

proc ::json::Implementations {} {
    variable accel
    set res {}
    foreach n [array names accel] {
	if {!$accel($n)} continue
	lappend res $n
    }
    return $res
}

# ::json::KnownImplementations --
#
#	Determines which implementations are known
#	as possible implementations.
#
# Arguments:
#	None.
#
# Results:
#	A list of implementation keys. In the order
#	of preference, most prefered first.

proc ::json::KnownImplementations {} {
    return {critcl tcl}
}

proc ::json::Names {} {
    return {
	critcl {tcllibc based}
	tcl    {pure Tcl}
    }
}

# ### ### ### ######### ######### #########
## Initialization: Data structures.

namespace eval ::json {
    variable  selfdir [file dirname [info script]]
    variable  accel
    array set accel   {tcl 0 critcl 0}
    variable  loaded  {}

    variable apicmds {
	json2dict
	many-json2dict
    }
}

# ### ### ### ######### ######### #########
## Wrapper fix for the jsonc package to match APIs.

proc ::json::many-json2dict_critcl {args} {
    eval [linsert $args 0 ::json::many_json2dict_critcl]
}

# ### ### ### ######### ######### #########
## Initialization: Choose an implementation,
## most prefered first. Loads only one of the
## possible implementations. And activates it.

namespace eval ::json {
    variable e
    foreach e [KnownImplementations] {
	if {[LoadAccelerator $e]} {
	    SwitchTo $e
	    break
	}
    }
    unset e
}

# ### ### ### ######### ######### #########
## Tcl implementation of validation, shared for Tcl and C implementation.
##
## The regexp based validation is consistently faster than json-c.
## Suspected reasons: Tcl REs are mainly in C as well, and json-c has
## overhead in constructing its own data structures. While irrelevant
## to validation json-c still builds them, it has no mode doing pure
## syntax checking.

namespace eval ::json {
    # Regular expression for tokenizing a JSON text (cf. http://json.org/)

    # tokens consisting of a single character
    variable singleCharTokens { "{" "}" ":" "\\[" "\\]" "," }
    variable singleCharTokenRE "\[[join $singleCharTokens {}]\]"

    # quoted string tokens
    variable escapableREs { "[\\\"\\\\/bfnrt]" "u[[:xdigit:]]{4}" "." }
    variable escapedCharRE "\\\\(?:[join $escapableREs |])"
    variable unescapedCharRE {[^\\\"]}
    variable stringRE "\"(?:$escapedCharRE|$unescapedCharRE)*\""

    # as above, for validation
    variable escapableREsv { "[\\\"\\\\/bfnrt]" "u[[:xdigit:]]{4}" }
    variable escapedCharREv "\\\\(?:[join $escapableREsv |])"
    variable stringREv "\"(?:$escapedCharREv|$unescapedCharRE)*\""

    # (unquoted) words
    variable wordTokens { "true" "false" "null" }
    variable wordTokenRE [join $wordTokens "|"]

    # number tokens
    # negative lookahead (?!0)[[:digit:]]+ might be more elegant, but
    # would slow down tokenizing by a factor of up to 3!
    variable positiveRE {[1-9][[:digit:]]*}
    variable cardinalRE "-?(?:$positiveRE|0)"
    variable fractionRE {[.][[:digit:]]+}
    variable exponentialRE {[eE][+-]?[[:digit:]]+}
    variable numberRE "${cardinalRE}(?:$fractionRE)?(?:$exponentialRE)?"

    # JSON token, and validation
    variable tokenRE "$singleCharTokenRE|$stringRE|$wordTokenRE|$numberRE"
    variable tokenREv "$singleCharTokenRE|$stringREv|$wordTokenRE|$numberRE"


    # 0..n white space characters
    set whiteSpaceRE {[[:space:]]*}

    # Regular expression for validating a JSON text
    variable validJsonRE "^(?:${whiteSpaceRE}(?:$tokenREv))*${whiteSpaceRE}$"
}


# Validate JSON text
# @param jsonText JSON text
# @return 1 iff $jsonText conforms to the JSON grammar
#           (@see http://json.org/)
proc ::json::validate {jsonText} {
    variable validJsonRE

    return [regexp -- $validJsonRE $jsonText]
}

# ### ### ### ######### ######### #########
## These three procedures shared between Tcl and Critcl implementations.
## See also package "json::write".

#lm ATTENTION !
#lm Taken from wiki.tcl.tk
proc ::json::dict2json {dictionary} {
    dict for {key value} $dictionary {
        if {[string match {\[*\]} $value]} {
            lappend Result "\"$key\":$value"
        } elseif {![catch {dict size $value}]} {
            lappend Result "\"$key\":\"[dict2json $value]\""
        } else {
            lappend Result "\"$key\":\"$value\""
        }
    }
    return "\{[join $Result ",\n"]\}"
}

proc ::json::dict2json_old {dictVal} {
    # XXX: Currently this API isn't symmetrical, as to create proper
    # XXX: JSON text requires type knowledge of the input data
    set json ""
    set prefix ""

    foreach {key val} $dictVal {
	# key must always be a string, val may be a number, string or
	# bare word (true|false|null)
	if {0 && ![string is double -strict $val]
	    && ![regexp {^(?:true|false|null)$} $val]} {
	    set val "\"$val\""
	}
    	append json "$prefix\"$key\": $val" \n
	set prefix ,
    }

    return "\{${json}\}"
}

proc ::json::list2json {listVal} {
    return "\[[join $listVal ,]\]"
}

proc ::json::string2json {str} {
    return "\"$str\""
}

# ### ### ### ######### ######### #########
## Ready

package provide json 1.3.3


================================================
FILE: share/tcl/AnnotSV/tcllib/json/json_tcl.tcl
================================================
#
#   JSON parser for Tcl.
#
#   See http://www.json.org/ && http://www.ietf.org/rfc/rfc4627.txt
#
#   Total rework of the code published with version number 1.0 by
#   Thomas Maeder, Glue Software Engineering AG
#
#   $Id: json.tcl,v 1.7 2011/11/10 21:05:58 andreas_kupries Exp $
#

if {![package vsatisfies [package provide Tcl] 8.5]} {
    package require dict
}

# Parse JSON text into a dict
# @param jsonText JSON text
# @return dict (or list) containing the object represented by $jsonText
proc ::json::json2dict_tcl {jsonText} {
    variable tokenRE

    set tokens [regexp -all -inline -- $tokenRE $jsonText]
    set nrTokens [llength $tokens]
    set tokenCursor 0

#puts T:\t[join $tokens \nT:\t]
    return [parseValue $tokens $nrTokens tokenCursor]
}

# Parse multiple JSON entities in a string into a list of dictionaries
# @param jsonText JSON text to parse
# @param max      Max number of entities to extract.
# @return list of (dict (or list) containing the objects) represented by $jsonText
proc ::json::many-json2dict_tcl {jsonText {max -1}} {
    variable tokenRE

    if {$max == 0} {
	return -code error -errorCode {JSON BAD-LIMIT ZERO} \
	    "Bad limit 0 of json entities to extract."
    }

    set tokens [regexp -all -inline -- $tokenRE $jsonText]
    set nrTokens [llength $tokens]
    set tokenCursor 0

    set result {}
    set found 0
    set n $max
    while {$n != 0} {
	if {$tokenCursor >= $nrTokens} break
	lappend result [parseValue $tokens $nrTokens tokenCursor]
	incr found
	if {$n > 0} {incr n -1}
    }

    if {$n > 0} {
	return -code error -errorCode {JSON BAD-LIMIT TOO LARGE} \
	    "Bad limit $max of json entities to extract, found only $found."
    }

    return $result
}

# Throw an exception signaling an unexpected token
proc ::json::unexpected {tokenCursor token expected} {
    return -code error -errorcode [list JSON UNEXPECTED $tokenCursor $expected] \
	"unexpected token \"$token\" at position $tokenCursor; expecting $expected"
}

# Get rid of the quotes surrounding a string token and substitute the
# real characters for escape sequences within it
# @param token
# @return unquoted unescaped value of the string contained in $token
proc ::json::unquoteUnescapeString {tokenCursor token} {
    variable stringREv
    set unquoted [string range $token 1 end-1]

    if {![regexp $stringREv $token]} {
	unexpected $tokenCursor $token STRING
    }

    set res [subst -nocommands -novariables $unquoted]
    return $res
}

# Parse an object member
# @param tokens list of tokens
# @param nrTokens length of $tokens
# @param tokenCursorName name (in caller's context) of variable
#                        holding current position in $tokens
# @param objectDictName name (in caller's context) of dict
#                       representing the JSON object of which to
#                       parse the next member
proc ::json::parseObjectMember {tokens nrTokens tokenCursorName objectDictName} {
    upvar $tokenCursorName tokenCursor
    upvar $objectDictName objectDict

    set token [lindex $tokens $tokenCursor]
    set tc $tokenCursor
    incr tokenCursor

    set leadingChar [string index $token 0]
    if {$leadingChar eq "\""} {
        set memberName [unquoteUnescapeString $tc $token]

        if {$tokenCursor == $nrTokens} {
            unexpected $tokenCursor "END" "\":\""
        } else {
            set token [lindex $tokens $tokenCursor]
            incr tokenCursor

            if {$token eq ":"} {
                set memberValue [parseValue $tokens $nrTokens tokenCursor]
                dict set objectDict $memberName $memberValue
            } else {
                unexpected $tokenCursor $token "\":\""
            }
        }
    } else {
        unexpected $tokenCursor $token "STRING"
    }
}

# Parse the members of an object
# @param tokens list of tokens
# @param nrTokens length of $tokens
# @param tokenCursorName name (in caller's context) of variable
#                        holding current position in $tokens
# @param objectDictName name (in caller's context) of dict
#                       representing the JSON object of which to
#                       parse the next member
proc ::json::parseObjectMembers {tokens nrTokens tokenCursorName objectDictName} {
    upvar $tokenCursorName tokenCursor
    upvar $objectDictName objectDict

    while true {
        parseObjectMember $tokens $nrTokens tokenCursor objectDict

        set token [lindex $tokens $tokenCursor]
        incr tokenCursor

        switch -exact $token {
            "," {
                # continue
            }
            "\}" {
                break
            }
            default {
                unexpected $tokenCursor $token "\",\"|\"\}\""
            }
        }
    }
}

# Parse an object
# @param tokens list of tokens
# @param nrTokens length of $tokens
# @param tokenCursorName name (in caller's context) of variable
#                        holding current position in $tokens
# @return parsed object (Tcl dict)
proc ::json::parseObject {tokens nrTokens tokenCursorName} {
    upvar $tokenCursorName tokenCursor

    if {$tokenCursor == $nrTokens} {
        unexpected $tokenCursor "END" "OBJECT"
    } else {
        set result [dict create]

        set token [lindex $tokens $tokenCursor]

        if {$token eq "\}"} {
            # empty object
            incr tokenCursor
        } else {
            parseObjectMembers $tokens $nrTokens tokenCursor result
        }

        return $result
    }
}

# Parse the elements of an array
# @param tokens list of tokens
# @param nrTokens length of $tokens
# @param tokenCursorName name (in caller's context) of variable
#                        holding current position in $tokens
# @param resultName name (in caller's context) of the list
#                   representing the JSON array
proc ::json::parseArrayElements {tokens nrTokens tokenCursorName resultName} {
    upvar $tokenCursorName tokenCursor
    upvar $resultName result

    while true {
        lappend result [parseValue $tokens $nrTokens tokenCursor]

        if {$tokenCursor == $nrTokens} {
            unexpected $tokenCursor "END" "\",\"|\"\]\""
        } else {
            set token [lindex $tokens $tokenCursor]
            incr tokenCursor

            switch -exact $token {
                "," {
                    # continue
                }
                "\]" {
                    break
                }
                default {
                    unexpected $tokenCursor $token "\",\"|\"\]\""
                }
            }
        }
    }
}

# Parse an array
# @param tokens list of tokens
# @param nrTokens length of $tokens
# @param tokenCursorName name (in caller's context) of variable
#                        holding current position in $tokens
# @return parsed array (Tcl list)
proc ::json::parseArray {tokens nrTokens tokenCursorName} {
    upvar $tokenCursorName tokenCursor

    if {$tokenCursor == $nrTokens} {
        unexpected $tokenCursor "END" "ARRAY"
    } else {
        set result {}

        set token [lindex $tokens $tokenCursor]

        set leadingChar [string index $token 0]
        if {$leadingChar eq "\]"} {
            # empty array
            incr tokenCursor
        } else {
            parseArrayElements $tokens $nrTokens tokenCursor result
        }

        return $result
    }
}

# Parse a value
# @param tokens list of tokens
# @param nrTokens length of $tokens
# @param tokenCursorName name (in caller's context) of variable
#                        holding current position in $tokens
# @return parsed value (dict, list, string, number)
proc ::json::parseValue {tokens nrTokens tokenCursorName} {
    upvar $tokenCursorName tokenCursor

    if {$tokenCursor == $nrTokens} {
        unexpected $tokenCursor "END" "VALUE"
    } else {
        set token [lindex $tokens $tokenCursor]
	set tc $tokenCursor
        incr tokenCursor

        set leadingChar [string index $token 0]
        switch -exact -- $leadingChar {
            "\{" {
                return [parseObject $tokens $nrTokens tokenCursor]
            }
            "\[" {
                return [parseArray $tokens $nrTokens tokenCursor]
            }
            "\"" {
                # quoted string
                return [unquoteUnescapeString $tc $token]
            }
            "t" -
            "f" -
            "n" {
                # bare word: true, false, null (return as is)
                return $token
            }
            default {
                # number?
                if {[string is double -strict $token]} {
                    return $token
                } else {
                    unexpected $tokenCursor $token "VALUE"
                }
            }
        }
    }
}


================================================
FILE: share/tcl/AnnotSV/tcllib/json/json_write.tcl
================================================
# json_write.tcl --
#
#	Commands for the generation of JSON (Java Script Object Notation).
#
# Copyright (c) 2009-2011 Andreas Kupries <andreas_kupries@sourceforge.net>
#
# See the file "license.terms" for information on usage and redistribution
# of this file, and for a DISCLAIMER OF ALL WARRANTIES.
# 
# RCS: @(#) $Id: json_write.tcl,v 1.2 2011/08/24 20:09:44 andreas_kupries Exp $

# ### ### ### ######### ######### #########
## Requisites

package require Tcl 8.5

namespace eval ::json::write {
    namespace export \
	string array object indented aligned

    namespace ensemble create
}

# ### ### ### ######### ######### #########
## API.

proc ::json::write::indented {{bool {}}} {
    variable indented

    if {[llength [info level 0]] > 2} {
	return -code error {wrong # args: should be "json::write indented ?bool?"}
    } elseif {[llength [info level 0]] == 2} {
	if {![::string is boolean -strict $bool]} {
	    return -code error "Expected boolean, got \"$bool\""
	}
	set indented $bool
	if {!$indented} {
	    variable aligned 0
	}
    }

    return $indented
}

proc ::json::write::aligned {{bool {}}} {
    variable aligned

    if {[llength [info level 0]] > 2} {
	return -code error {wrong # args: should be "json::write aligned ?bool?"}
    } elseif {[llength [info level 0]] == 2} {
	if {![::string is boolean -strict $bool]} {
	    return -code error "Expected boolean, got \"$bool\""
	}
	set aligned $bool
	if {$aligned} {
	    variable indented 1
	}
    }

    return $aligned
}

proc ::json::write::string {s} {
    variable quotes
    return "\"[::string map $quotes $s]\""
}

proc ::json::write::array {args} {
    # always compact form.
    return "\[[join $args ,]\]"
}

proc ::json::write::object {args} {
    # The dict in args maps string keys to json-formatted data. I.e.
    # we have to quote the keys, but not the values, as the latter are
    # already in the proper format.

    variable aligned
    variable indented

    if {[llength $args] %2 == 1} {
	return -code error {wrong # args, expected an even number of arguments}
    }

    set dict {}
    foreach {k v} $args {
	lappend dict [string $k] $v
    }

    if {$aligned} {
	set max [MaxKeyLength $dict]
    }

    if {$indented} {
	set content {}
	foreach {k v} $dict {
	    if {$aligned} {
		set k [AlignLeft $max $k]
	    }
	    if {[::string match *\n* $v]} {
		# multi-line value
		lappend content "    $k : [Indent $v {    } 1]"
	    } else {
		# single line value.
		lappend content "    $k : $v"
	    }
	}
	if {[llength $content]} {
	    return "\{\n[join $content ,\n]\n\}"
	} else {
	    return "\{\}"
	}
    } else {
	# ultra compact form.
	set tmp {}
	foreach {k v} $dict {
	    lappend tmp "$k:$v"
	}
	return "\{[join $tmp ,]\}"
    }
}

# ### ### ### ######### ######### #########
## Internals.

proc ::json::write::Indent {text prefix skip} {
    set pfx ""
    set result {}
    foreach line [split $text \n] {
	if {!$skip} { set pfx $prefix } else { incr skip -1 }
	lappend result ${pfx}$line
    }
    return [join $result \n]
}

proc ::json::write::MaxKeyLength {dict} {
    # Find the max length of the keys in the dictionary.

    set lengths 0 ; # This will be the max if the dict is empty, and
		    # prevents the mathfunc from throwing errors for
		    # that case.

    foreach str [dict keys $dict] {
	lappend lengths [::string length $str]
    }

    return [tcl::mathfunc::max {*}$lengths]
}

proc ::json::write::AlignLeft {fieldlen str} {
    return [format %-${fieldlen}s $str]
    #return $str[::string repeat { } [expr {$fieldlen - [::string length $str]}]]
}

# ### ### ### ######### ######### #########

namespace eval ::json::write {
    # Configuration of the layout to write.

    # indented = boolean. objects are indented.
    # aligned  = boolean. object keys are aligned vertically.

    # aligned  => indented.

    # Combinations of the format specific entries
    # I A |
    # - - + ---------------------
    # 0 0 | Ultracompact (no whitespace, single line)
    # 1 0 | Indented
    # 0 1 | Not possible, per the implications above.
    # 1 1 | Indented + vertically aligned keys
    # - - + ---------------------

    variable indented 1
    variable aligned  1

    variable quotes \
	[list "\"" "\\\"" \\ \\\\ \b \\b \f \\f \n \\n \r \\r \t \\t \
	     \x00 \\u0000 \x01 \\u0001 \x02 \\u0002 \x03 \\u0003 \
	     \x04 \\u0004 \x05 \\u0005 \x06 \\u0006 \x07 \\u0007 \
	     \x0b \\u000b \x0e \\u000e \x0f \\u000f \x10 \\u0010 \
	     \x11 \\u0011 \x12 \\u0012 \x13 \\u0013 \x14 \\u0014 \
	     \x15 \\u0015 \x16 \\u0016 \x17 \\u0017 \x18 \\u0018 \
	     \x19 \\u0019 \x1a \\u001a \x1b \\u001b \x1c \\u001c \
	     \x1d \\u001d \x1e \\u001e \x1f \\u001f \x7f \\u007f \
	     \x80 \\u0080 \x81 \\u0081 \x82 \\u0082 \x83 \\u0083 \
	     \x84 \\u0084 \x85 \\u0085 \x86 \\u0086 \x87 \\u0087 \
	     \x88 \\u0088 \x89 \\u0089 \x8a \\u008a \x8b \\u008b \
	     \x8c \\u008c \x8d \\u008d \x8e \\u008e \x8f \\u008f \
	     \x90 \\u0090 \x91 \\u0091 \x92 \\u0092 \x93 \\u0093 \
	     \x94 \\u0094 \x95 \\u0095 \x96 \\u0096 \x97 \\u0097 \
	     \x98 \\u0098 \x99 \\u0099 \x9a \\u009a \x9b \\u009b \
	     \x9c \\u009c \x9d \\u009d \x9e \\u009e \x9f \\u009f ]
}

# ### ### ### ######### ######### #########
## Ready

package provide json::write 1.0.3
return


================================================
FILE: share/tcl/AnnotSV/tcllib/json/jsonc.tcl
================================================
# jsonc.tcl --
#
#       Implementation of a JSON parser in C.
#	Binding to a yacc/bison parser by Mikhail.
#
# Copyright (c) 2013,2015 - critcl wrapper - Andreas Kupries <andreas_kupries@users.sourceforge.net>
# Copyright (c) 2013      - C binding      - mi+tcl.tk-2013@aldan.algebra.com

package require critcl
# @sak notprovided jsonc
package provide jsonc 1.1.2
package require Tcl 8.4

#critcl::cheaders -g
#critcl::debug memory symbols
critcl::cheaders -Ic c/*.h
critcl::csources c/*.c

# # ## ### Import base declarations, forwards ### ## # #

critcl::ccode {
    #include <json_y.h>
}

# # ## ### Main Conversion ### ## # #

namespace eval ::json {
    critcl::ccommand json2dict_critcl {dummy I objc objv} {
	struct context context = { NULL };

	if (objc != 2) {
	    Tcl_WrongNumArgs(I, 1, objv, "json");
	    return TCL_ERROR;
	}

	context.text   = Tcl_GetStringFromObj(objv[1], &context.remaining);
	context.I      = I;
	context.has_error = 0;
	context.result = TCL_ERROR;

	jsonparse (&context);
	return context.result;
    }

    # Issue with critcl 2 used here. Cannot use '-', incomplete distinction of C and Tcl names.
    # The json.tcl file making use of this code has a wrapper fixing the issue.
    critcl::ccommand many_json2dict_critcl {dummy I objc objv} {
	struct context context = { NULL };

	int                      max;
	int                      found;

	Tcl_Obj* result = Tcl_NewListObj (0, NULL);

	if ((objc < 2) || (objc > 3)) {
	    Tcl_WrongNumArgs(I, 1, objv, "jsonText ?max?");
	    return TCL_ERROR;
	}

	if (objc == 3) {
	    if (Tcl_GetIntFromObj(I, objv[2], &max) != TCL_OK) {
		return TCL_ERROR;
	    }
	    if (max <= 0) {
		Tcl_AppendResult (I, "Bad limit ",
				  Tcl_GetString (objv[2]),
				  " of json entities to extract.",
				  NULL);
		Tcl_SetErrorCode (I, "JSON", "BAD-LIMIT", NULL);
		return TCL_ERROR;
	    }

	} else {
	    max = -1;
	}

	context.text   = Tcl_GetStringFromObj(objv[1], &context.remaining);
	context.I      = I;
	context.has_error = 0;
	found  = 0;

	/* Iterate over the input until
	 * - we have gotten all requested values.
	 * - we have run out of input
	 * - we have run into an error
	 */

	while ((max < 0) || max) {
	    context.result = TCL_ERROR;
	    jsonparse (&context);

	    /* parse error, abort */
	    if (context.result != TCL_OK) {
		Tcl_DecrRefCount (result);
		return TCL_ERROR;
	    }

	    /* Proper value extracted, extend result */
	    found ++;
	    Tcl_ListObjAppendElement(I, result,
				     Tcl_GetObjResult (I));

	    /* Count down on the number of still missing
	     * values, if not asking for all (-1)
	     */
	    if (max > 0) max --;

	    /* Jump over trailing whitespace for proper end-detection */
	    jsonskip (&context);

	    /* Abort if we have consumed all input */
	    if (!context.remaining) break;

	    /* Clear scratch pad before continuing */
	    context.obj = NULL;
	}

	/* While all parses were ok we reached end of
	 * input without getting all requested values,
	 * this is an error
	 */
	if (max > 0) {
	    char buf [30];
	    sprintf (buf, "%d", found);
            Tcl_ResetResult (I);
	    Tcl_AppendResult (I, "Bad limit ",
			      Tcl_GetString (objv[2]),
			      " of json entities to extract, found only ",
			      buf,
			      ".",
			      NULL);
	    Tcl_SetErrorCode (I, "JSON", "BAD-LIMIT", "TOO", "LARGE", NULL);
	    Tcl_DecrRefCount (result);
	    return TCL_ERROR;
	}

	/* We are good and done */
	Tcl_SetObjResult(I, result);
	return TCL_OK;
    }

    if 0 {critcl::ccommand validate_critcl {dummy I objc objv} {
	struct context context = { NULL };

	if (objc != 2) {
	    Tcl_WrongNumArgs(I, 1, objv, "jsonText");
	    return TCL_ERROR;
	}

	context.text   = Tcl_GetStringFromObj(objv[1], &context.remaining);
	context.I      = I;
	context.result = TCL_ERROR;

	/* Iterate over the input until we have run
	 * out of text, or encountered an error. We
	 * use only the lexer here, and told it to not
	* create superfluous token values.
	 */

	while (context.remaining) {
	    if (jsonlex (&context) == -1) {
		Tcl_SetObjResult(I, Tcl_NewBooleanObj (0));
		return TCL_OK;
	    }
	}

	/* We are good and done */
	Tcl_SetObjResult(I, Tcl_NewBooleanObj (1));
	return TCL_OK;
    }}
}


================================================
FILE: share/tcl/AnnotSV/tcllib/json/pkgIndex.tcl
================================================
# Tcl package index file, version 1.1

if {![package vsatisfies [package provide Tcl] 8.4]} {return}
package ifneeded json 1.3.3 [list source [file join $dir json.tcl]]

if {![package vsatisfies [package provide Tcl] 8.5]} {return}
package ifneeded json::write 1.0.3 [list source [file join $dir json_write.tcl]]


================================================
FILE: share/tcl/AnnotSV/tcllib/tar/pkgIndex.tcl
================================================
if {![package vsatisfies [package provide Tcl] 8.4]} {
    # PRAGMA: returnok
    return
}
package ifneeded tar 0.10 [list source [file join $dir tar.tcl]]


================================================
FILE: share/tcl/AnnotSV/tcllib/tar/tar.tcl
================================================
# tar.tcl --
#
#       Creating, extracting, and listing posix tar archives
#
# Copyright (c) 2004    Aaron Faupell <afaupell@users.sourceforge.net>
# Copyright (c) 2013    Andreas Kupries <andreas_kupries@users.sourceforge.net>
#                       (GNU tar @LongLink support).
#
# See the file "license.terms" for information on usage and redistribution
# of this file, and for a DISCLAIMER OF ALL WARRANTIES.
# 
# RCS: @(#) $Id: tar.tcl,v 1.17 2012/09/11 17:22:24 andreas_kupries Exp $

package require Tcl 8.4
package provide tar 0.10

namespace eval ::tar {}

proc ::tar::parseOpts {acc opts} {
    array set flags $acc
    foreach {x y} $acc {upvar $x $x}
    
    set len [llength $opts]
    set i 0
    while {$i < $len} {
        set name [string trimleft [lindex $opts $i] -]
        if {![info exists flags($name)]} {return -code error "unknown option \"$name\""}
        if {$flags($name) == 1} {
            set $name [lindex $opts [expr {$i + 1}]]
            incr i $flags($name)
        } elseif {$flags($name) > 1} {
            set $name [lrange $opts [expr {$i + 1}] [expr {$i + $flags($name)}]]
            incr i $flags($name)
        } else {
            set $name 1
        }
        incr i
    }
}

proc ::tar::pad {size} {
    set pad [expr {512 - ($size % 512)}]
    if {$pad == 512} {return 0}
    return $pad
}

proc ::tar::seekorskip {ch off wh} {
    if {[tell $ch] < 0} {
	if {$wh!="current"} {
	    error "WHENCE=$wh not supported on non-seekable channel $ch"
	}
	skip $ch $off
	return
    }
    seek $ch $off $wh
    return
}

proc ::tar::skip {ch skipover} {
    while {$skipover > 0} {
	set requested $skipover

	# Limit individual skips to 64K, as a compromise between speed
	# of skipping (Number of read requests), and memory usage
	# (Note how skipped block is read into memory!). While the
	# read data is immediately discarded it still generates memory
	# allocation traffic, gets copied, etc. Trying to skip the
	# block in one go without the limit may cause us to run out of
	# (virtual) memory, or just induce swapping, for nothing.

	if {$requested > 65536} {
	    set requested 65536
	}

	set skipped [string length [read $ch $requested]]

	# Stop in short read into the end of the file.
	if {!$skipped && [eof $ch]} break

	# Keep track of how much is (not) skipped yet.
	incr skipover -$skipped
    }
    return
}

proc ::tar::readHeader {data} {
    binary scan $data a100a8a8a8a12a12a8a1a100a6a2a32a32a8a8a155 \
                      name mode uid gid size mtime cksum type \
                      linkname magic version uname gname devmajor devminor prefix

    foreach x {name type linkname} {
        set $x [string trim [set $x] "\x00"]
    }
    foreach x {uid gid size mtime cksum} {
        set $x [format %d 0[string trim [set $x] " \x00"]]
    }
    set mode [string trim $mode " \x00"]

    if {$magic == "ustar "} {
        # gnu tar
        # not fully supported
        foreach x {uname gname prefix} {
            set $x [string trim [set $x] "\x00"]
        }
        foreach x {devmajor devminor} {
            set $x [format %d 0[string trim [set $x] " \x00"]]
        }
    } elseif {$magic == "ustar\x00"} {
        # posix tar
        foreach x {uname gname prefix} {
            set $x [string trim [set $x] "\x00"]
        }
        foreach x {devmajor devminor} {
            set $x [format %d 0[string trim [set $x] " \x00"]]
        }
    } else {
        # old style tar
        foreach x {uname gname devmajor devminor prefix} { set $x {} }
        if {$type == ""} {
            if {[string match */ $name]} {
                set type 5
            } else {
                set type 0
            }
        }
    }

    return [list name $name mode $mode uid $uid gid $gid size $size mtime $mtime \
                 cksum $cksum type $type linkname $linkname magic $magic \
                 version $version uname $uname gname $gname devmajor $devmajor \
                 devminor $devminor prefix $prefix]
}

proc ::tar::contents {file args} {
    set chan 0
    parseOpts {chan 0} $args
    if {$chan} {
	set fh $file
    } else {
	set fh [::open $file]
	fconfigure $fh -encoding binary -translation lf -eofchar {}
    }
    set ret {}
    while {![eof $fh]} {
        array set header [readHeader [read $fh 512]]
	HandleLongLink $fh header
        if {$header(name) == ""} break
	if {$header(prefix) != ""} {append header(prefix) /}
        lappend ret $header(prefix)$header(name)
        seekorskip $fh [expr {$header(size) + [pad $header(size)]}] current
    }
    if {!$chan} {
	close $fh
    }
    return $ret
}

proc ::tar::stat {tar {file {}} args} {
    set chan 0
    parseOpts {chan 0} $args
    if {$chan} {
	set fh $tar
    } else {
	set fh [::open $tar]
	fconfigure $fh -encoding binary -translation lf -eofchar {}
    }
    set ret {}
    while {![eof $fh]} {
        array set header [readHeader [read $fh 512]]
	HandleLongLink $fh header
        if {$header(name) == ""} break
	if {$header(prefix) != ""} {append header(prefix) /}
        seekorskip $fh [expr {$header(size) + [pad $header(size)]}] current
        if {$file != "" && "$header(prefix)$header(name)" != $file} {continue}
        set header(type) [string map {0 file 5 directory 3 characterSpecial 4 blockSpecial 6 fifo 2 link} $header(type)]
        set header(mode) [string range $header(mode) 2 end]
        lappend ret $header(prefix)$header(name) [list mode $header(mode) uid $header(uid) gid $header(gid) \
                    size $header(size) mtime $header(mtime) type $header(type) linkname $header(linkname) \
                    uname $header(uname) gname $header(gname) devmajor $header(devmajor) devminor $header(devminor)]
    }
    if {!$chan} {
	close $fh
    }
    return $ret
}

proc ::tar::get {tar file args} {
    set chan 0
    parseOpts {chan 0} $args
    if {$chan} {
	set fh $tar
    } else {
	set fh [::open $tar]
	fconfigure $fh -encoding binary -translation lf -eofchar {}
    }
    while {![eof $fh]} {
	set data [read $fh 512]
        array set header [readHeader $data]
	HandleLongLink $fh header
        if {$header(name) == ""} break
	if {$header(prefix) != ""} {append header(prefix) /}
        set name [string trimleft $header(prefix)$header(name) /]
        if {$name == $file} {
            set file [read $fh $header(size)]
            if {!$chan} {
		close $fh
	    }
            return $file
        }
        seekorskip $fh [expr {$header(size) + [pad $header(size)]}] current
    }
    if {!$chan} {
	close $fh
    }
    return {}
}

proc ::tar::untar {tar args} {
    set nooverwrite 0
    set data 0
    set nomtime 0
    set noperms 0
    set chan 0
    parseOpts {dir 1 file 1 glob 1 nooverwrite 0 nomtime 0 noperms 0 chan 0} $args
    if {![info exists dir]} {set dir [pwd]}
    set pattern *
    if {[info exists file]} {
        set pattern [string map {* \\* ? \\? \\ \\\\ \[ \\\[ \] \\\]} $file]
    } elseif {[info exists glob]} {
        set pattern $glob
    }

    set ret {}
    if {$chan} {
	set fh $tar
    } else {
	set fh [::open $tar]
	fconfigure $fh -encoding binary -translation lf -eofchar {}
    }
    while {![eof $fh]} {
        array set header [readHeader [read $fh 512]]
	HandleLongLink $fh header
        if {$header(name) == ""} break
	if {$header(prefix) != ""} {append header(prefix) /}
        set name [string trimleft $header(prefix)$header(name) /]
        if {![string match $pattern $name] || ($nooverwrite && [file exists $name])} {
            seekorskip $fh [expr {$header(size) + [pad $header(size)]}] current
            continue
        }

        set name [file join $dir $name]
        if {![file isdirectory [file dirname $name]]} {
            file mkdir [file dirname $name]
            lappend ret [file dirname $name] {}
        }
        if {[string match {[0346]} $header(type)]} {
            if {[catch {::open $name w+} new]} {
                # sometimes if we dont have write permission we can still delete
                catch {file delete -force $name}
                set new [::open $name w+]
            }
            fconfigure $new -encoding binary -translation lf -eofchar {}
            fcopy $fh $new -size $header(size)
            close $new
            lappend ret $name $header(size)
        } elseif {$header(type) == 5} {
            file mkdir $name
            lappend ret $name {}
        } elseif {[string match {[12]} $header(type)] && $::tcl_platform(platform) == "unix"} {
            catch {file delete $name}
            if {![catch {file link [string map {1 -hard 2 -symbolic} $header(type)] $name $header(linkname)}]} {
                lappend ret $name {}
            }
        }
        seekorskip $fh [pad $header(size)] current
        if {![file exists $name]} continue

        if {$::tcl_platform(platform) == "unix"} {
            if {!$noperms} {
                catch {file attributes $name -permissions 0[string range $header(mode) 2 end]}
            }
            catch {file attributes $name -owner $header(uid) -group $header(gid)}
            catch {file attributes $name -owner $header(uname) -group $header(gname)}
        }
        if {!$nomtime} {
            file mtime $name $header(mtime)
        }
    }
    if {!$chan} {
	close $fh
    }
    return $ret
}

## 
 # ::tar::statFile
 # 
 # Returns stat info about a filesystem object, in the form of an info 
 # dictionary like that returned by ::tar::readHeader.
 # 
 # The mode, uid, gid, mtime, and type entries are always present. 
 # The size and linkname entries are present if relevant for this type 
 # of object. The uname and gname entries are present if the OS supports 
 # them. No devmajor or devminor entry is present.
 ##

proc ::tar::statFile {name followlinks} {
    if {$followlinks} {
        file stat $name stat
    } else {
        file lstat $name stat
    }
    
    set ret {}
    
    if {$::tcl_platform(platform) == "unix"} {
        lappend ret mode 1[file attributes $name -permissions]
        lappend ret uname [file attributes $name -owner]
        lappend ret gname [file attributes $name -group]
        if {$stat(type) == "link"} {
            lappend ret linkname [file link $name]
        }
    } else {
        lappend ret mode [lindex {100644 100755} [expr {$stat(type) == "directory"}]]
    }
    
    lappend ret  uid $stat(uid)  gid $stat(gid)  mtime $stat(mtime) \
      type $stat(type)
    
    if {$stat(type) == "file"} {lappend ret size $stat(size)}
    
    return $ret
}

## 
 # ::tar::formatHeader
 # 
 # Opposite operation to ::tar::readHeader; takes a file name and info 
 # dictionary as arguments, returns a corresponding (POSIX-tar) header.
 # 
 # The following dictionary entries must be present:
 #   mode
 #   type
 # 
 # The following dictionary entries are used if present, otherwise 
 # the indicated default is used:
 #   uid       0
 #   gid       0
 #   size      0
 #   mtime     [clock seconds]
 #   linkname  {}
 #   uname     {}
 #   gname     {}
 #   
 # All other dictionary entries, including devmajor and devminor, are 
 # presently ignored.
 ##

proc ::tar::formatHeader {name info} {
    array set A {
        linkname ""
        uname ""
        gname ""
        size 0
        gid  0
        uid  0
    }
    set A(mtime) [clock seconds]
    array set A $info
    array set A {devmajor "" devminor ""}

    set type [string map {file 0 directory 5 characterSpecial 3 \
      blockSpecial 4 fifo 6 link 2 socket A} $A(type)]
    
    set osize  [format %o $A(size)]
    set ogid   [format %o $A(gid)]
    set ouid   [format %o $A(uid)]
    set omtime [format %o $A(mtime)]
    
    set name [string trimleft $name /]
    if {[string length $name] > 255} {
        return -code error "path name over 255 chars"
    } elseif {[string length $name] > 100} {
	set common [string range $name end-99 154]
	if {[set splitpoint [string first / $common]] == -1} {
	    return -code error "path name cannot be split into prefix and name"
	}
	set prefix [string range $name 0 end-100][string range $common 0 $splitpoint-1]
	set name   [string range $common $splitpoint+1 end][string range $name 155 end]
    } else {
        set prefix ""
    }

    set header [binary format a100A8A8A8A12A12A8a1a100A6a2a32a32a8a8a155a12 \
                              $name $A(mode)\x00 $ouid\x00 $ogid\x00\
                              $osize\x00 $omtime\x00 {} $type \
                              $A(linkname) ustar\x00 00 $A(uname) $A(gname)\
                              $A(devmajor) $A(devminor) $prefix {}]

    binary scan $header c* tmp
    set cksum 0
    foreach x $tmp {incr cksum $x}

    return [string replace $header 148 155 [binary format A8 [format %o $cksum]\x00]]
}


proc ::tar::recurseDirs {files followlinks} {
    foreach x $files {
        if {[file isdirectory $x] && ([file type $x] != "link" || $followlinks)} {
            if {[set more [glob -dir $x -nocomplain *]] != ""} {
                eval lappend files [recurseDirs $more $followlinks]
            } else {
                lappend files $x
            }
        }
    }
    return $files
}

proc ::tar::writefile {in out followlinks name} {
     puts -nonewline $out [formatHeader $name [statFile $in $followlinks]]
     set size 0
     if {[file type $in] == "file" || ($followlinks && [file type $in] == "link")} {
         set in [::open $in]
         fconfigure $in -encoding binary -translation lf -eofchar {}
         set size [fcopy $in $out]
         close $in
     }
     puts -nonewline $out [string repeat \x00 [pad $size]]
}

proc ::tar::create {tar files args} {
    set dereference 0
    set chan 0
    parseOpts {dereference 0 chan 0} $args

    if {$chan} {
	set fh $tar
    } else {
	set fh [::open $tar w+]
	fconfigure $fh -encoding binary -translation lf -eofchar {}
    }
    foreach x [recurseDirs $files $dereference] {
        writefile $x $fh $dereference $x
    }
    puts -nonewline $fh [string repeat \x00 1024]

    if {!$chan} {
	close $fh
    }
    return $tar
}

proc ::tar::add {tar files args} {
    set dereference 0
    set prefix ""
    set quick 0
    parseOpts {dereference 0 prefix 1 quick 0} $args
    
    set fh [::open $tar r+]
    fconfigure $fh -encoding binary -translation lf -eofchar {}
    
    if {$quick} then {
        seek $fh -1024 end
    } else {
        set data [read $fh 512]
        while {[regexp {[^\0]} $data]} {
            array set header [readHeader $data]
            seek $fh [expr {$header(size) + [pad $header(size)]}] current
            set data [read $fh 512]
        }
        seek $fh -512 current
    }

    foreach x [recurseDirs $files $dereference] {
        writefile $x $fh $dereference $prefix$x
    }
    puts -nonewline $fh [string repeat \x00 1024]

    close $fh
    return $tar
}

proc ::tar::remove {tar files} {
    set n 0
    while {[file exists $tar$n.tmp]} {incr n}
    set tfh [::open $tar$n.tmp w]
    set fh [::open $tar r]

    fconfigure $fh  -encoding binary -translation lf -eofchar {}
    fconfigure $tfh -encoding binary -translation lf -eofchar {}

    while {![eof $fh]} {
        array set header [readHeader [read $fh 512]]
        if {$header(name) == ""} {
            puts -nonewline $tfh [string repeat \x00 1024]
            break
        }
	if {$header(prefix) != ""} {append header(prefix) /}
        set name $header(prefix)$header(name)
        set len [expr {$header(size) + [pad $header(size)]}]
        if {[lsearch $files $name] > -1} {
            seek $fh $len current
        } else {
            seek $fh -512 current
            fcopy $fh $tfh -size [expr {$len + 512}]
        }
    }

    close $fh
    close $tfh

    file rename -force $tar$n.tmp $tar
}

proc ::tar::HandleLongLink {fh hv} {
    upvar 1 $hv header thelongname thelongname

    # @LongName Part I.
    if {$header(type) == "L"} {
	# Size == Length of name. Read it, and pad to full 512
	# size.  After that is a regular header for the actual
	# file, where we have to insert the name. This is handled
	# by the next iteration and the part II below.
	set thelongname [string trimright [read $fh $header(size)] \000]
	seekorskip $fh [pad $header(size)] current
	return -code continue
    }
    # Not supported yet: type 'K' for LongLink (long symbolic links).

    # @LongName, part II, get data from previous entry, if defined.
    if {[info exists thelongname]} {
	set header(name) $thelongname
	# Prevent leakage to further entries.
	unset thelongname
    }

    return
}


================================================
FILE: tests/AnnotSV/README
================================================
# Bash environment
##################

# The "set -e" option instructs bash to immediately exit if any command has a non-zero exit status.
set -eo pipefail



# Checks only for 1 test directory 
##################################

=> Need to be run in each directory:
./command_Tcl.sh >& command_Tcl.log

gr error command_Tcl.log

gr "ok - Finished" command_Tcl.log
tail -2 command_Tcl.log




## Automation of all tests (to check)
##################################### 

./scripts/check_all_public_test_directory.sh >& ./check_all_public_test_directory.log &




## There should no longer be a path in the VCF inputs 
#####################################################

grep [^\\.0-9+-]/[^\\.0-9+-]  test_*/input/*vcf




================================================
FILE: tests/AnnotSV/scripts/check_all_public_test_directory.sh
================================================
#!/bin/bash

# Timing: test_01  --> test_34 
#         13:18:21     14:30:55
# ~1h15

for f in test_*/command_Tcl.sh
do
        d=`dirname $f`
        cd $d
        echo "######## $d "
	echo "###############################################################################"
        date
        ./command_Tcl.sh &> command_Tcl.log
        grep -i error command_Tcl.log
        grep "ok - Finished" command_Tcl.log
        tail -2 command_Tcl.log
        echo ""
        cd ..
done


echo "ok - Finished all checkings"



================================================
FILE: tests/AnnotSV/scripts/check_end_values.tcl
================================================
#!/usr/bin/env tclsh

proc ContentFromFile {{Fichier ""}} {
    if {[string equal $Fichier ""]} {return ""}
    set f     [open $Fichier r]
    set Texte [read -nonewline $f]
    close $f
    return $Texte
}

proc LinesFromFile {{Fichier ""}} {
    return [split [ContentFromFile $Fichier] "\n"]
}

set fileToCheck [lindex $argv 0]

set test "Ok"
foreach L [LinesFromFile $fileToCheck] {
    set INFO [lindex $L end]
    if {![regexp "END=(\[^;\]+)" $INFO match END]} {set END "---"}
    set svtype [lindex $L 1]
    set start [lindex $L end-2]
    set end [lindex $L end-1]
    if {[regexp $svtype "TRA BND"]} {
        if {$start ne $end} {
            #puts "--- TRA/BND: $L"
            set test "TRAorBNDnotOK"
        }
    } else {
        if {$END ne $end} {
            puts "--- $END ne $end : $L"
            set test "SVnotOK"
        }
    }
}

puts $test
return $test



================================================
FILE: tests/AnnotSV/scripts/check_includeCI.tcl
================================================
#!/usr/bin/env tclsh

proc ContentFromFile {{Fichier ""}} {
    if {[string equal $Fichier ""]} {return ""}
    set f     [open $Fichier r]
    set Texte [read -nonewline $f]
    close $f
    return $Texte
}

proc LinesFromFile {{Fichier ""}} {
    return [split [ContentFromFile $Fichier] "\n"]
}

set fileToCheck [lindex $argv 0]

set test "Ok"

foreach L [LinesFromFile $fileToCheck] {
        set INFO [lindex $L end]
        if {![regexp "END=(\[^;\]+)" $INFO match END]} {set END "---"}
        set svtype [lindex $L 1]
        set start [lindex $L end-2]
        set end [lindex $L end-1]
        if {![regexp "CIPOS(\[^=\])=(\[^;\]+)" [lindex $L end] match CIPOS]} {set CIPOS "---"}
        if {![regexp "CIEND(\[^=\])=(\[^;\]+)" [lindex $L end] match CIEND]} {set CIEND "---"}
        set cipos [lindex [split $CIPOS ","] 0]
        set ciend [lindex [split $CIEND ","] 1]
        if {$ciend eq ""} {continue}
        if {$svtype ne "TRA"} {
                if {[expr {$END+$ciend}] ne $end} {
                        puts "[lrange $L 0 4] -- cipos=$cipos ciend=$ciend END=$END"
			set test "notOK"
                }
        } else {
                # pour les TRA : end = $POS (du VCF) + $ciend + 1
                if {[expr {$end-$start}] ne [expr {$ciend-$cipos+1}]} {
                        puts "--- TRA: [lrange $L 0 4] -- [expr {$end-$start}] ne [expr {$ciend-$cipos+1}]"
			puts $L
                	set test "notOK"
		}
        }
}

puts $test
return $test





================================================
FILE: tests/AnnotSV/scripts/complete_KnotAnnotSV_YAML_test.tcl
================================================
#!/usr/bin/env tclsh

############################################################################################################
# AnnotSV web site                                                                                         #
#                                                                                                          #
# Auteur: Veronique Geoffroy (veronique.geoffroy@inserm.fr)                                                #
# Date: 2020/12/16                                                                                         #
############################################################################################################

proc WriteTextInFile {texte fichier} {
    set    fifi [open $fichier a]
    puts  $fifi $texte
    close $fifi
    return 1
}


# "./output/test.41_SV.annotated.tsv"
set AnnotSVoutput [lindex $argv 0]

# "/maison/geoffroy/knotAnnotSV/lgmgeoFork/knotAnnotSV/config_AnnotSV.yaml"
set yamlFile [lindex $argv 1]

# "./output/config_AnnotSV.tmp.yaml"
set yamlFileCompleted [lindex $argv 2]
file delete -force $yamlFileCompleted


set L_linesToWrite {}

# Look at the last POSITION used in the yamlFile
set lastPos 0
set f [open $yamlFile]
while {![eof $f]} {
    set L [gets $f]
    lappend L_linesToWrite $L
    if {[regexp "^ +POSITION: +(\[0-9\]+)" $L match pos]} {
	if {$pos > $lastPos} {set lastPos $pos}
    }
}

# Look at the user col name to add in "yamlFileCompleted"
set L_userColName {}
set f [open $AnnotSVoutput]
while {![eof $f]} {
    set L [gets $f]
    if {[regexp "^AnnotSV_ID" $L]} {
	if {![regsub "^.*SV_type\t" $L "" L]} {
	    regsub "^.*SV_length\t" $L "" L
	}
	regsub "Annotation_mode.*" $L "" L
	regsub "\t$" $L "" L
	set L_userColName [split $L "\t"]
	break
    }
}

# Complete the yamlFile (creation of yamlFileCompleted)
foreach col $L_userColName {
    incr lastPos
    lappend L_linesToWrite "${col}: # additional user column"
    lappend L_linesToWrite "    POSITION: $lastPos"
    lappend L_linesToWrite ""
}
WriteTextInFile [join $L_linesToWrite "\n"] $yamlFileCompleted




================================================
FILE: tests/AnnotSV/scripts/cutWithColumnNames.tcl
================================================
#!/usr/bin/env tclsh

## Command line example:
## /maison/geoffroy/Tcl/cutWithColumnNames.tcl test.annotated.tsv "SV type;Samples_ID;AnnotSV ranking"


proc ContentFromFile {{Fichier ""}} {
    if {[string equal $Fichier ""]} {return ""}
    set f     [open $Fichier r]
    set Texte [read -nonewline $f]
    close $f
    return $Texte
}

proc LinesFromFile {{Fichier ""}} {
    return [split [ContentFromFile $Fichier] "\n"]
}


#############
### INPUT ###
#############
# Fichier d'output d'AnnotSV :
set annotatedSVfileToParse [lindex $argv 0]
# Liste du nom des colonnes à afficher, séparées par des ";" (ET sans espace !)
set columnNames [lindex $argv 1]
set L_colNames [split $columnNames ";"]


# 1 - Cherche les numéros des colonnes à afficher 
# 2 - Affiche les infos dans les colonnes spécifiées en input
##############################################################
foreach L [LinesFromFile $annotatedSVfileToParse] {
	set Ls [split $L "\t"]
	if {[regexp "^## " $L]} {continue}

	# header
	if {[regexp "^AnnotSV_ID|^AnnotSV ID|^#|^gene|^variantID" $L]} {
		set lengthHeader [llength $Ls]
		set L_i {}
		set L_colOk {}
		foreach col $L_colNames {
			set i [lsearch $Ls "$col"] 
			if {$i ne -1} {	
				lappend L_i $i
				lappend L_colOk $col
			}
		}
		if {$L_colOk eq ""} {puts "No column to display";exit}
		puts "[join $L_colOk "\t"]"
		continue
	}

	# annotations
	if {[llength $Ls] ne $lengthHeader} {
		puts "different lengths of lines ([llength $L] ne $lengthHeader)"
	}
	foreach i $L_i {
		puts -nonewline "[lindex $Ls $i]\t"
	}
	puts ""

}




================================================
FILE: tests/AnnotSV/test_01_configfile/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}


# - Check that users can select only a subset of the annotation columns provided by AnnotSV by using the $ANNOTSV/etc/AnnotSV/configfile
#   => decrease the number of output annotation column
# - Check that no column is shifted by using the configfile



# Run of AnnotSV, asking for the minimum of annotation columns (Using a "configfile" located in the same directory as the input file)
mkdir -p ./output
cp $ANNOTSV/etc/AnnotSV/configfile.minAnnotation ./input/configfile
rm -f "./output/test_minAnn_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -svtBEDcol 5  -SVinputInfo 1 -outputFile "./output/test_minAnn_tcl.annotated.tsv" -genomeBuild GRCh37
rm ./input/configfile

minAnn=`head -1 ./output/test_minAnn_tcl.annotated.tsv | wc -w`
nLinesForMinAnn=`wc -l ./output/test_minAnn_tcl.annotated.tsv | awk '{print $1}'`


# Run of AnnotSV, with all annotation columns asked
rm -f "./output/test_allAnn_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -svtBEDcol 5  -SVinputInfo 1 -outputFile "./output/test_allAnn_tcl.annotated.tsv" -genomeBuild GRCh37

allAnn=`head -1 "./output/test_allAnn_tcl.annotated.tsv" | wc -w`
nLinesForAllAnn=`wc -l "./output/test_allAnn_tcl.annotated.tsv" | awk '{print $1}'`


if [ $nLinesForMinAnn != $nLinesForAllAnn ] 
then
	echo "error 1: not the same number of lines in both .tsv files"
	exit 1
fi

if [[ $minAnn > 74 ]]
then
        echo "error 1: too much annotation columns ($minAnn)"
        exit 1
fi

if [ $minAnn -ge $allAnn ]
then
        echo "error 1: minimum of annotation columns not respected"
        exit 1
fi



# Check that no column is shifted
for v in `$cut "./output/test_minAnn_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "error1: some columns semms to be shifted"
                exit 1
        fi
done


echo "ok - Finished"




================================================
FILE: tests/AnnotSV/test_01_configfile/input/test.bed
================================================
#chrom	start	end	tutu	SV type
1	2902537	3529849	ii	DEL


================================================
FILE: tests/AnnotSV/test_02_HG00096/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}

##################################################################################################
#####################      HG00096 (1000g)      ##################################################
##################################################################################################


# -SVinputFile:
###############
#         HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed
#         HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.vcf
#         => 4752 SV


# Check that no column is shifted
#################################
# The "ACMG_class" column must only contain:
# 1
# 3
# 4
# 5
# ACMG_class
# full=1
# full=3
# full=4
# full=5
# full=NA
# NA

SVinputBEDfile="./input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed"
SVinputVCFfile="./input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.vcf"



mkdir -p ./output
rm -f ./output/HG00096_tcl_*annotated.tsv


# SVinputFile = BED
$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputBEDfile -svtBEDcol 4 -SVinputInfo 1 -outputFile "./output/HG00096_tcl_1.annotated.tsv" -genomeBuild GRCh37 
for v in `$cut "./output/HG00096_tcl_1.annotated.tsv" "ACMG_class" | sort -u`
do
	if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
	then
    		echo "Error with SVinputFile = BED"
        	echo "error 1"
        	exit 1
	fi
done

# SVinputFile = VCF
$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputVCFfile -SVinputInfo 1 -outputFile "./output/HG00096_tcl_2.annotated.tsv" -genomeBuild GRCh37
for v in `$cut "./output/HG00096_tcl_2.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with SVinputFile = VCF"
                echo "error 1"
                exit 1
        fi
done

# SVinputFile = zipped VCF
gzip $SVinputVCFfile
$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputVCFfile.gz -SVinputInfo 1 -outputFile "./output/HG00096_tcl_3.annotated.tsv" -genomeBuild GRCh37 
for v in `$cut "./output/HG00096_tcl_3.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with SVinputFile = zipped VCF"
                echo "error 1"
                exit 1
        fi
done
gunzip $SVinputVCFfile.gz
 
# -SVinputInfo 0
$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputBEDfile -svtBEDcol 4 -SVinputInfo 0 -outputFile "./output/HG00096_tcl_4.annotated.tsv" -genomeBuild GRCh37
for v in `$cut "./output/HG00096_tcl_4.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with -SVinputInfo 0"
                echo "error 1"
                exit 1
        fi
done

# -metrics fr
$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputBEDfile -svtBEDcol 4 -outputFile "./output/HG00096_tcl_5.annotated.tsv" -metrics fr -genomeBuild GRCh37 
for v in `$cut "./output/HG00096_tcl_5.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with -metrics fr"
                echo "error 1"
                exit 1
        fi
done

 
# -reciprocal 1
$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputBEDfile -svtBEDcol 4 -SVinputInfo 1 -reciprocal 1 -outputFile "./output/HG00096_tcl_6.annotated.tsv" -genomeBuild GRCh37
for v in `$cut "./output/HG00096_tcl_6.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with -reciprocal 1"
                echo "error 1"
                exit 1
        fi
done



echo "ok - Finished"




================================================
FILE: tests/AnnotSV/test_02_HG00096/command_python.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/data/scripts/cutWithColumnNames.tcl"
SVinputBEDfile="./input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed"
SVinputVCFfile="./input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.vcf"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}


# SVinputFile = BED
pipenv run annotsv --SVinputFile $SVinputBEDfile --svtBEDcol 4 --SVinputInfo 1 --outputFile ./output/HG00096_python_1.annotated.tsv --genomeBuild GRCh37
for v in `$cut ./output/HG00096_python_1.annotated.tsv "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with SVinputFile = BED"
                echo "error 1"
                exit 1
        fi
done

# SVinputFile = VCF
pipenv run annotsv --SVinputFile $SVinputVCFfile --SVinputInfo 1 --outputFile ./output/HG00096_python_2.annotated.tsv --genomeBuild GRCh37
for v in `$cut ./output/HG00096_python_2.annotated.tsv "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with SVinputFile = VCF"
                echo "error 1"
                exit 1
        fi
done

# SVinputFile = zipped VCF
gzip $SVinputVCFfile
pipenv run annotsv --SVinputFile $SVinputVCFfile.gz --SVinputInfo 1 --outputFile ./output/HG00096_python_3.annotated.tsv --genomeBuild GRCh37
for v in `$cut ./output/HG00096_python_3.annotated.tsv "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with SVinputFile = zipped VCF"
                echo "error 1"
                exit 1
        fi
done
gunzip $SVinputVCFfile.gz

# -SVinputInfo 0
pipenv run annotsv --SVinputFile $SVinputBEDfile --svtBEDcol 4 --SVinputInfo 0 --outputFile ./output/HG00096_python_4.annotated.tsv --genomeBuild GRCh37
for v in `$cut ./output/HG00096_python_4.annotated.tsv "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with -SVinputInfo 0"
                echo "error 1"
                exit 1
        fi
done

# -metrics fr
pipenv run annotsv --SVinputFile $SVinputBEDfile --svtBEDcol 4 --outputFile ./output/HG00096_python_5.annotated.tsv --metrics fr --genomeBuild GRCh37
for v in `$cut ./output/HG00096_python_5.annotated.tsv "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with -metrics fr"
                echo "error 1"
                exit 1
        fi
done


# -reciprocal 1
pipenv run annotsv --SVinputFile $SVinputBEDfile --svtBEDcol 4 --SVinputInfo 1 --reciprocal 1 --outputFile ./output/HG00096_python_6.annotated.tsv --genomeBuild GRCh37
for v in `$cut ./output/HG00096_python_6.annotated.tsv "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with -reciprocal 1"
                echo "error 1"
                exit 1
        fi
done


echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_02_HG00096/input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed
================================================
chrom	start	end	svtype
1	3995268	3995269	ALU;TSD=null
1	4204667	4204717	DEL
1	6434482	6445321	DEL
1	6438160	6445897	DEL
1	7570074	7571521	DEL
1	8200707	8211256	DUP
1	10482499	10483790	DEL
1	11682873	11683189	DEL
1	17026064	17052112	CNV
1	17208619	17225378	CNV
1	17238417	17266696	CNV
1	17263114	17273513	CNV
1	17676165	17677662	DEL
1	17684764	17685086	DEL_ALU
1	20864015	20864732	DEL
1	21786418	21786695	DEL
1	23981142	23981143	ALU;TSD=AACAGATGGGGCATC
1	25592642	25661222	CNV
1	25688926	25700415	CNV
1	27804112	27804441	DEL_ALU
1	30298152	30298204	DEL
1	35101427	35111985	DEL
1	35627104	35627431	DEL
1	36733282	36733515	DEL
1	36749217	36749269	DEL
1	37215810	37215811	ALU;TSD=AAAAAATTAAATTTA
1	37816478	37816722	DEL
1	43857455	43857791	DEL_ALU
1	44059290	44059950	INV
1	44208924	44208925	ALU;TSD=AAAACAGAGCCCCC
1	46366107	46366436	DEL_ALU
1	49549776	49549830	DEL
1	50912662	50912663	ALU;TSD=CCCTAATAATTTTC
1	56887702	56888019	DEL_ALU
1	58071869	58071870	ALU;TSD=TTTTCCGGTATTTTT
1	58343211	58343535	DEL_ALU
1	58743910	58744826	DEL
1	60046725	60050638	DEL
1	60048628	60049655	DEL
1	62113386	62119528	DEL
1	62390586	62390935	DEL_ALU
1	62654739	62657162	DEL
1	63151819	63152158	DEL_ALU
1	64958078	64958079	ALU;TSD=CCCCCTATTGTTTTCTT
1	65909622	65909892	DEL_LINE1
1	68007970	68008811	DEL
1	69806992	69807311	DEL_ALU
1	69943715	69944021	DEL_ALU
1	70027325	70027682	DEL_ALU
1	70061670	70061671	ALU;TSD=ATAAAGTAGCTTGTG
1	70946189	70946520	DEL_ALU
1	71148798	71149047	DEL
1	71741319	71741629	DEL_ALU
1	72755694	72764095	DEL
1	72766343	72811815	DEL
1	72778537	72784594	DEL
1	74312425	74312678	DEL
1	74471655	74471656	ALU;TSD=AAAAATTTAGTCTC
1	75192907	75192908	LINE1;TSD=CCGTATTAGTTCATTTTC
1	78649157	78654148	DEL
1	79331208	79331209	ALU;TSD=TGAGCATATTTTC
1	79582082	79582083	ALU;TSD=GATTTTT
1	80299106	80299107	ALU;TSD=GCATTGTTTT
1	81194341	81194668	DEL_ALU
1	83042644	83042964	DEL_ALU
1	84517858	84524770	DEL_LINE1
1	85620127	85620128	ALU;TSD=TCT
1	85980461	86006144	CNV
1	86405790	86406118	DEL_ALU
1	86740980	86741697	DEL_LINE1
1	89475930	89478613	DEL
1	91624771	91625054	DEL_ALU
1	92232051	92233331	DEL
1	93167530	93167531	ALU;TSD=TATGTTATTTT
1	93498232	93498233	ALU;TSD=AGATTCCTTTTTCTAATTCT
1	100551660	100551661	ALU;TSD=AAATTAATACAAATGAG
1	100994221	100994222	ALU;TSD=AAAATTTCATG
1	105255038	105256195	DEL
1	105667567	105668446	DEL
1	106015797	106023398	DEL
1	110187159	110191392	DEL
1	110225019	110245280	DEL
1	110230075	110241247	CNV
1	112074694	112074805	DEL
1	112691740	112704718	DEL
1	112834896	112837824	DEL
1	112992009	112992010	ALU;TSD=CCAGACACGTTATTT
1	113799625	113800089	DEL
1	118091036	118091258	DEL_ALU
1	119080704	119080705	ALU;TSD=GCAACCAGCTTTT
1	143984622	144094733	CNV
1	144468090	144480623	DEL
1	144691202	144710622	CNV
1	144839080	144849492	CNV
1	144862244	144892802	CNV
1	144913699	144951391	CNV
1	144973077	144989257	DUP
1	145120320	145182150	CNV
1	146081807	146164363	CNV
1	148832244	148954132	CNV
1	149015523	149036627	CNV
1	149218121	149218122	ALU;TSD=null
1	149231192	149241216	CNV
1	149249429	149284877	CNV
1	149289438	149358445	CNV
1	149532289	149572952	DEL
1	150037842	150037898	DEL_ALU
1	152760084	152770547	DEL
1	153133703	153133960	DEL
1	153252216	153252217	LINE1;TSD=TGTCA
1	157540655	157540871	DEL
1	157887236	157887845	INV
1	158489615	158491973	DEL
1	158867540	158869980	DEL
1	158961353	158966208	DEL
1	159648708	159649659	DEL
1	162052665	162052985	DEL_ALU
1	162761322	162761323	ALU;TSD=CATTTGGCATTTTT
1	163314443	163314444	ALU;TSD=AGAAGTGGGTAG
1	165659306	165659307	ALU;TSD=AA
1	165731209	165731489	DEL
1	169225213	169245324	DEL
1	170964063	170964064	ALU;TSD=AAGATTATAGCCCAGACC
1	171358314	171358315	ALU;TSD=CAAAAGTTTTACTCTTT
1	171783587	171783649	DEL
1	174333015	174333016	ALU;TSD=TGTCAAACCATTCTT
1	175071066	175077094	CNV
1	178495321	178495683	DEL
1	178948185	178948186	ALU;TSD=AAAGAAAATCGCTT
1	179491966	179491967	ALU;TSD=ATATCCTAATT
1	180183831	180184150	DEL_ALU
1	180292989	180293313	DEL_ALU
1	180857564	180857565	ALU;TSD=TAAAATTGAGATAGC
1	187464747	187466829	DEL
1	187716053	187722514	DEL
1	188186464	188186465	ALU;TSD=CCCGGGTAAGTTAAACATTTTTT
1	188539457	188540228	DEL
1	188994948	188995283	DEL_ALU
1	189247039	189247040	ALU;TSD=AAAAAATATTCA
1	190837319	190837490	DEL
1	190874469	190874470	ALU;TSD=GGGCTGAAAACTCTTTATATTTGTGTTT
1	192609798	192609864	DEL
1	194451056	194454312	DEL
1	194517604	194517863	DEL
1	194675140	194675141	ALU;TSD=AAAATTGAGTATATC
1	197894025	197894310	DEL
1	198003599	198007023	DEL
1	199110049	199113807	DEL
1	205178526	205178807	INV
1	207292375	207292595	DEL
1	207292405	207293149	DEL
1	207542027	207545525	CNV
1	209935335	209936076	DEL
1	210078053	210085978	DEL
1	211965009	211965782	DEL
1	212471179	212472619	DEL
1	213002037	213013756	DEL
1	213083966	213086597	DEL
1	217024868	217024869	ALU;TSD=AAAAAGAGGCCAGAG
1	217457929	217458372	DEL
1	217754074	217754377	DEL_ALU
1	217913513	217913514	ALU;TSD=GGCCTTTCTTCTT
1	218245628	218246489	DEL_LINE1
1	219574692	219574693	ALU;TSD=GCCTTTTCTTTTTTT
1	222374169	222380531	DEL
1	225996433	225996434	ALU;TSD=AAGAGTAACGAAT
1	228024093	228024405	DEL_ALU
1	228959933	228959934	ALU;TSD=CTTTGTATAGTTTTT
1	231085161	231085162	ALU;TSD=AAAAAAAAAAA
1	232458585	232460249	DEL
1	232587774	232587775	ALU;TSD=AAAAATGTGGCATT
1	232836575	232836759	DEL
1	233962115	233963557	DEL
1	234805728	234805729	ALU;TSD=TGATTATATGTTTTCT
1	236548998	236551425	DEL
1	236594925	236595250	DEL_ALU
1	237569208	237569209	ALU;TSD=GAAAAAACTTTCTT
1	239780157	239780158	ALU;TSD=AAAAATATTCCA
1	240134858	240134859	ALU;TSD=null
1	240616990	240617314	DEL_ALU
1	241149856	241150181	DEL_ALU
1	241360537	241360852	DEL_ALU
1	241586225	241586489	DEL
1	243127774	243129222	DEL
1	243782747	243783759	DEL
1	246167282	246167379	DEL
1	248839443	248841018	DEL
2	296361	296424	DEL
2	2539950	2539951	ALU;TSD=TCAGCGGGTATTTTTT
2	2798774	2799246	DEL
2	3718461	3718462	ALU;TSD=AGAAGG
2	5562912	5562913	ALU;TSD=AAAAAATTCTGAGTGGT
2	6693415	6707844	DEL
2	9959221	9959571	DEL_ALU
2	11426375	11426376	ALU;TSD=TAAGCAGATGTTTTT
2	15163766	15163767	ALU;TSD=AAGATTATATCTT
2	15166285	15166611	DEL_ALU
2	15519553	15519554	ALU;TSD=AAGAAGCTGATGGA
2	16271567	16273799	DEL
2	17585118	17590610	DEL
2	18306417	18306418	ALU;TSD=AAGAAAGGAAAAAAT
2	20666665	20666972	DEL_ALU
2	23191016	23191017	LINE1;TSD=CCTGAGACTGGGTAATTTAT
2	26623683	26623684	ALU;TSD=GGAAGAACTGATTTT
2	27527254	27527255	ALU;TSD=null
2	28353920	28354247	DEL_ALU
2	28661665	28661718	DEL
2	28720773	28721321	DEL
2	31559696	31559697	ALU;TSD=AAAAAGAGAAAGCCCC
2	31952210	31952211	ALU;TSD=AAAAAGTAGAATGG
2	33091742	33091743	LINE1;TSD=null
2	33764554	33765272	INV
2	34255392	34255393	ALU;TSD=CCATTCACAGTTCT
2	34523576	34525669	DEL
2	34643630	34643937	DEL_ALU
2	34965683	34967221	DEL
2	35975766	35997215	DEL
2	36955660	36955976	DEL_ALU
2	38956737	38974142	DUP
2	39071477	39071819	DEL_ALU
2	39315339	39315340	ALU;TSD=ATCAGTGGTTCTT
2	40446946	40447073	DEL
2	40613688	40613689	ALU;TSD=AAAAAAGAGATAATG
2	41775944	41781288	DEL
2	41973027	41976041	DEL
2	43024076	43024077	ALU;TSD=CATTTTTTC
2	46196199	46196200	ALU;TSD=AAAATATTCATTGAT
2	46910132	46910448	DEL_ALU
2	46928953	46928954	ALU;TSD=TTT
2	47319298	47319299	ALU;TSD=GCATTTTCTAATTTTTCT
2	48276534	48276535	ALU;TSD=AGAAATTCAAATGCA
2	48990526	48991166	DEL
2	49612882	49613205	DEL_ALU
2	50602644	50602645	ALU;TSD=AATTCTGAAGCTCTT
2	51469239	51469240	ALU;TSD=AAAATCATAAATTTT
2	51926595	51927817	DEL
2	52749687	52785269	DEL
2	54565490	54567478	DEL
2	56652306	56655874	DEL
2	56850110	56850433	DEL_ALU
2	57247962	57247963	ALU;TSD=GTATGTCTTCTTTT
2	59644944	59644994	DEL
2	59874277	59874278	ALU;TSD=AACAGAAAAATAACTACAAGGG
2	62457099	62457426	DEL_ALU
2	62501912	62501913	ALU;TSD=AGCTATACATTCTT
2	64694288	64705094	DEL
2	65807507	65807817	DEL_ALU
2	66505568	66507543	DEL
2	66658991	66658992	ALU;TSD=AGAAAACAAAAGAA
2	70125033	70125561	DEL
2	70797718	70797719	ALU;TSD=CCCTCCTTCTAATTCTATT
2	72244731	72244732	ALU;TSD=null
2	72440495	72441373	INV
2	75387903	75387904	ALU;TSD=AAGACATAACCGA
2	76257717	76257718	ALU;TSD=TTTCACCTATTTGCATATTCTTTTTTT
2	79057647	79057983	DEL_ALU
2	82340445	82340765	DEL_ALU
2	84590146	84590147	ALU;TSD=CAATAGACCCATCTC
2	84728755	84728756	ALU;TSD=AAAAGTTTGGTAAA
2	84758440	84758733	DEL_ALU
2	88320968	88321215	DEL_ALU
2	89132270	89155860	DEL
2	91865750	91925129	CNV
2	97854287	97856138	DEL
2	98136216	98156567	CNV
2	99752964	99753300	DEL_ALU
2	100103689	100105021	DEL
2	101975203	101975536	DEL_ALU
2	106452585	106452586	ALU;TSD=GGATTTCCTTTTCTTTGTT
2	106694799	106696035	DEL
2	106695055	106695893	DEL
2	106695492	106695752	DEL
2	106880209	106885796	CNV
2	106930527	106930629	DEL
2	111576391	111576633	DEL
2	112447436	112447437	ALU;TSD=CCCAAATGATTTTC
2	112453948	112453949	ALU;TSD=GAGAGATTTATTTT
2	114106446	114106447	ALU;TSD=AAGAAATCAGAAAA
2	114151313	114153614	DEL
2	115628104	115628838	DEL
2	116662058	116662652	DEL
2	117334924	117335240	DEL_ALU
2	117893050	117893389	DEL_ALU
2	118906129	118906281	DEL_ALU
2	121797802	121798397	DEL
2	122056855	122058006	DEL
2	122623755	122623809	DEL
2	123330661	123330662	ALU;TSD=AAGAAAAATCCACTGA
2	123364885	123365367	DEL
2	123476599	123482503	INV
2	123477289	123482545	DEL
2	124054928	124054929	ALU;TSD=GAGCTTTATTTTT
2	126368481	126370218	DEL
2	126443247	126451831	DEL
2	126641642	126641643	ALU;TSD=AAGAAACTATT
2	127674757	127677270	DEL
2	131423474	131426399	DEL
2	131424936	131428361	DEL
2	131463320	131475704	DEL
2	132335225	132335331	DEL_ALU
2	139380788	139380789	ALU;TSD=AACAACAGCTCTG
2	143434605	143434943	DEL_ALU
2	144010793	144010794	LINE1;TSD=AAAAAGTTTGATGGA
2	145346767	145346768	ALU;TSD=AATAAATATTTACAA
2	146842402	146842549	DEL
2	146862622	146876866	DEL
2	146868295	146876318	DEL
2	147020933	147020934	LINE1;TSD=AGAAATACT
2	148650072	148650073	ALU;TSD=AACTTTTTT
2	150759300	150759621	DEL_ALU
2	151903083	151903359	DEL_ALU
2	152041204	152041492	DEL
2	153153401	153153488	DEL
2	154064575	154064678	DEL
2	154160685	154160686	ALU;TSD=CACTGTTCTGTTTTT
2	154494940	154495150	DEL
2	156750284	156750369	DEL
2	156833715	156835494	DEL
2	158433337	158433666	DEL_ALU
2	158719085	158719396	DEL_ALU
2	159285147	159285148	ALU;TSD=AAAAAGTCAGGAAACA
2	159661933	159662894	DEL
2	159958908	159961502	DEL
2	160855851	160856174	DEL_ALU
2	161795600	161795924	DEL_ALU
2	161952337	161952338	ALU;TSD=AAAAAAAAAAAAAAAATAGGC
2	162332269	162334045	DEL
2	163666408	163666723	DEL_ALU
2	163678631	163678632	ALU;TSD=AAATTTTACATTTT
2	167545980	167547056	DEL
2	167550210	167550286	DEL
2	169395462	169395774	DEL_ALU
2	169606131	169606207	DEL
2	173522171	173522172	ALU;TSD=TCGATACTGCTTTT
2	175090625	175090945	DEL_ALU
2	177265639	177272040	DEL
2	178287642	178288052	DEL
2	178351472	178351473	ALU;TSD=CTATATGTATATTTTTAT
2	178648956	178648957	ALU;TSD=AAACAGGATGTGGTA
2	181000555	181000556	LINE1;TSD=AGAAAATATAGGTCTC
2	181925827	181926149	DEL_ALU
2	182262200	182262201	ALU;TSD=AACAAGAAGGAATACAGAG
2	182355971	182356286	DEL_ALU
2	183315806	183316121	DEL_ALU
2	183354710	183354784	DEL
2	188215718	188216025	DEL_ALU
2	189119663	189120979	DEL
2	189959434	189959435	ALU;TSD=AAGAAACATACCA
2	191635470	191635523	DEL
2	191680779	191680874	DEL
2	193355404	193355708	DEL_ALU
2	194689469	194698782	DEL
2	195477627	195477734	DEL_ALU
2	196031309	196031614	DEL_ALU
2	196051814	196052084	DEL_LINE1
2	196214818	196215228	DEL
2	198758284	198761579	CNV
2	198894512	198894649	DEL
2	199779914	199779915	LINE1;TSD=AGAAAGTATATAATCT
2	200312454	200312679	DEL
2	202721648	202721969	DEL_ALU
2	206113734	206121786	DEL
2	206128030	206129895	DEL
2	206731182	206731505	DEL_ALU
2	208910336	208910651	DEL_ALU
2	208959107	208959450	DEL_ALU
2	209061157	209061477	DEL_ALU
2	209451717	209452044	DEL_ALU
2	212161556	212161620	DEL
2	212551245	212551542	DEL_ALU
2	214775204	214775511	DEL_ALU
2	214778297	214778363	DEL
2	215201641	215201642	ALU;TSD=AAAGACTAAG
2	215728762	215730832	DEL
2	216548435	216548436	ALU;TSD=AAAAAATCAGTAAATTC
2	217158346	217158727	DEL
2	218265091	218265092	ALU;TSD=AAGACTGGTGG
2	220052322	220052915	DEL
2	220052751	220056378	DEL
2	221503768	221503769	LINE1;TSD=ATCAACATGTTCATTTCTT
2	221568789	221572221	DEL
2	223481690	223481979	DEL_ALU
2	223797358	223797675	DEL_ALU
2	225292994	225293946	DEL
2	227017557	227017806	DEL_ALU
2	237701915	237701977	DEL
2	238553978	238559216	DEL
2	240958939	240959261	DEL_ALU
2	241125050	241125406	DEL
3	228934	234185	CNV
3	571750	572075	DEL_ALU
3	1629482	1629541	DEL
3	2311586	2311934	DEL_ALU
3	2962004	2962005	ALU;TSD=AGAAGGAGGCTGGAT
3	6103050	6103051	ALU;TSD=CCAGGATGGAATCTTT
3	6525411	6525412	ALU;TSD=TGGCCTTCTTTTTT
3	6650202	6654630	DEL
3	6700872	6701254	DEL
3	7130385	7130386	ALU;TSD=CACTGATTTCTTATT
3	7538755	7538756	ALU;TSD=AAGATTTACC
3	8325606	8326807	DEL
3	10397456	10397805	DEL_ALU
3	11645651	11646732	DEL
3	12196517	12196572	DEL
3	12818468	12818469	ALU;TSD=GGGGCTGTTGTTTATT
3	13681157	13682269	DEL
3	16239410	16241213	DEL
3	17948538	17948858	DEL_ALU
3	19035452	19035453	ALU;TSD=AAAACCAAGGTCAT
3	20919491	20919766	DEL
3	21457497	21457820	DEL_ALU
3	23764057	23764387	DEL_ALU
3	25030880	25032246	DEL
3	25278459	25278460	ALU;TSD=TCCTGTTTCTTT
3	26123847	26123975	DEL
3	26432727	26439290	CNV
3	26469887	26469982	DEL
3	26524464	26524465	LINE1;TSD=AAATAGCCACGTTTTTCT
3	29550384	29550385	ALU;TSD=TAATGATCGCCATTCT
3	31856630	31856688	DEL
3	32102050	32107887	DEL
3	32203861	32204143	DEL_ALU
3	32940758	32940854	DEL
3	35051657	35051985	DEL_ALU
3	35709332	35709431	DEL
3	36108120	36108438	DEL_ALU
3	37361602	37361603	ALU;TSD=null
3	38399708	38399709	ALU;TSD=AAAAGTTTGGT
3	39260355	39260421	DEL
3	40241622	40241623	ALU;TSD=TACATTTTCTTTTT
3	45542662	45542663	ALU;TSD=TGGAATTTTT
3	45768351	45768676	DEL_ALU
3	48957701	48959056	DEL
3	49494276	49494605	DEL_ALU
3	50123658	50124725	DEL
3	50879175	50879176	ALU;TSD=TATTGTTACCTTTTCT
3	53027106	53038920	DEL
3	55788580	55788581	LINE1;TSD=AAATATGAATTTA
3	56604704	56604961	DEL
3	59852903	59852904	LINE1;TSD=AATAATCAGCAGAACCA
3	61475048	61475371	DEL_ALU
3	61666415	61666685	DEL
3	63540965	63540966	ALU;TSD=AGAAAAATACTTCCT
3	66951653	66951654	ALU;TSD=TGATTTTGTTGATCTTTT
3	68634740	68640254	DEL
3	68739655	68747879	DEL
3	70415105	70415440	DEL_ALU
3	73063077	73063554	DEL
3	74765412	74765735	DEL_ALU
3	75367119	75367200	DEL
3	75423550	75458952	CNV
3	75423612	75642120	DEL
3	75495797	75527865	CNV
3	75532164	75569195	CNV
3	75597940	75615947	CNV
3	76222309	76222310	ALU;TSD=AAAATTCTTTGA
3	76985883	76985884	ALU;TSD=AAGAATTCATTTT
3	80062916	80064350	DEL
3	80964882	80964883	ALU;TSD=AAAATTT
3	81346065	81346380	DEL_ALU
3	81907492	81907812	DEL_ALU
3	83304066	83304067	ALU;TSD=A
3	84104923	84107402	DEL
3	84404171	84404243	DEL
3	85576571	85576572	LINE1;TSD=AAAACAAAGAAAGAAAAAATTCTGTGG
3	86213403	86213720	DEL
3	87482522	87482606	DEL
3	88453730	88454008	DEL
3	95116192	95116522	DEL_ALU
3	95465681	95470805	DEL
3	95465761	95468120	DEL
3	95874517	95874518	ALU;TSD=AAGAAATGC
3	98410648	98414803	DEL
3	98899063	98902396	DEL
3	98982423	98982496	DEL
3	99037445	99037757	DEL_ALU
3	99605060	99605113	DEL
3	99628781	99629631	DEL
3	99785350	99785656	DEL_ALU
3	101357527	101359730	DEL
3	103453396	103453397	ALU;TSD=GAGTAAAATTCTTTTT
3	104278168	104279030	DEL
3	104645425	104645596	DEL
3	106813625	106813789	DEL
3	110271029	110271030	ALU;TSD=AAAATTCTTTA
3	111226375	111226376	ALU;TSD=AAAAATAAAATCA
3	111243593	111248855	DEL
3	112466720	112466721	SVA;TSD=GAGGGAGAGACATATTTTTCTTCCTTTT
3	112467382	112467712	DEL_ALU
3	113854021	113854347	DEL_ALU
3	114466474	114466798	DEL_ALU
3	116204836	116205180	DEL
3	116275271	116275595	DEL_ALU
3	118281607	118281829	DEL
3	119419835	119420548	DEL
3	119419882	119420336	DEL
3	119893984	119894448	DEL
3	122138442	122138768	DEL_ALU
3	123236746	123237061	DEL_ALU
3	124808631	124808632	ALU;TSD=TC
3	124936320	124937213	DEL
3	125672301	125676371	DEL
3	126090202	126090203	SVA;TSD=AGAAGGAGCTGTCTT
3	126358922	126359249	DEL_ALU
3	128672140	128675334	DEL
3	129938434	129938435	ALU;TSD=AAATAAAGAATGAATGGGAGC
3	131708252	131713384	DEL
3	131989128	131994876	CNV
3	134673902	134674555	DEL
3	139425868	139425926	DEL
3	144687884	144687885	ALU;TSD=TGGTTTGTAATTTATT
3	144693110	144693236	DEL
3	144888422	144888910	DEL
3	145069463	145069464	ALU;TSD=AAAAATAATGTCACTGT
3	146385228	146390409	DEL
3	148566792	148567110	DEL_ALU
3	148844372	148844700	DEL_ALU
3	151503209	151503269	DEL
3	151748850	151748851	ALU;TSD=AAGAATAGCTTAACATG
3	152053972	152053973	ALU;TSD=AAAAATGTAATCTG
3	156092162	156093688	DEL
3	158350719	158351910	DEL
3	159257018	159257691	DEL
3	159428985	159429184	DEL_ALU
3	161246712	161247047	DEL_ALU
3	162408296	162408612	DEL_ALU
3	162512202	162525833	DEL
3	162514471	162625647	DEL
3	162525834	162545193	DEL
3	162558858	162601552	DEL
3	162764905	162769085	DEL
3	163464167	163464473	DEL_ALU
3	166362314	166362315	ALU;TSD=AAAAAGGGGG
3	168199075	168199076	ALU;TSD=CATGCCTGACTCT
3	168738458	168738838	DEL
3	169474323	169474324	ALU;TSD=AAGACTTGAGG
3	173268419	173268477	DEL
3	177381336	177385447	DEL
3	177896496	177896554	DEL
3	178550124	178550897	DEL
3	178567629	178568339	DEL
3	179654342	179654808	DEL
3	180091672	180091673	LINE1;TSD=null
3	183876797	183877385	DEL
3	185017328	185017653	DEL_ALU
3	186826655	186826969	DEL_ALU
3	188304831	188305164	DEL_ALU
3	189575894	189576216	DEL_ALU
3	189737175	189740648	DEL
3	189955408	189955709	DEL_ALU
3	190290639	190290936	DEL_ALU
3	190478458	190478634	DEL
3	190999464	190999465	ALU;TSD=TGTACTCTATTTTC
3	191064690	191071659	DEL
3	191856085	191856423	DEL_ALU
3	191889929	191891307	DEL
3	192045380	192045381	ALU;TSD=null
3	192875329	192885405	DEL
3	194398762	194400296	DEL
3	195417835	195445776	CNV
3	195452012	195457240	CNV
3	195457317	195471062	DEL
3	195505831	195507123	DEL
3	195569206	195569923	DEL
3	195680898	195693668	CNV
3	195773919	195774981	DEL
3	196055919	196056883	DEL
4	401039	401369	DEL_ALU
4	6651592	6652912	DEL
4	6897351	6900401	DEL
4	7569173	7569174	ALU;TSD=CTGGTCAGGTGTTTTTT
4	7635491	7635854	DEL
4	7750915	7750916	ALU;TSD=null
4	9157568	9214307	DEL
4	9186956	9206735	DEL
4	9457406	9481022	CNV
4	9573062	9573170	DEL
4	9576978	9577452	DEL
4	9603244	9603245	SVA;TSD=AAGTTC
4	9704849	9704850	SVA;TSD=AAGAAAATCACCATAAATCAGA
4	10211223	10234580	DEL
4	12239264	12239265	ALU;TSD=null
4	16426943	16426999	DEL
4	16917031	16917489	INV
4	17202756	17203066	DEL_ALU
4	19643112	19643453	DEL_ALU
4	22432891	22432952	DEL
4	23721664	23721985	DEL_ALU
4	26438630	26438631	ALU;TSD=TGCTAACATTCTT
4	28320770	28320771	ALU;TSD=AACAAAAAAAAGTAGACAA
4	28421593	28421942	DEL
4	29661109	29661437	DEL_ALU
4	29907839	29907840	ALU;TSD=GACATGTAATATTTTT
4	35240260	35244433	DEL
4	36469904	36470237	DEL_ALU
4	36652565	36652676	DEL
4	36780614	36780937	DEL_ALU
4	37483080	37483138	DEL
4	38264296	38265498	DEL
4	39031076	39031358	DEL_ALU
4	40024928	40026278	DEL
4	40235048	40237039	INV
4	41068089	41068205	DEL
4	42762647	42769523	DEL
4	43399986	43399987	ALU;TSD=GAAATTTAAGCTA
4	43751813	43752122	DEL
4	43931499	43931838	DEL
4	44507275	44507729	DEL_LINE1
4	44509377	44509695	DEL_ALU
4	44971996	44972168	DEL
4	46202797	46205026	DEL
4	54415654	54415655	ALU;TSD=AAGAGATGTGG
4	55482419	55482740	DEL_ALU
4	55808674	55808918	DEL_ALU
4	55998554	55998888	DEL_ALU
4	57501858	57501984	DEL
4	58087336	58087734	DEL_LINE1
4	58148016	58148342	DEL_ALU
4	59348231	59348282	DEL
4	59985387	59985494	DEL
4	61330102	61333188	DEL
4	61569228	61569558	DEL_ALU
4	61939189	61942243	DEL
4	63668999	63676240	DEL
4	63670474	63671759	DEL
4	64563186	64563187	ALU;TSD=AAGAAAAAACTGTGTG
4	65216746	65216747	ALU;TSD=AAAAAGTG
4	66641109	66641420	DEL_LINE1
4	67106616	67106617	ALU;TSD=AGAAAGATTAAGATTTGC
4	67754010	67754011	ALU;TSD=AAATAGACTCTTT
4	67963892	67963893	ALU;TSD=TCCTTACAACTTTT
4	68873177	68873246	DEL
4	69959841	69960165	DEL_ALU
4	71926412	71926572	DEL_ALU
4	72829626	72829955	DEL_ALU
4	73418754	73418842	DEL
4	73831245	73831819	DEL
4	78199221	78199273	DEL
4	78236274	78236540	DEL_LINE1
4	79159515	79159516	ALU;TSD=TAAAAAAGCT
4	80205728	80206056	DEL_ALU
4	80360637	80362723	DEL
4	81302526	81302865	DEL_ALU
4	81991515	81991836	DEL_ALU
4	82630148	82630149	ALU;TSD=AAAATATCAGACTTCA
4	84221708	84221993	DEL_ALU
4	86470382	86470383	ALU;TSD=AAGAAATTGCCA
4	86584502	86584503	ALU;TSD=AAGAATGCTTGTG
4	87066353	87066535	DEL_ALU
4	88032137	88032469	DEL_ALU
4	88775635	88775952	DEL_ALU
4	89681460	89681782	DEL_ALU
4	91931556	91935838	DEL
4	91931666	91933538	DEL
4	91933849	91936097	DEL
4	93393064	93393384	DEL_ALU
4	94439081	94439177	DEL
4	95498964	95499280	DEL_ALU
4	96382454	96382660	DEL
4	98110644	98110970	DEL_ALU
4	98133375	98133689	DEL_ALU
4	98181261	98181582	DEL_ALU
4	98354318	98359087	CNV
4	98590652	98590970	DEL_ALU
4	100023042	100023377	DEL_ALU
4	100070288	100070604	DEL_ALU
4	101244846	101245110	DEL_ALU
4	101293066	101293136	DEL
4	101390634	101390812	DEL
4	102712356	102712409	DEL
4	102787786	102788351	DEL_LINE1
4	104894032	104894690	DEL
4	106507402	106507403	ALU;TSD=AAGAAATGCAAACA
4	106636862	106636863	ALU;TSD=AAAATATTAAAGA
4	107437718	107438504	DEL
4	107840622	107840967	DEL
4	111383200	111383532	DEL_ALU
4	111516319	111516509	DEL
4	113348500	113348562	DEL
4	113469974	113470281	DEL_ALU
4	115549930	115549931	ALU;TSD=AAGAAAG
4	115624597	115624870	DEL_ALU
4	115743887	115744132	DEL
4	115928726	115931880	DEL
4	117251478	117251795	DEL_ALU
4	119125417	119130206	DEL
4	119296342	119296678	DEL_ALU
4	119774736	119774737	ALU;TSD=CTCTAGTTTAGAACTTTTCT
4	120017235	120017555	DEL_ALU
4	120639904	120639905	ALU;TSD=AAACACCTTCA
4	120865434	120866627	DEL
4	121407647	121407970	DEL_ALU
4	121582257	121582258	ALU;TSD=TACTGCTTGTCTT
4	121808929	121809246	DEL_ALU
4	125867361	125867690	DEL_ALU
4	130062076	130069013	DEL
4	130066189	130068435	DEL
4	130590920	130591211	DEL_ALU
4	131611192	131611360	DEL
4	131694825	131695074	DEL_ALU
4	133180785	133182979	DEL
4	133619876	133620182	DEL_ALU
4	133819597	133819920	DEL_ALU
4	134295543	134295863	DEL_ALU
4	134596423	134596424	LINE1;TSD=A
4	135433008	135435698	DEL
4	138091987	138100624	DEL
4	138177334	138177335	LINE1;TSD=AAGAAAGCTA
4	138299005	138299006	ALU;TSD=AAGAATAATGTTACCA
4	138966189	138967210	DEL
4	141497059	141497126	DEL
4	142230774	142233063	DEL
4	143029543	143029600	DEL
4	145316454	145319900	DEL
4	146438780	146440426	DEL
4	147225296	147225297	LINE1;TSD=AAGAAGTTAAAATAG
4	148053950	148053951	ALU;TSD=AAGAGTAAAGCT
4	150161039	150161381	DEL_ALU
4	150951027	150951349	DEL_ALU
4	152340705	152341552	DEL_LINE1
4	157002032	157002343	DEL_ALU
4	160670214	160670328	DEL
4	162053240	162053669	DEL
4	162053282	162053551	DEL
4	162381498	162381664	DEL
4	162449273	162451675	DEL
4	162776133	162776210	DEL
4	163394004	163396424	DEL
4	164501940	164502253	DEL_ALU
4	166002564	166005042	DEL
4	167004317	167004917	DEL
4	167669354	167670581	DEL
4	168806478	168806590	DEL
4	170278462	170278879	DEL
4	172374434	172379470	DEL
4	172988631	172992933	DEL
4	173176433	173176487	DEL
4	173425034	173433521	DEL
4	174044228	174044229	ALU;TSD=TATTACTGCTTTTT
4	174149455	174149456	ALU;TSD=CTTCTAGTCATTTCT
4	178156827	178157156	DEL_ALU
4	180063822	180064151	DEL
4	180097876	180098507	DEL
4	180256972	180256973	ALU;TSD=TAAATCAAATTTCTTATT
4	180600174	180600258	DEL
4	181317271	181317454	DEL_ALU
4	181503039	181503040	ALU;TSD=AATGCTTATTTTT
4	181549428	181549742	DEL_ALU
4	182056564	182057129	DEL
4	183570005	183571998	DEL
4	184303686	184304009	DEL_ALU
4	185665771	185666089	DEL_ALU
4	185977809	185977810	ALU;TSD=CTGAATTTT
4	186382160	186382161	ALU;TSD=GGTAGTCACGTTTT
4	186441632	186444075	DEL
4	187093487	187093488	ALU;TSD=null
4	187093487	187098252	DEL
4	187795697	187796017	DEL_ALU
4	188200037	188200038	ALU;TSD=AAAAAATCGC
4	188959366	188959488	DEL
4	189793239	189793558	DEL_ALU
4	189969676	189970030	DEL_ALU
4	190058006	190064283	DEL_LINE1
4	190105408	190106160	DEL
4	190253838	190254160	DEL_ALU
4	190291418	190291737	DEL_ALU
4	190302417	190302714	DEL
5	167619	167620	ALU;TSD=AAGGAGGTTGGGGG
5	608881	608931	DEL
5	1022803	1025877	DEL
5	1585517	1585518	ALU;TSD=AAGAGACCCTCTCTA
5	1627140	1628837	DEL
5	1812652	1812653	ALU;TSD=GACTCCTCTTTT
5	1924587	1925201	DEL
5	3995199	3995200	ALU;TSD=AGAAAACGACAGAAATC
5	4459411	4459482	DEL
5	5595248	5595249	ALU;TSD=GACTTTTT
5	7221928	7222248	DEL_ALU
5	8749528	8749529	LINE1;TSD=AAAATTTTTTAATG
5	9411760	9412074	DEL_ALU
5	10273288	10275414	DEL
5	10574959	10575294	DEL
5	10756185	10756522	DEL
5	13399958	13400032	DEL
5	16525366	16525419	DEL
5	17712622	17712623	ALU;TSD=AGAAAAATATACACAAG
5	18643248	18648493	DEL
5	21651568	21651891	DEL_ALU
5	23903003	23905242	DEL
5	24452839	24453161	DEL_ALU
5	25653044	25653266	DEL
5	25777306	25777630	DEL_ALU
5	26111186	26111512	DEL_ALU
5	31677424	31677745	DEL_ALU
5	32338582	32338584	INS
5	32762578	32762579	ALU;TSD=TGTTTCCTGATTTTTT
5	33355563	33355894	DEL_ALU
5	33633348	33633349	LINE1;TSD=GAAAAGTCTTCTTT
5	34113270	34113271	ALU;TSD=AAAATATTTAAAGTTTCTG
5	35196137	35196187	DEL
5	35614173	35614486	DEL_ALU
5	35672335	35672394	DEL
5	37293799	37294130	DEL_ALU
5	40181658	40181659	ALU;TSD=AACACTTTT
5	42628418	42631130	DEL
5	43516480	43516549	DEL
5	44125522	44125712	DEL
5	46144216	46145986	DEL
5	49480966	49482003	DEL
5	53176928	53177233	DEL_ALU
5	53755531	53755619	DEL
5	55429225	55430342	DEL
5	55870781	55871076	DEL
5	55927980	55927981	ALU;TSD=AAAAGATACAGAGA
5	57320371	57338133	DEL
5	57323407	57333752	DEL
5	57923170	57923343	DEL_ALU
5	58274026	58274160	DEL
5	58277277	58277329	DEL
5	60001696	60003676	DEL
5	62687444	62687711	DEL
5	62704438	62704761	DEL_ALU
5	65346041	65346371	DEL_ALU
5	68105932	68106026	DEL
5	70368390	70391629	DEL
5	73648985	73649303	DEL_ALU
5	75082293	75082602	DEL_ALU
5	75435663	75435781	DEL_ALU
5	77048345	77048681	DEL_ALU
5	77062308	77062618	DEL_ALU
5	78276748	78277072	DEL_ALU
5	78277726	78278045	DEL_ALU
5	78426567	78426568	SVA;TSD=AGGAATCATGGTGAAGCC
5	80039371	80039680	DEL_ALU
5	80751142	80751471	DEL_ALU
5	81008164	81008437	DEL_ALU
5	81182479	81182821	DEL_ALU
5	82156716	82157031	DEL_ALU
5	82906058	82906377	DEL_ALU
5	83948134	83955051	DEL
5	84814477	84814554	DEL
5	85405341	85405510	DEL
5	86246008	86247146	DEL
5	86372695	86372696	ALU;TSD=AAAGAAAATATTT
5	87328660	87328807	DEL
5	88032012	88032342	DEL_ALU
5	89450781	89450782	LINE1;TSD=GAAAGATGCTTAC
5	90499767	90502128	DEL
5	95343311	95343665	DEL_ALU
5	95909715	95910061	DEL_ALU
5	96325017	96325116	DEL
5	96866423	96866424	LINE1;TSD=AAAAAATACATTTTTAG
5	97035240	97035573	DEL
5	98345117	98347479	DEL
5	98839884	98842906	DEL
5	99174314	99174628	DEL_ALU
5	99759460	99759778	DEL_ALU
5	99923533	99923838	DEL_ALU
5	100497396	100497397	ALU;TSD=null
5	101693791	101694719	DEL
5	102163354	102163607	DEL_ALU
5	103738436	103738437	ALU;TSD=AAAGTTAAAGTTAATTTT
5	104877052	104877141	DEL
5	106324752	106326434	DEL
5	110694944	110695264	DEL
5	112477737	112478297	DEL
5	113459037	113459360	DEL_ALU
5	114731312	114731630	DEL_ALU
5	114969401	114969875	DEL
5	115130457	115130806	DEL
5	115894136	115894457	DEL_ALU
5	116428182	116428500	DEL_ALU
5	119015144	119015464	DEL_ALU
5	119380174	119382671	DEL
5	121059232	121060007	DEL
5	122274354	122274677	DEL_ALU
5	122723707	122723763	DEL
5	122976151	122976152	ALU;TSD=AAAAAAACAAGGAA
5	123963235	123963291	DEL
5	124363835	124364161	DEL_ALU
5	124484339	124484391	DEL
5	126458368	126458811	DEL
5	127172319	127173286	DEL
5	127172367	127172679	DEL
5	127407440	127410918	DEL
5	128314869	128314870	ALU;TSD=AAGAAGTCACTTTTG
5	130853258	130853259	ALU;TSD=AAAAAATCTCTCAAATG
5	132934098	132934099	LINE1;TSD=AAGAGGTGCTGGC
5	135115148	135120700	DEL
5	136851113	136857394	DEL
5	136854589	136856557	DEL
5	140554408	140558942	CNV
5	142935366	142935678	DEL_ALU
5	144059460	144059732	INV
5	146369626	146369627	ALU;TSD=AAAACCATAAAACA
5	146380181	146380256	DEL
5	146622654	146623087	DEL
5	147462155	147462471	DEL_ALU
5	147552866	147554617	INV
5	148385841	148385940	DEL
5	148401433	148401591	DEL
5	150210002	150210129	DEL
5	150789783	150792627	DEL
5	151760910	151761223	DEL_ALU
5	152529738	152529739	ALU;TSD=TCAACACAGTATTTTT
5	154315917	154316002	DEL
5	155290624	155290625	ALU;TSD=AACAAAGAAAATTC
5	155311785	155312580	DEL
5	158592397	158592742	DEL_ALU
5	159742556	159742662	DEL
5	160431305	160431636	DEL_ALU
5	164366297	164366607	DEL_ALU
5	166294129	166294321	DEL
5	167299359	167299582	DEL
5	168394430	168394743	DEL_ALU
5	168742523	168742757	DEL_ALU
5	168911933	168911934	ALU;TSD=AAAGAG
5	169597462	169598751	INV
5	170158817	170158906	DEL_ALU
5	171893746	171893747	ALU;TSD=TCCCCAGATTTCT
5	172973014	172974746	DEL
5	175353978	175371353	DUP
5	177199170	177205310	DEL
5	177405751	177406551	DEL
5	180375655	180420806	CNV
6	256502	293373	CNV
6	305181	340601	CNV
6	327586	368712	CNV
6	380338	380414	DEL
6	666377	667821	DEL
6	1682791	1683102	DEL_ALU
6	2568176	2571941	DEL
6	2605520	2605580	DEL
6	2774017	2774018	ALU;TSD=AAAGAATCAATTAT
6	4050241	4050560	DEL_ALU
6	5898451	5898882	DEL
6	6068837	6069178	DEL_ALU
6	6277340	6277602	DEL_ALU
6	7717367	7717702	DEL_ALU
6	8337673	8341524	DEL
6	9014816	9014924	DEL_ALU
6	9460377	9460714	DEL_ALU
6	10070792	10071105	DEL_ALU
6	10264425	10265263	DEL
6	10293995	10294140	DEL
6	11556091	11556411	DEL_ALU
6	11903436	11903748	DEL_ALU
6	13191033	13191034	LINE1;TSD=AGAATTCAAAATACAAGG
6	13882549	13883852	DEL
6	14745282	14745689	DEL
6	15666751	15667661	DEL
6	17376702	17381506	DEL
6	17416398	17416399	ALU;TSD=GAGAAAACTCTTTT
6	17472269	17472582	DEL_ALU
6	18346399	18346400	ALU;TSD=AGCTTAGGATTATT
6	18402112	18402924	DEL
6	18402131	18402447	DEL
6	18943635	18943685	DEL
6	19155631	19155966	DEL_ALU
6	20259856	20259909	DEL
6	20765366	20765686	DEL_ALU
6	22227472	22227754	DEL_ALU
6	23685987	23686315	DEL_ALU
6	23978361	23978362	ALU;TSD=AAAAATGACAACCATGCC
6	24811806	24818032	DEL_LINE1
6	25529870	25530011	DEL_ALU
6	26678936	26686491	CNV
6	26739614	26748928	CNV
6	28190195	28190532	DEL_ALU
6	29363897	29364040	DEL_ALU
6	29843522	29849190	DEL
6	29899944	29901525	DEL
6	29998496	29998497	ALU;TSD=AAAAAAACTTCTTTC
6	30207801	30208224	DEL
6	30230519	30230591	DEL
6	30886430	30886570	DEL
6	31292091	31293878	DEL
6	32313768	32314091	DEL_ALU
6	32454946	32478407	DEL
6	32461337	32468848	DEL
6	32494142	32494484	DEL
6	32499300	32500806	DEL
6	32512660	32513019	DEL
6	32514808	32516265	DEL
6	32571334	32571609	DEL_ALU
6	32604936	32616132	CNV
6	32614932	32615252	DEL
6	32623533	32624604	DEL
6	32624896	32625863	DEL
6	32676558	32677026	DEL
6	32778682	32779821	DEL
6	33026721	33028605	DEL
6	33030313	33030314	SVA;TSD=CTCTTTTTCTT
6	33093407	33093738	DEL_ALU
6	33583080	33585984	DEL
6	34699946	34701100	DEL
6	35626431	35629746	DEL
6	35649830	35649911	DEL
6	35754684	35766728	CNV
6	38071246	38071300	DEL
6	38498278	38498415	DEL
6	38922187	38922502	DEL_ALU
6	41953350	41953665	DEL_ALU
6	47312788	47312789	ALU;TSD=AAATAAAGAGCCCCTGC
6	47564668	47566948	DEL
6	48286295	48286349	DEL
6	50765956	50766267	DEL_ALU
6	51300093	51300094	ALU;TSD=AATAATTTATATTTTC
6	51517349	51517675	DEL_ALU
6	51736109	51736805	DEL
6	51929672	51929673	ALU;TSD=null
6	52691458	52691459	ALU;TSD=null
6	53648758	53648759	ALU;TSD=AAAAGGCATATAAA
6	53928702	53934820	DEL
6	54556435	54556770	DEL_ALU
6	54846372	54851449	DEL
6	57268496	57297686	CNV
6	57450653	57479094	CNV
6	57733728	57733824	DEL
6	62924290	62929121	DEL
6	63597637	63598983	DEL
6	64666468	64668402	DEL
6	64667011	64668349	DEL
6	65006421	65006515	DEL
6	65710974	65715701	DEL
6	66163982	66163983	ALU;TSD=CTATTTTTCATTTTTT
6	66260136	66262101	DEL
6	67009228	67049033	DEL
6	67024956	67027285	DEL
6	67040806	67043182	DEL
6	68311311	68311312	ALU;TSD=TTTTTGCCAGTATTTT
6	68314068	68314069	ALU;TSD=TGATTTGGTATATACATTT
6	70190684	70192285	DEL
6	72863591	72873663	DEL
6	73221994	73222816	DEL
6	74156152	74156478	DEL_ALU
6	74421253	74421559	DEL_ALU
6	74504855	74504856	ALU;TSD=AAGATTTAGTTTTTCTGG
6	74591999	74602382	CNV
6	74613607	74620405	DEL
6	74832472	74833461	DEL
6	74932705	74933071	DEL
6	74932723	74932945	DEL
6	77097464	77102643	DEL
6	77437459	77453275	CNV
6	77449470	77452760	DEL
6	77980649	77980650	LINE1;TSD=null
6	79723801	79723802	ALU;TSD=TACAAACCTTATTTCTT
6	80086769	80086770	ALU;TSD=AAAGTCAAAGTTTTATTCTTTCTT
6	80609906	80609977	DEL
6	81283720	81293577	DEL
6	83094623	83094675	DEL
6	86026352	86026667	DEL_ALU
6	86144298	86144632	DEL_ALU
6	87678642	87678643	ALU;TSD=TCACTTATGATTTTTT
6	88118173	88118306	DEL
6	88651308	88651380	DEL
6	88698077	88698078	ALU;TSD=GGGCCCCTTTCTT
6	89921713	89922144	DEL
6	91125879	91125880	ALU;TSD=CTAAAATATTATTGTGTAGTTATTCTT
6	91237575	91237896	DEL_ALU
6	94397505	94397566	DEL
6	94930783	94930784	ALU;TSD=TCCAACTCTCTTTT
6	95193325	95194337	DEL
6	95335622	95335927	DEL_ALU
6	96009421	96009422	ALU;TSD=ATGTCTACTTCTTTCT
6	97017683	97017684	ALU;TSD=GTGAGTTTCTTTT
6	98251340	98251341	ALU;TSD=TAGACCATTTCT
6	100034558	100035368	DEL
6	104183184	104183509	DEL_ALU
6	105567837	105568172	DEL_ALU
6	106983622	106983941	DEL_ALU
6	108266112	108266415	DEL_ALU
6	110102982	110102983	ALU;TSD=AGATTT
6	114223973	114225052	DEL
6	116844156	116844157	ALU;TSD=AAAATGTGGATTGCTG
6	118626162	118626163	ALU;TSD=AGTCAAAGATCTTT
6	120380266	120380267	ALU;TSD=CCCTGCTCTTGTT
6	121319292	121319616	DEL_ALU
6	122301643	122301962	DEL_ALU
6	123515058	123515373	DEL_ALU
6	124498906	124499229	DEL_ALU
6	125421421	125421422	ALU;TSD=AAAAAAAA
6	126468009	126468247	DEL
6	129737070	129737384	DEL_ALU
6	131113279	131113280	ALU;TSD=AAAATCTCAAGGCC
6	131273499	131273500	ALU;TSD=AAAATGTTCACTAAAG
6	131418012	131418980	DEL
6	132697628	132697951	DEL_ALU
6	132707465	132712439	DEL
6	133371487	133371831	DEL_ALU
6	134268952	134269719	DEL
6	137313691	137314188	DEL
6	141325707	141326033	DEL_ALU
6	141548586	141550030	DEL
6	145818662	145818760	DEL
6	148506314	148506448	DEL
6	149632778	149632944	DEL
6	151485895	151486930	DEL
6	153408248	153408307	DEL
6	153429856	153429857	SVA;TSD=AGAAAATTCCCCTACATTCC
6	153633385	153633386	ALU;TSD=TTTTTCTCTGCCTTCT
6	154446915	154447237	DEL_ALU
6	154463239	154463330	DEL
6	154686517	154686793	DEL_ALU
6	154882352	154882470	DEL
6	158548266	158549066	DEL_SVA
6	158876076	158876404	DEL_ALU
6	159204431	159204432	ALU;TSD=AAAAAGTTTCCT
6	160086252	160088699	DEL
6	161274256	161274633	DEL
6	161684136	161684238	DEL
6	162583796	162586803	DEL
6	162852220	162852293	DEL
6	163814230	163814231	ALU;TSD=AAAAGATGAGGTCTC
6	165186931	165186932	ALU;TSD=TC
6	167928592	167928701	DEL
6	170038118	170038445	DEL_ALU
6	170206128	170206410	DEL
6	170465430	170465493	DEL
6	170500768	170500769	ALU;TSD=CAACAATAAAATATTC
7	904330	904386	DEL
7	1185070	1187665	DEL
7	1898671	1898738	DEL
7	4158162	4160313	DEL
7	7583520	7584968	DEL
7	8463553	8465548	DEL
7	8698628	8698847	DEL
7	10504231	10506240	DEL
7	10834757	10834879	DEL
7	13649223	13649224	ALU;TSD=CTATATCAGACCTCTT
7	13663189	13663455	DEL_ALU
7	14451264	14451430	DEL
7	14680853	14680933	DEL
7	14910419	14910737	DEL_ALU
7	16171771	16174073	DEL
7	16936287	16936626	DEL_ALU
7	17969699	17969765	DEL
7	22434787	22436761	DEL
7	24038171	24040063	DEL
7	25044601	25044930	DEL_ALU
7	28214282	28214660	DEL
7	28574294	28575147	DEL
7	29476917	29477227	DEL_ALU
7	32286850	32287119	DEL
7	32811206	32811259	DEL
7	33712013	33712074	DEL
7	33898841	33899172	DEL_ALU
7	34492801	34492802	ALU;TSD=AGAATTCTAGGGCT
7	36878879	36878968	DEL
7	37836651	37836652	ALU;TSD=TGCTCCCCTCTCTTT
7	38116201	38116202	ALU;TSD=CTTTGTCTTATTTTT
7	39380342	39380407	DEL
7	39387270	39387889	DEL
7	40879271	40880479	INV
7	42549700	42550022	DEL_ALU
7	47089458	47092817	DEL
7	47219078	47219174	DEL
7	47551089	47551090	ALU;TSD=CTTAAATATTTTA
7	49057624	49057625	ALU;TSD=GCCTGTAGCTTGGTTCT
7	49725896	49725897	LINE1;TSD=null
7	50104763	50106067	DEL
7	51081675	51081733	DEL
7	51594315	51598689	DEL
7	52094962	52095275	DEL_ALU
7	52107107	52107424	DEL_ALU
7	52520168	52520372	DEL
7	53652516	53652517	LINE1;TSD=TTATTTGTTTTTTTA
7	56244918	56244919	ALU;TSD=AAAAGTAATCATCAC
7	56435784	56438107	DEL
7	57164992	57173720	DEL
7	57957715	57959407	DEL
7	61510866	61515334	DEL
7	61971096	61975635	DEL
7	62002293	62004875	DEL
7	62366086	62369684	DEL
7	64413378	64414031	DEL
7	65589712	65591959	DEL
7	66755275	66756602	DEL
7	67113327	67113452	DEL
7	68462070	68462389	DEL_ALU
7	70188702	70188703	LINE1;TSD=GTAGCTCTGCTCTTATTTATGTATTTT
7	71211920	71212966	DEL
7	72270263	72275846	DEL
7	73549765	73550955	DEL
7	73828493	73831271	DEL
7	74772350	74774220	DEL
7	76144788	76157013	CNV
7	76567224	76567225	ALU;TSD=TGGCTATTTCTT
7	76702227	76708169	DEL
7	76870544	76870797	DEL
7	79742076	79742408	DEL_ALU
7	81358341	81358609	DEL
7	81728727	81729064	DEL_ALU
7	83050175	83051201	DEL
7	84901725	84901726	LINE1;TSD=TT
7	88091299	88091749	DEL_LINE1
7	89598872	89599188	DEL_ALU
7	90022137	90022454	DEL_ALU
7	90583932	90584239	DEL_ALU
7	91214111	91220934	DEL
7	93416961	93422984	DEL_LINE1
7	93541824	93542540	DEL
7	94877512	94877513	ALU;TSD=TAAAAATATATTTT
7	95386253	95386584	DEL_ALU
7	96067512	96067827	DEL_ALU
7	96543286	96546589	DEL
7	99146666	99146667	ALU;TSD=GCCTGG
7	100327576	100340737	DEL
7	101059153	101060267	DEL
7	101334195	101334515	DEL_ALU
7	102366705	102374343	DEL
7	103874937	103875244	DEL_ALU
7	104129515	104129796	DEL_ALU
7	104187384	104187715	DEL_ALU
7	104204602	104204768	DEL
7	107464069	107464744	DEL
7	107818074	107818166	DEL
7	107829263	107829264	LINE1;TSD=TAAATTTTAGTGGAA
7	108352846	108353171	DEL_ALU
7	108501444	108501545	DEL
7	109283352	109283353	ALU;TSD=AAAAGACCATTAGT
7	109436701	109453942	DEL
7	110181927	110188432	DEL
7	110484750	110484751	LINE1;TSD=null
7	111065333	111067265	DEL
7	114956601	114956602	ALU;TSD=GTAAAATGACTTTT
7	118083314	118083315	ALU;TSD=AAAAATAATTCCT
7	118831254	118834745	DEL
7	119558047	119558048	ALU;TSD=TTCTATGTATAT
7	126045887	126051450	DEL
7	126775610	126775700	DEL_ALU
7	127766414	127766728	DEL_ALU
7	127929333	127929334	ALU;TSD=ATGGCCACTATTCTT
7	129157179	129157180	ALU;TSD=AGAAAGTGGGAGAGAAGG
7	133785003	133798330	DEL
7	134424656	134424657	ALU;TSD=CATAATTTTATTCTT
7	138322188	138322252	DEL
7	138742268	138742585	DEL_ALU
7	140189249	140190276	DEL
7	141113863	141114182	DEL_ALU
7	143543598	143560593	CNV
7	144382749	144382897	DEL
7	144770375	144775211	DEL
7	145063221	145063384	DEL_LINE1
7	148063001	148063081	DEL
7	148072910	148076327	DEL
7	148818174	148818486	DEL_ALU
7	149847612	149849125	DEL
7	152245349	152246306	DEL
7	152419399	152419715	DEL_ALU
7	152574795	152580352	DEL
7	152708457	152708846	DEL
7	153310127	153310817	DEL
7	153529763	153529833	DEL
7	153966050	153966051	ALU;TSD=AAAAATGCCCATCT
7	154858220	154858221	ALU;TSD=GTAACATAAGCTTT
7	154941915	154942244	DEL_ALU
7	155139370	155140881	DEL
7	155140316	155141440	DEL
7	155652238	155652328	DEL
7	157734829	157734885	DEL
7	157825833	157825892	DEL
7	158029473	158030453	DEL
7	158046568	158047317	DEL
7	158500754	158504852	DEL
8	594395	599417	DEL
8	597104	598344	DEL
8	1071684	1071746	DEL
8	1836099	1838287	DEL
8	2122088	2122354	DEL
8	2132773	2270819	CNV
8	2250563	2266528	DEL
8	2778563	2778787	DEL
8	3994862	3995320	DEL
8	4122887	4124965	DEL
8	4222049	4222389	DEL_ALU
8	4941223	4941520	DEL_ALU
8	5748176	5748505	DEL_ALU
8	5829282	5829283	LINE1;TSD=GTTTTCT
8	6587829	6588150	DEL_ALU
8	6991759	6995386	CNV
8	7212582	7227421	CNV
8	7355293	7364762	DEL
8	7774146	7782327	CNV
8	8072609	8077628	CNV
8	8245067	8245143	DEL
8	8920127	8920128	ALU;TSD=AAGAAGGGGACGG
8	9665673	9665674	ALU;TSD=AGAAGATCTTCACTGGC
8	9807901	9807902	ALU;TSD=AAAAGAGTCTG
8	11245530	11247217	DEL
8	12389850	12428478	CNV
8	13594464	13594628	DEL_ALU
8	13778059	13778385	DEL_ALU
8	15001266	15001586	DEL_ALU
8	15053390	15053705	DEL_ALU
8	15387290	15387593	DEL_ALU
8	15401664	15414791	DEL
8	16102822	16102823	ALU;TSD=CATATTATGGATTCTT
8	16821865	16822240	DEL
8	16984984	16985045	DEL
8	23447840	23447890	DEL
8	24972437	24990950	DEL
8	25066682	25070659	DEL
8	25172660	25172661	ALU;TSD=ATATTAAAATTCTT
8	25327221	25327278	DEL
8	26073403	26073404	ALU;TSD=CAAATCCCCATCATCTT
8	30392277	30392581	DEL_ALU
8	31571241	31571594	DEL_ALU
8	32679960	32691259	DEL
8	34022524	34022805	DEL
8	34166427	34166495	DEL
8	34947383	34947457	DEL
8	37050879	37051853	DEL
8	38864077	38864078	ALU;TSD=AAAAAGGTATCATAGTC
8	39195825	39389230	DEL
8	39232005	39287823	DEL
8	39303973	39308306	DEL
8	39306887	39312031	DEL
8	39311276	39321581	DEL
8	39737280	39737510	DEL
8	39765314	39765646	DEL_ALU
8	39976061	39976151	DEL
8	40469706	40470386	DEL
8	40774597	40779782	DEL
8	41270468	41270469	ALU;TSD=GACACATTTT
8	41279328	41279651	DEL_ALU
8	42190387	42194352	DEL
8	46991405	46992654	DEL
8	46991586	46992440	DEL
8	47405849	47407908	DEL
8	49045494	49045495	ALU;TSD=TTTAATAAAGTTTT
8	52737961	52738284	DEL_ALU
8	53895704	53897189	DEL
8	54204882	54205198	DEL_ALU
8	56401202	56401518	DEL_ALU
8	56658598	56658734	DEL
8	56676277	56676407	DEL
8	59078452	59078788	DEL_ALU
8	61204986	61205303	DEL_ALU
8	61945872	61946021	DEL
8	62169158	62169209	DEL
8	62930143	62930455	DEL_ALU
8	63034973	63040435	DEL
8	64144864	64145115	DEL_ALU
8	66311348	66311469	DEL
8	70357613	70357926	DEL_ALU
8	71914591	71914592	ALU;TSD=AAAATAAAAGCTA
8	72551405	72551739	DEL_ALU
8	74607596	74607683	DEL
8	74787761	74787858	DEL
8	74833794	74837515	DEL
8	75362835	75366959	DEL
8	75375346	75375347	ALU;TSD=AAGATTGATCCTC
8	76126888	76127212	DEL_ALU
8	76138134	76138191	DEL
8	81767595	81767596	ALU;TSD=AAAAAATCTTTGCTT
8	83351478	83351479	ALU;TSD=AAGAGTAAAAAGGTGG
8	84296948	84297096	DEL_ALU
8	84349766	84349839	DEL
8	84959372	84959555	DEL
8	85437274	85437275	ALU;TSD=CGGCCTCAATTTT
8	87315040	87315041	LINE1;TSD=null
8	89392207	89392514	DEL_ALU
8	91069173	91069495	DEL_ALU
8	92677086	92677087	ALU;TSD=AAAAAAATTAAAATA
8	96345249	96345387	DEL
8	97098073	97098425	DEL_ALU
8	98595392	98595731	DEL_ALU
8	98783448	98783780	DEL_ALU
8	100782579	100782580	ALU;TSD=null
8	105900483	105900484	ALU;TSD=ATATACTTGATTTCCT
8	106664522	106664523	ALU;TSD=AGCCCATTTTT
8	106670518	106670838	DEL_ALU
8	106703448	106703774	DEL_ALU
8	107207888	107207889	ALU;TSD=GACACTTTTT
8	107511093	107511418	DEL_ALU
8	108120234	108120557	DEL_ALU
8	109135936	109135937	SVA;TSD=AAAAGAATATTTATG
8	112294057	112297142	DEL
8	113225848	113226191	DEL_ALU
8	114862620	114862753	DEL
8	114934391	114934683	DEL
8	115079316	115080675	DEL
8	117047019	117047020	ALU;TSD=AATAAAGACATAACCAA
8	118223529	118223809	DEL_ALU
8	118712788	118713119	DEL_ALU
8	119165526	119165598	DEL
8	119447044	119447355	DEL_ALU
8	121681672	121681991	DEL_ALU
8	121854760	121855078	DEL_ALU
8	121930605	121930713	DEL
8	124680183	124680184	ALU;TSD=AAAAGAACTCAGGT
8	125889970	125889971	ALU;TSD=TTCTTCTGATCTT
8	127192196	127194569	DEL
8	129244941	129244942	ALU;TSD=TCCTTTCTCTTTT
8	129708036	129708037	ALU;TSD=AAAAAAAAAATCTGTGCC
8	132168283	132168596	DEL_ALU
8	132277657	132280535	DEL
8	137160271	137163814	CNV
8	138742943	138743864	DEL
8	138743347	138743803	DEL
8	138860548	138860872	DEL_ALU
8	139325979	139325980	ALU;TSD=AAGATACAAGCTAC
8	140014070	140014187	DEL
8	143494784	143495714	DEL
8	145234823	145234878	DEL
8	145503113	145503195	DEL
8	145645595	145647589	DEL
8	146042931	146043066	DEL
8	146057037	146057833	DEL
8	146192869	146193180	DEL
9	3780616	3780942	DEL_ALU
9	4346658	4346969	DEL_ALU
9	6700382	6709249	CNV
9	6701890	6702631	DEL
9	6708608	6710744	DEL
9	6999377	6999684	DEL_ALU
9	7371803	7372116	DEL_ALU
9	9950428	9950758	DEL_ALU
9	10404415	10405176	DEL
9	10404562	10405091	DEL
9	10498740	10499050	DEL_ALU
9	10828091	10828426	DEL_ALU
9	10908809	10909099	DEL_ALU
9	11329329	11329330	ALU;TSD=CAGATATTAATTTCTT
9	14877445	14877446	ALU;TSD=TGTTGTTTCTTT
9	15394880	15395196	DEL_ALU
9	15602580	15602666	DEL
9	15815277	15821947	DEL
9	17874425	17874426	ALU;TSD=null
9	18751826	18752116	DEL_ALU
9	21038453	21038454	ALU;TSD=null
9	21109534	21109535	ALU;TSD=GAAAAATATAT
9	21261949	21261950	ALU;TSD=AAAAAATGGT
9	22288724	22288725	ALU;TSD=GCCTGTGTTTCCTTTCT
9	22999487	22999819	DEL_ALU
9	23362812	23377678	DEL
9	23370987	23372431	DEL
9	28584919	28585011	DEL_ALU
9	28846309	28847978	DEL
9	28960619	28960620	ALU;TSD=AAGAAATATGTATAATTG
9	29624691	29625012	DEL_ALU
9	30491283	30491594	DEL_ALU
9	30674468	30674469	LINE1;TSD=CAACCAAGACAGTAAATTTTTTTTTT
9	31291353	31292673	DEL
9	32092742	32092743	LINE1;TSD=TT
9	33213068	33213929	DEL
9	33213125	33213403	DEL
9	36362880	36364079	DEL
9	36474157	36474999	DEL
9	38555824	38565194	DEL
9	40609334	40609335	ALU;TSD=AGAAAATGCCAGGATG
9	43392405	43404180	CNV
9	43450178	43463455	CNV
9	43495449	43520900	CNV
9	43580844	43606160	CNV
9	43612172	43623150	CNV
9	43652217	43676146	CNV
9	44235869	44252311	CNV
9	44255190	44276471	CNV
9	45700960	45715411	CNV
9	66478618	66478619	ALU;TSD=null
9	66497883	66537264	CNV
9	68354131	68388436	CNV
9	69794966	69839048	CNV
9	71665323	71665557	DEL_ALU
9	71738119	71743359	DEL
9	71777926	71778244	DEL_ALU
9	71804520	71804997	DEL
9	71895338	71896537	DEL
9	73463597	73463913	DEL_ALU
9	74544792	74544793	ALU;TSD=AAACTTAAAGATATCT
9	75669517	75669796	DEL_ALU
9	77524150	77524337	DEL
9	78736726	78737038	DEL_ALU
9	78895792	78895793	ALU;TSD=AAAAAAGAGA
9	83630437	83630750	DEL_ALU
9	85033845	85034187	DEL_ALU
9	87775183	87776183	DEL
9	87901405	87901712	DEL_ALU
9	89154576	89155912	DEL
9	89799093	89799407	DEL_ALU
9	91501994	91502058	DEL
9	92176048	92177979	DEL
9	95884696	95884756	DEL
9	96371386	96371387	ALU;TSD=TTAGTGGTTGTTTT
9	96730345	96730597	DEL_ALU
9	97292906	97293231	DEL_ALU
9	97314256	97314257	ALU;TSD=AAAAGAGAGCTCAAC
9	99062582	99062920	DEL
9	100761058	100761388	DEL_ALU
9	101309042	101311668	DEL
9	101347967	101348322	DEL
9	102849310	102849311	ALU;TSD=AAATAAAAAAAAAAACTTTG
9	104219699	104220378	DEL
9	104443961	104444727	DEL_LINE1
9	105162485	105162668	DEL
9	107708696	107708761	DEL
9	107798567	107803487	DEL
9	107816812	107817348	INV
9	109675911	109676565	DEL
9	112430200	112430515	DEL_ALU
9	113327089	113327090	ALU;TSD=AGAAGATTAATTATCTG
9	114333161	114333923	DEL
9	114653182	114653934	DEL
9	115937084	115937379	DEL_ALU
9	118109642	118109987	DEL_ALU
9	118509752	118509753	ALU;TSD=CCCTATGGCCTCATTTAACCTT
9	119477063	119477397	DEL_ALU
9	121371514	121371569	DEL
9	122531834	122532152	DEL_ALU
9	123055184	123055185	ALU;TSD=TCCTTTACTTTGTT
9	124411470	124411788	DEL
9	124642001	124642134	DEL
9	128980176	128980177	ALU;TSD=AAGAATCTCTCACCTT
9	131412056	131413976	DEL
9	134391120	134391175	DEL
9	135296997	135297073	DEL
9	135938579	135956026	CNV
9	136379210	136379552	DEL_ALU
9	136414101	136414425	DEL_ALU
9	136761039	136761267	DEL_SVA
9	138214060	138217603	DEL
9	138479100	138480204	DEL
9	138562333	138562389	DEL
9	140253527	140255973	DEL
10	1292107	1292108	ALU;TSD=AAAAATCCTATTGAAGG
10	1537791	1537898	DEL
10	2077560	2077561	ALU;TSD=AGAAATTTCAGCATTTTA
10	3083763	3083764	SVA;TSD=AAATGAAAAATGGT
10	3569025	3569026	ALU;TSD=AAAAATTCTGTGAACTT
10	4290058	4291690	DEL
10	4634801	4635120	DEL_ALU
10	4708523	4710520	DEL
10	6064768	6064841	DEL
10	6097370	6097868	DEL_SVA
10	7077041	7078303	DEL
10	7995834	7996925	DEL
10	9097749	9097799	DEL
10	9436189	9436251	DEL
10	9474855	9474856	ALU;TSD=TATTTTTTT
10	9510994	9510995	ALU;TSD=TGCAAATTTTTTT
10	10075348	10075398	DEL
10	10493409	10493732	DEL_ALU
10	12596183	12596570	DEL
10	14936348	14936665	DEL_ALU
10	15532464	15532774	DEL_ALU
10	18503073	18503589	DEL
10	19216666	19216667	LINE1;TSD=AAGAAGTGAGACATA
10	19397308	19397645	DEL_ALU
10	19504645	19504784	DEL
10	19996544	19998179	DEL
10	20667245	20667565	DEL_ALU
10	23635492	23635621	DEL
10	24376838	24378445	DEL
10	25707715	25707716	LINE1;TSD=GAAAATAATCTTTTGTTTGACTTATTTTT
10	26185093	26185161	DEL
10	26354751	26355068	DEL_ALU
10	26767941	26768247	DEL_ALU
10	26999005	27002143	DEL
10	27224091	27228168	DEL
10	27638254	27642097	DEL
10	29102541	29102542	ALU;TSD=CTAAATCATCTATT
10	29712145	29712720	DEL_LINE1
10	29883209	29883264	DEL
10	29918527	29918997	DEL
10	32705726	32706064	DEL_ALU
10	34684468	34684793	DEL_ALU
10	35593206	35593536	DEL_ALU
10	46262157	46305352	CNV
10	46551272	46693058	CNV
10	46976292	47023561	CNV
10	47007970	47086710	CNV
10	47089972	47150813	CNV
10	47383857	47395064	CNV
10	47531022	47599037	CNV
10	47596038	47634490	CNV
10	47645964	47697149	CNV
10	47894775	47999751	CNV
10	48419952	48419953	ALU;TSD=ATAAAATTT
10	48751829	48880554	CNV
10	49289919	49390675	CNV
10	49917156	49917479	DEL_ALU
10	50278015	50278332	DEL_ALU
10	51003249	51011181	DEL
10	51300882	51397654	CNV
10	51600129	51694240	CNV
10	54466942	54466943	ALU;TSD=AAAAGTGTCCTTTC
10	54805970	54805971	ALU;TSD=CACTTTCAAGAATTT
10	54860810	54861129	DEL_ALU
10	55983295	55983296	ALU;TSD=ACTTTTCCTTCTTTT
10	56664659	56664660	ALU;TSD=AAAAAAAACAAAAAGG
10	57702025	57702365	DEL_ALU
10	57974632	57974633	ALU;TSD=AATAAGAATTTTTTT
10	59256852	59258100	DEL
10	60984921	60984922	ALU;TSD=AAGAAATGAAAATAGAGG
10	61365481	61365800	DEL_ALU
10	62124858	62124859	ALU;TSD=AAAAAATAGATGCT
10	63743614	63743792	DEL_ALU
10	65509251	65511405	DEL
10	66837069	66837070	ALU;TSD=TCAATGAGTTTTTTT
10	67306908	67315294	DEL
10	68336769	68336770	ALU;TSD=CTTAACTTTTT
10	70234960	70234961	SVA;TSD=TTTTTGTTTGTTT
10	70272096	70272418	DEL_ALU
10	71314957	71315065	DEL
10	73256581	73256701	DEL
10	78255575	78261021	DEL
10	78800902	78801221	DEL_ALU
10	81188158	81188234	DEL
10	82904660	82904914	DEL
10	84237972	84238465	DEL_SVA
10	84400756	84400905	DEL_ALU
10	85522725	85523932	DEL
10	85626217	85626424	DEL_ALU
10	88666175	88666515	DEL_ALU
10	89079429	89114090	CNV
10	91547384	91547720	DEL_ALU
10	91809911	91810221	DEL_ALU
10	92969225	92969563	DEL_ALU
10	93633333	93634563	DEL
10	94134432	94137766	DEL
10	95545481	95546492	DEL
10	96251541	96251717	DEL
10	99034741	99037238	DEL
10	100025125	100025464	DEL
10	103394011	103395092	DEL
10	105817214	105817215	ALU;TSD=AAAAGATTGCCTCCTTC
10	106566893	106566894	ALU;TSD=GGACTGTTGCTTTT
10	107252997	107253348	DEL
10	107891561	107891562	ALU;TSD=GGAGCACACGTTTTT
10	107950652	107951600	DEL
10	108991284	108991285	ALU;TSD=GCATATTACACATTTT
10	112177753	112177754	LINE1;TSD=null
10	114073874	114073875	ALU;TSD=AAACAGAAATAAAATATTGAGTTTCTG
10	114112179	114116659	DEL
10	114157784	114158122	DEL_ALU
10	117711613	117711999	DEL
10	119219112	119219450	DEL_ALU
10	119634274	119634605	DEL_ALU
10	121046814	121046865	DEL
10	122226691	122228857	DEL
10	122701143	122701437	DEL
10	124216824	124217266	DEL
10	127190584	127197225	INV
10	128106472	128106786	DEL_ALU
10	128616069	128616070	ALU;TSD=null
10	129373595	129373596	ALU;TSD=GGGAATAACCTTTT
10	129565302	129565608	DEL_ALU
10	132372179	132372324	DEL
10	132858471	132858820	DEL_ALU
10	132988697	132991196	DEL
10	134136386	134364854	DUP
10	134151810	134179753	DUP
10	134183629	134212401	DUP
10	134217496	134217548	DEL
10	134265395	134300021	DUP
10	134317241	134362349	DUP
11	677313	677769	DEL
11	4907963	4907964	ALU;TSD=AAAAGACTTTATTTTT
11	4968456	4975835	CNV
11	4972926	4973837	DEL
11	5106964	5107211	DEL_ALU
11	5521609	5523196	DEL
11	5885149	5885150	ALU;TSD=AAGAGATTGTGTG
11	6881402	6881922	DEL
11	7092800	7092801	ALU;TSD=AAGAATGCAGGT
11	7428579	7428910	DEL_ALU
11	7716903	7717219	DEL_ALU
11	8326057	8326195	DEL_ALU
11	8839663	8839664	SVA;TSD=AAAAATACACAAACTAG
11	9323626	9324639	DEL
11	10292738	10293842	DEL
11	11948525	11948526	SVA;TSD=CAAGAGTGTGTTGTTTA
11	12152544	12152868	DEL_ALU
11	12943732	12944009	DEL_ALU
11	13092200	13092201	ALU;TSD=ATTAATGTAATTTTC
11	14348310	14348626	DEL_ALU
11	16587158	16587294	DEL_LINE1
11	16597563	16597886	DEL_ALU
11	16996173	16996599	DEL
11	19963012	19963013	ALU;TSD=AATAAATAGCATGAGGTTG
11	22412812	22412813	ALU;TSD=AAAAACATCTA
11	22433876	22433992	DEL
11	23012584	23012637	DEL
11	23313949	23314025	DEL
11	23522804	23522805	ALU;TSD=AATTGTAATTCATT
11	25068857	25068962	DEL
11	25605138	25605139	ALU;TSD=AAAAGGAACTTAGTT
11	25680026	25680080	DEL
11	26679948	26680047	DEL
11	27657262	27657596	DEL
11	29007143	29012766	DEL
11	29139370	29140327	DEL
11	29967582	29968470	DEL
11	31393768	31397650	DEL
11	32286640	32286973	DEL_ALU
11	37121329	37121391	DEL
11	37544637	37544638	ALU;TSD=AAAAATTTTGCTAATTA
11	37666630	37666937	DEL_ALU
11	37706295	37706296	ALU;TSD=null
11	37962045	37962370	DEL_ALU
11	38801075	38801076	ALU;TSD=AGAAAGTGGTTTATT
11	41007018	41007340	DEL_ALU
11	42464098	42464409	DEL_ALU
11	42812829	42818734	CNV
11	43191343	43191344	ALU;TSD=AAAGAATAATGTT
11	43891829	43892165	DEL_ALU
11	43909603	43909911	DEL
11	45429848	45431615	DEL
11	46036235	46036582	DEL_ALU
11	46161016	46162403	DEL
11	47057588	47063700	DEL
11	47579086	47579087	ALU;TSD=null
11	48120061	48120370	DEL_ALU
11	48600857	48604286	DEL
11	48680194	48680405	DEL
11	48714039	48715072	DEL
11	48734744	48736963	DEL
11	48880634	48881844	DEL
11	48928943	48929253	DEL
11	48933125	48933126	ALU;TSD=CTTCAGTCTAGATTTT
11	49282683	49282684	ALU;TSD=AATTTACATATCTTC
11	49425081	49425416	DEL_ALU
11	49655824	49655825	ALU;TSD=CAGGTGTGTGTTCTT
11	49883571	49883575	INS
11	50234630	50234680	DEL
11	50640269	50641124	DEL
11	51341174	51362976	DEL
11	51346696	51348982	DEL
11	51353224	51367675	CNV
11	51577840	51581765	DEL
11	54885396	54892290	DEL
11	56303363	56303364	ALU;TSD=AAATAAAAACTTTTACTATAG
11	58166965	58168146	DEL
11	61107785	61108124	DEL_ALU
11	61944785	61945082	DEL
11	64268439	64268499	DEL
11	65984338	65984339	ALU;TSD=GTGGAGACTTCTT
11	66711479	66713552	DEL
11	67599059	67599060	LINE1;TSD=AATAAAGAACTGAG
11	68067241	68069163	DEL
11	68183089	68183404	DEL
11	69400834	69401399	DEL
11	69548392	69548393	ALU;TSD=null
11	71861597	71861912	DEL_ALU
11	74024854	74027358	DEL
11	74145057	74145404	DEL_ALU
11	81556171	81556538	DEL_ALU
11	82132213	82132582	DEL
11	85542984	85542985	ALU;TSD=CATGCTGGCTTATTTTT
11	87918544	87918861	DEL_ALU
11	88964484	88967933	DEL
11	89932513	89932852	DEL_ALU
11	90193711	90196000	DEL
11	92608491	92608492	ALU;TSD=AAGATCCTAGACAG
11	92771855	92773374	DEL
11	93021134	93022156	DEL
11	93102800	93103118	DEL_ALU
11	93578001	93578212	DEL
11	93679228	93681405	DEL
11	94091791	94091841	DEL
11	94684369	94684370	LINE1;TSD=AA
11	96001923	96003398	DEL
11	96233119	96233431	DEL_ALU
11	96614759	96615086	DEL_ALU
11	98248208	98248606	DEL
11	99276322	99276662	DEL_ALU
11	102169772	102169773	ALU;TSD=AGTTTGCCAGTATTTTATT
11	102471846	102472162	DEL_ALU
11	103087928	103088084	DEL_ALU
11	103201280	103201281	ALU;TSD=ACAATAAATTTTTT
11	103916379	103918469	DEL
11	104180380	104180723	DEL_ALU
11	106044581	106044582	ALU;TSD=AAAGAAATAGCACTTGA
11	106595867	106596164	DEL_ALU
11	107158610	107158665	DEL
11	109930919	109930994	DEL
11	109976699	109977025	DEL_ALU
11	110276938	110276939	ALU;TSD=CGGGCCCGGTATTTTT
11	119932287	119932656	DEL
11	122595306	122595360	DEL
11	124830138	124830246	DEL_ALU
11	125053085	125053375	DEL_ALU
11	125719438	125719592	DEL
11	127456298	127456432	DEL
11	127740935	127740936	ALU;TSD=null
11	128682712	128683409	DEL
11	132368628	132368682	DEL
11	132558585	132558874	DEL_ALU
11	134305647	134305648	LINE1;TSD=null
11	134803512	134805507	DEL
12	177787	187378	CNV
12	240152	240208	DEL
12	1864004	1864320	DEL
12	2089856	2089857	ALU;TSD=CCTTTAACTATTTTT
12	2300995	2301051	DEL
12	4043666	4044819	DEL
12	7830054	7830055	ALU;TSD=TTATCAGGTTCTT
12	8558501	8568269	DEL
12	8558618	8591535	DEL
12	8568920	8587027	CNV
12	8625578	8625889	DEL_ALU
12	9016853	9017888	DEL
12	9635128	9688881	DEL
12	9722037	9723011	DEL
12	10234202	10234203	ALU;TSD=GGGCAAATTAATTTCTTT
12	11068046	11068300	DEL
12	11222191	11249671	CNV
12	11258524	11258838	DEL_ALU
12	11288103	11288156	DEL
12	11515723	11544432	CNV
12	12544792	12546607	INV
12	12933703	12933704	LINE1;TSD=ACACAGCTAATTTTTGTAGTTTTT
12	13199068	13199172	DEL
12	14258601	14258932	DEL_ALU
12	15104647	15104648	ALU;TSD=AAAACATTGAGGAGA
12	15608405	15613576	DEL
12	16420132	16421288	DEL
12	17444827	17445939	DEL
12	19806222	19806223	ALU;TSD=AAGAGGCATTAAGAG
12	22047473	22047575	DEL
12	22123796	22123797	ALU;TSD=TCCCTTCCATTCTT
12	23795725	23796038	DEL_ALU
12	23939446	23940212	DEL
12	24460412	24460701	DEL
12	25462949	25462950	ALU;TSD=AAAGATGCAGGGATGG
12	27433987	27434318	DEL_ALU
12	27864811	27864812	ALU;TSD=ATAATTGTCTATTTTT
12	28274591	28274592	ALU;TSD=AAAGAAAATGA
12	29844383	29846440	DEL
12	30371300	30371728	DEL
12	32358663	32358664	ALU;TSD=TATATGTCAATTTT
12	32443055	32443160	DEL
12	32963599	32963914	DEL_ALU
12	33296520	33307372	DEL
12	33325803	33325804	LINE1;TSD=CTTGCTTTTC
12	40673027	40673028	ALU;TSD=GCCAATAGTTTACTTTTT
12	40832796	40832797	ALU;TSD=GAAAAAATTTTAC
12	41183193	41183503	DEL
12	41757437	41757525	DEL
12	42238053	42238877	DEL_LINE1
12	43256994	43256995	LINE1;TSD=TTTAATTCTTTTTAATATTTTT
12	43717940	43717941	ALU;TSD=CCAAATATTCTT
12	45011174	45011496	DEL_ALU
12	45131147	45131148	ALU;TSD=CAATAACTTTTTT
12	45419555	45419556	ALU;TSD=AATAGAAAGATCTG
12	45903207	45909947	DEL
12	45948359	45948444	DEL
12	46046309	46046310	ALU;TSD=AAAAGCAATTATA
12	47075350	47075698	DEL_ALU
12	49709229	49710582	DEL
12	54245407	54245696	DEL_ALU
12	58028003	58029239	DEL
12	58083278	58083279	ALU;TSD=AAAAAACATTATAGTTTGG
12	60521816	60525034	DEL
12	61053825	61053826	ALU;TSD=AAGAATATTT
12	62295031	62295217	DEL
12	71532784	71533816	INV
12	71602363	71604480	DEL
12	72356517	72358157	DEL
12	72739802	72739855	DEL
12	74104692	74105402	DEL
12	74571808	74572021	DEL
12	75320691	75320692	ALU;TSD=GAAACCATCATTCTT
12	75931101	75931102	ALU;TSD=GAAGATTATTTTCTTT
12	77311762	77311763	ALU;TSD=GGACCAAACTTGTTTTT
12	77908656	77908979	DEL_ALU
12	82139688	82144323	DEL
12	83844044	83844608	DEL_LINE1
12	84042269	84042582	DEL_ALU
12	84086124	84086125	ALU;TSD=CACCAGTTTTTT
12	84484484	84484800	DEL_ALU
12	84593115	84596020	DEL
12	86523315	86523635	DEL_ALU
12	86653628	86653629	ALU;TSD=null
12	88338170	88338171	ALU;TSD=AAAAGAAAATG
12	94358328	94358640	DEL_ALU
12	95244023	95244449	DEL
12	95344056	95344366	DEL_ALU
12	96010454	96012414	DEL
12	96233490	96236776	DEL
12	97495358	97495359	ALU;TSD=AAAAACAAATGTAG
12	102102410	102107115	DEL
12	102314060	102314162	DEL_ALU
12	106890961	106890962	ALU;TSD=GTGTTAGCGTATTTT
12	111976291	111980000	DEL
12	115023765	115023828	DEL
12	122748410	122758684	DUP
12	122947416	122947466	DEL
12	123010338	123010667	DEL_ALU
12	124795816	124795936	DEL
12	127660426	127660752	DEL_ALU
12	127947266	127947318	DEL
12	128037977	128038294	DEL_ALU
12	128932242	128932541	DEL_ALU
12	130060287	130060618	DEL_ALU
12	130455055	130455056	ALU;TSD=AAAAAGGCTC
12	131093927	131094224	DEL
12	133469012	133469013	ALU;TSD=GACAACATTCTTTT
13	19201274	19204213	DEL
13	21124682	21124756	DEL
13	21894780	21894781	ALU;TSD=ACCGACCAAGACTTCT
13	22052127	22055126	DEL
13	22530362	22530363	ALU;TSD=AAAAAACCATCAG
13	22574676	22574770	DEL
13	23055208	23055515	DEL_ALU
13	23632424	23637293	DEL
13	24057640	24057972	DEL_ALU
13	24631697	24633601	DEL
13	25270559	25270895	DEL_ALU
13	25721017	25721336	DEL_ALU
13	27050020	27052181	DEL
13	29891562	29891873	DEL_ALU
13	36818914	36818975	DEL
13	37414451	37414779	DEL
13	37949998	37949999	ALU;TSD=CCTTTATTTATTTTTTT
13	38071941	38085578	DEL
13	39057317	39060204	DEL
13	39499637	39499638	ALU;TSD=GAAAGTAGAGAGTTGA
13	39934236	39935552	DEL
13	42726801	42726802	ALU;TSD=GACCTCTTTATTCTT
13	42771403	42771404	LINE1;TSD=AAAAAAAAAAAAAA
13	42946047	42946378	DEL_ALU
13	43053246	43053893	DEL
13	46719751	46720077	DEL_ALU
13	48015694	48015798	DEL
13	48419925	48420081	DEL_ALU
13	49533344	49536617	DEL
13	49951399	49953862	DEL
13	51069347	51075082	DEL
13	51551934	51552263	DEL_ALU
13	52852412	52864557	CNV
13	54606529	54606530	ALU;TSD=TATCAGTCCCTTCTT
13	55941166	55941469	DEL
13	56151096	56151219	DEL
13	56186576	56186577	ALU;TSD=TAAAAGTTTTTTTTTTT
13	57787093	57788378	DEL
13	57975500	57975848	DEL_ALU
13	59396895	59396896	ALU;TSD=GAGTGTTACAGTTCTT
13	60172490	60172823	DEL_ALU
13	61462344	61462345	LINE1;TSD=TCTTCTCTTTTTT
13	61734497	61734498	LINE1;TSD=AAGAGTTTGGGGA
13	61787418	61787419	ALU;TSD=AAAATTTAATTATTTTT
13	64162211	64162213	INS
13	65342437	65344433	DEL
13	65637801	65638216	DEL
13	67903471	67903472	ALU;TSD=TATCTATCTGTATTCTT
13	67950542	67950594	DEL
13	68977877	68978201	DEL
13	69966662	69966961	DEL_ALU
13	70079642	70079696	DEL
13	72386637	72386687	DEL
13	72477264	72480580	DEL
13	72478323	72482473	DEL
13	72843031	72846923	DEL
13	72893591	72898446	DEL
13	74074911	74075239	DEL_ALU
13	75625199	75625277	DEL
13	76639273	76639600	DEL_ALU
13	78997598	78998715	DEL
13	79259800	79259801	LINE1;TSD=TAAACACAGTTTT
13	79271601	79271602	ALU;TSD=AGAAATGGGCATATTC
13	79661067	79661402	DEL_ALU
13	80678313	80678630	DEL_ALU
13	81373740	81373741	ALU;TSD=AAAAATATAGAATGAACTGAGAAA
13	81747236	81747564	DEL_ALU
13	82355641	82355696	DEL
13	83179448	83179755	DEL_ALU
13	85270032	85270084	DEL
13	85871612	85871613	LINE1;TSD=ATATTTTCTTT
13	86166446	86166447	ALU;TSD=TT
13	86340152	86340153	LINE1;TSD=null
13	87392969	87392970	ALU;TSD=CTTTTAACTGAACATTTCTAATTTT
13	87696257	87696258	ALU;TSD=AAAGAACTCTCCACCCCA
13	89003264	89003600	DEL_ALU
13	90401846	90401847	ALU;TSD=AGAAATGAGTTTTATA
13	90550575	90550576	ALU;TSD=AACAGGAGACAGATG
13	90726943	90726998	DEL
13	90862850	90864805	DEL
13	90947642	90947643	ALU;TSD=null
13	91160038	91160287	DEL_ALU
13	92111709	92111830	DEL
13	92161674	92161675	ALU;TSD=AACATATTCATATTTT
13	92261286	92261287	ALU;TSD=AATTTAGATTTGA
13	92279248	92279583	DEL_ALU
13	92513980	92513981	ALU;TSD=AAATAAAACATGTTGCTA
13	93828421	93828422	ALU;TSD=CATGCAGAAAAGGTTTTT
13	94120730	94120731	ALU;TSD=AATAAAGAAGCA
13	97347834	97347922	DEL
13	98721236	98721556	DEL_ALU
13	98734914	98734915	ALU;TSD=GACAGTTTGCCATTAACCTT
13	99254021	99258251	DEL
13	100082627	100082628	ALU;TSD=TATCCATCCATCTGTT
13	101535973	101535974	ALU;TSD=GAGTTTATTCTT
13	101625773	101625871	DEL
13	101894135	101896428	DEL
13	103931643	103931958	DEL_ALU
13	104009854	104010173	DEL_ALU
13	104091776	104092258	DEL
13	104144377	104144660	DEL_ALU
13	105161209	105161523	DEL_ALU
13	106449327	106449921	DEL
13	107924538	107924861	DEL_ALU
13	108603779	108603844	DEL
13	108719818	108719819	ALU;TSD=AATAATTTTT
13	108947031	108951803	DEL
13	109361752	109362442	DEL
13	110812491	110812806	DEL_ALU
13	111076811	111076812	ALU;TSD=AATAAGTTAATTCTTT
13	111559414	111559652	DEL_ALU
13	111703587	111703667	DEL
13	112993799	112993800	ALU;TSD=AAAGAAAAAATTATTGAACAG
13	113520967	113520968	ALU;TSD=TCTGGGTGACTTCT
13	113616375	113616435	DEL
13	113991046	113991116	DEL
14	19112155	19126473	CNV
14	19275560	19303201	DEL
14	19286876	19293367	DEL
14	19290037	19297660	DEL
14	20335553	20423316	CNV
14	21176134	21176135	SVA;TSD=GCTAAAGGGATTTT
14	21536131	21536457	DEL_ALU
14	21778185	21778397	DEL
14	21952624	21954666	DEL
14	23922251	23922650	DEL
14	25262334	25263126	DEL
14	26147100	26147457	DEL_ALU
14	26283834	26284791	DEL
14	29728038	29728802	DEL
14	30854683	30854684	LINE1;TSD=AAGATTACCAAATGAC
14	31444309	31444310	ALU;TSD=AAGAAAAAGACAC
14	32953270	32954364	DEL
14	33435780	33436003	DEL_ALU
14	34514028	34514838	DEL
14	35401402	35401723	DEL_ALU
14	35428788	35432438	DEL
14	36674760	36674761	LINE1;TSD=AAGAATTTCCTGTTTA
14	37999777	38013670	DUP
14	38245235	38245451	DEL_ALU
14	40312966	40312967	ALU;TSD=GATTCTTATCAACTCTTTT
14	40882900	40882901	ALU;TSD=TCCTTTGTCCTCTA
14	41122391	41122487	DEL
14	41602366	41602417	DEL
14	43899449	43899532	DEL
14	45014099	45014100	ALU;TSD=CTCA
14	46577923	46578243	DEL_ALU
14	48334241	48334556	DEL_ALU
14	50118870	50119027	DEL_ALU
14	51408908	51409542	DEL
14	51432094	51432095	ALU;TSD=CTGGAATTAAATCTT
14	51719000	51719001	ALU;TSD=AAAGAAATCTTTCC
14	52594665	52594980	DEL_ALU
14	54564051	54564385	DEL_ALU
14	54710363	54713688	DEL
14	54815743	54815744	ALU;TSD=TGTCCCAAATATTCTT
14	55795871	55795872	ALU;TSD=TAAAACGTGGTTTATTTCT
14	59883503	59884059	DEL
14	60454171	60454172	ALU;TSD=CAACCTTAACTTCTTT
14	60575499	60575500	ALU;TSD=ATATTGATTTTTT
14	63226292	63226293	ALU;TSD=AGGGTATAT
14	63787170	63787502	DEL_ALU
14	65015043	65015044	ALU;TSD=GAGTTTCT
14	65606353	65608023	DEL
14	68603032	68603740	DEL
14	68995379	68995453	DEL_ALU
14	70687829	70689462	DEL
14	71320960	71321253	DEL_ALU
14	76813775	76814213	DEL
14	77193681	77193739	DEL
14	78249852	78250190	DEL_ALU
14	78982709	78982710	ALU;TSD=AGAATAGAAAAGAAGG
14	79653926	79654025	DEL_ALU
14	80106272	80115058	DEL
14	81786791	81786792	SVA;TSD=ACCATTTTTATAATTAAT
14	82499115	82503327	DEL
14	83019601	83019882	DEL_ALU
14	83386736	83386899	DEL
14	83435132	83437109	DEL
14	83852035	83852358	DEL
14	85139129	85139627	DEL
14	87858056	87858383	DEL_ALU
14	92125068	92125069	ALU;TSD=AAAAAAAGGAAGGGA
14	93336487	93338122	DEL
14	94235337	94235393	DEL
14	98494393	98494394	ALU;TSD=CCAACTCAAAGACAGTT
14	98783966	98785085	DEL
14	100844997	100845330	DEL_ALU
14	105417023	105418385	DEL
15	20393078	20419533	CNV
15	20598942	20625797	CNV
15	20846721	20867075	CNV
15	21902635	21929978	CNV
15	22336904	22343964	CNV
15	22372936	22383193	CNV
15	23671395	23674750	DEL
15	24207057	24207366	DEL_ALU
15	24350936	24389975	CNV
15	24354619	24507954	DEL
15	24377380	24438730	CNV
15	24384356	24440422	DEL
15	24409775	24485111	DEL
15	24450166	24484075	CNV
15	24495296	24502596	CNV
15	24839317	24839639	DEL_ALU
15	25116952	25118666	DEL
15	28175804	28175805	LINE1;TSD=GCTTGCCAACTCTT
15	28701268	28709132	CNV
15	29411474	29411896	DEL_LINE1
15	32291220	32291528	DEL_ALU
15	34741739	34742019	DEL_ALU
15	35009016	35009351	DEL_ALU
15	35473633	35473634	ALU;TSD=CCCTGTGTTCACTATTCTT
15	39372403	39373464	DEL
15	39691605	39691606	ALU;TSD=TAAATGTCTGTGTTC
15	39744385	39744852	DEL
15	41100332	41100333	ALU;TSD=CAAAGCTACTCTTT
15	41604020	41604430	DEL
15	42017735	42018067	DEL_ALU
15	45569912	45569913	ALU;TSD=null
15	46067964	46068314	DEL_ALU
15	46126006	46126007	ALU;TSD=GAAAATTATGCAAAATCC
15	46860705	46861165	DEL
15	47507342	47507343	LINE1;TSD=TTCAATTGCATTTA
15	47720633	47720807	DEL
15	49544866	49547867	DEL
15	52525183	52525516	DEL_ALU
15	54188220	54188221	ALU;TSD=TAAAATGCATCTC
15	55429892	55430213	DEL_ALU
15	58282108	58282214	DEL_ALU
15	59712886	59713217	DEL_ALU
15	61328974	61328975	LINE1;TSD=TAGAGCAGAGATTTCT
15	64633178	64633503	DEL_ALU
15	64664107	64664226	DEL
15	66633812	66634133	DEL_ALU
15	66877660	66878428	DEL
15	67868283	67869396	DEL
15	70408637	70408638	ALU;TSD=AAAAAAAAGAGCGTC
15	71708614	71713685	DEL
15	71881570	71882968	DEL
15	72385965	72388158	DEL
15	72639551	72639552	ALU;TSD=CAGAAATAGTTCTT
15	73983319	73983320	ALU;TSD=TATGCTTTT
15	76884546	76895794	CNV
15	77092501	77092502	ALU;TSD=ATACATGGATATTTTT
15	77330749	77332719	DEL
15	77851960	77853175	DEL
15	77910861	77911235	DEL_ALU
15	79084263	79084355	DEL
15	79891843	79892164	DEL_ALU
15	83551623	83557675	DEL_LINE1
15	86057007	86059202	DEL
15	91402096	91402416	DEL_ALU
15	94819903	94819904	ALU;TSD=AAATAAGAAATATTTGG
15	94933278	94933346	DEL
15	98817015	98817425	DEL
15	98842312	98843808	DEL
15	98900055	98900632	DEL
15	99574506	99575633	DEL
15	99630150	99630151	ALU;TSD=CAGGTGTG
15	100097884	100097934	DEL
15	100416670	100423244	DEL
15	100609946	100612578	DEL
15	100810993	100810994	ALU;TSD=CCATTTTAAACATTTTT
16	998832	1000718	DEL
16	5180176	5180669	DEL
16	6957702	6958488	DEL
16	8535509	8535510	ALU;TSD=AGAAACATCCTGAGAA
16	8755309	8756834	DEL
16	11683732	11685291	DEL
16	14075622	14075741	DEL
16	15059676	15076875	CNV
16	15080267	15105113	CNV
16	15099303	15123498	CNV
16	16631704	16651111	CNV
16	19230429	19230781	DEL_ALU
16	21239067	21239068	ALU;TSD=CCTGCAAGTTTTCT
16	21518346	21544882	CNV
16	21541685	21569415	CNV
16	21573321	21580382	CNV
16	21588291	21593314	CNV
16	22611652	22662020	CNV
16	22623100	22783757	CNV
16	22650742	22695701	CNV
16	23047727	23049533	DEL
16	23528535	23528848	DEL_ALU
16	23865300	23865301	ALU;TSD=GGTCAAGGCACTTCTT
16	23910886	23911192	DEL
16	25340109	25343128	DEL
16	26608023	26608365	DEL_ALU
16	26963254	26963386	DEL
16	32328771	32370968	CNV
16	32366481	32410672	CNV
16	32418983	32469917	CNV
16	32600305	32601869	DEL
16	32611029	32642738	CNV
16	32831659	32863935	CNV
16	33446163	33480261	CNV
16	33467709	33467710	ALU;TSD=AAAATGTAATTAACG
16	33470755	33495606	CNV
16	33484521	33543753	CNV
16	33524565	33570784	CNV
16	33586835	33590310	DEL
16	33588532	33626594	CNV
16	34457085	34712399	CNV
16	46979627	46979684	DEL
16	48508916	48511376	DEL
16	48816867	48817185	DEL_ALU
16	49036072	49036207	DEL_ALU
16	49979396	49979710	DEL_ALU
16	52032355	52033598	DEL
16	52904248	52904373	DEL
16	53091851	53095128	CNV
16	53874981	53874982	ALU;TSD=AATAAGAAGTGCCTG
16	54660356	54660665	DEL_ALU
16	55798890	55822423	CNV
16	55832207	55864521	CNV
16	58647190	58650264	DEL
16	58673838	58677346	DEL
16	58819558	58819633	DEL
16	60032082	60032396	DEL_ALU
16	61092204	61092205	ALU;TSD=CCTACAACTATCTT
16	63442423	63442753	DEL_ALU
16	63756306	63756388	DEL
16	70181849	70196732	CNV
16	70553009	70553329	DEL_ALU
16	71866702	71869740	CNV
16	72753292	72753597	DEL_ALU
16	74393945	74434300	CNV
16	75429831	75430673	DEL
16	76539138	76544021	DEL
16	77090638	77092862	DEL
16	78371604	78384909	DEL
16	78757451	78757506	DEL
16	78876665	78877564	DEL
16	80196900	80197002	DEL
16	81619267	81619360	DEL
16	82164197	82164444	DEL
16	82164690	82164691	ALU;TSD=AAGAATGGACATATG
16	84501432	84504122	DEL
16	85149501	85150074	DEL
16	85188639	85189823	INV
16	86284308	86284616	DEL_ALU
16	87981799	87981853	DEL
16	88112672	88115662	DEL
16	88862644	88863596	DEL
16	89291389	89291390	ALU;TSD=AAGATGCATTCTGG
16	89896054	89898405	DEL
17	185812	185874	DEL
17	548982	550033	DEL
17	723720	724862	DEL
17	1097737	1098192	DEL
17	1146295	1147646	DEL
17	1602167	1602943	DEL
17	1654675	1655405	DEL
17	1912668	1913537	DEL
17	2719916	2721218	DEL
17	3734770	3735834	DEL
17	5464738	5465062	DEL_ALU
17	6874732	6875034	DEL_ALU
17	7755714	7755766	DEL
17	10006454	10006923	DEL
17	10203420	10203771	DEL_ALU
17	11430197	11430247	DEL
17	11557370	11557691	DEL_ALU
17	12196579	12196896	DEL_ALU
17	13220477	13220804	DEL_ALU
17	13531701	13532712	DEL
17	14189910	14191557	DEL
17	15863568	15863886	DEL_ALU
17	16534216	16534217	SVA;TSD=AAAAAATCTTTCTC
17	16661446	16704453	DUP
17	16711552	16724682	CNV
17	17230370	17231247	DEL
17	18359814	18376676	CNV
17	18418796	18465083	DEL
17	18421015	18422388	DEL
17	18507410	18522042	CNV
17	18729995	18745198	DEL
17	26780360	26783483	DEL
17	30852472	30872544	DEL
17	32484889	32485002	DEL
17	32872968	32874613	DEL
17	34376278	34376609	DEL_ALU
17	34436099	34482872	CNV
17	35143423	35143742	DEL_ALU
17	35755635	35760346	DEL
17	35755640	35758781	DEL
17	36169343	36169344	ALU;TSD=GGATATCTTCTTTT
17	36963475	36964937	DEL
17	39421554	39432271	DEL
17	43576081	43589376	DEL
17	43647443	43649234	DEL
17	44086723	44086961	DEL
17	44176394	44176717	DEL_ALU
17	44223907	44224221	DEL_ALU
17	44230893	44262697	CNV
17	44341412	44366497	CNV
17	45966643	45966644	ALU;TSD=null
17	51957128	51957129	ALU;TSD=AGAAAACCCC
17	52705176	52705226	DEL
17	54947583	54947584	ALU;TSD=AAAATTAAGAAATGATTTGA
17	55687808	55689918	DEL
17	56206964	56213515	CNV
17	56210429	56211237	DEL
17	61565904	61565905	ALU;TSD=ATACAGTCACTTTT
17	62213208	62214203	DEL
17	65514573	65514637	DEL
17	65520854	65521184	DEL_ALU
17	65727354	65727630	DEL_ALU
17	72393115	72393249	DEL
17	74362239	74365300	DEL
17	74987520	74987839	DEL_ALU
17	76282240	76283435	DEL
17	78056052	78056053	ALU;TSD=CAGGCGTG
17	79577680	79578003	DEL_ALU
17	80185492	80185561	DEL
17	81025596	81025682	DEL
18	207028	207707	DEL
18	853490	853491	ALU;TSD=AAGAAATCATAC
18	1235790	1235791	ALU;TSD=AAAAATAATTACA
18	2472723	2472837	DEL
18	3997014	3997471	DEL
18	4955590	4955987	DEL
18	5209320	5210888	DEL
18	5209658	5210654	DEL
18	5324643	5326242	DEL
18	5325026	5325315	DEL
18	5457105	5457205	DEL
18	9225123	9225460	DEL
18	9287084	9287085	ALU;TSD=AATACTGTGTGTTTTTT
18	9385391	9385715	DEL_ALU
18	9621959	9622233	DEL
18	10222279	10223606	DEL
18	10331018	10331158	DEL
18	11509065	11511527	INV
18	11509705	11511474	DEL
18	12503560	12504493	DEL
18	14803791	14811140	CNV
18	15095262	15095263	LINE1;TSD=GAGGACACTATTCTT
18	24571615	24572338	DEL
18	24791588	24791874	DEL
18	25851171	25851172	ALU;TSD=null
18	26363743	26364064	DEL_ALU
18	27629680	27630006	DEL_ALU
18	27800861	27800862	ALU;TSD=GGAAATAGGGTCTT
18	27872570	27872899	DEL_ALU
18	31746705	31747042	DEL_ALU
18	32530967	32531232	DEL
18	35306041	35306639	DEL
18	35315621	35315939	DEL_ALU
18	36512546	36512547	ALU;TSD=AAAAGCAAATTTGA
18	37061632	37061962	DEL_ALU
18	38006382	38006996	DEL
18	38864885	38868159	DEL
18	43261003	43261328	DEL_ALU
18	44338417	44338754	DEL_ALU
18	44715166	44715243	DEL
18	45099894	45100206	DEL_ALU
18	45996143	45996460	DEL_ALU
18	46159351	46159429	DEL
18	47147440	47147441	ALU;TSD=null
18	47694968	47698389	DEL
18	49444746	49444902	DEL
18	49931730	49931731	ALU;TSD=null
18	50462570	50463032	DEL
18	50612385	50612967	DEL
18	50925977	50926300	DEL_ALU
18	50930750	50930811	DEL
18	51952950	51956960	DEL
18	54706193	54706194	ALU;TSD=AAGATAAACATTC
18	54946735	54948718	DEL
18	55671122	55671428	DEL_ALU
18	57042133	57042185	DEL
18	57258178	57258516	DEL_ALU
18	57683363	57683364	ALU;TSD=GCCAGCCATCTT
18	59672757	59674196	DEL
18	60686113	60686114	ALU;TSD=AAGAACAACACATA
18	62996845	62996926	DEL
18	63487287	63487288	ALU;TSD=AAAAAAATCATCTGAGGC
18	63533238	63533582	DEL_ALU
18	63723836	63732368	DEL
18	63766845	63769201	DEL
18	64542930	64543251	DEL_ALU
18	66082127	66082181	DEL
18	66399175	66399176	ALU;TSD=AAAACTGAACACAT
18	66572511	66572512	ALU;TSD=GAAATTATATATTTTTTA
18	67160066	67160067	ALU;TSD=TGGTGGGCTTTTTT
18	67949598	67949923	DEL_ALU
18	68846724	68847058	DEL_ALU
18	70353219	70353421	DEL
18	71444207	71444542	DEL_ALU
18	71456838	71456900	DEL
18	72152428	72152768	DEL_ALU
18	72779980	72780030	DEL
18	73570006	73570331	DEL_ALU
18	73901640	73902034	DEL
18	74347197	74348009	DEL
18	74365364	74365670	DEL_ALU
18	74638701	74638702	ALU;TSD=null
18	74769770	74770071	DEL_ALU
18	75266983	75268167	DEL
18	75267029	75267561	DEL
18	76662372	76666356	DEL
18	76664254	76665058	DEL
18	77309946	77312089	DEL
19	393559	395010	DEL
19	565965	568163	DEL
19	566005	569470	DEL
19	2909164	2910884	DEL
19	2909363	2910540	DEL
19	3711008	3711333	DEL
19	3715862	3717189	DEL
19	4217790	4224498	CNV
19	5509856	5510792	DEL
19	12539909	12540100	DEL
19	12556643	12558236	DEL
19	12694867	12698924	DEL
19	15046391	15049476	DEL
19	15927952	15927953	ALU;TSD=AAAAGAATGGAAAAGGA
19	18566051	18566665	DEL
19	21752923	21756703	CNV
19	23320788	23321105	DEL_ALU
19	24011300	24011301	SVA;TSD=AAGTATTTCAACCTT
19	27961358	27963241	DEL
19	31287472	31289746	DEL
19	31690684	31690685	ALU;TSD=AGAGAATTAAATGA
19	35851718	35863310	CNV
19	36662694	36662964	DEL
19	37046181	37046497	DEL_ALU
19	37284317	37284627	DEL_ALU
19	37463442	37463510	DEL
19	38341368	38345669	DEL
19	45444699	45444700	LINE1;TSD=TTT
19	45473128	45474248	DEL
19	46278623	46279603	DEL
19	47528255	47528724	DEL
19	51406745	51408334	DEL
19	51776390	51776701	DEL_ALU
19	52134835	52149093	CNV
19	52948969	52949075	DEL
19	53096015	53097618	DEL
19	53422195	53424196	DEL
19	54555536	54560655	DEL
19	55194225	55194291	DEL
19	55266365	55280663	CNV
19	56041811	56042147	DEL
19	56580958	56581008	DEL
19	56966061	56966062	ALU;TSD=AAAAATCAAATAAAAATGGATTAAAGAC
19	57425532	57425533	ALU;TSD=AAAAGTCTTCATCCTCG
19	57474871	57475609	DEL
20	594427	594481	DEL
20	1389096	1390815	DEL
20	1546228	1546229	ALU;TSD=AAGAAATGTTTCCTG
20	1560739	1593685	DEL
20	1589901	1593853	DEL
20	2359923	2360518	DEL
20	3037866	3038182	DEL_ALU
20	4082846	4082847	SVA;TSD=AAGAAAATACAAATCA
20	5268423	5268424	SVA;TSD=GACACTGGATTCTT
20	5534545	5534921	DEL_ALU
20	5629054	5630397	DEL
20	6150945	6151277	DEL_ALU
20	7274336	7274649	DEL_ALU
20	8816504	8816505	ALU;TSD=AAAACTTAGTGAC
20	9640983	9640984	ALU;TSD=AAGATTATTTTAATTT
20	9696761	9696815	DEL_LINE1
20	11517265	11517588	DEL_ALU
20	14529068	14529381	DEL_ALU
20	15711537	15711538	ALU;TSD=null
20	15711606	15712437	DEL
20	19061416	19061729	DEL_ALU
20	21286088	21288772	DEL
20	22655322	22655650	DEL_ALU
20	23103317	23103618	DEL
20	24903696	24904414	DEL
20	26092755	26094314	DEL
20	26297587	26302710	DEL
20	30899227	30899532	DEL_ALU
20	33115811	33116144	DEL_ALU
20	33241726	33244473	DEL
20	38337632	38337769	DEL_ALU
20	42271862	42274588	DEL
20	42676125	42676524	DEL_SVA
20	44359412	44359524	DEL
20	48543735	48543815	DEL
20	52750565	52750615	DEL
20	53292651	53292965	DEL_ALU
20	53761850	53761851	ALU;TSD=GAAAAATTTC
20	54114280	54114281	LINE1;TSD=null
20	54434518	54440716	DEL_LINE1
20	54463220	54463537	DEL_ALU
20	55587403	55587945	DEL
20	57723444	57723778	DEL_ALU
20	57785904	57786120	DEL_ALU
20	59804673	59804723	DEL
20	59974166	59974487	DEL_ALU
20	61330155	61330255	DEL
20	61724537	61725820	DEL
20	61724701	61725601	DEL
20	62267510	62268021	DEL
20	62392041	62392585	DEL
20	62767800	62767854	DEL
21	10945865	10990763	CNV
21	10992014	10999734	CNV
21	14415002	14415003	ALU;TSD=null
21	14981354	15016529	DEL
21	15244513	15253042	CNV
21	15253724	15259810	CNV
21	15264074	15272540	CNV
21	15652867	15652868	ALU;TSD=AAAAAATGATTAGG
21	16275282	16275361	DEL
21	18612378	18613698	DEL
21	19326713	19329268	DEL
21	22051926	22051995	DEL_ALU
21	23746673	23746730	DEL
21	24742232	24742546	DEL_ALU
21	24828945	24829264	DEL_ALU
21	26497431	26497432	ALU;TSD=AAGGAAGGATG
21	26825131	26825398	DEL_LINE1
21	27374095	27374746	INV
21	28020653	28021711	INV
21	28221359	28221360	ALU;TSD=CCGGGAAATGCTTTTTATT
21	30552224	30552588	DEL
21	30601816	30602156	DEL_ALU
21	37014963	37015170	DEL
21	37237944	37237945	ALU;TSD=AAAAAATGTTATTTTT
21	37321097	37321098	ALU;TSD=TGTTGAATCTTTTT
21	37864436	37864758	DEL_ALU
21	39004560	39004561	ALU;TSD=AAAAATTACCTCGT
21	39900346	39900670	DEL_ALU
21	41586865	41587190	DEL_ALU
21	42054568	42054759	DEL
21	42341846	42341901	DEL
21	42402882	42403203	DEL_ALU
21	45619181	45620711	DEL
21	45850285	45850611	DEL_ALU
21	47657351	47658672	DEL
22	16050654	16063474	CNV
22	17026339	17027748	DEL
22	18003573	18004242	DEL
22	18047360	18047718	DEL_ALU
22	18057747	18060454	DEL
22	18099516	18099826	DEL_ALU
22	18141696	18144628	DEL
22	18283896	18284218	DEL_ALU
22	18977575	18977640	DEL
22	19571624	19573094	DEL
22	20950623	20953843	DEL
22	23576847	23577807	DEL
22	23900769	23903232	DEL
22	23964852	23964910	DEL
22	24025584	24027537	DEL
22	24198505	24198506	ALU;TSD=null
22	24276431	24279231	DEL
22	24326713	24333476	CNV
22	26891514	26891650	DEL
22	29633088	29635394	DEL
22	31776449	31780070	CNV
22	32819942	32819943	ALU;TSD=AAAACTCCACAGCTTT
22	33751615	33751766	DEL
22	34430612	34430613	ALU;TSD=CAAATGGAACTTTT
22	35645163	35646142	DEL
22	37124157	37124258	DEL
22	37127073	37127245	DEL_ALU
22	37143062	37147890	DEL
22	37143105	37144405	DEL
22	42140478	42140800	DEL_ALU
22	42717347	42719846	DEL
22	43985160	43985210	DEL
22	44324605	44324606	LINE1;TSD=TGCAAAGGGCATTTTC
22	45252401	45253090	DEL
22	47696468	47696864	DEL
22	48645210	48645528	DEL_ALU
22	49077605	49077889	DEL
22	49425473	49425474	SVA;TSD=AAGAAAACTCCTTGCTC
22	49750824	49750881	DEL
22	50273378	50273379	ALU;TSD=GTCTGGGCCTGTTT
22	50664005	50664065	DEL
X	61438	61910	DEL
X	163196	182825	DEL
X	192421	212051	DEL
X	195224	198275	DEL
X	209510	221124	DEL
X	288023	290864	DEL
X	351731	353424	DEL
X	358103	418783	DEL
X	369994	394320	DEL
X	378345	384651	DEL
X	399249	399872	DEL
X	434172	438430	DEL
X	582189	589559	DEL
X	626635	627257	DEL
X	634214	643106	DEL
X	650623	650680	DEL
X	724352	725376	DEL
X	743015	749324	DEL
X	743673	746404	DEL
X	768929	772446	DEL
X	780426	828314	DEL
X	785956	787198	DEL
X	793106	810898	DEL
X	820642	824644	DEL
X	824490	825606	DEL
X	828838	829547	DEL
X	869425	872993	DEL
X	909861	911901	DEL
X	910113	910845	DEL
X	928361	980277	DEL
X	944859	946286	DEL
X	945705	948987	DEL
X	1106672	1107198	DEL
X	1257090	1257729	DEL
X	1258087	1258912	DEL
X	1435871	1438997	DEL
X	1437891	1438936	DEL
X	1463758	1467195	DEL
X	1464989	1467019	DEL
X	1465463	1466325	DEL
X	1486390	1495429	DEL
X	1517468	1525056	DEL
X	1535211	1535281	DEL
X	1634919	1638906	DEL
X	1669235	1669998	DEL
X	1671131	1676031	DEL
X	1726628	1732502	DEL
X	1726816	1727972	DEL
X	1732247	1735059	DEL
X	1781542	1785503	DEL
X	1793123	1796182	DEL
X	1893003	1895720	DEL
X	1907793	1925810	DEL
X	1910842	1914715	DEL
X	1911061	1911661	DEL
X	1915938	1934002	DEL
X	1922909	1926678	DEL
X	1989033	2002433	DEL
X	2025532	2028129	DEL
X	2034620	2035901	DEL
X	2136964	2138666	DEL
X	2190036	2191231	DEL
X	2253258	2260602	DEL
X	2277451	2278344	DEL
X	2278503	2285307	DEL
X	2280430	2304364	DEL
X	2292543	2294772	DEL
X	2366748	2399662	DEL
X	2372137	2377667	DEL
X	2434707	2435491	DEL
X	2458444	2459473	DEL
X	2515310	2516429	DEL
X	2570094	2589730	DEL
X	2580429	2581744	DEL
X	2622736	2624007	DEL
X	2805121	2805122	LINE1;TSD=null
X	2813405	2813728	DEL_ALU
X	2901743	2930026	DEL
X	2917491	2921551	DEL
X	2947858	2957494	DUP
X	3011110	3020851	DEL
X	3064239	3064240	ALU;TSD=AAAAGAAAAAGAAAGA
X	3150625	3150627	INS
X	3185852	3187996	DEL
X	3294909	3295535	DEL
X	3326031	3329216	DEL
X	3346301	3351906	DEL
X	3484352	3558867	DUP
X	3511628	3511629	LINE1;TSD=null
X	3599706	3599707	ALU;TSD=TT
X	3606235	3606653	DEL
X	3609471	3609526	DEL
X	3687415	3703428	DEL
X	3703420	3718736	DEL
X	3731706	3739682	CNV
X	3735212	3745961	CNV
X	3879103	3879104	LINE1;TSD=null
X	3973863	3973917	DEL
X	3982951	3990937	DEL
X	4025923	4025974	DEL
X	4055996	4055997	ALU;TSD=CAGTCGTATTTTT
X	4116403	4116518	DEL
X	4135699	4135814	DEL
X	4172222	4172223	ALU;TSD=null
X	4233776	4234935	DEL
X	4234416	4235092	DEL
X	4236802	4251464	DEL
X	4327018	4327019	ALU;TSD=CACCACAGTATTTATT
X	4379954	4380006	DEL
X	4382172	4392070	DEL
X	4659604	4659605	LINE1;TSD=TT
X	4718495	4718496	ALU;TSD=null
X	4763225	4782111	DEL
X	4916708	4916709	ALU;TSD=ACATCTTAGATTCTTCTT
X	4952559	4956915	DEL
X	4953842	4953843	ALU;TSD=TTAAATGTTT
X	5055345	5057501	DEL
X	5159449	5164202	DEL
X	5206767	5206833	DEL
X	5361806	5363114	DEL
X	5449318	5477338	DUP
X	5481647	5496689	DEL
X	5538006	5538065	DEL
X	5570336	5570680	DEL_ALU
X	5653213	5654540	DEL
X	5700930	5702199	DEL
X	5736335	5737554	DEL
X	5737304	5737475	DEL
X	5739550	5739918	DEL
X	5770974	5771039	DEL
X	5781754	5781755	ALU;TSD=TGCTGTATTGTTT
X	5913070	5913342	DEL
X	5981902	6094156	DEL
X	6032455	6035561	DEL
X	6098976	6098977	ALU;TSD=null
X	6172055	6253928	DUP
X	6280643	6280644	ALU;TSD=null
X	6289424	6441948	DUP
X	6304132	6314759	DEL
X	6304187	6314903	CNV
X	6338280	6349405	DUP
X	6450536	6466660	DUP
X	6546090	6546182	DEL
X	6553786	6810498	DEL
X	6587841	6588003	DEL
X	6595308	7515400	DEL
X	6726073	6727444	DEL
X	6744655	6829033	DEL
X	6805783	6814540	DEL
X	6920132	6936637	DEL
X	7167702	7168924	DEL
X	7208548	7208549	LINE1;TSD=null
X	7208889	7211376	DEL
X	7286803	7311421	DEL
X	7318688	7495426	DEL
X	7487044	7586777	CNV
X	7492456	7492457	LINE1;TSD=TTATTGTATGCTT
X	7501257	7621795	DUP
X	7579206	7601961	DEL
X	7619445	7679429	DEL
X	7711105	7711106	LINE1;TSD=null
X	7727698	7727699	ALU;TSD=null
X	7761191	7761192	ALU;TSD=null
X	7798705	7798706	LINE1;TSD=null
X	7838340	7956724	DEL
X	7932146	7944040	DEL
X	8024056	8024057	ALU;TSD=AAAAAATCAAGAGTA
X	8084563	8088175	DEL
X	8114725	8114726	LINE1;TSD=null
X	8122956	8123780	DEL
X	8149287	8149288	ALU;TSD=CTCATTAAATATTTTTT
X	8171202	8179574	DEL
X	8197961	8349082	DEL
X	8290447	8335335	DEL
X	8374863	8456441	DUP
X	8414134	8429188	DUP
X	8456074	8456371	DEL
X	8580581	8580653	DEL
X	8644055	8681405	DUP
X	8675984	8676042	DEL
X	8709374	8710380	DEL
X	8786514	8788914	DEL
X	8839235	8857520	DEL
X	8878375	8878427	DEL
X	8948436	8948491	DEL
X	8964831	8967243	DEL
X	9066905	9066962	DEL
X	9116092	9116093	ALU;TSD=null
X	9135425	9136655	DEL
X	9174424	9174425	ALU;TSD=GACGAGGTCTTTT
X	9385298	9385299	ALU;TSD=null
X	9483027	9483833	DEL
X	9516444	9516448	INS
X	9553829	9559221	DEL
X	9577278	9577279	ALU;TSD=null
X	9653719	9653775	DEL
X	9698247	9698417	DEL
X	9745809	9749281	DEL
X	9782060	9794962	DEL
X	9805013	9805108	DEL
X	9917061	9917062	LINE1;TSD=null
X	9957233	9957234	ALU;TSD=null
X	9957923	9963345	DEL
X	10212230	10216340	DEL
X	10233280	10233281	LINE1;TSD=TTT
X	10240308	10240386	DEL
X	10346496	10353586	DEL
X	10346677	10353846	CNV
X	10457093	10457911	DEL
X	10528860	10531081	DEL
X	10552944	10558410	DEL
X	10571074	10571075	LINE1;TSD=null
X	10684958	10699980	DEL
X	10688701	10697472	CNV
X	10695649	10701112	DEL
X	10713733	10713734	ALU;TSD=null
X	10853678	10856143	DEL
X	11010862	11010997	DEL
X	11055259	11055260	ALU;TSD=null
X	11096392	11096731	DEL_ALU
X	11098427	11098428	ALU;TSD=null
X	11182018	11182019	ALU;TSD=AAAGAAATCAGCAGTC
X	11201717	11201718	ALU;TSD=null
X	11628393	11628394	LINE1;TSD=AAGAAATTAAAACATTTT
X	11731977	11731978	LINE1;TSD=TTAGTTTACTCAATTCCATGTGGA
X	11830023	11830113	DEL
X	11885210	11885211	LINE1;TSD=null
X	11932522	11932605	DEL
X	12033329	12033330	ALU;TSD=AAGAATACATGCTACC
X	12114294	12115191	DEL
X	12211890	12211954	DEL
X	12271780	12271841	DEL
X	12329843	12329844	ALU;TSD=null
X	12380576	12394209	DEL
X	12384710	12384711	LINE1;TSD=null
X	12434234	12436825	DEL
X	12466523	12483859	DEL
X	12490969	12492265	DEL
X	13122187	13125909	DEL
X	13167642	13167643	ALU;TSD=null
X	13205696	13205801	DEL
X	13216928	13217230	DEL
X	13244329	13244330	LINE1;TSD=null
X	13319978	13319979	ALU;TSD=null
X	13419363	13421005	DEL
X	13420981	13421696	DEL
X	13506501	13508250	DEL
X	13697604	13701494	DEL
X	13824329	13824330	ALU;TSD=null
X	13829184	13947990	DUP
X	13843175	13843176	ALU;TSD=CTGTGTCTCTTCTT
X	13857169	13863380	DEL
X	13872906	13875303	DEL
X	13949683	14156025	DUP
X	14022258	14022259	ALU;TSD=null
X	14110172	14117365	CNV
X	14110735	14140814	DEL
X	14147644	14366811	DUP
X	14152015	14152016	LINE1;TSD=TCTCTTTTCTTATT
X	14183240	14183241	ALU;TSD=null
X	14240900	14240961	DEL
X	14406055	14406111	DEL
X	14432731	14432732	LINE1;TSD=TAGA
X	14596377	14596378	LINE1;TSD=null
X	14797755	14799414	DEL
X	14836235	14836236	ALU;TSD=AAAATT
X	14917253	14917254	ALU;TSD=GAACTAGAAAGTCTTTC
X	15050739	15050740	ALU;TSD=AACAGCTTGCTTTT
X	15105544	15114913	DEL
X	15175768	15175769	LINE1;TSD=null
X	15189176	15292014	DUP
X	15238353	15238611	DEL
X	15246394	15247968	DEL
X	15347791	15347956	DEL
X	15355982	15361333	DUP
X	15419482	15419483	ALU;TSD=null
X	15441026	15441080	DEL
X	15522467	15573276	DUP
X	15583582	15583583	ALU;TSD=null
X	15626865	15626866	ALU;TSD=AAAAGAGACATCTG
X	15664365	15720388	CNV
X	15839688	15839741	DEL
X	15975940	15977108	DEL
X	16312483	16312707	DEL
X	16360393	16367091	DEL
X	16364231	16364349	DEL
X	16368092	16370986	DEL
X	16412216	16420740	DEL
X	16427679	16428212	DEL_LINE1
X	16472172	16479242	DEL
X	16533395	16533558	DEL
X	16556845	16556949	DEL
X	16572843	16572844	ALU;TSD=null
X	16596991	16602321	DEL
X	16666286	16692414	DUP
X	16694683	16695230	DEL
X	16935599	16935600	ALU;TSD=null
X	16941924	16941925	ALU;TSD=null
X	16955572	16956564	DEL
X	16976416	16976417	ALU;TSD=null
X	17186016	17195233	DEL
X	17246632	17497934	DUP
X	17349514	17349515	ALU;TSD=CAGTTGTATTTTT
X	17502753	17502822	DEL
X	17520616	17520931	DEL_ALU
X	17544375	17544444	DEL
X	17556037	17556180	DEL
X	17637426	17638164	DEL
X	18118310	18120917	DEL
X	18168241	18180552	DEL
X	18278753	18280881	DEL
X	18352754	18352755	LINE1;TSD=AGCCTTGTGTATTTTG
X	18353048	18353340	DEL
X	18397745	18397880	DEL
X	18399871	18401829	DEL
X	18436800	18436958	DEL
X	18436888	18436962	DEL
X	18468816	18474273	DEL
X	18847561	18847562	ALU;TSD=null
X	18888689	18957355	DUP
X	18952948	18952949	ALU;TSD=null
X	19042771	19122398	DUP
X	19073290	19073980	DEL
X	19127122	19135848	DEL
X	19283463	19381414	DUP
X	19357192	19357193	ALU;TSD=AAAGAACTATTCCT
X	19374800	19374936	DEL
X	19411868	19411952	DEL
X	19435029	19488491	DUP
X	19466074	19469129	CNV
X	19470192	19470468	DEL
X	19540241	19635153	DUP
X	19635311	19635621	DEL
X	19829295	19831199	DEL
X	19946495	19948330	DEL
X	20138974	20152179	CNV
X	20174402	20174403	ALU;TSD=null
X	20238579	20238666	DEL
X	20263983	20265790	DEL
X	20482662	20486786	DEL
X	20597650	20666052	DEL
X	20754401	20754402	ALU;TSD=null
X	20815391	20815496	DEL
X	20860022	20860146	DEL
X	20886928	20887286	DEL
X	20923183	20923184	ALU;TSD=AACTCCTAGGCTG
X	21015832	21015833	ALU;TSD=AAAAAA
X	21016021	21016078	DEL
X	21254191	21254243	DEL
X	21286749	21298165	DEL
X	21300882	21347108	DEL
X	21322861	21322917	DEL
X	21357610	21361255	DEL
X	21453093	21453094	LINE1;TSD=null
X	21485800	21485801	ALU;TSD=null
X	21800758	21800920	DEL
X	21865704	21865705	ALU;TSD=TGGTATT
X	21884420	21884421	ALU;TSD=GAAAAGTGTTCTAG
X	22035562	22040699	DUP
X	22037606	22037703	DEL
X	22339982	22340043	DEL
X	22365083	22365084	ALU;TSD=GCTTCCTTTCTTTTT
X	22369769	22369770	LINE1;TSD=AAATACTTTTTTTTT
X	22377636	22378087	DEL
X	22388080	22390197	DEL
X	22492009	22497620	CNV
X	22492030	22497716	DEL
X	22504994	22504995	ALU;TSD=null
X	22624887	22630718	DEL
X	22698248	22921088	DEL
X	22735316	22747548	CNV
X	22768204	22768205	LINE1;TSD=AGAAAGACAGGGCAGGGG
X	22855548	22855837	DEL_ALU
X	22941250	22955053	DEL
X	22947646	22997060	DEL
X	22960251	22960252	ALU;TSD=null
X	23030827	23068702	DEL
X	23076960	23082999	DEL
X	23179256	23179257	LINE1;TSD=null
X	23202759	23227700	DEL
X	23384572	23386277	DEL
X	23475469	23490638	DUP
X	23600453	23600454	LINE1;TSD=GAAAAAGGCAACAGAC
X	23672647	23675179	DEL
X	23798222	23798278	DEL
X	23812115	23813045	DEL
X	23839396	23846879	DEL
X	23849563	23864095	DUP
X	23899994	23906285	DUP
X	24015943	24022659	DEL
X	24087236	24087303	DEL
X	24103576	24103577	SVA;TSD=null
X	24110987	24116767	DEL
X	24184274	24185041	DEL
X	24254806	24256768	DEL
X	24259047	24276594	DEL
X	24292700	24293032	DEL_ALU
X	24302880	24304158	DEL
X	24539415	24540978	DEL
X	24736870	24738017	DEL
X	24756029	24756359	DEL_ALU
X	24842821	24842822	ALU;TSD=null
X	24877203	24878541	DEL
X	25159302	25159303	ALU;TSD=null
X	25317339	25318221	DEL
X	25333375	25336819	DEL
X	25380271	25393090	DEL
X	25614920	25616937	DEL
X	25621786	25623133	DEL
X	25658706	25658969	DEL
X	25743848	25743910	DEL
X	25781546	25785920	DEL
X	25845880	25845966	DEL
X	25889622	25889623	LINE1;TSD=null
X	25903910	25903911	ALU;TSD=null
X	25947939	25948273	DEL_ALU
X	25978463	25978464	ALU;TSD=AAATTTATTCCTAGG
X	26001405	26003820	DEL
X	26167454	26167455	ALU;TSD=AAAAATACCTCTCCAC
X	26182841	26213475	CNV
X	26363143	26366293	DEL
X	26415770	26415771	ALU;TSD=null
X	26481460	26481461	ALU;TSD=null
X	26662515	26662751	DEL
X	26662877	26664888	DEL
X	26732761	26737387	DEL
X	26810528	26821593	DUP
X	26922374	26922375	SVA;TSD=AAGCATTCTCTA
X	26941756	26941757	ALU;TSD=null
X	26974000	27038949	DEL
X	27031915	27032235	DEL
X	27037894	27038845	DEL
X	27078143	27081780	DEL
X	27093160	27098209	DEL
X	27262924	27264660	DEL
X	27438780	27445808	DEL
X	27501908	27501909	ALU;TSD=null
X	27556908	27565422	DEL
X	27709402	27709403	LINE1;TSD=null
X	27714737	27716219	DEL
X	27805772	27805773	ALU;TSD=null
X	27818932	27820534	DEL
X	27831386	27831387	ALU;TSD=null
X	27846265	27846266	LINE1;TSD=null
X	27901141	27908024	DEL
X	27921604	27923920	DEL
X	27965086	27978103	DEL
X	28179426	28274555	DUP
X	28201364	28308110	DUP
X	28219334	28221818	DEL
X	28299044	28300619	DEL
X	28340101	28340102	ALU;TSD=null
X	28446509	28446510	ALU;TSD=TCAGCTTTCTT
X	28520775	28526025	DEL
X	28684443	28688832	DEL
X	28697847	28698607	DEL
X	28870137	28876943	DEL
X	28978946	28979002	DEL
X	29002940	29009590	DEL
X	29033920	29034025	DEL
X	29062877	29062878	ALU;TSD=null
X	29073909	29074235	DEL
X	29087035	29087280	DEL
X	29121653	29121654	ALU;TSD=AAGAAAACACTGGGG
X	29221641	29228745	DEL
X	29268334	29268335	LINE1;TSD=null
X	29270196	29270197	ALU;TSD=null
X	29341826	29341882	DEL
X	29372132	29372133	LINE1;TSD=AAAAAATA
X	29535983	29535984	ALU;TSD=null
X	29556712	29556783	DEL
X	29600102	29609129	DEL
X	29602048	29602049	LINE1;TSD=null
X	29625062	29625063	ALU;TSD=null
X	29736350	29738935	DEL
X	29817894	29817895	LINE1;TSD=null
X	30021349	30023422	DEL
X	30046608	30057664	DEL
X	30111950	30111951	LINE1;TSD=null
X	30209790	30209791	ALU;TSD=null
X	30218098	30218099	ALU;TSD=null
X	30242851	30243073	DEL
X	30299183	30308794	DUP
X	30313490	30317409	DEL
X	30347766	30348599	DEL
X	30501131	30577809	DUP
X	30559712	30560013	DEL
X	30622593	30625691	DEL
X	30653506	30658757	DEL
X	30665974	30665975	ALU;TSD=CAATATTCATTCATT
X	30676516	30677940	DEL
X	30820402	30820457	DEL
X	30821442	30821714	DEL
X	30904726	31026592	DUP
X	31000874	31006590	DEL
X	31081309	31085150	DEL
X	31155691	31157804	DEL
X	31185139	31185973	DEL
X	31275320	31275321	ALU;TSD=AGAAGTGGGCGTCTC
X	31346366	31346887	DEL
X	31370330	31370331	ALU;TSD=AAGAATGTGATACC
X	31379318	31379319	ALU;TSD=CTAGCTTCCCTTTTTT
X	31418407	31418507	DEL
X	31470360	31470361	ALU;TSD=AAAAAAATAGCA
X	31505930	31506850	DEL
X	31531698	31548491	DUP
X	31750354	31750355	LINE1;TSD=null
X	31764309	31779911	DEL
X	31811560	31812145	DEL
X	31823711	31828029	DEL
X	32001086	32001087	ALU;TSD=TCAGAGCTTTTGTT
X	32038514	32038515	LINE1;TSD=null
X	32068702	32078442	DEL
X	32103731	32103858	DEL
X	32226507	32226508	LINE1;TSD=null
X	32235660	32235835	DEL
X	32298048	32298151	DEL
X	32332915	32333290	DEL
X	32354096	32354146	DEL
X	32379285	32379286	LINE1;TSD=null
X	32391263	32391578	DEL
X	32423300	32425758	DEL
X	32430304	32431577	DEL
X	32430687	32430688	LINE1;TSD=null
X	32468501	32468932	DEL
X	32550298	32553844	DEL
X	32679357	32679358	ALU;TSD=null
X	32682318	32684596	DEL
X	32701649	32702687	DEL
X	32721051	32810353	DEL
X	32732633	32739759	DEL
X	32738366	32748132	DEL
X	32745923	32745924	ALU;TSD=AAAATATATTCCAATTCACTTT
X	32761413	32827319	DUP
X	32767842	32805506	CNV
X	32799269	32799270	LINE1;TSD=null
X	32857913	32861015	DEL
X	32882429	32884150	DEL
X	32886350	32886923	DEL
X	32919526	32921434	DEL
X	32929263	32969890	DEL
X	32987321	32989080	DEL
X	33008942	33009462	DEL
X	33135645	33264774	DUP
X	33208976	33209125	DEL
X	33209489	33216353	DEL
X	33302850	33302851	ALU;TSD=AAAAATCATC
X	33331251	33487391	DUP
X	33399054	33399055	LINE1;TSD=null
X	33599548	33666882	DUP
X	33653319	33801436	DUP
X	33666126	33727911	CNV
X	33712810	33713294	DEL
X	33766060	33766061	ALU;TSD=null
X	33838634	33843183	CNV
X	34014937	34015879	DEL
X	34042872	34073166	DEL
X	34059695	34059766	DEL
X	34153303	34155879	DEL
X	34186496	34190012	DEL
X	34242454	34242455	ALU;TSD=AAAGAAATATG
X	34293483	34293484	ALU;TSD=GTGTTTCTT
X	34386583	34401708	DEL
X	34438376	34443008	DEL
X	34464346	34464347	ALU;TSD=AAAAAACTTCCATGA
X	34531540	34531541	LINE1;TSD=null
X	34747567	34747568	LINE1;TSD=AAAAAGATGTTTTCC
X	34858179	34875400	DUP
X	34942088	34942089	LINE1;TSD=null
X	34957236	34957763	DEL
X	34987883	34987884	LINE1;TSD=null
X	34992622	34992623	LINE1;TSD=AACTC
X	35012584	35012585	ALU;TSD=TAGACTATATTCTT
X	35027353	35027404	DEL
X	35028103	35028104	ALU;TSD=AAAAACGGCAATGAG
X	35064121	35064122	LINE1;TSD=TAAAACTGCATTTCC
X	35100607	35100608	ALU;TSD=null
X	35266960	35266961	ALU;TSD=null
X	35308066	35484789	DUP
X	35323501	35324110	DEL
X	35391199	35391200	LINE1;TSD=null
X	35419176	35419177	ALU;TSD=TATTT
X	35441649	35445201	CNV
X	35441717	35445295	DEL
X	35549079	35553722	DEL
X	35627442	35634397	DEL
X	35655992	35655993	ALU;TSD=null
X	35671820	35671821	ALU;TSD=null
X	35710355	35710586	DEL
X	35714095	35716002	DEL
X	35727018	35735906	DEL
X	35857036	35878354	DEL
X	35876507	35876866	DEL
X	35879047	35891337	DUP
X	35901427	35903509	DEL
X	35987025	35987026	ALU;TSD=null
X	36036371	36037056	DEL
X	36292921	36293190	INS
X	36352693	36352694	ALU;TSD=null
X	36475654	36476549	DEL
X	36512038	36512109	DEL
X	36591669	36764601	DUP
X	36644458	36650082	DUP
X	36667849	36737862	DEL
X	36743043	36743359	DEL
X	36743057	36743108	DEL
X	36763991	36773403	DUP
X	36907823	36933646	DEL
X	36983092	36988457	DEL
X	37031097	37034385	CNV
X	37037673	37037735	DEL
X	37066160	37067856	DEL
X	37195798	37195799	LINE1;TSD=null
X	37242570	37242571	LINE1;TSD=GGATC
X	37291685	37316024	DUP
X	37354638	37368276	CNV
X	37436552	37436553	LINE1;TSD=null
X	37574091	37579372	DEL
X	37701641	37701692	DEL
X	37813162	37855992	DUP
X	37974440	37974761	DEL_ALU
X	37986665	37986738	DEL
X	38097551	38097552	LINE1;TSD=null
X	38386513	38387335	DEL
X	38485618	38584308	DUP
X	38561080	38561081	LINE1;TSD=null
X	38584427	38588518	CNV
X	38590883	38631587	DUP
X	38752392	38755014	DEL
X	38903559	38904326	DEL
X	38948202	38957151	DEL
X	39002551	39002552	LINE1;TSD=null
X	39397358	39397360	INS
X	39642028	39654111	DUP
X	39939333	39939334	ALU;TSD=AAGAAAAGGATGAGGGAAG
X	40092270	40094867	DEL
X	40371270	40375553	DEL
X	40459354	40459424	DEL
X	40461270	40461776	DEL
X	40465562	40465732	DEL
X	40495454	40495512	DEL
X	40505174	40505498	DEL_ALU
X	40652511	40652512	ALU;TSD=AAGGAGACTGTTTTT
X	40682531	40682532	ALU;TSD=AAAGAAATCAATATACT
X	40932142	40932816	DEL
X	41057619	41057684	DEL
X	41101152	41102217	DEL
X	41159879	41162350	DEL
X	41214287	41215620	DEL
X	41339020	41361501	DUP
X	41343728	41345820	DEL
X	41431520	41431837	DEL
X	41571711	41572021	DEL
X	41646759	41646859	DEL
X	41866985	41867574	DEL
X	41921397	41921475	DEL
X	42040893	42053063	DUP
X	42060699	42284712	DUP
X	42165210	42165211	ALU;TSD=CTGCCTTTTACTTTT
X	42204450	42208025	DEL
X	42512293	42513869	DEL
X	42601572	42601573	LINE1;TSD=null
X	42747825	42760643	DUP
X	42976450	42976451	SVA;TSD=null
X	42995315	43000086	DEL
X	43005613	43016167	DEL
X	43010555	43010674	DEL
X	43017706	43017912	DEL
X	43090191	43090192	ALU;TSD=AGAAAATGGGCAA
X	43122185	43125636	DEL
X	43612929	43613072	DEL
X	43630876	43630877	LINE1;TSD=null
X	43669193	43669515	DEL_ALU
X	43844741	43845580	DEL
X	43886095	43886212	DEL
X	43944831	43944832	LINE1;TSD=null
X	43944831	43947288	DEL
X	44058433	44062832	CNV
X	44059561	44062635	DEL
X	44064123	44064124	ALU;TSD=null
X	44331448	44331580	DEL
X	44336413	44341767	DEL
X	44365819	44384141	CNV
X	44379815	44381379	DEL
X	44388485	44419630	CNV
X	44392587	44427391	DEL
X	44427162	44428047	DEL
X	44429385	44446520	DUP
X	44435597	44437774	DEL
X	44475667	44479908	DEL
X	44479867	44486656	DEL
X	44497023	44511860	DUP
X	44519535	44526696	DEL
X	44522080	44526656	CNV
X	44561503	44561504	ALU;TSD=TCCACTTTTT
X	44564146	44574565	DUP
X	44578565	44578566	SVA;TSD=AACATCCATCACC
X	44611708	44613745	DEL
X	44642003	44647911	DUP
X	44715417	44718330	DEL
X	44724299	44726062	DEL
X	44908140	44908141	ALU;TSD=CTCAAGTTACTTTTTT
X	45016247	45017614	DEL
X	45185289	45205582	DEL
X	45208735	45214687	DEL
X	45289029	45292881	DEL
X	45318884	45318885	ALU;TSD=AATGTTGGATTTT
X	45423273	45423945	DEL
X	45789392	45789393	LINE1;TSD=null
X	45817059	45817060	ALU;TSD=null
X	45856436	45857291	DEL
X	46347170	46347173	INS
X	46355358	46356852	DEL
X	46414700	46414701	LINE1;TSD=null
X	46661728	46661810	DEL
X	46707327	46707377	DEL
X	46794577	46795620	DEL
X	47093162	47093215	DEL
X	47117440	47154304	DEL
X	47183859	47183860	SVA;TSD=GACAGGGACAACTCTT
X	47218338	47224549	DUP
X	47329162	47335634	DEL
X	47353120	47353759	DEL
X	47366180	47381717	DEL
X	47401622	47410370	DEL
X	47708097	47708098	ALU;TSD=CAAAATCCAAAACTTTTT
X	47771488	47771489	ALU;TSD=null
X	47829457	47834256	DEL
X	47862951	48003688	CNV
X	47999721	48056440	CNV
X	48047631	48086232	CNV
X	48061368	48061555	DEL
X	48116282	48165949	DUP
X	48125593	48125748	DEL
X	48127600	48127762	DEL
X	48169696	48215049	DUP
X	48449189	48449317	DEL
X	48500496	48502929	DEL
X	48623509	48626754	DEL
X	48724413	48743697	DEL
X	48945168	48948889	DEL
X	48952964	48965729	CNV
X	48984944	48986890	DEL
X	49161314	49177223	CNV
X	49368756	49377573	DUP
X	49381978	49381979	LINE1;TSD=null
X	49382036	49385684	DEL
X	49384996	49393308	DEL
X	49405260	49405467	DEL
X	49411799	49411800	ALU;TSD=CAGGAAAAGCTCTTT
X	49628078	49628804	DEL
X	49945252	49946429	DEL
X	50387143	50396588	DEL
X	50640899	50640900	ALU;TSD=null
X	51131680	51136610	DEL
X	51259150	51276086	DUP
X	51326952	51327067	DEL
X	51373371	51373521	DEL
X	51376938	51377072	DEL
X	51551811	51553424	DEL
X	51693785	51693786	ALU;TSD=AAAAGCTGTG
X	51762707	51782852	DUP
X	51784227	51853863	DUP
X	51856584	51864982	DEL
X	52651001	52693039	DUP
X	52693577	52874118	DUP
X	52887623	52890080	DEL
X	52961285	52961607	DEL_ALU
X	53135119	53137163	DEL
X	53137316	53140138	DEL
X	53319071	53320350	DEL
X	53394360	53394361	ALU;TSD=null
X	53478093	53491686	DEL
X	53481193	53482847	DEL
X	53496416	53499888	DEL
X	53513441	53520776	DEL
X	53772344	53778301	DEL
X	53781934	53808203	DEL
X	53792163	53792218	DEL
X	53800902	53801312	DEL
X	53819547	53820294	DEL
X	53820721	53862221	DUP
X	53865806	53872862	DEL
X	53996020	53998329	DEL
X	54310880	54311004	DEL
X	54395463	54407670	DEL
X	54576156	54576222	DEL
X	54639392	54639573	DEL
X	54855750	54865350	DEL
X	54862268	54862603	DEL
X	54884545	54907315	DEL
X	54925379	54925430	DEL
X	54982950	54984213	DEL
X	55107915	55243227	DEL
X	55115353	55123489	DEL
X	55165288	55170174	DEL
X	55174560	55174561	ALU;TSD=null
X	55175838	55175839	LINE1;TSD=null
X	55507944	55511893	DUP
X	55585160	55585161	LINE1;TSD=ATATATTCTTGTTTTCTT
X	55658310	55661463	DEL
X	55666958	55666959	ALU;TSD=null
X	55691019	55695082	DEL
X	55702401	55709877	DEL
X	55721534	55722200	DEL
X	55801775	55808928	DEL
X	55978161	55981434	DEL
X	56079069	56102670	CNV
X	56079467	56197996	DUP
X	56263746	56293622	DUP
X	56284324	56375486	DUP
X	56323765	56329494	DEL
X	56376100	56380217	DEL
X	56404702	56404703	LINE1;TSD=null
X	56425378	56480257	CNV
X	56454806	56476291	CNV
X	56456104	56463112	DEL
X	56458535	56476593	DEL
X	56468360	56475190	CNV
X	56469196	56477683	DEL
X	56471419	56501194	DUP
X	56485624	56514805	DUP
X	56495410	56516794	DUP
X	56660990	56672840	DEL
X	56736234	56761933	DUP
X	56870760	56880191	DEL
X	56875182	56875284	DEL
X	56945446	56956844	DEL
X	56981660	56982346	DEL
X	57042857	57045761	DEL
X	57237328	57261003	DEL
X	57273089	57349083	DUP
X	57384886	57391046	DEL
X	57514064	57514155	DEL
X	57730485	57749071	CNV
X	57731363	57753009	CNV
X	57734979	57751980	CNV
X	57737171	57743177	DEL
X	57740875	57781019	CNV
X	57745725	57764368	CNV
X	57806452	57806453	LINE1;TSD=CCAAGTTCTTATTT
X	57834989	58009604	DEL
X	57909647	57976974	DUP
X	58009791	58039657	DUP
X	58064983	58064984	LINE1;TSD=CCAATCGCCATTTTCT
X	58162791	58162792	LINE1;TSD=AGAAACATCTGG
X	58165738	58200427	DEL
X	58195069	58200490	DEL
X	58284542	58285918	DEL
X	58286833	58289290	DEL
X	58286921	58288015	DEL
X	58366303	58371866	DEL
X	58449138	58463235	DEL
X	58474022	58484512	DEL
X	58477164	58483528	DEL
X	58491462	58494023	DEL
X	58506835	58527574	DEL
X	58546993	58551258	DEL
X	58547609	58547610	ALU;TSD=null
X	61798850	61815100	DEL
X	61801381	61806543	DEL
X	61802566	61811091	DEL
X	61816697	61852694	DEL
X	61817407	61827370	DEL
X	61820779	61822764	DEL
X	61833463	61839009	DEL
X	61834088	61852788	DEL
X	61840897	61843617	DEL
X	61852945	61856185	DEL
X	61854719	61854720	LINE1;TSD=AAAAAG
X	61860120	61869706	DEL
X	61866963	61903408	DEL
X	61868490	61873518	DEL
X	61892192	61898771	DEL
X	61893933	61896986	DEL
X	61935752	62091060	CNV
X	61951926	61954115	DEL
X	61982511	61994437	DEL
X	61988614	62000171	DEL
X	62017603	62026232	DEL
X	62060592	62060593	ALU;TSD=null
X	62082866	62082867	LINE1;TSD=null
X	62106904	62106905	ALU;TSD=null
X	62116559	62137852	DEL
X	62205645	62226504	DUP
X	62206160	62276540	DUP
X	62215449	62217589	DEL
X	62242859	62246525	DEL
X	62257804	62284188	DUP
X	62265030	62287973	DEL
X	62288913	62469720	DUP
X	62294712	62310650	DEL
X	62294772	62310640	CNV
X	62453551	62508791	DUP
X	62477056	62510281	DUP
X	62577933	62587869	DEL
X	62637668	62652377	DUP
X	62685751	62694646	DEL
X	62704919	62705019	DEL
X	62951213	62951461	DEL
X	62959740	62959741	LINE1;TSD=CTTAAAACTCTT
X	62975795	62977144	DEL
X	63021205	63021206	ALU;TSD=null
X	63035864	63035865	ALU;TSD=null
X	63044083	63051019	DEL
X	63097843	63097991	DEL
X	63127039	63127378	DEL
X	63164414	63164516	DEL
X	63229090	63244159	DEL
X	63387854	63387904	DEL
X	63440816	63440817	ALU;TSD=AAAAAACCAAGGTATT
X	63537694	63543054	DEL
X	63538179	63542761	CNV
X	63627966	63635547	DEL
X	63670635	63675332	DEL
X	63716412	63735365	DUP
X	63722121	63737562	DUP
X	63819125	63820418	DEL
X	64004962	64062235	DEL
X	64039290	64046207	DEL
X	64074221	64074222	ALU;TSD=AAGAGTTCAGCTGGA
X	64085142	64097518	DEL
X	64100990	64109040	DUP
X	64104128	64108392	DUP
X	64109687	64114033	DEL
X	64240820	64241709	DEL
X	64284527	64292263	DEL
X	64379708	64383550	DEL
X	64393277	64421874	DEL
X	64433941	64433942	LINE1;TSD=null
X	64487672	64487673	ALU;TSD=null
X	64506973	64507068	DEL
X	64589620	64593101	DEL
X	64615650	64615703	DEL
X	64802874	64808545	DEL
X	64842924	64844507	DEL
X	64905469	64921930	DUP
X	65020867	65044217	DEL
X	65067869	65093100	DUP
X	65079528	65079612	DEL
X	65113960	65114553	DEL
X	65113961	65114415	DEL
X	65542317	65551912	DEL
X	65578913	65582755	DEL
X	65664331	65664404	DEL
X	65771494	65864920	DUP
X	65772935	65794679	DUP
X	65777788	65785930	DUP
X	65786559	65789636	DEL
X	65806480	65827290	DUP
X	65820729	65872395	DUP
X	65916848	65916914	DEL
X	65918627	65918699	DEL
X	65936095	65960056	DUP
X	65967173	65967515	DEL_ALU
X	66028246	66029072	DEL
X	66048235	66048300	DEL
X	66053601	66060370	DEL
X	66064302	66074634	DEL
X	66103777	66103901	DEL
X	66107357	66113165	DEL
X	66150902	66190048	DUP
X	66180881	66186339	DEL
X	66318264	66318265	ALU;TSD=null
X	66333799	66333972	DEL
X	66412590	66443395	DUP
X	66456716	66457683	DEL
X	66483120	66484333	DEL
X	66531901	66537807	DEL
X	66636586	66702070	CNV
X	66661663	66732568	DUP
X	66670052	66694452	DEL
X	66879897	66924329	DEL
X	66993442	66994080	DEL
X	67058941	67059021	DEL
X	67080365	67082022	DEL
X	67085421	67085422	ALU;TSD=null
X	67123822	67130299	DEL
X	67135096	67135182	DEL
X	67141679	67141784	DEL
X	67165589	67192501	DUP
X	67175728	67176842	DEL
X	67187590	67214120	DUP
X	67232268	67246232	DEL
X	67545427	67545428	ALU;TSD=null
X	67578264	67634990	CNV
X	67667912	67670000	DEL
X	67736928	67737119	DEL
X	67766474	67772799	DUP
X	67815297	67815354	DEL
X	67827481	67876995	DUP
X	67841422	67843680	DEL
X	67875701	67877292	DEL
X	67898559	67903078	DEL
X	67934875	67934950	DEL
X	68045255	68045436	DEL
X	68319997	68321839	DEL
X	68330681	68330682	LINE1;TSD=null
X	68561459	68565338	DEL
X	68807480	68815695	DEL
X	68861391	68861392	LINE1;TSD=null
X	68874026	68885739	DEL
X	69003638	69020483	DEL
X	69011306	69020131	CNV
X	69023049	69026269	DEL
X	69200591	69201379	DEL
X	69239350	69239403	DEL
X	69303060	69303274	DEL
X	69419904	69448773	DUP
X	69427429	69446696	CNV
X	69438219	69446728	DEL
X	69462122	69470996	DUP
X	69731357	69734204	DEL
X	69842811	69842876	DEL
X	70034916	70036229	DEL
X	70102169	70102170	LINE1;TSD=null
X	70122996	70123933	DEL
X	70137290	70139954	DEL
X	70434539	70438224	DUP
X	70543854	70544799	DEL
X	71022532	71050874	CNV
X	71064563	71157334	CNV
X	71312620	71312621	LINE1;TSD=AACTGCATTAATACTTCT
X	71357156	71357534	DEL
X	71408878	71416241	DEL
X	71430729	71441329	DEL
X	71860788	71861447	DEL
X	72238298	72238299	ALU;TSD=null
X	72297660	72334425	DUP
X	72343223	72343224	LINE1;TSD=null
X	72423763	72423821	DEL
X	72581020	72581450	DEL
X	72848529	72856483	DEL
X	72992805	72998981	DEL
X	72997307	72997441	DEL
X	73004974	73094907	DUP
X	73022777	73022848	DEL
X	73089711	73090785	DEL
X	73166080	73169831	DEL
X	73172802	73176731	DEL
X	73194117	73196661	DEL
X	73400777	73400871	DEL
X	73426252	73426466	DEL
X	73496220	73496586	DEL
X	73516948	73518402	DEL
X	73550319	73550387	DEL
X	73816785	73817680	DEL
X	74154573	74154647	DEL
X	74216946	74216947	ALU;TSD=GCTTTTCTAGTTCTTTT
X	74249631	74249755	DEL
X	74360376	74360377	ALU;TSD=AAGAGATCTTT
X	74457229	74485658	DUP
X	74464226	74464387	DEL
X	74480626	74530298	DUP
X	74599737	74599800	DEL
X	74885259	74885260	ALU;TSD=null
X	74889445	74904218	DUP
X	75111521	75111583	DEL
X	75212778	75222868	CNV
X	75277077	75366938	DEL
X	75301385	75313459	CNV
X	75316532	75316821	DEL
X	75328210	75344469	CNV
X	75345754	75482545	DUP
X	75418334	75418386	DEL
X	75493658	75515099	CNV
X	75493696	75514939	DEL
X	75504175	75504302	DEL
X	75777695	75777807	DEL
X	75801323	75841719	CNV
X	75803073	75842039	DEL
X	75821429	75824703	DEL
X	76004940	76120864	DEL
X	76030109	76030285	DEL
X	76090768	76094679	DEL
X	76123370	76145606	DEL
X	76170971	76171308	DEL
X	76195189	76195190	LINE1;TSD=AAAA
X	76539575	76539653	DEL
X	76574661	76574662	ALU;TSD=AAAAAAACAAACACTGC
X	76764888	76769437	DEL
X	76845417	76849135	DEL
X	76863558	76867044	DEL
X	76881496	76881558	DEL
X	77013644	77029895	DEL
X	77055184	77085679	DUP
X	77121360	77123888	DEL
X	77515999	77524077	DEL
X	77696852	77697450	DEL_LINE1
X	77757016	77757105	DEL
X	77906416	77910911	DEL
X	77912083	77912156	DEL
X	77922691	77922926	DEL
X	77959041	77959098	DEL
X	78024911	78025278	DEL
X	78047643	78047644	ALU;TSD=GCACCAAAGCTTTTT
X	78151926	78153773	DEL
X	78192990	78193423	DEL
X	78259192	78259193	ALU;TSD=null
X	78415647	78415648	ALU;TSD=CAAGAAAAATGAGTCTTT
X	78467635	78467721	DEL
X	78534143	78534144	ALU;TSD=null
X	78590426	78590497	DEL
X	78724855	78724910	DEL
X	78738314	78738921	DEL
X	78863969	78921419	DUP
X	78921957	78926007	DEL
X	78927122	78946894	DUP
X	78946447	78948827	DEL
X	78979090	78989060	DEL
X	78997248	79021023	CNV
X	79004398	79008984	DEL
X	79100775	79104606	DEL
X	79120207	79120284	DEL
X	79207268	79207347	DEL
X	79222117	79222290	DEL
X	79238236	79238301	DEL
X	79263134	79303934	DUP
X	79315102	79316246	DEL
X	79316070	79324583	DEL
X	79318102	79325578	CNV
X	79332230	79336825	DEL
X	79365292	79367452	DEL
X	79484828	79484829	LINE1;TSD=null
X	79550979	79561187	DEL
X	79571266	79571267	ALU;TSD=CTTATTTTGTTTT
X	79735785	79769230	DEL
X	79762384	79765443	DEL
X	79846845	79846973	DEL
X	79926527	79971253	DUP
X	79969280	79969281	SVA;TSD=null
X	79981486	79981879	DEL
X	80023586	80027813	DEL
X	80088241	80174976	DEL
X	80132397	80132398	SVA;TSD=null
X	80139055	80139187	DEL
X	80213833	80232204	DUP
X	80215707	80219480	DEL
X	80218748	80239502	DUP
X	80242587	80242660	DEL
X	80254248	80260817	DEL
X	80287951	80295028	DEL
X	80292897	80293209	DEL
X	80315861	80315862	LINE1;TSD=GAGAAGTGCCTTTC
X	80407086	80411079	DEL
X	80416445	80417473	DEL
X	80432257	80443836	DEL
X	80463065	80464024	DEL
X	80560379	80574562	DEL
X	80572219	80572994	DEL
X	80748584	80780548	DEL
X	80948155	80948156	ALU;TSD=null
X	81042501	81043081	DEL
X	81053376	81153674	DEL
X	81166206	81166207	LINE1;TSD=null
X	81173657	81175908	DEL
X	81237715	81279117	DEL
X	81267904	81267905	ALU;TSD=null
X	81292278	81300668	DEL
X	81307626	81307627	ALU;TSD=null
X	81340526	81340527	LINE1;TSD=null
X	81395426	81415858	DEL
X	81415591	81419136	DEL
X	81438272	81438273	ALU;TSD=null
X	81480654	81480706	DEL
X	81524829	81524830	ALU;TSD=AAGTCATTCTT
X	81584026	81587382	DEL
X	81596386	81625572	DEL
X	81652302	81652303	SVA;TSD=null
X	81706625	81706626	ALU;TSD=null
X	81831984	81837662	DEL
X	81901108	81902898	DEL
X	81944152	81946346	DEL
X	81982368	81988139	DEL
X	81985703	82003431	DEL
X	81997188	82010483	DUP
X	82038473	82048134	DEL
X	82199150	82208177	DEL
X	82276466	82281774	DEL
X	82484873	82487113	DEL
X	82696198	82696199	LINE1;TSD=null
X	82696397	82696398	ALU;TSD=null
X	82765591	82765694	DEL
X	82829510	82830147	DEL
X	82907087	82929732	DUP
X	82911118	82918079	DEL
X	82959581	82975142	DEL
X	83018200	83018201	LINE1;TSD=null
X	83026888	83027008	DEL
X	83344649	83347502	DEL
X	83470608	83488221	DEL
X	83489877	83507931	DUP
X	83796129	83807679	DEL
X	83820465	83826042	DEL
X	83832147	83832459	DEL
X	83856998	83864607	DEL
X	83907426	83908998	DEL
X	84004697	84011515	DEL
X	84095992	84097966	DEL
X	84148356	84150339	DEL
X	84482579	84482666	DEL
X	84715318	84715319	LINE1;TSD=null
X	84782056	84783772	DEL
X	84824449	84829237	DEL
X	84853876	84853938	DEL
X	84908626	84908705	DEL
X	84948672	84956113	DEL
X	85015786	85020608	DEL
X	85249719	85249791	DEL
X	85285296	85285297	ALU;TSD=null
X	85334913	85335481	DEL
X	85358203	85358261	DEL
X	85434728	85434729	LINE1;TSD=null
X	85537769	85538081	DEL_ALU
X	85725040	85725113	DEL
X	85750744	85750745	LINE1;TSD=null
X	85781798	85781799	LINE1;TSD=AGAAATGAAAATTAGA
X	85788275	85788408	DEL
X	85878760	85879080	DEL_ALU
X	85893094	85895372	DEL
X	85934792	85934889	DEL
X	85935550	85935551	LINE1;TSD=null
X	86036345	86038149	DEL
X	86089540	86090568	DEL
X	86095313	86095314	ALU;TSD=null
X	86137692	86137744	DEL
X	86162347	86162348	ALU;TSD=null
X	86234440	86234654	DEL
X	86286771	86287222	DEL
X	86428039	86475920	DEL
X	86500636	86500637	LINE1;TSD=TT
X	86502244	86610468	DEL
X	86533991	86538705	DEL
X	86595640	86595641	ALU;TSD=AAGAAACTGAC
X	86918439	86918440	ALU;TSD=null
X	86927596	86927597	ALU;TSD=null
X	86932640	88168710	DEL
X	86990326	87382210	DEL
X	87230496	87230497	LINE1;TSD=null
X	87574694	87592766	DUP
X	87610575	87611920	DEL
X	87658699	87660937	DEL
X	87665507	87704064	DEL
X	87742017	87786924	DUP
X	87796096	87798129	DEL
X	87976556	87976557	ALU;TSD=AAATTCTTTTCT
X	88028291	88028292	ALU;TSD=null
X	88177670	88184564	DEL
X	88240799	88242821	DEL
X	88300568	88308148	DEL
X	88368129	88377202	DEL
X	88419336	88419442	DEL
X	88472162	88481000	DEL
X	88557153	88559909	DEL
X	88986665	88986666	LINE1;TSD=null
X	89005208	89131673	DUP
X	89033734	89041116	DEL
X	89320909	89321056	DEL
X	89337501	89338729	DEL
X	89448558	89496553	DEL
X	89578368	89580380	DEL
X	89893294	89911689	DEL
X	90188025	90188026	ALU;TSD=AAAAGAAACAAAAAATAG
X	90245430	90339633	DUP
X	90250870	90250946	DEL
X	90283367	90284081	DEL
X	90285432	90396308	DUP
X	90335646	90335647	SVA;TSD=null
X	90358348	90369288	DEL
X	90405133	90434055	CNV
X	90410866	90435898	DEL
X	90465927	90470833	DEL
X	90479371	90545090	DEL
X	90489412	90515019	DEL
X	90534152	90534153	ALU;TSD=AAGAGTGGCAAGACA
X	90660188	90661748	DEL
X	90726826	90726827	ALU;TSD=null
X	90760889	90760947	DEL
X	90952499	90957876	DEL
X	90969442	90979091	DEL
X	91030708	91030810	DEL
X	91367532	91368793	DEL
X	91469248	91485830	DEL
X	91556720	91556721	ALU;TSD=null
X	91678126	91680088	DEL
X	91692632	91692633	LINE1;TSD=GCTTTTGAGTCTT
X	91750760	91751796	DEL
X	91805281	91805282	ALU;TSD=null
X	91989147	91989148	ALU;TSD=AAAAAAATGCATGATTTT
X	92133621	92133900	DEL
X	92270809	92280493	DEL
X	92309557	92359120	DEL
X	92394511	92395983	DEL
X	92405974	92407886	DEL
X	92467551	92467552	ALU;TSD=CTATATATTTTT
X	92525640	92526108	DEL
X	92574087	92574165	DEL
X	92590148	92590149	ALU;TSD=AATATACCTACTTATT
X	92672301	92672363	DEL
X	92721911	92723931	DEL
X	92744087	92744088	ALU;TSD=CCCAATTTTCTT
X	92796294	92801506	DEL
X	92866378	92874876	DEL
X	93149072	93149956	DEL
X	93167765	93168395	DEL
X	93186810	93187985	DEL
X	93239768	93239936	DEL
X	93245047	93248285	DEL
X	93362085	93362086	ALU;TSD=AAAATTTAAAAAAAAA
X	93378325	93378391	DEL
X	93380988	93380989	ALU;TSD=null
X	93395877	93395878	ALU;TSD=null
X	93400917	93404725	DEL
X	93410378	93418060	DUP
X	93412420	93417693	DUP
X	93487027	93488017	DEL
X	93499017	93500419	DEL
X	93585400	93585401	LINE1;TSD=null
X	93671787	93671788	ALU;TSD=null
X	93689630	93689631	ALU;TSD=null
X	93729484	93730105	DEL
X	93742968	93743270	DEL
X	93878376	93878377	ALU;TSD=null
X	93963860	93971340	DEL
X	94092792	94098136	DUP
X	94310595	94347882	DUP
X	94345404	94394702	DUP
X	94525650	94551246	DEL
X	94577305	94578647	DEL
X	94584364	94584365	ALU;TSD=null
X	94590803	94595242	DEL
X	94603608	94632841	DUP
X	94632493	94632853	DEL
X	94642277	94651588	DEL
X	94665933	94665934	ALU;TSD=null
X	94698229	94701973	DEL
X	94718203	94728013	DEL
X	94788004	94988129	DEL
X	95014607	95019687	DEL
X	95031987	95037619	DEL
X	95039235	95039236	ALU;TSD=null
X	95050841	95051476	DEL
X	95145344	95145345	LINE1;TSD=null
X	95180925	95188834	CNV
X	95180991	95189063	DEL
X	95187026	95187027	ALU;TSD=null
X	95275776	95291113	DEL
X	95483886	95504382	DUP
X	95537355	95537356	ALU;TSD=TTACTATGCATATTTT
X	95631241	95631242	ALU;TSD=null
X	95775838	95775839	ALU;TSD=AGAAATAAGATGGGA
X	96140250	96143095	DEL
X	96168116	96168117	LINE1;TSD=TTCAAATATATTGCTTTC
X	96522261	96522262	ALU;TSD=null
X	96556140	96557208	DEL
X	96606710	96608737	DEL
X	96619122	96623156	DEL
X	96672352	96680820	DEL
X	96707626	96712886	DEL
X	96763369	96831761	DUP
X	96784800	96784801	ALU;TSD=null
X	96958277	96960074	DEL
X	96970300	96987034	DEL
X	96995240	96995241	ALU;TSD=CACCTGTTTTA
X	97063505	97064183	DEL
X	97145634	97151223	DEL
X	97167898	97168315	DEL
X	97278651	97281779	DEL
X	97365889	97366620	DEL
X	97379824	97379889	DEL
X	97811557	97812881	DEL
X	97842864	97842865	ALU;TSD=null
X	97938639	97940652	DEL
X	98013275	98017816	DEL
X	98111872	98116683	DEL
X	98225074	98225075	ALU;TSD=CATAGCTCATTTTTC
X	98262844	98267009	DEL
X	98264302	98264303	LINE1;TSD=GGTACTTATTCTT
X	98617505	98620548	CNV
X	98617516	98620599	DEL
X	98621706	98621774	DEL
X	98684605	98814968	DEL
X	98760378	98760608	DEL
X	98785810	98787896	DEL
X	98793108	98793214	DEL
X	98810839	98812807	DEL
X	99123367	99123368	LINE1;TSD=AAAAATTTTAGGACTT
X	99242032	99242033	ALU;TSD=null
X	99285552	99287068	DEL
X	99436064	99436117	DEL
X	99505153	99507489	DEL
X	99510840	99512856	DEL
X	99802682	99802737	DEL
X	99880024	99880118	DEL
X	100006797	100010311	DEL
X	100110945	100143035	DEL
X	100297960	100304194	DEL
X	100342156	100348677	DEL
X	100421325	100421929	DEL
X	100566274	100567622	DEL
X	100566804	100586945	DEL
X	100678121	100680576	DEL
X	100833020	100833675	DEL
X	100986014	100990225	DEL
X	101055330	101067156	DUP
X	101155257	101155309	DEL
X	101293973	101293974	ALU;TSD=AAAAAGCTTATCCACCACG
X	101304548	101307092	DEL
X	101359486	101359550	DEL
X	101364523	101364524	LINE1;TSD=null
X	101439260	101439261	LINE1;TSD=AAAACAAA
X	101832232	101846317	CNV
X	101833724	101843776	DUP
X	101958881	101961314	DEL
X	102256681	102267528	DUP
X	102272013	102277302	DEL
X	102277916	102283742	DEL
X	102333184	102383738	DUP
X	102363189	102363190	LINE1;TSD=AAAAGATAAAACTACA
X	102625247	102625248	ALU;TSD=GTACTAAAATATTTCT
X	102692005	102692006	ALU;TSD=CTTCTCAGCGTTTTTTATT
X	102778753	102786357	DEL
X	102780054	102780055	LINE1;TSD=TAAAAGTGACAGTAGTT
X	102808947	102826414	DEL
X	102856671	102858731	DEL
X	102862592	102862593	LINE1;TSD=null
X	103166571	103166572	ALU;TSD=TCCTC
X	103171518	103211637	DUP
X	103261177	103301346	DUP
X	103402414	103403027	DEL
X	103468249	103468316	DEL
X	103558687	103558990	DEL
X	103608577	103610573	DEL
X	103851252	103858785	DEL
X	104043583	104044601	DEL
X	104070748	104084901	DEL
X	104186065	104192446	CNV
X	104261023	104268501	DEL
X	104362703	104362704	LINE1;TSD=null
X	104389059	104394627	DEL
X	104521995	104522481	DEL
X	104522103	104522570	DEL
X	104573805	104587772	DEL
X	104740122	104740123	LINE1;TSD=null
X	104773532	104773533	ALU;TSD=null
X	104775072	104775073	ALU;TSD=null
X	104784764	104784970	DEL
X	104898178	104898179	ALU;TSD=GCTTAAATCTTTT
X	105116098	105118222	DEL
X	105191156	105191459	DEL_ALU
X	105204383	105208538	DEL
X	105268272	105333165	DUP
X	105330783	105356257	CNV
X	105334340	105334417	DEL
X	105347808	105402983	DUP
X	105462699	105598337	DUP
X	105477495	105478143	DEL
X	105521386	105530857	DEL
X	105522241	105528799	CNV
X	105543271	105553792	CNV
X	105581887	105582752	DEL
X	105614764	105629757	DUP
X	105633238	105765456	DUP
X	105661482	105661550	DEL
X	105807018	105807804	DEL
X	105839090	105839433	DEL
X	105886631	105886632	ALU;TSD=AAGAAATTTTTG
X	105938262	105949917	DEL
X	105938835	105939505	DEL
X	106094120	106099495	DEL
X	106289379	106295634	DEL
X	106332801	106338582	DEL
X	106341533	106342784	DEL
X	106530047	106606130	DUP
X	106585621	106585622	ALU;TSD=null
X	106595841	106595842	ALU;TSD=TCCA
X	106628964	106629030	DEL
X	106661474	106661475	ALU;TSD=GCCCTGCAACACTGCTTTCT
X	106663112	106680635	DEL
X	106744574	106744763	DEL_ALU
X	106746040	106746316	DEL
X	106782128	106782129	LINE1;TSD=null
X	106813487	106813488	ALU;TSD=GAAATGTTTACCAG
X	106835955	106835956	SVA;TSD=TA
X	106923102	106947675	CNV
X	106950594	106953072	DEL
X	106981593	106981941	DEL
X	107607940	107622940	DEL
X	107627881	107628640	DEL
X	107651526	107666981	CNV
X	107659539	107659628	DEL
X	107706519	107706520	LINE1;TSD=null
X	107740379	107740911	DEL
X	107846189	107846190	LINE1;TSD=null
X	108032658	108032714	DEL
X	108057999	108059415	DEL
X	108087559	108087624	DEL
X	108131503	108152012	DUP
X	108151864	108156184	DEL
X	108263263	108274338	DEL
X	108264721	108265102	DEL
X	108338192	108338193	ALU;TSD=null
X	108347263	108347264	ALU;TSD=null
X	108353221	108357383	DEL
X	108573616	108575348	DEL
X	108599123	108610357	DEL
X	108896709	108902199	DEL
X	108970568	108970569	SVA;TSD=null
X	109072643	109072758	DEL
X	109080843	109080897	DEL
X	109098154	109109836	DEL
X	109398184	109401375	DEL
X	109525724	109525725	LINE1;TSD=null
X	109591372	109591373	ALU;TSD=null
X	109730872	109731029	DEL
X	109835147	109835148	ALU;TSD=null
X	109938579	109942134	DEL
X	109981884	109984463	DEL
X	110094457	110095354	DEL
X	110125789	110125790	ALU;TSD=AAAAGAGTAGAGTTTTTG
X	110141273	110145053	DEL
X	110414618	110414678	DEL
X	110465342	110465394	DEL
X	110595844	110595941	DEL
X	110807787	110808204	DEL
X	111133753	111133816	DEL
X	111133909	111148477	DUP
X	111153256	111153863	DEL
X	111187088	111189328	DEL
X	111229571	111229572	LINE1;TSD=ATCCCAAATTCTT
X	111276718	111276719	ALU;TSD=TGTCTTTTT
X	111316672	111316673	SVA;TSD=null
X	111420997	111420998	ALU;TSD=null
X	111439435	111578797	DEL
X	111530247	111531377	DEL
X	111557758	111557759	LINE1;TSD=AGGACTTTT
X	111619957	111621780	DEL
X	111667087	111936181	DUP
X	111711651	111745323	CNV
X	111818173	111840496	DUP
X	111912510	111912674	DEL
X	111994369	111997226	DEL
X	112008322	112008380	DEL
X	112032217	112032218	LINE1;TSD=GGGTAGTTTCTTTAT
X	112052858	112053032	DEL
X	112149816	112152434	DEL
X	112161029	112168547	CNV
X	112169917	112169918	ALU;TSD=null
X	112351072	112351073	LINE1;TSD=null
X	112435261	112435262	ALU;TSD=null
X	112435952	112440586	DEL
X	112436185	112440675	CNV
X	112443765	112444514	DEL
X	112522502	112529227	DEL
X	112597965	112598247	DEL
X	112788553	112788681	DEL
X	112877015	112877346	DEL_ALU
X	112892922	113007167	DEL
X	113148602	113148706	DEL
X	113149721	113163457	DEL
X	113227860	113232251	DEL
X	113231092	113231093	ALU;TSD=null
X	113253298	113253376	DEL
X	113296407	113296905	DEL
X	113318427	113417625	CNV
X	113319208	113323151	DEL
X	113348190	113355238	CNV
X	113348331	113355364	DEL
X	113412632	113416467	DEL
X	113740508	113740509	ALU;TSD=AAAAAGTAGATATCTG
X	113775634	113776063	DEL
X	113879043	113879044	LINE1;TSD=null
X	113997499	113997563	DEL
X	114005906	114005907	ALU;TSD=null
X	114032058	114032059	ALU;TSD=CTGTGTCTTGAATTT
X	114052726	114056652	DEL
X	114056288	114056289	ALU;TSD=null
X	114059856	114424105	DUP
X	114214889	114214890	ALU;TSD=null
X	114249813	114249814	ALU;TSD=null
X	114286632	114288986	DEL
X	114505815	114505875	DEL
X	114542484	114544509	DEL
X	114565895	114566055	DEL
X	114670492	114670787	DEL_ALU
X	114709122	114709123	ALU;TSD=null
X	114716645	114727976	DUP
X	114777311	114777312	LINE1;TSD=AAGAAAAACCTGTT
X	114828525	114829308	DEL
X	114871817	114871818	ALU;TSD=null
X	114914154	114918367	DEL
X	114923940	114926524	DEL
X	115137999	115152939	DEL
X	115182224	115183321	DEL
X	115208182	115208291	DEL
X	115216698	115216887	DEL
X	115374652	115382115	DEL
X	115491990	115492298	DEL
X	115498834	115498888	DEL
X	115505238	115506128	DEL
X	115538506	115543278	DEL
X	115544162	115545105	DEL
X	115754331	115754332	ALU;TSD=null
X	115787921	115847146	DEL
X	115935706	116029510	DUP
X	115986169	115999068	DEL
X	116022095	116023545	DEL
X	116025285	116025286	LINE1;TSD=AA
X	116059928	116060015	DEL
X	116072766	116098248	CNV
X	116109172	116302603	DEL
X	116121000	116133556	DEL
X	116126382	116126467	DEL
X	116380300	116380301	ALU;TSD=null
X	116438555	116438556	ALU;TSD=AAGAGTGAATGCTG
X	116454345	116454664	DEL_ALU
X	116503005	116503235	DEL
X	116514316	116590069	DEL
X	116577188	116577462	DEL
X	116610705	116610765	DEL
X	116611894	116611944	DEL
X	116627646	116627647	ALU;TSD=AAGTAAAGTACTTATT
X	116720749	116722788	DEL
X	116754602	116757327	DEL
X	116808653	116808760	DEL
X	116838864	116838865	ALU;TSD=TAATAATAAATCAA
X	116842016	116842861	DEL
X	116914925	116915073	DEL
X	116918377	116928487	DEL
X	116930920	116930921	LINE1;TSD=null
X	116979882	116980149	DEL
X	117090030	117090031	ALU;TSD=null
X	117112561	117120259	DEL
X	117376106	117378799	DEL
X	117454126	117454959	DEL
X	117681322	117681409	DEL
X	117758976	117758977	LINE1;TSD=null
X	117976514	117979494	DEL
X	118203397	118203398	ALU;TSD=AAAATACAGACTT
X	118329554	118337961	DEL
X	118411168	118469125	DEL
X	118417565	118549627	DEL
X	118447777	118448592	DEL
X	118467590	118506357	CNV
X	118486258	118501298	DEL
X	118496267	118496394	DEL
X	118523301	118523365	DEL
X	118873967	118876560	DEL
X	118908738	118911083	DEL
X	118949933	118951131	DEL
X	119029253	119058207	CNV
X	119033750	119067483	CNV
X	119036694	119055824	CNV
X	119083053	119100549	DEL
X	119267168	119267169	SVA;TSD=null
X	119486851	119531340	DEL
X	119527856	119527857	ALU;TSD=TCTGTTGTGGTTTT
X	119684366	119684367	LINE1;TSD=AAAAGCCTTCCTGG
X	119839399	119843259	DEL
X	119892844	119892845	LINE1;TSD=CATGTCTTTCTTTT
X	119951623	119955626	DEL
X	120160584	120168106	DEL
X	120404314	120404315	ALU;TSD=null
X	120532520	120533981	DEL
X	120549880	120677946	DEL
X	120588422	120589335	DEL
X	120612508	120617824	CNV
X	120774102	120776600	DEL
X	120798244	120814269	DEL
X	120801576	120932895	DEL
X	120889998	120952700	DEL
X	120912381	120912382	ALU;TSD=null
X	120974952	120978752	DEL
X	121009409	121009467	DEL
X	121054411	121066916	CNV
X	121268952	121378787	DEL
X	121308064	121315515	DEL
X	121386279	121386519	DEL
X	121569332	121569333	ALU;TSD=GTCATCTACAATTTCTTTCTT
X	121581286	121581287	ALU;TSD=null
X	121760094	121760095	LINE1;TSD=null
X	121780153	121787535	DEL
X	121912788	121912868	DEL
X	121946120	121949175	CNV
X	121977572	121977677	DEL
X	122114608	122143121	DUP
X	122131124	122137898	CNV
X	122156938	122157080	DEL
X	122185498	122185850	DEL_ALU
X	122219030	122223855	DEL
X	122226272	122226273	LINE1;TSD=null
X	122235285	122236168	DEL
X	122315501	122316263	DEL
X	122316013	122316578	DEL
X	122359455	122359456	LINE1;TSD=null
X	122372569	122373422	DEL
X	122672378	122672379	ALU;TSD=GATCTCCATTTCTTT
X	122677452	122677453	ALU;TSD=null
X	122731648	122734078	DEL
X	122763589	122763676	DEL
X	122853439	122860363	DEL
X	122881186	122881187	ALU;TSD=null
X	122922879	122922880	SVA;TSD=AGAAAGTAAGATAACAG
X	122951245	122952841	DEL
X	122972835	122973660	DEL
X	122977609	122985456	DEL
X	122987653	122992301	DEL
X	122999138	123002941	DEL
X	123059168	123067187	DEL
X	123154776	123155087	DEL
X	123606205	123606206	ALU;TSD=AAAAAAAAAAAAAAAAAAAAAA
X	123611800	123611801	LINE1;TSD=null
X	123787686	123789168	DEL
X	123799417	123799498	DEL
X	123848395	123848396	LINE1;TSD=null
X	123921260	123921261	LINE1;TSD=CTATACACAGAATTT
X	123988402	123988480	DEL
X	123992125	123993412	DEL
X	124090199	124097209	DEL
X	124115707	124116136	DEL
X	124175500	124177908	DEL
X	124234123	124236345	DEL
X	124384088	124384089	LINE1;TSD=null
X	124516877	124516878	ALU;TSD=null
X	124522563	124528065	DEL
X	124553816	124554440	DEL
X	124591705	124593386	DEL
X	124678004	124689491	DEL
X	124904994	124988751	DEL
X	124991759	124995155	DEL
X	124992814	124993318	DEL
X	125077710	125077946	DEL_LINE1
X	125092337	125131442	CNV
X	125092796	125130906	DEL
X	125101247	125290547	DEL
X	125103522	125119972	CNV
X	125269140	125271067	DEL
X	125372640	125372765	DEL
X	125392060	125392136	DEL
X	125487116	125487117	LINE1;TSD=ATCCAAAGCTT
X	125560556	125560557	ALU;TSD=null
X	125778805	125778806	ALU;TSD=null
X	125850344	125852884	DEL
X	125857686	125857687	LINE1;TSD=null
X	125891662	125926810	DEL
X	125939424	125944079	DEL
X	125941756	125943170	DEL
X	125960623	125960624	ALU;TSD=AAAAAACATATTAGTA
X	125987965	125990921	DEL
X	125998504	126118892	DEL
X	126122627	126123671	DEL
X	126290693	126290694	ALU;TSD=TTATTTTTACAATTCTT
X	126330194	126331264	DEL
X	126581696	126581697	LINE1;TSD=null
X	126583432	126583433	ALU;TSD=AAAATATACTA
X	126597734	126602382	DEL
X	126759390	126886628	DEL
X	126779103	126779104	ALU;TSD=null
X	126852159	126947127	DEL
X	126852500	126852551	DEL
X	126901433	126909608	DEL
X	126945026	127075666	DEL
X	127026713	127026788	DEL
X	127115869	127152716	DEL
X	127142095	127241872	DEL
X	127356141	127356142	ALU;TSD=AAAAATTAAGGTAACTCTGC
X	127369849	127511416	DEL
X	127391777	127427976	DEL
X	127412105	127412106	LINE1;TSD=null
X	127415839	127432267	DEL
X	127452736	127456285	DEL
X	127498484	127498582	DEL
X	127612684	127612685	ALU;TSD=null
X	127705419	127706892	DEL
X	127716133	127757765	DEL
X	127763536	127763537	ALU;TSD=null
X	127815549	127816839	DEL
X	127943444	127943542	DEL
X	128041065	128041132	DEL
X	128046284	128046401	DEL
X	128046771	128070740	DUP
X	128216094	128216148	DEL
X	128269800	128269801	ALU;TSD=null
X	128320396	128327515	DEL
X	128348971	128349037	DEL
X	128375466	128378855	DEL
X	128379356	128382898	DEL
X	128499485	128499539	DEL
X	128500439	128502436	DEL
X	128661031	128665656	DEL
X	128794882	128795189	DEL
X	128927263	128927264	ALU;TSD=AGAATTTC
X	129025580	129027905	DEL
X	129072766	129075856	DEL
X	129079658	129085507	DEL
X	129094010	129096747	DEL
X	129503580	129503581	LINE1;TSD=null
X	129511350	129524045	DEL
X	129511568	129523970	CNV
X	129511736	129531248	DUP
X	129525281	129525282	LINE1;TSD=CACATATCTCTT
X	129570944	129597534	DUP
X	129600508	129600509	LINE1;TSD=null
X	129600830	129606538	DEL
X	129636757	129644089	DEL
X	129667605	129668877	DEL
X	129860417	129870832	DEL
X	130005063	130017222	DEL
X	130136840	130136841	LINE1;TSD=null
X	130153667	130157946	DEL
X	130224846	130224847	ALU;TSD=null
X	130230734	130230735	SVA;TSD=GGTGCTAGTCCTTCTTT
X	130271072	130271136	DEL
X	130274755	130274825	DEL
X	130294764	130303951	DEL
X	130377774	130378680	DEL
X	130419609	130499134	DUP
X	130489210	130572918	CNV
X	130529213	130530823	DEL
X	130540495	130540496	LINE1;TSD=null
X	130546244	130547839	DEL
X	130760146	130811378	DUP
X	130778548	130793457	DEL
X	130789467	130847286	DUP
X	130838070	130839578	DEL
X	130838636	130868183	DUP
X	130921955	130921956	ALU;TSD=GTCACATTTTCTT
X	131005357	131008631	DEL
X	131089382	131089611	DEL
X	131138014	131138099	DEL
X	131303138	131444024	DUP
X	131473061	131473278	DEL
X	131509268	131509620	DEL
X	131694553	131695226	DEL
X	131695169	131695170	LINE1;TSD=null
X	131715059	131715696	DEL
X	131744890	131745334	DEL
X	131905529	131911902	DUP
X	131913728	131914343	DEL
X	131920802	131927249	DEL
X	131939439	131941566	DEL
X	131951321	131958840	DEL
X	132221059	132221060	LINE1;TSD=null
X	132537103	132537908	DEL
X	132658201	132663275	DEL
X	132769210	132769480	DEL
X	133004651	133004652	ALU;TSD=TAAAATGAGGATCTT
X	133086929	133086930	LINE1;TSD=null
X	133295126	133298458	DEL
X	133347721	133352266	DEL
X	133347752	133352160	CNV
X	133367997	133368233	DEL
X	133394234	133397211	DEL
X	133520874	133523028	DEL
X	133669226	133669299	DEL
X	133864428	133865788	DEL
X	134006110	134006111	ALU;TSD=null
X	134161502	134162053	DEL_LINE1
X	134234489	134323535	DUP
X	134296467	134343085	DUP
X	134309593	134310565	DEL
X	134329722	134507064	DUP
X	134390717	134438346	CNV
X	134450378	134453504	DEL
X	134512154	134566069	DUP
X	134519685	134522284	DEL
X	134532108	134535566	DEL
X	134641990	134648586	DEL
X	134652695	134790974	DUP
X	134748495	134791065	DUP
X	134756231	134773985	DEL
X	134776925	134776926	ALU;TSD=null
X	134810690	134828847	DUP
X	134813415	134813470	DEL
X	134815179	134851699	DUP
X	134891974	134910593	DUP
X	134903435	134948570	DUP
X	134905005	134916506	DUP
X	134983163	134993487	DEL
X	134994786	135022311	DUP
X	135052293	135052832	DEL
X	135105322	135105372	DEL
X	135115762	135115821	DEL
X	135152197	135152198	ALU;TSD=CAGTGCAGCACATATCT
X	135157982	135158313	DEL_ALU
X	135217358	135220852	DEL
X	135299187	135302198	DEL
X	135326848	135326972	DEL
X	135555215	135555305	DEL
X	135563175	135563311	DEL
X	135769569	135769570	LINE1;TSD=AAGAAGATACATTAAC
X	135939455	135943733	DEL
X	135994495	136001854	DEL
X	136013968	136013969	ALU;TSD=null
X	136025714	136025715	ALU;TSD=GGAAATGTCAGCTCTTTTC
X	136185681	136194340	DEL
X	136185841	136190378	DEL
X	136344615	136349822	DEL
X	136349840	136349841	ALU;TSD=AAAAGCTCTGGTTGGTGGA
X	136719323	136722865	DEL
X	136957297	136957298	ALU;TSD=GATGAAGTGTGATTT
X	137172446	137172505	DEL
X	137234502	137234592	DEL
X	137241822	137248008	DEL
X	137271183	137271406	DEL
X	137350678	137377835	DUP
X	137711562	137711945	DEL
X	138122571	138130736	DEL
X	138146418	138146696	DEL_ALU
X	138154195	138205844	DEL
X	138157986	138158176	DEL_ALU
X	138261197	138276559	DEL
X	138350817	138350939	DEL
X	138384894	138385220	DEL_ALU
X	138420669	138435943	DEL
X	138438676	138438755	DEL
X	138479906	138479907	ALU;TSD=null
X	138500881	138524083	DUP
X	138508519	138509925	DEL
X	138744482	138744483	ALU;TSD=CCCCTATAAAGATTTT
X	138792013	138951270	DUP
X	138934761	139013426	DUP
X	138941963	138942285	DEL_ALU
X	139023159	139062252	DUP
X	139045796	139045929	DEL
X	139091026	139093375	DEL
X	139113319	139125266	DUP
X	139134371	139142432	DEL
X	139142107	139144002	DEL
X	139494778	139503081	DEL
X	139494849	139512613	DEL
X	139502739	139503830	DEL
X	139502775	139515871	DEL
X	139502853	139503094	DEL
X	139760537	139771719	DEL
X	139853445	139853446	ALU;TSD=AAAAGACAAAAGCA
X	140028196	140034012	DEL
X	140029452	140029502	DEL
X	140039288	140078780	CNV
X	140292652	140335017	CNV
X	140322707	140657766	DEL
X	140334291	140560547	CNV
X	140375697	140375809	DEL
X	140396601	140396602	ALU;TSD=null
X	140476728	140479230	DEL
X	140667978	140774647	CNV
X	140671851	140785735	DEL
X	140789921	140855079	CNV
X	140792712	140835294	DEL
X	140792830	140834797	CNV
X	140887255	140887344	DEL
X	140957172	140958534	DEL
X	140957745	140959430	DEL
X	141084211	141086866	DEL
X	141165498	141165964	DEL
X	141197840	141197841	LINE1;TSD=TTATTGCTGCTTGCTTATTTCT
X	141204319	141204320	LINE1;TSD=TTGGTCTTAGTTCT
X	141232859	141232977	DEL
X	141385372	141385373	ALU;TSD=null
X	141469740	141469741	LINE1;TSD=null
X	141583593	141583594	ALU;TSD=AT
X	141843049	141860020	DEL
X	141854565	141860145	DEL
X	141893474	141895729	DEL
X	141924785	141924915	DEL
X	141980345	141993319	DEL
X	142004125	142004175	DEL
X	142051221	142051283	DEL
X	142197943	142198062	DEL
X	142297932	142302367	DEL
X	142342209	142343067	DEL
X	142369685	142515399	CNV
X	142499147	142499148	ALU;TSD=null
X	142600307	142798883	DEL
X	142833364	142833487	DEL
X	142885690	142885691	ALU;TSD=ATAAATATAAAAGTGTTATTAC
X	142926126	142926127	ALU;TSD=TGCTCTTTTTTGTT
X	142958569	142958570	ALU;TSD=null
X	143063721	143063896	DEL
X	143329808	143329809	ALU;TSD=null
X	143420722	143420723	ALU;TSD=AAAACAATGAGGTC
X	143628378	143637701	DEL
X	143657026	143659596	DEL
X	143704684	143704685	LINE1;TSD=GAAAATCCTGCTTGCC
X	143717905	143724245	DEL
X	143723351	143723352	ALU;TSD=null
X	143778329	143778386	DEL
X	143843274	143843581	DEL_ALU
X	144060275	144060276	ALU;TSD=null
X	144130240	144130241	ALU;TSD=null
X	144180262	144190713	DEL
X	144217923	144309451	DEL
X	144299026	144353484	DEL
X	144322610	144323238	DEL
X	144326342	144482243	DEL
X	144365176	144397521	CNV
X	144422074	144424508	DEL
X	144443230	144443231	ALU;TSD=TCAATGACTTTT
X	144454642	144454828	DEL
X	144887118	144887538	DEL
X	145052104	145055137	DEL
X	145090496	145091939	DEL
X	145116600	145116684	DEL
X	145124596	145135079	DEL
X	145221989	145237539	DEL
X	145237921	145237922	LINE1;TSD=null
X	145399382	145401050	DEL
X	145404316	145422276	DEL
X	145509550	145510407	DEL
X	145526507	145526819	DEL_ALU
X	145539119	145539120	ALU;TSD=AAAACTTCACCTATC
X	145727200	145727288	DEL
X	145758649	145758650	ALU;TSD=null
X	145882153	145967775	DUP
X	146038209	146041733	DEL
X	146119815	146131909	CNV
X	146169503	146169738	DEL
X	146179855	146185929	DEL
X	146253811	146254811	DEL
X	146340753	146346040	DEL
X	146374337	146381726	DEL
X	146374388	146378041	DEL
X	146425255	146426939	DEL
X	146430505	146430562	DEL
X	146459618	146459619	LINE1;TSD=null
X	146559239	146559345	DEL_LINE1
X	146570325	146572510	DEL
X	146683080	146683534	DEL
X	146756968	146757031	DEL
X	146782399	146783836	DEL
X	146843691	146849792	DEL
X	146849495	146849811	DEL
X	146849941	146850021	DEL
X	146851055	146851056	ALU;TSD=AATGGTATTGTTTTT
X	146983498	146985520	DEL
X	147037833	147037834	ALU;TSD=null
X	147192263	147203418	DEL
X	147194081	147194082	ALU;TSD=AAATATTAACTTGTA
X	147434332	147434405	DEL
X	147494550	147494551	ALU;TSD=null
X	147509695	147511237	DEL
X	147948687	147955501	DEL
X	148287176	148374732	DUP
X	148303489	148303585	DEL
X	148539115	148539116	ALU;TSD=AGAACTCTC
X	148579845	148630997	DUP
X	148640196	148654619	CNV
X	148685833	148739727	CNV
X	148762813	148775448	DUP
X	148771685	148811274	DUP
X	148803850	148831837	DEL
X	148831648	148836056	DEL
X	148848506	148902086	CNV
X	148957595	148998958	CNV
X	149006503	149006571	DEL
X	149084379	149084667	DEL
X	149236087	149239411	DEL
X	149240944	149265118	DUP
X	149379029	149379030	LINE1;TSD=null
X	149451325	149451326	ALU;TSD=AACAAGATAGCGAGAGGTTG
X	149494721	149494722	ALU;TSD=null
X	149549314	149549368	DEL
X	149551136	149551472	DEL_ALU
X	149927786	149928796	DEL
X	150268163	150270796	DEL
X	150293934	150295714	DEL
X	150317479	150317600	DEL
X	150386183	150386184	ALU;TSD=null
X	150420005	150420375	DEL
X	150537389	150537390	ALU;TSD=null
X	150585730	150586802	DEL
X	150707071	150712355	DEL
X	150711379	150712579	DEL
X	150826291	150834971	DUP
X	150876871	150878517	DEL
X	150934100	150939459	DEL
X	150997048	150997275	DEL
X	151218769	151218770	ALU;TSD=null
X	151261523	151261524	ALU;TSD=null
X	151345023	151345024	LINE1;TSD=null
X	151473664	151477031	DEL
X	151565366	151566720	DEL
X	151759240	151763151	DEL
X	151831777	151831778	ALU;TSD=GATTTTGTTCTTTCTT
X	151982308	151982367	DEL
X	151982765	151982839	DEL
X	152001805	152001806	ALU;TSD=AAAAGTTATATGTGG
X	152048325	152223267	DUP
X	152093580	152101608	DEL
X	152103859	152107426	CNV
X	152104023	152107459	DEL
X	152105370	152107509	DEL
X	152107192	152107456	DEL
X	152342861	152367832	DUP
X	152350177	152372400	DUP
X	152350641	152351384	DEL
X	152360625	152367335	DEL
X	152413932	152529446	DUP
X	152414940	152476204	DUP
X	152746729	152746781	DEL
X	152803047	152804209	DEL
X	152807507	152807578	DEL
X	152863846	152867635	DEL
X	152883216	152883217	ALU;TSD=AAGAAACTATTGCCTG
X	152895321	152896285	DEL
X	152943315	152943369	DEL
X	153030469	153035081	DEL
X	153255724	153262895	DEL
X	153413538	153414996	DEL
X	153622445	153624732	DEL
X	153629278	153629591	DEL
X	153630779	153630975	DEL
X	153635023	153636375	DEL
X	153728656	153733851	DEL
X	153733651	153733836	DEL
X	153733755	153733868	DEL
X	153733767	153734279	DEL
X	153733776	153733831	DEL
X	153819664	153830620	CNV
X	153820981	153914845	DUP
X	153917072	153917073	SVA;TSD=null
X	154008834	154009031	DEL
X	154014130	154014233	DEL
X	154017323	154017395	DEL
X	154110804	154607929	DEL
X	154119649	154276173	DUP
X	154265736	154273101	DEL
X	154265886	154272944	CNV
X	154275425	154275426	ALU;TSD=null
X	154285159	154285433	DEL
X	154285270	154285819	DEL
X	154285287	154285339	DEL
X	154285781	154285841	DEL
X	154298802	154384198	DUP
X	154313357	154314049	DEL
X	154314369	154314535	DEL
X	154385298	154404162	DEL
X	154386087	154420956	CNV
X	154402183	154449882	DUP
X	154403901	154403987	DEL
X	154403956	154404042	DEL
X	154485925	154486943	DEL
X	154511616	154511617	ALU;TSD=null
X	154553899	154556947	DEL
X	154632079	154645930	DEL
X	154658693	154683572	DUP
X	154726219	154770591	DUP
X	154762277	154778295	CNV
X	154762298	154778228	DEL
X	154766103	154778119	CNV
X	154771110	154778240	DEL
X	154771291	154781130	DEL
X	154776815	154786039	DEL
X	154778111	154782566	DEL
X	154778177	154778659	DEL
X	154781652	154787659	DEL
X	154790161	154790501	DEL
X	154790197	154802370	DEL
X	154790201	154790202	LINE1;TSD=null
X	154798201	154803718	DEL
X	154867954	154868024	DEL
X	154876376	154880988	DEL
X	154882092	154893477	DEL
X	154909099	154918556	DEL
X	154909888	154909889	ALU;TSD=null
X	154916967	154933972	DEL
X	154918469	154921719	DEL
X	154957224	154965634	DEL
X	155040763	155047741	DEL
X	155090084	155092227	DEL
X	155146395	155148983	DEL


================================================
FILE: tests/AnnotSV/test_02_HG00096/input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.vcf
================================================
##fileformat=VCFv4.1
##FILTER=<ID=PASS,Description="All filters passed">
##INFO=<ID=TSD,Number=1,Type=String,Description="Precise Target Site Duplication for bases, if unknown, value will be NULL">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=MSTART,Number=1,Type=Integer,Description="Mitochondrial start coordinate of inserted sequence">
##INFO=<ID=MLEN,Number=1,Type=Integer,Description="Estimated length of mitochondrial insert">
##INFO=<ID=MEND,Number=1,Type=Integer,Description="Mitochondrial end coordinate of inserted sequence">
##INFO=<ID=MEINFO,Number=4,Type=String,Description="Mobile element info of the form NAME,START,END<POLARITY; If there is only 5' OR 3' support for this call, will be NULL NULL for START and END">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=END,Number=1,Type=Integer,Description="End coordinate of this variant">
##INFO=<ID=CS,Number=1,Type=String,Description="Source call set.">
##INFO=<ID=MC,Number=.,Type=String,Description="Merged calls.">
##INFO=<ID=AF,Number=A,Type=Float,Description="Estimated allele frequency in the range (0,1)">
##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of samples with data">
##INFO=<ID=EAS_AF,Number=A,Type=Float,Description="Allele frequency in the EAS populations calculated from AC and AN, in the range (0,1)">
##INFO=<ID=EUR_AF,Number=A,Type=Float,Description="Allele frequency in the EUR populations calculated from AC and AN, in the range (0,1)">
##INFO=<ID=AFR_AF,Number=A,Type=Float,Description="Allele frequency in the AFR populations calculated from AC and AN, in the range (0,1)">
##INFO=<ID=AMR_AF,Number=A,Type=Float,Description="Allele frequency in the AMR populations calculated from AC and AN, in the range (0,1)">
##INFO=<ID=SAS_AF,Number=A,Type=Float,Description="Allele frequency in the SAS populations calculated from AC and AN, in the range (0,1)">
##INFO=<ID=SITEPOST,Number=1,Type=Float,Description="Site Median posterior probability from MVNcall.">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##contig=<ID=1,length=249250621>
##contig=<ID=2,length=243199373>
##contig=<ID=3,length=198022430>
##contig=<ID=4,length=191154276>
##contig=<ID=5,length=180915260>
##contig=<ID=6,length=171115067>
##contig=<ID=7,length=159138663>
##contig=<ID=8,length=146364022>
##contig=<ID=9,length=141213431>
##contig=<ID=10,length=135534747>
##contig=<ID=11,length=135006516>
##contig=<ID=12,length=133851895>
##contig=<ID=13,length=115169878>
##contig=<ID=14,length=107349540>
##contig=<ID=15,length=102531392>
##contig=<ID=16,length=90354753>
##contig=<ID=17,length=81195210>
##contig=<ID=18,length=78077248>
##contig=<ID=19,length=59128983>
##contig=<ID=20,length=63025520>
##contig=<ID=21,length=48129895>
##contig=<ID=22,length=51304566>
##contig=<ID=X,length=155270560>
##contig=<ID=Y,length=59373566>
##contig=<ID=MT,length=16569>
##INFO=<ID=AC,Number=.,Type=Integer,Description="Allele count in genotypes">
##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG00096
1	3995268	ALU_umary_ALU_5	N	<INS:ME:ALU>	.	.	AC=3934;AF=0.785543;AFR_AF=0.7806;AMR_AF=0.804;AN=5008;CS=ALU_umary;EAS_AF=0.7609;EUR_AF=0.7992;MEINFO=AluUndef,89,280,-;NS=2504;SAS_AF=0.7904;SITEPOST=0.9891;SVLEN=191;SVTYPE=ALU;TSD=null	GT	1|1
1	4204667	DEL_pindel_129	ACACCATTATCATTATCATCACCACCACCACCACCACCACACCACCACCAT	A	.	PASS	AC=2432;AF=0.485623;AFR_AF=0.4902;AMR_AF=0.4841;AN=5008;CS=DEL_pindel;EAS_AF=0.4841;END=4204717;EUR_AF=0.4841;NS=2504;SAS_AF=0.4836;SITEPOST=0.9999;SVTYPE=DEL	GT	1|0
1	6434482	BI_GS_DEL1_B1_P0007_316	G	<CN0>	100	PASS	AC=22;AF=0.00439297;AFR_AF=0.0008;AMR_AF=0.0029;AN=5008;CIEND=-43,43;CIPOS=-43,43;CS=DEL_union;EAS_AF=0.002;END=6445321;EUR_AF=0.0099;NS=2504;SAS_AF=0.0072;SVTYPE=DEL	GT	1|0
1	6438160	BI_GS_DEL1_B1_P0007_317	G	<CN0>	100	PASS	AC=30;AF=0.00599042;AFR_AF=0.0008;AMR_AF=0.0029;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.001;END=6445897;EUR_AF=0.0169;MC=BI_GS_DEL1_B4_P0007_116,UW_VH_3195,EM_DL_DEL00475,YL_CN_GBR_40,UW_VH_15793;NS=2504;SAS_AF=0.0092;SVTYPE=DEL	GT	1|0
1	7570074	BI_GS_DEL1_B5_P0008_654	A	<CN0>	100	PASS	AC=810;AF=0.161741;AFR_AF=0.0658;AMR_AF=0.1153;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2857;END=7571521;EUR_AF=0.1928;MC=SI_BD_86,UW_VH_6262,YL_CN_TSI_23,UW_VH_1671,EM_DL_DEL1004393,YL_CN_JPT_38;NS=2504;SAS_AF=0.1646;SVTYPE=DEL	GT	0|1
1	8200707	DUP_gs_CNV_1_8200707_8211256	G	<CN2>	.	PASS	AC=44;AF=0.00878594;AFR_AF=0.0015;AMR_AF=0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.001;END=8211256;EUR_AF=0.0308;NS=2504;SAS_AF=0.0041;SITEPOST=0.9888;SVTYPE=DUP	GT	0|1
1	10482499	UW_VH_0	G	<CN0>	100	PASS	AC=1649;AF=0.329273;AFR_AF=0.4092;AMR_AF=0.3458;AN=5008;CIEND=0,468;CIPOS=-504,0;CS=DEL_union;EAS_AF=0.2837;END=10483790;EUR_AF=0.3091;MC=SI_BD_118,EM_DL_DEL1005915,YL_CN_ASW_57,YL_CN_STU_30,YL_CN_ESN_29,YL_CN_JPT_45,YL_CN_PEL_36,YL_CN_GIH_28;NS=2504;SAS_AF=0.2771;SVTYPE=DEL	GT	1|0
1	11682873	UW_VH_58	T	<CN0>	100	PASS	AC=2532;AF=0.505591;AFR_AF=0.3313;AMR_AF=0.6484;AN=5008;CIEND=0,435;CIPOS=-575,0;CS=DEL_union;EAS_AF=0.3929;END=11683189;EUR_AF=0.7803;MC=BI_GS_DEL1_B5_P0012_700;NS=2504;SAS_AF=0.4734;SVTYPE=DEL	GT	0|1
1	17026064	DUP_gs_CNV_1_17026064_17052112	G	<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=1463,2202,294,57;AF=0.292133,0.439696,0.0587061,0.0113818;AFR_AF=0.2829,0.4327,0.0522,0.0318;AMR_AF=0.304,0.4193,0.0389,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.1667,0.631,0.13,0.0079;END=17052112;EUR_AF=0.3588,0.3698,0.0368,0.002;NS=2504;SAS_AF=0.3569,0.3384,0.0307,0.002;SITEPOST=0.97635;SVTYPE=CNV	GT	2|1
1	17208619	DUP_gs_CNV_1_17208619_17225378	G	<CN2>,<CN3>	.	PASS	AC=2399,70;AF=0.479034,0.0139776;AFR_AF=0.5265,0.0378;AMR_AF=0.4438,0.0144;AN=5008;CS=DUP_gs;EAS_AF=0.6161,0.002;END=17225378;EUR_AF=0.4642,0.005;NS=2504;SAS_AF=0.3139,0.0031;SITEPOST=0.9999;SVTYPE=CNV	GT	1|0
1	17238417	DUP_gs_CNV_1_17238417_17266696	G	<CN2>,<CN3>	.	PASS	AC=2410,75;AF=0.48123,0.014976;AFR_AF=0.528,0.0408;AMR_AF=0.451,0.0115;AN=5008;CS=DUP_gs;EAS_AF=0.6161,0.004;END=17266696;EUR_AF=0.4622,0.007;NS=2504;SAS_AF=0.32,0.002;SITEPOST=1;SVTYPE=CNV	GT	1|0
1	17263114	DUP_gs_CNV_1_17263114_17273513	C	<CN2>,<CN3>	.	PASS	AC=2399,79;AF=0.479034,0.0157748;AFR_AF=0.5272,0.0424;AMR_AF=0.4438,0.0173;AN=5008;CS=DUP_gs;EAS_AF=0.6081,0.004;END=17273513;EUR_AF=0.4632,0.006;NS=2504;SAS_AF=0.3221,0.001;SITEPOST=0.9999;SVTYPE=CNV	GT	1|0
1	17676165	BI_GS_DEL1_B5_P0018_582	A	<CN0>	100	PASS	AC=1704;AF=0.340256;AFR_AF=0.0446;AMR_AF=0.389;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5714;END=17677662;EUR_AF=0.3608;MC=YL_CN_BEB_49,EM_DL_DEL1008500,YL_CN_JPT_76,YL_CN_PEL_71,YL_CN_IBS_51,YL_CN_CEU_86,YL_CN_TSI_52,UW_VH_60;NS=2504;SAS_AF=0.4458;SVTYPE=DEL	GT	0|1
1	17684764	DEL_pindel_317	TATAAAAATATATTTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGGTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCCGGAGGCTGAGGCAGGAGAATGGCGTGAACTCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGACGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAATAATAAAA	T	.	PASS	AC=3120;AF=0.623003;AFR_AF=0.7156;AMR_AF=0.5836;AN=5008;CS=DEL_pindel;EAS_AF=0.6567;END=17685086;EUR_AF=0.5795;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.5358;SITEPOST=0.9569;SVTYPE=DEL_ALU	GT	1|1
1	20864015	BI_GS_DEL1_B5_P0021_1033	T	<CN0>	100	PASS	AC=255;AF=0.0509185;AFR_AF=0.003;AMR_AF=0.049;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0476;END=20864732;EUR_AF=0.1123;MC=UW_VH_62,SI_BD_202;NS=2504;SAS_AF=0.0573;SVTYPE=DEL	GT	1|0
1	21786418	BI_GS_DEL1_B3_P0022_20	T	<CN0>	100	PASS	AC=3575;AF=0.713858;AFR_AF=0.4289;AMR_AF=0.7723;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8552;END=21786695;EUR_AF=0.7296;NS=2504;SAS_AF=0.8957;SVTYPE=DEL	GT	1|0
1	23981142	ALU_umary_ALU_69	C	<INS:ME:ALU>	.	.	AC=560;AF=0.111821;AFR_AF=0.1135;AMR_AF=0.1167;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.1938;MEINFO=AluYa4_5,1,270,+;NS=2504;SAS_AF=0.135;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AACAGATGGGGCATC	GT	1|0
1	25592642	DUP_gs_CNV_1_25592642_25661222	T	<CN0>,<CN2>	.	PASS	AC=1032,11;AF=0.20607,0.00219649;AFR_AF=0.1581,0.0038;AMR_AF=0.2176,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.0466,0.002;END=25661222;EUR_AF=0.3996,0.002;MC=SI_BD_239,YL_CN_BEB_62;NS=2504;SAS_AF=0.228,0.001;SITEPOST=1;SVTYPE=CNV	GT	1|0
1	25688926	DUP_gs_CNV_1_25688926_25700415	G	<CN0>,<CN2>	.	PASS	AC=101,12;AF=0.0201677,0.00239617;AFR_AF=0.0492,0.0015;AMR_AF=0.013,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.0169,0.004;END=25700415;EUR_AF=0.007,0.001;NS=2504;SAS_AF=0.0031,0.0041;SITEPOST=1;SVTYPE=CNV	GT	0|1
1	27804112	DEL_pindel_373	TTAAAAATAAATAAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCTACAGAGCGAGACTCCGTCTCAAAAAAAAAAAATAAATAAATAAAAAAAAAAA	T	.	PASS	AC=1160;AF=0.231629;AFR_AF=0.3132;AMR_AF=0.0533;AN=5008;CS=DEL_pindel;EAS_AF=0.3413;END=27804441;EUR_AF=0.1292;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2403;SITEPOST=0.9992;SVTYPE=DEL_ALU	GT	1|0
1	30298152	DEL_pindel_400	CGCACACACACACGTACTCACACCCATGCGCACACATACATATTCACACACAT	C	.	PASS	AC=799;AF=0.159545;AFR_AF=0.031;AMR_AF=0.2277;AN=5008;CS=DEL_pindel;EAS_AF=0.13;END=30298204;EUR_AF=0.2495;NS=2504;SAS_AF=0.2229;SITEPOST=0.9979;SVTYPE=DEL	GT	0|1
1	35101427	BI_GS_DEL1_B2_P0036_63	C	<CN0>	100	PASS	AC=585;AF=0.116813;AFR_AF=0.1301;AMR_AF=0.1585;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0645;END=35111985;EUR_AF=0.1769;MC=UW_VH_6616,YL_CN_CHB_108,EM_DL_DEL02163,UW_VH_2777;NS=2504;SAS_AF=0.0613;SVTYPE=DEL	GT	1|0
1	35627104	BI_GS_DEL1_B3_P0036_21	T	<CN0>	100	PASS	AC=3130;AF=0.625;AFR_AF=0.4788;AMR_AF=0.6484;AN=5008;CIEND=-41,42;CIPOS=-41,42;CS=DEL_union;EAS_AF=0.3433;END=35627431;EUR_AF=0.8976;NS=2504;SAS_AF=0.816;SVTYPE=DEL	GT	1|1
1	36733282	BI_GS_DEL1_B3_P0037_15	T	<CN0>	100	PASS	AC=3956;AF=0.789936;AFR_AF=0.5129;AMR_AF=0.853;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9435;END=36733515;EUR_AF=0.8757;NS=2504;SAS_AF=0.8732;SVTYPE=DEL	GT	1|1
1	36749217	DEL_pindel_483	TGCTGTTTATTTCAGATGAGTATCTAGAATCCTTGTCTTAGATGAATTGATTA	T	.	PASS	AC=2248;AF=0.448882;AFR_AF=0.4077;AMR_AF=0.4683;AN=5008;CS=DEL_pindel;EAS_AF=0.4444;END=36749269;EUR_AF=0.4622;NS=2504;SAS_AF=0.4816;SITEPOST=0.9997;SVTYPE=DEL	GT	0|1
1	37215810	ALU_umary_ALU_104	A	<INS:ME:ALU>	.	.	AC=1217;AF=0.243011;AFR_AF=0.0545;AMR_AF=0.2695;AN=5008;CS=ALU_umary;EAS_AF=0.2688;EUR_AF=0.3767;MEINFO=AluUndef,1,278,+;NS=2504;SAS_AF=0.3149;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAAAAATTAAATTTA	GT	1|0
1	37816478	UW_VH_11167	A	<CN0>	100	PASS	AC=1956;AF=0.390575;AFR_AF=0.1089;AMR_AF=0.5476;AN=5008;CIEND=0,446;CIPOS=-475,0;CS=DEL_union;EAS_AF=0.3562;END=37816722;EUR_AF=0.5298;MC=UW_VH_1992,BI_GS_DEL1_B2_P0038_788;NS=2504;SAS_AF=0.5521;SVTYPE=DEL	GT	1|1
1	43857455	DEL_pindel_537	TAAAAAAATGAAACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCTGTCTCTACTAAAAAAAATACAAAAAATTAGCTGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATTGTGCCACTGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2415;AF=0.482228;AFR_AF=0.5537;AMR_AF=0.5173;AN=5008;CS=DEL_pindel;EAS_AF=0.4296;END=43857791;EUR_AF=0.5159;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.3804;SITEPOST=0.994;SVTYPE=DEL_ALU	GT	0|1
1	44059290	INV_delly_INV00003623	A	<INV>	.	PASS	AC=3575;AF=0.713858;AFR_AF=0.6407;AMR_AF=0.6441;AN=5008;CIEND=-61,61;CIPOS=-61,61;CS=INV_delly;EAS_AF=0.8552;END=44059950;EUR_AF=0.8012;IMPRECISE;NS=2504;SAS_AF=0.6268;SITEPOST=0.9982;SVTYPE=INV	GT	0|1
1	44208924	ALU_umary_ALU_127	C	<INS:ME:ALU>	.	.	AC=511;AF=0.102037;AFR_AF=0.0628;AMR_AF=0.1081;AN=5008;CS=ALU_umary;EAS_AF=0.1091;EUR_AF=0.175;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0685;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAACAGAGCCCCC	GT	0|1
1	46366107	DEL_pindel_585	TGATGTTGGATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3152;AF=0.629393;AFR_AF=0.6437;AMR_AF=0.6138;AN=5008;CS=DEL_pindel;EAS_AF=0.7054;END=46366436;EUR_AF=0.5567;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6176;SITEPOST=0.9745;SVTYPE=DEL_ALU	GT	1|0
1	49549776	DEL_pindel_641	GAGTCTCTAGGAAGTTCCAAATTTCCCCACATCTTCCTGTCTTCCGAGCCCTCCA	G	.	PASS	AC=1677;AF=0.334864;AFR_AF=0.4334;AMR_AF=0.389;AN=5008;CS=DEL_pindel;EAS_AF=0.1359;END=49549830;EUR_AF=0.3817;NS=2504;SAS_AF=0.32;SITEPOST=0.9979;SVTYPE=DEL	GT	1|0
1	50912662	ALU_umary_ALU_153	C	<INS:ME:ALU>	.	.	AC=155;AF=0.0309505;AFR_AF=0.0492;AMR_AF=0.0144;AN=5008;CS=ALU_umary;EAS_AF=0.0238;EUR_AF=0.0408;MEINFO=AluYa5,8,281,-;NS=2504;SAS_AF=0.0153;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=CCCTAATAATTTTC	GT	0|1
1	56887702	DEL_pindel_702	TTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3500;AF=0.698882;AFR_AF=0.6543;AMR_AF=0.6441;AN=5008;CS=DEL_pindel;EAS_AF=0.7738;END=56888019;EUR_AF=0.6829;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7372;SITEPOST=0.9893;SVTYPE=DEL_ALU	GT	0|1
1	58071869	ALU_umary_ALU_182	T	<INS:ME:ALU>	.	.	AC=980;AF=0.195687;AFR_AF=0.0469;AMR_AF=0.2781;AN=5008;CS=ALU_umary;EAS_AF=0.1935;EUR_AF=0.2982;MEINFO=AluYa1_1,87,275,-;NS=2504;SAS_AF=0.2352;SITEPOST=1;SVLEN=188;SVTYPE=ALU;TSD=TTTTCCGGTATTTTT	GT	0|1
1	58343211	DEL_pindel_718	TGATTTATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCGCGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGTCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2533;AF=0.505791;AFR_AF=0.5613;AMR_AF=0.5908;AN=5008;CS=DEL_pindel;EAS_AF=0.4911;END=58343535;EUR_AF=0.496;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3957;SITEPOST=0.9958;SVTYPE=DEL_ALU	GT	1|0
1	58743910	BI_GS_DEL1_B1_P0059_752	A	<CN0>	100	PASS	AC=4618;AF=0.922125;AFR_AF=0.885;AMR_AF=0.9366;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9395;END=58744826;EUR_AF=0.9115;MC=SI_BD_432,YL_CN_STU_100,EM_DL_DEL1024894,DEL_pindel_727;NS=2504;SAS_AF=0.955;SVTYPE=DEL	GT	1|1
1	60046725	BI_GS_DEL1_B5_P0061_66	A	<CN0>	100	PASS	AC=316;AF=0.063099;AFR_AF=0.1573;AMR_AF=0.0202;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0248;END=60050638;EUR_AF=0.0219;MC=YL_CN_BEB_84,UW_VH_3196,SI_BD_440,UW_VH_21106,UW_VH_16990,UW_VH_13309;NS=2504;SAS_AF=0.0481;SVTYPE=DEL	GT	1|0
1	60048628	UW_VH_10127	C	<CN0>	100	PASS	AC=1141;AF=0.227835;AFR_AF=0.2958;AMR_AF=0.1282;AN=5008;CIEND=0,384;CIPOS=-445,0;CS=DEL_union;EAS_AF=0.1667;END=60049655;EUR_AF=0.1292;MC=UW_VH_2563,BI_GS_DEL1_B2_P0061_40,SI_BD_441;NS=2504;SAS_AF=0.3712;SVTYPE=DEL	GT	1|0
1	62113386	UW_VH_11751	C	<CN0>	100	PASS	AC=556;AF=0.111022;AFR_AF=0.0159;AMR_AF=0.2291;AN=5008;CIEND=0,385;CIPOS=-343,0;CS=DEL_union;EAS_AF=0.1766;END=62119528;EUR_AF=0.1421;MC=UW_VH_19502,UW_VH_8231,EM_DL_DEL02790,YL_CN_MXL_93,SI_BD_450,BI_GS_DEL1_B3_P0063_6,UW_VH_73,UW_VH_5191;NS=2504;SAS_AF=0.0562;SVTYPE=DEL	GT	0|1
1	62390586	DEL_pindel_764	CAAAAAGACAGACAGGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAGTTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=3767;AF=0.752196;AFR_AF=0.7458;AMR_AF=0.745;AN=5008;CS=DEL_pindel;EAS_AF=0.7976;END=62390935;EUR_AF=0.7078;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.7648;SITEPOST=0.9665;SVTYPE=DEL_ALU	GT	1|1
1	62654739	BI_GS_DEL1_B4_P0063_101	C	<CN0>	100	PASS	AC=525;AF=0.104832;AFR_AF=0.0038;AMR_AF=0.1282;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3641;END=62657162;EUR_AF=0.0318;MC=YL_CN_CDX_97,YL_CN_CHS_129,EM_DL_DEL02810,UW_VH_2564;NS=2504;SAS_AF=0.0327;SVTYPE=DEL	GT	0|1
1	63151819	DEL_pindel_767	AAGTAATAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=3503;AF=0.699481;AFR_AF=0.6611;AMR_AF=0.7277;AN=5008;CS=DEL_pindel;EAS_AF=0.7044;END=63152158;EUR_AF=0.7197;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7055;SITEPOST=0.95775;SVTYPE=DEL_ALU	GT	1|1
1	64958078	ALU_umary_ALU_211	T	<INS:ME:ALU>	.	.	AC=1745;AF=0.348442;AFR_AF=0.1293;AMR_AF=0.3991;AN=5008;CS=ALU_umary;EAS_AF=0.4435;EUR_AF=0.4612;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.3947;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CCCCCTATTGTTTTCTT	GT	0|1
1	65909622	DEL_pindel_814	AAAGACCTGATACTTTTTTTTTTTTTTTTTTTTTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTT	A	.	PASS	AC=1991;AF=0.397564;AFR_AF=0.3979;AMR_AF=0.5043;AN=5008;CS=DEL_pindel;EAS_AF=0.1349;END=65909892;EUR_AF=0.4841;MEINFO=LINE1,5783,6019,-;NS=2504;SAS_AF=0.5031;SITEPOST=0.9965;SVTYPE=DEL_LINE1	GT	0|1
1	68007970	BI_GS_DEL1_B3_P0069_2	T	<CN0>	100	PASS	AC=3492;AF=0.697284;AFR_AF=0.5091;AMR_AF=0.7003;AN=5008;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.8294;END=68008811;EUR_AF=0.7227;MC=EM_DL_DEL1028778,UW_VH_78,SI_BD_477;NS=2504;SAS_AF=0.7873;SVTYPE=DEL	GT	1|1
1	69806992	DEL_pindel_857	TAAAGGGGAGTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3593;AF=0.717452;AFR_AF=0.6831;AMR_AF=0.7291;AN=5008;CS=DEL_pindel;EAS_AF=0.7431;END=69807311;EUR_AF=0.7386;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7076;SITEPOST=0.9284;SVTYPE=DEL_ALU	GT	1|1
1	69943715	DEL_pindel_860	GCCCTCTGTCTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTCTTAGCCGGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=3050;AF=0.609026;AFR_AF=0.6142;AMR_AF=0.6095;AN=5008;CS=DEL_pindel;EAS_AF=0.6776;END=69944021;EUR_AF=0.6014;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.5389;SITEPOST=0.9866;SVTYPE=DEL_ALU	GT	1|0
1	70027325	DEL_pindel_863	ATAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATAATAATAATAAT	A	.	PASS	AC=2302;AF=0.459665;AFR_AF=0.3767;AMR_AF=0.4712;AN=5008;CS=DEL_pindel;EAS_AF=0.4365;END=70027682;EUR_AF=0.5089;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5368;SITEPOST=0.9834;SVTYPE=DEL_ALU	GT	1|0
1	70061670	ALU_umary_ALU_224	G	<INS:ME:ALU>	.	.	AC=801;AF=0.159944;AFR_AF=0.0673;AMR_AF=0.1427;AN=5008;CS=ALU_umary;EAS_AF=0.255;EUR_AF=0.2217;MEINFO=AluYb8,1,274,+;NS=2504;SAS_AF=0.136;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=ATAAAGTAGCTTGTG	GT	0|1
1	70946189	DEL_pindel_872	TATGGTTATGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=4018;AF=0.802316;AFR_AF=0.7753;AMR_AF=0.8516;AN=5008;CS=DEL_pindel;EAS_AF=0.7946;END=70946520;EUR_AF=0.8141;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.7996;SITEPOST=0.97;SVTYPE=DEL_ALU	GT	0|1
1	71148798	DEL_pindel_875	CTGAAAAAAATGACATTGGTAATTTCATAGGAATTGTACTGAATCCGTAGATTACTTTGGGCATTATGGTCCTTTTAACAATATTGATTCTTTCAATCCATGAGCATGGAATGTTTTTCCATTTGTTTGTGTCATTTACAATTTCTTTCATCAGTGTTTTGTAGTTCTCCTTGTAAAGATCTTTCTTCTTGGTTAAATATATTTCTAGCTAGTTTATTTTTTGTAGCTATTGTAAATGGGATTGAGTTCT	C	.	PASS	AC=1355;AF=0.270567;AFR_AF=0.3533;AMR_AF=0.2738;AN=5008;CS=DEL_pindel;EAS_AF=0.2927;END=71149047;EUR_AF=0.1173;NS=2504;SAS_AF=0.2914;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
1	71741319	DEL_pindel_885	AGTTCCTTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAG	A	.	PASS	AC=4214;AF=0.841454;AFR_AF=0.8268;AMR_AF=0.8775;AN=5008;CS=DEL_pindel;EAS_AF=0.8472;END=71741629;EUR_AF=0.8459;MEINFO=AluYb8,37,281,-;NS=2504;SAS_AF=0.8252;SITEPOST=0.967;SVTYPE=DEL_ALU	GT	1|1
1	72755694	UW_VH_10235	T	<CN0>	100	PASS	AC=413;AF=0.082468;AFR_AF=0.087;AMR_AF=0.0807;AN=5008;CIEND=0,347;CIPOS=-463,0;CS=DEL_union;EAS_AF=0.0129;END=72764095;EUR_AF=0.174;MC=UW_VH_2862,BI_GS_DEL1_B4_P0073_145,UW_VH_1996,YL_CN_GWD_133;NS=2504;SAS_AF=0.0552;SVTYPE=DEL	GT	1|0
1	72766343	BI_GS_CNV_1_72766343_72811815	T	<CN0>	100	PASS	AC=3383;AF=0.675519;AFR_AF=0.531;AMR_AF=0.7032;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.9335;END=72811815;EUR_AF=0.6412;MC=YL_CN_BEB_91,UW_VH_1948,UW_VH_6511,SI_BD_500,UW_VH_3865,UW_VH_20412,UW_VH_10860,UW_VH_14488,UW_VH_5683;NS=2504;SAS_AF=0.6207;SVTYPE=DEL	GT	1|0
1	72778537	BI_GS_DEL1_B3_P0073_40	G	<CN0>	100	PASS	AC=3384;AF=0.675719;AFR_AF=0.531;AMR_AF=0.7032;AN=5008;CIEND=-64,64;CIPOS=-64,64;CS=DEL_union;EAS_AF=0.9335;END=72784594;EUR_AF=0.6412;MC=EM_DL_DEL03014;NS=2504;SAS_AF=0.6217;SVTYPE=DEL	GT	0|1
1	74312425	BI_GS_DEL1_B2_P0075_218	A	<CN0>	100	PASS	AC=1894;AF=0.378195;AFR_AF=0.2496;AMR_AF=0.3386;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5357;END=74312678;EUR_AF=0.3539;MC=DEL_pindel_917,UW_VH_84;NS=2504;SAS_AF=0.4427;SVTYPE=DEL	GT	1|0
1	74471655	ALU_umary_ALU_252	C	<INS:ME:ALU>	.	.	AC=328;AF=0.0654952;AFR_AF=0.1104;AMR_AF=0.0648;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0974;MEINFO=AluUndef,7,281,+;NS=2504;SAS_AF=0.0399;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAAAATTTAGTCTC	GT	0|1
1	75192907	L1_umary_LINE1_61	C	<INS:ME:LINE1>	.	.	AC=946;AF=0.188898;AFR_AF=0.0688;AMR_AF=0.3314;AN=5008;CS=L1_umary;EAS_AF=0.0069;EUR_AF=0.4672;MEINFO=LINE1,2358,6015,-;NS=2504;SAS_AF=0.1513;SITEPOST=1;SVLEN=3657;SVTYPE=LINE1;TSD=CCGTATTAGTTCATTTTC	GT	1|0
1	78649157	UW_VH_86	A	<CN0>	100	PASS	AC=474;AF=0.0946486;AFR_AF=0.1384;AMR_AF=0.1571;AN=5008;CIEND=0,362;CIPOS=-300,0;CS=DEL_union;EAS_AF=0.004;END=78654148;EUR_AF=0.0716;MC=EM_DL_DEL03111,YL_CN_FIN_125,BI_GS_DEL1_B1_P0079_488,SI_BD_525;NS=2504;SAS_AF=0.1084;SVTYPE=DEL	GT	0|1
1	79331208	ALU_umary_ALU_279	C	<INS:ME:ALU>	.	.	AC=552;AF=0.110224;AFR_AF=0.0295;AMR_AF=0.1888;AN=5008;CS=ALU_umary;EAS_AF=0.0893;EUR_AF=0.1362;MEINFO=AluYa5,3,281,-;NS=2504;SAS_AF=0.1585;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TGAGCATATTTTC	GT	1|0
1	79582082	ALU_umary_ALU_286	T	<INS:ME:ALU>	.	.	AC=3092;AF=0.617412;AFR_AF=0.6346;AMR_AF=0.621;AN=5008;CS=ALU_umary;EAS_AF=0.6548;EUR_AF=0.5875;MEINFO=AluYb11,4,277,-;NS=2504;SAS_AF=0.5838;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=GATTTTT	GT	1|0
1	80299106	ALU_umary_ALU_288	T	<INS:ME:ALU>	.	.	AC=988;AF=0.197284;AFR_AF=0.053;AMR_AF=0.3357;AN=5008;CS=ALU_umary;EAS_AF=0.0327;EUR_AF=0.3757;MEINFO=AluYb11,33,281,-;NS=2504;SAS_AF=0.2802;SITEPOST=1;SVLEN=248;SVTYPE=ALU;TSD=GCATTGTTTT	GT	0|1
1	81194341	DEL_pindel_967	GAAAACTGGCTGGTGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	.	PASS	AC=2616;AF=0.522364;AFR_AF=0.5983;AMR_AF=0.3963;AN=5008;CS=DEL_pindel;EAS_AF=0.5903;END=81194668;EUR_AF=0.4225;MEINFO=AluYa3_1,1,281,+;NS=2504;SAS_AF=0.5419;SITEPOST=0.9982;SVTYPE=DEL_ALU	GT	0|1
1	83042644	DEL_pindel_992	TTTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3180;AF=0.634984;AFR_AF=0.7511;AMR_AF=0.6455;AN=5008;CS=DEL_pindel;EAS_AF=0.5446;END=83042964;EUR_AF=0.5765;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6237;SITEPOST=0.9744;SVTYPE=DEL_ALU	GT	1|0
1	84517858	YL_CN_MXL_110	A	<CN0>	100	PASS	AC=3754;AF=0.749601;AFR_AF=0.7451;AMR_AF=0.7161;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.871;END=84524770;EUR_AF=0.7207;MC=YL_CN_ASW_150,YL_CN_ACB_138,YL_CN_IBS_104;MEINFO=LINE1,2,6019,-;NS=2504;SAS_AF=0.684;SVTYPE=DEL_LINE1	GT	1|1
1	85620127	ALU_umary_ALU_319	T	<INS:ME:ALU>	.	.	AC=2420;AF=0.483227;AFR_AF=0.4652;AMR_AF=0.4611;AN=5008;CS=ALU_umary;EAS_AF=0.506;EUR_AF=0.504;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.4785;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TCT	GT	0|1
1	85980461	DUP_gs_CNV_1_85980461_86006144	T	<CN2>,<CN3>	.	PASS	AC=4947,42;AF=0.987819,0.00838658;AFR_AF=0.9675,0.0272;AMR_AF=0.9957,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.994,0;END=86006144;EUR_AF=0.994,0.003;NS=2504;SAS_AF=0.9969,0.001;SITEPOST=1;SVTYPE=CNV	GT	1|1
1	86405790	DEL_pindel_1016	TAAAAAGTGCCATAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2925;AF=0.584065;AFR_AF=0.4909;AMR_AF=0.6282;AN=5008;CS=DEL_pindel;EAS_AF=0.6637;END=86406118;EUR_AF=0.6014;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5787;SITEPOST=0.9948;SVTYPE=DEL_ALU	GT	0|1
1	86740980	DEL_pindel_1025	TAAATCTACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4244;AF=0.847444;AFR_AF=0.9327;AMR_AF=0.6643;AN=5008;CS=DEL_pindel;EAS_AF=0.9583;END=86741697;EUR_AF=0.7316;MEINFO=LINE1,5537,5600,+;NS=2504;SAS_AF=0.8671;SITEPOST=0.9994;SVTYPE=DEL_LINE1	GT	0|1
1	89475930	UW_VH_1	G	<CN0>	100	PASS	AC=1000;AF=0.199681;AFR_AF=0.0461;AMR_AF=0.2421;AN=5008;CIEND=0,438;CIPOS=-482,0;CS=DEL_union;EAS_AF=0.2034;END=89478613;EUR_AF=0.3201;MC=SI_BD_588,YL_CN_KHV_169,EM_DL_DEL03344,BI_GS_DEL1_B1_P0090_402;NS=2504;SAS_AF=0.2495;SVTYPE=DEL	GT	1|1
1	91624771	DEL_pindel_1065	TAAAAGTGGAGAATCTTCTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACGAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3741;AF=0.747005;AFR_AF=0.7398;AMR_AF=0.755;AN=5008;CS=DEL_pindel;EAS_AF=0.7282;END=91625054;EUR_AF=0.7714;MEINFO=AluY,37,281,+;NS=2504;SAS_AF=0.7454;SITEPOST=0.9476;SVTYPE=DEL_ALU	GT	1|1
1	92232051	UW_VH_25108	T	<CN0>	100	PASS	AC=1397;AF=0.278954;AFR_AF=0.3253;AMR_AF=0.2882;AN=5008;CIEND=0,326;CIPOS=-324,0;CS=DEL_union;EAS_AF=0.0556;END=92233331;EUR_AF=0.3091;MC=YL_CN_TSI_109,BI_GS_DEL1_B2_P0093_196,SI_BD_601,YL_CN_IBS_109,UW_VH_3176,UW_VH_2446,EM_DL_DEL1039023,YL_CN_ESN_120,UW_VH_19170,YL_CN_ITU_131,YL_CN_CLM_101,UW_VH_9803;NS=2504;SAS_AF=0.409;SVTYPE=DEL	GT	1|0
1	93167530	ALU_umary_ALU_356	T	<INS:ME:ALU>	.	.	AC=2240;AF=0.447284;AFR_AF=0.4539;AMR_AF=0.4135;AN=5008;CS=ALU_umary;EAS_AF=0.4712;EUR_AF=0.4433;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4417;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TATGTTATTTT	GT	1|0
1	93498232	ALU_umary_ALU_357	T	<INS:ME:ALU>	.	.	AC=2871;AF=0.573283;AFR_AF=0.5734;AMR_AF=0.6268;AN=5008;CS=ALU_umary;EAS_AF=0.4732;EUR_AF=0.661;MEINFO=AluYa5,3,280,-;NS=2504;SAS_AF=0.5481;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AGATTCCTTTTTCTAATTCT	GT	1|1
1	100551660	ALU_umary_ALU_398	G	<INS:ME:ALU>	.	.	AC=151;AF=0.0301518;AFR_AF=0.0658;AMR_AF=0.0159;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0447;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0082;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAATTAATACAAATGAG	GT	0|1
1	100994221	ALU_umary_ALU_402	G	<INS:ME:ALU>	.	.	AC=3106;AF=0.620208;AFR_AF=0.3767;AMR_AF=0.7075;AN=5008;CS=ALU_umary;EAS_AF=0.7153;EUR_AF=0.6998;MEINFO=AluUndef,1,274,+;NS=2504;SAS_AF=0.7076;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=AAAATTTCATG	GT	1|1
1	105255038	BI_GS_DEL1_B1_P0106_186	G	<CN0>	100	PASS	AC=1340;AF=0.267572;AFR_AF=0.3071;AMR_AF=0.1744;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5159;END=105256195;EUR_AF=0.0785;MC=UW_VH_2978,YL_CN_STU_135,UW_VH_21745;NS=2504;SAS_AF=0.2188;SVTYPE=DEL	GT	1|0
1	105667567	BI_GS_DEL1_B5_P0106_645	G	<CN0>	100	PASS	AC=654;AF=0.130591;AFR_AF=0.174;AMR_AF=0.0677;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1538;END=105668446;EUR_AF=0.1034;MC=UW_VH_2190,SI_BD_665;NS=2504;SAS_AF=0.1207;SVTYPE=DEL	GT	1|0
1	106015797	UW_VH_11498	T	<CN0>	100	PASS	AC=2027;AF=0.404752;AFR_AF=0.4834;AMR_AF=0.3833;AN=5008;CIEND=0,426;CIPOS=-493,0;CS=DEL_union;EAS_AF=0.5099;END=106023398;EUR_AF=0.3111;MC=EM_DL_DEL03675,UW_VH_4841,UW_VH_20934,BI_GS_DEL1_B2_P0107_13,SI_BD_666,YL_CN_CHS_165;NS=2504;SAS_AF=0.3016;SVTYPE=DEL	GT	1|0
1	110187159	EM_DL_DEL04008	A	<CN0>	100	PASS	AC=3026;AF=0.604233;AFR_AF=0.5424;AMR_AF=0.7161;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.6716;END=110191392;EUR_AF=0.5895;MC=UW_VH_11157,UW_VH_105,UW_VH_14383,UW_VH_16373,UW_VH_15594,UW_VH_14446,UW_VH_17415,UW_VH_16704,UW_VH_18787,UW_VH_17281,UW_VH_10869,UW_VH_4796,UW_VH_20579,UW_VH_3222,SI_BD_694,UW_VH_21775,UW_VH_4341,UW_VH_14511,BI_GS_DEL1_B1_P0111_170,UW_VH_9883,YL_CN_CHS_170,UW_VH_15855,UW_VH_12772,UW_VH_13558,UW_VH_11475,UW_VH_5957,UW_VH_19437,UW_VH_11432,UW_VH_15395,UW_VH_21999,UW_VH_11170,UW_VH_15110;NS=2504;SAS_AF=0.5542;SVTYPE=DEL	GT	1|1
1	110225019	YL_CN_MSL_117	C	<CN0>	100	PASS	AC=3177;AF=0.634385;AFR_AF=0.4962;AMR_AF=0.6902;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.753;END=110245280;EUR_AF=0.7227;NS=2504;SAS_AF=0.5685;SVTYPE=DEL	GT	1|1
1	110230075	DUP_gs_CNV_1_110230075_110241247	G	<CN0>,<CN2>	.	PASS	AC=3196,23;AF=0.638179,0.00459265;AFR_AF=0.497,0.0068;AMR_AF=0.6945,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.7619,0.005;END=110241247;EUR_AF=0.7276,0.003;NS=2504;SAS_AF=0.5695,0.0031;SITEPOST=1;SVTYPE=CNV	GT	1|1
1	112074694	DEL_pindel_1254	AGGAAAGATTATAGCCCTGTACTCTGCTTCTTTGGCGTGGTTCCTTTCCTAGCTTAAGGTAGTTTTCTCACATGCATGTGCTGACCAGCACTCACTCAGCTGAAGGCTTCGG	A	.	PASS	AC=1289;AF=0.257388;AFR_AF=0.0968;AMR_AF=0.4438;AN=5008;CS=DEL_pindel;EAS_AF=0.252;END=112074805;EUR_AF=0.2704;NS=2504;SAS_AF=0.3344;SITEPOST=0.9992;SVTYPE=DEL	GT	1|0
1	112691740	UW_VH_11519	A	<CN0>	100	PASS	AC=1519;AF=0.303315;AFR_AF=0.025;AMR_AF=0.402;AN=5008;CIEND=0,466;CIPOS=-465,0;CS=DEL_union;EAS_AF=0.377;END=112704718;EUR_AF=0.3181;MC=UW_VH_5904,UW_VH_5684,EM_DL_DEL04047,BI_GS_DEL1_B5_P0113_972,UW_VH_9919,UW_VH_20563,UW_VH_18225,YL_CN_CHS_174,UW_VH_11717,UW_VH_1950;NS=2504;SAS_AF=0.5184;SVTYPE=DEL	GT	1|1
1	112834896	YL_CN_ACB_172	C	<CN0>	100	PASS	AC=4374;AF=0.873403;AFR_AF=0.7625;AMR_AF=0.853;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9256;END=112837824;EUR_AF=0.9344;MC=YL_CN_CDX_136,YL_CN_LWK_130;NS=2504;SAS_AF=0.9213;SVTYPE=DEL	GT	1|1
1	112992009	ALU_umary_ALU_454	T	<INS:ME:ALU>	.	.	AC=1924;AF=0.384185;AFR_AF=0.2458;AMR_AF=0.4078;AN=5008;CS=ALU_umary;EAS_AF=0.3274;EUR_AF=0.4801;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.5143;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CCAGACACGTTATTT	GT	1|0
1	113799625	BI_GS_DEL1_B2_P0114_484	G	<CN0>	100	PASS	AC=3804;AF=0.759585;AFR_AF=0.4818;AMR_AF=0.8141;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9653;END=113800089;EUR_AF=0.837;MC=UW_VH_107,DEL_pindel_1283;NS=2504;SAS_AF=0.8047;SVTYPE=DEL	GT	1|0
1	118091036	DEL_pindel_1333	TAAGACACCCAGAAGCCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3501;AF=0.699081;AFR_AF=0.6513;AMR_AF=0.7896;AN=5008;CS=DEL_pindel;EAS_AF=0.7401;END=118091258;EUR_AF=0.6988;MEINFO=AluY,79,281,+;NS=2504;SAS_AF=0.6575;SITEPOST=0.9846;SVTYPE=DEL_ALU	GT	1|1
1	119080704	ALU_umary_ALU_481	T	<INS:ME:ALU>	.	.	AC=985;AF=0.196685;AFR_AF=0.0703;AMR_AF=0.1974;AN=5008;CS=ALU_umary;EAS_AF=0.125;EUR_AF=0.3588;MEINFO=AluYa5,1,279,-;NS=2504;SAS_AF=0.274;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GCAACCAGCTTTT	GT	1|0
1	143984622	DUP_gs_CNV_1_143984622_144094733	A	<CN2>,<CN3>	.	PASS	AC=4791,41;AF=0.956669,0.0081869;AFR_AF=0.8873,0.0106;AMR_AF=0.9597,0.013;AN=5008;CS=DUP_gs;EAS_AF=0.9762,0.0119;END=144094733;EUR_AF=0.992,0.004;NS=2504;SAS_AF=0.9918,0.002;SITEPOST=1;SVTYPE=CNV	GT	1|1
1	144468090	BI_GS_CNV_1_144468090_144480623	T	<CN0>	100	PASS	AC=1930;AF=0.385383;AFR_AF=0.1944;AMR_AF=0.4712;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.3839;END=144480623;EUR_AF=0.3956;NS=2504;SAS_AF=0.5736;SVTYPE=DEL	GT	0|1
1	144691202	DUP_gs_CNV_1_144691202_144710622	G	<CN2>,<CN3>	.	PASS	AC=3434,2;AF=0.685703,0.00039936;AFR_AF=0.4387,0;AMR_AF=0.7147,0;AN=5008;CS=DUP_gs;EAS_AF=0.8859,0;END=144710622;EUR_AF=0.7396,0;NS=2504;SAS_AF=0.7372,0.002;SITEPOST=0.9969;SVTYPE=CNV	GT	0|1
1	144839080	DUP_gs_CNV_1_144839080_144849492	C	<CN2>,<CN3>	.	PASS	AC=4981,1;AF=0.994609,0.00019968;AFR_AF=0.9909,0.0008;AMR_AF=0.9971,0;AN=5008;CS=DUP_gs;EAS_AF=0.9881,0;END=144849492;EUR_AF=0.999,0;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
1	144862244	DUP_gs_CNV_1_144862244_144892802	A	<CN2>,<CN3>	.	PASS	AC=5007,1;AF=0.9998,0.00019968;AFR_AF=0.9992,0.0008;AMR_AF=1,0;AN=5008;CS=DUP_gs;EAS_AF=1,0;END=144892802;EUR_AF=1,0;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
1	144913699	DUP_gs_CNV_1_144913699_144951391	C	<CN2>,<CN3>	.	PASS	AC=4995,13;AF=0.997404,0.00259585;AFR_AF=0.9992,0.0008;AMR_AF=0.9971,0.0029;AN=5008;CS=DUP_gs;EAS_AF=1,0;END=144951391;EUR_AF=0.992,0.008;NS=2504;SAS_AF=0.998,0.002;SITEPOST=1;SVTYPE=CNV	GT	1|1
1	144973077	DUP_gs_CNV_1_144973077_144989257	T	<CN2>	.	PASS	AC=4992;AF=0.996805;AFR_AF=0.9955;AMR_AF=0.9957;AN=5008;CS=DUP_gs;EAS_AF=0.996;END=144989257;EUR_AF=1;NS=2504;SAS_AF=0.9969;SITEPOST=1;SVTYPE=DUP	GT	1|1
1	145120320	DUP_gs_CNV_1_145120320_145182150	T	<CN2>,<CN3>	.	PASS	AC=4990,8;AF=0.996406,0.00159744;AFR_AF=0.9977,0;AMR_AF=0.9942,0;AN=5008;CS=DUP_gs;EAS_AF=0.9911,0.0069;END=145182150;EUR_AF=0.999,0.001;NS=2504;SAS_AF=0.999,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
1	146081807	DUP_uwash_chr1_146081807_146164363	G	<CN2>,<CN3>	.	PASS	AC=5005,1;AF=0.999401,0.00019968;AFR_AF=0.9985,0.0008;AMR_AF=1,0;AN=5008;CS=DUP_uwash;EAS_AF=0.999,0;END=146164363;EUR_AF=1,0;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
1	148832244	DUP_gs_CNV_1_148832244_148954132	T	<CN2>,<CN3>,<CN4>	.	PASS	AC=402,4530,27;AF=0.0802716,0.904553,0.00539137;AFR_AF=0.0431,0.9463,0.0061;AMR_AF=0.0908,0.889,0.0101;AN=5008;CS=DUP_gs;EAS_AF=0.1081,0.874,0.005;END=148954132;EUR_AF=0.0865,0.9026,0;NS=2504;SAS_AF=0.0879,0.8926,0.0072;SITEPOST=0.9999;SVTYPE=CNV	GT	2|2
1	149015523	DUP_gs_CNV_1_149015523_149036627	A	<CN0>,<CN2>,<CN3>	.	PASS	AC=5,4413,51;AF=0.0009984,0.88119,0.0101837;AFR_AF=0.0008,0.9319,0.0113;AMR_AF=0,0.8818,0.013;AN=5008;CS=DUP_gs;EAS_AF=0,0.8413,0.0119;END=149036627;EUR_AF=0,0.8877,0.003;NS=2504;SAS_AF=0.0041,0.8466,0.0123;SITEPOST=0.9985;SVTYPE=CNV	GT	2|2
1	149218121	ALU_umary_ALU_506	T	<INS:ME:ALU>	.	.	AC=524;AF=0.104633;AFR_AF=0.115;AMR_AF=0.0778;AN=5008;CS=ALU_umary;EAS_AF=0.0823;EUR_AF=0.1233;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0.1135;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=null	GT	0|1
1	149231192	DUP_gs_CNV_1_149231192_149241216	C	<CN2>,<CN3>	.	PASS	AC=4383,41;AF=0.8752,0.0081869;AFR_AF=0.9289,0.0076;AMR_AF=0.8617,0.0144;AN=5008;CS=DUP_gs;EAS_AF=0.8552,0.0099;END=149241216;EUR_AF=0.8728,0.004;NS=2504;SAS_AF=0.8354,0.0072;SITEPOST=0.9983;SVTYPE=CNV	GT	1|1
1	149249429	DUP_gs_CNV_1_149249429_149284877	C	<CN0>,<CN2>,<CN3>	.	PASS	AC=11,4449,54;AF=0.00219649,0.888379,0.0107828;AFR_AF=0,0.9395,0.0106;AMR_AF=0,0.8718,0.0187;AN=5008;CS=DUP_gs;EAS_AF=0,0.8611,0.0119;END=149284877;EUR_AF=0.004,0.8966,0.007;NS=2504;SAS_AF=0.0072,0.8507,0.0082;SITEPOST=0.9998;SVTYPE=CNV	GT	2|2
1	149289438	DUP_gs_CNV_1_149289438_149358445	C	<CN2>,<CN3>	.	PASS	AC=4425,64;AF=0.883586,0.0127795;AFR_AF=0.9349,0.0151;AMR_AF=0.8703,0.0187;AN=5008;CS=DUP_gs;EAS_AF=0.8581,0.0129;END=149358445;EUR_AF=0.8897,0.0089;NS=2504;SAS_AF=0.8436,0.0092;SITEPOST=0.9999;SVTYPE=CNV	GT	1|1
1	149532289	BI_GS_CNV_1_149532289_149572952	T	<CN0>	100	PASS	AC=4559;AF=0.910343;AFR_AF=0.8949;AMR_AF=0.9063;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.8125;END=149572952;EUR_AF=0.992;NS=2504;SAS_AF=0.9509;SVTYPE=DEL	GT	1|1
1	150037842	DEL_pindel_1394	TCAAAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCG	T	.	PASS	AC=3842;AF=0.767173;AFR_AF=0.528;AMR_AF=0.8343;AN=5008;CS=DEL_pindel;EAS_AF=0.8542;END=150037898;EUR_AF=0.8569;MEINFO=AluYc,259,282,-;NS=2504;SAS_AF=0.8609;SITEPOST=0.9859;SVTYPE=DEL_ALU	GT	1|1
1	152760084	UW_VH_24538	C	<CN0>	100	PASS	AC=982;AF=0.196086;AFR_AF=0.2035;AMR_AF=0.2291;AN=5008;CIEND=0,119;CIPOS=-369,0;CS=DEL_union;EAS_AF=0.0347;END=152770547;EUR_AF=0.3569;MC=YL_CN_ITU_231,BI_GS_CNV_1_152760314_152770867,EM_DL_DEL05999;NS=2504;SAS_AF=0.1636;SVTYPE=DEL	GT	1|0
1	153133703	BI_GS_DEL1_B5_P0154_145	A	<CN0>	100	PASS	AC=2213;AF=0.441893;AFR_AF=0.2655;AMR_AF=0.4337;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5149;END=153133960;EUR_AF=0.5507;MC=UW_VH_115;NS=2504;SAS_AF=0.499;SVTYPE=DEL	GT	1|0
1	153252216	L1_umary_LINE1_137	C	<INS:ME:LINE1>	.	.	AC=50;AF=0.00998403;AFR_AF=0.0098;AMR_AF=0.0072;AN=5008;CS=L1_umary;EAS_AF=0.005;EUR_AF=0.003;MEINFO=LINE1,4827,5620,+;NS=2504;SAS_AF=0.0245;SITEPOST=1;SVLEN=793;SVTYPE=LINE1;TSD=TGTCA	GT	0|1
1	157540655	BI_GS_DEL1_B4_P0158_141	G	<CN0>	100	PASS	AC=1984;AF=0.396166;AFR_AF=0.0862;AMR_AF=0.5245;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6101;END=157540871;EUR_AF=0.3956;MC=UW_VH_2001;NS=2504;SAS_AF=0.5041;SVTYPE=DEL	GT	1|0
1	157887236	INV_delly_INV00007359	T	<INV>	.	PASS	AC=1276;AF=0.254792;AFR_AF=0.2073;AMR_AF=0.2017;AN=5008;CIEND=-17,17;CIPOS=-17,17;CS=INV_delly;EAS_AF=0.2669;END=157887845;EUR_AF=0.3111;IMPRECISE;NS=2504;SAS_AF=0.2863;SITEPOST=1;SVTYPE=INV	GT	1|0
1	158489615	BI_GS_DEL1_B1_P0159_428	G	<CN0>	100	PASS	AC=14;AF=0.00279553;AFR_AF=0;AMR_AF=0.0043;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=158491973;EUR_AF=0.0099;MC=UW_VH_116;NS=2504;SAS_AF=0.001;SVTYPE=DEL	GT	1|0
1	158867540	BI_GS_DEL1_B1_P0159_764	A	<CN0>	100	PASS	AC=3912;AF=0.78115;AFR_AF=0.6997;AMR_AF=0.8429;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9623;END=158869980;EUR_AF=0.7366;MC=SI_BD_841,YL_CN_FIN_239,YL_CN_JPT_249,EM_DL_DEL06158,YL_CN_GWD_297,UW_VH_2002;NS=2504;SAS_AF=0.7065;SVTYPE=DEL	GT	0|1
1	158961353	BI_GS_DEL1_B1_P0159_834	C	<CN0>	100	PASS	AC=485;AF=0.0968451;AFR_AF=0.1589;AMR_AF=0.1095;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0;END=158966208;EUR_AF=0.1332;MC=EM_DL_DEL06162,UW_VH_15295,UW_VH_2003,SI_BD_842,YL_CN_ITU_240;NS=2504;SAS_AF=0.0665;SVTYPE=DEL	GT	1|0
1	159648708	BI_GS_DEL1_B2_P0160_484	T	<CN0>	100	PASS	AC=3464;AF=0.691693;AFR_AF=0.5628;AMR_AF=0.8372;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8244;END=159649659;EUR_AF=0.7336;MC=UW_VH_118,SI_BD_845,EM_DL_DEL1055034;NS=2504;SAS_AF=0.5828;SVTYPE=DEL	GT	1|1
1	162052665	DEL_pindel_1498	TGTGTCCTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCCCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3734;AF=0.745607;AFR_AF=0.6952;AMR_AF=0.7853;AN=5008;CS=DEL_pindel;EAS_AF=0.744;END=162052985;EUR_AF=0.7813;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7505;SITEPOST=0.9614;SVTYPE=DEL_ALU	GT	1|0
1	162761322	ALU_umary_ALU_549	T	<INS:ME:ALU>	.	.	AC=3354;AF=0.669728;AFR_AF=0.4894;AMR_AF=0.6844;AN=5008;CS=ALU_umary;EAS_AF=0.753;EUR_AF=0.7485;MEINFO=AluYa5b1,3,281,-;NS=2504;SAS_AF=0.7362;SITEPOST=0.9968;SVLEN=278;SVTYPE=ALU;TSD=CATTTGGCATTTTT	GT	1|1
1	163314443	ALU_umary_ALU_556	G	<INS:ME:ALU>	.	.	AC=1661;AF=0.331669;AFR_AF=0.2466;AMR_AF=0.3141;AN=5008;CS=ALU_umary;EAS_AF=0.2857;EUR_AF=0.3539;MEINFO=AluYa4_4,1,281,+;NS=2504;SAS_AF=0.4836;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAGTGGGTAG	GT	1|1
1	165659306	ALU_umary_ALU_568	A	<INS:ME:ALU>	.	.	AC=2154;AF=0.430112;AFR_AF=0.3941;AMR_AF=0.4107;AN=5008;CS=ALU_umary;EAS_AF=0.5218;EUR_AF=0.3698;MEINFO=AluUndef,18,281,+;NS=2504;SAS_AF=0.4601;SITEPOST=1;SVLEN=263;SVTYPE=ALU;TSD=AA	GT	1|1
1	165731209	DEL_pindel_1530	AAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGAT	A	.	PASS	AC=2776;AF=0.554313;AFR_AF=0.5567;AMR_AF=0.5418;AN=5008;CS=DEL_pindel;EAS_AF=0.5764;END=165731489;EUR_AF=0.5318;NS=2504;SAS_AF=0.5603;SITEPOST=0.9876;SVTYPE=DEL	GT	0|1
1	169225213	BI_GS_CNV_1_169225213_169245324	T	<CN0>	100	PASS	AC=1016;AF=0.202875;AFR_AF=0.1067;AMR_AF=0.2104;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.1369;END=169245324;EUR_AF=0.3837;MC=YL_CN_GBR_260;NS=2504;SAS_AF=0.2096;SVTYPE=DEL	GT	1|0
1	170964063	ALU_umary_ALU_589	C	<INS:ME:ALU>	.	.	AC=220;AF=0.0439297;AFR_AF=0.0166;AMR_AF=0.0764;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.1024;MEINFO=AluYb8,1,277,-;NS=2504;SAS_AF=0.0429;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAGATTATAGCCCAGACC	GT	0|1
1	171358314	ALU_umary_ALU_592	T	<INS:ME:ALU>	.	.	AC=396;AF=0.0790735;AFR_AF=0.0197;AMR_AF=0.0677;AN=5008;CS=ALU_umary;EAS_AF=0.0069;EUR_AF=0.1024;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0.2178;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=CAAAAGTTTTACTCTTT	GT	1|0
1	171783587	DEL_pindel_1552	ACTCCAGCCTGGGCGACAGAGTGGGACTCCATCTAAAAAAAAAAAAAAAAAAAGGGGCTGATG	A	.	PASS	AC=2052;AF=0.409744;AFR_AF=0.3048;AMR_AF=0.3977;AN=5008;CS=DEL_pindel;EAS_AF=0.6647;END=171783649;EUR_AF=0.4245;NS=2504;SAS_AF=0.2822;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
1	174333015	ALU_umary_ALU_602	T	<INS:ME:ALU>	.	.	AC=531;AF=0.10603;AFR_AF=0.0635;AMR_AF=0.1729;AN=5008;CS=ALU_umary;EAS_AF=0.0397;EUR_AF=0.1571;MEINFO=AluYb7_3,1,263,-;NS=2504;SAS_AF=0.1319;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=TGTCAAACCATTCTT	GT	1|0
1	175071066	DUP_gs_CNV_1_175071066_175077094	T	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>,<CN6>	.	PASS	AC=903,12,29,2,1,13;AF=0.180312,0.00239617,0.00579073,0.00039936,0.00019968,0.00259585;AFR_AF=0.0696,0.0053,0.0182,0.0008,0.0008,0.0076;AMR_AF=0.1686,0.0014,0.0072,0.0014,0,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.3472,0,0,0,0,0;END=175077094;EUR_AF=0.1292,0,0,0,0,0;NS=2504;SAS_AF=0.2188,0.0041,0,0,0,0;SITEPOST=1;SVTYPE=CNV	GT	1|0
1	178495321	BI_GS_DEL1_B5_P0179_545	A	<CN0>	100	PASS	AC=1760;AF=0.351438;AFR_AF=0.3086;AMR_AF=0.2983;AN=5008;CIEND=-24,24;CIPOS=-24,24;CS=DEL_union;EAS_AF=0.4177;END=178495683;EUR_AF=0.3579;NS=2504;SAS_AF=0.3722;SVTYPE=DEL	GT	1|0
1	178948185	ALU_umary_ALU_622	T	<INS:ME:ALU>	.	.	AC=1094;AF=0.21845;AFR_AF=0.0522;AMR_AF=0.2435;AN=5008;CS=ALU_umary;EAS_AF=0.2798;EUR_AF=0.3012;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.2771;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAGAAAATCGCTT	GT	0|1
1	179491966	ALU_umary_ALU_623	T	<INS:ME:ALU>	.	.	AC=1036;AF=0.206869;AFR_AF=0.084;AMR_AF=0.2161;AN=5008;CS=ALU_umary;EAS_AF=0.253;EUR_AF=0.2634;MEINFO=AluYb11,12,281,-;NS=2504;SAS_AF=0.2607;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=ATATCCTAATT	GT	0|1
1	180183831	DEL_pindel_1660	ATATTGTGTAATCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCGCGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=4032;AF=0.805112;AFR_AF=0.7194;AMR_AF=0.8487;AN=5008;CS=DEL_pindel;EAS_AF=0.8542;END=180184150;EUR_AF=0.837;MEINFO=AluYh7,1,281,-;NS=2504;SAS_AF=0.8067;SITEPOST=0.9788;SVTYPE=DEL_ALU	GT	1|1
1	180292989	DEL_pindel_1667	TTACTCTATGTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3502;AF=0.699281;AFR_AF=0.7065;AMR_AF=0.7118;AN=5008;CS=DEL_pindel;EAS_AF=0.7034;END=180293313;EUR_AF=0.6849;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6912;SITEPOST=0.95845;SVTYPE=DEL_ALU	GT	1|0
1	180857564	ALU_umary_ALU_629	C	<INS:ME:ALU>	.	.	AC=1216;AF=0.242812;AFR_AF=0.2118;AMR_AF=0.268;AN=5008;CS=ALU_umary;EAS_AF=0.1419;EUR_AF=0.3231;MEINFO=AluUndef,3,281,+;NS=2504;SAS_AF=0.2883;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TAAAATTGAGATAGC	GT	1|1
1	187464747	YL_CN_PUR_321	T	<CN0>	100	PASS	AC=4280;AF=0.854633;AFR_AF=0.7693;AMR_AF=0.866;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9772;END=187466829;EUR_AF=0.7575;MC=EM_DL_DEL1065840,YL_CN_JPT_273,YL_CN_MSL_211,YL_CN_CEU_323;NS=2504;SAS_AF=0.9356;SVTYPE=DEL	GT	1|0
1	187716053	BI_GS_DEL1_B5_P0188_771	G	<CN0>	100	PASS	AC=1019;AF=0.203474;AFR_AF=0.0514;AMR_AF=0.2882;AN=5008;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.0099;END=187722514;EUR_AF=0.4682;MC=SI_BD_972,UW_VH_19561,EM_DL_DEL06972,YL_CN_STU_257,UW_VH_130;NS=2504;SAS_AF=0.2761;SVTYPE=DEL	GT	1|1
1	188186464	ALU_umary_ALU_660	T	<INS:ME:ALU>	.	.	AC=474;AF=0.0946486;AFR_AF=0.0794;AMR_AF=0.1009;AN=5008;CS=ALU_umary;EAS_AF=0.0397;EUR_AF=0.1292;MEINFO=AluUndef,1,268,-;NS=2504;SAS_AF=0.1319;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=CCCGGGTAAGTTAAACATTTTTT	GT	1|0
1	188539457	UW_VH_131	T	<CN0>	100	PASS	AC=4730;AF=0.944489;AFR_AF=0.8858;AMR_AF=0.9669;AN=5008;CIEND=0,498;CIPOS=-452,0;CS=DEL_union;EAS_AF=1;END=188540228;EUR_AF=0.9264;MC=BI_GS_DEL1_B1_P0189_370,SI_BD_977;NS=2504;SAS_AF=0.9693;SVTYPE=DEL	GT	1|1
1	188994948	DEL_pindel_1724	TCAATTCTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=2253;AF=0.44988;AFR_AF=0.4992;AMR_AF=0.4683;AN=5008;CS=DEL_pindel;EAS_AF=0.4048;END=188995283;EUR_AF=0.4493;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.4172;SITEPOST=0.9945;SVTYPE=DEL_ALU	GT	1|0
1	189247039	ALU_umary_ALU_672	A	<INS:ME:ALU>	.	.	AC=1634;AF=0.326278;AFR_AF=0.152;AMR_AF=0.3991;AN=5008;CS=ALU_umary;EAS_AF=0.3849;EUR_AF=0.4185;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.3548;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAATATTCA	GT	0|1
1	190837319	DEL_pindel_1759	CATTAGATCTCGAGAATTTATTCATCTCGTATAACTAAGACTTTGTGCCCTTTGATCAAATCTCTCCATTTCCTCCAGCCCCCTATATTGTGGTAACCCCTATTCTACTCTCTGCATGTTTAGATTTCACATATAAGTTAGATCATGCACTATTTGTGTCTGTGTCTGGCTT	C	.	PASS	AC=3772;AF=0.753195;AFR_AF=0.4818;AMR_AF=0.8026;AN=5008;CS=DEL_pindel;EAS_AF=0.9206;END=190837490;EUR_AF=0.834;NS=2504;SAS_AF=0.8292;SITEPOST=0.9995;SVTYPE=DEL	GT	1|1
1	190874469	ALU_umary_ALU_686	T	<INS:ME:ALU>	.	.	AC=1189;AF=0.23742;AFR_AF=0.1422;AMR_AF=0.232;AN=5008;CS=ALU_umary;EAS_AF=0.2103;EUR_AF=0.3052;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.3282;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGGCTGAAAACTCTTTATATTTGTGTTT	GT	0|1
1	192609798	DEL_pindel_1784	GTCCTCCTCACTTATAGTAGAGACTTACATAGAAAATGAAGTTGATCAGACCACATTTCTCATATGT	G	.	PASS	AC=1871;AF=0.373602;AFR_AF=0.3548;AMR_AF=0.4265;AN=5008;CS=DEL_pindel;EAS_AF=0.2024;END=192609864;EUR_AF=0.4324;NS=2504;SAS_AF=0.4775;SITEPOST=0.9999;SVTYPE=DEL	GT	1|1
1	194451056	UW_VH_1353	A	<CN0>	100	PASS	AC=2727;AF=0.544529;AFR_AF=0.4818;AMR_AF=0.5504;AN=5008;CIEND=0,324;CIPOS=-237,0;CS=DEL_union;EAS_AF=0.6895;END=194454312;EUR_AF=0.6481;MC=YL_CN_CHB_287,YL_CN_IBS_211,BI_GS_DEL1_B3_P0195_22,EM_DL_DEL07125,SI_BD_1025;NS=2504;SAS_AF=0.3691;SVTYPE=DEL	GT	0|1
1	194517604	BI_GS_DEL1_B2_P0195_316	A	<CN0>	100	PASS	AC=2571;AF=0.513379;AFR_AF=0.1679;AMR_AF=0.549;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7083;END=194517863;EUR_AF=0.7157;NS=2504;SAS_AF=0.546;SVTYPE=DEL	GT	1|1
1	194675140	ALU_umary_ALU_708	C	<INS:ME:ALU>	.	.	AC=824;AF=0.164537;AFR_AF=0.0461;AMR_AF=0.1686;AN=5008;CS=ALU_umary;EAS_AF=0.2966;EUR_AF=0.165;MEINFO=AluUndef,13,281,+;NS=2504;SAS_AF=0.1851;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAAATTGAGTATATC	GT	1|1
1	197894025	BI_GS_DEL1_B5_P0198_990	C	<CN0>	100	PASS	AC=2799;AF=0.558906;AFR_AF=0.5272;AMR_AF=0.6124;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6944;END=197894310;EUR_AF=0.4006;MC=UW_VH_1354;NS=2504;SAS_AF=0.5869;SVTYPE=DEL	GT	1|0
1	198003599	UW_VH_4856	T	<CN0>	100	PASS	AC=31;AF=0.0061901;AFR_AF=0.0008;AMR_AF=0.0159;AN=5008;CIEND=0,287;CIPOS=-308,0;CS=DEL_union;EAS_AF=0;END=198007023;EUR_AF=0.0139;MC=YL_CN_PUR_335,BI_GS_DEL1_B4_P0199_1;NS=2504;SAS_AF=0.0051;SVTYPE=DEL	GT	0|1
1	199110049	BI_GS_DEL1_B2_P0200_70	C	<CN0>	100	PASS	AC=968;AF=0.193291;AFR_AF=0.4781;AMR_AF=0.1182;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.003;END=199113807;EUR_AF=0.165;MC=YL_CN_TSI_238,EM_DL_DEL07291,UW_VH_23366,UW_VH_2348,UW_VH_17931,SI_BD_1055;NS=2504;SAS_AF=0.0869;SVTYPE=DEL	GT	1|0
1	205178526	INV_delly_INV00008409	T	<INV>	.	PASS	AC=1615;AF=0.322484;AFR_AF=0.084;AMR_AF=0.4049;AN=5008;CIEND=-184,184;CIPOS=-184,184;CS=INV_delly;EAS_AF=0.4464;END=205178807;EUR_AF=0.4304;IMPRECISE;MC=CINV_delly_INV00008407;NS=2504;SAS_AF=0.3476;SITEPOST=0.99985;SVTYPE=INV	GT	0|1
1	207292375	BI_GS_DEL1_B5_P0208_416	A	<CN0>	100	PASS	AC=2995;AF=0.598043;AFR_AF=0.3396;AMR_AF=0.6326;AN=5008;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0.7351;END=207292595;EUR_AF=0.6282;NS=2504;SAS_AF=0.7505;SVTYPE=DEL	GT	1|1
1	207292405	BI_GS_DEL1_B1_P0208_321	A	<CN0>	100	PASS	AC=2996;AF=0.598243;AFR_AF=0.3351;AMR_AF=0.6326;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7361;END=207293149;EUR_AF=0.6332;MC=EM_DL_DEL1073798,SI_BD_1108;NS=2504;SAS_AF=0.7515;SVTYPE=DEL	GT	1|1
1	207542027	DUP_gs_CNV_1_207542027_207545525	A	<CN0>,<CN2>	.	PASS	AC=2263,3;AF=0.451877,0.00059904;AFR_AF=0.3759,0.0008;AMR_AF=0.4582,0;AN=5008;CS=DUP_gs;EAS_AF=0.4177,0.001;END=207545525;EUR_AF=0.506,0.001;MC=UW_VH_3,UW_VH_18858,YL_CN_IBS_221,BI_GS_DEL1_B1_P0208_567,SI_BD_1109,UW_VH_25170,EM_DL_DEL07614;NS=2504;SAS_AF=0.5297,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
1	209935335	DEL_pindel_1918	AGCAGGAGAAGCCTGTGTGGCTCTGAAAGCTTGAGTGGGCTACTTTGGTTTTGTGGATCTGAAACATTGTCTTCGTCCTGTAATGAATTACCACAGACTGGGTGGCTTAAATAACAGAAATTTATTTCTTACAATTCTGGAGTCTGGAGTTCTAAACCCATGGATTCTGCAGATCTGGTGTCTGATGAGAGCACTCTTCCCACTATGCAGATGGCCTTCTTCTCATTGTGTCCTCACAAGGCAGAGAGCAGAGAGAGAAAGCAAGCTCTCTCGTGTCTCTTCTAATAATGGCACTAATCCCATTCATGAGGGCTACCTGCTCTGACCTAATTATTTCTCAAAGTCTCCACCTCCTAATACTATCACATTGGGAGATAGGATTTCAACACACAGATTTGGGCGGGGGGACAATAAACACTCAGTCCATAACAAACATGATGGTTAGTTCTTCCTTCCGAAATCATCAGGAGAGTCTTTCAAGAGGCTCCAGGCAGTGGTTTTCAGCATTCCCCACTTGCCTTCCAGGTGACAGGCACCAGCTCTGAAGTCTTTCCAGCCCAGCATCCTCCTCCCTCAGGCATCTGCAGGGATCTGTCTGACCACCTCTCCTCACAGGCTGGGGGCCTTCCTCCACAGGACACTCCCATCAAGAAGCCACCCAAACACCACCGTGGTAAGAGCAGAGCCTCCCTCACTCCACAGGGCCTGCAGAGAATCCTGAGACAACTGTCCCAGCTCACTG	A	.	PASS	AC=1132;AF=0.226038;AFR_AF=0.413;AMR_AF=0.1873;AN=5008;CS=DEL_pindel;EAS_AF=0.1399;END=209936076;EUR_AF=0.1511;NS=2504;SAS_AF=0.1667;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
1	210078053	UW_VH_24770	G	<CN0>	100	PASS	AC=2656;AF=0.530351;AFR_AF=0.5915;AMR_AF=0.4697;AN=5008;CIEND=0,481;CIPOS=-422,0;CS=DEL_union;EAS_AF=0.4524;END=210085978;EUR_AF=0.5716;MC=YL_CN_IBS_222,UW_VH_24934,UW_VH_133,UW_VH_5809,EM_DL_DEL07696,UW_VH_23334,BI_GS_DEL1_B2_P0211_64,UW_VH_20901,UW_VH_4681;NS=2504;SAS_AF=0.5286;SVTYPE=DEL	GT	1|1
1	211965009	BI_GS_DEL1_B2_P0212_692	A	<CN0>	100	PASS	AC=52;AF=0.0103834;AFR_AF=0.0015;AMR_AF=0.0202;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=211965782;EUR_AF=0.0288;MC=UW_VH_4415,SI_BD_1132;NS=2504;SAS_AF=0.0072;SVTYPE=DEL	GT	1|0
1	212471179	UW_VH_12590	T	<CN0>	100	PASS	AC=3518;AF=0.702476;AFR_AF=0.9448;AMR_AF=0.6556;AN=5008;CIEND=0,444;CIPOS=-471,0;CS=DEL_union;EAS_AF=0.5298;END=212472619;EUR_AF=0.6441;MC=UW_VH_13671,UW_VH_1685;NS=2504;SAS_AF=0.6462;SVTYPE=DEL	GT	1|0
1	213002037	YL_CN_FIN_274	A	<CN0>	100	PASS	AC=100;AF=0.019968;AFR_AF=0.0008;AMR_AF=0.0187;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0119;END=213013756;EUR_AF=0.0368;MC=EM_DL_DEL07763,BI_GS_DEL1_B3_P0214_1,UW_VH_2155,YL_CN_STU_278;NS=2504;SAS_AF=0.0378;SVTYPE=DEL	GT	1|0
1	213083966	YL_CN_PEL_289	A	<CN0>	100	PASS	AC=3551;AF=0.709065;AFR_AF=0.3192;AMR_AF=0.8559;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9087;END=213086597;EUR_AF=0.7813;MC=YL_CN_IBS_225,YL_CN_GWD_390,YL_CN_CEU_354,YL_CN_ASW_298,UW_VH_135,YL_CN_GIH_210,YL_CN_CHS_296,YL_CN_CLM_230,YL_CN_PJL_325,YL_CN_BEB_233,YL_CN_STU_279,BI_GS_DEL1_B1_P0214_59,YL_CN_PUR_354,SI_BD_1136;NS=2504;SAS_AF=0.8517;SVTYPE=DEL	GT	1|0
1	217024868	ALU_umary_ALU_789	G	<INS:ME:ALU>	.	.	AC=120;AF=0.0239617;AFR_AF=0.0045;AMR_AF=0.0346;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0755;MEINFO=AluYa3_5,1,263,+;NS=2504;SAS_AF=0.0143;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=AAAAAGAGGCCAGAG	GT	0|1
1	217457929	BI_GS_DEL1_B3_P0218_21	C	<CN0>	100	PASS	AC=1002;AF=0.20008;AFR_AF=0.2685;AMR_AF=0.2536;AN=5008;CIEND=-7,8;CIPOS=-7,8;CS=DEL_union;EAS_AF=0.0942;END=217458372;EUR_AF=0.1074;MC=DEL_pindel_2011,UW_VH_1355;NS=2504;SAS_AF=0.274;SVTYPE=DEL	GT	0|1
1	217754074	DEL_pindel_2024	TAGAAAGGCAGAATCTCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2279;AF=0.455072;AFR_AF=0.379;AMR_AF=0.4553;AN=5008;CS=DEL_pindel;EAS_AF=0.6399;END=217754377;EUR_AF=0.4364;MEINFO=AluYb6_2,20,281,+;NS=2504;SAS_AF=0.3865;SITEPOST=0.9948;SVTYPE=DEL_ALU	GT	1|0
1	217913513	ALU_umary_ALU_795	T	<INS:ME:ALU>	.	.	AC=977;AF=0.195088;AFR_AF=0.0174;AMR_AF=0.1916;AN=5008;CS=ALU_umary;EAS_AF=0.4067;EUR_AF=0.1431;MEINFO=AluUndef,5,278,-;NS=2504;SAS_AF=0.273;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=GGCCTTTCTTCTT	GT	1|0
1	218245628	DEL_pindel_2030	TAAAAAAAGAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAGACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAA	T	.	PASS	AC=983;AF=0.196286;AFR_AF=0.0522;AMR_AF=0.3401;AN=5008;CS=DEL_pindel;EAS_AF=0.119;END=218246489;EUR_AF=0.3529;MEINFO=LINE1,5537,5600,+;NS=2504;SAS_AF=0.2076;SITEPOST=0.9905;SVTYPE=DEL_LINE1	GT	1|0
1	219574692	ALU_umary_ALU_812	T	<INS:ME:ALU>	.	.	AC=815;AF=0.16274;AFR_AF=0.0537;AMR_AF=0.2133;AN=5008;CS=ALU_umary;EAS_AF=0.2659;EUR_AF=0.1402;MEINFO=AluYa5,26,281,-;NS=2504;SAS_AF=0.1912;SITEPOST=1;SVLEN=255;SVTYPE=ALU;TSD=GCCTTTTCTTTTTTT	GT	0|1
1	222374169	UW_VH_143	T	<CN0>	100	PASS	AC=1259;AF=0.251398;AFR_AF=0.2375;AMR_AF=0.2738;AN=5008;CIEND=0,427;CIPOS=-562,0;CS=DEL_union;EAS_AF=0.1389;END=222380531;EUR_AF=0.3181;MC=EM_DL_DEL08275,BI_GS_DEL1_B4_P0223_95,BI_GS_DEL1_B2_P0223_307,YL_CN_BEB_239;NS=2504;SAS_AF=0.3016;SVTYPE=DEL	GT	1|0
1	225996433	ALU_umary_ALU_836	T	<INS:ME:ALU>	.	.	AC=855;AF=0.170727;AFR_AF=0.0998;AMR_AF=0.2003;AN=5008;CS=ALU_umary;EAS_AF=0.1944;EUR_AF=0.2425;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1472;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAGTAACGAAT	GT	1|0
1	228024093	DEL_pindel_2084	TAATAAAAGCTTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAA	T	.	PASS	AC=3572;AF=0.713259;AFR_AF=0.6982;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.627;END=228024405;EUR_AF=0.7535;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7986;SITEPOST=0.9718;SVTYPE=DEL_ALU	GT	1|0
1	228959933	ALU_umary_ALU_845	T	<INS:ME:ALU>	.	.	AC=1324;AF=0.264377;AFR_AF=0.354;AMR_AF=0.2709;AN=5008;CS=ALU_umary;EAS_AF=0.2153;EUR_AF=0.2893;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.1636;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CTTTGTATAGTTTTT	GT	1|0
1	231085161	ALU_umary_ALU_854	A	<INS:ME:ALU>	.	.	AC=1199;AF=0.239417;AFR_AF=0.239;AMR_AF=0.2507;AN=5008;CS=ALU_umary;EAS_AF=0.2282;EUR_AF=0.2505;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0.2321;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAAAAAAAAAA	GT	0|1
1	232458585	BI_GS_DEL1_B1_P0233_442	A	<CN0>	100	PASS	AC=1253;AF=0.2502;AFR_AF=0.1679;AMR_AF=0.2968;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2024;END=232460249;EUR_AF=0.2853;MC=YL_CN_PEL_300,YL_CN_STU_293,UW_VH_10822,EM_DL_DEL1084800,UW_VH_13549,YL_CN_PJL_339,UW_VH_1356;NS=2504;SAS_AF=0.3415;SVTYPE=DEL	GT	0|1
1	232587774	ALU_umary_ALU_865	T	<INS:ME:ALU>	.	.	AC=1529;AF=0.305312;AFR_AF=0.2655;AMR_AF=0.3545;AN=5008;CS=ALU_umary;EAS_AF=0.4415;EUR_AF=0.1909;MEINFO=AluUndef,6,281,+;NS=2504;SAS_AF=0.3016;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AAAAATGTGGCATT	GT	1|1
1	232836575	DEL_pindel_2145	CACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATTTGAGTTCAGGAGTTTGAAATCAGCCTGACCAACATGGTGAAACTCTGTCTCTAGTAAAAATACAAAAATAAGCCGGGCGTGGTGGTGGGCATCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATTGCTTG	C	.	PASS	AC=1812;AF=0.361821;AFR_AF=0.1573;AMR_AF=0.4035;AN=5008;CS=DEL_pindel;EAS_AF=0.4752;END=232836759;EUR_AF=0.3748;NS=2504;SAS_AF=0.4785;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
1	233962115	SI_BD_1242	G	<CN0>	100	PASS	AC=3930;AF=0.784744;AFR_AF=0.9682;AMR_AF=0.6715;AN=5008;CIEND=-50,212;CIPOS=-212,50;CS=DEL_union;EAS_AF=0.7847;END=233963557;EUR_AF=0.7406;MC=YL_CN_PEL_301,YL_CN_PJL_340,YL_CN_MXL_240,EM_DL_DEL1085517,YL_CN_KHV_343,YL_CN_ACB_336,YL_CN_CLM_245,YL_CN_STU_294,YL_CN_JPT_320,YL_CN_TSI_263,YL_CN_ESN_312,YL_CN_ASW_318,YL_CN_FIN_294,YL_CN_PUR_375,YL_CN_GBR_303;NS=2504;SAS_AF=0.6626;SVTYPE=DEL	GT	0|1
1	234805728	ALU_umary_ALU_884	T	<INS:ME:ALU>	.	.	AC=1603;AF=0.320088;AFR_AF=0.4077;AMR_AF=0.3141;AN=5008;CS=ALU_umary;EAS_AF=0.1429;EUR_AF=0.4274;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.2781;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGATTATATGTTTTCT	GT	1|1
1	236548998	YL_CN_IBS_251	T	<CN0>	100	PASS	AC=4434;AF=0.885383;AFR_AF=0.8336;AMR_AF=0.9107;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9395;END=236551425;EUR_AF=0.8559;MC=YL_CN_ITU_321;NS=2504;SAS_AF=0.9121;SVTYPE=DEL	GT	1|1
1	236594925	DEL_pindel_2199	TAAGACCCCAGGCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1543;AF=0.308107;AFR_AF=0.1271;AMR_AF=0.3963;AN=5008;CS=DEL_pindel;EAS_AF=0.25;END=236595250;EUR_AF=0.4632;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3906;SITEPOST=0.9992;SVTYPE=DEL_ALU	GT	0|1
1	237569208	ALU_umary_ALU_889	T	<INS:ME:ALU>	.	.	AC=1071;AF=0.213858;AFR_AF=0.0961;AMR_AF=0.2089;AN=5008;CS=ALU_umary;EAS_AF=0.2738;EUR_AF=0.2495;MEINFO=AluYa5,1,277,-;NS=2504;SAS_AF=0.2781;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=GAAAAAACTTTCTT	GT	1|1
1	239780157	ALU_umary_ALU_899	A	<INS:ME:ALU>	.	.	AC=589;AF=0.117612;AFR_AF=0.2315;AMR_AF=0.0605;AN=5008;CS=ALU_umary;EAS_AF=0.0595;EUR_AF=0.1074;MEINFO=AluYb8,1,276,+;NS=2504;SAS_AF=0.0746;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AAAAATATTCCA	GT	0|1
1	240134858	ALU_umary_ALU_901	A	<INS:ME:ALU>	.	.	AC=465;AF=0.0928514;AFR_AF=0.0446;AMR_AF=0.0836;AN=5008;CS=ALU_umary;EAS_AF=0.0774;EUR_AF=0.161;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1104;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0|1
1	240616990	DEL_pindel_2223	TAAAAATGGAAGGCATAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAGACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCTGCCTCAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2731;AF=0.545327;AFR_AF=0.5144;AMR_AF=0.5893;AN=5008;CS=DEL_pindel;EAS_AF=0.5188;END=240617314;EUR_AF=0.5915;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5358;SITEPOST=0.9904;SVTYPE=DEL_ALU	GT	1|0
1	241149856	DEL_pindel_2235	TTAAACACCACTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3841;AF=0.766973;AFR_AF=0.77;AMR_AF=0.7666;AN=5008;CS=DEL_pindel;EAS_AF=0.7639;END=241150181;EUR_AF=0.7465;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.7873;SITEPOST=0.9753;SVTYPE=DEL_ALU	GT	0|1
1	241360537	DEL_pindel_2240	ACTAATCAAAGTATCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=3132;AF=0.625399;AFR_AF=0.6067;AMR_AF=0.6844;AN=5008;CS=DEL_pindel;EAS_AF=0.6815;END=241360852;EUR_AF=0.6322;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.544;SITEPOST=0.96105;SVTYPE=DEL_ALU	GT	1|0
1	241586225	BI_GS_DEL1_B5_P0242_742	G	<CN0>	100	PASS	AC=2461;AF=0.491414;AFR_AF=0.2905;AMR_AF=0.4971;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7639;END=241586489;EUR_AF=0.4085;NS=2504;SAS_AF=0.5634;SVTYPE=DEL	GT	1|1
1	243127774	BI_GS_DEL1_B2_P0244_78	C	<CN0>	100	PASS	AC=1536;AF=0.306709;AFR_AF=0.2315;AMR_AF=0.402;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3889;END=243129222;EUR_AF=0.2972;MC=UW_VH_5575,YL_CN_GBR_311,YL_CN_CHB_346,YL_CN_CHS_334,UW_VH_4,YL_CN_FIN_304,SI_BD_1307,YL_CN_GWD_420,YL_CN_PEL_315,YL_CN_JPT_334,YL_CN_CDX_295,UW_VH_19306,YL_CN_CEU_383,YL_CN_TSI_276,YL_CN_ASW_329;NS=2504;SAS_AF=0.2658;SVTYPE=DEL	GT	0|1
1	243782747	BI_GS_DEL1_B1_P0244_512	A	<CN0>	100	PASS	AC=2169;AF=0.433107;AFR_AF=0.1233;AMR_AF=0.5605;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5;END=243783759;EUR_AF=0.665;MC=YL_CN_IBS_254,YL_CN_KHV_355,YL_CN_JPT_335,SI_BD_1310,EM_DL_DEL1089702,YL_CN_STU_304,YL_CN_PUR_387,UW_VH_159;NS=2504;SAS_AF=0.454;SVTYPE=DEL	GT	1|1
1	246167282	DEL_pindel_2307	AGGGCATGGGAGCAAAACCACATGCTTTGGCTCAGACCTCGATTGGAATTCGGGCACCGCCACTTACTAAGGGGCCTTCTCAAGCCTGTCTCCTATCT	A	.	PASS	AC=1311;AF=0.261781;AFR_AF=0.062;AMR_AF=0.4438;AN=5008;CS=DEL_pindel;EAS_AF=0.0734;END=246167379;EUR_AF=0.5398;NS=2504;SAS_AF=0.3108;SITEPOST=0.9991;SVTYPE=DEL	GT	1|1
1	248839443	YL_CN_BEB_277	C	<CN0>	100	PASS	AC=4036;AF=0.805911;AFR_AF=0.5696;AMR_AF=0.9063;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7837;END=248841018;EUR_AF=0.9175;NS=2504;SAS_AF=0.9622;SVTYPE=DEL	GT	1|1
2	296361	DEL_pindel_2367	AGTGCTGACAACCAGGTGTGATACCCTCACATGTACAAGCACTGTGCATTTCAGAGGTGACCTT	A	.	PASS	AC=924;AF=0.184505;AFR_AF=0.1203;AMR_AF=0.1801;AN=5008;CS=DEL_pindel;EAS_AF=0.1706;END=296424;EUR_AF=0.2376;NS=2504;SAS_AF=0.2342;SITEPOST=0.9994;SVTYPE=DEL	GT	0|1
2	2539950	ALU_umary_ALU_965	T	<INS:ME:ALU>	.	.	AC=1862;AF=0.371805;AFR_AF=0.1362;AMR_AF=0.487;AN=5008;CS=ALU_umary;EAS_AF=0.4534;EUR_AF=0.4364;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4581;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TCAGCGGGTATTTTTT	GT	0|1
2	2798774	BI_GS_DEL1_B5_P0253_926	C	<CN0>	100	PASS	AC=2007;AF=0.400759;AFR_AF=0.4584;AMR_AF=0.438;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1796;END=2799246;EUR_AF=0.6093;MC=UW_VH_162,UW_VH_10421;NS=2504;SAS_AF=0.3098;SVTYPE=DEL	GT	1|1
2	3718461	ALU_umary_ALU_971	G	<INS:ME:ALU>	.	.	AC=691;AF=0.137979;AFR_AF=0.2428;AMR_AF=0.0951;AN=5008;CS=ALU_umary;EAS_AF=0.0347;EUR_AF=0.16;MEINFO=AluUndef,1,268,+;NS=2504;SAS_AF=0.1104;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=AGAAGG	GT	1|1
2	5562912	ALU_umary_ALU_979	T	<INS:ME:ALU>	.	.	AC=1083;AF=0.216254;AFR_AF=0.0431;AMR_AF=0.3012;AN=5008;CS=ALU_umary;EAS_AF=0.2976;EUR_AF=0.1988;MEINFO=AluUndef,16,281,+;NS=2504;SAS_AF=0.3241;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=AAAAAATTCTGAGTGGT	GT	1|0
2	6693415	BI_GS_DEL1_B1_P0257_656	T	<CN0>	100	PASS	AC=2;AF=0.00039936;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=-20,21;CIPOS=-20,21;CS=DEL_union;EAS_AF=0;END=6707844;EUR_AF=0.002;MC=YL_CN_FIN_343,EM_DL_DEL49960;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0|1
2	9959221	DEL_pindel_2583	CCCCAGTTTTTTTTTTTGTTTTTTTTTTTGTTTTGTTTTGTTTTTTTTTTGTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCGAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	C	.	PASS	AC=2650;AF=0.529153;AFR_AF=0.5068;AMR_AF=0.5245;AN=5008;CS=DEL_pindel;EAS_AF=0.625;END=9959571;EUR_AF=0.4821;MEINFO=AluYb8,3,281,-;NS=2504;SAS_AF=0.5123;SITEPOST=0.97525;SVTYPE=DEL_ALU	GT	1|0
2	11426375	ALU_umary_ALU_1003	T	<INS:ME:ALU>	.	.	AC=2021;AF=0.403554;AFR_AF=0.2481;AMR_AF=0.4409;AN=5008;CS=ALU_umary;EAS_AF=0.4891;EUR_AF=0.4513;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4499;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TAAGCAGATGTTTTT	GT	0|1
2	15163766	ALU_umary_ALU_1018	T	<INS:ME:ALU>	.	.	AC=1122;AF=0.224042;AFR_AF=0.2564;AMR_AF=0.1499;AN=5008;CS=ALU_umary;EAS_AF=0.1478;EUR_AF=0.2575;MEINFO=AluUndef,1,273,-;NS=2504;SAS_AF=0.2771;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AAGATTATATCTT	GT	1|0
2	15166285	DEL_pindel_2717	TAAAAGTCTTTTCTGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2292;AF=0.457668;AFR_AF=0.4531;AMR_AF=0.4914;AN=5008;CS=DEL_pindel;EAS_AF=0.5248;END=15166611;EUR_AF=0.4185;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.411;SITEPOST=0.9774;SVTYPE=DEL_ALU	GT	0|1
2	15519553	ALU_umary_ALU_1019	A	<INS:ME:ALU>	.	.	AC=2053;AF=0.409944;AFR_AF=0.4334;AMR_AF=0.4697;AN=5008;CS=ALU_umary;EAS_AF=0.1875;EUR_AF=0.5378;MEINFO=AluYc1,7,281,+;NS=2504;SAS_AF=0.4335;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAGAAGCTGATGGA	GT	1|1
2	16271567	EM_DL_DEL50186	T	<CN0>	100	PASS	AC=2669;AF=0.532947;AFR_AF=0.6536;AMR_AF=0.598;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.256;END=16273799;EUR_AF=0.7227;MC=BI_GS_DEL1_B1_P0267_243,YL_CN_STU_339,UW_VH_15145,UW_VH_11076,YL_CN_KHV_395,UW_VH_2151,YL_CN_CHB_390,UW_VH_14722;NS=2504;SAS_AF=0.4141;SVTYPE=DEL	GT	1|1
2	17585118	UW_VH_3738	A	<CN0>	100	PASS	AC=764;AF=0.152556;AFR_AF=0.3207;AMR_AF=0.1816;AN=5008;CIEND=0,394;CIPOS=-439,0;CS=DEL_union;EAS_AF=0.0873;END=17590610;EUR_AF=0.0487;MC=BI_GS_DEL1_B5_P0268_792,EM_DL_DEL50227,YL_CN_MXL_282,SI_BD_1545;NS=2504;SAS_AF=0.0787;SVTYPE=DEL	GT	1|0
2	18306417	ALU_umary_ALU_1029	T	<INS:ME:ALU>	.	.	AC=207;AF=0.0413339;AFR_AF=0.1029;AMR_AF=0.0346;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0169;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.0307;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAAGGAAAAAAT	GT	1|0
2	20666665	DEL_pindel_2820	TAAAATGCCATGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAA	T	.	PASS	AC=3227;AF=0.644369;AFR_AF=0.674;AMR_AF=0.6484;AN=5008;CS=DEL_pindel;EAS_AF=0.7411;END=20666972;EUR_AF=0.5;MEINFO=AluYa4b,1,281,+;NS=2504;SAS_AF=0.6503;SITEPOST=0.98225;SVTYPE=DEL_ALU	GT	1|1
2	23191016	L1_umary_LINE1_267	T	<INS:ME:LINE1>	.	.	AC=2278;AF=0.454872;AFR_AF=0.3139;AMR_AF=0.4308;AN=5008;CS=L1_umary;EAS_AF=0.5853;EUR_AF=0.4573;MEINFO=LINE1,1,6018,-;NS=2504;SAS_AF=0.5256;SITEPOST=1;SVLEN=6017;SVTYPE=LINE1;TSD=CCTGAGACTGGGTAATTTAT	GT	1|0
2	26623683	ALU_umary_ALU_1074	T	<INS:ME:ALU>	.	.	AC=878;AF=0.175319;AFR_AF=0.1324;AMR_AF=0.1844;AN=5008;CS=ALU_umary;EAS_AF=0.0139;EUR_AF=0.2992;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.2658;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GGAAGAACTGATTTT	GT	0|1
2	27527254	ALU_umary_ALU_1075	A	<INS:ME:ALU>	.	.	AC=1682;AF=0.335863;AFR_AF=0.3404;AMR_AF=0.3386;AN=5008;CS=ALU_umary;EAS_AF=0.3393;EUR_AF=0.3559;MEINFO=AluY,2,196,-;NS=2504;SAS_AF=0.3037;SITEPOST=1;SVLEN=194;SVTYPE=ALU;TSD=null	GT	0|1
2	28353920	DEL_pindel_2961	TTATTATTATTATTATTATTATTATTATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2985;AF=0.596046;AFR_AF=0.6422;AMR_AF=0.4942;AN=5008;CS=DEL_pindel;EAS_AF=0.4534;END=28354247;EUR_AF=0.6521;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.6953;SITEPOST=0.9966;SVTYPE=DEL_ALU	GT	1|1
2	28661665	DEL_pindel_2968	TCTAGCTCGAGTTCAGATCTCTTATGTGAGCCCCTGACGCTGCGGACCTGCCCC	T	.	PASS	AC=1557;AF=0.310903;AFR_AF=0.1914;AMR_AF=0.2464;AN=5008;CS=DEL_pindel;EAS_AF=0.6488;END=28661718;EUR_AF=0.2386;NS=2504;SAS_AF=0.2444;SITEPOST=0.9994;SVTYPE=DEL	GT	0|1
2	28720773	BI_GS_DEL1_B1_P0279_634	A	<CN0>	100	PASS	AC=46;AF=0.0091853;AFR_AF=0;AMR_AF=0.0216;AN=5008;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0;END=28721321;EUR_AF=0.0278;MC=UW_VH_3148;NS=2504;SAS_AF=0.0031;SVTYPE=DEL	GT	1|0
2	31559696	ALU_umary_ALU_1092	C	<INS:ME:ALU>	.	.	AC=3410;AF=0.680911;AFR_AF=0.7012;AMR_AF=0.647;AN=5008;CS=ALU_umary;EAS_AF=0.6825;EUR_AF=0.672;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6851;SITEPOST=0.9999;SVLEN=280;SVTYPE=ALU;TSD=AAAAAGAGAAAGCCCC	GT	1|1
2	31952210	ALU_umary_ALU_1094	G	<INS:ME:ALU>	.	.	AC=3223;AF=0.64357;AFR_AF=0.6218;AMR_AF=0.6484;AN=5008;CS=ALU_umary;EAS_AF=0.6558;EUR_AF=0.6481;MEINFO=AluYa5,2,281,+;NS=2504;SAS_AF=0.6524;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAAGTAGAATGG	GT	1|1
2	33091742	L1_umary_LINE1_278	C	<INS:ME:LINE1>	.	.	AC=1597;AF=0.31889;AFR_AF=0.447;AMR_AF=0.2334;AN=5008;CS=L1_umary;EAS_AF=0.2431;EUR_AF=0.2296;MEINFO=LINE1,860,6001,-;NS=2504;SAS_AF=0.3763;SITEPOST=0.9798;SVLEN=5141;SVTYPE=LINE1;TSD=null	GT	1|0
2	33764554	CINV_delly_INV00056184	G	<INV>	.	PASS	AC=434;AF=0.0866613;AFR_AF=0.0212;AMR_AF=0.1859;AN=5008;CIEND=-170,170;CIPOS=-170,170;CS=CINV_delly;EAS_AF=0.0069;END=33765272;EUR_AF=0.1521;IMPRECISE;NS=2504;SAS_AF=0.1196;SVTYPE=INV	GT	0|1
2	34255392	ALU_umary_ALU_1117	T	<INS:ME:ALU>	.	.	AC=1486;AF=0.296725;AFR_AF=0.4017;AMR_AF=0.2695;AN=5008;CS=ALU_umary;EAS_AF=0.2897;EUR_AF=0.2813;MEINFO=AluUndef,8,281,-;NS=2504;SAS_AF=0.1973;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=CCATTCACAGTTCT	GT	1|1
2	34523576	SI_BD_1647	T	<CN0>	100	PASS	AC=2678;AF=0.534744;AFR_AF=0.3918;AMR_AF=0.6326;AN=5008;CIEND=-86,342;CIPOS=-342,131;CS=DEL_union;EAS_AF=0.8244;END=34525669;EUR_AF=0.4622;MC=UW_VH_1966,YL_CN_YRI_486,UW_VH_6136,EM_DL_DEL50926;NS=2504;SAS_AF=0.4346;SVTYPE=DEL	GT	1|1
2	34643630	DEL_pindel_3116	TAACTCTCTTGGAATTTCTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGCGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGTCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2583;AF=0.515775;AFR_AF=0.5605;AMR_AF=0.4885;AN=5008;CS=DEL_pindel;EAS_AF=0.4762;END=34643937;EUR_AF=0.4841;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.5481;SITEPOST=0.9944;SVTYPE=DEL_ALU	GT	1|1
2	34965683	BI_GS_DEL1_B3_P0285_43	C	<CN0>	100	PASS	AC=133;AF=0.0265575;AFR_AF=0.0045;AMR_AF=0.0432;AN=5008;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0;END=34967221;EUR_AF=0.0885;MC=UW_VH_174,SI_BD_1655,EM_DL_DEL10526085;NS=2504;SAS_AF=0.0082;SVTYPE=DEL	GT	0|1
2	35975766	YL_CN_CLM_306	A	<CN0>	100	PASS	AC=2303;AF=0.459864;AFR_AF=0.5855;AMR_AF=0.3602;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4345;END=35997215;EUR_AF=0.4642;MC=BI_GS_CNV_2_35975937_35996316,EM_DL_DEL50966,SI_BD_1663;NS=2504;SAS_AF=0.3824;SVTYPE=DEL	GT	0|1
2	36955660	DEL_pindel_3170	TAAAGAAAAAATATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAGAAA	T	.	PASS	AC=2266;AF=0.452476;AFR_AF=0.3608;AMR_AF=0.4611;AN=5008;CS=DEL_pindel;EAS_AF=0.4673;END=36955976;EUR_AF=0.5427;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4622;SITEPOST=0.9889;SVTYPE=DEL_ALU	GT	1|1
2	38956737	DUP_gs_CNV_2_38956737_38974142	G	<CN2>	.	PASS	AC=107;AF=0.0213658;AFR_AF=0.0053;AMR_AF=0.0259;AN=5008;CS=DUP_gs;EAS_AF=0;END=38974142;EUR_AF=0.0696;MC=DUP_delly_DUP51871;NS=2504;SAS_AF=0.0123;SITEPOST=1;SVTYPE=DUP	GT	1|0
2	39071477	DEL_pindel_3202	TAAAGAAATGATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3383;AF=0.675519;AFR_AF=0.5068;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.7113;END=39071819;EUR_AF=0.7336;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.7863;SITEPOST=0.9546;SVTYPE=DEL_ALU	GT	1|1
2	39315339	ALU_umary_ALU_1136	T	<INS:ME:ALU>	.	.	AC=2389;AF=0.477037;AFR_AF=0.5023;AMR_AF=0.4697;AN=5008;CS=ALU_umary;EAS_AF=0.4673;EUR_AF=0.4891;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4458;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=ATCAGTGGTTCTT	GT	0|1
2	40446946	DEL_pindel_3235	CTTTGTTTGCTATGCATGAGATTGCTTGAAAAATGTGATTTAGCTCCAACAGAGCCTCCCTACTATAGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAAAATCAATACATCTTTCTGTCAAAATT	C	.	PASS	AC=2643;AF=0.527756;AFR_AF=0.4743;AMR_AF=0.6859;AN=5008;CS=DEL_pindel;EAS_AF=0.3502;END=40447073;EUR_AF=0.7068;NS=2504;SAS_AF=0.4867;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
2	40613688	ALU_umary_ALU_1143	G	<INS:ME:ALU>	.	.	AC=1099;AF=0.219449;AFR_AF=0.118;AMR_AF=0.2507;AN=5008;CS=ALU_umary;EAS_AF=0.0962;EUR_AF=0.3976;MEINFO=AluUndef,1,243,+;NS=2504;SAS_AF=0.2781;SITEPOST=1;SVLEN=242;SVTYPE=ALU;TSD=AAAAAAGAGATAATG	GT	1|1
2	41775944	UW_VH_1967	T	<CN0>	100	PASS	AC=1097;AF=0.21905;AFR_AF=0.0817;AMR_AF=0.2075;AN=5008;CIEND=0,453;CIPOS=-409,0;CS=DEL_union;EAS_AF=0.1062;END=41781288;EUR_AF=0.3777;MC=YL_CN_CDX_362,YL_CN_GIH_290,BI_GS_DEL1_B5_P0292_861,UW_VH_19271,YL_CN_CLM_317,YL_CN_PEL_380,YL_CN_STU_371;NS=2504;SAS_AF=0.3661;SVTYPE=DEL	GT	0|1
2	41973027	YL_CN_BEB_318	T	<CN0>	100	PASS	AC=3924;AF=0.783546;AFR_AF=0.8109;AMR_AF=0.8458;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7431;END=41976041;EUR_AF=0.7575;NS=2504;SAS_AF=0.771;SVTYPE=DEL	GT	1|1
2	43024076	ALU_umary_ALU_1149	C	<INS:ME:ALU>	.	.	AC=2333;AF=0.465855;AFR_AF=0.4932;AMR_AF=0.4553;AN=5008;CS=ALU_umary;EAS_AF=0.498;EUR_AF=0.4056;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.4652;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CATTTTTTC	GT	0|1
2	46196199	ALU_umary_ALU_1167	T	<INS:ME:ALU>	.	.	AC=946;AF=0.188898;AFR_AF=0.1997;AMR_AF=0.1787;AN=5008;CS=ALU_umary;EAS_AF=0.0724;EUR_AF=0.2197;MEINFO=AluYb8,2,280,+;NS=2504;SAS_AF=0.2699;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAAATATTCATTGAT	GT	0|1
2	46910132	DEL_pindel_3338	ATCAGCTGCCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2706;AF=0.540335;AFR_AF=0.6014;AMR_AF=0.5735;AN=5008;CS=DEL_pindel;EAS_AF=0.5119;END=46910448;EUR_AF=0.4881;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5174;SITEPOST=0.9968;SVTYPE=DEL_ALU	GT	0|1
2	46928953	ALU_umary_ALU_1171	T	<INS:ME:ALU>	.	.	AC=2273;AF=0.453874;AFR_AF=0.5348;AMR_AF=0.4683;AN=5008;CS=ALU_umary;EAS_AF=0.3829;EUR_AF=0.3966;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4663;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TTT	GT	0|1
2	47319298	ALU_umary_ALU_1172	T	<INS:ME:ALU>	.	.	AC=1437;AF=0.286941;AFR_AF=0.2844;AMR_AF=0.3199;AN=5008;CS=ALU_umary;EAS_AF=0.249;EUR_AF=0.3499;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0.2413;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=GCATTTTCTAATTTTTCT	GT	1|0
2	48276534	ALU_umary_ALU_1173	A	<INS:ME:ALU>	.	.	AC=153;AF=0.0305511;AFR_AF=0.0053;AMR_AF=0.0461;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.1074;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.0061;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAATTCAAATGCA	GT	0|1
2	48990526	BI_GS_DEL1_B5_P0299_1144	T	<CN0>	100	PASS	AC=693;AF=0.138379;AFR_AF=0.1846;AMR_AF=0.1455;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0129;END=48991166;EUR_AF=0.2525;NS=2504;SAS_AF=0.0828;SVTYPE=DEL	GT	0|1
2	49612882	DEL_pindel_3413	ACAATATTTTTACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCTGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=3546;AF=0.708067;AFR_AF=0.6702;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.751;END=49613205;EUR_AF=0.7068;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.7188;SITEPOST=0.9657;SVTYPE=DEL_ALU	GT	1|1
2	50602644	ALU_umary_ALU_1192	T	<INS:ME:ALU>	.	.	AC=2516;AF=0.502396;AFR_AF=0.5983;AMR_AF=0.4568;AN=5008;CS=ALU_umary;EAS_AF=0.6796;EUR_AF=0.3598;MEINFO=AluUndef,1,278,-;NS=2504;SAS_AF=0.3691;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AATTCTGAAGCTCTT	GT	0|1
2	51469239	ALU_umary_ALU_1198	T	<INS:ME:ALU>	.	.	AC=476;AF=0.0950479;AFR_AF=0.0961;AMR_AF=0.0951;AN=5008;CS=ALU_umary;EAS_AF=0.1042;EUR_AF=0.0974;MEINFO=AluYb8,34,280,+;NS=2504;SAS_AF=0.0818;SITEPOST=1;SVLEN=246;SVTYPE=ALU;TSD=AAAATCATAAATTTT	GT	1|0
2	51926595	UW_VH_182	A	<CN0>	100	PASS	AC=339;AF=0.0676917;AFR_AF=0.0045;AMR_AF=0.1715;AN=5008;CIEND=0,426;CIPOS=-547,0;CS=DEL_union;EAS_AF=0.002;END=51927817;EUR_AF=0.1173;MC=BI_GS_DEL1_B5_P0302_1006,EM_DL_DEL10532247,SI_BD_1759;NS=2504;SAS_AF=0.0961;SVTYPE=DEL	GT	0|1
2	52749687	BI_GS_DEL1_B1_P0303_584	C	<CN0>	100	PASS	AC=1445;AF=0.288538;AFR_AF=0.0492;AMR_AF=0.2104;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5327;END=52785269;EUR_AF=0.325;MC=UW_VH_3135,EM_DL_DEL51405,UW_VH_21074,YL_CN_ASW_427,UW_VH_6984,UW_VH_18672,UW_VH_4472,SI_BD_1762,UW_VH_11813;NS=2504;SAS_AF=0.3783;SVTYPE=DEL	GT	1|1
2	54565490	UW_VH_25165	T	<CN0>	100	PASS	AC=2866;AF=0.572284;AFR_AF=0.6271;AMR_AF=0.6484;AN=5008;CIEND=0,367;CIPOS=-301,0;CS=DEL_union;EAS_AF=0.3849;END=54567478;EUR_AF=0.7465;MC=EM_DL_DEL51576,UW_VH_2716,UW_VH_17090,UW_VH_13896,UW_VH_3431,UW_VH_19272,UW_VH_1969,SI_BD_1782,YL_CN_GBR_402,YL_CN_GIH_301,UW_VH_22040,UW_VH_5162,UW_VH_21075,UW_VH_11631;NS=2504;SAS_AF=0.4581;SVTYPE=DEL	GT	0|1
2	56652306	UW_VH_1696	G	<CN0>	100	PASS	AC=2059;AF=0.411142;AFR_AF=0.2292;AMR_AF=0.4049;AN=5008;CIEND=0,534;CIPOS=-404,0;CS=DEL_union;EAS_AF=0.5942;END=56655874;EUR_AF=0.4334;MC=SI_BD_1799,YL_CN_YRI_519,BI_GS_DEL1_B1_P0307_614,YL_CN_GWD_545,EM_DL_DEL51767;NS=2504;SAS_AF=0.4499;SVTYPE=DEL	GT	1|1
2	56850110	DEL_pindel_3606	ACTAAGAAAATATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTTTCGCCCAAGCTGGACTGCAGTGGCGCTATCCCGGCTCACTGCAAGCTCCGCCTCTTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=2182;AF=0.435703;AFR_AF=0.5197;AMR_AF=0.3732;AN=5008;CS=DEL_pindel;EAS_AF=0.4722;END=56850433;EUR_AF=0.4026;MEINFO=AluYb,2,281,-;NS=2504;SAS_AF=0.363;SITEPOST=0.9951;SVTYPE=DEL_ALU	GT	1|0
2	57247962	ALU_umary_ALU_1221	T	<INS:ME:ALU>	.	.	AC=1535;AF=0.30651;AFR_AF=0.2814;AMR_AF=0.1844;AN=5008;CS=ALU_umary;EAS_AF=0.4315;EUR_AF=0.3091;MEINFO=AluYb8,1,280,-;NS=2504;SAS_AF=0.2955;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GTATGTCTTCTTTT	GT	0|1
2	59644944	DEL_pindel_3661	ATATATATATATATATATATATATATATATATATATATATATATACACTTC	A	.	PASS	AC=2671;AF=0.533347;AFR_AF=0.382;AMR_AF=0.6484;AN=5008;CS=DEL_pindel;EAS_AF=0.6359;END=59644994;EUR_AF=0.5398;NS=2504;SAS_AF=0.544;SITEPOST=0.9966;SVTYPE=DEL	GT	1|1
2	59874277	ALU_umary_ALU_1237	G	<INS:ME:ALU>	.	.	AC=587;AF=0.117212;AFR_AF=0.0408;AMR_AF=0.147;AN=5008;CS=ALU_umary;EAS_AF=0.1091;EUR_AF=0.16;MEINFO=AluUndef,71,276,+;NS=2504;SAS_AF=0.1636;SITEPOST=1;SVLEN=205;SVTYPE=ALU;TSD=AACAGAAAAATAACTACAAGGG	GT	1|0
2	62457099	DEL_pindel_3711	TTATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTGTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTGGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=864;AF=0.172524;AFR_AF=0.1316;AMR_AF=0.2363;AN=5008;CS=DEL_pindel;EAS_AF=0.1925;END=62457426;EUR_AF=0.1252;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2106;SITEPOST=0.9989;SVTYPE=DEL_ALU	GT	0|1
2	62501912	ALU_umary_ALU_1246	T	<INS:ME:ALU>	.	.	AC=1834;AF=0.366214;AFR_AF=0.3003;AMR_AF=0.3718;AN=5008;CS=ALU_umary;EAS_AF=0.4524;EUR_AF=0.3082;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4223;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGCTATACATTCTT	GT	1|1
2	64694288	BI_GS_DEL1_B1_P0315_676	T	<CN0>	100	PASS	AC=4;AF=0.00079872;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=64705094;EUR_AF=0.004;MC=YL_CN_FIN_413,EM_DL_DEL51975,SI_BD_1855;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	1|0
2	65807507	DEL_pindel_3759	TCATGTTACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3458;AF=0.690495;AFR_AF=0.7368;AMR_AF=0.5836;AN=5008;CS=DEL_pindel;EAS_AF=0.6567;END=65807817;EUR_AF=0.7127;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.7157;SITEPOST=0.9949;SVTYPE=DEL_ALU	GT	1|0
2	66505568	BI_GS_DEL1_B1_P0317_504	A	<CN0>	100	PASS	AC=860;AF=0.171725;AFR_AF=0.0711;AMR_AF=0.147;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.2302;END=66507543;EUR_AF=0.1859;MC=UW_VH_4845,UW_VH_1971,UW_VH_6004,UW_VH_1697,UW_VH_14367,YL_CN_GBR_412,UW_VH_7321,UW_VH_25166,UW_VH_18414,EM_DL_DEL10537604,UW_VH_4725;NS=2504;SAS_AF=0.2505;SVTYPE=DEL	GT	0|1
2	66658991	ALU_umary_ALU_1261	A	<INS:ME:ALU>	.	.	AC=2213;AF=0.441893;AFR_AF=0.3555;AMR_AF=0.4049;AN=5008;CS=ALU_umary;EAS_AF=0.3333;EUR_AF=0.5388;MEINFO=AluUndef,1,279,+;NS=2504;SAS_AF=0.5971;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AGAAAACAAAAGAA	GT	1|1
2	70125033	BI_GS_DEL1_B3_P0321_5	T	<CN0>	100	PASS	AC=2885;AF=0.576078;AFR_AF=0.823;AMR_AF=0.4006;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5417;END=70125561;EUR_AF=0.4423;MC=DEL_pindel_3833,UW_VH_186;NS=2504;SAS_AF=0.5399;SVTYPE=DEL	GT	1|1
2	70797718	ALU_umary_ALU_1287	T	<INS:ME:ALU>	.	.	AC=1062;AF=0.212061;AFR_AF=0.053;AMR_AF=0.2594;AN=5008;CS=ALU_umary;EAS_AF=0.2629;EUR_AF=0.2992;MEINFO=AluYa5,1,276,-;NS=2504;SAS_AF=0.2515;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=CCCTCCTTCTAATTCTATT	GT	1|0
2	72244731	ALU_umary_ALU_1290	T	<INS:ME:ALU>	.	.	AC=1273;AF=0.254193;AFR_AF=0.2504;AMR_AF=0.2896;AN=5008;CS=ALU_umary;EAS_AF=0.1577;EUR_AF=0.2744;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.3129;SITEPOST=0.919;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0|1
2	72440495	CINV_delly_INV00057450	G	<INV>	.	PASS	AC=407;AF=0.08127;AFR_AF=0.0189;AMR_AF=0.1729;AN=5008;CIEND=-136,136;CIPOS=-136,136;CS=CINV_delly;EAS_AF=0.0208;END=72441373;EUR_AF=0.1491;IMPRECISE;NS=2504;SAS_AF=0.093;SVTYPE=INV	GT	0|1
2	75387903	ALU_umary_ALU_1307	A	<INS:ME:ALU>	.	.	AC=1939;AF=0.387181;AFR_AF=0.2973;AMR_AF=0.4409;AN=5008;CS=ALU_umary;EAS_AF=0.38;EUR_AF=0.4493;MEINFO=AluYc1,3,278,+;NS=2504;SAS_AF=0.4141;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AAGACATAACCGA	GT	1|0
2	76257717	ALU_umary_ALU_1312	T	<INS:ME:ALU>	.	.	AC=149;AF=0.0297524;AFR_AF=0.0015;AMR_AF=0.0303;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0875;MEINFO=AluUndef,74,281,-;NS=2504;SAS_AF=0.0378;SITEPOST=1;SVLEN=207;SVTYPE=ALU;TSD=TTTCACCTATTTGCATATTCTTTTTTT	GT	1|0
2	79057647	DEL_pindel_4049	TATGAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2091;AF=0.417532;AFR_AF=0.4887;AMR_AF=0.4063;AN=5008;CS=DEL_pindel;EAS_AF=0.3591;END=79057983;EUR_AF=0.3867;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4213;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	0|1
2	82340445	DEL_pindel_4092	ATATTTTAACAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC	A	.	PASS	AC=3037;AF=0.60643;AFR_AF=0.6029;AMR_AF=0.634;AN=5008;CS=DEL_pindel;EAS_AF=0.6448;END=82340765;EUR_AF=0.6342;MEINFO=AluYa4_4,12,281,-;NS=2504;SAS_AF=0.5235;SITEPOST=0.9885;SVTYPE=DEL_ALU	GT	1|1
2	84590146	ALU_umary_ALU_1350	C	<INS:ME:ALU>	.	.	AC=745;AF=0.148762;AFR_AF=0.1082;AMR_AF=0.2061;AN=5008;CS=ALU_umary;EAS_AF=0.0665;EUR_AF=0.2475;MEINFO=AluYa5,1,280,-;NS=2504;SAS_AF=0.1462;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CAATAGACCCATCTC	GT	1|1
2	84728755	ALU_umary_ALU_1354	A	<INS:ME:ALU>	.	.	AC=3516;AF=0.702077;AFR_AF=0.6868;AMR_AF=0.7075;AN=5008;CS=ALU_umary;EAS_AF=0.7341;EUR_AF=0.6928;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.6953;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGTTTGGTAAA	GT	1|0
2	84758440	DEL_pindel_4137	TTTATTTTCCTTTTTTTTTTTATTTTTTATTTTTTTTTATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCC	T	.	PASS	AC=3987;AF=0.796126;AFR_AF=0.7262;AMR_AF=0.8242;AN=5008;CS=DEL_pindel;EAS_AF=0.8194;END=84758733;EUR_AF=0.8201;MEINFO=AluYc1,41,281,-;NS=2504;SAS_AF=0.8221;SITEPOST=0.98055;SVTYPE=DEL_ALU	GT	1|1
2	88320968	DEL_pindel_4162	TAAGGAGATCGAGACCATCCCGGCTATAGCGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4584;AF=0.915335;AFR_AF=0.7837;AMR_AF=0.9409;AN=5008;CS=DEL_pindel;EAS_AF=0.995;END=88321215;EUR_AF=0.9374;MEINFO=AluY,69,281,+;NS=2504;SAS_AF=0.9703;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|1
2	89132270	UW_VH_20227	C	<CN0>	100	PASS	AC=1220;AF=0.24361;AFR_AF=0.2549;AMR_AF=0.1931;AN=5008;CIEND=0,68;CIPOS=-56,0;CS=DEL_union;EAS_AF=0.3065;END=89155860;EUR_AF=0.3419;MC=YL_CN_YRI_569,UW_VH_20057,YL_CN_CLM_370,UW_VH_25211,UW_VH_14563;NS=2504;SAS_AF=0.0982;SVTYPE=DEL	GT	1|0
2	91865750	DUP_gs_CNV_2_91865750_91925129	C	<CN2>,<CN3>	.	PASS	AC=4963,4;AF=0.991014,0.00079872;AFR_AF=0.9826,0.0008;AMR_AF=0.9986,0;AN=5008;CS=DUP_gs;EAS_AF=0.9881,0;END=91925129;EUR_AF=0.995,0.001;NS=2504;SAS_AF=0.9959,0.002;SITEPOST=1;SVTYPE=CNV	GT	1|1
2	97854287	UW_VH_3901	A	<CN0>	100	PASS	AC=1794;AF=0.358227;AFR_AF=0.0968;AMR_AF=0.4914;AN=5008;CIEND=0,494;CIPOS=-298,0;CS=DEL_union;EAS_AF=0.2391;END=97856138;EUR_AF=0.7922;MC=YL_CN_CEU_603,SI_BD_2028,YL_CN_PUR_565;NS=2504;SAS_AF=0.2935;SVTYPE=DEL	GT	1|1
2	98136216	DUP_gs_CNV_2_98136216_98156567	A	<CN0>,<CN2>	.	PASS	AC=1913,2;AF=0.381989,0.00039936;AFR_AF=0.3411,0.0008;AMR_AF=0.4366,0;AN=5008;CS=DUP_gs;EAS_AF=0.3036,0;END=98156567;EUR_AF=0.6491,0.001;NS=2504;SAS_AF=0.2045,0;SITEPOST=1;SVTYPE=CNV	GT	0|1
2	99752964	DEL_pindel_4252	CAAAAAAAGTATTTCTGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2338;AF=0.466853;AFR_AF=0.3351;AMR_AF=0.4957;AN=5008;CS=DEL_pindel;EAS_AF=0.5873;END=99753300;EUR_AF=0.494;MEINFO=AluYa4b,2,281,+;NS=2504;SAS_AF=0.4724;SITEPOST=0.9949;SVTYPE=DEL_ALU	GT	0|1
2	100103689	SI_BD_2034	A	<CN0>	100	PASS	AC=2007;AF=0.400759;AFR_AF=0.4002;AMR_AF=0.6412;AN=5008;CIEND=-111,338;CIPOS=-338,97;CS=DEL_union;EAS_AF=0.3085;END=100105021;EUR_AF=0.4473;MC=YL_CN_MXL_394,YL_CN_JPT_522,YL_CN_CEU_613,YL_CN_IBS_409,UW_VH_2652,YL_CN_ACB_546,YL_CN_GWD_656,UW_VH_4938,YL_CN_PEL_471,EM_DL_DEL10549314,YL_CN_CLM_412;NS=2504;SAS_AF=0.2781;SVTYPE=DEL	GT	1|0
2	101975203	DEL_pindel_4291	TGAGAACTGAGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA	T	.	PASS	AC=2813;AF=0.561701;AFR_AF=0.3714;AMR_AF=0.5562;AN=5008;CS=DEL_pindel;EAS_AF=0.629;END=101975536;EUR_AF=0.671;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6411;SITEPOST=0.9886;SVTYPE=DEL_ALU	GT	1|0
2	106452585	ALU_umary_ALU_1406	T	<INS:ME:ALU>	.	.	AC=1241;AF=0.247804;AFR_AF=0.4463;AMR_AF=0.2478;AN=5008;CS=ALU_umary;EAS_AF=0.1885;EUR_AF=0.1849;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0.1053;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=GGATTTCCTTTTCTTTGTT	GT	1|0
2	106694799	YL_CN_YRI_643	A	<CN0>	100	PASS	AC=2280;AF=0.455272;AFR_AF=0.4236;AMR_AF=0.3372;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4821;END=106696035;EUR_AF=0.4414;NS=2504;SAS_AF=0.5685;SVTYPE=DEL	GT	0|1
2	106695055	BI_GS_DEL1_B5_P0357_929	A	<CN0>	100	PASS	AC=2280;AF=0.455272;AFR_AF=0.4236;AMR_AF=0.3372;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.4821;END=106695893;EUR_AF=0.4414;MC=SI_BD_2065,UW_VH_4964,UW_VH_11654,UW_VH_8771,UW_VH_18973,EM_DL_DEL10551696,UW_VH_197,UW_VH_7782;NS=2504;SAS_AF=0.5685;SVTYPE=DEL	GT	0|1
2	106695492	BI_GS_DEL1_B2_P0357_583	A	<CN0>	100	PASS	AC=2278;AF=0.454872;AFR_AF=0.4228;AMR_AF=0.3386;AN=5008;CIEND=-21,22;CIPOS=-21,22;CS=DEL_union;EAS_AF=0.4821;END=106695752;EUR_AF=0.4404;NS=2504;SAS_AF=0.5675;SVTYPE=DEL	GT	0|1
2	106880209	DUP_gs_CNV_2_106880209_106885796	T	<CN0>,<CN2>	.	PASS	AC=1761,1;AF=0.351637,0.00019968;AFR_AF=0.3419,0;AMR_AF=0.379,0;AN=5008;CS=DUP_gs;EAS_AF=0.4147,0;END=106885796;EUR_AF=0.3151,0;MC=SI_BD_2067,BI_GS_DEL1_B1_P0357_862,UW_VH_22064,UW_VH_5239,EM_DL_DEL53837,UW_VH_16569,YL_CN_STU_476,UW_VH_198,UW_VH_6517;NS=2504;SAS_AF=0.318,0.001;SITEPOST=1;SVTYPE=CNV	GT	0|1
2	106930527	DEL_pindel_4367	TTTTATATATATATATATGTATGTATATATATATATATGTATGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATA	T	.	PASS	AC=1892;AF=0.377796;AFR_AF=0.267;AMR_AF=0.464;AN=5008;CS=DEL_pindel;EAS_AF=0.3006;END=106930629;EUR_AF=0.4483;NS=2504;SAS_AF=0.4734;SITEPOST=0.9885;SVTYPE=DEL	GT	1|0
2	111576391	BI_GS_DEL1_B5_P0362_229	A	<CN0>	100	PASS	AC=1637;AF=0.326877;AFR_AF=0.09;AMR_AF=0.3213;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.3958;END=111576633;EUR_AF=0.4573;MC=DEL_pindel_4403;NS=2504;SAS_AF=0.4458;SVTYPE=DEL	GT	1|1
2	112447436	ALU_umary_ALU_1433	C	<INS:ME:ALU>	.	.	AC=2108;AF=0.420927;AFR_AF=0.4213;AMR_AF=0.4107;AN=5008;CS=ALU_umary;EAS_AF=0.372;EUR_AF=0.4841;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4131;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CCCAAATGATTTTC	GT	1|1
2	112453948	ALU_umary_ALU_1434	T	<INS:ME:ALU>	.	.	AC=416;AF=0.0830671;AFR_AF=0.0779;AMR_AF=0.1268;AN=5008;CS=ALU_umary;EAS_AF=0.0952;EUR_AF=0.0746;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.0552;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GAGAGATTTATTTT	GT	0|1
2	114106446	ALU_umary_ALU_1441	A	<INS:ME:ALU>	.	.	AC=1248;AF=0.249201;AFR_AF=0.087;AMR_AF=0.232;AN=5008;CS=ALU_umary;EAS_AF=0.381;EUR_AF=0.2614;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.3323;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAATCAGAAAA	GT	1|1
2	114151313	SI_BD_2100	A	<CN0>	100	PASS	AC=3640;AF=0.726837;AFR_AF=0.8056;AMR_AF=0.7046;AN=5008;CIEND=-50,296;CIPOS=-296,50;CS=DEL_union;EAS_AF=0.6577;END=114153614;EUR_AF=0.7445;NS=2504;SAS_AF=0.6892;SVTYPE=DEL	GT	1|0
2	115628104	BI_GS_DEL1_B3_P0366_34	C	<CN0>	100	PASS	AC=1550;AF=0.309505;AFR_AF=0.1437;AMR_AF=0.389;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5873;END=115628838;EUR_AF=0.2744;MC=SI_BD_2112,DEL_pindel_4458;NS=2504;SAS_AF=0.227;SVTYPE=DEL	GT	1|0
2	116662058	BI_GS_DEL1_B4_P0367_141	A	<CN0>	100	PASS	AC=528;AF=0.105431;AFR_AF=0.1074;AMR_AF=0.0879;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1052;END=116662652;EUR_AF=0.1074;MC=UW_VH_2292;NS=2504;SAS_AF=0.1135;SVTYPE=DEL	GT	1|0
2	117334924	DEL_pindel_4498	TAAAACCAGGTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATGACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGACGTAGTGGCGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=612;AF=0.122204;AFR_AF=0.0204;AMR_AF=0.0994;AN=5008;CS=DEL_pindel;EAS_AF=0.1171;END=117335240;EUR_AF=0.174;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.228;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|0
2	117893050	DEL_pindel_4509	TAAGAAATACATCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAAAATAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3573;AF=0.713458;AFR_AF=0.6906;AMR_AF=0.755;AN=5008;CS=DEL_pindel;EAS_AF=0.7054;END=117893389;EUR_AF=0.675;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7628;SITEPOST=0.9881;SVTYPE=DEL_ALU	GT	0|1
2	118906129	DEL_pindel_4536	TAAAAAGGCTTCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2356;AF=0.470447;AFR_AF=0.6036;AMR_AF=0.402;AN=5008;CS=DEL_pindel;EAS_AF=0.3819;END=118906281;EUR_AF=0.4901;MEINFO=AluYa,169,281,+;NS=2504;SAS_AF=0.41;SITEPOST=0.9987;SVTYPE=DEL_ALU	GT	1|1
2	121797802	BI_GS_DEL1_B2_P0372_743	T	<CN0>	100	PASS	AC=2502;AF=0.499601;AFR_AF=0.3245;AMR_AF=0.5793;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5089;END=121798397;EUR_AF=0.6909;MC=DEL_pindel_4580,UW_VH_201;NS=2504;SAS_AF=0.4734;SVTYPE=DEL	GT	1|0
2	122056855	EM_DL_DEL10557193	A	<CN0>	100	PASS	AC=819;AF=0.163538;AFR_AF=0.4228;AMR_AF=0.0778;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.002;END=122058006;EUR_AF=0.0736;MC=SI_BD_2149,BI_GS_DEL1_B4_P0373_16;NS=2504;SAS_AF=0.1329;SVTYPE=DEL	GT	0|1
2	122623755	DEL_pindel_4605	AGCATAAGCATTGTGTTTTCTCGACCAGAGAAATCTATGTTAAAGGCTTGCTTCT	A	.	PASS	AC=2038;AF=0.406949;AFR_AF=0.2489;AMR_AF=0.3991;AN=5008;CS=DEL_pindel;EAS_AF=0.2768;END=122623809;EUR_AF=0.5944;NS=2504;SAS_AF=0.5675;SITEPOST=0.9998;SVTYPE=DEL	GT	1|1
2	123330661	ALU_umary_ALU_1484	A	<INS:ME:ALU>	.	.	AC=2231;AF=0.445487;AFR_AF=0.4834;AMR_AF=0.4006;AN=5008;CS=ALU_umary;EAS_AF=0.4921;EUR_AF=0.502;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.32;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAAAATCCACTGA	GT	0|1
2	123364885	UW_VH_202	A	<CN0>	100	PASS	AC=2077;AF=0.414736;AFR_AF=0.1256;AMR_AF=0.4092;AN=5008;CIEND=0,483;CIPOS=-548,0;CS=DEL_union;EAS_AF=0.6389;END=123365367;EUR_AF=0.6203;MC=BI_GS_DEL1_B3_P0374_13,SI_BD_2157;NS=2504;SAS_AF=0.3671;SVTYPE=DEL	GT	0|1
2	123476599	CINV_delly_INV00060053	G	<INV>	.	PASS	AC=834;AF=0.166534;AFR_AF=0.0598;AMR_AF=0.1124;AN=5008;CIEND=-56,56;CIPOS=-56,56;CS=CINV_delly;EAS_AF=0.3562;END=123482503;EUR_AF=0.1173;IMPRECISE;NS=2504;SAS_AF=0.2045;SVTYPE=INV	GT	1|0
2	123477289	BI_GS_CNV_2_123477289_123482545	A	<CN0>	100	PASS	AC=832;AF=0.166134;AFR_AF=0.059;AMR_AF=0.1124;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.3552;END=123482545;EUR_AF=0.1173;NS=2504;SAS_AF=0.2045;SVTYPE=DEL	GT	1|0
2	124054928	ALU_umary_ALU_1489	T	<INS:ME:ALU>	.	.	AC=812;AF=0.162141;AFR_AF=0.1369;AMR_AF=0.2161;AN=5008;CS=ALU_umary;EAS_AF=0.0784;EUR_AF=0.2068;MEINFO=AluUndef,1,259,-;NS=2504;SAS_AF=0.1984;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=GAGCTTTATTTTT	GT	1|0
2	126368481	BI_GS_DEL1_B3_P0377_16	T	<CN0>	100	PASS	AC=255;AF=0.0509185;AFR_AF=0.0053;AMR_AF=0.0663;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.001;END=126370218;EUR_AF=0.1302;MC=UW_VH_9397,EM_DL_DEL10558934,SI_BD_2174,UW_VH_1705;NS=2504;SAS_AF=0.0716;SVTYPE=DEL	GT	0|1
2	126443247	EM_DL_DEL54293	G	<CN0>	100	PASS	AC=3691;AF=0.737021;AFR_AF=0.6241;AMR_AF=0.7695;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.8631;END=126451831;EUR_AF=0.6412;MC=BI_GS_DEL1_B1_P0377_340,YL_CN_MXL_432,UW_VH_10951,UW_VH_2653,UW_VH_22041,UW_VH_18622,SI_BD_2176;NS=2504;SAS_AF=0.8354;SVTYPE=DEL	GT	1|0
2	126641642	ALU_umary_ALU_1502	T	<INS:ME:ALU>	.	.	AC=220;AF=0.0439297;AFR_AF=0.003;AMR_AF=0.0562;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.1362;MEINFO=AluYb8,8,277,+;NS=2504;SAS_AF=0.0389;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AAGAAACTATT	GT	0|1
2	127674757	UW_VH_5962	T	<CN0>	100	PASS	AC=3385;AF=0.675919;AFR_AF=0.2799;AMR_AF=0.8271;AN=5008;CIEND=0,460;CIPOS=-434,0;CS=DEL_union;EAS_AF=0.8651;END=127677270;EUR_AF=0.835;MC=EM_DL_DEL54330,YL_CN_LWK_480,YL_CN_FIN_514,SI_BD_2187;NS=2504;SAS_AF=0.7454;SVTYPE=DEL	GT	1|0
2	131423474	SI_BD_2228	G	<CN0>	100	PASS	AC=315;AF=0.0628994;AFR_AF=0.053;AMR_AF=0.0706;AN=5008;CIEND=-50,51;CIPOS=-51,50;CS=DEL_union;EAS_AF=0.0069;END=131426399;EUR_AF=0.1451;NS=2504;SAS_AF=0.044;SVTYPE=DEL	GT	1|1
2	131424936	YL_CN_GBR_529	G	<CN0>	100	PASS	AC=327;AF=0.0652955;AFR_AF=0.0605;AMR_AF=0.072;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0069;END=131428361;EUR_AF=0.1461;MC=YL_CN_FIN_525;NS=2504;SAS_AF=0.044;SVTYPE=DEL	GT	1|1
2	131463320	BI_GS_DEL1_B4_P0382_37	T	<CN0>	100	PASS	AC=17;AF=0.00339457;AFR_AF=0.0015;AMR_AF=0.0043;AN=5008;CIEND=-56,56;CIPOS=-56,56;CS=DEL_union;EAS_AF=0;END=131475704;EUR_AF=0.0109;MC=YL_CN_YRI_713;NS=2504;SAS_AF=0.001;SVTYPE=DEL	GT	1|0
2	132335225	DEL_pindel_4748	AGCGCTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGT	A	.	PASS	AC=3540;AF=0.706869;AFR_AF=0.6218;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.7788;END=132335331;EUR_AF=0.7147;MEINFO=AluYb,213,281,-;NS=2504;SAS_AF=0.7178;SITEPOST=0.9008;SVTYPE=DEL_ALU	GT	1|1
2	139380788	ALU_umary_ALU_1564	G	<INS:ME:ALU>	.	.	AC=584;AF=0.116613;AFR_AF=0.0182;AMR_AF=0.1369;AN=5008;CS=ALU_umary;EAS_AF=0.1429;EUR_AF=0.1799;MEINFO=AluUndef,12,281,+;NS=2504;SAS_AF=0.1431;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AACAACAGCTCTG	GT	0|1
2	143434605	DEL_pindel_4970	TCAAAGCTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=2870;AF=0.573083;AFR_AF=0.7103;AMR_AF=0.5115;AN=5008;CS=DEL_pindel;EAS_AF=0.5466;END=143434943;EUR_AF=0.4324;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.6033;SITEPOST=0.9913;SVTYPE=DEL_ALU	GT	0|1
2	144010793	L1_umary_LINE1_410	A	<INS:ME:LINE1>	.	.	AC=751;AF=0.14996;AFR_AF=0.0855;AMR_AF=0.1614;AN=5008;CS=L1_umary;EAS_AF=0.1409;EUR_AF=0.1879;MEINFO=LINE1,1,5969,+;NS=2504;SAS_AF=0.1994;SITEPOST=1;SVLEN=5968;SVTYPE=LINE1;TSD=AAAAAGTTTGATGGA	GT	1|0
2	145346767	ALU_umary_ALU_1610	A	<INS:ME:ALU>	.	.	AC=1648;AF=0.329073;AFR_AF=0.3805;AMR_AF=0.3127;AN=5008;CS=ALU_umary;EAS_AF=0.3393;EUR_AF=0.3141;MEINFO=AluUndef,2,276,+;NS=2504;SAS_AF=0.2761;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AATAAATATTTACAA	GT	1|0
2	146842402	DEL_pindel_5051	CGATTCCTCAAGGATCTAGAACCAGAAAAACCATTTGACTCAGCAATCCCATTTCTGGGTATGTACCCAAAGGATTATAAATCATGCTACTATAAAGACACATGAATATGTATGTTTATTGTGGCACTATTCACAACAGCAAAGACTT	C	.	PASS	AC=1801;AF=0.359625;AFR_AF=0.0968;AMR_AF=0.3847;AN=5008;CS=DEL_pindel;EAS_AF=0.626;END=146842549;EUR_AF=0.4245;NS=2504;SAS_AF=0.3558;SITEPOST=0.9999;SVTYPE=DEL	GT	1|1
2	146862622	BI_GS_DEL1_B1_P0397_730	A	<CN0>	100	PASS	AC=1822;AF=0.363818;AFR_AF=0.0862;AMR_AF=0.3948;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6488;END=146876866;EUR_AF=0.4245;MC=EM_DL_DEL54907,YL_CN_CEU_683,UW_VH_7319;NS=2504;SAS_AF=0.3609;SVTYPE=DEL	GT	1|1
2	146868295	UW_VH_12564	T	<CN0>	100	PASS	AC=1823;AF=0.364018;AFR_AF=0.0862;AMR_AF=0.3963;AN=5008;CIEND=0,87;CIPOS=-74,0;CS=DEL_union;EAS_AF=0.6488;END=146876318;EUR_AF=0.4245;MC=BI_GS_DEL1_B2_P0397_573;NS=2504;SAS_AF=0.3609;SVTYPE=DEL	GT	1|1
2	147020933	L1_umary_LINE1_411	T	<INS:ME:LINE1>	.	.	AC=3464;AF=0.691693;AFR_AF=0.3835;AMR_AF=0.7579;AN=5008;CS=L1_umary;EAS_AF=0.8373;EUR_AF=0.8082;MEINFO=LINE1,4568,6016,+;NS=2504;SAS_AF=0.7914;SITEPOST=1;SVLEN=1448;SVTYPE=LINE1;TSD=AGAAATACT	GT	1|0
2	148650072	ALU_umary_ALU_1623	T	<INS:ME:ALU>	.	.	AC=896;AF=0.178914;AFR_AF=0.1157;AMR_AF=0.2219;AN=5008;CS=ALU_umary;EAS_AF=0.2669;EUR_AF=0.1839;MEINFO=AluYb9,17,278,-;NS=2504;SAS_AF=0.138;SITEPOST=1;SVLEN=261;SVTYPE=ALU;TSD=AACTTTTTT	GT	0|1
2	150759300	DEL_pindel_5133	CAAACAAGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2602;AF=0.519569;AFR_AF=0.3684;AMR_AF=0.5605;AN=5008;CS=DEL_pindel;EAS_AF=0.6677;END=150759621;EUR_AF=0.5388;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5225;SITEPOST=0.9917;SVTYPE=DEL_ALU	GT	1|0
2	151903083	DEL_pindel_5163	TAAACAATTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCACCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4565;AF=0.911542;AFR_AF=0.733;AMR_AF=0.9553;AN=5008;CS=DEL_pindel;EAS_AF=0.9762;END=151903359;EUR_AF=0.9881;MEINFO=AluY,39,281,+;NS=2504;SAS_AF=0.9765;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|1
2	152041204	DEL_pindel_5164	TTAAGCATAATATTGGCAAAGCATGATTTTTTCCTTGACAAGGATGAATTGCTCAATATAAACCCTGGGAAGAACTAATATGAACAAAGAAAAAAAATAAAGAGAATCCAGAATAAGGTAGTTTCTGAATATCAGATATTACAGAGCAAAGGAAAAATACCATAAAATATTTCGTGCATGATAAAACCTTGCTTATTCAAATTTTTGGTACATAAGAATGGCACATATACCGCAAAATAGAAGGTGATTAAGAAATAAGTTATTTCATTTTAGAGGGTAGTCACACATA	T	.	PASS	AC=1378;AF=0.27516;AFR_AF=0.0461;AMR_AF=0.4193;AN=5008;CS=DEL_pindel;EAS_AF=0.3581;END=152041492;EUR_AF=0.3976;NS=2504;SAS_AF=0.271;SITEPOST=0.998;SVTYPE=DEL	GT	1|1
2	153153401	DEL_pindel_5178	TATGTTTCTCTGTTGAAAGAAATGCTATGCCTTTGTGAAAATTGCCATTCTGTAAAAGTACTACTGAAGAATAGGACTCTGCTAAGGA	T	.	PASS	AC=2265;AF=0.452276;AFR_AF=0.2716;AMR_AF=0.3602;AN=5008;CS=DEL_pindel;EAS_AF=0.8433;END=153153488;EUR_AF=0.2942;NS=2504;SAS_AF=0.5215;SITEPOST=0.9996;SVTYPE=DEL	GT	1|0
2	154064575	DEL_pindel_5203	ATTTTTTTTTTTTTTTTTTTAAAAGGACATGAGGATGATTTATTTGGCAGTCAGATCTTAAGAGGGCAGCAGAACTAGCAAATGGCCAACCCTGAGCCCAAATG	A	.	PASS	AC=3062;AF=0.611422;AFR_AF=0.7784;AMR_AF=0.5893;AN=5008;CS=DEL_pindel;EAS_AF=0.3462;END=154064678;EUR_AF=0.7276;NS=2504;SAS_AF=0.5552;SITEPOST=0.986;SVTYPE=DEL	GT	0|1
2	154160685	ALU_umary_ALU_1647	T	<INS:ME:ALU>	.	.	AC=979;AF=0.195487;AFR_AF=0.2496;AMR_AF=0.1556;AN=5008;CS=ALU_umary;EAS_AF=0.1171;EUR_AF=0.2435;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.182;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CACTGTTCTGTTTTT	GT	0|1
2	154494940	BI_GS_DEL1_B4_P0405_123	C	<CN0>	100	PASS	AC=3532;AF=0.705272;AFR_AF=0.4992;AMR_AF=0.7334;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9315;END=154495150;EUR_AF=0.7207;NS=2504;SAS_AF=0.7147;SVTYPE=DEL	GT	1|1
2	156750284	DEL_pindel_5254	TCTAACAAAGTTAGTGGCTTTGTGGCTAACTTTGTAACTAACTAACAAAGTTAGTGGCTAACAAGTGTTAGTGGCTTTCACTAACA	T	.	PASS	AC=1013;AF=0.202276;AFR_AF=0.3026;AMR_AF=0.1383;AN=5008;CS=DEL_pindel;EAS_AF=0.2163;END=156750369;EUR_AF=0.1491;NS=2504;SAS_AF=0.1524;SITEPOST=0.9995;SVTYPE=DEL	GT	1|0
2	156833715	UW_VH_1709	C	<CN0>	100	PASS	AC=81;AF=0.0161741;AFR_AF=0.0015;AMR_AF=0.0216;AN=5008;CIEND=0,349;CIPOS=-339,0;CS=DEL_union;EAS_AF=0;END=156835494;EUR_AF=0.0527;MC=BI_GS_DEL1_B3_P0407_32,EM_DL_DEL10570970;NS=2504;SAS_AF=0.0112;SVTYPE=DEL	GT	0|1
2	158433337	DEL_pindel_5271	TTGAAATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1864;AF=0.372204;AFR_AF=0.4758;AMR_AF=0.3991;AN=5008;CS=DEL_pindel;EAS_AF=0.2817;END=158433666;EUR_AF=0.4026;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2751;SITEPOST=0.9988;SVTYPE=DEL_ALU	GT	0|1
2	158719085	DEL_pindel_5275	TGAAAAGGTAACTACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	.	PASS	AC=3698;AF=0.738419;AFR_AF=0.6725;AMR_AF=0.7334;AN=5008;CS=DEL_pindel;EAS_AF=0.7609;END=158719396;EUR_AF=0.7694;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7761;SITEPOST=0.9381;SVTYPE=DEL_ALU	GT	1|1
2	159285147	ALU_umary_ALU_1679	A	<INS:ME:ALU>	.	.	AC=510;AF=0.101837;AFR_AF=0.112;AMR_AF=0.1037;AN=5008;CS=ALU_umary;EAS_AF=0.0218;EUR_AF=0.164;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.1053;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAAGTCAGGAAACA	GT	1|0
2	159661933	UW_VH_2194	C	<CN0>	100	PASS	AC=336;AF=0.0670926;AFR_AF=0.0492;AMR_AF=0.1023;AN=5008;CIEND=0,344;CIPOS=-320,0;CS=DEL_union;EAS_AF=0;END=159662894;EUR_AF=0.1571;MC=BI_GS_DEL1_B4_P0410_166,EM_DL_DEL10572094;NS=2504;SAS_AF=0.0429;SVTYPE=DEL	GT	1|0
2	159958908	YL_CN_MXL_460	C	<CN0>	100	PASS	AC=2315;AF=0.46226;AFR_AF=0.2663;AMR_AF=0.5519;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.3621;END=159961502;EUR_AF=0.663;MC=EM_DL_DEL55175,UW_VH_23902;NS=2504;SAS_AF=0.5603;SVTYPE=DEL	GT	1|1
2	160855851	DEL_pindel_5321	TTACGTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTCTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC	T	.	PASS	AC=3564;AF=0.711661;AFR_AF=0.7791;AMR_AF=0.7305;AN=5008;CS=DEL_pindel;EAS_AF=0.7312;END=160856174;EUR_AF=0.7137;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5849;SITEPOST=0.98995;SVTYPE=DEL_ALU	GT	1|1
2	161795600	DEL_pindel_5339	AGAAGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=4708;AF=0.940096;AFR_AF=0.9349;AMR_AF=0.9524;AN=5008;CS=DEL_pindel;EAS_AF=0.9286;END=161795924;EUR_AF=0.9463;MEINFO=AluYa4b,1,281,-;NS=2504;SAS_AF=0.9438;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|1
2	161952337	ALU_umary_ALU_1695	C	<INS:ME:ALU>	.	.	AC=2556;AF=0.510383;AFR_AF=0.5197;AMR_AF=0.5014;AN=5008;CS=ALU_umary;EAS_AF=0.5198;EUR_AF=0.5159;MEINFO=AluUndef,2,211,-;NS=2504;SAS_AF=0.4888;SITEPOST=1;SVLEN=209;SVTYPE=ALU;TSD=AAAAAAAAAAAAAAAATAGGC	GT	1|0
2	162332269	BI_GS_DEL1_B1_P0413_257	C	<CN0>	100	PASS	AC=3757;AF=0.7502;AFR_AF=0.5484;AMR_AF=0.8501;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8413;END=162334045;EUR_AF=0.7972;MC=YL_CN_CHB_595,YL_CN_FIN_545,YL_CN_GIH_423,YL_CN_JPT_617,EM_DL_DEL10573389,YL_CN_PEL_527,YL_CN_CEU_699,YL_CN_ASW_601,YL_CN_GWD_787,YL_CN_STU_548,YL_CN_CDX_506,SI_BD_2368,YL_CN_MXL_462,YL_CN_BEB_464,YL_CN_ITU_560,YL_CN_PJL_608,YL_CN_LWK_530,YL_CN_TSI_520;NS=2504;SAS_AF=0.8098;SVTYPE=DEL	GT	1|1
2	163666408	DEL_pindel_5363	TCTCACCTATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCTGGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=2780;AF=0.555112;AFR_AF=0.4667;AMR_AF=0.5692;AN=5008;CS=DEL_pindel;EAS_AF=0.5288;END=163666723;EUR_AF=0.5437;MEINFO=AluY,2,281,-;NS=2504;SAS_AF=0.7035;SITEPOST=0.98975;SVTYPE=DEL_ALU	GT	1|0
2	163678631	ALU_umary_ALU_1709	T	<INS:ME:ALU>	.	.	AC=1956;AF=0.390575;AFR_AF=0.1982;AMR_AF=0.3718;AN=5008;CS=ALU_umary;EAS_AF=0.4464;EUR_AF=0.4364;MEINFO=AluYa4_1,1,281,-;NS=2504;SAS_AF=0.5593;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAATTTTACATTTT	GT	1|0
2	167545980	BI_GS_DEL1_B1_P0418_424	A	<CN0>	100	PASS	AC=2312;AF=0.461661;AFR_AF=0.1884;AMR_AF=0.6844;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5367;END=167547056;EUR_AF=0.6412;MC=SI_BD_2389;NS=2504;SAS_AF=0.411;SVTYPE=DEL	GT	1|1
2	167550210	DEL_pindel_5420	CCAGGGTGGGTGTACACCTCCGGCTATATGGGGAGTAATATCATCCTCTCCCTTCCTGGATATTAGAAACAATTTCA	C	.	PASS	AC=2219;AF=0.443091;AFR_AF=0.1929;AMR_AF=0.6225;AN=5008;CS=DEL_pindel;EAS_AF=0.5437;END=167550286;EUR_AF=0.5596;NS=2504;SAS_AF=0.4305;SITEPOST=0.92225;SVTYPE=DEL	GT	1|1
2	169395462	DEL_pindel_5443	GGAAAATATTGTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTCTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=3349;AF=0.66873;AFR_AF=0.5923;AMR_AF=0.6988;AN=5008;CS=DEL_pindel;EAS_AF=0.6885;END=169395774;EUR_AF=0.7038;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6943;SITEPOST=0.9594;SVTYPE=DEL_ALU	GT	0|1
2	169606131	DEL_pindel_5451	AGAATATGGTAGCGTGCGCTACCATGCCTAGCTAATTTTTTATTTTTTGTAGAGACGGGGTCTTGCTGTGATACCTC	A	.	PASS	AC=3406;AF=0.680112;AFR_AF=0.848;AMR_AF=0.7853;AN=5008;CS=DEL_pindel;EAS_AF=0.4921;END=169606207;EUR_AF=0.6809;NS=2504;SAS_AF=0.5716;SITEPOST=0.9999;SVTYPE=DEL	GT	1|1
2	173522171	ALU_umary_ALU_1756	T	<INS:ME:ALU>	.	.	AC=1210;AF=0.241613;AFR_AF=0.2118;AMR_AF=0.2709;AN=5008;CS=ALU_umary;EAS_AF=0.1319;EUR_AF=0.3787;MEINFO=AluUndef,172,281,-;NS=2504;SAS_AF=0.2331;SITEPOST=1;SVLEN=109;SVTYPE=ALU;TSD=TCGATACTGCTTTT	GT	1|0
2	175090625	DEL_pindel_5552	TGAAAATGAGCTTCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2582;AF=0.515575;AFR_AF=0.3805;AMR_AF=0.4352;AN=5008;CS=DEL_pindel;EAS_AF=0.7202;END=175090945;EUR_AF=0.4453;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6166;SITEPOST=0.99115;SVTYPE=DEL_ALU	GT	0|1
2	177265639	UW_VH_21077	A	<CN0>	100	PASS	AC=3367;AF=0.672324;AFR_AF=0.4917;AMR_AF=0.8674;AN=5008;CIEND=0,408;CIPOS=-475,0;CS=DEL_union;EAS_AF=0.6528;END=177272040;EUR_AF=0.828;MC=UW_VH_22300,UW_VH_11200,UW_VH_5386,UW_VH_1970,UW_VH_10973,UW_VH_3870,UW_VH_22780,UW_VH_5963,UW_VH_20495,UW_VH_2654,UW_VH_12492,SI_BD_2429,UW_VH_24782,YL_CN_ESN_630,EM_DL_DEL55532;NS=2504;SAS_AF=0.638;SVTYPE=DEL	GT	1|1
2	178287642	BI_GS_DEL1_B3_P0429_15	G	<CN0>	100	PASS	AC=3324;AF=0.663738;AFR_AF=0.5151;AMR_AF=0.7896;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6399;END=178288052;EUR_AF=0.7525;MC=UW_VH_230,SI_BD_2437;NS=2504;SAS_AF=0.7086;SVTYPE=DEL	GT	1|1
2	178351472	ALU_umary_ALU_1785	T	<INS:ME:ALU>	.	.	AC=2131;AF=0.425519;AFR_AF=0.2186;AMR_AF=0.5245;AN=5008;CS=ALU_umary;EAS_AF=0.4732;EUR_AF=0.5258;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.4826;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CTATATGTATATTTTTAT	GT	0|1
2	178648956	ALU_umary_ALU_1789	A	<INS:ME:ALU>	.	.	AC=1431;AF=0.285743;AFR_AF=0.351;AMR_AF=0.1787;AN=5008;CS=ALU_umary;EAS_AF=0.3204;EUR_AF=0.2833;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.2403;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAACAGGATGTGGTA	GT	0|1
2	181000555	L1_umary_LINE1_457	C	<INS:ME:LINE1>	.	.	AC=920;AF=0.183706;AFR_AF=0.1717;AMR_AF=0.2795;AN=5008;CS=L1_umary;EAS_AF=0.1448;EUR_AF=0.169;MEINFO=LINE1,4479,5965,+;NS=2504;SAS_AF=0.1871;SITEPOST=1;SVLEN=1486;SVTYPE=LINE1;TSD=AGAAAATATAGGTCTC	GT	0|1
2	181925827	DEL_pindel_5663	AGACCACTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=3659;AF=0.730631;AFR_AF=0.7542;AMR_AF=0.7248;AN=5008;CS=DEL_pindel;EAS_AF=0.7718;END=181926149;EUR_AF=0.6531;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7403;SITEPOST=0.9837;SVTYPE=DEL_ALU	GT	1|1
2	182262200	ALU_umary_ALU_1807	G	<INS:ME:ALU>	.	.	AC=668;AF=0.133387;AFR_AF=0.0098;AMR_AF=0.1268;AN=5008;CS=ALU_umary;EAS_AF=0.1022;EUR_AF=0.2495;MEINFO=AluYc1,9,281,+;NS=2504;SAS_AF=0.2178;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AACAAGAAGGAATACAGAG	GT	0|1
2	182355971	DEL_pindel_5673	TAAGAATTACATCGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACAAGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCTAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4283;AF=0.855232;AFR_AF=0.8238;AMR_AF=0.866;AN=5008;CS=DEL_pindel;EAS_AF=0.8681;END=182356286;EUR_AF=0.8748;MEINFO=AluYg6,2,281,+;NS=2504;SAS_AF=0.8569;SITEPOST=0.9852;SVTYPE=DEL_ALU	GT	1|1
2	183315806	DEL_pindel_5685	TAAAAATATTTTAACTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAAGTCAGGAGATCGAGACCATCCCGGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	.	PASS	AC=2927;AF=0.584465;AFR_AF=0.5424;AMR_AF=0.5043;AN=5008;CS=DEL_pindel;EAS_AF=0.7163;END=183316121;EUR_AF=0.5318;MEINFO=AluYa4_1,1,281,+;NS=2504;SAS_AF=0.6166;SITEPOST=0.9754;SVTYPE=DEL_ALU	GT	1|0
2	183354710	DEL_pindel_5686	TGTGTAAAAATAAGGAGAAATCATCAAAGAAAACTGAGAAGGAGTAGCCAATGAAATAGATGGAGAACCAATAAA	T	.	PASS	AC=2064;AF=0.412141;AFR_AF=0.5257;AMR_AF=0.3055;AN=5008;CS=DEL_pindel;EAS_AF=0.3423;END=183354784;EUR_AF=0.3926;NS=2504;SAS_AF=0.4264;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
2	188215718	DEL_pindel_5748	TAAGAAATATGTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAATCCGGCCTGGGCTAAACAGCGGGACTCCGTCTCAAAAAAAAAAAAAA	T	.	PASS	AC=3426;AF=0.684105;AFR_AF=0.7421;AMR_AF=0.6542;AN=5008;CS=DEL_pindel;EAS_AF=0.6369;END=188216025;EUR_AF=0.7127;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.6462;SITEPOST=0.9809;SVTYPE=DEL_ALU	GT	1|1
2	189119663	UW_VH_236	A	<CN0>	100	PASS	AC=1364;AF=0.272364;AFR_AF=0.3805;AMR_AF=0.1527;AN=5008;CIEND=0,525;CIPOS=-547,0;CS=DEL_union;EAS_AF=0.248;END=189120979;EUR_AF=0.2107;MC=YL_CN_BEB_487,BI_GS_DEL1_B1_P0440_75,YL_CN_TSI_544;NS=2504;SAS_AF=0.2996;SVTYPE=DEL	GT	1|0
2	189959434	ALU_umary_ALU_1847	A	<INS:ME:ALU>	.	.	AC=2374;AF=0.474042;AFR_AF=0.3744;AMR_AF=0.4193;AN=5008;CS=ALU_umary;EAS_AF=0.4821;EUR_AF=0.6004;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.5092;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAACATACCA	GT	0|1
2	191635470	DEL_pindel_5812	GATGTGCATGATGCTTATCTATGGGATGTCCCTCGAGCATGCAGGCACTGCTGC	G	.	PASS	AC=2352;AF=0.469649;AFR_AF=0.593;AMR_AF=0.3401;AN=5008;CS=DEL_pindel;EAS_AF=0.3502;END=191635523;EUR_AF=0.4483;NS=2504;SAS_AF=0.5399;SITEPOST=0.9999;SVTYPE=DEL	GT	1|1
2	191680779	DEL_pindel_5817	AGGAACTCTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGC	A	.	PASS	AC=4129;AF=0.824481;AFR_AF=0.7874;AMR_AF=0.879;AN=5008;CS=DEL_pindel;EAS_AF=0.8482;END=191680874;EUR_AF=0.8231;NS=2504;SAS_AF=0.8129;SITEPOST=0.9803;SVTYPE=DEL	GT	0|1
2	193355404	DEL_pindel_5850	ACAAATCTTGATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAG	A	.	PASS	AC=4110;AF=0.820687;AFR_AF=0.7723;AMR_AF=0.8516;AN=5008;CS=DEL_pindel;EAS_AF=0.8423;END=193355708;EUR_AF=0.836;MEINFO=AluYa4_5,11,281,+;NS=2504;SAS_AF=0.8262;SITEPOST=0.9726;SVTYPE=DEL_ALU	GT	0|1
2	194689469	SI_BD_2516	T	<CN0>	100	PASS	AC=4218;AF=0.842252;AFR_AF=0.6573;AMR_AF=0.915;AN=5008;CIEND=-50,266;CIPOS=-266,50;CS=DEL_union;EAS_AF=0.9147;END=194698782;EUR_AF=0.9056;MC=EM_DL_DEL56116,YL_CN_ASW_636;NS=2504;SAS_AF=0.9008;SVTYPE=DEL	GT	1|1
2	195477627	DEL_pindel_5902	TTGGATGTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCTCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCAC	T	.	PASS	AC=1189;AF=0.23742;AFR_AF=0.1899;AMR_AF=0.3386;AN=5008;CS=DEL_pindel;EAS_AF=0.1567;END=195477734;EUR_AF=0.2167;MEINFO=AluYb,212,281,-;NS=2504;SAS_AF=0.3344;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	0|1
2	196031309	DEL_pindel_5915	GGAAAAGTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=4065;AF=0.811701;AFR_AF=0.7557;AMR_AF=0.8271;AN=5008;CS=DEL_pindel;EAS_AF=0.8284;END=196031614;EUR_AF=0.841;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.8292;SITEPOST=0.9883;SVTYPE=DEL_ALU	GT	1|1
2	196051814	DEL_pindel_5916	TAAAAAATAGGTTGGCTGCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGCAAGGGGAATATCACACTCGGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACTTATGTAACTAGCCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAACATTAAA	T	.	PASS	AC=3236;AF=0.646166;AFR_AF=0.6467;AMR_AF=0.6441;AN=5008;CS=DEL_pindel;EAS_AF=0.628;END=196052084;EUR_AF=0.671;MEINFO=LINE1,5094,5124,+;NS=2504;SAS_AF=0.6401;SITEPOST=0.9698;SVTYPE=DEL_LINE1	GT	1|1
2	196214818	BI_GS_DEL1_B1_P0447_186	T	<CN0>	100	PASS	AC=3568;AF=0.71246;AFR_AF=0.6573;AMR_AF=0.696;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5952;END=196215228;EUR_AF=0.8718;MC=DEL_pindel_5925;NS=2504;SAS_AF=0.7556;SVTYPE=DEL	GT	1|1
2	198758284	DUP_gs_CNV_2_198758284_198761579	G	<CN0>,<CN2>	.	PASS	AC=41,1;AF=0.0081869,0.00019968;AFR_AF=0.0008,0.0008;AMR_AF=0.0115,0;AN=5008;CS=DUP_gs;EAS_AF=0,0;END=198761579;EUR_AF=0.0318,0;MC=YL_CN_TSI_554,BI_GS_DEL1_B2_P0449_485,UW_VH_3346;NS=2504;SAS_AF=0,0;SITEPOST=0.9999;SVTYPE=CNV	GT	0|1
2	198894512	DEL_pindel_5972	TCTCCTGGATTCAAGTGATTCTCCTGCTTCAGTTTCCTGAGTAGCTGGGATTACAGGCATGCATCACCATGCCCAGCTAATTTTGTATTTTCAGTAGAGACGGGGTTTCACCATGTTGCCTAGGCTGATCTTGAATGC	T	.	PASS	AC=728;AF=0.145367;AFR_AF=0.1263;AMR_AF=0.1398;AN=5008;CS=DEL_pindel;EAS_AF=0.2113;END=198894649;EUR_AF=0.164;NS=2504;SAS_AF=0.0879;SITEPOST=0.9995;SVTYPE=DEL	GT	1|0
2	199779914	L1_umary_LINE1_489	T	<INS:ME:LINE1>	.	.	AC=152;AF=0.0303514;AFR_AF=0.0015;AMR_AF=0.0634;AN=5008;CS=L1_umary;EAS_AF=0.001;EUR_AF=0.0964;MEINFO=LINE1,10,5998,+;NS=2504;SAS_AF=0.0082;SITEPOST=1;SVLEN=5988;SVTYPE=LINE1;TSD=AGAAAGTATATAATCT	GT	1|0
2	200312454	BI_GS_DEL1_B2_P0451_222	A	<CN0>	100	PASS	AC=2100;AF=0.419329;AFR_AF=0.1838;AMR_AF=0.5418;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3532;END=200312679;EUR_AF=0.6789;NS=2504;SAS_AF=0.4519;SVTYPE=DEL	GT	1|0
2	202721648	DEL_pindel_6023	TAAGATAACTGGGTTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	T	.	PASS	AC=1672;AF=0.333866;AFR_AF=0.5681;AMR_AF=0.2651;AN=5008;CS=DEL_pindel;EAS_AF=0.2153;END=202721969;EUR_AF=0.3161;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2065;SITEPOST=0.9988;SVTYPE=DEL_ALU	GT	1|0
2	206113734	YL_CN_CEU_744	T	<CN0>	100	PASS	AC=8;AF=0.00159744;AFR_AF=0.0008;AMR_AF=0;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=206121786;EUR_AF=0.007;MC=BI_GS_DEL1_B5_P0457_136,UW_VH_2293;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0|1
2	206128030	UW_VH_2809	G	<CN0>	100	PASS	AC=183;AF=0.0365415;AFR_AF=0.0325;AMR_AF=0.0245;AN=5008;CIEND=0,260;CIPOS=-333,0;CS=DEL_union;EAS_AF=0.0407;END=206129895;EUR_AF=0.0527;MC=SI_BD_2570,YL_CN_PUR_722,BI_GS_DEL1_B1_P0457_116,EM_DL_DEL10589543;NS=2504;SAS_AF=0.0297;SVTYPE=DEL	GT	1|0
2	206731182	DEL_pindel_6101	CAAAAGAGACATTTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=3618;AF=0.722444;AFR_AF=0.6543;AMR_AF=0.745;AN=5008;CS=DEL_pindel;EAS_AF=0.744;END=206731505;EUR_AF=0.7714;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.726;SITEPOST=0.9705;SVTYPE=DEL_ALU	GT	1|1
2	208910336	DEL_pindel_6133	AATTTCCTTTATTTTTATTTTTATTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCAGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=1879;AF=0.3752;AFR_AF=0.4357;AMR_AF=0.3141;AN=5008;CS=DEL_pindel;EAS_AF=0.3919;END=208910651;EUR_AF=0.2356;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4632;SITEPOST=0.99835;SVTYPE=DEL_ALU	GT	1|0
2	208959107	DEL_pindel_6136	CGCCCAGTTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGCGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCTGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCG	C	.	PASS	AC=3545;AF=0.707867;AFR_AF=0.6838;AMR_AF=0.745;AN=5008;CS=DEL_pindel;EAS_AF=0.744;END=208959450;EUR_AF=0.6968;MEINFO=AluYb3a1,4,281,-;NS=2504;SAS_AF=0.6881;SITEPOST=0.9383;SVTYPE=DEL_ALU	GT	1|1
2	209061157	DEL_pindel_6142	TAGGAATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3381;AF=0.67512;AFR_AF=0.4803;AMR_AF=0.7017;AN=5008;CS=DEL_pindel;EAS_AF=0.7867;END=209061477;EUR_AF=0.7286;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7495;SITEPOST=0.9779;SVTYPE=DEL_ALU	GT	1|1
2	209451717	DEL_pindel_6154	TGTTTGTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3073;AF=0.613618;AFR_AF=0.7035;AMR_AF=0.6744;AN=5008;CS=DEL_pindel;EAS_AF=0.4673;END=209452044;EUR_AF=0.6193;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5941;SITEPOST=0.9868;SVTYPE=DEL_ALU	GT	1|1
2	212161556	DEL_pindel_6216	ATACATATGTATGTATGTATATACATACATATGTATGTATGTATATACATACATATGTATGTATG	A	.	PASS	AC=1479;AF=0.295327;AFR_AF=0.053;AMR_AF=0.2594;AN=5008;CS=DEL_pindel;EAS_AF=0.3284;END=212161620;EUR_AF=0.4165;NS=2504;SAS_AF=0.4898;SITEPOST=0.9986;SVTYPE=DEL	GT	0|1
2	212551245	DEL_pindel_6224	TGCCTCTAGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAA	T	.	PASS	AC=4010;AF=0.800719;AFR_AF=0.7791;AMR_AF=0.7925;AN=5008;CS=DEL_pindel;EAS_AF=0.8304;END=212551542;EUR_AF=0.7982;MEINFO=AluYb6_2,38,281,-;NS=2504;SAS_AF=0.8078;SITEPOST=0.9598;SVTYPE=DEL_ALU	GT	0|1
2	214775204	DEL_pindel_6267	TAAGAATTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTAGTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC	T	.	PASS	AC=2519;AF=0.502995;AFR_AF=0.2761;AMR_AF=0.5432;AN=5008;CS=DEL_pindel;EAS_AF=0.5268;END=214775511;EUR_AF=0.5417;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.7168;SITEPOST=0.9957;SVTYPE=DEL_ALU	GT	1|1
2	214778297	DEL_pindel_6268	ATATATGTACATGTACATATATGTATATGTACATGTACATATATGTATATGTACATGTACATATATG	A	.	PASS	AC=2488;AF=0.496805;AFR_AF=0.4183;AMR_AF=0.5202;AN=5008;CS=DEL_pindel;EAS_AF=0.5397;END=214778363;EUR_AF=0.5139;NS=2504;SAS_AF=0.5245;SITEPOST=0.99945;SVTYPE=DEL	GT	0|1
2	215201641	ALU_umary_ALU_1973	G	<INS:ME:ALU>	.	.	AC=2002;AF=0.39976;AFR_AF=0.112;AMR_AF=0.428;AN=5008;CS=ALU_umary;EAS_AF=0.4603;EUR_AF=0.5368;MEINFO=AluUndef,2,268,+;NS=2504;SAS_AF=0.5654;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=AAAGACTAAG	GT	0|1
2	215728762	BI_GS_DEL1_B1_P0466_668	T	<CN0>	100	PASS	AC=1629;AF=0.32528;AFR_AF=0.1853;AMR_AF=0.389;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3373;END=215730832;EUR_AF=0.3936;MC=EM_DL_DEL56743,SI_BD_2624,YL_CN_ESN_659,UW_VH_252;NS=2504;SAS_AF=0.3865;SVTYPE=DEL	GT	0|1
2	216548435	ALU_umary_ALU_1978	C	<INS:ME:ALU>	.	.	AC=921;AF=0.183906;AFR_AF=0.3109;AMR_AF=0.1628;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.2366;MEINFO=AluYb8,1,274,+;NS=2504;SAS_AF=0.1616;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=AAAAAATCAGTAAATTC	GT	0|1
2	217158346	DEL_pindel_6321	AAGCCAAACCCTCCAAACTATGTTTTTCATTTTCACAATAATTATTTTGTTCCTACAGTGCTTTTCTCCCTATAATTTTACTGGTATAAGACAAATGTACCTATTTCCTCTAACTGCCTCTAAATTTACTCAACCAGTACTAGAAAGAAGAACTTAGCCTCACAATAATTGAATTTAAATAACATCCAATTCTATGAAGTCAAACATGATCTGCATAATAAACAAACCAAGCTATATGGGGTCTGGCGGAAAAAAAGGTCACGTTTAATGTGTACATTTATAATCATATCTGTATTTCTAATGACCTAAATGTGTAATATACTGTCCGTTTGTCTTTCTGCATAACTCATCATTACCATCACCATTGTTACCAAACAGCTAC	A	.	PASS	AC=857;AF=0.171126;AFR_AF=0.0348;AMR_AF=0.2349;AN=5008;CS=DEL_pindel;EAS_AF=0.1776;END=217158727;EUR_AF=0.3022;NS=2504;SAS_AF=0.1687;SITEPOST=0.9984;SVTYPE=DEL	GT	1|0
2	218265091	ALU_umary_ALU_1987	G	<INS:ME:ALU>	.	.	AC=1425;AF=0.284545;AFR_AF=0.1997;AMR_AF=0.255;AN=5008;CS=ALU_umary;EAS_AF=0.371;EUR_AF=0.2266;MEINFO=AluYb11,4,281,+;NS=2504;SAS_AF=0.3906;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAGACTGGTGG	GT	0|1
2	220052322	BI_GS_DEL1_B5_P0471_61	G	<CN0>	100	PASS	AC=2021;AF=0.403554;AFR_AF=0.2315;AMR_AF=0.4035;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.2351;END=220052915;EUR_AF=0.6362;MC=SI_BD_2642,UW_VH_254,UW_VH_24714;NS=2504;SAS_AF=0.5706;SVTYPE=DEL	GT	1|1
2	220052751	YL_CN_ITU_607	T	<CN0>	100	PASS	AC=2023;AF=0.403954;AFR_AF=0.2315;AMR_AF=0.4035;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.2361;END=220056378;EUR_AF=0.6372;MC=UW_VH_2864,UW_VH_13801,BI_GS_DEL1_B1_P0471_47,UW_VH_9092,UW_VH_253,UW_VH_25240,EM_DL_DEL56842,UW_VH_3295;NS=2504;SAS_AF=0.5706;SVTYPE=DEL	GT	1|1
2	221503768	L1_umary_LINE1_515	T	<INS:ME:LINE1>	.	.	AC=940;AF=0.1877;AFR_AF=0.1649;AMR_AF=0.0951;AN=5008;CS=L1_umary;EAS_AF=0.2183;EUR_AF=0.1203;MEINFO=LINE1,4873,5996,-;NS=2504;SAS_AF=0.3221;SITEPOST=1;SVLEN=1123;SVTYPE=LINE1;TSD=ATCAACATGTTCATTTCTT	GT	1|0
2	221568789	UW_VH_10280	T	<CN0>	100	PASS	AC=4;AF=0.00079872;AFR_AF=0;AMR_AF=0.0014;AN=5008;CIEND=0,261;CIPOS=-232,0;CS=DEL_union;EAS_AF=0;END=221572221;EUR_AF=0.003;MC=BI_GS_DEL1_B5_P0472_777,EM_DL_DEL56897;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	1|0
2	223481690	DEL_pindel_6469	CAGAAAGATTGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCA	C	.	PASS	AC=3195;AF=0.637979;AFR_AF=0.7587;AMR_AF=0.6297;AN=5008;CS=DEL_pindel;EAS_AF=0.4206;END=223481979;EUR_AF=0.7028;MEINFO=AluYb6_2,40,281,-;NS=2504;SAS_AF=0.638;SITEPOST=0.98835;SVTYPE=DEL_ALU	GT	1|1
2	223797358	DEL_pindel_6482	TAAAAGCATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4407;AF=0.879992;AFR_AF=0.8918;AMR_AF=0.8689;AN=5008;CS=DEL_pindel;EAS_AF=0.9563;END=223797675;EUR_AF=0.7922;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.8834;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|1
2	225292994	EM_DL_DEL10598068	G	<CN0>	100	PASS	AC=2366;AF=0.472444;AFR_AF=0.6634;AMR_AF=0.389;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3641;END=225293946;EUR_AF=0.3827;MC=YL_CN_PEL_573,SI_BD_2675,YL_CN_MSL_577,YL_CN_PUR_747,YL_CN_GWD_863,UW_VH_6450,YL_CN_ESN_666,YL_CN_LWK_595,YL_CN_YRI_821,YL_CN_ASW_660,YL_CN_ITU_614,YL_CN_JPT_672;NS=2504;SAS_AF=0.4775;SVTYPE=DEL	GT	1|0
2	227017557	DEL_pindel_6573	TTCTTTCTCCATCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTC	T	.	PASS	AC=2159;AF=0.43111;AFR_AF=0.6014;AMR_AF=0.3934;AN=5008;CS=DEL_pindel;EAS_AF=0.2827;END=227017806;EUR_AF=0.4334;MEINFO=AluY,81,281,-;NS=2504;SAS_AF=0.3783;SITEPOST=0.9866;SVTYPE=DEL_ALU	GT	0|1
2	237701915	DEL_pindel_6781	GCAGCTCCAGGTCGTGAGCCCAGACAGGGCCTCAGCTCCAGGTCGTGAGCCCAGACAGGGCCT	G	.	PASS	AC=2592;AF=0.517572;AFR_AF=0.23;AMR_AF=0.611;AN=5008;CS=DEL_pindel;EAS_AF=0.7044;END=237701977;EUR_AF=0.5636;NS=2504;SAS_AF=0.6002;SITEPOST=0.97835;SVTYPE=DEL	GT	1|0
2	238553978	BI_GS_DEL1_B2_P0489_501	G	<CN0>	100	PASS	AC=21;AF=0.00419329;AFR_AF=0.0008;AMR_AF=0.0101;AN=5008;CIEND=-11,12;CIPOS=-11,12;CS=DEL_union;EAS_AF=0;END=238559216;EUR_AF=0.0119;MC=EM_DL_DEL57402,SI_BD_2757,YL_CN_TSI_592,UW_VH_4698;NS=2504;SAS_AF=0.001;SVTYPE=DEL	GT	1|0
2	240958939	DEL_pindel_6861	TAAAAAGAACGTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2270;AF=0.453275;AFR_AF=0.4909;AMR_AF=0.4885;AN=5008;CS=DEL_pindel;EAS_AF=0.4454;END=240959261;EUR_AF=0.4742;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.364;SITEPOST=0.9978;SVTYPE=DEL_ALU	GT	0|1
2	241125050	DEL_pindel_6878	GGAAGGGTGAGTTGCATGGTTACCCAGTCCATTCTTAGATGAAGGGTGAGTTGCACGGTTACCCAGTCCTTTCCTAGATAAAGGGTGAATTGCACAGTTACCCAGTTCTTTCCTAGAGGAAGAGTGAGTTGCAAGGTTACCCAGTCCACTCCTAGGTGAAGGGTGGGTGAAGGTGCACATTTACCCAGTCCTTTCCTAAATGGAAGGTGGGTTGCACATTTACGCAGTCCTTTCCTAGATGAAGGGTGAGTTGCAAGGTTACCCAGTCCTTTCCTAGGTGAAGGGTGAGTTGCAAGGTTACCCAGTCCTTTCCTAGATGAAGGGTGAGTTGCACGGTTACCCAGTCCATTCTTAGAT	G	.	PASS	AC=73;AF=0.0145767;AFR_AF=0.0053;AMR_AF=0.0086;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=241125406;EUR_AF=0.0378;NS=2504;SAS_AF=0.0215;SITEPOST=0.9933;SVTYPE=DEL	GT	0|1
3	228934	DUP_gs_CNV_3_228934_234185	G	<CN0>,<CN2>	.	PASS	AC=1416,2;AF=0.282748,0.00039936;AFR_AF=0.2542,0;AMR_AF=0.2147,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.3492,0.001;END=234185;EUR_AF=0.2187,0;MC=SI_BD_2836,YL_CN_PEL_599,UW_VH_11400,EM_DL_DEL62309,UW_VH_1719,BI_GS_DEL1_B2_P0495_150;NS=2504;SAS_AF=0.3671,0;SITEPOST=1;SVTYPE=CNV	GT	1|0
3	571750	DEL_pindel_6963	TTAACCTTTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTGGCTCTGTCGCCCAGGCTGGAGTGCGGTGGCGCGATCTCGGCTCATTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTAATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=479;AF=0.095647;AFR_AF=0.2874;AMR_AF=0.0447;AN=5008;CS=DEL_pindel;EAS_AF=0.0079;END=572075;EUR_AF=0.0199;MEINFO=AluYa,1,281,-;NS=2504;SAS_AF=0.0409;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	1|0
3	1629482	DEL_pindel_6997	CTATAAGTACAATATAGGTACAATCCCTGTTGTACCTATAAGTACAATATACGTACAGTA	C	.	PASS	AC=4966;AF=0.991613;AFR_AF=0.9932;AMR_AF=0.9957;AN=5008;CS=DEL_pindel;EAS_AF=0.9931;END=1629541;EUR_AF=0.9891;NS=2504;SAS_AF=0.9877;SITEPOST=1;SVTYPE=DEL	GT	1|1
3	2311586	DEL_pindel_7030	GTTTGTTTGTTTGTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTA	G	.	PASS	AC=2455;AF=0.490216;AFR_AF=0.3116;AMR_AF=0.5893;AN=5008;CS=DEL_pindel;EAS_AF=0.502;END=2311934;EUR_AF=0.5189;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6196;SITEPOST=0.999;SVTYPE=DEL_ALU	GT	1|1
3	2962004	ALU_umary_ALU_2103	T	<INS:ME:ALU>	.	.	AC=2146;AF=0.428514;AFR_AF=0.4024;AMR_AF=0.3775;AN=5008;CS=ALU_umary;EAS_AF=0.5079;EUR_AF=0.4235;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.4233;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAGGAGGCTGGAT	GT	1|1
3	6103050	ALU_umary_ALU_2121	T	<INS:ME:ALU>	.	.	AC=911;AF=0.181909;AFR_AF=0.1014;AMR_AF=0.2118;AN=5008;CS=ALU_umary;EAS_AF=0.3403;EUR_AF=0.0994;MEINFO=AluYb8,1,279,-;NS=2504;SAS_AF=0.1912;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=CCAGGATGGAATCTTT	GT	0|1
3	6525411	ALU_umary_ALU_2124	T	<INS:ME:ALU>	.	.	AC=401;AF=0.0800719;AFR_AF=0.0461;AMR_AF=0.0908;AN=5008;CS=ALU_umary;EAS_AF=0.0893;EUR_AF=0.1034;MEINFO=AluYa5,38,281,-;NS=2504;SAS_AF=0.0849;SITEPOST=1;SVLEN=243;SVTYPE=ALU;TSD=TGGCCTTCTTTTTT	GT	0|1
3	6650202	UW_VH_1720	G	<CN0>	100	PASS	AC=297;AF=0.0593051;AFR_AF=0.0053;AMR_AF=0.098;AN=5008;CIEND=0,397;CIPOS=-394,0;CS=DEL_union;EAS_AF=0.002;END=6654630;EUR_AF=0.165;MC=EM_DL_DEL62559,BI_GS_DEL1_B3_P0501_20,SI_BD_2893,YL_CN_BEB_545;NS=2504;SAS_AF=0.0552;SVTYPE=DEL	GT	0|1
3	6700872	BI_GS_DEL1_B4_P0501_172	C	<CN0>	100	PASS	AC=1590;AF=0.317492;AFR_AF=0.1392;AMR_AF=0.3573;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4236;END=6701254;EUR_AF=0.3588;MC=UW_VH_267;NS=2504;SAS_AF=0.3783;SVTYPE=DEL	GT	1|0
3	7130385	ALU_umary_ALU_2129	T	<INS:ME:ALU>	.	.	AC=2301;AF=0.459465;AFR_AF=0.6316;AMR_AF=0.4006;AN=5008;CS=ALU_umary;EAS_AF=0.3681;EUR_AF=0.3966;MEINFO=AluYb6_2,26,263,-;NS=2504;SAS_AF=0.4274;SITEPOST=1;SVLEN=237;SVTYPE=ALU;TSD=CACTGATTTCTTATT	GT	0|1
3	7538755	ALU_umary_ALU_2138	C	<INS:ME:ALU>	.	.	AC=238;AF=0.047524;AFR_AF=0.0197;AMR_AF=0.0605;AN=5008;CS=ALU_umary;EAS_AF=0.0198;EUR_AF=0.0805;MEINFO=AluUndef,10,281,+;NS=2504;SAS_AF=0.0706;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=AAGATTTACC	GT	1|1
3	8325606	BI_GS_DEL1_B5_P0503_440	A	<CN0>	100	PASS	AC=726;AF=0.144968;AFR_AF=0.0287;AMR_AF=0.1383;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.2183;END=8326807;EUR_AF=0.2475;MC=UW_VH_11202,YL_CN_PUR_802,UW_VH_11773,UW_VH_13315,EM_DL_DEL10675403,UW_VH_14442,SI_BD_2903,UW_VH_25241,YL_CN_ITU_660,UW_VH_268;NS=2504;SAS_AF=0.1258;SVTYPE=DEL	GT	1|0
3	10397456	DEL_pindel_7199	TAGAACTACTTGTCCTTTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGGGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2392;AF=0.477636;AFR_AF=0.416;AMR_AF=0.4597;AN=5008;CS=DEL_pindel;EAS_AF=0.5942;END=10397805;EUR_AF=0.4105;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5225;SITEPOST=0.9876;SVTYPE=DEL_ALU	GT	1|0
3	11645651	UW_VH_11106	C	<CN0>	100	PASS	AC=979;AF=0.195487;AFR_AF=0.1316;AMR_AF=0.2435;AN=5008;CIEND=0,209;CIPOS=-204,0;CS=DEL_union;EAS_AF=0.1786;END=11646732;EUR_AF=0.172;MC=SI_BD_2934,BI_GS_DEL1_B3_P0506_28,UW_VH_10838;NS=2504;SAS_AF=0.2894;SVTYPE=DEL	GT	1|0
3	12196517	DEL_pindel_7229	CTCCTTTTCACCTTTCAGACGAGATCGGGCGCGTTCAGGGTGGTATGGCCGTAGAT	C	.	PASS	AC=3114;AF=0.621805;AFR_AF=0.5371;AMR_AF=0.647;AN=5008;CS=DEL_pindel;EAS_AF=0.63;END=12196572;EUR_AF=0.67;NS=2504;SAS_AF=0.6605;SITEPOST=0.9852;SVTYPE=DEL	GT	0|1
3	12818468	ALU_umary_ALU_2160	T	<INS:ME:ALU>	.	.	AC=1303;AF=0.260184;AFR_AF=0.3177;AMR_AF=0.2723;AN=5008;CS=ALU_umary;EAS_AF=0.1379;EUR_AF=0.4105;MEINFO=AluUndef,7,280,-;NS=2504;SAS_AF=0.1452;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=GGGGCTGTTGTTTATT	GT	0|1
3	13681157	UW_VH_2294	T	<CN0>	100	PASS	AC=376;AF=0.0750799;AFR_AF=0.0061;AMR_AF=0.0735;AN=5008;CIEND=0,385;CIPOS=-403,0;CS=DEL_union;EAS_AF=0.0089;END=13682269;EUR_AF=0.1819;MC=SI_BD_2954,BI_GS_DEL1_B1_P0508_597;NS=2504;SAS_AF=0.1278;SVTYPE=DEL	GT	1|0
3	16239410	BI_GS_DEL1_B1_P0511_275	C	<CN0>	100	PASS	AC=1062;AF=0.212061;AFR_AF=0.2231;AMR_AF=0.2219;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2421;END=16241213;EUR_AF=0.2008;MC=SI_BD_2973,YL_CN_CHB_698,YL_CN_CEU_826,UW_VH_8196,EM_DL_DEL10678764,UW_VH_4780;NS=2504;SAS_AF=0.1708;SVTYPE=DEL	GT	1|0
3	17948538	DEL_pindel_7372	TAAGAAGTATGGTGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=512;AF=0.102236;AFR_AF=0.1082;AMR_AF=0.2003;AN=5008;CS=DEL_pindel;EAS_AF=0.0952;END=17948858;EUR_AF=0.0636;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0716;SITEPOST=1;SVTYPE=DEL_ALU	GT	0|1
3	19035452	ALU_umary_ALU_2188	T	<INS:ME:ALU>	.	.	AC=1984;AF=0.396166;AFR_AF=0.2791;AMR_AF=0.4078;AN=5008;CS=ALU_umary;EAS_AF=0.4722;EUR_AF=0.4493;MEINFO=AluUndef,1,272,+;NS=2504;SAS_AF=0.4131;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=AAAACCAAGGTCAT	GT	0|1
3	20919491	DEL_pindel_7422	TCTAATCAACTGCTAGCAAATATAAAGCAGGCAGAAAAACATGAAAAAGTGAGACTGGCCTAGCCTTCCAGCCTACATCTTTCTCCTGTGCTGGATACTTCCTGACCTCAAACATCAGACTCCACGTTCTTCAGTTTTGAAACTCGAACTGGCTCTCTTTTCTCCTCAAGCTTGCAGACAGCCTATTGTGGGACATTGTGATTGTGTAAGTTAATACTTAATAAATTCCCCTCTCTATATAAATACATCCTATTAGTTCTGTGCCTCTAGAGAACC	T	.	PASS	AC=377;AF=0.0752795;AFR_AF=0.1793;AMR_AF=0.0605;AN=5008;CS=DEL_pindel;EAS_AF=0;END=20919766;EUR_AF=0.0765;NS=2504;SAS_AF=0.0215;SITEPOST=1;SVTYPE=DEL	GT	0|1
3	21457497	DEL_pindel_7440	GCATGAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=3201;AF=0.639177;AFR_AF=0.7511;AMR_AF=0.5605;AN=5008;CS=DEL_pindel;EAS_AF=0.6062;END=21457820;EUR_AF=0.6322;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.5849;SITEPOST=0.9909;SVTYPE=DEL_ALU	GT	0|1
3	23764057	DEL_pindel_7477	TAAAATGTTTGATACAAGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAGCACGGTGAAACCCCTTCTCTACTAAAAATACAAAAAATTAGCCGGGAGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGCCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCGGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGAGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2026;AF=0.404553;AFR_AF=0.3132;AMR_AF=0.3156;AN=5008;CS=DEL_pindel;EAS_AF=0.5089;END=23764387;EUR_AF=0.4076;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.4806;SITEPOST=0.9976;SVTYPE=DEL_ALU	GT	1|0
3	25030880	UW_VH_3644	T	<CN0>	100	PASS	AC=2580;AF=0.515176;AFR_AF=0.5318;AMR_AF=0.6081;AN=5008;CIEND=0,486;CIPOS=-582,0;CS=DEL_union;EAS_AF=0.5397;END=25032246;EUR_AF=0.4135;MC=YL_CN_TSI_633,SI_BD_3013,UW_VH_16306,BI_GS_DEL1_B1_P0520_28;NS=2504;SAS_AF=0.5061;SVTYPE=DEL	GT	0|1
3	25278459	ALU_umary_ALU_2227	T	<INS:ME:ALU>	.	.	AC=696;AF=0.138978;AFR_AF=0.1445;AMR_AF=0.0793;AN=5008;CS=ALU_umary;EAS_AF=0.1091;EUR_AF=0.1292;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2147;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TCCTGTTTCTTT	GT	0|1
3	26123847	DEL_pindel_7524	TACATTTATACATACATACATAAATACATAACATATACTTGCATATATGTGTGTGGGTATATATATGTGTGTGTGTGTGTGCATATATATATATATATATATATATGCAAGTTAACAGAATAATATGGA	T	.	PASS	AC=3239;AF=0.646765;AFR_AF=0.261;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.9286;END=26123975;EUR_AF=0.7922;NS=2504;SAS_AF=0.6984;SITEPOST=0.9978;SVTYPE=DEL	GT	1|1
3	26432727	DUP_gs_CNV_3_26432727_26439290	A	<CN0>,<CN2>,<CN3>	.	PASS	AC=148,8,2;AF=0.0295527,0.00159744,0.00039936;AFR_AF=0.0136,0.003,0.0015;AMR_AF=0.036,0.0014,0;AN=5008;CS=DUP_gs;EAS_AF=0.002,0,0;END=26439290;EUR_AF=0.0994,0.003,0;NS=2504;SAS_AF=0.0031,0,0;SITEPOST=1;SVTYPE=CNV	GT	1|0
3	26469887	DEL_pindel_7537	CACTAACAATGAAATATAACTTTATCTTTTTAAATTTGGGTGTTTATTTTTGACTCTAACAGCCATCTCTTTGGAGAAGTAATTAGCTTCTTAGTA	C	.	PASS	AC=837;AF=0.167133;AFR_AF=0.0545;AMR_AF=0.1614;AN=5008;CS=DEL_pindel;EAS_AF=0.375;END=26469982;EUR_AF=0.1392;NS=2504;SAS_AF=0.138;SITEPOST=0.9997;SVTYPE=DEL	GT	1|0
3	26524464	L1_umary_LINE1_567	T	<INS:ME:LINE1>	.	.	AC=951;AF=0.189896;AFR_AF=0.1536;AMR_AF=0.1484;AN=5008;CS=L1_umary;EAS_AF=0.2321;EUR_AF=0.16;MEINFO=LINE1,4685,6005,-;NS=2504;SAS_AF=0.2556;SITEPOST=1;SVLEN=1320;SVTYPE=LINE1;TSD=AAATAGCCACGTTTTTCT	GT	0|1
3	29550384	ALU_umary_ALU_2253	T	<INS:ME:ALU>	.	.	AC=672;AF=0.134185;AFR_AF=0.0825;AMR_AF=0.1023;AN=5008;CS=ALU_umary;EAS_AF=0.3115;EUR_AF=0.0408;MEINFO=AluYb8,1,280,-;NS=2504;SAS_AF=0.1401;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TAATGATCGCCATTCT	GT	0|1
3	31856630	DEL_pindel_7640	AGAGAGATGCCCTGCCAGCCCCTGGCTTGCTCTTCCCGCCCTGAGACAACATGAACACC	A	.	PASS	AC=1795;AF=0.358427;AFR_AF=0.2625;AMR_AF=0.4049;AN=5008;CS=DEL_pindel;EAS_AF=0.4256;END=31856688;EUR_AF=0.3559;NS=2504;SAS_AF=0.3885;SITEPOST=0.9933;SVTYPE=DEL	GT	0|1
3	32102050	BI_GS_DEL1_B1_P0527_95	C	<CN0>	100	PASS	AC=2457;AF=0.490615;AFR_AF=0.2284;AMR_AF=0.6311;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4147;END=32107887;EUR_AF=0.6928;MC=YL_CN_ASW_722,YL_CN_CLM_587,SI_BD_3058,EM_DL_DEL63333,UW_VH_4625;NS=2504;SAS_AF=0.6155;SVTYPE=DEL	GT	1|0
3	32203861	DEL_pindel_7651	ACCTTAATTACCTTTTCTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGC	A	.	PASS	AC=1970;AF=0.393371;AFR_AF=0.4652;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.4931;END=32204143;EUR_AF=0.2704;MEINFO=AluYb6_2,34,281,-;NS=2504;SAS_AF=0.3783;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	1|0
3	32940758	DEL_pindel_7674	ATCCAAGAGGATTGATGACATGTCCACACAAAAACTAGTACATGAATGTTCATAGCAACATGATTCATAATAGCCCCAAATGCAGGCAACCCAAATT	A	.	PASS	AC=888;AF=0.177316;AFR_AF=0.1407;AMR_AF=0.2219;AN=5008;CS=DEL_pindel;EAS_AF=0.0208;END=32940854;EUR_AF=0.2982;NS=2504;SAS_AF=0.2321;SITEPOST=1;SVTYPE=DEL	GT	1|0
3	35051657	DEL_pindel_7727	ATATTTAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=3442;AF=0.6873;AFR_AF=0.7012;AMR_AF=0.6844;AN=5008;CS=DEL_pindel;EAS_AF=0.6845;END=35051985;EUR_AF=0.6501;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7117;SITEPOST=0.9502;SVTYPE=DEL_ALU	GT	0|1
3	35709332	DEL_pindel_7732	CAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGGAGGAGGAGGAGGAGGAGGAGAAGGA	C	.	PASS	AC=344;AF=0.0686901;AFR_AF=0.0635;AMR_AF=0.0706;AN=5008;CS=DEL_pindel;EAS_AF=0.0526;END=35709431;EUR_AF=0.0706;NS=2504;SAS_AF=0.089;SITEPOST=0.9904;SVTYPE=DEL	GT	1|0
3	36108120	DEL_pindel_7740	GCGTTTCTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=2577;AF=0.514577;AFR_AF=0.2799;AMR_AF=0.5173;AN=5008;CS=DEL_pindel;EAS_AF=0.7093;END=36108438;EUR_AF=0.5318;MEINFO=AluYa1_1,2,281,-;NS=2504;SAS_AF=0.6115;SITEPOST=0.99725;SVTYPE=DEL_ALU	GT	0|1
3	37361602	ALU_umary_ALU_2292	T	<INS:ME:ALU>	.	.	AC=529;AF=0.105631;AFR_AF=0.003;AMR_AF=0.1081;AN=5008;CS=ALU_umary;EAS_AF=0.1548;EUR_AF=0.1402;MEINFO=AluUndef,67,281,-;NS=2504;SAS_AF=0.1564;SITEPOST=1;SVLEN=214;SVTYPE=ALU;TSD=null	GT	0|1
3	38399708	ALU_umary_ALU_2298	T	<INS:ME:ALU>	.	.	AC=1673;AF=0.334065;AFR_AF=0.2474;AMR_AF=0.3386;AN=5008;CS=ALU_umary;EAS_AF=0.379;EUR_AF=0.3559;MEINFO=AluUndef,22,264,+;NS=2504;SAS_AF=0.3793;SITEPOST=1;SVLEN=242;SVTYPE=ALU;TSD=AAAAGTTTGGT	GT	0|1
3	39260355	DEL_pindel_7785	ACGAAGCTCAGCCTGGTTCCACCAATGTTTCCTCAGGACTGGATTCACATTTGTGTTCTGGGAGTGC	A	.	PASS	AC=202;AF=0.0403355;AFR_AF=0.0681;AMR_AF=0.0259;AN=5008;CS=DEL_pindel;EAS_AF=0.0456;END=39260421;EUR_AF=0.0089;NS=2504;SAS_AF=0.0399;SITEPOST=0.9996;SVTYPE=DEL	GT	1|0
3	40241622	ALU_umary_ALU_2306	T	<INS:ME:ALU>	.	.	AC=1385;AF=0.276558;AFR_AF=0.0908;AMR_AF=0.255;AN=5008;CS=ALU_umary;EAS_AF=0.4603;EUR_AF=0.2883;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3415;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TACATTTTCTTTTT	GT	1|1
3	45542662	ALU_umary_ALU_2325	T	<INS:ME:ALU>	.	.	AC=1719;AF=0.343251;AFR_AF=0.0635;AMR_AF=0.4207;AN=5008;CS=ALU_umary;EAS_AF=0.4861;EUR_AF=0.4364;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0.4233;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TGGAATTTTT	GT	1|0
3	45768351	DEL_pindel_7901	TGCTTTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2474;AF=0.49401;AFR_AF=0.556;AMR_AF=0.5231;AN=5008;CS=DEL_pindel;EAS_AF=0.3661;END=45768676;EUR_AF=0.6272;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3845;SITEPOST=0.9987;SVTYPE=DEL_ALU	GT	1|1
3	48957701	YL_CN_ITU_698	A	<CN0>	100	PASS	AC=3750;AF=0.748802;AFR_AF=0.5454;AMR_AF=0.7608;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9444;END=48959056;EUR_AF=0.6501;MC=YL_CN_ASW_735;NS=2504;SAS_AF=0.9151;SVTYPE=DEL	GT	1|1
3	49494276	DEL_pindel_7990	TGATGGTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	T	.	PASS	AC=4042;AF=0.807109;AFR_AF=0.7542;AMR_AF=0.8184;AN=5008;CS=DEL_pindel;EAS_AF=0.8274;END=49494605;EUR_AF=0.837;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.819;SITEPOST=0.9806;SVTYPE=DEL_ALU	GT	1|1
3	50123658	BI_GS_DEL1_B3_P0545_3	G	<CN0>	100	PASS	AC=79;AF=0.0157748;AFR_AF=0.0015;AMR_AF=0.0187;AN=5008;CIEND=-34,35;CIPOS=-34,35;CS=DEL_union;EAS_AF=0.001;END=50124725;EUR_AF=0.0577;MC=UW_VH_2019,SI_BD_3156;NS=2504;SAS_AF=0.0051;SVTYPE=DEL	GT	0|1
3	50879175	ALU_umary_ALU_2347	T	<INS:ME:ALU>	.	.	AC=2678;AF=0.534744;AFR_AF=0.4592;AMR_AF=0.438;AN=5008;CS=ALU_umary;EAS_AF=0.4782;EUR_AF=0.668;MEINFO=AluUndef,2,280,-;NS=2504;SAS_AF=0.6268;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TATTGTTACCTTTTCT	GT	1|1
3	53027106	UW_VH_10112	T	<CN0>	100	PASS	AC=275;AF=0.0549121;AFR_AF=0.0068;AMR_AF=0.1052;AN=5008;CIEND=0,324;CIPOS=-310,0;CS=DEL_union;EAS_AF=0.0546;END=53038920;EUR_AF=0.0775;MC=UW_VH_2718,YL_CN_BEB_570,BI_GS_DEL1_B2_P0548_15,EM_DL_DEL63845;NS=2504;SAS_AF=0.0613;SVTYPE=DEL	GT	1|0
3	55788580	L1_umary_LINE1_590	A	<INS:ME:LINE1>	.	.	AC=1868;AF=0.373003;AFR_AF=0.1952;AMR_AF=0.3026;AN=5008;CS=L1_umary;EAS_AF=0.4464;EUR_AF=0.4334;MEINFO=LINE1,1,6010,+;NS=2504;SAS_AF=0.5256;SITEPOST=1;SVLEN=6009;SVTYPE=LINE1;TSD=AAATATGAATTTA	GT	1|1
3	56604704	BI_GS_DEL1_B1_P0551_612	A	<CN0>	100	PASS	AC=3249;AF=0.648762;AFR_AF=0.6029;AMR_AF=0.7839;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5417;END=56604961;EUR_AF=0.8459;MC=DEL_pindel_8129,UW_VH_283;NS=2504;SAS_AF=0.5225;SVTYPE=DEL	GT	1|1
3	59852903	L1_umary_LINE1_597	A	<INS:ME:LINE1>	.	.	AC=2726;AF=0.544329;AFR_AF=0.7148;AMR_AF=0.3487;AN=5008;CS=L1_umary;EAS_AF=0.5714;EUR_AF=0.4652;MEINFO=LINE1,5089,6018,-;NS=2504;SAS_AF=0.5061;SITEPOST=1;SVLEN=929;SVTYPE=LINE1;TSD=AATAATCAGCAGAACCA	GT	1|0
3	61475048	DEL_pindel_8250	AAGCTTACATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=1203;AF=0.240216;AFR_AF=0.3782;AMR_AF=0.2406;AN=5008;CS=DEL_pindel;EAS_AF=0.1349;END=61475371;EUR_AF=0.1511;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.2536;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	1|0
3	61666415	DEL_pindel_8255	GTGGTACAGGTTGCAGGGAGGTGGGGATGGGGATGACTAGGGTCACAGCAGGCAATAACTAGGGTTATTGGCACCCGGTTGGTGTTTGGTGCCTGCTGTGTAACTTGCTGGGTGTTGGGAACCTGTATATGGCATATGCCATGTGCACAGTGGGATGTGTTTAAAATGTGGGAGACAGGAGCTGTATGGAAATCATTATTTTCAAATGCGGTCATGGCTTTTAGGTTGTGAATTTTTGTTCCTTTCCAAAACCGGTTTAGATGAGCAGCTT	G	.	PASS	AC=736;AF=0.146965;AFR_AF=0.1074;AMR_AF=0.2046;AN=5008;CS=DEL_pindel;EAS_AF=0.0883;END=61666685;EUR_AF=0.1938;NS=2504;SAS_AF=0.1718;SITEPOST=0.95435;SVTYPE=DEL	GT	0|1
3	63540965	ALU_umary_ALU_2401	T	<INS:ME:ALU>	.	.	AC=1005;AF=0.200679;AFR_AF=0.0817;AMR_AF=0.1455;AN=5008;CS=ALU_umary;EAS_AF=0.2361;EUR_AF=0.2545;MEINFO=AluYb8,1,281,-;NS=2504;SAS_AF=0.3088;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAAAATACTTCCT	GT	1|1
3	66951653	ALU_umary_ALU_2413	T	<INS:ME:ALU>	.	.	AC=218;AF=0.0435303;AFR_AF=0.0265;AMR_AF=0.1196;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0547;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.045;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TGATTTTGTTGATCTTTT	GT	1|0
3	68634740	UW_VH_2022	G	<CN0>	100	PASS	AC=2283;AF=0.455871;AFR_AF=0.2897;AMR_AF=0.3256;AN=5008;CIEND=0,567;CIPOS=-516,0;CS=DEL_union;EAS_AF=0.8204;END=68640254;EUR_AF=0.3539;MC=EM_DL_DEL64242,BI_GS_DEL1_B1_P0563_617,SI_BD_3234,YL_CN_TSI_658;NS=2504;SAS_AF=0.502;SVTYPE=DEL	GT	1|0
3	68739655	SI_BD_3235	C	<CN0>	100	PASS	AC=3439;AF=0.686701;AFR_AF=0.4516;AMR_AF=0.6066;AN=5008;CIEND=-50,233;CIPOS=-233,106;CS=DEL_union;EAS_AF=0.9048;END=68747879;EUR_AF=0.6581;MC=EM_DL_DEL64243,UW_VH_12502,YL_CN_ESN_761;NS=2504;SAS_AF=0.8661;SVTYPE=DEL	GT	1|0
3	70415105	DEL_pindel_8396	TTGTGCTTTACCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCC	T	.	PASS	AC=2109;AF=0.421126;AFR_AF=0.4455;AMR_AF=0.4597;AN=5008;CS=DEL_pindel;EAS_AF=0.3542;END=70415440;EUR_AF=0.4672;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3824;SITEPOST=0.9931;SVTYPE=DEL_ALU	GT	1|1
3	73063077	DEL_pindel_8445	CCACCGCGCCCGGGCTTGTATTTGGATATCTTACCAAAACACAAAAATTTACCTCGTTGTCTTCATGGGCTGCATAATATTTTATTGTTTTGGGTGTTCTTTATTTAACCTGTCTTCTTTGATGGTTTTTTGGGCAGTTTACAGTTACCAACCAATTCAAACAGTGCTTAAGTTAATATACTGGCACAGATGTAAGAGTGGGATTTATGGGTTCATGATTATGTACGTTACTATGTTTGACAGATACTGCCAGCTGGCTTTCCAAAAAACTTGTTCAGTATGTGCTTCTACTAGCAGTATATGAAAGTTATCTCTATATCCATGTTAGCACCAAGCATTATTCAGATTTTAAAATTATTTTTATTTTTATATTTATTTTTGAGACCGGGTCTCACTCTGGCCCAGGCTGGAGTGCAGTGGCATGATCATAGCTTACTGCAACCTCAAACTCCTAGGCTCAAGTGATTTTCCCACCTGA	C	.	PASS	AC=1073;AF=0.214257;AFR_AF=0.205;AMR_AF=0.232;AN=5008;CS=DEL_pindel;EAS_AF=0.0853;END=73063554;EUR_AF=0.332;NS=2504;SAS_AF=0.226;SITEPOST=0.9991;SVTYPE=DEL	GT	0|1
3	74765412	DEL_pindel_8483	TTAAAGTTATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1613;AF=0.322085;AFR_AF=0.4039;AMR_AF=0.3386;AN=5008;CS=DEL_pindel;EAS_AF=0.1111;END=74765735;EUR_AF=0.4165;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.32;SITEPOST=0.9954;SVTYPE=DEL_ALU	GT	0|1
3	75367119	DEL_pindel_8502	GTGGGTTAATCAAGAACAATGTCATCTGTGGAGCCTCTTGGAAGCAGTAAATGGCCCACTCCTTTTAAAATTGCAGGCATGC	G	.	PASS	AC=309;AF=0.0617013;AFR_AF=0.0325;AMR_AF=0.0476;AN=5008;CS=DEL_pindel;EAS_AF=0.0506;END=75367200;EUR_AF=0.0606;NS=2504;SAS_AF=0.1237;SITEPOST=0.9994;SVTYPE=DEL	GT	0|1
3	75423550	DUP_gs_CNV_3_75423550_75458952	T	<CN0>,<CN2>	.	PASS	AC=82,1;AF=0.0163738,0.00019968;AFR_AF=0.0038,0;AMR_AF=0.0159,0;AN=5008;CS=DUP_gs;EAS_AF=0.002,0.001;END=75458952;EUR_AF=0.0586,0;NS=2504;SAS_AF=0.0051,0;SITEPOST=1;SVTYPE=CNV	GT	0|1
3	75423612	EM_DL_DEL64345	C	<CN0>	100	PASS	AC=84;AF=0.0167732;AFR_AF=0.0038;AMR_AF=0.0159;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.001;END=75642120;EUR_AF=0.0616;NS=2504;SAS_AF=0.0051;SVTYPE=DEL	GT	0|1
3	75495797	DUP_gs_CNV_3_75495797_75527865	T	<CN0>,<CN2>	.	PASS	AC=81,11;AF=0.0161741,0.00219649;AFR_AF=0.0038,0.0061;AMR_AF=0.0159,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.001;END=75527865;EUR_AF=0.0586,0;NS=2504;SAS_AF=0.0051,0;SITEPOST=1;SVTYPE=CNV	GT	0|1
3	75532164	DUP_gs_CNV_3_75532164_75569195	A	<CN0>,<CN2>	.	PASS	AC=82,1;AF=0.0163738,0.00019968;AFR_AF=0.0038,0;AMR_AF=0.0159,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.001;END=75569195;EUR_AF=0.0586,0;NS=2504;SAS_AF=0.0061,0;SITEPOST=1;SVTYPE=CNV	GT	0|1
3	75597940	DUP_gs_CNV_3_75597940_75615947	G	<CN0>,<CN2>	.	PASS	AC=82,3;AF=0.0163738,0.00059904;AFR_AF=0.0038,0;AMR_AF=0.0159,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.001;END=75615947;EUR_AF=0.0586,0;NS=2504;SAS_AF=0.0061,0.002;SITEPOST=1;SVTYPE=CNV	GT	0|1
3	76222309	ALU_umary_ALU_2455	A	<INS:ME:ALU>	.	.	AC=662;AF=0.132188;AFR_AF=0.1596;AMR_AF=0.1369;AN=5008;CS=ALU_umary;EAS_AF=0.2113;EUR_AF=0.0517;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.093;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAATTCTTTGA	GT	0|1
3	76985883	ALU_umary_ALU_2461	T	<INS:ME:ALU>	.	.	AC=1879;AF=0.3752;AFR_AF=0.4334;AMR_AF=0.304;AN=5008;CS=ALU_umary;EAS_AF=0.373;EUR_AF=0.3131;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.4131;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGAATTCATTTT	GT	1|0
3	80062916	BI_GS_DEL1_B2_P0575_38	T	<CN0>	100	PASS	AC=2747;AF=0.548522;AFR_AF=0.2799;AMR_AF=0.67;AN=5008;CIEND=-36,37;CIPOS=-36,37;CS=DEL_union;EAS_AF=0.5694;END=80064350;EUR_AF=0.6123;MC=YL_CN_TSI_675,UW_VH_2577,SI_BD_3290,YL_CN_CHB_754,YL_CN_PUR_880,YL_CN_FIN_704,YL_CN_STU_722,YL_CN_KHV_769,YL_CN_PJL_755,YL_CN_CHS_737,YL_CN_GWD_1010,YL_CN_GIH_546;NS=2504;SAS_AF=0.7382;SVTYPE=DEL	GT	1|0
3	80964882	ALU_umary_ALU_2478	T	<INS:ME:ALU>	.	.	AC=897;AF=0.179113;AFR_AF=0.0651;AMR_AF=0.2104;AN=5008;CS=ALU_umary;EAS_AF=0.1022;EUR_AF=0.2535;MEINFO=AluUndef,1,260,+;NS=2504;SAS_AF=0.3139;SITEPOST=1;SVLEN=259;SVTYPE=ALU;TSD=AAAATTT	GT	1|0
3	81346065	DEL_pindel_8599	TAAAAATGAGTACCTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCATAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGGACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1563;AF=0.312101;AFR_AF=0.3911;AMR_AF=0.2277;AN=5008;CS=DEL_pindel;EAS_AF=0.3899;END=81346380;EUR_AF=0.2684;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2301;SITEPOST=0.9994;SVTYPE=DEL_ALU	GT	0|1
3	81907492	DEL_pindel_8609	TAAAAACTGGTAAACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3875;AF=0.773762;AFR_AF=0.7428;AMR_AF=0.7867;AN=5008;CS=DEL_pindel;EAS_AF=0.8046;END=81907812;EUR_AF=0.7734;MEINFO=AluYa5a1,1,281,+;NS=2504;SAS_AF=0.7751;SITEPOST=0.9471;SVTYPE=DEL_ALU	GT	0|1
3	83304066	ALU_umary_ALU_2487	A	<INS:ME:ALU>	.	.	AC=2091;AF=0.417532;AFR_AF=0.3843;AMR_AF=0.4207;AN=5008;CS=ALU_umary;EAS_AF=0.4415;EUR_AF=0.4205;MEINFO=AluUndef,17,280,-;NS=2504;SAS_AF=0.4325;SITEPOST=1;SVLEN=263;SVTYPE=ALU;TSD=A	GT	1|0
3	84104923	UW_VH_1725	T	<CN0>	100	PASS	AC=815;AF=0.16274;AFR_AF=0.0234;AMR_AF=0.1614;AN=5008;CIEND=0,418;CIPOS=-380,0;CS=DEL_union;EAS_AF=0.2391;END=84107402;EUR_AF=0.2167;MC=BI_GS_DEL1_B5_P0579_98,YL_CN_PJL_758,YL_CN_CHB_758,EM_DL_DEL64493;NS=2504;SAS_AF=0.2178;SVTYPE=DEL	GT	0|1
3	84404171	DEL_pindel_8634	TACACATGCTTATAAAATCATTACATCTTCTCCTGTGAATTCAGCCACCATTTCTTTGCCAATAGCTCTAAAA	T	.	PASS	AC=482;AF=0.096246;AFR_AF=0.1974;AMR_AF=0.0994;AN=5008;CS=DEL_pindel;EAS_AF=0;END=84404243;EUR_AF=0.1014;NS=2504;SAS_AF=0.0511;SITEPOST=0.9988;SVTYPE=DEL	GT	1|0
3	85576571	L1_umary_LINE1_629	G	<INS:ME:LINE1>	.	.	AC=1334;AF=0.266374;AFR_AF=0.0582;AMR_AF=0.2968;AN=5008;CS=L1_umary;EAS_AF=0.4921;EUR_AF=0.336;MEINFO=LINE1,30,6019,-;NS=2504;SAS_AF=0.2219;SITEPOST=1;SVLEN=5989;SVTYPE=LINE1;TSD=AAAACAAAGAAAGAAAAAATTCTGTGG	GT	1|0
3	86213403	DEL_pindel_8664	ATTAACGTATATAAACTTTCATAGCCAAATAAAATATAGAGGCAAATCTCTGAAATTAAAATGTTTTATTTGGAAGAAAATAATTGCAATTCTGGGCATATACATAGACCAGCTGGTCTTCTATATGTCCAAAGAACAAAGAGAAGATGAGAGATTTTGTAAAAAGGATAAATGTTATGTATTTCTCTTTGAAAAAAATTCATTGGCATTGGTAAGGTCTTGAGGAACTGGCAAGTTCTGATTAGTGAGTGACAGCAGTGGCAAACTAGTCTTAGAGTTGCAGCAGGTCGTTTCAGTAGCCACTACATAAAACTACTT	A	.	PASS	AC=958;AF=0.191294;AFR_AF=0.0272;AMR_AF=0.2248;AN=5008;CS=DEL_pindel;EAS_AF=0.2619;END=86213720;EUR_AF=0.2634;NS=2504;SAS_AF=0.2423;SITEPOST=1;SVTYPE=DEL	GT	0|1
3	87482522	DEL_pindel_8702	ATTAAGGGTATAAATCTATTGAACTAAAGTCATATGTTTATGCACTTGCCTTAGAGGAGTGTTAGACATGAATTCTAAATTTCTT	A	.	PASS	AC=586;AF=0.117013;AFR_AF=0.2504;AMR_AF=0.0403;AN=5008;CS=DEL_pindel;EAS_AF=0.0843;END=87482606;EUR_AF=0.0636;NS=2504;SAS_AF=0.0798;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
3	88453730	DEL_pindel_8721	CCTCTCCATTTACTCTTTGTTTCTCTCTTTCTAGAAACACGACTTTATAACCTATTATTATCCATACAACTCCATCATTCTGAGTTGTACTTCCTCTTGTGCTGTGTTAATACTTATTTGCCCCTAATTCTTAAGTTGATGTCTTTTTCTCTTCGAACTTTTGTTCTATTTCTTCCTTTGTCCAAACATCACCGCTCTCTGCCTTCATTTATTCCTTTAGATTGAAAAAAATTCTTTGTGTGACTAAAGTTTCTTAAAGCTTCTGAACCTTCTACCAGT	C	.	PASS	AC=605;AF=0.120807;AFR_AF=0.0431;AMR_AF=0.0735;AN=5008;CS=DEL_pindel;EAS_AF=0.2252;END=88454008;EUR_AF=0.1004;NS=2504;SAS_AF=0.1728;SITEPOST=1;SVTYPE=DEL	GT	1|0
3	95116192	DEL_pindel_8783	ACCAACCTGACTTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=2014;AF=0.402157;AFR_AF=0.5915;AMR_AF=0.2003;AN=5008;CS=DEL_pindel;EAS_AF=0.3591;END=95116522;EUR_AF=0.327;MEINFO=AluYb3a1,2,281,-;NS=2504;SAS_AF=0.411;SITEPOST=0.99095;SVTYPE=DEL_ALU	GT	0|1
3	95465681	UW_VH_20349	A	<CN0>	100	PASS	AC=1119;AF=0.223442;AFR_AF=0.2148;AMR_AF=0.1023;AN=5008;CIEND=0,104;CIPOS=-194,0;CS=DEL_union;EAS_AF=0.2679;END=95470805;EUR_AF=0.2336;MC=SI_BD_3356,BI_GS_DEL1_B5_P0590_438,UW_VH_4186;NS=2504;SAS_AF=0.2648;SVTYPE=DEL	GT	0|1
3	95465761	UW_VH_297	A	<CN0>	100	PASS	AC=1782;AF=0.355831;AFR_AF=0.3154;AMR_AF=0.1758;AN=5008;CIEND=0,277;CIPOS=-219,0;CS=DEL_union;EAS_AF=0.4177;END=95468120;EUR_AF=0.3797;MC=SI_BD_3357,YL_CN_YRI_971,YL_CN_JPT_811,BI_GS_DEL1_B1_P0590_322,YL_CN_TSI_687,YL_CN_LWK_716,YL_CN_CDX_653,YL_CN_GIH_552,EM_DL_DEL64880,YL_CN_ASW_772;NS=2504;SAS_AF=0.4499;SVTYPE=DEL	GT	0|1
3	95874517	ALU_umary_ALU_2535	C	<INS:ME:ALU>	.	.	AC=683;AF=0.136382;AFR_AF=0.0681;AMR_AF=0.2061;AN=5008;CS=ALU_umary;EAS_AF=0.1329;EUR_AF=0.2038;MEINFO=AluYa5,2,281,+;NS=2504;SAS_AF=0.1135;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGAAATGC	GT	1|0
3	98410648	UW_VH_2359	C	<CN0>	100	PASS	AC=1795;AF=0.358427;AFR_AF=0.0976;AMR_AF=0.4409;AN=5008;CIEND=0,359;CIPOS=-505,0;CS=DEL_union;EAS_AF=0.4306;END=98414803;EUR_AF=0.4513;MC=BI_GS_DEL1_B2_P0593_299,EM_DL_DEL64985,YL_CN_PEL_681;NS=2504;SAS_AF=0.4826;SVTYPE=DEL	GT	0|1
3	98899063	BI_GS_DEL1_B1_P0593_764	T	<CN0>	100	PASS	AC=4035;AF=0.805711;AFR_AF=0.7549;AMR_AF=0.8386;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8452;END=98902396;EUR_AF=0.7803;MC=UW_VH_5333,SI_BD_3375,UW_VH_15599,YL_CN_ACB_843,UW_VH_18302,UW_VH_298,UW_VH_20908,EM_DL_DEL64996,UW_VH_2968;NS=2504;SAS_AF=0.8364;SVTYPE=DEL	GT	1|1
3	98982423	DEL_pindel_8892	TATATATATGATATATATATGATATATATATATCATATATATATCATATATATGATATATATATCATATATATC	T	.	PASS	AC=2263;AF=0.451877;AFR_AF=0.326;AMR_AF=0.4856;AN=5008;CS=DEL_pindel;EAS_AF=0.5754;END=98982496;EUR_AF=0.501;NS=2504;SAS_AF=0.4202;SITEPOST=0.9922;SVTYPE=DEL	GT	1|0
3	99037445	DEL_pindel_8893	GGAAATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=4248;AF=0.848243;AFR_AF=0.8646;AMR_AF=0.8746;AN=5008;CS=DEL_pindel;EAS_AF=0.8472;END=99037757;EUR_AF=0.8539;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.8027;SITEPOST=0.9943;SVTYPE=DEL_ALU	GT	1|1
3	99605060	DEL_pindel_8906	TTTATCACTATGCTGAGTTCCTGGTGAGAGGGGAATGAGTGTAAAGCAGGGATG	T	.	PASS	AC=1049;AF=0.209465;AFR_AF=0.2534;AMR_AF=0.2032;AN=5008;CS=DEL_pindel;EAS_AF=0.1528;END=99605113;EUR_AF=0.1839;NS=2504;SAS_AF=0.2393;SITEPOST=0.9977;SVTYPE=DEL	GT	1|0
3	99628781	BI_GS_DEL1_B5_P0594_830	G	<CN0>	100	PASS	AC=1151;AF=0.229832;AFR_AF=0.084;AMR_AF=0.3429;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1954;END=99629631;EUR_AF=0.3032;MC=UW_VH_10390,UW_VH_6006,SI_BD_3380,UW_VH_4757,UW_VH_299,UW_VH_11401;NS=2504;SAS_AF=0.3067;SVTYPE=DEL	GT	1|1
3	99785350	DEL_pindel_8915	AGGCTTTGCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGT	A	.	PASS	AC=871;AF=0.173922;AFR_AF=0.1309;AMR_AF=0.2262;AN=5008;CS=DEL_pindel;EAS_AF=0.1488;END=99785656;EUR_AF=0.1918;MEINFO=AluY,19,281,-;NS=2504;SAS_AF=0.2025;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|0
3	101357527	BI_GS_DEL1_B3_P0596_16	C	<CN0>	100	PASS	AC=750;AF=0.14976;AFR_AF=0.1021;AMR_AF=0.0922;AN=5008;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.1538;END=101359730;EUR_AF=0.1431;MC=YL_CN_GWD_1049,YL_CN_CEU_910,SI_BD_3384,EM_DL_DEL65052,UW_VH_301,YL_CN_PUR_910;NS=2504;SAS_AF=0.2577;SVTYPE=DEL	GT	1|0
3	103453396	ALU_umary_ALU_2578	T	<INS:ME:ALU>	.	.	AC=1407;AF=0.28095;AFR_AF=0.1581;AMR_AF=0.3674;AN=5008;CS=ALU_umary;EAS_AF=0.1498;EUR_AF=0.5119;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2832;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GAGTAAAATTCTTTTT	GT	1|1
3	104278168	BI_GS_DEL1_B1_P0599_199	T	<CN0>	100	PASS	AC=1074;AF=0.214457;AFR_AF=0.1399;AMR_AF=0.2911;AN=5008;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0933;END=104279030;EUR_AF=0.4006;MC=DEL_pindel_8983;NS=2504;SAS_AF=0.1943;SVTYPE=DEL	GT	1|0
3	104645425	DEL_pindel_8986	GTTAAGATCATGAATAAATGAAAAATTGAAATGGAATTGGGGGCGATAAGCCCAAACTTAAAGGCAAAACTTCATATTTTCTGCTATCTACATAAAAGTGGTAAATCATCATTTCTAACTTTTGATTAACAGATTAACATGCACTAGTCTTTTAATAAATGCTGGTATTTTA	G	.	PASS	AC=440;AF=0.0878594;AFR_AF=0.003;AMR_AF=0.1585;AN=5008;CS=DEL_pindel;EAS_AF=0.2034;END=104645596;EUR_AF=0.0616;NS=2504;SAS_AF=0.0603;SITEPOST=0.9978;SVTYPE=DEL	GT	0|1
3	106813625	DEL_pindel_9010	AGTTTTTTTTTTTTCTTTTTTTTGTTGTTGTTTTTTTTGTTTTTTTTTTTGTTTTGTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGT	A	.	PASS	AC=4964;AF=0.991214;AFR_AF=0.9879;AMR_AF=0.9928;AN=5008;CS=DEL_pindel;EAS_AF=0.9891;END=106813789;EUR_AF=0.994;NS=2504;SAS_AF=0.9939;SITEPOST=1;SVTYPE=DEL	GT	1|1
3	110271029	ALU_umary_ALU_2610	A	<INS:ME:ALU>	.	.	AC=694;AF=0.138578;AFR_AF=0.2791;AMR_AF=0.0706;AN=5008;CS=ALU_umary;EAS_AF=0.0278;EUR_AF=0.1034;MEINFO=AluYa5,12,281,+;NS=2504;SAS_AF=0.1472;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AAAATTCTTTA	GT	0|1
3	111226375	ALU_umary_ALU_2616	A	<INS:ME:ALU>	.	.	AC=1806;AF=0.360623;AFR_AF=0.1467;AMR_AF=0.4553;AN=5008;CS=ALU_umary;EAS_AF=0.3879;EUR_AF=0.4791;MEINFO=AluYb11,1,276,+;NS=2504;SAS_AF=0.4325;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AAAAATAAAATCA	GT	1|0
3	111243593	BI_GS_CNV_3_111243593_111248855	T	<CN0>	100	PASS	AC=1085;AF=0.216653;AFR_AF=0.2867;AMR_AF=0.2478;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.0982;END=111248855;EUR_AF=0.2495;MC=UW_VH_21393,YL_CN_CHB_781,SI_BD_3449,EM_DL_DEL65479,UW_VH_1327;NS=2504;SAS_AF=0.1881;SVTYPE=DEL	GT	1|1
3	112466720	SVA_umary_SVA_179	T	<INS:ME:SVA>	.	.	AC=435;AF=0.086861;AFR_AF=0.1263;AMR_AF=0.0202;AN=5008;CS=SVA_umary;EAS_AF=0.1012;EUR_AF=0.0457;MEINFO=SVA,28,1627,-;NS=2504;SAS_AF=0.1084;SITEPOST=1;SVLEN=1599;SVTYPE=SVA;TSD=GAGGGAGAGACATATTTTTCTTCCTTTT	GT	0|1
3	112467382	DEL_pindel_9101	AGGGAAGGTAAATATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCGCTGTTTAGCCCAGGCCGGATTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	A	.	PASS	AC=3052;AF=0.609425;AFR_AF=0.593;AMR_AF=0.6239;AN=5008;CS=DEL_pindel;EAS_AF=0.6101;END=112467712;EUR_AF=0.6034;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.6268;SITEPOST=0.9789;SVTYPE=DEL_ALU	GT	0|1
3	113854021	DEL_pindel_9123	TGATATTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCGGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCGCGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=4518;AF=0.902157;AFR_AF=0.8525;AMR_AF=0.9164;AN=5008;CS=DEL_pindel;EAS_AF=0.9375;END=113854347;EUR_AF=0.9215;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.9029;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	1|1
3	114466474	DEL_pindel_9135	ACAAGATTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC	A	.	PASS	AC=3593;AF=0.717452;AFR_AF=0.6309;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.7371;END=114466798;EUR_AF=0.7525;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.7638;SITEPOST=0.9454;SVTYPE=DEL_ALU	GT	0|1
3	116204836	BI_GS_DEL1_B3_P0611_6	C	<CN0>	100	PASS	AC=1227;AF=0.245008;AFR_AF=0.1868;AMR_AF=0.1441;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.4454;END=116205180;EUR_AF=0.1998;MC=UW_VH_1395;NS=2504;SAS_AF=0.2352;SVTYPE=DEL	GT	1|1
3	116275271	DEL_pindel_9156	TAAAAAATCTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4568;AF=0.912141;AFR_AF=0.8684;AMR_AF=0.9265;AN=5008;CS=DEL_pindel;EAS_AF=0.9474;END=116275595;EUR_AF=0.9205;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.9162;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|1
3	118281607	BI_GS_DEL1_B5_P0613_350	G	<CN0>	100	PASS	AC=3447;AF=0.688299;AFR_AF=0.3525;AMR_AF=0.7709;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8373;END=118281829;EUR_AF=0.7913;MC=UW_VH_24779;NS=2504;SAS_AF=0.8241;SVTYPE=DEL	GT	1|1
3	119419835	BI_GS_DEL1_B4_P0614_99	G	<CN0>	100	PASS	AC=789;AF=0.157548;AFR_AF=0.1316;AMR_AF=0.2089;AN=5008;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0.1696;END=119420548;EUR_AF=0.1382;NS=2504;SAS_AF=0.1636;SVTYPE=DEL	GT	1|0
3	119419882	BI_GS_DEL1_B5_P0614_562	A	<CN0>	100	PASS	AC=917;AF=0.183107;AFR_AF=0.1672;AMR_AF=0.2392;AN=5008;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.1825;END=119420336;EUR_AF=0.1461;MC=UW_VH_1726;NS=2504;SAS_AF=0.2035;SVTYPE=DEL	GT	1|0
3	119893984	BI_GS_DEL1_B4_P0614_212	A	<CN0>	100	PASS	AC=4468;AF=0.892173;AFR_AF=0.8676;AMR_AF=0.9193;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9266;END=119894448;EUR_AF=0.9245;NS=2504;SAS_AF=0.8374;SVTYPE=DEL	GT	0|1
3	122138442	DEL_pindel_9246	TAGAAATGAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2191;AF=0.4375;AFR_AF=0.3419;AMR_AF=0.3775;AN=5008;CS=DEL_pindel;EAS_AF=0.5496;END=122138768;EUR_AF=0.493;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4366;SITEPOST=0.9961;SVTYPE=DEL_ALU	GT	0|1
3	123236746	DEL_pindel_9285	TAAAAATATTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4055;AF=0.809704;AFR_AF=0.6861;AMR_AF=0.8516;AN=5008;CS=DEL_pindel;EAS_AF=0.8829;END=123237061;EUR_AF=0.8469;MEINFO=AluYa5b1,1,281,+;NS=2504;SAS_AF=0.8333;SITEPOST=0.98305;SVTYPE=DEL_ALU	GT	1|1
3	124808631	ALU_umary_ALU_2685	C	<INS:ME:ALU>	.	.	AC=1873;AF=0.374002;AFR_AF=0.3495;AMR_AF=0.353;AN=5008;CS=ALU_umary;EAS_AF=0.4554;EUR_AF=0.3141;MEINFO=AluUndef,1,267,-;NS=2504;SAS_AF=0.3998;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=TC	GT	1|1
3	124936320	SI_BD_3505	T	<CN0>	100	PASS	AC=1776;AF=0.354633;AFR_AF=0.2958;AMR_AF=0.3833;AN=5008;CIEND=-170,322;CIPOS=-322,97;CS=DEL_union;EAS_AF=0.2708;END=124937213;EUR_AF=0.4473;MC=EM_DL_DEL10719024;NS=2504;SAS_AF=0.4049;SVTYPE=DEL	GT	1|1
3	125672301	BI_GS_DEL1_B4_P0620_120	T	<CN0>	100	PASS	AC=1185;AF=0.236621;AFR_AF=0.4909;AMR_AF=0.1686;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0833;END=125676371;EUR_AF=0.2078;MC=YL_CN_ASW_794,SI_BD_3512,EM_DL_DEL65846,YL_CN_LWK_739,UW_VH_1396;NS=2504;SAS_AF=0.1288;SVTYPE=DEL	GT	1|1
3	126090202	SVA_umary_SVA_182	T	<INS:ME:SVA>	.	.	AC=1635;AF=0.326478;AFR_AF=0.4032;AMR_AF=0.2522;AN=5008;CS=SVA_umary;EAS_AF=0.252;EUR_AF=0.3738;MEINFO=SVA,732,1627,+;NS=2504;SAS_AF=0.3037;SITEPOST=1;SVLEN=895;SVTYPE=SVA;TSD=AGAAGGAGCTGTCTT	GT	1|1
3	126358922	DEL_pindel_9329	AGCTGCTTGTGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2952;AF=0.589457;AFR_AF=0.5144;AMR_AF=0.6873;AN=5008;CS=DEL_pindel;EAS_AF=0.5427;END=126359249;EUR_AF=0.6889;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.5675;SITEPOST=0.9888;SVTYPE=DEL_ALU	GT	1|1
3	128672140	YL_CN_PJL_793	C	<CN0>	100	PASS	AC=3863;AF=0.771366;AFR_AF=0.826;AMR_AF=0.7622;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8433;END=128675334;EUR_AF=0.7078;NS=2504;SAS_AF=0.6953;SVTYPE=DEL	GT	1|1
3	129938434	ALU_umary_ALU_2701	C	<INS:ME:ALU>	.	.	AC=3577;AF=0.714257;AFR_AF=0.6225;AMR_AF=0.7651;AN=5008;CS=ALU_umary;EAS_AF=0.754;EUR_AF=0.7565;MEINFO=AluUndef,1,277,+;NS=2504;SAS_AF=0.7178;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAATAAAGAATGAATGGGAGC	GT	1|1
3	131708252	UW_VH_2783	C	<CN0>	100	PASS	AC=1384;AF=0.276358;AFR_AF=0.028;AMR_AF=0.4452;AN=5008;CIEND=0,383;CIPOS=-398,0;CS=DEL_union;EAS_AF=0.3512;END=131713384;EUR_AF=0.333;MC=UW_VH_315,EM_DL_DEL66330,YL_CN_IBS_657,BI_GS_DEL1_B1_P0626_731;NS=2504;SAS_AF=0.3569;SVTYPE=DEL	GT	0|1
3	131989128	DUP_gs_CNV_3_131989128_131994876	T	<CN0>,<CN2>	.	PASS	AC=1161,1;AF=0.231829,0.00019968;AFR_AF=0.1241,0.0008;AMR_AF=0.3602,0;AN=5008;CS=DUP_gs;EAS_AF=0.2569,0;END=131994876;EUR_AF=0.2704,0;MC=EM_DL_DEL66527,BI_GS_DEL1_B4_P0626_238,UW_VH_9903,UW_VH_14285,UW_VH_21178,UW_VH_316,UW_VH_15716,YL_CN_GIH_579,SI_BD_3556,UW_VH_4238;NS=2504;SAS_AF=0.2209,0;SITEPOST=1;SVTYPE=CNV	GT	0|1
3	134673902	DEL_pindel_9520	TGACATCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTAATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCAACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGG	T	.	PASS	AC=2066;AF=0.41254;AFR_AF=0.5318;AMR_AF=0.4813;AN=5008;CS=DEL_pindel;EAS_AF=0.2024;END=134674555;EUR_AF=0.3926;NS=2504;SAS_AF=0.4397;SITEPOST=0.9972;SVTYPE=DEL	GT	1|0
3	139425868	DEL_pindel_9603	GAGAGAGGACGCAGACAAGAGTTTTGGGAAGATTTCTGACATCTGTGAGGGGAAGGCTT	G	.	PASS	AC=1231;AF=0.245807;AFR_AF=0.0908;AMR_AF=0.2839;AN=5008;CS=DEL_pindel;EAS_AF=0.378;END=139425926;EUR_AF=0.2266;NS=2504;SAS_AF=0.3119;SITEPOST=0.9975;SVTYPE=DEL	GT	0|1
3	144687884	ALU_umary_ALU_2769	T	<INS:ME:ALU>	.	.	AC=1968;AF=0.392971;AFR_AF=0.3805;AMR_AF=0.415;AN=5008;CS=ALU_umary;EAS_AF=0.3879;EUR_AF=0.4364;MEINFO=AluYc1,20,281,-;NS=2504;SAS_AF=0.3548;SITEPOST=1;SVLEN=261;SVTYPE=ALU;TSD=TGGTTTGTAATTTATT	GT	1|0
3	144693110	DEL_pindel_9705	CTGGAAGGCGGTTGATTAGGCCTGGTTAGAACCCTTCACTAAGCTGCTAAGAATGGGTACTGGGACTGAGAGCTTATGCTAAGCACTTTGGGCCAGGCATTTCAAATCTTTTGATGAGCTCTTGAGG	C	.	PASS	AC=2971;AF=0.593251;AFR_AF=0.5734;AMR_AF=0.6657;AN=5008;CS=DEL_pindel;EAS_AF=0.5675;END=144693236;EUR_AF=0.668;NS=2504;SAS_AF=0.5184;SITEPOST=0.9999;SVTYPE=DEL	GT	1|1
3	144888422	BI_GS_DEL1_B2_P0639_601	G	<CN0>	100	PASS	AC=1246;AF=0.248802;AFR_AF=0.1021;AMR_AF=0.3646;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1657;END=144888910;EUR_AF=0.4453;NS=2504;SAS_AF=0.2485;SVTYPE=DEL	GT	0|1
3	145069463	ALU_umary_ALU_2770	T	<INS:ME:ALU>	.	.	AC=400;AF=0.0798722;AFR_AF=0.0605;AMR_AF=0.0634;AN=5008;CS=ALU_umary;EAS_AF=0.1161;EUR_AF=0.1024;MEINFO=AluUndef,13,281,-;NS=2504;SAS_AF=0.0573;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAAAATAATGTCACTGT	GT	1|0
3	146385228	EM_DL_DEL66886	T	<CN0>	100	PASS	AC=3504;AF=0.699681;AFR_AF=0.8457;AMR_AF=0.6988;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.503;END=146390409;EUR_AF=0.673;MC=YL_CN_MXL_645,YL_CN_CEU_952;NS=2504;SAS_AF=0.7331;SVTYPE=DEL	GT	1|0
3	148566792	DEL_pindel_9765	TAGACCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCGCTTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCACCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=4354;AF=0.869409;AFR_AF=0.8903;AMR_AF=0.8501;AN=5008;CS=DEL_pindel;EAS_AF=0.8433;END=148567110;EUR_AF=0.8857;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.865;SITEPOST=0.9849;SVTYPE=DEL_ALU	GT	1|1
3	148844372	DEL_pindel_9771	TAAGATGCAAAAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3377;AF=0.674321;AFR_AF=0.7844;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.5942;END=148844700;EUR_AF=0.6581;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.6033;SITEPOST=0.98225;SVTYPE=DEL_ALU	GT	1|1
3	151503209	DEL_pindel_9823	AATACATATACATATACATATACATATACATATACATATACATATACATATACATATACAT	A	.	PASS	AC=1281;AF=0.255791;AFR_AF=0.32;AMR_AF=0.2464;AN=5008;CS=DEL_pindel;EAS_AF=0.2202;END=151503269;EUR_AF=0.2227;NS=2504;SAS_AF=0.2464;SITEPOST=0.9997;SVTYPE=DEL	GT	0|1
3	151748850	ALU_umary_ALU_2810	G	<INS:ME:ALU>	.	.	AC=1074;AF=0.214457;AFR_AF=0.1755;AMR_AF=0.1801;AN=5008;CS=ALU_umary;EAS_AF=0.2907;EUR_AF=0.2614;MEINFO=AluYi6,1,280,+;NS=2504;SAS_AF=0.1646;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGAATAGCTTAACATG	GT	1|0
3	152053972	ALU_umary_ALU_2814	G	<INS:ME:ALU>	.	.	AC=158;AF=0.0315495;AFR_AF=0.0068;AMR_AF=0.0504;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0845;MEINFO=AluYa5,72,281,+;NS=2504;SAS_AF=0.0286;SITEPOST=1;SVLEN=209;SVTYPE=ALU;TSD=AAAAATGTAATCTG	GT	1|0
3	156092162	UW_VH_10429	A	<CN0>	100	PASS	AC=1204;AF=0.240415;AFR_AF=0.5492;AMR_AF=0.1398;AN=5008;CIEND=0,455;CIPOS=-471,0;CS=DEL_union;EAS_AF=0.0486;END=156093688;EUR_AF=0.1829;MC=EM_DL_DEL10730943,UW_VH_2025,BI_GS_DEL1_B5_P0651_142,YL_CN_IBS_675,UW_VH_6652,YL_CN_GWD_1109;NS=2504;SAS_AF=0.1513;SVTYPE=DEL	GT	0|1
3	158350719	BI_GS_DEL1_B5_P0653_351	T	<CN0>	100	PASS	AC=1803;AF=0.360024;AFR_AF=0.23;AMR_AF=0.3876;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.6151;END=158351910;EUR_AF=0.33;MC=YL_CN_GIH_595,YL_CN_KHV_831,YL_CN_ACB_901,YL_CN_STU_786,YL_CN_JPT_865,YL_CN_IBS_676,YL_CN_GWD_1110,SI_BD_3664,EM_DL_DEL10731763,YL_CN_CHS_793;NS=2504;SAS_AF=0.2843;SVTYPE=DEL	GT	1|1
3	159257018	BI_GS_DEL1_B5_P0654_313	A	<CN0>	100	PASS	AC=1259;AF=0.251398;AFR_AF=0.1097;AMR_AF=0.2478;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4167;END=159257691;EUR_AF=0.2803;MC=UW_VH_327;NS=2504;SAS_AF=0.2454;SVTYPE=DEL	GT	1|0
3	159428985	DEL_pindel_9982	TAAGAAATTTAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1373;AF=0.274161;AFR_AF=0.4917;AMR_AF=0.2767;AN=5008;CS=DEL_pindel;EAS_AF=0.2014;END=159429184;EUR_AF=0.1362;MEINFO=AluY,119,281,+;NS=2504;SAS_AF=0.1953;SITEPOST=0.9977;SVTYPE=DEL_ALU	GT	1|0
3	161246712	DEL_pindel_10014	CAGAATGTGTCATTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2356;AF=0.470447;AFR_AF=0.5416;AMR_AF=0.4222;AN=5008;CS=DEL_pindel;EAS_AF=0.3452;END=161247047;EUR_AF=0.4423;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5665;SITEPOST=0.9968;SVTYPE=DEL_ALU	GT	1|0
3	162408296	DEL_pindel_10042	CTATGTTTCTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGCGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTGTGTTTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	C	.	PASS	AC=3576;AF=0.714058;AFR_AF=0.7481;AMR_AF=0.7061;AN=5008;CS=DEL_pindel;EAS_AF=0.7341;END=162408612;EUR_AF=0.673;MEINFO=AluYf1,1,281,-;NS=2504;SAS_AF=0.6953;SITEPOST=0.9463;SVTYPE=DEL_ALU	GT	1|1
3	162512202	BI_GS_CNV_3_162512202_162525833	G	<CN0>	100	PASS	AC=2532;AF=0.505591;AFR_AF=0.5287;AMR_AF=0.4409;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.8929;END=162525833;EUR_AF=0.2843;MC=UW_VH_3184,UW_VH_13729,SI_BD_3678,EM_DL_DEL67207,BI_GS_DEL2_B1_P0132_1,YL_CN_MSL_719;NS=2504;SAS_AF=0.3487;SVTYPE=DEL	GT	1|1
3	162514471	DUP_uwash_chr3_162514470_162625647	T	<CN0>	.	PASS	AC=2532;AF=0.505591;AFR_AF=0.5287;AMR_AF=0.4409;AN=5008;CS=DUP_uwash;EAS_AF=0.8929;END=162625647;EUR_AF=0.2843;NS=2504;SAS_AF=0.3487;SITEPOST=1;SVTYPE=DEL	GT	1|1
3	162525834	BI_GS_CNV_3_162525834_162545193	T	<CN0>	100	PASS	AC=3623;AF=0.723442;AFR_AF=0.6021;AMR_AF=0.7378;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.9226;END=162545193;EUR_AF=0.6869;NS=2504;SAS_AF=0.7096;SVTYPE=DEL	GT	1|1
3	162558858	BI_GS_CNV_3_162558858_162601552	C	<CN0>	100	PASS	AC=2532;AF=0.505591;AFR_AF=0.5287;AMR_AF=0.4409;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.8929;END=162601552;EUR_AF=0.2843;MC=UW_VH_3184,UW_VH_13729,SI_BD_3678,EM_DL_DEL67207,BI_GS_DEL2_B1_P0132_1,YL_CN_MSL_719;NS=2504;SAS_AF=0.3487;SVTYPE=DEL	GT	1|1
3	162764905	UW_VH_2550	T	<CN0>	100	PASS	AC=4173;AF=0.833267;AFR_AF=0.7769;AMR_AF=0.8372;AN=5008;CIEND=0,607;CIPOS=-515,0;CS=DEL_union;EAS_AF=0.9812;END=162769085;EUR_AF=0.7296;MC=SI_BD_3679,EM_DL_DEL67212,YL_CN_MSL_722;NS=2504;SAS_AF=0.8609;SVTYPE=DEL	GT	1|1
3	163464167	DEL_pindel_10072	AGCATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=4184;AF=0.835463;AFR_AF=0.8691;AMR_AF=0.8386;AN=5008;CS=DEL_pindel;EAS_AF=0.7788;END=163464473;EUR_AF=0.8191;MEINFO=AluYc2,1,281,-;NS=2504;SAS_AF=0.863;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	0|1
3	166362314	ALU_umary_ALU_2890	G	<INS:ME:ALU>	.	.	AC=1578;AF=0.315096;AFR_AF=0.531;AMR_AF=0.232;AN=5008;CS=ALU_umary;EAS_AF=0.1935;EUR_AF=0.3022;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.2209;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAGGGGG	GT	0|1
3	168199075	ALU_umary_ALU_2905	T	<INS:ME:ALU>	.	.	AC=507;AF=0.101238;AFR_AF=0.0598;AMR_AF=0.2147;AN=5008;CS=ALU_umary;EAS_AF=0.1399;EUR_AF=0.0736;MEINFO=AluYa5,3,281,-;NS=2504;SAS_AF=0.0654;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=CATGCCTGACTCT	GT	0|1
3	168738458	BI_GS_DEL1_B5_P0663_823	A	<CN0>	100	PASS	AC=1563;AF=0.312101;AFR_AF=0.1664;AMR_AF=0.353;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2808;END=168738838;EUR_AF=0.5169;MC=DEL_pindel_10164,UW_VH_329;NS=2504;SAS_AF=0.3016;SVTYPE=DEL	GT	1|1
3	169474323	ALU_umary_ALU_2913	G	<INS:ME:ALU>	.	.	AC=892;AF=0.178115;AFR_AF=0.0204;AMR_AF=0.1585;AN=5008;CS=ALU_umary;EAS_AF=0.3125;EUR_AF=0.2555;MEINFO=AluUndef,1,275,+;NS=2504;SAS_AF=0.1871;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAGACTTGAGG	GT	1|1
3	173268419	DEL_pindel_10240	TAACCTGCAATGTCTTTTTGAGACCATTAGACAGCTACTTACTGAAGTTAATTTTACTA	T	.	PASS	AC=1520;AF=0.303514;AFR_AF=0.3313;AMR_AF=0.2493;AN=5008;CS=DEL_pindel;EAS_AF=0.374;END=173268477;EUR_AF=0.2256;NS=2504;SAS_AF=0.3119;SITEPOST=0.9966;SVTYPE=DEL	GT	1|0
3	177381336	SI_BD_3759	C	<CN0>	100	PASS	AC=411;AF=0.0820687;AFR_AF=0.143;AMR_AF=0.0865;AN=5008;CIEND=-50,204;CIPOS=-204,50;CS=DEL_union;EAS_AF=0.002;END=177385447;EUR_AF=0.1143;MC=BI_GS_DEL1_B2_P0672_236,YL_CN_ITU_806,UW_VH_2732;NS=2504;SAS_AF=0.046;SVTYPE=DEL	GT	1|0
3	177896496	DEL_pindel_10305	TTAACACATAACAGAAAAATAAATACTGCATGATCTCACTTGTAAGTGGGAGCTAAACA	T	.	PASS	AC=2381;AF=0.475439;AFR_AF=0.5333;AMR_AF=0.5303;AN=5008;CS=DEL_pindel;EAS_AF=0.2798;END=177896554;EUR_AF=0.5358;NS=2504;SAS_AF=0.498;SITEPOST=0.9997;SVTYPE=DEL	GT	1|1
3	178550124	SI_BD_3769	A	<CN0>	100	PASS	AC=2916;AF=0.582268;AFR_AF=0.9289;AMR_AF=0.5231;AN=5008;CIEND=-55,307;CIPOS=-307,58;CS=DEL_union;EAS_AF=0.2232;END=178550897;EUR_AF=0.5825;MC=DEL_pindel_10313;NS=2504;SAS_AF=0.5256;SVTYPE=DEL	GT	1|1
3	178567629	BI_GS_DEL1_B5_P0673_746	A	<CN0>	100	PASS	AC=619;AF=0.123602;AFR_AF=0.0598;AMR_AF=0.1427;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0377;END=178568339;EUR_AF=0.2744;MC=UW_VH_2198,DEL_pindel_10314;NS=2504;SAS_AF=0.1299;SVTYPE=DEL	GT	1|0
3	179654342	BI_GS_DEL1_B5_P0674_770	T	<CN0>	100	PASS	AC=2672;AF=0.533546;AFR_AF=0.5499;AMR_AF=0.4597;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6478;END=179654808;EUR_AF=0.502;MC=UW_VH_332,DEL_pindel_10331;NS=2504;SAS_AF=0.4785;SVTYPE=DEL	GT	0|1
3	180091672	L1_umary_LINE1_758	G	<INS:ME:LINE1>	.	.	AC=1332;AF=0.265974;AFR_AF=0.1906;AMR_AF=0.3156;AN=5008;CS=L1_umary;EAS_AF=0.3571;EUR_AF=0.1909;MEINFO=LINE1,5556,5853,+;NS=2504;SAS_AF=0.316;SITEPOST=1;SVLEN=297;SVTYPE=LINE1;TSD=null	GT	1|1
3	183876797	BI_GS_DEL1_B2_P0678_532	C	<CN0>	100	PASS	AC=2572;AF=0.513578;AFR_AF=0.5545;AMR_AF=0.3689;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5367;END=183877385;EUR_AF=0.4742;MC=UW_VH_10;NS=2504;SAS_AF=0.5777;SVTYPE=DEL	GT	0|1
3	185017328	DEL_pindel_10410	TCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2955;AF=0.590056;AFR_AF=0.5295;AMR_AF=0.5865;AN=5008;CS=DEL_pindel;EAS_AF=0.6022;END=185017653;EUR_AF=0.669;MEINFO=AluYb5,1,281,-;NS=2504;SAS_AF=0.5808;SITEPOST=0.9952;SVTYPE=DEL_ALU	GT	1|0
3	186826655	DEL_pindel_10452	TAAAATTTGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2671;AF=0.533347;AFR_AF=0.5998;AMR_AF=0.4625;AN=5008;CS=DEL_pindel;EAS_AF=0.5486;END=186826969;EUR_AF=0.4195;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.5951;SITEPOST=0.996;SVTYPE=DEL_ALU	GT	1|1
3	188304831	DEL_pindel_10478	TAAAGAAAGTTGGCGCTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3760;AF=0.750799;AFR_AF=0.7148;AMR_AF=0.8069;AN=5008;CS=DEL_pindel;EAS_AF=0.753;END=188305164;EUR_AF=0.7903;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7168;SITEPOST=0.9648;SVTYPE=DEL_ALU	GT	0|1
3	189575894	DEL_pindel_10497	TAAGAAAATGTTGTGTATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2524;AF=0.503994;AFR_AF=0.5454;AMR_AF=0.4409;AN=5008;CS=DEL_pindel;EAS_AF=0.4643;END=189576216;EUR_AF=0.5318;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.5051;SITEPOST=0.9986;SVTYPE=DEL_ALU	GT	1|0
3	189737175	YL_CN_CHS_825	A	<CN0>	100	PASS	AC=1515;AF=0.302516;AFR_AF=0.1717;AMR_AF=0.2954;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4216;END=189740648;EUR_AF=0.3052;MC=UW_VH_9400,UW_VH_5690,UW_VH_13324,EM_DL_DEL68016,UW_VH_4879,UW_VH_25412,BI_GS_DEL1_B1_P0684_661,UW_VH_1403,UW_VH_3044,UW_VH_12512;NS=2504;SAS_AF=0.3589;SVTYPE=DEL	GT	0|1
3	189955408	DEL_pindel_10508	ACCTGTGTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=1544;AF=0.308307;AFR_AF=0.3896;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.3988;END=189955709;EUR_AF=0.2465;MEINFO=AluYa4_3,2,281,-;NS=2504;SAS_AF=0.1667;SITEPOST=0.9992;SVTYPE=DEL_ALU	GT	0|1
3	190290639	DEL_pindel_10515	TAATGCTTTGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTTCTGGGATTACAGGCGTGAG	T	.	PASS	AC=1621;AF=0.323682;AFR_AF=0.4244;AMR_AF=0.3501;AN=5008;CS=DEL_pindel;EAS_AF=0.1151;END=190290936;EUR_AF=0.4066;MEINFO=AluY,16,281,-;NS=2504;SAS_AF=0.2986;SITEPOST=0.9996;SVTYPE=DEL_ALU	GT	0|1
3	190478458	DEL_pindel_10518	TGCTATGGTATAAAGTCATGGTGTTAGCAGGGCTGATTCTCTCTGAAGGTTCTGGAAAAGAATTGATTTCCTTGGATTTCCTGCTCTTAGAGGCTATCTGAATACATTGACTAGTGACTCCTTCCTCCATCAAAAACGTGTAATTTCGTTCTCTGATTTCATCATTACATGGCCTTC	T	.	PASS	AC=2843;AF=0.567692;AFR_AF=0.5582;AMR_AF=0.5101;AN=5008;CS=DEL_pindel;EAS_AF=0.6339;END=190478634;EUR_AF=0.4533;NS=2504;SAS_AF=0.6708;SITEPOST=0.9998;SVTYPE=DEL	GT	1|1
3	190999464	ALU_umary_ALU_3022	C	<INS:ME:ALU>	.	.	AC=1740;AF=0.347444;AFR_AF=0.1437;AMR_AF=0.4121;AN=5008;CS=ALU_umary;EAS_AF=0.4107;EUR_AF=0.4692;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3865;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGTACTCTATTTTC	GT	1|0
3	191064690	UW_VH_339	C	<CN0>	100	PASS	AC=695;AF=0.138778;AFR_AF=0.0991;AMR_AF=0.2493;AN=5008;CIEND=0,378;CIPOS=-396,0;CS=DEL_union;EAS_AF=0;END=191071659;EUR_AF=0.2584;MC=BI_GS_DEL1_B2_P0686_44,UW_VH_4801,SI_BD_3848,EM_DL_DEL68031,YL_CN_ACB_935;NS=2504;SAS_AF=0.1339;SVTYPE=DEL	GT	1|0
3	191856085	DEL_pindel_10540	TGAAAACCTTTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3019;AF=0.602835;AFR_AF=0.466;AMR_AF=0.6484;AN=5008;CS=DEL_pindel;EAS_AF=0.6131;END=191856423;EUR_AF=0.7008;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6442;SITEPOST=0.9929;SVTYPE=DEL_ALU	GT	0|1
3	191889929	UW_VH_1733	G	<CN0>	100	PASS	AC=170;AF=0.0339457;AFR_AF=0.0083;AMR_AF=0.0504;AN=5008;CIEND=0,370;CIPOS=-332,0;CS=DEL_union;EAS_AF=0.0317;END=191891307;EUR_AF=0.0517;MC=EM_DL_DEL10745257,BI_GS_DEL1_B3_P0686_49,YL_CN_FIN_795;NS=2504;SAS_AF=0.0409;SVTYPE=DEL	GT	0|1
3	192045380	ALU_umary_ALU_3031	C	<INS:ME:ALU>	.	.	AC=677;AF=0.135184;AFR_AF=0.0915;AMR_AF=0.1326;AN=5008;CS=ALU_umary;EAS_AF=0.1885;EUR_AF=0.1004;MEINFO=AluUndef,3,281,+;NS=2504;SAS_AF=0.1769;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=null	GT	1|0
3	192875329	EM_DL_DEL68191	T	<CN0>	100	PASS	AC=3467;AF=0.692292;AFR_AF=0.5076;AMR_AF=0.6931;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.9038;END=192885405;EUR_AF=0.6789;MC=BI_GS_CNV_3_192875322_192885392,UW_VH_2173,UW_VH_5913,UW_VH_13886,UW_VH_18813,UW_VH_11681,UW_VH_17262,YL_CN_MSL_746,SI_BD_3867,UW_VH_11187,UW_VH_11816,UW_VH_7429,UW_VH_11716;NS=2504;SAS_AF=0.7372;SVTYPE=DEL	GT	1|0
3	194398762	UW_VH_25088	C	<CN0>	100	PASS	AC=3360;AF=0.670927;AFR_AF=0.4576;AMR_AF=0.647;AN=5008;CIEND=0,470;CIPOS=-376,0;CS=DEL_union;EAS_AF=0.877;END=194400296;EUR_AF=0.7048;MC=YL_CN_GIH_622,YL_CN_JPT_907,YL_CN_TSI_775,UW_VH_15441,SI_BD_3877,UW_VH_16802,YL_CN_BEB_686,YL_CN_GWD_1166,YL_CN_STU_829,YL_CN_PJL_858,YL_CN_CEU_1010,YL_CN_KHV_863,UW_VH_2782,UW_VH_18993,UW_VH_19972,YL_CN_LWK_814,UW_VH_18380,YL_CN_ITU_826,YL_CN_YRI_1079,YL_CN_PEL_749,EM_DL_DEL10746451,YL_CN_ACB_942;NS=2504;SAS_AF=0.729;SVTYPE=DEL	GT	0|1
3	195417835	DUP_gs_CNV_3_195417835_195445776	G	<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=1906,1286,56,19;AF=0.380591,0.256789,0.0111821,0.00379393;AFR_AF=0.4682,0.115,0.0129,0.003;AMR_AF=0.3833,0.2839,0.013,0.0101;AN=5008;CS=DUP_gs;EAS_AF=0.3502,0.4246,0.0188,0.004;END=195445776;EUR_AF=0.3241,0.2674,0.007,0.001;NS=2504;SAS_AF=0.3497,0.2454,0.0041,0.0031;SITEPOST=0.9954;SVTYPE=CNV	GT	1|1
3	195452012	DUP_gs_CNV_3_195452012_195457240	T	<CN2>,<CN3>,<CN4>	.	PASS	AC=2618,32,6;AF=0.522764,0.00638978,0.00119808;AFR_AF=0.4894,0.0159,0.003;AMR_AF=0.5447,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.6687,0.0069,0;END=195457240;EUR_AF=0.4443,0.002,0;NS=2504;SAS_AF=0.4826,0.001,0.001;SITEPOST=0.9955;SVTYPE=CNV	GT	1|1
3	195457317	UW_VH_6811	C	<CN0>	100	PASS	AC=625;AF=0.1248;AFR_AF=0.0265;AMR_AF=0.0951;AN=5008;CIEND=0,350;CIPOS=-381,0;CS=DEL_union;EAS_AF=0.3095;END=195471062;EUR_AF=0.0656;MC=YL_CN_JPT_922;NS=2504;SAS_AF=0.1493;SVTYPE=DEL	GT	0|1
3	195505831	SI_BD_3904	G	<CN0>	100	PASS	AC=2874;AF=0.573882;AFR_AF=0.5378;AMR_AF=0.5029;AN=5008;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.7361;END=195507123;EUR_AF=0.5944;NS=2504;SAS_AF=0.4847;SVTYPE=DEL	GT	1|0
3	195569206	BI_GS_DEL1_B3_P0690_30	T	<CN0>	100	PASS	AC=2223;AF=0.44389;AFR_AF=0.2837;AMR_AF=0.5086;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.7728;END=195569923;EUR_AF=0.2753;MC=UW_VH_1735,SI_BD_3912;NS=2504;SAS_AF=0.4489;SVTYPE=DEL	GT	0|1
3	195680898	DUP_gs_CNV_3_195680898_195693668	C	<CN0>,<CN2>	.	PASS	AC=49,241;AF=0.00978435,0.048123;AFR_AF=0.0023,0.1437;AMR_AF=0.0259,0.0245;AN=5008;CS=DUP_gs;EAS_AF=0.0119,0.004;END=195693668;EUR_AF=0.005,0.0179;NS=2504;SAS_AF=0.0112,0.0123;SITEPOST=0.99535;SVTYPE=CNV	GT	1|0
3	195773919	BI_GS_DEL1_B1_P0690_450	G	<CN0>	100	PASS	AC=1021;AF=0.203874;AFR_AF=0.0393;AMR_AF=0.2176;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.619;END=195774981;EUR_AF=0.0457;MC=SI_BD_3920,UW_VH_23249,EM_DL_DEL10747714,UW_VH_6453,UW_VH_13701,UW_VH_19149,UW_VH_11376,UW_VH_54;NS=2504;SAS_AF=0.1513;SVTYPE=DEL	GT	1|0
3	196055919	SI_BD_3925	A	<CN0>	100	PASS	AC=2159;AF=0.43111;AFR_AF=0.1967;AMR_AF=0.4597;AN=5008;CIEND=-130,270;CIPOS=-270,161;CS=DEL_union;EAS_AF=0.7897;END=196056883;EUR_AF=0.3757;MC=BI_GS_DEL1_B1_P0691_38,EM_DL_DEL10747824;NS=2504;SAS_AF=0.4151;SVTYPE=DEL	GT	0|1
4	401039	DEL_pindel_10693	TAAGAATAAGGCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGACGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1560;AF=0.311502;AFR_AF=0.4153;AMR_AF=0.2478;AN=5008;CS=DEL_pindel;EAS_AF=0.245;END=401369;EUR_AF=0.2873;MEINFO=AluYb3a1,1,281,+;NS=2504;SAS_AF=0.3098;SITEPOST=0.9926;SVTYPE=DEL_ALU	GT	1|0
4	6651592	BI_GS_DEL1_B5_P0700_714	G	<CN0>	100	PASS	AC=2171;AF=0.433506;AFR_AF=0.0877;AMR_AF=0.5836;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5417;END=6652912;EUR_AF=0.6173;MC=YL_CN_CLM_749,YL_CN_MXL_744,YL_CN_TSI_821,YL_CN_GIH_656,YL_CN_STU_873,YL_CN_CHB_912,EM_DL_DEL10753565,YL_CN_GBR_845,YL_CN_KHV_920,YL_CN_CHS_898,YL_CN_CDX_771,YL_CN_BEB_726,YL_CN_JPT_964,UW_VH_346;NS=2504;SAS_AF=0.4939;SVTYPE=DEL	GT	0|1
4	6897351	EM_DL_DEL68726	C	<CN0>	100	PASS	AC=2487;AF=0.496605;AFR_AF=0.5885;AMR_AF=0.5245;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.37;END=6900401;EUR_AF=0.4831;MC=YL_CN_GIH_659,UW_VH_347,SI_BD_4043,UW_VH_12565,BI_GS_DEL1_B2_P0700_799;NS=2504;SAS_AF=0.4969;SVTYPE=DEL	GT	1|0
4	7569173	ALU_umary_ALU_3077	T	<INS:ME:ALU>	.	.	AC=295;AF=0.0589058;AFR_AF=0.1452;AMR_AF=0.0418;AN=5008;CS=ALU_umary;EAS_AF=0.0069;EUR_AF=0.0318;MEINFO=AluYc1,3,281,-;NS=2504;SAS_AF=0.0358;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=CTGGTCAGGTGTTTTTT	GT	1|0
4	7635491	BI_GS_DEL1_B5_P0701_650	T	<CN0>	100	PASS	AC=2200;AF=0.439297;AFR_AF=0.1354;AMR_AF=0.4524;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.745;END=7635854;EUR_AF=0.4294;MC=UW_VH_24981,DEL_pindel_10930;NS=2504;SAS_AF=0.5358;SVTYPE=DEL	GT	0|1
4	7750915	ALU_umary_ALU_3078	A	<INS:ME:ALU>	.	.	AC=3;AF=0.00059904;AFR_AF=0.0008;AMR_AF=0;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.001;MEINFO=AluUndef,1,206,-;NS=2504;SAS_AF=0.001;SITEPOST=1;SVLEN=205;SVTYPE=ALU;TSD=null	GT	0|1
4	9157568	YL_CN_PEL_803	T	<CN0>	100	PASS	AC=4492;AF=0.896965;AFR_AF=0.9599;AMR_AF=0.8602;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8621;END=9214307;EUR_AF=0.9235;MC=SI_BD_4069,BI_GS_DEL1_B1_P0703_87,BI_GS_DEL1_B1_P0703_86;NS=2504;SAS_AF=0.8466;SVTYPE=DEL	GT	1|1
4	9186956	BI_GS_CNV_4_9186956_9206735	A	<CN0>	100	PASS	AC=4525;AF=0.903554;AFR_AF=0.9599;AMR_AF=0.8602;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.8948;END=9206735;EUR_AF=0.9235;NS=2504;SAS_AF=0.8466;SVTYPE=DEL	GT	1|1
4	9457406	DUP_gs_CNV_4_9457406_9481022	A	<CN0>,<CN2>	.	PASS	AC=2872,34;AF=0.573482,0.00678914;AFR_AF=0.3699,0.0242;AMR_AF=0.7075,0;AN=5008;CS=DUP_gs;EAS_AF=0.5635,0.001;END=9481022;EUR_AF=0.7555,0.001;MC=YL_CN_ASW_928;NS=2504;SAS_AF=0.5767,0;SITEPOST=1;SVTYPE=CNV	GT	0|1
4	9573062	DEL_pindel_11006	GAAGACACTATTTGAAAAGGATACTTTTGCACACATGTTTACAGCAGCAAACTTCACAGTTGCAAAACTATAGAACCAGCCCATATGCCCATCAATCAATTAGTGGATA	G	.	PASS	AC=3307;AF=0.660343;AFR_AF=0.6301;AMR_AF=0.7118;AN=5008;CS=DEL_pindel;EAS_AF=0.5615;END=9573170;EUR_AF=0.839;NS=2504;SAS_AF=0.5828;SITEPOST=0.9947;SVTYPE=DEL	GT	1|1
4	9576978	BI_GS_DEL1_B1_P0703_208	T	<CN0>	100	PASS	AC=2100;AF=0.419329;AFR_AF=0.0915;AMR_AF=0.5086;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4444;END=9577452;EUR_AF=0.6938;NS=2504;SAS_AF=0.4908;SVTYPE=DEL	GT	0|1
4	9603244	SVA_umary_SVA_205	C	<INS:ME:SVA>	.	.	AC=1685;AF=0.336462;AFR_AF=0.2837;AMR_AF=0.3213;AN=5008;CS=SVA_umary;EAS_AF=0.3284;EUR_AF=0.4702;MEINFO=SVA,1274,1542,-;NS=2504;SAS_AF=0.2894;SITEPOST=1;SVLEN=268;SVTYPE=SVA;TSD=AAGTTC	GT	1|1
4	9704849	SVA_umary_SVA_206	A	<INS:ME:SVA>	.	.	AC=1555;AF=0.310503;AFR_AF=0.1241;AMR_AF=0.3718;AN=5008;CS=SVA_umary;EAS_AF=0.3194;EUR_AF=0.494;MEINFO=SVA,150,1603,+;NS=2504;SAS_AF=0.3211;SITEPOST=1;SVLEN=1453;SVTYPE=SVA;TSD=AAGAAAATCACCATAAATCAGA	GT	0|1
4	10211223	SI_BD_4077	T	<CN0>	100	PASS	AC=3093;AF=0.617612;AFR_AF=0.5643;AMR_AF=0.6311;AN=5008;CIEND=-50,324;CIPOS=-324,57;CS=DEL_union;EAS_AF=0.5556;END=10234580;EUR_AF=0.6561;MC=UW_VH_5584,UW_VH_4758,UW_VH_1976,UW_VH_11138,UW_VH_5213,UW_VH_12331,UW_VH_11745,YL_CN_MXL_757,UW_VH_21179,UW_VH_24950,UW_VH_2551,UW_VH_19890,EM_DL_DEL68929,UW_VH_11377,UW_VH_16406,BI_GS_CNV_4_10211082_10229383,UW_VH_4553,UW_VH_18839,UW_VH_17745;NS=2504;SAS_AF=0.7045;SVTYPE=DEL	GT	0|1
4	12239264	ALU_umary_ALU_3090	A	<INS:ME:ALU>	.	.	AC=1280;AF=0.255591;AFR_AF=0.2133;AMR_AF=0.2853;AN=5008;CS=ALU_umary;EAS_AF=0.2192;EUR_AF=0.3082;MEINFO=AluUndef,181,281,-;NS=2504;SAS_AF=0.2751;SITEPOST=1;SVLEN=100;SVTYPE=ALU;TSD=null	GT	0|1
4	16426943	DEL_pindel_11135	CATATATATATGTGTATATATATATATATATATATATATATATATATATATATATAT	C	.	PASS	AC=1838;AF=0.367013;AFR_AF=0.553;AMR_AF=0.2824;AN=5008;CS=DEL_pindel;EAS_AF=0.2401;END=16426999;EUR_AF=0.3698;NS=2504;SAS_AF=0.3037;SITEPOST=0.9898;SVTYPE=DEL	GT	0|1
4	16917031	CINV_delly_INV00075585	G	<INV>	.	PASS	AC=52;AF=0.0103834;AFR_AF=0.0015;AMR_AF=0.0173;AN=5008;CIEND=-114,114;CIPOS=-114,114;CS=CINV_delly;EAS_AF=0.001;END=16917489;EUR_AF=0.0179;IMPRECISE;NS=2504;SAS_AF=0.0194;SVTYPE=INV	GT	1|0
4	17202756	DEL_pindel_11150	TTATCCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCGCTGTTTTAGCCCAGGCCGGATTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	T	.	PASS	AC=4439;AF=0.886382;AFR_AF=0.829;AMR_AF=0.915;AN=5008;CS=DEL_pindel;EAS_AF=0.8869;END=17203066;EUR_AF=0.9095;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.9192;SITEPOST=0.9979;SVTYPE=DEL_ALU	GT	1|1
4	19643112	DEL_pindel_11205	TAACAGATGTCCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1280;AF=0.255591;AFR_AF=0.2632;AMR_AF=0.2536;AN=5008;CS=DEL_pindel;EAS_AF=0.2073;END=19643453;EUR_AF=0.2942;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2566;SITEPOST=0.99915;SVTYPE=DEL_ALU	GT	1|0
4	22432891	DEL_pindel_11260	AAAAGCCTTGTACTAATTCTTATATATATATTATATATAACAATATTGTACAAGGGTACAAT	A	.	PASS	AC=2725;AF=0.544129;AFR_AF=0.3926;AMR_AF=0.611;AN=5008;CS=DEL_pindel;EAS_AF=0.5893;END=22432952;EUR_AF=0.664;NS=2504;SAS_AF=0.5317;SITEPOST=0.9893;SVTYPE=DEL	GT	1|0
4	23721664	DEL_pindel_11282	TAGAAAAATACAGATTCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGACGCCTGTAGTCCCAGCTACTCCGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCCGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	.	PASS	AC=1615;AF=0.322484;AFR_AF=0.2466;AMR_AF=0.4179;AN=5008;CS=DEL_pindel;EAS_AF=0.2649;END=23721985;EUR_AF=0.4364;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2996;SITEPOST=0.9992;SVTYPE=DEL_ALU	GT	1|0
4	26438630	ALU_umary_ALU_3159	T	<INS:ME:ALU>	.	.	AC=1791;AF=0.357628;AFR_AF=0.1997;AMR_AF=0.464;AN=5008;CS=ALU_umary;EAS_AF=0.3849;EUR_AF=0.4185;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4049;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGCTAACATTCTT	GT	1|1
4	28320770	ALU_umary_ALU_3168	A	<INS:ME:ALU>	.	.	AC=892;AF=0.178115;AFR_AF=0.0303;AMR_AF=0.196;AN=5008;CS=ALU_umary;EAS_AF=0.2956;EUR_AF=0.1769;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.2454;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AACAAAAAAAAGTAGACAA	GT	1|0
4	28421593	BI_GS_DEL1_B4_P0722_85	T	<CN0>	100	PASS	AC=2554;AF=0.509984;AFR_AF=0.3775;AMR_AF=0.6758;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.501;END=28421942;EUR_AF=0.502;MC=UW_VH_354;NS=2504;SAS_AF=0.589;SVTYPE=DEL	GT	1|0
4	29661109	DEL_pindel_11420	AAGGGCCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGTGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=3751;AF=0.749002;AFR_AF=0.7814;AMR_AF=0.7277;AN=5008;CS=DEL_pindel;EAS_AF=0.8284;END=29661437;EUR_AF=0.6829;MEINFO=AluYb5,1,281,-;NS=2504;SAS_AF=0.7065;SITEPOST=0.9661;SVTYPE=DEL_ALU	GT	1|1
4	29907839	ALU_umary_ALU_3178	T	<INS:ME:ALU>	.	.	AC=1332;AF=0.265974;AFR_AF=0.3646;AMR_AF=0.1513;AN=5008;CS=ALU_umary;EAS_AF=0.2956;EUR_AF=0.2356;MEINFO=AluUndef,4,270,-;NS=2504;SAS_AF=0.2147;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=GACATGTAATATTTTT	GT	1|1
4	35240260	BI_GS_DEL1_B1_P0729_177	A	<CN0>	100	PASS	AC=640;AF=0.127796;AFR_AF=0.1165;AMR_AF=0.1671;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0308;END=35244433;EUR_AF=0.1909;MC=EM_DL_DEL69622,UW_VH_1413,YL_CN_LWK_918,SI_BD_4239,YL_CN_GBR_880;NS=2504;SAS_AF=0.1503;SVTYPE=DEL	GT	1|0
4	36469904	DEL_pindel_11545	TAGAAAATATAACGGGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAA	T	.	PASS	AC=2781;AF=0.555312;AFR_AF=0.6354;AMR_AF=0.5043;AN=5008;CS=DEL_pindel;EAS_AF=0.5506;END=36470237;EUR_AF=0.5557;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.4877;SITEPOST=0.988;SVTYPE=DEL_ALU	GT	1|1
4	36652565	DEL_pindel_11551	TAATATCTCCTCATTTGTTTATTTATTCAATAGTATTTATTTGGAACATAGTAGCTGCCAGGCACTCTGCTAGCAAGTGAAATGCAATGGTTAACAACATATGTAGTTTCCC	T	.	PASS	AC=810;AF=0.161741;AFR_AF=0.1392;AMR_AF=0.1787;AN=5008;CS=DEL_pindel;EAS_AF=0.244;END=36652676;EUR_AF=0.1879;NS=2504;SAS_AF=0.0685;SITEPOST=1;SVTYPE=DEL	GT	1|0
4	36780614	DEL_pindel_11553	ATCTTTTGTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGCGTAGCTGGGACTACAGACGCCCGCCACCACGCCCGGCTAATTTTTTTGTGTTTTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=235;AF=0.0469249;AFR_AF=0.0242;AMR_AF=0.0692;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=36780937;EUR_AF=0.1113;MEINFO=AluYf1,1,281,-;NS=2504;SAS_AF=0.0419;SITEPOST=0.9994;SVTYPE=DEL_ALU	GT	1|0
4	37483080	DEL_pindel_11569	TGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTCCAAGATCAAG	T	.	PASS	AC=745;AF=0.148762;AFR_AF=0.0401;AMR_AF=0.1888;AN=5008;CS=DEL_pindel;EAS_AF=0.0427;END=37483138;EUR_AF=0.2664;NS=2504;SAS_AF=0.2556;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
4	38264296	BI_GS_DEL1_B1_P0732_305	T	<CN0>	100	PASS	AC=678;AF=0.135383;AFR_AF=0.1914;AMR_AF=0.1268;AN=5008;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.0149;END=38265498;EUR_AF=0.1421;MC=UW_VH_13,EM_DL_DEL10767932,UW_VH_3139;NS=2504;SAS_AF=0.183;SVTYPE=DEL	GT	1|1
4	39031076	DEL_pindel_11600	TAAGAACTAATTTTTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3262;AF=0.651358;AFR_AF=0.7231;AMR_AF=0.6484;AN=5008;CS=DEL_pindel;EAS_AF=0.6399;END=39031358;EUR_AF=0.5805;MEINFO=AluYc1,38,281,+;NS=2504;SAS_AF=0.6411;SITEPOST=0.9627;SVTYPE=DEL_ALU	GT	1|0
4	40024928	UW_VH_359	T	<CN0>	100	PASS	AC=2411;AF=0.48143;AFR_AF=0.3389;AMR_AF=0.5778;AN=5008;CIEND=0,582;CIPOS=-608,0;CS=DEL_union;EAS_AF=0.3879;END=40026278;EUR_AF=0.6143;MC=YL_CN_JPT_1026,YL_CN_PUR_1121,YL_CN_PEL_835,YL_CN_CDX_817,YL_CN_IBS_823,YL_CN_TSI_860,BI_GS_DEL1_B5_P0734_14,YL_CN_KHV_969,YL_CN_MXL_785,SI_BD_4266,EM_DL_DEL10768552,YL_CN_CHB_958,YL_CN_FIN_894,YL_CN_ITU_912,YL_CN_GIH_698,YL_CN_CHS_954,YL_CN_MSL_850;NS=2504;SAS_AF=0.5654;SVTYPE=DEL	GT	0|1
4	40235048	INV_delly_INV00076146	G	<INV>	.	PASS	AC=853;AF=0.170327;AFR_AF=0.2874;AMR_AF=0.098;AN=5008;CIEND=-114,114;CIPOS=-114,114;CS=INV_delly;EAS_AF=0.0317;END=40237039;EUR_AF=0.1491;IMPRECISE;NS=2504;SAS_AF=0.228;SITEPOST=1;SVTYPE=INV	GT	1|0
4	41068089	DEL_pindel_11650	TTAAAAGCTTGAAATGAGGAAATTTTTTTTTCTGTATTGGAGAGGTTAGATGTCATGTTGATTGGAAAAAAAAAAAAACTTTTCAGTGACATATAACATATAGAAAATGCACACACG	T	.	PASS	AC=503;AF=0.100439;AFR_AF=0.0991;AMR_AF=0.098;AN=5008;CS=DEL_pindel;EAS_AF=0.0794;END=41068205;EUR_AF=0.1441;NS=2504;SAS_AF=0.0808;SITEPOST=0.9996;SVTYPE=DEL	GT	1|0
4	42762647	BI_GS_DEL1_B1_P0736_682	T	<CN0>	100	PASS	AC=1625;AF=0.324481;AFR_AF=0.68;AMR_AF=0.1902;AN=5008;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.1855;END=42769523;EUR_AF=0.2038;MC=UW_VH_2203,EM_DL_DEL69786,YL_CN_JPT_1028;NS=2504;SAS_AF=0.2065;SVTYPE=DEL	GT	0|1
4	43399986	ALU_umary_ALU_3259	A	<INS:ME:ALU>	.	.	AC=1639;AF=0.327276;AFR_AF=0.0953;AMR_AF=0.4496;AN=5008;CS=ALU_umary;EAS_AF=0.1617;EUR_AF=0.6143;MEINFO=AluYb9,1,280,+;NS=2504;SAS_AF=0.4294;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GAAATTTAAGCTA	GT	0|1
4	43751813	BI_GS_DEL1_B4_P0737_159	C	<CN0>	100	PASS	AC=2412;AF=0.481629;AFR_AF=0.1899;AMR_AF=0.4914;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6389;END=43752122;EUR_AF=0.6133;NS=2504;SAS_AF=0.5716;SVTYPE=DEL	GT	0|1
4	43931499	BI_GS_DEL1_B2_P0737_584	A	<CN0>	100	PASS	AC=4775;AF=0.953474;AFR_AF=0.8396;AMR_AF=0.9841;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.997;END=43931838;EUR_AF=0.996;MC=DEL_pindel_11726;NS=2504;SAS_AF=0.9969;SVTYPE=DEL	GT	1|1
4	44507275	DEL_pindel_11743	ATCTTTTTTTTTTTTTTTTTTTTAAATTTAAAACTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGT	A	.	PASS	AC=4786;AF=0.955671;AFR_AF=0.8563;AMR_AF=0.9813;AN=5008;CS=DEL_pindel;EAS_AF=0.994;END=44507729;EUR_AF=0.994;MEINFO=LINE1,5619,6019,-;NS=2504;SAS_AF=0.9928;SITEPOST=1;SVTYPE=DEL_LINE1	GT	1|1
4	44509377	DEL_pindel_11744	TAGAAAAAACATCAATATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATGGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4166;AF=0.831869;AFR_AF=0.7315;AMR_AF=0.879;AN=5008;CS=DEL_pindel;EAS_AF=0.8125;END=44509695;EUR_AF=0.9185;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.865;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|1
4	44971996	DEL_pindel_11760	TTTATTTATTATATTTATATATATTTATATATATAATATATTAATATATTTATTATTATTATTATTTATTTTTATATTTATATATTTATATTTATATTTATATTTATATTTATATATATTTATATATTATTAATATATTTATTATTATTATTATTATTATTTATTATTTATTA	T	.	PASS	AC=1930;AF=0.385383;AFR_AF=0.1664;AMR_AF=0.4769;AN=5008;CS=DEL_pindel;EAS_AF=0.3968;END=44972168;EUR_AF=0.506;NS=2504;SAS_AF=0.4806;SITEPOST=0.9996;SVTYPE=DEL	GT	1|0
4	46202797	UW_VH_362	C	<CN0>	100	PASS	AC=2507;AF=0.500599;AFR_AF=0.2209;AMR_AF=0.487;AN=5008;CIEND=0,545;CIPOS=-481,0;CS=DEL_union;EAS_AF=0.5139;END=46205026;EUR_AF=0.5805;MC=EM_DL_DEL69846,YL_CN_GWD_1290,BI_GS_DEL1_B1_P0740_143;NS=2504;SAS_AF=0.7924;SVTYPE=DEL	GT	1|1
4	54415654	ALU_umary_ALU_3287	G	<INS:ME:ALU>	.	.	AC=834;AF=0.166534;AFR_AF=0.1346;AMR_AF=0.2147;AN=5008;CS=ALU_umary;EAS_AF=0.1062;EUR_AF=0.2505;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.1513;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAGATGTGG	GT	0|1
4	55482419	DEL_pindel_11842	TAAGAAAGCTTATTTACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAACTACAAAAAATAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1842;AF=0.367812;AFR_AF=0.4342;AMR_AF=0.4251;AN=5008;CS=DEL_pindel;EAS_AF=0.2976;END=55482740;EUR_AF=0.3688;MEINFO=AluYa8,1,281,+;NS=2504;SAS_AF=0.3088;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	1|1
4	55808674	DEL_pindel_11850	AAAAACAAAACAGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAC	A	.	PASS	AC=2354;AF=0.470048;AFR_AF=0.5946;AMR_AF=0.5951;AN=5008;CS=DEL_pindel;EAS_AF=0.3403;END=55808918;EUR_AF=0.4751;MEINFO=AluY,68,281,+;NS=2504;SAS_AF=0.3415;SITEPOST=0.9983;SVTYPE=DEL_ALU	GT	1|1
4	55998554	DEL_pindel_11855	TGAGGTTTAGAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=878;AF=0.175319;AFR_AF=0.1097;AMR_AF=0.1628;AN=5008;CS=DEL_pindel;EAS_AF=0.1627;END=55998888;EUR_AF=0.2346;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2249;SITEPOST=0.9993;SVTYPE=DEL_ALU	GT	0|1
4	57501858	DEL_pindel_11881	GAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	.	PASS	AC=2135;AF=0.426318;AFR_AF=0.5794;AMR_AF=0.3458;AN=5008;CS=DEL_pindel;EAS_AF=0.4812;END=57501984;EUR_AF=0.2913;NS=2504;SAS_AF=0.3589;SITEPOST=0.9777;SVTYPE=DEL	GT	1|0
4	58087336	DEL_pindel_11888	TAGTAAATGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCTCAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTG	T	.	PASS	AC=3354;AF=0.669728;AFR_AF=0.702;AMR_AF=0.6988;AN=5008;CS=DEL_pindel;EAS_AF=0.6448;END=58087734;EUR_AF=0.6451;MEINFO=LINE1,5662,6019,-;NS=2504;SAS_AF=0.6564;SITEPOST=0.9906;SVTYPE=DEL_LINE1	GT	1|1
4	58148016	DEL_pindel_11889	TAAAAAATATTCAACCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3258;AF=0.650559;AFR_AF=0.6838;AMR_AF=0.6225;AN=5008;CS=DEL_pindel;EAS_AF=0.6597;END=58148342;EUR_AF=0.5954;MEINFO=AluYb6_2,17,281,+;NS=2504;SAS_AF=0.6728;SITEPOST=0.9862;SVTYPE=DEL_ALU	GT	1|0
4	59348231	DEL_pindel_11913	AGACTGCTATTGAGAGGGCTTACAGGCAGGAATTGCACAGAAAAGCTGCCTT	A	.	PASS	AC=344;AF=0.0686901;AFR_AF=0.0053;AMR_AF=0.1009;AN=5008;CS=DEL_pindel;EAS_AF=0.0367;END=59348282;EUR_AF=0.1441;NS=2504;SAS_AF=0.0869;SITEPOST=0.9962;SVTYPE=DEL	GT	1|0
4	59985387	DEL_pindel_11930	TGTTCTTTTTCTCTGTGTAGGGAGGACAGCTCTCACATGAGGGTCTTCTGATCTACTTTCAGAGAAGGTAAAGATCAAAGCGTCTTTCTAGCACGCACTCTTTCTACG	T	.	PASS	AC=2453;AF=0.489816;AFR_AF=0.3132;AMR_AF=0.4798;AN=5008;CS=DEL_pindel;EAS_AF=0.5169;END=59985494;EUR_AF=0.5994;NS=2504;SAS_AF=0.5951;SITEPOST=0.9997;SVTYPE=DEL	GT	1|0
4	61330102	BI_GS_DEL1_B5_P0755_327	A	<CN0>	100	PASS	AC=2498;AF=0.498802;AFR_AF=0.2027;AMR_AF=0.6988;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5665;END=61333188;EUR_AF=0.6918;MC=SI_BD_4393,YL_CN_GIH_720,UW_VH_369;NS=2504;SAS_AF=0.4888;SVTYPE=DEL	GT	0|1
4	61569228	DEL_pindel_11957	ATACAGCACACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=3438;AF=0.686502;AFR_AF=0.6581;AMR_AF=0.7075;AN=5008;CS=DEL_pindel;EAS_AF=0.7083;END=61569558;EUR_AF=0.6789;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6953;SITEPOST=0.9639;SVTYPE=DEL_ALU	GT	0|1
4	61939189	BI_GS_DEL1_B2_P0755_558	C	<CN0>	100	PASS	AC=1995;AF=0.398363;AFR_AF=0.18;AMR_AF=0.4597;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2778;END=61942243;EUR_AF=0.6342;MC=YL_CN_MSL_871,YL_CN_YRI_1251,SI_BD_4397,EM_DL_DEL71395,YL_CN_CHS_982;NS=2504;SAS_AF=0.5317;SVTYPE=DEL	GT	1|0
4	63668999	YL_CN_JPT_1054	T	<CN0>	100	PASS	AC=1148;AF=0.229233;AFR_AF=0.0946;AMR_AF=0.1729;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.3909;END=63676240;EUR_AF=0.2058;MC=UW_VH_13531,SI_BD_4409,BI_GS_DEL1_B5_P0757_690,UW_VH_371,EM_DL_DEL71426;NS=2504;SAS_AF=0.3088;SVTYPE=DEL	GT	1|0
4	63670474	BI_GS_DEL1_B3_P0757_31	C	<CN0>	100	PASS	AC=1135;AF=0.226637;AFR_AF=0.0885;AMR_AF=0.17;AN=5008;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.3889;END=63671759;EUR_AF=0.2048;NS=2504;SAS_AF=0.3088;SVTYPE=DEL	GT	1|0
4	64563186	ALU_umary_ALU_3331	G	<INS:ME:ALU>	.	.	AC=906;AF=0.180911;AFR_AF=0.0613;AMR_AF=0.2752;AN=5008;CS=ALU_umary;EAS_AF=0.2192;EUR_AF=0.3032;MEINFO=AluY,14,281,+;NS=2504;SAS_AF=0.1104;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=AAGAAAAAACTGTGTG	GT	1|1
4	65216746	ALU_umary_ALU_3340	G	<INS:ME:ALU>	.	.	AC=2161;AF=0.43151;AFR_AF=0.3215;AMR_AF=0.4222;AN=5008;CS=ALU_umary;EAS_AF=0.4633;EUR_AF=0.5119;MEINFO=AluUndef,4,280,-;NS=2504;SAS_AF=0.4714;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAAAAGTG	GT	1|1
4	66641109	DEL_pindel_12068	TTAAAATAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGAACACTTGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAAAAAAAAAAAAAAAAAAAAAAACGAAAAGTGATCCAAAAAAAAAATAAATAAAAAAAAAAATAAATAAAA	T	.	PASS	AC=3862;AF=0.771166;AFR_AF=0.6248;AMR_AF=0.8156;AN=5008;CS=DEL_pindel;EAS_AF=0.8482;END=66641420;EUR_AF=0.7992;MEINFO=LINE1,5958,5973,+;NS=2504;SAS_AF=0.8292;SITEPOST=0.9902;SVTYPE=DEL_LINE1	GT	1|0
4	67106616	ALU_umary_ALU_3354	C	<INS:ME:ALU>	.	.	AC=2618;AF=0.522764;AFR_AF=0.3691;AMR_AF=0.5692;AN=5008;CS=ALU_umary;EAS_AF=0.5813;EUR_AF=0.5706;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.5879;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAAGATTAAGATTTGC	GT	1|0
4	67754010	ALU_umary_ALU_3360	T	<INS:ME:ALU>	.	.	AC=403;AF=0.0804712;AFR_AF=0.0575;AMR_AF=0.0476;AN=5008;CS=ALU_umary;EAS_AF=0.0575;EUR_AF=0.0805;MEINFO=AluUndef,104,281,-;NS=2504;SAS_AF=0.1585;SITEPOST=1;SVLEN=177;SVTYPE=ALU;TSD=AAATAGACTCTTT	GT	0|1
4	67963892	ALU_umary_ALU_3362	T	<INS:ME:ALU>	.	.	AC=3018;AF=0.602636;AFR_AF=0.5492;AMR_AF=0.6153;AN=5008;CS=ALU_umary;EAS_AF=0.5714;EUR_AF=0.661;MEINFO=AluUndef,10,276,-;NS=2504;SAS_AF=0.638;SITEPOST=0.9971;SVLEN=266;SVTYPE=ALU;TSD=TCCTTACAACTTTT	GT	1|1
4	68873177	DEL_pindel_12115	ACTAGAGTAGCCAAAACAATTTCGGTAGAGGAGAATAAAGTGGGATAAATCATTTTTACTAATGTTAAGG	A	.	PASS	AC=1997;AF=0.398762;AFR_AF=0.3623;AMR_AF=0.4222;AN=5008;CS=DEL_pindel;EAS_AF=0.4127;END=68873246;EUR_AF=0.3728;NS=2504;SAS_AF=0.4438;SITEPOST=0.90315;SVTYPE=DEL	GT	0|1
4	69959841	DEL_pindel_12133	TGGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3181;AF=0.635184;AFR_AF=0.73;AMR_AF=0.634;AN=5008;CS=DEL_pindel;EAS_AF=0.6994;END=69960165;EUR_AF=0.506;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.5746;SITEPOST=0.9993;SVTYPE=DEL_ALU	GT	0|1
4	71926412	DEL_pindel_12172	CTCTTTCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAGAATGCCG	C	.	PASS	AC=3208;AF=0.640575;AFR_AF=0.6286;AMR_AF=0.7104;AN=5008;CS=DEL_pindel;EAS_AF=0.6696;END=71926572;EUR_AF=0.6123;MEINFO=AluY,154,281,+;NS=2504;SAS_AF=0.6063;SITEPOST=0.99;SVTYPE=DEL_ALU	GT	0|1
4	72829626	DEL_pindel_12179	ACTTATTTTTGTAATCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCGCCCGCCACCGCGCCCGGCTAACTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGC	A	.	PASS	AC=3173;AF=0.633586;AFR_AF=0.4349;AMR_AF=0.7075;AN=5008;CS=DEL_pindel;EAS_AF=0.7282;END=72829955;EUR_AF=0.6928;MEINFO=AluYb5,2,281,-;NS=2504;SAS_AF=0.6912;SITEPOST=0.9512;SVTYPE=DEL_ALU	GT	1|0
4	73418754	DEL_pindel_12197	GAATGAAGAAATGAAGAAATGCGTGAATGAATGAGAGCAGTTTGAGTCGGAAGGGGTATGTGAAATTAGCATGCATCTTCTTTTGGCTA	G	.	PASS	AC=2479;AF=0.495008;AFR_AF=0.5719;AMR_AF=0.621;AN=5008;CS=DEL_pindel;EAS_AF=0.3849;END=73418842;EUR_AF=0.5706;NS=2504;SAS_AF=0.3374;SITEPOST=0.9991;SVTYPE=DEL	GT	1|1
4	73831245	BI_GS_DEL1_B2_P0767_592	A	<CN0>	100	PASS	AC=2390;AF=0.477236;AFR_AF=0.5159;AMR_AF=0.4539;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5159;END=73831819;EUR_AF=0.4911;MC=UW_VH_377,DEL_pindel_12211,SI_BD_4476;NS=2504;SAS_AF=0.3875;SVTYPE=DEL	GT	0|1
4	78199221	DEL_pindel_12283	GCCCTAAGTATATTACGTGTATGGCTTCCTCTTCCAGGTCACATTGCTAAAGA	G	.	PASS	AC=1317;AF=0.262979;AFR_AF=0.3714;AMR_AF=0.2507;AN=5008;CS=DEL_pindel;EAS_AF=0.2371;END=78199273;EUR_AF=0.2097;NS=2504;SAS_AF=0.2065;SITEPOST=1;SVTYPE=DEL	GT	1|0
4	78236274	DEL_pindel_12284	TAAGAAGTGTGTGTACGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGTGGGGGGAGGGATGGCATTGGGAGATATACCTAATGCTGGATGACACGTTGGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1319;AF=0.263379;AFR_AF=0.3714;AMR_AF=0.2522;AN=5008;CS=DEL_pindel;EAS_AF=0.2351;END=78236540;EUR_AF=0.2107;MEINFO=LINE1,2700,2725,+;NS=2504;SAS_AF=0.2086;SITEPOST=1;SVTYPE=DEL_LINE1	GT	1|0
4	79159515	ALU_umary_ALU_3428	T	<INS:ME:ALU>	.	.	AC=2277;AF=0.454673;AFR_AF=0.1929;AMR_AF=0.513;AN=5008;CS=ALU_umary;EAS_AF=0.5347;EUR_AF=0.5179;MEINFO=AluYa5,1,269,+;NS=2504;SAS_AF=0.6196;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=TAAAAAAGCT	GT	1|0
4	80205728	DEL_pindel_12322	TAAAGAATGATTGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2309;AF=0.461062;AFR_AF=0.6475;AMR_AF=0.4827;AN=5008;CS=DEL_pindel;EAS_AF=0.2252;END=80206056;EUR_AF=0.4503;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4479;SITEPOST=0.9977;SVTYPE=DEL_ALU	GT	0|1
4	80360637	UW_VH_1739	G	<CN0>	100	PASS	AC=1235;AF=0.246605;AFR_AF=0.0764;AMR_AF=0.1484;AN=5008;CIEND=0,466;CIPOS=-412,0;CS=DEL_union;EAS_AF=0.4067;END=80362723;EUR_AF=0.1431;MC=SI_BD_4510,YL_CN_PJL_1017,EM_DL_DEL71863,BI_GS_DEL1_B2_P0774_245;NS=2504;SAS_AF=0.4877;SVTYPE=DEL	GT	1|0
4	81302526	DEL_pindel_12337	ACATATACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=3727;AF=0.744209;AFR_AF=0.6422;AMR_AF=0.7637;AN=5008;CS=DEL_pindel;EAS_AF=0.7827;END=81302865;EUR_AF=0.7744;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7975;SITEPOST=0.9555;SVTYPE=DEL_ALU	GT	0|1
4	81991515	DEL_pindel_12347	CAAGAAATAGCTTTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=3789;AF=0.756589;AFR_AF=0.7148;AMR_AF=0.7493;AN=5008;CS=DEL_pindel;EAS_AF=0.7609;END=81991836;EUR_AF=0.8002;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.7689;SITEPOST=0.9633;SVTYPE=DEL_ALU	GT	1|1
4	82630148	ALU_umary_ALU_3449	A	<INS:ME:ALU>	.	.	AC=1771;AF=0.353634;AFR_AF=0.4009;AMR_AF=0.3026;AN=5008;CS=ALU_umary;EAS_AF=0.2708;EUR_AF=0.4433;MEINFO=AluYa5,1,266,+;NS=2504;SAS_AF=0.319;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=AAAATATCAGACTTCA	GT	1|0
4	84221708	DEL_pindel_12380	TAAGAATTATTACACTTTGGGAGGACGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCCATCCGGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2731;AF=0.545327;AFR_AF=0.3374;AMR_AF=0.5418;AN=5008;CS=DEL_pindel;EAS_AF=0.7113;END=84221993;EUR_AF=0.6093;MEINFO=AluY,35,281,+;NS=2504;SAS_AF=0.592;SITEPOST=0.9926;SVTYPE=DEL_ALU	GT	1|1
4	86470382	ALU_umary_ALU_3474	A	<INS:ME:ALU>	.	.	AC=1845;AF=0.368411;AFR_AF=0.3245;AMR_AF=0.4121;AN=5008;CS=ALU_umary;EAS_AF=0.1657;EUR_AF=0.5586;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.41;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGAAATTGCCA	GT	1|1
4	86584502	ALU_umary_ALU_3475	G	<INS:ME:ALU>	.	.	AC=1252;AF=0.25;AFR_AF=0.2693;AMR_AF=0.2522;AN=5008;CS=ALU_umary;EAS_AF=0.0704;EUR_AF=0.4056;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.2474;SITEPOST=0.9997;SVLEN=279;SVTYPE=ALU;TSD=AAGAATGCTTGTG	GT	0|1
4	87066353	DEL_pindel_12432	CAAATTTCTATCTCTAGCCGGGCGTGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCTACAGAGCGAGACACCGTCTCAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=951;AF=0.189896;AFR_AF=0.3457;AMR_AF=0.196;AN=5008;CS=DEL_pindel;EAS_AF=0.1429;END=87066535;EUR_AF=0.1471;MEINFO=AluYg,134,281,+;NS=2504;SAS_AF=0.0675;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|0
4	88032137	DEL_pindel_12457	CTACTTAAACTTTATTTTTTTTTTTTTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	C	.	PASS	AC=2081;AF=0.415535;AFR_AF=0.3828;AMR_AF=0.4885;AN=5008;CS=DEL_pindel;EAS_AF=0.4266;END=88032469;EUR_AF=0.4672;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.3436;SITEPOST=0.9879;SVTYPE=DEL_ALU	GT	0|1
4	88775635	DEL_pindel_12470	TGATGCTGATCTATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=978;AF=0.195288;AFR_AF=0.171;AMR_AF=0.2003;AN=5008;CS=DEL_pindel;EAS_AF=0.1071;END=88775952;EUR_AF=0.2584;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2505;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|0
4	89681460	DEL_pindel_12482	TAGAAATGCCAAGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACGCGGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2097;AF=0.41873;AFR_AF=0.2943;AMR_AF=0.5317;AN=5008;CS=DEL_pindel;EAS_AF=0.377;END=89681782;EUR_AF=0.5915;MEINFO=AluYh7,1,281,+;NS=2504;SAS_AF=0.3722;SITEPOST=0.9978;SVTYPE=DEL_ALU	GT	1|1
4	91931556	BI_GS_DEL1_B2_P0785_570	G	<CN0>	100	PASS	AC=1284;AF=0.25639;AFR_AF=0.0537;AMR_AF=0.2205;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3919;END=91935838;EUR_AF=0.3936;MC=EM_DL_DEL72105,YL_CN_YRI_1298,UW_VH_389;NS=2504;SAS_AF=0.2751;SVTYPE=DEL	GT	0|1
4	91931666	SI_BD_4573	T	<CN0>	100	PASS	AC=1284;AF=0.25639;AFR_AF=0.0537;AMR_AF=0.2205;AN=5008;CIEND=-50,119;CIPOS=-119,50;CS=DEL_union;EAS_AF=0.3919;END=91933538;EUR_AF=0.3936;MC=BI_GS_DEL1_B5_P0785_952;NS=2504;SAS_AF=0.2751;SVTYPE=DEL	GT	0|1
4	91933849	UW_VH_11348	T	<CN0>	100	PASS	AC=1285;AF=0.256589;AFR_AF=0.0545;AMR_AF=0.2205;AN=5008;CIEND=0,341;CIPOS=-2362,0;CS=DEL_union;EAS_AF=0.3919;END=91936097;EUR_AF=0.3936;MC=BI_GS_DEL1_B2_P0785_572,UW_VH_2153,UW_VH_388;NS=2504;SAS_AF=0.2751;SVTYPE=DEL	GT	0|1
4	93393064	DEL_pindel_12560	TTTATCCATATTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCGGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCG	T	.	PASS	AC=1652;AF=0.329872;AFR_AF=0.4592;AMR_AF=0.2349;AN=5008;CS=DEL_pindel;EAS_AF=0.2292;END=93393384;EUR_AF=0.3022;MEINFO=AluYa4b,1,281,-;NS=2504;SAS_AF=0.3548;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|1
4	94439081	DEL_pindel_12582	TATGTATGTATATACATACATGTATATGTATGTATATACATACATGTACATGTATGTATATACATACATGTATATGTATGTATATACATACATGTAC	T	.	PASS	AC=1176;AF=0.234824;AFR_AF=0.1573;AMR_AF=0.2248;AN=5008;CS=DEL_pindel;EAS_AF=0.2123;END=94439177;EUR_AF=0.3598;NS=2504;SAS_AF=0.2413;SITEPOST=0.9929;SVTYPE=DEL	GT	0|1
4	95498964	DEL_pindel_12603	AAACTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=4429;AF=0.884385;AFR_AF=0.8434;AMR_AF=0.8833;AN=5008;CS=DEL_pindel;EAS_AF=0.9315;END=95499280;EUR_AF=0.8777;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.8988;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	0|1
4	96382454	DEL_pindel_12608	TGAAGCACAAGGCAAGAGCAAGTTGAATAGATGACAAAGGAGAGAAATCAAAAAAAGAAGATGTTATGCTCTGTTACTAAAATACTGTATTGTGAACATATTGTAATCAAATATAATTAGAAAAATATTCCCAAAGTAAAATTATAAATTATTGTTGGCTTGTCTAAAATACAATTACAATCCAAACAAGAGAATCAAGTATTTACA	T	.	PASS	AC=1358;AF=0.271166;AFR_AF=0.3502;AMR_AF=0.1311;AN=5008;CS=DEL_pindel;EAS_AF=0.376;END=96382660;EUR_AF=0.161;NS=2504;SAS_AF=0.2689;SITEPOST=1;SVTYPE=DEL	GT	1|0
4	98110644	DEL_pindel_12636	ATTTGCTGTAGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAG	A	.	PASS	AC=2134;AF=0.426118;AFR_AF=0.6573;AMR_AF=0.2738;AN=5008;CS=DEL_pindel;EAS_AF=0.3423;END=98110970;EUR_AF=0.3052;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4325;SITEPOST=0.9956;SVTYPE=DEL_ALU	GT	1|0
4	98133375	DEL_pindel_12638	TAGGAACTTAATTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1890;AF=0.377396;AFR_AF=0.5537;AMR_AF=0.2651;AN=5008;CS=DEL_pindel;EAS_AF=0.3115;END=98133689;EUR_AF=0.2833;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3834;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	1|0
4	98181261	DEL_pindel_12640	TAAAATTATACCCTGCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=845;AF=0.16873;AFR_AF=0.2602;AMR_AF=0.0807;AN=5008;CS=DEL_pindel;EAS_AF=0.121;END=98181582;EUR_AF=0.0924;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2352;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	1|0
4	98354318	DUP_gs_CNV_4_98354318_98359087	G	<CN0>,<CN2>	.	PASS	AC=551,2;AF=0.110024,0.00039936;AFR_AF=0.0431,0;AMR_AF=0.0576,0;AN=5008;CS=DUP_gs;EAS_AF=0.1111,0.001;END=98359087;EUR_AF=0.1322,0;MC=UW_VH_2737,YL_CN_FIN_964,BI_GS_DEL1_B1_P0792_297,EM_DL_DEL72527;NS=2504;SAS_AF=0.2137,0.001;SITEPOST=1;SVTYPE=CNV	GT	1|0
4	98590652	DEL_pindel_12651	TGAAAGTTTATTGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2759;AF=0.550919;AFR_AF=0.584;AMR_AF=0.5548;AN=5008;CS=DEL_pindel;EAS_AF=0.4752;END=98590970;EUR_AF=0.4891;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6452;SITEPOST=0.99605;SVTYPE=DEL_ALU	GT	1|0
4	100023042	DEL_pindel_12685	AAAAAAACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	A	.	PASS	AC=3000;AF=0.599042;AFR_AF=0.59;AMR_AF=0.5274;AN=5008;CS=DEL_pindel;EAS_AF=0.6786;END=100023377;EUR_AF=0.5288;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.6524;SITEPOST=0.9428;SVTYPE=DEL_ALU	GT	0|1
4	100070288	DEL_pindel_12686	TGAAAAGACCCCTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3570;AF=0.712859;AFR_AF=0.7466;AMR_AF=0.7133;AN=5008;CS=DEL_pindel;EAS_AF=0.6776;END=100070604;EUR_AF=0.7117;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7045;SITEPOST=0.9573;SVTYPE=DEL_ALU	GT	1|0
4	101244846	DEL_pindel_12706	ATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCGCGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCC	A	.	PASS	AC=2877;AF=0.574481;AFR_AF=0.6747;AMR_AF=0.5259;AN=5008;CS=DEL_pindel;EAS_AF=0.245;END=101245110;EUR_AF=0.7624;MEINFO=AluYg6,45,281,-;NS=2504;SAS_AF=0.6196;SITEPOST=0.9996;SVTYPE=DEL_ALU	GT	1|1
4	101293066	DEL_pindel_12708	GGATTTAAGTGAGGCCTTAACTATAGAGTCTTTTGTATAATACCCCATCATGATTGTGCCAACCTCTACCA	G	.	PASS	AC=593;AF=0.118411;AFR_AF=0.0719;AMR_AF=0.1542;AN=5008;CS=DEL_pindel;EAS_AF=0.003;END=101293136;EUR_AF=0.2137;NS=2504;SAS_AF=0.1769;SITEPOST=0.9988;SVTYPE=DEL	GT	0|1
4	101390634	DEL_pindel_12710	AAAATGAAAAAGCAGCTTACAAATTGAGAAAAATAATTTGTAAATTATATATCTGATAAGGAGTTAATAGTCAAAGTTTATAAAATAATTATTTAATTTAAGTCTTTAATCTATCGAGTTAATTTTTGAATATGGTGTAAAGAAGGGGTACAGTTTTAATCTTCTGCATATGGCTAGCC	A	.	PASS	AC=1260;AF=0.251597;AFR_AF=0.0552;AMR_AF=0.2594;AN=5008;CS=DEL_pindel;EAS_AF=0.1399;END=101390812;EUR_AF=0.508;NS=2504;SAS_AF=0.363;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
4	102712356	DEL_pindel_12740	GTGTCTGCAACTTCTGAGGAGCTGGAACTTTCCCCAGCACCCGGGTCAGGGTCC	G	.	PASS	AC=120;AF=0.0239617;AFR_AF=0.0023;AMR_AF=0.0202;AN=5008;CS=DEL_pindel;EAS_AF=0.0278;END=102712409;EUR_AF=0.0338;NS=2504;SAS_AF=0.0419;SITEPOST=0.9996;SVTYPE=DEL	GT	1|0
4	102787786	DEL_pindel_12742	TAGGAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACGCCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAATTTAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1934;AF=0.386182;AFR_AF=0.5401;AMR_AF=0.2622;AN=5008;CS=DEL_pindel;EAS_AF=0.3304;END=102788351;EUR_AF=0.3688;MEINFO=LINE1,5537,5600,+;NS=2504;SAS_AF=0.3415;SITEPOST=0.9992;SVTYPE=DEL_LINE1	GT	1|1
4	104894032	SI_BD_4644	T	<CN0>	100	PASS	AC=3389;AF=0.676717;AFR_AF=0.5666;AMR_AF=0.6729;AN=5008;CIEND=-50,268;CIPOS=-268,65;CS=DEL_union;EAS_AF=0.8393;END=104894690;EUR_AF=0.5964;NS=2504;SAS_AF=0.7434;SVTYPE=DEL	GT	1|1
4	106507402	ALU_umary_ALU_3574	A	<INS:ME:ALU>	.	.	AC=313;AF=0.0625;AFR_AF=0.1362;AMR_AF=0.0447;AN=5008;CS=ALU_umary;EAS_AF=0.003;EUR_AF=0.0696;MEINFO=AluUndef,5,273,+;NS=2504;SAS_AF=0.0297;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAGAAATGCAAACA	GT	0|1
4	106636862	ALU_umary_ALU_3576	A	<INS:ME:ALU>	.	.	AC=401;AF=0.0800719;AFR_AF=0.1694;AMR_AF=0.0533;AN=5008;CS=ALU_umary;EAS_AF=0.0476;EUR_AF=0.0567;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0358;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAATATTAAAGA	GT	1|0
4	107437718	BI_GS_DEL1_B1_P0801_364	T	<CN0>	100	PASS	AC=1553;AF=0.310104;AFR_AF=0.1445;AMR_AF=0.4308;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3621;END=107438504;EUR_AF=0.3161;MC=SI_BD_4656,EM_DL_DEL10797593;NS=2504;SAS_AF=0.3885;SVTYPE=DEL	GT	0|1
4	107840622	DEL_pindel_12849	AAGTGAGCTGCATCAGAGATTGTTGTCAAACTAATAAATCTTCTGAGGTTCTATCGAACCAGCAGTCATTCTAGTGGGAAACTGCTCAGGCCATAGCTGCTGAAGAAGTTCTAGCTCACCCAGGCATCTGGAAACCCTATGGCTGAGACAGAGCAAAATATGGAATAAGGAAGAAAAATTTTAGCTATTAACCTGAAGATTTTAAACTTTGATGTCTTTGGGCTCTTTATCATAAACAGGAAGATAATGATTGCAGACTTTAATTCTTTTGAACTTCAAGTTATTTTGACTTTAACATGCAAGAGGATTTAATTTTTGTCCTTTACTTTCTCCCTAAGAAATTTTC	A	.	PASS	AC=81;AF=0.0161741;AFR_AF=0.0242;AMR_AF=0.0202;AN=5008;CS=DEL_pindel;EAS_AF=0;END=107840967;EUR_AF=0.0298;NS=2504;SAS_AF=0.0051;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
4	111383200	DEL_pindel_12899	GCTATGGCTCACACTATCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGA	G	.	PASS	AC=3645;AF=0.727835;AFR_AF=0.8033;AMR_AF=0.7839;AN=5008;CS=DEL_pindel;EAS_AF=0.5724;END=111383532;EUR_AF=0.825;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6462;SITEPOST=0.9996;SVTYPE=DEL_ALU	GT	1|1
4	111516319	DEL_pindel_12900	AATATCCTACATTAGTGTAAGTCTAGAAGTGGATTATTAATAGATGATATGAAACCTTTATTCAATTGATGTAGCCAAAAAACACATAACATTTTTAAACAGTCTTACCATTGCCTCATGTTGAGATTGCTGCATAACAAATTATCCCATAACTTAGCCTGGTGTCATGGTGCATGTCTGTAGTCACAGCT	A	.	PASS	AC=3991;AF=0.796925;AFR_AF=0.469;AMR_AF=0.9323;AN=5008;CS=DEL_pindel;EAS_AF=0.869;END=111516509;EUR_AF=0.9612;NS=2504;SAS_AF=0.9008;SITEPOST=0.9992;SVTYPE=DEL	GT	1|1
4	113348500	DEL_pindel_12930	ATTATATACATGTTTGATATAAAACATGTATTTTTAAAAATAGTATTTTTAAAAATAGTATTT	A	.	PASS	AC=2618;AF=0.522764;AFR_AF=0.5484;AMR_AF=0.4755;AN=5008;CS=DEL_pindel;EAS_AF=0.6062;END=113348562;EUR_AF=0.4861;NS=2504;SAS_AF=0.4734;SITEPOST=0.9924;SVTYPE=DEL	GT	1|1
4	113469974	DEL_pindel_12932	TAAAAATGTAAAGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	T	.	PASS	AC=2960;AF=0.591054;AFR_AF=0.5303;AMR_AF=0.5951;AN=5008;CS=DEL_pindel;EAS_AF=0.7163;END=113470281;EUR_AF=0.4841;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.6513;SITEPOST=0.9929;SVTYPE=DEL_ALU	GT	1|0
4	115549930	ALU_umary_ALU_3613	G	<INS:ME:ALU>	.	.	AC=1939;AF=0.387181;AFR_AF=0.2277;AMR_AF=0.4193;AN=5008;CS=ALU_umary;EAS_AF=0.4812;EUR_AF=0.4155;MEINFO=AluUndef,16,281,+;NS=2504;SAS_AF=0.454;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=AAGAAAG	GT	0|1
4	115624597	DEL_pindel_12953	AAAGTCTATCTTGTTTTGTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCAC	A	.	PASS	AC=3904;AF=0.779553;AFR_AF=0.6914;AMR_AF=0.7939;AN=5008;CS=DEL_pindel;EAS_AF=0.8165;END=115624870;EUR_AF=0.8101;MEINFO=AluYb6_2,56,281,-;NS=2504;SAS_AF=0.819;SITEPOST=0.98485;SVTYPE=DEL_ALU	GT	0|1
4	115743887	DEL_pindel_12955	GCCAGGCTTTGGTGATATATGAGATTTTAGGCATTAGAAAAACAATAAAAGTTTTTGAATGGAAATTAATAACATATAAATATCTTATTTCAGGCATAAAATGTTGTGTATTTGCAGTTTTAAAAATGCAGAAAACAGGCTGGGCAGCTGTGGCTCATGCCTGTAACCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCTAACATGGTGAAAC	G	.	PASS	AC=1193;AF=0.238219;AFR_AF=0.1067;AMR_AF=0.3242;AN=5008;CS=DEL_pindel;EAS_AF=0.1587;END=115744132;EUR_AF=0.4364;NS=2504;SAS_AF=0.2331;SITEPOST=0.999;SVTYPE=DEL	GT	1|1
4	115928726	BI_GS_DEL1_B1_P0809_782	T	<CN0>	100	PASS	AC=1981;AF=0.395567;AFR_AF=0.3759;AMR_AF=0.3112;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4315;END=115931880;EUR_AF=0.336;MC=YL_CN_CEU_1237,UW_VH_4628,YL_CN_JPT_1120,UW_VH_13768;NS=2504;SAS_AF=0.5061;SVTYPE=DEL	GT	1|1
4	117251478	DEL_pindel_12990	ACAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=3263;AF=0.651558;AFR_AF=0.5212;AMR_AF=0.7262;AN=5008;CS=DEL_pindel;EAS_AF=0.6964;END=117251795;EUR_AF=0.7654;MEINFO=AluYa4_5,2,281,-;NS=2504;SAS_AF=0.6115;SITEPOST=0.9944;SVTYPE=DEL_ALU	GT	1|0
4	119125417	BI_GS_DEL1_B2_P0813_103	G	<CN0>	100	PASS	AC=784;AF=0.15655;AFR_AF=0.1649;AMR_AF=0.1354;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0536;END=119130206;EUR_AF=0.1869;MC=SI_BD_4727,UW_VH_2365,YL_CN_STU_1016;NS=2504;SAS_AF=0.2352;SVTYPE=DEL	GT	1|0
4	119296342	DEL_pindel_13022	TGTCTTTCATTGTTTTTTTTTTTTTATTTTTTTTTTTTTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGTGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1458;AF=0.291134;AFR_AF=0.2587;AMR_AF=0.2824;AN=5008;CS=DEL_pindel;EAS_AF=0.3036;END=119296678;EUR_AF=0.2813;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.3384;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|0
4	119774736	ALU_umary_ALU_3640	T	<INS:ME:ALU>	.	.	AC=355;AF=0.0708866;AFR_AF=0.0053;AMR_AF=0.062;AN=5008;CS=ALU_umary;EAS_AF=0.0813;EUR_AF=0.1183;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1063;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CTCTAGTTTAGAACTTTTCT	GT	1|0
4	120017235	DEL_pindel_13035	TAAAAGATGCTGCAATGAGGCCGGGCGCGGTGGCTCACGCCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTCGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3112;AF=0.621406;AFR_AF=0.4501;AMR_AF=0.67;AN=5008;CS=DEL_pindel;EAS_AF=0.6835;END=120017555;EUR_AF=0.7127;MEINFO=AluYa4_3,1,281,+;NS=2504;SAS_AF=0.6605;SITEPOST=0.9799;SVTYPE=DEL_ALU	GT	1|1
4	120639904	ALU_umary_ALU_3643	A	<INS:ME:ALU>	.	.	AC=1659;AF=0.33127;AFR_AF=0.2995;AMR_AF=0.2594;AN=5008;CS=ALU_umary;EAS_AF=0.2659;EUR_AF=0.3509;MEINFO=AluYa4_2,1,281,+;NS=2504;SAS_AF=0.4724;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAACACCTTCA	GT	1|0
4	120865434	BI_GS_DEL1_B4_P0814_173	G	<CN0>	100	PASS	AC=313;AF=0.0625;AFR_AF=0.0461;AMR_AF=0.0519;AN=5008;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0188;END=120866627;EUR_AF=0.0606;MC=UW_VH_16088,EM_DL_DEL10803535,UW_VH_2457,SI_BD_4739;NS=2504;SAS_AF=0.1391;SVTYPE=DEL	GT	1|0
4	121407647	DEL_pindel_13050	TTCACACAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	T	.	PASS	AC=823;AF=0.164337;AFR_AF=0.0938;AMR_AF=0.1772;AN=5008;CS=DEL_pindel;EAS_AF=0.0962;END=121407970;EUR_AF=0.2843;MEINFO=AluYa3_4,1,281,-;NS=2504;SAS_AF=0.1973;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|0
4	121582257	ALU_umary_ALU_3646	T	<INS:ME:ALU>	.	.	AC=906;AF=0.180911;AFR_AF=0.0946;AMR_AF=0.121;AN=5008;CS=ALU_umary;EAS_AF=0.3671;EUR_AF=0.1372;MEINFO=AluYb8,1,277,-;NS=2504;SAS_AF=0.1933;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=TACTGCTTGTCTT	GT	0|1
4	121808929	DEL_pindel_13061	AGACATTTTATCCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2051;AF=0.409545;AFR_AF=0.5703;AMR_AF=0.4035;AN=5008;CS=DEL_pindel;EAS_AF=0.373;END=121809246;EUR_AF=0.2913;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.3558;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	0|1
4	125867361	DEL_pindel_13141	TAAGAGATTTTTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3487;AF=0.696286;AFR_AF=0.6831;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.7609;END=125867690;EUR_AF=0.6302;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.7209;SITEPOST=0.95865;SVTYPE=DEL_ALU	GT	1|0
4	130062076	UW_VH_2792	T	<CN0>	100	PASS	AC=6;AF=0.00119808;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=0,88;CIPOS=-84,0;CS=DEL_union;EAS_AF=0.001;END=130069013;EUR_AF=0.005;MC=YL_CN_TSI_962,BI_GS_DEL1_B1_P0824_49;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0|1
4	130066189	UW_VH_3876	A	<CN0>	100	PASS	AC=1607;AF=0.320887;AFR_AF=0.2307;AMR_AF=0.3746;AN=5008;CIEND=0,94;CIPOS=-245,0;CS=DEL_union;EAS_AF=0.3472;END=130068435;EUR_AF=0.3201;MC=EM_DL_DEL73629,BI_GS_DEL1_B1_P0824_54,YL_CN_GBR_992;NS=2504;SAS_AF=0.3783;SVTYPE=DEL	GT	0|1
4	130590920	DEL_pindel_13231	TAAGAAGTTCTTCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2617;AF=0.522564;AFR_AF=0.7186;AMR_AF=0.5548;AN=5008;CS=DEL_pindel;EAS_AF=0.4058;END=130591211;EUR_AF=0.4085;MEINFO=AluYb6_2,25,281,+;NS=2504;SAS_AF=0.4724;SITEPOST=0.9948;SVTYPE=DEL_ALU	GT	1|0
4	131611192	DEL_pindel_13247	TTATATATATATATATATATATATATATATATATATATATATACACATATATATATATATACATATATATATATATATATATACACATATATATATATATACATATGTATATATATATATATACATATATATATATATATATATACACATATATATATATATACATATA	T	.	PASS	AC=3357;AF=0.670327;AFR_AF=0.6165;AMR_AF=0.6527;AN=5008;CS=DEL_pindel;EAS_AF=0.7321;END=131611360;EUR_AF=0.675;NS=2504;SAS_AF=0.6871;SITEPOST=0.91045;SVTYPE=DEL	GT	0|1
4	131694825	DEL_pindel_13249	TAAGAAATATAGAAGGAGATCGAAACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAAGTCCCGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	.	PASS	AC=2776;AF=0.554313;AFR_AF=0.5567;AMR_AF=0.5807;AN=5008;CS=DEL_pindel;EAS_AF=0.5188;END=131695074;EUR_AF=0.5885;MEINFO=AluY,71,281,+;NS=2504;SAS_AF=0.5337;SITEPOST=0.9812;SVTYPE=DEL_ALU	GT	1|0
4	133180785	UW_VH_2928	C	<CN0>	100	PASS	AC=2037;AF=0.406749;AFR_AF=0.4788;AMR_AF=0.3833;AN=5008;CIEND=0,484;CIPOS=-448,0;CS=DEL_union;EAS_AF=0.4038;END=133182979;EUR_AF=0.3827;MC=BI_GS_DEL1_B4_P0827_35,YL_CN_JPT_1142,YL_CN_ASW_1087,SI_BD_4793,YL_CN_YRI_1344,YL_CN_PJL_1062,EM_DL_DEL73743;NS=2504;SAS_AF=0.3538;SVTYPE=DEL	GT	1|0
4	133619876	DEL_pindel_13289	TGATACTTGCATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3033;AF=0.605631;AFR_AF=0.5567;AMR_AF=0.6138;AN=5008;CS=DEL_pindel;EAS_AF=0.6319;END=133620182;EUR_AF=0.6789;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.5634;SITEPOST=0.99;SVTYPE=DEL_ALU	GT	1|0
4	133819597	DEL_pindel_13295	TAAAAATGGCTGGAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2765;AF=0.552117;AFR_AF=0.556;AMR_AF=0.5591;AN=5008;CS=DEL_pindel;EAS_AF=0.5744;END=133819920;EUR_AF=0.5487;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5225;SITEPOST=0.9955;SVTYPE=DEL_ALU	GT	1|0
4	134295543	DEL_pindel_13312	AATAAATTTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=1341;AF=0.267772;AFR_AF=0.2322;AMR_AF=0.2507;AN=5008;CS=DEL_pindel;EAS_AF=0.2976;END=134295863;EUR_AF=0.2942;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.2699;SITEPOST=0.9986;SVTYPE=DEL_ALU	GT	1|0
4	134596423	L1_umary_LINE1_967	A	<INS:ME:LINE1>	.	.	AC=1655;AF=0.330471;AFR_AF=0.0431;AMR_AF=0.3804;AN=5008;CS=L1_umary;EAS_AF=0.4524;EUR_AF=0.3638;MEINFO=LINE1,5598,5990,-;NS=2504;SAS_AF=0.5235;SITEPOST=1;SVLEN=392;SVTYPE=LINE1;TSD=A	GT	0|1
4	135433008	BI_GS_DEL1_B4_P0829_90	T	<CN0>	100	PASS	AC=3168;AF=0.632588;AFR_AF=0.5098;AMR_AF=0.5519;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9802;END=135435698;EUR_AF=0.5517;MC=UW_VH_19549,UW_VH_5412,YL_CN_ASW_1089,UW_VH_15861,UW_VH_18323,UW_VH_1747,YL_CN_CDX_904,YL_CN_PJL_1066,EM_DL_DEL73790,SI_BD_4805;NS=2504;SAS_AF=0.5808;SVTYPE=DEL	GT	1|1
4	138091987	BI_GS_DEL1_B1_P0832_68	G	<CN0>	100	PASS	AC=846;AF=0.16893;AFR_AF=0.1331;AMR_AF=0.1945;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1369;END=138100624;EUR_AF=0.17;MC=UW_VH_20415,YL_CN_GIH_793,UW_VH_422,UW_VH_8383,EM_DL_DEL73854,SI_BD_4816;NS=2504;SAS_AF=0.2311;SVTYPE=DEL	GT	0|1
4	138177334	L1_umary_LINE1_971	A	<INS:ME:LINE1>	.	.	AC=2184;AF=0.436102;AFR_AF=0.413;AMR_AF=0.4481;AN=5008;CS=L1_umary;EAS_AF=0.3651;EUR_AF=0.4652;MEINFO=LINE1,4508,6008,+;NS=2504;SAS_AF=0.502;SITEPOST=1;SVLEN=1500;SVTYPE=LINE1;TSD=AAGAAAGCTA	GT	0|1
4	138299005	ALU_umary_ALU_3748	A	<INS:ME:ALU>	.	.	AC=1806;AF=0.360623;AFR_AF=0.4569;AMR_AF=0.353;AN=5008;CS=ALU_umary;EAS_AF=0.3948;EUR_AF=0.327;MEINFO=AluUndef,5,277,+;NS=2504;SAS_AF=0.2352;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AAGAATAATGTTACCA	GT	0|1
4	138966189	BI_GS_DEL1_B2_P0832_644	A	<CN0>	100	PASS	AC=1374;AF=0.274361;AFR_AF=0.1914;AMR_AF=0.3357;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1786;END=138967210;EUR_AF=0.3827;MC=UW_VH_423,SI_BD_4820,EM_DL_DEL10810667;NS=2504;SAS_AF=0.3303;SVTYPE=DEL	GT	1|0
4	141497059	DEL_pindel_13448	CAGGCCCTCCTGTGTCCGTCTATTGATCCTGAGTGTCTGGGAAAGATGAAGCTCCCACACCAGGACAA	C	.	PASS	AC=150;AF=0.0299521;AFR_AF=0.0045;AMR_AF=0.0447;AN=5008;CS=DEL_pindel;EAS_AF=0.003;END=141497126;EUR_AF=0.0736;NS=2504;SAS_AF=0.0368;SITEPOST=0.99895;SVTYPE=DEL	GT	1|0
4	142230774	UW_VH_23251	T	<CN0>	100	PASS	AC=1908;AF=0.38099;AFR_AF=0.5106;AMR_AF=0.2421;AN=5008;CIEND=0,332;CIPOS=-298,0;CS=DEL_union;EAS_AF=0.3224;END=142233063;EUR_AF=0.3837;MC=YL_CN_TSI_975,UW_VH_19550,UW_VH_18573,BI_GS_DEL1_B1_P0836_209,YL_CN_GIH_795,EM_DL_DEL73948,UW_VH_17903,UW_VH_21239,YL_CN_ASW_1098,UW_VH_7242,UW_VH_2659,SI_BD_4838,YL_CN_MXL_903,UW_VH_4350,YL_CN_PUR_1248;NS=2504;SAS_AF=0.362;SVTYPE=DEL	GT	0|1
4	143029543	DEL_pindel_13495	CACCTCAAATATCCTCACAATCATCAAATGTGAACCTAGATAAAATACCATGTATAAA	C	.	PASS	AC=2546;AF=0.508387;AFR_AF=0.1649;AMR_AF=0.67;AN=5008;CS=DEL_pindel;EAS_AF=0.5734;END=143029600;EUR_AF=0.6809;NS=2504;SAS_AF=0.6135;SITEPOST=0.9998;SVTYPE=DEL	GT	1|1
4	145316454	UW_VH_425	C	<CN0>	100	PASS	AC=2232;AF=0.445687;AFR_AF=0.5061;AMR_AF=0.4683;AN=5008;CIEND=0,452;CIPOS=-483,0;CS=DEL_union;EAS_AF=0.4593;END=145319900;EUR_AF=0.3976;MC=BI_GS_DEL1_B1_P0839_253,YL_CN_ITU_1032,SI_BD_4852;NS=2504;SAS_AF=0.3834;SVTYPE=DEL	GT	1|1
4	146438780	BI_GS_DEL1_B1_P0840_365	T	<CN0>	100	PASS	AC=1209;AF=0.241414;AFR_AF=0.0923;AMR_AF=0.2767;AN=5008;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0.0992;END=146440426;EUR_AF=0.4622;MC=YL_CN_GBR_1004,UW_VH_18807,EM_DL_DEL10813171,UW_VH_10243,UW_VH_2660,UW_VH_4911,UW_VH_426,UW_VH_4239;NS=2504;SAS_AF=0.3374;SVTYPE=DEL	GT	1|1
4	147225296	L1_umary_LINE1_985	G	<INS:ME:LINE1>	.	.	AC=2992;AF=0.597444;AFR_AF=0.6256;AMR_AF=0.6225;AN=5008;CS=L1_umary;EAS_AF=0.5923;EUR_AF=0.5666;MEINFO=LINE1,11,6007,+;NS=2504;SAS_AF=0.5787;SITEPOST=1;SVLEN=5996;SVTYPE=LINE1;TSD=AAGAAGTTAAAATAG	GT	0|1
4	148053950	ALU_umary_ALU_3796	T	<INS:ME:ALU>	.	.	AC=2217;AF=0.442692;AFR_AF=0.2837;AMR_AF=0.5231;AN=5008;CS=ALU_umary;EAS_AF=0.4663;EUR_AF=0.5467;MEINFO=AluYa5,9,281,+;NS=2504;SAS_AF=0.4693;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AAGAGTAAAGCT	GT	1|0
4	150161039	DEL_pindel_13614	TAAAACTGGGCTGCTCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTACCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2886;AF=0.576278;AFR_AF=0.6649;AMR_AF=0.4928;AN=5008;CS=DEL_pindel;EAS_AF=0.5248;END=150161381;EUR_AF=0.6103;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5337;SITEPOST=0.9898;SVTYPE=DEL_ALU	GT	1|0
4	150951027	DEL_pindel_13622	TTAAAGTATTTTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAACAAA	T	.	PASS	AC=4065;AF=0.811701;AFR_AF=0.8487;AMR_AF=0.8228;AN=5008;CS=DEL_pindel;EAS_AF=0.7143;END=150951349;EUR_AF=0.831;MEINFO=AluYj3,1,281,+;NS=2504;SAS_AF=0.8344;SITEPOST=0.9717;SVTYPE=DEL_ALU	GT	1|0
4	152340705	DEL_pindel_13645	GGTCTGTTCCTCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGCTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGT	G	.	PASS	AC=1868;AF=0.373003;AFR_AF=0.4365;AMR_AF=0.3703;AN=5008;CS=DEL_pindel;EAS_AF=0.3125;END=152341552;EUR_AF=0.4175;MEINFO=LINE1,5225,6019,-;NS=2504;SAS_AF=0.3057;SITEPOST=0.9996;SVTYPE=DEL_LINE1	GT	0|1
4	157002032	DEL_pindel_13755	TACCTATTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC	T	.	PASS	AC=3686;AF=0.736022;AFR_AF=0.708;AMR_AF=0.7133;AN=5008;CS=DEL_pindel;EAS_AF=0.7629;END=157002343;EUR_AF=0.7296;MEINFO=AluYe,21,281,-;NS=2504;SAS_AF=0.7689;SITEPOST=0.9365;SVTYPE=DEL_ALU	GT	1|1
4	160670214	DEL_pindel_13813	CCTTCCCTTTCTCCTTTCCTCTTCCCTTTTTCCTTTCTTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCTT	C	.	PASS	AC=1685;AF=0.336462;AFR_AF=0.2163;AMR_AF=0.379;AN=5008;CS=DEL_pindel;EAS_AF=0.3601;END=160670328;EUR_AF=0.3579;NS=2504;SAS_AF=0.4223;SITEPOST=0.996;SVTYPE=DEL	GT	1|0
4	162053240	UW_VH_1748	G	<CN0>	100	PASS	AC=1953;AF=0.389976;AFR_AF=0.2579;AMR_AF=0.3991;AN=5008;CIEND=0,286;CIPOS=-272,0;CS=DEL_union;EAS_AF=0.4157;END=162053669;EUR_AF=0.4135;NS=2504;SAS_AF=0.5112;SVTYPE=DEL	GT	1|0
4	162053282	BI_GS_DEL1_B1_P0856_34	A	<CN0>	100	PASS	AC=1954;AF=0.390176;AFR_AF=0.2595;AMR_AF=0.3991;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4157;END=162053551;EUR_AF=0.4135;NS=2504;SAS_AF=0.5102;SVTYPE=DEL	GT	1|0
4	162381498	DEL_pindel_13844	GTCATTTACATTAGGTGTATCTCCTAATGCTATCCCTCCCCCCTCCCCCCACCTCACAACAGGCCCGGGTGTGTGATGTTCCCCACCCCGTGTCCAAGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGGGATGAAGCTAGAAACCATCATCCTTAGAGAATTT	G	.	PASS	AC=1340;AF=0.267572;AFR_AF=0.0825;AMR_AF=0.3718;AN=5008;CS=DEL_pindel;EAS_AF=0.4345;END=162381664;EUR_AF=0.2326;NS=2504;SAS_AF=0.3078;SITEPOST=0.999;SVTYPE=DEL	GT	1|0
4	162449273	UW_VH_16768	A	<CN0>	100	PASS	AC=1201;AF=0.239816;AFR_AF=0.1127;AMR_AF=0.3199;AN=5008;CIEND=0,439;CIPOS=-257,0;CS=DEL_union;EAS_AF=0.3958;END=162451675;EUR_AF=0.1829;MC=BI_GS_DEL1_B2_P0856_268,UW_VH_434,UW_VH_13887,UW_VH_5088,YL_CN_BEB_902,YL_CN_CLM_910,YL_CN_CHB_1089,SI_BD_4937;NS=2504;SAS_AF=0.2526;SVTYPE=DEL	GT	1|1
4	162776133	DEL_pindel_13854	ATTTTGAGGATATGGTTGAGAGGTTTTTTTTTTTTTTTTTTTTGCTTTCTAGCCTTGTTACTATTAAGTTCTATTAAG	A	.	PASS	AC=2224;AF=0.444089;AFR_AF=0.3888;AMR_AF=0.4741;AN=5008;CS=DEL_pindel;EAS_AF=0.4196;END=162776210;EUR_AF=0.4841;NS=2504;SAS_AF=0.4816;SITEPOST=0.98875;SVTYPE=DEL	GT	0|1
4	163394004	BI_GS_DEL1_B1_P0857_291	G	<CN0>	100	PASS	AC=1513;AF=0.302117;AFR_AF=0.1036;AMR_AF=0.4265;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5278;END=163396424;EUR_AF=0.2396;MC=YL_CN_FIN_1019,EM_DL_DEL74739,SI_BD_4944,YL_CN_ACB_1227,UW_VH_1749;NS=2504;SAS_AF=0.3139;SVTYPE=DEL	GT	1|0
4	164501940	DEL_pindel_13878	AAGTATTAAAGTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2059;AF=0.411142;AFR_AF=0.4077;AMR_AF=0.4251;AN=5008;CS=DEL_pindel;EAS_AF=0.4683;END=164502253;EUR_AF=0.3787;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3804;SITEPOST=0.9976;SVTYPE=DEL_ALU	GT	1|0
4	166002564	SI_BD_4967	C	<CN0>	100	PASS	AC=4139;AF=0.826478;AFR_AF=0.5832;AMR_AF=0.8876;AN=5008;CIEND=-50,293;CIPOS=-293,87;CS=DEL_union;EAS_AF=0.9375;END=166005042;EUR_AF=0.9225;MC=UW_VH_1977,YL_CN_ESN_1134,UW_VH_11097,UW_VH_19288,UW_VH_5359,UW_VH_22057,UW_VH_3878,UW_VH_11179,UW_VH_4803,YL_CN_BEB_908,BI_GS_DEL1_B1_P0860_1,UW_VH_21013,UW_VH_18994,UW_VH_17478,EM_DL_DEL74800,UW_VH_24004,UW_VH_3300;NS=2504;SAS_AF=0.8988;SVTYPE=DEL	GT	1|1
4	167004317	BI_GS_DEL1_B1_P0861_4	G	<CN0>	100	PASS	AC=1915;AF=0.382388;AFR_AF=0.0719;AMR_AF=0.5288;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4673;END=167004917;EUR_AF=0.4712;NS=2504;SAS_AF=0.5194;SVTYPE=DEL	GT	1|1
4	167669354	SI_BD_4975	G	<CN0>	100	PASS	AC=1042;AF=0.208067;AFR_AF=0.4516;AMR_AF=0.1326;AN=5008;CIEND=-57,206;CIPOS=-206,50;CS=DEL_union;EAS_AF=0.0506;END=167670581;EUR_AF=0.1829;MC=YL_CN_MSL_997,BI_GS_DEL1_B1_P0861_489,YL_CN_ESN_1136;NS=2504;SAS_AF=0.1207;SVTYPE=DEL	GT	0|1
4	168806478	DEL_pindel_13956	GCAGGTAGCTTTTGTATCTTTGTAGCTATCTTATTTAGGAATAGAATGGAAGGCAGGTTTGCCCCATGCAATTCCCAGCTTGACTTTTCCCTTTGGCTTAGTGATTTTGCAGT	G	.	PASS	AC=414;AF=0.0826677;AFR_AF=0.0393;AMR_AF=0.1009;AN=5008;CS=DEL_pindel;EAS_AF=0.0417;END=168806590;EUR_AF=0.172;NS=2504;SAS_AF=0.0787;SITEPOST=0.9988;SVTYPE=DEL	GT	0|1
4	170278462	BI_GS_DEL1_B5_P0864_357	T	<CN0>	100	PASS	AC=2484;AF=0.496006;AFR_AF=0.2133;AMR_AF=0.6686;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.75;END=170278879;EUR_AF=0.502;MC=UW_VH_440,DEL_pindel_13975;NS=2504;SAS_AF=0.4877;SVTYPE=DEL	GT	1|0
4	172374434	SI_BD_5006	C	<CN0>	100	PASS	AC=3316;AF=0.662141;AFR_AF=0.3472;AMR_AF=0.7853;AN=5008;CIEND=-75,312;CIPOS=-312,50;CS=DEL_union;EAS_AF=0.8651;END=172379470;EUR_AF=0.7495;MC=UW_VH_441,UW_VH_20350,UW_VH_4690,EM_DL_DEL75061,UW_VH_4655,YL_CN_LWK_1070;NS=2504;SAS_AF=0.7014;SVTYPE=DEL	GT	1|0
4	172988631	UW_VH_25120	A	<CN0>	100	PASS	AC=2048;AF=0.408946;AFR_AF=0.4849;AMR_AF=0.5072;AN=5008;CIEND=0,343;CIPOS=-339,0;CS=DEL_union;EAS_AF=0.2073;END=172992933;EUR_AF=0.505;MC=YL_CN_CDX_936,UW_VH_9065,UW_VH_442,UW_VH_17158,UW_VH_15800,BI_GS_DEL1_B1_P0866_761,EM_DL_DEL75073,UW_VH_4730,UW_VH_6522,UW_VH_20733,UW_VH_17716,UW_VH_18538,SI_BD_5015;NS=2504;SAS_AF=0.3456;SVTYPE=DEL	GT	0|1
4	173176433	DEL_pindel_14001	TTTCATTGACATTTATTTTTTAAATCACTGTGCTGAGAAGTAGACAGAAAAATCA	T	.	PASS	AC=1416;AF=0.282748;AFR_AF=0.2943;AMR_AF=0.3545;AN=5008;CS=DEL_pindel;EAS_AF=0.1528;END=173176487;EUR_AF=0.3748;NS=2504;SAS_AF=0.2556;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
4	173425034	BI_GS_DEL1_B1_P0867_301	A	<CN0>	100	PASS	AC=4143;AF=0.827276;AFR_AF=0.6271;AMR_AF=0.8804;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9891;END=173433521;EUR_AF=0.8022;MC=EM_DL_DEL75082,UW_VH_24951,UW_VH_13779,UW_VH_3953,UW_VH_5240,UW_VH_5648,UW_VH_20909,YL_CN_YRI_1407,UW_VH_2658,SI_BD_5016;NS=2504;SAS_AF=0.9192;SVTYPE=DEL	GT	1|1
4	174044228	ALU_umary_ALU_3943	T	<INS:ME:ALU>	.	.	AC=1240;AF=0.247604;AFR_AF=0.0605;AMR_AF=0.3934;AN=5008;CS=ALU_umary;EAS_AF=0.1855;EUR_AF=0.4006;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.3037;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TATTACTGCTTTTT	GT	0|1
4	174149455	ALU_umary_ALU_3944	T	<INS:ME:ALU>	.	.	AC=1310;AF=0.261581;AFR_AF=0.1142;AMR_AF=0.1816;AN=5008;CS=ALU_umary;EAS_AF=0.4157;EUR_AF=0.3221;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.2965;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CTTCTAGTCATTTCT	GT	1|0
4	178156827	DEL_pindel_14109	TAAGTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=4748;AF=0.948083;AFR_AF=0.9266;AMR_AF=0.938;AN=5008;CS=DEL_pindel;EAS_AF=0.9603;END=178157156;EUR_AF=0.9602;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.9591;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|1
4	180063822	BI_GS_DEL1_B4_P0874_17	C	<CN0>	100	PASS	AC=2658;AF=0.530751;AFR_AF=0.5613;AMR_AF=0.5476;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7242;END=180064151;EUR_AF=0.2913;NS=2504;SAS_AF=0.5245;SVTYPE=DEL	GT	0|1
4	180097876	DEL_pindel_14142	AATTATTGTTAACTTTTGTCACCCTACTGTGCTGTTGAACACTTTTCTAACTGTATTTTTGGACCCATTAAACAATTCTCTTTATTACTCCTCCTTCCTATTCTTTGCAACTGCTGGTAACCATCATTATACTCTCTACCTTCGTGAGATAATTTTTTTTTAATTCCCACATATGAATGAGAACATGCGATATTCATCTTTCAATGCCTGGCTTATTTCATTTACATAATGCCCACCAGTTCTATGTTGCTACAAATAACAGCATTTCTGTCTTTTCTACGGCTGAATAATATTTCATTTTATATATATAAAAAAAAAATTTCTTTATTCATTCAACTGTTGATGAACACAAGCGGCTTCCACATCTTGGCTATTATAAATAGTGCTGTAATAAACATGGAAGTACAGATGTCTCTCTAATATACTGATTTCCTTTCTTTTGGATATATACCCAGCAGTTAGACTGTTGAATTTTATGGTGATTAATTTTTTTTAATTTTTGAGGAAGCTTCATGCTATTTTCCATTGTGGTGTACTAATTTACAATCCCACCAATGACATATGAGCATTCTTTTTTCTCTTCATTCTTGCCAACATTTCTTATTTTCTGTTGTTTTGATAATAGCTATTCT	A	.	PASS	AC=939;AF=0.1875;AFR_AF=0.1967;AMR_AF=0.1758;AN=5008;CS=DEL_pindel;EAS_AF=0.1448;END=180098507;EUR_AF=0.2286;NS=2504;SAS_AF=0.1851;SITEPOST=0.9994;SVTYPE=DEL	GT	0|1
4	180256972	ALU_umary_ALU_3976	T	<INS:ME:ALU>	.	.	AC=2137;AF=0.426717;AFR_AF=0.4697;AMR_AF=0.3098;AN=5008;CS=ALU_umary;EAS_AF=0.3353;EUR_AF=0.5388;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4305;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TAAATCAAATTTCTTATT	GT	1|1
4	180600174	DEL_pindel_14147	AGTGTATATATATGTACACACATATATATGTGTATATATATGTACACACATATATATGTGTATATATATGTACACACATATATGT	A	.	PASS	AC=1503;AF=0.30012;AFR_AF=0.267;AMR_AF=0.3184;AN=5008;CS=DEL_pindel;EAS_AF=0.2857;END=180600258;EUR_AF=0.3221;NS=2504;SAS_AF=0.3241;SITEPOST=0.9861;SVTYPE=DEL	GT	1|0
4	181317271	DEL_pindel_14173	AACAGGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCTACC	A	.	PASS	AC=3266;AF=0.652157;AFR_AF=0.5825;AMR_AF=0.7133;AN=5008;CS=DEL_pindel;EAS_AF=0.6409;END=181317454;EUR_AF=0.6819;MEINFO=AluYc,145,281,-;NS=2504;SAS_AF=0.684;SITEPOST=0.9617;SVTYPE=DEL_ALU	GT	1|0
4	181503039	ALU_umary_ALU_3981	T	<INS:ME:ALU>	.	.	AC=394;AF=0.0786741;AFR_AF=0.0045;AMR_AF=0.0937;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.2187;MEINFO=AluYa5a2,2,281,-;NS=2504;SAS_AF=0.1043;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AATGCTTATTTTT	GT	0|1
4	181549428	DEL_pindel_14182	TCTGTGTCTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2874;AF=0.573882;AFR_AF=0.5938;AMR_AF=0.5879;AN=5008;CS=DEL_pindel;EAS_AF=0.4296;END=181549742;EUR_AF=0.6203;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.638;SITEPOST=0.9948;SVTYPE=DEL_ALU	GT	1|1
4	182056564	BI_GS_DEL1_B3_P0876_6	T	<CN0>	100	PASS	AC=2404;AF=0.480032;AFR_AF=0.1936;AMR_AF=0.5677;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.751;END=182057129;EUR_AF=0.5676;MC=SI_BD_5073;NS=2504;SAS_AF=0.4356;SVTYPE=DEL	GT	1|0
4	183570005	UW_VH_4307	T	<CN0>	100	PASS	AC=411;AF=0.0820687;AFR_AF=0.0061;AMR_AF=0.0663;AN=5008;CIEND=0,153;CIPOS=-41,0;CS=DEL_union;EAS_AF=0.1339;END=183571998;EUR_AF=0.0755;MC=YL_CN_CEU_1372,BI_GS_DEL1_B4_P0877_133,EM_DL_DEL10827429;NS=2504;SAS_AF=0.1493;SVTYPE=DEL	GT	0|1
4	184303686	DEL_pindel_14250	TAACATAGCACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3514;AF=0.701677;AFR_AF=0.6278;AMR_AF=0.7233;AN=5008;CS=DEL_pindel;EAS_AF=0.7232;END=184304009;EUR_AF=0.7386;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.726;SITEPOST=0.95575;SVTYPE=DEL_ALU	GT	0|1
4	185665771	DEL_pindel_14281	TCTAAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=3541;AF=0.707069;AFR_AF=0.7005;AMR_AF=0.7118;AN=5008;CS=DEL_pindel;EAS_AF=0.7192;END=185666089;EUR_AF=0.7107;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.6963;SITEPOST=0.935;SVTYPE=DEL_ALU	GT	0|1
4	185977809	ALU_umary_ALU_3999	T	<INS:ME:ALU>	.	.	AC=1732;AF=0.345847;AFR_AF=0.4675;AMR_AF=0.2997;AN=5008;CS=ALU_umary;EAS_AF=0.4087;EUR_AF=0.2445;MEINFO=AluUndef,4,281,-;NS=2504;SAS_AF=0.2536;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=CTGAATTTT	GT	0|1
4	186382160	ALU_umary_ALU_4001	T	<INS:ME:ALU>	.	.	AC=1537;AF=0.306909;AFR_AF=0.2254;AMR_AF=0.2925;AN=5008;CS=ALU_umary;EAS_AF=0.2391;EUR_AF=0.4254;MEINFO=AluUndef,15,268,-;NS=2504;SAS_AF=0.3753;SITEPOST=1;SVLEN=253;SVTYPE=ALU;TSD=GGTAGTCACGTTTT	GT	0|1
4	186441632	BI_GS_DEL1_B2_P0880_294	T	<CN0>	100	PASS	AC=3178;AF=0.634585;AFR_AF=0.1906;AMR_AF=0.7839;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8105;END=186444075;EUR_AF=0.8439;MC=UW_VH_6680,UW_VH_452,UW_VH_4848,SI_BD_5108,YL_CN_LWK_1085,EM_DL_DEL75360,UW_VH_24773,UW_VH_6455,UW_VH_4987,UW_VH_13738;NS=2504;SAS_AF=0.7321;SVTYPE=DEL	GT	0|1
4	187093487	ALU_umary_ALU_4005	C	<INS:ME:ALU>	.	.	AC=1443;AF=0.288139;AFR_AF=0.1868;AMR_AF=0.3386;AN=5008;CS=ALU_umary;EAS_AF=0.2341;EUR_AF=0.4612;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2669;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0|1
4	187093487	UW_VH_3645	C	<CN0>	100	PASS	AC=1930;AF=0.385383;AFR_AF=0.2564;AMR_AF=0.451;AN=5008;CIEND=0,166;CIPOS=-156,0;CS=DEL_union;EAS_AF=0.2956;END=187098252;EUR_AF=0.6014;MC=YL_CN_CDX_950,YL_CN_GBR_1048,EM_DL_DEL75377,BI_GS_DEL1_B1_P0881_74;NS=2504;SAS_AF=0.3834;SVTYPE=DEL	GT	1|1
4	187795697	DEL_pindel_14332	GCAACAAATTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTGGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=3479;AF=0.694688;AFR_AF=0.6861;AMR_AF=0.6844;AN=5008;CS=DEL_pindel;EAS_AF=0.7113;END=187796017;EUR_AF=0.6928;MEINFO=AluYa4_4,2,281,-;NS=2504;SAS_AF=0.6984;SITEPOST=0.9614;SVTYPE=DEL_ALU	GT	1|1
4	188200037	ALU_umary_ALU_4010	C	<INS:ME:ALU>	.	.	AC=556;AF=0.111022;AFR_AF=0.1354;AMR_AF=0.1037;AN=5008;CS=ALU_umary;EAS_AF=0.1518;EUR_AF=0.0974;MEINFO=AluYa5,2,254,+;NS=2504;SAS_AF=0.0552;SITEPOST=1;SVLEN=252;SVTYPE=ALU;TSD=AAAAAATCGC	GT	0|1
4	188959366	DEL_pindel_14367	ATCAAATTGCCTTTTTGTTTTGCTAATATTTAATACTCATGATAAAAAGATTTTAGACTGTAGCAGGTTTTTCTTTTTAACCCTGGTTATATTATTTGGCATGATTCAGATGTTGAAGTAGCC	A	.	PASS	AC=1605;AF=0.320487;AFR_AF=0.2141;AMR_AF=0.4481;AN=5008;CS=DEL_pindel;EAS_AF=0.1329;END=188959488;EUR_AF=0.5825;NS=2504;SAS_AF=0.2975;SITEPOST=0.9946;SVTYPE=DEL	GT	0|1
4	189793239	DEL_pindel_14388	TGAAAGTACTGGATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGCAGTGACAGGCGCCTGTGGTCCCAGCTACTCGGGTCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTCGCAGTGAGCCGAGATCGCGCCCCTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAGAAAAAAAAAAA	T	.	PASS	AC=2163;AF=0.431909;AFR_AF=0.379;AMR_AF=0.5144;AN=5008;CS=DEL_pindel;EAS_AF=0.254;END=189793558;EUR_AF=0.5736;MEINFO=AluYa3_1,1,281,+;NS=2504;SAS_AF=0.4826;SITEPOST=0.9991;SVTYPE=DEL_ALU	GT	1|1
4	189969676	DEL_pindel_14391	TGAGCATGCTAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCCCGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3293;AF=0.657548;AFR_AF=0.6581;AMR_AF=0.6599;AN=5008;CS=DEL_pindel;EAS_AF=0.6448;END=189970030;EUR_AF=0.671;MEINFO=AluYb5,1,281,-;NS=2504;SAS_AF=0.6544;SITEPOST=0.96125;SVTYPE=DEL_ALU	GT	0|1
4	190058006	BI_GS_DEL1_B1_P0884_52	A	<CN0>	100	PASS	AC=2955;AF=0.590056;AFR_AF=0.4592;AMR_AF=0.621;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6488;END=190064283;EUR_AF=0.7078;MC=SI_BD_5163,UW_VH_2786;MEINFO=LINE1,341,389,+;NS=2504;SAS_AF=0.5634;SVTYPE=DEL_LINE1	GT	1|1
4	190105408	EM_DL_DEL10831050	C	<CN0>	100	PASS	AC=4633;AF=0.92512;AFR_AF=0.8608;AMR_AF=0.9467;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.994;END=190106160;EUR_AF=0.9245;NS=2504;SAS_AF=0.9264;SVTYPE=DEL	GT	1|1
4	190253838	DEL_pindel_14394	TGAACAGATACTTCTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3854;AF=0.769569;AFR_AF=0.7489;AMR_AF=0.7781;AN=5008;CS=DEL_pindel;EAS_AF=0.8026;END=190254160;EUR_AF=0.7763;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7505;SITEPOST=0.96465;SVTYPE=DEL_ALU	GT	1|1
4	190291418	DEL_pindel_14395	TCGGAGTCATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCTGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCGCGCCACCACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3405;AF=0.679912;AFR_AF=0.5923;AMR_AF=0.634;AN=5008;CS=DEL_pindel;EAS_AF=0.7917;END=190291737;EUR_AF=0.672;MEINFO=AluY,1,281,-;NS=2504;SAS_AF=0.7239;SITEPOST=0.9904;SVTYPE=DEL_ALU	GT	0|1
4	190302417	BI_GS_DEL1_B4_P0884_66	A	<CN0>	100	PASS	AC=4246;AF=0.847843;AFR_AF=0.6664;AMR_AF=0.8357;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9692;END=190302714;EUR_AF=0.8926;MC=BI_GS_DEL1_B5_P0884_316;NS=2504;SAS_AF=0.9305;SVTYPE=DEL	GT	1|1
5	167619	ALU_umary_ALU_4026	G	<INS:ME:ALU>	.	.	AC=212;AF=0.0423323;AFR_AF=0.0076;AMR_AF=0.0605;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.1103;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.0481;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGGAGGTTGGGGG	GT	0|1
5	608881	DEL_pindel_14434	TGTGGGAGCGTGCGCTGGGATGGGGAGGGGTCACTGTGAGCACGGTGCGTC	T	.	PASS	AC=1691;AF=0.33766;AFR_AF=0.3313;AMR_AF=0.3617;AN=5008;CS=DEL_pindel;EAS_AF=0.2361;END=608931;EUR_AF=0.4016;NS=2504;SAS_AF=0.3681;SITEPOST=0.9888;SVTYPE=DEL	GT	0|1
5	1022803	YL_CN_ESN_1200	C	<CN0>	100	PASS	AC=4515;AF=0.901558;AFR_AF=0.6498;AMR_AF=0.9669;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.997;END=1025877;EUR_AF=0.997;NS=2504;SAS_AF=0.999;SVTYPE=DEL	GT	1|1
5	1585517	ALU_umary_ALU_4031	A	<INS:ME:ALU>	.	.	AC=1360;AF=0.271565;AFR_AF=0.1989;AMR_AF=0.2997;AN=5008;CS=ALU_umary;EAS_AF=0.2351;EUR_AF=0.3469;MEINFO=AluYc1,1,279,+;NS=2504;SAS_AF=0.3098;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAGAGACCCTCTCTA	GT	0|1
5	1627140	BI_GS_DEL1_B5_P0887_523	A	<CN0>	100	PASS	AC=1150;AF=0.229633;AFR_AF=0.3858;AMR_AF=0.1772;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1369;END=1628837;EUR_AF=0.2376;NS=2504;SAS_AF=0.1431;SVTYPE=DEL	GT	0|1
5	1812652	ALU_umary_ALU_4032	T	<INS:ME:ALU>	.	.	AC=1406;AF=0.280751;AFR_AF=0.177;AMR_AF=0.3775;AN=5008;CS=ALU_umary;EAS_AF=0.1885;EUR_AF=0.3847;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3405;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GACTCCTCTTTT	GT	1|0
5	1924587	BI_GS_DEL1_B3_P0887_48	G	<CN0>	100	PASS	AC=3647;AF=0.728235;AFR_AF=0.8442;AMR_AF=0.7017;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5794;END=1925201;EUR_AF=0.8121;NS=2504;SAS_AF=0.6575;SVTYPE=DEL	GT	1|0
5	3995199	ALU_umary_ALU_4040	C	<INS:ME:ALU>	.	.	AC=2275;AF=0.454273;AFR_AF=0.3699;AMR_AF=0.4337;AN=5008;CS=ALU_umary;EAS_AF=0.5536;EUR_AF=0.4831;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4509;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAAACGACAGAAATC	GT	1|0
5	4459411	DEL_pindel_14539	TATCATATGTATATGATATATATACATACATATATATCATATGTATATGATATATATACATACATATATATC	T	.	PASS	AC=4235;AF=0.845647;AFR_AF=0.5008;AMR_AF=0.9481;AN=5008;CS=DEL_pindel;EAS_AF=0.9782;END=4459482;EUR_AF=0.9771;NS=2504;SAS_AF=0.9673;SITEPOST=0.9999;SVTYPE=DEL	GT	1|1
5	5595248	ALU_umary_ALU_4048	T	<INS:ME:ALU>	.	.	AC=2594;AF=0.517971;AFR_AF=0.5575;AMR_AF=0.4899;AN=5008;CS=ALU_umary;EAS_AF=0.4851;EUR_AF=0.5159;MEINFO=AluUndef,1,274,-;NS=2504;SAS_AF=0.5204;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=GACTTTTT	GT	1|0
5	7221928	DEL_pindel_14582	TCCATATGCAGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCAGCC	T	.	PASS	AC=2952;AF=0.589457;AFR_AF=0.6755;AMR_AF=0.5821;AN=5008;CS=DEL_pindel;EAS_AF=0.5347;END=7222248;EUR_AF=0.5278;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5982;SITEPOST=0.9793;SVTYPE=DEL_ALU	GT	1|0
5	8749528	L1_umary_LINE1_1049	G	<INS:ME:LINE1>	.	.	AC=1853;AF=0.370008;AFR_AF=0.1112;AMR_AF=0.4942;AN=5008;CS=L1_umary;EAS_AF=0.5387;EUR_AF=0.4264;MEINFO=LINE1,4274,5992,+;NS=2504;SAS_AF=0.3998;SITEPOST=1;SVLEN=1718;SVTYPE=LINE1;TSD=AAAATTTTTTAATG	GT	1|1
5	9411760	DEL_pindel_14628	TAAAAATTAATCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3390;AF=0.676917;AFR_AF=0.6543;AMR_AF=0.6744;AN=5008;CS=DEL_pindel;EAS_AF=0.6915;END=9412074;EUR_AF=0.6948;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6759;SITEPOST=0.9601;SVTYPE=DEL_ALU	GT	0|1
5	10273288	EM_DL_DEL75971	T	<CN0>	100	PASS	AC=1995;AF=0.398363;AFR_AF=0.3767;AMR_AF=0.4611;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0774;END=10275414;EUR_AF=0.6948;MC=YL_CN_PUR_1377,YL_CN_CEU_1455,UW_VH_19702,YL_CN_GBR_1108;NS=2504;SAS_AF=0.409;SVTYPE=DEL	GT	1|0
5	10574959	BI_GS_DEL1_B4_P0896_114	A	<CN0>	100	PASS	AC=3815;AF=0.761781;AFR_AF=0.4697;AMR_AF=0.8746;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8948;END=10575294;EUR_AF=0.8608;NS=2504;SAS_AF=0.8374;SVTYPE=DEL	GT	1|1
5	10756185	BI_GS_DEL1_B1_P0896_726	A	<CN0>	100	PASS	AC=1179;AF=0.235423;AFR_AF=0.2958;AMR_AF=0.1744;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2361;END=10756522;EUR_AF=0.2107;MC=DEL_pindel_14671,UW_VH_461;NS=2504;SAS_AF=0.2219;SVTYPE=DEL	GT	1|0
5	13399958	DEL_pindel_14735	GATGCCTCTTTGGATCACCACTGATTTTCAGGGTCAGTGCTGTCATCTTTGCTTTAGCCACCATCTAACTGAGCC	G	.	PASS	AC=823;AF=0.164337;AFR_AF=0.2088;AMR_AF=0.1585;AN=5008;CS=DEL_pindel;EAS_AF=0.124;END=13400032;EUR_AF=0.171;NS=2504;SAS_AF=0.1431;SITEPOST=0.99995;SVTYPE=DEL	GT	1|1
5	16525366	DEL_pindel_14795	GGCCCCAACAGGTGGATGTGCGCGGGGGGACACTGTGCTGATTTGCGTCCTCCA	G	.	PASS	AC=1051;AF=0.209864;AFR_AF=0.1876;AMR_AF=0.0893;AN=5008;CS=DEL_pindel;EAS_AF=0.2847;END=16525419;EUR_AF=0.1869;NS=2504;SAS_AF=0.272;SITEPOST=0.9987;SVTYPE=DEL	GT	1|0
5	17712622	ALU_umary_ALU_4115	G	<INS:ME:ALU>	.	.	AC=1830;AF=0.365415;AFR_AF=0.2413;AMR_AF=0.3458;AN=5008;CS=ALU_umary;EAS_AF=0.3224;EUR_AF=0.5239;MEINFO=AluYa5,14,281,+;NS=2504;SAS_AF=0.4284;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=AGAAAAATATACACAAG	GT	1|0
5	18643248	UW_VH_4714	T	<CN0>	100	PASS	AC=9;AF=0.00179712;AFR_AF=0.0008;AMR_AF=0.0014;AN=5008;CIEND=0,100;CIPOS=-87,0;CS=DEL_union;EAS_AF=0;END=18648493;EUR_AF=0.007;MC=BI_GS_DEL1_B1_P0904_513,SI_BD_5384;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	1|0
5	21651568	DEL_pindel_14912	AAAAATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCTCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCG	A	.	PASS	AC=1585;AF=0.316494;AFR_AF=0.5522;AMR_AF=0.1585;AN=5008;CS=DEL_pindel;EAS_AF=0.3462;END=21651891;EUR_AF=0.1879;MEINFO=AluYa4_3,1,281,-;NS=2504;SAS_AF=0.2117;SITEPOST=0.99405;SVTYPE=DEL_ALU	GT	1|1
5	23903003	BI_GS_DEL1_B4_P0909_180	C	<CN0>	100	PASS	AC=1907;AF=0.380791;AFR_AF=0.348;AMR_AF=0.4006;AN=5008;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0.2986;END=23905242;EUR_AF=0.496;MC=YL_CN_FIN_1129,EM_DL_DEL76319,YL_CN_ASW_1247;NS=2504;SAS_AF=0.3773;SVTYPE=DEL	GT	0|1
5	24452839	DEL_pindel_14973	TAAGAAAACAATAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3026;AF=0.604233;AFR_AF=0.6286;AMR_AF=0.6686;AN=5008;CS=DEL_pindel;EAS_AF=0.4256;END=24453161;EUR_AF=0.6938;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6176;SITEPOST=0.9735;SVTYPE=DEL_ALU	GT	0|1
5	25653044	DEL_pindel_14997	GGAATTTACTCATTTCATCTAGATTTTCTAGTTTATTTGCATAGAGGTATTTATGGTGTTCTCTGATGGTAGTTTGAATTTCTATGGGATCAGTGGTAATATCCCCTTCATCATTTTTTATTATATCTATTTGATTCTTCTCTCTTCTTTATTGGTCTTGCTAGTGATCTATCAATTTTGTTGATCTTTTCAAAAAACCAGCTCCTGGATTCATTGATTCTTT	G	.	PASS	AC=103;AF=0.0205671;AFR_AF=0.0008;AMR_AF=0.0216;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=25653266;EUR_AF=0.0318;NS=2504;SAS_AF=0.0542;SITEPOST=0.987;SVTYPE=DEL	GT	0|1
5	25777306	DEL_pindel_15003	TTTTTCCCAGAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=4131;AF=0.82488;AFR_AF=0.7958;AMR_AF=0.8329;AN=5008;CS=DEL_pindel;EAS_AF=0.8294;END=25777630;EUR_AF=0.8499;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.8282;SITEPOST=0.9612;SVTYPE=DEL_ALU	GT	0|1
5	26111186	DEL_pindel_15012	TAAAACAATACATTACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGTCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3482;AF=0.695288;AFR_AF=0.7012;AMR_AF=0.6744;AN=5008;CS=DEL_pindel;EAS_AF=0.7163;END=26111512;EUR_AF=0.6998;MEINFO=AluYa4_4,1,281,+;NS=2504;SAS_AF=0.6759;SITEPOST=0.9548;SVTYPE=DEL_ALU	GT	1|1
5	31677424	DEL_pindel_15115	TAAAAAGGAGGTATATCCGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCGGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAGCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTTAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3607;AF=0.720248;AFR_AF=0.6558;AMR_AF=0.7334;AN=5008;CS=DEL_pindel;EAS_AF=0.7321;END=31677745;EUR_AF=0.7644;MEINFO=AluY,1,280,+;NS=2504;SAS_AF=0.7403;SITEPOST=0.96925;SVTYPE=DEL_ALU	GT	1|0
5	32338582	NUMT_umich_142	G	<INS:MT>	178	PASS	AC=2052;AF=0.409744;AFR_AF=0.3222;AMR_AF=0.451;AN=5008;CIEND=-3,0;CIPOS=0,3;CS=NUMT_umich;EAS_AF=0.4256;END=32338584;EUR_AF=0.4384;MEND=14988;MLEN=2275;MSTART=12714;NS=2504;SAS_AF=0.453;SVTYPE=INS	GT	0|1
5	32762578	ALU_umary_ALU_4195	T	<INS:ME:ALU>	.	.	AC=926;AF=0.184904;AFR_AF=0.0234;AMR_AF=0.1787;AN=5008;CS=ALU_umary;EAS_AF=0.3542;EUR_AF=0.2416;MEINFO=AluUndef,1,255,-;NS=2504;SAS_AF=0.1748;SITEPOST=1;SVLEN=254;SVTYPE=ALU;TSD=TGTTTCCTGATTTTTT	GT	0|1
5	33355563	DEL_pindel_15154	TTTAACACATTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2402;AF=0.479633;AFR_AF=0.5333;AMR_AF=0.4236;AN=5008;CS=DEL_pindel;EAS_AF=0.255;END=33355894;EUR_AF=0.6233;MEINFO=AluYb5,1,281,-;NS=2504;SAS_AF=0.5307;SITEPOST=0.9968;SVTYPE=DEL_ALU	GT	1|0
5	33633348	L1_umary_LINE1_1089	T	<INS:ME:LINE1>	.	.	AC=2939;AF=0.586861;AFR_AF=0.4312;AMR_AF=0.6744;AN=5008;CS=L1_umary;EAS_AF=0.623;EUR_AF=0.7276;MEINFO=LINE1,5262,6001,-;NS=2504;SAS_AF=0.5532;SITEPOST=1;SVLEN=739;SVTYPE=LINE1;TSD=GAAAAGTCTTCTTT	GT	0|1
5	34113270	ALU_umary_ALU_4205	G	<INS:ME:ALU>	.	.	AC=1487;AF=0.296925;AFR_AF=0.1407;AMR_AF=0.3559;AN=5008;CS=ALU_umary;EAS_AF=0.2887;EUR_AF=0.4006;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.3681;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAATATTTAAAGTTTCTG	GT	0|1
5	35196137	DEL_pindel_15194	TAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	T	.	PASS	AC=2321;AF=0.463458;AFR_AF=0.5068;AMR_AF=0.4582;AN=5008;CS=DEL_pindel;EAS_AF=0.3294;END=35196187;EUR_AF=0.5239;NS=2504;SAS_AF=0.4847;SITEPOST=0.994;SVTYPE=DEL	GT	1|0
5	35614173	DEL_pindel_15207	TAAAAAATTGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1899;AF=0.379193;AFR_AF=0.3933;AMR_AF=0.3804;AN=5008;CS=DEL_pindel;EAS_AF=0.4425;END=35614486;EUR_AF=0.2048;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.4734;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	0|1
5	35672335	DEL_pindel_15210	GTTCATTATAATGTTATTGAACATAATGTTCATTATAATGTTATTGAACATTATATATAA	G	.	PASS	AC=1925;AF=0.384385;AFR_AF=0.4002;AMR_AF=0.3862;AN=5008;CS=DEL_pindel;EAS_AF=0.371;END=35672394;EUR_AF=0.3757;NS=2504;SAS_AF=0.3845;SITEPOST=0.9962;SVTYPE=DEL	GT	1|0
5	37293799	DEL_pindel_15233	TTAAAGCAAATGATGATTCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACGCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1293;AF=0.258187;AFR_AF=0.531;AMR_AF=0.2032;AN=5008;CS=DEL_pindel;EAS_AF=0.1171;END=37294130;EUR_AF=0.1392;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.1963;SITEPOST=0.99865;SVTYPE=DEL_ALU	GT	0|1
5	40181658	ALU_umary_ALU_4230	T	<INS:ME:ALU>	.	.	AC=2163;AF=0.431909;AFR_AF=0.354;AMR_AF=0.4294;AN=5008;CS=ALU_umary;EAS_AF=0.255;EUR_AF=0.5706;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.5787;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AACACTTTT	GT	1|1
5	42628418	SI_BD_5524	G	<CN0>	100	PASS	AC=1544;AF=0.308307;AFR_AF=0.4539;AMR_AF=0.2594;AN=5008;CIEND=-50,226;CIPOS=-226,50;CS=DEL_union;EAS_AF=0.2034;END=42631130;EUR_AF=0.3052;MC=YL_CN_GBR_1142,UW_VH_2553,UW_VH_4534,YL_CN_KHV_1228,BI_GS_DEL1_B1_P0928_583;NS=2504;SAS_AF=0.2577;SVTYPE=DEL	GT	1|0
5	43516480	DEL_pindel_15335	ACCGGAAAAAGGAAGAAAGCCTCAGATGGGCATGTGTATAAATCCATAAAATCACTGTGTGTGCTCACTT	A	.	PASS	AC=2271;AF=0.453474;AFR_AF=0.0946;AMR_AF=0.5634;AN=5008;CS=DEL_pindel;EAS_AF=0.753;END=43516549;EUR_AF=0.4215;NS=2504;SAS_AF=0.5849;SITEPOST=0.9993;SVTYPE=DEL	GT	1|1
5	44125522	DEL_pindel_15348	AGACAAGGATGCTCACTCTCATTACTTCTATTCAACATAGTACTGAAAGTCCTAGCCAGAGCAATCAGACAAGAGAAAGTAATAAAGGACATCCAAATTGATAAAGAGGAAGTCAAACTGTCACTGCTTGCTGATGATATTATTGTTTACATAGAAAACACTAAAGACTCCTCCAGAAAGCTTCTAGAACT	A	.	PASS	AC=481;AF=0.0960463;AFR_AF=0.0696;AMR_AF=0.1614;AN=5008;CS=DEL_pindel;EAS_AF=0.1885;END=44125712;EUR_AF=0.0795;NS=2504;SAS_AF=0.0072;SITEPOST=0.9986;SVTYPE=DEL	GT	0|1
5	46144216	BI_GS_DEL1_B1_P0932_46	C	<CN0>	100	PASS	AC=1814;AF=0.36222;AFR_AF=0.351;AMR_AF=0.2997;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.4692;END=46145986;EUR_AF=0.3191;MC=YL_CN_CHB_1221,YL_CN_KHV_1237,YL_CN_CHS_1215,YL_CN_STU_1185,YL_CN_GBR_1147,YL_CN_BEB_1044;NS=2504;SAS_AF=0.3558;SVTYPE=DEL	GT	1|0
5	49480966	BI_GS_DEL1_B3_P0935_4	G	<CN0>	100	PASS	AC=515;AF=0.102835;AFR_AF=0.1717;AMR_AF=0.0865;AN=5008;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.001;END=49482003;EUR_AF=0.1133;NS=2504;SAS_AF=0.1155;SVTYPE=DEL	GT	0|1
5	53176928	DEL_pindel_15418	TAAAACCAGCTCCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA	T	.	PASS	AC=3213;AF=0.641573;AFR_AF=0.6112;AMR_AF=0.7882;AN=5008;CS=DEL_pindel;EAS_AF=0.4792;END=53177233;EUR_AF=0.7584;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6258;SITEPOST=0.9864;SVTYPE=DEL_ALU	GT	1|1
5	53755531	DEL_pindel_15432	TGTCTCAAAAAACAAAACAAAACAAAAATAAAAAACAAGAGAGAGAGAAACATTACAAAGGAGTGGGGAGGGCATAGAGGCACTGCAAA	T	.	PASS	AC=3938;AF=0.786342;AFR_AF=0.7988;AMR_AF=0.8012;AN=5008;CS=DEL_pindel;EAS_AF=0.7887;END=53755619;EUR_AF=0.7664;NS=2504;SAS_AF=0.7771;SITEPOST=0.9998;SVTYPE=DEL	GT	1|1
5	55429225	UW_VH_478	C	<CN0>	100	PASS	AC=2063;AF=0.411941;AFR_AF=0.3185;AMR_AF=0.3818;AN=5008;CIEND=0,506;CIPOS=-617,0;CS=DEL_union;EAS_AF=0.4345;END=55430342;EUR_AF=0.5159;MC=YL_CN_ITU_1185,YL_CN_FIN_1154,YL_CN_YRI_1567,YL_CN_MSL_1142,YL_CN_STU_1191,YL_CN_GWD_1680,YL_CN_JPT_1333,BI_GS_DEL1_B1_P0941_330,YL_CN_PUR_1444,SI_BD_5569;NS=2504;SAS_AF=0.4294;SVTYPE=DEL	GT	1|0
5	55870781	DEL_pindel_15479	ATGCTGGTGTAAACAAACCTACTGCACTGCCGGTCCTATAAAAGTATAGCACAGGCCAGGCAAGGTGACTCATACCTATAATCCCAGAGCTTTGGGAGGCTCAGACAGGAGGACTGCTTGAGCCCAGGAGTTCAAATCCAACTTGGGGAACATAGCAAGAACCTGTCTACAAAAATTTTTTTAAAGTAGCCAGGTGTGCTGACACACACCTGTGGTCTCAGCTATTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGATAGAGGCTGCAGTGAATTATGATTGTACCCC	A	.	PASS	AC=298;AF=0.0595048;AFR_AF=0.1808;AMR_AF=0.036;AN=5008;CS=DEL_pindel;EAS_AF=0;END=55871076;EUR_AF=0.0169;NS=2504;SAS_AF=0.0174;SITEPOST=0.9993;SVTYPE=DEL	GT	0|1
5	55927980	ALU_umary_ALU_4293	A	<INS:ME:ALU>	.	.	AC=1177;AF=0.235024;AFR_AF=0.0522;AMR_AF=0.353;AN=5008;CS=ALU_umary;EAS_AF=0.129;EUR_AF=0.3777;MEINFO=AluYa5,10,281,+;NS=2504;SAS_AF=0.3609;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=AAAAGATACAGAGA	GT	0|1
5	57320371	DUP_uwash_chr5_57320371_57338133	C	<CN0>	.	PASS	AC=4338;AF=0.866214;AFR_AF=0.9191;AMR_AF=0.8487;AN=5008;CS=DUP_uwash;EAS_AF=0.8423;END=57338133;EUR_AF=0.7773;NS=2504;SAS_AF=0.9233;SITEPOST=1;SVTYPE=DEL	GT	1|1
5	57323407	SI_BD_5576	T	<CN0>	100	PASS	AC=4337;AF=0.866014;AFR_AF=0.9191;AMR_AF=0.8487;AN=5008;CIEND=-50,278;CIPOS=-278,92;CS=DEL_union;EAS_AF=0.8423;END=57333752;EUR_AF=0.7773;MC=UW_VH_4612,UW_VH_9067,UW_VH_1979,UW_VH_4283,YL_CN_ASW_1282,EM_DL_DEL77406,BI_GS_DEL1_B2_P0943_250,UW_VH_20463;NS=2504;SAS_AF=0.9223;SVTYPE=DEL	GT	1|1
5	57923170	DEL_pindel_15526	TAAACACAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1274;AF=0.254393;AFR_AF=0.2965;AMR_AF=0.3473;AN=5008;CS=DEL_pindel;EAS_AF=0.1786;END=57923343;EUR_AF=0.1869;MEINFO=AluYb,160,280,+;NS=2504;SAS_AF=0.2791;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	0|1
5	58274026	DEL_pindel_15532	AAGCCCAGGAGTTCAAGACCAGCCTGGTCAACATAGGGAGACCTCATCTCGACAAATAATAAAAAATTATCTGGGGATGGTAGGGCGTGCCTGTAGTCCCAGCTACTTGGGATGCTGAGGTAGGAGGATTGCTTG	A	.	PASS	AC=560;AF=0.111821;AFR_AF=0.1067;AMR_AF=0.1239;AN=5008;CS=DEL_pindel;EAS_AF=0.125;END=58274160;EUR_AF=0.1143;NS=2504;SAS_AF=0.0941;SITEPOST=0.99695;SVTYPE=DEL	GT	0|1
5	58277277	DEL_pindel_15534	AAAGTTAATACCTCTTATGTTATATAAGGGAATAAGAAAAAGAAAATGAAGAT	A	.	PASS	AC=2152;AF=0.429712;AFR_AF=0.4576;AMR_AF=0.4352;AN=5008;CS=DEL_pindel;EAS_AF=0.4107;END=58277329;EUR_AF=0.4175;NS=2504;SAS_AF=0.4202;SITEPOST=0.9954;SVTYPE=DEL	GT	0|1
5	60001696	SI_BD_5588	G	<CN0>	100	PASS	AC=2099;AF=0.419129;AFR_AF=0.2337;AMR_AF=0.5778;AN=5008;CIEND=-105,324;CIPOS=-324,59;CS=DEL_union;EAS_AF=0.5734;END=60003676;EUR_AF=0.5378;MC=YL_CN_KHV_1247,BI_GS_DEL1_B1_P0946_4,UW_VH_5649,UW_VH_2787,YL_CN_CLM_1030,YL_CN_PJL_1248;NS=2504;SAS_AF=0.2761;SVTYPE=DEL	GT	0|1
5	62687444	BI_GS_DEL1_B5_P0948_819	A	<CN0>	100	PASS	AC=3238;AF=0.646565;AFR_AF=0.385;AMR_AF=0.6931;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8591;END=62687711;EUR_AF=0.6183;MC=UW_VH_1754;NS=2504;SAS_AF=0.7771;SVTYPE=DEL	GT	0|1
5	62704438	DEL_pindel_15591	TGAAATATAAAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATGCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3406;AF=0.680112;AFR_AF=0.7012;AMR_AF=0.6556;AN=5008;CS=DEL_pindel;EAS_AF=0.7034;END=62704761;EUR_AF=0.6918;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6329;SITEPOST=0.9854;SVTYPE=DEL_ALU	GT	1|1
5	65346041	DEL_pindel_15661	ACTAAATCGAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=3144;AF=0.627796;AFR_AF=0.6679;AMR_AF=0.5764;AN=5008;CS=DEL_pindel;EAS_AF=0.4831;END=65346371;EUR_AF=0.6928;MEINFO=AluYa5a1,2,281,-;NS=2504;SAS_AF=0.6922;SITEPOST=0.98425;SVTYPE=DEL_ALU	GT	0|1
5	68105932	DEL_pindel_15729	GGGTGTGGCGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGATGGGAGGATCACTTGAGCCCAAGAATTTGAGACCAGCCTGGAAAACT	G	.	PASS	AC=1585;AF=0.316494;AFR_AF=0.2663;AMR_AF=0.3213;AN=5008;CS=DEL_pindel;EAS_AF=0.4097;END=68106026;EUR_AF=0.2833;NS=2504;SAS_AF=0.319;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
5	70368390	YL_CN_FIN_1166	C	<CN0>	100	PASS	AC=2290;AF=0.457268;AFR_AF=0.2179;AMR_AF=0.4409;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.6399;END=70391629;EUR_AF=0.4304;NS=2504;SAS_AF=0.6319;SVTYPE=DEL	GT	0|1
5	73648985	DEL_pindel_15800	TTTATTCTGTTTTTTTTTTTTTGTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3285;AF=0.65595;AFR_AF=0.6952;AMR_AF=0.5533;AN=5008;CS=DEL_pindel;EAS_AF=0.6458;END=73649303;EUR_AF=0.7038;MEINFO=AluYa,1,281,-;NS=2504;SAS_AF=0.637;SITEPOST=0.9879;SVTYPE=DEL_ALU	GT	1|1
5	75082293	DEL_pindel_15834	CAAAAATCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTCCTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=1634;AF=0.326278;AFR_AF=0.2625;AMR_AF=0.2349;AN=5008;CS=DEL_pindel;EAS_AF=0.4663;END=75082602;EUR_AF=0.335;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3241;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	1|0
5	75435663	DEL_pindel_15847	TTAGAAGCTCTTGAAAGTATTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCG	T	.	PASS	AC=1079;AF=0.215455;AFR_AF=0.1505;AMR_AF=0.2363;AN=5008;CS=DEL_pindel;EAS_AF=0.0238;END=75435781;EUR_AF=0.4185;MEINFO=AluYb8,206,282,-;NS=2504;SAS_AF=0.2771;SITEPOST=0.9992;SVTYPE=DEL_ALU	GT	1|0
5	77048345	DEL_pindel_15875	GTCCGGCTTATTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTCTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=1655;AF=0.330471;AFR_AF=0.3071;AMR_AF=0.4164;AN=5008;CS=DEL_pindel;EAS_AF=0.38;END=77048681;EUR_AF=0.3111;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2699;SITEPOST=0.9939;SVTYPE=DEL_ALU	GT	1|0
5	77062308	DEL_pindel_15876	TCTCTCACTTTTATTTATTTATTTATTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	T	.	PASS	AC=2425;AF=0.484225;AFR_AF=0.5257;AMR_AF=0.4971;AN=5008;CS=DEL_pindel;EAS_AF=0.4613;END=77062618;EUR_AF=0.4543;MEINFO=AluY,3,281,-;NS=2504;SAS_AF=0.4734;SITEPOST=0.9917;SVTYPE=DEL_ALU	GT	1|0
5	78276748	DEL_pindel_15895	TGAATTTCTAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3151;AF=0.629193;AFR_AF=0.6967;AMR_AF=0.6542;AN=5008;CS=DEL_pindel;EAS_AF=0.5833;END=78277072;EUR_AF=0.6233;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.5736;SITEPOST=0.9771;SVTYPE=DEL_ALU	GT	1|0
5	78277726	DEL_pindel_15896	TAGATATGACTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2338;AF=0.466853;AFR_AF=0.4637;AMR_AF=0.5865;AN=5008;CS=DEL_pindel;EAS_AF=0.3829;END=78278045;EUR_AF=0.5437;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3937;SITEPOST=0.9994;SVTYPE=DEL_ALU	GT	0|1
5	78426567	SVA_umary_SVA_248	C	<INS:ME:SVA>	.	.	AC=1476;AF=0.294728;AFR_AF=0.1604;AMR_AF=0.3559;AN=5008;CS=SVA_umary;EAS_AF=0.3621;EUR_AF=0.339;MEINFO=SVA,31,1627,+;NS=2504;SAS_AF=0.318;SITEPOST=1;SVLEN=1596;SVTYPE=SVA;TSD=AGGAATCATGGTGAAGCC	GT	1|0
5	80039371	DEL_pindel_15928	TAAAAAAACCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3532;AF=0.705272;AFR_AF=0.68;AMR_AF=0.7262;AN=5008;CS=DEL_pindel;EAS_AF=0.8323;END=80039680;EUR_AF=0.6541;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.6462;SITEPOST=0.99175;SVTYPE=DEL_ALU	GT	0|1
5	80751142	DEL_pindel_15942	TAAATCCTCCTTCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1849;AF=0.369209;AFR_AF=0.6566;AMR_AF=0.3314;AN=5008;CS=DEL_pindel;EAS_AF=0.1677;END=80751471;EUR_AF=0.2893;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2975;SITEPOST=0.9972;SVTYPE=DEL_ALU	GT	1|1
5	81008164	DEL_pindel_15946	TAAAAAATAAAGATTACAAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA	T	.	PASS	AC=3169;AF=0.632788;AFR_AF=0.6422;AMR_AF=0.6844;AN=5008;CS=DEL_pindel;EAS_AF=0.5665;END=81008437;EUR_AF=0.663;MEINFO=AluYb6_2,44,281,+;NS=2504;SAS_AF=0.6207;SITEPOST=0.982;SVTYPE=DEL_ALU	GT	0|1
5	81182479	DEL_pindel_15952	ACTGCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=3018;AF=0.602636;AFR_AF=0.708;AMR_AF=0.5951;AN=5008;CS=DEL_pindel;EAS_AF=0.501;END=81182821;EUR_AF=0.5249;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.6503;SITEPOST=0.982;SVTYPE=DEL_ALU	GT	1|1
5	82156716	DEL_pindel_15965	TAAAGAATTAGAGCTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCGGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1987;AF=0.396765;AFR_AF=0.4728;AMR_AF=0.3156;AN=5008;CS=DEL_pindel;EAS_AF=0.4891;END=82157031;EUR_AF=0.2714;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3855;SITEPOST=0.9986;SVTYPE=DEL_ALU	GT	0|1
5	82906058	DEL_pindel_15983	CCCTGACTGGAGGATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	C	.	PASS	AC=2818;AF=0.5627;AFR_AF=0.5741;AMR_AF=0.585;AN=5008;CS=DEL_pindel;EAS_AF=0.5149;END=82906377;EUR_AF=0.5616;MEINFO=AluYa5,3,281,-;NS=2504;SAS_AF=0.5818;SITEPOST=0.99685;SVTYPE=DEL_ALU	GT	1|1
5	83948134	YL_CN_FIN_1170	T	<CN0>	100	PASS	AC=4553;AF=0.909145;AFR_AF=0.68;AMR_AF=0.9712;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=1;END=83955051;EUR_AF=0.997;MC=YL_CN_CDX_1068,UW_VH_16524,UW_VH_3647,EM_DL_DEL78304,UW_VH_22045,SI_BD_5696;NS=2504;SAS_AF=0.9908;SVTYPE=DEL	GT	1|1
5	84814477	DEL_pindel_16003	AAATCTTTAAGAGAAAACTAGGTGCATATGAGTTTTTAATGATTCAACCTTTATTGACAATTATCTATGATGTATATT	A	.	PASS	AC=1429;AF=0.285343;AFR_AF=0.1619;AMR_AF=0.402;AN=5008;CS=DEL_pindel;EAS_AF=0.2054;END=84814554;EUR_AF=0.3658;NS=2504;SAS_AF=0.3691;SITEPOST=0.9994;SVTYPE=DEL	GT	0|1
5	85405341	DEL_pindel_16020	AAGGAGATCATTTTGGAGCTTTAAGATTTGACTGCCCCGTTGGATTGTGGACTTGCATGGAGCCTGCAGCCCCTTTATTTTGGCCAATTTCTCCCATTTGAAATGGCTGTATTTACCCAATGCCTGTACCCCCATTGTATCTAGGAAGTAACTTACGTGCTTTTGATTTT	A	.	PASS	AC=878;AF=0.175319;AFR_AF=0.1785;AMR_AF=0.1801;AN=5008;CS=DEL_pindel;EAS_AF=0.005;END=85405510;EUR_AF=0.2734;NS=2504;SAS_AF=0.2423;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
5	86246008	BI_GS_DEL1_B5_P0972_286	G	<CN0>	100	PASS	AC=437;AF=0.0872604;AFR_AF=0.1566;AMR_AF=0.0432;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.002;END=86247146;EUR_AF=0.0875;MC=UW_VH_2371,EM_DL_DEL10866690,SI_BD_5709;NS=2504;SAS_AF=0.1125;SVTYPE=DEL	GT	0|1
5	86372695	ALU_umary_ALU_4445	T	<INS:ME:ALU>	.	.	AC=2336;AF=0.466454;AFR_AF=0.2443;AMR_AF=0.5187;AN=5008;CS=ALU_umary;EAS_AF=0.5843;EUR_AF=0.5169;MEINFO=AluYa5,18,281,+;NS=2504;SAS_AF=0.5562;SITEPOST=1;SVLEN=263;SVTYPE=ALU;TSD=AAAGAAAATATTT	GT	1|0
5	87328660	DEL_pindel_16051	AACCTGACAGAAATCACCTTAAACAACTGTCCAAAGTTAATTTCACAGGTAATAAAACATATCTACATGCTGTACCTCCATATAATGCACTGAAAATGATACATTACTTTTGTGATGTTTTTCCTAATAATGTATGGCTTAAATATAG	A	.	PASS	AC=2394;AF=0.478035;AFR_AF=0.1309;AMR_AF=0.5764;AN=5008;CS=DEL_pindel;EAS_AF=0.7034;END=87328807;EUR_AF=0.6054;NS=2504;SAS_AF=0.5143;SITEPOST=0.9927;SVTYPE=DEL	GT	1|1
5	88032012	DEL_pindel_16060	TAAATATTTCAGCAACTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2618;AF=0.522764;AFR_AF=0.4297;AMR_AF=0.4914;AN=5008;CS=DEL_pindel;EAS_AF=0.6052;END=88032342;EUR_AF=0.5686;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5389;SITEPOST=0.9956;SVTYPE=DEL_ALU	GT	0|1
5	89450781	L1_umary_LINE1_1163	C	<INS:ME:LINE1>	.	.	AC=3899;AF=0.778554;AFR_AF=0.7262;AMR_AF=0.768;AN=5008;CS=L1_umary;EAS_AF=0.8274;EUR_AF=0.8091;MEINFO=LINE1,2,5975,+;NS=2504;SAS_AF=0.7751;SITEPOST=1;SVLEN=5973;SVTYPE=LINE1;TSD=GAAAGATGCTTAC	GT	0|1
5	90499767	SI_BD_5728	A	<CN0>	100	PASS	AC=3665;AF=0.731829;AFR_AF=0.534;AMR_AF=0.8069;AN=5008;CIEND=-54,304;CIPOS=-304,63;CS=DEL_union;EAS_AF=0.8006;END=90502128;EUR_AF=0.8797;MC=YL_CN_BEB_1073,YL_CN_PUR_1483,YL_CN_CLM_1049,EM_DL_DEL78428,YL_CN_FIN_1178,YL_CN_MXL_1047;NS=2504;SAS_AF=0.7229;SVTYPE=DEL	GT	1|1
5	95343311	DEL_pindel_16177	TAAGAAGAGGAAGATGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3813;AF=0.761382;AFR_AF=0.7859;AMR_AF=0.7349;AN=5008;CS=DEL_pindel;EAS_AF=0.7758;END=95343665;EUR_AF=0.7296;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7648;SITEPOST=0.9676;SVTYPE=DEL_ALU	GT	1|1
5	95909715	DEL_pindel_16191	ACATTTGCCCACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	A	.	PASS	AC=3212;AF=0.641374;AFR_AF=0.6437;AMR_AF=0.6297;AN=5008;CS=DEL_pindel;EAS_AF=0.6944;END=95910061;EUR_AF=0.5845;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6503;SITEPOST=0.9749;SVTYPE=DEL_ALU	GT	1|0
5	96325017	DEL_pindel_16206	TTATATATAATATATAATTATATATAATATATAATATATTATATATTATATATAATTATATATTATATATTATATACAATATATTATATATTATATATAA	T	.	PASS	AC=2689;AF=0.536941;AFR_AF=0.469;AMR_AF=0.5951;AN=5008;CS=DEL_pindel;EAS_AF=0.5883;END=96325116;EUR_AF=0.5278;NS=2504;SAS_AF=0.544;SITEPOST=0.8637;SVTYPE=DEL	GT	1|1
5	96866423	L1_umary_LINE1_1173	G	<INS:ME:LINE1>	.	.	AC=1454;AF=0.290335;AFR_AF=0.4304;AMR_AF=0.1974;AN=5008;CS=L1_umary;EAS_AF=0.1478;EUR_AF=0.2316;MEINFO=LINE1,5248,5988,+;NS=2504;SAS_AF=0.3742;SITEPOST=1;SVLEN=740;SVTYPE=LINE1;TSD=AAAAAATACATTTTTAG	GT	0|1
5	97035240	BI_GS_DEL1_B5_P0983_46	T	<CN0>	100	PASS	AC=64;AF=0.0127795;AFR_AF=0.003;AMR_AF=0.0144;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=97035573;EUR_AF=0.0358;NS=2504;SAS_AF=0.0143;SVTYPE=DEL	GT	0|1
5	98345117	BI_GS_DEL1_B1_P0984_298	C	<CN0>	100	PASS	AC=3792;AF=0.757188;AFR_AF=0.6793;AMR_AF=0.7579;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9325;END=98347479;EUR_AF=0.673;MC=YL_CN_GWD_1739,SI_BD_5762,EM_DL_DEL78554,YL_CN_STU_1232;NS=2504;SAS_AF=0.7679;SVTYPE=DEL	GT	0|1
5	98839884	BI_GS_DEL1_B5_P0984_857	G	<CN0>	100	PASS	AC=1777;AF=0.354832;AFR_AF=0.3858;AMR_AF=0.3415;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.2996;END=98842906;EUR_AF=0.3628;MC=SI_BD_5768,YL_CN_MXL_1053,EM_DL_DEL78567,YL_CN_GWD_1741,UW_VH_1442;NS=2504;SAS_AF=0.3712;SVTYPE=DEL	GT	1|0
5	99174314	DEL_pindel_16260	TTCTTTATCATTTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3131;AF=0.6252;AFR_AF=0.7421;AMR_AF=0.5893;AN=5008;CS=DEL_pindel;EAS_AF=0.5665;END=99174628;EUR_AF=0.5934;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.5859;SITEPOST=0.9686;SVTYPE=DEL_ALU	GT	0|1
5	99759460	DEL_pindel_16274	TAAAAACACAGATAAACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGCCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3714;AF=0.741613;AFR_AF=0.6959;AMR_AF=0.7421;AN=5008;CS=DEL_pindel;EAS_AF=0.7768;END=99759778;EUR_AF=0.7396;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.7689;SITEPOST=0.9675;SVTYPE=DEL_ALU	GT	1|0
5	99923533	DEL_pindel_16284	TAAAATGTTATTAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATGGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	T	.	PASS	AC=1972;AF=0.39377;AFR_AF=0.6581;AMR_AF=0.4611;AN=5008;CS=DEL_pindel;EAS_AF=0.0952;END=99923838;EUR_AF=0.4354;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.2536;SITEPOST=0.9902;SVTYPE=DEL_ALU	GT	0|1
5	100497396	ALU_umary_ALU_4517	T	<INS:ME:ALU>	.	.	AC=2154;AF=0.430112;AFR_AF=0.407;AMR_AF=0.3588;AN=5008;CS=ALU_umary;EAS_AF=0.5308;EUR_AF=0.4443;MEINFO=AluUndef,1,266,-;NS=2504;SAS_AF=0.3937;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=null	GT	1|0
5	101693791	BI_GS_DEL1_B2_P0987_434	T	<CN0>	100	PASS	AC=2908;AF=0.580671;AFR_AF=0.6634;AMR_AF=0.5317;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4643;END=101694719;EUR_AF=0.6392;MC=SI_BD_5792;NS=2504;SAS_AF=0.5634;SVTYPE=DEL	GT	1|1
5	102163354	DEL_pindel_16331	TTGAAGCTCACTATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGG	T	.	PASS	AC=3078;AF=0.614617;AFR_AF=0.6657;AMR_AF=0.6052;AN=5008;CS=DEL_pindel;EAS_AF=0.6111;END=102163607;EUR_AF=0.5278;MEINFO=AluYb,83,281,-;NS=2504;SAS_AF=0.6452;SITEPOST=0.971;SVTYPE=DEL_ALU	GT	1|0
5	103738436	ALU_umary_ALU_4538	T	<INS:ME:ALU>	.	.	AC=693;AF=0.138379;AFR_AF=0.0076;AMR_AF=0.1873;AN=5008;CS=ALU_umary;EAS_AF=0.2421;EUR_AF=0.2127;MEINFO=AluUndef,28,276,-;NS=2504;SAS_AF=0.0971;SITEPOST=1;SVLEN=248;SVTYPE=ALU;TSD=AAAGTTAAAGTTAATTTT	GT	0|1
5	104877052	DEL_pindel_16385	AGCTGAGATCATGCCACTGCATTCTATCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAATAAAAAAAATATATATGTATATAT	A	.	PASS	AC=2111;AF=0.421526;AFR_AF=0.5787;AMR_AF=0.2853;AN=5008;CS=DEL_pindel;EAS_AF=0.2391;END=104877141;EUR_AF=0.3608;NS=2504;SAS_AF=0.5562;SITEPOST=0.9996;SVTYPE=DEL	GT	1|0
5	106324752	BI_GS_DEL1_B1_P0992_238	C	<CN0>	100	PASS	AC=2259;AF=0.451078;AFR_AF=0.3048;AMR_AF=0.4928;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6091;END=106326434;EUR_AF=0.4463;MC=YL_CN_KHV_1294,UW_VH_503,SI_BD_5816,YL_CN_PUR_1502,EM_DL_DEL10874391,YL_CN_BEB_1087,YL_CN_PJL_1289,UW_VH_2661,UW_VH_20559,YL_CN_MSL_1186,YL_CN_CLM_1071,YL_CN_ESN_1327,YL_CN_YRI_1630,YL_CN_CEU_1583;NS=2504;SAS_AF=0.4611;SVTYPE=DEL	GT	1|0
5	110694944	BI_GS_DEL1_B2_P0996_490	A	<CN0>	100	PASS	AC=4520;AF=0.902556;AFR_AF=0.7617;AMR_AF=0.9308;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=1;END=110695264;EUR_AF=0.8917;MC=DEL_pindel_16504;NS=2504;SAS_AF=0.9836;SVTYPE=DEL	GT	1|1
5	112477737	BI_GS_DEL1_B5_P0998_612	A	<CN0>	100	PASS	AC=36;AF=0.0071885;AFR_AF=0.0023;AMR_AF=0.0058;AN=5008;CIEND=-20,21;CIPOS=-20,21;CS=DEL_union;EAS_AF=0.001;END=112478297;EUR_AF=0.0209;MC=UW_VH_3539,BI_GS_DEL1_B1_P0998_440;NS=2504;SAS_AF=0.0072;SVTYPE=DEL	GT	1|0
5	113459037	DEL_pindel_16551	ACATTTTCTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGTCTCAGCCTCCCGCGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTGTTTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	A	.	PASS	AC=1201;AF=0.239816;AFR_AF=0.4138;AMR_AF=0.2363;AN=5008;CS=DEL_pindel;EAS_AF=0.0198;END=113459360;EUR_AF=0.2873;MEINFO=AluYf1,1,281,-;NS=2504;SAS_AF=0.1851;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	0|1
5	114731312	DEL_pindel_16580	GCTCTACAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGCGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=3347;AF=0.668331;AFR_AF=0.6452;AMR_AF=0.6859;AN=5008;CS=DEL_pindel;EAS_AF=0.6607;END=114731630;EUR_AF=0.6819;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.681;SITEPOST=0.97515;SVTYPE=DEL_ALU	GT	0|1
5	114969401	BI_GS_DEL1_B3_P1000_41	A	<CN0>	100	PASS	AC=1602;AF=0.319888;AFR_AF=0.2368;AMR_AF=0.3098;AN=5008;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.3591;END=114969875;EUR_AF=0.3787;NS=2504;SAS_AF=0.3384;SVTYPE=DEL	GT	0|1
5	115130457	DEL_pindel_16594	CAGATTAAGTGTAAGAAACCACTAGGGGATTGTCTAAAAATGCAGTTTCCTGGACTCACCTCCAGAGAGTCCAAGTCTGTGGGTCTAGGATGATCCCTCTAAGTTATTTCTCTCTGTTCAAGAACAATGTGTTATCACCCTAGCAGGAAACCCCTTGGGCTGGGCAGCCACAATCAGCAAATAAGGGAGAGAGACATCCTCCTAGATTGGGCAGTGGTGGTTATGTGCAGGCACAGTAGTCACCTGTTAACAGGAAAGGGTGAGGCACCTGCTTCTTGGTGGGAGCAGACAAAGTTCCTCCTTTGGCCAGAGGTTGAGGTACTGAAAGGATTCATGACTCCCATTAATTA	C	.	PASS	AC=3459;AF=0.690695;AFR_AF=0.7874;AMR_AF=0.7579;AN=5008;CS=DEL_pindel;EAS_AF=0.4871;END=115130806;EUR_AF=0.7068;NS=2504;SAS_AF=0.7055;SITEPOST=0.9878;SVTYPE=DEL	GT	1|1
5	115894136	DEL_pindel_16615	TAAGGATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3141;AF=0.627196;AFR_AF=0.5424;AMR_AF=0.6657;AN=5008;CS=DEL_pindel;EAS_AF=0.7361;END=115894457;EUR_AF=0.665;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5634;SITEPOST=0.9914;SVTYPE=DEL_ALU	GT	1|1
5	116428182	DEL_pindel_16642	ACATACTCCAATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTGAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2718;AF=0.542732;AFR_AF=0.4781;AMR_AF=0.5836;AN=5008;CS=DEL_pindel;EAS_AF=0.6399;END=116428500;EUR_AF=0.5288;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5153;SITEPOST=0.9946;SVTYPE=DEL_ALU	GT	0|1
5	119015144	DEL_pindel_16697	TGAGAAGTCTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3372;AF=0.673323;AFR_AF=0.7648;AMR_AF=0.598;AN=5008;CS=DEL_pindel;EAS_AF=0.6786;END=119015464;EUR_AF=0.6561;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6155;SITEPOST=0.9846;SVTYPE=DEL_ALU	GT	1|0
5	119380174	UW_VH_15926	A	<CN0>	100	PASS	AC=3383;AF=0.675519;AFR_AF=0.7005;AMR_AF=0.6037;AN=5008;CIEND=0,415;CIPOS=-594,0;CS=DEL_union;EAS_AF=0.7817;END=119382671;EUR_AF=0.498;MC=SI_BD_5880,YL_CN_KHV_1308,YL_CN_FIN_1211,EM_DL_DEL79292,UW_VH_510;NS=2504;SAS_AF=0.7658;SVTYPE=DEL	GT	0|1
5	121059232	BI_GS_DEL1_B1_P1007_48	T	<CN0>	100	PASS	AC=4450;AF=0.888578;AFR_AF=0.9024;AMR_AF=0.9063;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8244;END=121060007;EUR_AF=0.9583;MC=EM_DL_DEL10880622,SI_BD_5896,DEL_pindel_16730;NS=2504;SAS_AF=0.8517;SVTYPE=DEL	GT	1|1
5	122274354	DEL_pindel_16755	GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCAATGAAA	G	.	PASS	AC=4240;AF=0.846645;AFR_AF=0.9092;AMR_AF=0.8127;AN=5008;CS=DEL_pindel;EAS_AF=0.9861;END=122274677;EUR_AF=0.6759;MEINFO=AluYa2,1,281,+;NS=2504;SAS_AF=0.818;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|1
5	122723707	DEL_pindel_16756	CTTTTTGACCAGTAATACTTTGACTAGTATTATTATTACTTTTTTTTGACCATTATT	C	.	PASS	AC=2154;AF=0.430112;AFR_AF=0.4289;AMR_AF=0.3905;AN=5008;CS=DEL_pindel;EAS_AF=0.4692;END=122723763;EUR_AF=0.4304;NS=2504;SAS_AF=0.4192;SITEPOST=0.9984;SVTYPE=DEL	GT	0|1
5	122976151	ALU_umary_ALU_4639	A	<INS:ME:ALU>	.	.	AC=403;AF=0.0804712;AFR_AF=0.0605;AMR_AF=0.1124;AN=5008;CS=ALU_umary;EAS_AF=0.0675;EUR_AF=0.0746;MEINFO=AluYb8,1,267,+;NS=2504;SAS_AF=0.1043;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=AAAAAAACAAGGAA	GT	1|0
5	123963235	DEL_pindel_16782	GTGTGTGTATATATACATATATGTATATATGTGTGTATATATACATATATGTATATA	G	.	PASS	AC=1462;AF=0.291933;AFR_AF=0.2095;AMR_AF=0.3055;AN=5008;CS=DEL_pindel;EAS_AF=0.375;END=123963291;EUR_AF=0.3121;NS=2504;SAS_AF=0.2873;SITEPOST=0.9827;SVTYPE=DEL	GT	0|1
5	124363835	DEL_pindel_16795	TAAAAAAATCCAGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1440;AF=0.28754;AFR_AF=0.6513;AMR_AF=0.1816;AN=5008;CS=DEL_pindel;EAS_AF=0.0308;END=124364161;EUR_AF=0.2346;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.1902;SITEPOST=0.99075;SVTYPE=DEL_ALU	GT	0|1
5	124484339	DEL_pindel_16797	GACAAGAAGAGTTTCCATTGATCATTGTACCTTGGATATCTTCTCCATTCTTT	G	.	PASS	AC=2367;AF=0.472644;AFR_AF=0.4697;AMR_AF=0.4798;AN=5008;CS=DEL_pindel;EAS_AF=0.4702;END=124484391;EUR_AF=0.4612;NS=2504;SAS_AF=0.4857;SITEPOST=0.9997;SVTYPE=DEL	GT	1|0
5	126458368	BI_GS_DEL1_B4_P1012_86	G	<CN0>	100	PASS	AC=2644;AF=0.527955;AFR_AF=0.4198;AMR_AF=0.5836;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6458;END=126458811;EUR_AF=0.4612;MC=DEL_pindel_16829;NS=2504;SAS_AF=0.5818;SVTYPE=DEL	GT	1|1
5	127172319	SI_BD_5930	G	<CN0>	100	PASS	AC=2976;AF=0.594249;AFR_AF=0.5741;AMR_AF=0.6369;AN=5008;CIEND=-66,282;CIPOS=-282,59;CS=DEL_union;EAS_AF=0.5784;END=127173286;EUR_AF=0.6869;MC=UW_VH_11070,EM_DL_DEL10883636,YL_CN_CEU_1612;NS=2504;SAS_AF=0.5123;SVTYPE=DEL	GT	1|0
5	127172367	BI_GS_DEL1_B5_P1013_223	G	<CN0>	100	PASS	AC=2963;AF=0.591653;AFR_AF=0.5719;AMR_AF=0.6326;AN=5008;CIEND=-28,28;CIPOS=-28,28;CS=DEL_union;EAS_AF=0.5744;END=127172679;EUR_AF=0.6849;NS=2504;SAS_AF=0.5112;SVTYPE=DEL	GT	1|0
5	127407440	BI_GS_DEL1_B4_P1013_89	C	<CN0>	100	PASS	AC=1871;AF=0.373602;AFR_AF=0.6256;AMR_AF=0.3963;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3581;END=127410918;EUR_AF=0.2078;MC=UW_VH_17605,UW_VH_6943,YL_CN_STU_1267,UW_VH_1764,EM_DL_DEL79507,UW_VH_19289,UW_VH_10610,UW_VH_13833,SI_BD_5934,UW_VH_5586,UW_VH_23140,UW_VH_12000,YL_CN_GIH_996,UW_VH_15802,UW_VH_14494;NS=2504;SAS_AF=0.2035;SVTYPE=DEL	GT	0|1
5	128314869	ALU_umary_ALU_4668	G	<INS:ME:ALU>	.	.	AC=752;AF=0.15016;AFR_AF=0.1384;AMR_AF=0.1643;AN=5008;CS=ALU_umary;EAS_AF=0.0238;EUR_AF=0.2704;MEINFO=AluUndef,1,265,+;NS=2504;SAS_AF=0.1626;SITEPOST=1;SVLEN=264;SVTYPE=ALU;TSD=AAGAAGTCACTTTTG	GT	1|1
5	130853258	ALU_umary_ALU_4684	G	<INS:ME:ALU>	.	.	AC=2116;AF=0.422524;AFR_AF=0.2738;AMR_AF=0.438;AN=5008;CS=ALU_umary;EAS_AF=0.371;EUR_AF=0.5547;MEINFO=AluYb8,11,278,-;NS=2504;SAS_AF=0.5297;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=AAAAAATCTCTCAAATG	GT	1|1
5	132934098	L1_umary_LINE1_1212	C	<INS:ME:LINE1>	.	.	AC=410;AF=0.081869;AFR_AF=0.152;AMR_AF=0.0533;AN=5008;CS=L1_umary;EAS_AF=0.0605;EUR_AF=0.0656;MEINFO=LINE1,2411,6009,+;NS=2504;SAS_AF=0.046;SITEPOST=1;SVLEN=3598;SVTYPE=LINE1;TSD=AAGAGGTGCTGGC	GT	0|1
5	135115148	BI_GS_DEL1_B2_P1021_98	T	<CN0>	100	PASS	AC=1656;AF=0.330671;AFR_AF=0.1127;AMR_AF=0.4063;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.2371;END=135120700;EUR_AF=0.5417;MC=EM_DL_DEL79690,YL_CN_ASW_1352;NS=2504;SAS_AF=0.4509;SVTYPE=DEL	GT	1|1
5	136851113	DUP_uwash_chr5_136851112_136857394	G	<CN0>	.	PASS	AC=4957;AF=0.989816;AFR_AF=0.9629;AMR_AF=0.9971;AN=5008;CS=DUP_uwash;EAS_AF=1;END=136857394;EUR_AF=1;NS=2504;SAS_AF=1;SITEPOST=1;SVTYPE=DEL	GT	1|1
5	136854589	YL_CN_CDX_1103	T	<CN0>	100	PASS	AC=4934;AF=0.985224;AFR_AF=0.9448;AMR_AF=0.9986;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=1;END=136856557;EUR_AF=1;MC=YL_CN_PEL_1134,YL_CN_IBS_1143,YL_CN_ASW_1354,YL_CN_LWK_1259,YL_CN_CHB_1300,YL_CN_ACB_1490,YL_CN_KHV_1319,BI_GS_DEL1_B2_P1022_726,YL_CN_FIN_1225,YL_CN_ITU_1272,UW_VH_513,YL_CN_JPT_1418,YL_CN_ESN_1361,YL_CN_STU_1272,YL_CN_GWD_1799,SI_BD_5987,UW_VH_16971,YL_CN_BEB_1112;NS=2504;SAS_AF=1;SVTYPE=DEL	GT	1|1
5	140554408	DUP_gs_CNV_5_140554408_140558942	C	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>,<CN6>,<CN7>	.	PASS	AC=38,484,870,34,9,4,10;AF=0.00758786,0.0966454,0.173722,0.00678914,0.00179712,0.00079872,0.00199681;AFR_AF=0,0.121,0.0212,0,0,0.0008,0;AMR_AF=0.0058,0.0735,0.2709,0.0058,0.0014,0,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.004,0.12,0.1062,0.005,0.002,0.001,0.001;END=140558942;EUR_AF=0.0149,0.0944,0.3072,0.0149,0.005,0.002,0.007;NS=2504;SAS_AF=0.0153,0.0583,0.2434,0.0102,0.001,0,0.001;SITEPOST=0.9973;SVTYPE=CNV	GT	0|4
5	142935366	DEL_pindel_17132	TAAAAATAAAAGTATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCGGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATA	T	.	PASS	AC=2785;AF=0.55611;AFR_AF=0.702;AMR_AF=0.5447;AN=5008;CS=DEL_pindel;EAS_AF=0.4256;END=142935678;EUR_AF=0.5905;MEINFO=AluYa4b,1,281,+;NS=2504;SAS_AF=0.4663;SITEPOST=0.9939;SVTYPE=DEL_ALU	GT	1|1
5	144059460	CINV_delly_INV00084076	C	<INV>	.	PASS	AC=1040;AF=0.207668;AFR_AF=0.1339;AMR_AF=0.1499;AN=5008;CIEND=-183,183;CIPOS=-183,183;CS=CINV_delly;EAS_AF=0.4256;END=144059732;EUR_AF=0.0825;IMPRECISE;NS=2504;SAS_AF=0.2526;SVTYPE=INV	GT	1|0
5	146369626	ALU_umary_ALU_4737	A	<INS:ME:ALU>	.	.	AC=1351;AF=0.269768;AFR_AF=0.0651;AMR_AF=0.3703;AN=5008;CS=ALU_umary;EAS_AF=0.1944;EUR_AF=0.4493;MEINFO=AluUndef,1,260,+;NS=2504;SAS_AF=0.3681;SITEPOST=1;SVLEN=259;SVTYPE=ALU;TSD=AAAACCATAAAACA	GT	1|0
5	146380181	DEL_pindel_17196	ATGATCAGTAACTATTAGGTTGGTGCAAAAGTAATTGTGGATTTGCCATTTTTAATGGCAAAAACCACAATTACTT	A	.	PASS	AC=1369;AF=0.273363;AFR_AF=0.4054;AMR_AF=0.1412;AN=5008;CS=DEL_pindel;EAS_AF=0.2857;END=146380256;EUR_AF=0.1779;NS=2504;SAS_AF=0.274;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
5	146622654	BI_GS_DEL1_B5_P1032_815	A	<CN0>	100	PASS	AC=1849;AF=0.369209;AFR_AF=0.4054;AMR_AF=0.4899;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2609;END=146623087;EUR_AF=0.4145;MC=UW_VH_518;NS=2504;SAS_AF=0.2996;SVTYPE=DEL	GT	1|1
5	147462155	DEL_pindel_17219	TTATATATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3535;AF=0.705871;AFR_AF=0.7284;AMR_AF=0.6873;AN=5008;CS=DEL_pindel;EAS_AF=0.7956;END=147462471;EUR_AF=0.5427;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.7638;SITEPOST=0.96125;SVTYPE=DEL_ALU	GT	0|1
5	147552866	CINV_delly_INV00084159	T	<INV>	.	PASS	AC=2246;AF=0.448482;AFR_AF=0.4902;AMR_AF=0.3804;AN=5008;CIEND=-274,274;CIPOS=-274,274;CS=CINV_delly;EAS_AF=0.3819;END=147554617;EUR_AF=0.5338;IMPRECISE;NS=2504;SAS_AF=0.4213;SVTYPE=INV	GT	1|1
5	148385841	DEL_pindel_17244	AAAAAAAGAAGTTCTAGATTCAGCAAGCAAGAGAAGCAGGGATAAAACCTTCTTAAGATCTAAGTATACTTAGTTTAAAGGCCCCATACCTCGTTATCTC	A	.	PASS	AC=835;AF=0.166733;AFR_AF=0.115;AMR_AF=0.1614;AN=5008;CS=DEL_pindel;EAS_AF=0.1915;END=148385940;EUR_AF=0.162;NS=2504;SAS_AF=0.2198;SITEPOST=1;SVTYPE=DEL	GT	0|1
5	148401433	DEL_pindel_17245	TTCACAAACTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCC	T	.	PASS	AC=2211;AF=0.441494;AFR_AF=0.5855;AMR_AF=0.4323;AN=5008;CS=DEL_pindel;EAS_AF=0.3175;END=148401591;EUR_AF=0.3738;NS=2504;SAS_AF=0.4509;SITEPOST=0.996;SVTYPE=DEL	GT	1|1
5	150210002	DEL_pindel_17286	CCTATAGAGTCATTTCAGATCTAAAGATACACATAGGCTGAGAGTGAAAGAATGGAAAAACATATTTCATACAAATAATAATGAAAAGAGATCAAGGCAGAAATTTCCCCAATAATAGTTGGATAATT	C	.	PASS	AC=278;AF=0.0555112;AFR_AF=0.0076;AMR_AF=0.0389;AN=5008;CS=DEL_pindel;EAS_AF=0.1458;END=150210129;EUR_AF=0.0388;NS=2504;SAS_AF=0.0562;SITEPOST=0.9992;SVTYPE=DEL	GT	1|0
5	150789783	UW_VH_20188	C	<CN0>	100	PASS	AC=1171;AF=0.233826;AFR_AF=0.1309;AMR_AF=0.1066;AN=5008;CIEND=0,368;CIPOS=-414,0;CS=DEL_union;EAS_AF=0.3879;END=150792627;EUR_AF=0.174;MC=YL_CN_GWD_1817,UW_VH_4942,EM_DL_DEL80219,UW_VH_18450,YL_CN_ASW_1371,UW_VH_11116,UW_VH_14444,UW_VH_2720,UW_VH_21684,YL_CN_CHB_1318,UW_VH_2776,SI_BD_6068,UW_VH_25253,UW_VH_14317,YL_CN_KHV_1331,UW_VH_11294,BI_GS_CNV_5_150789594_150792683,UW_VH_6944;NS=2504;SAS_AF=0.3661;SVTYPE=DEL	GT	0|1
5	151760910	DEL_pindel_17321	ACTTAAATGTATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=483;AF=0.0964457;AFR_AF=0.0106;AMR_AF=0.2233;AN=5008;CS=DEL_pindel;EAS_AF=0.0198;END=151761223;EUR_AF=0.159;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.137;SITEPOST=0.9992;SVTYPE=DEL_ALU	GT	1|0
5	152529738	ALU_umary_ALU_4773	T	<INS:ME:ALU>	.	.	AC=940;AF=0.1877;AFR_AF=0.1384;AMR_AF=0.1671;AN=5008;CS=ALU_umary;EAS_AF=0.0883;EUR_AF=0.3231;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2321;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TCAACACAGTATTTTT	GT	1|1
5	154315917	DEL_pindel_17386	CAGTGAGCCAAGATCCCGCCATTGCACTCCAGCCTGGGCGACAGAGCCAGACTCCGTCTCAAAAAAAAAAAAAAAAGTAATTAATA	C	.	PASS	AC=4751;AF=0.948682;AFR_AF=0.8684;AMR_AF=0.9755;AN=5008;CS=DEL_pindel;EAS_AF=0.9782;END=154316002;EUR_AF=0.9751;NS=2504;SAS_AF=0.9806;SITEPOST=1;SVTYPE=DEL	GT	1|1
5	155290624	ALU_umary_ALU_4788	C	<INS:ME:ALU>	.	.	AC=941;AF=0.187899;AFR_AF=0.0159;AMR_AF=0.121;AN=5008;CS=ALU_umary;EAS_AF=0.3472;EUR_AF=0.2783;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.2106;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AACAAAGAAAATTC	GT	0|1
5	155311785	BI_GS_DEL1_B4_P1041_70	A	<CN0>	100	PASS	AC=2175;AF=0.434305;AFR_AF=0.6762;AMR_AF=0.5461;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2718;END=155312580;EUR_AF=0.3101;MC=EM_DL_DEL10894470,UW_VH_22900,UW_VH_21180,SI_BD_6092,DEL_pindel_17408,UW_VH_520;NS=2504;SAS_AF=0.3231;SVTYPE=DEL	GT	1|0
5	158592397	DEL_pindel_17476	AAATAATATCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT	A	.	PASS	AC=3270;AF=0.652955;AFR_AF=0.7595;AMR_AF=0.6628;AN=5008;CS=DEL_pindel;EAS_AF=0.5288;END=158592742;EUR_AF=0.6064;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6779;SITEPOST=0.9887;SVTYPE=DEL_ALU	GT	1|1
5	159742556	DEL_pindel_17500	AAGGGGATGAATAAAAACAAAAAAAGATTAGAGTACGATCCCAGTTAAACTACATTCATGCACACACACATATGCAAAAATATTAACTGTGTAATCAGAGTGGTAGG	A	.	PASS	AC=1612;AF=0.321885;AFR_AF=0.0877;AMR_AF=0.3977;AN=5008;CS=DEL_pindel;EAS_AF=0.372;END=159742662;EUR_AF=0.4811;NS=2504;SAS_AF=0.3691;SITEPOST=0.9996;SVTYPE=DEL	GT	0|1
5	160431305	DEL_pindel_17523	TAGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2956;AF=0.590256;AFR_AF=0.646;AMR_AF=0.4856;AN=5008;CS=DEL_pindel;EAS_AF=0.5724;END=160431636;EUR_AF=0.5875;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6104;SITEPOST=0.9919;SVTYPE=DEL_ALU	GT	1|1
5	164366297	DEL_pindel_17607	TCTCTAAGGTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=2862;AF=0.571486;AFR_AF=0.5862;AMR_AF=0.5937;AN=5008;CS=DEL_pindel;EAS_AF=0.6369;END=164366607;EUR_AF=0.506;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.5358;SITEPOST=0.99485;SVTYPE=DEL_ALU	GT	1|1
5	166294129	DEL_pindel_17636	ATTTTTTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATT	A	.	PASS	AC=4372;AF=0.873003;AFR_AF=0.8676;AMR_AF=0.8977;AN=5008;CS=DEL_pindel;EAS_AF=0.8581;END=166294321;EUR_AF=0.8738;NS=2504;SAS_AF=0.8773;SITEPOST=0.9999;SVTYPE=DEL	GT	1|1
5	167299359	DEL_pindel_17667	GGAAAGAGAAGGAAGGAAGGAAGGAAAAGAAAGAAGGAAAGAAAGGAAGAAAAAAAGAGAAAGAGAGAGACAGAAAGAAAGCAAACAAGCACGAAAGAAAGAAAGCACGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	G	.	PASS	AC=1395;AF=0.278554;AFR_AF=0.0734;AMR_AF=0.3156;AN=5008;CS=DEL_pindel;EAS_AF=0.3026;END=167299582;EUR_AF=0.3847;NS=2504;SAS_AF=0.3957;SITEPOST=0.9992;SVTYPE=DEL	GT	1|0
5	168394430	DEL_pindel_17695	GCCATCTCAAATCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATCTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=133;AF=0.0265575;AFR_AF=0.0076;AMR_AF=0.0216;AN=5008;CS=DEL_pindel;EAS_AF=0.0258;END=168394743;EUR_AF=0.0547;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.0276;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|0
5	168742523	DEL_pindel_17710	TAAAAATGTTCCCTGACTCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3318;AF=0.66254;AFR_AF=0.674;AMR_AF=0.6787;AN=5008;CS=DEL_pindel;EAS_AF=0.7113;END=168742757;EUR_AF=0.6074;MEINFO=AluY,86,281,+;NS=2504;SAS_AF=0.6421;SITEPOST=0.9659;SVTYPE=DEL_ALU	GT	0|1
5	168911933	ALU_umary_ALU_4861	G	<INS:ME:ALU>	.	.	AC=1218;AF=0.243211;AFR_AF=0.1392;AMR_AF=0.1859;AN=5008;CS=ALU_umary;EAS_AF=0.3948;EUR_AF=0.2694;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.2413;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAGAG	GT	1|0
5	169597462	CINV_delly_INV00084708	G	<INV>	.	PASS	AC=2182;AF=0.435703;AFR_AF=0.1165;AMR_AF=0.5476;AN=5008;CIEND=-15,15;CIPOS=-15,15;CS=CINV_delly;EAS_AF=0.6994;END=169598751;EUR_AF=0.4732;IMPRECISE;NS=2504;SAS_AF=0.4775;SVTYPE=INV	GT	0|1
5	170158817	DEL_pindel_17725	TGAAAAGCTGAGATCCCGCCACTGCACTCCAGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3364;AF=0.671725;AFR_AF=0.6581;AMR_AF=0.7161;AN=5008;CS=DEL_pindel;EAS_AF=0.7411;END=170158906;EUR_AF=0.6412;MEINFO=AluYa8,226,282,+;NS=2504;SAS_AF=0.6186;SITEPOST=0.98925;SVTYPE=DEL_ALU	GT	1|1
5	171893746	ALU_umary_ALU_4873	T	<INS:ME:ALU>	.	.	AC=1070;AF=0.213658;AFR_AF=0.0673;AMR_AF=0.3199;AN=5008;CS=ALU_umary;EAS_AF=0.2331;EUR_AF=0.338;MEINFO=AluYc1,1,275,-;NS=2504;SAS_AF=0.1881;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=TCCCCAGATTTCT	GT	1|1
5	172973014	BI_GS_DEL1_B1_P1058_883	G	<CN0>	100	PASS	AC=891;AF=0.177915;AFR_AF=0.1619;AMR_AF=0.2017;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1349;END=172974746;EUR_AF=0.2107;MC=YL_CN_TSI_1236,YL_CN_BEB_1140,YL_CN_CLM_1121,UW_VH_1454,YL_CN_JPT_1446,EM_DL_DEL10901725,UW_VH_24831;NS=2504;SAS_AF=0.1933;SVTYPE=DEL	GT	0|1
5	175353978	DUP_gs_CNV_5_175353978_175371353	C	<CN2>	.	PASS	AC=4980;AF=0.994409;AFR_AF=0.9826;AMR_AF=0.9971;AN=5008;CS=DUP_gs;EAS_AF=0.998;END=175371353;EUR_AF=0.999;NS=2504;SAS_AF=1;SITEPOST=1;SVTYPE=DUP	GT	1|1
5	177199170	UW_VH_14200	T	<CN0>	100	PASS	AC=2820;AF=0.563099;AFR_AF=0.5567;AMR_AF=0.5403;AN=5008;CIEND=0,128;CIPOS=-59,0;CS=DEL_union;EAS_AF=0.5625;END=177205310;EUR_AF=0.5398;NS=2504;SAS_AF=0.6125;SVTYPE=DEL	GT	1|0
5	177405751	EM_DL_DEL10903754	T	<CN0>	100	PASS	AC=3558;AF=0.710463;AFR_AF=0.5446;AMR_AF=0.8487;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.6538;END=177406551;EUR_AF=0.833;NS=2504;SAS_AF=0.7689;SVTYPE=DEL	GT	1|1
5	180375655	DUP_gs_CNV_5_180375655_180420806	A	<CN0>,<CN2>	.	PASS	AC=1069,11;AF=0.213458,0.00219649;AFR_AF=0.1044,0.0008;AMR_AF=0.353,0;AN=5008;CS=DUP_gs;EAS_AF=0.251,0.005;END=180420806;EUR_AF=0.3221,0.005;MC=UW_VH_5215,SI_BD_6266,UW_VH_11402,YL_CN_CDX_1148,UW_VH_2555;NS=2504;SAS_AF=0.1115,0;SITEPOST=1;SVTYPE=CNV	GT	1|0
6	256502	DUP_gs_CNV_6_256502_293373	G	<CN2>,<CN3>	.	PASS	AC=3317,33;AF=0.66234,0.00658946;AFR_AF=0.8661,0.0098;AMR_AF=0.4078,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.5685,0.0089;END=293373;EUR_AF=0.5358,0.003;NS=2504;SAS_AF=0.7945,0.0051;SITEPOST=0.9999;SVTYPE=CNV	GT	1|0
6	305181	DUP_gs_CNV_6_305181_340601	A	<CN2>,<CN3>,<CN4>	.	PASS	AC=4153,76,9;AF=0.829273,0.0151757,0.00179712;AFR_AF=0.8949,0.0113,0;AMR_AF=0.7839,0.0173,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.7639,0.0159,0.002;END=340601;EUR_AF=0.7922,0.0219,0.004;NS=2504;SAS_AF=0.8783,0.0112,0;SITEPOST=0.9998;SVTYPE=CNV	GT	1|1
6	327586	DUP_gs_CNV_6_327586_368712	A	<CN2>,<CN3>,<CN4>	.	PASS	AC=4155,75,9;AF=0.829673,0.014976,0.00179712;AFR_AF=0.8941,0.0113,0;AMR_AF=0.7824,0.0173,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.7629,0.0149,0.002;END=368712;EUR_AF=0.7972,0.0219,0.004;NS=2504;SAS_AF=0.8783,0.0112,0;SITEPOST=0.9997;SVTYPE=CNV	GT	1|1
6	380338	DEL_pindel_17962	CCTCCCCACGGTCTTCCTGGATGGGCTTCAAACCTCCTTTCTGGCCTCTACGCCCTGGGTCCCGCCCCCAGCCCAGA	C	.	PASS	AC=2315;AF=0.46226;AFR_AF=0.4841;AMR_AF=0.4496;AN=5008;CS=DEL_pindel;EAS_AF=0.4474;END=380414;EUR_AF=0.4503;NS=2504;SAS_AF=0.4693;SITEPOST=1;SVTYPE=DEL	GT	1|0
6	666377	EM_DL_DEL10906321	A	<CN0>	100	PASS	AC=2830;AF=0.565096;AFR_AF=0.3714;AMR_AF=0.621;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.7956;END=667821;EUR_AF=0.6004;MC=YL_CN_CEU_1715,YL_CN_PUR_1628,YL_CN_ASW_1430,YL_CN_YRI_1763,YL_CN_JPT_1496,YL_CN_GBR_1322,YL_CN_ITU_1353,YL_CN_PEL_1204,YL_CN_CHB_1375,YL_CN_KHV_1385,YL_CN_CHS_1368,YL_CN_CLM_1158;NS=2504;SAS_AF=0.5133;SVTYPE=DEL	GT	1|1
6	1682791	DEL_pindel_18013	TTCATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3847;AF=0.768171;AFR_AF=0.789;AMR_AF=0.6859;AN=5008;CS=DEL_pindel;EAS_AF=0.7173;END=1683102;EUR_AF=0.8121;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.8057;SITEPOST=0.9913;SVTYPE=DEL_ALU	GT	1|0
6	2568176	UW_VH_2462	A	<CN0>	100	PASS	AC=326;AF=0.0650958;AFR_AF=0.1498;AMR_AF=0.0461;AN=5008;CIEND=0,402;CIPOS=-593,0;CS=DEL_union;EAS_AF=0;END=2571941;EUR_AF=0.0447;MC=YL_CN_PJL_1399,BI_GS_DEL1_B1_P1069_541,EM_DL_DEL81425;NS=2504;SAS_AF=0.0521;SVTYPE=DEL	GT	1|0
6	2605520	DEL_pindel_18046	GGGAAGGAATGAAGGAAGGGAGGGAGGGAGGGAAGGAGGGAAGGGAAGGGAAGGGAAGGAA	G	.	PASS	AC=2970;AF=0.593051;AFR_AF=0.3011;AMR_AF=0.6729;AN=5008;CS=DEL_pindel;EAS_AF=0.753;END=2605580;EUR_AF=0.6481;NS=2504;SAS_AF=0.7096;SITEPOST=0.986;SVTYPE=DEL	GT	1|0
6	2774017	ALU_umary_ALU_4925	T	<INS:ME:ALU>	.	.	AC=391;AF=0.0780751;AFR_AF=0.0492;AMR_AF=0.0692;AN=5008;CS=ALU_umary;EAS_AF=0.0556;EUR_AF=0.1203;MEINFO=AluYa5,16,280,-;NS=2504;SAS_AF=0.1033;SITEPOST=1;SVLEN=264;SVTYPE=ALU;TSD=AAAGAATCAATTAT	GT	1|0
6	4050241	DEL_pindel_18082	TGGAAACAGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAATAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCACAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCA	T	.	PASS	AC=3362;AF=0.671326;AFR_AF=0.6868;AMR_AF=0.683;AN=5008;CS=DEL_pindel;EAS_AF=0.6409;END=4050560;EUR_AF=0.6869;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.6575;SITEPOST=0.9764;SVTYPE=DEL_ALU	GT	0|1
6	5898451	BI_GS_DEL1_B2_P1072_726	T	<CN0>	100	PASS	AC=865;AF=0.172724;AFR_AF=0.1324;AMR_AF=0.2046;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1399;END=5898882;EUR_AF=0.2107;MC=DEL_pindel_18118,UW_VH_2049;NS=2504;SAS_AF=0.1994;SVTYPE=DEL	GT	0|1
6	6068837	DEL_pindel_18123	TCCCTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTATTTATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=1787;AF=0.356829;AFR_AF=0.5242;AMR_AF=0.2925;AN=5008;CS=DEL_pindel;EAS_AF=0.2887;END=6069178;EUR_AF=0.3449;MEINFO=AluYa4_4,2,281,-;NS=2504;SAS_AF=0.2587;SITEPOST=0.9991;SVTYPE=DEL_ALU	GT	1|0
6	6277340	DEL_pindel_18128	TAAGACTGACACTGTGCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2795;AF=0.558107;AFR_AF=0.6793;AMR_AF=0.5331;AN=5008;CS=DEL_pindel;EAS_AF=0.4276;END=6277602;EUR_AF=0.5666;MEINFO=AluY,70,281,+;NS=2504;SAS_AF=0.5378;SITEPOST=0.9932;SVTYPE=DEL_ALU	GT	1|0
6	7717367	DEL_pindel_18171	TAAAGAATGGCTAAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3739;AF=0.746605;AFR_AF=0.7617;AMR_AF=0.7219;AN=5008;CS=DEL_pindel;EAS_AF=0.7698;END=7717702;EUR_AF=0.7227;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.7444;SITEPOST=0.96995;SVTYPE=DEL_ALU	GT	1|0
6	8337673	BI_GS_DEL1_B1_P1075_283	G	<CN0>	100	PASS	AC=850;AF=0.169728;AFR_AF=0.1248;AMR_AF=0.2089;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0169;END=8341524;EUR_AF=0.2783;MC=UW_VH_2051,UW_VH_10234,EM_DL_DEL81768,YL_CN_YRI_1775,UW_VH_4536,UW_VH_14640,UW_VH_7018,UW_VH_19891;NS=2504;SAS_AF=0.2485;SVTYPE=DEL	GT	0|1
6	9014816	DEL_pindel_18213	TAAAAAATGCTCCTCACAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2846;AF=0.568291;AFR_AF=0.711;AMR_AF=0.5908;AN=5008;CS=DEL_pindel;EAS_AF=0.5466;END=9014924;EUR_AF=0.4751;MEINFO=AluYa8,215,282,+;NS=2504;SAS_AF=0.4775;SITEPOST=0.9942;SVTYPE=DEL_ALU	GT	1|1
6	9460377	DEL_pindel_18227	TAAAAATTAATAAACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCATCTCTACTAAAAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2969;AF=0.592851;AFR_AF=0.5598;AMR_AF=0.572;AN=5008;CS=DEL_pindel;EAS_AF=0.7024;END=9460714;EUR_AF=0.5179;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6166;SITEPOST=0.9844;SVTYPE=DEL_ALU	GT	1|0
6	10070792	DEL_pindel_18234	TGTATTACATTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGGGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3371;AF=0.673123;AFR_AF=0.711;AMR_AF=0.6787;AN=5008;CS=DEL_pindel;EAS_AF=0.7312;END=10071105;EUR_AF=0.6034;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6299;SITEPOST=0.9617;SVTYPE=DEL_ALU	GT	0|1
6	10264425	BI_GS_DEL1_B1_P1077_251	G	<CN0>	100	PASS	AC=2994;AF=0.597843;AFR_AF=0.2443;AMR_AF=0.7983;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6577;END=10265263;EUR_AF=0.837;MC=SI_BD_6346;NS=2504;SAS_AF=0.6258;SVTYPE=DEL	GT	1|0
6	10293995	DEL_pindel_18242	ACAAAGTCAACTGGAGTGGAGGACTCTAGCTGGAAAGTACATGGGAAATAACAAAGAAAAGCAGGATGGGGTCAAAAGATGAAAATCTGGAATAGCCCAGGCTATTCCAGGTCTGTAGCCCTCTCAGGTCTGCGCTCTTCTCTTTC	A	.	PASS	AC=1849;AF=0.369209;AFR_AF=0.3011;AMR_AF=0.5605;AN=5008;CS=DEL_pindel;EAS_AF=0.0962;END=10294140;EUR_AF=0.5895;NS=2504;SAS_AF=0.3804;SITEPOST=0.9992;SVTYPE=DEL	GT	1|0
6	11556091	DEL_pindel_18277	TAAAGACTGAGGTACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3839;AF=0.766573;AFR_AF=0.7269;AMR_AF=0.7579;AN=5008;CS=DEL_pindel;EAS_AF=0.7708;END=11556411;EUR_AF=0.7883;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.7996;SITEPOST=0.971;SVTYPE=DEL_ALU	GT	1|1
6	11903436	DEL_pindel_18286	CAAAAGTCTTTAGAGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	C	.	PASS	AC=3152;AF=0.629393;AFR_AF=0.6732;AMR_AF=0.6499;AN=5008;CS=DEL_pindel;EAS_AF=0.5595;END=11903748;EUR_AF=0.7147;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5399;SITEPOST=0.9796;SVTYPE=DEL_ALU	GT	1|0
6	13191033	L1_umary_LINE1_1261	G	<INS:ME:LINE1>	.	.	AC=864;AF=0.172524;AFR_AF=0.0348;AMR_AF=0.1744;AN=5008;CS=L1_umary;EAS_AF=0.252;EUR_AF=0.2237;MEINFO=LINE1,1,6019,+;NS=2504;SAS_AF=0.2229;SITEPOST=1;SVLEN=6018;SVTYPE=LINE1;TSD=AGAATTCAAAATACAAGG	GT	0|1
6	13882549	EM_DL_DEL10912917	A	<CN0>	100	PASS	AC=1662;AF=0.331869;AFR_AF=0.0416;AMR_AF=0.5231;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3373;END=13883852;EUR_AF=0.4095;MC=YL_CN_FIN_1294,YL_CN_BEB_1191,YL_CN_GBR_1335,YL_CN_MXL_1161,YL_CN_GIH_1075,YL_CN_CEU_1730,YL_CN_IBS_1208,YL_CN_STU_1359;NS=2504;SAS_AF=0.5031;SVTYPE=DEL	GT	0|1
6	14745282	BI_GS_DEL1_B5_P1081_1036	C	<CN0>	100	PASS	AC=3843;AF=0.767372;AFR_AF=0.4697;AMR_AF=0.7997;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9802;END=14745689;EUR_AF=0.8569;NS=2504;SAS_AF=0.8354;SVTYPE=DEL	GT	1|1
6	15666751	BI_GS_DEL1_B4_P1082_120	C	<CN0>	100	PASS	AC=660;AF=0.131789;AFR_AF=0.3079;AMR_AF=0.1542;AN=5008;CIEND=-36,37;CIPOS=-36,37;CS=DEL_union;EAS_AF=0.002;END=15667661;EUR_AF=0.0915;MC=SI_BD_6379;NS=2504;SAS_AF=0.0532;SVTYPE=DEL	GT	1|0
6	17376702	YL_CN_ASW_1448	A	<CN0>	100	PASS	AC=479;AF=0.095647;AFR_AF=0.0809;AMR_AF=0.111;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0694;END=17381506;EUR_AF=0.1302;MC=SI_BD_6392,BI_GS_DEL1_B2_P1084_255,UW_VH_536;NS=2504;SAS_AF=0.0961;SVTYPE=DEL	GT	1|0
6	17416398	ALU_umary_ALU_4990	T	<INS:ME:ALU>	.	.	AC=897;AF=0.179113;AFR_AF=0.0651;AMR_AF=0.245;AN=5008;CS=ALU_umary;EAS_AF=0.1101;EUR_AF=0.2714;MEINFO=AluYc1,4,281,-;NS=2504;SAS_AF=0.2628;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=GAGAAAACTCTTTT	GT	1|1
6	17472269	DEL_pindel_18394	TAATAGTGCTGAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2612;AF=0.521565;AFR_AF=0.5802;AMR_AF=0.4265;AN=5008;CS=DEL_pindel;EAS_AF=0.6081;END=17472582;EUR_AF=0.4682;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4755;SITEPOST=0.9908;SVTYPE=DEL_ALU	GT	0|1
6	18346399	ALU_umary_ALU_4996	T	<INS:ME:ALU>	.	.	AC=803;AF=0.160343;AFR_AF=0.177;AMR_AF=0.1441;AN=5008;CS=ALU_umary;EAS_AF=0.0536;EUR_AF=0.163;MEINFO=AluYa4_4,4,281,-;NS=2504;SAS_AF=0.2566;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AGCTTAGGATTATT	GT	1|0
6	18402112	SI_BD_6402	A	<CN0>	100	PASS	AC=3176;AF=0.634185;AFR_AF=0.4682;AMR_AF=0.6787;AN=5008;CIEND=-63,318;CIPOS=-318,50;CS=DEL_union;EAS_AF=0.7768;END=18402924;EUR_AF=0.6302;MC=DEL_pindel_18411,EM_DL_DEL10915393;NS=2504;SAS_AF=0.684;SVTYPE=DEL	GT	1|1
6	18402131	BI_GS_DEL1_B1_P1085_313	T	<CN0>	100	PASS	AC=3169;AF=0.632788;AFR_AF=0.4667;AMR_AF=0.6758;AN=5008;CIEND=-29,30;CIPOS=-29,30;CS=DEL_union;EAS_AF=0.7758;END=18402447;EUR_AF=0.6282;NS=2504;SAS_AF=0.684;SVTYPE=DEL	GT	1|1
6	18943635	DEL_pindel_18429	AACAGGGAAACAAAAACTGTAAAAATGGATTTCACTGTGACTCACTGAATT	A	.	PASS	AC=2052;AF=0.409744;AFR_AF=0.2458;AMR_AF=0.3573;AN=5008;CS=DEL_pindel;EAS_AF=0.63;END=18943685;EUR_AF=0.4841;NS=2504;SAS_AF=0.365;SITEPOST=0.9995;SVTYPE=DEL	GT	1|1
6	19155631	DEL_pindel_18441	TAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1219;AF=0.243411;AFR_AF=0.3253;AMR_AF=0.2911;AN=5008;CS=DEL_pindel;EAS_AF=0.1419;END=19155966;EUR_AF=0.1998;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2485;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|0
6	20259856	DEL_pindel_18456	TCCGGGTGGGCGTGGGCTCAGCGGGCCGGCACTCGGAGTGGCCGGCCGGCCCGC	T	.	PASS	AC=3617;AF=0.722244;AFR_AF=0.7118;AMR_AF=0.768;AN=5008;CS=DEL_pindel;EAS_AF=0.7252;END=20259909;EUR_AF=0.7227;NS=2504;SAS_AF=0.7004;SITEPOST=0.9976;SVTYPE=DEL	GT	1|1
6	20765366	DEL_pindel_18474	TGGTTACATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2815;AF=0.562101;AFR_AF=0.5159;AMR_AF=0.5389;AN=5008;CS=DEL_pindel;EAS_AF=0.6696;END=20765686;EUR_AF=0.4543;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6411;SITEPOST=0.9979;SVTYPE=DEL_ALU	GT	1|0
6	22227472	DEL_pindel_18501	TGAAAAACTTGTGGGAGGCCGAGGCATGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACGGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAGAAAAAAAAAGAA	T	.	PASS	AC=4577;AF=0.913938;AFR_AF=0.913;AMR_AF=0.915;AN=5008;CS=DEL_pindel;EAS_AF=0.9306;END=22227754;EUR_AF=0.8887;MEINFO=AluY,38,281,+;NS=2504;SAS_AF=0.9233;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|1
6	23685987	DEL_pindel_18534	TAAAAAAAAAACAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAACA	T	.	PASS	AC=1019;AF=0.203474;AFR_AF=0.1694;AMR_AF=0.1902;AN=5008;CS=DEL_pindel;EAS_AF=0.1786;END=23686315;EUR_AF=0.2843;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2014;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	0|1
6	23978361	ALU_umary_ALU_5026	C	<INS:ME:ALU>	.	.	AC=2480;AF=0.495208;AFR_AF=0.6324;AMR_AF=0.4352;AN=5008;CS=ALU_umary;EAS_AF=0.25;EUR_AF=0.5517;MEINFO=AluUndef,3,277,+;NS=2504;SAS_AF=0.547;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAAAATGACAACCATGCC	GT	1|1
6	24811806	YL_CN_TSI_1299	T	<CN0>	100	PASS	AC=3797;AF=0.758187;AFR_AF=0.4796;AMR_AF=0.8401;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8879;END=24818032;EUR_AF=0.839;MC=UW_VH_544,BI_GS_DEL1_B5_P1091_972;MEINFO=LINE1,2,6019,-;NS=2504;SAS_AF=0.8599;SVTYPE=DEL_LINE1	GT	1|1
6	25529870	DEL_pindel_18577	TAAGAATAGGCTGCTAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCCGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1909;AF=0.38119;AFR_AF=0.3608;AMR_AF=0.3746;AN=5008;CS=DEL_pindel;EAS_AF=0.3978;END=25530011;EUR_AF=0.3738;MEINFO=AluYb,191,281,+;NS=2504;SAS_AF=0.4039;SITEPOST=0.9966;SVTYPE=DEL_ALU	GT	1|0
6	26678936	DUP_gs_CNV_6_26678936_26686491	G	<CN0>,<CN2>,<CN3>	.	PASS	AC=3,4481,0;AF=0.00059904,0.894768,0;AFR_AF=0.0023,0.6596,0;AMR_AF=0,0.9308,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.9812,0;END=26686491;EUR_AF=0,0.9911,0;NS=2504;SAS_AF=0,0.999,0;SITEPOST=0.9999;SVTYPE=CNV	GT	2|2
6	26739614	DUP_gs_CNV_6_26739614_26748928	A	<CN0>,<CN2>	.	PASS	AC=1879,555;AF=0.3752,0.110823;AFR_AF=0.0484,0.3487;AMR_AF=0.4179,0.072;AN=5008;CS=DUP_gs;EAS_AF=0.621,0.0278;END=26748928;EUR_AF=0.3698,0.0129;NS=2504;SAS_AF=0.5389,0.0031;SITEPOST=1;SVTYPE=CNV	GT	0|1
6	28190195	DEL_pindel_18625	TTATTATCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2520;AF=0.503195;AFR_AF=0.7337;AMR_AF=0.4164;AN=5008;CS=DEL_pindel;EAS_AF=0.499;END=28190532;EUR_AF=0.333;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.4325;SITEPOST=0.9923;SVTYPE=DEL_ALU	GT	0|1
6	29363897	DEL_pindel_18637	TATCTTCCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCC	T	.	PASS	AC=3595;AF=0.717851;AFR_AF=0.7307;AMR_AF=0.6542;AN=5008;CS=DEL_pindel;EAS_AF=0.6825;END=29364040;EUR_AF=0.7276;MEINFO=AluYa,175,281,-;NS=2504;SAS_AF=0.772;SITEPOST=0.9885;SVTYPE=DEL_ALU	GT	1|0
6	29843522	EM_DL_DEL82419	C	<CN0>	100	PASS	AC=2921;AF=0.583267;AFR_AF=0.6339;AMR_AF=0.621;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.4613;END=29849190;EUR_AF=0.6421;MC=YL_CN_ITU_1384,UW_VH_3984;NS=2504;SAS_AF=0.5532;SVTYPE=DEL	GT	1|1
6	29899944	YL_CN_CEU_1759	G	<CN0>	100	PASS	AC=4164;AF=0.83147;AFR_AF=0.8283;AMR_AF=0.8372;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8681;END=29901525;EUR_AF=0.7913;NS=2504;SAS_AF=0.8354;SVTYPE=DEL	GT	1|1
6	29998496	ALU_umary_ALU_5055	C	<INS:ME:ALU>	.	.	AC=720;AF=0.14377;AFR_AF=0.0817;AMR_AF=0.1009;AN=5008;CS=ALU_umary;EAS_AF=0.1458;EUR_AF=0.1928;MEINFO=AluUndef,1,228,+;NS=2504;SAS_AF=0.2055;SITEPOST=1;SVLEN=227;SVTYPE=ALU;TSD=AAAAAAACTTCTTTC	GT	1|0
6	30207801	BI_GS_DEL1_B3_P1097_6	A	<CN0>	100	PASS	AC=1511;AF=0.301717;AFR_AF=0.3593;AMR_AF=0.3718;AN=5008;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.2619;END=30208224;EUR_AF=0.3241;NS=2504;SAS_AF=0.1922;SVTYPE=DEL	GT	0|1
6	30230519	DEL_pindel_18656	TTTTTTTTCAACAGAGGTGAGGCTGGGACATTTCTATTCATGTCTTAACTTTTAAGTTTCACTGAGCTGCCAC	T	.	PASS	AC=411;AF=0.0820687;AFR_AF=0.1104;AMR_AF=0.062;AN=5008;CS=DEL_pindel;EAS_AF=0.0496;END=30230591;EUR_AF=0.1123;NS=2504;SAS_AF=0.0603;SITEPOST=0.9999;SVTYPE=DEL	GT	1|0
6	30886430	DEL_pindel_18661	AACCCTGGGTTCCTATAAACACTGCTCCTACTTTTTTCTAGTCACTCCTGGGGGCCTCTTCCACCTTGACTACTCCCTGCCCCTTCCCCTTTCCAGTTCTACTGCCTTTAGCTATGTTGGCAGTGAGAGGTGAGGATGATG	A	.	PASS	AC=189;AF=0.0377396;AFR_AF=0.0318;AMR_AF=0.0231;AN=5008;CS=DEL_pindel;EAS_AF=0.0169;END=30886570;EUR_AF=0.0736;NS=2504;SAS_AF=0.0409;SITEPOST=0.9983;SVTYPE=DEL	GT	1|0
6	31292091	BI_GS_DEL1_B2_P1098_218	G	<CN0>	100	PASS	AC=3151;AF=0.629193;AFR_AF=0.7587;AMR_AF=0.5317;AN=5008;CIEND=-54,55;CIPOS=-54,55;CS=DEL_union;EAS_AF=0.495;END=31293878;EUR_AF=0.6372;MC=YL_CN_KHV_1438,YL_CN_YRI_1810,EM_DL_DEL10921745,YL_CN_LWK_1353,YL_CN_GBR_1367,SI_BD_6482,YL_CN_PJL_1447,YL_CN_STU_1388;NS=2504;SAS_AF=0.6534;SVTYPE=DEL	GT	1|1
6	32313768	DEL_pindel_18709	TGTCATATCCTCATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACAGCGCTCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3092;AF=0.617412;AFR_AF=0.5681;AMR_AF=0.6196;AN=5008;CS=DEL_pindel;EAS_AF=0.6369;END=32314091;EUR_AF=0.6153;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6646;SITEPOST=0.9919;SVTYPE=DEL_ALU	GT	1|0
6	32454946	BI_GS_DEL1_B4_P1099_107	T	<CN0>	100	PASS	AC=4144;AF=0.827476;AFR_AF=0.8608;AMR_AF=0.9006;AN=5008;CIEND=-62,63;CIPOS=-62,63;CS=DEL_union;EAS_AF=0.7887;END=32478407;EUR_AF=0.8598;NS=2504;SAS_AF=0.7372;SVTYPE=DEL	GT	1|1
6	32461337	BI_GS_DEL1_B2_P1099_323	G	<CN0>	100	PASS	AC=4147;AF=0.828075;AFR_AF=0.8608;AMR_AF=0.9006;AN=5008;CIEND=-62,62;CIPOS=-62,62;CS=DEL_union;EAS_AF=0.7887;END=32468848;EUR_AF=0.8628;MC=EM_DL_DEL82968;NS=2504;SAS_AF=0.7372;SVTYPE=DEL	GT	1|1
6	32494142	SI_BD_6494	T	<CN0>	100	PASS	AC=3617;AF=0.722244;AFR_AF=0.7738;AMR_AF=0.8256;AN=5008;CIEND=-50,126;CIPOS=-126,50;CS=DEL_union;EAS_AF=0.6687;END=32494484;EUR_AF=0.7694;NS=2504;SAS_AF=0.5859;SVTYPE=DEL	GT	1|1
6	32499300	BI_GS_DEL1_B3_P1099_31	A	<CN0>	100	PASS	AC=4057;AF=0.810104;AFR_AF=0.8374;AMR_AF=0.889;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.7728;END=32500806;EUR_AF=0.8459;MC=YL_CN_YRI_1822,YL_CN_CEU_1776,YL_CN_GWD_1950,YL_CN_CHB_1435,YL_CN_CLM_1212,YL_CN_FIN_1333,YL_CN_JPT_1552,YL_CN_CHS_1427,YL_CN_GBR_1379,YL_CN_MXL_1198,SI_BD_6495,YL_CN_ASW_1480,YL_CN_GIH_1109,YL_CN_PEL_1268;NS=2504;SAS_AF=0.7188;SVTYPE=DEL	GT	1|1
6	32512660	BI_GS_DEL1_B1_P1099_367	T	<CN0>	100	PASS	AC=3494;AF=0.697684;AFR_AF=0.7231;AMR_AF=0.7334;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7252;END=32513019;EUR_AF=0.6759;NS=2504;SAS_AF=0.6319;SVTYPE=DEL	GT	1|1
6	32514808	EM_DL_DEL10922561	T	<CN0>	100	PASS	AC=4065;AF=0.811701;AFR_AF=0.8464;AMR_AF=0.8847;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.7738;END=32516265;EUR_AF=0.8419;MC=SI_BD_6497,BI_GS_DEL1_B1_P1099_369,YL_CN_GBR_1381,YL_CN_ESN_1483;NS=2504;SAS_AF=0.7209;SVTYPE=DEL	GT	1|1
6	32571334	BI_GS_DEL1_B4_P1099_131	A	<CN0>	100	PASS	AC=3648;AF=0.728435;AFR_AF=0.77;AMR_AF=0.7565;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.746;END=32571609;EUR_AF=0.669;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.6953;SVTYPE=DEL_ALU	GT	1|1
6	32604936	DUP_gs_CNV_6_32604936_32616132	A	<CN0>,<CN2>	.	PASS	AC=1897,1605;AF=0.378794,0.320487;AFR_AF=0.354,0.3396;AMR_AF=0.4337,0.2248;AN=5008;CS=DUP_gs;EAS_AF=0.3929,0.3492;END=32616132;EUR_AF=0.4056,0.3171;NS=2504;SAS_AF=0.3313,0.3364;SITEPOST=0.9966;SVTYPE=CNV	GT	1|0
6	32614932	BI_GS_DEL1_B5_P1099_522	G	<CN0>	100	PASS	AC=2504;AF=0.5;AFR_AF=0.4516;AMR_AF=0.6614;AN=5008;CIEND=-21,21;CIPOS=-21,21;CS=DEL_union;EAS_AF=0.4742;END=32615252;EUR_AF=0.5408;MC=SI_BD_6507;NS=2504;SAS_AF=0.4356;SVTYPE=DEL	GT	1|1
6	32623533	BI_GS_DEL1_B1_P1099_422	A	<CN0>	100	PASS	AC=2775;AF=0.554113;AFR_AF=0.5076;AMR_AF=0.7075;AN=5008;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.5427;END=32624604;EUR_AF=0.5885;NS=2504;SAS_AF=0.4847;SVTYPE=DEL	GT	1|1
6	32624896	BI_GS_DEL1_B5_P1099_530	A	<CN0>	100	PASS	AC=2775;AF=0.554113;AFR_AF=0.5083;AMR_AF=0.7089;AN=5008;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.5357;END=32625863;EUR_AF=0.5905;MC=SI_BD_6508,EM_DL_DEL10923034;NS=2504;SAS_AF=0.4877;SVTYPE=DEL	GT	1|1
6	32676558	UW_VH_549	C	<CN0>	100	PASS	AC=3649;AF=0.728634;AFR_AF=0.671;AMR_AF=0.7911;AN=5008;CIEND=0,435;CIPOS=-460,0;CS=DEL_union;EAS_AF=0.8135;END=32677026;EUR_AF=0.6521;NS=2504;SAS_AF=0.7536;SVTYPE=DEL	GT	0|1
6	32778682	UW_VH_5456	C	<CN0>	100	PASS	AC=3231;AF=0.645168;AFR_AF=0.5053;AMR_AF=0.5951;AN=5008;CIEND=0,473;CIPOS=-384,0;CS=DEL_union;EAS_AF=0.6845;END=32779821;EUR_AF=0.669;MC=EM_DL_DEL10924276,YL_CN_CEU_1788,YL_CN_CHS_1442,YL_CN_STU_1420,YL_CN_BEB_1246,YL_CN_ITU_1421,YL_CN_JPT_1566,YL_CN_PEL_1279,YL_CN_GWD_1968,YL_CN_PUR_1713,YL_CN_PJL_1475,SI_BD_6511,YL_CN_KHV_1465;NS=2504;SAS_AF=0.8047;SVTYPE=DEL	GT	1|0
6	33026721	BI_GS_DEL1_B2_P1100_23	T	<CN0>	100	PASS	AC=2225;AF=0.444289;AFR_AF=0.5877;AMR_AF=0.2853;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6806;END=33028605;EUR_AF=0.1889;MC=UW_VH_5573,YL_CN_ASW_1493;NS=2504;SAS_AF=0.3824;SVTYPE=DEL	GT	1|0
6	33030313	SVA_umary_SVA_282	T	<INS:ME:SVA>	.	.	AC=1692;AF=0.337859;AFR_AF=0.4115;AMR_AF=0.2305;AN=5008;CS=SVA_umary;EAS_AF=0.5694;EUR_AF=0.1551;MEINFO=SVA,133,1627,-;NS=2504;SAS_AF=0.2638;SITEPOST=1;SVLEN=1494;SVTYPE=SVA;TSD=CTCTTTTTCTT	GT	1|0
6	33093407	DEL_pindel_18722	TAAAATGACAAGGCTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAGCCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1984;AF=0.396166;AFR_AF=0.2269;AMR_AF=0.3573;AN=5008;CS=DEL_pindel;EAS_AF=0.4355;END=33093738;EUR_AF=0.4145;MEINFO=AluYb5,1,281,+;NS=2504;SAS_AF=0.593;SITEPOST=0.9993;SVTYPE=DEL_ALU	GT	0|1
6	33583080	YL_CN_ASW_1494	G	<CN0>	100	PASS	AC=1965;AF=0.392372;AFR_AF=0.4062;AMR_AF=0.2493;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.5337;END=33585984;EUR_AF=0.2396;MC=BI_GS_DEL1_B5_P1100_547,SI_BD_6521,EM_DL_DEL83318,UW_VH_2796;NS=2504;SAS_AF=0.4867;SVTYPE=DEL	GT	1|0
6	34699946	BI_GS_DEL1_B1_P1101_535	A	<CN0>	100	PASS	AC=2321;AF=0.463458;AFR_AF=0.7685;AMR_AF=0.3127;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4573;END=34701100;EUR_AF=0.338;MC=SI_BD_6536,EM_DL_DEL10925086,YL_CN_PUR_1725;NS=2504;SAS_AF=0.2935;SVTYPE=DEL	GT	0|1
6	35626431	BI_GS_DEL1_B5_P1102_679	G	<CN0>	100	PASS	AC=3188;AF=0.636581;AFR_AF=0.5446;AMR_AF=0.6383;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6895;END=35629746;EUR_AF=0.67;MC=SI_BD_6541,UW_VH_550,EM_DL_DEL83370,YL_CN_MXL_1215;NS=2504;SAS_AF=0.6708;SVTYPE=DEL	GT	1|0
6	35649830	DEL_pindel_18764	ATGTAAATTACCCTGTTAGGTTTCAATGAAACACCTTTTCTCTTGTAACAAACATCTCCTCCAAGCTAGAATTTCAAAACAG	A	.	PASS	AC=407;AF=0.08127;AFR_AF=0.2179;AMR_AF=0.0836;AN=5008;CS=DEL_pindel;EAS_AF=0.0417;END=35649911;EUR_AF=0.0149;NS=2504;SAS_AF=0.0041;SITEPOST=0.9995;SVTYPE=DEL	GT	0|1
6	35754684	DUP_gs_CNV_6_35754684_35766728	G	<CN2>,<CN3>	.	PASS	AC=2161,114;AF=0.43151,0.0227636;AFR_AF=0.4758,0.0401;AMR_AF=0.3963,0.0202;AN=5008;CS=DUP_gs;EAS_AF=0.3502,0.0169;END=35766728;EUR_AF=0.4911,0.0189;NS=2504;SAS_AF=0.4192,0.0112;SITEPOST=1;SVTYPE=CNV	GT	0|1
6	38071246	DEL_pindel_18811	TATATATATACACACATATATACACGTGTATATATATACACGTGTATATATACAC	T	.	PASS	AC=1537;AF=0.306909;AFR_AF=0.2958;AMR_AF=0.3746;AN=5008;CS=DEL_pindel;EAS_AF=0.2173;END=38071300;EUR_AF=0.3678;NS=2504;SAS_AF=0.3037;SITEPOST=0.9906;SVTYPE=DEL	GT	1|0
6	38498278	DEL_pindel_18824	TGGCCCAACTGTAAAATTCCTCTCTTTGTACTGTCTCTGTTTATTTCTCAGCTGGCCGACACTTATGGAAAATAGAAAGAACCTACATTGAAATATTGGGGGTGGGTTCCCCCAATACTCACAAAACAAACTAAATAA	T	.	PASS	AC=504;AF=0.100639;AFR_AF=0.0651;AMR_AF=0.1398;AN=5008;CS=DEL_pindel;EAS_AF=0.0228;END=38498415;EUR_AF=0.1988;NS=2504;SAS_AF=0.1002;SITEPOST=0.9986;SVTYPE=DEL	GT	1|0
6	38922187	DEL_pindel_18831	TAATAAATTACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4054;AF=0.809505;AFR_AF=0.8306;AMR_AF=0.7464;AN=5008;CS=DEL_pindel;EAS_AF=0.8869;END=38922502;EUR_AF=0.7843;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.772;SITEPOST=0.99065;SVTYPE=DEL_ALU	GT	1|1
6	41953350	DEL_pindel_18863	GCCAGTTTAAGTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGGTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=4099;AF=0.81849;AFR_AF=0.8147;AMR_AF=0.8458;AN=5008;CS=DEL_pindel;EAS_AF=0.8194;END=41953665;EUR_AF=0.7863;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.8364;SITEPOST=0.9514;SVTYPE=DEL_ALU	GT	1|1
6	47312788	ALU_umary_ALU_5141	C	<INS:ME:ALU>	.	.	AC=923;AF=0.184305;AFR_AF=0.1233;AMR_AF=0.1527;AN=5008;CS=ALU_umary;EAS_AF=0.2004;EUR_AF=0.2435;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2117;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAATAAAGAGCCCCTGC	GT	1|1
6	47564668	UW_VH_3206	A	<CN0>	100	PASS	AC=106;AF=0.0211661;AFR_AF=0.0038;AMR_AF=0.0274;AN=5008;CIEND=0,304;CIPOS=-290,0;CS=DEL_union;EAS_AF=0.001;END=47566948;EUR_AF=0.0596;MC=BI_GS_DEL1_B5_P1114_685,SI_BD_6593,YL_CN_STU_1436,EM_DL_DEL83560;NS=2504;SAS_AF=0.0215;SVTYPE=DEL	GT	0|1
6	48286295	DEL_pindel_18995	CTGATAGTATGTATCAGTTTATTTTTTATTCTAAAATCACAATTTGCTTCTTGCT	C	.	PASS	AC=111;AF=0.0221645;AFR_AF=0.0129;AMR_AF=0.0101;AN=5008;CS=DEL_pindel;EAS_AF=0.0327;END=48286349;EUR_AF=0.0159;NS=2504;SAS_AF=0.0389;SITEPOST=0.9996;SVTYPE=DEL	GT	0|1
6	50765956	DEL_pindel_19061	TAAGAATAGGTTTAACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	.	PASS	AC=2035;AF=0.40635;AFR_AF=0.4909;AMR_AF=0.3458;AN=5008;CS=DEL_pindel;EAS_AF=0.3651;END=50766267;EUR_AF=0.4592;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.3231;SITEPOST=0.9996;SVTYPE=DEL_ALU	GT	0|1
6	51300093	ALU_umary_ALU_5167	C	<INS:ME:ALU>	.	.	AC=162;AF=0.0323482;AFR_AF=0.034;AMR_AF=0.0389;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0825;MEINFO=AluUndef,5,280,+;NS=2504;SAS_AF=0.0072;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AATAATTTATATTTTC	GT	0|1
6	51517349	DEL_pindel_19080	TTATCTCTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3798;AF=0.758387;AFR_AF=0.7632;AMR_AF=0.7493;AN=5008;CS=DEL_pindel;EAS_AF=0.7917;END=51517675;EUR_AF=0.7266;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7566;SITEPOST=0.9664;SVTYPE=DEL_ALU	GT	0|1
6	51736109	BI_GS_DEL1_B3_P1118_37	A	<CN0>	100	PASS	AC=1454;AF=0.290335;AFR_AF=0.23;AMR_AF=0.3199;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0714;END=51736805;EUR_AF=0.5318;MC=SI_BD_6615,DEL_pindel_19087,UW_VH_555;NS=2504;SAS_AF=0.3282;SVTYPE=DEL	GT	1|1
6	51929672	ALU_umary_ALU_5171	A	<INS:ME:ALU>	.	.	AC=1517;AF=0.302915;AFR_AF=0.3585;AMR_AF=0.2046;AN=5008;CS=ALU_umary;EAS_AF=0.3581;EUR_AF=0.2117;MEINFO=AluUndef,1,263,-;NS=2504;SAS_AF=0.3344;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=null	GT	0|1
6	52691458	ALU_umary_ALU_5178	G	<INS:ME:ALU>	.	.	AC=1804;AF=0.360224;AFR_AF=0.292;AMR_AF=0.3372;AN=5008;CS=ALU_umary;EAS_AF=0.4187;EUR_AF=0.4115;MEINFO=AluUndef,45,253,-;NS=2504;SAS_AF=0.3558;SITEPOST=1;SVLEN=208;SVTYPE=ALU;TSD=null	GT	0|1
6	53648758	ALU_umary_ALU_5184	A	<INS:ME:ALU>	.	.	AC=1919;AF=0.383187;AFR_AF=0.2655;AMR_AF=0.3919;AN=5008;CS=ALU_umary;EAS_AF=0.5536;EUR_AF=0.3419;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4029;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGGCATATAAA	GT	1|0
6	53928702	UW_VH_1777	T	<CN0>	100	PASS	AC=2137;AF=0.426717;AFR_AF=0.0825;AMR_AF=0.4654;AN=5008;CIEND=0,397;CIPOS=-321,0;CS=DEL_union;EAS_AF=0.5079;END=53934820;EUR_AF=0.673;MC=BI_GS_DEL1_B1_P1120_858,YL_CN_FIN_1359,EM_DL_DEL83955;NS=2504;SAS_AF=0.5276;SVTYPE=DEL	GT	0|1
6	54556435	DEL_pindel_19146	TAAAAGAATGTCCCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3761;AF=0.750998;AFR_AF=0.7451;AMR_AF=0.7219;AN=5008;CS=DEL_pindel;EAS_AF=0.7302;END=54556770;EUR_AF=0.7773;MEINFO=AluYa3_4,1,281,+;NS=2504;SAS_AF=0.774;SITEPOST=0.9567;SVTYPE=DEL_ALU	GT	1|0
6	54846372	UW_VH_2304	A	<CN0>	100	PASS	AC=148;AF=0.0295527;AFR_AF=0.0219;AMR_AF=0.0389;AN=5008;CIEND=0,385;CIPOS=-363,0;CS=DEL_union;EAS_AF=0;END=54851449;EUR_AF=0.0557;MC=BI_GS_DEL1_B1_P1121_666,SI_BD_6644,YL_CN_GIH_1130,EM_DL_DEL84222;NS=2504;SAS_AF=0.0368;SVTYPE=DEL	GT	0|1
6	57268496	DUP_gs_CNV_6_57268496_57297686	T	<CN2>,<CN3>	.	PASS	AC=5003,4;AF=0.999002,0.00079872;AFR_AF=0.9985,0.0015;AMR_AF=0.9971,0.0014;AN=5008;CS=DUP_gs;EAS_AF=1,0;END=57297686;EUR_AF=0.999,0.001;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
6	57450653	DUP_gs_CNV_6_57450653_57479094	T	<CN2>,<CN3>	.	PASS	AC=4997,5;AF=0.997804,0.0009984;AFR_AF=0.9939,0.0023;AMR_AF=0.9986,0;AN=5008;CS=DUP_gs;EAS_AF=1,0;END=57479094;EUR_AF=0.998,0.002;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
6	57733728	DEL_pindel_19172	CTTGGAAGAACTGCTCAGCCATCCACAATTATTGATTGCTTCCTCTGTGTACAGCACCGTGAAAGCAGCTGAGGGACAAAAAGAAGTATAAAACCTA	C	.	PASS	AC=576;AF=0.115016;AFR_AF=0.2466;AMR_AF=0.1081;AN=5008;CS=DEL_pindel;EAS_AF=0.0288;END=57733824;EUR_AF=0.0905;NS=2504;SAS_AF=0.0562;SITEPOST=0.9255;SVTYPE=DEL	GT	1|0
6	62924290	BI_GS_DEL1_B3_P1129_39	A	<CN0>	100	PASS	AC=48;AF=0.00958466;AFR_AF=0.0008;AMR_AF=0.013;AN=5008;CIEND=-21,21;CIPOS=-21,21;CS=DEL_union;EAS_AF=0;END=62929121;EUR_AF=0.0328;MC=YL_CN_IBS_1292,UW_VH_2305;NS=2504;SAS_AF=0.0051;SVTYPE=DEL	GT	0|1
6	63597637	BI_GS_DEL1_B5_P1130_581	T	<CN0>	100	PASS	AC=864;AF=0.172524;AFR_AF=0.0295;AMR_AF=0.2032;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2679;END=63598983;EUR_AF=0.2286;MC=YL_CN_BEB_1282,EM_DL_DEL10935626,SI_BD_6687,UW_VH_1462,YL_CN_TSI_1387,YL_CN_ITU_1460;NS=2504;SAS_AF=0.1881;SVTYPE=DEL	GT	1|0
6	64666468	BI_GS_DEL1_B2_P1131_397	C	<CN0>	100	PASS	AC=536;AF=0.107029;AFR_AF=0.0106;AMR_AF=0.2363;AN=5008;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.0675;END=64668402;EUR_AF=0.1879;NS=2504;SAS_AF=0.1033;SVTYPE=DEL	GT	1|0
6	64667011	BI_GS_DEL1_B2_P1131_400	A	<CN0>	100	PASS	AC=893;AF=0.178315;AFR_AF=0.0129;AMR_AF=0.366;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1587;END=64668349;EUR_AF=0.2773;MC=EM_DL_DEL10935933,YL_CN_ITU_1463,YL_CN_CEU_1836;NS=2504;SAS_AF=0.1871;SVTYPE=DEL	GT	1|0
6	65006421	DEL_pindel_19218	ATTGTACTGGCAGAATATATATATATATATATATATATATATATATATATATATATACATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT	A	.	PASS	AC=3620;AF=0.722843;AFR_AF=0.612;AMR_AF=0.7522;AN=5008;CS=DEL_pindel;EAS_AF=0.6875;END=65006515;EUR_AF=0.7942;NS=2504;SAS_AF=0.8149;SITEPOST=0.98835;SVTYPE=DEL	GT	1|0
6	65710974	BI_GS_DEL1_B2_P1132_466	G	<CN0>	100	PASS	AC=614;AF=0.122604;AFR_AF=0.0068;AMR_AF=0.111;AN=5008;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.2242;END=65715701;EUR_AF=0.163;MC=EM_DL_DEL84741,YL_CN_GBR_1428,UW_VH_2721,UW_VH_560,UW_VH_11572;NS=2504;SAS_AF=0.1411;SVTYPE=DEL	GT	1|1
6	66163982	ALU_umary_ALU_5227	T	<INS:ME:ALU>	.	.	AC=874;AF=0.174521;AFR_AF=0.0946;AMR_AF=0.1945;AN=5008;CS=ALU_umary;EAS_AF=0.1954;EUR_AF=0.2177;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2025;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CTATTTTTCATTTTTT	GT	0|1
6	66260136	SI_BD_6703	C	<CN0>	100	PASS	AC=4104;AF=0.819489;AFR_AF=0.9463;AMR_AF=0.804;AN=5008;CIEND=-86,99;CIPOS=-99,50;CS=DEL_union;EAS_AF=0.8393;END=66262101;EUR_AF=0.673;NS=2504;SAS_AF=0.7894;SVTYPE=DEL	GT	0|1
6	67009228	YL_CN_PJL_1528	A	<CN0>	100	PASS	AC=156;AF=0.0311502;AFR_AF=0.0023;AMR_AF=0.0519;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=67049033;EUR_AF=0.0755;MC=DUP_uwash_chr6_67008487_67049415,UW_VH_9113,BI_GS_DEL1_B2_P1134_7,UW_VH_3461,UW_VH_23908;NS=2504;SAS_AF=0.0419;SVTYPE=DEL	GT	0|1
6	67024956	BI_GS_DEL1_B5_P1134_20	T	<CN0>	100	PASS	AC=163;AF=0.0325479;AFR_AF=0.0182;AMR_AF=0.0504;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=67027285;EUR_AF=0.0666;MC=UW_VH_12464,SI_BD_6710;NS=2504;SAS_AF=0.0378;SVTYPE=DEL	GT	1|0
6	67040806	UW_VH_13167	C	<CN0>	100	PASS	AC=977;AF=0.195088;AFR_AF=0.1725;AMR_AF=0.2176;AN=5008;CIEND=0,353;CIPOS=-393,0;CS=DEL_union;EAS_AF=0.1756;END=67043182;EUR_AF=0.2565;MC=BI_GS_DEL1_B2_P1134_25,YL_CN_GWD_2042,YL_CN_CHB_1498,YL_CN_CEU_1842,UW_VH_6172,UW_VH_1778,YL_CN_CLM_1271,SI_BD_6711;NS=2504;SAS_AF=0.1667;SVTYPE=DEL	GT	0|1
6	68311311	ALU_umary_ALU_5237	T	<INS:ME:ALU>	.	.	AC=2548;AF=0.508786;AFR_AF=0.4455;AMR_AF=0.4697;AN=5008;CS=ALU_umary;EAS_AF=0.6508;EUR_AF=0.502;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4826;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TTTTTGCCAGTATTTT	GT	1|1
6	68314068	ALU_umary_ALU_5238	T	<INS:ME:ALU>	.	.	AC=2808;AF=0.560703;AFR_AF=0.5197;AMR_AF=0.5648;AN=5008;CS=ALU_umary;EAS_AF=0.5863;EUR_AF=0.5547;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.593;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGATTTGGTATATACATTT	GT	0|1
6	70190684	UW_VH_563	C	<CN0>	100	PASS	AC=1394;AF=0.278355;AFR_AF=0.0643;AMR_AF=0.3199;AN=5008;CIEND=0,441;CIPOS=-413,0;CS=DEL_union;EAS_AF=0.3442;END=70192285;EUR_AF=0.3598;MC=YL_CN_GBR_1431,BI_GS_DEL1_B2_P1137_136,SI_BD_6739,YL_CN_TSI_1397,YL_CN_ITU_1470;NS=2504;SAS_AF=0.3865;SVTYPE=DEL	GT	1|0
6	72863591	YL_CN_STU_1469	C	<CN0>	100	PASS	AC=882;AF=0.176118;AFR_AF=0.0393;AMR_AF=0.2205;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1677;END=72873663;EUR_AF=0.2644;MC=SI_BD_6758,UW_VH_21097,UW_VH_1463,YL_CN_MSL_1403,BI_GS_DEL1_B1_P1139_754,EM_DL_DEL85153,UW_VH_12504;NS=2504;SAS_AF=0.2474;SVTYPE=DEL	GT	0|1
6	73221994	UW_VH_2059	T	<CN0>	100	PASS	AC=344;AF=0.0686901;AFR_AF=0.0098;AMR_AF=0.0879;AN=5008;CIEND=0,347;CIPOS=-516,0;CS=DEL_union;EAS_AF=0.0089;END=73222816;EUR_AF=0.164;MC=BI_GS_DEL1_B4_P1140_53,EM_DL_DEL10939082;NS=2504;SAS_AF=0.0982;SVTYPE=DEL	GT	0|1
6	74156152	DEL_pindel_19403	GAAAAAAAAAAATCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCGCCGGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	G	.	PASS	AC=1350;AF=0.269569;AFR_AF=0.3283;AMR_AF=0.1988;AN=5008;CS=DEL_pindel;EAS_AF=0.252;END=74156478;EUR_AF=0.2217;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3078;SITEPOST=0.9901;SVTYPE=DEL_ALU	GT	0|1
6	74421253	DEL_pindel_19414	TTAAGTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3198;AF=0.638578;AFR_AF=0.6067;AMR_AF=0.7061;AN=5008;CS=DEL_pindel;EAS_AF=0.5238;END=74421559;EUR_AF=0.7873;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5992;SITEPOST=0.9917;SVTYPE=DEL_ALU	GT	1|1
6	74504855	ALU_umary_ALU_5280	G	<INS:ME:ALU>	.	.	AC=1985;AF=0.396366;AFR_AF=0.4871;AMR_AF=0.3862;AN=5008;CS=ALU_umary;EAS_AF=0.4127;EUR_AF=0.3907;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.2699;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGATTTAGTTTTTCTGG	GT	1|0
6	74591999	DUP_gs_CNV_6_74591999_74602382	G	<CN0>,<CN2>	.	PASS	AC=1576,1;AF=0.314696,0.00019968;AFR_AF=0.1823,0.0008;AMR_AF=0.3804,0;AN=5008;CS=DUP_gs;EAS_AF=0.3294,0;END=74602382;EUR_AF=0.3668,0;MC=UW_VH_12445,UW_VH_10874,SI_BD_6770,UW_VH_10975,UW_VH_21110,UW_VH_12927,UW_VH_6209,EM_DL_DEL85185,YL_CN_LWK_1431,UW_VH_2179,BI_GS_DEL1_B1_P1141_389;NS=2504;SAS_AF=0.3783,0;SITEPOST=1;SVTYPE=CNV	GT	1|0
6	74613607	UW_VH_20	C	<CN0>	100	PASS	AC=699;AF=0.139577;AFR_AF=0.0688;AMR_AF=0.1599;AN=5008;CIEND=0,453;CIPOS=-574,0;CS=DEL_union;EAS_AF=0.0794;END=74620405;EUR_AF=0.2694;MC=YL_CN_BEB_1296,BI_GS_DEL1_B1_P1141_403,EM_DL_DEL85192;NS=2504;SAS_AF=0.1493;SVTYPE=DEL	GT	0|1
6	74832472	UW_VH_2590	T	<CN0>	100	PASS	AC=121;AF=0.0241613;AFR_AF=0.0015;AMR_AF=0.0375;AN=5008;CIEND=0,347;CIPOS=-434,0;CS=DEL_union;EAS_AF=0.0079;END=74833461;EUR_AF=0.0646;MC=DEL_pindel_19427,BI_GS_DEL1_B5_P1141_831,SI_BD_6773;NS=2504;SAS_AF=0.0204;SVTYPE=DEL	GT	0|1
6	74932705	UW_VH_25122	C	<CN0>	100	PASS	AC=2284;AF=0.45607;AFR_AF=0.2231;AMR_AF=0.5014;AN=5008;CIEND=0,416;CIPOS=-355,0;CS=DEL_union;EAS_AF=0.5357;END=74933071;EUR_AF=0.5408;MC=BI_GS_DEL1_B5_P1141_957;NS=2504;SAS_AF=0.5695;SVTYPE=DEL	GT	1|1
6	74932723	UW_VH_567	C	<CN0>	100	PASS	AC=2284;AF=0.45607;AFR_AF=0.2224;AMR_AF=0.5014;AN=5008;CIEND=0,546;CIPOS=-472,0;CS=DEL_union;EAS_AF=0.5357;END=74932945;EUR_AF=0.5417;NS=2504;SAS_AF=0.5695;SVTYPE=DEL	GT	1|1
6	77097464	BI_GS_DEL1_B5_P1144_101	A	<CN0>	100	PASS	AC=2081;AF=0.415535;AFR_AF=0.0961;AMR_AF=0.5476;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.4137;END=77102643;EUR_AF=0.6203;MC=UW_VH_569,YL_CN_ESN_1550,UW_VH_19004,EM_DL_DEL85244,UW_VH_4351;NS=2504;SAS_AF=0.545;SVTYPE=DEL	GT	0|1
6	77437459	DUP_gs_CNV_6_77437459_77453275	T	<CN0>,<CN2>	.	PASS	AC=714,2;AF=0.142572,0.00039936;AFR_AF=0.09,0;AMR_AF=0.1556,0;AN=5008;CS=DUP_gs;EAS_AF=0.0169,0.002;END=77453275;EUR_AF=0.2495,0;MC=EM_DL_DEL85254,UW_VH_4433,UW_VH_11206,UW_VH_2970,UW_VH_4989,SI_BD_6792,YL_CN_ESN_1551;NS=2504;SAS_AF=0.2239,0;SITEPOST=1;SVTYPE=CNV	GT	1|0
6	77449470	BI_GS_DEL1_B4_P1144_83	A	<CN0>	100	PASS	AC=783;AF=0.15635;AFR_AF=0.1445;AMR_AF=0.1599;AN=5008;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0159;END=77452760;EUR_AF=0.2455;MC=SI_BD_6793;NS=2504;SAS_AF=0.2229;SVTYPE=DEL	GT	1|0
6	77980649	L1_umary_LINE1_1336	T	<INS:ME:LINE1>	.	.	AC=2016;AF=0.402556;AFR_AF=0.2035;AMR_AF=0.4207;AN=5008;CS=L1_umary;EAS_AF=0.4117;EUR_AF=0.5646;MEINFO=LINE1,5228,6019,-;NS=2504;SAS_AF=0.4826;SITEPOST=1;SVLEN=791;SVTYPE=LINE1;TSD=null	GT	1|0
6	79723801	ALU_umary_ALU_5314	T	<INS:ME:ALU>	.	.	AC=378;AF=0.0754792;AFR_AF=0.0681;AMR_AF=0.0663;AN=5008;CS=ALU_umary;EAS_AF=0.0933;EUR_AF=0.0785;MEINFO=AluYa3_4,98,281,-;NS=2504;SAS_AF=0.0706;SITEPOST=1;SVLEN=183;SVTYPE=ALU;TSD=TACAAACCTTATTTCTT	GT	0|1
6	80086769	ALU_umary_ALU_5318	T	<INS:ME:ALU>	.	.	AC=166;AF=0.033147;AFR_AF=0.0136;AMR_AF=0.0187;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0636;MEINFO=AluUndef,1,275,-;NS=2504;SAS_AF=0.0716;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAAGTCAAAGTTTTATTCTTTCTT	GT	1|0
6	80609906	DEL_pindel_19532	AAGGAAATGTCTTGTTTCCAAAATTATACCACTGTCCCCCAAATAGTTATATGAATTTCAGTTACAATTAGG	A	.	PASS	AC=1486;AF=0.296725;AFR_AF=0.2065;AMR_AF=0.3732;AN=5008;CS=DEL_pindel;EAS_AF=0.4603;END=80609977;EUR_AF=0.2833;NS=2504;SAS_AF=0.2096;SITEPOST=0.9994;SVTYPE=DEL	GT	0|1
6	81283720	BI_GS_DEL1_B4_P1148_45	C	<CN0>	100	PASS	AC=424;AF=0.0846645;AFR_AF=0.0008;AMR_AF=0.0994;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1815;END=81293577;EUR_AF=0.0547;MC=EM_DL_DEL85400,UW_VH_2682,YL_CN_CLM_1289;NS=2504;SAS_AF=0.1186;SVTYPE=DEL	GT	1|0
6	83094623	DEL_pindel_19587	AATCCTGTAACTAATAACAGATGAGATGTTCATTATGTAGAGAGTGTTTTTTT	A	.	PASS	AC=1223;AF=0.244209;AFR_AF=0.2254;AMR_AF=0.2363;AN=5008;CS=DEL_pindel;EAS_AF=0.3145;END=83094675;EUR_AF=0.1849;NS=2504;SAS_AF=0.2638;SITEPOST=0.99645;SVTYPE=DEL	GT	0|1
6	86026352	DEL_pindel_19647	TAAGGGTGGGTCCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2910;AF=0.58107;AFR_AF=0.5386;AMR_AF=0.6254;AN=5008;CS=DEL_pindel;EAS_AF=0.5179;END=86026667;EUR_AF=0.5845;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.6687;SITEPOST=0.9965;SVTYPE=DEL_ALU	GT	1|1
6	86144298	DEL_pindel_19649	TGAAATTGCAGGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA	T	.	PASS	AC=708;AF=0.141374;AFR_AF=0.2413;AMR_AF=0.0865;AN=5008;CS=DEL_pindel;EAS_AF=0.0536;END=86144632;EUR_AF=0.1332;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.1442;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	1|0
6	87678642	ALU_umary_ALU_5348	T	<INS:ME:ALU>	.	.	AC=168;AF=0.0335463;AFR_AF=0.0242;AMR_AF=0.036;AN=5008;CS=ALU_umary;EAS_AF=0.0179;EUR_AF=0.0666;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.0266;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TCACTTATGATTTTTT	GT	1|0
6	88118173	DEL_pindel_19699	TGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGC	T	.	PASS	AC=1224;AF=0.244409;AFR_AF=0.326;AMR_AF=0.232;AN=5008;CS=DEL_pindel;EAS_AF=0.2024;END=88118306;EUR_AF=0.2535;NS=2504;SAS_AF=0.1769;SITEPOST=0.9984;SVTYPE=DEL	GT	0|1
6	88651308	DEL_pindel_19710	TTTTTTGGCACTGCCTTGAGTAGATGTAATCTCTACCCTTTGCTAGAAAACAGAAATGGAAATAATATGAAGA	T	.	PASS	AC=295;AF=0.0589058;AFR_AF=0.0635;AMR_AF=0.062;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=88651380;EUR_AF=0.0934;NS=2504;SAS_AF=0.0746;SITEPOST=1;SVTYPE=DEL	GT	1|0
6	88698077	ALU_umary_ALU_5356	T	<INS:ME:ALU>	.	.	AC=636;AF=0.126997;AFR_AF=0.2708;AMR_AF=0.1052;AN=5008;CS=ALU_umary;EAS_AF=0.0119;EUR_AF=0.1312;MEINFO=AluY,2,276,-;NS=2504;SAS_AF=0.0624;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=GGGCCCCTTTCTT	GT	0|1
6	89921713	BI_GS_DEL1_B4_P1156_175	G	<CN0>	100	PASS	AC=2438;AF=0.486821;AFR_AF=0.4236;AMR_AF=0.513;AN=5008;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.3145;END=89922144;EUR_AF=0.5765;MC=UW_VH_575,DEL_pindel_19745;NS=2504;SAS_AF=0.6391;SVTYPE=DEL	GT	1|1
6	91125879	ALU_umary_ALU_5366	T	<INS:ME:ALU>	.	.	AC=1296;AF=0.258786;AFR_AF=0.1051;AMR_AF=0.3487;AN=5008;CS=ALU_umary;EAS_AF=0.3631;EUR_AF=0.2992;MEINFO=AluYb8,1,278,-;NS=2504;SAS_AF=0.2536;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=CTAAAATATTATTGTGTAGTTATTCTT	GT	0|1
6	91237575	DEL_pindel_19770	TTCATAAGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2804;AF=0.559904;AFR_AF=0.6225;AMR_AF=0.4986;AN=5008;CS=DEL_pindel;EAS_AF=0.4534;END=91237896;EUR_AF=0.5964;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.591;SITEPOST=0.9931;SVTYPE=DEL_ALU	GT	1|1
6	94397505	DEL_pindel_19826	AAAAAAATAATTATGCTCAACTAGGATTTATCCCAGAGACGCAAGAACAGTTCAACATATGC	A	.	PASS	AC=1485;AF=0.296526;AFR_AF=0.1415;AMR_AF=0.2896;AN=5008;CS=DEL_pindel;EAS_AF=0.3601;END=94397566;EUR_AF=0.4125;NS=2504;SAS_AF=0.3262;SITEPOST=0.9997;SVTYPE=DEL	GT	0|1
6	94930783	ALU_umary_ALU_5384	T	<INS:ME:ALU>	.	.	AC=1116;AF=0.222843;AFR_AF=0.0756;AMR_AF=0.3847;AN=5008;CS=ALU_umary;EAS_AF=0.3056;EUR_AF=0.2604;MEINFO=AluYb8,1,276,-;NS=2504;SAS_AF=0.183;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=TCCAACTCTCTTTT	GT	1|0
6	95193325	BI_GS_DEL1_B2_P1162_129	A	<CN0>	100	PASS	AC=1928;AF=0.384984;AFR_AF=0.0809;AMR_AF=0.7061;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3522;END=95194337;EUR_AF=0.5686;MC=UW_VH_1467;NS=2504;SAS_AF=0.4131;SVTYPE=DEL	GT	1|0
6	95335622	DEL_pindel_19843	ATATTATTATTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATAATAT	A	.	PASS	AC=3107;AF=0.620407;AFR_AF=0.587;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.5764;END=95335927;EUR_AF=0.7008;MEINFO=AluY,24,281,-;NS=2504;SAS_AF=0.545;SITEPOST=0.9719;SVTYPE=DEL_ALU	GT	1|1
6	96009421	ALU_umary_ALU_5389	T	<INS:ME:ALU>	.	.	AC=193;AF=0.0385383;AFR_AF=0.0091;AMR_AF=0.049;AN=5008;CS=ALU_umary;EAS_AF=0.0466;EUR_AF=0.0586;MEINFO=AluYa5,1,277,-;NS=2504;SAS_AF=0.0419;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=ATGTCTACTTCTTTCT	GT	0|1
6	97017683	ALU_umary_ALU_5395	T	<INS:ME:ALU>	.	.	AC=554;AF=0.110623;AFR_AF=0.0787;AMR_AF=0.1427;AN=5008;CS=ALU_umary;EAS_AF=0.0337;EUR_AF=0.175;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.1442;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GTGAGTTTCTTTT	GT	1|0
6	98251340	ALU_umary_ALU_5402	T	<INS:ME:ALU>	.	.	AC=1492;AF=0.297923;AFR_AF=0.1846;AMR_AF=0.3516;AN=5008;CS=ALU_umary;EAS_AF=0.3313;EUR_AF=0.4304;MEINFO=AluYa5,5,281,-;NS=2504;SAS_AF=0.2423;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=TAGACCATTTCT	GT	1|1
6	100034558	SI_BD_6915	T	<CN0>	100	PASS	AC=4663;AF=0.93111;AFR_AF=0.9856;AMR_AF=0.8545;AN=5008;CIEND=-52,320;CIPOS=-320,50;CS=DEL_union;EAS_AF=0.9931;END=100035368;EUR_AF=0.8091;MC=UW_VH_12127,UW_VH_578;NS=2504;SAS_AF=0.9734;SVTYPE=DEL	GT	1|0
6	104183184	DEL_pindel_19946	GAAAGAAATTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	.	PASS	AC=2558;AF=0.510783;AFR_AF=0.4675;AMR_AF=0.4813;AN=5008;CS=DEL_pindel;EAS_AF=0.5367;END=104183509;EUR_AF=0.4732;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6022;SITEPOST=0.9874;SVTYPE=DEL_ALU	GT	1|0
6	105567837	DEL_pindel_19974	TAAAAACATGGATTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGAAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3602;AF=0.719249;AFR_AF=0.6725;AMR_AF=0.732;AN=5008;CS=DEL_pindel;EAS_AF=0.7272;END=105568172;EUR_AF=0.7535;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7301;SITEPOST=0.952;SVTYPE=DEL_ALU	GT	1|1
6	106983622	DEL_pindel_19993	AAGCCACTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTG	A	.	PASS	AC=3875;AF=0.773762;AFR_AF=0.7685;AMR_AF=0.7651;AN=5008;CS=DEL_pindel;EAS_AF=0.7599;END=106983941;EUR_AF=0.7664;MEINFO=AluYb6_2,18,281,-;NS=2504;SAS_AF=0.8088;SITEPOST=0.9748;SVTYPE=DEL_ALU	GT	1|1
6	108266112	DEL_pindel_20002	CAAAAATCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCTAGAACCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	C	.	PASS	AC=3909;AF=0.780551;AFR_AF=0.7912;AMR_AF=0.768;AN=5008;CS=DEL_pindel;EAS_AF=0.754;END=108266415;EUR_AF=0.7843;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7986;SITEPOST=0.95395;SVTYPE=DEL_ALU	GT	1|0
6	110102982	ALU_umary_ALU_5467	T	<INS:ME:ALU>	.	.	AC=1350;AF=0.269569;AFR_AF=0.0915;AMR_AF=0.3501;AN=5008;CS=ALU_umary;EAS_AF=0.2659;EUR_AF=0.4851;MEINFO=AluYb8,22,281,-;NS=2504;SAS_AF=0.2352;SITEPOST=1;SVLEN=259;SVTYPE=ALU;TSD=AGATTT	GT	1|1
6	114223973	UW_VH_13135	A	<CN0>	100	PASS	AC=1783;AF=0.35603;AFR_AF=0.3374;AMR_AF=0.3156;AN=5008;CIEND=0,371;CIPOS=-461,0;CS=DEL_union;EAS_AF=0.4504;END=114225052;EUR_AF=0.3549;MC=EM_DL_DEL10956041,UW_VH_4820,SI_BD_6993,UW_VH_14508;NS=2504;SAS_AF=0.3139;SVTYPE=DEL	GT	0|1
6	116844156	ALU_umary_ALU_5502	G	<INS:ME:ALU>	.	.	AC=905;AF=0.180711;AFR_AF=0.1203;AMR_AF=0.1138;AN=5008;CS=ALU_umary;EAS_AF=0.2847;EUR_AF=0.1461;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2382;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAATGTGGATTGCTG	GT	1|0
6	118626162	ALU_umary_ALU_5509	T	<INS:ME:ALU>	.	.	AC=1826;AF=0.364617;AFR_AF=0.4985;AMR_AF=0.2536;AN=5008;CS=ALU_umary;EAS_AF=0.1964;EUR_AF=0.4185;MEINFO=AluUndef,22,280,-;NS=2504;SAS_AF=0.3804;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=AGTCAAAGATCTTT	GT	1|1
6	120380266	ALU_umary_ALU_5522	T	<INS:ME:ALU>	.	.	AC=862;AF=0.172125;AFR_AF=0.0295;AMR_AF=0.2781;AN=5008;CS=ALU_umary;EAS_AF=0.1538;EUR_AF=0.2833;MEINFO=AluYc1,1,280,-;NS=2504;SAS_AF=0.1943;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CCCTGCTCTTGTT	GT	1|1
6	121319292	DEL_pindel_20215	ACCTTTCCCATTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTACACAGGCGCCCGCTACCACGCCCGGCTAATGTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2522;AF=0.503594;AFR_AF=0.2784;AMR_AF=0.5764;AN=5008;CS=DEL_pindel;EAS_AF=0.5813;END=121319616;EUR_AF=0.6372;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.5389;SITEPOST=0.99095;SVTYPE=DEL_ALU	GT	0|1
6	122301643	DEL_pindel_20244	GCAGTATGTCCATTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACACCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGC	G	.	PASS	AC=3095;AF=0.618011;AFR_AF=0.5333;AMR_AF=0.647;AN=5008;CS=DEL_pindel;EAS_AF=0.6349;END=122301962;EUR_AF=0.6501;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.6616;SITEPOST=0.9789;SVTYPE=DEL_ALU	GT	1|0
6	123515058	DEL_pindel_20267	TAAAAAACATCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3322;AF=0.663339;AFR_AF=0.7784;AMR_AF=0.6945;AN=5008;CS=DEL_pindel;EAS_AF=0.4802;END=123515373;EUR_AF=0.7336;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.6022;SITEPOST=0.98955;SVTYPE=DEL_ALU	GT	1|1
6	124498906	DEL_pindel_20294	TTCTGTTCATCCATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAA	T	.	PASS	AC=3525;AF=0.703874;AFR_AF=0.6732;AMR_AF=0.7233;AN=5008;CS=DEL_pindel;EAS_AF=0.7242;END=124499229;EUR_AF=0.7068;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7076;SITEPOST=0.957;SVTYPE=DEL_ALU	GT	0|1
6	125421421	ALU_umary_ALU_5557	A	<INS:ME:ALU>	.	.	AC=1311;AF=0.261781;AFR_AF=0.2542;AMR_AF=0.2262;AN=5008;CS=ALU_umary;EAS_AF=0.1994;EUR_AF=0.3479;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.273;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAAA	GT	0|1
6	126468009	UW_VH_589	A	<CN0>	100	PASS	AC=1999;AF=0.399161;AFR_AF=0.5696;AMR_AF=0.3545;AN=5008;CIEND=0,429;CIPOS=-491,0;CS=DEL_union;EAS_AF=0.1081;END=126468247;EUR_AF=0.505;MC=DEL_pindel_20332,BI_GS_DEL1_B2_P1193_357;NS=2504;SAS_AF=0.3916;SVTYPE=DEL	GT	1|1
6	129737070	DEL_pindel_20371	TGAAATTATACACTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2078;AF=0.414936;AFR_AF=0.4803;AMR_AF=0.3602;AN=5008;CS=DEL_pindel;EAS_AF=0.4216;END=129737384;EUR_AF=0.3738;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4008;SITEPOST=0.9968;SVTYPE=DEL_ALU	GT	1|0
6	131113279	ALU_umary_ALU_5589	C	<INS:ME:ALU>	.	.	AC=1035;AF=0.206669;AFR_AF=0.1157;AMR_AF=0.2435;AN=5008;CS=ALU_umary;EAS_AF=0.1419;EUR_AF=0.3012;MEINFO=AluYb8,3,279,+;NS=2504;SAS_AF=0.273;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAAATCTCAAGGCC	GT	0|1
6	131273499	ALU_umary_ALU_5591	G	<INS:ME:ALU>	.	.	AC=501;AF=0.10004;AFR_AF=0.0363;AMR_AF=0.1239;AN=5008;CS=ALU_umary;EAS_AF=0.0248;EUR_AF=0.1988;MEINFO=AluUndef,1,261,+;NS=2504;SAS_AF=0.1452;SITEPOST=1;SVLEN=260;SVTYPE=ALU;TSD=AAAATGTTCACTAAAG	GT	0|1
6	131418012	BI_GS_DEL1_B1_P1198_405	C	<CN0>	100	PASS	AC=814;AF=0.16254;AFR_AF=0.0658;AMR_AF=0.2176;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0298;END=131418980;EUR_AF=0.2853;MC=EM_DL_DEL10962433;NS=2504;SAS_AF=0.2648;SVTYPE=DEL	GT	1|0
6	132697628	DEL_pindel_20434	TAACTACAGCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2293;AF=0.457867;AFR_AF=0.7201;AMR_AF=0.2939;AN=5008;CS=DEL_pindel;EAS_AF=0.5843;END=132697951;EUR_AF=0.1998;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.3548;SITEPOST=0.9947;SVTYPE=DEL_ALU	GT	1|0
6	132707465	UW_VH_4535	C	<CN0>	100	PASS	AC=160;AF=0.0319489;AFR_AF=0;AMR_AF=0.0375;AN=5008;CIEND=0,239;CIPOS=-429,0;CS=DEL_union;EAS_AF=0.002;END=132712439;EUR_AF=0.0527;MC=EM_DL_DEL86970,BI_GS_DEL1_B4_P1199_148,SI_BD_7074,YL_CN_GBR_1473;NS=2504;SAS_AF=0.0808;SVTYPE=DEL	GT	1|0
6	133371487	DEL_pindel_20447	TGCCAATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCCATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2176;AF=0.434505;AFR_AF=0.6172;AMR_AF=0.402;AN=5008;CS=DEL_pindel;EAS_AF=0.2827;END=133371831;EUR_AF=0.4294;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.3722;SITEPOST=0.99895;SVTYPE=DEL_ALU	GT	0|1
6	134268952	BI_GS_DEL1_B4_P1201_57	G	<CN0>	100	PASS	AC=1338;AF=0.267173;AFR_AF=0.1566;AMR_AF=0.3357;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1558;END=134269719;EUR_AF=0.5169;MC=DEL_pindel_20466;NS=2504;SAS_AF=0.226;SVTYPE=DEL	GT	0|1
6	137313691	BI_GS_DEL1_B1_P1204_268	A	<CN0>	100	PASS	AC=4207;AF=0.840056;AFR_AF=0.441;AMR_AF=0.9323;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.999;END=137314188;EUR_AF=0.9881;MC=DEL_pindel_20506;NS=2504;SAS_AF=0.998;SVTYPE=DEL	GT	1|1
6	141325707	DEL_pindel_20585	TAAAATCCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=2464;AF=0.492013;AFR_AF=0.6059;AMR_AF=0.513;AN=5008;CS=DEL_pindel;EAS_AF=0.3433;END=141326033;EUR_AF=0.5596;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.407;SITEPOST=0.9941;SVTYPE=DEL_ALU	GT	1|1
6	141548586	BI_GS_DEL1_B4_P1208_126	C	<CN0>	100	PASS	AC=1339;AF=0.267372;AFR_AF=0.1846;AMR_AF=0.2954;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.255;END=141550030;EUR_AF=0.3887;MC=YL_CN_CLM_1314,YL_CN_CHB_1556,YL_CN_JPT_1674,SI_BD_7124,YL_CN_PUR_1852,UW_VH_599;NS=2504;SAS_AF=0.2474;SVTYPE=DEL	GT	1|0
6	145818662	DEL_pindel_20692	GGATCCACTTAAGGAAGTGATCTAGCCATGCTTTCCTAGAGTAGCTGTGCTGTGCTGTTGTATTGCTTCCGTCTGTGGTAAGCCTGGGCTCTCCAAAGC	G	.	PASS	AC=2306;AF=0.460463;AFR_AF=0.4289;AMR_AF=0.3674;AN=5008;CS=DEL_pindel;EAS_AF=0.4187;END=145818760;EUR_AF=0.4612;NS=2504;SAS_AF=0.6115;SITEPOST=1;SVTYPE=DEL	GT	1|0
6	148506314	DEL_pindel_20752	CTACAGGCATGCACCAACATGCCCAGCTAAGTTTTTTATGTTTTAGTAGAGATGGGGTTTCACCATATTGGCCAGGCTGGTCTCGAACTCCTGTCCTCGTAATCTGCCCATCTCAGCCTCCCAAATTGCTGGGAT	C	.	PASS	AC=1258;AF=0.251198;AFR_AF=0.1551;AMR_AF=0.2824;AN=5008;CS=DEL_pindel;EAS_AF=0.3165;END=148506448;EUR_AF=0.2793;NS=2504;SAS_AF=0.2628;SITEPOST=0.9985;SVTYPE=DEL	GT	0|1
6	149632778	DEL_pindel_20781	TACCACTGTCAATGCTAGTGTTAGTAACTGGTTTATAATTAGTAAATTTTGTATGCCCCAAATTCCTATCACATTTGTGCTTTACACCCATGTTATCAATATGCCATGTTCTACATTTAGCAATATTTTCTAAGATCTTATATTGGAATCTAGTCTCAAAAATGGAA	T	.	PASS	AC=2110;AF=0.421326;AFR_AF=0.3464;AMR_AF=0.415;AN=5008;CS=DEL_pindel;EAS_AF=0.4196;END=149632944;EUR_AF=0.493;NS=2504;SAS_AF=0.455;SITEPOST=1;SVTYPE=DEL	GT	0|1
6	151485895	UW_VH_11750	G	<CN0>	100	PASS	AC=1715;AF=0.342452;AFR_AF=0.0703;AMR_AF=0.389;AN=5008;CIEND=0,524;CIPOS=-441,0;CS=DEL_union;EAS_AF=0.5109;END=151486930;EUR_AF=0.4493;MC=UW_VH_20341,UW_VH_3611,SI_BD_7179,BI_GS_DEL1_B1_P1218_414,UW_VH_12285,UW_VH_600;NS=2504;SAS_AF=0.3937;SVTYPE=DEL	GT	0|1
6	153408248	DEL_pindel_20877	TCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACGCTTGTAATCCCAGCTA	T	.	PASS	AC=1959;AF=0.391174;AFR_AF=0.3328;AMR_AF=0.5144;AN=5008;CS=DEL_pindel;EAS_AF=0.2738;END=153408307;EUR_AF=0.5308;NS=2504;SAS_AF=0.3599;SITEPOST=0.9991;SVTYPE=DEL	GT	0|1
6	153429856	SVA_umary_SVA_315	C	<INS:ME:SVA>	.	.	AC=1648;AF=0.329073;AFR_AF=0.2602;AMR_AF=0.1931;AN=5008;CS=SVA_umary;EAS_AF=0.5347;EUR_AF=0.2525;MEINFO=SVA,1245,1627,+;NS=2504;SAS_AF=0.3855;SITEPOST=1;SVLEN=382;SVTYPE=SVA;TSD=AGAAAATTCCCCTACATTCC	GT	1|0
6	153633385	ALU_umary_ALU_5701	T	<INS:ME:ALU>	.	.	AC=1468;AF=0.293131;AFR_AF=0.351;AMR_AF=0.4179;AN=5008;CS=ALU_umary;EAS_AF=0.1687;EUR_AF=0.2932;MEINFO=AluUndef,8,281,-;NS=2504;SAS_AF=0.2546;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=TTTTTCTCTGCCTTCT	GT	0|1
6	154446915	DEL_pindel_20902	AGGCTAGACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTACAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGATCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	A	.	PASS	AC=3553;AF=0.709465;AFR_AF=0.5734;AMR_AF=0.7594;AN=5008;CS=DEL_pindel;EAS_AF=0.755;END=154447237;EUR_AF=0.7465;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.773;SITEPOST=0.9812;SVTYPE=DEL_ALU	GT	1|0
6	154463239	DEL_pindel_20903	TCCCCTCCAACCTCTGGCCGTCTCTGCTGGGCTTGTGTTACAGTGGGTAGCTCATCAGGCATGAGCAGGGCAGGACAGGACTCCCCACCCCA	T	.	PASS	AC=1797;AF=0.358826;AFR_AF=0.3593;AMR_AF=0.4625;AN=5008;CS=DEL_pindel;EAS_AF=0.2966;END=154463330;EUR_AF=0.4125;NS=2504;SAS_AF=0.2935;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
6	154686517	DEL_pindel_20913	TAAGAAAATCATATCCCAGCACTTTGGAAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGATCGAGACTCCGTCTCAAAAAAAAAAA	T	.	PASS	AC=1551;AF=0.309704;AFR_AF=0.295;AMR_AF=0.2622;AN=5008;CS=DEL_pindel;EAS_AF=0.3135;END=154686793;EUR_AF=0.3091;MEINFO=AluYc2,28,281,+;NS=2504;SAS_AF=0.3599;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|0
6	154882352	DEL_pindel_20921	CAGACTCAAACTGAAATATTGGCTCTTCCTCGGTCCCCAGCCTGCCAGTTTTGGACTGGAACTATACCATTTGCTCTCCTGGTTCTCAAGCCTTCAGACTCAGACTGGAGTTAAATTGT	C	.	PASS	AC=316;AF=0.063099;AFR_AF=0.1377;AMR_AF=0.0548;AN=5008;CS=DEL_pindel;EAS_AF=0.0397;END=154882470;EUR_AF=0.0328;NS=2504;SAS_AF=0.0235;SITEPOST=0.9994;SVTYPE=DEL	GT	0|1
6	158548266	DEL_pindel_21003	TGAAAAATGAACATATCTCGGCCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGTCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATTGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3485;AF=0.695887;AFR_AF=0.6687;AMR_AF=0.7104;AN=5008;CS=DEL_pindel;EAS_AF=0.7431;END=158549066;EUR_AF=0.66;MEINFO=SVA_F,1030,1627,+;NS=2504;SAS_AF=0.7106;SITEPOST=0.978;SVTYPE=DEL_SVA	GT	1|1
6	158876076	DEL_pindel_21015	GCAAATTTAACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAATGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=2397;AF=0.478634;AFR_AF=0.5764;AMR_AF=0.4294;AN=5008;CS=DEL_pindel;EAS_AF=0.3542;END=158876404;EUR_AF=0.4771;MEINFO=AluYb3a1,2,281,-;NS=2504;SAS_AF=0.5112;SITEPOST=0.9977;SVTYPE=DEL_ALU	GT	1|1
6	159204431	ALU_umary_ALU_5729	T	<INS:ME:ALU>	.	.	AC=1651;AF=0.329673;AFR_AF=0.3071;AMR_AF=0.2594;AN=5008;CS=ALU_umary;EAS_AF=0.1746;EUR_AF=0.4851;MEINFO=AluYb6_2,2,276,+;NS=2504;SAS_AF=0.41;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAAAAGTTTCCT	GT	1|0
6	160086252	UW_VH_1786	G	<CN0>	100	PASS	AC=1317;AF=0.262979;AFR_AF=0.143;AMR_AF=0.2406;AN=5008;CIEND=0,492;CIPOS=-487,0;CS=DEL_union;EAS_AF=0.4177;END=160088699;EUR_AF=0.2654;MC=YL_CN_CEU_1948,YL_CN_GBR_1489,YL_CN_JPT_1693,BI_GS_DEL1_B1_P1227_64,YL_CN_FIN_1458,YL_CN_GWD_2159,EM_DL_DEL87571;NS=2504;SAS_AF=0.2791;SVTYPE=DEL	GT	1|0
6	161274256	DEL_pindel_21063	ATCGTCTTTTCTCTGGGTTCACTGTTGTATATTCTCTGGGTGCACCGTAGTCTTTTCTCTGGGTTCACTCTCGTCATCTCTCTGGGTTCACTGTCGTATGTTCTCTGGGTTCACCATTGTTGATTCTCTGGGTCCCTTTTTCTCTGGATGCGCTGTCATCTTTTCTCTGGGTTCACCGTCGTCTTTTCTCTGGGCTCACTGTCATCTTTTCTCTGGGTTCACTGTCATATTTTCTCTGGGTTCACCATGATCTTTTCTCTGGGTTCACTGTTCTGTGGGTTCACTGTCGTCTTATTTCTGAATTCGCTGTCGCCTTTTCTCTGGGTTCACCATAGTCTTTTCTCTGGGTTCACTGTTGTATATTCTCTGGGTGCACCG	A	.	PASS	AC=1896;AF=0.378594;AFR_AF=0.3593;AMR_AF=0.3876;AN=5008;CS=DEL_pindel;EAS_AF=0.4583;END=161274633;EUR_AF=0.2962;NS=2504;SAS_AF=0.4008;SITEPOST=1;SVTYPE=DEL	GT	0|1
6	161684136	DEL_pindel_21075	CGGTGGGCGGGGTGTTTCTCACACCTGCCTGCCCCACCCCACCCCACCACCAAGATTCCCAGCCACCTTGGATGCTTAAGGAAGGTGCATTTCCCCCGGTGAG	C	.	PASS	AC=3038;AF=0.606629;AFR_AF=0.8563;AMR_AF=0.6153;AN=5008;CS=DEL_pindel;EAS_AF=0.5337;END=161684238;EUR_AF=0.5129;NS=2504;SAS_AF=0.4346;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
6	162583796	UW_VH_4804	C	<CN0>	100	PASS	AC=423;AF=0.0844649;AFR_AF=0.1747;AMR_AF=0.0764;AN=5008;CIEND=0,435;CIPOS=-402,0;CS=DEL_union;EAS_AF=0.0238;END=162586803;EUR_AF=0.0706;MC=YL_CN_TSI_1465,YL_CN_YRI_2012,UW_VH_3143,YL_CN_GWD_2169,BI_GS_DEL1_B2_P1229_381,UW_VH_12103;NS=2504;SAS_AF=0.045;SVTYPE=DEL	GT	1|0
6	162852220	DEL_pindel_21121	AAAGAAAAAAATGGACTTGGTTGCCTTGTGGAGAATGGATAGTAGTTGAGCCTTGTGGTGAATGGATAGTAATT	A	.	PASS	AC=639;AF=0.127596;AFR_AF=0.2239;AMR_AF=0.0562;AN=5008;CS=DEL_pindel;EAS_AF=0.0962;END=162852293;EUR_AF=0.0577;NS=2504;SAS_AF=0.1524;SITEPOST=0.999;SVTYPE=DEL	GT	1|0
6	163814230	ALU_umary_ALU_5746	C	<INS:ME:ALU>	.	.	AC=2491;AF=0.497404;AFR_AF=0.3911;AMR_AF=0.5216;AN=5008;CS=ALU_umary;EAS_AF=0.6498;EUR_AF=0.4463;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.5194;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGATGAGGTCTC	GT	0|1
6	165186931	ALU_umary_ALU_5750	C	<INS:ME:ALU>	.	.	AC=1291;AF=0.257788;AFR_AF=0.2352;AMR_AF=0.3127;AN=5008;CS=ALU_umary;EAS_AF=0.2629;EUR_AF=0.167;MEINFO=AluYc1,13,280,-;NS=2504;SAS_AF=0.3374;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=TC	GT	1|0
6	167928592	DEL_pindel_21251	TGTCATCACTCGTCAACACTATCACAGTCATTATCACATCATCACCATCATCGTCATCAGCATCTTGATCACCACCATCATCAGAATGGGAACAAAAAAAGCCCATCATC	T	.	PASS	AC=3268;AF=0.652556;AFR_AF=0.6346;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.6736;END=167928701;EUR_AF=0.663;NS=2504;SAS_AF=0.6339;SITEPOST=0.9562;SVTYPE=DEL	GT	1|1
6	170038118	DEL_pindel_21305	TAAGAAACTAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1321;AF=0.263778;AFR_AF=0.4864;AMR_AF=0.1628;AN=5008;CS=DEL_pindel;EAS_AF=0.1409;END=170038445;EUR_AF=0.2256;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2004;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|0
6	170206128	DEL_pindel_21312	ACACAGAGCTCTTCACATACGCAGAGCTCTCCACACCACAGAATTCTCCATAGACACAGAACTCGCTCTCCACACAACAGAGCTCTTCACACCACACAGCTCTCAGTGTACACAAAGTTCTTCACACCACAGAACTCTACTTGCCACAGAGTGCTCCATAGACACAGGGCTCTCCACACCACAGAGCTCTACACACTAAAGAATTCTCCACAGACAGAGCGCTCTACACTCCACAGAGCTCTCCAGAGACACAGAGCTCTCCACACCACAGAGACTTCCATAT	A	.	PASS	AC=1569;AF=0.313299;AFR_AF=0.3434;AMR_AF=0.3213;AN=5008;CS=DEL_pindel;EAS_AF=0.4633;END=170206410;EUR_AF=0.1889;NS=2504;SAS_AF=0.2403;SITEPOST=0.9849;SVTYPE=DEL	GT	1|0
6	170465430	DEL_pindel_21324	CCCAACAAGCCTGCTGCCTGCCACCCCTCCACTGCCTACAGTGTAGACAGAGGCTCACCTCCTG	C	.	PASS	AC=2357;AF=0.470647;AFR_AF=0.4304;AMR_AF=0.4798;AN=5008;CS=DEL_pindel;EAS_AF=0.4782;END=170465493;EUR_AF=0.4801;NS=2504;SAS_AF=0.501;SITEPOST=0.963;SVTYPE=DEL	GT	1|0
6	170500768	ALU_umary_ALU_5771	C	<INS:ME:ALU>	.	.	AC=1340;AF=0.267572;AFR_AF=0.1528;AMR_AF=0.2651;AN=5008;CS=ALU_umary;EAS_AF=0.3482;EUR_AF=0.3161;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.2914;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CAACAATAAAATATTC	GT	1|0
7	904330	DEL_pindel_21372	ATCTCGGCTCGCCGCAACCTCTGCCTCCCGGCTTCAAGCAATTCTCCTGCCTCAGCC	A	.	PASS	AC=3173;AF=0.633586;AFR_AF=0.5719;AMR_AF=0.6628;AN=5008;CS=DEL_pindel;EAS_AF=0.6429;END=904386;EUR_AF=0.6044;NS=2504;SAS_AF=0.7168;SITEPOST=0.999;SVTYPE=DEL	GT	0|1
7	1185070	BI_GS_DEL1_B1_P1240_104	T	<CN0>	100	PASS	AC=3662;AF=0.73123;AFR_AF=0.7943;AMR_AF=0.7032;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6349;END=1187665;EUR_AF=0.7425;NS=2504;SAS_AF=0.7536;SVTYPE=DEL	GT	1|1
7	1898671	DEL_pindel_21436	TGGAGCAGACCTCCACACCAAACCCCATACGCAGGAGGGCCAGGCACCTGAGAGAGGCCTGCAGAGAC	T	.	PASS	AC=1082;AF=0.216054;AFR_AF=0.025;AMR_AF=0.2997;AN=5008;CS=DEL_pindel;EAS_AF=0.3234;END=1898738;EUR_AF=0.2545;NS=2504;SAS_AF=0.2648;SITEPOST=0.996;SVTYPE=DEL	GT	1|0
7	4158162	UW_VH_2937	A	<CN0>	100	PASS	AC=379;AF=0.0756789;AFR_AF=0.0545;AMR_AF=0.0677;AN=5008;CIEND=0,378;CIPOS=-334,0;CS=DEL_union;EAS_AF=0.001;END=4160313;EUR_AF=0.1223;MC=YL_CN_GBR_1532,YL_CN_TSI_1494,YL_CN_ITU_1578,BI_GS_DEL1_B1_P1243_137;NS=2504;SAS_AF=0.1391;SVTYPE=DEL	GT	1|0
7	7583520	UW_VH_6814	C	<CN0>	100	PASS	AC=2746;AF=0.548323;AFR_AF=0.1611;AMR_AF=0.7046;AN=5008;CIEND=0,279;CIPOS=-262,0;CS=DEL_union;EAS_AF=0.7083;END=7584968;EUR_AF=0.6859;MC=BI_GS_DEL1_B5_P1246_728;NS=2504;SAS_AF=0.6544;SVTYPE=DEL	GT	1|1
7	8463553	BI_GS_DEL1_B3_P1247_22	A	<CN0>	100	PASS	AC=108;AF=0.0215655;AFR_AF=0.0023;AMR_AF=0.0331;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=8465548;EUR_AF=0.0646;MC=EM_DL_DEL88117,UW_VH_2221,YL_CN_CLM_1374;NS=2504;SAS_AF=0.0174;SVTYPE=DEL	GT	0|1
7	8698628	BI_GS_DEL1_B3_P1247_39	T	<CN0>	100	PASS	AC=3230;AF=0.644968;AFR_AF=0.4327;AMR_AF=0.7104;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7401;END=8698847;EUR_AF=0.7028;MC=DEL_pindel_21642,UW_VH_609;NS=2504;SAS_AF=0.728;SVTYPE=DEL	GT	1|1
7	10504231	YL_CN_ASW_1703	G	<CN0>	100	PASS	AC=2977;AF=0.594449;AFR_AF=0.8389;AMR_AF=0.7133;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4633;END=10506240;EUR_AF=0.5795;MC=YL_CN_CLM_1376;NS=2504;SAS_AF=0.3303;SVTYPE=DEL	GT	1|0
7	10834757	DEL_pindel_21688	ATATATACGTATATACATGTATATATACGTATATATACATGTATATATACGTATATACATGTATATATACGTATATATACATATATATACGTATATACATATATGTATATACATGTATATATG	A	.	PASS	AC=2602;AF=0.519569;AFR_AF=0.5696;AMR_AF=0.4496;AN=5008;CS=DEL_pindel;EAS_AF=0.6716;END=10834879;EUR_AF=0.4264;NS=2504;SAS_AF=0.4407;SITEPOST=0.99365;SVTYPE=DEL	GT	0|1
7	13649223	ALU_umary_ALU_5834	T	<INS:ME:ALU>	.	.	AC=290;AF=0.0579074;AFR_AF=0.0068;AMR_AF=0.0706;AN=5008;CS=ALU_umary;EAS_AF=0.0149;EUR_AF=0.1153;MEINFO=AluUndef,6,280,-;NS=2504;SAS_AF=0.1033;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=CTATATCAGACCTCTT	GT	1|0
7	13663189	DEL_pindel_21748	GAAATGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTCGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	G	.	PASS	AC=4701;AF=0.938698;AFR_AF=0.8094;AMR_AF=0.9697;AN=5008;CS=DEL_pindel;EAS_AF=0.9851;END=13663455;EUR_AF=0.9881;MEINFO=AluY,44,281,+;NS=2504;SAS_AF=0.9928;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|1
7	14451264	DEL_pindel_21764	ATCTTTCAAGGTGGCTGTAAGATAAACAGTATAATACACACATCTTAACACATTTTCTGACAATGATAACTGTTCTTCAGACAAAAACTTCTATCCTAATAGTTTCTCATCTTTCTCCCCTACCTCTTTCTTTTTTTTCTGGAAATAATTATAGATACAAAGAAAGC	A	.	PASS	AC=3392;AF=0.677316;AFR_AF=0.612;AMR_AF=0.6383;AN=5008;CS=DEL_pindel;EAS_AF=0.6468;END=14451430;EUR_AF=0.8211;NS=2504;SAS_AF=0.6769;SITEPOST=0.9991;SVTYPE=DEL	GT	0|1
7	14680853	DEL_pindel_21769	TTTTACAATATAGGGATTTGGTTTACAATATAGGGATTTGGTTTACAATATAGGGATTTGGTTTACAATATAGGGATTTGG	T	.	PASS	AC=1644;AF=0.328275;AFR_AF=0.3079;AMR_AF=0.4496;AN=5008;CS=DEL_pindel;EAS_AF=0.2173;END=14680933;EUR_AF=0.3917;NS=2504;SAS_AF=0.319;SITEPOST=0.9962;SVTYPE=DEL	GT	1|0
7	14910419	DEL_pindel_21778	TAAAAAAAAGAAAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGAGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3735;AF=0.745807;AFR_AF=0.7088;AMR_AF=0.7752;AN=5008;CS=DEL_pindel;EAS_AF=0.7609;END=14910737;EUR_AF=0.7584;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.7464;SITEPOST=0.9456;SVTYPE=DEL_ALU	GT	1|1
7	16171771	BI_GS_DEL1_B5_P1255_195	A	<CN0>	100	PASS	AC=2171;AF=0.433506;AFR_AF=0.1505;AMR_AF=0.3991;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.627;END=16174073;EUR_AF=0.4165;MC=YL_CN_CEU_2045,YL_CN_MXL_1371,YL_CN_GIH_1263,SI_BD_7581,EM_DL_DEL88362,UW_VH_5820,YL_CN_GWD_2249;NS=2504;SAS_AF=0.6585;SVTYPE=DEL	GT	1|0
7	16936287	DEL_pindel_21852	TAGAAGTGATGAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3069;AF=0.612819;AFR_AF=0.5537;AMR_AF=0.6859;AN=5008;CS=DEL_pindel;EAS_AF=0.5605;END=16936626;EUR_AF=0.7117;MEINFO=AluYa1_2,1,281,+;NS=2504;SAS_AF=0.593;SITEPOST=0.9844;SVTYPE=DEL_ALU	GT	1|0
7	17969699	DEL_pindel_21876	TAAGAAAAAGAATAAAGAATAAGAATAAGAATAAAGAATAAAGAATAAGAATAAAGAAATAAGAATA	T	.	PASS	AC=2288;AF=0.456869;AFR_AF=0.4705;AMR_AF=0.5648;AN=5008;CS=DEL_pindel;EAS_AF=0.374;END=17969765;EUR_AF=0.5905;NS=2504;SAS_AF=0.3098;SITEPOST=0.9992;SVTYPE=DEL	GT	0|1
7	22434787	UW_VH_11442	G	<CN0>	100	PASS	AC=2517;AF=0.502596;AFR_AF=0.5242;AMR_AF=0.3833;AN=5008;CIEND=0,450;CIPOS=-703,0;CS=DEL_union;EAS_AF=0.5764;END=22436761;EUR_AF=0.4622;MC=UW_VH_21099,UW_VH_17066,UW_VH_2180,BI_GS_DEL1_B1_P1261_439,UW_VH_7864,EM_DL_DEL10989811,UW_VH_4284,UW_VH_9952,UW_VH_11639,YL_CN_YRI_2082,UW_VH_18955;NS=2504;SAS_AF=0.5235;SVTYPE=DEL	GT	1|0
7	24038171	UW_VH_18963	T	<CN0>	100	PASS	AC=3828;AF=0.764377;AFR_AF=0.8381;AMR_AF=0.6513;AN=5008;CIEND=0,532;CIPOS=-541,0;CS=DEL_union;EAS_AF=0.7907;END=24040063;EUR_AF=0.6551;MC=YL_CN_MSL_1539,YL_CN_CEU_2057,EM_DL_DEL10990297,UW_VH_21085,BI_GS_DEL1_B1_P1263_35,YL_CN_LWK_1573,UW_VH_616,YL_CN_KHV_1670,YL_CN_IBS_1434;NS=2504;SAS_AF=0.8303;SVTYPE=DEL	GT	1|1
7	25044601	DEL_pindel_22008	TGAGAAACTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAAA	T	.	PASS	AC=3602;AF=0.719249;AFR_AF=0.7579;AMR_AF=0.7161;AN=5008;CS=DEL_pindel;EAS_AF=0.6915;END=25044930;EUR_AF=0.6571;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.7618;SITEPOST=0.98405;SVTYPE=DEL_ALU	GT	1|0
7	28214282	BI_GS_DEL1_B2_P1267_181	T	<CN0>	100	PASS	AC=1062;AF=0.212061;AFR_AF=0.0711;AMR_AF=0.3401;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0149;END=28214660;EUR_AF=0.506;MC=DEL_pindel_22064,UW_VH_620;NS=2504;SAS_AF=0.2127;SVTYPE=DEL	GT	1|1
7	28574294	BI_GS_DEL1_B1_P1267_560	C	<CN0>	100	PASS	AC=790;AF=0.157748;AFR_AF=0.177;AMR_AF=0.1585;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0764;END=28575147;EUR_AF=0.2584;MC=UW_VH_1329,UW_VH_11099;NS=2504;SAS_AF=0.1115;SVTYPE=DEL	GT	0|1
7	29476917	DEL_pindel_22098	TAAGATATCTAAAACCGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	T	.	PASS	AC=935;AF=0.186701;AFR_AF=0.3495;AMR_AF=0.17;AN=5008;CS=DEL_pindel;EAS_AF=0.0625;END=29477227;EUR_AF=0.174;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.1196;SITEPOST=0.9956;SVTYPE=DEL_ALU	GT	0|1
7	32286850	DEL_pindel_22163	GAATTGAAGCAGTGGCCACAGACCAGGTCTTGGGAGCCTAGGGCTTCTTGGCCAAACTCAAATTTTTTTATTTATTGTCTGTCTGTATGAGGGTAAGGGCTCCTGTCTTAAGCATTGCTGTGTCCTCAATGCCCAGGATAAGGAATGATACATGGCAAATTCTCTCAAGAATCATTTGTTAAGGCAATGAATTAATTTTATCCCAAAGGTGATGGGTGGGCCATAGTAAGCCCACTGAAGCAATGGGATAAAACTTGGCCTGGAAGAAGA	G	.	PASS	AC=474;AF=0.0946486;AFR_AF=0.1104;AMR_AF=0.0778;AN=5008;CS=DEL_pindel;EAS_AF=0.126;END=32287119;EUR_AF=0.0905;NS=2504;SAS_AF=0.0573;SITEPOST=1;SVTYPE=DEL	GT	1|0
7	32811206	DEL_pindel_22181	GGCAGAGCTGAGCATGCTTGGTTTATTCTCTGCAAATTCATGATGCATGGTTCA	G	.	PASS	AC=1016;AF=0.202875;AFR_AF=0.2231;AMR_AF=0.1499;AN=5008;CS=DEL_pindel;EAS_AF=0.122;END=32811259;EUR_AF=0.164;NS=2504;SAS_AF=0.3364;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
7	33712013	DEL_pindel_22189	TCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTCCCTTCCTC	T	.	PASS	AC=3750;AF=0.748802;AFR_AF=0.6089;AMR_AF=0.7824;AN=5008;CS=DEL_pindel;EAS_AF=0.8155;END=33712074;EUR_AF=0.7654;NS=2504;SAS_AF=0.8282;SITEPOST=0.97935;SVTYPE=DEL	GT	1|1
7	33898841	DEL_pindel_22194	TTGAGCCTGGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=4274;AF=0.853435;AFR_AF=0.8177;AMR_AF=0.8876;AN=5008;CS=DEL_pindel;EAS_AF=0.8681;END=33899172;EUR_AF=0.8678;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.8476;SITEPOST=0.9849;SVTYPE=DEL_ALU	GT	1|1
7	34492801	ALU_umary_ALU_5948	T	<INS:ME:ALU>	.	.	AC=232;AF=0.0463259;AFR_AF=0.1407;AMR_AF=0.0216;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0298;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.001;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAATTCTAGGGCT	GT	1|0
7	36878879	DEL_pindel_22266	AACATCTTTGTGGAATTACTCAGTTTTGGTGTCACTAAAGTCGGCCTCCATTCAAGCCCGTCTCCTCATGCTCTAGGTCTTCTGATTTAG	A	.	PASS	AC=1987;AF=0.396765;AFR_AF=0.2852;AMR_AF=0.4265;AN=5008;CS=DEL_pindel;EAS_AF=0.4524;END=36878968;EUR_AF=0.498;NS=2504;SAS_AF=0.365;SITEPOST=0.9996;SVTYPE=DEL	GT	1|1
7	37836651	ALU_umary_ALU_5967	T	<INS:ME:ALU>	.	.	AC=2455;AF=0.490216;AFR_AF=0.4887;AMR_AF=0.4366;AN=5008;CS=ALU_umary;EAS_AF=0.5308;EUR_AF=0.503;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.4755;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TGCTCCCCTCTCTTT	GT	0|1
7	38116201	ALU_umary_ALU_5969	T	<INS:ME:ALU>	.	.	AC=302;AF=0.0603035;AFR_AF=0.0008;AMR_AF=0.0259;AN=5008;CS=ALU_umary;EAS_AF=0.0903;EUR_AF=0.0636;MEINFO=AluYb7_2,1,270,-;NS=2504;SAS_AF=0.1309;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=CTTTGTCTTATTTTT	GT	0|1
7	39380342	DEL_pindel_22275	AGGTGCATTCATATATATATATATATATATATGACTTTAAACTTCAGAAAACCATTTTTAACTTAG	A	.	PASS	AC=2845;AF=0.568091;AFR_AF=0.5628;AMR_AF=0.5519;AN=5008;CS=DEL_pindel;EAS_AF=0.7431;END=39380407;EUR_AF=0.5577;NS=2504;SAS_AF=0.4172;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
7	39387270	BI_GS_DEL1_B2_P1278_285	A	<CN0>	100	PASS	AC=620;AF=0.123802;AFR_AF=0.084;AMR_AF=0.2248;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0278;END=39387889;EUR_AF=0.2087;NS=2504;SAS_AF=0.1176;SVTYPE=DEL	GT	0|1
7	40879271	INV_delly_INV00092650	G	<INV>	.	PASS	AC=2443;AF=0.487819;AFR_AF=0.5038;AMR_AF=0.3991;AN=5008;CIEND=-209,209;CIPOS=-209,209;CS=INV_delly;EAS_AF=0.7827;END=40880479;EUR_AF=0.3668;IMPRECISE;NS=2504;SAS_AF=0.3497;SITEPOST=1;SVTYPE=INV	GT	1|0
7	42549700	DEL_pindel_22344	TAAAGAGGAATGAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCACAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3362;AF=0.671326;AFR_AF=0.6536;AMR_AF=0.6412;AN=5008;CS=DEL_pindel;EAS_AF=0.7331;END=42550022;EUR_AF=0.5974;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.729;SITEPOST=0.9796;SVTYPE=DEL_ALU	GT	1|0
7	47089458	BI_GS_DEL1_B3_P1286_1	T	<CN0>	100	PASS	AC=11;AF=0.00219649;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=-36,36;CIPOS=-36,36;CS=DEL_union;EAS_AF=0;END=47092817;EUR_AF=0.0089;MC=SI_BD_7745,UW_VH_4545;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	1|0
7	47219078	DEL_pindel_22441	TTGCAGCTTGGGATGTAAGCAGTAGGCTACATTTCCTTCTGCTGGGCATGTGCCACAGCCGCCCTGCAAGCCACTGTCTGAAGGGTGTCCCTCACTC	T	.	PASS	AC=672;AF=0.134185;AFR_AF=0.0295;AMR_AF=0.1282;AN=5008;CS=DEL_pindel;EAS_AF=0.2272;END=47219174;EUR_AF=0.1412;NS=2504;SAS_AF=0.1769;SITEPOST=0.9995;SVTYPE=DEL	GT	0|1
7	47551089	ALU_umary_ALU_6012	A	<INS:ME:ALU>	.	.	AC=919;AF=0.183506;AFR_AF=0.0923;AMR_AF=0.2493;AN=5008;CS=ALU_umary;EAS_AF=0.2024;EUR_AF=0.2724;MEINFO=AluYd8,3,277,-;NS=2504;SAS_AF=0.1493;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=CTTAAATATTTTA	GT	1|0
7	49057624	ALU_umary_ALU_6021	T	<INS:ME:ALU>	.	.	AC=2228;AF=0.444888;AFR_AF=0.5983;AMR_AF=0.4193;AN=5008;CS=ALU_umary;EAS_AF=0.2817;EUR_AF=0.4533;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.4151;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GCCTGTAGCTTGGTTCT	GT	1|0
7	49725896	L1_umary_LINE1_1503	C	<INS:ME:LINE1>	.	.	AC=2805;AF=0.560104;AFR_AF=0.6225;AMR_AF=0.4755;AN=5008;CS=L1_umary;EAS_AF=0.5456;EUR_AF=0.5378;MEINFO=LINE1,5545,5845,-;NS=2504;SAS_AF=0.5736;SITEPOST=0.9996;SVLEN=300;SVTYPE=LINE1;TSD=null	GT	0|1
7	50104763	BI_GS_DEL1_B2_P1289_68	C	<CN0>	100	PASS	AC=189;AF=0.0377396;AFR_AF=0.0832;AMR_AF=0.0231;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=50106067;EUR_AF=0.0547;MC=SI_BD_7759,UW_VH_2223;NS=2504;SAS_AF=0.0082;SVTYPE=DEL	GT	0|1
7	51081675	DEL_pindel_22528	AGGCTCTGGCGCTTGGTTAGCTCTGAGGTCAGTGTAAGGAAGAGGGGAACAGGTCAGAG	A	.	PASS	AC=1487;AF=0.296925;AFR_AF=0.0446;AMR_AF=0.33;AN=5008;CS=DEL_pindel;EAS_AF=0.3234;END=51081733;EUR_AF=0.5139;NS=2504;SAS_AF=0.364;SITEPOST=0.9996;SVTYPE=DEL	GT	1|0
7	51594315	UW_VH_10840	T	<CN0>	100	PASS	AC=2682;AF=0.535543;AFR_AF=0.4637;AMR_AF=0.5432;AN=5008;CIEND=0,396;CIPOS=-524,0;CS=DEL_union;EAS_AF=0.5893;END=51598689;EUR_AF=0.505;MC=EM_DL_DEL89966,UW_VH_11111,UW_VH_20840,SI_BD_7763,YL_CN_CLM_1409,UW_VH_2971;NS=2504;SAS_AF=0.6033;SVTYPE=DEL	GT	1|0
7	52094962	DEL_pindel_22566	TAAAAAATGACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAATTACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3752;AF=0.749201;AFR_AF=0.5817;AMR_AF=0.781;AN=5008;CS=DEL_pindel;EAS_AF=0.8115;END=52095275;EUR_AF=0.833;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.8027;SITEPOST=0.9744;SVTYPE=DEL_ALU	GT	0|1
7	52107107	DEL_pindel_22567	GAAAAGTAAAAGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATGGGAGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTGACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCGCTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAC	G	.	PASS	AC=2174;AF=0.434105;AFR_AF=0.3048;AMR_AF=0.4524;AN=5008;CS=DEL_pindel;EAS_AF=0.6111;END=52107424;EUR_AF=0.4254;MEINFO=AluYg5b3,1,281,+;NS=2504;SAS_AF=0.4223;SITEPOST=0.9927;SVTYPE=DEL_ALU	GT	1|0
7	52520168	BI_GS_DEL1_B5_P1291_589	T	<CN0>	100	PASS	AC=2343;AF=0.467851;AFR_AF=0.1717;AMR_AF=0.4726;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7401;END=52520372;EUR_AF=0.5209;MC=UW_VH_2070,DEL_pindel_22574;NS=2504;SAS_AF=0.5297;SVTYPE=DEL	GT	1|0
7	53652516	L1_umary_LINE1_1510	A	<INS:ME:LINE1>	.	.	AC=632;AF=0.126198;AFR_AF=0.0219;AMR_AF=0.1571;AN=5008;CS=L1_umary;EAS_AF=0.0992;EUR_AF=0.2197;MEINFO=LINE1,1,6016,-;NS=2504;SAS_AF=0.1769;SITEPOST=1;SVLEN=6015;SVTYPE=LINE1;TSD=TTATTTGTTTTTTTA	GT	0|1
7	56244918	ALU_umary_ALU_6061	C	<INS:ME:ALU>	.	.	AC=2157;AF=0.430711;AFR_AF=0.5015;AMR_AF=0.4496;AN=5008;CS=ALU_umary;EAS_AF=0.253;EUR_AF=0.493;MEINFO=AluYb6_2,16,270,+;NS=2504;SAS_AF=0.4407;SITEPOST=1;SVLEN=254;SVTYPE=ALU;TSD=AAAAGTAATCATCAC	GT	1|1
7	56435784	YL_CN_IBS_1466	G	<CN0>	100	PASS	AC=3046;AF=0.608227;AFR_AF=0.6641;AMR_AF=0.5418;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.627;END=56438107;EUR_AF=0.6113;MC=YL_CN_PJL_1707;NS=2504;SAS_AF=0.5573;SVTYPE=DEL	GT	1|1
7	57164992	YL_CN_FIN_1575	C	<CN0>	100	PASS	AC=12;AF=0.00239617;AFR_AF=0;AMR_AF=0.0029;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=57173720;EUR_AF=0.0099;MC=UW_VH_5072,BI_GS_DEL1_B1_P1296_7;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0|1
7	57957715	EM_DL_DEL101005203	A	<CN0>	100	PASS	AC=2294;AF=0.458067;AFR_AF=0.3971;AMR_AF=0.6513;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.2927;END=57959407;EUR_AF=0.5268;MC=YL_CN_CEU_2119,YL_CN_CDX_1403,YL_CN_CHB_1672,YL_CN_MSL_1586,YL_CN_MXL_1410,YL_CN_BEB_1432;NS=2504;SAS_AF=0.5031;SVTYPE=DEL	GT	1|0
7	61510866	YL_CN_ESN_1740	T	<CN0>	100	PASS	AC=962;AF=0.192093;AFR_AF=0.1626;AMR_AF=0.1282;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1756;END=61515334;EUR_AF=0.2624;NS=2504;SAS_AF=0.2219;SVTYPE=DEL	GT	1|0
7	61971096	YL_CN_CDX_1416	T	<CN0>	100	PASS	AC=2870;AF=0.573083;AFR_AF=0.5923;AMR_AF=0.683;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.5456;END=61975635;EUR_AF=0.508;MC=YL_CN_GIH_1309,YL_CN_STU_1647;NS=2504;SAS_AF=0.5644;SVTYPE=DEL	GT	1|0
7	62002293	BI_GS_DEL1_B1_P1301_1	A	<CN0>	100	PASS	AC=2300;AF=0.459265;AFR_AF=0.4342;AMR_AF=0.6441;AN=5008;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.3452;END=62004875;EUR_AF=0.4751;MC=YL_CN_CHS_1696;NS=2504;SAS_AF=0.4632;SVTYPE=DEL	GT	1|0
7	62366086	BI_GS_DEL1_B5_P1301_79	A	<CN0>	100	PASS	AC=1562;AF=0.311901;AFR_AF=0.3578;AMR_AF=0.2493;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2302;END=62369684;EUR_AF=0.3867;MC=YL_CN_MSL_1604;NS=2504;SAS_AF=0.3016;SVTYPE=DEL	GT	0|1
7	64413378	BI_GS_DEL1_B2_P1303_257	T	<CN0>	100	PASS	AC=1606;AF=0.320687;AFR_AF=0.1687;AMR_AF=0.2507;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3978;END=64414031;EUR_AF=0.3986;MC=UW_VH_2071,SI_BD_7842;NS=2504;SAS_AF=0.4162;SVTYPE=DEL	GT	0|1
7	65589712	UW_VH_1791	C	<CN0>	100	PASS	AC=399;AF=0.0796725;AFR_AF=0.0061;AMR_AF=0.1009;AN=5008;CIEND=0,416;CIPOS=-399,0;CS=DEL_union;EAS_AF=0.1111;END=65591959;EUR_AF=0.1173;MC=SI_BD_7852,BI_GS_DEL1_B1_P1304_272,YL_CN_ITU_1695,YL_CN_STU_1681,EM_DL_DEL90944;NS=2504;SAS_AF=0.093;SVTYPE=DEL	GT	0|1
7	66755275	SI_BD_7863	T	<CN0>	100	PASS	AC=362;AF=0.0722843;AFR_AF=0.059;AMR_AF=0.0591;AN=5008;CIEND=-50,140;CIPOS=-140,50;CS=DEL_union;EAS_AF=0.003;END=66756602;EUR_AF=0.1441;NS=2504;SAS_AF=0.0971;SVTYPE=DEL	GT	1|0
7	67113327	DEL_pindel_22704	CGCAGTAGAGGTCTCTAGCAAAGATCTCTTTTAAATACCATAGTTTTTGAAAATGACAGATGCAGATGAAACACTTCAATGTTTAATGTCAAAGTTAATGAAAAATATAATTTGAAGGCAAGAGTG	C	.	PASS	AC=1680;AF=0.335463;AFR_AF=0.3533;AMR_AF=0.3141;AN=5008;CS=DEL_pindel;EAS_AF=0.3889;END=67113452;EUR_AF=0.2684;NS=2504;SAS_AF=0.3405;SITEPOST=0.9993;SVTYPE=DEL	GT	1|1
7	68462070	DEL_pindel_22749	TAAAAAGAAACCCAGGCCGGGCGCGGTGGCTCACGCCTCTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3252;AF=0.649361;AFR_AF=0.4357;AMR_AF=0.6729;AN=5008;CS=DEL_pindel;EAS_AF=0.7679;END=68462389;EUR_AF=0.7237;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7229;SITEPOST=0.9848;SVTYPE=DEL_ALU	GT	1|1
7	70188702	L1_umary_LINE1_1523	T	<INS:ME:LINE1>	.	.	AC=1398;AF=0.279153;AFR_AF=0.0893;AMR_AF=0.3357;AN=5008;CS=L1_umary;EAS_AF=0.5308;EUR_AF=0.1909;MEINFO=LINE1,5670,6018,-;NS=2504;SAS_AF=0.3272;SITEPOST=1;SVLEN=348;SVTYPE=LINE1;TSD=GTAGCTCTGCTCTTATTTATGTATTTT	GT	1|0
7	71211920	UW_VH_15640	C	<CN0>	100	PASS	AC=4486;AF=0.895767;AFR_AF=0.9637;AMR_AF=0.8905;AN=5008;CIEND=0,553;CIPOS=-510,0;CS=DEL_union;EAS_AF=0.9137;END=71212966;EUR_AF=0.834;MC=UW_VH_6271;NS=2504;SAS_AF=0.8528;SVTYPE=DEL	GT	0|1
7	72270263	BI_GS_DEL1_B1_P1311_137	T	<CN0>	100	PASS	AC=1965;AF=0.392372;AFR_AF=0.4584;AMR_AF=0.3545;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5526;END=72275846;EUR_AF=0.2416;MC=SI_BD_7894,YL_CN_ASW_1806,EM_DL_DEL91245,UW_VH_9613;NS=2504;SAS_AF=0.32;SVTYPE=DEL	GT	1|1
7	73549765	UW_VH_643	G	<CN0>	100	PASS	AC=3090;AF=0.617013;AFR_AF=0.4902;AMR_AF=0.6614;AN=5008;CIEND=0,468;CIPOS=-449,0;CS=DEL_union;EAS_AF=0.7887;END=73550955;EUR_AF=0.6292;MC=SI_BD_7903,YL_CN_CHB_1719,YL_CN_FIN_1620,YL_CN_MSL_1631,YL_CN_PUR_2070,YL_CN_LWK_1667,YL_CN_KHV_1764,YL_CN_CDX_1450,YL_CN_GWD_2393,YL_CN_ACB_1982,BI_GS_DEL1_B1_P1312_306,YL_CN_TSI_1625,YL_CN_YRI_2202,YL_CN_JPT_1873,YL_CN_GBR_1663,YL_CN_CEU_2184,YL_CN_STU_1691,YL_CN_PJL_1780,YL_CN_CLM_1475,YL_CN_PEL_1538,YL_CN_CHS_1736,YL_CN_ITU_1704;NS=2504;SAS_AF=0.5675;SVTYPE=DEL	GT	1|1
7	73828493	UW_VH_14202	G	<CN0>	100	PASS	AC=3526;AF=0.704073;AFR_AF=0.767;AMR_AF=0.6081;AN=5008;CIEND=0,462;CIPOS=-555,0;CS=DEL_union;EAS_AF=0.7698;END=73831271;EUR_AF=0.662;MC=YL_CN_LWK_1668,YL_CN_MXL_1447,UW_VH_24703,UW_VH_644,BI_GS_DEL1_B1_P1312_436,UW_VH_6232,UW_VH_5263,EM_DL_DEL91299,UW_VH_6730,YL_CN_CHS_1737,YL_CN_ASW_1809,YL_CN_CHB_1722;NS=2504;SAS_AF=0.6626;SVTYPE=DEL	GT	1|1
7	74772350	UW_VH_25441	A	<CN0>	100	PASS	AC=4163;AF=0.83127;AFR_AF=0.4697;AMR_AF=0.9337;AN=5008;CIEND=0,41;CIPOS=-38,0;CS=DEL_union;EAS_AF=0.9861;END=74774220;EUR_AF=0.9423;NS=2504;SAS_AF=0.9734;SVTYPE=DEL	GT	0|1
7	76144788	DUP_gs_CNV_7_76144788_76157013	C	<CN0>,<CN2>	.	PASS	AC=3299,7;AF=0.658746,0.00139776;AFR_AF=0.7867,0.003;AMR_AF=0.6167,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.5585,0.002;END=76157013;EUR_AF=0.5954,0;MC=BI_GS_DEL1_B2_P1315_38;NS=2504;SAS_AF=0.684,0;SITEPOST=1;SVTYPE=CNV	GT	0|1
7	76567224	ALU_umary_ALU_6114	T	<INS:ME:ALU>	.	.	AC=2336;AF=0.466454;AFR_AF=0.472;AMR_AF=0.3948;AN=5008;CS=ALU_umary;EAS_AF=0.4593;EUR_AF=0.5795;MEINFO=AluUndef,1,272,-;NS=2504;SAS_AF=0.4008;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=TGGCTATTTCTT	GT	1|1
7	76702227	UW_VH_1793	T	<CN0>	100	PASS	AC=271;AF=0.0541134;AFR_AF=0.0053;AMR_AF=0.0663;AN=5008;CIEND=0,329;CIPOS=-321,0;CS=DEL_union;EAS_AF=0.0169;END=76708169;EUR_AF=0.1531;MC=BI_GS_DEL1_B2_P1315_169,YL_CN_STU_1716,EM_DL_DEL91564,SI_BD_7932;NS=2504;SAS_AF=0.0481;SVTYPE=DEL	GT	0|1
7	76870544	UW_VH_646	T	<CN0>	100	PASS	AC=2519;AF=0.502995;AFR_AF=0.205;AMR_AF=0.5735;AN=5008;CIEND=0,511;CIPOS=-464,0;CS=DEL_union;EAS_AF=0.4563;END=76870797;EUR_AF=0.6948;MC=BI_GS_DEL1_B2_P1315_239;NS=2504;SAS_AF=0.7065;SVTYPE=DEL	GT	1|1
7	79742076	DEL_pindel_22937	TCAATCCCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3660;AF=0.730831;AFR_AF=0.6846;AMR_AF=0.7406;AN=5008;CS=DEL_pindel;EAS_AF=0.7917;END=79742408;EUR_AF=0.7048;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7505;SITEPOST=0.96975;SVTYPE=DEL_ALU	GT	1|0
7	81358341	BI_GS_DEL1_B3_P1320_15	C	<CN0>	100	PASS	AC=3917;AF=0.782149;AFR_AF=0.6815;AMR_AF=0.8314;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8532;END=81358609;EUR_AF=0.7634;MC=DEL_pindel_22973;NS=2504;SAS_AF=0.8292;SVTYPE=DEL	GT	0|1
7	81728727	DEL_pindel_22979	AGCAATACCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=1731;AF=0.345647;AFR_AF=0.2784;AMR_AF=0.3919;AN=5008;CS=DEL_pindel;EAS_AF=0.3552;END=81729064;EUR_AF=0.3807;MEINFO=AluYa4_1,1,281,-;NS=2504;SAS_AF=0.3579;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	0|1
7	83050175	BI_GS_DEL1_B4_P1322_13	C	<CN0>	100	PASS	AC=733;AF=0.146366;AFR_AF=0.1271;AMR_AF=0.1455;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.005;END=83051201;EUR_AF=0.2525;MC=UW_VH_2225,SI_BD_7965;NS=2504;SAS_AF=0.2096;SVTYPE=DEL	GT	0|1
7	84901725	L1_umary_LINE1_1534	T	<INS:ME:LINE1>	.	.	AC=2095;AF=0.418331;AFR_AF=0.4085;AMR_AF=0.428;AN=5008;CS=L1_umary;EAS_AF=0.3214;EUR_AF=0.5537;MEINFO=LINE1,5785,6016,-;NS=2504;SAS_AF=0.3855;SITEPOST=1;SVLEN=231;SVTYPE=LINE1;TSD=TT	GT	0|1
7	88091299	DEL_pindel_23091	AACAATATTTTTTTTTTTTTTTTTTAGTATTTGATTGTGTATTTATACCACATTTTCTTTATTTTTTTTTTCTTTTTTTTTTTTTTTTATTATACTCTCAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCC	A	.	PASS	AC=4045;AF=0.807708;AFR_AF=0.6982;AMR_AF=0.8674;AN=5008;CS=DEL_pindel;EAS_AF=0.8274;END=88091749;EUR_AF=0.8658;MEINFO=LINE1,5660,6019,-;NS=2504;SAS_AF=0.8333;SITEPOST=0.9978;SVTYPE=DEL_LINE1	GT	0|1
7	89598872	DEL_pindel_23127	GGACCTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=3403;AF=0.679513;AFR_AF=0.6838;AMR_AF=0.6772;AN=5008;CS=DEL_pindel;EAS_AF=0.7649;END=89599188;EUR_AF=0.6024;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.6667;SITEPOST=0.9942;SVTYPE=DEL_ALU	GT	1|1
7	90022137	DEL_pindel_23139	TAAAAGAATCTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGTGCCTTTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAGAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=903;AF=0.180312;AFR_AF=0.2421;AMR_AF=0.1772;AN=5008;CS=DEL_pindel;EAS_AF=0.1081;END=90022454;EUR_AF=0.1581;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1963;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	0|1
7	90583932	DEL_pindel_23152	TCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTATCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGGTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3326;AF=0.664137;AFR_AF=0.6203;AMR_AF=0.696;AN=5008;CS=DEL_pindel;EAS_AF=0.6409;END=90584239;EUR_AF=0.7068;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.681;SITEPOST=0.93585;SVTYPE=DEL_ALU	GT	0|1
7	91214111	YL_CN_CDX_1479	A	<CN0>	100	PASS	AC=2536;AF=0.50639;AFR_AF=0.7882;AMR_AF=0.3415;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.494;END=91220934;EUR_AF=0.2942;NS=2504;SAS_AF=0.4734;SVTYPE=DEL	GT	1|0
7	93416961	UW_VH_659	T	<CN0>	100	PASS	AC=3090;AF=0.617013;AFR_AF=0.5575;AMR_AF=0.6801;AN=5008;CIEND=0,529;CIPOS=-590,0;CS=DEL_union;EAS_AF=0.6915;END=93422984;EUR_AF=0.6412;MC=YL_CN_CHS_1765,BI_GS_DEL1_B5_P1332_499,YL_CN_CHB_1755,YL_CN_GIH_1371,YL_CN_ESN_1819,YL_CN_MXL_1477,YL_CN_GBR_1697,YL_CN_IBS_1555,YL_CN_CDX_1482,YL_CN_PJL_1822,YL_CN_PUR_2115,YL_CN_FIN_1660;MEINFO=LINE1,8,6019,-;NS=2504;SAS_AF=0.5511;SVTYPE=DEL_LINE1	GT	1|1
7	93541824	BI_GS_DEL1_B3_P1332_24	C	<CN0>	100	PASS	AC=2864;AF=0.571885;AFR_AF=0.3351;AMR_AF=0.6095;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7401;END=93542540;EUR_AF=0.675;MC=UW_VH_660,SI_BD_8012;NS=2504;SAS_AF=0.5859;SVTYPE=DEL	GT	1|0
7	94877512	ALU_umary_ALU_6216	T	<INS:ME:ALU>	.	.	AC=1615;AF=0.322484;AFR_AF=0.3328;AMR_AF=0.2507;AN=5008;CS=ALU_umary;EAS_AF=0.3065;EUR_AF=0.3211;MEINFO=AluUndef,34,281,-;NS=2504;SAS_AF=0.3773;SITEPOST=1;SVLEN=247;SVTYPE=ALU;TSD=TAAAAATATATTTT	GT	1|0
7	95386253	DEL_pindel_23233	ACTCATTGGATTTGTTTTTTTTTGTTTTTTTTTGTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCATTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTCTG	A	.	PASS	AC=3958;AF=0.790335;AFR_AF=0.8699;AMR_AF=0.647;AN=5008;CS=DEL_pindel;EAS_AF=0.8958;END=95386584;EUR_AF=0.6233;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.8476;SITEPOST=0.9992;SVTYPE=DEL_ALU	GT	0|1
7	96067512	DEL_pindel_23243	TAAGAATTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACTCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3610;AF=0.720847;AFR_AF=0.7209;AMR_AF=0.7536;AN=5008;CS=DEL_pindel;EAS_AF=0.7569;END=96067827;EUR_AF=0.7485;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6319;SITEPOST=0.9961;SVTYPE=DEL_ALU	GT	1|1
7	96543286	UW_VH_1796	T	<CN0>	100	PASS	AC=1163;AF=0.232228;AFR_AF=0.2254;AMR_AF=0.2723;AN=5008;CIEND=0,404;CIPOS=-463,0;CS=DEL_union;EAS_AF=0.1052;END=96546589;EUR_AF=0.3131;MC=SI_BD_8020,EM_DL_DEL92073,BI_GS_DEL1_B1_P1335_483,YL_CN_CDX_1485;NS=2504;SAS_AF=0.2607;SVTYPE=DEL	GT	1|0
7	99146666	ALU_umary_ALU_6237	G	<INS:ME:ALU>	.	.	AC=2418;AF=0.482827;AFR_AF=0.4849;AMR_AF=0.4654;AN=5008;CS=ALU_umary;EAS_AF=0.5099;EUR_AF=0.4911;MEINFO=AluUndef,2,239,-;NS=2504;SAS_AF=0.456;SITEPOST=1;SVLEN=237;SVTYPE=ALU;TSD=GCCTGG	GT	1|0
7	100327576	UW_VH_4850	C	<CN0>	100	PASS	AC=884;AF=0.176518;AFR_AF=0.1815;AMR_AF=0.1859;AN=5008;CIEND=0,543;CIPOS=-325,0;CS=DEL_union;EAS_AF=0.1448;END=100340737;EUR_AF=0.2376;MC=UW_VH_21138,EM_DL_DEL92425,SI_BD_8040,YL_CN_CLM_1511,UW_VH_2558,BI_GS_DEL1_B5_P1339_240;NS=2504;SAS_AF=0.1329;SVTYPE=DEL	GT	1|0
7	101059153	BI_GS_DEL1_B4_P1340_10	A	<CN0>	100	PASS	AC=638;AF=0.127396;AFR_AF=0.0514;AMR_AF=0.1441;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.004;END=101060267;EUR_AF=0.2724;MC=UW_VH_23,EM_DL_DEL101021189;NS=2504;SAS_AF=0.1963;SVTYPE=DEL	GT	1|1
7	101334195	DEL_pindel_23337	ACACCTGGCTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=3191;AF=0.637181;AFR_AF=0.6286;AMR_AF=0.6441;AN=5008;CS=DEL_pindel;EAS_AF=0.6587;END=101334515;EUR_AF=0.6362;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6227;SITEPOST=0.95865;SVTYPE=DEL_ALU	GT	1|0
7	102366705	UW_VH_1798	T	<CN0>	100	PASS	AC=278;AF=0.0555112;AFR_AF=0.1445;AMR_AF=0.0418;AN=5008;CIEND=0,342;CIPOS=-358,0;CS=DEL_union;EAS_AF=0.002;END=102374343;EUR_AF=0.0447;MC=BI_GS_DEL1_B2_P1341_75,SI_BD_8062,YL_CN_ESN_1836;NS=2504;SAS_AF=0.0112;SVTYPE=DEL	GT	1|0
7	103874937	DEL_pindel_23368	CAAAAGCCTTCCTCAGGCCGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCTGTCTCTACTAAAAATAAAAAAATTAGCCAGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	C	.	PASS	AC=2414;AF=0.482029;AFR_AF=0.4607;AMR_AF=0.5346;AN=5008;CS=DEL_pindel;EAS_AF=0.5308;END=103875244;EUR_AF=0.3877;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5204;SITEPOST=0.9951;SVTYPE=DEL_ALU	GT	1|0
7	104129515	DEL_pindel_23373	TGTGCTGAAATCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCATTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTG	T	.	PASS	AC=1925;AF=0.384385;AFR_AF=0.3268;AMR_AF=0.4006;AN=5008;CS=DEL_pindel;EAS_AF=0.3313;END=104129796;EUR_AF=0.5417;MEINFO=AluY,35,281,-;NS=2504;SAS_AF=0.3436;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|0
7	104187384	DEL_pindel_23375	TAAGAAATAGTAGCTCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2314;AF=0.462061;AFR_AF=0.4289;AMR_AF=0.4611;AN=5008;CS=DEL_pindel;EAS_AF=0.4573;END=104187715;EUR_AF=0.5268;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4458;SITEPOST=0.9984;SVTYPE=DEL_ALU	GT	0|1
7	104204602	DEL_pindel_23377	CTGACAGAATCAGGATTTTCACTTATGTTTGTTTCACTTAAAACCTATGCCCATAACACCATGTTATGGGTTCTATTACCACTGCTTCTACTGAATGATGTTTGGAGGACTGAGTTAGGGTCTTAGCTTTGCTAATCACATCCCAGATGCAGTAATTCTTGATATAG	C	.	PASS	AC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=5008;CS=DEL_pindel;EAS_AF=0;END=104204768;EUR_AF=0.001;NS=2504;SAS_AF=0;SITEPOST=0.9987;SVTYPE=DEL	GT	0|1
7	107464069	BI_GS_DEL1_B4_P1346_101	A	<CN0>	100	PASS	AC=1304;AF=0.260383;AFR_AF=0.0809;AMR_AF=0.3084;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4742;END=107464744;EUR_AF=0.2167;MC=DEL_pindel_23462,SI_BD_8091,UW_VH_1484;NS=2504;SAS_AF=0.2935;SVTYPE=DEL	GT	1|0
7	107818074	DEL_pindel_23466	ATATATATATATATATATATATATATATATATGTATATACGTGTATATATATACGTGTATATATATATACACGTATATATATATATACGTGTG	A	.	PASS	AC=3262;AF=0.651358;AFR_AF=0.3328;AMR_AF=0.7594;AN=5008;CS=DEL_pindel;EAS_AF=0.8571;END=107818166;EUR_AF=0.7376;NS=2504;SAS_AF=0.7045;SITEPOST=0.9813;SVTYPE=DEL	GT	1|1
7	107829263	L1_umary_LINE1_1566	A	<INS:ME:LINE1>	.	.	AC=2763;AF=0.551717;AFR_AF=0.3442;AMR_AF=0.5965;AN=5008;CS=L1_umary;EAS_AF=0.756;EUR_AF=0.5875;MEINFO=LINE1,1,6019,-;NS=2504;SAS_AF=0.5532;SITEPOST=1;SVLEN=6018;SVTYPE=LINE1;TSD=TAAATTTTAGTGGAA	GT	0|1
7	108352846	DEL_pindel_23477	CAAGAGGAAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGCCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2248;AF=0.448882;AFR_AF=0.6377;AMR_AF=0.4971;AN=5008;CS=DEL_pindel;EAS_AF=0.1746;END=108353171;EUR_AF=0.4712;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4192;SITEPOST=0.9988;SVTYPE=DEL_ALU	GT	1|0
7	108501444	DEL_pindel_23480	GCTTGATTTAATCTAGGTAATTCAGAAGTAATCTAGCCTCTGAATTTTTCTGTGTTTGTTTTGCTTCATTTGTTTACGAGGGAGTGAATCTTCATCCTAATC	G	.	PASS	AC=3845;AF=0.767772;AFR_AF=0.323;AMR_AF=0.8991;AN=5008;CS=DEL_pindel;EAS_AF=0.9286;END=108501545;EUR_AF=0.9344;NS=2504;SAS_AF=0.9387;SITEPOST=0.9999;SVTYPE=DEL	GT	1|1
7	109283352	ALU_umary_ALU_6283	T	<INS:ME:ALU>	.	.	AC=1440;AF=0.28754;AFR_AF=0.0567;AMR_AF=0.3588;AN=5008;CS=ALU_umary;EAS_AF=0.4107;EUR_AF=0.4205;MEINFO=AluUndef,1,244,+;NS=2504;SAS_AF=0.2853;SITEPOST=1;SVLEN=243;SVTYPE=ALU;TSD=AAAAGACCATTAGT	GT	0|1
7	109436701	SI_BD_8097	G	<CN0>	100	PASS	AC=1193;AF=0.238219;AFR_AF=0.1127;AMR_AF=0.4337;AN=5008;CIEND=-130,234;CIPOS=-234,98;CS=DEL_union;EAS_AF=0.2401;END=109453942;EUR_AF=0.3549;MC=EM_DL_DEL92814,BI_GS_DEL1_B1_P1348_330,YL_CN_ITU_1761;NS=2504;SAS_AF=0.1472;SVTYPE=DEL	GT	1|1
7	110181927	UW_VH_15286	T	<CN0>	100	PASS	AC=1110;AF=0.221645;AFR_AF=0.2254;AMR_AF=0.2536;AN=5008;CIEND=0,442;CIPOS=-439,0;CS=DEL_union;EAS_AF=0.1409;END=110188432;EUR_AF=0.3151;MC=UW_VH_3882,BI_GS_DEL1_B2_P1349_117,UW_VH_671,UW_VH_19448,EM_DL_DEL92830,SI_BD_8102,YL_CN_BEB_1513;NS=2504;SAS_AF=0.181;SVTYPE=DEL	GT	0|1
7	110484750	L1_umary_LINE1_1572	T	<INS:ME:LINE1>	.	.	AC=1734;AF=0.346246;AFR_AF=0.3396;AMR_AF=0.2507;AN=5008;CS=L1_umary;EAS_AF=0.4157;EUR_AF=0.2903;MEINFO=LINE1,5937,6019,+;NS=2504;SAS_AF=0.409;SITEPOST=1;SVLEN=82;SVTYPE=LINE1;TSD=null	GT	0|1
7	111065333	BI_GS_DEL1_B4_P1350_9	C	<CN0>	100	PASS	AC=108;AF=0.0215655;AFR_AF=0.0348;AMR_AF=0.0303;AN=5008;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.004;END=111067265;EUR_AF=0.0298;MC=UW_VH_2383,SI_BD_8111;NS=2504;SAS_AF=0.0072;SVTYPE=DEL	GT	1|0
7	114956601	ALU_umary_ALU_6307	T	<INS:ME:ALU>	.	.	AC=450;AF=0.0898562;AFR_AF=0.1354;AMR_AF=0.085;AN=5008;CS=ALU_umary;EAS_AF=0.0298;EUR_AF=0.1233;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.0593;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GTAAAATGACTTTT	GT	0|1
7	118083314	ALU_umary_ALU_6320	T	<INS:ME:ALU>	.	.	AC=2145;AF=0.428315;AFR_AF=0.4546;AMR_AF=0.3963;AN=5008;CS=ALU_umary;EAS_AF=0.3919;EUR_AF=0.4105;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0.4714;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAATAATTCCT	GT	1|1
7	118831254	UW_VH_13714	A	<CN0>	100	PASS	AC=2552;AF=0.509585;AFR_AF=0.5272;AMR_AF=0.4669;AN=5008;CIEND=0,343;CIPOS=-415,0;CS=DEL_union;EAS_AF=0.3274;END=118834745;EUR_AF=0.5;MC=EM_DL_DEL93047,YL_CN_ASW_1867;NS=2504;SAS_AF=0.7137;SVTYPE=DEL	GT	1|0
7	119558047	ALU_umary_ALU_6326	T	<INS:ME:ALU>	.	.	AC=615;AF=0.122804;AFR_AF=0.2065;AMR_AF=0.0735;AN=5008;CS=ALU_umary;EAS_AF=0.0466;EUR_AF=0.1501;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.0951;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TTCTATGTATAT	GT	0|1
7	126045887	UW_VH_14593	T	<CN0>	100	PASS	AC=2847;AF=0.56849;AFR_AF=0.6165;AMR_AF=0.6311;AN=5008;CIEND=0,438;CIPOS=-447,0;CS=DEL_union;EAS_AF=0.5308;END=126051450;EUR_AF=0.493;MC=EM_DL_DEL93226,UW_VH_21980,UW_VH_1487,UW_VH_5457,SI_BD_8175,UW_VH_17690,UW_VH_5336,UW_VH_24774,UW_VH_17573,YL_CN_TSI_1690,BI_GS_DEL1_B1_P1365_32;NS=2504;SAS_AF=0.5757;SVTYPE=DEL	GT	1|1
7	126775610	DEL_pindel_23831	TAAGAATTAATGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2704;AF=0.539936;AFR_AF=0.7035;AMR_AF=0.3991;AN=5008;CS=DEL_pindel;EAS_AF=0.3006;END=126775700;EUR_AF=0.6014;MEINFO=AluYc,230,282,+;NS=2504;SAS_AF=0.6022;SITEPOST=0.99295;SVTYPE=DEL_ALU	GT	1|1
7	127766414	DEL_pindel_23849	TGGGCACAGCATCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2762;AF=0.551518;AFR_AF=0.7587;AMR_AF=0.5778;AN=5008;CS=DEL_pindel;EAS_AF=0.3313;END=127766728;EUR_AF=0.4901;MEINFO=AluYc2,1,281,-;NS=2504;SAS_AF=0.5429;SITEPOST=0.9965;SVTYPE=DEL_ALU	GT	1|0
7	127929333	ALU_umary_ALU_6383	T	<INS:ME:ALU>	.	.	AC=1806;AF=0.360623;AFR_AF=0.2262;AMR_AF=0.3934;AN=5008;CS=ALU_umary;EAS_AF=0.4127;EUR_AF=0.3897;MEINFO=AluYi6,5,278,-;NS=2504;SAS_AF=0.4356;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=ATGGCCACTATTCTT	GT	1|0
7	129157179	ALU_umary_ALU_6392	G	<INS:ME:ALU>	.	.	AC=2063;AF=0.411941;AFR_AF=0.348;AMR_AF=0.402;AN=5008;CS=ALU_umary;EAS_AF=0.4524;EUR_AF=0.4364;MEINFO=AluUndef,12,281,+;NS=2504;SAS_AF=0.4387;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AGAAAGTGGGAGAGAAGG	GT	1|0
7	133785003	BI_GS_DEL1_B1_P1372_693	C	<CN0>	100	PASS	AC=1392;AF=0.277955;AFR_AF=0.1846;AMR_AF=0.4524;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2173;END=133798330;EUR_AF=0.3817;MC=UW_VH_8239,YL_CN_MSL_1703,EM_DL_DEL93438,UW_VH_10841,UW_VH_3046,UW_VH_11574,SI_BD_8221,UW_VH_18002,UW_VH_1983,UW_VH_5362;NS=2504;SAS_AF=0.2362;SVTYPE=DEL	GT	0|1
7	134424656	ALU_umary_ALU_6411	T	<INS:ME:ALU>	.	.	AC=619;AF=0.123602;AFR_AF=0.1074;AMR_AF=0.085;AN=5008;CS=ALU_umary;EAS_AF=0.1706;EUR_AF=0.1203;MEINFO=AluYa5,3,280,-;NS=2504;SAS_AF=0.1278;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=CATAATTTTATTCTT	GT	0|1
7	138322188	DEL_pindel_24056	GATAGATAGATAGATATATATATATAGATATAGATATAGATATAGATAGATATATATATATATAT	G	.	PASS	AC=2276;AF=0.454473;AFR_AF=0.3207;AMR_AF=0.5014;AN=5008;CS=DEL_pindel;EAS_AF=0.505;END=138322252;EUR_AF=0.504;NS=2504;SAS_AF=0.499;SITEPOST=0.99;SVTYPE=DEL	GT	1|0
7	138742268	DEL_pindel_24070	AAACAATTACATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCAGCCTCCCACAGTGCTGGGATTACAGACGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2620;AF=0.523163;AFR_AF=0.5764;AMR_AF=0.5043;AN=5008;CS=DEL_pindel;EAS_AF=0.5337;END=138742585;EUR_AF=0.4911;MEINFO=AluY,1,281,-;NS=2504;SAS_AF=0.4867;SITEPOST=0.9932;SVTYPE=DEL_ALU	GT	1|1
7	140189249	UW_VH_2076	A	<CN0>	100	PASS	AC=1911;AF=0.381589;AFR_AF=0.298;AMR_AF=0.4611;AN=5008;CIEND=0,359;CIPOS=-364,0;CS=DEL_union;EAS_AF=0.3849;END=140190276;EUR_AF=0.4284;MC=SI_BD_8266,BI_GS_DEL1_B1_P1379_128;NS=2504;SAS_AF=0.3865;SVTYPE=DEL	GT	1|0
7	141113863	DEL_pindel_24131	TCCAAAAACATCATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCGCTGTTTAGCCCAGGCCGGATTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGC	T	.	PASS	AC=2678;AF=0.534744;AFR_AF=0.5726;AMR_AF=0.5418;AN=5008;CS=DEL_pindel;EAS_AF=0.5506;END=141114182;EUR_AF=0.498;MEINFO=AluYb,2,281,-;NS=2504;SAS_AF=0.5;SITEPOST=0.9948;SVTYPE=DEL_ALU	GT	1|0
7	143543598	DUP_gs_CNV_7_143543598_143560593	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=6,3958,255,21;AF=0.00119808,0.790335,0.0509185,0.00419329;AFR_AF=0.003,0.6331,0.1165,0.0129;AMR_AF=0,0.7896,0.0216,0;AN=5008;CS=DUP_gs;EAS_AF=0.002,0.8304,0.0595,0.004;END=143560593;EUR_AF=0,0.9175,0.0159,0;NS=2504;SAS_AF=0,0.8313,0.0102,0;SITEPOST=0.9999;SVTYPE=CNV	GT	2|2
7	144382749	DEL_pindel_24241	TTCACATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATG	T	.	PASS	AC=4384;AF=0.875399;AFR_AF=0.8797;AMR_AF=0.8674;AN=5008;CS=DEL_pindel;EAS_AF=0.8988;END=144382897;EUR_AF=0.827;NS=2504;SAS_AF=0.9008;SITEPOST=0.9928;SVTYPE=DEL	GT	1|1
7	144770375	BI_GS_DEL1_B1_P1383_575	A	<CN0>	100	PASS	AC=292;AF=0.0583067;AFR_AF=0.0741;AMR_AF=0.0548;AN=5008;CIEND=-8,9;CIPOS=-8,9;CS=DEL_union;EAS_AF=0.0079;END=144775211;EUR_AF=0.0924;MC=EM_DL_DEL93717,SI_BD_8285,UW_VH_2746,YL_CN_LWK_1762;NS=2504;SAS_AF=0.0562;SVTYPE=DEL	GT	0|1
7	145063221	DEL_pindel_24264	TAAGATACGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAA	T	.	PASS	AC=999;AF=0.199481;AFR_AF=0.3011;AMR_AF=0.2305;AN=5008;CS=DEL_pindel;EAS_AF=0.0804;END=145063384;EUR_AF=0.1978;MEINFO=LINE1,5958,5973,+;NS=2504;SAS_AF=0.1646;SITEPOST=1;SVTYPE=DEL_LINE1	GT	0|1
7	148063001	DEL_pindel_24321	CGTGTATGCATGTATACATGCGTGTATGCATGTATACATGCGTGTATGCATGTATACATGTGTGTATGCATGTATACATGT	C	.	PASS	AC=1412;AF=0.281949;AFR_AF=0.1747;AMR_AF=0.3458;AN=5008;CS=DEL_pindel;EAS_AF=0.2619;END=148063081;EUR_AF=0.3628;NS=2504;SAS_AF=0.319;SITEPOST=0.59895;SVTYPE=DEL	GT	1|0
7	148072910	UW_VH_11597	C	<CN0>	100	PASS	AC=3299;AF=0.658746;AFR_AF=0.466;AMR_AF=0.8242;AN=5008;CIEND=0,555;CIPOS=-486,0;CS=DEL_union;EAS_AF=0.7113;END=148076327;EUR_AF=0.7932;MC=YL_CN_GIH_1421,EM_DL_DEL93762,UW_VH_689,UW_VH_13646,SI_BD_8312,UW_VH_4916,YL_CN_CDX_1535,UW_VH_20841,YL_CN_BEB_1550,BI_GS_DEL1_B1_P1387_60,UW_VH_21242,UW_VH_7804,YL_CN_CHB_1839,YL_CN_ESN_1895;NS=2504;SAS_AF=0.6094;SVTYPE=DEL	GT	1|0
7	148818174	DEL_pindel_24331	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2844;AF=0.567891;AFR_AF=0.3767;AMR_AF=0.5807;AN=5008;CS=DEL_pindel;EAS_AF=0.6895;END=148818486;EUR_AF=0.5755;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.684;SITEPOST=0.896;SVTYPE=DEL_ALU	GT	0|1
7	149847612	UW_VH_6078	A	<CN0>	100	PASS	AC=1403;AF=0.280152;AFR_AF=0.0711;AMR_AF=0.2075;AN=5008;CIEND=0,392;CIPOS=-372,0;CS=DEL_union;EAS_AF=0.4633;END=149849125;EUR_AF=0.2634;MC=SI_BD_8324,BI_GS_DEL1_B2_P1388_584;NS=2504;SAS_AF=0.4427;SVTYPE=DEL	GT	1|0
7	152245349	BI_GS_DEL1_B5_P1391_195	A	<CN0>	100	PASS	AC=2531;AF=0.505391;AFR_AF=0.2648;AMR_AF=0.5634;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7669;END=152246306;EUR_AF=0.4284;MC=SI_BD_8346;NS=2504;SAS_AF=0.5992;SVTYPE=DEL	GT	1|0
7	152419399	DEL_pindel_24409	TGGATCACTACTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTTACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2212;AF=0.441693;AFR_AF=0.3381;AMR_AF=0.402;AN=5008;CS=DEL_pindel;EAS_AF=0.5069;END=152419715;EUR_AF=0.5258;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.456;SITEPOST=0.9938;SVTYPE=DEL_ALU	GT	1|1
7	152574795	BI_GS_DEL1_B4_P1391_72	T	<CN0>	100	PASS	AC=777;AF=0.155152;AFR_AF=0.3843;AMR_AF=0.0634;AN=5008;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.1329;END=152580352;EUR_AF=0.0507;MC=YL_CN_ASW_1921,YL_CN_TSI_1725,UW_VH_2515,EM_DL_DEL94041;NS=2504;SAS_AF=0.0409;SVTYPE=DEL	GT	0|1
7	152708457	UW_VH_1490	C	<CN0>	100	PASS	AC=566;AF=0.113019;AFR_AF=0.1195;AMR_AF=0.0807;AN=5008;CIEND=0,545;CIPOS=-390,0;CS=DEL_union;EAS_AF=0.0208;END=152708846;EUR_AF=0.1362;MC=BI_GS_DEL1_B2_P1391_377;NS=2504;SAS_AF=0.1984;SVTYPE=DEL	GT	0|1
7	153310127	DEL_pindel_24444	TAAAACTATAACACTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTATTGTGGCATTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGGTGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAAAGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCACGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAA	T	.	PASS	AC=3248;AF=0.648562;AFR_AF=0.2912;AMR_AF=0.7478;AN=5008;CS=DEL_pindel;EAS_AF=0.8085;END=153310817;EUR_AF=0.7376;NS=2504;SAS_AF=0.8047;SITEPOST=0.9445;SVTYPE=DEL	GT	1|0
7	153529763	DEL_pindel_24448	GGAATGATGGTATACCATGAGAATATGTGGCATAAGGTAGTTAGAGGTTTTGATGTCCTATGTTTAGCAGT	G	.	PASS	AC=845;AF=0.16873;AFR_AF=0.1959;AMR_AF=0.183;AN=5008;CS=DEL_pindel;EAS_AF=0.1399;END=153529833;EUR_AF=0.2028;NS=2504;SAS_AF=0.1166;SITEPOST=1;SVTYPE=DEL	GT	0|1
7	153966050	ALU_umary_ALU_6501	T	<INS:ME:ALU>	.	.	AC=1822;AF=0.363818;AFR_AF=0.2829;AMR_AF=0.4135;AN=5008;CS=ALU_umary;EAS_AF=0.4008;EUR_AF=0.3509;MEINFO=AluYc1,1,272,+;NS=2504;SAS_AF=0.4131;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=AAAAATGCCCATCT	GT	1|0
7	154858220	ALU_umary_ALU_6505	T	<INS:ME:ALU>	.	.	AC=1488;AF=0.297125;AFR_AF=0.1377;AMR_AF=0.3919;AN=5008;CS=ALU_umary;EAS_AF=0.1915;EUR_AF=0.4672;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3793;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GTAACATAAGCTTT	GT	0|1
7	154941915	DEL_pindel_24483	TAAGAAAAGTGGGTGCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAACCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACCCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2840;AF=0.567093;AFR_AF=0.4652;AMR_AF=0.5749;AN=5008;CS=DEL_pindel;EAS_AF=0.6141;END=154942244;EUR_AF=0.6074;MEINFO=AluYb8,1,281,+;NS=2504;SAS_AF=0.6094;SITEPOST=0.9933;SVTYPE=DEL_ALU	GT	0|1
7	155139370	UW_VH_4657	T	<CN0>	100	PASS	AC=2740;AF=0.547125;AFR_AF=0.5598;AMR_AF=0.7219;AN=5008;CIEND=0,202;CIPOS=-143,0;CS=DEL_union;EAS_AF=0.3433;END=155140881;EUR_AF=0.6889;MC=EM_DL_DEL101045033,SI_BD_8383;NS=2504;SAS_AF=0.4703;SVTYPE=DEL	GT	0|1
7	155140316	UW_VH_9614	A	<CN0>	100	PASS	AC=2739;AF=0.546925;AFR_AF=0.559;AMR_AF=0.7219;AN=5008;CIEND=0,182;CIPOS=-199,0;CS=DEL_union;EAS_AF=0.3433;END=155141440;EUR_AF=0.6889;NS=2504;SAS_AF=0.4703;SVTYPE=DEL	GT	0|1
7	155652238	DEL_pindel_24513	TATCTCTGTATCTCTGTCTGCATCTGTATCTGTATCTGCATCTGTATTTGCATCTATCTCTGTATCTGCATCTGCATCTATATCTGTATCC	T	.	PASS	AC=575;AF=0.114816;AFR_AF=0.1989;AMR_AF=0.1081;AN=5008;CS=DEL_pindel;EAS_AF=0.0268;END=155652328;EUR_AF=0.0974;NS=2504;SAS_AF=0.1145;SITEPOST=0.9968;SVTYPE=DEL	GT	0|1
7	157734829	DEL_pindel_24599	GCACAGGGGTCCTCGGCCCACCCTCCACACACAGGGGTCCTCGGCCCACCCTCCACA	G	.	PASS	AC=1993;AF=0.397963;AFR_AF=0.4758;AMR_AF=0.3919;AN=5008;CS=DEL_pindel;EAS_AF=0.4395;END=157734885;EUR_AF=0.329;NS=2504;SAS_AF=0.3252;SITEPOST=0.99275;SVTYPE=DEL	GT	1|0
7	157825833	DEL_pindel_24607	AGTGGCCACCAAGCCTGACAGAGCCATTGGGGGCCACGAATAAAGCCTTGGTGCCTGGTG	A	.	PASS	AC=1296;AF=0.258786;AFR_AF=0.3253;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.2212;END=157825892;EUR_AF=0.2058;NS=2504;SAS_AF=0.2249;SITEPOST=0.9993;SVTYPE=DEL	GT	1|0
7	158029473	BI_GS_DEL1_B1_P1397_25	A	<CN0>	100	PASS	AC=4046;AF=0.807907;AFR_AF=0.8759;AMR_AF=0.7939;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7679;END=158030453;EUR_AF=0.7545;MC=DEL_pindel_24625;NS=2504;SAS_AF=0.8221;SVTYPE=DEL	GT	0|1
7	158046568	SI_BD_8455	C	<CN0>	100	PASS	AC=3221;AF=0.643171;AFR_AF=0.7216;AMR_AF=0.5663;AN=5008;CIEND=-50,194;CIPOS=-194,57;CS=DEL_union;EAS_AF=0.6319;END=158047317;EUR_AF=0.6421;MC=BI_GS_DEL1_B1_P1397_41;NS=2504;SAS_AF=0.6043;SVTYPE=DEL	GT	1|1
7	158500754	YL_CN_GBR_1789	A	<CN0>	100	PASS	AC=751;AF=0.14996;AFR_AF=0.2867;AMR_AF=0.0692;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1488;END=158504852;EUR_AF=0.1014;MC=BI_GS_DEL1_B1_P1397_411,UW_VH_21158,UW_VH_10062,UW_VH_4139,SI_BD_8471,UW_VH_4477,UW_VH_17315;NS=2504;SAS_AF=0.0736;SVTYPE=DEL	GT	0|1
8	594395	UW_VH_25421	A	<CN0>	100	PASS	AC=3261;AF=0.651158;AFR_AF=0.4856;AMR_AF=0.6167;AN=5008;CIEND=0,373;CIPOS=-346,0;CS=DEL_union;EAS_AF=0.5883;END=599417;EUR_AF=0.8241;MC=UW_VH_11724,UW_VH_694,UW_VH_9015,UW_VH_10875,UW_VH_20418,YL_CN_ASW_1939,UW_VH_6851,BI_GS_DEL1_B1_P1399_346,EM_DL_DEL94462,UW_VH_13253,UW_VH_3236,UW_VH_14473,UW_VH_4435,UW_VH_10961,UW_VH_11379,UW_VH_18019,UW_VH_11035,YL_CN_FIN_1768,UW_VH_8420;NS=2504;SAS_AF=0.7863;SVTYPE=DEL	GT	1|1
8	597104	BI_GS_DEL1_B2_P1399_303	G	<CN0>	100	PASS	AC=3309;AF=0.660743;AFR_AF=0.5219;AMR_AF=0.6167;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.5883;END=598344;EUR_AF=0.8241;MC=UW_VH_14828,SI_BD_8508,YL_CN_GWD_2570;NS=2504;SAS_AF=0.7863;SVTYPE=DEL	GT	1|1
8	1071684	DEL_pindel_24660	CTCATCTTTCCTGAACCCATGACCACCCATCCTTGTCCCTTTAGAACCCACAACCACCCGTCT	C	.	PASS	AC=591;AF=0.118011;AFR_AF=0.0514;AMR_AF=0.1484;AN=5008;CS=DEL_pindel;EAS_AF=0.0655;END=1071746;EUR_AF=0.2207;NS=2504;SAS_AF=0.135;SITEPOST=0.9979;SVTYPE=DEL	GT	0|1
8	1836099	YL_CN_ESN_1943	C	<CN0>	100	PASS	AC=2229;AF=0.445088;AFR_AF=0.4584;AMR_AF=0.3127;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4683;END=1838287;EUR_AF=0.3469;MC=UW_VH_3666,BI_GS_DEL1_B5_P1400_846,UW_VH_16467,YL_CN_GWD_2587,UW_VH_12980,UW_VH_16351;NS=2504;SAS_AF=0.5982;SVTYPE=DEL	GT	1|0
8	2122088	BI_GS_DEL1_B5_P1401_148	A	<CN0>	100	PASS	AC=3456;AF=0.690096;AFR_AF=0.6165;AMR_AF=0.5101;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8284;END=2122354;EUR_AF=0.6372;MC=UW_VH_1805,DEL_pindel_24692;NS=2504;SAS_AF=0.8292;SVTYPE=DEL	GT	1|0
8	2132773	DUP_uwash_chr8_2132773_2270819	A	<CN2>,<CN3>	.	PASS	AC=4996,12;AF=0.997604,0.00239617;AFR_AF=1,0;AMR_AF=1,0;AN=5008;CS=DUP_uwash;EAS_AF=0.9921,0.0079;END=2270819;EUR_AF=1,0;NS=2504;SAS_AF=0.9959,0.0041;SITEPOST=1;SVTYPE=CNV	GT	1|1
8	2250563	UW_VH_12858	T	<CN0>	100	PASS	AC=673;AF=0.134385;AFR_AF=0.3578;AMR_AF=0.0778;AN=5008;CIEND=0,75;CIPOS=-46,0;CS=DEL_union;EAS_AF=0.001;END=2266528;EUR_AF=0.0726;NS=2504;SAS_AF=0.0736;SVTYPE=DEL	GT	1|0
8	2778563	DEL_pindel_24710	GGTTGCAGTGAGCCAAGATCACACCACTGTACTCCAGCCTGGCCGACAGAGGAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCGACAAAATTGGAACAAAAATTTTTAGTGGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCTGAGGTGGGAGGATCCCTTGAGACCAGGAGTTTGAAACCAGCCTGGGCAAAAAAATGAGACCAT	G	.	PASS	AC=1524;AF=0.304313;AFR_AF=0.2595;AMR_AF=0.3156;AN=5008;CS=DEL_pindel;EAS_AF=0.249;END=2778787;EUR_AF=0.2972;NS=2504;SAS_AF=0.4213;SITEPOST=0.9992;SVTYPE=DEL	GT	1|1
8	3994862	BI_GS_DEL1_B2_P1402_674	A	<CN0>	100	PASS	AC=1156;AF=0.230831;AFR_AF=0.0325;AMR_AF=0.3314;AN=5008;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.1319;END=3995320;EUR_AF=0.4095;NS=2504;SAS_AF=0.3456;SVTYPE=DEL	GT	1|0
8	4122887	UW_VH_14451	C	<CN0>	100	PASS	AC=2141;AF=0.427516;AFR_AF=0.1399;AMR_AF=0.4669;AN=5008;CIEND=0,404;CIPOS=-419,0;CS=DEL_union;EAS_AF=0.4236;END=4124965;EUR_AF=0.6223;MC=UW_VH_14520,UW_VH_696,YL_CN_PEL_1677,YL_CN_LWK_1826,UW_VH_4660,UW_VH_18163,YL_CN_CHS_1891,UW_VH_6145,UW_VH_3650,YL_CN_FIN_1792,YL_CN_ACB_2162,BI_GS_DEL1_B1_P1403_111,YL_CN_JPT_2049,UW_VH_18756,YL_CN_MXL_1592,UW_VH_6523,SI_BD_8595,YL_CN_YRI_2405,YL_CN_CDX_1582;NS=2504;SAS_AF=0.592;SVTYPE=DEL	GT	1|1
8	4222049	DEL_pindel_24785	TAAAAAGATAATCAATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGCGCGACAGAGCGAGACTCCTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2979;AF=0.594848;AFR_AF=0.7103;AMR_AF=0.5231;AN=5008;CS=DEL_pindel;EAS_AF=0.6151;END=4222389;EUR_AF=0.5487;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5164;SITEPOST=0.9862;SVTYPE=DEL_ALU	GT	0|1
8	4941223	DEL_pindel_24814	TAAGATGGAAGTACACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2326;AF=0.464457;AFR_AF=0.5008;AMR_AF=0.4769;AN=5008;CS=DEL_pindel;EAS_AF=0.5367;END=4941520;EUR_AF=0.4056;MEINFO=AluY,35,281,+;NS=2504;SAS_AF=0.3926;SITEPOST=0.999;SVTYPE=DEL_ALU	GT	1|0
8	5748176	DEL_pindel_24832	TAAAAATGGAGAGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1690;AF=0.33746;AFR_AF=0.2352;AMR_AF=0.3732;AN=5008;CS=DEL_pindel;EAS_AF=0.4732;END=5748505;EUR_AF=0.3738;MEINFO=AluYb3a1,1,281,+;NS=2504;SAS_AF=0.273;SITEPOST=0.9987;SVTYPE=DEL_ALU	GT	0|1
8	5829282	L1_umary_LINE1_1626	T	<INS:ME:LINE1>	.	.	AC=2524;AF=0.503994;AFR_AF=0.2738;AMR_AF=0.6037;AN=5008;CS=L1_umary;EAS_AF=0.7143;EUR_AF=0.5944;MEINFO=LINE1,5441,6011,-;NS=2504;SAS_AF=0.4346;SITEPOST=1;SVLEN=570;SVTYPE=LINE1;TSD=GTTTTCT	GT	0|1
8	6587829	DEL_pindel_24861	AATCATAGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGTTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=3254;AF=0.64976;AFR_AF=0.8003;AMR_AF=0.6427;AN=5008;CS=DEL_pindel;EAS_AF=0.6319;END=6588150;EUR_AF=0.5934;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.5276;SITEPOST=0.9908;SVTYPE=DEL_ALU	GT	1|0
8	6991759	DUP_gs_CNV_8_6991759_6995386	C	<CN0>,<CN2>	.	PASS	AC=1308,13;AF=0.261182,0.00259585;AFR_AF=0.1301,0.0038;AMR_AF=0.2695,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.3978,0.001;END=6995386;EUR_AF=0.2515,0.002;MC=YL_CN_CLM_1618,UW_VH_1807,BI_GS_DEL1_B1_P1405_887,SI_BD_8631,YL_CN_GIH_1489;NS=2504;SAS_AF=0.3016,0.002;SITEPOST=1;SVTYPE=CNV	GT	0|1
8	7212582	DUP_gs_CNV_8_7212582_7227421	G	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=293,1489,35,28;AF=0.0585064,0.297324,0.00698882,0.00559105;AFR_AF=0.1815,0.1218,0.003,0.0023;AMR_AF=0.0101,0.4207,0.0216,0.0173;AN=5008;CS=DUP_gs;EAS_AF=0.0139,0.2609,0.003,0.0069;END=7227421;EUR_AF=0.008,0.4414,0.006,0.003;NS=2504;SAS_AF=0.0245,0.3364,0.0072,0.0031;SITEPOST=0.9999;SVTYPE=CNV	GT	2|2
8	7355293	BI_GS_DEL1_B1_P1406_29	T	<CN0>	100	PASS	AC=4491;AF=0.896765;AFR_AF=0.7723;AMR_AF=0.9323;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9722;END=7364762;EUR_AF=0.9414;MC=YL_CN_PUR_2321;NS=2504;SAS_AF=0.9162;SVTYPE=DEL	GT	1|1
8	7774146	DUP_gs_CNV_8_7774146_7782327	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=1821,687,389,40;AF=0.363618,0.137181,0.0776757,0.00798722;AFR_AF=0.1089,0.2292,0.2163,0.0136;AMR_AF=0.5245,0.0634,0.0288,0.0058;AN=5008;CS=DUP_gs;EAS_AF=0.369,0.1131,0.0397,0.0069;END=7782327;EUR_AF=0.492,0.1064,0.0239,0.007;NS=2504;SAS_AF=0.456,0.1217,0.0194,0.0041;SITEPOST=0.99415;SVTYPE=CNV	GT	1|1
8	8072609	DUP_gs_CNV_8_8072609_8077628	C	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=2200,400,85,26;AF=0.439297,0.0798722,0.0169728,0.00519169;AFR_AF=0.1218,0.2511,0.0582,0.0189;AMR_AF=0.5274,0.0202,0.0014,0;AN=5008;CS=DUP_gs;EAS_AF=0.7321,0.0179,0.001,0.001;END=8077628;EUR_AF=0.4354,0.0119,0.005,0;NS=2504;SAS_AF=0.5082,0.0245,0.001,0;SITEPOST=1;SVTYPE=CNV	GT	1|0
8	8245067	DEL_pindel_24896	TGAGAGGAGGAAGATGGGCCCCCACCCCCACCCCCAGATCCCTGGCTCTCCTCTTTGCTGCTGTGGGTGTGGACAGA	T	.	PASS	AC=2087;AF=0.416733;AFR_AF=0.3192;AMR_AF=0.415;AN=5008;CS=DEL_pindel;EAS_AF=0.5913;END=8245143;EUR_AF=0.2823;NS=2504;SAS_AF=0.5082;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
8	8920127	ALU_umary_ALU_6560	G	<INS:ME:ALU>	.	.	AC=1692;AF=0.337859;AFR_AF=0.0772;AMR_AF=0.4236;AN=5008;CS=ALU_umary;EAS_AF=0.5119;EUR_AF=0.3678;MEINFO=AluUndef,3,281,+;NS=2504;SAS_AF=0.4192;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAGAAGGGGACGG	GT	0|1
8	9665673	ALU_umary_ALU_6564	C	<INS:ME:ALU>	.	.	AC=1962;AF=0.391773;AFR_AF=0.3116;AMR_AF=0.3559;AN=5008;CS=ALU_umary;EAS_AF=0.3661;EUR_AF=0.4781;MEINFO=AluYb7_2,1,279,+;NS=2504;SAS_AF=0.4632;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AGAAGATCTTCACTGGC	GT	0|1
8	9807901	ALU_umary_ALU_6565	G	<INS:ME:ALU>	.	.	AC=3024;AF=0.603834;AFR_AF=0.5174;AMR_AF=0.5951;AN=5008;CS=ALU_umary;EAS_AF=0.623;EUR_AF=0.6272;MEINFO=AluYb8,1,281,+;NS=2504;SAS_AF=0.683;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGAGTCTG	GT	1|1
8	11245530	UW_VH_15223	T	<CN0>	100	PASS	AC=1869;AF=0.373203;AFR_AF=0.7466;AMR_AF=0.2867;AN=5008;CIEND=0,544;CIPOS=-448,0;CS=DEL_union;EAS_AF=0.0208;END=11247217;EUR_AF=0.3887;MC=YL_CN_PJL_2034,SI_BD_8663,YL_CN_ITU_1949,UW_VH_3736,YL_CN_LWK_1877,YL_CN_ASW_2004,YL_CN_MSL_1831,BI_GS_DEL1_B4_P1410_61,UW_VH_1986,YL_CN_ESN_2020,UW_VH_4286,EM_DL_DEL101055145,YL_CN_PUR_2356,UW_VH_4694,UW_VH_18685;NS=2504;SAS_AF=0.2771;SVTYPE=DEL	GT	1|0
8	12389850	DUP_gs_CNV_8_12389850_12428478	T	<CN2>,<CN3>,<CN4>,<CN5>,<CN6>,<CN7>	.	PASS	AC=291,2392,1726,61,45,12;AF=0.058107,0.477636,0.344649,0.0121805,0.00898562,0.00239617;AFR_AF=0.0129,0.4107,0.385,0.0272,0.0242,0.0045;AMR_AF=0.0533,0.5303,0.3098,0.0072,0.0043,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.1498,0.4206,0.3353,0.0069,0.005,0.004;END=12428478;EUR_AF=0.0258,0.5676,0.3231,0.0089,0.003,0;NS=2504;SAS_AF=0.0613,0.4969,0.3466,0.0041,0.002,0;SITEPOST=0.98045;SVTYPE=CNV	GT	2|2
8	13594464	DEL_pindel_25036	TGACTTCATTCTTTTTCTTTTTTTTTTTTTTTTTTATTTTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3400;AF=0.678914;AFR_AF=0.6415;AMR_AF=0.683;AN=5008;CS=DEL_pindel;EAS_AF=0.6974;END=13594628;EUR_AF=0.7048;MEINFO=AluYb,1,132,-;NS=2504;SAS_AF=0.681;SITEPOST=0.9684;SVTYPE=DEL_ALU	GT	1|0
8	13778059	DEL_pindel_25043	TAAAGAAATTGGACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4130;AF=0.824681;AFR_AF=0.7958;AMR_AF=0.817;AN=5008;CS=DEL_pindel;EAS_AF=0.8591;END=13778385;EUR_AF=0.841;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.817;SITEPOST=0.9757;SVTYPE=DEL_ALU	GT	1|1
8	15001266	DEL_pindel_25062	TCTATTATTACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=4059;AF=0.810503;AFR_AF=0.73;AMR_AF=0.8444;AN=5008;CS=DEL_pindel;EAS_AF=0.8373;END=15001586;EUR_AF=0.8459;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.8313;SITEPOST=0.97405;SVTYPE=DEL_ALU	GT	1|1
8	15053390	DEL_pindel_25063	TAGGCTTCGATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=207;AF=0.0413339;AFR_AF=0.0613;AMR_AF=0.0519;AN=5008;CS=DEL_pindel;EAS_AF=0.003;END=15053705;EUR_AF=0.0437;MEINFO=AluYc2,1,281,-;NS=2504;SAS_AF=0.044;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|0
8	15387290	DEL_pindel_25068	TGAAAAAGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAATGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=335;AF=0.066893;AFR_AF=0.1256;AMR_AF=0.036;AN=5008;CS=DEL_pindel;EAS_AF=0.0952;END=15387593;EUR_AF=0.0318;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.0164;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|0
8	15401664	BI_GS_CNV_8_15401664_15414791	G	<CN0>	100	PASS	AC=134;AF=0.0267572;AFR_AF=0.0008;AMR_AF=0.0231;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.0694;END=15414791;EUR_AF=0.0249;MC=UW_VH_10393,EM_DL_DEL95146;NS=2504;SAS_AF=0.0225;SVTYPE=DEL	GT	1|0
8	16102822	ALU_umary_ALU_6598	T	<INS:ME:ALU>	.	.	AC=2394;AF=0.478035;AFR_AF=0.2564;AMR_AF=0.5432;AN=5008;CS=ALU_umary;EAS_AF=0.5288;EUR_AF=0.6044;MEINFO=AluYa5,28,281,-;NS=2504;SAS_AF=0.5491;SITEPOST=1;SVLEN=253;SVTYPE=ALU;TSD=CATATTATGGATTCTT	GT	0|1
8	16821865	BI_GS_DEL1_B3_P1415_28	G	<CN0>	100	PASS	AC=1682;AF=0.335863;AFR_AF=0.2239;AMR_AF=0.3948;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4435;END=16822240;EUR_AF=0.2903;MC=DEL_pindel_25098;NS=2504;SAS_AF=0.3814;SVTYPE=DEL	GT	0|1
8	16984984	DEL_pindel_25104	TTAAAGCACAGCCAAATGTCAGCCTTCATTTGTCAACTTAAATATGTTTTTTCTAAAATTTA	T	.	PASS	AC=2617;AF=0.522564;AFR_AF=0.6392;AMR_AF=0.4582;AN=5008;CS=DEL_pindel;EAS_AF=0.4435;END=16985045;EUR_AF=0.4751;NS=2504;SAS_AF=0.5409;SITEPOST=0.9999;SVTYPE=DEL	GT	1|1
8	23447840	DEL_pindel_25272	ATATATATATATATATATATATATATATATATATATATATATATATATATG	A	.	PASS	AC=3432;AF=0.685304;AFR_AF=0.6755;AMR_AF=0.7291;AN=5008;CS=DEL_pindel;EAS_AF=0.7212;END=23447890;EUR_AF=0.672;NS=2504;SAS_AF=0.6442;SITEPOST=0.91965;SVTYPE=DEL	GT	1|1
8	24972437	UW_VH_2559	C	<CN0>	100	PASS	AC=1089;AF=0.217452;AFR_AF=0.121;AMR_AF=0.2147;AN=5008;CIEND=0,503;CIPOS=-465,0;CS=DEL_union;EAS_AF=0.2222;END=24990950;EUR_AF=0.3499;MC=EM_DL_DEL95398,UW_VH_5276,BI_GS_DEL1_B1_P1423_852,YL_CN_GBR_1902,UW_VH_12784,UW_VH_8118,SI_BD_8763;NS=2504;SAS_AF=0.2086;SVTYPE=DEL	GT	0|1
8	25066682	BI_GS_DEL1_B1_P1424_53	T	<CN0>	100	PASS	AC=3041;AF=0.607228;AFR_AF=0.4032;AMR_AF=0.719;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5903;END=25070659;EUR_AF=0.836;MC=UW_VH_7161,UW_VH_7833,UW_VH_25179,UW_VH_11504,UW_VH_21243,UW_VH_2663,EM_DL_DEL95403,UW_VH_13844,UW_VH_4824,UW_VH_11380,UW_VH_3146,UW_VH_18676,SI_BD_8766,UW_VH_19120,UW_VH_14669,YL_CN_BEB_1687,UW_VH_20814,UW_VH_13556;NS=2504;SAS_AF=0.5859;SVTYPE=DEL	GT	1|1
8	25172660	ALU_umary_ALU_6639	T	<INS:ME:ALU>	.	.	AC=2417;AF=0.482628;AFR_AF=0.3555;AMR_AF=0.5677;AN=5008;CS=ALU_umary;EAS_AF=0.5288;EUR_AF=0.5736;MEINFO=AluYa5,1,280,-;NS=2504;SAS_AF=0.453;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=ATATTAAAATTCTT	GT	1|1
8	25327221	DEL_pindel_25307	GATACACTTTATGAGATAAAGTGTACACTTTTCTCAGGATAAAGTATCTCCTGTACAC	G	.	PASS	AC=4795;AF=0.957468;AFR_AF=0.8495;AMR_AF=0.9957;AN=5008;CS=DEL_pindel;EAS_AF=1;END=25327278;EUR_AF=0.999;NS=2504;SAS_AF=0.9898;SITEPOST=1;SVTYPE=DEL	GT	1|1
8	26073403	ALU_umary_ALU_6642	T	<INS:ME:ALU>	.	.	AC=1625;AF=0.324481;AFR_AF=0.2474;AMR_AF=0.3357;AN=5008;CS=ALU_umary;EAS_AF=0.3839;EUR_AF=0.3062;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3783;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CAAATCCCCATCATCTT	GT	0|1
8	30392277	DEL_pindel_25400	TAAAACTGATAACTACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4073;AF=0.813299;AFR_AF=0.8116;AMR_AF=0.8141;AN=5008;CS=DEL_pindel;EAS_AF=0.8115;END=30392581;EUR_AF=0.8032;MEINFO=AluYb6_2,36,281,+;NS=2504;SAS_AF=0.8272;SITEPOST=0.9751;SVTYPE=DEL_ALU	GT	0|1
8	31571241	DEL_pindel_25416	ATTCTCTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	A	.	PASS	AC=3588;AF=0.716454;AFR_AF=0.6861;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.6994;END=31571594;EUR_AF=0.7326;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7434;SITEPOST=0.9494;SVTYPE=DEL_ALU	GT	0|1
8	32679960	SI_BD_8809	C	<CN0>	100	PASS	AC=4699;AF=0.938299;AFR_AF=0.77;AMR_AF=0.9928;AN=5008;CIEND=-50,322;CIPOS=-322,95;CS=DEL_union;EAS_AF=1;END=32691259;EUR_AF=1;MC=UW_VH_21244,YL_CN_ACB_2283,UW_VH_1341,UW_VH_14715;NS=2504;SAS_AF=1;SVTYPE=DEL	GT	1|1
8	34022524	DEL_pindel_25477	CTATTCTTTGTGTATGATACTGATGTGGACACTGAAATATAAATAGTGCATAAACACCTTTCTCTCCCCTTTAATTCATGGTTAGTAACATACTTTGAATTCCATAAGTCTTGTCATTAGTTAAATTATAGTGTATTCATGTATTTAAAGTCAAAGACTTTTAAGTCCACAATTTTTCATTTATACATCCCATTTACAAAATGTGAATCCTAAACTTCATGATATTTTAGGACATGGCCACGTTTAAAGTTCTATGACAATAAATATGTGGCTGGGAGTCAA	C	.	PASS	AC=538;AF=0.107428;AFR_AF=0.2103;AMR_AF=0.1412;AN=5008;CS=DEL_pindel;EAS_AF=0.0228;END=34022805;EUR_AF=0.0944;NS=2504;SAS_AF=0.045;SITEPOST=0.9992;SVTYPE=DEL	GT	0|1
8	34166427	DEL_pindel_25485	TATGTTCACAGTGGCATTATTCACAATAGCCAGGATATGGGAACAACTTAAATACCCATCAGTGAATAA	T	.	PASS	AC=1116;AF=0.222843;AFR_AF=0.2602;AMR_AF=0.1427;AN=5008;CS=DEL_pindel;EAS_AF=0.2391;END=34166495;EUR_AF=0.1421;NS=2504;SAS_AF=0.2955;SITEPOST=1;SVTYPE=DEL	GT	0|1
8	34947383	DEL_pindel_25508	AATATATATATACACGTATATATATATACACGTATATATATATATACACGTATATATATACATACACGTATATAT	A	.	PASS	AC=2148;AF=0.428914;AFR_AF=0.4614;AMR_AF=0.4308;AN=5008;CS=DEL_pindel;EAS_AF=0.4296;END=34947457;EUR_AF=0.4294;NS=2504;SAS_AF=0.3824;SITEPOST=0.99095;SVTYPE=DEL	GT	0|1
8	37050879	DEL_pindel_25540	TGATTTTTGTAGGGGTGGGTTGCCCCTACACACCTGTGGGTGTTTCTCGTAAGGTGGGACGAGAGATTTGGAAAAGAAAAAGACACAGAGACAAAGTATAGAGAAAGAAATAAGGGGACCCGGGGAACCAGCGTTCAGCATATGGAGGATCCCGCCAGCCTCTGAGTTCCCTTAGTATTTATTGATCATCTGTGGGTGTTTCTCAAAGAGGGGGATGTGTCAGGGTCACAAGACAATTGTGGGGAGAGGGTCAGCAGACAAACACGTGAACAAAGGTCTTGGCATCATAGACAATGTAAAGGATTAAGTGCTGTGCTTTTAGATATGCATACACATAAACATCTCAGTGCTTTACAAAGCAGTATTGCTGCCCGCAGGTCCCACCTCCAGCCCTAAGGCGGTTTTTCCCTATCTCAGTAGATGGAGCATACAATCGGGTTTTATACCGAGACATTCCATTGCCCAGGGACAGGCAGGAGACAGATGCCTTCCTCTTGTCTCAACTGCAAGAGGCATTCCTTCCTCTTTTACTAATCCTCCTCAGCACAGACCCTTTACGGGTGTCGGGCTGGGGGACGGTCAGGTCTTTCCCTTCCCACGAGGCCATATTTCAGACTATCACATGGGGAGAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCGGCCTTCCGCAGTTTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCCTGCACCGCCCTTAATCCATTCAACTCTGAGTTGACACAGCACACGTTTCAGAGAGCACGGGGTTGGGGGTAAGGTCATAGATTAACAGAATCTCAAGGCAGAAGAATTTTTCTTAGTACATAACAAAATGGAGTCTCCTATGTCTACTTCTTTCTACACAGACACAGTAACAATCTGATCTCTCTTGCTTTTCCCCACA	T	.	PASS	AC=3665;AF=0.731829;AFR_AF=0.6611;AMR_AF=0.7968;AN=5008;CS=DEL_pindel;EAS_AF=0.7351;END=37051853;EUR_AF=0.8111;NS=2504;SAS_AF=0.6963;SITEPOST=0.99825;SVTYPE=DEL	GT	1|1
8	38864077	ALU_umary_ALU_6685	C	<INS:ME:ALU>	.	.	AC=1813;AF=0.362021;AFR_AF=0.2375;AMR_AF=0.4078;AN=5008;CS=ALU_umary;EAS_AF=0.5407;EUR_AF=0.3787;MEINFO=AluYa1_1,1,280,+;NS=2504;SAS_AF=0.2965;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAAGGTATCATAGTC	GT	1|0
8	39195825	DUP_uwash_chr8_39195825_39389230	T	<CN0>	.	PASS	AC=1332;AF=0.265974;AFR_AF=0.0923;AMR_AF=0.4121;AN=5008;CS=DUP_uwash;EAS_AF=0.1488;END=39389230;EUR_AF=0.4284;NS=2504;SAS_AF=0.3507;SITEPOST=1;SVTYPE=DEL	GT	1|0
8	39232005	BI_GS_CNV_8_39232005_39287823	A	<CN0>	100	PASS	AC=1333;AF=0.266174;AFR_AF=0.0923;AMR_AF=0.4135;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.1488;END=39287823;EUR_AF=0.4284;MC=BI_GS_DEL2_B1_P0290_1,YL_CN_ACB_2289,UW_VH_8301,SI_BD_8855;NS=2504;SAS_AF=0.3507;SVTYPE=DEL	GT	1|0
8	39303973	BI_GS_DEL1_B5_P1438_306	G	<CN0>	100	PASS	AC=1336;AF=0.266773;AFR_AF=0.093;AMR_AF=0.415;AN=5008;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.1488;END=39308306;EUR_AF=0.4294;MC=UW_VH_24012,EM_DL_DEL95760;NS=2504;SAS_AF=0.3507;SVTYPE=DEL	GT	1|0
8	39306887	BI_GS_DEL1_B2_P1438_218	C	<CN0>	100	PASS	AC=1335;AF=0.266573;AFR_AF=0.0923;AMR_AF=0.4135;AN=5008;CIEND=-16,16;CIPOS=-16,16;CS=DEL_union;EAS_AF=0.1498;END=39312031;EUR_AF=0.4294;NS=2504;SAS_AF=0.3507;SVTYPE=DEL	GT	1|0
8	39311276	YL_CN_LWK_1922	T	<CN0>	100	PASS	AC=1334;AF=0.266374;AFR_AF=0.093;AMR_AF=0.4135;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1488;END=39321581;EUR_AF=0.4284;NS=2504;SAS_AF=0.3507;SVTYPE=DEL	GT	1|0
8	39737280	DEL_pindel_25609	ACTACCTGTCAGATGGTCTGGAGGAAATTTGGCCCTGTAAATAGGGATTTGGCCACTTGATGAGTGTTTTCAATACCCATATGAAAAGTTTGGTGGAGGGTTTTAAGTATTTTCCACTGGCTGTCTTTGGGTATAAGTACCTTTCCTTCTTCTGTCATTAACCACCCTGAGGGGAGAAAACTATGCCCCCGCGAAAGTTCCCATTCTGTTTCAGTTGGGGAATACTGGGGC	A	.	PASS	AC=616;AF=0.123003;AFR_AF=0.0287;AMR_AF=0.196;AN=5008;CS=DEL_pindel;EAS_AF=0.1508;END=39737510;EUR_AF=0.174;NS=2504;SAS_AF=0.1176;SITEPOST=0.99705;SVTYPE=DEL	GT	1|0
8	39765314	DEL_pindel_25611	TAAGAAATAATATTTAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGAACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTAGTGGCGCGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCAGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2138;AF=0.426917;AFR_AF=0.5605;AMR_AF=0.4121;AN=5008;CS=DEL_pindel;EAS_AF=0.4087;END=39765646;EUR_AF=0.4344;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2679;SITEPOST=0.9919;SVTYPE=DEL_ALU	GT	0|1
8	39976061	DEL_pindel_25617	CCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACACCCGGCCAATACTTTCTTAACTATAGTCTGTGTGGCTTA	C	.	PASS	AC=2841;AF=0.567292;AFR_AF=0.4175;AMR_AF=0.6023;AN=5008;CS=DEL_pindel;EAS_AF=0.5645;END=39976151;EUR_AF=0.5765;NS=2504;SAS_AF=0.7382;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
8	40469706	BI_GS_DEL1_B5_P1439_593	A	<CN0>	100	PASS	AC=790;AF=0.157748;AFR_AF=0.0734;AMR_AF=0.2277;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.003;END=40470386;EUR_AF=0.3479;MC=BI_GS_DEL1_B5_P1439_594,UW_VH_2313;NS=2504;SAS_AF=0.1861;SVTYPE=DEL	GT	1|0
8	40774597	SI_BD_8864	A	<CN0>	100	PASS	AC=2346;AF=0.46845;AFR_AF=0.4039;AMR_AF=0.5432;AN=5008;CIEND=-50,266;CIPOS=-266,87;CS=DEL_union;EAS_AF=0.498;END=40779782;EUR_AF=0.5656;MC=UW_VH_11737,UW_VH_4355,UW_VH_3507,UW_VH_4887,YL_CN_CHB_2020,UW_VH_21953,UW_VH_15399,UW_VH_17441,BI_GS_DEL1_B1_P1439_734,EM_DL_DEL95791,UW_VH_708,UW_VH_7248;NS=2504;SAS_AF=0.3722;SVTYPE=DEL	GT	1|1
8	41270468	ALU_umary_ALU_6696	T	<INS:ME:ALU>	.	.	AC=2362;AF=0.471645;AFR_AF=0.2769;AMR_AF=0.366;AN=5008;CS=ALU_umary;EAS_AF=0.6756;EUR_AF=0.497;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.5736;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GACACATTTT	GT	1|1
8	41279328	DEL_pindel_25648	TAGATTAACCTTAAAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAAGCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3114;AF=0.621805;AFR_AF=0.5908;AMR_AF=0.6023;AN=5008;CS=DEL_pindel;EAS_AF=0.6944;END=41279651;EUR_AF=0.5835;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.6421;SITEPOST=0.9672;SVTYPE=DEL_ALU	GT	1|0
8	42190387	EM_DL_DEL95835	A	<CN0>	100	PASS	AC=3326;AF=0.664137;AFR_AF=0.2277;AMR_AF=0.8617;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.8343;END=42194352;EUR_AF=0.8738;MC=UW_VH_4634,SI_BD_8875,YL_CN_GWD_2754,UW_VH_710,UW_VH_7431,UW_VH_5170,UW_VH_20989;NS=2504;SAS_AF=0.7229;SVTYPE=DEL	GT	1|1
8	46991405	YL_CN_CLM_1731	C	<CN0>	100	PASS	AC=2147;AF=0.428714;AFR_AF=0.0749;AMR_AF=0.5245;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.6002;END=46992654;EUR_AF=0.675;NS=2504;SAS_AF=0.409;SVTYPE=DEL	GT	0|1
8	46991586	BI_GS_DEL1_B4_P1445_36	T	<CN0>	100	PASS	AC=2140;AF=0.427316;AFR_AF=0.0719;AMR_AF=0.5245;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5982;END=46992440;EUR_AF=0.674;MC=EM_DL_DEL101068058;NS=2504;SAS_AF=0.409;SVTYPE=DEL	GT	0|1
8	47405849	BI_GS_DEL1_B4_P1446_76	G	<CN0>	100	PASS	AC=2081;AF=0.415535;AFR_AF=0.0673;AMR_AF=0.5231;AN=5008;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.6171;END=47407908;EUR_AF=0.669;MC=YL_CN_CHB_2034,EM_DL_DEL96363,YL_CN_ASW_2061;NS=2504;SAS_AF=0.3415;SVTYPE=DEL	GT	0|1
8	49045494	ALU_umary_ALU_6708	T	<INS:ME:ALU>	.	.	AC=1214;AF=0.242412;AFR_AF=0.4047;AMR_AF=0.1931;AN=5008;CS=ALU_umary;EAS_AF=0.25;EUR_AF=0.0736;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0.2239;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=TTTAATAAAGTTTT	GT	1|0
8	52737961	DEL_pindel_25786	TAAGATATTTATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1696;AF=0.338658;AFR_AF=0.0673;AMR_AF=0.4308;AN=5008;CS=DEL_pindel;EAS_AF=0.3869;END=52738284;EUR_AF=0.4702;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.455;SITEPOST=0.986;SVTYPE=DEL_ALU	GT	0|1
8	53895704	BI_GS_DEL1_B4_P1452_190	G	<CN0>	100	PASS	AC=70;AF=0.0139776;AFR_AF=0.0015;AMR_AF=0.0303;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.004;END=53897189;EUR_AF=0.0149;MC=YL_CN_PEL_1801,SI_BD_8932,UW_VH_4332,EM_DL_DEL101070464;NS=2504;SAS_AF=0.0286;SVTYPE=DEL	GT	1|0
8	54204882	DEL_pindel_25808	TAGAAAAGCAAAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAGAAAA	T	.	PASS	AC=1604;AF=0.320288;AFR_AF=0.4758;AMR_AF=0.2896;AN=5008;CS=DEL_pindel;EAS_AF=0.2302;END=54205198;EUR_AF=0.1889;MEINFO=AluYg,1,281,+;NS=2504;SAS_AF=0.3599;SITEPOST=0.9996;SVTYPE=DEL_ALU	GT	1|0
8	56401202	DEL_pindel_25859	TAAAAAGACCAATGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTTTCAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2769;AF=0.552915;AFR_AF=0.6263;AMR_AF=0.5476;AN=5008;CS=DEL_pindel;EAS_AF=0.5;END=56401518;EUR_AF=0.5447;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5204;SITEPOST=0.9929;SVTYPE=DEL_ALU	GT	1|0
8	56658598	DEL_pindel_25862	GTGCGGTGGCTTGTGCCTGTAATCCCAGCACTTTGGGAGGCCAAGACAGGTGGATCACTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACATGGCAAAACCCTGTCTCTACAAAAAAATGTAAAAATTATCCAGT	G	.	PASS	AC=2428;AF=0.484824;AFR_AF=0.4372;AMR_AF=0.5187;AN=5008;CS=DEL_pindel;EAS_AF=0.502;END=56658734;EUR_AF=0.5209;NS=2504;SAS_AF=0.4703;SITEPOST=0.98615;SVTYPE=DEL	GT	1|1
8	56676277	DEL_pindel_25863	ATCAATATCTACCTAATTCAGTAAAAGTAACCCAATTCTTTACGAAATGATTACATACATTAATGGATATTGTTTTTTTATAGAGAAACAGATTTACAAAAGTTCATTATGCAATAAAAATTTATCAGTAC	A	.	PASS	AC=4308;AF=0.860224;AFR_AF=0.739;AMR_AF=0.8732;AN=5008;CS=DEL_pindel;EAS_AF=0.9891;END=56676407;EUR_AF=0.8897;NS=2504;SAS_AF=0.8517;SITEPOST=1;SVTYPE=DEL	GT	1|1
8	59078452	DEL_pindel_25893	TAGAAATTCTGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCATGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3676;AF=0.734026;AFR_AF=0.8238;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.7768;END=59078788;EUR_AF=0.7207;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.6299;SITEPOST=0.9954;SVTYPE=DEL_ALU	GT	1|0
8	61204986	DEL_pindel_25911	AGACACTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=1408;AF=0.28115;AFR_AF=0.2746;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.1766;END=61205303;EUR_AF=0.3579;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.2975;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|0
8	61945872	DEL_pindel_25941	CCTGGTGTCTTTCCCCTCCTCCTGGGGTAGCAGGGCAGCCTGGCTTGTTCTTCTCCCAAGGATGACAGAAATGCAGAAAAGCAAGCAGTCACAAGTCCTTTGCTTGCATGAAGTCCGCTGTCATCCCATTATCCAGAGCAAGTCACAGGG	C	.	PASS	AC=1993;AF=0.397963;AFR_AF=0.3343;AMR_AF=0.3184;AN=5008;CS=DEL_pindel;EAS_AF=0.4464;END=61946021;EUR_AF=0.4712;NS=2504;SAS_AF=0.4151;SITEPOST=0.9988;SVTYPE=DEL	GT	0|1
8	62169158	DEL_pindel_25953	CAAAAAAATATTATTTTAAAAACTAACCTACTCTTTATCTCAAAAACAAAAA	C	.	PASS	AC=1599;AF=0.319289;AFR_AF=0.3744;AMR_AF=0.2983;AN=5008;CS=DEL_pindel;EAS_AF=0.381;END=62169209;EUR_AF=0.2058;NS=2504;SAS_AF=0.3129;SITEPOST=0.9979;SVTYPE=DEL	GT	0|1
8	62930143	DEL_pindel_25972	TATATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC	T	.	PASS	AC=1845;AF=0.368411;AFR_AF=0.6846;AMR_AF=0.2406;AN=5008;CS=DEL_pindel;EAS_AF=0.3581;END=62930455;EUR_AF=0.2406;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.1738;SITEPOST=0.9984;SVTYPE=DEL_ALU	GT	0|1
8	63034973	BI_GS_DEL1_B1_P1462_40	T	<CN0>	100	PASS	AC=180;AF=0.0359425;AFR_AF=0.0613;AMR_AF=0.0447;AN=5008;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0.0169;END=63040435;EUR_AF=0.0368;MC=EM_DL_DEL96720,YL_CN_GBR_1952,UW_VH_6362,SI_BD_8976,UW_VH_3218;NS=2504;SAS_AF=0.0143;SVTYPE=DEL	GT	0|1
8	64144864	DEL_pindel_25999	TGTCTTCCTTTCTTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATC	T	.	PASS	AC=540;AF=0.107827;AFR_AF=0.2005;AMR_AF=0.1124;AN=5008;CS=DEL_pindel;EAS_AF=0.123;END=64145115;EUR_AF=0.0278;MEINFO=AluY,75,281,-;NS=2504;SAS_AF=0.046;SITEPOST=0.9968;SVTYPE=DEL_ALU	GT	0|1
8	66311348	DEL_pindel_26028	ATCTGAAGGTCTCTTGTAATAGATGATAATATGATCTCTGTACACTGGCTTTGTCACAAATGTGAAATATGCCCTGCTAAGCACTAGATGAAATTGTGACACTGTTCCTGGAAAGAATTCTC	A	.	PASS	AC=1276;AF=0.254792;AFR_AF=0.2617;AMR_AF=0.2853;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=66311469;EUR_AF=0.504;NS=2504;SAS_AF=0.229;SITEPOST=1;SVTYPE=DEL	GT	1|1
8	70357613	DEL_pindel_26113	ACAGGTTATGAGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=1815;AF=0.36242;AFR_AF=0.4463;AMR_AF=0.3357;AN=5008;CS=DEL_pindel;EAS_AF=0.3869;END=70357926;EUR_AF=0.2932;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.3139;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	1|0
8	71914591	ALU_umary_ALU_6806	A	<INS:ME:ALU>	.	.	AC=825;AF=0.164736;AFR_AF=0.0976;AMR_AF=0.1931;AN=5008;CS=ALU_umary;EAS_AF=0.0615;EUR_AF=0.3777;MEINFO=AluUndef,4,270,+;NS=2504;SAS_AF=0.1227;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=AAAATAAAAGCTA	GT	1|1
8	72551405	DEL_pindel_26143	AGTTTCACTATATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT	A	.	PASS	AC=2690;AF=0.537141;AFR_AF=0.5159;AMR_AF=0.5202;AN=5008;CS=DEL_pindel;EAS_AF=0.5258;END=72551739;EUR_AF=0.6233;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.501;SITEPOST=0.9942;SVTYPE=DEL_ALU	GT	0|1
8	74607596	DEL_pindel_26197	GCCAGAAAGGAACCCACTGCCTTGAAGGTAAGGACTCAATCCTGGCAGGATTCATTACCTGCTGACCAAAGAACCAATGGGTCCTGAA	G	.	PASS	AC=380;AF=0.0758786;AFR_AF=0.0734;AMR_AF=0.0418;AN=5008;CS=DEL_pindel;EAS_AF=0.1062;END=74607683;EUR_AF=0.0636;NS=2504;SAS_AF=0.0849;SITEPOST=0.99955;SVTYPE=DEL	GT	1|0
8	74787761	DEL_pindel_26202	TGTATAATATGGCATTTTAAAAAAAATACAGTTCCTCTTAGAGCTTAAGTAACTTCAGCAGCAGCAGCAACATCCTGGTGTGGGTTAGATAAATCTAC	T	.	PASS	AC=461;AF=0.0920527;AFR_AF=0.1528;AMR_AF=0.072;AN=5008;CS=DEL_pindel;EAS_AF=0.004;END=74787858;EUR_AF=0.1262;NS=2504;SAS_AF=0.0798;SITEPOST=1;SVTYPE=DEL	GT	1|0
8	74833794	BI_GS_DEL1_B1_P1473_691	C	<CN0>	100	PASS	AC=11;AF=0.00219649;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=-43,43;CIPOS=-43,43;CS=DEL_union;EAS_AF=0;END=74837515;EUR_AF=0.0089;MC=UW_VH_3062;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	1|0
8	75362835	SI_BD_9058	C	<CN0>	100	PASS	AC=3403;AF=0.679513;AFR_AF=0.7156;AMR_AF=0.6182;AN=5008;CIEND=-50,264;CIPOS=-264,50;CS=DEL_union;EAS_AF=0.6409;END=75366959;EUR_AF=0.6173;MC=EM_DL_DEL96977,UW_VH_14615,UW_VH_21750,UW_VH_1988,YL_CN_TSI_1924,UW_VH_11393;NS=2504;SAS_AF=0.7781;SVTYPE=DEL	GT	1|0
8	75375346	ALU_umary_ALU_6839	C	<INS:ME:ALU>	.	.	AC=2612;AF=0.521565;AFR_AF=0.5287;AMR_AF=0.4971;AN=5008;CS=ALU_umary;EAS_AF=0.5208;EUR_AF=0.5338;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0.5174;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGATTGATCCTC	GT	1|0
8	76126888	DEL_pindel_26220	TTCAAACTATATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3036;AF=0.60623;AFR_AF=0.6997;AMR_AF=0.487;AN=5008;CS=DEL_pindel;EAS_AF=0.5903;END=76127212;EUR_AF=0.5686;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6196;SITEPOST=0.9931;SVTYPE=DEL_ALU	GT	1|1
8	76138134	DEL_pindel_26221	ATTCCCGTTGTTACATCATTTTGCAAGTTCCTCAACAATAACTGAGATACACTTTTCT	A	.	PASS	AC=2642;AF=0.527556;AFR_AF=0.8139;AMR_AF=0.4597;AN=5008;CS=DEL_pindel;EAS_AF=0.3036;END=76138191;EUR_AF=0.5596;NS=2504;SAS_AF=0.3865;SITEPOST=0.9998;SVTYPE=DEL	GT	1|1
8	81767595	ALU_umary_ALU_6877	T	<INS:ME:ALU>	.	.	AC=141;AF=0.028155;AFR_AF=0.0265;AMR_AF=0.0288;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0656;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0194;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAATCTTTGCTT	GT	1|0
8	83351478	ALU_umary_ALU_6887	G	<INS:ME:ALU>	.	.	AC=575;AF=0.114816;AFR_AF=0.0182;AMR_AF=0.2161;AN=5008;CS=ALU_umary;EAS_AF=0.2242;EUR_AF=0.1044;MEINFO=AluYb8,1,281,+;NS=2504;SAS_AF=0.0716;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAGTAAAAAGGTGG	GT	0|1
8	84296948	DEL_pindel_26386	TAAGAAAATCCTACCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2807;AF=0.560503;AFR_AF=0.702;AMR_AF=0.5288;AN=5008;CS=DEL_pindel;EAS_AF=0.622;END=84297096;EUR_AF=0.3748;MEINFO=AluYa,163,281,+;NS=2504;SAS_AF=0.5194;SITEPOST=0.9968;SVTYPE=DEL_ALU	GT	1|1
8	84349766	DEL_pindel_26388	TATAAGGGCCAGAGACTTCTCAATTTAGTATAGCATATGAAATTATAAATTCTAGAAGCTCAGAGAACCCAAAG	T	.	PASS	AC=663;AF=0.132388;AFR_AF=0.2065;AMR_AF=0.0778;AN=5008;CS=DEL_pindel;EAS_AF=0.2004;END=84349839;EUR_AF=0.0716;NS=2504;SAS_AF=0.0634;SITEPOST=0.9991;SVTYPE=DEL	GT	0|1
8	84959372	DEL_pindel_26394	TATATATCTACCTATCTATCTATACACACATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTCCCTCCAAATATGAATGTCCATGGTATAGGAACAGGGTAACATGTCCAAGGCCATGGTATAGGAACAGAGTAACAGGGACTTAATGTAGAGTAGA	T	.	PASS	AC=2158;AF=0.430911;AFR_AF=0.2284;AMR_AF=0.5432;AN=5008;CS=DEL_pindel;EAS_AF=0.3988;END=84959555;EUR_AF=0.5577;NS=2504;SAS_AF=0.5276;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
8	85437274	ALU_umary_ALU_6900	T	<INS:ME:ALU>	.	.	AC=1404;AF=0.280351;AFR_AF=0.2277;AMR_AF=0.268;AN=5008;CS=ALU_umary;EAS_AF=0.2351;EUR_AF=0.2873;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3998;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CGGCCTCAATTTT	GT	1|1
8	87315040	L1_umary_LINE1_1704	C	<INS:ME:LINE1>	.	.	AC=1830;AF=0.365415;AFR_AF=0.1248;AMR_AF=0.4467;AN=5008;CS=L1_umary;EAS_AF=0.4742;EUR_AF=0.4344;MEINFO=LINE1,5921,6019,-;NS=2504;SAS_AF=0.4499;SITEPOST=1;SVLEN=98;SVTYPE=LINE1;TSD=null	GT	1|1
8	89392207	DEL_pindel_26463	TCAATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=4273;AF=0.853235;AFR_AF=0.8222;AMR_AF=0.8646;AN=5008;CS=DEL_pindel;EAS_AF=0.8433;END=89392514;EUR_AF=0.8817;MEINFO=AluYa4_4,2,281,-;NS=2504;SAS_AF=0.8681;SITEPOST=0.99;SVTYPE=DEL_ALU	GT	0|1
8	91069173	DEL_pindel_26494	TTCAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACGACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2141;AF=0.427516;AFR_AF=0.4002;AMR_AF=0.4582;AN=5008;CS=DEL_pindel;EAS_AF=0.5873;END=91069495;EUR_AF=0.2863;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4233;SITEPOST=0.9989;SVTYPE=DEL_ALU	GT	0|1
8	92677086	ALU_umary_ALU_6942	A	<INS:ME:ALU>	.	.	AC=1206;AF=0.240815;AFR_AF=0.0847;AMR_AF=0.2983;AN=5008;CS=ALU_umary;EAS_AF=0.3323;EUR_AF=0.3161;MEINFO=AluYa5,8,281,+;NS=2504;SAS_AF=0.2393;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=AAAAAAATTAAAATA	GT	0|1
8	96345249	DEL_pindel_26587	CATATATATATATATATATATATATATATATATATATATATATATATTTATATATATATATATATATATATATTTATATATATATATATATATATATATATTTATATATATATATATATATATATATTTATATATATAT	C	.	PASS	AC=3480;AF=0.694888;AFR_AF=0.5855;AMR_AF=0.7536;AN=5008;CS=DEL_pindel;EAS_AF=0.7847;END=96345387;EUR_AF=0.6372;NS=2504;SAS_AF=0.7679;SITEPOST=0.94515;SVTYPE=DEL	GT	0|1
8	97098073	DEL_pindel_26597	TGAAAGAGAGGTATTAGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAATCCGGCCTGGGCTAAACAGCGGGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4015;AF=0.801717;AFR_AF=0.7905;AMR_AF=0.7896;AN=5008;CS=DEL_pindel;EAS_AF=0.8274;END=97098425;EUR_AF=0.7883;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.8129;SITEPOST=0.9736;SVTYPE=DEL_ALU	GT	1|1
8	98595392	DEL_pindel_26628	AAAAAATAATAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=3417;AF=0.682308;AFR_AF=0.6853;AMR_AF=0.6744;AN=5008;CS=DEL_pindel;EAS_AF=0.6925;END=98595731;EUR_AF=0.7068;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6483;SITEPOST=0.95045;SVTYPE=DEL_ALU	GT	0|1
8	98783448	DEL_pindel_26631	TAATTTCCTTAGTCGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCAAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2946;AF=0.588259;AFR_AF=0.6634;AMR_AF=0.5331;AN=5008;CS=DEL_pindel;EAS_AF=0.6042;END=98783780;EUR_AF=0.5318;MEINFO=AluYa5,2,281,+;NS=2504;SAS_AF=0.5675;SITEPOST=0.9808;SVTYPE=DEL_ALU	GT	1|1
8	100782579	ALU_umary_ALU_6981	T	<INS:ME:ALU>	.	.	AC=111;AF=0.0221645;AFR_AF=0.0166;AMR_AF=0.0288;AN=5008;CS=ALU_umary;EAS_AF=0.0298;EUR_AF=0.0288;MEINFO=AluUndef,1,268,+;NS=2504;SAS_AF=0.0102;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=null	GT	1|0
8	105900483	ALU_umary_ALU_7003	T	<INS:ME:ALU>	.	.	AC=630;AF=0.125799;AFR_AF=0.2254;AMR_AF=0.0821;AN=5008;CS=ALU_umary;EAS_AF=0.0605;EUR_AF=0.1223;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.093;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=ATATACTTGATTTCCT	GT	0|1
8	106664522	ALU_umary_ALU_7006	T	<INS:ME:ALU>	.	.	AC=1541;AF=0.307708;AFR_AF=0.3744;AMR_AF=0.2853;AN=5008;CS=ALU_umary;EAS_AF=0.3343;EUR_AF=0.2982;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.2157;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AGCCCATTTTT	GT	1|1
8	106670518	DEL_pindel_26759	TAGAAATCAAAGCAGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1923;AF=0.383986;AFR_AF=0.4864;AMR_AF=0.3703;AN=5008;CS=DEL_pindel;EAS_AF=0.4008;END=106670838;EUR_AF=0.3598;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.2628;SITEPOST=0.99895;SVTYPE=DEL_ALU	GT	1|0
8	106703448	DEL_pindel_26761	TCCCAAAGAGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGACTACGGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGC	T	.	PASS	AC=453;AF=0.0904553;AFR_AF=0.1528;AMR_AF=0.0533;AN=5008;CS=DEL_pindel;EAS_AF=0.0268;END=106703774;EUR_AF=0.0755;MEINFO=AluY,2,281,-;NS=2504;SAS_AF=0.1135;SITEPOST=1;SVTYPE=DEL_ALU	GT	0|1
8	107207888	ALU_umary_ALU_7009	T	<INS:ME:ALU>	.	.	AC=2248;AF=0.448882;AFR_AF=0.0711;AMR_AF=0.4597;AN=5008;CS=ALU_umary;EAS_AF=0.6478;EUR_AF=0.5547;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0.638;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=GACACTTTTT	GT	0|1
8	107511093	DEL_pindel_26776	TAAAGAATTAGGAGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCGGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2375;AF=0.474241;AFR_AF=0.5582;AMR_AF=0.5389;AN=5008;CS=DEL_pindel;EAS_AF=0.3135;END=107511418;EUR_AF=0.5398;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4131;SITEPOST=0.9955;SVTYPE=DEL_ALU	GT	0|1
8	108120234	DEL_pindel_26796	GGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAGAATGCATGAACATTGGA	G	.	PASS	AC=1816;AF=0.36262;AFR_AF=0.32;AMR_AF=0.3991;AN=5008;CS=DEL_pindel;EAS_AF=0.3343;END=108120557;EUR_AF=0.4076;MEINFO=AluYb3a1,1,281,+;NS=2504;SAS_AF=0.3773;SITEPOST=0.98255;SVTYPE=DEL_ALU	GT	0|1
8	109135936	SVA_umary_SVA_389	G	<INS:ME:SVA>	.	.	AC=777;AF=0.155152;AFR_AF=0.112;AMR_AF=0.1628;AN=5008;CS=SVA_umary;EAS_AF=0.0972;EUR_AF=0.2237;MEINFO=SVA,7,1606,+;NS=2504;SAS_AF=0.1973;SITEPOST=1;SVLEN=1599;SVTYPE=SVA;TSD=AAAAGAATATTTATG	GT	1|0
8	112294057	UW_VH_3651	A	<CN0>	100	PASS	AC=1754;AF=0.35024;AFR_AF=0.1831;AMR_AF=0.4193;AN=5008;CIEND=0,526;CIPOS=-432,0;CS=DEL_union;EAS_AF=0.1984;END=112297142;EUR_AF=0.6988;MC=BI_GS_DEL1_B2_P1511_188,UW_VH_6973,YL_CN_GWD_2856,UW_VH_4593,SI_BD_9253,UW_VH_736,EM_DL_DEL98017,UW_VH_5300;NS=2504;SAS_AF=0.3252;SVTYPE=DEL	GT	1|1
8	113225848	DEL_pindel_26878	TACACTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2910;AF=0.58107;AFR_AF=0.7042;AMR_AF=0.5187;AN=5008;CS=DEL_pindel;EAS_AF=0.6359;END=113226191;EUR_AF=0.4821;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5041;SITEPOST=0.9894;SVTYPE=DEL_ALU	GT	1|0
8	114862620	DEL_pindel_26905	CATTCATCCTATGTAACCCTACAGCATTATTTAAATTTTAAATATGATTTTAAATAAATACACATTTGTTTGAGCCTTAAAGAAAGGTTGATACTATAGCTAAAATCAACAAATGCTCAATAAAAGCAGTGAAT	C	.	PASS	AC=809;AF=0.161542;AFR_AF=0.1097;AMR_AF=0.134;AN=5008;CS=DEL_pindel;EAS_AF=0.1885;END=114862753;EUR_AF=0.1899;NS=2504;SAS_AF=0.1943;SITEPOST=0.99865;SVTYPE=DEL	GT	1|0
8	114934391	BI_GS_DEL1_B5_P1513_958	A	<CN0>	100	PASS	AC=3741;AF=0.747005;AFR_AF=0.73;AMR_AF=0.6153;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5794;END=114934683;EUR_AF=0.8986;MC=DEL_pindel_26908,UW_VH_25344,UW_VH_739;NS=2504;SAS_AF=0.8804;SVTYPE=DEL	GT	1|1
8	115079316	BI_GS_DEL1_B4_P1514_24	A	<CN0>	100	PASS	AC=506;AF=0.101038;AFR_AF=0.1407;AMR_AF=0.0865;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0198;END=115080675;EUR_AF=0.1799;MC=SI_BD_9267,UW_VH_1819;NS=2504;SAS_AF=0.0603;SVTYPE=DEL	GT	0|1
8	117047019	ALU_umary_ALU_7081	A	<INS:ME:ALU>	.	.	AC=2032;AF=0.405751;AFR_AF=0.4614;AMR_AF=0.3617;AN=5008;CS=ALU_umary;EAS_AF=0.375;EUR_AF=0.3817;MEINFO=AluUndef,35,281,+;NS=2504;SAS_AF=0.4182;SITEPOST=1;SVLEN=246;SVTYPE=ALU;TSD=AATAAAGACATAACCAA	GT	0|1
8	118223529	DEL_pindel_26968	CCCAAAAGCTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAA	C	.	PASS	AC=3232;AF=0.645367;AFR_AF=0.5802;AMR_AF=0.7032;AN=5008;CS=DEL_pindel;EAS_AF=0.6895;END=118223809;EUR_AF=0.6342;MEINFO=AluYb6_2,39,281,-;NS=2504;SAS_AF=0.6585;SITEPOST=0.9753;SVTYPE=DEL_ALU	GT	0|1
8	118712788	DEL_pindel_26976	TCTATGGAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=3279;AF=0.654752;AFR_AF=0.6974;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.6548;END=118713119;EUR_AF=0.6412;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.5757;SITEPOST=0.97925;SVTYPE=DEL_ALU	GT	1|0
8	119165526	DEL_pindel_26991	AGTCCTAATAGGGATGAGTGAAGAGCCAAAGGGCAAGCCCCACTGCACAAGCACATTTGAGCCCTTTGCTCAT	A	.	PASS	AC=1118;AF=0.223243;AFR_AF=0.1831;AMR_AF=0.2954;AN=5008;CS=DEL_pindel;EAS_AF=0.2163;END=119165598;EUR_AF=0.2565;NS=2504;SAS_AF=0.1994;SITEPOST=1;SVTYPE=DEL	GT	1|0
8	119447044	DEL_pindel_26997	TAAAGTGTGCTTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAA	T	.	PASS	AC=2407;AF=0.480631;AFR_AF=0.3805;AMR_AF=0.5749;AN=5008;CS=DEL_pindel;EAS_AF=0.4573;END=119447355;EUR_AF=0.5517;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5;SITEPOST=0.9957;SVTYPE=DEL_ALU	GT	1|0
8	121681672	DEL_pindel_27059	TGAAAATGCTTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2381;AF=0.475439;AFR_AF=0.7209;AMR_AF=0.4207;AN=5008;CS=DEL_pindel;EAS_AF=0.3214;END=121681991;EUR_AF=0.4135;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.4049;SITEPOST=0.9988;SVTYPE=DEL_ALU	GT	0|1
8	121854760	DEL_pindel_27063	TTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCCGGAAAACATATTTTTTA	T	.	PASS	AC=576;AF=0.115016;AFR_AF=0.1914;AMR_AF=0.1254;AN=5008;CS=DEL_pindel;EAS_AF=0.0774;END=121855078;EUR_AF=0.0567;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.1033;SITEPOST=0.9993;SVTYPE=DEL_ALU	GT	1|1
8	121930605	DEL_pindel_27066	CATATATATATATATATATATATATATATATATATATATATATACACATATATATATATATATATATATATATATATACACATATATATATATATATATATATACACAT	C	.	PASS	AC=1426;AF=0.284744;AFR_AF=0.3177;AMR_AF=0.2291;AN=5008;CS=DEL_pindel;EAS_AF=0.2827;END=121930713;EUR_AF=0.3231;NS=2504;SAS_AF=0.2423;SITEPOST=0.9985;SVTYPE=DEL	GT	1|0
8	124680183	ALU_umary_ALU_7114	T	<INS:ME:ALU>	.	.	AC=1602;AF=0.319888;AFR_AF=0.1127;AMR_AF=0.3862;AN=5008;CS=ALU_umary;EAS_AF=0.4127;EUR_AF=0.4563;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.317;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGAACTCAGGT	GT	1|0
8	125889970	ALU_umary_ALU_7124	T	<INS:ME:ALU>	.	.	AC=2755;AF=0.55012;AFR_AF=0.4766;AMR_AF=0.5;AN=5008;CS=ALU_umary;EAS_AF=0.5645;EUR_AF=0.6233;MEINFO=AluYa5,23,274,-;NS=2504;SAS_AF=0.5951;SITEPOST=1;SVLEN=251;SVTYPE=ALU;TSD=TTCTTCTGATCTT	GT	0|1
8	127192196	UW_VH_14572	T	<CN0>	100	PASS	AC=1902;AF=0.379792;AFR_AF=0.5598;AMR_AF=0.4049;AN=5008;CIEND=0,539;CIPOS=-448,0;CS=DEL_union;EAS_AF=0.3333;END=127194569;EUR_AF=0.2783;MC=UW_VH_21674,EM_DL_DEL98369,UW_VH_22764,YL_CN_CHS_2065,UW_VH_1499,SI_BD_9319,UW_VH_17269,BI_GS_DEL1_B1_P1526_178,YL_CN_ITU_2052;NS=2504;SAS_AF=0.271;SVTYPE=DEL	GT	1|0
8	129244941	ALU_umary_ALU_7145	T	<INS:ME:ALU>	.	.	AC=959;AF=0.191494;AFR_AF=0.0719;AMR_AF=0.2478;AN=5008;CS=ALU_umary;EAS_AF=0.1885;EUR_AF=0.2972;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.2076;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TCCTTTCTCTTTT	GT	1|1
8	129708036	ALU_umary_ALU_7146	C	<INS:ME:ALU>	.	.	AC=558;AF=0.111422;AFR_AF=0.0174;AMR_AF=0.1153;AN=5008;CS=ALU_umary;EAS_AF=0.0734;EUR_AF=0.2634;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1186;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAAAAATCTGTGCC	GT	0|1
8	132168283	DEL_pindel_27297	TCTTCCCTTCTTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGCGCAGTGGCATGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACGACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=2014;AF=0.402157;AFR_AF=0.2943;AMR_AF=0.4352;AN=5008;CS=DEL_pindel;EAS_AF=0.4851;END=132168596;EUR_AF=0.3926;MEINFO=AluYa,2,281,-;NS=2504;SAS_AF=0.4489;SITEPOST=0.9994;SVTYPE=DEL_ALU	GT	1|0
8	132277657	UW_VH_4096	T	<CN0>	100	PASS	AC=3120;AF=0.623003;AFR_AF=0.4713;AMR_AF=0.6369;AN=5008;CIEND=0,604;CIPOS=-432,0;CS=DEL_union;EAS_AF=0.7282;END=132280535;EUR_AF=0.6093;MC=YL_CN_ASW_2140,YL_CN_GBR_1989,UW_VH_14598,YL_CN_GWD_2883,YL_CN_MSL_1962,YL_CN_CEU_2619,YL_CN_MXL_1730,YL_CN_KHV_2115,YL_CN_PUR_2499,UW_VH_21545;NS=2504;SAS_AF=0.7239;SVTYPE=DEL	GT	1|0
8	137160271	DUP_gs_CNV_8_137160271_137163814	T	<CN0>,<CN2>	.	PASS	AC=1476,1;AF=0.294728,0.00019968;AFR_AF=0.2761,0;AMR_AF=0.3545,0;AN=5008;CS=DUP_gs;EAS_AF=0.0863,0.001;END=137163814;EUR_AF=0.5139,0;MC=YL_CN_CHB_2088,UW_VH_4218,UW_VH_4661,SI_BD_9384,UW_VH_4786,BI_GS_DEL1_B1_P1536_150,UW_VH_1987,UW_VH_24969,EM_DL_DEL98710,UW_VH_9889;NS=2504;SAS_AF=0.2669,0;SITEPOST=1;SVTYPE=CNV	GT	0|1
8	138742943	UW_VH_752	T	<CN0>	100	PASS	AC=3503;AF=0.699481;AFR_AF=0.2595;AMR_AF=0.8372;AN=5008;CIEND=0,490;CIPOS=-502,0;CS=DEL_union;EAS_AF=0.8403;END=138743864;EUR_AF=0.8718;MC=DEL_pindel_27417,YL_CN_GIH_1643,SI_BD_9393;NS=2504;SAS_AF=0.8742;SVTYPE=DEL	GT	1|1
8	138743347	BI_GS_DEL1_B5_P1537_850	A	<CN0>	100	PASS	AC=3528;AF=0.704473;AFR_AF=0.2784;AMR_AF=0.8386;AN=5008;CIEND=-47,48;CIPOS=-47,48;CS=DEL_union;EAS_AF=0.8353;END=138743803;EUR_AF=0.8748;NS=2504;SAS_AF=0.8753;SVTYPE=DEL	GT	1|1
8	138860548	DEL_pindel_27424	TAAAGAGAAGGATAGGCCGGGCGCGATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCAGGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2844;AF=0.567891;AFR_AF=0.3638;AMR_AF=0.5634;AN=5008;CS=DEL_pindel;EAS_AF=0.746;END=138860872;EUR_AF=0.5974;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.6329;SITEPOST=0.9898;SVTYPE=DEL_ALU	GT	0|1
8	139325979	ALU_umary_ALU_7191	C	<INS:ME:ALU>	.	.	AC=1883;AF=0.375998;AFR_AF=0.3752;AMR_AF=0.3112;AN=5008;CS=ALU_umary;EAS_AF=0.2798;EUR_AF=0.4483;MEINFO=AluUndef,2,274,+;NS=2504;SAS_AF=0.4479;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AAGATACAAGCTAC	GT	0|1
8	140014070	DEL_pindel_27440	CCAGGCTGGGCTGCATCCTGCCCTGTGCTTTCACCTGTCACAGGCTGTGCTGCATCCTGCCCTGTGCATTCATCTGTCACAGGCTAGGCTGTGCCCTACCCTGTGCATTCATTTGTCA	C	.	PASS	AC=1487;AF=0.296925;AFR_AF=0.2663;AMR_AF=0.2752;AN=5008;CS=DEL_pindel;EAS_AF=0.3125;END=140014187;EUR_AF=0.3161;NS=2504;SAS_AF=0.318;SITEPOST=0.9974;SVTYPE=DEL	GT	0|1
8	143494784	SI_BD_9453	G	<CN0>	100	PASS	AC=3923;AF=0.783347;AFR_AF=0.792;AMR_AF=0.8084;AN=5008;CIEND=-50,270;CIPOS=-270,50;CS=DEL_union;EAS_AF=0.7054;END=143495714;EUR_AF=0.839;MC=BI_GS_DEL1_B1_P1542_407;NS=2504;SAS_AF=0.7771;SVTYPE=DEL	GT	0|1
8	145234823	DEL_pindel_27619	CCCTCTCACCAGGGCTCTGCTGCTCCTGCGTGTGGGGTCTCCTCAGCAGCCCCTCA	C	.	PASS	AC=1953;AF=0.389976;AFR_AF=0.2814;AMR_AF=0.4063;AN=5008;CS=DEL_pindel;EAS_AF=0.4296;END=145234878;EUR_AF=0.4235;NS=2504;SAS_AF=0.4499;SITEPOST=0.9983;SVTYPE=DEL	GT	1|0
8	145503113	DEL_pindel_27621	TGACCACCAAGGGCCATGACCGTCACGGGCCACGACCGCCATGGGCCATGACCCCCATGGGCCTCAAGACCACCACAGGCCAC	T	.	PASS	AC=1515;AF=0.302516;AFR_AF=0.3623;AMR_AF=0.2637;AN=5008;CS=DEL_pindel;EAS_AF=0.2113;END=145503195;EUR_AF=0.2823;NS=2504;SAS_AF=0.364;SITEPOST=0.98175;SVTYPE=DEL	GT	1|0
8	145645595	BI_GS_DEL1_B3_P1544_9	G	<CN0>	100	PASS	AC=122;AF=0.024361;AFR_AF=0.031;AMR_AF=0.0274;AN=5008;CIEND=-41,41;CIPOS=-41,41;CS=DEL_union;EAS_AF=0;END=145647589;EUR_AF=0.0537;MC=YL_CN_ACB_2404,EM_DL_DEL101106811,SI_BD_9486;NS=2504;SAS_AF=0.0082;SVTYPE=DEL	GT	0|1
8	146042931	DEL_pindel_27640	GGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACTTGAGGTCAGGAGATAGAGACCATCCTGGCCAACATAGTAAAACCCCATCTCTACTAAAAAGACAAAAATTA	G	.	PASS	AC=2516;AF=0.502396;AFR_AF=0.5;AMR_AF=0.5634;AN=5008;CS=DEL_pindel;EAS_AF=0.5308;END=146043066;EUR_AF=0.496;NS=2504;SAS_AF=0.4397;SITEPOST=0.9927;SVTYPE=DEL	GT	0|1
8	146057037	UW_VH_754	G	<CN0>	100	PASS	AC=2355;AF=0.470248;AFR_AF=0.3064;AMR_AF=0.5749;AN=5008;CIEND=0,510;CIPOS=-521,0;CS=DEL_union;EAS_AF=0.4196;END=146057833;EUR_AF=0.6461;MC=EM_DL_DEL101107101,BI_GS_DEL1_B5_P1545_51,SI_BD_9494;NS=2504;SAS_AF=0.4888;SVTYPE=DEL	GT	0|1
8	146192869	BI_GS_DEL1_B3_P1545_13	A	<CN0>	100	PASS	AC=2652;AF=0.529553;AFR_AF=0.2912;AMR_AF=0.4914;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.501;END=146193180;EUR_AF=0.7366;NS=2504;SAS_AF=0.6953;SVTYPE=DEL	GT	1|1
9	3780616	DEL_pindel_27726	TAAAGATATAAAAAATGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3814;AF=0.761581;AFR_AF=0.739;AMR_AF=0.7709;AN=5008;CS=DEL_pindel;EAS_AF=0.8155;END=3780942;EUR_AF=0.7614;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.7301;SITEPOST=0.938;SVTYPE=DEL_ALU	GT	1|0
9	4346658	DEL_pindel_27751	TAATAATGGATGGAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4249;AF=0.848442;AFR_AF=0.7769;AMR_AF=0.8934;AN=5008;CS=DEL_pindel;EAS_AF=0.8413;END=4346969;EUR_AF=0.8897;MEINFO=AluYa4_5,2,281,+;NS=2504;SAS_AF=0.8783;SITEPOST=0.9873;SVTYPE=DEL_ALU	GT	1|1
9	6700382	DUP_gs_CNV_9_6700382_6709249	G	<CN0>,<CN2>	.	PASS	AC=259,4;AF=0.0517173,0.00079872;AFR_AF=0.0083,0;AMR_AF=0.0865,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.001,0;END=6709249;EUR_AF=0.1352,0.001;MC=BI_GS_DEL1_B3_P1552_28,YL_CN_CLM_1822,YL_CN_IBS_1870,YL_CN_PEL_1880,SI_BD_9554;NS=2504;SAS_AF=0.0521,0.001;SITEPOST=1;SVTYPE=CNV	GT	1|0
9	6701890	BI_GS_DEL1_B1_P1552_571	T	<CN0>	100	PASS	AC=200;AF=0.0399361;AFR_AF=0.0061;AMR_AF=0.0692;AN=5008;CIEND=-49,49;CIPOS=-49,49;CS=DEL_union;EAS_AF=0.003;END=6702631;EUR_AF=0.1103;NS=2504;SAS_AF=0.0307;SVTYPE=DEL	GT	1|0
9	6708608	SI_BD_9555	A	<CN0>	100	PASS	AC=334;AF=0.0666933;AFR_AF=0.0756;AMR_AF=0.0793;AN=5008;CIEND=-50,208;CIPOS=-208,50;CS=DEL_union;EAS_AF=0.001;END=6710744;EUR_AF=0.1292;MC=BI_GS_DEL1_B2_P1552_439,UW_VH_12196,YL_CN_GWD_2923;NS=2504;SAS_AF=0.0491;SVTYPE=DEL	GT	1|0
9	6999377	DEL_pindel_27801	TAAAAACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACGCGGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4419;AF=0.882388;AFR_AF=0.8888;AMR_AF=0.8646;AN=5008;CS=DEL_pindel;EAS_AF=0.9018;END=6999684;EUR_AF=0.8608;MEINFO=AluYh7,1,281,+;NS=2504;SAS_AF=0.8885;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|1
9	7371803	DEL_pindel_27816	TGAAAAATAGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCGGGGGCGGAGCCTGCAGTGAGCCGAGATCGCGCCACTGCACTCCGGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1426;AF=0.284744;AFR_AF=0.4372;AMR_AF=0.2767;AN=5008;CS=DEL_pindel;EAS_AF=0.12;END=7372116;EUR_AF=0.2823;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.2566;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	0|1
9	9950428	DEL_pindel_27866	TAAGAAGAAAGTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGTGGACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2900;AF=0.579073;AFR_AF=0.733;AMR_AF=0.5115;AN=5008;CS=DEL_pindel;EAS_AF=0.7212;END=9950758;EUR_AF=0.3817;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.4755;SITEPOST=0.9932;SVTYPE=DEL_ALU	GT	0|1
9	10404415	EM_DL_DEL101111593	G	<CN0>	100	PASS	AC=3974;AF=0.79353;AFR_AF=0.68;AMR_AF=0.8199;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.8829;END=10405176;EUR_AF=0.8569;NS=2504;SAS_AF=0.771;SVTYPE=DEL	GT	1|0
9	10404562	BI_GS_DEL1_B2_P1556_238	C	<CN0>	100	PASS	AC=3974;AF=0.79353;AFR_AF=0.68;AMR_AF=0.8199;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8829;END=10405091;EUR_AF=0.8569;MC=DEL_pindel_27871,UW_VH_759;NS=2504;SAS_AF=0.771;SVTYPE=DEL	GT	1|0
9	10498740	DEL_pindel_27872	TAAAACCTTCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	.	PASS	AC=4216;AF=0.841853;AFR_AF=0.7852;AMR_AF=0.8429;AN=5008;CS=DEL_pindel;EAS_AF=0.869;END=10499050;EUR_AF=0.8807;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.8497;SITEPOST=0.9707;SVTYPE=DEL_ALU	GT	1|1
9	10828091	DEL_pindel_27885	TTTGAGTGACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGGGCCACCGCGCCCGGCC	T	.	PASS	AC=1420;AF=0.283546;AFR_AF=0.1657;AMR_AF=0.2695;AN=5008;CS=DEL_pindel;EAS_AF=0.501;END=10828426;EUR_AF=0.2078;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.3067;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|0
9	10908809	DEL_pindel_27886	CATGCCTGTAATCCCAGCACTTTAGGAGGCCGAGGTGGGTGGATCATTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATAGTGAAACCCGTTGTCTATTAAAAATACAAAAATTAGCCAGGCAGTAGTGGTGCGCACCTGTAATGCCAGCTACTCAGGAGGCCGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTTAGCTGAAATCGTGCCACTACACTCCAGTCTGGGTGAGACAGTGAGACCCTGTCTCAAAAAACAAAACAAAACAAACAACA	C	.	PASS	AC=424;AF=0.0846645;AFR_AF=0.1346;AMR_AF=0.0461;AN=5008;CS=DEL_pindel;EAS_AF=0.0536;END=10909099;EUR_AF=0.0447;MEINFO=AluSz,18,282,+;NS=2504;SAS_AF=0.1176;SITEPOST=0.9992;SVTYPE=DEL_ALU	GT	1|0
9	11329329	ALU_umary_ALU_7283	T	<INS:ME:ALU>	.	.	AC=660;AF=0.131789;AFR_AF=0.0023;AMR_AF=0.1455;AN=5008;CS=ALU_umary;EAS_AF=0.3413;EUR_AF=0.0586;MEINFO=AluUndef,4,280,-;NS=2504;SAS_AF=0.1564;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=CAGATATTAATTTCTT	GT	0|1
9	14877445	ALU_umary_ALU_7297	T	<INS:ME:ALU>	.	.	AC=552;AF=0.110224;AFR_AF=0.1619;AMR_AF=0.1383;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.163;MEINFO=AluYb8,1,279,-;NS=2504;SAS_AF=0.0777;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TGTTGTTTCTTT	GT	0|1
9	15394880	DEL_pindel_27973	CAAAAAAATACATATATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	C	.	PASS	AC=3062;AF=0.611422;AFR_AF=0.5076;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.6468;END=15395196;EUR_AF=0.659;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6002;SITEPOST=0.9612;SVTYPE=DEL_ALU	GT	0|1
9	15602580	DEL_pindel_27982	ATTGGTGTTACCCAAAAAGTTACCTCATTTTAAGATAGTGTTTCTCATTTCTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTT	A	.	PASS	AC=2641;AF=0.527356;AFR_AF=0.4183;AMR_AF=0.5879;AN=5008;CS=DEL_pindel;EAS_AF=0.7093;END=15602666;EUR_AF=0.4533;NS=2504;SAS_AF=0.5204;SITEPOST=0.999;SVTYPE=DEL	GT	0|1
9	15815277	UW_VH_25180	G	<CN0>	100	PASS	AC=1897;AF=0.378794;AFR_AF=0.4319;AMR_AF=0.3228;AN=5008;CIEND=0,268;CIPOS=-326,0;CS=DEL_union;EAS_AF=0.244;END=15821947;EUR_AF=0.4374;MC=SI_BD_9623,UW_VH_1505,BI_GS_DEL1_B5_P1561_901,YL_CN_FIN_2011,UW_VH_17676,UW_VH_3301;NS=2504;SAS_AF=0.4254;SVTYPE=DEL	GT	1|0
9	17874425	ALU_umary_ALU_7320	A	<INS:ME:ALU>	.	.	AC=694;AF=0.138578;AFR_AF=0.1188;AMR_AF=0.1542;AN=5008;CS=ALU_umary;EAS_AF=0.0248;EUR_AF=0.2256;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.182;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null	GT	1|0
9	18751826	DEL_pindel_28042	TAGAAATACAACTTGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCGGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3155;AF=0.629992;AFR_AF=0.6316;AMR_AF=0.6037;AN=5008;CS=DEL_pindel;EAS_AF=0.5982;END=18752116;EUR_AF=0.662;MEINFO=AluY,34,281,+;NS=2504;SAS_AF=0.6462;SITEPOST=0.985;SVTYPE=DEL_ALU	GT	1|1
9	21038453	ALU_umary_ALU_7331	A	<INS:ME:ALU>	.	.	AC=1294;AF=0.258387;AFR_AF=0.1974;AMR_AF=0.1686;AN=5008;CS=ALU_umary;EAS_AF=0.3472;EUR_AF=0.3221;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.2474;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0|1
9	21109534	ALU_umary_ALU_7332	T	<INS:ME:ALU>	.	.	AC=1678;AF=0.335064;AFR_AF=0.2678;AMR_AF=0.3818;AN=5008;CS=ALU_umary;EAS_AF=0.4226;EUR_AF=0.2813;MEINFO=AluUndef,9,270,-;NS=2504;SAS_AF=0.3579;SITEPOST=1;SVLEN=261;SVTYPE=ALU;TSD=GAAAAATATAT	GT	1|0
9	21261949	ALU_umary_ALU_7336	T	<INS:ME:ALU>	.	.	AC=470;AF=0.0938498;AFR_AF=0.1082;AMR_AF=0.0965;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.1471;MEINFO=AluUndef,1,257,+;NS=2504;SAS_AF=0.1125;SITEPOST=1;SVLEN=256;SVTYPE=ALU;TSD=AAAAAATGGT	GT	0|1
9	22288724	ALU_umary_ALU_7339	T	<INS:ME:ALU>	.	.	AC=2659;AF=0.53095;AFR_AF=0.2421;AMR_AF=0.6369;AN=5008;CS=ALU_umary;EAS_AF=0.6538;EUR_AF=0.667;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.5798;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GCCTGTGTTTCCTTTCT	GT	1|0
9	22999487	DEL_pindel_28142	TAAAAAATTTGAATGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3677;AF=0.734225;AFR_AF=0.7322;AMR_AF=0.745;AN=5008;CS=DEL_pindel;EAS_AF=0.7321;END=22999819;EUR_AF=0.7485;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.7168;SITEPOST=0.9626;SVTYPE=DEL_ALU	GT	1|1
9	23362812	UW_VH_14741	A	<CN0>	100	PASS	AC=1676;AF=0.334665;AFR_AF=0.09;AMR_AF=0.3559;AN=5008;CIEND=0,391;CIPOS=-402,0;CS=DEL_union;EAS_AF=0.4692;END=23377678;EUR_AF=0.4294;MC=YL_CN_KHV_2175,EM_DL_DEL99518,SI_BD_9678,BI_GS_DEL1_B2_P1569_267;NS=2504;SAS_AF=0.4141;SVTYPE=DEL	GT	0|1
9	23370987	BI_GS_DEL1_B3_P1569_26	A	<CN0>	100	PASS	AC=1698;AF=0.339058;AFR_AF=0.1082;AMR_AF=0.3545;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.4683;END=23372431;EUR_AF=0.4294;MC=UW_VH_12831,SI_BD_9679;NS=2504;SAS_AF=0.4141;SVTYPE=DEL	GT	0|1
9	28584919	DEL_pindel_28277	TGACTGCAAGAGATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCAC	T	.	PASS	AC=3495;AF=0.697883;AFR_AF=0.5877;AMR_AF=0.7464;AN=5008;CS=DEL_pindel;EAS_AF=0.754;END=28585011;EUR_AF=0.7376;MEINFO=AluSz,225,282,-;NS=2504;SAS_AF=0.7137;SITEPOST=0.9675;SVTYPE=DEL_ALU	GT	1|1
9	28846309	SI_BD_9715	T	<CN0>	100	PASS	AC=556;AF=0.111022;AFR_AF=0.1573;AMR_AF=0.0922;AN=5008;CIEND=-50,96;CIPOS=-96,82;CS=DEL_union;EAS_AF=0.1022;END=28847978;EUR_AF=0.0964;MC=YL_CN_GIH_1684,BI_GS_DEL1_B1_P1574_686,UW_VH_9783;NS=2504;SAS_AF=0.0859;SVTYPE=DEL	GT	0|1
9	28960619	ALU_umary_ALU_7371	G	<INS:ME:ALU>	.	.	AC=2009;AF=0.401158;AFR_AF=0.3139;AMR_AF=0.4352;AN=5008;CS=ALU_umary;EAS_AF=0.3879;EUR_AF=0.4751;MEINFO=AluYc1,11,281,+;NS=2504;SAS_AF=0.4325;SITEPOST=1;SVLEN=270;SVTYPE=ALU;TSD=AAGAAATATGTATAATTG	GT	0|1
9	29624691	DEL_pindel_28305	TAAGCCTGGGTAGATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3470;AF=0.692891;AFR_AF=0.6293;AMR_AF=0.6758;AN=5008;CS=DEL_pindel;EAS_AF=0.7589;END=29625012;EUR_AF=0.7286;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6861;SITEPOST=0.96275;SVTYPE=DEL_ALU	GT	1|1
9	30491283	DEL_pindel_28328	ACAAAAATAATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCCGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=2870;AF=0.573083;AFR_AF=0.2806;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.6538;END=30491594;EUR_AF=0.7127;MEINFO=AluYa5b1,2,281,-;NS=2504;SAS_AF=0.6595;SITEPOST=0.9702;SVTYPE=DEL_ALU	GT	1|1
9	30674468	L1_umary_LINE1_1818	T	<INS:ME:LINE1>	.	.	AC=931;AF=0.185903;AFR_AF=0.4115;AMR_AF=0.0922;AN=5008;CS=L1_umary;EAS_AF=0.1171;EUR_AF=0.1193;MEINFO=LINE1,5257,6015,-;NS=2504;SAS_AF=0.0869;SITEPOST=1;SVLEN=758;SVTYPE=LINE1;TSD=CAACCAAGACAGTAAATTTTTTTTTT	GT	1|0
9	31291353	BI_GS_DEL1_B1_P1577_233	A	<CN0>	100	PASS	AC=2346;AF=0.46845;AFR_AF=0.3018;AMR_AF=0.4481;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6161;END=31292673;EUR_AF=0.3539;MC=EM_DL_DEL101119722,SI_BD_9729;NS=2504;SAS_AF=0.6738;SVTYPE=DEL	GT	1|1
9	32092742	L1_umary_LINE1_1821	T	<INS:ME:LINE1>	.	.	AC=1141;AF=0.227835;AFR_AF=0.1793;AMR_AF=0.1643;AN=5008;CS=L1_umary;EAS_AF=0.2331;EUR_AF=0.2177;MEINFO=LINE1,4728,6016,-;NS=2504;SAS_AF=0.3436;SITEPOST=1;SVLEN=1288;SVTYPE=LINE1;TSD=TT	GT	1|0
9	33213068	EM_DL_DEL101120420	G	<CN0>	100	PASS	AC=2372;AF=0.473642;AFR_AF=0.236;AMR_AF=0.4928;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.6786;END=33213929;EUR_AF=0.5318;NS=2504;SAS_AF=0.5102;SVTYPE=DEL	GT	1|0
9	33213125	BI_GS_DEL1_B1_P1579_179	A	<CN0>	100	PASS	AC=2369;AF=0.473043;AFR_AF=0.2345;AMR_AF=0.4928;AN=5008;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.6786;END=33213403;EUR_AF=0.5308;NS=2504;SAS_AF=0.5102;SVTYPE=DEL	GT	1|0
9	36362880	BI_GS_DEL1_B1_P1582_297	C	<CN0>	100	PASS	AC=2373;AF=0.473842;AFR_AF=0.3222;AMR_AF=0.4467;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4802;END=36364079;EUR_AF=0.6193;MC=EM_DL_DEL101121817,UW_VH_4968,SI_BD_9761;NS=2504;SAS_AF=0.5419;SVTYPE=DEL	GT	1|1
9	36474157	BI_GS_DEL1_B3_P1582_26	A	<CN0>	100	PASS	AC=802;AF=0.160144;AFR_AF=0.118;AMR_AF=0.1052;AN=5008;CIEND=-42,43;CIPOS=-42,43;CS=DEL_union;EAS_AF=0.3413;END=36474999;EUR_AF=0.0676;MC=UW_VH_1826,UW_VH_21184;NS=2504;SAS_AF=0.1646;SVTYPE=DEL	GT	0|1
9	38555824	UW_VH_3064	A	<CN0>	100	PASS	AC=35;AF=0.00698882;AFR_AF=0.0008;AMR_AF=0.0159;AN=5008;CIEND=0,245;CIPOS=-309,0;CS=DEL_union;EAS_AF=0;END=38565194;EUR_AF=0.0219;MC=SI_BD_9768,YL_CN_PUR_2597;NS=2504;SAS_AF=0.001;SVTYPE=DEL	GT	1|0
9	40609334	ALU_umary_ALU_7431	G	<INS:ME:ALU>	.	.	AC=1143;AF=0.228235;AFR_AF=0.1437;AMR_AF=0.2608;AN=5008;CS=ALU_umary;EAS_AF=0.251;EUR_AF=0.2286;MEINFO=AluYa4_3,2,281,+;NS=2504;SAS_AF=0.2955;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AGAAAATGCCAGGATG	GT	0|1
9	43392405	DUP_gs_CNV_9_43392405_43404180	T	<CN0>,<CN2>,<CN3>	.	PASS	AC=905,1807,19;AF=0.180711,0.360823,0.00379393;AFR_AF=0.2352,0.1793,0.0038;AMR_AF=0.1441,0.4395,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.1855,0.379,0.006;END=43404180;EUR_AF=0.1461,0.4771,0.003;NS=2504;SAS_AF=0.1636,0.4121,0.0041;SITEPOST=0.9952;SVTYPE=CNV	GT	2|1
9	43450178	DUP_gs_CNV_9_43450178_43463455	A	<CN0>,<CN2>,<CN3>	.	PASS	AC=1228,128,9;AF=0.245208,0.0255591,0.00179712;AFR_AF=0.2814,0.0136,0;AMR_AF=0.2219,0.0202,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.251,0.0179,0.002;END=43463455;EUR_AF=0.2177,0.0586,0.003;NS=2504;SAS_AF=0.2352,0.0194,0.0031;SITEPOST=1;SVTYPE=CNV	GT	0|1
9	43495449	DUP_gs_CNV_9_43495449_43520900	G	<CN0>,<CN2>,<CN3>	.	PASS	AC=1159,375,13;AF=0.23143,0.0748802,0.00259585;AFR_AF=0.2829,0.0265,0.0008;AMR_AF=0.2061,0.0749,0;AN=5008;CS=DUP_gs;EAS_AF=0.248,0.0337,0.004;END=43520900;EUR_AF=0.1938,0.1233,0.004;NS=2504;SAS_AF=0.2014,0.1329,0.0041;SITEPOST=1;SVTYPE=CNV	GT	0|1
9	43580844	DUP_gs_CNV_9_43580844_43606160	A	<CN0>,<CN2>	.	PASS	AC=1222,222;AF=0.24401,0.0443291;AFR_AF=0.2905,0.0507;AMR_AF=0.2075,0.0259;AN=5008;CS=DUP_gs;EAS_AF=0.2619,0.0317;END=43606160;EUR_AF=0.2068,0.0726;NS=2504;SAS_AF=0.227,0.0327;SITEPOST=1;SVTYPE=CNV	GT	0|1
9	43612172	DUP_gs_CNV_9_43612172_43623150	G	<CN0>,<CN2>	.	PASS	AC=2966,35;AF=0.592252,0.00698882;AFR_AF=0.556,0.0144;AMR_AF=0.5706,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.7579,0.005;END=43623150;EUR_AF=0.5636,0.005;NS=2504;SAS_AF=0.5153,0.0031;SITEPOST=1;SVTYPE=CNV	GT	1|1
9	43652217	DUP_gs_CNV_9_43652217_43676146	T	<CN0>,<CN2>,<CN3>	.	PASS	AC=1257,135,14;AF=0.250998,0.0269569,0.00279553;AFR_AF=0.3238,0.0182,0.0008;AMR_AF=0.2061,0.0187,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.2758,0.0288,0.002;END=43676146;EUR_AF=0.1859,0.0447,0.004;NS=2504;SAS_AF=0.226,0.0245,0.0041;SITEPOST=1;SVTYPE=CNV	GT	0|1
9	44235869	DUP_gs_CNV_9_44235869_44252311	A	<CN0>,<CN2>	.	PASS	AC=1819,1536;AF=0.363219,0.306709;AFR_AF=0.2557,0.4236;AMR_AF=0.4755,0.1787;AN=5008;CS=DUP_gs;EAS_AF=0.2679,0.4206;END=44252311;EUR_AF=0.4642,0.2127;NS=2504;SAS_AF=0.4233,0.2188;SITEPOST=0.9999;SVTYPE=CNV	GT	2|1
9	44255190	DUP_gs_CNV_9_44255190_44276471	A	<CN0>,<CN2>	.	PASS	AC=2803,10;AF=0.559704,0.00199681;AFR_AF=0.329,0.0053;AMR_AF=0.7954,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.3581,0.001;END=44276471;EUR_AF=0.7465,0;NS=2504;SAS_AF=0.7198,0.001;SITEPOST=1;SVTYPE=CNV	GT	0|1
9	45700960	DUP_gs_CNV_9_45700960_45715411	G	<CN0>,<CN2>,<CN3>	.	PASS	AC=668,1247,83;AF=0.133387,0.249002,0.0165735;AFR_AF=0.1664,0.2587,0.0325;AMR_AF=0.1801,0.1816,0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.1379,0.2312,0.004;END=45715411;EUR_AF=0.0616,0.3062,0.0239;NS=2504;SAS_AF=0.1247,0.2434,0.0061;SITEPOST=0.98665;SVTYPE=CNV	GT	2|0
9	66478618	ALU_umary_ALU_7440	T	<INS:ME:ALU>	.	.	AC=584;AF=0.116613;AFR_AF=0.1339;AMR_AF=0.1124;AN=5008;CS=ALU_umary;EAS_AF=0.0575;EUR_AF=0.1312;MEINFO=AluUndef,1,203,-;NS=2504;SAS_AF=0.1421;SITEPOST=1;SVLEN=202;SVTYPE=ALU;TSD=null	GT	0|1
9	66497883	DUP_gs_CNV_9_66497883_66537264	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=4,353,3923,437;AF=0.00079872,0.0704872,0.783347,0.0872604;AFR_AF=0.0023,0.0711,0.7504,0.0719;AMR_AF=0,0.0735,0.8545,0.0245;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.1012,0.5665,0.252;END=66537264;EUR_AF=0,0.0288,0.9364,0.0209;NS=2504;SAS_AF=0,0.0787,0.8436,0.0511;SITEPOST=0.9933;SVTYPE=CNV	GT	3|3
9	68354131	DUP_gs_CNV_9_68354131_68388436	T	<CN2>,<CN3>	.	PASS	AC=4987,2;AF=0.995807,0.00039936;AFR_AF=0.9939,0;AMR_AF=0.9971,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.9921,0;END=68388436;EUR_AF=0.998,0;NS=2504;SAS_AF=0.999,0.001;SITEPOST=0.9999;SVTYPE=CNV	GT	1|1
9	69794966	DUP_gs_CNV_9_69794966_69839048	A	<CN2>,<CN3>	.	PASS	AC=4533,203;AF=0.905152,0.0405351;AFR_AF=0.9304,0.0174;AMR_AF=0.9251,0.0144;AN=5008;CS=DUP_gs;EAS_AF=0.8075,0.1389;END=69839048;EUR_AF=0.9324,0.0129;NS=2504;SAS_AF=0.9294,0.0174;SITEPOST=0.9999;SVTYPE=CNV	GT	1|1
9	71665323	DEL_pindel_28510	TAAGAGTGGAGCTGATGATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3745;AF=0.747804;AFR_AF=0.7262;AMR_AF=0.7536;AN=5008;CS=DEL_pindel;EAS_AF=0.7768;END=71665557;EUR_AF=0.7525;MEINFO=AluYc2,81,281,+;NS=2504;SAS_AF=0.7382;SITEPOST=0.95605;SVTYPE=DEL_ALU	GT	0|1
9	71738119	BI_GS_DEL1_B1_P1617_688	G	<CN0>	100	PASS	AC=3214;AF=0.641773;AFR_AF=0.5469;AMR_AF=0.8112;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6776;END=71743359;EUR_AF=0.6909;MC=UW_VH_5879,EM_DL_DEL100470,UW_VH_2181,UW_VH_2182,YL_CN_ACB_2571,UW_VH_17270,UW_VH_9217,SI_BD_9793,UW_VH_25169;NS=2504;SAS_AF=0.5624;SVTYPE=DEL	GT	1|0
9	71777926	DEL_pindel_28515	AAGTATCTTTATTTTATTTTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCCTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTC	A	.	PASS	AC=2073;AF=0.413938;AFR_AF=0.4183;AMR_AF=0.4813;AN=5008;CS=DEL_pindel;EAS_AF=0.5188;END=71778244;EUR_AF=0.3559;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3119;SITEPOST=0.99715;SVTYPE=DEL_ALU	GT	1|0
9	71804520	BI_GS_DEL1_B1_P1617_739	C	<CN0>	100	PASS	AC=2175;AF=0.434305;AFR_AF=0.4486;AMR_AF=0.3084;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3075;END=71804997;EUR_AF=0.5199;MC=DEL_pindel_28516;NS=2504;SAS_AF=0.547;SVTYPE=DEL	GT	0|1
9	71895338	SI_BD_9796	G	<CN0>	100	PASS	AC=4308;AF=0.860224;AFR_AF=0.9871;AMR_AF=0.8833;AN=5008;CIEND=-50,292;CIPOS=-292,51;CS=DEL_union;EAS_AF=0.6389;END=71896537;EUR_AF=0.8111;MC=UW_VH_25422,EM_DL_DEL101126186,UW_VH_781;NS=2504;SAS_AF=0.9509;SVTYPE=DEL	GT	1|1
9	73463597	DEL_pindel_28537	CAAAAGAAATTACCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCTAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2220;AF=0.443291;AFR_AF=0.4909;AMR_AF=0.4885;AN=5008;CS=DEL_pindel;EAS_AF=0.2659;END=73463913;EUR_AF=0.4841;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.4877;SITEPOST=0.9983;SVTYPE=DEL_ALU	GT	1|1
9	74544792	ALU_umary_ALU_7458	T	<INS:ME:ALU>	.	.	AC=1615;AF=0.322484;AFR_AF=0.2572;AMR_AF=0.2378;AN=5008;CS=ALU_umary;EAS_AF=0.3968;EUR_AF=0.3231;MEINFO=AluUndef,3,276,+;NS=2504;SAS_AF=0.3937;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=AAACTTAAAGATATCT	GT	1|1
9	75669517	DEL_pindel_28573	TAAGACTTGATATTGGAGATCGAGACCATGCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4103;AF=0.819289;AFR_AF=0.8132;AMR_AF=0.8055;AN=5008;CS=DEL_pindel;EAS_AF=0.8373;END=75669796;EUR_AF=0.8072;MEINFO=AluY,72,281,+;NS=2504;SAS_AF=0.8313;SITEPOST=0.96985;SVTYPE=DEL_ALU	GT	0|1
9	77524150	DEL_pindel_28601	CAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2506;AF=0.500399;AFR_AF=0.441;AMR_AF=0.4683;AN=5008;CS=DEL_pindel;EAS_AF=0.5804;END=77524337;EUR_AF=0.492;NS=2504;SAS_AF=0.5297;SITEPOST=0.9773;SVTYPE=DEL	GT	0|1
9	78736726	DEL_pindel_28630	ATTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCAGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2029;AF=0.405152;AFR_AF=0.3313;AMR_AF=0.4971;AN=5008;CS=DEL_pindel;EAS_AF=0.3919;END=78737038;EUR_AF=0.4632;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3937;SITEPOST=0.999;SVTYPE=DEL_ALU	GT	1|1
9	78895792	ALU_umary_ALU_7492	A	<INS:ME:ALU>	.	.	AC=424;AF=0.0846645;AFR_AF=0.1687;AMR_AF=0.0562;AN=5008;CS=ALU_umary;EAS_AF=0.0526;EUR_AF=0.0577;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.0521;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAAAAAGAGA	GT	1|0
9	83630437	DEL_pindel_28717	TAAGAAATTCAATTAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	T	.	PASS	AC=3175;AF=0.633986;AFR_AF=0.6793;AMR_AF=0.6311;AN=5008;CS=DEL_pindel;EAS_AF=0.5774;END=83630750;EUR_AF=0.6392;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6278;SITEPOST=0.972;SVTYPE=DEL_ALU	GT	1|0
9	85033845	DEL_pindel_28734	TAAAGATTTGTTCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCTAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1700;AF=0.339457;AFR_AF=0.385;AMR_AF=0.3199;AN=5008;CS=DEL_pindel;EAS_AF=0.4325;END=85034187;EUR_AF=0.2684;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2689;SITEPOST=0.9993;SVTYPE=DEL_ALU	GT	0|1
9	87775183	SI_BD_9881	A	<CN0>	100	PASS	AC=656;AF=0.13099;AFR_AF=0.2035;AMR_AF=0.1455;AN=5008;CIEND=-50,258;CIPOS=-258,50;CS=DEL_union;EAS_AF=0.0198;END=87776183;EUR_AF=0.2296;MC=UW_VH_790,BI_GS_DEL1_B2_P1633_628;NS=2504;SAS_AF=0.0358;SVTYPE=DEL	GT	0|1
9	87901405	DEL_pindel_28788	TTACATGTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3654;AF=0.729633;AFR_AF=0.798;AMR_AF=0.611;AN=5008;CS=DEL_pindel;EAS_AF=0.8075;END=87901712;EUR_AF=0.6113;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.7628;SITEPOST=0.99105;SVTYPE=DEL_ALU	GT	0|1
9	89154576	SI_BD_9886	G	<CN0>	100	PASS	AC=4098;AF=0.818291;AFR_AF=0.6914;AMR_AF=0.866;AN=5008;CIEND=-50,218;CIPOS=-218,50;CS=DEL_union;EAS_AF=0.9266;END=89155912;EUR_AF=0.7485;MC=EM_DL_DEL101132841,YL_CN_ESN_2377,YL_CN_MSL_2137,YL_CN_CHB_2280,YL_CN_ACB_2588,YL_CN_TSI_2191,YL_CN_PEL_2023,YL_CN_FIN_2137,YL_CN_BEB_1915,UW_VH_5061,YL_CN_JPT_2433,YL_CN_MXL_1895,YL_CN_KHV_2330,YL_CN_ASW_2302;NS=2504;SAS_AF=0.9162;SVTYPE=DEL	GT	1|0
9	89799093	DEL_pindel_28824	TAATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3985;AF=0.795727;AFR_AF=0.7511;AMR_AF=0.7911;AN=5008;CS=DEL_pindel;EAS_AF=0.8323;END=89799407;EUR_AF=0.7833;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.8344;SITEPOST=0.98375;SVTYPE=DEL_ALU	GT	0|1
9	91501994	DEL_pindel_28849	GTGGCTGCTGTGGGGGGTGGGGGTGAGATTCCCAGGTCACTGCAGTTGTGTACCTAGGAGGATTA	G	.	PASS	AC=3559;AF=0.710663;AFR_AF=0.6589;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.8274;END=91502058;EUR_AF=0.665;NS=2504;SAS_AF=0.7117;SITEPOST=0.99415;SVTYPE=DEL	GT	1|1
9	92176048	BI_GS_DEL1_B4_P1638_53	G	<CN0>	100	PASS	AC=441;AF=0.0880591;AFR_AF=0.0386;AMR_AF=0.1556;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1627;END=92177979;EUR_AF=0.0626;MC=EM_DL_DEL101134111,YL_CN_JPT_2435,UW_VH_793,UW_VH_4287;NS=2504;SAS_AF=0.0562;SVTYPE=DEL	GT	1|0
9	95884696	DEL_pindel_28945	GGGAAGGGGGGAGAGGAGAGGCTCTGAGCCTGGAAGGAGGGAGAGGAGAGGCTCTGAGCCT	G	.	PASS	AC=2000;AF=0.399361;AFR_AF=0.3911;AMR_AF=0.4207;AN=5008;CS=DEL_pindel;EAS_AF=0.38;END=95884756;EUR_AF=0.4135;NS=2504;SAS_AF=0.4008;SITEPOST=0.9989;SVTYPE=DEL	GT	0|1
9	96371386	ALU_umary_ALU_7564	T	<INS:ME:ALU>	.	.	AC=804;AF=0.160543;AFR_AF=0.0817;AMR_AF=0.1873;AN=5008;CS=ALU_umary;EAS_AF=0.1875;EUR_AF=0.2724;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.1053;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TTAGTGGTTGTTTT	GT	0|1
9	96730345	DEL_pindel_28964	TCCAGATCACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGA	T	.	PASS	AC=2891;AF=0.577276;AFR_AF=0.7088;AMR_AF=0.6643;AN=5008;CS=DEL_pindel;EAS_AF=0.6042;END=96730597;EUR_AF=0.493;MEINFO=AluYc1,61,281,-;NS=2504;SAS_AF=0.3967;SITEPOST=0.9975;SVTYPE=DEL_ALU	GT	0|1
9	97292906	DEL_pindel_28970	ACCAAACACCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	A	.	PASS	AC=3450;AF=0.688898;AFR_AF=0.6982;AMR_AF=0.7305;AN=5008;CS=DEL_pindel;EAS_AF=0.6875;END=97293231;EUR_AF=0.6918;MEINFO=AluYb6_2,3,281,-;NS=2504;SAS_AF=0.6452;SITEPOST=0.929;SVTYPE=DEL_ALU	GT	0|1
9	97314256	ALU_umary_ALU_7569	C	<INS:ME:ALU>	.	.	AC=1081;AF=0.215855;AFR_AF=0.0091;AMR_AF=0.1484;AN=5008;CS=ALU_umary;EAS_AF=0.3889;EUR_AF=0.2724;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3067;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGAGAGCTCAAC	GT	1|1
9	99062582	DEL_pindel_29003	CCCAAACAATTTCTCACACGGTAATTTTTTTAATTTCCATTGCTAAGTTTTTAAGGTTGCCAGGTTTAGCAAATAAGGATACAGAATGCCCACTTAAATTTGAAATTAAGGTAAATTATGAATTGTTTAATGCATGTCTCATGCCATATGTGAGTTATACTAAAAAAGTATTCCTTTTTTTCTGAAATTTAAATTTAACTGGGTATCCTGTATTTTATCTGGCAGCCCTATAAGCATATTAGAATCTTTCCTATTTTGCCTAGATAATATCTCTAAAGTCACTTAATCATTTTTGTCATTGGATTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	C	.	PASS	AC=1168;AF=0.233227;AFR_AF=0.1452;AMR_AF=0.3473;AN=5008;CS=DEL_pindel;EAS_AF=0.3145;END=99062920;EUR_AF=0.1769;NS=2504;SAS_AF=0.2454;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
9	100761058	DEL_pindel_29044	AGAAAGTGGTGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2272;AF=0.453674;AFR_AF=0.5787;AMR_AF=0.3876;AN=5008;CS=DEL_pindel;EAS_AF=0.2837;END=100761388;EUR_AF=0.4573;MEINFO=AluYa3_4,1,281,-;NS=2504;SAS_AF=0.5031;SITEPOST=0.9965;SVTYPE=DEL_ALU	GT	1|0
9	101309042	BI_GS_DEL1_B1_P1647_344	C	<CN0>	100	PASS	AC=2069;AF=0.413139;AFR_AF=0.1921;AMR_AF=0.5043;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6369;END=101311668;EUR_AF=0.4751;MC=UW_VH_19740,YL_CN_BEB_1927,YL_CN_MSL_2144,UW_VH_797,EM_DL_DEL102086;NS=2504;SAS_AF=0.3528;SVTYPE=DEL	GT	1|0
9	101347967	BI_GS_DEL1_B5_P1647_467	A	<CN0>	100	PASS	AC=2647;AF=0.528554;AFR_AF=0.6195;AMR_AF=0.4193;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.2738;END=101348322;EUR_AF=0.675;MC=UW_VH_798;NS=2504;SAS_AF=0.5951;SVTYPE=DEL	GT	0|1
9	102849310	ALU_umary_ALU_7594	G	<INS:ME:ALU>	.	.	AC=602;AF=0.120208;AFR_AF=0.3434;AMR_AF=0.0605;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.0825;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.0215;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAATAAAAAAAAAAACTTTG	GT	1|0
9	104219699	BI_GS_DEL1_B3_P1650_12	T	<CN0>	100	PASS	AC=3159;AF=0.630791;AFR_AF=0.6067;AMR_AF=0.5879;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5585;END=104220378;EUR_AF=0.6879;MC=UW_VH_25143,SI_BD_9967,DEL_pindel_29097,UW_VH_799;NS=2504;SAS_AF=0.7096;SVTYPE=DEL	GT	0|1
9	104443961	DEL_pindel_29101	TGAATATATCCCTATTCTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTGCAATTCCCACCTATGAGTGAGAATATGCAGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAGTGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTG	T	.	PASS	AC=2857;AF=0.570487;AFR_AF=0.5915;AMR_AF=0.5793;AN=5008;CS=DEL_pindel;EAS_AF=0.4683;END=104444727;EUR_AF=0.6113;MEINFO=LINE1,5292,6019,-;NS=2504;SAS_AF=0.5992;SITEPOST=0.9819;SVTYPE=DEL_LINE1	GT	0|1
9	105162485	DEL_pindel_29127	TTCTTGTTTTTTTTTTTTTGTTTGTTTGTTTTTTTTATTCTTTTTTCTTTTTTTTTTTTTTTATTATTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATC	T	.	PASS	AC=2513;AF=0.501797;AFR_AF=0.5719;AMR_AF=0.5706;AN=5008;CS=DEL_pindel;EAS_AF=0.5109;END=105162668;EUR_AF=0.5129;NS=2504;SAS_AF=0.3374;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
9	107708696	DEL_pindel_29175	CTAAGAGTTTTTATATTTAGTAAATATTTATATTTACTAAATTTATATTTAGTAAAATATAAGACA	C	.	PASS	AC=2321;AF=0.463458;AFR_AF=0.1339;AMR_AF=0.5591;AN=5008;CS=DEL_pindel;EAS_AF=0.6567;END=107708761;EUR_AF=0.5278;NS=2504;SAS_AF=0.5757;SITEPOST=0.9991;SVTYPE=DEL	GT	1|0
9	107798567	UW_VH_3160	A	<CN0>	100	PASS	AC=41;AF=0.0081869;AFR_AF=0;AMR_AF=0.0058;AN=5008;CIEND=0,285;CIPOS=-425,0;CS=DEL_union;EAS_AF=0;END=107803487;EUR_AF=0.0318;MC=YL_CN_CEU_2902,BI_GS_DEL1_B5_P1653_908;NS=2504;SAS_AF=0.0051;SVTYPE=DEL	GT	1|0
9	107816812	CINV_delly_INV00107146	T	<INV>	.	PASS	AC=2451;AF=0.489417;AFR_AF=0.4909;AMR_AF=0.4539;AN=5008;CIEND=-305,305;CIPOS=-305,305;CS=CINV_delly;EAS_AF=0.5139;END=107817348;EUR_AF=0.4463;IMPRECISE;NS=2504;SAS_AF=0.5317;SVTYPE=INV	GT	1|0
9	109675911	BI_GS_DEL1_B5_P1655_864	T	<CN0>	100	PASS	AC=268;AF=0.0535144;AFR_AF=0.0038;AMR_AF=0.0476;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0119;END=109676565;EUR_AF=0.0686;MC=UW_VH_2394;NS=2504;SAS_AF=0.1524;SVTYPE=DEL	GT	1|0
9	112430200	DEL_pindel_29289	TGGCTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGATTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2552;AF=0.509585;AFR_AF=0.6838;AMR_AF=0.4424;AN=5008;CS=DEL_pindel;EAS_AF=0.4315;END=112430515;EUR_AF=0.5229;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3885;SITEPOST=0.9981;SVTYPE=DEL_ALU	GT	1|0
9	113327089	ALU_umary_ALU_7653	G	<INS:ME:ALU>	.	.	AC=582;AF=0.116214;AFR_AF=0.0098;AMR_AF=0.0548;AN=5008;CS=ALU_umary;EAS_AF=0.249;EUR_AF=0.1292;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1534;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAGATTAATTATCTG	GT	0|1
9	114333161	BI_GS_DEL1_B5_P1660_383	A	<CN0>	100	PASS	AC=492;AF=0.0982428;AFR_AF=0.0023;AMR_AF=0.0994;AN=5008;CIEND=-11,11;CIPOS=-11,11;CS=DEL_union;EAS_AF=0.249;END=114333923;EUR_AF=0.0636;MC=BI_GS_DEL1_B4_P1660_69,UW_VH_2893;NS=2504;SAS_AF=0.1074;SVTYPE=DEL	GT	1|0
9	114653182	BI_GS_DEL1_B1_P1660_529	G	<CN0>	100	PASS	AC=65;AF=0.0129792;AFR_AF=0.0008;AMR_AF=0.0144;AN=5008;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0.001;END=114653934;EUR_AF=0.0328;MC=SI_BD_10021;NS=2504;SAS_AF=0.0204;SVTYPE=DEL	GT	1|0
9	115937084	DEL_pindel_29376	TAAGAGCTAGGGAAATTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCATCCTGGGCGACAGAGCGAGACTCCGCCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3391;AF=0.677117;AFR_AF=0.6536;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.6915;END=115937379;EUR_AF=0.662;MEINFO=AluY,39,281,+;NS=2504;SAS_AF=0.7168;SITEPOST=0.9845;SVTYPE=DEL_ALU	GT	1|1
9	118109642	DEL_pindel_29426	GGGCAATCAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTGGCCCAGGTGGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=3743;AF=0.747404;AFR_AF=0.73;AMR_AF=0.7752;AN=5008;CS=DEL_pindel;EAS_AF=0.7569;END=118109987;EUR_AF=0.7674;MEINFO=AluYi,1,281,-;NS=2504;SAS_AF=0.7209;SITEPOST=0.94285;SVTYPE=DEL_ALU	GT	1|1
9	118509752	ALU_umary_ALU_7676	T	<INS:ME:ALU>	.	.	AC=593;AF=0.118411;AFR_AF=0.1936;AMR_AF=0.0562;AN=5008;CS=ALU_umary;EAS_AF=0.1319;EUR_AF=0.0765;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.09;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CCCTATGGCCTCATTTAACCTT	GT	0|1
9	119477063	DEL_pindel_29453	TAAGAATCATGTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3258;AF=0.650559;AFR_AF=0.6649;AMR_AF=0.6686;AN=5008;CS=DEL_pindel;EAS_AF=0.63;END=119477397;EUR_AF=0.6372;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6534;SITEPOST=0.9875;SVTYPE=DEL_ALU	GT	1|0
9	121371514	DEL_pindel_29479	TTTATGTTTCACTTCCAAAAGATAGATTAACTGGACTGGAAATTCTGAGTTGAATA	T	.	PASS	AC=1149;AF=0.229433;AFR_AF=0.0953;AMR_AF=0.2507;AN=5008;CS=DEL_pindel;EAS_AF=0.2321;END=121371569;EUR_AF=0.2903;NS=2504;SAS_AF=0.3303;SITEPOST=0.9968;SVTYPE=DEL	GT	1|0
9	122531834	DEL_pindel_29512	TAAGAAAATTGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4280;AF=0.854633;AFR_AF=0.7746;AMR_AF=0.8818;AN=5008;CS=DEL_pindel;EAS_AF=0.9107;END=122532152;EUR_AF=0.8509;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.8896;SITEPOST=0.9914;SVTYPE=DEL_ALU	GT	1|1
9	123055184	ALU_umary_ALU_7688	T	<INS:ME:ALU>	.	.	AC=2019;AF=0.403155;AFR_AF=0.2769;AMR_AF=0.3775;AN=5008;CS=ALU_umary;EAS_AF=0.4405;EUR_AF=0.5;MEINFO=AluYa1_1,2,281,-;NS=2504;SAS_AF=0.454;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TCCTTTACTTTGTT	GT	1|0
9	124411470	BI_GS_DEL1_B2_P1670_318	A	<CN0>	100	PASS	AC=1039;AF=0.207468;AFR_AF=0.0378;AMR_AF=0.196;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.2867;END=124411788;EUR_AF=0.2008;NS=2504;SAS_AF=0.3701;SVTYPE=DEL	GT	0|1
9	124642001	DEL_pindel_29559	TTTGGGAGGCTGAGGTGGGAGAACTGCTTGAAGCCCTGAATCTAGACCAGGCTGGGCAACATAGCGAGACCCCACTTCTACAAAAAATTAAAAATTAGTCAGCTCTGGTGGTACGCACCTGCGGTCCTAACTAC	T	.	PASS	AC=2828;AF=0.564696;AFR_AF=0.5651;AMR_AF=0.4683;AN=5008;CS=DEL_pindel;EAS_AF=0.6647;END=124642134;EUR_AF=0.5427;NS=2504;SAS_AF=0.5521;SITEPOST=0.9862;SVTYPE=DEL	GT	0|1
9	128980176	ALU_umary_ALU_7709	T	<INS:ME:ALU>	.	.	AC=1460;AF=0.291534;AFR_AF=0.1596;AMR_AF=0.2349;AN=5008;CS=ALU_umary;EAS_AF=0.3621;EUR_AF=0.3419;MEINFO=AluUndef,140,281,+;NS=2504;SAS_AF=0.3855;SITEPOST=1;SVLEN=141;SVTYPE=ALU;TSD=AAGAATCTCTCACCTT	GT	0|1
9	131412056	EM_DL_DEL101148848	G	<CN0>	100	PASS	AC=3237;AF=0.646366;AFR_AF=0.4463;AMR_AF=0.7954;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.5099;END=131413976;EUR_AF=0.8698;MC=BI_GS_DEL1_B3_P1677_17,YL_CN_GWD_3203,YL_CN_ASW_2335;NS=2504;SAS_AF=0.7219;SVTYPE=DEL	GT	1|1
9	134391120	DEL_pindel_29763	AACAGGACACTTCCTCACACGGAGCACTTCCTCTAACATGGAGCACTTCCTGTAAC	A	.	PASS	AC=2134;AF=0.426118;AFR_AF=0.3109;AMR_AF=0.428;AN=5008;CS=DEL_pindel;EAS_AF=0.499;END=134391175;EUR_AF=0.4404;NS=2504;SAS_AF=0.4908;SITEPOST=0.9988;SVTYPE=DEL	GT	0|1
9	135296997	DEL_pindel_29789	TGAGAATCCTGGGTTCTCATGCTCTGGTTTCTCTTCAAATCGTATAAATCTTTCGCCTTTTACTAAAGATTTCTGTG	T	.	PASS	AC=4004;AF=0.799521;AFR_AF=0.7156;AMR_AF=0.8256;AN=5008;CS=DEL_pindel;EAS_AF=0.8462;END=135297073;EUR_AF=0.832;NS=2504;SAS_AF=0.8129;SITEPOST=0.97205;SVTYPE=DEL	GT	1|1
9	135938579	DUP_gs_CNV_9_135938579_135956026	G	<CN0>,<CN2>	.	PASS	AC=13,254;AF=0.00259585,0.0507189;AFR_AF=0.0023,0.0098;AMR_AF=0.0029,0.0331;AN=5008;CS=DUP_gs;EAS_AF=0.004,0.1141;END=135956026;EUR_AF=0.001,0.0417;NS=2504;SAS_AF=0.0031,0.0624;SITEPOST=1;SVTYPE=CNV	GT	0|2
9	136379210	DEL_pindel_29807	TAAGCAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=4578;AF=0.914137;AFR_AF=0.8933;AMR_AF=0.9078;AN=5008;CS=DEL_pindel;EAS_AF=0.9484;END=136379552;EUR_AF=0.8986;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.9274;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|1
9	136414101	DEL_pindel_29808	TCACAGTTTCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2792;AF=0.557508;AFR_AF=0.5802;AMR_AF=0.5504;AN=5008;CS=DEL_pindel;EAS_AF=0.4315;END=136414425;EUR_AF=0.6571;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5593;SITEPOST=0.9905;SVTYPE=DEL_ALU	GT	0|1
9	136761039	DEL_pindel_29826	CACACTAAAATCTTTTTTTTTTTTTTTTTTTTTAATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATA	C	.	PASS	AC=1166;AF=0.232827;AFR_AF=0.292;AMR_AF=0.1974;AN=5008;CS=DEL_pindel;EAS_AF=0.1637;END=136761267;EUR_AF=0.2107;MEINFO=SVA_E,1441,1627,-;NS=2504;SAS_AF=0.272;SITEPOST=0.999;SVTYPE=DEL_SVA	GT	1|0
9	138214060	UW_VH_17355	T	<CN0>	100	PASS	AC=2345;AF=0.468251;AFR_AF=0.7216;AMR_AF=0.5259;AN=5008;CIEND=0,532;CIPOS=-544,0;CS=DEL_union;EAS_AF=0.3185;END=138217603;EUR_AF=0.4026;MC=UW_VH_815,UW_VH_5243,YL_CN_GBR_2247,UW_VH_19324,SI_BD_10198,BI_GS_DEL1_B1_P1684_188,EM_DL_DEL103143,UW_VH_21246,UW_VH_3652,UW_VH_7806,UW_VH_4805,UW_VH_5220,UW_VH_17663,YL_CN_TSI_2243;NS=2504;SAS_AF=0.3067;SVTYPE=DEL	GT	1|1
9	138479100	BI_GS_DEL1_B1_P1684_388	A	<CN0>	100	PASS	AC=4100;AF=0.81869;AFR_AF=0.8018;AMR_AF=0.8516;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8175;END=138480204;EUR_AF=0.7883;MC=SI_BD_10204,YL_CN_YRI_2956,YL_CN_GBR_2248,UW_VH_5244,UW_VH_21186,UW_VH_2722,EM_DL_DEL101152234,UW_VH_6701,YL_CN_ITU_2315,YL_CN_PEL_2070,UW_VH_17465,YL_CN_STU_2316,UW_VH_20623;NS=2504;SAS_AF=0.8507;SVTYPE=DEL	GT	1|0
9	138562333	DEL_pindel_29859	ACGGGGGAGGAGAGAGTTCTGGCCCCCCCATCAGCCTCTCTCGCTTCTGCAGCTCTC	A	.	PASS	AC=3164;AF=0.631789;AFR_AF=0.5635;AMR_AF=0.6427;AN=5008;CS=DEL_pindel;EAS_AF=0.6736;END=138562389;EUR_AF=0.66;NS=2504;SAS_AF=0.6442;SITEPOST=0.9621;SVTYPE=DEL	GT	0|1
9	140253527	UW_VH_816	T	<CN0>	100	PASS	AC=3429;AF=0.684704;AFR_AF=0.4561;AMR_AF=0.7075;AN=5008;CIEND=0,427;CIPOS=-423,0;CS=DEL_union;EAS_AF=0.8532;END=140255973;EUR_AF=0.6561;MC=YL_CN_ASW_2378,SI_BD_10228,EM_DL_DEL103176,BI_GS_DEL1_B1_P1686_137,YL_CN_FIN_2208,YL_CN_GIH_1849;NS=2504;SAS_AF=0.8333;SVTYPE=DEL	GT	1|1
10	1292107	ALU_umary_ALU_7740	G	<INS:ME:ALU>	.	.	AC=1011;AF=0.201877;AFR_AF=0.0106;AMR_AF=0.1787;AN=5008;CS=ALU_umary;EAS_AF=0.2917;EUR_AF=0.2296;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3558;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAATCCTATTGAAGG	GT	0|1
10	1537791	DEL_pindel_30029	GCTTTAGAGGAGCCTTAGAAATATTCCATTCCATTAGTTAGAATATGATGAAAAGTACAAACTTTTCTAGTCATCATGGTTGTCATTATTAACATGATTGTCACCATA	G	.	PASS	AC=1508;AF=0.301118;AFR_AF=0.2224;AMR_AF=0.2939;AN=5008;CS=DEL_pindel;EAS_AF=0.3204;END=1537898;EUR_AF=0.3926;NS=2504;SAS_AF=0.2986;SITEPOST=1;SVTYPE=DEL	GT	0|1
10	2077560	ALU_umary_ALU_7741	A	<INS:ME:ALU>	.	.	AC=2064;AF=0.412141;AFR_AF=0.2874;AMR_AF=0.428;AN=5008;CS=ALU_umary;EAS_AF=0.4435;EUR_AF=0.4533;MEINFO=AluYa5,2,274,+;NS=2504;SAS_AF=0.4949;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AGAAATTTCAGCATTTTA	GT	0|1
10	3083763	SVA_umary_SVA_433	T	<INS:ME:SVA>	.	.	AC=2303;AF=0.459864;AFR_AF=0.5492;AMR_AF=0.4207;AN=5008;CS=SVA_umary;EAS_AF=0.2768;EUR_AF=0.5567;MEINFO=SVA,329,1626,+;NS=2504;SAS_AF=0.456;SITEPOST=1;SVLEN=1297;SVTYPE=SVA;TSD=AAATGAAAAATGGT	GT	1|0
10	3569025	ALU_umary_ALU_7750	T	<INS:ME:ALU>	.	.	AC=1674;AF=0.334265;AFR_AF=0.1157;AMR_AF=0.3343;AN=5008;CS=ALU_umary;EAS_AF=0.3274;EUR_AF=0.4891;MEINFO=AluUndef,4,281,+;NS=2504;SAS_AF=0.4775;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAAAATTCTGTGAACTT	GT	1|1
10	4290058	UW_VH_11588	A	<CN0>	100	PASS	AC=3522;AF=0.703275;AFR_AF=0.2769;AMR_AF=0.8069;AN=5008;CIEND=0,482;CIPOS=-544,0;CS=DEL_union;EAS_AF=0.8393;END=4291690;EUR_AF=0.8887;MC=UW_VH_6064,YL_CN_CHB_2369,YL_CN_FIN_2219,YL_CN_PEL_2105,YL_CN_ACB_2692,UW_VH_5266,EM_DL_DEL1096253,YL_CN_CEU_2991,YL_CN_PUR_2835,YL_CN_MXL_1989,YL_CN_ITU_2339,YL_CN_KHV_2433,YL_CN_CDX_2010,YL_CN_ASW_2393,YL_CN_JPT_2532,YL_CN_TSI_2264,UW_VH_13698,YL_CN_BEB_1991,YL_CN_YRI_2995,YL_CN_PJL_2455,YL_CN_CHS_2402,YL_CN_GBR_2282,UW_VH_17482,BI_GS_DEL1_B2_P1692_221,SI_BD_10327,UW_VH_1951;NS=2504;SAS_AF=0.8753;SVTYPE=DEL	GT	1|1
10	4634801	DEL_pindel_30123	CAAGAAAAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=4328;AF=0.864217;AFR_AF=0.8298;AMR_AF=0.8602;AN=5008;CS=DEL_pindel;EAS_AF=0.8849;END=4635120;EUR_AF=0.8738;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.8824;SITEPOST=0.98;SVTYPE=DEL_ALU	GT	1|1
10	4708523	BI_GS_DEL1_B1_P1692_679	T	<CN0>	100	PASS	AC=3602;AF=0.719249;AFR_AF=0.4387;AMR_AF=0.8213;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8859;END=4710520;EUR_AF=0.7614;MC=YL_CN_LWK_2264,YL_CN_TSI_2265,SI_BD_10333,EM_DL_DEL1096458;NS=2504;SAS_AF=0.8108;SVTYPE=DEL	GT	1|1
10	6064768	DEL_pindel_30146	CAGCCTTCGAGAAAGGACAACAAGCATTGGCCTCTTTGAAGCCTTCCAATAACTGTGCAGGGTGATATGGGGGA	C	.	PASS	AC=1211;AF=0.241813;AFR_AF=0.0477;AMR_AF=0.2896;AN=5008;CS=DEL_pindel;EAS_AF=0.3472;END=6064841;EUR_AF=0.34;NS=2504;SAS_AF=0.2607;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
10	6097370	DEL_pindel_30150	CTTGGCCATCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACCGCCCTTAATCCATTTAATCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACCTCTCTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCCATTCCACAAAGCCGCCATTGTCATCCTGGCCCGCTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCCCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGCCGACTCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGG	C	.	PASS	AC=3212;AF=0.641374;AFR_AF=0.553;AMR_AF=0.7219;AN=5008;CS=DEL_pindel;EAS_AF=0.5764;END=6097868;EUR_AF=0.7097;MEINFO=SVA_F,1097,1363,-;NS=2504;SAS_AF=0.7004;SITEPOST=0.983;SVTYPE=DEL_SVA	GT	1|1
10	7077041	BI_GS_DEL1_B2_P1695_66	T	<CN0>	100	PASS	AC=1131;AF=0.225839;AFR_AF=0.0598;AMR_AF=0.245;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0883;END=7078303;EUR_AF=0.4811;MC=YL_CN_PUR_2843,YL_CN_GBR_2289,UW_VH_18058,YL_CN_IBS_2131,YL_CN_CEU_3000,UW_VH_821,YL_CN_TSI_2268,EM_DL_DEL1098330;NS=2504;SAS_AF=0.316;SVTYPE=DEL	GT	1|0
10	7995834	BI_GS_DEL1_B1_P1695_949	T	<CN0>	100	PASS	AC=989;AF=0.197484;AFR_AF=0.0877;AMR_AF=0.1931;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3065;END=7996925;EUR_AF=0.2028;MC=UW_VH_8150;NS=2504;SAS_AF=0.2311;SVTYPE=DEL	GT	1|0
10	9097749	DEL_pindel_30198	TCATATTTTACTTTATATATATATATATATATATATATATATATATATATA	T	.	PASS	AC=3865;AF=0.771765;AFR_AF=0.7224;AMR_AF=0.7637;AN=5008;CS=DEL_pindel;EAS_AF=0.8661;END=9097799;EUR_AF=0.7266;NS=2504;SAS_AF=0.7935;SITEPOST=0.98755;SVTYPE=DEL	GT	1|0
10	9436189	DEL_pindel_30207	GGGTGACTTACTAAACAACATGAATTTATCTCTCACTCTTCTGGATGCTGGAAGTCCCAAGAT	G	.	PASS	AC=2059;AF=0.411142;AFR_AF=0.0832;AMR_AF=0.4625;AN=5008;CS=DEL_pindel;EAS_AF=0.5823;END=9436251;EUR_AF=0.5219;NS=2504;SAS_AF=0.5276;SITEPOST=0.9998;SVTYPE=DEL	GT	1|1
10	9474855	ALU_umary_ALU_7778	T	<INS:ME:ALU>	.	.	AC=1341;AF=0.267772;AFR_AF=0.0454;AMR_AF=0.2305;AN=5008;CS=ALU_umary;EAS_AF=0.4048;EUR_AF=0.3877;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3303;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TATTTTTTT	GT	1|1
10	9510994	ALU_umary_ALU_7779	T	<INS:ME:ALU>	.	.	AC=3407;AF=0.680312;AFR_AF=0.5756;AMR_AF=0.7017;AN=5008;CS=ALU_umary;EAS_AF=0.7133;EUR_AF=0.7256;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.726;SITEPOST=0.999;SVLEN=280;SVTYPE=ALU;TSD=TGCAAATTTTTTT	GT	1|0
10	10075348	DEL_pindel_30216	GTATATATATATGTATATGTGTGTGTATATATGTATATGTGTGTGTGTGTA	G	.	PASS	AC=1278;AF=0.255192;AFR_AF=0.3056;AMR_AF=0.2738;AN=5008;CS=DEL_pindel;EAS_AF=0.2073;END=10075398;EUR_AF=0.2744;NS=2504;SAS_AF=0.2035;SITEPOST=0.984;SVTYPE=DEL	GT	0|1
10	10493409	DEL_pindel_30224	TGTTCTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCGGGGCCACAGGCACCGACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2520;AF=0.503195;AFR_AF=0.4599;AMR_AF=0.5735;AN=5008;CS=DEL_pindel;EAS_AF=0.4792;END=10493732;EUR_AF=0.508;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.5317;SITEPOST=0.99445;SVTYPE=DEL_ALU	GT	0|1
10	12596183	BI_GS_DEL1_B5_P1700_571	A	<CN0>	100	PASS	AC=1290;AF=0.257588;AFR_AF=0.1286;AMR_AF=0.2911;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.3294;END=12596570;EUR_AF=0.4185;NS=2504;SAS_AF=0.1687;SVTYPE=DEL	GT	1|1
10	14936348	DEL_pindel_30316	AGCAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2115;AF=0.422324;AFR_AF=0.5923;AMR_AF=0.366;AN=5008;CS=DEL_pindel;EAS_AF=0.3829;END=14936665;EUR_AF=0.2485;MEINFO=AluYg,1,281,-;NS=2504;SAS_AF=0.4519;SITEPOST=0.9983;SVTYPE=DEL_ALU	GT	0|1
10	15532464	DEL_pindel_30325	TCTACATGAGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTTTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCC	T	.	PASS	AC=2926;AF=0.584265;AFR_AF=0.5393;AMR_AF=0.6326;AN=5008;CS=DEL_pindel;EAS_AF=0.6161;END=15532774;EUR_AF=0.5567;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6063;SITEPOST=0.9929;SVTYPE=DEL_ALU	GT	1|1
10	18503073	BI_GS_DEL1_B1_P1706_255	A	<CN0>	100	PASS	AC=2951;AF=0.589257;AFR_AF=0.3169;AMR_AF=0.7608;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.506;END=18503589;EUR_AF=0.7903;MC=DEL_pindel_30365,SI_BD_10419;NS=2504;SAS_AF=0.7147;SVTYPE=DEL	GT	1|0
10	19216666	L1_umary_LINE1_1920	A	<INS:ME:LINE1>	.	.	AC=629;AF=0.125599;AFR_AF=0.1452;AMR_AF=0.0447;AN=5008;CS=L1_umary;EAS_AF=0.1647;EUR_AF=0.0895;MEINFO=LINE1,5232,5989,+;NS=2504;SAS_AF=0.1534;SITEPOST=1;SVLEN=757;SVTYPE=LINE1;TSD=AAGAAGTGAGACATA	GT	0|1
10	19397308	DEL_pindel_30395	TGTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2705;AF=0.540136;AFR_AF=0.6604;AMR_AF=0.5533;AN=5008;CS=DEL_pindel;EAS_AF=0.4871;END=19397645;EUR_AF=0.4851;MEINFO=AluYb6_2,1,280,-;NS=2504;SAS_AF=0.4796;SITEPOST=0.9959;SVTYPE=DEL_ALU	GT	1|0
10	19504645	DEL_pindel_30398	AATAAATTAGTATAAATAATTTAGTATAAATAATAATTAGTATAAACAAATAATTTAGTATAATTAGTATAAATAAATAGTATATTTATTTATATAAATAATTAGTATAAATACATAATTTAGTATAAATAATAAAACTC	A	.	PASS	AC=1518;AF=0.303115;AFR_AF=0.2753;AMR_AF=0.4236;AN=5008;CS=DEL_pindel;EAS_AF=0.2827;END=19504784;EUR_AF=0.3887;NS=2504;SAS_AF=0.1881;SITEPOST=0.9989;SVTYPE=DEL	GT	1|0
10	19996544	YL_CN_PEL_2120	C	<CN0>	100	PASS	AC=1834;AF=0.366214;AFR_AF=0.1498;AMR_AF=0.5202;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.3978;END=19998179;EUR_AF=0.3966;MC=YL_CN_STU_2348,YL_CN_CLM_2050;NS=2504;SAS_AF=0.4857;SVTYPE=DEL	GT	0|1
10	20667245	DEL_pindel_30429	TAAAAGATTAGTAAGGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2449;AF=0.489018;AFR_AF=0.292;AMR_AF=0.5749;AN=5008;CS=DEL_pindel;EAS_AF=0.6875;END=20667565;EUR_AF=0.4841;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4949;SITEPOST=0.9946;SVTYPE=DEL_ALU	GT	0|1
10	23635492	DEL_pindel_30486	AGAAAAACACGCAGCACATGCATGAGGCAACTGCAAGAGAAATACCAACTAGGCCTTTGAAGGACTCTATTCCTTCTTCCTAAACCACTACTAGGGAAAACATTGTTTAAAGATGTCAGTGTTTTGGCTG	A	.	PASS	AC=3311;AF=0.661142;AFR_AF=0.7277;AMR_AF=0.6542;AN=5008;CS=DEL_pindel;EAS_AF=0.8294;END=23635621;EUR_AF=0.4622;NS=2504;SAS_AF=0.6074;SITEPOST=0.9994;SVTYPE=DEL	GT	1|0
10	24376838	BI_GS_DEL1_B2_P1712_268	T	<CN0>	100	PASS	AC=1127;AF=0.22504;AFR_AF=0.0469;AMR_AF=0.2738;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0417;END=24378445;EUR_AF=0.493;MC=BI_GS_DEL1_B3_P1712_22,YL_CN_ITU_2355,YL_CN_GIH_1874,YL_CN_STU_2353,YL_CN_TSI_2281,UW_VH_1953,YL_CN_MXL_2012;NS=2504;SAS_AF=0.3446;SVTYPE=DEL	GT	1|0
10	25707715	L1_umary_LINE1_1934	T	<INS:ME:LINE1>	.	.	AC=2404;AF=0.480032;AFR_AF=0.4622;AMR_AF=0.4135;AN=5008;CS=L1_umary;EAS_AF=0.2778;EUR_AF=0.6491;MEINFO=LINE1,73,6018,-;NS=2504;SAS_AF=0.5859;SITEPOST=1;SVLEN=5945;SVTYPE=LINE1;TSD=GAAAATAATCTTTTGTTTGACTTATTTTT	GT	0|1
10	26185093	DEL_pindel_30541	AAAAAAAACAGGTAATATATATGAAAACTTCTATAAGCCCTAAGTGCTATATAAATGTGACTATTTTTT	A	.	PASS	AC=813;AF=0.16234;AFR_AF=0.1641;AMR_AF=0.1859;AN=5008;CS=DEL_pindel;EAS_AF=0.2044;END=26185161;EUR_AF=0.1471;NS=2504;SAS_AF=0.1155;SITEPOST=0.992;SVTYPE=DEL	GT	1|0
10	26354751	DEL_pindel_30545	CAAAAAGAGCAGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTATAGTCCCAGCTACACGGGAGGCTGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=1708;AF=0.341054;AFR_AF=0.2723;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.2817;END=26355068;EUR_AF=0.4533;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.4008;SITEPOST=0.9983;SVTYPE=DEL_ALU	GT	1|1
10	26767941	DEL_pindel_30548	TAAAAATTGACATATATTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3447;AF=0.688299;AFR_AF=0.7186;AMR_AF=0.6787;AN=5008;CS=DEL_pindel;EAS_AF=0.7093;END=26768247;EUR_AF=0.6521;MEINFO=AluY,17,281,+;NS=2504;SAS_AF=0.6697;SITEPOST=0.9574;SVTYPE=DEL_ALU	GT	0|1
10	26999005	EM_DL_DEL09523	T	<CN0>	100	PASS	AC=2423;AF=0.483826;AFR_AF=0.4682;AMR_AF=0.6412;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3998;END=27002143;EUR_AF=0.6223;MC=UW_VH_18845,UW_VH_25423,UW_VH_11733,UW_VH_7158,UW_VH_12591,UW_VH_7186,UW_VH_4607,SI_BD_10463,UW_VH_26,UW_VH_10607,YL_CN_CHB_2404,UW_VH_19256,UW_VH_18901,UW_VH_13907,UW_VH_21594,BI_GS_DEL1_B1_P1714_841,UW_VH_16194,UW_VH_13612,UW_VH_20731;NS=2504;SAS_AF=0.3374;SVTYPE=DEL	GT	1|1
10	27224091	YL_CN_STU_2356	C	<CN0>	100	PASS	AC=529;AF=0.105631;AFR_AF=0.0446;AMR_AF=0.1455;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.004;END=27228168;EUR_AF=0.2485;NS=2504;SAS_AF=0.1176;SVTYPE=DEL	GT	1|0
10	27638254	BI_GS_DEL1_B5_P1715_643	A	<CN0>	100	PASS	AC=775;AF=0.154752;AFR_AF=0.0991;AMR_AF=0.1037;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3929;END=27642097;EUR_AF=0.0517;MC=YL_CN_ITU_2357,EM_DL_DEL09558,UW_VH_2398,SI_BD_10469;NS=2504;SAS_AF=0.1268;SVTYPE=DEL	GT	0|1
10	29102541	ALU_umary_ALU_7873	T	<INS:ME:ALU>	.	.	AC=1948;AF=0.388978;AFR_AF=0.3495;AMR_AF=0.3329;AN=5008;CS=ALU_umary;EAS_AF=0.4196;EUR_AF=0.4304;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.408;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CTAAATCATCTATT	GT	0|1
10	29712145	DEL_pindel_30625	TTGCATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATATGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATTGAAAACTGGCACAAGACAGGGA	T	.	PASS	AC=1817;AF=0.362819;AFR_AF=0.3169;AMR_AF=0.3818;AN=5008;CS=DEL_pindel;EAS_AF=0.4444;END=29712720;EUR_AF=0.3479;MEINFO=LINE1,5524,6019,-;NS=2504;SAS_AF=0.3425;SITEPOST=0.9998;SVTYPE=DEL_LINE1	GT	1|0
10	29883209	DEL_pindel_30628	GATCTGAAACACTCCTAGGTCCCAACCATTTCGGATGAGAGATACTCAACCTGTAT	G	.	PASS	AC=2192;AF=0.4377;AFR_AF=0.5363;AMR_AF=0.464;AN=5008;CS=DEL_pindel;EAS_AF=0.253;END=29883264;EUR_AF=0.4712;NS=2504;SAS_AF=0.4417;SITEPOST=0.9971;SVTYPE=DEL	GT	1|1
10	29918527	BI_GS_DEL1_B2_P1717_641	G	<CN0>	100	PASS	AC=379;AF=0.0756789;AFR_AF=0.0265;AMR_AF=0.1844;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.001;END=29918997;EUR_AF=0.1243;MC=DEL_pindel_30630;NS=2504;SAS_AF=0.092;SVTYPE=DEL	GT	1|0
10	32705726	DEL_pindel_30681	AATATTCTATTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATAT	A	.	PASS	AC=3947;AF=0.788139;AFR_AF=0.7443;AMR_AF=0.7896;AN=5008;CS=DEL_pindel;EAS_AF=0.8165;END=32706064;EUR_AF=0.7942;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.8108;SITEPOST=0.9568;SVTYPE=DEL_ALU	GT	1|0
10	34684468	DEL_pindel_30726	CAAGAAAAACATCATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2561;AF=0.511382;AFR_AF=0.6747;AMR_AF=0.4654;AN=5008;CS=DEL_pindel;EAS_AF=0.4117;END=34684793;EUR_AF=0.4294;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5102;SITEPOST=0.9949;SVTYPE=DEL_ALU	GT	1|0
10	35593206	DEL_pindel_30759	GCTTTTTTCTCCTTTTATTTTTTTTTTTTTTTTATTTTTTATTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCTCCCGGC	G	.	PASS	AC=1908;AF=0.38099;AFR_AF=0.475;AMR_AF=0.389;AN=5008;CS=DEL_pindel;EAS_AF=0.3462;END=35593536;EUR_AF=0.2992;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.3681;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|1
10	46262157	DUP_uwash_chr10_46262157_46305352	A	<CN2>,<CN3>,<CN4>	.	PASS	AC=4947,58,3;AF=0.987819,0.0115815,0.00059904;AFR_AF=0.9561,0.0416,0.0023;AMR_AF=0.9957,0.0043,0;AN=5008;CS=DUP_uwash;EAS_AF=1,0,0;END=46305352;EUR_AF=1,0,0;NS=2504;SAS_AF=1,0,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
10	46551272	DUP_uwash_chr10_46551272_46693058	C	<CN2>,<CN3>	.	PASS	AC=4883,97;AF=0.97504,0.019369;AFR_AF=0.9834,0.0129;AMR_AF=0.9813,0.0115;AN=5008;CS=DUP_uwash;EAS_AF=0.997,0.002;END=46693058;EUR_AF=0.9513,0.0378;NS=2504;SAS_AF=0.9611,0.0327;SITEPOST=1;SVTYPE=CNV	GT	2|1
10	46976292	DUP_gs_CNV_10_46976292_47023561	T	<CN2>,<CN3>,<CN4>	.	PASS	AC=4472,357,91;AF=0.892971,0.0712859,0.0181709;AFR_AF=0.8956,0.0711,0.0098;AMR_AF=0.9063,0.0605,0.0202;AN=5008;CS=DUP_gs;EAS_AF=0.9544,0.0357,0.002;END=47023561;EUR_AF=0.825,0.1083,0.0388;NS=2504;SAS_AF=0.8865,0.0777,0.0235;SITEPOST=0.9996;SVTYPE=CNV	GT	3|2
10	47007970	DUP_gs_CNV_10_47007970_47086710	T	<CN2>,<CN3>,<CN4>	.	PASS	AC=4481,346,97;AF=0.894768,0.0690895,0.019369;AFR_AF=0.8971,0.0719,0.0091;AMR_AF=0.9063,0.0576,0.0231;AN=5008;CS=DUP_gs;EAS_AF=0.9544,0.0357,0.002;END=47086710;EUR_AF=0.83,0.1024,0.0417;NS=2504;SAS_AF=0.8885,0.0736,0.0256;SITEPOST=0.9995;SVTYPE=CNV	GT	3|3
10	47089972	DUP_gs_CNV_10_47089972_47150813	G	<CN2>,<CN3>,<CN4>	.	PASS	AC=4471,366,86;AF=0.892772,0.0730831,0.0171725;AFR_AF=0.8903,0.0772,0.0083;AMR_AF=0.9063,0.0576,0.0231;AN=5008;CS=DUP_gs;EAS_AF=0.9544,0.0357,0.002;END=47150813;EUR_AF=0.83,0.1133,0.0328;NS=2504;SAS_AF=0.8875,0.0757,0.0245;SITEPOST=0.9997;SVTYPE=CNV	GT	3|3
10	47383857	DUP_gs_CNV_10_47383857_47395064	T	<CN0>,<CN2>,<CN3>	.	PASS	AC=29,433,31;AF=0.00579073,0.0864617,0.0061901;AFR_AF=0.0091,0.121,0.0038;AMR_AF=0.0029,0.049,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.0079,0.0665,0.003;END=47395064;EUR_AF=0.005,0.0746,0.004;NS=2504;SAS_AF=0.002,0.0992,0.0164;SITEPOST=0.9857;SVTYPE=CNV	GT	2|0
10	47531022	DUP_gs_CNV_10_47531022_47599037	A	<CN0>,<CN2>,<CN3>	.	PASS	AC=63,150,11;AF=0.0125799,0.0299521,0.00219649;AFR_AF=0.0303,0.0393,0.003;AMR_AF=0.0086,0.0288,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.0159,0.001;END=47599037;EUR_AF=0.0089,0.0408,0.003;NS=2504;SAS_AF=0.0072,0.0215,0.001;SITEPOST=0.9999;SVTYPE=CNV	GT	2|0
10	47596038	DUP_gs_CNV_10_47596038_47634490	G	<CN0>,<CN2>,<CN3>	.	PASS	AC=63,154,10;AF=0.0125799,0.0307508,0.00199681;AFR_AF=0.0303,0.0378,0.003;AMR_AF=0.0086,0.0317,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.0169,0.001;END=47634490;EUR_AF=0.0089,0.0408,0.003;NS=2504;SAS_AF=0.0072,0.0245,0.001;SITEPOST=1;SVTYPE=CNV	GT	2|0
10	47645964	DUP_gs_CNV_10_47645964_47697149	T	<CN0>,<CN2>,<CN3>	.	PASS	AC=9,139,8;AF=0.00179712,0.0277556,0.00159744;AFR_AF=0.0045,0.0295,0.0023;AMR_AF=0,0.0288,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0,0.0119,0.001;END=47697149;EUR_AF=0.002,0.0437,0.001;NS=2504;SAS_AF=0.001,0.0245,0.001;SITEPOST=0.9992;SVTYPE=CNV	GT	0|2
10	47894775	DUP_uwash_chr10_47894775_47999751	T	<CN2>,<CN3>,<CN4>	.	PASS	AC=4962,43,2;AF=0.990815,0.00858626,0.00039936;AFR_AF=0.969,0.0287,0.0015;AMR_AF=0.9957,0.0043,0;AN=5008;CS=DUP_uwash;EAS_AF=1,0,0;END=47999751;EUR_AF=0.999,0.001,0;NS=2504;SAS_AF=0.999,0.001,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
10	48419952	ALU_umary_ALU_7936	T	<INS:ME:ALU>	.	.	AC=1457;AF=0.290935;AFR_AF=0.031;AMR_AF=0.415;AN=5008;CS=ALU_umary;EAS_AF=0.3879;EUR_AF=0.4264;MEINFO=AluYa4_3,1,278,-;NS=2504;SAS_AF=0.3149;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=ATAAAATTT	GT	1|1
10	48751829	DUP_uwash_chr10_48751828_48880554	C	<CN2>,<CN3>	.	PASS	AC=4860,105;AF=0.970447,0.0209664;AFR_AF=0.9834,0.0129;AMR_AF=0.9741,0.013;AN=5008;CS=DUP_uwash;EAS_AF=0.997,0.002;END=48880554;EUR_AF=0.9364,0.0437;NS=2504;SAS_AF=0.9581,0.0337;SITEPOST=1;SVTYPE=CNV	GT	1|2
10	49289919	DUP_uwash_chr10_49289919_49390675	G	<CN2>,<CN3>	.	PASS	AC=4858,108;AF=0.970048,0.0215655;AFR_AF=0.9834,0.0129;AMR_AF=0.9741,0.013;AN=5008;CS=DUP_uwash;EAS_AF=0.996,0.003;END=49390675;EUR_AF=0.9364,0.0447;NS=2504;SAS_AF=0.9571,0.0348;SITEPOST=1;SVTYPE=CNV	GT	1|2
10	49917156	DEL_pindel_30939	TAAGAGCACACATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3395;AF=0.677915;AFR_AF=0.643;AMR_AF=0.683;AN=5008;CS=DEL_pindel;EAS_AF=0.7143;END=49917479;EUR_AF=0.6769;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6851;SITEPOST=0.9557;SVTYPE=DEL_ALU	GT	1|0
10	50278015	DEL_pindel_30953	CGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATCAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATATG	C	.	PASS	AC=1645;AF=0.328474;AFR_AF=0.4614;AMR_AF=0.3559;AN=5008;CS=DEL_pindel;EAS_AF=0.2679;END=50278332;EUR_AF=0.2525;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2699;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	1|1
10	51003249	YL_CN_ITU_2393	T	<CN0>	100	PASS	AC=157;AF=0.0313498;AFR_AF=0.0053;AMR_AF=0.0562;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=51011181;EUR_AF=0.0875;MC=BI_GS_DEL1_B3_P1739_2,EM_DL_DEL10671,UW_VH_2237,SI_BD_10591;NS=2504;SAS_AF=0.0235;SVTYPE=DEL	GT	0|1
10	51300882	DUP_uwash_chr10_51300882_51397654	C	<CN2>,<CN3>	.	PASS	AC=4985,23;AF=0.995407,0.00459265;AFR_AF=0.9841,0.0159;AMR_AF=0.9971,0.0029;AN=5008;CS=DUP_uwash;EAS_AF=1,0;END=51397654;EUR_AF=1,0;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
10	51600129	DUP_uwash_chr10_51600129_51694240	T	<CN2>,<CN3>	.	PASS	AC=4983,23;AF=0.995008,0.00459265;AFR_AF=0.9834,0.0159;AMR_AF=0.9957,0.0029;AN=5008;CS=DUP_uwash;EAS_AF=1,0;END=51694240;EUR_AF=1,0;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
10	54466942	ALU_umary_ALU_7961	C	<INS:ME:ALU>	.	.	AC=1715;AF=0.342452;AFR_AF=0.1415;AMR_AF=0.4222;AN=5008;CS=ALU_umary;EAS_AF=0.4415;EUR_AF=0.4115;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.3845;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGTGTCCTTTC	GT	1|1
10	54805970	ALU_umary_ALU_7967	T	<INS:ME:ALU>	.	.	AC=1642;AF=0.327875;AFR_AF=0.1929;AMR_AF=0.3458;AN=5008;CS=ALU_umary;EAS_AF=0.4623;EUR_AF=0.3917;MEINFO=AluUndef,1,274,-;NS=2504;SAS_AF=0.2935;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=CACTTTCAAGAATTT	GT	0|1
10	54860810	DEL_pindel_31011	ACCCGATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGC	A	.	PASS	AC=3414;AF=0.681709;AFR_AF=0.7617;AMR_AF=0.6268;AN=5008;CS=DEL_pindel;EAS_AF=0.5823;END=54861129;EUR_AF=0.7227;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.6728;SITEPOST=0.9811;SVTYPE=DEL_ALU	GT	1|0
10	55983295	ALU_umary_ALU_7970	T	<INS:ME:ALU>	.	.	AC=979;AF=0.195487;AFR_AF=0.1407;AMR_AF=0.245;AN=5008;CS=ALU_umary;EAS_AF=0.0754;EUR_AF=0.3479;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2014;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=ACTTTTCCTTCTTTT	GT	1|0
10	56664659	ALU_umary_ALU_7975	G	<INS:ME:ALU>	.	.	AC=493;AF=0.0984425;AFR_AF=0.0038;AMR_AF=0.1628;AN=5008;CS=ALU_umary;EAS_AF=0.1776;EUR_AF=0.1054;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.092;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAAACAAAAAGG	GT	1|0
10	57702025	DEL_pindel_31064	TGACTTATTCTAATTTCATGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2133;AF=0.425919;AFR_AF=0.3026;AMR_AF=0.451;AN=5008;CS=DEL_pindel;EAS_AF=0.5437;END=57702365;EUR_AF=0.4493;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4294;SITEPOST=0.9957;SVTYPE=DEL_ALU	GT	1|0
10	57974632	ALU_umary_ALU_7984	T	<INS:ME:ALU>	.	.	AC=2108;AF=0.420927;AFR_AF=0.4652;AMR_AF=0.4251;AN=5008;CS=ALU_umary;EAS_AF=0.4018;EUR_AF=0.4374;MEINFO=AluYa5b2,1,281,+;NS=2504;SAS_AF=0.3609;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AATAAGAATTTTTTT	GT	0|1
10	59256852	YL_CN_TSI_2347	G	<CN0>	100	PASS	AC=4198;AF=0.838259;AFR_AF=0.7496;AMR_AF=0.7608;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.996;END=59258100;EUR_AF=0.8012;NS=2504;SAS_AF=0.8885;SVTYPE=DEL	GT	0|1
10	60984921	ALU_umary_ALU_8005	G	<INS:ME:ALU>	.	.	AC=2238;AF=0.446885;AFR_AF=0.2693;AMR_AF=0.5187;AN=5008;CS=ALU_umary;EAS_AF=0.5516;EUR_AF=0.5328;MEINFO=AluYa4_2,3,281,+;NS=2504;SAS_AF=0.4397;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAGAAATGAAAATAGAGG	GT	1|1
10	61365481	DEL_pindel_31133	GTCATCCAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=3494;AF=0.697684;AFR_AF=0.6755;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.7133;END=61365800;EUR_AF=0.7237;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.6912;SITEPOST=0.9303;SVTYPE=DEL_ALU	GT	1|1
10	62124858	ALU_umary_ALU_8012	T	<INS:ME:ALU>	.	.	AC=1586;AF=0.316693;AFR_AF=0.205;AMR_AF=0.2536;AN=5008;CS=ALU_umary;EAS_AF=0.3065;EUR_AF=0.4026;MEINFO=AluUndef,25,266,+;NS=2504;SAS_AF=0.4346;SITEPOST=1;SVLEN=241;SVTYPE=ALU;TSD=AAAAAATAGATGCT	GT	0|1
10	63743614	DEL_pindel_31169	CCCCCTTTTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCG	C	.	PASS	AC=2300;AF=0.459265;AFR_AF=0.444;AMR_AF=0.415;AN=5008;CS=DEL_pindel;EAS_AF=0.5179;END=63743792;EUR_AF=0.5089;MEINFO=AluYb,154,281,-;NS=2504;SAS_AF=0.3998;SITEPOST=0.9991;SVTYPE=DEL_ALU	GT	0|1
10	65509251	BI_GS_DEL1_B1_P1753_367	T	<CN0>	100	PASS	AC=754;AF=0.150559;AFR_AF=0.2171;AMR_AF=0.1758;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.005;END=65511405;EUR_AF=0.2266;MC=SI_BD_10671,UW_VH_849,YL_CN_TSI_2351,EM_DL_DEL11215,YL_CN_GIH_1926;NS=2504;SAS_AF=0.1145;SVTYPE=DEL	GT	1|0
10	66837069	ALU_umary_ALU_8032	T	<INS:ME:ALU>	.	.	AC=1969;AF=0.393171;AFR_AF=0.3691;AMR_AF=0.3069;AN=5008;CS=ALU_umary;EAS_AF=0.4534;EUR_AF=0.3678;MEINFO=AluYa5,1,266,-;NS=2504;SAS_AF=0.4509;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=TCAATGAGTTTTTTT	GT	1|1
10	67306908	BI_GS_DEL1_B4_P1755_54	G	<CN0>	100	PASS	AC=1151;AF=0.229832;AFR_AF=0.0151;AMR_AF=0.3156;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.3829;END=67315294;EUR_AF=0.3012;MC=UW_VH_11605,UW_VH_4980,EM_DL_DEL11438,UW_VH_2323,UW_VH_10998,UW_VH_14447,UW_VH_18168,UW_VH_4746,YL_CN_ACB_2773,UW_VH_3866;NS=2504;SAS_AF=0.228;SVTYPE=DEL	GT	1|1
10	68336769	ALU_umary_ALU_8051	T	<INS:ME:ALU>	.	.	AC=936;AF=0.186901;AFR_AF=0.1301;AMR_AF=0.2392;AN=5008;CS=ALU_umary;EAS_AF=0.0605;EUR_AF=0.3539;MEINFO=AluUndef,1,255,-;NS=2504;SAS_AF=0.1851;SITEPOST=1;SVLEN=254;SVTYPE=ALU;TSD=CTTAACTTTTT	GT	0|1
10	70234960	SVA_umary_SVA_450	T	<INS:ME:SVA>	.	.	AC=317;AF=0.0632987;AFR_AF=0.0091;AMR_AF=0.0908;AN=5008;CS=SVA_umary;EAS_AF=0.0754;EUR_AF=0.0507;MEINFO=SVA,384,1611,-;NS=2504;SAS_AF=0.1176;SITEPOST=1;SVLEN=1227;SVTYPE=SVA;TSD=TTTTTGTTTGTTT	GT	0|1
10	70272096	DEL_pindel_31296	TAAAGATAAATGATATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1158;AF=0.23123;AFR_AF=0.3011;AMR_AF=0.2046;AN=5008;CS=DEL_pindel;EAS_AF=0.12;END=70272418;EUR_AF=0.164;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3395;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	1|0
10	71314957	DEL_pindel_31318	ATATATATACATATATGTGTATATATATATATATGTATATATGTATATATATATGTATATATGTATATATATATATGTATATATGTATATATATATATGTGTATATATG	A	.	PASS	AC=3210;AF=0.640974;AFR_AF=0.5787;AMR_AF=0.6441;AN=5008;CS=DEL_pindel;EAS_AF=0.6577;END=71315065;EUR_AF=0.6511;NS=2504;SAS_AF=0.6953;SITEPOST=0.9129;SVTYPE=DEL	GT	1|1
10	73256581	DEL_pindel_31354	GGTGTACAGATGGACAGTTGGGATGTCAAAAGGGCTACAGGTGATTCTAAGCTGCAGCCAGGGCTGAAATGACCCTTTGTTGCACTGGGACAGAGGCCCAAGACGGAAGGGATGCCCCGGA	G	.	PASS	AC=2497;AF=0.498602;AFR_AF=0.4849;AMR_AF=0.4222;AN=5008;CS=DEL_pindel;EAS_AF=0.5526;END=73256701;EUR_AF=0.6402;NS=2504;SAS_AF=0.3701;SITEPOST=0.9999;SVTYPE=DEL	GT	1|0
10	78255575	BI_GS_DEL1_B2_P1766_196	C	<CN0>	100	PASS	AC=2669;AF=0.532947;AFR_AF=0.3676;AMR_AF=0.6153;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4226;END=78261021;EUR_AF=0.8072;MC=EM_DL_DEL11733,YL_CN_JPT_2630,SI_BD_10751,UW_VH_4267;NS=2504;SAS_AF=0.5297;SVTYPE=DEL	GT	1|1
10	78800902	DEL_pindel_31433	GCTAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=3081;AF=0.615216;AFR_AF=0.6172;AMR_AF=0.647;AN=5008;CS=DEL_pindel;EAS_AF=0.5655;END=78801221;EUR_AF=0.6511;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.6043;SITEPOST=0.9566;SVTYPE=DEL_ALU	GT	1|0
10	81188158	DEL_pindel_31473	TGCAAGATAAATTTCAGTTTTGCAAGATAAATTTCAGTTTTGCAAGATAAATTTCAGTTTTGCAAGATAAATTTCAG	T	.	PASS	AC=279;AF=0.0557109;AFR_AF=0.0666;AMR_AF=0.0533;AN=5008;CS=DEL_pindel;EAS_AF=0.0069;END=81188234;EUR_AF=0.1193;NS=2504;SAS_AF=0.0276;SITEPOST=0.9914;SVTYPE=DEL	GT	0|1
10	82904660	BI_GS_DEL1_B3_P1770_31	A	<CN0>	100	PASS	AC=2572;AF=0.513578;AFR_AF=0.4259;AMR_AF=0.5821;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3472;END=82904914;EUR_AF=0.7326;MC=UW_VH_852;NS=2504;SAS_AF=0.5297;SVTYPE=DEL	GT	0|1
10	84237972	DEL_pindel_31516	TTGGCTTGTGTCACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCGGAAAGGTGGGGAAAAGATTGAGAAATCCGA	T	.	PASS	AC=2304;AF=0.460064;AFR_AF=0.3185;AMR_AF=0.4914;AN=5008;CS=DEL_pindel;EAS_AF=0.4544;END=84238465;EUR_AF=0.5288;MEINFO=SVA_F,1222,1627,-;NS=2504;SAS_AF=0.5644;SITEPOST=0.9948;SVTYPE=DEL_SVA	GT	0|1
10	84400756	DEL_pindel_31521	TCAGTCTGTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAG	T	.	PASS	AC=3585;AF=0.715855;AFR_AF=0.7572;AMR_AF=0.6599;AN=5008;CS=DEL_pindel;EAS_AF=0.7312;END=84400905;EUR_AF=0.7038;MEINFO=AluY,181,281,-;NS=2504;SAS_AF=0.6963;SITEPOST=0.9674;SVTYPE=DEL_ALU	GT	1|0
10	85522725	UW_VH_2400	T	<CN0>	100	PASS	AC=397;AF=0.0792732;AFR_AF=0.0166;AMR_AF=0.0533;AN=5008;CIEND=0,388;CIPOS=-572,0;CS=DEL_union;EAS_AF=0.1121;END=85523932;EUR_AF=0.0924;MC=BI_GS_DEL1_B2_P1773_356;NS=2504;SAS_AF=0.135;SVTYPE=DEL	GT	0|1
10	85626217	DEL_pindel_31536	TAAAAGAGACCTTGGGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3197;AF=0.638379;AFR_AF=0.674;AMR_AF=0.6427;AN=5008;CS=DEL_pindel;EAS_AF=0.6825;END=85626424;EUR_AF=0.5437;MEINFO=AluY,129,281,+;NS=2504;SAS_AF=0.6391;SITEPOST=0.9875;SVTYPE=DEL_ALU	GT	1|1
10	88666175	DEL_pindel_31583	TTAAAACACTTTGTCCTTTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGCCAGGAGATCGAGACCATACTGGCTAACATGGTGAAACTCCGTCTCTACCAAAAATACAAAAAAAGAAATTAGCCAGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGGATGGCGTGAATCCGGGAGGCGGAGCTTGCAGTGAGCCGACATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2238;AF=0.446885;AFR_AF=0.5522;AMR_AF=0.3386;AN=5008;CS=DEL_pindel;EAS_AF=0.5575;END=88666515;EUR_AF=0.3221;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.3957;SITEPOST=0.9908;SVTYPE=DEL_ALU	GT	0|1
10	89079429	DUP_gs_CNV_10_89079429_89114090	T	<CN0>,<CN2>	.	PASS	AC=207,146;AF=0.0413339,0.0291534;AFR_AF=0.0363,0.034;AMR_AF=0.0245,0.0173;AN=5008;CS=DUP_gs;EAS_AF=0.0188,0.0228;END=89114090;EUR_AF=0.0517,0.0199;NS=2504;SAS_AF=0.0726,0.047;SITEPOST=1;SVTYPE=CNV	GT	2|0
10	91547384	DEL_pindel_31634	TATGAGTAAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGTCC	T	.	PASS	AC=3711;AF=0.741014;AFR_AF=0.767;AMR_AF=0.7176;AN=5008;CS=DEL_pindel;EAS_AF=0.7192;END=91547720;EUR_AF=0.7256;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7607;SITEPOST=0.91845;SVTYPE=DEL_ALU	GT	0|1
10	91809911	DEL_pindel_31641	TAAAAATTTTTTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCCGGCTAAAACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	.	PASS	AC=1328;AF=0.265176;AFR_AF=0.3215;AMR_AF=0.2882;AN=5008;CS=DEL_pindel;EAS_AF=0.2331;END=91810221;EUR_AF=0.1581;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.316;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	0|1
10	92969225	DEL_pindel_31659	AAAAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCAACAGAGCGAGACTCCGTCTCGAAGAAAAAAAAAGAAAAAAAAAAAAAAAAAAAGAAAAACGAAG	A	.	PASS	AC=4021;AF=0.802915;AFR_AF=0.8389;AMR_AF=0.7911;AN=5008;CS=DEL_pindel;EAS_AF=0.7857;END=92969563;EUR_AF=0.7823;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.8016;SITEPOST=0.9735;SVTYPE=DEL_ALU	GT	1|1
10	93633333	BI_GS_DEL1_B1_P1781_567	T	<CN0>	100	PASS	AC=3024;AF=0.603834;AFR_AF=0.4902;AMR_AF=0.5562;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.748;END=93634563;EUR_AF=0.497;MC=SI_BD_10837,EM_DL_DEL10132067,YL_CN_CEU_3124,UW_VH_857,YL_CN_STU_2455;NS=2504;SAS_AF=0.7526;SVTYPE=DEL	GT	1|1
10	94134432	YL_CN_ACB_2804	C	<CN0>	100	PASS	AC=3877;AF=0.774161;AFR_AF=0.6989;AMR_AF=0.817;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8313;END=94137766;EUR_AF=0.8072;NS=2504;SAS_AF=0.7526;SVTYPE=DEL	GT	0|1
10	95545481	UW_VH_1955	A	<CN0>	100	PASS	AC=3789;AF=0.756589;AFR_AF=0.2988;AMR_AF=0.9107;AN=5008;CIEND=0,425;CIPOS=-544,0;CS=DEL_union;EAS_AF=0.9137;END=95546492;EUR_AF=0.9384;MC=BI_GS_DEL1_B1_P1783_500,UW_VH_21039,SI_BD_10850,UW_VH_4927,EM_DL_DEL10132642;NS=2504;SAS_AF=0.9172;SVTYPE=DEL	GT	1|1
10	96251541	DEL_pindel_31719	TTCAAAGAACCCTTATTTTATTAGTAATGCCCCCAAAGCTTAAGAGTAGTGGTGCTGACAATTCAGATATGCCAAAGAGAAGCTGTAAAGTTCCTCCTTTAAGCAAAAAGGTGAAAGTTCTCAAATTAATAAGAAAAAAAAATCATATGCTGAAGTTGCTAAGATCTGTGGTAAGAA	T	.	PASS	AC=933;AF=0.186302;AFR_AF=0.0469;AMR_AF=0.1556;AN=5008;CS=DEL_pindel;EAS_AF=0.3978;END=96251717;EUR_AF=0.1849;NS=2504;SAS_AF=0.18;SITEPOST=1;SVTYPE=DEL	GT	0|1
10	99034741	SI_BD_10860	C	<CN0>	100	PASS	AC=4355;AF=0.869609;AFR_AF=0.7481;AMR_AF=0.9366;AN=5008;CIEND=-50,220;CIPOS=-220,127;CS=DEL_union;EAS_AF=0.9583;END=99037238;EUR_AF=0.8857;MC=UW_VH_3682;NS=2504;SAS_AF=0.8783;SVTYPE=DEL	GT	1|1
10	100025125	BI_GS_DEL1_B5_P1788_39	G	<CN0>	100	PASS	AC=1349;AF=0.269369;AFR_AF=0.2829;AMR_AF=0.2133;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2153;END=100025464;EUR_AF=0.3201;NS=2504;SAS_AF=0.2945;SVTYPE=DEL	GT	0|1
10	103394011	BI_GS_DEL1_B5_P1791_417	C	<CN0>	100	PASS	AC=339;AF=0.0676917;AFR_AF=0.1437;AMR_AF=0.0418;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.004;END=103395092;EUR_AF=0.0795;MC=SI_BD_10877,UW_VH_2894,EM_DL_DEL10135415;NS=2504;SAS_AF=0.0368;SVTYPE=DEL	GT	1|0
10	105817214	ALU_umary_ALU_8203	C	<INS:ME:ALU>	.	.	AC=2197;AF=0.438698;AFR_AF=0.3192;AMR_AF=0.4827;AN=5008;CS=ALU_umary;EAS_AF=0.4435;EUR_AF=0.498;MEINFO=AluUndef,105,280,+;NS=2504;SAS_AF=0.5031;SITEPOST=1;SVLEN=175;SVTYPE=ALU;TSD=AAAAGATTGCCTCCTTC	GT	1|1
10	106566893	ALU_umary_ALU_8208	T	<INS:ME:ALU>	.	.	AC=404;AF=0.0806709;AFR_AF=0.0408;AMR_AF=0.1023;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.1779;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1022;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGACTGTTGCTTTT	GT	1|1
10	107252997	BI_GS_DEL1_B3_P1795_12	T	<CN0>	100	PASS	AC=3044;AF=0.607827;AFR_AF=0.4206;AMR_AF=0.6383;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8958;END=107253348;EUR_AF=0.659;MC=UW_VH_862,DEL_pindel_31934;NS=2504;SAS_AF=0.4898;SVTYPE=DEL	GT	1|1
10	107891561	ALU_umary_ALU_8215	T	<INS:ME:ALU>	.	.	AC=2924;AF=0.583866;AFR_AF=0.4493;AMR_AF=0.621;AN=5008;CS=ALU_umary;EAS_AF=0.6349;EUR_AF=0.661;MEINFO=AluYc1,14,281,-;NS=2504;SAS_AF=0.6074;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=GGAGCACACGTTTTT	GT	1|1
10	107950652	UW_VH_863	G	<CN0>	100	PASS	AC=3257;AF=0.650359;AFR_AF=0.1982;AMR_AF=0.7781;AN=5008;CIEND=0,592;CIPOS=-468,0;CS=DEL_union;EAS_AF=0.8492;END=107951600;EUR_AF=0.828;MC=EM_DL_DEL10137398,DEL_pindel_31954,YL_CN_STU_2469,SI_BD_10898;NS=2504;SAS_AF=0.7832;SVTYPE=DEL	GT	1|1
10	108991284	ALU_umary_ALU_8222	T	<INS:ME:ALU>	.	.	AC=2554;AF=0.509984;AFR_AF=0.4221;AMR_AF=0.5043;AN=5008;CS=ALU_umary;EAS_AF=0.5635;EUR_AF=0.5149;MEINFO=AluYa5,1,277,-;NS=2504;SAS_AF=0.5726;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=GCATATTACACATTTT	GT	0|1
10	112177753	L1_umary_LINE1_2023	T	<INS:ME:LINE1>	.	.	AC=1583;AF=0.316094;AFR_AF=0.3964;AMR_AF=0.2666;AN=5008;CS=L1_umary;EAS_AF=0.374;EUR_AF=0.2525;MEINFO=LINE1,5219,5839,-;NS=2504;SAS_AF=0.2485;SITEPOST=1;SVLEN=620;SVTYPE=LINE1;TSD=null	GT	1|0
10	114073874	ALU_umary_ALU_8239	G	<INS:ME:ALU>	.	.	AC=1886;AF=0.376597;AFR_AF=0.205;AMR_AF=0.3689;AN=5008;CS=ALU_umary;EAS_AF=0.4812;EUR_AF=0.4254;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.456;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAACAGAAATAAAATATTGAGTTTCTG	GT	1|1
10	114112179	BI_GS_DEL1_B2_P1802_90	C	<CN0>	100	PASS	AC=2247;AF=0.448682;AFR_AF=0.2829;AMR_AF=0.4006;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6429;END=114116659;EUR_AF=0.4095;MC=UW_VH_19467,UW_VH_5737,UW_VH_7188,YL_CN_CLM_2158,UW_VH_2156,UW_VH_21091,UW_VH_3030,UW_VH_13735,EM_DL_DEL12578,UW_VH_7819,UW_VH_14453,UW_VH_21129,UW_VH_1952,SI_BD_10926;NS=2504;SAS_AF=0.547;SVTYPE=DEL	GT	1|1
10	114157784	DEL_pindel_32084	TACAGATCCACTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3325;AF=0.663938;AFR_AF=0.6097;AMR_AF=0.6945;AN=5008;CS=DEL_pindel;EAS_AF=0.7073;END=114158122;EUR_AF=0.6799;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.6544;SITEPOST=0.9739;SVTYPE=DEL_ALU	GT	1|1
10	117711613	BI_GS_DEL1_B5_P1805_734	A	<CN0>	100	PASS	AC=2190;AF=0.4373;AFR_AF=0.2943;AMR_AF=0.5159;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5159;END=117711999;EUR_AF=0.5805;MC=UW_VH_867,DEL_pindel_32138;NS=2504;SAS_AF=0.3466;SVTYPE=DEL	GT	1|0
10	119219112	DEL_pindel_32161	TAAAACATGAGGCCAGGCGGCCGGGCCTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGGTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCTGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAACAAACAAACAAACAAAAAAAAAAACAA	T	.	PASS	AC=288;AF=0.057508;AFR_AF=0.0091;AMR_AF=0.1138;AN=5008;CS=DEL_pindel;EAS_AF=0.1042;END=119219450;EUR_AF=0.0368;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.0562;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|0
10	119634274	DEL_pindel_32169	TGAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=4028;AF=0.804313;AFR_AF=0.7716;AMR_AF=0.8329;AN=5008;CS=DEL_pindel;EAS_AF=0.8304;END=119634605;EUR_AF=0.7903;MEINFO=AluYb9,1,281,-;NS=2504;SAS_AF=0.816;SITEPOST=0.9728;SVTYPE=DEL_ALU	GT	1|1
10	121046814	DEL_pindel_32196	AAGGAAGGGAGGGAGAGAGGGAGGGAGGAAGGGAGAGAGGAGGAAGGGAAGG	A	.	PASS	AC=2897;AF=0.578474;AFR_AF=0.556;AMR_AF=0.585;AN=5008;CS=DEL_pindel;EAS_AF=0.6071;END=121046865;EUR_AF=0.5567;NS=2504;SAS_AF=0.5971;SITEPOST=0.9627;SVTYPE=DEL	GT	0|1
10	122226691	SI_BD_10957	C	<CN0>	100	PASS	AC=3669;AF=0.732628;AFR_AF=0.4228;AMR_AF=0.8444;AN=5008;CIEND=-101,331;CIPOS=-331,50;CS=DEL_union;EAS_AF=0.9117;END=122228857;EUR_AF=0.825;MC=UW_VH_870,UW_VH_18997,YL_CN_MSL_2327,YL_CN_LWK_2397,EM_DL_DEL12717;NS=2504;SAS_AF=0.7924;SVTYPE=DEL	GT	1|1
10	122701143	BI_GS_DEL1_B5_P1810_938	G	<CN0>	100	PASS	AC=2264;AF=0.452077;AFR_AF=0.7186;AMR_AF=0.3588;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1498;END=122701437;EUR_AF=0.4831;NS=2504;SAS_AF=0.4376;SVTYPE=DEL	GT	1|0
10	124216824	UW_VH_871	A	<CN0>	100	PASS	AC=1466;AF=0.292732;AFR_AF=0.2632;AMR_AF=0.2478;AN=5008;CIEND=0,510;CIPOS=-362,0;CS=DEL_union;EAS_AF=0.4127;END=124217266;EUR_AF=0.1958;MC=BI_GS_DEL1_B5_P1812_262;NS=2504;SAS_AF=0.3405;SVTYPE=DEL	GT	0|1
10	127190584	CINV_delly_INV00014710	C	<INV>	.	PASS	AC=2098;AF=0.41893;AFR_AF=0.0946;AMR_AF=0.4611;AN=5008;CIEND=-217,217;CIPOS=-217,217;CS=CINV_delly;EAS_AF=0.502;END=127197225;EUR_AF=0.664;IMPRECISE;NS=2504;SAS_AF=0.4898;SVTYPE=INV	GT	0|1
10	128106472	DEL_pindel_32332	TAAAAATGATTACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3490;AF=0.696885;AFR_AF=0.6823;AMR_AF=0.6916;AN=5008;CS=DEL_pindel;EAS_AF=0.7222;END=128106786;EUR_AF=0.6849;MEINFO=AluYa4b,1,281,+;NS=2504;SAS_AF=0.7065;SITEPOST=0.9634;SVTYPE=DEL_ALU	GT	0|1
10	128616069	ALU_umary_ALU_8306	C	<INS:ME:ALU>	.	.	AC=4392;AF=0.876997;AFR_AF=0.8669;AMR_AF=0.8732;AN=5008;CS=ALU_umary;EAS_AF=0.8879;EUR_AF=0.8787;MEINFO=AluUndef,36,275,+;NS=2504;SAS_AF=0.8804;SITEPOST=0.9994;SVLEN=239;SVTYPE=ALU;TSD=null	GT	1|1
10	129373595	ALU_umary_ALU_8309	T	<INS:ME:ALU>	.	.	AC=941;AF=0.187899;AFR_AF=0.1339;AMR_AF=0.1859;AN=5008;CS=ALU_umary;EAS_AF=0.2639;EUR_AF=0.169;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.2035;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGGAATAACCTTTT	GT	0|1
10	129565302	DEL_pindel_32357	TTAGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3848;AF=0.768371;AFR_AF=0.7557;AMR_AF=0.7421;AN=5008;CS=DEL_pindel;EAS_AF=0.8095;END=129565608;EUR_AF=0.7584;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.772;SITEPOST=0.96835;SVTYPE=DEL_ALU	GT	1|1
10	132372179	DEL_pindel_32404	GCCAGGCAAGTTCTAGTTAGAAGTTTCGAGCTCTCTCAAGCAAAGATTTTCTTTGCATAGGAAACAATTTACCGGAGGAATAAAGGGTGCAGCCCTTTCCTCCCCGGACTTCTAGAGAGGAGCAGATCAGAAGACAGCGTGAAGCT	G	.	PASS	AC=1731;AF=0.345647;AFR_AF=0.1762;AMR_AF=0.3746;AN=5008;CS=DEL_pindel;EAS_AF=0.2698;END=132372324;EUR_AF=0.5934;NS=2504;SAS_AF=0.3773;SITEPOST=0.9997;SVTYPE=DEL	GT	1|0
10	132858471	DEL_pindel_32427	TCCTCACGCGCATTTTCTTTTTTTTTTTTTTCTTTTTTTTTTTTTTCTTTTTTTTTTTTTCTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=2651;AF=0.529353;AFR_AF=0.6188;AMR_AF=0.5259;AN=5008;CS=DEL_pindel;EAS_AF=0.5099;END=132858820;EUR_AF=0.4901;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.4714;SITEPOST=0.9941;SVTYPE=DEL_ALU	GT	0|1
10	132988697	BI_GS_DEL1_B5_P1820_1173	C	<CN0>	100	PASS	AC=669;AF=0.133586;AFR_AF=0.2269;AMR_AF=0.1628;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0069;END=132991196;EUR_AF=0.1869;MC=UW_VH_2474,YL_CN_TSI_2412,YL_CN_LWK_2412,EM_DL_DEL12914;NS=2504;SAS_AF=0.0624;SVTYPE=DEL	GT	0|1
10	134136386	DUP_uwash_chr10_134136386_134364854	A	<CN2>	.	PASS	AC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=5008;CS=DUP_uwash;EAS_AF=0;END=134364854;EUR_AF=0.001;NS=2504;SAS_AF=0;SITEPOST=1;SVTYPE=DUP	GT	0|1
10	134151810	DUP_gs_CNV_10_134151810_134179753	A	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.00039936;AFR_AF=0,0;AMR_AF=0,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0,0;END=134179753;EUR_AF=0,0.001;NS=2504;SAS_AF=0,0;SITEPOST=1;SVTYPE=DUP	GT	0|2
10	134183629	DUP_gs_CNV_10_134183629_134212401	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.00019968;AFR_AF=0,0;AMR_AF=0,0;AN=5008;CS=DUP_gs;EAS_AF=0,0;END=134212401;EUR_AF=0,0.001;NS=2504;SAS_AF=0,0;SITEPOST=1;SVTYPE=DUP	GT	0|2
10	134217496	DEL_pindel_32482	TAGGACGGCATTCTCCAGGGCTCCTGCAGGACGGCATTCTCCAGGGCTCCTGC	T	.	PASS	AC=1339;AF=0.267372;AFR_AF=0.3313;AMR_AF=0.2536;AN=5008;CS=DEL_pindel;EAS_AF=0.2768;END=134217548;EUR_AF=0.2197;NS=2504;SAS_AF=0.2301;SITEPOST=0.9947;SVTYPE=DEL	GT	1|0
10	134265395	DUP_gs_CNV_10_134265395_134300021	A	<CN2>	.	PASS	AC=3;AF=0.00059904;AFR_AF=0.0015;AMR_AF=0;AN=5008;CS=DUP_gs;EAS_AF=0;END=134300021;EUR_AF=0.001;NS=2504;SAS_AF=0;SITEPOST=0.6237;SVTYPE=DUP	GT	1|0
10	134317241	DUP_gs_CNV_10_134317241_134362349	A	<CN2>	.	PASS	AC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=5008;CS=DUP_gs;EAS_AF=0;END=134362349;EUR_AF=0.001;NS=2504;SAS_AF=0;SITEPOST=1;SVTYPE=DUP	GT	0|1
11	677313	BI_GS_DEL1_B5_P1824_334	A	<CN0>	100	PASS	AC=2639;AF=0.526957;AFR_AF=0.2927;AMR_AF=0.5317;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7202;END=677769;EUR_AF=0.5716;NS=2504;SAS_AF=0.5951;SVTYPE=DEL	GT	1|1
11	4907963	ALU_umary_ALU_8343	T	<INS:ME:ALU>	.	.	AC=765;AF=0.152756;AFR_AF=0.0189;AMR_AF=0.1527;AN=5008;CS=ALU_umary;EAS_AF=0.0585;EUR_AF=0.2853;MEINFO=AluUndef,61,281,-;NS=2504;SAS_AF=0.2945;SITEPOST=1;SVLEN=220;SVTYPE=ALU;TSD=AAAAGACTTTATTTTT	GT	1|1
11	4968456	DUP_gs_CNV_11_4968456_4975835	A	<CN0>,<CN2>	.	PASS	AC=1624,165;AF=0.324281,0.0329473;AFR_AF=0.2496,0.0983;AMR_AF=0.4798,0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.3194,0.0278;END=4975835;EUR_AF=0.3907,0;MC=UW_VH_15458,YL_CN_MXL_2164,SI_BD_11158,UW_VH_2812,UW_VH_14805;NS=2504;SAS_AF=0.2515,0.001;SITEPOST=1;SVTYPE=CNV	GT	1|0
11	4972926	EM_DL_DEL10154711	T	<CN0>	100	PASS	AC=1561;AF=0.311701;AFR_AF=0.2126;AMR_AF=0.4755;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3095;END=4973837;EUR_AF=0.3897;NS=2504;SAS_AF=0.2515;SVTYPE=DEL	GT	1|0
11	5106964	DEL_pindel_32701	TAAAGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3429;AF=0.684704;AFR_AF=0.8041;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.5565;END=5107211;EUR_AF=0.6799;MEINFO=AluYc1,58,281,+;NS=2504;SAS_AF=0.6728;SITEPOST=0.9983;SVTYPE=DEL_ALU	GT	0|1
11	5521609	UW_VH_1531	T	<CN0>	100	PASS	AC=429;AF=0.0856629;AFR_AF=0.0098;AMR_AF=0.1599;AN=5008;CIEND=0,403;CIPOS=-447,0;CS=DEL_union;EAS_AF=0.0744;END=5523196;EUR_AF=0.164;MC=EM_DL_DEL10154883,SI_BD_11162,YL_CN_PUR_3090,BI_GS_DEL1_B1_P1829_437,YL_CN_PEL_2285;NS=2504;SAS_AF=0.0665;SVTYPE=DEL	GT	1|0
11	5885149	ALU_umary_ALU_8351	G	<INS:ME:ALU>	.	.	AC=1466;AF=0.292732;AFR_AF=0.2481;AMR_AF=0.33;AN=5008;CS=ALU_umary;EAS_AF=0.3056;EUR_AF=0.341;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.2638;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGAGATTGTGTG	GT	0|1
11	6881402	BI_GS_DEL1_B1_P1830_837	C	<CN0>	100	PASS	AC=1935;AF=0.386382;AFR_AF=0.3192;AMR_AF=0.3127;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3631;END=6881922;EUR_AF=0.5;MC=SI_BD_11170;NS=2504;SAS_AF=0.4366;SVTYPE=DEL	GT	1|1
11	7092800	ALU_umary_ALU_8359	T	<INS:ME:ALU>	.	.	AC=2657;AF=0.530551;AFR_AF=0.3971;AMR_AF=0.4914;AN=5008;CS=ALU_umary;EAS_AF=0.6528;EUR_AF=0.5149;MEINFO=AluYb7_2,1,281,+;NS=2504;SAS_AF=0.6288;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAATGCAGGT	GT	1|0
11	7428579	DEL_pindel_32733	TTTAAGTCTATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1552;AF=0.309904;AFR_AF=0.5469;AMR_AF=0.2161;AN=5008;CS=DEL_pindel;EAS_AF=0.1925;END=7428910;EUR_AF=0.3221;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.1646;SITEPOST=0.9987;SVTYPE=DEL_ALU	GT	0|1
11	7716903	DEL_pindel_32740	TAAGAATGGATGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4025;AF=0.803714;AFR_AF=0.7012;AMR_AF=0.8314;AN=5008;CS=DEL_pindel;EAS_AF=0.8214;END=7717219;EUR_AF=0.8728;MEINFO=AluYa4_3,1,281,+;NS=2504;SAS_AF=0.8333;SITEPOST=0.9799;SVTYPE=DEL_ALU	GT	1|1
11	8326057	DEL_pindel_32752	TAAGAATTGGTCGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2158;AF=0.430911;AFR_AF=0.2829;AMR_AF=0.5548;AN=5008;CS=DEL_pindel;EAS_AF=0.4315;END=8326195;EUR_AF=0.4742;MEINFO=AluYb,171,281,+;NS=2504;SAS_AF=0.498;SITEPOST=0.9894;SVTYPE=DEL_ALU	GT	1|1
11	8839663	SVA_umary_SVA_486	G	<INS:ME:SVA>	.	.	AC=1299;AF=0.259385;AFR_AF=0.1392;AMR_AF=0.3271;AN=5008;CS=SVA_umary;EAS_AF=0.3065;EUR_AF=0.3588;MEINFO=SVA,39,1621,+;NS=2504;SAS_AF=0.2229;SITEPOST=1;SVLEN=1582;SVTYPE=SVA;TSD=AAAAATACACAAACTAG	GT	1|0
11	9323626	BI_GS_DEL1_B1_P1833_272	T	<CN0>	100	PASS	AC=2751;AF=0.549321;AFR_AF=0.5666;AMR_AF=0.5216;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.626;END=9324639;EUR_AF=0.5497;MC=EM_DL_DEL10157084,YL_CN_STU_2540,UW_VH_2157,UW_VH_3179,SI_BD_11185,UW_VH_19176;NS=2504;SAS_AF=0.4663;SVTYPE=DEL	GT	1|0
11	10292738	BI_GS_DEL1_B3_P1834_13	T	<CN0>	100	PASS	AC=2051;AF=0.409545;AFR_AF=0.2912;AMR_AF=0.487;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3264;END=10293842;EUR_AF=0.5517;NS=2504;SAS_AF=0.454;SVTYPE=DEL	GT	1|0
11	11948525	SVA_umary_SVA_488	A	<INS:ME:SVA>	.	.	AC=369;AF=0.0736821;AFR_AF=0.0091;AMR_AF=0.1124;AN=5008;CS=SVA_umary;EAS_AF=0.0575;EUR_AF=0.1531;MEINFO=SVA,83,1627,-;NS=2504;SAS_AF=0.0685;SITEPOST=1;SVLEN=1544;SVTYPE=SVA;TSD=CAAGAGTGTGTTGTTTA	GT	1|0
11	12152544	DEL_pindel_32801	GAAAGATCCCAGTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATTCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCACAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	G	.	PASS	AC=2437;AF=0.486621;AFR_AF=0.2761;AMR_AF=0.5692;AN=5008;CS=DEL_pindel;EAS_AF=0.506;END=12152868;EUR_AF=0.5577;MEINFO=AluYb5,1,281,+;NS=2504;SAS_AF=0.6196;SITEPOST=0.9981;SVTYPE=DEL_ALU	GT	0|1
11	12943732	DEL_pindel_32824	TGGTTCTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGC	T	.	PASS	AC=1860;AF=0.371406;AFR_AF=0.3865;AMR_AF=0.3804;AN=5008;CS=DEL_pindel;EAS_AF=0.3948;END=12944009;EUR_AF=0.3976;MEINFO=AluY,34,281,-;NS=2504;SAS_AF=0.2935;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|0
11	13092200	ALU_umary_ALU_8387	C	<INS:ME:ALU>	.	.	AC=296;AF=0.0591054;AFR_AF=0.0242;AMR_AF=0.1297;AN=5008;CS=ALU_umary;EAS_AF=0.004;EUR_AF=0.0984;MEINFO=AluYa4_5,1,263,-;NS=2504;SAS_AF=0.0726;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=ATTAATGTAATTTTC	GT	0|1
11	14348310	DEL_pindel_32841	TAAGAATATGATTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGCAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2733;AF=0.545727;AFR_AF=0.4153;AMR_AF=0.6297;AN=5008;CS=DEL_pindel;EAS_AF=0.5099;END=14348626;EUR_AF=0.6123;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6309;SITEPOST=0.9945;SVTYPE=DEL_ALU	GT	1|0
11	16587158	DEL_pindel_32878	TAAAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAATAAAAAAATAAAAAAATAAATAAATAAATAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4841;AF=0.966653;AFR_AF=0.9153;AMR_AF=0.9813;AN=5008;CS=DEL_pindel;EAS_AF=0.9881;END=16587294;EUR_AF=0.9821;MEINFO=LINE1,5945,6019,+;NS=2504;SAS_AF=0.9877;SITEPOST=1;SVTYPE=DEL_LINE1	GT	1|1
11	16597563	DEL_pindel_32879	TGAAAACCACAACTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3853;AF=0.769369;AFR_AF=0.7421;AMR_AF=0.7651;AN=5008;CS=DEL_pindel;EAS_AF=0.7897;END=16597886;EUR_AF=0.7843;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.773;SITEPOST=0.96365;SVTYPE=DEL_ALU	GT	1|0
11	16996173	BI_GS_DEL1_B2_P1840_657	G	<CN0>	100	PASS	AC=3970;AF=0.792732;AFR_AF=0.7693;AMR_AF=0.8213;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.871;END=16996599;EUR_AF=0.6491;NS=2504;SAS_AF=0.8712;SVTYPE=DEL	GT	0|1
11	19963012	ALU_umary_ALU_8419	G	<INS:ME:ALU>	.	.	AC=960;AF=0.191693;AFR_AF=0.2814;AMR_AF=0.0807;AN=5008;CS=ALU_umary;EAS_AF=0.2857;EUR_AF=0.0944;MEINFO=AluYb8,24,281,-;NS=2504;SAS_AF=0.1524;SITEPOST=1;SVLEN=257;SVTYPE=ALU;TSD=AATAAATAGCATGAGGTTG	GT	0|1
11	22412812	ALU_umary_ALU_8434	A	<INS:ME:ALU>	.	.	AC=523;AF=0.104433;AFR_AF=0.0204;AMR_AF=0.1037;AN=5008;CS=ALU_umary;EAS_AF=0.1776;EUR_AF=0.1074;MEINFO=AluUndef,4,272,+;NS=2504;SAS_AF=0.1401;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAAAACATCTA	GT	0|1
11	22433876	DEL_pindel_32979	CAGACACATAGATCAATGAAACAGAATAGAAAGCCTAGAAATAAATCCACATATTTATAGTTAGTTGATTTTTTGTAAGGGTGCCAAGAACACAAAATGGGGAAAGGACAGTCTCTT	C	.	PASS	AC=621;AF=0.124002;AFR_AF=0.0265;AMR_AF=0.1225;AN=5008;CS=DEL_pindel;EAS_AF=0.2044;END=22433992;EUR_AF=0.1262;NS=2504;SAS_AF=0.1718;SITEPOST=0.9929;SVTYPE=DEL	GT	0|1
11	23012584	DEL_pindel_32985	GATAAAGACAGAAAGAAATCTCATCCTTTTTATACTACCAACAATGTATAATCC	G	.	PASS	AC=319;AF=0.0636981;AFR_AF=0.0265;AMR_AF=0.0937;AN=5008;CS=DEL_pindel;EAS_AF=0.0377;END=23012637;EUR_AF=0.1521;NS=2504;SAS_AF=0.0286;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
11	23313949	DEL_pindel_32997	CATTTATAATTACTTACATCTGTGTTTTATAGTTCACATTGTACAGATCATCTTCTTGGTTAAGTACATTCTTAGAT	C	.	PASS	AC=552;AF=0.110224;AFR_AF=0.0787;AMR_AF=0.1369;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=23314025;EUR_AF=0.1978;NS=2504;SAS_AF=0.1554;SITEPOST=0.9994;SVTYPE=DEL	GT	1|0
11	23522804	ALU_umary_ALU_8440	T	<INS:ME:ALU>	.	.	AC=2529;AF=0.504992;AFR_AF=0.5908;AMR_AF=0.5086;AN=5008;CS=ALU_umary;EAS_AF=0.2827;EUR_AF=0.6272;MEINFO=AluUndef,2,280,+;NS=2504;SAS_AF=0.4898;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AATTGTAATTCATT	GT	1|1
11	25068857	DEL_pindel_33040	TTAAGAATAGTATTGTTTTTATTTTTTTTATTTTTTTTTTTTTTACTTTTTAATTTTCTTTTTTTTATTTTTTTTAATTTTTTTTAATTTTTTTTTTATTATACTC	T	.	PASS	AC=1650;AF=0.329473;AFR_AF=0.3638;AMR_AF=0.3602;AN=5008;CS=DEL_pindel;EAS_AF=0.1617;END=25068962;EUR_AF=0.3857;NS=2504;SAS_AF=0.3763;SITEPOST=0.9993;SVTYPE=DEL	GT	1|0
11	25605138	ALU_umary_ALU_8456	T	<INS:ME:ALU>	.	.	AC=1957;AF=0.390775;AFR_AF=0.0809;AMR_AF=0.4928;AN=5008;CS=ALU_umary;EAS_AF=0.5496;EUR_AF=0.492;MEINFO=AluYb8,1,278,+;NS=2504;SAS_AF=0.4693;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAAAGGAACTTAGTT	GT	1|1
11	25680026	DEL_pindel_33049	ATTGATATGATTTAGATTATGACTTTGCATTTCATGAATTTGTCATTCCTTCCAG	A	.	PASS	AC=1989;AF=0.397165;AFR_AF=0.3873;AMR_AF=0.389;AN=5008;CS=DEL_pindel;EAS_AF=0.3958;END=25680080;EUR_AF=0.3827;NS=2504;SAS_AF=0.4325;SITEPOST=0.9977;SVTYPE=DEL	GT	1|0
11	26679948	DEL_pindel_33081	GTCAGGAGTTCAAGAGCAAAGAGCAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAATAGCCGGGTGCAGTGGCGCATGCCTGTAATCCCAGCTAC	G	.	PASS	AC=1541;AF=0.307708;AFR_AF=0.1687;AMR_AF=0.2378;AN=5008;CS=DEL_pindel;EAS_AF=0.3492;END=26680047;EUR_AF=0.3887;NS=2504;SAS_AF=0.4192;SITEPOST=0.99795;SVTYPE=DEL	GT	0|1
11	27657262	BI_GS_DEL1_B4_P1851_138	A	<CN0>	100	PASS	AC=2047;AF=0.408746;AFR_AF=0.2655;AMR_AF=0.4827;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2857;END=27657596;EUR_AF=0.7018;MC=DEL_pindel_33101;NS=2504;SAS_AF=0.3753;SVTYPE=DEL	GT	0|1
11	29007143	UW_VH_21255	G	<CN0>	100	PASS	AC=2607;AF=0.520567;AFR_AF=0.4402;AMR_AF=0.464;AN=5008;CIEND=0,387;CIPOS=-303,0;CS=DEL_union;EAS_AF=0.4117;END=29012766;EUR_AF=0.6551;MC=EM_DL_DEL14392,BI_GS_DEL1_B1_P1853_5,SI_BD_11287,UW_VH_888,YL_CN_TSI_2467;NS=2504;SAS_AF=0.6431;SVTYPE=DEL	GT	1|0
11	29139370	EM_DL_DEL10165565	A	<CN0>	100	PASS	AC=1660;AF=0.33147;AFR_AF=0.5076;AMR_AF=0.3948;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.2302;END=29140327;EUR_AF=0.1958;MC=UW_VH_21064,UW_VH_11112,UW_VH_3111,BI_GS_DEL1_B4_P1853_26,UW_VH_6293,UW_VH_11356,UW_VH_23284;NS=2504;SAS_AF=0.2924;SVTYPE=DEL	GT	0|1
11	29967582	BI_GS_DEL1_B5_P1853_1126	C	<CN0>	100	PASS	AC=1616;AF=0.322684;AFR_AF=0.3026;AMR_AF=0.2651;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2639;END=29968470;EUR_AF=0.3917;MC=DEL_pindel_33137,SI_BD_11288,EM_DL_DEL10165841;NS=2504;SAS_AF=0.3804;SVTYPE=DEL	GT	1|0
11	31393768	UW_VH_889	T	<CN0>	100	PASS	AC=997;AF=0.199081;AFR_AF=0.0688;AMR_AF=0.2723;AN=5008;CIEND=0,487;CIPOS=-383,0;CS=DEL_union;EAS_AF=0.0516;END=31397650;EUR_AF=0.3807;MC=EM_DL_DEL14433,SI_BD_11293,BI_GS_DEL1_B1_P1855_335,YL_CN_CDX_2202;NS=2504;SAS_AF=0.2883;SVTYPE=DEL	GT	1|0
11	32286640	DEL_pindel_33181	TAAGAAAAGGTCTTCGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2316;AF=0.46246;AFR_AF=0.4493;AMR_AF=0.4395;AN=5008;CS=DEL_pindel;EAS_AF=0.5813;END=32286973;EUR_AF=0.3966;MEINFO=AluYe,2,281,+;NS=2504;SAS_AF=0.4417;SITEPOST=0.999;SVTYPE=DEL_ALU	GT	1|0
11	37121329	DEL_pindel_33248	CCCTTCCTTCCTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTCCTTCCTT	C	.	PASS	AC=907;AF=0.18111;AFR_AF=0.0703;AMR_AF=0.2565;AN=5008;CS=DEL_pindel;EAS_AF=0.0952;END=37121391;EUR_AF=0.3479;NS=2504;SAS_AF=0.1943;SITEPOST=0.9962;SVTYPE=DEL	GT	0|1
11	37544637	ALU_umary_ALU_8518	A	<INS:ME:ALU>	.	.	AC=487;AF=0.0972444;AFR_AF=0.0159;AMR_AF=0.0879;AN=5008;CS=ALU_umary;EAS_AF=0.0982;EUR_AF=0.1531;MEINFO=AluYa5c1,1,281,+;NS=2504;SAS_AF=0.1554;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAATTTTGCTAATTA	GT	1|0
11	37666630	DEL_pindel_33257	TAAAATGTTATACTTCTCTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=827;AF=0.165136;AFR_AF=0.2292;AMR_AF=0.1138;AN=5008;CS=DEL_pindel;EAS_AF=0.1032;END=37666937;EUR_AF=0.1471;MEINFO=AluYb6_2,35,281,+;NS=2504;SAS_AF=0.1973;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|0
11	37706295	ALU_umary_ALU_8520	C	<INS:ME:ALU>	.	.	AC=2994;AF=0.597843;AFR_AF=0.447;AMR_AF=0.5879;AN=5008;CS=ALU_umary;EAS_AF=0.6984;EUR_AF=0.6153;MEINFO=AluYa5,16,281,-;NS=2504;SAS_AF=0.6871;SITEPOST=0.9997;SVLEN=265;SVTYPE=ALU;TSD=null	GT	1|1
11	37962045	DEL_pindel_33268	TAAGAAAATGCTTATTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCTACACGGAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAA	T	.	PASS	AC=712;AF=0.142173;AFR_AF=0.2723;AMR_AF=0.1455;AN=5008;CS=DEL_pindel;EAS_AF=0.0238;END=37962370;EUR_AF=0.162;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.0654;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|0
11	38801075	ALU_umary_ALU_8526	T	<INS:ME:ALU>	.	.	AC=2780;AF=0.555112;AFR_AF=0.5393;AMR_AF=0.5519;AN=5008;CS=ALU_umary;EAS_AF=0.5437;EUR_AF=0.5765;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5685;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAAGTGGTTTATT	GT	1|0
11	41007018	DEL_pindel_33315	ATAAAGAACATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=4077;AF=0.814097;AFR_AF=0.7632;AMR_AF=0.8098;AN=5008;CS=DEL_pindel;EAS_AF=0.8651;END=41007340;EUR_AF=0.8211;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.8262;SITEPOST=0.9898;SVTYPE=DEL_ALU	GT	1|1
11	42464098	DEL_pindel_33341	TGGTTTCTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGAACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=4086;AF=0.815895;AFR_AF=0.6089;AMR_AF=0.8487;AN=5008;CS=DEL_pindel;EAS_AF=0.9633;END=42464409;EUR_AF=0.8231;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.9131;SITEPOST=0.9979;SVTYPE=DEL_ALU	GT	1|0
11	42812829	DUP_gs_CNV_11_42812829_42818734	T	<CN0>,<CN2>	.	PASS	AC=1106,18;AF=0.220847,0.00359425;AFR_AF=0.2073,0.0015;AMR_AF=0.1787,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.2312,0.0099;END=42818734;EUR_AF=0.2376,0.002;MC=YL_CN_TSI_2473,SI_BD_11361,UW_VH_5057,EM_DL_DEL14683,YL_CN_STU_2566,YL_CN_ASW_2662,UW_VH_15297;NS=2504;SAS_AF=0.2413,0.0031;SITEPOST=1;SVTYPE=CNV	GT	0|1
11	43191343	ALU_umary_ALU_8557	T	<INS:ME:ALU>	.	.	AC=1169;AF=0.233427;AFR_AF=0.2927;AMR_AF=0.2983;AN=5008;CS=ALU_umary;EAS_AF=0.1022;EUR_AF=0.2584;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0.2168;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAGAATAATGTT	GT	1|0
11	43891829	DEL_pindel_33366	TAAAATTAGATCAGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGAGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4165;AF=0.831669;AFR_AF=0.8041;AMR_AF=0.8242;AN=5008;CS=DEL_pindel;EAS_AF=0.8403;END=43892165;EUR_AF=0.839;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.8579;SITEPOST=0.9749;SVTYPE=DEL_ALU	GT	1|1
11	43909603	BI_GS_DEL1_B5_P1867_1112	T	<CN0>	100	PASS	AC=2849;AF=0.56889;AFR_AF=0.4697;AMR_AF=0.4438;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7341;END=43909911;EUR_AF=0.67;NS=2504;SAS_AF=0.5174;SVTYPE=DEL	GT	1|1
11	45429848	BI_GS_DEL1_B1_P1869_437	C	<CN0>	100	PASS	AC=2244;AF=0.448083;AFR_AF=0.2844;AMR_AF=0.536;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.374;END=45431615;EUR_AF=0.5199;MC=UW_VH_10237,UW_VH_898,EM_DL_DEL10173011,YL_CN_GWD_3570,YL_CN_ITU_2557,YL_CN_PJL_2680,UW_VH_24822,YL_CN_IBS_2360;NS=2504;SAS_AF=0.6094;SVTYPE=DEL	GT	1|0
11	46036235	DEL_pindel_33407	TAATAGTTATTCTGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAAAAATAAAAAAATAAAAAAAAATAAAAAAATAAAA	T	.	PASS	AC=2276;AF=0.454473;AFR_AF=0.5575;AMR_AF=0.3919;AN=5008;CS=DEL_pindel;EAS_AF=0.5675;END=46036582;EUR_AF=0.3201;MEINFO=AluYa4b,1,281,+;NS=2504;SAS_AF=0.3814;SITEPOST=0.9975;SVTYPE=DEL_ALU	GT	0|1
11	46161016	BI_GS_DEL1_B5_P1870_197	G	<CN0>	100	PASS	AC=368;AF=0.0734824;AFR_AF=0.0136;AMR_AF=0.0807;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0218;END=46162403;EUR_AF=0.164;MC=EM_DL_DEL10173354,YL_CN_CHB_2632,UW_VH_899;NS=2504;SAS_AF=0.1094;SVTYPE=DEL	GT	0|1
11	47057588	EM_DL_DEL14776	A	<CN0>	100	PASS	AC=1321;AF=0.263778;AFR_AF=0.0212;AMR_AF=0.4409;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.2123;END=47063700;EUR_AF=0.4463;MC=UW_VH_11606,UW_VH_3787,UW_VH_4797,UW_VH_3225,BI_GS_DEL1_B4_P1871_11,YL_CN_JPT_2795;NS=2504;SAS_AF=0.3313;SVTYPE=DEL	GT	1|0
11	47579086	ALU_umary_ALU_8565	T	<INS:ME:ALU>	.	.	AC=1094;AF=0.21845;AFR_AF=0.2254;AMR_AF=0.2291;AN=5008;CS=ALU_umary;EAS_AF=0.2153;EUR_AF=0.2217;MEINFO=AluYa3_3,1,281,+;NS=2504;SAS_AF=0.2014;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0|1
11	48120061	DEL_pindel_33459	TTTTATCTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGTGTAGCTGGGACTACAGGCACGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCCCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3216;AF=0.642173;AFR_AF=0.4312;AMR_AF=0.7493;AN=5008;CS=DEL_pindel;EAS_AF=0.6974;END=48120370;EUR_AF=0.6998;MEINFO=AluYg6a2,1,281,-;NS=2504;SAS_AF=0.7352;SITEPOST=0.9967;SVTYPE=DEL_ALU	GT	1|0
11	48600857	BI_GS_DEL1_B5_P1872_669	T	<CN0>	100	PASS	AC=2240;AF=0.447284;AFR_AF=0.2617;AMR_AF=0.585;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4395;END=48604286;EUR_AF=0.6441;MC=EM_DL_DEL14824,YL_CN_GWD_3574,YL_CN_PUR_3141;NS=2504;SAS_AF=0.4059;SVTYPE=DEL	GT	1|0
11	48680194	DEL_pindel_33473	GTGTGCATTCATCTCACAGTGTTAAACCTTGCATTGGATTCAGCAGTTTGGAAATACTGTTTGTGTCCATTCTTTGAAGGGTCGTTTAGGAGCTCATTGAGGAAAATGGTGAAAAAGCAGATATCCCAGGATTAAAACTAGAAGGAAGCTATCTAGGAAACTGCTTTGAGATATGTGCATTCCTCTTACAGAGTTATACATTTCTATTCATT	G	.	PASS	AC=709;AF=0.141573;AFR_AF=0.2451;AMR_AF=0.098;AN=5008;CS=DEL_pindel;EAS_AF=0.1359;END=48680405;EUR_AF=0.0895;NS=2504;SAS_AF=0.092;SITEPOST=0.9993;SVTYPE=DEL	GT	0|1
11	48714039	BI_GS_DEL1_B3_P1872_31	G	<CN0>	100	PASS	AC=2332;AF=0.465655;AFR_AF=0.4153;AMR_AF=0.3905;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5595;END=48715072;EUR_AF=0.3559;MC=YL_CN_ITU_2564,YL_CN_YRI_3293,YL_CN_GWD_3576,YL_CN_PJL_2686;NS=2504;SAS_AF=0.6033;SVTYPE=DEL	GT	0|1
11	48734744	BI_GS_DEL1_B4_P1872_149	C	<CN0>	100	PASS	AC=2038;AF=0.406949;AFR_AF=0.1513;AMR_AF=0.5735;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.4395;END=48736963;EUR_AF=0.6093;MC=YL_CN_BEB_2200,YL_CN_ACB_2925,YL_CN_ASW_2666,YL_CN_CDX_2215;NS=2504;SAS_AF=0.3926;SVTYPE=DEL	GT	1|0
11	48880634	YL_CN_ACB_2931	C	<CN0>	100	PASS	AC=4870;AF=0.972444;AFR_AF=0.9047;AMR_AF=0.9957;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.996;END=48881844;EUR_AF=0.998;MC=YL_CN_GBR_2535;NS=2504;SAS_AF=0.9969;SVTYPE=DEL	GT	1|1
11	48928943	BI_GS_DEL1_B3_P1872_39	T	<CN0>	100	PASS	AC=2184;AF=0.436102;AFR_AF=0.2292;AMR_AF=0.5836;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4315;END=48929253;EUR_AF=0.6431;MC=DEL_pindel_33478,UW_VH_900;NS=2504;SAS_AF=0.4029;SVTYPE=DEL	GT	1|0
11	48933125	ALU_umary_ALU_8570	T	<INS:ME:ALU>	.	.	AC=2898;AF=0.578674;AFR_AF=0.562;AMR_AF=0.562;AN=5008;CS=ALU_umary;EAS_AF=0.5853;EUR_AF=0.5964;MEINFO=AluYb6_2,1,255,-;NS=2504;SAS_AF=0.5879;SITEPOST=1;SVLEN=254;SVTYPE=ALU;TSD=CTTCAGTCTAGATTTT	GT	1|0
11	49282683	ALU_umary_ALU_8572	C	<INS:ME:ALU>	.	.	AC=716;AF=0.142971;AFR_AF=0.2428;AMR_AF=0.0965;AN=5008;CS=ALU_umary;EAS_AF=0.126;EUR_AF=0.1133;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.089;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AATTTACATATCTTC	GT	0|1
11	49425081	DEL_pindel_33483	GAAGAAATAATGGTGAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	.	PASS	AC=2818;AF=0.5627;AFR_AF=0.562;AMR_AF=0.5865;AN=5008;CS=DEL_pindel;EAS_AF=0.5754;END=49425416;EUR_AF=0.5358;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5613;SITEPOST=0.969;SVTYPE=DEL_ALU	GT	0|1
11	49655824	ALU_umary_ALU_8574	T	<INS:ME:ALU>	.	.	AC=1624;AF=0.324281;AFR_AF=0.1316;AMR_AF=0.4366;AN=5008;CS=ALU_umary;EAS_AF=0.3929;EUR_AF=0.4274;MEINFO=AluYa5,14,281,-;NS=2504;SAS_AF=0.3282;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=CAGGTGTGTGTTCTT	GT	1|1
11	49883571	NUMT_umich_24	T	<INS:MT>	176	PASS	AC=2383;AF=0.475839;AFR_AF=0.2784;AMR_AF=0.6081;AN=5008;CIEND=-5,0;CIPOS=0,5;CS=NUMT_umich;EAS_AF=0.5476;END=49883575;EUR_AF=0.5726;MEND=16575;MLEN=14;MSTART=6;NS=2504;SAS_AF=0.4755;SVTYPE=INS	GT	1|1
11	50234630	DEL_pindel_33502	AGAGGGAAGGAAGGAAGGAAGAAGAAAGAGAGAGGGAGGGAGGGAAGGAAG	A	.	PASS	AC=344;AF=0.0686901;AFR_AF=0.0393;AMR_AF=0.0591;AN=5008;CS=DEL_pindel;EAS_AF=0.0615;END=50234680;EUR_AF=0.1282;NS=2504;SAS_AF=0.0613;SITEPOST=0.9976;SVTYPE=DEL	GT	0|1
11	50640269	BI_GS_DEL1_B4_P1874_88	A	<CN0>	100	PASS	AC=2125;AF=0.424321;AFR_AF=0.2209;AMR_AF=0.5692;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5407;END=50641124;EUR_AF=0.492;MC=EM_DL_DEL10175459;NS=2504;SAS_AF=0.407;SVTYPE=DEL	GT	1|0
11	51341174	BI_GS_DEL1_B5_P1875_51	T	<CN0>	100	PASS	AC=2159;AF=0.43111;AFR_AF=0.2027;AMR_AF=0.5821;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5397;END=51362976;EUR_AF=0.5457;MC=EM_DL_DEL15116,YL_CN_FIN_2478;NS=2504;SAS_AF=0.4029;SVTYPE=DEL	GT	1|0
11	51346696	YL_CN_GWD_3605	C	<CN0>	100	PASS	AC=2360;AF=0.471246;AFR_AF=0.2685;AMR_AF=0.6124;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.5407;END=51348982;EUR_AF=0.6064;MC=YL_CN_MSL_2432;NS=2504;SAS_AF=0.4346;SVTYPE=DEL	GT	1|0
11	51353224	DUP_gs_CNV_11_51353224_51367675	T	<CN0>,<CN2>	.	PASS	AC=2160,4;AF=0.43131,0.00079872;AFR_AF=0.2027,0.0008;AMR_AF=0.5821,0;AN=5008;CS=DUP_gs;EAS_AF=0.5397,0.001;END=51367675;EUR_AF=0.5447,0;NS=2504;SAS_AF=0.4049,0.002;SITEPOST=1;SVTYPE=CNV	GT	1|0
11	51577840	BI_GS_DEL1_B4_P1875_48	C	<CN0>	100	PASS	AC=477;AF=0.0952476;AFR_AF=0.1097;AMR_AF=0.0648;AN=5008;CIEND=-21,22;CIPOS=-21,22;CS=DEL_union;EAS_AF=0.0863;END=51581765;EUR_AF=0.1233;MC=YL_CN_CEU_3300;NS=2504;SAS_AF=0.0777;SVTYPE=DEL	GT	0|1
11	54885396	BI_GS_DEL1_B3_P1878_2	G	<CN0>	100	PASS	AC=787;AF=0.157149;AFR_AF=0.0764;AMR_AF=0.2277;AN=5008;CIEND=-40,41;CIPOS=-40,41;CS=DEL_union;EAS_AF=0.1508;END=54892290;EUR_AF=0.2038;MC=YL_CN_CDX_2232;NS=2504;SAS_AF=0.1748;SVTYPE=DEL	GT	1|0
11	56303363	ALU_umary_ALU_8590	G	<INS:ME:ALU>	.	.	AC=2598;AF=0.51877;AFR_AF=0.2912;AMR_AF=0.5634;AN=5008;CS=ALU_umary;EAS_AF=0.6458;EUR_AF=0.5517;MEINFO=AluUndef,23,281,+;NS=2504;SAS_AF=0.6299;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=AAATAAAAACTTTTACTATAG	GT	1|1
11	58166965	BI_GS_DEL1_B3_P1882_5	A	<CN0>	100	PASS	AC=1453;AF=0.290136;AFR_AF=0.3533;AMR_AF=0.2695;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1448;END=58168146;EUR_AF=0.3628;MC=SI_BD_11421;NS=2504;SAS_AF=0.2945;SVTYPE=DEL	GT	0|1
11	61107785	DEL_pindel_33653	TCCCTGCCTTCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=3944;AF=0.78754;AFR_AF=0.739;AMR_AF=0.8314;AN=5008;CS=DEL_pindel;EAS_AF=0.7867;END=61108124;EUR_AF=0.83;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.7791;SITEPOST=0.992;SVTYPE=DEL_ALU	GT	1|1
11	61944785	BI_GS_DEL1_B1_P1885_701	T	<CN0>	100	PASS	AC=963;AF=0.192292;AFR_AF=0.0688;AMR_AF=0.3487;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0615;END=61945082;EUR_AF=0.3976;MC=DEL_pindel_33680;NS=2504;SAS_AF=0.1718;SVTYPE=DEL	GT	0|1
11	64268439	DEL_pindel_33738	GCCGGCTGGGCCTGCTTGTGGGTAAGGGAGAGAGGACAGAAGCCTGTGCTGCTCAGGAGCC	G	.	PASS	AC=4256;AF=0.84984;AFR_AF=0.4644;AMR_AF=0.9539;AN=5008;CS=DEL_pindel;EAS_AF=0.997;END=64268499;EUR_AF=0.993;NS=2504;SAS_AF=0.998;SITEPOST=1;SVTYPE=DEL	GT	1|1
11	65984338	ALU_umary_ALU_8622	T	<INS:ME:ALU>	.	.	AC=755;AF=0.150759;AFR_AF=0.1422;AMR_AF=0.0922;AN=5008;CS=ALU_umary;EAS_AF=0.2252;EUR_AF=0.1402;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.138;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GTGGAGACTTCTT	GT	1|1
11	66711479	YL_CN_MXL_2241	A	<CN0>	100	PASS	AC=1980;AF=0.395367;AFR_AF=0.3986;AMR_AF=0.3501;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4782;END=66713552;EUR_AF=0.4583;MC=BI_GS_DEL1_B1_P1890_525,UW_VH_904,SI_BD_11470,UW_VH_7837,YL_CN_YRI_3357;NS=2504;SAS_AF=0.273;SVTYPE=DEL	GT	0|1
11	67599059	L1_umary_LINE1_2136	G	<INS:ME:LINE1>	.	.	AC=1448;AF=0.289137;AFR_AF=0.0401;AMR_AF=0.3343;AN=5008;CS=L1_umary;EAS_AF=0.504;EUR_AF=0.3221;MEINFO=LINE1,1,6018,+;NS=2504;SAS_AF=0.3384;SITEPOST=1;SVLEN=6017;SVTYPE=LINE1;TSD=AATAAAGAACTGAG	GT	1|1
11	68067241	BI_GS_DEL1_B5_P1892_54	G	<CN0>	100	PASS	AC=218;AF=0.0435303;AFR_AF=0.0045;AMR_AF=0.0735;AN=5008;CIEND=-30,31;CIPOS=-30,31;CS=DEL_union;EAS_AF=0.001;END=68069163;EUR_AF=0.1382;MC=YL_CN_PUR_3213,EM_DL_DEL15739,SI_BD_11482;NS=2504;SAS_AF=0.0215;SVTYPE=DEL	GT	0|1
11	68183089	BI_GS_DEL1_B5_P1892_152	T	<CN0>	100	PASS	AC=3460;AF=0.690895;AFR_AF=0.4024;AMR_AF=0.7435;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7877;END=68183404;EUR_AF=0.7684;NS=2504;SAS_AF=0.864;SVTYPE=DEL	GT	1|0
11	69400834	BI_GS_DEL1_B2_P1893_325	T	<CN0>	100	PASS	AC=1819;AF=0.363219;AFR_AF=0.1346;AMR_AF=0.3444;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2907;END=69401399;EUR_AF=0.5785;MC=UW_VH_905;NS=2504;SAS_AF=0.5389;SVTYPE=DEL	GT	1|1
11	69548392	ALU_umary_ALU_8629	G	<INS:ME:ALU>	.	.	AC=668;AF=0.133387;AFR_AF=0.0666;AMR_AF=0.1354;AN=5008;CS=ALU_umary;EAS_AF=0.2917;EUR_AF=0.0984;MEINFO=AluUndef,10,281,-;NS=2504;SAS_AF=0.0951;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=null	GT	1|0
11	71861597	DEL_pindel_33914	TTACTGAATTGTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCTCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3457;AF=0.690296;AFR_AF=0.5991;AMR_AF=0.7349;AN=5008;CS=DEL_pindel;EAS_AF=0.7103;END=71861912;EUR_AF=0.7584;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6912;SITEPOST=0.9752;SVTYPE=DEL_ALU	GT	1|1
11	74024854	BI_GS_DEL1_B4_P1898_7	G	<CN0>	100	PASS	AC=1046;AF=0.208866;AFR_AF=0.2012;AMR_AF=0.1311;AN=5008;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.2817;END=74027358;EUR_AF=0.175;MC=UW_VH_1544,YL_CN_ACB_3005,EM_DL_DEL15941,SI_BD_11523;NS=2504;SAS_AF=0.2342;SVTYPE=DEL	GT	0|1
11	74145057	DEL_pindel_33949	CAAAAGTGGAAACACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2697;AF=0.538538;AFR_AF=0.6634;AMR_AF=0.4784;AN=5008;CS=DEL_pindel;EAS_AF=0.5069;END=74145404;EUR_AF=0.5398;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4438;SITEPOST=0.99535;SVTYPE=DEL_ALU	GT	1|0
11	81556171	DEL_pindel_34092	TAGGTTCATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTATGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2054;AF=0.410144;AFR_AF=0.528;AMR_AF=0.2867;AN=5008;CS=DEL_pindel;EAS_AF=0.2014;END=81556538;EUR_AF=0.4254;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5378;SITEPOST=0.999;SVTYPE=DEL_ALU	GT	1|1
11	82132213	DEL_pindel_34105	ATAATGGGAATTTTATGGGTACATAAAATTGTAATAATGATAACTAACAGTGAGTTAGGAAATAATTAGTTGTCATTAAATCAATATGAAAATTGAAAGCTTATATGAGAGGGTATGAAATAGAAAAGGAAACGGGGAGACTTTTAACCAAAATGCATATTCAAAGCTCACATTCCTCCCTAGGAACAGCAAAATTGACAAAGCACTCTGGTCCCAATTATAGCAACTAAGAAGATAGTAATACAATCTTTCTTTTGATCTTGACTGGTAAACAGCAATCCATATGAACTATACAGAGCTGGGTCATAACAGTGACTAAGTAGTGGTAAATTTATGTGGATAATTAGAATAGTGTTTGCTGATATCAATT	A	.	PASS	AC=239;AF=0.0477236;AFR_AF=0.0703;AMR_AF=0.0288;AN=5008;CS=DEL_pindel;EAS_AF=0.0179;END=82132582;EUR_AF=0.0427;NS=2504;SAS_AF=0.0665;SITEPOST=0.9993;SVTYPE=DEL	GT	1|0
11	85542984	ALU_umary_ALU_8698	T	<INS:ME:ALU>	.	.	AC=82;AF=0.0163738;AFR_AF=0.0008;AMR_AF=0.0231;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0467;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.0184;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CATGCTGGCTTATTTTT	GT	0|1
11	87918544	DEL_pindel_34217	TCAATCTCTCAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=2175;AF=0.434305;AFR_AF=0.5613;AMR_AF=0.4193;AN=5008;CS=DEL_pindel;EAS_AF=0.2728;END=87918861;EUR_AF=0.4672;MEINFO=AluY,2,281,-;NS=2504;SAS_AF=0.4059;SITEPOST=0.996;SVTYPE=DEL_ALU	GT	1|1
11	88964484	BI_GS_DEL1_B4_P1912_207	G	<CN0>	100	PASS	AC=957;AF=0.191094;AFR_AF=0.3079;AMR_AF=0.1398;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.126;END=88967933;EUR_AF=0.1153;MC=EM_DL_DEL16277,UW_VH_909,YL_CN_TSI_2561;NS=2504;SAS_AF=0.2147;SVTYPE=DEL	GT	1|1
11	89932513	DEL_pindel_34247	GAGTTTACTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAATAAATAAATAAAAAAAATAAAAAAAAAAA	G	.	PASS	AC=2022;AF=0.403754;AFR_AF=0.2579;AMR_AF=0.4597;AN=5008;CS=DEL_pindel;EAS_AF=0.4901;END=89932852;EUR_AF=0.3956;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4806;SITEPOST=0.9926;SVTYPE=DEL_ALU	GT	0|1
11	90193711	BI_GS_DEL1_B2_P1914_146	G	<CN0>	100	PASS	AC=1180;AF=0.235623;AFR_AF=0.0983;AMR_AF=0.3199;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4494;END=90196000;EUR_AF=0.1471;MC=YL_CN_CEU_3374,UW_VH_910,YL_CN_STU_2667,SI_BD_11611,EM_DL_DEL16323;NS=2504;SAS_AF=0.2321;SVTYPE=DEL	GT	0|1
11	92608491	ALU_umary_ALU_8745	G	<INS:ME:ALU>	.	.	AC=2109;AF=0.421126;AFR_AF=0.3911;AMR_AF=0.4193;AN=5008;CS=ALU_umary;EAS_AF=0.3839;EUR_AF=0.4493;MEINFO=AluYc1,7,281,+;NS=2504;SAS_AF=0.4724;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAGATCCTAGACAG	GT	1|1
11	92771855	UW_VH_1851	C	<CN0>	100	PASS	AC=75;AF=0.014976;AFR_AF=0.003;AMR_AF=0.0245;AN=5008;CIEND=0,323;CIPOS=-307,0;CS=DEL_union;EAS_AF=0;END=92773374;EUR_AF=0.0467;MC=BI_GS_DEL1_B5_P1916_1088;NS=2504;SAS_AF=0.0072;SVTYPE=DEL	GT	1|0
11	93021134	BI_GS_DEL1_B4_P1917_6	G	<CN0>	100	PASS	AC=1391;AF=0.277756;AFR_AF=0.3283;AMR_AF=0.353;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1607;END=93022156;EUR_AF=0.4085;MC=SI_BD_11629,UW_VH_1550;NS=2504;SAS_AF=0.1421;SVTYPE=DEL	GT	1|0
11	93102800	DEL_pindel_34313	TAAAGAATGGATTTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACGGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3322;AF=0.663339;AFR_AF=0.6815;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.6944;END=93103118;EUR_AF=0.6352;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.6329;SITEPOST=0.9702;SVTYPE=DEL_ALU	GT	1|1
11	93578001	BI_GS_DEL1_B4_P1917_131	C	<CN0>	100	PASS	AC=1964;AF=0.392173;AFR_AF=0.323;AMR_AF=0.3156;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5556;END=93578212;EUR_AF=0.3529;NS=2504;SAS_AF=0.4121;SVTYPE=DEL	GT	1|0
11	93679228	SI_BD_11632	A	<CN0>	100	PASS	AC=2387;AF=0.476637;AFR_AF=0.5265;AMR_AF=0.3602;AN=5008;CIEND=-50,291;CIPOS=-291,50;CS=DEL_union;EAS_AF=0.5813;END=93681405;EUR_AF=0.4304;NS=2504;SAS_AF=0.4315;SVTYPE=DEL	GT	1|0
11	94091791	DEL_pindel_34345	AAGCTGAAGCAGGTAGTGAGTCACTTGAGGCCAGGAGTTAGAGACCAGCCT	A	.	PASS	AC=2591;AF=0.517372;AFR_AF=0.348;AMR_AF=0.5605;AN=5008;CS=DEL_pindel;EAS_AF=0.6319;END=94091841;EUR_AF=0.5845;NS=2504;SAS_AF=0.5286;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
11	94684369	L1_umary_LINE1_2163	A	<INS:ME:LINE1>	.	.	AC=1516;AF=0.302716;AFR_AF=0.1952;AMR_AF=0.3026;AN=5008;CS=L1_umary;EAS_AF=0.252;EUR_AF=0.4334;MEINFO=LINE1,1927,6018,-;NS=2504;SAS_AF=0.3661;SITEPOST=1;SVLEN=4091;SVTYPE=LINE1;TSD=AA	GT	1|1
11	96001923	BI_GS_DEL1_B5_P1920_7	T	<CN0>	100	PASS	AC=922;AF=0.184105;AFR_AF=0.2504;AMR_AF=0.2997;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1567;END=96003398;EUR_AF=0.1093;MC=UW_VH_2247,EM_DL_DEL10192033,YL_CN_PEL_2432,YL_CN_PJL_2803,YL_CN_PUR_3263,YL_CN_JPT_2896,YL_CN_MXL_2283;NS=2504;SAS_AF=0.1176;SVTYPE=DEL	GT	0|1
11	96233119	DEL_pindel_34397	TAAAACTCAGCACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATGGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1715;AF=0.342452;AFR_AF=0.3623;AMR_AF=0.255;AN=5008;CS=DEL_pindel;EAS_AF=0.4732;END=96233431;EUR_AF=0.2435;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.3446;SITEPOST=0.9994;SVTYPE=DEL_ALU	GT	0|1
11	96614759	DEL_pindel_34403	AGAATTATTCACTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCATGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTTTTTTTTTTTTTAATAGAGATAAGTTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2199;AF=0.439097;AFR_AF=0.438;AMR_AF=0.4035;AN=5008;CS=DEL_pindel;EAS_AF=0.2351;END=96615086;EUR_AF=0.5199;MEINFO=AluY,1,281,-;NS=2504;SAS_AF=0.593;SITEPOST=0.99865;SVTYPE=DEL_ALU	GT	1|1
11	98248208	BI_GS_DEL1_B4_P1922_42	T	<CN0>	100	PASS	AC=1668;AF=0.333067;AFR_AF=0.4788;AMR_AF=0.3055;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0198;END=98248606;EUR_AF=0.5;MC=DEL_pindel_34443,UW_VH_916;NS=2504;SAS_AF=0.3067;SVTYPE=DEL	GT	0|1
11	99276322	DEL_pindel_34465	TAGAATTCTGAATTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3716;AF=0.742013;AFR_AF=0.7337;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.7421;END=99276662;EUR_AF=0.7535;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7444;SITEPOST=0.95335;SVTYPE=DEL_ALU	GT	0|1
11	102169772	ALU_umary_ALU_8792	T	<INS:ME:ALU>	.	.	AC=1295;AF=0.258586;AFR_AF=0.2617;AMR_AF=0.2954;AN=5008;CS=ALU_umary;EAS_AF=0.2192;EUR_AF=0.2734;MEINFO=AluYc2,31,281,-;NS=2504;SAS_AF=0.2536;SITEPOST=1;SVLEN=250;SVTYPE=ALU;TSD=AGTTTGCCAGTATTTTATT	GT	1|0
11	102471846	DEL_pindel_34541	GTCGGCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=2192;AF=0.4377;AFR_AF=0.3585;AMR_AF=0.4452;AN=5008;CS=DEL_pindel;EAS_AF=0.377;END=102472162;EUR_AF=0.4871;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5511;SITEPOST=0.9991;SVTYPE=DEL_ALU	GT	0|1
11	103087928	DEL_pindel_34562	ATGGGAGTTAGGATTTCTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGAC	A	.	PASS	AC=3677;AF=0.734225;AFR_AF=0.7632;AMR_AF=0.7248;AN=5008;CS=DEL_pindel;EAS_AF=0.7341;END=103088084;EUR_AF=0.7326;MEINFO=AluYb,162,281,-;NS=2504;SAS_AF=0.7035;SITEPOST=0.9759;SVTYPE=DEL_ALU	GT	0|1
11	103201280	ALU_umary_ALU_8801	T	<INS:ME:ALU>	.	.	AC=1922;AF=0.383786;AFR_AF=0.2224;AMR_AF=0.5115;AN=5008;CS=ALU_umary;EAS_AF=0.4127;EUR_AF=0.492;MEINFO=AluYb8,4,275,-;NS=2504;SAS_AF=0.3701;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=ACAATAAATTTTTT	GT	0|1
11	103916379	EM_DL_DEL16736	A	<CN0>	100	PASS	AC=615;AF=0.122804;AFR_AF=0.09;AMR_AF=0.1138;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0734;END=103918469;EUR_AF=0.1471;MC=YL_CN_ASW_2773,BI_GS_DEL1_B3_P1927_34,SI_BD_11691;NS=2504;SAS_AF=0.1994;SVTYPE=DEL	GT	0|1
11	104180380	DEL_pindel_34567	AAAATAAAAAAACACGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCGGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATTAAAAAAAAAAAATAAAATAAAAAAAATAAAT	A	.	PASS	AC=3566;AF=0.712061;AFR_AF=0.671;AMR_AF=0.7003;AN=5008;CS=DEL_pindel;EAS_AF=0.7371;END=104180723;EUR_AF=0.7187;MEINFO=AluYa4_4,1,281,+;NS=2504;SAS_AF=0.7434;SITEPOST=0.9303;SVTYPE=DEL_ALU	GT	1|1
11	106044581	ALU_umary_ALU_8820	A	<INS:ME:ALU>	.	.	AC=2128;AF=0.42492;AFR_AF=0.1346;AMR_AF=0.536;AN=5008;CS=ALU_umary;EAS_AF=0.4812;EUR_AF=0.5636;MEINFO=AluYa5,30,280,+;NS=2504;SAS_AF=0.5378;SITEPOST=1;SVLEN=250;SVTYPE=ALU;TSD=AAAGAAATAGCACTTGA	GT	1|0
11	106595867	DEL_pindel_34627	TGACATAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGGAGGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGC	T	.	PASS	AC=1712;AF=0.341853;AFR_AF=0.4017;AMR_AF=0.3559;AN=5008;CS=DEL_pindel;EAS_AF=0.1399;END=106596164;EUR_AF=0.3966;MEINFO=AluY,34,281,-;NS=2504;SAS_AF=0.4029;SITEPOST=0.9956;SVTYPE=DEL_ALU	GT	1|0
11	107158610	DEL_pindel_34642	ACTTAGACTTCTGAGACTTTTAAAAATTTGCCCCAACTATTTCAAGATATTCTTAT	A	.	PASS	AC=1140;AF=0.227636;AFR_AF=0.2057;AMR_AF=0.1787;AN=5008;CS=DEL_pindel;EAS_AF=0.2718;END=107158665;EUR_AF=0.2505;NS=2504;SAS_AF=0.2229;SITEPOST=1;SVTYPE=DEL	GT	1|1
11	109930919	DEL_pindel_34703	TGAACAGTTTCTCTTAGTTTTCAGTTTCTATCATGATTCATCCAACAAGTCATTATTGAAAAATTATTGTGAGCCA	T	.	PASS	AC=3587;AF=0.716254;AFR_AF=0.6823;AMR_AF=0.6873;AN=5008;CS=DEL_pindel;EAS_AF=0.871;END=109930994;EUR_AF=0.7058;NS=2504;SAS_AF=0.6339;SITEPOST=0.9993;SVTYPE=DEL	GT	1|1
11	109976699	DEL_pindel_34704	GAAAAGTTATACCAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGACTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAATAAATAAATAAATAAATAAATAAAT	G	.	PASS	AC=3108;AF=0.620607;AFR_AF=0.6346;AMR_AF=0.6455;AN=5008;CS=DEL_pindel;EAS_AF=0.7431;END=109977025;EUR_AF=0.5905;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.4888;SITEPOST=0.99225;SVTYPE=DEL_ALU	GT	1|1
11	110276938	ALU_umary_ALU_8837	T	<INS:ME:ALU>	.	.	AC=676;AF=0.134984;AFR_AF=0.1475;AMR_AF=0.0951;AN=5008;CS=ALU_umary;EAS_AF=0.1845;EUR_AF=0.1064;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.1247;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CGGGCCCGGTATTTTT	GT	0|1
11	119932287	DEL_pindel_34858	GCCTCCGTGGGATGCTTTCCTGTTGCCACAGCAACTGGATTCCCAGGGAACCTGTGGGCCCAGGCCACCATCTTGGGGAGTTCCTAATGATATGTTCTGAAAATTACAACATTTCAACCCAGGTCCCGTCGCGCAGCCCCACACTGGGGCTACTAAGCTAGAGAGAGAGGGTGTCCTGTGGTGAAACTGCATTTTCTGGTGCTTGCCTATTTGGGGCTGGGAGAGGTTGAGAGGAGAACTAGGCCATGGTTTCTAAGGTGTTCCCAGCTGGCTTGGCCAGGTCATCCCACCGTGGCCAGCACCCGCAGCGTCTGGAGGCTGGGAGGAGGAGCGCTCCCCTGTGATCCCTCCCATCTTCCCACTGCGCTTA	G	.	PASS	AC=1306;AF=0.260783;AFR_AF=0.3971;AMR_AF=0.2853;AN=5008;CS=DEL_pindel;EAS_AF=0.1359;END=119932656;EUR_AF=0.3072;NS=2504;SAS_AF=0.1401;SITEPOST=0.9994;SVTYPE=DEL	GT	1|0
11	122595306	DEL_pindel_34911	CTGGGCCAGGCCTGAACTGGCTTCTTAGAGGAGGTAGTAGCATTTGATCTTAAAA	C	.	PASS	AC=299;AF=0.0597045;AFR_AF=0.0635;AMR_AF=0.0504;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=122595360;EUR_AF=0.1034;NS=2504;SAS_AF=0.0757;SITEPOST=0.9993;SVTYPE=DEL	GT	0|1
11	124830138	DEL_pindel_34944	TAAAGAAAAGTGCCGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3600;AF=0.71885;AFR_AF=0.708;AMR_AF=0.5692;AN=5008;CS=DEL_pindel;EAS_AF=0.8145;END=124830246;EUR_AF=0.6869;MEINFO=AluY,212,281,+;NS=2504;SAS_AF=0.774;SITEPOST=0.9785;SVTYPE=DEL_ALU	GT	1|0
11	125053085	DEL_pindel_34947	CGATGAATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGTGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAG	C	.	PASS	AC=1777;AF=0.354832;AFR_AF=0.3533;AMR_AF=0.3401;AN=5008;CS=DEL_pindel;EAS_AF=0.3988;END=125053375;EUR_AF=0.3907;MEINFO=AluYb6_2,37,281,-;NS=2504;SAS_AF=0.2853;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	0|1
11	125719438	DEL_pindel_34957	GCATATGTTCATTGCAGCACTATTCACAATAGCAAAGACATGGAATAAACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGAACATACACACTATGAAATACTATGCAGCCATAAAAAGGAATGAGATCATGTCCTTTTCAAGGA	G	.	PASS	AC=998;AF=0.199281;AFR_AF=0.2458;AMR_AF=0.1556;AN=5008;CS=DEL_pindel;EAS_AF=0.2698;END=125719592;EUR_AF=0.1491;NS=2504;SAS_AF=0.1462;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
11	127456298	DEL_pindel_35006	ATGATTTAGGATATTACTGCAAAGTAGTTTGTTTAAAAAGAGGGCAGCCTGGTTGGAAATCTTCCCAGGAGAGCCATAGAAAATATGTTAGGGTAAGAAATAAGACTGACCTTGATTTCAATTAATGAAACCACT	A	.	PASS	AC=2703;AF=0.539736;AFR_AF=0.348;AMR_AF=0.5504;AN=5008;CS=DEL_pindel;EAS_AF=0.7768;END=127456432;EUR_AF=0.5427;NS=2504;SAS_AF=0.544;SITEPOST=0.9962;SVTYPE=DEL	GT	1|0
11	127740935	ALU_umary_ALU_8903	A	<INS:ME:ALU>	.	.	AC=905;AF=0.180711;AFR_AF=0.0514;AMR_AF=0.219;AN=5008;CS=ALU_umary;EAS_AF=0.2609;EUR_AF=0.1998;MEINFO=AluUndef,25,269,-;NS=2504;SAS_AF=0.226;SITEPOST=0.9722;SVLEN=244;SVTYPE=ALU;TSD=null	GT	1|0
11	128682712	BI_GS_DEL1_B4_P1952_212	G	<CN0>	100	PASS	AC=1049;AF=0.209465;AFR_AF=0.1097;AMR_AF=0.2248;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.244;END=128683409;EUR_AF=0.2893;MC=SI_BD_11798,UW_VH_2249;NS=2504;SAS_AF=0.2157;SVTYPE=DEL	GT	1|0
11	132368628	DEL_pindel_35102	TGTTTTAAAATATGGCTCTTAGGCATATAGGACCCGAAGAACCCAAGTCCTGATG	T	.	PASS	AC=1586;AF=0.316693;AFR_AF=0.3419;AMR_AF=0.3429;AN=5008;CS=DEL_pindel;EAS_AF=0.3829;END=132368682;EUR_AF=0.2177;NS=2504;SAS_AF=0.2975;SITEPOST=0.9994;SVTYPE=DEL	GT	1|0
11	132558585	DEL_pindel_35111	TAAAAATAGATTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2470;AF=0.493211;AFR_AF=0.534;AMR_AF=0.5461;AN=5008;CS=DEL_pindel;EAS_AF=0.4593;END=132558874;EUR_AF=0.4692;MEINFO=AluYb6_2,39,281,+;NS=2504;SAS_AF=0.4601;SITEPOST=0.999;SVTYPE=DEL_ALU	GT	1|0
11	134305647	L1_umary_LINE1_2218	G	<INS:ME:LINE1>	.	.	AC=3816;AF=0.761981;AFR_AF=0.795;AMR_AF=0.7608;AN=5008;CS=L1_umary;EAS_AF=0.7966;EUR_AF=0.7217;MEINFO=LINE1,5724,6019,-;NS=2504;SAS_AF=0.7239;SITEPOST=1;SVLEN=295;SVTYPE=LINE1;TSD=null	GT	1|1
11	134803512	YL_CN_GWD_3795	C	<CN0>	100	PASS	AC=2155;AF=0.430312;AFR_AF=0.5174;AMR_AF=0.4553;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4921;END=134805507;EUR_AF=0.341;NS=2504;SAS_AF=0.3231;SVTYPE=DEL	GT	0|1
12	177787	DUP_gs_CNV_12_177787_187378	T	<CN2>,<CN3>	.	PASS	AC=2250,7;AF=0.449281,0.00139776;AFR_AF=0.1558,0.0045;AMR_AF=0.4899,0;AN=5008;CS=DUP_gs;EAS_AF=0.4712,0;END=187378;EUR_AF=0.6521,0.001;NS=2504;SAS_AF=0.5859,0;SITEPOST=0.9955;SVTYPE=CNV	GT	1|1
12	240152	DEL_pindel_35183	ATCCTCAGCACTGTGCCCCCCAGCTAGCGGCTCTTCCTCCCCACACCTGGCCCCCGC	A	.	PASS	AC=1502;AF=0.29992;AFR_AF=0.298;AMR_AF=0.2579;AN=5008;CS=DEL_pindel;EAS_AF=0.3075;END=240208;EUR_AF=0.2644;NS=2504;SAS_AF=0.3609;SITEPOST=0.98845;SVTYPE=DEL	GT	1|0
12	1864004	BI_GS_DEL1_B1_P1961_685	T	<CN0>	100	PASS	AC=1697;AF=0.338858;AFR_AF=0.1127;AMR_AF=0.3372;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3909;END=1864320;EUR_AF=0.5;NS=2504;SAS_AF=0.4264;SVTYPE=DEL	GT	1|0
12	2089856	ALU_umary_ALU_8951	T	<INS:ME:ALU>	.	.	AC=1116;AF=0.222843;AFR_AF=0.1664;AMR_AF=0.1412;AN=5008;CS=ALU_umary;EAS_AF=0.3839;EUR_AF=0.2584;MEINFO=AluYa4_4,1,274,-;NS=2504;SAS_AF=0.1544;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=CCTTTAACTATTTTT	GT	0|1
12	2300995	DEL_pindel_35247	TACACAGGCACACACATGCACTCACACATGTACTCGCATACACAGGCGCACACGTAC	T	.	PASS	AC=1210;AF=0.241613;AFR_AF=0.1407;AMR_AF=0.2767;AN=5008;CS=DEL_pindel;EAS_AF=0.2837;END=2301051;EUR_AF=0.2674;NS=2504;SAS_AF=0.2832;SITEPOST=0.9996;SVTYPE=DEL	GT	0|1
12	4043666	BI_GS_DEL1_B4_P1964_10	A	<CN0>	100	PASS	AC=468;AF=0.0934505;AFR_AF=0.1165;AMR_AF=0.1167;AN=5008;CIEND=-36,36;CIPOS=-36,36;CS=DEL_union;EAS_AF=0.121;END=4044819;EUR_AF=0.0268;MC=UW_VH_4410;NS=2504;SAS_AF=0.0859;SVTYPE=DEL	GT	0|1
12	7830054	ALU_umary_ALU_8982	T	<INS:ME:ALU>	.	.	AC=152;AF=0.0303514;AFR_AF=0.0325;AMR_AF=0.0331;AN=5008;CS=ALU_umary;EAS_AF=0.004;EUR_AF=0.0656;MEINFO=AluUndef,2,280,-;NS=2504;SAS_AF=0.0164;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TTATCAGGTTCTT	GT	0|1
12	8558501	SI_BD_11938	C	<CN0>	100	PASS	AC=4463;AF=0.891174;AFR_AF=0.6324;AMR_AF=0.9496;AN=5008;CIEND=-50,221;CIPOS=-221,50;CS=DEL_union;EAS_AF=1;END=8568269;EUR_AF=0.9871;MC=BI_GS_DEL1_B1_P1968_321,YL_CN_GWD_3812;NS=2504;SAS_AF=0.9888;SVTYPE=DEL	GT	1|1
12	8558618	YL_CN_GWD_3813	A	<CN0>	100	PASS	AC=4549;AF=0.908347;AFR_AF=0.6944;AMR_AF=0.9539;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=1;END=8591535;EUR_AF=0.9881;NS=2504;SAS_AF=0.9888;SVTYPE=DEL	GT	1|1
12	8568920	DUP_gs_CNV_12_8568920_8587027	T	<CN0>,<CN2>	.	PASS	AC=4581,17;AF=0.914736,0.00339457;AFR_AF=0.7179,0.0129;AMR_AF=0.9553,0;AN=5008;CS=DUP_gs;EAS_AF=1,0;END=8587027;EUR_AF=0.9881,0;NS=2504;SAS_AF=0.9888,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
12	8625578	DEL_pindel_35413	TAGCTCCTACTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGTGTAGCTGGGACTACAGGCACGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3232;AF=0.645367;AFR_AF=0.5575;AMR_AF=0.67;AN=5008;CS=DEL_pindel;EAS_AF=0.7312;END=8625889;EUR_AF=0.6352;MEINFO=AluYg6a2,1,281,-;NS=2504;SAS_AF=0.6687;SITEPOST=0.9723;SVTYPE=DEL_ALU	GT	0|1
12	9016853	SI_BD_11943	C	<CN0>	100	PASS	AC=4638;AF=0.926118;AFR_AF=0.7368;AMR_AF=0.9683;AN=5008;CIEND=-50,318;CIPOS=-318,50;CS=DEL_union;EAS_AF=1;END=9017888;EUR_AF=1;MC=YL_CN_CEU_3433,EM_DL_DEL10212238,YL_CN_KHV_2845,UW_VH_933,YL_CN_PEL_2472;NS=2504;SAS_AF=1;SVTYPE=DEL	GT	1|1
12	9635128	BI_GS_CNV_12_9635128_9688881	A	<CN0>	100	PASS	AC=2504;AF=0.5;AFR_AF=0.4811;AMR_AF=0.4568;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.4405;END=9688881;EUR_AF=0.5775;NS=2504;SAS_AF=0.5378;SVTYPE=DEL	GT	1|0
12	9722037	UW_VH_934	A	<CN0>	100	PASS	AC=4398;AF=0.878195;AFR_AF=0.5696;AMR_AF=0.9539;AN=5008;CIEND=0,502;CIPOS=-550,0;CS=DEL_union;EAS_AF=0.995;END=9723011;EUR_AF=0.996;MC=SI_BD_11952;NS=2504;SAS_AF=1;SVTYPE=DEL	GT	1|1
12	10234202	ALU_umary_ALU_8992	T	<INS:ME:ALU>	.	.	AC=2456;AF=0.490415;AFR_AF=0.5371;AMR_AF=0.4568;AN=5008;CS=ALU_umary;EAS_AF=0.3095;EUR_AF=0.675;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.4479;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGGCAAATTAATTTCTTT	GT	1|1
12	11068046	BI_GS_DEL1_B3_P1971_3	T	<CN0>	100	PASS	AC=2582;AF=0.515575;AFR_AF=0.1354;AMR_AF=0.5893;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7252;END=11068300;EUR_AF=0.6243;NS=2504;SAS_AF=0.6493;SVTYPE=DEL	GT	1|1
12	11222191	DUP_gs_CNV_12_11222191_11249671	G	<CN0>,<CN2>	.	PASS	AC=1694,2;AF=0.338259,0.00039936;AFR_AF=0.3411,0;AMR_AF=0.4654,0;AN=5008;CS=DUP_gs;EAS_AF=0.1944,0.001;END=11249671;EUR_AF=0.4911,0;MC=YL_CN_CEU_3446,EM_DL_DEL17773;NS=2504;SAS_AF=0.2352,0.001;SITEPOST=1;SVTYPE=CNV	GT	1|1
12	11258524	DEL_pindel_35469	AATAACTTATTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTTTCGCCCAAGCTGGACTGCAGTGGTGCTATCCCGGCTCACTGCAAGCTCCGCCTCTTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=1701;AF=0.339657;AFR_AF=0.3487;AMR_AF=0.4553;AN=5008;CS=DEL_pindel;EAS_AF=0.1925;END=11258838;EUR_AF=0.4791;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.2536;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	1|1
12	11288103	DEL_pindel_35471	CAACAAACCCATTTAGAAAAACAAAATCCAAAGCCATGTGATATATAAATATCT	C	.	PASS	AC=1734;AF=0.346246;AFR_AF=0.3533;AMR_AF=0.464;AN=5008;CS=DEL_pindel;EAS_AF=0.1905;END=11288156;EUR_AF=0.501;NS=2504;SAS_AF=0.2546;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
12	11515723	DUP_gs_CNV_12_11515723_11544432	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=407,368,43,1;AF=0.08127,0.0734824,0.00858626,0.00019968;AFR_AF=0.1649,0.0643,0.0098,0.0008;AMR_AF=0.0533,0.0735,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.0278,0.0952,0.0188,0;END=11544432;EUR_AF=0.0845,0.0974,0.007,0;NS=2504;SAS_AF=0.0399,0.0389,0.0041,0;SITEPOST=1;SVTYPE=CNV	GT	0|3
12	12544792	INV_delly_INV00021200	C	<INV>	.	PASS	AC=4129;AF=0.824481;AFR_AF=0.7784;AMR_AF=0.8184;AN=5008;CIEND=-21,21;CIPOS=-21,21;CS=INV_delly;EAS_AF=0.9048;END=12546607;EUR_AF=0.8539;IMPRECISE;NS=2504;SAS_AF=0.7781;SITEPOST=0.9996;SVTYPE=INV	GT	1|1
12	12933703	L1_umary_LINE1_2231	T	<INS:ME:LINE1>	.	.	AC=2132;AF=0.425719;AFR_AF=0.2466;AMR_AF=0.3919;AN=5008;CS=L1_umary;EAS_AF=0.621;EUR_AF=0.5219;MEINFO=LINE1,4272,6019,-;NS=2504;SAS_AF=0.3916;SITEPOST=1;SVLEN=1747;SVTYPE=LINE1;TSD=ACACAGCTAATTTTTGTAGTTTTT	GT	1|1
12	13199068	DEL_pindel_35527	AAGAAAATGTTCACTTGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGG	A	.	PASS	AC=1360;AF=0.271565;AFR_AF=0.3298;AMR_AF=0.232;AN=5008;CS=DEL_pindel;EAS_AF=0.3681;END=13199172;EUR_AF=0.1471;NS=2504;SAS_AF=0.2495;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
12	14258601	DEL_pindel_35556	GAAAGAAATAAAGGGCATCCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGTGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	G	.	PASS	AC=1782;AF=0.355831;AFR_AF=0.4024;AMR_AF=0.2983;AN=5008;CS=DEL_pindel;EAS_AF=0.2649;END=14258932;EUR_AF=0.4274;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3538;SITEPOST=0.98995;SVTYPE=DEL_ALU	GT	1|0
12	15104647	ALU_umary_ALU_9019	A	<INS:ME:ALU>	.	.	AC=920;AF=0.183706;AFR_AF=0.1346;AMR_AF=0.2637;AN=5008;CS=ALU_umary;EAS_AF=0.1349;EUR_AF=0.2445;MEINFO=AluUndef,6,278,+;NS=2504;SAS_AF=0.181;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AAAACATTGAGGAGA	GT	1|0
12	15608405	BI_GS_CNV_12_15608405_15613576	G	<CN0>	100	PASS	AC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0;END=15613576;EUR_AF=0.001;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	1|0
12	16420132	UW_VH_25172	A	<CN0>	100	PASS	AC=2483;AF=0.495807;AFR_AF=0.4773;AMR_AF=0.4553;AN=5008;CIEND=0,335;CIPOS=-416,0;CS=DEL_union;EAS_AF=0.4931;END=16421288;EUR_AF=0.4006;MC=YL_CN_CDX_2350,UW_VH_10925,YL_CN_GWD_3840,UW_VH_20802,UW_VH_10109,YL_CN_CHS_2828,YL_CN_ITU_2728,YL_CN_KHV_2861,YL_CN_LWK_2641,YL_CN_IBS_2501,SI_BD_12006,YL_CN_CHB_2796,YL_CN_GIH_2178,YL_CN_YRI_3486,YL_CN_CEU_3453,YL_CN_BEB_2330,YL_CN_STU_2745,YL_CN_PUR_3352,UW_VH_1557,YL_CN_JPT_2957,BI_GS_DEL1_B1_P1976_370,YL_CN_ESN_2844;NS=2504;SAS_AF=0.6503;SVTYPE=DEL	GT	1|1
12	17444827	BI_GS_DEL1_B1_P1977_343	C	<CN0>	100	PASS	AC=2033;AF=0.40595;AFR_AF=0.3245;AMR_AF=0.4035;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3274;END=17445939;EUR_AF=0.5557;MC=YL_CN_KHV_2862,YL_CN_GBR_2693,SI_BD_12011;NS=2504;SAS_AF=0.4448;SVTYPE=DEL	GT	0|1
12	19806222	ALU_umary_ALU_9047	G	<INS:ME:ALU>	.	.	AC=1921;AF=0.383586;AFR_AF=0.5552;AMR_AF=0.3444;AN=5008;CS=ALU_umary;EAS_AF=0.2778;EUR_AF=0.4056;MEINFO=AluUndef,42,281,+;NS=2504;SAS_AF=0.2658;SITEPOST=1;SVLEN=239;SVTYPE=ALU;TSD=AAGAGGCATTAAGAG	GT	1|0
12	22047473	DEL_pindel_35697	TCTGTTGTTTTGGGGTCCTCACTGTGGATCTTTACTAAAACTGTCAGCATTAATATCCAAAGAAGACTTACTTCCATTTTTTTTTTTTTGAGACACGGTATCA	T	.	PASS	AC=1439;AF=0.28734;AFR_AF=0.3351;AMR_AF=0.3689;AN=5008;CS=DEL_pindel;EAS_AF=0.1667;END=22047575;EUR_AF=0.2724;NS=2504;SAS_AF=0.3047;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
12	22123796	ALU_umary_ALU_9064	T	<INS:ME:ALU>	.	.	AC=2711;AF=0.541334;AFR_AF=0.2769;AMR_AF=0.6225;AN=5008;CS=ALU_umary;EAS_AF=0.62;EUR_AF=0.6412;MEINFO=AluYa5,3,279,-;NS=2504;SAS_AF=0.6575;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=TCCCTTCCATTCTT	GT	1|1
12	23795725	DEL_pindel_35732	TAAAAGGTAATTATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=726;AF=0.144968;AFR_AF=0.0439;AMR_AF=0.0836;AN=5008;CS=DEL_pindel;EAS_AF=0.1994;END=23796038;EUR_AF=0.1978;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2147;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	0|1
12	23939446	BI_GS_DEL1_B2_P1983_661	T	<CN0>	100	PASS	AC=736;AF=0.146965;AFR_AF=0.177;AMR_AF=0.0807;AN=5008;CIEND=-30,30;CIPOS=-30,30;CS=DEL_union;EAS_AF=0.1062;END=23940212;EUR_AF=0.1551;MC=BI_GS_DEL1_B5_P1983_1122,UW_VH_2407,BI_GS_DEL1_B2_P1983_662;NS=2504;SAS_AF=0.1871;SVTYPE=DEL	GT	0|1
12	24460412	BI_GS_DEL1_B5_P1984_559	G	<CN0>	100	PASS	AC=3410;AF=0.680911;AFR_AF=0.3865;AMR_AF=0.7997;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8522;END=24460701;EUR_AF=0.7306;NS=2504;SAS_AF=0.7669;SVTYPE=DEL	GT	0|1
12	25462949	ALU_umary_ALU_9083	G	<INS:ME:ALU>	.	.	AC=1254;AF=0.250399;AFR_AF=0.0545;AMR_AF=0.2219;AN=5008;CS=ALU_umary;EAS_AF=0.3651;EUR_AF=0.3757;MEINFO=AluUndef,1,269,+;NS=2504;SAS_AF=0.2883;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAAGATGCAGGGATGG	GT	1|0
12	27433987	DEL_pindel_35796	TGGCTTTAGCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCGCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	T	.	PASS	AC=3065;AF=0.612021;AFR_AF=0.6104;AMR_AF=0.6268;AN=5008;CS=DEL_pindel;EAS_AF=0.5913;END=27434318;EUR_AF=0.6431;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.593;SITEPOST=0.9899;SVTYPE=DEL_ALU	GT	1|0
12	27864811	ALU_umary_ALU_9100	T	<INS:ME:ALU>	.	.	AC=1795;AF=0.358427;AFR_AF=0.3268;AMR_AF=0.4092;AN=5008;CS=ALU_umary;EAS_AF=0.3611;EUR_AF=0.3748;MEINFO=AluYa5,1,279,-;NS=2504;SAS_AF=0.3456;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=ATAATTGTCTATTTTT	GT	1|1
12	28274591	ALU_umary_ALU_9105	A	<INS:ME:ALU>	.	.	AC=452;AF=0.0902556;AFR_AF=0.0083;AMR_AF=0.0793;AN=5008;CS=ALU_umary;EAS_AF=0.0556;EUR_AF=0.2306;MEINFO=AluUndef,1,263,+;NS=2504;SAS_AF=0.1002;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=AAAGAAAATGA	GT	1|0
12	29844383	BI_GS_DEL1_B4_P1989_213	A	<CN0>	100	PASS	AC=909;AF=0.18151;AFR_AF=0.1422;AMR_AF=0.2262;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3165;END=29846440;EUR_AF=0.1402;MC=EM_DL_DEL18305,UW_VH_14077,UW_VH_1560,YL_CN_TSI_2678,YL_CN_FIN_2601;NS=2504;SAS_AF=0.1063;SVTYPE=DEL	GT	0|1
12	30371300	BI_GS_DEL1_B1_P1990_361	G	<CN0>	100	PASS	AC=2617;AF=0.522564;AFR_AF=0.4251;AMR_AF=0.5951;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6419;END=30371728;EUR_AF=0.5636;MC=DEL_pindel_35872,UW_VH_943;NS=2504;SAS_AF=0.4376;SVTYPE=DEL	GT	1|1
12	32358663	ALU_umary_ALU_9130	T	<INS:ME:ALU>	.	.	AC=1227;AF=0.245008;AFR_AF=0.2269;AMR_AF=0.3429;AN=5008;CS=ALU_umary;EAS_AF=0.247;EUR_AF=0.2614;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.181;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TATATGTCAATTTT	GT	1|0
12	32443055	DEL_pindel_35922	AAGCATTCTGAATAACAAGGAGCTCCAACCCCTTATATATAAATGAGGTTACATATAGTAGGTTGAAAGCAGGTTTCCAAAACAACCAATTAGTTTGTATAGCTTC	A	.	PASS	AC=714;AF=0.142572;AFR_AF=0.1029;AMR_AF=0.0908;AN=5008;CS=DEL_pindel;EAS_AF=0.2192;END=32443160;EUR_AF=0.1193;NS=2504;SAS_AF=0.1779;SITEPOST=1;SVTYPE=DEL	GT	0|1
12	32963599	DEL_pindel_35945	TAGAATAAACATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2879;AF=0.57488;AFR_AF=0.4985;AMR_AF=0.5461;AN=5008;CS=DEL_pindel;EAS_AF=0.6052;END=32963914;EUR_AF=0.6312;MEINFO=AluYa4b,1,281,-;NS=2504;SAS_AF=0.6094;SITEPOST=0.9946;SVTYPE=DEL_ALU	GT	1|1
12	33296520	UW_VH_3455	G	<CN0>	100	PASS	AC=770;AF=0.153754;AFR_AF=0.0688;AMR_AF=0.2061;AN=5008;CIEND=0,382;CIPOS=-412,0;CS=DEL_union;EAS_AF=0.119;END=33307372;EUR_AF=0.2207;MC=UW_VH_18532,YL_CN_FIN_2609,BI_GS_DEL1_B2_P1993_188,EM_DL_DEL18419,UW_VH_2544,SI_BD_12099;NS=2504;SAS_AF=0.1984;SVTYPE=DEL	GT	0|1
12	33325803	L1_umary_LINE1_2267	C	<INS:ME:LINE1>	.	.	AC=635;AF=0.126797;AFR_AF=0.0151;AMR_AF=0.1744;AN=5008;CS=L1_umary;EAS_AF=0.1091;EUR_AF=0.2058;MEINFO=LINE1,1,5997,-;NS=2504;SAS_AF=0.181;SITEPOST=1;SVLEN=5996;SVTYPE=LINE1;TSD=CTTGCTTTTC	GT	0|1
12	40673027	ALU_umary_ALU_9158	T	<INS:ME:ALU>	.	.	AC=1536;AF=0.306709;AFR_AF=0.2277;AMR_AF=0.2248;AN=5008;CS=ALU_umary;EAS_AF=0.2808;EUR_AF=0.4016;MEINFO=AluYc1,4,281,-;NS=2504;SAS_AF=0.4008;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=GCCAATAGTTTACTTTTT	GT	0|1
12	40832796	ALU_umary_ALU_9160	C	<INS:ME:ALU>	.	.	AC=1484;AF=0.296326;AFR_AF=0.2194;AMR_AF=0.3055;AN=5008;CS=ALU_umary;EAS_AF=0.2728;EUR_AF=0.329;MEINFO=AluUndef,5,281,+;NS=2504;SAS_AF=0.3845;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=GAAAAAATTTTAC	GT	0|1
12	41183193	UW_VH_951	A	<CN0>	100	PASS	AC=4491;AF=0.896765;AFR_AF=0.8343;AMR_AF=0.9092;AN=5008;CIEND=0,459;CIPOS=-537,0;CS=DEL_union;EAS_AF=0.9058;END=41183503;EUR_AF=0.9175;MC=SI_BD_12142;NS=2504;SAS_AF=0.9417;SVTYPE=DEL	GT	1|1
12	41757437	DEL_pindel_35982	TGCTAGTTTGGAGATAAATCATATTATGGCCAAGGGTCATGATGGCAGGAGTAATCAGAGGTGTTCTTGTGTTGTGATAAGGGTGGAGA	T	.	PASS	AC=3721;AF=0.743011;AFR_AF=0.6233;AMR_AF=0.8631;AN=5008;CS=DEL_pindel;EAS_AF=0.7817;END=41757525;EUR_AF=0.7942;NS=2504;SAS_AF=0.727;SITEPOST=0.9992;SVTYPE=DEL	GT	1|1
12	42238053	DEL_pindel_35996	AGATGCTACATATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTATTTTTTTTTTATTTTATTTTATTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATACTATCCCTCCCCCCTCCCCCAACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCAGCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATG	A	.	PASS	AC=2670;AF=0.533147;AFR_AF=0.3684;AMR_AF=0.5793;AN=5008;CS=DEL_pindel;EAS_AF=0.6131;END=42238877;EUR_AF=0.5865;MEINFO=LINE1,5276,6019,-;NS=2504;SAS_AF=0.5859;SITEPOST=0.9834;SVTYPE=DEL_LINE1	GT	0|1
12	43256994	L1_umary_LINE1_2278	T	<INS:ME:LINE1>	.	.	AC=2813;AF=0.561701;AFR_AF=0.2572;AMR_AF=0.5476;AN=5008;CS=L1_umary;EAS_AF=0.6319;EUR_AF=0.7783;MEINFO=LINE1,4890,6012,-;NS=2504;SAS_AF=0.6881;SITEPOST=1;SVLEN=1122;SVTYPE=LINE1;TSD=TTTAATTCTTTTTAATATTTTT	GT	0|1
12	43717940	ALU_umary_ALU_9177	T	<INS:ME:ALU>	.	.	AC=2262;AF=0.451677;AFR_AF=0.3434;AMR_AF=0.4323;AN=5008;CS=ALU_umary;EAS_AF=0.6577;EUR_AF=0.3807;MEINFO=AluYb11,1,281,-;NS=2504;SAS_AF=0.4724;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CCAAATATTCTT	GT	1|0
12	45011174	DEL_pindel_36051	TGAAAAAGCAGTTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAACACACACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=670;AF=0.133786;AFR_AF=0.3321;AMR_AF=0.0893;AN=5008;CS=DEL_pindel;EAS_AF=0.0298;END=45011496;EUR_AF=0.1143;MEINFO=AluYa4_4,1,281,+;NS=2504;SAS_AF=0.0245;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	1|0
12	45131147	ALU_umary_ALU_9187	T	<INS:ME:ALU>	.	.	AC=509;AF=0.101637;AFR_AF=0.0303;AMR_AF=0.0648;AN=5008;CS=ALU_umary;EAS_AF=0.1508;EUR_AF=0.1451;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.1288;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CAATAACTTTTTT	GT	0|1
12	45419555	ALU_umary_ALU_9188	G	<INS:ME:ALU>	.	.	AC=2730;AF=0.545128;AFR_AF=0.5136;AMR_AF=0.5216;AN=5008;CS=ALU_umary;EAS_AF=0.5893;EUR_AF=0.4612;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.6452;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AATAGAAAGATCTG	GT	1|1
12	45903207	UW_VH_955	G	<CN0>	100	PASS	AC=1505;AF=0.300519;AFR_AF=0.4032;AMR_AF=0.3271;AN=5008;CIEND=0,517;CIPOS=-490,0;CS=DEL_union;EAS_AF=0.006;END=45909947;EUR_AF=0.5726;MC=YL_CN_GIH_2209,BI_GS_CNV_12_45903196_45909818,EM_DL_DEL18876,SI_BD_12161;NS=2504;SAS_AF=0.1667;SVTYPE=DEL	GT	1|0
12	45948359	DEL_pindel_36070	AGAAACTGGAAACATTGCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTAGTATATGTGCTGCCGAAGCGAGCACAT	A	.	PASS	AC=709;AF=0.141573;AFR_AF=0.0204;AMR_AF=0.2752;AN=5008;CS=DEL_pindel;EAS_AF=0.006;END=45948444;EUR_AF=0.3698;NS=2504;SAS_AF=0.1155;SITEPOST=0.996;SVTYPE=DEL	GT	0|1
12	46046309	ALU_umary_ALU_9192	A	<INS:ME:ALU>	.	.	AC=516;AF=0.103035;AFR_AF=0.1467;AMR_AF=0.1081;AN=5008;CS=ALU_umary;EAS_AF=0.0397;EUR_AF=0.1421;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0.0654;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAGCAATTATA	GT	0|1
12	47075350	DEL_pindel_36099	TAAGAAAGTATCAGTCAGGCCGGGCGCGGTGGCTCACGTCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACGCGGTGAAACCCCATCTCTACTAAAAAAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACGCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3955;AF=0.789736;AFR_AF=0.7784;AMR_AF=0.7882;AN=5008;CS=DEL_pindel;EAS_AF=0.7619;END=47075698;EUR_AF=0.8052;MEINFO=AluYf1,1,281,+;NS=2504;SAS_AF=0.819;SITEPOST=0.9604;SVTYPE=DEL_ALU	GT	0|1
12	49709229	BI_GS_DEL1_B2_P2009_435	C	<CN0>	100	PASS	AC=84;AF=0.0167732;AFR_AF=0.0053;AMR_AF=0.0245;AN=5008;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0.0228;END=49710582;EUR_AF=0.0179;MC=UW_VH_1856;NS=2504;SAS_AF=0.0194;SVTYPE=DEL	GT	0|1
12	54245407	DEL_pindel_36225	TAAAAAGTTAGCTTCAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGACTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	T	.	PASS	AC=3029;AF=0.604832;AFR_AF=0.7035;AMR_AF=0.5778;AN=5008;CS=DEL_pindel;EAS_AF=0.3115;END=54245696;EUR_AF=0.7247;MEINFO=AluYb6_2,23,281,+;NS=2504;SAS_AF=0.6697;SITEPOST=0.9825;SVTYPE=DEL_ALU	GT	1|1
12	58028003	BI_GS_DEL1_B3_P2018_2	A	<CN0>	100	PASS	AC=1188;AF=0.23722;AFR_AF=0.3374;AMR_AF=0.2882;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1319;END=58029239;EUR_AF=0.2256;MC=YL_CN_GWD_3915,SI_BD_12226,UW_VH_958;NS=2504;SAS_AF=0.1861;SVTYPE=DEL	GT	0|1
12	58083278	ALU_umary_ALU_9233	G	<INS:ME:ALU>	.	.	AC=1220;AF=0.24361;AFR_AF=0.2239;AMR_AF=0.17;AN=5008;CS=ALU_umary;EAS_AF=0.2996;EUR_AF=0.1849;MEINFO=AluUndef,4,281,+;NS=2504;SAS_AF=0.3252;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAAAAACATTATAGTTTGG	GT	1|0
12	60521816	BI_GS_DEL1_B5_P2020_571	C	<CN0>	100	PASS	AC=1971;AF=0.39357;AFR_AF=0.1097;AMR_AF=0.621;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5337;END=60525034;EUR_AF=0.4722;MC=YL_CN_YRI_3570,UW_VH_959,EM_DL_DEL19481,UW_VH_3034,UW_VH_10408,UW_VH_25248,UW_VH_24935,SI_BD_12235,UW_VH_16742,UW_VH_19222;NS=2504;SAS_AF=0.3906;SVTYPE=DEL	GT	1|1
12	61053825	ALU_umary_ALU_9257	T	<INS:ME:ALU>	.	.	AC=1350;AF=0.269569;AFR_AF=0.4281;AMR_AF=0.2305;AN=5008;CS=ALU_umary;EAS_AF=0.2728;EUR_AF=0.166;MEINFO=AluUndef,26,270,+;NS=2504;SAS_AF=0.1861;SITEPOST=1;SVLEN=244;SVTYPE=ALU;TSD=AAGAATATTT	GT	1|1
12	62295031	DEL_pindel_36368	TCAATTTCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCATATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGAC	T	.	PASS	AC=3476;AF=0.694089;AFR_AF=0.7587;AMR_AF=0.611;AN=5008;CS=DEL_pindel;EAS_AF=0.753;END=62295217;EUR_AF=0.6461;NS=2504;SAS_AF=0.6544;SITEPOST=0.9824;SVTYPE=DEL	GT	1|0
12	71532784	CINV_delly_INV00023088	T	<INV>	.	PASS	AC=1545;AF=0.308506;AFR_AF=0.4077;AMR_AF=0.281;AN=5008;CIEND=-62,62;CIPOS=-62,62;CS=CINV_delly;EAS_AF=0.2014;END=71533816;EUR_AF=0.3698;IMPRECISE;NS=2504;SAS_AF=0.2413;SVTYPE=INV	GT	1|0
12	71602363	BI_GS_DEL1_B2_P2031_416	T	<CN0>	100	PASS	AC=2209;AF=0.441094;AFR_AF=0.7088;AMR_AF=0.3689;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0794;END=71604480;EUR_AF=0.497;MC=UW_VH_962,EM_DL_DEL19776,YL_CN_ACB_3215,YL_CN_KHV_2936,YL_CN_LWK_2729;NS=2504;SAS_AF=0.4458;SVTYPE=DEL	GT	1|0
12	72356517	YL_CN_BEB_2395	T	<CN0>	100	PASS	AC=3786;AF=0.75599;AFR_AF=0.6967;AMR_AF=0.7248;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7917;END=72358157;EUR_AF=0.8231;MC=UW_VH_10807,UW_VH_25109,UW_VH_20952,YL_CN_CHB_2855,YL_CN_CEU_3533,YL_CN_CHS_2920,UW_VH_25377,YL_CN_JPT_3026,UW_VH_13551,UW_VH_17570,BI_GS_DEL1_B1_P2032_280,YL_CN_CLM_2462,YL_CN_ESN_2917,UW_VH_9060,YL_CN_LWK_2731,UW_VH_9511,UW_VH_25209,YL_CN_GIH_2227,UW_VH_16962,UW_VH_4343,UW_VH_13805,YL_CN_PEL_2567,SI_BD_12291,UW_VH_25266,YL_CN_IBS_2576,YL_CN_MSL_2638,UW_VH_25300,YL_CN_YRI_3588,UW_VH_12570,UW_VH_14373,YL_CN_PJL_2940,UW_VH_18734,UW_VH_11577,EM_DL_DEL10236167,YL_CN_ITU_2808,YL_CN_GBR_2774,UW_VH_1340,UW_VH_5640,YL_CN_PUR_3445;NS=2504;SAS_AF=0.7526;SVTYPE=DEL	GT	1|1
12	72739802	DEL_pindel_36548	TCATGGAATGATATGAAAAATTTGCATTTGCTTTTCAAAGGTAGTGACACAGAA	T	.	PASS	AC=1023;AF=0.204273;AFR_AF=0.0318;AMR_AF=0.1888;AN=5008;CS=DEL_pindel;EAS_AF=0.0853;END=72739855;EUR_AF=0.3907;NS=2504;SAS_AF=0.3793;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
12	74104692	UW_VH_1562	T	<CN0>	100	PASS	AC=1153;AF=0.230232;AFR_AF=0.3956;AMR_AF=0.183;AN=5008;CIEND=0,303;CIPOS=-478,0;CS=DEL_union;EAS_AF=0.0546;END=74105402;EUR_AF=0.2256;MC=SI_BD_12297,BI_GS_DEL1_B2_P2034_82;NS=2504;SAS_AF=0.226;SVTYPE=DEL	GT	0|1
12	74571808	DEL_pindel_36591	TAGAGGAGTTGTGGAAGACTGTATTAGGCAAAATGGGGTGGCAAAATTGAGTGGAGGAGATCAAGTTTGAGATGTCTGTTAACTATCCAAATGGATTTGGTAGGTAGGTGTATTAGTCCATTCTCATGCTGCTATAGGACATACCCAAGACTGGGTATTTATAAAGGAAAGAGGATTAACTGATAACACAGTTCTGCAGGGCTGGGAAGGCCTC	T	.	PASS	AC=572;AF=0.114217;AFR_AF=0.09;AMR_AF=0.1441;AN=5008;CS=DEL_pindel;EAS_AF=0.0536;END=74572021;EUR_AF=0.1849;NS=2504;SAS_AF=0.1155;SITEPOST=1;SVTYPE=DEL	GT	1|1
12	75320691	ALU_umary_ALU_9337	T	<INS:ME:ALU>	.	.	AC=1220;AF=0.24361;AFR_AF=0.4002;AMR_AF=0.1945;AN=5008;CS=ALU_umary;EAS_AF=0.0833;EUR_AF=0.2475;MEINFO=AluUndef,3,279,-;NS=2504;SAS_AF=0.228;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=GAAACCATCATTCTT	GT	1|0
12	75931101	ALU_umary_ALU_9345	T	<INS:ME:ALU>	.	.	AC=1480;AF=0.295527;AFR_AF=0.1248;AMR_AF=0.3501;AN=5008;CS=ALU_umary;EAS_AF=0.3304;EUR_AF=0.3728;MEINFO=AluYg6,1,281,-;NS=2504;SAS_AF=0.3722;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GAAGATTATTTTCTTT	GT	0|1
12	77311762	ALU_umary_ALU_9351	T	<INS:ME:ALU>	.	.	AC=144;AF=0.028754;AFR_AF=0.0567;AMR_AF=0.0187;AN=5008;CS=ALU_umary;EAS_AF=0.0119;EUR_AF=0.0358;MEINFO=AluUndef,1,274,-;NS=2504;SAS_AF=0.0082;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=GGACCAAACTTGTTTTT	GT	1|0
12	77908656	DEL_pindel_36668	TATATTTAATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1314;AF=0.26238;AFR_AF=0.3691;AMR_AF=0.3559;AN=5008;CS=DEL_pindel;EAS_AF=0.0347;END=77908979;EUR_AF=0.3171;MEINFO=AluYa5a1,1,281,-;NS=2504;SAS_AF=0.2301;SITEPOST=0.9991;SVTYPE=DEL_ALU	GT	1|0
12	82139688	UW_VH_24823	C	<CN0>	100	PASS	AC=787;AF=0.157149;AFR_AF=0.0083;AMR_AF=0.2133;AN=5008;CIEND=0,367;CIPOS=-298,0;CS=DEL_union;EAS_AF=0.246;END=82144323;EUR_AF=0.2157;MC=YL_CN_MXL_2401,UW_VH_5519,SI_BD_12335,UW_VH_19539,UW_VH_2410,UW_VH_17973,BI_GS_DEL1_B5_P2042_137,EM_DL_DEL19962,UW_VH_5865;NS=2504;SAS_AF=0.1667;SVTYPE=DEL	GT	1|0
12	83844044	DEL_pindel_36790	TAGAACAAGCTCTTAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGAAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2593;AF=0.517772;AFR_AF=0.5946;AMR_AF=0.5432;AN=5008;CS=DEL_pindel;EAS_AF=0.4821;END=83844608;EUR_AF=0.4801;MEINFO=LINE1,5499,5581,+;NS=2504;SAS_AF=0.4714;SITEPOST=0.9909;SVTYPE=DEL_LINE1	GT	1|1
12	84042269	DEL_pindel_36798	TAAAAAAAACAAATTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	.	PASS	AC=1755;AF=0.350439;AFR_AF=0.4334;AMR_AF=0.3746;AN=5008;CS=DEL_pindel;EAS_AF=0.1855;END=84042582;EUR_AF=0.3847;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3558;SITEPOST=0.9992;SVTYPE=DEL_ALU	GT	0|1
12	84086124	ALU_umary_ALU_9388	T	<INS:ME:ALU>	.	.	AC=992;AF=0.198083;AFR_AF=0.1248;AMR_AF=0.2896;AN=5008;CS=ALU_umary;EAS_AF=0.0952;EUR_AF=0.2972;MEINFO=AluYb8,1,271,-;NS=2504;SAS_AF=0.2362;SITEPOST=1;SVLEN=270;SVTYPE=ALU;TSD=CACCAGTTTTTT	GT	1|0
12	84484484	DEL_pindel_36802	TAACTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3974;AF=0.79353;AFR_AF=0.8797;AMR_AF=0.8098;AN=5008;CS=DEL_pindel;EAS_AF=0.7391;END=84484800;EUR_AF=0.7386;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7781;SITEPOST=0.9916;SVTYPE=DEL_ALU	GT	0|1
12	84593115	BI_GS_DEL1_B1_P2044_422	G	<CN0>	100	PASS	AC=653;AF=0.130391;AFR_AF=0.056;AMR_AF=0.2161;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0565;END=84596020;EUR_AF=0.2266;MC=YL_CN_GWD_3950,UW_VH_2328,UW_VH_3035,UW_VH_13890,YL_CN_CDX_2420,SI_BD_12353;NS=2504;SAS_AF=0.1472;SVTYPE=DEL	GT	1|1
12	86523315	DEL_pindel_36845	ACACAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACACGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=3464;AF=0.691693;AFR_AF=0.7292;AMR_AF=0.6138;AN=5008;CS=DEL_pindel;EAS_AF=0.7956;END=86523635;EUR_AF=0.5457;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.7393;SITEPOST=0.9823;SVTYPE=DEL_ALU	GT	1|0
12	86653628	ALU_umary_ALU_9399	A	<INS:ME:ALU>	.	.	AC=2036;AF=0.40655;AFR_AF=0.4107;AMR_AF=0.3732;AN=5008;CS=ALU_umary;EAS_AF=0.4712;EUR_AF=0.3688;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.3967;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=null	GT	1|0
12	88338170	ALU_umary_ALU_9409	G	<INS:ME:ALU>	.	.	AC=2131;AF=0.425519;AFR_AF=0.1944;AMR_AF=0.5418;AN=5008;CS=ALU_umary;EAS_AF=0.4871;EUR_AF=0.5716;MEINFO=AluYa4_5,6,269,+;NS=2504;SAS_AF=0.4417;SITEPOST=1;SVLEN=263;SVTYPE=ALU;TSD=AAAAGAAAATG	GT	0|1
12	94358328	DEL_pindel_36969	TAGAATTAGGAGCTGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAGTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	.	PASS	AC=2893;AF=0.577676;AFR_AF=0.5348;AMR_AF=0.5965;AN=5008;CS=DEL_pindel;EAS_AF=0.7212;END=94358640;EUR_AF=0.4781;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5767;SITEPOST=0.9938;SVTYPE=DEL_ALU	GT	0|1
12	95244023	BI_GS_DEL1_B3_P2055_4	A	<CN0>	100	PASS	AC=2823;AF=0.563698;AFR_AF=0.3321;AMR_AF=0.6859;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5198;END=95244449;EUR_AF=0.7276;MC=DEL_pindel_36990;NS=2504;SAS_AF=0.6667;SVTYPE=DEL	GT	1|1
12	95344056	DEL_pindel_36995	TGGCAACAATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1810;AF=0.361422;AFR_AF=0.413;AMR_AF=0.3473;AN=5008;CS=DEL_pindel;EAS_AF=0.2837;END=95344366;EUR_AF=0.3668;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3763;SITEPOST=0.9988;SVTYPE=DEL_ALU	GT	0|1
12	96010454	BI_GS_DEL1_B1_P2056_4	C	<CN0>	100	PASS	AC=1732;AF=0.345847;AFR_AF=0.4047;AMR_AF=0.33;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3244;END=96012414;EUR_AF=0.3121;MC=EM_DL_DEL10245981,YL_CN_MXL_2417,UW_VH_967,UW_VH_8321;NS=2504;SAS_AF=0.3344;SVTYPE=DEL	GT	0|1
12	96233490	YL_CN_PUR_3473	T	<CN0>	100	PASS	AC=4160;AF=0.830671;AFR_AF=0.8911;AMR_AF=0.8213;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.875;END=96236776;EUR_AF=0.7753;MC=SI_BD_12401;NS=2504;SAS_AF=0.7669;SVTYPE=DEL	GT	1|1
12	97495358	ALU_umary_ALU_9450	G	<INS:ME:ALU>	.	.	AC=1618;AF=0.323083;AFR_AF=0.2088;AMR_AF=0.3199;AN=5008;CS=ALU_umary;EAS_AF=0.379;EUR_AF=0.3549;MEINFO=AluYb8,1,280,+;NS=2504;SAS_AF=0.3896;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAACAAATGTAG	GT	1|0
12	102102410	UW_VH_8768	G	<CN0>	100	PASS	AC=440;AF=0.0878594;AFR_AF=0.0174;AMR_AF=0.1599;AN=5008;CIEND=0,371;CIPOS=-310,0;CS=DEL_union;EAS_AF=0.1161;END=102107115;EUR_AF=0.1133;MC=UW_VH_5379,UW_VH_2253,YL_CN_ESN_2947,UW_VH_11766,BI_GS_DEL1_B1_P2062_88,UW_VH_17641,EM_DL_DEL20945;NS=2504;SAS_AF=0.0767;SVTYPE=DEL	GT	1|0
12	102314060	DEL_pindel_37110	TAAAAAGAGCACTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGC	T	.	PASS	AC=1638;AF=0.327077;AFR_AF=0.5076;AMR_AF=0.232;AN=5008;CS=DEL_pindel;EAS_AF=0.3016;END=102314162;EUR_AF=0.1879;MEINFO=AluYb8,211,282,-;NS=2504;SAS_AF=0.32;SITEPOST=0.9973;SVTYPE=DEL_ALU	GT	1|0
12	106890961	ALU_umary_ALU_9498	T	<INS:ME:ALU>	.	.	AC=1197;AF=0.239018;AFR_AF=0.0333;AMR_AF=0.2594;AN=5008;CS=ALU_umary;EAS_AF=0.5;EUR_AF=0.2157;MEINFO=AluYa5a2,1,281,-;NS=2504;SAS_AF=0.2577;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GTGTTAGCGTATTTT	GT	0|1
12	111976291	UW_VH_2115	A	<CN0>	100	PASS	AC=190;AF=0.0379393;AFR_AF=0.0038;AMR_AF=0.0461;AN=5008;CIEND=0,283;CIPOS=-301,0;CS=DEL_union;EAS_AF=0;END=111980000;EUR_AF=0.1064;MC=BI_GS_DEL1_B5_P2071_1059,YL_CN_TSI_2821,SI_BD_12472;NS=2504;SAS_AF=0.047;SVTYPE=DEL	GT	0|1
12	115023765	DEL_pindel_37371	GCTGAGGTGGGCAGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACC	G	.	PASS	AC=4319;AF=0.86242;AFR_AF=0.6188;AMR_AF=0.9395;AN=5008;CS=DEL_pindel;EAS_AF=0.9921;END=115023828;EUR_AF=0.9374;NS=2504;SAS_AF=0.9264;SITEPOST=1;SVTYPE=DEL	GT	1|1
12	122748410	DUP_gs_CNV_12_122748410_122758684	A	<CN2>	.	PASS	AC=3;AF=0.00059904;AFR_AF=0;AMR_AF=0;AN=5008;CS=DUP_gs;EAS_AF=0;END=122758684;EUR_AF=0.003;NS=2504;SAS_AF=0;SITEPOST=0.9976;SVTYPE=DUP	GT	1|0
12	122947416	DEL_pindel_37516	GACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAA	G	.	PASS	AC=2249;AF=0.449081;AFR_AF=0.2481;AMR_AF=0.4942;AN=5008;CS=DEL_pindel;EAS_AF=0.381;END=122947466;EUR_AF=0.6332;NS=2504;SAS_AF=0.5695;SITEPOST=0.9995;SVTYPE=DEL	GT	0|1
12	123010338	DEL_pindel_37517	TCAACGAAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGTTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=3389;AF=0.676717;AFR_AF=0.7375;AMR_AF=0.5706;AN=5008;CS=DEL_pindel;EAS_AF=0.7312;END=123010667;EUR_AF=0.6163;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.6759;SITEPOST=0.985;SVTYPE=DEL_ALU	GT	1|1
12	124795816	DEL_pindel_37570	TCTGCTATTCTGATCAGCTTCCTGTGCCCCTCGACAGGCCTGGCCAGCTCCCACCTGTGTGTTCCTCCCTGGCAGGTGTGCCACAGACACAGGTGTGGTGGGGTCTCTACCCCTCTGGAGG	T	.	PASS	AC=997;AF=0.199081;AFR_AF=0.2511;AMR_AF=0.0893;AN=5008;CS=DEL_pindel;EAS_AF=0.0883;END=124795936;EUR_AF=0.1491;NS=2504;SAS_AF=0.3722;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
12	127660426	DEL_pindel_37648	TAAAAACTCATTGCTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3582;AF=0.715256;AFR_AF=0.6891;AMR_AF=0.696;AN=5008;CS=DEL_pindel;EAS_AF=0.7242;END=127660752;EUR_AF=0.7545;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7147;SITEPOST=0.9481;SVTYPE=DEL_ALU	GT	1|1
12	127947266	DEL_pindel_37657	AGAAAGGTAAATCAATGACTTCAGGATGTCAGGGCAAACAGGATAGTGGATAG	A	.	PASS	AC=2136;AF=0.426518;AFR_AF=0.289;AMR_AF=0.5317;AN=5008;CS=DEL_pindel;EAS_AF=0.6141;END=127947318;EUR_AF=0.3449;NS=2504;SAS_AF=0.4284;SITEPOST=0.9998;SVTYPE=DEL	GT	1|1
12	128037977	DEL_pindel_37660	TCTGTTTCTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTTTCGCCCAAGCTGGACTGCAGTGGCGCTATCCCGGCTCACTGCAAGCTCCGCCTCTTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGC	T	.	PASS	AC=1203;AF=0.240216;AFR_AF=0.0885;AMR_AF=0.2767;AN=5008;CS=DEL_pindel;EAS_AF=0.3056;END=128038294;EUR_AF=0.3111;MEINFO=AluYb,2,281,-;NS=2504;SAS_AF=0.2791;SITEPOST=0.9996;SVTYPE=DEL_ALU	GT	0|1
12	128932242	DEL_pindel_37675	TTCAAGTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGG	T	.	PASS	AC=1024;AF=0.204473;AFR_AF=0.3449;AMR_AF=0.1916;AN=5008;CS=DEL_pindel;EAS_AF=0.1776;END=128932541;EUR_AF=0.1441;MEINFO=AluYb5,30,281,-;NS=2504;SAS_AF=0.1135;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|0
12	130060287	DEL_pindel_37729	GCAGATAGATACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=3358;AF=0.670527;AFR_AF=0.6278;AMR_AF=0.6916;AN=5008;CS=DEL_pindel;EAS_AF=0.7371;END=130060618;EUR_AF=0.6531;MEINFO=AluYa4b,1,281,-;NS=2504;SAS_AF=0.6626;SITEPOST=0.9767;SVTYPE=DEL_ALU	GT	0|1
12	130455055	ALU_umary_ALU_9581	C	<INS:ME:ALU>	.	.	AC=2033;AF=0.40595;AFR_AF=0.1914;AMR_AF=0.5072;AN=5008;CS=ALU_umary;EAS_AF=0.5069;EUR_AF=0.4771;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4468;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAGGCTC	GT	1|1
12	131093927	DEL_pindel_37750	CCTGACACTGATGTTGGCAGGGCCTTGATTAACCCTCCTTGGTGATATGGTCAGAGGGACCCCGACCCCCAGAGGAGAACTGAGCCACCTGGGGGACCTTCTCTGGTGAGGTCGGGGGTCAGGAAATGTTGGGCCTGGGTCACTTTCTTCTGTTGGATGGAAGCGGGGTGGTTAGTCAGGGTTCCCTGGAGAAACAGGACAGGATAGATACACATGAAGATACTTATTTGGGGAGTTTCCTCGTGTGATTACAGAGGCCAATAAGTCCCATGATCTGCCGTCTGGAGAGCCAGGAATA	C	.	PASS	AC=169;AF=0.033746;AFR_AF=0.056;AMR_AF=0.0259;AN=5008;CS=DEL_pindel;EAS_AF=0;END=131094224;EUR_AF=0.0586;NS=2504;SAS_AF=0.0184;SITEPOST=0.9994;SVTYPE=DEL	GT	1|0
12	133469012	ALU_umary_ALU_9589	T	<INS:ME:ALU>	.	.	AC=493;AF=0.0984425;AFR_AF=0.0091;AMR_AF=0.1556;AN=5008;CS=ALU_umary;EAS_AF=0.0863;EUR_AF=0.1471;MEINFO=AluUndef,80,279,-;NS=2504;SAS_AF=0.1411;SITEPOST=1;SVLEN=199;SVTYPE=ALU;TSD=GACAACATTCTTTT	GT	1|0
13	19201274	BI_GS_DEL1_B5_P2113_25	G	<CN0>	100	PASS	AC=335;AF=0.066893;AFR_AF=0.0144;AMR_AF=0.1254;AN=5008;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0;END=19204213;EUR_AF=0.1909;MC=YL_CN_CLM_2540,YL_CN_FIN_2708,UW_VH_33;NS=2504;SAS_AF=0.0378;SVTYPE=DEL	GT	0|1
13	21124682	DEL_pindel_37877	AGTTACTACTGTTACTACTTGAGACAGTTACTACTGTTACTACTTGAGACAGTTACTACTGTTACTACTTGAGAC	A	.	PASS	AC=353;AF=0.0704872;AFR_AF=0.1082;AMR_AF=0.0937;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=21124756;EUR_AF=0.0855;NS=2504;SAS_AF=0.0593;SITEPOST=0.9992;SVTYPE=DEL	GT	1|0
13	21894780	ALU_umary_ALU_9602	T	<INS:ME:ALU>	.	.	AC=1531;AF=0.305711;AFR_AF=0.2897;AMR_AF=0.2565;AN=5008;CS=ALU_umary;EAS_AF=0.2173;EUR_AF=0.3966;MEINFO=AluYb7_2,13,281,-;NS=2504;SAS_AF=0.3599;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=ACCGACCAAGACTTCT	GT	1|1
13	22052127	YL_CN_FIN_2719	T	<CN0>	100	PASS	AC=10;AF=0.00199681;AFR_AF=0;AMR_AF=0.0029;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=22055126;EUR_AF=0.008;MC=EM_DL_DEL24052,BI_GS_DEL1_B1_P2116_36,UW_VH_34;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	1|0
13	22530362	ALU_umary_ALU_9609	G	<INS:ME:ALU>	.	.	AC=1195;AF=0.238618;AFR_AF=0.1051;AMR_AF=0.268;AN=5008;CS=ALU_umary;EAS_AF=0.246;EUR_AF=0.3489;MEINFO=AluUndef,1,278,+;NS=2504;SAS_AF=0.2771;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAAAAACCATCAG	GT	1|0
13	22574676	DEL_pindel_37915	TCAATAAAACCTTGCACTCATTCTCCAAGCCCAGGTGTGATCCGATTCATCCTGTACACCAAGGCAGGGATAAAGAAAGCCCTCTGTCCCTGCCA	T	.	PASS	AC=548;AF=0.109425;AFR_AF=0.0643;AMR_AF=0.0447;AN=5008;CS=DEL_pindel;EAS_AF=0.0685;END=22574770;EUR_AF=0.0855;NS=2504;SAS_AF=0.2832;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
13	23055208	DEL_pindel_37924	TTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTC	T	.	PASS	AC=1824;AF=0.364217;AFR_AF=0.1415;AMR_AF=0.5663;AN=5008;CS=DEL_pindel;EAS_AF=0.3631;END=23055515;EUR_AF=0.5129;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3701;SITEPOST=0.9889;SVTYPE=DEL_ALU	GT	0|1
13	23632424	UW_VH_2689	G	<CN0>	100	PASS	AC=643;AF=0.128395;AFR_AF=0.0257;AMR_AF=0.1916;AN=5008;CIEND=0,311;CIPOS=-361,0;CS=DEL_union;EAS_AF=0.001;END=23637293;EUR_AF=0.2873;MC=EM_DL_DEL24179,SI_BD_12746,YL_CN_ASW_2984,BI_GS_DEL1_B1_P2117_470;NS=2504;SAS_AF=0.1902;SVTYPE=DEL	GT	1|0
13	24057640	DEL_pindel_37941	TCAGCTTGCAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=2817;AF=0.5625;AFR_AF=0.6293;AMR_AF=0.4928;AN=5008;CS=DEL_pindel;EAS_AF=0.5883;END=24057972;EUR_AF=0.5567;MEINFO=AluYb3a1,2,281,-;NS=2504;SAS_AF=0.501;SITEPOST=0.99085;SVTYPE=DEL_ALU	GT	0|1
13	24631697	UW_VH_2840	T	<CN0>	100	PASS	AC=77;AF=0.0153754;AFR_AF=0.0023;AMR_AF=0.0159;AN=5008;CIEND=0,361;CIPOS=-325,0;CS=DEL_union;EAS_AF=0.002;END=24633601;EUR_AF=0.0328;MC=SI_BD_12756,BI_GS_DEL1_B1_P2118_571,EM_DL_DEL24213;NS=2504;SAS_AF=0.0286;SVTYPE=DEL	GT	0|1
13	25270559	DEL_pindel_37980	GGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGGGGAGA	G	.	PASS	AC=1749;AF=0.349241;AFR_AF=0.2874;AMR_AF=0.3847;AN=5008;CS=DEL_pindel;EAS_AF=0.4643;END=25270895;EUR_AF=0.2386;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4029;SITEPOST=0.999;SVTYPE=DEL_ALU	GT	0|1
13	25721017	DEL_pindel_37990	AAAAAATTAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAG	A	.	PASS	AC=3399;AF=0.678714;AFR_AF=0.7413;AMR_AF=0.6614;AN=5008;CS=DEL_pindel;EAS_AF=0.6478;END=25721336;EUR_AF=0.7177;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.5982;SITEPOST=0.9848;SVTYPE=DEL_ALU	GT	1|0
13	27050020	BI_GS_DEL1_B2_P2121_39	A	<CN0>	100	PASS	AC=1309;AF=0.261382;AFR_AF=0.0204;AMR_AF=0.3746;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.2917;END=27052181;EUR_AF=0.4066;MC=YL_CN_CEU_3625,YL_CN_CLM_2555,EM_DL_DEL24274,UW_VH_986,SI_BD_12770;NS=2504;SAS_AF=0.3262;SVTYPE=DEL	GT	1|0
13	29891562	DEL_pindel_38048	TCTCTCTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCCATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=3387;AF=0.676318;AFR_AF=0.5408;AMR_AF=0.7334;AN=5008;CS=DEL_pindel;EAS_AF=0.7629;END=29891873;EUR_AF=0.66;MEINFO=AluYb3a1,2,281,-;NS=2504;SAS_AF=0.7464;SITEPOST=0.9732;SVTYPE=DEL_ALU	GT	1|0
13	36818914	DEL_pindel_38182	CAGTGGTCTTGGGGACTCTGACAGTATAGAATTCTTCTAGTGAACCACTGAATATGGATGGG	C	.	PASS	AC=1873;AF=0.374002;AFR_AF=0.4637;AMR_AF=0.366;AN=5008;CS=DEL_pindel;EAS_AF=0.376;END=36818975;EUR_AF=0.2992;NS=2504;SAS_AF=0.3333;SITEPOST=0.9953;SVTYPE=DEL	GT	1|0
13	37414451	BI_GS_DEL1_B4_P2131_83	C	<CN0>	100	PASS	AC=2857;AF=0.570487;AFR_AF=0.3502;AMR_AF=0.745;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5536;END=37414779;EUR_AF=0.7416;MC=DEL_pindel_38193;NS=2504;SAS_AF=0.5859;SVTYPE=DEL	GT	1|0
13	37949998	ALU_umary_ALU_9699	T	<INS:ME:ALU>	.	.	AC=786;AF=0.156949;AFR_AF=0.1452;AMR_AF=0.1383;AN=5008;CS=ALU_umary;EAS_AF=0.1756;EUR_AF=0.2237;MEINFO=AluUndef,79,281,-;NS=2504;SAS_AF=0.0982;SITEPOST=1;SVLEN=202;SVTYPE=ALU;TSD=CCTTTATTTATTTTTTT	GT	1|1
13	38071941	BI_GS_DEL1_B5_P2132_89	G	<CN0>	100	PASS	AC=1363;AF=0.272165;AFR_AF=0.1339;AMR_AF=0.3127;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2361;END=38085578;EUR_AF=0.3429;MC=YL_CN_MSL_2723,UW_VH_2160,UW_VH_11953,UW_VH_25161,UW_VH_5812,UW_VH_11026,UW_VH_16169,UW_VH_14313;NS=2504;SAS_AF=0.3947;SVTYPE=DEL	GT	0|1
13	39057317	BI_GS_DEL1_B5_P2133_62	G	<CN0>	100	PASS	AC=1900;AF=0.379393;AFR_AF=0.2126;AMR_AF=0.4784;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3155;END=39060204;EUR_AF=0.659;MC=UW_VH_23259,EM_DL_DEL24542,YL_CN_GIH_2304,UW_VH_21192,YL_CN_MXL_2481,UW_VH_1574,YL_CN_PJL_3031,SI_BD_12823,YL_CN_BEB_2480;NS=2504;SAS_AF=0.3129;SVTYPE=DEL	GT	0|1
13	39499637	ALU_umary_ALU_9708	A	<INS:ME:ALU>	.	.	AC=955;AF=0.190695;AFR_AF=0.1014;AMR_AF=0.1657;AN=5008;CS=ALU_umary;EAS_AF=0.2996;EUR_AF=0.2744;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.1309;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GAAAGTAGAGAGTTGA	GT	1|0
13	39934236	SI_BD_12828	C	<CN0>	100	PASS	AC=2712;AF=0.541534;AFR_AF=0.3389;AMR_AF=0.621;AN=5008;CIEND=-123,330;CIPOS=-330,50;CS=DEL_union;EAS_AF=0.6548;END=39935552;EUR_AF=0.6193;MC=YL_CN_TSI_2894,YL_CN_GWD_4052,YL_CN_ITU_2901,YL_CN_GBR_2877,YL_CN_YRI_3728,YL_CN_CEU_3641,YL_CN_PUR_3573,YL_CN_STU_2925,YL_CN_PEL_2671,YL_CN_CHS_3049,YL_CN_CHB_2958,YL_CN_PJL_3033,YL_CN_KHV_3035,YL_CN_BEB_2482,EM_DL_DEL10271859,BI_GS_DEL1_B2_P2133_672;NS=2504;SAS_AF=0.5624;SVTYPE=DEL	GT	0|1
13	42726801	ALU_umary_ALU_9726	T	<INS:ME:ALU>	.	.	AC=360;AF=0.071885;AFR_AF=0.0068;AMR_AF=0.1571;AN=5008;CS=ALU_umary;EAS_AF=0.0139;EUR_AF=0.1213;MEINFO=AluYb7_2,1,270,-;NS=2504;SAS_AF=0.1084;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=GACCTCTTTATTCTT	GT	1|0
13	42771403	L1_umary_LINE1_2401	A	<INS:ME:LINE1>	.	.	AC=717;AF=0.143171;AFR_AF=0.059;AMR_AF=0.2046;AN=5008;CS=L1_umary;EAS_AF=0.0784;EUR_AF=0.2207;MEINFO=LINE1,5653,6018,+;NS=2504;SAS_AF=0.2004;SITEPOST=1;SVLEN=365;SVTYPE=LINE1;TSD=AAAAAAAAAAAAAA	GT	1|1
13	42946047	DEL_pindel_38282	GGCAATGGGTTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=3149;AF=0.628794;AFR_AF=0.6248;AMR_AF=0.6398;AN=5008;CS=DEL_pindel;EAS_AF=0.6161;END=42946378;EUR_AF=0.6213;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.6472;SITEPOST=0.9773;SVTYPE=DEL_ALU	GT	1|0
13	43053246	BI_GS_DEL1_B3_P2137_5	G	<CN0>	100	PASS	AC=841;AF=0.167931;AFR_AF=0.0696;AMR_AF=0.1182;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1696;END=43053893;EUR_AF=0.2207;MC=BI_GS_DEL1_B5_P2137_51,UW_VH_2255,SI_BD_12843;NS=2504;SAS_AF=0.2802;SVTYPE=DEL	GT	1|0
13	46719751	DEL_pindel_38350	TAAAAGAGGGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1049;AF=0.209465;AFR_AF=0.3933;AMR_AF=0.3141;AN=5008;CS=DEL_pindel;EAS_AF=0.0764;END=46720077;EUR_AF=0.1889;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.045;SITEPOST=0.99855;SVTYPE=DEL_ALU	GT	0|1
13	48015694	DEL_pindel_38377	TATGTACATATATCATATGTACAATTCATGTACATATATCATATGTACAATTCATGTACATATATCATATGTACAATTCATGTACATATATCATATGTACAATTC	T	.	PASS	AC=1858;AF=0.371006;AFR_AF=0.3026;AMR_AF=0.3934;AN=5008;CS=DEL_pindel;EAS_AF=0.371;END=48015798;EUR_AF=0.3976;NS=2504;SAS_AF=0.4202;SITEPOST=0.99735;SVTYPE=DEL	GT	1|0
13	48419925	DEL_pindel_38386	GGCCACAGGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGCGGCGGAGCTTGCAGTGAGCCGATATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	G	.	PASS	AC=2074;AF=0.414137;AFR_AF=0.503;AMR_AF=0.4496;AN=5008;CS=DEL_pindel;EAS_AF=0.4077;END=48420081;EUR_AF=0.3479;MEINFO=AluYa,148,281,+;NS=2504;SAS_AF=0.3436;SITEPOST=0.9996;SVTYPE=DEL_ALU	GT	0|1
13	49533344	UW_VH_2841	A	<CN0>	100	PASS	AC=1880;AF=0.375399;AFR_AF=0.2693;AMR_AF=0.3674;AN=5008;CIEND=0,311;CIPOS=-432,0;CS=DEL_union;EAS_AF=0.4097;END=49536617;EUR_AF=0.3638;MC=EM_DL_DEL24773,YL_CN_CLM_2574,SI_BD_12888,BI_GS_DEL1_B1_P2143_517;NS=2504;SAS_AF=0.501;SVTYPE=DEL	GT	0|1
13	49951399	BI_GS_DEL1_B4_P2143_192	A	<CN0>	100	PASS	AC=2485;AF=0.496206;AFR_AF=0.7436;AMR_AF=0.4784;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1478;END=49953862;EUR_AF=0.5139;NS=2504;SAS_AF=0.5153;SVTYPE=DEL	GT	0|1
13	51069347	BI_GS_DEL1_B1_P2145_60	G	<CN0>	100	PASS	AC=3890;AF=0.776757;AFR_AF=0.6793;AMR_AF=0.7939;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8492;END=51075082;EUR_AF=0.7565;MC=EM_DL_DEL24962,SI_BD_12896,YL_CN_GBR_2889,UW_VH_3036;NS=2504;SAS_AF=0.8425;SVTYPE=DEL	GT	1|1
13	51551934	DEL_pindel_38435	TCCCAGTTAATGCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1737;AF=0.346845;AFR_AF=0.5053;AMR_AF=0.3689;AN=5008;CS=DEL_pindel;EAS_AF=0.3938;END=51552263;EUR_AF=0.2525;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.1656;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	0|1
13	52852412	DUP_gs_CNV_13_52852412_52864557	G	<CN0>,<CN2>	.	PASS	AC=17,1201;AF=0.00339457,0.239816;AFR_AF=0.0098,0.0643;AMR_AF=0,0.3199;AN=5008;CS=DUP_gs;EAS_AF=0.002,0.1746;END=52864557;EUR_AF=0.001,0.4433;NS=2504;SAS_AF=0.001,0.2781;SITEPOST=1;SVTYPE=CNV	GT	0|2
13	54606529	ALU_umary_ALU_9795	T	<INS:ME:ALU>	.	.	AC=665;AF=0.132788;AFR_AF=0.1074;AMR_AF=0.2003;AN=5008;CS=ALU_umary;EAS_AF=0.0933;EUR_AF=0.1183;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1748;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TATCAGTCCCTTCTT	GT	0|1
13	55941166	BI_GS_DEL1_B5_P2149_924	C	<CN0>	100	PASS	AC=2888;AF=0.576677;AFR_AF=0.2958;AMR_AF=0.6873;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.6944;END=55941469;EUR_AF=0.7545;MC=SI_BD_12913,UW_VH_999,DEL_pindel_38511;NS=2504;SAS_AF=0.5736;SVTYPE=DEL	GT	1|1
13	56151096	DEL_pindel_38514	TGTGCTCTAGCTTATGCACAGAGGTCAAGATCCCTTCCCCAACTCTCCACACTGCTGCAGCCACTGCTGCCTCTGAAAGCCAAAGCAAGCAAACCTTAAATCTGAGAGTCTGGGTATGTAAACA	T	.	PASS	AC=3363;AF=0.671526;AFR_AF=0.4486;AMR_AF=0.7853;AN=5008;CS=DEL_pindel;EAS_AF=0.872;END=56151219;EUR_AF=0.7744;NS=2504;SAS_AF=0.5798;SITEPOST=0.9999;SVTYPE=DEL	GT	1|1
13	56186576	ALU_umary_ALU_9803	T	<INS:ME:ALU>	.	.	AC=2478;AF=0.494808;AFR_AF=0.2761;AMR_AF=0.5403;AN=5008;CS=ALU_umary;EAS_AF=0.6726;EUR_AF=0.6064;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4601;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TAAAAGTTTTTTTTTTT	GT	1|1
13	57787093	BI_GS_DEL1_B1_P2151_487	A	<CN0>	100	PASS	AC=2147;AF=0.428714;AFR_AF=0.7262;AMR_AF=0.2363;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5169;END=57788378;EUR_AF=0.2674;MC=YL_CN_CLM_2592,YL_CN_CDX_2521,YL_CN_KHV_3062,YL_CN_STU_2958,SI_BD_12925,UW_VH_2412,YL_CN_PUR_3601,YL_CN_BEB_2511,YL_CN_TSI_2927,YL_CN_CHB_2984,YL_CN_ITU_2931;NS=2504;SAS_AF=0.2382;SVTYPE=DEL	GT	1|0
13	57975500	DEL_pindel_38550	AGATATACTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2706;AF=0.540335;AFR_AF=0.6505;AMR_AF=0.3919;AN=5008;CS=DEL_pindel;EAS_AF=0.4603;END=57975848;EUR_AF=0.5447;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.5746;SITEPOST=0.9916;SVTYPE=DEL_ALU	GT	1|0
13	59396895	ALU_umary_ALU_9821	T	<INS:ME:ALU>	.	.	AC=3067;AF=0.61242;AFR_AF=0.6362;AMR_AF=0.5865;AN=5008;CS=ALU_umary;EAS_AF=0.5823;EUR_AF=0.6322;MEINFO=AluYg6a2,2,281,-;NS=2504;SAS_AF=0.6094;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GAGTGTTACAGTTCTT	GT	1|1
13	60172490	DEL_pindel_38601	TAAGATCATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAATAAAAAATAAAAAAAACAAAACAAAAAA	T	.	PASS	AC=3823;AF=0.763379;AFR_AF=0.6831;AMR_AF=0.7983;AN=5008;CS=DEL_pindel;EAS_AF=0.7321;END=60172823;EUR_AF=0.8489;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7914;SITEPOST=0.9935;SVTYPE=DEL_ALU	GT	1|1
13	61462344	L1_umary_LINE1_2422	T	<INS:ME:LINE1>	.	.	AC=2500;AF=0.499201;AFR_AF=0.3071;AMR_AF=0.5288;AN=5008;CS=L1_umary;EAS_AF=0.7599;EUR_AF=0.5219;MEINFO=LINE1,1,6019,-;NS=2504;SAS_AF=0.4458;SITEPOST=1;SVLEN=6018;SVTYPE=LINE1;TSD=TCTTCTCTTTTTT	GT	1|1
13	61734497	L1_umary_LINE1_2424	A	<INS:ME:LINE1>	.	.	AC=1566;AF=0.3127;AFR_AF=0.3601;AMR_AF=0.2795;AN=5008;CS=L1_umary;EAS_AF=0.3194;EUR_AF=0.3519;MEINFO=LINE1,5174,6018,+;NS=2504;SAS_AF=0.2249;SITEPOST=1;SVLEN=844;SVTYPE=LINE1;TSD=AAGAGTTTGGGGA	GT	1|1
13	61787418	ALU_umary_ALU_9841	T	<INS:ME:ALU>	.	.	AC=1244;AF=0.248403;AFR_AF=0.4032;AMR_AF=0.2277;AN=5008;CS=ALU_umary;EAS_AF=0.1984;EUR_AF=0.2058;MEINFO=AluYa4_2,1,281,+;NS=2504;SAS_AF=0.1493;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAATTTAATTATTTTT	GT	1|0
13	64162211	NUMT_umich_44	T	<INS:MT>	168	PASS	AC=136;AF=0.0271566;AFR_AF=0.0787;AMR_AF=0.0086;AN=5008;CIEND=-3,0;CIPOS=0,3;CS=NUMT_umich;EAS_AF=0.001;END=64162213;EUR_AF=0.006;MEND=9407;MLEN=74;MSTART=9334;NS=2504;SAS_AF=0.0194;SVTYPE=INS	GT	1|0
13	65342437	BI_GS_DEL1_B3_P2159_11	T	<CN0>	100	PASS	AC=667;AF=0.133187;AFR_AF=0.0658;AMR_AF=0.1354;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.005;END=65344433;EUR_AF=0.2505;MC=YL_CN_BEB_2526,YL_CN_CLM_2600,UW_VH_2330,YL_CN_CEU_3673,YL_CN_TSI_2943,SI_BD_12969;NS=2504;SAS_AF=0.2342;SVTYPE=DEL	GT	0|1
13	65637801	UW_VH_1004	T	<CN0>	100	PASS	AC=3027;AF=0.604433;AFR_AF=0.2421;AMR_AF=0.6167;AN=5008;CIEND=0,485;CIPOS=-537,0;CS=DEL_union;EAS_AF=0.876;END=65638216;EUR_AF=0.669;MC=BI_GS_DEL1_B5_P2159_593,DEL_pindel_38676;NS=2504;SAS_AF=0.7393;SVTYPE=DEL	GT	1|1
13	67903471	ALU_umary_ALU_9886	T	<INS:ME:ALU>	.	.	AC=2494;AF=0.498003;AFR_AF=0.497;AMR_AF=0.4625;AN=5008;CS=ALU_umary;EAS_AF=0.5397;EUR_AF=0.494;MEINFO=AluUndef,78,279,-;NS=2504;SAS_AF=0.4857;SITEPOST=1;SVLEN=201;SVTYPE=ALU;TSD=TATCTATCTGTATTCTT	GT	1|0
13	67950542	DEL_pindel_38717	TGCTATCACTGAAATGTACTACTTTGACTTTGTAAAATTAGCCAGTCCTGACA	T	.	PASS	AC=2411;AF=0.48143;AFR_AF=0.4758;AMR_AF=0.4885;AN=5008;CS=DEL_pindel;EAS_AF=0.4812;END=67950594;EUR_AF=0.4722;NS=2504;SAS_AF=0.4939;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
13	68977877	BI_GS_DEL1_B2_P2162_623	A	<CN0>	100	PASS	AC=1471;AF=0.29373;AFR_AF=0.351;AMR_AF=0.2738;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1875;END=68978201;EUR_AF=0.3598;MC=UW_VH_25019,DEL_pindel_38744;NS=2504;SAS_AF=0.272;SVTYPE=DEL	GT	0|1
13	69966662	DEL_pindel_38762	AAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG	A	.	PASS	AC=4550;AF=0.908546;AFR_AF=0.8623;AMR_AF=0.9308;AN=5008;CS=DEL_pindel;EAS_AF=0.9097;END=69966961;EUR_AF=0.9414;MEINFO=AluY,23,281,-;NS=2504;SAS_AF=0.9202;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|1
13	70079642	DEL_pindel_38766	GTGTGTGTATGTATGTGTATATATATATATATATATATATATATATATATATATA	G	.	PASS	AC=1948;AF=0.388978;AFR_AF=0.3631;AMR_AF=0.3473;AN=5008;CS=DEL_pindel;EAS_AF=0.3909;END=70079696;EUR_AF=0.4473;NS=2504;SAS_AF=0.3916;SITEPOST=0.9705;SVTYPE=DEL	GT	1|0
13	72386637	DEL_pindel_38818	GCATCAAAATGGCACCATCAGAAACACATCAAAATGGCACCATCAGAAACA	G	.	PASS	AC=1055;AF=0.210663;AFR_AF=0.149;AMR_AF=0.2406;AN=5008;CS=DEL_pindel;EAS_AF=0.1091;END=72386687;EUR_AF=0.3419;NS=2504;SAS_AF=0.2423;SITEPOST=0.9975;SVTYPE=DEL	GT	0|1
13	72477264	BI_GS_DEL1_B1_P2166_364	C	<CN0>	100	PASS	AC=1619;AF=0.323283;AFR_AF=0.2156;AMR_AF=0.4395;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0714;END=72480580;EUR_AF=0.5467;MC=UW_VH_10149,UW_VH_17395,YL_CN_MSL_2774,SI_BD_13026,UW_VH_15273,EM_DL_DEL25549,UW_VH_6584,UW_VH_1010;NS=2504;SAS_AF=0.4162;SVTYPE=DEL	GT	1|1
13	72478323	UW_VH_21052	T	<CN0>	100	PASS	AC=252;AF=0.0503195;AFR_AF=0.0061;AMR_AF=0.0793;AN=5008;CIEND=0,233;CIPOS=-177,0;CS=DEL_union;EAS_AF=0.001;END=72482473;EUR_AF=0.1143;MC=YL_CN_CHB_3002;NS=2504;SAS_AF=0.0746;SVTYPE=DEL	GT	0|1
13	72843031	UW_VH_1012	C	<CN0>	100	PASS	AC=2437;AF=0.486621;AFR_AF=0.1952;AMR_AF=0.7133;AN=5008;CIEND=0,448;CIPOS=-432,0;CS=DEL_union;EAS_AF=0.4206;END=72846923;EUR_AF=0.6889;MC=BI_GS_DEL1_B2_P2166_561,YL_CN_CHS_3100,UW_VH_10926,UW_VH_11133,SI_BD_13031;NS=2504;SAS_AF=0.5798;SVTYPE=DEL	GT	1|0
13	72893591	UW_VH_3329	A	<CN0>	100	PASS	AC=28;AF=0.00559105;AFR_AF=0.0008;AMR_AF=0.0072;AN=5008;CIEND=0,333;CIPOS=-276,0;CS=DEL_union;EAS_AF=0;END=72898446;EUR_AF=0.0159;MC=BI_GS_DEL1_B3_P2166_37,EM_DL_DEL25561,YL_CN_TSI_2961;NS=2504;SAS_AF=0.0061;SVTYPE=DEL	GT	0|1
13	74074911	DEL_pindel_38839	TCTATCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGTAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCTATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3433;AF=0.685503;AFR_AF=0.7148;AMR_AF=0.7349;AN=5008;CS=DEL_pindel;EAS_AF=0.5109;END=74075239;EUR_AF=0.7256;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7495;SITEPOST=0.9971;SVTYPE=DEL_ALU	GT	1|1
13	75625199	DEL_pindel_38865	CATGTACATTAGCACTAGCCATCCATTTCTGGGCCACACAGATGCACACTGCCACTTCAATGTTTCACTGAAAGTAGGG	C	.	PASS	AC=2128;AF=0.42492;AFR_AF=0.18;AMR_AF=0.5317;AN=5008;CS=DEL_pindel;EAS_AF=0.5476;END=75625277;EUR_AF=0.5785;NS=2504;SAS_AF=0.3957;SITEPOST=1;SVTYPE=DEL	GT	1|1
13	76639273	DEL_pindel_38892	TAGGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAACCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2153;AF=0.429912;AFR_AF=0.292;AMR_AF=0.5159;AN=5008;CS=DEL_pindel;EAS_AF=0.4921;END=76639600;EUR_AF=0.4543;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.4663;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	1|0
13	78997598	BI_GS_DEL1_B4_P2172_239	A	<CN0>	100	PASS	AC=1393;AF=0.278155;AFR_AF=0.09;AMR_AF=0.4452;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4573;END=78998715;EUR_AF=0.2425;MC=SI_BD_13061,UW_VH_5105,UW_VH_14513;NS=2504;SAS_AF=0.2658;SVTYPE=DEL	GT	1|0
13	79259800	L1_umary_LINE1_2461	T	<INS:ME:LINE1>	.	.	AC=3937;AF=0.786142;AFR_AF=0.7209;AMR_AF=0.8184;AN=5008;CS=L1_umary;EAS_AF=0.8433;EUR_AF=0.8211;MEINFO=LINE1,4182,6010,-;NS=2504;SAS_AF=0.7566;SITEPOST=1;SVLEN=1828;SVTYPE=LINE1;TSD=TAAACACAGTTTT	GT	1|1
13	79271601	ALU_umary_ALU_9947	C	<INS:ME:ALU>	.	.	AC=2937;AF=0.586462;AFR_AF=0.5401;AMR_AF=0.5951;AN=5008;CS=ALU_umary;EAS_AF=0.6171;EUR_AF=0.6153;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.5818;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AGAAATGGGCATATTC	GT	1|0
13	79661067	DEL_pindel_38962	TATGACATCACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2418;AF=0.482827;AFR_AF=0.5159;AMR_AF=0.4092;AN=5008;CS=DEL_pindel;EAS_AF=0.5387;END=79661402;EUR_AF=0.4414;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4755;SITEPOST=0.9976;SVTYPE=DEL_ALU	GT	0|1
13	80678313	DEL_pindel_38979	TCTAATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCGCGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=1413;AF=0.282149;AFR_AF=0.2912;AMR_AF=0.3833;AN=5008;CS=DEL_pindel;EAS_AF=0.3452;END=80678630;EUR_AF=0.2724;MEINFO=AluYh7,2,281,-;NS=2504;SAS_AF=0.1431;SITEPOST=0.9992;SVTYPE=DEL_ALU	GT	0|1
13	81373740	ALU_umary_ALU_9959	A	<INS:ME:ALU>	.	.	AC=358;AF=0.0714856;AFR_AF=0.0242;AMR_AF=0.0749;AN=5008;CS=ALU_umary;EAS_AF=0.0655;EUR_AF=0.165;MEINFO=AluUndef,1,228,+;NS=2504;SAS_AF=0.0429;SITEPOST=1;SVLEN=227;SVTYPE=ALU;TSD=AAAAATATAGAATGAACTGAGAAA	GT	1|0
13	81747236	DEL_pindel_39001	TTCAGCTCACCAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3115;AF=0.622005;AFR_AF=0.5378;AMR_AF=0.6383;AN=5008;CS=DEL_pindel;EAS_AF=0.6597;END=81747564;EUR_AF=0.6501;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6564;SITEPOST=0.97915;SVTYPE=DEL_ALU	GT	0|1
13	82355641	DEL_pindel_39018	GTATTGGCTTGGTTATGGGTACTCTCTTGAGCTCTGCCAACTGAACAGATAGAACA	G	.	PASS	AC=2413;AF=0.481829;AFR_AF=0.4773;AMR_AF=0.4827;AN=5008;CS=DEL_pindel;EAS_AF=0.4881;END=82355696;EUR_AF=0.4702;NS=2504;SAS_AF=0.4928;SITEPOST=0.9911;SVTYPE=DEL	GT	0|1
13	83179448	DEL_pindel_39039	TTATTTTTAATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2456;AF=0.490415;AFR_AF=0.5098;AMR_AF=0.4049;AN=5008;CS=DEL_pindel;EAS_AF=0.4891;END=83179755;EUR_AF=0.507;MEINFO=AluYa5c1,1,281,-;NS=2504;SAS_AF=0.5092;SITEPOST=0.9901;SVTYPE=DEL_ALU	GT	1|1
13	85270032	DEL_pindel_39101	GTATATATATATATATATATATATATATATATATATATATATATATATATATA	G	.	PASS	AC=1458;AF=0.291134;AFR_AF=0.3843;AMR_AF=0.2536;AN=5008;CS=DEL_pindel;EAS_AF=0.1478;END=85270084;EUR_AF=0.3539;NS=2504;SAS_AF=0.2751;SITEPOST=0.9959;SVTYPE=DEL	GT	0|1
13	85871612	L1_umary_LINE1_2467	T	<INS:ME:LINE1>	.	.	AC=2298;AF=0.458866;AFR_AF=0.407;AMR_AF=0.4741;AN=5008;CS=L1_umary;EAS_AF=0.3442;EUR_AF=0.5825;MEINFO=LINE1,5297,5937,-;NS=2504;SAS_AF=0.5092;SITEPOST=1;SVLEN=640;SVTYPE=LINE1;TSD=ATATTTTCTTT	GT	1|1
13	86166446	ALU_umary_ALU_9989	T	<INS:ME:ALU>	.	.	AC=1227;AF=0.245008;AFR_AF=0.0832;AMR_AF=0.2277;AN=5008;CS=ALU_umary;EAS_AF=0.3333;EUR_AF=0.2893;MEINFO=AluUndef,132,281,-;NS=2504;SAS_AF=0.3395;SITEPOST=1;SVLEN=149;SVTYPE=ALU;TSD=TT	GT	1|0
13	86340152	L1_umary_LINE1_2470	G	<INS:ME:LINE1>	.	.	AC=1685;AF=0.336462;AFR_AF=0.1384;AMR_AF=0.3473;AN=5008;CS=L1_umary;EAS_AF=0.622;EUR_AF=0.3022;MEINFO=LINE1,5386,6018,-;NS=2504;SAS_AF=0.3374;SITEPOST=1;SVLEN=632;SVTYPE=LINE1;TSD=null	GT	1|0
13	87392969	ALU_umary_ALU_9995	T	<INS:ME:ALU>	.	.	AC=2367;AF=0.472644;AFR_AF=0.3623;AMR_AF=0.4712;AN=5008;CS=ALU_umary;EAS_AF=0.5119;EUR_AF=0.5229;MEINFO=AluYa5,27,281,-;NS=2504;SAS_AF=0.5307;SITEPOST=1;SVLEN=254;SVTYPE=ALU;TSD=CTTTTAACTGAACATTTCTAATTTT	GT	1|1
13	87696257	ALU_umary_ALU_9998	A	<INS:ME:ALU>	.	.	AC=1550;AF=0.309505;AFR_AF=0.2383;AMR_AF=0.3256;AN=5008;CS=ALU_umary;EAS_AF=0.2629;EUR_AF=0.4344;MEINFO=AluUndef,45,268,+;NS=2504;SAS_AF=0.3139;SITEPOST=1;SVLEN=223;SVTYPE=ALU;TSD=AAAGAACTCTCCACCCCA	GT	1|1
13	89003264	DEL_pindel_39167	TCTAAATCTAGTATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=3519;AF=0.702676;AFR_AF=0.6853;AMR_AF=0.719;AN=5008;CS=DEL_pindel;EAS_AF=0.7282;END=89003600;EUR_AF=0.7068;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.684;SITEPOST=0.9313;SVTYPE=DEL_ALU	GT	1|0
13	90401846	ALU_umary_ALU_10012	A	<INS:ME:ALU>	.	.	AC=1470;AF=0.29353;AFR_AF=0.3396;AMR_AF=0.2709;AN=5008;CS=ALU_umary;EAS_AF=0.2183;EUR_AF=0.3668;MEINFO=AluUndef,1,271,+;NS=2504;SAS_AF=0.2495;SITEPOST=1;SVLEN=270;SVTYPE=ALU;TSD=AGAAATGAGTTTTATA	GT	1|1
13	90550575	ALU_umary_ALU_10014	G	<INS:ME:ALU>	.	.	AC=1918;AF=0.382987;AFR_AF=0.3374;AMR_AF=0.2911;AN=5008;CS=ALU_umary;EAS_AF=0.4831;EUR_AF=0.4205;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0.3681;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AACAGGAGACAGATG	GT	1|0
13	90726943	DEL_pindel_39197	GCTTGTATTGTAGGATGAATTCTTATTAAATTTTATCCTGGGAACACACTGCTCAT	G	.	PASS	AC=521;AF=0.104034;AFR_AF=0.2693;AMR_AF=0.0591;AN=5008;CS=DEL_pindel;EAS_AF=0.0109;END=90726998;EUR_AF=0.0825;NS=2504;SAS_AF=0.0307;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
13	90862850	UW_VH_1959	C	<CN0>	100	PASS	AC=2425;AF=0.484225;AFR_AF=0.3238;AMR_AF=0.4092;AN=5008;CIEND=0,503;CIPOS=-443,0;CS=DEL_union;EAS_AF=0.631;END=90864805;EUR_AF=0.4632;MC=UW_VH_11988,UW_VH_20803,YL_CN_JPT_3191,EM_DL_DEL10291895,YL_CN_KHV_3086,YL_CN_ASW_3051,UW_VH_20437,YL_CN_BEB_2547,SI_BD_13132,YL_CN_TSI_2983,BI_GS_DEL1_B1_P2184_642,YL_CN_CDX_2545,YL_CN_GBR_2945;NS=2504;SAS_AF=0.6247;SVTYPE=DEL	GT	1|1
13	90947642	ALU_umary_ALU_10018	G	<INS:ME:ALU>	.	.	AC=2771;AF=0.553315;AFR_AF=0.5567;AMR_AF=0.4841;AN=5008;CS=ALU_umary;EAS_AF=0.626;EUR_AF=0.4751;MEINFO=AluUndef,3,279,-;NS=2504;SAS_AF=0.6033;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=null	GT	1|0
13	91160038	DEL_pindel_39208	TAAAAGGGTTACTTTAAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	.	PASS	AC=3842;AF=0.767173;AFR_AF=0.7322;AMR_AF=0.7983;AN=5008;CS=DEL_pindel;EAS_AF=0.8026;END=91160287;EUR_AF=0.7594;MEINFO=AluY,69,281,+;NS=2504;SAS_AF=0.7638;SITEPOST=0.95725;SVTYPE=DEL_ALU	GT	1|1
13	92111709	DEL_pindel_39221	CTGGACATAGTAAGAAAAGAATTGAAGCCCAGGGCATCCTGATAATGGTAAAATATATCAGGGTTGCATCAGTGATGTAGGTGCCTGGAGGGTAGTGGATTAAAGAAGCCCAGGCTGTAGGA	C	.	PASS	AC=715;AF=0.142772;AFR_AF=0.1203;AMR_AF=0.0504;AN=5008;CS=DEL_pindel;EAS_AF=0.249;END=92111830;EUR_AF=0.0586;NS=2504;SAS_AF=0.2157;SITEPOST=0.995;SVTYPE=DEL	GT	0|1
13	92161674	ALU_umary_ALU_10024	T	<INS:ME:ALU>	.	.	AC=1974;AF=0.394169;AFR_AF=0.1021;AMR_AF=0.451;AN=5008;CS=ALU_umary;EAS_AF=0.5476;EUR_AF=0.5527;MEINFO=AluUndef,1,275,-;NS=2504;SAS_AF=0.4274;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AACATATTCATATTTT	GT	0|1
13	92261286	ALU_umary_ALU_10025	A	<INS:ME:ALU>	.	.	AC=2527;AF=0.504593;AFR_AF=0.3215;AMR_AF=0.5605;AN=5008;CS=ALU_umary;EAS_AF=0.6448;EUR_AF=0.5855;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.4847;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AATTTAGATTTGA	GT	1|1
13	92279248	DEL_pindel_39224	TGAACTCATCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTGCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3552;AF=0.709265;AFR_AF=0.7201;AMR_AF=0.7089;AN=5008;CS=DEL_pindel;EAS_AF=0.7679;END=92279583;EUR_AF=0.671;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6738;SITEPOST=0.9255;SVTYPE=DEL_ALU	GT	1|0
13	92513980	ALU_umary_ALU_10026	A	<INS:ME:ALU>	.	.	AC=1504;AF=0.300319;AFR_AF=0.0825;AMR_AF=0.2233;AN=5008;CS=ALU_umary;EAS_AF=0.4504;EUR_AF=0.3121;MEINFO=AluYa5,22,281,-;NS=2504;SAS_AF=0.4826;SITEPOST=1;SVLEN=259;SVTYPE=ALU;TSD=AAATAAAACATGTTGCTA	GT	1|0
13	93828421	ALU_umary_ALU_10036	T	<INS:ME:ALU>	.	.	AC=3204;AF=0.639776;AFR_AF=0.5915;AMR_AF=0.6455;AN=5008;CS=ALU_umary;EAS_AF=0.627;EUR_AF=0.6909;MEINFO=AluYa5,7,280,-;NS=2504;SAS_AF=0.6616;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=CATGCAGAAAAGGTTTTT	GT	0|1
13	94120730	ALU_umary_ALU_10040	A	<INS:ME:ALU>	.	.	AC=462;AF=0.0922524;AFR_AF=0.0938;AMR_AF=0.0663;AN=5008;CS=ALU_umary;EAS_AF=0.0427;EUR_AF=0.1501;MEINFO=AluUndef,5,281,+;NS=2504;SAS_AF=0.1002;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AATAAAGAAGCA	GT	1|0
13	97347834	DEL_pindel_39295	ATACCACCACCCTCAGCTGTTTTTTTTTTTTTTTTCTTTTACAGATGGAGTCTCACTATGATCCCCAGGCTGGTCTTGAACTCCTGGCC	A	.	PASS	AC=616;AF=0.123003;AFR_AF=0.152;AMR_AF=0.2061;AN=5008;CS=DEL_pindel;EAS_AF=0.1121;END=97347922;EUR_AF=0.0835;NS=2504;SAS_AF=0.0767;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
13	98721236	DEL_pindel_39320	CCCTTCTGCTTGATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	C	.	PASS	AC=2782;AF=0.555511;AFR_AF=0.4319;AMR_AF=0.5836;AN=5008;CS=DEL_pindel;EAS_AF=0.4355;END=98721556;EUR_AF=0.7137;MEINFO=AluYb6_2,3,281,-;NS=2504;SAS_AF=0.6636;SITEPOST=0.9869;SVTYPE=DEL_ALU	GT	1|0
13	98734914	ALU_umary_ALU_10058	T	<INS:ME:ALU>	.	.	AC=296;AF=0.0591054;AFR_AF=0.0393;AMR_AF=0.0576;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.1332;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0.0695;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GACAGTTTGCCATTAACCTT	GT	0|1
13	99254021	YL_CN_GIH_2351	C	<CN0>	100	PASS	AC=1244;AF=0.248403;AFR_AF=0.0998;AMR_AF=0.2075;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4038;END=99258251;EUR_AF=0.3012;MC=BI_GS_DEL1_B1_P2193_246,UW_VH_2415,EM_DL_DEL26305;NS=2504;SAS_AF=0.2638;SVTYPE=DEL	GT	0|1
13	100082627	ALU_umary_ALU_10064	T	<INS:ME:ALU>	.	.	AC=3053;AF=0.609625;AFR_AF=0.5885;AMR_AF=0.6182;AN=5008;CS=ALU_umary;EAS_AF=0.631;EUR_AF=0.6173;MEINFO=AluUndef,9,281,-;NS=2504;SAS_AF=0.6022;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=TATCCATCCATCTGTT	GT	1|1
13	101535973	ALU_umary_ALU_10068	T	<INS:ME:ALU>	.	.	AC=873;AF=0.174321;AFR_AF=0.1475;AMR_AF=0.2349;AN=5008;CS=ALU_umary;EAS_AF=0.1329;EUR_AF=0.2922;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.089;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GAGTTTATTCTT	GT	0|1
13	101625773	DEL_pindel_39375	ATATATATTATATATATAATATATAATACATATGTATTATATATACATATGTATATATATAATATATACATATATATAATATATATAATACATATGTAT	A	.	PASS	AC=2803;AF=0.559704;AFR_AF=0.5303;AMR_AF=0.5922;AN=5008;CS=DEL_pindel;EAS_AF=0.5863;END=101625871;EUR_AF=0.5457;NS=2504;SAS_AF=0.5634;SITEPOST=0.9765;SVTYPE=DEL	GT	0|1
13	101894135	UW_VH_13766	T	<CN0>	100	PASS	AC=2412;AF=0.481629;AFR_AF=0.4826;AMR_AF=0.4524;AN=5008;CIEND=0,546;CIPOS=-449,0;CS=DEL_union;EAS_AF=0.4077;END=101896428;EUR_AF=0.5288;MC=UW_VH_20831,UW_VH_6353,BI_GS_DEL1_B2_P2195_681,EM_DL_DEL26336,UW_VH_24667,UW_VH_5106,UW_VH_17320,YL_CN_CLM_2630,SI_BD_13196,UW_VH_2545,YL_CN_JPT_3199;NS=2504;SAS_AF=0.5286;SVTYPE=DEL	GT	0|1
13	103931643	DEL_pindel_39420	TAGAAAACCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2522;AF=0.503594;AFR_AF=0.6853;AMR_AF=0.513;AN=5008;CS=DEL_pindel;EAS_AF=0.4405;END=103931958;EUR_AF=0.4175;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4049;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	0|1
13	104009854	DEL_pindel_39424	TCAGTTTCTTTTATTTATTTATTTATTTATTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1824;AF=0.364217;AFR_AF=0.6505;AMR_AF=0.3055;AN=5008;CS=DEL_pindel;EAS_AF=0.2411;END=104010173;EUR_AF=0.2744;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.2382;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	0|1
13	104091776	SI_BD_13206	G	<CN0>	100	PASS	AC=4414;AF=0.88139;AFR_AF=0.8616;AMR_AF=0.9207;AN=5008;CIEND=-50,250;CIPOS=-250,50;CS=DEL_union;EAS_AF=0.8363;END=104092258;EUR_AF=0.8787;MC=DEL_pindel_39429,BI_GS_DEL1_B1_P2198_103,UW_VH_1027;NS=2504;SAS_AF=0.9294;SVTYPE=DEL	GT	1|1
13	104144377	DEL_pindel_39431	TCCATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTCAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGG	T	.	PASS	AC=3365;AF=0.671925;AFR_AF=0.5847;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.6905;END=104144660;EUR_AF=0.7247;MEINFO=AluY,47,281,-;NS=2504;SAS_AF=0.7045;SITEPOST=0.9316;SVTYPE=DEL_ALU	GT	0|1
13	105161209	DEL_pindel_39446	TAAAAGATCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3058;AF=0.610623;AFR_AF=0.5378;AMR_AF=0.6225;AN=5008;CS=DEL_pindel;EAS_AF=0.6458;END=105161523;EUR_AF=0.6272;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6472;SITEPOST=0.9831;SVTYPE=DEL_ALU	GT	0|1
13	106449327	BI_GS_DEL1_B3_P2200_14	T	<CN0>	100	PASS	AC=1647;AF=0.328874;AFR_AF=0.441;AMR_AF=0.3516;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1012;END=106449921;EUR_AF=0.332;MC=UW_VH_1874;NS=2504;SAS_AF=0.3926;SVTYPE=DEL	GT	1|0
13	107924538	DEL_pindel_39494	TTAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3038;AF=0.606629;AFR_AF=0.4705;AMR_AF=0.6354;AN=5008;CS=DEL_pindel;EAS_AF=0.6339;END=107924861;EUR_AF=0.666;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.681;SITEPOST=0.9926;SVTYPE=DEL_ALU	GT	1|0
13	108603779	DEL_pindel_39502	CTTACAAACCTTTAGCTAGACACAAGCGCTGATTGGTGCATTTTTACAGAGTGCTGATTGGCACAT	C	.	PASS	AC=990;AF=0.197684;AFR_AF=0.177;AMR_AF=0.2118;AN=5008;CS=DEL_pindel;EAS_AF=0.0774;END=108603844;EUR_AF=0.2972;NS=2504;SAS_AF=0.2372;SITEPOST=0.9961;SVTYPE=DEL	GT	1|0
13	108719818	ALU_umary_ALU_10097	T	<INS:ME:ALU>	.	.	AC=1105;AF=0.220647;AFR_AF=0.1732;AMR_AF=0.2248;AN=5008;CS=ALU_umary;EAS_AF=0.251;EUR_AF=0.2674;MEINFO=AluYb6_2,1,256,-;NS=2504;SAS_AF=0.2025;SITEPOST=1;SVLEN=255;SVTYPE=ALU;TSD=AATAATTTTT	GT	1|0
13	108947031	UW_VH_1876	G	<CN0>	100	PASS	AC=561;AF=0.112021;AFR_AF=0.2027;AMR_AF=0.0706;AN=5008;CIEND=0,364;CIPOS=-323,0;CS=DEL_union;EAS_AF=0.0208;END=108951803;EUR_AF=0.1571;MC=BI_GS_DEL1_B1_P2202_814,YL_CN_GIH_2357,EM_DL_DEL26420,SI_BD_13225;NS=2504;SAS_AF=0.0665;SVTYPE=DEL	GT	1|0
13	109361752	BI_GS_DEL1_B3_P2203_15	T	<CN0>	100	PASS	AC=1587;AF=0.316893;AFR_AF=0.3011;AMR_AF=0.304;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2718;END=109362442;EUR_AF=0.2922;MC=DEL_pindel_39514,SI_BD_13226;NS=2504;SAS_AF=0.4192;SVTYPE=DEL	GT	0|1
13	110812491	DEL_pindel_39549	TAAAAAAATTCATAGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	T	.	PASS	AC=696;AF=0.138978;AFR_AF=0.177;AMR_AF=0.1354;AN=5008;CS=DEL_pindel;EAS_AF=0.2381;END=110812806;EUR_AF=0.0736;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.0552;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	1|0
13	111076811	ALU_umary_ALU_10110	T	<INS:ME:ALU>	.	.	AC=2283;AF=0.455871;AFR_AF=0.3759;AMR_AF=0.4899;AN=5008;CS=ALU_umary;EAS_AF=0.5476;EUR_AF=0.4652;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4356;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AATAAGTTAATTCTTT	GT	0|1
13	111559414	DEL_pindel_39560	ACAGCAACACTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGAT	A	.	PASS	AC=4041;AF=0.806909;AFR_AF=0.7769;AMR_AF=0.83;AN=5008;CS=DEL_pindel;EAS_AF=0.8224;END=111559652;EUR_AF=0.8101;MEINFO=AluY,76,281,-;NS=2504;SAS_AF=0.8119;SITEPOST=0.9669;SVTYPE=DEL_ALU	GT	1|1
13	111703587	DEL_pindel_39564	ACCCACTCACACACATGCATGCATGCACACATAGACATATGCACTCACTCACACACATGCATGCATGTGCAAATGTATGCC	A	.	PASS	AC=1909;AF=0.38119;AFR_AF=0.3026;AMR_AF=0.4063;AN=5008;CS=DEL_pindel;EAS_AF=0.4345;END=111703667;EUR_AF=0.4056;NS=2504;SAS_AF=0.3896;SITEPOST=1;SVTYPE=DEL	GT	1|0
13	112993799	ALU_umary_ALU_10119	G	<INS:ME:ALU>	.	.	AC=1156;AF=0.230831;AFR_AF=0.0537;AMR_AF=0.2723;AN=5008;CS=ALU_umary;EAS_AF=0.3065;EUR_AF=0.3002;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.2914;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAGAAAAAATTATTGAACAG	GT	0|1
13	113520967	ALU_umary_ALU_10121	T	<INS:ME:ALU>	.	.	AC=2060;AF=0.411342;AFR_AF=0.357;AMR_AF=0.4409;AN=5008;CS=ALU_umary;EAS_AF=0.4534;EUR_AF=0.4364;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.3947;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TCTGGGTGACTTCT	GT	1|1
13	113616375	DEL_pindel_39609	ACATGCACACACAAACACGCTCACACCCAGGCATGCACACACACGCACGGACACGCACATG	A	.	PASS	AC=2074;AF=0.414137;AFR_AF=0.3797;AMR_AF=0.3818;AN=5008;CS=DEL_pindel;EAS_AF=0.3859;END=113616435;EUR_AF=0.4592;NS=2504;SAS_AF=0.4663;SITEPOST=0.9828;SVTYPE=DEL	GT	1|0
13	113991046	DEL_pindel_39632	GGTACCAACCATCCCTCCAGACAGCGGACGCACACAGGCCAAGTGCCCGCCTGGCGCTCAGCCCTAGAACT	G	.	PASS	AC=2881;AF=0.57528;AFR_AF=0.5424;AMR_AF=0.6225;AN=5008;CS=DEL_pindel;EAS_AF=0.5813;END=113991116;EUR_AF=0.5845;NS=2504;SAS_AF=0.5706;SITEPOST=0.9827;SVTYPE=DEL	GT	1|0
14	19112155	DUP_gs_CNV_14_19112155_19126473	T	<CN2>,<CN3>	.	PASS	AC=4986,4;AF=0.995607,0.00079872;AFR_AF=0.9924,0;AMR_AF=0.9957,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.999,0;END=19126473;EUR_AF=0.996,0.001;NS=2504;SAS_AF=0.9959,0.002;SITEPOST=1;SVTYPE=CNV	GT	1|1
14	19275560	YL_CN_CHS_3148	G	<CN0>	100	PASS	AC=1051;AF=0.209864;AFR_AF=0.2557;AMR_AF=0.1686;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.2778;END=19303201;EUR_AF=0.174;MC=SI_BD_13318;NS=2504;SAS_AF=0.1442;SVTYPE=DEL	GT	1|0
14	19286876	EM_DL_DEL26774	T	<CN0>	100	PASS	AC=1056;AF=0.210863;AFR_AF=0.2572;AMR_AF=0.1729;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.2778;END=19293367;EUR_AF=0.174;NS=2504;SAS_AF=0.1442;SVTYPE=DEL	GT	1|0
14	19290037	SI_BD_13319	T	<CN0>	100	PASS	AC=1053;AF=0.210264;AFR_AF=0.2564;AMR_AF=0.1686;AN=5008;CIEND=-50,226;CIPOS=-226,50;CS=DEL_union;EAS_AF=0.2768;END=19297660;EUR_AF=0.1759;NS=2504;SAS_AF=0.1442;SVTYPE=DEL	GT	1|0
14	20335553	DUP_gs_CNV_14_20335553_20423316	C	<CN2>,<CN3>,<CN4>	.	PASS	AC=1599,131,69;AF=0.319289,0.0261582,0.013778;AFR_AF=0.2874,0.0129,0.0045;AMR_AF=0.3069,0.0245,0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.3423,0.0238,0.0109;END=20423316;EUR_AF=0.3002,0.0338,0.0129;NS=2504;SAS_AF=0.3671,0.0399,0.0337;SITEPOST=1;SVTYPE=CNV	GT	1|0
14	21176134	SVA_umary_SVA_587	T	<INS:ME:SVA>	.	.	AC=1372;AF=0.273962;AFR_AF=0.1974;AMR_AF=0.3516;AN=5008;CS=SVA_umary;EAS_AF=0.1845;EUR_AF=0.4185;MEINFO=SVA,1087,1399,-;NS=2504;SAS_AF=0.2658;SITEPOST=1;SVLEN=312;SVTYPE=SVA;TSD=GCTAAAGGGATTTT	GT	0|1
14	21536131	DEL_pindel_39688	TGGCTCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2578;AF=0.514776;AFR_AF=0.3979;AMR_AF=0.6066;AN=5008;CS=DEL_pindel;EAS_AF=0.5833;END=21536457;EUR_AF=0.5775;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.4724;SITEPOST=0.96505;SVTYPE=DEL_ALU	GT	1|0
14	21778185	BI_GS_DEL1_B5_P2231_956	A	<CN0>	100	PASS	AC=2864;AF=0.571885;AFR_AF=0.5998;AMR_AF=0.5447;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5724;END=21778397;EUR_AF=0.505;MC=DEL_pindel_39700;NS=2504;SAS_AF=0.6217;SVTYPE=DEL	GT	0|1
14	21952624	UW_VH_11113	C	<CN0>	100	PASS	AC=2568;AF=0.51278;AFR_AF=0.4917;AMR_AF=0.379;AN=5008;CIEND=0,508;CIPOS=-417,0;CS=DEL_union;EAS_AF=0.6488;END=21954666;EUR_AF=0.502;MC=YL_CN_CDX_2617,UW_VH_9439,BI_GS_DEL1_B1_P2231_854,EM_DL_DEL26880,SI_BD_13336,UW_VH_1583;NS=2504;SAS_AF=0.5072;SVTYPE=DEL	GT	1|0
14	23922251	BI_GS_DEL1_B1_P2233_760	T	<CN0>	100	PASS	AC=3055;AF=0.610024;AFR_AF=0.3752;AMR_AF=0.6484;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6379;END=23922650;EUR_AF=0.7833;MC=UW_VH_1033,SI_BD_13350,DEL_pindel_39751;NS=2504;SAS_AF=0.6933;SVTYPE=DEL	GT	0|1
14	25262334	BI_GS_DEL1_B5_P2235_359	G	<CN0>	100	PASS	AC=550;AF=0.109824;AFR_AF=0.0953;AMR_AF=0.0922;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1498;END=25263126;EUR_AF=0.1044;MC=DEL_pindel_39799,SI_BD_13357,UW_VH_2954,UW_VH_16616;NS=2504;SAS_AF=0.1063;SVTYPE=DEL	GT	0|1
14	26147100	DEL_pindel_39811	TGAATTTAAGGTTTATTTATTTATTTTTTTTATTTTTTATTTTTTTTTTTAATTTATTTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCTCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	T	.	PASS	AC=583;AF=0.116414;AFR_AF=0.1853;AMR_AF=0.1138;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=26147457;EUR_AF=0.166;MEINFO=AluYa4b,1,281,-;NS=2504;SAS_AF=0.093;SITEPOST=0.99985;SVTYPE=DEL_ALU	GT	0|1
14	26283834	BI_GS_DEL1_B5_P2236_344	T	<CN0>	100	PASS	AC=415;AF=0.0828674;AFR_AF=0.0976;AMR_AF=0.0836;AN=5008;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0.001;END=26284791;EUR_AF=0.1491;MC=DEL_pindel_39814,UW_VH_1036,EM_DL_DEL10307208;NS=2504;SAS_AF=0.0787;SVTYPE=DEL	GT	0|1
14	29728038	DEL_pindel_39894	TGAGAATTCTTTTTTTTTTTTTTTGTTTTGCAACTAATATTGATTTCTTTTTTATTTTTATTTTTATTTTTATTTTTTTTTTAATTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGACATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGC	T	.	PASS	AC=2851;AF=0.569289;AFR_AF=0.5719;AMR_AF=0.487;AN=5008;CS=DEL_pindel;EAS_AF=0.6528;END=29728802;EUR_AF=0.5189;NS=2504;SAS_AF=0.59;SITEPOST=0.999;SVTYPE=DEL	GT	0|1
14	30854683	L1_umary_LINE1_2529	C	<INS:ME:LINE1>	.	.	AC=209;AF=0.0417332;AFR_AF=0.0265;AMR_AF=0.0317;AN=5008;CS=L1_umary;EAS_AF=0;EUR_AF=0.0825;MEINFO=LINE1,4631,6018,+;NS=2504;SAS_AF=0.0706;SITEPOST=1;SVLEN=1387;SVTYPE=LINE1;TSD=AAGATTACCAAATGAC	GT	1|0
14	31444309	ALU_umary_ALU_10183	C	<INS:ME:ALU>	.	.	AC=1757;AF=0.350839;AFR_AF=0.3275;AMR_AF=0.3804;AN=5008;CS=ALU_umary;EAS_AF=0.3075;EUR_AF=0.4602;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.2935;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAAAAGACAC	GT	1|0
14	32953270	SI_BD_13403	A	<CN0>	100	PASS	AC=3940;AF=0.786741;AFR_AF=0.8971;AMR_AF=0.7219;AN=5008;CIEND=-50,250;CIPOS=-250,94;CS=DEL_union;EAS_AF=0.87;END=32954364;EUR_AF=0.5656;MC=YL_CN_MXL_2595,EM_DL_DEL10309418,YL_CN_STU_3084,YL_CN_IBS_2793,YL_CN_ITU_3045,YL_CN_GIH_2417,YL_CN_PUR_3714,YL_CN_PEL_2816;NS=2504;SAS_AF=0.8252;SVTYPE=DEL	GT	0|1
14	33435780	DEL_pindel_39935	TAAGAACCCAAATTATGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCAGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1024;AF=0.204473;AFR_AF=0.3328;AMR_AF=0.1599;AN=5008;CS=DEL_pindel;EAS_AF=0.0149;END=33436003;EUR_AF=0.2465;MEINFO=AluY,101,281,+;NS=2504;SAS_AF=0.2147;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	0|1
14	34514028	BI_GS_DEL1_B2_P2244_373	C	<CN0>	100	PASS	AC=1342;AF=0.267971;AFR_AF=0.1944;AMR_AF=0.4179;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3522;END=34514838;EUR_AF=0.1879;MC=EM_DL_DEL10310178,UW_VH_1586;NS=2504;SAS_AF=0.2566;SVTYPE=DEL	GT	1|1
14	35401402	DEL_pindel_39981	TAAGAAATTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCACCTCTACTAAAAATACAAAAAATTAGCTGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCCAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2081;AF=0.415535;AFR_AF=0.3389;AMR_AF=0.4496;AN=5008;CS=DEL_pindel;EAS_AF=0.4077;END=35401723;EUR_AF=0.5139;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.4018;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	0|1
14	35428788	BI_GS_DEL1_B5_P2245_352	G	<CN0>	100	PASS	AC=205;AF=0.0409345;AFR_AF=0.0038;AMR_AF=0.0548;AN=5008;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0;END=35432438;EUR_AF=0.0905;MC=YL_CN_IBS_2797,UW_VH_1040,EM_DL_DEL27584,SI_BD_13416;NS=2504;SAS_AF=0.0726;SVTYPE=DEL	GT	0|1
14	36674760	L1_umary_LINE1_2536	A	<INS:ME:LINE1>	.	.	AC=1809;AF=0.361222;AFR_AF=0.2383;AMR_AF=0.3516;AN=5008;CS=L1_umary;EAS_AF=0.3452;EUR_AF=0.4821;MEINFO=LINE1,5830,6019,+;NS=2504;SAS_AF=0.4264;SITEPOST=1;SVLEN=189;SVTYPE=LINE1;TSD=AAGAATTTCCTGTTTA	GT	1|0
14	37999777	DUP_gs_CNV_14_37999777_38013670	A	<CN2>	.	PASS	AC=10;AF=0.00199681;AFR_AF=0;AMR_AF=0.0014;AN=5008;CS=DUP_gs;EAS_AF=0;END=38013670;EUR_AF=0.0089;NS=2504;SAS_AF=0;SITEPOST=1;SVTYPE=DUP	GT	1|0
14	38245235	DEL_pindel_40021	CTGGGTCTTGATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGATTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTCTTTTTAGTAGAGACGGGGTT	C	.	PASS	AC=2525;AF=0.504193;AFR_AF=0.4675;AMR_AF=0.5764;AN=5008;CS=DEL_pindel;EAS_AF=0.4762;END=38245451;EUR_AF=0.5298;MEINFO=AluY,104,281,-;NS=2504;SAS_AF=0.5051;SITEPOST=0.997;SVTYPE=DEL_ALU	GT	1|0
14	40312966	ALU_umary_ALU_10232	T	<INS:ME:ALU>	.	.	AC=2543;AF=0.507788;AFR_AF=0.472;AMR_AF=0.5159;AN=5008;CS=ALU_umary;EAS_AF=0.5913;EUR_AF=0.5596;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.411;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GATTCTTATCAACTCTTTT	GT	1|1
14	40882900	ALU_umary_ALU_10240	A	<INS:ME:ALU>	.	.	AC=1637;AF=0.326877;AFR_AF=0.1089;AMR_AF=0.3329;AN=5008;CS=ALU_umary;EAS_AF=0.5278;EUR_AF=0.325;MEINFO=AluYa4_2,2,281,-;NS=2504;SAS_AF=0.4121;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TCCTTTGTCCTCTA	GT	1|0
14	41122391	DEL_pindel_40057	GATCCTCCCACCTCAGCCTCTAGCGAAAACTACAGATGCACATGACCATATCTGTCTAATATACTTTATTTTTTAAAAATATATAGTGATGAGGTCT	G	.	PASS	AC=1466;AF=0.292732;AFR_AF=0.1868;AMR_AF=0.3141;AN=5008;CS=DEL_pindel;EAS_AF=0.3968;END=41122487;EUR_AF=0.1799;NS=2504;SAS_AF=0.4294;SITEPOST=0.9994;SVTYPE=DEL	GT	0|1
14	41602366	DEL_pindel_40067	ATATTTTCTCAAATATATACGTATATATTTTCTCAAATATATACGTATATAT	A	.	PASS	AC=1286;AF=0.256789;AFR_AF=0.0643;AMR_AF=0.1715;AN=5008;CS=DEL_pindel;EAS_AF=0.3998;END=41602417;EUR_AF=0.3181;NS=2504;SAS_AF=0.3671;SITEPOST=0.988;SVTYPE=DEL	GT	1|1
14	43899449	DEL_pindel_40110	ATTCTCAAATAACAAAATGATATACAATCTATTCATATGCTAGCCCAATTAACTTTGGCTAATGAGAATAAAGAACCAAAAGTG	A	.	PASS	AC=3195;AF=0.637979;AFR_AF=0.5726;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.6796;END=43899532;EUR_AF=0.6511;NS=2504;SAS_AF=0.6493;SITEPOST=0.95005;SVTYPE=DEL	GT	1|0
14	45014099	ALU_umary_ALU_10265	A	<INS:ME:ALU>	.	.	AC=2059;AF=0.411142;AFR_AF=0.3782;AMR_AF=0.4006;AN=5008;CS=ALU_umary;EAS_AF=0.4345;EUR_AF=0.4195;MEINFO=AluYa5,1,277,-;NS=2504;SAS_AF=0.4305;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=CTCA	GT	0|1
14	46577923	DEL_pindel_40143	TAAAAGCCTCCAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3384;AF=0.675719;AFR_AF=0.7254;AMR_AF=0.7925;AN=5008;CS=DEL_pindel;EAS_AF=0.503;END=46578243;EUR_AF=0.7416;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.636;SITEPOST=0.9818;SVTYPE=DEL_ALU	GT	1|1
14	48334241	DEL_pindel_40196	TAAAAAACATTTTGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGAGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2923;AF=0.583666;AFR_AF=0.4652;AMR_AF=0.6571;AN=5008;CS=DEL_pindel;EAS_AF=0.504;END=48334556;EUR_AF=0.672;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.683;SITEPOST=0.9924;SVTYPE=DEL_ALU	GT	0|1
14	50118870	DEL_pindel_40234	TAAGAATAGAATACGGAGAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2334;AF=0.466054;AFR_AF=0.531;AMR_AF=0.5346;AN=5008;CS=DEL_pindel;EAS_AF=0.2421;END=50119027;EUR_AF=0.5765;MEINFO=AluYc,188,282,+;NS=2504;SAS_AF=0.4468;SITEPOST=0.9981;SVTYPE=DEL_ALU	GT	1|0
14	51408908	BI_GS_DEL1_B4_P2261_87	A	<CN0>	100	PASS	AC=1394;AF=0.278355;AFR_AF=0.0719;AMR_AF=0.3948;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4454;END=51409542;EUR_AF=0.2406;MC=SI_BD_13518;NS=2504;SAS_AF=0.3415;SVTYPE=DEL	GT	1|0
14	51432094	ALU_umary_ALU_10299	T	<INS:ME:ALU>	.	.	AC=1958;AF=0.390974;AFR_AF=0.1286;AMR_AF=0.4539;AN=5008;CS=ALU_umary;EAS_AF=0.5258;EUR_AF=0.4821;MEINFO=AluYb11,1,263,-;NS=2504;SAS_AF=0.4683;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=CTGGAATTAAATCTT	GT	1|0
14	51719000	ALU_umary_ALU_10302	C	<INS:ME:ALU>	.	.	AC=1800;AF=0.359425;AFR_AF=0.2912;AMR_AF=0.4006;AN=5008;CS=ALU_umary;EAS_AF=0.3552;EUR_AF=0.4095;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.3753;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAGAAATCTTTCC	GT	1|0
14	52594665	DEL_pindel_40272	CAAAAAAGGCAAATGCCGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAAGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=419;AF=0.0836661;AFR_AF=0.0741;AMR_AF=0.0807;AN=5008;CS=DEL_pindel;EAS_AF=0.1121;END=52594980;EUR_AF=0.0974;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0552;SITEPOST=1;SVTYPE=DEL_ALU	GT	0|1
14	54564051	DEL_pindel_40316	CAAAACAACAGTAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAAAAAA	C	.	PASS	AC=3373;AF=0.673522;AFR_AF=0.5166;AMR_AF=0.6715;AN=5008;CS=DEL_pindel;EAS_AF=0.7609;END=54564385;EUR_AF=0.7326;MEINFO=AluYc2,1,281,+;NS=2504;SAS_AF=0.7362;SITEPOST=0.9815;SVTYPE=DEL_ALU	GT	1|1
14	54710363	UW_VH_1048	C	<CN0>	100	PASS	AC=680;AF=0.135783;AFR_AF=0.0136;AMR_AF=0.2205;AN=5008;CIEND=0,400;CIPOS=-479,0;CS=DEL_union;EAS_AF=0.0397;END=54713688;EUR_AF=0.2853;MC=YL_CN_CLM_2722,BI_GS_DEL1_B2_P2264_550,EM_DL_DEL28168;NS=2504;SAS_AF=0.1861;SVTYPE=DEL	GT	0|1
14	54815743	ALU_umary_ALU_10321	T	<INS:ME:ALU>	.	.	AC=1323;AF=0.264177;AFR_AF=0.1581;AMR_AF=0.3401;AN=5008;CS=ALU_umary;EAS_AF=0.1905;EUR_AF=0.4294;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0.2597;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=TGTCCCAAATATTCTT	GT	1|0
14	55795871	ALU_umary_ALU_10325	T	<INS:ME:ALU>	.	.	AC=1144;AF=0.228435;AFR_AF=0.171;AMR_AF=0.1758;AN=5008;CS=ALU_umary;EAS_AF=0.2698;EUR_AF=0.2783;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2495;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TAAAACGTGGTTTATTTCT	GT	1|0
14	59883503	BI_GS_DEL1_B3_P2269_45	C	<CN0>	100	PASS	AC=2157;AF=0.430711;AFR_AF=0.056;AMR_AF=0.389;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8472;END=59884059;EUR_AF=0.4682;NS=2504;SAS_AF=0.499;SVTYPE=DEL	GT	0|1
14	60454171	ALU_umary_ALU_10348	T	<INS:ME:ALU>	.	.	AC=2272;AF=0.453674;AFR_AF=0.2943;AMR_AF=0.5317;AN=5008;CS=ALU_umary;EAS_AF=0.4841;EUR_AF=0.6133;MEINFO=AluYb7_4,1,280,-;NS=2504;SAS_AF=0.4182;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CAACCTTAACTTCTTT	GT	0|1
14	60575499	ALU_umary_ALU_10350	T	<INS:ME:ALU>	.	.	AC=2035;AF=0.40635;AFR_AF=0.2602;AMR_AF=0.4841;AN=5008;CS=ALU_umary;EAS_AF=0.4365;EUR_AF=0.5268;MEINFO=AluYa5c1,1,281,-;NS=2504;SAS_AF=0.3937;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=ATATTGATTTTTT	GT	1|1
14	63226292	ALU_umary_ALU_10360	T	<INS:ME:ALU>	.	.	AC=1499;AF=0.299321;AFR_AF=0.1006;AMR_AF=0.3199;AN=5008;CS=ALU_umary;EAS_AF=0.3294;EUR_AF=0.339;MEINFO=AluUndef,10,250,-;NS=2504;SAS_AF=0.4816;SITEPOST=1;SVLEN=240;SVTYPE=ALU;TSD=AGGGTATAT	GT	1|0
14	63787170	DEL_pindel_40512	ACGACAATTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACAGTGAAACCCCGTCTCTACTAAAACTACAAAAAATAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAACAAAAAAAAAAAAACAAAAAAAAAAC	A	.	PASS	AC=1129;AF=0.225439;AFR_AF=0.3835;AMR_AF=0.1254;AN=5008;CS=DEL_pindel;EAS_AF=0.2431;END=63787502;EUR_AF=0.2197;MEINFO=AluYa8,1,281,+;NS=2504;SAS_AF=0.0706;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|1
14	65015043	ALU_umary_ALU_10368	T	<INS:ME:ALU>	.	.	AC=1610;AF=0.321486;AFR_AF=0.1914;AMR_AF=0.3314;AN=5008;CS=ALU_umary;EAS_AF=0.4315;EUR_AF=0.3519;MEINFO=AluYb8,8,280,-;NS=2504;SAS_AF=0.3456;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=GAGTTTCT	GT	0|1
14	65606353	UW_VH_22798	T	<CN0>	100	PASS	AC=1289;AF=0.257388;AFR_AF=0.2337;AMR_AF=0.1744;AN=5008;CIEND=0,213;CIPOS=-211,0;CS=DEL_union;EAS_AF=0.2024;END=65608023;EUR_AF=0.333;MC=BI_GS_DEL1_B2_P2275_501,UW_VH_2161,EM_DL_DEL10321714,UW_VH_10871,UW_VH_13312,YL_CN_JPT_3301;NS=2504;SAS_AF=0.3272;SVTYPE=DEL	GT	0|1
14	68603032	BI_GS_DEL1_B5_P2278_718	C	<CN0>	100	PASS	AC=3433;AF=0.685503;AFR_AF=0.3192;AMR_AF=0.7911;AN=5008;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.879;END=68603740;EUR_AF=0.7952;MC=UW_VH_6471,SI_BD_13603,UW_VH_1054;NS=2504;SAS_AF=0.7935;SVTYPE=DEL	GT	1|1
14	68995379	DEL_pindel_40625	TAATTATTTACCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAG	T	.	PASS	AC=4093;AF=0.817292;AFR_AF=0.7897;AMR_AF=0.8242;AN=5008;CS=DEL_pindel;EAS_AF=0.8204;END=68995453;EUR_AF=0.84;MEINFO=AluYb8,242,282,-;NS=2504;SAS_AF=0.8231;SITEPOST=0.9707;SVTYPE=DEL_ALU	GT	1|1
14	70687829	BI_GS_DEL1_B5_P2280_931	C	<CN0>	100	PASS	AC=166;AF=0.033147;AFR_AF=0.0045;AMR_AF=0.0389;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=70689462;EUR_AF=0.1083;MC=SI_BD_13609,UW_VH_2480,EM_DL_DEL10323909;NS=2504;SAS_AF=0.0245;SVTYPE=DEL	GT	1|0
14	71320960	DEL_pindel_40675	TCACCCTGAATTATTTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGTTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG	T	.	PASS	AC=3191;AF=0.637181;AFR_AF=0.6346;AMR_AF=0.6859;AN=5008;CS=DEL_pindel;EAS_AF=0.5764;END=71321253;EUR_AF=0.664;MEINFO=AluY,22,281,-;NS=2504;SAS_AF=0.6411;SITEPOST=0.982;SVTYPE=DEL_ALU	GT	1|1
14	76813775	BI_GS_DEL1_B4_P2286_204	T	<CN0>	100	PASS	AC=2954;AF=0.589856;AFR_AF=0.5295;AMR_AF=0.6888;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5903;END=76814213;EUR_AF=0.5398;NS=2504;SAS_AF=0.6524;SVTYPE=DEL	GT	1|1
14	77193681	DEL_pindel_40805	TGCCTAGCCTCTGTGCTAGCCTCTAAGTGCTTTTTAATACACTAATTAATAATTATAAC	T	.	PASS	AC=2039;AF=0.407149;AFR_AF=0.407;AMR_AF=0.3934;AN=5008;CS=DEL_pindel;EAS_AF=0.4018;END=77193739;EUR_AF=0.4026;NS=2504;SAS_AF=0.4274;SITEPOST=0.9987;SVTYPE=DEL	GT	0|1
14	78249852	DEL_pindel_40818	TAAAAATTTAGTGATTATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGGCAACAGGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGGGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3738;AF=0.746406;AFR_AF=0.7073;AMR_AF=0.7709;AN=5008;CS=DEL_pindel;EAS_AF=0.6806;END=78250190;EUR_AF=0.7396;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.8569;SITEPOST=0.9955;SVTYPE=DEL_ALU	GT	1|1
14	78982709	ALU_umary_ALU_10421	G	<INS:ME:ALU>	.	.	AC=1448;AF=0.289137;AFR_AF=0.1959;AMR_AF=0.3386;AN=5008;CS=ALU_umary;EAS_AF=0.3492;EUR_AF=0.2942;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0.3129;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AGAATAGAAAAGAAGG	GT	0|1
14	79653926	DEL_pindel_40846	TAAAAATGTGTAAGCATGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4141;AF=0.826877;AFR_AF=0.7844;AMR_AF=0.8401;AN=5008;CS=DEL_pindel;EAS_AF=0.8631;END=79654025;EUR_AF=0.829;MEINFO=AluY,216,281,+;NS=2504;SAS_AF=0.8354;SITEPOST=0.9805;SVTYPE=DEL_ALU	GT	1|1
14	80106272	UW_VH_1059	A	<CN0>	100	PASS	AC=831;AF=0.165935;AFR_AF=0.0166;AMR_AF=0.353;AN=5008;CIEND=0,422;CIPOS=-393,0;CS=DEL_union;EAS_AF=0.0476;END=80115058;EUR_AF=0.34;MC=UW_VH_4748,YL_CN_PUR_3758,EM_DL_DEL28860,BI_GS_DEL1_B2_P2290_97,UW_VH_5813;NS=2504;SAS_AF=0.1779;SVTYPE=DEL	GT	1|0
14	81786791	SVA_umary_SVA_613	T	<INS:ME:SVA>	.	.	AC=1794;AF=0.358227;AFR_AF=0.329;AMR_AF=0.3588;AN=5008;CS=SVA_umary;EAS_AF=0.3383;EUR_AF=0.4384;MEINFO=SVA,82,1618,-;NS=2504;SAS_AF=0.3354;SITEPOST=1;SVLEN=1536;SVTYPE=SVA;TSD=ACCATTTTTATAATTAAT	GT	0|1
14	82499115	UW_VH_13935	C	<CN0>	100	PASS	AC=2422;AF=0.483626;AFR_AF=0.2753;AMR_AF=0.6095;AN=5008;CIEND=0,441;CIPOS=-387,0;CS=DEL_union;EAS_AF=0.6081;END=82503327;EUR_AF=0.5994;MC=UW_VH_20804,UW_VH_1960,UW_VH_14438,UW_VH_10825,UW_VH_14455,UW_VH_20548,UW_VH_5353,YL_CN_GBR_3075,UW_VH_18025,EM_DL_DEL28947,UW_VH_17985;NS=2504;SAS_AF=0.4284;SVTYPE=DEL	GT	0|1
14	83019601	DEL_pindel_40934	AAGTAATCAACTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTG	A	.	PASS	AC=3041;AF=0.607228;AFR_AF=0.5272;AMR_AF=0.5548;AN=5008;CS=DEL_pindel;EAS_AF=0.6746;END=83019882;EUR_AF=0.6312;MEINFO=AluY,35,281,-;NS=2504;SAS_AF=0.6585;SITEPOST=0.9872;SVTYPE=DEL_ALU	GT	1|0
14	83386736	DEL_pindel_40948	ACGTCATTACTTTCTAATGTTTAAAATAACTCAAAACAAAATTGAAAATGATTAACCTGAAGAAGAGATGAATGTCTTTAAAGATTATACTGAGGAATTTCTAGTGAATGAAACATGAAATAAGGAGATGAAAAACTTTAAAAAAAACGTTAAGCAGTATGGGC	A	.	PASS	AC=212;AF=0.0423323;AFR_AF=0.0363;AMR_AF=0.0331;AN=5008;CS=DEL_pindel;EAS_AF=0.0377;END=83386899;EUR_AF=0.0626;NS=2504;SAS_AF=0.0409;SITEPOST=0.9988;SVTYPE=DEL	GT	0|1
14	83435132	UW_VH_2418	C	<CN0>	100	PASS	AC=407;AF=0.08127;AFR_AF=0.0121;AMR_AF=0.0692;AN=5008;CIEND=0,271;CIPOS=-295,0;CS=DEL_union;EAS_AF=0.1002;END=83437109;EUR_AF=0.1292;MC=BI_GS_DEL1_B5_P2293_494,YL_CN_BEB_2645;NS=2504;SAS_AF=0.1145;SVTYPE=DEL	GT	1|0
14	83852035	BI_GS_DEL1_B5_P2293_928	T	<CN0>	100	PASS	AC=1940;AF=0.38738;AFR_AF=0.1634;AMR_AF=0.3314;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6161;END=83852358;EUR_AF=0.3231;MC=UW_VH_2764;NS=2504;SAS_AF=0.5603;SVTYPE=DEL	GT	1|0
14	85139129	BI_GS_DEL1_B5_P2295_155	T	<CN0>	100	PASS	AC=1599;AF=0.319289;AFR_AF=0.32;AMR_AF=0.353;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.3323;END=85139627;EUR_AF=0.2386;NS=2504;SAS_AF=0.364;SVTYPE=DEL	GT	0|1
14	87858056	DEL_pindel_41052	TAAAATCGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGAGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAATAAAAAAATAAAAAAAAAAAAAAAA	T	.	PASS	AC=4764;AF=0.951278;AFR_AF=0.913;AMR_AF=0.9582;AN=5008;CS=DEL_pindel;EAS_AF=0.9653;END=87858383;EUR_AF=0.9622;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.9724;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|1
14	92125068	ALU_umary_ALU_10493	A	<INS:ME:ALU>	.	.	AC=2919;AF=0.582867;AFR_AF=0.5144;AMR_AF=0.5735;AN=5008;CS=ALU_umary;EAS_AF=0.626;EUR_AF=0.5676;MEINFO=AluUndef,4,280,+;NS=2504;SAS_AF=0.6534;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAAAAAAGGAAGGGA	GT	1|0
14	93336487	SI_BD_13751	A	<CN0>	100	PASS	AC=679;AF=0.135583;AFR_AF=0.031;AMR_AF=0.1844;AN=5008;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.1954;END=93338122;EUR_AF=0.1223;NS=2504;SAS_AF=0.1943;SVTYPE=DEL	GT	0|1
14	94235337	DEL_pindel_41153	GCCAGTGATTACAGGTGTGCACCAACACAACTGGCTAAAGATCACTTTTTTAAAAGT	G	.	PASS	AC=2818;AF=0.5627;AFR_AF=0.5363;AMR_AF=0.6758;AN=5008;CS=DEL_pindel;EAS_AF=0.4534;END=94235393;EUR_AF=0.6302;NS=2504;SAS_AF=0.5613;SITEPOST=0.9721;SVTYPE=DEL	GT	0|1
14	98494393	ALU_umary_ALU_10518	T	<INS:ME:ALU>	.	.	AC=1723;AF=0.34405;AFR_AF=0.202;AMR_AF=0.4625;AN=5008;CS=ALU_umary;EAS_AF=0.2282;EUR_AF=0.5547;MEINFO=AluYb7_2,2,279,-;NS=2504;SAS_AF=0.3548;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=CCAACTCAAAGACAGTT	GT	1|0
14	98783966	BI_GS_DEL1_B4_P2308_182	A	<CN0>	100	PASS	AC=1537;AF=0.306909;AFR_AF=0.3185;AMR_AF=0.2853;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.3304;END=98785085;EUR_AF=0.4314;MC=SI_BD_13774;NS=2504;SAS_AF=0.1544;SVTYPE=DEL	GT	1|0
14	100844997	DEL_pindel_41322	GAAGAATGTTCCAGGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	.	PASS	AC=2385;AF=0.476238;AFR_AF=0.3797;AMR_AF=0.3963;AN=5008;CS=DEL_pindel;EAS_AF=0.4157;END=100845330;EUR_AF=0.5616;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.638;SITEPOST=0.9943;SVTYPE=DEL_ALU	GT	1|1
14	105417023	YL_CN_ITU_3106	C	<CN0>	100	PASS	AC=1454;AF=0.290335;AFR_AF=0.1135;AMR_AF=0.3775;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0883;END=105418385;EUR_AF=0.5368;NS=2504;SAS_AF=0.4223;SVTYPE=DEL	GT	0|1
15	20393078	DUP_gs_CNV_15_20393078_20419533	A	<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=1058,2487,72,43;AF=0.211262,0.496605,0.014377,0.00858626;AFR_AF=0.233,0.438,0.0212,0.0083;AMR_AF=0.1888,0.4697,0.0086,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.2153,0.5913,0.0169,0.0139;END=20419533;EUR_AF=0.2078,0.5089,0.004,0.003;NS=2504;SAS_AF=0.1973,0.4847,0.0174,0.0143;SITEPOST=0.969;SVTYPE=CNV	GT	0|2
15	20598942	DUP_gs_CNV_15_20598942_20625797	A	<CN2>,<CN3>,<CN4>,<CN5>,<CN6>,<CN7>,<CN8>,<CN9>	.	PASS	AC=388,1423,854,627,235,62,18,28;AF=0.077476,0.284145,0.170527,0.1252,0.0469249,0.0123802,0.00359425,0.00559105;AFR_AF=0.0658,0.23,0.1944,0.1362,0.0703,0.0053,0.0053,0.0098;AMR_AF=0.1066,0.353,0.1095,0.062,0.0346,0.0058,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.0536,0.249,0.1954,0.1806,0.0228,0.0327,0.003,0.0069;END=20625797;EUR_AF=0.0865,0.2982,0.1869,0.1103,0.0338,0.007,0.002,0.003;NS=2504;SAS_AF=0.0879,0.3303,0.1391,0.1135,0.0624,0.0112,0.0061,0.0051;SITEPOST=0.8692;SVTYPE=CNV	GT	2|0
15	20846721	DUP_gs_CNV_15_20846721_20867075	A	<CN2>,<CN3>,<CN4>,<CN5>,<CN6>,<CN7>	.	PASS	AC=777,1952,506,486,109,45;AF=0.155152,0.389776,0.101038,0.0970447,0.0217652,0.00898562;AFR_AF=0.1846,0.3759,0.1067,0.0756,0.0076,0.0053;AMR_AF=0.1772,0.3977,0.0865,0.0533,0.0058,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.123,0.4157,0.0764,0.1181,0.0635,0.0198;END=20867075;EUR_AF=0.1322,0.3966,0.1332,0.0835,0.0159,0.005;NS=2504;SAS_AF=0.1564,0.3691,0.0961,0.1493,0.0153,0.0123;SITEPOST=0.89685;SVTYPE=CNV	GT	2|0
15	21902635	DUP_gs_CNV_15_21902635_21929978	T	<CN2>,<CN3>,<CN4>,<CN5>,<CN6>,<CN7>	.	PASS	AC=587,1697,775,569,22,41;AF=0.117212,0.338858,0.154752,0.113618,0.00439297,0.0081869;AFR_AF=0.1649,0.3011,0.149,0.0855,0.003,0.0068;AMR_AF=0.1427,0.3833,0.0994,0.062,0.0014,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.0456,0.3065,0.2183,0.1637,0.0089,0.0139;END=21929978;EUR_AF=0.1203,0.3847,0.1441,0.0924,0.006,0.006;NS=2504;SAS_AF=0.1053,0.3446,0.1472,0.1585,0.002,0.0102;SITEPOST=0.926;SVTYPE=CNV	GT	2|0
15	22336904	DUP_gs_CNV_15_22336904_22343964	T	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=1206,1755,113,93,58;AF=0.240815,0.350439,0.0225639,0.0185703,0.0115815;AFR_AF=0.0673,0.3964,0.0787,0.0356,0.0166;AMR_AF=0.4726,0.232,0.0029,0.0072,0;AN=5008;CS=DUP_gs;EAS_AF=0.2242,0.374,0.005,0.0218,0.0129;END=22343964;EUR_AF=0.2913,0.3549,0.001,0.008,0.0089;NS=2504;SAS_AF=0.2761,0.3436,0.001,0.0112,0.0143;SITEPOST=0.98205;SVTYPE=CNV	GT	1|0
15	22372936	DUP_gs_CNV_15_22372936_22383193	A	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>,<CN6>	.	PASS	AC=354,1775,149,95,18,9;AF=0.0706869,0.354433,0.0297524,0.0189696,0.00359425,0.00179712;AFR_AF=0.0787,0.3828,0.0439,0.0272,0.0045,0.0023;AMR_AF=0.1326,0.2709,0.0115,0.0086,0.0029,0;AN=5008;CS=DUP_gs;EAS_AF=0.0198,0.3849,0.0308,0.0308,0.0069,0.002;END=22383193;EUR_AF=0.0855,0.3499,0.0149,0.0099,0,0;NS=2504;SAS_AF=0.0532,0.3487,0.0378,0.0123,0.0031,0.0041;SITEPOST=0.99125;SVTYPE=CNV	GT	0|1
15	23671395	YL_CN_STU_3234	A	<CN0>	100	PASS	AC=4899;AF=0.978235;AFR_AF=0.9198;AMR_AF=0.9971;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.999;END=23674750;EUR_AF=1;MC=YL_CN_PUR_3897;NS=2504;SAS_AF=1;SVTYPE=DEL	GT	1|1
15	24207057	DEL_pindel_41554	TAAAATTACTCCGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGACGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2257;AF=0.450679;AFR_AF=0.534;AMR_AF=0.3703;AN=5008;CS=DEL_pindel;EAS_AF=0.3948;END=24207366;EUR_AF=0.4692;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4335;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	1|1
15	24350936	DUP_gs_CNV_15_24350936_24389975	G	<CN0>,<CN2>	.	PASS	AC=16,4;AF=0.00319489,0.00079872;AFR_AF=0.0008,0.0008;AMR_AF=0.0072,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.001;END=24389975;EUR_AF=0.008,0.001;NS=2504;SAS_AF=0.002,0.001;SITEPOST=1;SVTYPE=CNV	GT	0|1
15	24354619	YL_CN_MXL_2735	A	<CN0>	100	PASS	AC=17;AF=0.00339457;AFR_AF=0.0008;AMR_AF=0.0072;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=24507954;EUR_AF=0.0089;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	0|1
15	24377380	DUP_gs_CNV_15_24377380_24438730	T	<CN0>,<CN2>	.	PASS	AC=33,21;AF=0.00658946,0.00419329;AFR_AF=0.0008,0.0008;AMR_AF=0.0187,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.001;END=24438730;EUR_AF=0.0159,0.008;NS=2504;SAS_AF=0.002,0.0112;SITEPOST=1;SVTYPE=CNV	GT	1|0
15	24384356	YL_CN_CLM_2842	A	<CN0>	100	PASS	AC=34;AF=0.00678914;AFR_AF=0.0008;AMR_AF=0.0187;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.001;END=24440422;EUR_AF=0.0169;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	1|0
15	24409775	YL_CN_BEB_2748	A	<CN0>	100	PASS	AC=33;AF=0.00658946;AFR_AF=0.0008;AMR_AF=0.0086;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=24485111;EUR_AF=0.0089;MC=EM_DL_DEL31772;NS=2504;SAS_AF=0.0174;SVTYPE=DEL	GT	1|0
15	24450166	DUP_gs_CNV_15_24450166_24484075	T	<CN0>,<CN2>	.	PASS	AC=42,13;AF=0.00838658,0.00259585;AFR_AF=0.0038,0.0053;AMR_AF=0.0086,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.001;END=24484075;EUR_AF=0.008,0.001;NS=2504;SAS_AF=0.0235,0.0041;SITEPOST=1;SVTYPE=CNV	GT	1|0
15	24495296	DUP_gs_CNV_15_24495296_24502596	A	<CN0>,<CN2>	.	PASS	AC=27,11;AF=0.00539137,0.00219649;AFR_AF=0.0038,0.0053;AMR_AF=0.0086,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0,0;END=24502596;EUR_AF=0.008,0.001;NS=2504;SAS_AF=0.0082,0.002;SITEPOST=1;SVTYPE=CNV	GT	1|0
15	24839317	DEL_pindel_41563	GCCCTGGTGAACTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGC	G	.	PASS	AC=1187;AF=0.237021;AFR_AF=0.3283;AMR_AF=0.1902;AN=5008;CS=DEL_pindel;EAS_AF=0.1677;END=24839639;EUR_AF=0.2694;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.1851;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|0
15	25116952	UW_VH_1069	C	<CN0>	100	PASS	AC=2119;AF=0.423123;AFR_AF=0.2897;AMR_AF=0.4712;AN=5008;CIEND=0,509;CIPOS=-439,0;CS=DEL_union;EAS_AF=0.5437;END=25118666;EUR_AF=0.4215;MC=YL_CN_GBR_3210,YL_CN_STU_3247,BI_GS_DEL1_B1_P2343_101,YL_CN_JPT_3431,YL_CN_YRI_4123,YL_CN_ESN_3317,YL_CN_ASW_3313,UW_VH_4003,YL_CN_ITU_3208,YL_CN_TSI_3260,UW_VH_4324;NS=2504;SAS_AF=0.4468;SVTYPE=DEL	GT	0|1
15	28175804	L1_umary_LINE1_2628	T	<INS:ME:LINE1>	.	.	AC=1196;AF=0.238818;AFR_AF=0.0068;AMR_AF=0.2882;AN=5008;CS=L1_umary;EAS_AF=0.5417;EUR_AF=0.1958;MEINFO=LINE1,5658,6019,-;NS=2504;SAS_AF=0.2495;SITEPOST=1;SVLEN=361;SVTYPE=LINE1;TSD=GCTTGCCAACTCTT	GT	0|1
15	28701268	DUP_gs_CNV_15_28701268_28709132	C	<CN2>,<CN3>,<CN4>,<CN5>,<CN6>	.	PASS	AC=4484,145,21,6,5;AF=0.895367,0.0289537,0.00419329,0.00119808,0.0009984;AFR_AF=0.8941,0.0424,0.0091,0.0015,0;AMR_AF=0.853,0.0375,0.0058,0.0014,0.0058;AN=5008;CS=DUP_gs;EAS_AF=0.9375,0.0119,0.001,0.001,0;END=28709132;EUR_AF=0.8757,0.0139,0.002,0,0;NS=2504;SAS_AF=0.9039,0.0378,0.002,0.002,0.001;SITEPOST=0.999;SVTYPE=CNV	GT	1|1
15	29411474	DEL_pindel_41644	TAAGAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAATTAAAAATAAATAAATAAATAAATAAAATAAAATAAAATAATAAAATAATTCACAATTCTAGCAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3332;AF=0.665335;AFR_AF=0.4879;AMR_AF=0.7277;AN=5008;CS=DEL_pindel;EAS_AF=0.6786;END=29411896;EUR_AF=0.7684;MEINFO=LINE1,5207,5232,+;NS=2504;SAS_AF=0.7413;SITEPOST=0.9965;SVTYPE=DEL_LINE1	GT	1|1
15	32291220	DEL_pindel_41710	TCAGCTCGTGGTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2517;AF=0.502596;AFR_AF=0.3238;AMR_AF=0.5677;AN=5008;CS=DEL_pindel;EAS_AF=0.6548;END=32291528;EUR_AF=0.4751;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.5695;SITEPOST=0.9944;SVTYPE=DEL_ALU	GT	1|0
15	34741739	DEL_pindel_41757	CAAAAATGGAAGCTGAGGGAGGCCGAGGCGGGCGAATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTGATGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGTTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCCGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2143;AF=0.427915;AFR_AF=0.4713;AMR_AF=0.4986;AN=5008;CS=DEL_pindel;EAS_AF=0.3938;END=34742019;EUR_AF=0.3588;MEINFO=AluYi,37,281,+;NS=2504;SAS_AF=0.4254;SITEPOST=0.9938;SVTYPE=DEL_ALU	GT	0|1
15	35009016	DEL_pindel_41766	ACCAAGCAGTGGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=3914;AF=0.78155;AFR_AF=0.7685;AMR_AF=0.7839;AN=5008;CS=DEL_pindel;EAS_AF=0.7907;END=35009351;EUR_AF=0.7863;MEINFO=AluYa4b,2,281,-;NS=2504;SAS_AF=0.7832;SITEPOST=0.9559;SVTYPE=DEL_ALU	GT	1|1
15	35473633	ALU_umary_ALU_10622	T	<INS:ME:ALU>	.	.	AC=1224;AF=0.244409;AFR_AF=0.1089;AMR_AF=0.2896;AN=5008;CS=ALU_umary;EAS_AF=0.4603;EUR_AF=0.1829;MEINFO=AluYa5,1,275,-;NS=2504;SAS_AF=0.2362;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=CCCTGTGTTCACTATTCTT	GT	0|1
15	39372403	UW_VH_13203	C	<CN0>	100	PASS	AC=2366;AF=0.472444;AFR_AF=0.2995;AMR_AF=0.4813;AN=5008;CIEND=0,467;CIPOS=-602,0;CS=DEL_union;EAS_AF=0.6677;END=39373464;EUR_AF=0.4384;MC=UW_VH_21895,UW_VH_4749,UW_VH_13656,SI_BD_13997,BI_GS_DEL1_B1_P2357_367,EM_DL_DEL10347531,UW_VH_1592;NS=2504;SAS_AF=0.5337;SVTYPE=DEL	GT	1|0
15	39691605	ALU_umary_ALU_10647	C	<INS:ME:ALU>	.	.	AC=1914;AF=0.382188;AFR_AF=0.3162;AMR_AF=0.4539;AN=5008;CS=ALU_umary;EAS_AF=0.3562;EUR_AF=0.4503;MEINFO=AluYc1,36,281,+;NS=2504;SAS_AF=0.3773;SITEPOST=1;SVLEN=245;SVTYPE=ALU;TSD=TAAATGTCTGTGTTC	GT	1|1
15	39744385	BI_GS_DEL1_B5_P2357_1030	G	<CN0>	100	PASS	AC=3476;AF=0.694089;AFR_AF=0.4304;AMR_AF=0.7853;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.87;END=39744852;EUR_AF=0.7495;MC=UW_VH_1879,DEL_pindel_41865;NS=2504;SAS_AF=0.7474;SVTYPE=DEL	GT	1|1
15	41100332	ALU_umary_ALU_10654	T	<INS:ME:ALU>	.	.	AC=1379;AF=0.275359;AFR_AF=0.2746;AMR_AF=0.2349;AN=5008;CS=ALU_umary;EAS_AF=0.2004;EUR_AF=0.3241;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3323;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CAAAGCTACTCTTT	GT	0|1
15	41604020	DEL_pindel_41903	TCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCCAGCCAATAAGAATTCTTTTTTTTTTTTTCCACACAGAGTTTCGCTCTCAATGGCAAGCTCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAAAAGCTGGGATTATAGGCATGCGCCAACACGCCCGGCTAATTTTGTATTTTTAGTAGAGATGGGATTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCCGACCTGAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATAAGCCACCATGCCCAGCCTTCTTTTTTTCTTTTTTTTTTTTTTGAGACAGATTTTCACTCTTGTTGCTCAGGCTAGAGTGCAATGGCATGATCTTGC	T	.	PASS	AC=457;AF=0.091254;AFR_AF=0.0083;AMR_AF=0.1239;AN=5008;CS=DEL_pindel;EAS_AF=0.0079;END=41604430;EUR_AF=0.2018;NS=2504;SAS_AF=0.1524;SITEPOST=0.9985;SVTYPE=DEL	GT	1|0
15	42017735	DEL_pindel_41907	AAAATAAATAAGTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAATAAATAAATAAAT	A	.	PASS	AC=3100;AF=0.61901;AFR_AF=0.5287;AMR_AF=0.647;AN=5008;CS=DEL_pindel;EAS_AF=0.6716;END=42018067;EUR_AF=0.6382;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6472;SITEPOST=0.9802;SVTYPE=DEL_ALU	GT	1|1
15	45569912	ALU_umary_ALU_10670	T	<INS:ME:ALU>	.	.	AC=1237;AF=0.247005;AFR_AF=0.2685;AMR_AF=0.2262;AN=5008;CS=ALU_umary;EAS_AF=0.0714;EUR_AF=0.3549;MEINFO=AluYa5,1,279,-;NS=2504;SAS_AF=0.3027;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0|1
15	46067964	DEL_pindel_41974	TCAGTACTCAGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=3066;AF=0.61222;AFR_AF=0.6384;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.4444;END=46068314;EUR_AF=0.6958;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.5982;SITEPOST=0.99465;SVTYPE=DEL_ALU	GT	1|1
15	46126006	ALU_umary_ALU_10674	C	<INS:ME:ALU>	.	.	AC=791;AF=0.157947;AFR_AF=0.0461;AMR_AF=0.1455;AN=5008;CS=ALU_umary;EAS_AF=0.2312;EUR_AF=0.2386;MEINFO=AluYa8,3,281,+;NS=2504;SAS_AF=0.1595;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GAAAATTATGCAAAATCC	GT	0|1
15	46860705	BI_GS_DEL1_B4_P2364_197	C	<CN0>	100	PASS	AC=1600;AF=0.319489;AFR_AF=0.4365;AMR_AF=0.1254;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4276;END=46861165;EUR_AF=0.166;MC=DEL_pindel_41990;NS=2504;SAS_AF=0.3456;SVTYPE=DEL	GT	1|0
15	47507342	L1_umary_LINE1_2640	A	<INS:ME:LINE1>	.	.	AC=1431;AF=0.285743;AFR_AF=0.4569;AMR_AF=0.268;AN=5008;CS=L1_umary;EAS_AF=0.0913;EUR_AF=0.3171;MEINFO=LINE1,21,6019,-;NS=2504;SAS_AF=0.2352;SITEPOST=1;SVLEN=5998;SVTYPE=LINE1;TSD=TTCAATTGCATTTA	GT	1|1
15	47720633	DEL_pindel_41995	GTAAAAAAGTATTTAGGCGCAGATCTACCCTTAAAAGTGGGTAAAATGGGGCAAGGTGCAGTGGGTCACACCTGTAATCCCAGCACTTTAGGATTTAGGAGGCCAAGGTAGGTGGATTGCTTGAGGTCAAGAGTTCAAGACCAACATGGCCAACAGGAGGAAGCCCTGTCTCTAC	G	.	PASS	AC=2559;AF=0.510982;AFR_AF=0.4652;AMR_AF=0.5245;AN=5008;CS=DEL_pindel;EAS_AF=0.5149;END=47720807;EUR_AF=0.5368;NS=2504;SAS_AF=0.5327;SITEPOST=0.9983;SVTYPE=DEL	GT	1|1
15	49544866	UW_VH_2259	T	<CN0>	100	PASS	AC=631;AF=0.125998;AFR_AF=0.0787;AMR_AF=0.1513;AN=5008;CIEND=0,360;CIPOS=-429,0;CS=DEL_union;EAS_AF=0.006;END=49547867;EUR_AF=0.2316;MC=UW_VH_24870,SI_BD_14058,UW_VH_17669,BI_GS_DEL1_B2_P2367_357,YL_CN_BEB_2784;NS=2504;SAS_AF=0.1871;SVTYPE=DEL	GT	1|0
15	52525183	DEL_pindel_42092	AAAATAAATAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCAAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAATTAAAAAAAAAAAAAAATAAAT	A	.	PASS	AC=2423;AF=0.483826;AFR_AF=0.4183;AMR_AF=0.6009;AN=5008;CS=DEL_pindel;EAS_AF=0.3175;END=52525516;EUR_AF=0.663;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4765;SITEPOST=0.9925;SVTYPE=DEL_ALU	GT	0|1
15	54188220	ALU_umary_ALU_10716	C	<INS:ME:ALU>	.	.	AC=839;AF=0.167532;AFR_AF=0.1861;AMR_AF=0.2003;AN=5008;CS=ALU_umary;EAS_AF=0.2103;EUR_AF=0.1103;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.1339;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TAAAATGCATCTC	GT	0|1
15	55429892	DEL_pindel_42144	GTAAAGCAAGTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCGATCTTGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=3091;AF=0.617212;AFR_AF=0.5809;AMR_AF=0.634;AN=5008;CS=DEL_pindel;EAS_AF=0.63;END=55430213;EUR_AF=0.6412;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.6166;SITEPOST=0.9505;SVTYPE=DEL_ALU	GT	0|1
15	58282108	DEL_pindel_42195	CAAAAATGACAGGACGGAGCTTGCAGTGAGCCGAGATTGCGTCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	C	.	PASS	AC=1709;AF=0.341254;AFR_AF=0.3389;AMR_AF=0.3617;AN=5008;CS=DEL_pindel;EAS_AF=0.3006;END=58282214;EUR_AF=0.4682;MEINFO=AluYb,211,281,+;NS=2504;SAS_AF=0.2413;SITEPOST=0.9989;SVTYPE=DEL_ALU	GT	1|1
15	59712886	DEL_pindel_42211	AAGGAAGGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=4306;AF=0.859824;AFR_AF=0.8442;AMR_AF=0.8689;AN=5008;CS=DEL_pindel;EAS_AF=0.8482;END=59713217;EUR_AF=0.8767;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.8691;SITEPOST=0.9807;SVTYPE=DEL_ALU	GT	1|1
15	61328974	L1_umary_LINE1_2659	T	<INS:ME:LINE1>	.	.	AC=398;AF=0.0794728;AFR_AF=0.1271;AMR_AF=0.0504;AN=5008;CS=L1_umary;EAS_AF=0.0327;EUR_AF=0.0706;MEINFO=LINE1,4552,6019,-;NS=2504;SAS_AF=0.093;SITEPOST=1;SVLEN=1467;SVTYPE=LINE1;TSD=TAGAGCAGAGATTTCT	GT	1|0
15	64633178	DEL_pindel_42300	TAATTTTTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGGTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCAATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2831;AF=0.565296;AFR_AF=0.5295;AMR_AF=0.6182;AN=5008;CS=DEL_pindel;EAS_AF=0.5923;END=64633503;EUR_AF=0.6193;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.4928;SITEPOST=0.9752;SVTYPE=DEL_ALU	GT	1|1
15	64664107	DEL_pindel_42301	TTTTTAACCCACCTCCTGCACAAAAAATGGTCAATTTTTAAGTTGTAAAAATTATTCAACATGTACAAAGTCACCTCTTAATTTCAAGATTAATCAAATACGCCTTCAAAGGAAATCAAC	T	.	PASS	AC=2536;AF=0.50639;AFR_AF=0.4448;AMR_AF=0.6081;AN=5008;CS=DEL_pindel;EAS_AF=0.5933;END=64664226;EUR_AF=0.5616;NS=2504;SAS_AF=0.3712;SITEPOST=0.9893;SVTYPE=DEL	GT	0|1
15	66633812	DEL_pindel_42359	TAAGAATGTTGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4083;AF=0.815296;AFR_AF=0.7988;AMR_AF=0.8271;AN=5008;CS=DEL_pindel;EAS_AF=0.8214;END=66634133;EUR_AF=0.8181;MEINFO=AluYa4_1,1,281,+;NS=2504;SAS_AF=0.82;SITEPOST=0.9665;SVTYPE=DEL_ALU	GT	1|1
15	66877660	BI_GS_DEL1_B1_P2384_748	C	<CN0>	100	PASS	AC=934;AF=0.186502;AFR_AF=0.1135;AMR_AF=0.2637;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0744;END=66878428;EUR_AF=0.2416;MC=UW_VH_1087;NS=2504;SAS_AF=0.2894;SVTYPE=DEL	GT	1|0
15	67868283	UW_VH_2439	A	<CN0>	100	PASS	AC=690;AF=0.13778;AFR_AF=0.059;AMR_AF=0.098;AN=5008;CIEND=0,394;CIPOS=-317,0;CS=DEL_union;EAS_AF=0.2212;END=67869396;EUR_AF=0.1372;MC=BI_GS_DEL1_B1_P2385_836;NS=2504;SAS_AF=0.1871;SVTYPE=DEL	GT	0|1
15	70408637	ALU_umary_ALU_10797	C	<INS:ME:ALU>	.	.	AC=2151;AF=0.429513;AFR_AF=0.4501;AMR_AF=0.4121;AN=5008;CS=ALU_umary;EAS_AF=0.376;EUR_AF=0.4125;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4867;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAAAGAGCGTC	GT	1|0
15	71708614	UW_VH_3789	A	<CN0>	100	PASS	AC=2520;AF=0.503195;AFR_AF=0.4266;AMR_AF=0.6643;AN=5008;CIEND=0,420;CIPOS=-474,0;CS=DEL_union;EAS_AF=0.5784;END=71713685;EUR_AF=0.4811;MC=SI_BD_14166,YL_CN_PUR_3972,EM_DL_DEL33617;NS=2504;SAS_AF=0.4376;SVTYPE=DEL	GT	1|0
15	71881570	BI_GS_DEL1_B4_P2389_174	A	<CN0>	100	PASS	AC=991;AF=0.197883;AFR_AF=0.09;AMR_AF=0.2363;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1944;END=71882968;EUR_AF=0.3191;MC=YL_CN_FIN_3092,SI_BD_14169,YL_CN_GBR_3269,UW_VH_1090,EM_DL_DEL10362248,YL_CN_GWD_4543;NS=2504;SAS_AF=0.1953;SVTYPE=DEL	GT	1|0
15	72385965	EM_DL_DEL33633	A	<CN0>	100	PASS	AC=2263;AF=0.451877;AFR_AF=0.059;AMR_AF=0.6052;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3601;END=72388158;EUR_AF=0.7416;MC=YL_CN_CHB_3331,YL_CN_CHS_3405,YL_CN_ACB_3761,YL_CN_MSL_3084,BI_GS_DEL1_B1_P2390_279;NS=2504;SAS_AF=0.6708;SVTYPE=DEL	GT	1|1
15	72639551	ALU_umary_ALU_10809	T	<INS:ME:ALU>	.	.	AC=1921;AF=0.383586;AFR_AF=0.1641;AMR_AF=0.415;AN=5008;CS=ALU_umary;EAS_AF=0.4405;EUR_AF=0.5;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4796;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CAGAAATAGTTCTT	GT	0|1
15	73983319	ALU_umary_ALU_10812	T	<INS:ME:ALU>	.	.	AC=1163;AF=0.232228;AFR_AF=0.121;AMR_AF=0.2464;AN=5008;CS=ALU_umary;EAS_AF=0.2738;EUR_AF=0.3171;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.2423;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TATGCTTTT	GT	1|1
15	76884546	DUP_gs_CNV_15_76884546_76895794	A	<CN0>,<CN2>	.	PASS	AC=1545,1;AF=0.308506,0.00019968;AFR_AF=0.0666,0;AMR_AF=0.536,0;AN=5008;CS=DUP_gs;EAS_AF=0.2619,0;END=76895794;EUR_AF=0.505,0.001;MC=EM_DL_DEL33767,BI_GS_DEL1_B1_P2394_751,YL_CN_CDX_2818,SI_BD_14203;NS=2504;SAS_AF=0.32,0;SITEPOST=1;SVTYPE=CNV	GT	0|1
15	77092501	ALU_umary_ALU_10821	T	<INS:ME:ALU>	.	.	AC=1055;AF=0.210663;AFR_AF=0.0424;AMR_AF=0.33;AN=5008;CS=ALU_umary;EAS_AF=0.1905;EUR_AF=0.3539;MEINFO=AluUndef,25,281,-;NS=2504;SAS_AF=0.227;SITEPOST=1;SVLEN=256;SVTYPE=ALU;TSD=ATACATGGATATTTTT	GT	0|1
15	77330749	BI_GS_DEL1_B4_P2395_67	C	<CN0>	100	PASS	AC=1912;AF=0.381789;AFR_AF=0.0703;AMR_AF=0.5288;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.3016;END=77332719;EUR_AF=0.6789;MC=UW_VH_7722,EM_DL_DEL10364514,SI_BD_14206,YL_CN_FIN_3099;NS=2504;SAS_AF=0.4755;SVTYPE=DEL	GT	1|0
15	77851960	BI_GS_DEL1_B3_P2395_29	A	<CN0>	100	PASS	AC=224;AF=0.0447284;AFR_AF=0.0076;AMR_AF=0.1037;AN=5008;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.006;END=77853175;EUR_AF=0.0755;MC=EM_DL_DEL10364697;NS=2504;SAS_AF=0.0613;SVTYPE=DEL	GT	0|1
15	77910861	DEL_pindel_42579	ACTGTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=4108;AF=0.820288;AFR_AF=0.8366;AMR_AF=0.8343;AN=5008;CS=DEL_pindel;EAS_AF=0.8393;END=77911235;EUR_AF=0.8231;MEINFO=AluYa5a1,2,281,-;NS=2504;SAS_AF=0.7658;SITEPOST=0.9716;SVTYPE=DEL_ALU	GT	0|1
15	79084263	DEL_pindel_42616	GGAAATGGCTGGGGAAAGCCATCTGCTCTTTTAAAACTCCCTCAGAACAAAAAAGAGGCCAGCCCATGACTGGGGACAGCTGGCAGGTTCCCA	G	.	PASS	AC=1118;AF=0.223243;AFR_AF=0.0961;AMR_AF=0.2882;AN=5008;CS=DEL_pindel;EAS_AF=0.0913;END=79084355;EUR_AF=0.4215;NS=2504;SAS_AF=0.2812;SITEPOST=1;SVTYPE=DEL	GT	0|1
15	79891843	DEL_pindel_42634	TAGAAGCACAGAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2058;AF=0.410942;AFR_AF=0.4175;AMR_AF=0.2882;AN=5008;CS=DEL_pindel;EAS_AF=0.5754;END=79892164;EUR_AF=0.33;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.4029;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	0|1
15	83551623	BI_GS_DEL1_B1_P2401_259	C	<CN0>	100	PASS	AC=3296;AF=0.658147;AFR_AF=0.6921;AMR_AF=0.6081;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8452;END=83557675;EUR_AF=0.5606;MEINFO=LINE1,2,6019,-;NS=2504;SAS_AF=0.5552;SVTYPE=DEL_LINE1	GT	1|0
15	86057007	BI_GS_DEL1_B2_P2404_39	C	<CN0>	100	PASS	AC=1146;AF=0.228834;AFR_AF=0.3805;AMR_AF=0.2176;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1766;END=86059202;EUR_AF=0.1909;MC=UW_VH_17773,UW_VH_12155,YL_CN_TSI_3320,EM_DL_DEL34076,UW_VH_5355,UW_VH_24772,UW_VH_20492,UW_VH_1596,UW_VH_20965,SI_BD_14248,UW_VH_17703;NS=2504;SAS_AF=0.1247;SVTYPE=DEL	GT	1|0
15	91402096	DEL_pindel_42869	TAGAAATGTCTTTCATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGATTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1567;AF=0.312899;AFR_AF=0.4516;AMR_AF=0.3026;AN=5008;CS=DEL_pindel;EAS_AF=0.1577;END=91402416;EUR_AF=0.3151;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.2904;SITEPOST=0.9919;SVTYPE=DEL_ALU	GT	0|1
15	94819903	ALU_umary_ALU_10897	G	<INS:ME:ALU>	.	.	AC=971;AF=0.19389;AFR_AF=0.3253;AMR_AF=0.1585;AN=5008;CS=ALU_umary;EAS_AF=0.1667;EUR_AF=0.1342;MEINFO=AluYa5,5,281,+;NS=2504;SAS_AF=0.1309;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAATAAGAAATATTTGG	GT	0|1
15	94933278	DEL_pindel_42927	CATATATATATATATATATATATATATATATATATATATATGTATATATATATATATATATATATGTAT	C	.	PASS	AC=1394;AF=0.278355;AFR_AF=0.0983;AMR_AF=0.3746;AN=5008;CS=DEL_pindel;EAS_AF=0.2599;END=94933346;EUR_AF=0.4901;NS=2504;SAS_AF=0.2546;SITEPOST=0.994;SVTYPE=DEL	GT	1|0
15	98817015	BI_GS_DEL1_B2_P2416_642	A	<CN0>	100	PASS	AC=1648;AF=0.329073;AFR_AF=0.1513;AMR_AF=0.3631;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3175;END=98817425;EUR_AF=0.4344;NS=2504;SAS_AF=0.4489;SVTYPE=DEL	GT	1|0
15	98842312	UW_VH_23924	A	<CN0>	100	PASS	AC=1070;AF=0.213658;AFR_AF=0.2352;AMR_AF=0.2896;AN=5008;CIEND=0,411;CIPOS=-313,0;CS=DEL_union;EAS_AF=0.2034;END=98843808;EUR_AF=0.1203;MC=BI_GS_DEL1_B2_P2416_667,EM_DL_DEL10374044,UW_VH_1100,UW_VH_10238,SI_BD_14323,YL_CN_LWK_3222,YL_CN_PEL_3039;NS=2504;SAS_AF=0.2372;SVTYPE=DEL	GT	1|0
15	98900055	BI_GS_DEL1_B4_P2416_204	C	<CN0>	100	PASS	AC=2420;AF=0.483227;AFR_AF=0.4448;AMR_AF=0.402;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.6905;END=98900632;EUR_AF=0.4095;MC=SI_BD_14324,UW_VH_1101;NS=2504;SAS_AF=0.455;SVTYPE=DEL	GT	1|1
15	99574506	BI_GS_DEL1_B1_P2417_554	T	<CN0>	100	PASS	AC=2729;AF=0.544928;AFR_AF=0.3654;AMR_AF=0.5591;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5367;END=99575633;EUR_AF=0.7117;MC=UW_VH_14448,UW_VH_4608,UW_VH_6166,UW_VH_25235,UW_VH_15151,YL_CN_GWD_4591,UW_VH_18942,EM_DL_DEL10374467,UW_VH_19444,UW_VH_20581,UW_VH_14324,UW_VH_11566,UW_VH_18725,UW_VH_20439,UW_VH_5292,UW_VH_14531,UW_VH_13125,UW_VH_11667,UW_VH_17256,UW_VH_12849,UW_VH_12106,UW_VH_16719,UW_VH_13319,UW_VH_13789,UW_VH_38,UW_VH_19346,UW_VH_3040,UW_VH_21743,UW_VH_20938;NS=2504;SAS_AF=0.6145;SVTYPE=DEL	GT	1|1
15	99630150	ALU_umary_ALU_10918	G	<INS:ME:ALU>	.	.	AC=2507;AF=0.500599;AFR_AF=0.503;AMR_AF=0.4856;AN=5008;CS=ALU_umary;EAS_AF=0.5089;EUR_AF=0.502;MEINFO=AluY,53,191,-;NS=2504;SAS_AF=0.498;SITEPOST=1;SVLEN=138;SVTYPE=ALU;TSD=CAGGTGTG	GT	1|0
15	100097884	DEL_pindel_43033	ACCCAGGGGGCGGAGGATGCAGTGAGCCAAGATGGAGCCACTGCACTCCAG	A	.	PASS	AC=1094;AF=0.21845;AFR_AF=0.0514;AMR_AF=0.2118;AN=5008;CS=DEL_pindel;EAS_AF=0.251;END=100097934;EUR_AF=0.3062;NS=2504;SAS_AF=0.3252;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
15	100416670	UW_VH_11486	G	<CN0>	100	PASS	AC=973;AF=0.194289;AFR_AF=0.0189;AMR_AF=0.1902;AN=5008;CIEND=0,362;CIPOS=-494,0;CS=DEL_union;EAS_AF=0.3383;END=100423244;EUR_AF=0.2276;MC=UW_VH_20953,BI_GS_DEL1_B5_P2418_491,UW_VH_2694,EM_DL_DEL34270,SI_BD_14330,YL_CN_ITU_3288,UW_VH_20905;NS=2504;SAS_AF=0.2515;SVTYPE=DEL	GT	1|0
15	100609946	BI_GS_DEL1_B1_P2418_589	A	<CN0>	100	PASS	AC=311;AF=0.0621006;AFR_AF=0.0779;AMR_AF=0.0677;AN=5008;CIEND=-33,34;CIPOS=-33,34;CS=DEL_union;EAS_AF=0.0645;END=100612578;EUR_AF=0.0696;MC=YL_CN_GWD_4596;NS=2504;SAS_AF=0.0266;SVTYPE=DEL	GT	1|0
15	100810993	ALU_umary_ALU_10921	T	<INS:ME:ALU>	.	.	AC=2747;AF=0.548522;AFR_AF=0.5197;AMR_AF=0.5317;AN=5008;CS=ALU_umary;EAS_AF=0.621;EUR_AF=0.4692;MEINFO=AluUndef,4,280,-;NS=2504;SAS_AF=0.6063;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=CCATTTTAAACATTTTT	GT	0|1
16	998832	UW_VH_24834	G	<CN0>	100	PASS	AC=2661;AF=0.53135;AFR_AF=0.7148;AMR_AF=0.4914;AN=5008;CIEND=0,444;CIPOS=-185,0;CS=DEL_union;EAS_AF=0.4097;END=1000718;EUR_AF=0.3678;NS=2504;SAS_AF=0.6053;SVTYPE=DEL	GT	1|1
16	5180176	BI_GS_DEL1_B1_P2426_129	T	<CN0>	100	PASS	AC=191;AF=0.038139;AFR_AF=0.0038;AMR_AF=0.049;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=5180669;EUR_AF=0.0885;NS=2504;SAS_AF=0.0644;SVTYPE=DEL	GT	0|1
16	6957702	UW_VH_1598	G	<CN0>	100	PASS	AC=61;AF=0.0121805;AFR_AF=0.0015;AMR_AF=0.0101;AN=5008;CIEND=0,270;CIPOS=-324,0;CS=DEL_union;EAS_AF=0;END=6958488;EUR_AF=0.0487;MC=BI_GS_DEL1_B5_P2427_1251,SI_BD_14445;NS=2504;SAS_AF=0.0031;SVTYPE=DEL	GT	1|0
16	8535509	ALU_umary_ALU_10954	A	<INS:ME:ALU>	.	.	AC=1703;AF=0.340056;AFR_AF=0.2655;AMR_AF=0.3501;AN=5008;CS=ALU_umary;EAS_AF=0.3998;EUR_AF=0.2724;MEINFO=AluUndef,38,281,+;NS=2504;SAS_AF=0.4417;SITEPOST=1;SVLEN=243;SVTYPE=ALU;TSD=AGAAACATCCTGAGAA	GT	0|1
16	8755309	UW_VH_12510	C	<CN0>	100	PASS	AC=766;AF=0.152955;AFR_AF=0.1989;AMR_AF=0.1643;AN=5008;CIEND=0,426;CIPOS=-364,0;CS=DEL_union;EAS_AF=0.0804;END=8756834;EUR_AF=0.1382;MC=UW_VH_2956,YL_CN_PEL_3071,YL_CN_CLM_2946,UW_VH_17424,EM_DL_DEL10380546,BI_GS_DEL1_B1_P2429_676,UW_VH_23336,YL_CN_YRI_4308;NS=2504;SAS_AF=0.1728;SVTYPE=DEL	GT	0|1
16	11683732	BI_GS_DEL1_B1_P2432_635	G	<CN0>	100	PASS	AC=2241;AF=0.447484;AFR_AF=0.6331;AMR_AF=0.3242;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5556;END=11685291;EUR_AF=0.3191;MC=UW_VH_1104,EM_DL_DEL10381738,YL_CN_MXL_2845,YL_CN_TSI_3360,YL_CN_PUR_4062,UW_VH_11718,YL_CN_CHS_3490,YL_CN_MSL_3138,YL_CN_ITU_3324,UW_VH_17721,YL_CN_KHV_3486,YL_CN_STU_3373,SI_BD_14475,YL_CN_ESN_3430;NS=2504;SAS_AF=0.3047;SVTYPE=DEL	GT	0|1
16	14075622	DEL_pindel_43472	TGCCTATACCTATTCTCATAAGGCCTGTCCTGATGCAGGATGGAAATGGGGGCTATAGGGAAAGGGCACTCAACTCTCTTTGTGTCACTAGATAATAGCTCAGAACTCTGAGGAACCTGG	T	.	PASS	AC=3756;AF=0.75;AFR_AF=0.4894;AMR_AF=0.7867;AN=5008;CS=DEL_pindel;EAS_AF=0.9246;END=14075741;EUR_AF=0.7346;NS=2504;SAS_AF=0.9121;SITEPOST=0.9997;SVTYPE=DEL	GT	1|1
16	15059676	DUP_gs_CNV_16_15059676_15076875	A	<CN2>,<CN3>	.	PASS	AC=3029,18;AF=0.604832,0.00359425;AFR_AF=0.711,0.0045;AMR_AF=0.5793,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.3165,0.002;END=15076875;EUR_AF=0.8082,0.003;NS=2504;SAS_AF=0.5675,0.0051;SITEPOST=0.9998;SVTYPE=CNV	GT	1|1
16	15080267	DUP_gs_CNV_16_15080267_15105113	A	<CN2>,<CN3>	.	PASS	AC=3042,19;AF=0.607428,0.00379393;AFR_AF=0.7156,0.003;AMR_AF=0.5807,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.3194,0.002;END=15105113;EUR_AF=0.8082,0.004;NS=2504;SAS_AF=0.5706,0.0061;SITEPOST=1;SVTYPE=CNV	GT	1|1
16	15099303	DUP_gs_CNV_16_15099303_15123498	T	<CN2>,<CN3>	.	PASS	AC=3025,19;AF=0.604034,0.00379393;AFR_AF=0.7118,0.0045;AMR_AF=0.5821,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.3135,0.002;END=15123498;EUR_AF=0.8042,0.003;NS=2504;SAS_AF=0.5675,0.0051;SITEPOST=1;SVTYPE=CNV	GT	1|1
16	16631704	DUP_gs_CNV_16_16631704_16651111	G	<CN0>,<CN2>	.	PASS	AC=107,243;AF=0.0213658,0.0485224;AFR_AF=0.0227,0.0749;AMR_AF=0.0086,0.0173;AN=5008;CS=DUP_gs;EAS_AF=0.0585,0.0516;END=16651111;EUR_AF=0.004,0.0288;NS=2504;SAS_AF=0.0082,0.0521;SITEPOST=0.9986;SVTYPE=CNV	GT	2|0
16	19230429	DEL_pindel_43528	AAATAATAAAACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATAATAATAAT	A	.	PASS	AC=3476;AF=0.694089;AFR_AF=0.739;AMR_AF=0.6499;AN=5008;CS=DEL_pindel;EAS_AF=0.7232;END=19230781;EUR_AF=0.6183;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7127;SITEPOST=0.98335;SVTYPE=DEL_ALU	GT	1|1
16	21239067	ALU_umary_ALU_10995	T	<INS:ME:ALU>	.	.	AC=960;AF=0.191693;AFR_AF=0.1422;AMR_AF=0.2896;AN=5008;CS=ALU_umary;EAS_AF=0.1091;EUR_AF=0.2555;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2086;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CCTGCAAGTTTTCT	GT	1|1
16	21518346	DUP_gs_CNV_16_21518346_21544882	G	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=4,4279,30,3,1;AF=0.00079872,0.854433,0.00599042,0.00059904,0.00019968;AFR_AF=0,0.9561,0.0061,0,0;AMR_AF=0.0029,0.8357,0.0043,0,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.7361,0.006,0.001,0;END=21544882;EUR_AF=0.002,0.8807,0.005,0,0;NS=2504;SAS_AF=0,0.8252,0.0082,0.002,0.001;SITEPOST=0.9999;SVTYPE=CNV	GT	2|2
16	21541685	DUP_gs_CNV_16_21541685_21569415	G	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=5,4249,13,5,2;AF=0.0009984,0.848442,0.00259585,0.0009984,0.00039936;AFR_AF=0,0.9501,0.003,0.0008,0;AMR_AF=0.0014,0.8242,0.0014,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.7163,0.005,0.002,0;END=21569415;EUR_AF=0.001,0.8777,0.001,0.001,0;NS=2504;SAS_AF=0.002,0.8344,0.002,0.001,0.002;SITEPOST=0.9995;SVTYPE=CNV	GT	2|2
16	21573321	DUP_gs_CNV_16_21573321_21580382	G	<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=4294,26,4,1;AF=0.857428,0.00519169,0.00079872,0.00019968;AFR_AF=0.9576,0.0053,0,0;AMR_AF=0.8401,0.0029,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.745,0.0079,0.002,0;END=21580382;EUR_AF=0.8847,0.005,0,0;NS=2504;SAS_AF=0.8221,0.0041,0.002,0.001;SITEPOST=0.9999;SVTYPE=CNV	GT	1|1
16	21588291	DUP_gs_CNV_16_21588291_21593314	C	<CN2>,<CN3>,<CN4>	.	PASS	AC=4287,14,6;AF=0.85603,0.00279553,0.00119808;AFR_AF=0.9637,0.0015,0.0015;AMR_AF=0.8429,0.0029,0;AN=5008;CS=DUP_gs;EAS_AF=0.7381,0.003,0.002;END=21593314;EUR_AF=0.8817,0.003,0;NS=2504;SAS_AF=0.8149,0.0041,0.002;SITEPOST=0.9982;SVTYPE=CNV	GT	1|1
16	22611652	DUP_gs_CNV_16_22611652_22662020	A	<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=4305,40,4,1;AF=0.859625,0.00798722,0.00079872,0.00019968;AFR_AF=0.9607,0.0053,0,0;AMR_AF=0.8372,0.0086,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.75,0.0079,0.002,0;END=22662020;EUR_AF=0.8837,0.0099,0,0;NS=2504;SAS_AF=0.8272,0.0092,0.002,0.001;SITEPOST=1;SVTYPE=CNV	GT	1|1
16	22623100	DUP_uwash_chr16_22623100_22783757	C	<CN2>,<CN3>,<CN4>	.	PASS	AC=4413,37,1;AF=0.88119,0.00738818,0.00019968;AFR_AF=0.9682,0.0053,0;AMR_AF=0.8689,0.0043,0;AN=5008;CS=DUP_uwash;EAS_AF=0.7857,0.0079,0;END=22783757;EUR_AF=0.9046,0.008,0;NS=2504;SAS_AF=0.8466,0.0112,0.001;SITEPOST=1;SVTYPE=CNV	GT	1|1
16	22650742	DUP_gs_CNV_16_22650742_22695701	A	<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=4305,42,4,1;AF=0.859625,0.00838658,0.00079872,0.00019968;AFR_AF=0.9607,0.0053,0,0;AMR_AF=0.8372,0.0086,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.749,0.0089,0.002,0;END=22695701;EUR_AF=0.8847,0.0109,0,0;NS=2504;SAS_AF=0.8272,0.0092,0.002,0.001;SITEPOST=1;SVTYPE=CNV	GT	1|1
16	23047727	UW_VH_10999	C	<CN0>	100	PASS	AC=3661;AF=0.73103;AFR_AF=0.8593;AMR_AF=0.4914;AN=5008;CIEND=0,502;CIPOS=-485,0;CS=DEL_union;EAS_AF=0.7778;END=23049533;EUR_AF=0.663;MC=UW_VH_4982,YL_CN_IBS_3130,YL_CN_BEB_2906,YL_CN_CHB_3459,YL_CN_TSI_3424,YL_CN_ASW_3498,YL_CN_GWD_4713,UW_VH_14568,YL_CN_STU_3446,UW_VH_3132,YL_CN_CEU_4314,YL_CN_ESN_3502,YL_CN_KHV_3553,YL_CN_ACB_3914,UW_VH_2648,SI_BD_14547,YL_CN_GBR_3409,YL_CN_GIH_2686,UW_VH_20988,YL_CN_PUR_4120,YL_CN_YRI_4390,YL_CN_PJL_3533,EM_DL_DEL10385609,YL_CN_ITU_3388;NS=2504;SAS_AF=0.7495;SVTYPE=DEL	GT	1|1
16	23528535	DEL_pindel_43587	GCCCAGCTAATTTTTTTCTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCTGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=2946;AF=0.588259;AFR_AF=0.5991;AMR_AF=0.6513;AN=5008;CS=DEL_pindel;EAS_AF=0.5437;END=23528848;EUR_AF=0.5954;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.5675;SITEPOST=0.9852;SVTYPE=DEL_ALU	GT	1|0
16	23865300	ALU_umary_ALU_11003	T	<INS:ME:ALU>	.	.	AC=1795;AF=0.358427;AFR_AF=0.2141;AMR_AF=0.3127;AN=5008;CS=ALU_umary;EAS_AF=0.4712;EUR_AF=0.4423;MEINFO=AluYa5a2,1,281,-;NS=2504;SAS_AF=0.3834;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGTCAAGGCACTTCTT	GT	1|1
16	23910886	DEL_pindel_43602	AATTACTTTTGTTCATTTGTAATTACTTATCCATAAGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGGTTTGTTGTCACCTGGGCTGGAGTGCAGTGATGCGACCATGGCTCACTATATTCAAAATCCTGGGCTCATGCGATCCTCCCACCTCAGCCTTCTGAGGAGCTGGGACCGTAGGCACGTGCCACCAGGCCCAGCAAATAAAATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGTAG	A	.	PASS	AC=2764;AF=0.551917;AFR_AF=0.4629;AMR_AF=0.6729;AN=5008;CS=DEL_pindel;EAS_AF=0.5784;END=23911192;EUR_AF=0.6501;NS=2504;SAS_AF=0.4581;SITEPOST=0.9994;SVTYPE=DEL	GT	1|1
16	25340109	BI_GS_DEL1_B1_P2446_269	A	<CN0>	100	PASS	AC=3546;AF=0.708067;AFR_AF=0.8956;AMR_AF=0.6931;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4762;END=25343128;EUR_AF=0.7137;MC=UW_VH_13338,UW_VH_5381,EM_DL_DEL35568,UW_VH_23106,YL_CN_FIN_3224,YL_CN_CHS_3566,SI_BD_14564,UW_VH_1110;NS=2504;SAS_AF=0.6984;SVTYPE=DEL	GT	0|1
16	26608023	DEL_pindel_43672	TCCTCTTCACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2800;AF=0.559105;AFR_AF=0.6044;AMR_AF=0.4654;AN=5008;CS=DEL_pindel;EAS_AF=0.6389;END=26608365;EUR_AF=0.5666;MEINFO=AluYb6_2,1,280,-;NS=2504;SAS_AF=0.4744;SITEPOST=0.9953;SVTYPE=DEL_ALU	GT	0|1
16	26963254	DEL_pindel_43684	AACCAAACAGAATGCTCCTTGGAAATGTCCCACTCGAGAGTGGGGAGGCTGGGGCATTTATCCACCACCTCACATCTGATGGTGGTTGAGGGTTTCCCCGGGGCTGTTAACTTCACTTCCTGGTTGCACCTGC	A	.	PASS	AC=1387;AF=0.276957;AFR_AF=0.0477;AMR_AF=0.4697;AN=5008;CS=DEL_pindel;EAS_AF=0.4851;END=26963386;EUR_AF=0.2853;NS=2504;SAS_AF=0.227;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
16	32328771	DUP_gs_CNV_16_32328771_32370968	A	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=27,84,3220,20,26;AF=0.00539137,0.0167732,0.642971,0.00399361,0.00519169;AFR_AF=0.0015,0.0371,0.8374,0.003,0.003;AMR_AF=0.0101,0.0058,0.4063,0,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.0099,0.0188,0.5427,0.004,0.0089;END=32370968;EUR_AF=0.003,0.0089,0.5189,0.005,0.005;NS=2504;SAS_AF=0.0051,0.0031,0.7791,0.0072,0.0072;SITEPOST=0.9997;SVTYPE=CNV	GT	3|0
16	32366481	DUP_gs_CNV_16_32366481_32410672	C	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=16,3134,109,8;AF=0.00319489,0.625799,0.0217652,0.00159744;AFR_AF=0,0.8033,0.0477,0.0008;AMR_AF=0.0058,0.3991,0.0043,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.0069,0.5317,0.0228,0.003;END=32410672;EUR_AF=0.002,0.5219,0.008,0.002;NS=2504;SAS_AF=0.0031,0.7505,0.0123,0.001;SITEPOST=0.9999;SVTYPE=CNV	GT	2|0
16	32418983	DUP_gs_CNV_16_32418983_32469917	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=13,3159,55,6;AF=0.00259585,0.630791,0.0109824,0.00119808;AFR_AF=0.0008,0.8116,0.028,0.0008;AMR_AF=0.0043,0.402,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.005,0.5446,0.006,0.002;END=32469917;EUR_AF=0.002,0.5129,0.005,0.001;NS=2504;SAS_AF=0.002,0.7587,0.0061,0.001;SITEPOST=0.9989;SVTYPE=CNV	GT	2|0
16	32600305	BI_GS_DEL1_B5_P2453_168	C	<CN0>	100	PASS	AC=945;AF=0.188698;AFR_AF=0.0265;AMR_AF=0.33;AN=5008;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.1369;END=32601869;EUR_AF=0.3926;MC=YL_CN_TSI_3465;NS=2504;SAS_AF=0.1513;SVTYPE=DEL	GT	0|1
16	32611029	DUP_gs_CNV_16_32611029_32642738	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=8,3124,126,9;AF=0.00159744,0.623802,0.0251597,0.00179712;AFR_AF=0,0.8086,0.0545,0.0008;AMR_AF=0.0029,0.3991,0.0029,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.003,0.5258,0.0248,0.004;END=32642738;EUR_AF=0.003,0.5149,0.0139,0.002;NS=2504;SAS_AF=0,0.7464,0.0133,0.001;SITEPOST=0.9999;SVTYPE=CNV	GT	2|0
16	32831659	DUP_gs_CNV_16_32831659_32863935	A	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=38,3012,28,61,8;AF=0.00758786,0.601438,0.00559105,0.0121805,0.00159744;AFR_AF=0.0053,0.7799,0.0023,0.034,0.0008;AMR_AF=0.0101,0.3977,0.0014,0.0014,0;AN=5008;CS=DUP_gs;EAS_AF=0.0099,0.504,0.0099,0.0079,0.004;END=32863935;EUR_AF=0.006,0.494,0.003,0.004,0.002;NS=2504;SAS_AF=0.0082,0.7157,0.0112,0.0031,0.001;SITEPOST=0.9989;SVTYPE=CNV	GT	2|0
16	33446163	DUP_gs_CNV_16_33446163_33480261	C	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=12,3153,82,14;AF=0.00239617,0.629593,0.0163738,0.00279553;AFR_AF=0.0008,0.8154,0.0356,0.0015;AMR_AF=0.0029,0.4063,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.005,0.5456,0.0139,0.003;END=33480261;EUR_AF=0.002,0.5099,0.0099,0.003;NS=2504;SAS_AF=0.002,0.7464,0.0102,0.0051;SITEPOST=0.9998;SVTYPE=CNV	GT	2|0
16	33467709	ALU_umary_ALU_11021	G	<INS:ME:ALU>	.	.	AC=105;AF=0.0209664;AFR_AF=0.0008;AMR_AF=0.0245;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0795;MEINFO=AluUndef,17,281,+;NS=2504;SAS_AF=0.0072;SITEPOST=1;SVLEN=264;SVTYPE=ALU;TSD=AAAATGTAATTAACG	GT	1|0
16	33470755	DUP_gs_CNV_16_33470755_33495606	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=12,3160,76,13;AF=0.00239617,0.63099,0.0151757,0.00259585;AFR_AF=0.0008,0.8139,0.0348,0.0008;AMR_AF=0.0043,0.4092,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.004,0.5466,0.0119,0.003;END=33495606;EUR_AF=0.002,0.5109,0.0089,0.003;NS=2504;SAS_AF=0.002,0.7515,0.0082,0.0051;SITEPOST=0.9997;SVTYPE=CNV	GT	2|0
16	33484521	DUP_gs_CNV_16_33484521_33543753	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=16,3155,83,10;AF=0.00319489,0.629992,0.0165735,0.00199681;AFR_AF=0.0015,0.8132,0.0378,0.0008;AMR_AF=0.0029,0.4049,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.005,0.5456,0.0109,0.003;END=33543753;EUR_AF=0.004,0.5129,0.0089,0.004;NS=2504;SAS_AF=0.0031,0.7495,0.0123,0.001;SITEPOST=0.9999;SVTYPE=CNV	GT	2|0
16	33524565	DUP_gs_CNV_16_33524565_33570784	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=15,3154,88,11;AF=0.00299521,0.629792,0.0175719,0.00219649;AFR_AF=0.0015,0.8185,0.0378,0.0015;AMR_AF=0.0058,0.4063,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.004,0.5427,0.0129,0.003;END=33570784;EUR_AF=0.002,0.507,0.0109,0.004;NS=2504;SAS_AF=0.0031,0.7495,0.0133,0.001;SITEPOST=0.9999;SVTYPE=CNV	GT	2|0
16	33586835	BI_GS_DEL1_B4_P2454_71	T	<CN0>	100	PASS	AC=262;AF=0.0523163;AFR_AF=0.0023;AMR_AF=0.1427;AN=5008;CIEND=-38,38;CIPOS=-38,38;CS=DEL_union;EAS_AF=0.0843;END=33590310;EUR_AF=0.0606;NS=2504;SAS_AF=0.0143;SVTYPE=DEL	GT	1|0
16	33588532	DUP_gs_CNV_16_33588532_33626594	C	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=11,3142,101,13;AF=0.00219649,0.627396,0.0201677,0.00259585;AFR_AF=0.0008,0.8215,0.0393,0.0015;AMR_AF=0.0029,0.402,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.004,0.5417,0.0179,0.004;END=33626594;EUR_AF=0.001,0.507,0.0119,0.004;NS=2504;SAS_AF=0.0031,0.7372,0.0184,0.002;SITEPOST=0.9999;SVTYPE=CNV	GT	2|0
16	34457085	DUP_gs_CNV_16_34457085_34712399	A	<CN0>,<CN2>	.	PASS	AC=1,159;AF=0.00019968,0.0317492;AFR_AF=0,0.0008;AMR_AF=0.0014,0.0504;AN=5008;CS=DUP_gs;EAS_AF=0,0.002;END=34712399;EUR_AF=0,0.1004;NS=2504;SAS_AF=0,0.0204;SITEPOST=1;SVTYPE=CNV	GT	2|0
16	46979627	DEL_pindel_43859	CGACACAGGAGGATTGCTTGGACACAGGAGGATTGCTTGGACACAGGAGGATTGCTTG	C	.	PASS	AC=1407;AF=0.28095;AFR_AF=0.357;AMR_AF=0.3012;AN=5008;CS=DEL_pindel;EAS_AF=0.2698;END=46979684;EUR_AF=0.2386;NS=2504;SAS_AF=0.2188;SITEPOST=0.9972;SVTYPE=DEL	GT	1|0
16	48508916	EM_DL_DEL39092	T	<CN0>	100	PASS	AC=2750;AF=0.549121;AFR_AF=0.3427;AMR_AF=0.572;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.8393;END=48511376;EUR_AF=0.4543;MC=SI_BD_14648,YL_CN_CLM_3075,YL_CN_FIN_3295,YL_CN_CHB_3549,BI_GS_DEL1_B1_P2469_468,UW_VH_1115;NS=2504;SAS_AF=0.6104;SVTYPE=DEL	GT	1|0
16	48816867	DEL_pindel_43895	TTATTGTTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1560;AF=0.311502;AFR_AF=0.4418;AMR_AF=0.3847;AN=5008;CS=DEL_pindel;EAS_AF=0.2093;END=48817185;EUR_AF=0.2068;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.2965;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	1|0
16	49036072	DEL_pindel_43904	TAGAAAGATAGGCCTCACCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3420;AF=0.682907;AFR_AF=0.6452;AMR_AF=0.683;AN=5008;CS=DEL_pindel;EAS_AF=0.6706;END=49036207;EUR_AF=0.7316;MEINFO=AluYa8,204,282,+;NS=2504;SAS_AF=0.6963;SITEPOST=0.98095;SVTYPE=DEL_ALU	GT	1|1
16	49979396	DEL_pindel_43922	GAAATCTGTGCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGAGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=2305;AF=0.460264;AFR_AF=0.6331;AMR_AF=0.4078;AN=5008;CS=DEL_pindel;EAS_AF=0.4563;END=49979710;EUR_AF=0.3797;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3507;SITEPOST=0.9942;SVTYPE=DEL_ALU	GT	1|0
16	52032355	UW_VH_1892	T	<CN0>	100	PASS	AC=4;AF=0.00079872;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=0,112;CIPOS=-95,0;CS=DEL_union;EAS_AF=0;END=52033598;EUR_AF=0.004;MC=BI_GS_DEL1_B1_P2473_48;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	1|0
16	52904248	DEL_pindel_43981	GTGGTGCACGACTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGAAGAATTGCTTAAACCTAGGAGGTGGAGGTTGCAGTGAGCCAAGATGGTGCCGCTGCACTCCAGCCTCGGTGACAGAGTGAC	G	.	PASS	AC=2112;AF=0.421725;AFR_AF=0.2708;AMR_AF=0.5;AN=5008;CS=DEL_pindel;EAS_AF=0.5724;END=52904373;EUR_AF=0.4384;NS=2504;SAS_AF=0.3978;SITEPOST=0.9998;SVTYPE=DEL	GT	1|1
16	53091851	DUP_gs_CNV_16_53091851_53095128	T	<CN0>,<CN2>	.	PASS	AC=4,3;AF=0.00079872,0.00059904;AFR_AF=0,0;AMR_AF=0,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.001;END=53095128;EUR_AF=0,0.002;NS=2504;SAS_AF=0.0041,0;SITEPOST=0.99745;SVTYPE=CNV	GT	0|2
16	53874981	ALU_umary_ALU_11050	G	<INS:ME:ALU>	.	.	AC=2109;AF=0.421126;AFR_AF=0.4365;AMR_AF=0.379;AN=5008;CS=ALU_umary;EAS_AF=0.4157;EUR_AF=0.3757;MEINFO=AluYb8,1,270,+;NS=2504;SAS_AF=0.4826;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AATAAGAAGTGCCTG	GT	0|1
16	54660356	DEL_pindel_44010	TAAAAATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGCAGGAGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1492;AF=0.297923;AFR_AF=0.4274;AMR_AF=0.2464;AN=5008;CS=DEL_pindel;EAS_AF=0.3482;END=54660665;EUR_AF=0.173;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.2362;SITEPOST=0.9961;SVTYPE=DEL_ALU	GT	1|0
16	55798890	DUP_gs_CNV_16_55798890_55822423	A	<CN0>,<CN2>	.	PASS	AC=1001,7;AF=0.19988,0.00139776;AFR_AF=0.0272,0.003;AMR_AF=0.2248,0;AN=5008;CS=DUP_gs;EAS_AF=0.4117,0.001;END=55822423;EUR_AF=0.1352,0;NS=2504;SAS_AF=0.2638,0.002;SITEPOST=1;SVTYPE=CNV	GT	1|0
16	55832207	DUP_gs_CNV_16_55832207_55864521	A	<CN0>,<CN2>,<CN3>	.	PASS	AC=7,1005,1;AF=0.00139776,0.200679,0.00019968;AFR_AF=0.0038,0.0287,0;AMR_AF=0,0.2262,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.4127,0.001;END=55864521;EUR_AF=0,0.1362,0;NS=2504;SAS_AF=0.001,0.2628,0;SITEPOST=1;SVTYPE=CNV	GT	2|0
16	58647190	EM_DL_DEL39322	G	<CN0>	100	PASS	AC=1154;AF=0.230431;AFR_AF=0.1967;AMR_AF=0.2882;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0456;END=58650264;EUR_AF=0.4374;MC=YL_CN_CDX_3051,BI_GS_DEL1_B1_P2479_521,UW_VH_1118;NS=2504;SAS_AF=0.2127;SVTYPE=DEL	GT	1|0
16	58673838	BI_GS_DEL1_B4_P2479_129	A	<CN0>	100	PASS	AC=1030;AF=0.205671;AFR_AF=0.1127;AMR_AF=0.3127;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1855;END=58677346;EUR_AF=0.1561;MC=UW_VH_11569,YL_CN_JPT_3753,UW_VH_1603,UW_VH_22750,UW_VH_22029,SI_BD_14681,EM_DL_DEL39331,UW_VH_19336;NS=2504;SAS_AF=0.3272;SVTYPE=DEL	GT	0|1
16	58819558	DEL_pindel_44085	AGCCAGGTGCAGGATATAATCTCCTGGTGTGCTGTTTGCTGAGACCCTTGGAAGAGCGCAGTATTACAGTGAGAGT	A	.	PASS	AC=1472;AF=0.29393;AFR_AF=0.1362;AMR_AF=0.3429;AN=5008;CS=DEL_pindel;EAS_AF=0.1954;END=58819633;EUR_AF=0.495;NS=2504;SAS_AF=0.3671;SITEPOST=0.9997;SVTYPE=DEL	GT	0|1
16	60032082	DEL_pindel_44124	TGGGAAGATTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCCC	T	.	PASS	AC=2967;AF=0.592452;AFR_AF=0.5908;AMR_AF=0.6643;AN=5008;CS=DEL_pindel;EAS_AF=0.5169;END=60032396;EUR_AF=0.6272;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.5859;SITEPOST=0.9889;SVTYPE=DEL_ALU	GT	0|1
16	61092204	ALU_umary_ALU_11073	T	<INS:ME:ALU>	.	.	AC=1123;AF=0.224241;AFR_AF=0.1498;AMR_AF=0.2896;AN=5008;CS=ALU_umary;EAS_AF=0.3284;EUR_AF=0.2296;MEINFO=AluYb7_4,5,279,-;NS=2504;SAS_AF=0.1656;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=CCTACAACTATCTT	GT	1|0
16	63442423	DEL_pindel_44210	GCTGAAAAATAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCGCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=2663;AF=0.531749;AFR_AF=0.5893;AMR_AF=0.4914;AN=5008;CS=DEL_pindel;EAS_AF=0.6171;END=63442753;EUR_AF=0.5;MEINFO=AluYa4_5,2,281,-;NS=2504;SAS_AF=0.4274;SITEPOST=0.9931;SVTYPE=DEL_ALU	GT	1|0
16	63756306	DEL_pindel_44218	GATTGCTGGGTCAAATGATATTTCTGCTTCTAGATCCTTGAGGAATCACCGTACTGTCTTCCACAATGGTTGAACGAATTTAC	G	.	PASS	AC=1357;AF=0.270966;AFR_AF=0.1067;AMR_AF=0.3199;AN=5008;CS=DEL_pindel;EAS_AF=0.2698;END=63756388;EUR_AF=0.3767;NS=2504;SAS_AF=0.3507;SITEPOST=1;SVTYPE=DEL	GT	1|0
16	70181849	DUP_gs_CNV_16_70181849_70196732	T	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=7,2200,76,109,14;AF=0.00139776,0.439297,0.0151757,0.0217652,0.00279553;AFR_AF=0.0008,0.5045,0.0076,0.0227,0.003;AMR_AF=0.0058,0.3919,0.0086,0.013,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.3065,0.0109,0.0129,0.006;END=70196732;EUR_AF=0,0.5368,0.0229,0.0338,0.003;NS=2504;SAS_AF=0.001,0.4213,0.0266,0.0235,0.001;SITEPOST=0.9992;SVTYPE=CNV	GT	2|2
16	70553009	DEL_pindel_44337	TAGGATTTGCATTTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCATTGCAAGCTCCGCTTCCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2598;AF=0.51877;AFR_AF=0.6747;AMR_AF=0.4222;AN=5008;CS=DEL_pindel;EAS_AF=0.4812;END=70553329;EUR_AF=0.3767;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.5613;SITEPOST=0.9902;SVTYPE=DEL_ALU	GT	1|0
16	71866702	DUP_gs_CNV_16_71866702_71869740	C	<CN0>,<CN2>	.	PASS	AC=4,6;AF=0.00079872,0.00119808;AFR_AF=0,0.0015;AMR_AF=0.0043,0;AN=5008;CS=DUP_gs;EAS_AF=0,0;END=71869740;EUR_AF=0.001,0.003;NS=2504;SAS_AF=0,0.001;SITEPOST=0.9335;SVTYPE=CNV	GT	0|2
16	72753292	DEL_pindel_44358	CATAGATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	C	.	PASS	AC=3989;AF=0.796526;AFR_AF=0.8419;AMR_AF=0.6729;AN=5008;CS=DEL_pindel;EAS_AF=0.6875;END=72753597;EUR_AF=0.8658;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.864;SITEPOST=0.9888;SVTYPE=DEL_ALU	GT	0|1
16	74393945	DUP_gs_CNV_16_74393945_74434300	G	<CN2>,<CN3>,<CN4>	.	PASS	AC=2130,182,69;AF=0.425319,0.0363418,0.013778;AFR_AF=0.4977,0.0356,0.0091;AMR_AF=0.3775,0.0159,0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.2708,0.0327,0.0079;END=74434300;EUR_AF=0.5189,0.0497,0.0348;NS=2504;SAS_AF=0.4243,0.0419,0.0082;SITEPOST=0.9989;SVTYPE=CNV	GT	1|1
16	75429831	EM_DL_DEL10401922	G	<CN0>	100	PASS	AC=2487;AF=0.496605;AFR_AF=0.3101;AMR_AF=0.6744;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.5456;END=75430673;EUR_AF=0.5716;MC=SI_BD_14786;NS=2504;SAS_AF=0.4949;SVTYPE=DEL	GT	1|1
16	76539138	UW_VH_1123	A	<CN0>	100	PASS	AC=2622;AF=0.523562;AFR_AF=0.1051;AMR_AF=0.5231;AN=5008;CIEND=0,526;CIPOS=-529,0;CS=DEL_union;EAS_AF=0.7728;END=76544021;EUR_AF=0.7237;MC=YL_CN_ACB_4011,EM_DL_DEL39908,UW_VH_11990,BI_GS_DEL1_B1_P2497_463,SI_BD_14795,UW_VH_5815;NS=2504;SAS_AF=0.6268;SVTYPE=DEL	GT	1|1
16	77090638	BI_GS_DEL1_B1_P2498_91	T	<CN0>	100	PASS	AC=735;AF=0.146765;AFR_AF=0.0545;AMR_AF=0.1643;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0992;END=77092862;EUR_AF=0.2276;MC=EM_DL_DEL39924,SI_BD_14802,YL_CN_JPT_3790,UW_VH_1605;NS=2504;SAS_AF=0.2249;SVTYPE=DEL	GT	1|0
16	78371604	UW_VH_21280	A	<CN0>	100	PASS	AC=1380;AF=0.275559;AFR_AF=0.3011;AMR_AF=0.3343;AN=5008;CIEND=0,417;CIPOS=-276,0;CS=DEL_union;EAS_AF=0.0129;END=78384909;EUR_AF=0.4771;MC=YL_CN_PUR_4266,UW_VH_2164,UW_VH_11095,BI_GS_DEL1_B2_P2499_303,EM_DL_DEL39950;NS=2504;SAS_AF=0.2628;SVTYPE=DEL	GT	1|0
16	78757451	DEL_pindel_44497	CTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	C	.	PASS	AC=1500;AF=0.299521;AFR_AF=0.3525;AMR_AF=0.2997;AN=5008;CS=DEL_pindel;EAS_AF=0.253;END=78757506;EUR_AF=0.3072;NS=2504;SAS_AF=0.2679;SITEPOST=0.9984;SVTYPE=DEL	GT	0|1
16	78876665	BI_GS_DEL1_B4_P2499_184	T	<CN0>	100	PASS	AC=282;AF=0.0563099;AFR_AF=0.0061;AMR_AF=0.0692;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0456;END=78877564;EUR_AF=0.0885;MC=UW_VH_2768,UW_VH_5293;NS=2504;SAS_AF=0.093;SVTYPE=DEL	GT	0|1
16	80196900	DEL_pindel_44536	TGATAGCAGTTGACTTAAAGAGGAGAATGAAAGAAATTAGAAAAGAGAAAAACCAGCCAATGGTAAAGTGGTTCCTATGCTATTTAAAATAATATTAAATAAA	T	.	PASS	AC=1623;AF=0.324081;AFR_AF=0.32;AMR_AF=0.2334;AN=5008;CS=DEL_pindel;EAS_AF=0.3234;END=80197002;EUR_AF=0.4245;NS=2504;SAS_AF=0.2914;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
16	81619267	DEL_pindel_44557	ACACCGCATGGCACAGTACCTTTTGGCCAGTCCACTTCCCTGGACCTTAGAAATTCCTTTGCATCTGCTGGAGGATTGGGCTGGAGAAGAACCC	A	.	PASS	AC=323;AF=0.0644968;AFR_AF=0.0272;AMR_AF=0.0778;AN=5008;CS=DEL_pindel;EAS_AF=0.0942;END=81619360;EUR_AF=0.0805;NS=2504;SAS_AF=0.0583;SITEPOST=0.9995;SVTYPE=DEL	GT	0|1
16	82164197	BI_GS_DEL1_B3_P2503_8	A	<CN0>	100	PASS	AC=3802;AF=0.759185;AFR_AF=0.9448;AMR_AF=0.5793;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5506;END=82164444;EUR_AF=0.834;NS=2504;SAS_AF=0.774;SVTYPE=DEL	GT	1|1
16	82164690	ALU_umary_ALU_11151	G	<INS:ME:ALU>	.	.	AC=2517;AF=0.502596;AFR_AF=0.6188;AMR_AF=0.3804;AN=5008;CS=ALU_umary;EAS_AF=0.3522;EUR_AF=0.5636;MEINFO=AluUndef,12,281,-;NS=2504;SAS_AF=0.5245;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AAGAATGGACATATG	GT	1|0
16	84501432	UW_VH_15670	G	<CN0>	100	PASS	AC=1154;AF=0.230431;AFR_AF=0.3775;AMR_AF=0.2147;AN=5008;CIEND=0,393;CIPOS=-381,0;CS=DEL_union;EAS_AF=0.0794;END=84504122;EUR_AF=0.2117;MC=EM_DL_DEL40074,UW_VH_2628,UW_VH_16720,YL_CN_GBR_3546,YL_CN_GWD_4855,YL_CN_ITU_3532,BI_GS_DEL1_B1_P2505_436,UW_VH_4499;NS=2504;SAS_AF=0.2178;SVTYPE=DEL	GT	1|0
16	85149501	UW_VH_55	C	<CN0>	100	PASS	AC=2576;AF=0.514377;AFR_AF=0.6687;AMR_AF=0.6455;AN=5008;CIEND=0,600;CIPOS=-576,0;CS=DEL_union;EAS_AF=0.2738;END=85150074;EUR_AF=0.6024;MC=BI_GS_DEL1_B3_P2506_8,UW_VH_9258,SI_BD_14879;NS=2504;SAS_AF=0.3701;SVTYPE=DEL	GT	1|1
16	85188639	INV_delly_INV00040664	C	<INV>	.	PASS	AC=2745;AF=0.548123;AFR_AF=0.4735;AMR_AF=0.5937;AN=5008;CIEND=-223,223;CIPOS=-223,223;CS=INV_delly;EAS_AF=0.5665;END=85189823;EUR_AF=0.6282;IMPRECISE;NS=2504;SAS_AF=0.5153;SITEPOST=1;SVTYPE=INV	GT	1|1
16	86284308	DEL_pindel_44702	ACTCCTGAATTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	.	PASS	AC=3278;AF=0.654553;AFR_AF=0.6256;AMR_AF=0.6268;AN=5008;CS=DEL_pindel;EAS_AF=0.7262;END=86284616;EUR_AF=0.6889;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.6043;SITEPOST=0.9948;SVTYPE=DEL_ALU	GT	1|1
16	87981799	DEL_pindel_44757	CAGGCTCAGCGTTCCAGCATTCCACTCGGCCTCCTGGGCTTTTCCTGGGCCACCG	C	.	PASS	AC=2388;AF=0.476837;AFR_AF=0.5756;AMR_AF=0.4856;AN=5008;CS=DEL_pindel;EAS_AF=0.245;END=87981853;EUR_AF=0.6074;NS=2504;SAS_AF=0.4417;SITEPOST=0.9999;SVTYPE=DEL	GT	1|0
16	88112672	BI_GS_DEL1_B5_P2509_98	G	<CN0>	100	PASS	AC=1428;AF=0.285144;AFR_AF=0.1762;AMR_AF=0.4006;AN=5008;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0.4474;END=88115662;EUR_AF=0.2227;MC=SI_BD_14912,YL_CN_MSL_3316,UW_VH_1607,EM_DL_DEL40158;NS=2504;SAS_AF=0.2474;SVTYPE=DEL	GT	0|1
16	88862644	BI_GS_DEL1_B1_P2509_470	A	<CN0>	100	PASS	AC=1302;AF=0.259984;AFR_AF=0.0318;AMR_AF=0.2421;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5665;END=88863596;EUR_AF=0.2425;MC=YL_CN_PEL_3266;NS=2504;SAS_AF=0.2832;SVTYPE=DEL	GT	1|0
16	89291389	ALU_umary_ALU_11172	G	<INS:ME:ALU>	.	.	AC=1818;AF=0.363019;AFR_AF=0.2678;AMR_AF=0.4294;AN=5008;CS=ALU_umary;EAS_AF=0.3819;EUR_AF=0.4274;MEINFO=AluYa4_2,1,281,+;NS=2504;SAS_AF=0.3589;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGATGCATTCTGG	GT	0|1
16	89896054	UW_VH_13891	A	<CN0>	100	PASS	AC=87;AF=0.0173722;AFR_AF=0.003;AMR_AF=0.0144;AN=5008;CIEND=0,330;CIPOS=-343,0;CS=DEL_union;EAS_AF=0;END=89898405;EUR_AF=0.0706;MC=YL_CN_CEU_4473,SI_BD_14946,BI_GS_DEL1_B1_P2510_572,UW_VH_1898,EM_DL_DEL40196;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	0|1
17	185812	DEL_pindel_44850	CAGGGCGACAGGGAGGAGATGGGGTTTAGAGGAGGGAAAAGAAGCTGGGACAAACATAAAAGA	C	.	PASS	AC=3708;AF=0.740415;AFR_AF=0.5734;AMR_AF=0.8055;AN=5008;CS=DEL_pindel;EAS_AF=0.7996;END=185874;EUR_AF=0.8012;NS=2504;SAS_AF=0.7965;SITEPOST=0.9994;SVTYPE=DEL	GT	1|1
17	548982	UW_VH_4724	C	<CN0>	100	PASS	AC=976;AF=0.194888;AFR_AF=0.0908;AMR_AF=0.353;AN=5008;CIEND=0,490;CIPOS=-290,0;CS=DEL_union;EAS_AF=0.2143;END=550033;EUR_AF=0.1988;MC=BI_GS_DEL1_B1_P2512_303;NS=2504;SAS_AF=0.1994;SVTYPE=DEL	GT	0|1
17	723720	BI_GS_DEL1_B1_P2512_435	T	<CN0>	100	PASS	AC=3369;AF=0.672724;AFR_AF=0.8404;AMR_AF=0.5951;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6687;END=724862;EUR_AF=0.5825;MC=YL_CN_PUR_4305,SI_BD_14995,UW_VH_14516,YL_CN_GBR_3565,YL_CN_STU_3590,YL_CN_ESN_3637,YL_CN_ITU_3550,YL_CN_PEL_3278,YL_CN_GWD_4879,YL_CN_TSI_3569,YL_CN_LWK_3442,YL_CN_CEU_4484,YL_CN_PJL_3709,UW_VH_18155,YL_CN_IBS_3271,UW_VH_22776,YL_CN_YRI_4547,UW_VH_4528,YL_CN_MSL_3323,YL_CN_JPT_3816;NS=2504;SAS_AF=0.5982;SVTYPE=DEL	GT	0|1
17	1097737	BI_GS_DEL1_B1_P2513_48	T	<CN0>	100	PASS	AC=1973;AF=0.39397;AFR_AF=0.1831;AMR_AF=0.5231;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.6419;END=1098192;EUR_AF=0.3598;MC=UW_VH_2629;NS=2504;SAS_AF=0.3671;SVTYPE=DEL	GT	1|1
17	1146295	BI_GS_DEL1_B1_P2513_74	C	<CN0>	100	PASS	AC=1201;AF=0.239816;AFR_AF=0.3782;AMR_AF=0.1931;AN=5008;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.1617;END=1147646;EUR_AF=0.2376;MC=EM_DL_DEL10411587,YL_CN_ACB_4048,UW_VH_3706;NS=2504;SAS_AF=0.1687;SVTYPE=DEL	GT	1|0
17	1602167	BI_GS_DEL1_B3_P2513_25	C	<CN0>	100	PASS	AC=721;AF=0.14397;AFR_AF=0.1415;AMR_AF=0.2003;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.2133;END=1602943;EUR_AF=0.0547;NS=2504;SAS_AF=0.1278;SVTYPE=DEL	GT	0|1
17	1654675	BI_GS_DEL1_B4_P2513_123	A	<CN0>	100	PASS	AC=1192;AF=0.238019;AFR_AF=0.031;AMR_AF=0.2118;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4812;END=1655405;EUR_AF=0.2823;MC=UW_VH_2131;NS=2504;SAS_AF=0.2403;SVTYPE=DEL	GT	0|1
17	1912668	BI_GS_DEL1_B2_P2513_505	C	<CN0>	100	PASS	AC=2122;AF=0.423722;AFR_AF=0.3949;AMR_AF=0.4063;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5367;END=1913537;EUR_AF=0.3151;MC=SI_BD_15030,UW_VH_1129,EM_DL_DEL10412036;NS=2504;SAS_AF=0.4703;SVTYPE=DEL	GT	0|1
17	2719916	UW_VH_25192	T	<CN0>	100	PASS	AC=1608;AF=0.321086;AFR_AF=0.233;AMR_AF=0.3026;AN=5008;CIEND=0,467;CIPOS=-280,0;CS=DEL_union;EAS_AF=0.3304;END=2721218;EUR_AF=0.4712;MC=UW_VH_1130,YL_CN_CEU_4497,BI_GS_DEL1_B5_P2514_640,YL_CN_ESN_3645,YL_CN_CDX_3105,EM_DL_DEL10412503,YL_CN_GIH_2799,YL_CN_PUR_4323,YL_CN_ASW_3657;NS=2504;SAS_AF=0.2894;SVTYPE=DEL	GT	1|0
17	3734770	BI_GS_DEL1_B5_P2515_664	G	<CN0>	100	PASS	AC=1941;AF=0.38758;AFR_AF=0.0794;AMR_AF=0.353;AN=5008;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.6032;END=3735834;EUR_AF=0.508;MC=UW_VH_1131,YL_CN_CHS_3749,SI_BD_15060,YL_CN_GIH_2801,YL_CN_GBR_3577,YL_CN_STU_3603;NS=2504;SAS_AF=0.4826;SVTYPE=DEL	GT	0|1
17	5464738	DEL_pindel_45020	GCCATGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCAGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=1920;AF=0.383387;AFR_AF=0.3986;AMR_AF=0.3963;AN=5008;CS=DEL_pindel;EAS_AF=0.2708;END=5465062;EUR_AF=0.4364;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.4151;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	0|1
17	6874732	DEL_pindel_45054	ATTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTCGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCCTGCAGTGAGCCGGGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAGG	A	.	PASS	AC=1815;AF=0.36242;AFR_AF=0.4319;AMR_AF=0.4798;AN=5008;CS=DEL_pindel;EAS_AF=0.2688;END=6875034;EUR_AF=0.3221;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.3231;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|0
17	7755714	DEL_pindel_45086	GCTGGGGCTTGGAGAGCCGCCAGCAGTGAGGGAAGGGGCTTGGGCCTAGGTGT	G	.	PASS	AC=476;AF=0.0950479;AFR_AF=0.0083;AMR_AF=0.1398;AN=5008;CS=DEL_pindel;EAS_AF=0.1409;END=7755766;EUR_AF=0.1024;NS=2504;SAS_AF=0.1258;SITEPOST=1;SVTYPE=DEL	GT	1|1
17	10006454	BI_GS_DEL1_B1_P2522_4	G	<CN0>	100	PASS	AC=9;AF=0.00179712;AFR_AF=0.0008;AMR_AF=0.0014;AN=5008;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0;END=10006923;EUR_AF=0.005;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	0|1
17	10203420	DEL_pindel_45151	CAAGATCCTGATTCAGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTCCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2392;AF=0.477636;AFR_AF=0.5219;AMR_AF=0.5403;AN=5008;CS=DEL_pindel;EAS_AF=0.3641;END=10203771;EUR_AF=0.5805;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3845;SITEPOST=0.9953;SVTYPE=DEL_ALU	GT	0|1
17	11430197	DEL_pindel_45188	CATATATATATATATATATATATATATATATATATATATATATATATATAT	C	.	PASS	AC=3633;AF=0.725439;AFR_AF=0.7315;AMR_AF=0.7435;AN=5008;CS=DEL_pindel;EAS_AF=0.756;END=11430247;EUR_AF=0.6809;NS=2504;SAS_AF=0.7188;SITEPOST=0.91285;SVTYPE=DEL	GT	0|1
17	11557370	DEL_pindel_45193	TAAAAGTTTAAAATCGATCTAGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1240;AF=0.247604;AFR_AF=0.2723;AMR_AF=0.1988;AN=5008;CS=DEL_pindel;EAS_AF=0.1885;END=11557691;EUR_AF=0.2833;MEINFO=AluYi,1,281,+;NS=2504;SAS_AF=0.273;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	0|1
17	12196579	DEL_pindel_45199	TAAACATACTTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAACAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCGGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAACAAAAAAAAA	T	.	PASS	AC=3636;AF=0.726038;AFR_AF=0.5908;AMR_AF=0.7421;AN=5008;CS=DEL_pindel;EAS_AF=0.7817;END=12196896;EUR_AF=0.7753;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7894;SITEPOST=0.9738;SVTYPE=DEL_ALU	GT	1|1
17	13220477	DEL_pindel_45214	AAAGGGTAAAGACAGAATCTTTTTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2425;AF=0.484225;AFR_AF=0.503;AMR_AF=0.5231;AN=5008;CS=DEL_pindel;EAS_AF=0.4286;END=13220804;EUR_AF=0.5099;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.4622;SITEPOST=0.9995;SVTYPE=DEL_ALU	GT	1|0
17	13531701	BI_GS_DEL1_B3_P2525_26	G	<CN0>	100	PASS	AC=754;AF=0.150559;AFR_AF=0.2663;AMR_AF=0.1124;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0665;END=13532712;EUR_AF=0.1451;MC=UW_VH_2262,UW_VH_21330,UW_VH_13812;NS=2504;SAS_AF=0.1135;SVTYPE=DEL	GT	0|1
17	14189910	BI_GS_DEL1_B2_P2526_123	T	<CN0>	100	PASS	AC=3118;AF=0.622604;AFR_AF=0.5053;AMR_AF=0.7522;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6677;END=14191557;EUR_AF=0.7505;MC=YL_CN_GBR_3588,YL_CN_ACB_4073,YL_CN_STU_3621,UW_VH_1139,YL_CN_MXL_3024,YL_CN_IBS_3293,SI_BD_15143,YL_CN_PUR_4357,YL_CN_PEL_3324,YL_CN_JPT_3844,EM_DL_DEL10417902,YL_CN_KHV_3801;NS=2504;SAS_AF=0.5112;SVTYPE=DEL	GT	1|1
17	15863568	DEL_pindel_45260	TAAAAAAAGGCACAAATTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2570;AF=0.513179;AFR_AF=0.4811;AMR_AF=0.5231;AN=5008;CS=DEL_pindel;EAS_AF=0.5218;END=15863886;EUR_AF=0.5268;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5266;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	1|0
17	16534216	SVA_umary_SVA_689	C	<INS:ME:SVA>	.	.	AC=96;AF=0.0191693;AFR_AF=0.0091;AMR_AF=0.0202;AN=5008;CS=SVA_umary;EAS_AF=0;EUR_AF=0.0596;MEINFO=SVA,684,1618,+;NS=2504;SAS_AF=0.0102;SITEPOST=1;SVLEN=934;SVTYPE=SVA;TSD=AAAAAATCTTTCTC	GT	1|0
17	16661446	DUP_gs_CNV_17_16661446_16704453	A	<CN0>,<CN2>	.	PASS	AC=0,1226;AF=0,0.244808;AFR_AF=0,0.1657;AMR_AF=0,0.3271;AN=5008;CS=DUP_gs;EAS_AF=0,0.0427;END=16704453;EUR_AF=0,0.4523;NS=2504;SAS_AF=0,0.2883;SITEPOST=1;SVTYPE=DUP	GT	0|2
17	16711552	DUP_gs_CNV_17_16711552_16724682	C	<CN0>,<CN2>	.	PASS	AC=1136,1065;AF=0.226837,0.21266;AFR_AF=0.3759,0.1241;AMR_AF=0.1268,0.2911;AN=5008;CS=DUP_gs;EAS_AF=0.2063,0.0397;END=16724682;EUR_AF=0.0577,0.4264;NS=2504;SAS_AF=0.2914,0.2352;SITEPOST=1;SVTYPE=CNV	GT	0|2
17	17230370	BI_GS_DEL1_B1_P2529_209	T	<CN0>	100	PASS	AC=2777;AF=0.554513;AFR_AF=0.441;AMR_AF=0.5389;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8016;END=17231247;EUR_AF=0.5199;MC=EM_DL_DEL10419131;NS=2504;SAS_AF=0.5;SVTYPE=DEL	GT	1|1
17	18359814	DUP_gs_CNV_17_18359814_18376676	A	<CN0>,<CN2>	.	PASS	AC=1023,990;AF=0.204273,0.197684;AFR_AF=0.1142,0.3442;AMR_AF=0.2983,0.1081;AN=5008;CS=DUP_gs;EAS_AF=0.0367,0.1925;END=18376676;EUR_AF=0.4235,0.0437;NS=2504;SAS_AF=0.2065,0.227;SITEPOST=0.9999;SVTYPE=CNV	GT	1|0
17	18418796	BI_GS_CNV_17_18418796_18465083	C	<CN0>	100	PASS	AC=1263;AF=0.252196;AFR_AF=0.1702;AMR_AF=0.3473;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.0446;END=18465083;EUR_AF=0.4583;NS=2504;SAS_AF=0.2975;SVTYPE=DEL	GT	1|0
17	18421015	SI_BD_15171	C	<CN0>	100	PASS	AC=1264;AF=0.252396;AFR_AF=0.174;AMR_AF=0.3473;AN=5008;CIEND=-50,136;CIPOS=-136,50;CS=DEL_union;EAS_AF=0.0437;END=18422388;EUR_AF=0.4553;MC=BI_GS_DEL1_B3_P2530_10;NS=2504;SAS_AF=0.2975;SVTYPE=DEL	GT	1|0
17	18507410	DUP_gs_CNV_17_18507410_18522042	A	<CN0>,<CN2>	.	PASS	AC=3,1928;AF=0.00059904,0.384984;AFR_AF=0,0.413;AMR_AF=0.0014,0.4107;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.3264;END=18522042;EUR_AF=0,0.4851;NS=2504;SAS_AF=0.001,0.2863;SITEPOST=0.9998;SVTYPE=CNV	GT	2|0
17	18729995	BI_GS_CNV_17_18729995_18745198	T	<CN0>	100	PASS	AC=1913;AF=0.381989;AFR_AF=0.4054;AMR_AF=0.4035;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.3284;END=18745198;EUR_AF=0.4791;NS=2504;SAS_AF=0.2904;SVTYPE=DEL	GT	1|0
17	26780360	BI_GS_DEL1_B2_P2538_587	G	<CN0>	100	PASS	AC=1312;AF=0.261981;AFR_AF=0.0802;AMR_AF=0.3228;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1062;END=26783483;EUR_AF=0.4642;MC=SI_BD_15206,EM_DL_DEL41431,YL_CN_MXL_3052;NS=2504;SAS_AF=0.4172;SVTYPE=DEL	GT	0|1
17	30852472	DUP_uwash_chr17_30852472_30872544	T	<CN0>	.	PASS	AC=2;AF=0.00039936;AFR_AF=0;AMR_AF=0;AN=5008;CS=DUP_uwash;EAS_AF=0.001;END=30872544;EUR_AF=0.001;NS=2504;SAS_AF=0;SITEPOST=1;SVTYPE=DEL	GT	0|1
17	32484889	DEL_pindel_45502	AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTCTGATCCTGGATTTGTCAGATGGAAGTACATTTGGGCAGTGTGTGTGTGTGTGTGTGTGTGT	A	.	PASS	AC=276;AF=0.0551118;AFR_AF=0.0446;AMR_AF=0.0793;AN=5008;CS=DEL_pindel;EAS_AF=0.0149;END=32485002;EUR_AF=0.1083;NS=2504;SAS_AF=0.0389;SITEPOST=0.9888;SVTYPE=DEL	GT	1|0
17	32872968	UW_VH_17996	T	<CN0>	100	PASS	AC=888;AF=0.177316;AFR_AF=0.0325;AMR_AF=0.2406;AN=5008;CIEND=0,458;CIPOS=-425,0;CS=DEL_union;EAS_AF=0.2123;END=32874613;EUR_AF=0.2515;MC=YL_CN_TSI_3631,UW_VH_7404,EM_DL_DEL10425642,UW_VH_5910,SI_BD_15244,BI_GS_DEL1_B1_P2544_947,YL_CN_STU_3654,YL_CN_GBR_3631,UW_VH_2546;NS=2504;SAS_AF=0.2157;SVTYPE=DEL	GT	0|1
17	34376278	DEL_pindel_45551	TAAAGAAAAACGCTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3814;AF=0.761581;AFR_AF=0.7277;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.7976;END=34376609;EUR_AF=0.7575;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7914;SITEPOST=0.96095;SVTYPE=DEL_ALU	GT	1|0
17	34436099	DUP_gs_CNV_17_34436099_34482872	T	<CN2>,<CN3>,<CN4>	.	PASS	AC=1015,159,28;AF=0.202676,0.0317492,0.00559105;AFR_AF=0.32,0.0711,0.0083;AMR_AF=0.1009,0.0216,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.1994,0.0169,0.005;END=34482872;EUR_AF=0.1421,0.0189,0.006;NS=2504;SAS_AF=0.182,0.0143,0.0031;SITEPOST=1;SVTYPE=CNV	GT	1|0
17	35143423	DEL_pindel_45558	TAAAGAAGTACACTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1696;AF=0.338658;AFR_AF=0.5083;AMR_AF=0.3718;AN=5008;CS=DEL_pindel;EAS_AF=0.2004;END=35143742;EUR_AF=0.2744;MEINFO=AluYa4_3,1,281,+;NS=2504;SAS_AF=0.2945;SITEPOST=0.99305;SVTYPE=DEL_ALU	GT	0|1
17	35755635	UW_VH_16727	T	<CN0>	100	PASS	AC=318;AF=0.0634984;AFR_AF=0.031;AMR_AF=0.072;AN=5008;CIEND=0,212;CIPOS=-260,0;CS=DEL_union;EAS_AF=0.0129;END=35760346;EUR_AF=0.1213;MC=BI_GS_DEL1_B3_P2547_28,YL_CN_YRI_4642;NS=2504;SAS_AF=0.0941;SVTYPE=DEL	GT	0|1
17	35755640	BI_GS_DEL1_B2_P2547_527	G	<CN0>	100	PASS	AC=925;AF=0.184704;AFR_AF=0.1142;AMR_AF=0.1988;AN=5008;CIEND=-16,16;CIPOS=-16,16;CS=DEL_union;EAS_AF=0.0327;END=35758781;EUR_AF=0.337;MC=YL_CN_ESN_3705,UW_VH_2423,EM_DL_DEL41824;NS=2504;SAS_AF=0.2699;SVTYPE=DEL	GT	1|1
17	36169343	ALU_umary_ALU_11305	T	<INS:ME:ALU>	.	.	AC=1702;AF=0.339856;AFR_AF=0.354;AMR_AF=0.3329;AN=5008;CS=ALU_umary;EAS_AF=0.374;EUR_AF=0.3449;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.2853;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGATATCTTCTTTT	GT	1|0
17	36963475	BI_GS_DEL1_B2_P2548_600	C	<CN0>	100	PASS	AC=1093;AF=0.218251;AFR_AF=0.1755;AMR_AF=0.2939;AN=5008;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.2183;END=36964937;EUR_AF=0.2266;MC=UW_VH_18165,UW_VH_4704,UW_VH_2440,YL_CN_STU_3674,UW_VH_11128,UW_VH_5250,EM_DL_DEL10427239,YL_CN_PJL_3840,YL_CN_YRI_4649,UW_VH_5984;NS=2504;SAS_AF=0.2137;SVTYPE=DEL	GT	0|1
17	39421554	YL_CN_GWD_4978	G	<CN0>	100	PASS	AC=3374;AF=0.673722;AFR_AF=0.4977;AMR_AF=0.8012;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.63;END=39432271;EUR_AF=0.7336;MC=EM_DL_DEL41994,UW_VH_10948,SI_BD_15289,BI_GS_DEL1_B4_P2551_83,UW_VH_1963;NS=2504;SAS_AF=0.8047;SVTYPE=DEL	GT	1|1
17	43576081	BI_GS_CNV_17_43576081_43589376	T	<CN0>	100	PASS	AC=436;AF=0.0870607;AFR_AF=0.0151;AMR_AF=0.1571;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.002;END=43589376;EUR_AF=0.2416;NS=2504;SAS_AF=0.0634;SVTYPE=DEL	GT	1|0
17	43647443	BI_GS_DEL1_B3_P2555_15	A	<CN0>	100	PASS	AC=413;AF=0.082468;AFR_AF=0.0159;AMR_AF=0.1427;AN=5008;CIEND=-36,36;CIPOS=-36,36;CS=DEL_union;EAS_AF=0.002;END=43649234;EUR_AF=0.2326;NS=2504;SAS_AF=0.0583;SVTYPE=DEL	GT	1|0
17	44086723	DEL_pindel_45688	TCATAGTTCTTAGGCAAATTGGTAAAAATCATTTCTCATCAAAACGCTGATATTTTCACACCTCCCTGGTGTCTGCAGAAAGAACCTTCCAGAAATGCAGTCGTGGGAGACCCATCCAGGCCACCCCTGCTTATGGAAGAGCTGAGAAAAAGCCCCACGGGAGCATTTGCTCAGCTTCCGTTACGCACCTAGTGGCATTGTGGGTGGGAGAGGGCTGGTGGGTGGATGGAAGGAGAAGG	T	.	PASS	AC=343;AF=0.0684904;AFR_AF=0.0129;AMR_AF=0.1225;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=44086961;EUR_AF=0.1879;NS=2504;SAS_AF=0.0521;SITEPOST=0.9986;SVTYPE=DEL	GT	1|0
17	44176394	DEL_pindel_45690	TAACAAATACAAGCGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCTCGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAACAAAACAAAAAAAA	T	.	PASS	AC=395;AF=0.0788738;AFR_AF=0.0151;AMR_AF=0.1455;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=44176717;EUR_AF=0.2157;MEINFO=AluYi,1,281,+;NS=2504;SAS_AF=0.0562;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|0
17	44223907	DEL_pindel_45694	CAAGAAGTTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAAGCCGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=412;AF=0.0822684;AFR_AF=0.0159;AMR_AF=0.1542;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=44224221;EUR_AF=0.2227;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0603;SITEPOST=1;SVTYPE=DEL_ALU	GT	1|0
17	44230893	DUP_gs_CNV_17_44230893_44262697	T	<CN2>,<CN3>	.	PASS	AC=1117,21;AF=0.223043,0.00419329;AFR_AF=0.0182,0;AMR_AF=0.2435,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.001,0;END=44262697;EUR_AF=0.4105,0.005;NS=2504;SAS_AF=0.5215,0.0133;SITEPOST=1;SVTYPE=CNV	GT	1|0
17	44341412	DUP_gs_CNV_17_44341412_44366497	G	<CN2>,<CN3>	.	PASS	AC=758,412;AF=0.151358,0.0822684;AFR_AF=0.0098,0.0106;AMR_AF=0.1009,0.1513;AN=5008;CS=DUP_gs;EAS_AF=0,0.001;END=44366497;EUR_AF=0.2038,0.2296;NS=2504;SAS_AF=0.4806,0.0624;SITEPOST=0.9997;SVTYPE=CNV	GT	2|0
17	45966643	ALU_umary_ALU_11332	T	<INS:ME:ALU>	.	.	AC=66;AF=0.0131789;AFR_AF=0.0098;AMR_AF=0.0274;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0239;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0092;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0|1
17	51957128	ALU_umary_ALU_11356	C	<INS:ME:ALU>	.	.	AC=1138;AF=0.227236;AFR_AF=0.2549;AMR_AF=0.2104;AN=5008;CS=ALU_umary;EAS_AF=0.1577;EUR_AF=0.2982;MEINFO=AluYa5,3,269,+;NS=2504;SAS_AF=0.2004;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=AGAAAACCCC	GT	0|1
17	52705176	DEL_pindel_45809	AAATCATCTGCTTGCAGTATATTTGCAGAAACCAAATAATCAAAGGGACTT	A	.	PASS	AC=1836;AF=0.366613;AFR_AF=0.5439;AMR_AF=0.3919;AN=5008;CS=DEL_pindel;EAS_AF=0.3899;END=52705226;EUR_AF=0.3082;NS=2504;SAS_AF=0.1452;SITEPOST=0.9999;SVTYPE=DEL	GT	1|0
17	54947583	ALU_umary_ALU_11371	A	<INS:ME:ALU>	.	.	AC=2044;AF=0.408147;AFR_AF=0.3495;AMR_AF=0.428;AN=5008;CS=ALU_umary;EAS_AF=0.5179;EUR_AF=0.4304;MEINFO=AluUndef,13,281,+;NS=2504;SAS_AF=0.3374;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAAATTAAGAAATGATTTGA	GT	0|1
17	55687808	BI_GS_DEL1_B1_P2567_687	G	<CN0>	100	PASS	AC=2635;AF=0.526158;AFR_AF=0.4259;AMR_AF=0.5605;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4494;END=55689918;EUR_AF=0.6272;MC=SI_BD_15373,EM_DL_DEL42546,UW_VH_12969,YL_CN_LWK_3539,UW_VH_22777,UW_VH_8377,UW_VH_4906,UW_VH_15418,YL_CN_GIH_2879,YL_CN_CDX_3187,UW_VH_1153,UW_VH_5270,UW_VH_18943,UW_VH_5233;NS=2504;SAS_AF=0.6125;SVTYPE=DEL	GT	1|0
17	56206964	DUP_gs_CNV_17_56206964_56213515	T	<CN0>,<CN2>	.	PASS	AC=153,5;AF=0.0305511,0.0009984;AFR_AF=0.0061,0;AMR_AF=0.0447,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.005;END=56213515;EUR_AF=0.0974,0;MC=BI_GS_DEL1_B1_P2568_176,YL_CN_CLM_3225,UW_VH_2264;NS=2504;SAS_AF=0.0164,0;SITEPOST=1;SVTYPE=CNV	GT	1|0
17	56210429	EM_DL_DEL10435213	G	<CN0>	100	PASS	AC=135;AF=0.0269569;AFR_AF=0.0053;AMR_AF=0.0331;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0;END=56211237;EUR_AF=0.0885;NS=2504;SAS_AF=0.0164;SVTYPE=DEL	GT	1|0
17	61565904	ALU_umary_ALU_11398	T	<INS:ME:ALU>	.	.	AC=1223;AF=0.244209;AFR_AF=0.1974;AMR_AF=0.2579;AN=5008;CS=ALU_umary;EAS_AF=0.2956;EUR_AF=0.2197;MEINFO=AluYa5b1,10,281,-;NS=2504;SAS_AF=0.2699;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=ATACAGTCACTTTT	GT	1|1
17	62213208	SI_BD_15405	C	<CN0>	100	PASS	AC=2896;AF=0.578275;AFR_AF=0.2481;AMR_AF=0.7767;AN=5008;CIEND=-53,204;CIPOS=-204,50;CS=DEL_union;EAS_AF=0.755;END=62214203;EUR_AF=0.6551;MC=YL_CN_STU_3729,BI_GS_DEL1_B1_P2574_184,YL_CN_ITU_3717,UW_VH_1612,YL_CN_PUR_4496,YL_CN_CHS_3883;NS=2504;SAS_AF=0.6227;SVTYPE=DEL	GT	0|1
17	65514573	DEL_pindel_46037	TTAAATAAATAATGGGGTTGAAATCTCTACCAGGGCTGTTTCAGTACTTATTTGGAAGAAGGATG	T	.	PASS	AC=146;AF=0.0291534;AFR_AF=0.003;AMR_AF=0.0519;AN=5008;CS=DEL_pindel;EAS_AF=0;END=65514637;EUR_AF=0.0755;NS=2504;SAS_AF=0.0307;SITEPOST=0.9991;SVTYPE=DEL	GT	1|0
17	65520854	DEL_pindel_46038	TGAAGGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3930;AF=0.784744;AFR_AF=0.8048;AMR_AF=0.8112;AN=5008;CS=DEL_pindel;EAS_AF=0.7748;END=65521184;EUR_AF=0.7575;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7771;SITEPOST=0.9925;SVTYPE=DEL_ALU	GT	1|1
17	65727354	DEL_pindel_46044	TTCGTGCACAAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGACTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCGCTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAG	T	.	PASS	AC=2954;AF=0.589856;AFR_AF=0.5582;AMR_AF=0.5951;AN=5008;CS=DEL_pindel;EAS_AF=0.623;END=65727630;EUR_AF=0.5915;MEINFO=AluY,37,281,-;NS=2504;SAS_AF=0.593;SITEPOST=0.99285;SVTYPE=DEL_ALU	GT	1|1
17	72393115	DEL_pindel_46165	TCACCACATCTGGCTAATTTTTGTAGTTTTAGTAGCGATGGGGTTTCACCATGTTGGCCAGGCTGATCTCGAACTCCTGACCTCAGGTGACCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTCCAGGCATGAC	T	.	PASS	AC=3648;AF=0.728435;AFR_AF=0.4304;AMR_AF=0.8372;AN=5008;CS=DEL_pindel;EAS_AF=0.869;END=72393249;EUR_AF=0.8539;NS=2504;SAS_AF=0.7802;SITEPOST=0.9991;SVTYPE=DEL	GT	1|1
17	74362239	UW_VH_1160	A	<CN0>	100	PASS	AC=900;AF=0.179712;AFR_AF=0.2844;AMR_AF=0.121;AN=5008;CIEND=0,479;CIPOS=-404,0;CS=DEL_union;EAS_AF=0.13;END=74365300;EUR_AF=0.0954;MC=BI_GS_DEL1_B1_P2586_246,YL_CN_CHB_3749,EM_DL_DEL43030;NS=2504;SAS_AF=0.2178;SVTYPE=DEL	GT	1|0
17	74987520	DEL_pindel_46220	AGGCGTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=4444;AF=0.88738;AFR_AF=0.8986;AMR_AF=0.8718;AN=5008;CS=DEL_pindel;EAS_AF=0.9425;END=74987839;EUR_AF=0.8648;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.8497;SITEPOST=0.99945;SVTYPE=DEL_ALU	GT	0|1
17	76282240	EM_DL_DEL10442986	G	<CN0>	100	PASS	AC=2400;AF=0.479233;AFR_AF=0.3956;AMR_AF=0.4481;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.6032;END=76283435;EUR_AF=0.5249;MC=YL_CN_GIH_2894,UW_VH_1162,YL_CN_KHV_3936,YL_CN_STU_3747,BI_GS_DEL1_B4_P2588_62,YL_CN_PUR_4515,SI_BD_15495,YL_CN_ITU_3730,UW_VH_11388,YL_CN_CEU_4662,YL_CN_CHS_3898;NS=2504;SAS_AF=0.4397;SVTYPE=DEL	GT	1|0
17	78056052	ALU_umary_ALU_11467	G	<INS:ME:ALU>	.	.	AC=2823;AF=0.563698;AFR_AF=0.5356;AMR_AF=0.5663;AN=5008;CS=ALU_umary;EAS_AF=0.6052;EUR_AF=0.5895;MEINFO=AluY,0,0,-;NS=2504;SAS_AF=0.5307;SITEPOST=1;SVLEN=0;SVTYPE=ALU;TSD=CAGGCGTG	GT	0|1
17	79577680	DEL_pindel_46359	TAAAATGACACAAACCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1805;AF=0.360423;AFR_AF=0.3245;AMR_AF=0.3646;AN=5008;CS=DEL_pindel;EAS_AF=0.2014;END=79578003;EUR_AF=0.5775;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3466;SITEPOST=0.9996;SVTYPE=DEL_ALU	GT	0|1
17	80185492	DEL_pindel_46373	GAGCACCACCTGCCCTGGGCGGGAGCACCACCTGCCCTGGGCGGGAGCACCACCTGCCCTGGGCGGGAGC	G	.	PASS	AC=3279;AF=0.654752;AFR_AF=0.4289;AMR_AF=0.7219;AN=5008;CS=DEL_pindel;EAS_AF=0.88;END=80185561;EUR_AF=0.6431;NS=2504;SAS_AF=0.6922;SITEPOST=0.98555;SVTYPE=DEL	GT	1|1
17	81025596	DEL_pindel_46381	CCTTGTGTCACACTCATCTTACACTGTGCTTTATCTTGTTACCCTGCAGGCATTCACCTCAACCCCTCCCGTCCCCTCTGGGATGAG	C	.	PASS	AC=2369;AF=0.473043;AFR_AF=0.4826;AMR_AF=0.3646;AN=5008;CS=DEL_pindel;EAS_AF=0.626;END=81025682;EUR_AF=0.4165;NS=2504;SAS_AF=0.4376;SITEPOST=0.99115;SVTYPE=DEL	GT	0|1
18	207028	BI_GS_DEL1_B5_P2594_125	A	<CN0>	100	PASS	AC=640;AF=0.127796;AFR_AF=0.0764;AMR_AF=0.1282;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.006;END=207707;EUR_AF=0.2107;MC=SI_BD_15588,UW_VH_2338,DEL_pindel_46392;NS=2504;SAS_AF=0.2372;SVTYPE=DEL	GT	0|1
18	853490	ALU_umary_ALU_11484	C	<INS:ME:ALU>	.	.	AC=750;AF=0.14976;AFR_AF=0.2239;AMR_AF=0.1441;AN=5008;CS=ALU_umary;EAS_AF=0.0903;EUR_AF=0.159;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.1053;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAATCATAC	GT	1|0
18	1235790	ALU_umary_ALU_11485	A	<INS:ME:ALU>	.	.	AC=2924;AF=0.583866;AFR_AF=0.2927;AMR_AF=0.7118;AN=5008;CS=ALU_umary;EAS_AF=0.6915;EUR_AF=0.7038;MEINFO=AluYc2,1,281,+;NS=2504;SAS_AF=0.6524;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAATAATTACA	GT	0|1
18	2472723	DEL_pindel_46439	GTCTCTTGCGTTTTTGGCTGTGAAAAGTGGAAGGGCCACATCTCTCTTTCTGGAAAAGGTTTAAAAAATGTGCTACAAAGGAATTATTTATTTGGGATTTTGGTCTTGTATGATA	G	.	PASS	AC=3830;AF=0.764776;AFR_AF=0.3396;AMR_AF=0.8415;AN=5008;CS=DEL_pindel;EAS_AF=0.872;END=2472837;EUR_AF=0.9841;NS=2504;SAS_AF=0.9489;SITEPOST=1;SVTYPE=DEL	GT	1|1
18	3997014	DEL_pindel_46471	TAAGTTGCAGAGTTTTCTTTTTTTTTTTTTTCATATTTTAAAATAAGCTTTATTTAGATTTTTTTTTAATATTTTATATTTGCATCCATGCCTTCGAGAAACCTTTCCCACGGGAAAGGTTATTTTCGTCTAATGTTACCCATAACTCATTCGCTATTTGACGTAGTTCTCTTAAATAAATCATCCTTTAGTAACTCTTAGAATTATCTCCTAATTTACAAAAACTGAAATGAAAAGGAACTACTAAATCATTAGCAGGAGTGGTTGCAATCTTATTTTCTTGTAAGTAAAGGGAAAATGATAAAAATCAACCAGAAAAGAAATTCATGGGCAAGAAAAGTATTTTCTAAAATCTGTCTCCGTAGAGAAAGATGCCAGCTTGGGTCGCTCCCCCTCACCCCTAGGCTCGGTTAAACAGTTTGGTCAAAGGAGGACAGAAAAGTCCTTATGAGGGCCTC	T	.	PASS	AC=1619;AF=0.323283;AFR_AF=0.354;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.3175;END=3997471;EUR_AF=0.2515;NS=2504;SAS_AF=0.3701;SITEPOST=0.9853;SVTYPE=DEL	GT	1|0
18	4955590	BI_GS_DEL1_B3_P2598_42	G	<CN0>	100	PASS	AC=1734;AF=0.346246;AFR_AF=0.1067;AMR_AF=0.4827;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.373;END=4955987;EUR_AF=0.5328;NS=2504;SAS_AF=0.3538;SVTYPE=DEL	GT	0|1
18	5209320	YL_CN_YRI_4753	G	<CN0>	100	PASS	AC=1445;AF=0.288538;AFR_AF=0.1543;AMR_AF=0.3314;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.6964;END=5210888;EUR_AF=0.0706;NS=2504;SAS_AF=0.2434;SVTYPE=DEL	GT	0|1
18	5209658	UW_VH_2265	A	<CN0>	100	PASS	AC=1444;AF=0.288339;AFR_AF=0.1536;AMR_AF=0.3314;AN=5008;CIEND=0,287;CIPOS=-417,0;CS=DEL_union;EAS_AF=0.6964;END=5210654;EUR_AF=0.0706;MC=BI_GS_DEL1_B1_P2599_199,UW_VH_6134,SI_BD_15634;NS=2504;SAS_AF=0.2434;SVTYPE=DEL	GT	0|1
18	5324643	EM_DL_DEL10449352	A	<CN0>	100	PASS	AC=2183;AF=0.435903;AFR_AF=0.3404;AMR_AF=0.464;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3036;END=5326242;EUR_AF=0.6213;MC=YL_CN_ACB_4229,YL_CN_PJL_3964,YL_CN_GBR_3744,YL_CN_YRI_4754,YL_CN_ESN_3785,YL_CN_CEU_4692,YL_CN_GWD_5058,YL_CN_IBS_3417,YL_CN_MXL_3161,YL_CN_JPT_3981;NS=2504;SAS_AF=0.4908;SVTYPE=DEL	GT	1|1
18	5325026	BI_GS_DEL1_B2_P2599_249	G	<CN0>	100	PASS	AC=2175;AF=0.434305;AFR_AF=0.3359;AMR_AF=0.4611;AN=5008;CIEND=-18,18;CIPOS=-18,18;CS=DEL_union;EAS_AF=0.3065;END=5325315;EUR_AF=0.6213;NS=2504;SAS_AF=0.4877;SVTYPE=DEL	GT	1|1
18	5457105	DEL_pindel_46506	AAAAACTGAAACCATAAGGCAAACCGCACTCTCAACATGGCTTCAAGATAGGTACAGCCTTTTCCTGTAAGCAACAACTCTACCGTTCTTTTATCTGTAGG	A	.	PASS	AC=1363;AF=0.272165;AFR_AF=0.1097;AMR_AF=0.3674;AN=5008;CS=DEL_pindel;EAS_AF=0.372;END=5457205;EUR_AF=0.3241;NS=2504;SAS_AF=0.2679;SITEPOST=0.9994;SVTYPE=DEL	GT	1|0
18	9225123	BI_GS_DEL1_B5_P2603_249	T	<CN0>	100	PASS	AC=3031;AF=0.605232;AFR_AF=0.3548;AMR_AF=0.7089;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6617;END=9225460;EUR_AF=0.6581;MC=UW_VH_1168;NS=2504;SAS_AF=0.7577;SVTYPE=DEL	GT	0|1
18	9287084	ALU_umary_ALU_11528	T	<INS:ME:ALU>	.	.	AC=220;AF=0.0439297;AFR_AF=0.0923;AMR_AF=0.036;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.0517;MEINFO=AluYb7_4,2,272,-;NS=2504;SAS_AF=0.0194;SITEPOST=1;SVLEN=270;SVTYPE=ALU;TSD=AATACTGTGTGTTTTTT	GT	1|0
18	9385391	DEL_pindel_46556	TAAAAGAAAGAACGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2004;AF=0.40016;AFR_AF=0.5401;AMR_AF=0.3905;AN=5008;CS=DEL_pindel;EAS_AF=0.252;END=9385715;EUR_AF=0.3966;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3742;SITEPOST=0.999;SVTYPE=DEL_ALU	GT	1|0
18	9621959	UW_VH_42	A	<CN0>	100	PASS	AC=4153;AF=0.829273;AFR_AF=0.8185;AMR_AF=0.7824;AN=5008;CIEND=0,637;CIPOS=-672,0;CS=DEL_union;EAS_AF=0.9663;END=9622233;EUR_AF=0.7097;NS=2504;SAS_AF=0.8589;SVTYPE=DEL	GT	1|1
18	10222279	BI_GS_DEL1_B2_P2604_203	A	<CN0>	100	PASS	AC=1984;AF=0.396166;AFR_AF=0.1293;AMR_AF=0.4207;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8879;END=10223606;EUR_AF=0.2505;MC=YL_CN_JPT_3987,UW_VH_2136,SI_BD_15664,YL_CN_CEU_4696;NS=2504;SAS_AF=0.3824;SVTYPE=DEL	GT	1|0
18	10331018	DEL_pindel_46577	CCATTCTAAACCCTTTCTTCATCCTGCGTTGAGTTCGAGTTTCAGTTAAACTTGTCATCTCCATCAAATCACCCGGGTAGGGCAGGAGGTCATTTTCTTTATCTATCGATCACTCTATCTATCTATCATCTCTCACCGTAG	C	.	PASS	AC=877;AF=0.17512;AFR_AF=0.093;AMR_AF=0.2104;AN=5008;CS=DEL_pindel;EAS_AF=0.2202;END=10331158;EUR_AF=0.2763;NS=2504;SAS_AF=0.1104;SITEPOST=0.9991;SVTYPE=DEL	GT	1|0
18	11509065	CINV_delly_INV00047622	A	<INV>	.	PASS	AC=1663;AF=0.332069;AFR_AF=0.388;AMR_AF=0.2925;AN=5008;CIEND=-268,268;CIPOS=-268,268;CS=CINV_delly;EAS_AF=0.4345;END=11511527;EUR_AF=0.2326;IMPRECISE;NS=2504;SAS_AF=0.2812;SVTYPE=INV	GT	1|0
18	11509705	EM_DL_DEL10452041	G	<CN0>	100	PASS	AC=2417;AF=0.482628;AFR_AF=0.6082;AMR_AF=0.4467;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.5853;END=11511474;EUR_AF=0.3002;MC=SI_BD_15669,YL_CN_GWD_5062,BI_GS_DEL1_B1_P2605_481,YL_CN_ITU_3754,YL_CN_MSL_3454,YL_CN_CHB_3784,YL_CN_FIN_3542,YL_CN_MXL_3165,UW_VH_1170,YL_CN_GIH_2917;NS=2504;SAS_AF=0.4202;SVTYPE=DEL	GT	1|0
18	12503560	BI_GS_DEL1_B5_P2606_440	T	<CN0>	100	PASS	AC=406;AF=0.0810703;AFR_AF=0.1649;AMR_AF=0.0706;AN=5008;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.001;END=12504493;EUR_AF=0.1133;MC=UW_VH_14208,BI_GS_DEL1_B5_P2606_441,UW_VH_2633;NS=2504;SAS_AF=0.0245;SVTYPE=DEL	GT	1|0
18	14803791	DUP_gs_CNV_18_14803791_14811140	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=214,137,6,1;AF=0.0427316,0.0273562,0.00119808,0.00019968;AFR_AF=0.0711,0.0613,0.0015,0;AMR_AF=0.0202,0.0101,0.0029,0;AN=5008;CS=DUP_gs;EAS_AF=0.0109,0.0268,0.001,0.001;END=14811140;EUR_AF=0.0318,0.001,0,0;NS=2504;SAS_AF=0.0644,0.0215,0.001,0;SITEPOST=0.99975;SVTYPE=CNV	GT	1|1
18	15095262	L1_umary_LINE1_2792	T	<INS:ME:LINE1>	.	.	AC=2621;AF=0.523363;AFR_AF=0.1596;AMR_AF=0.6643;AN=5008;CS=L1_umary;EAS_AF=0.6756;EUR_AF=0.666;MEINFO=LINE1,1,5991,-;NS=2504;SAS_AF=0.6115;SITEPOST=1;SVLEN=5990;SVTYPE=LINE1;TSD=GAGGACACTATTCTT	GT	1|1
18	24571615	BI_GS_DEL1_B3_P2618_26	A	<CN0>	100	PASS	AC=1734;AF=0.346246;AFR_AF=0.2148;AMR_AF=0.451;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4881;END=24572338;EUR_AF=0.4105;MC=DEL_pindel_46763,UW_VH_1910,SI_BD_15740;NS=2504;SAS_AF=0.2372;SVTYPE=DEL	GT	1|0
18	24791588	UW_VH_2339	C	<CN0>	100	PASS	AC=1364;AF=0.272364;AFR_AF=0.2126;AMR_AF=0.1225;AN=5008;CIEND=0,462;CIPOS=-508,0;CS=DEL_union;EAS_AF=0.4722;END=24791874;EUR_AF=0.164;MC=DEL_pindel_46770,BI_GS_DEL1_B4_P2618_181;NS=2504;SAS_AF=0.365;SVTYPE=DEL	GT	0|1
18	25851171	ALU_umary_ALU_11597	T	<INS:ME:ALU>	.	.	AC=568;AF=0.113419;AFR_AF=0.2231;AMR_AF=0.1225;AN=5008;CS=ALU_umary;EAS_AF=0.0149;EUR_AF=0.1113;MEINFO=AluYb8,1,268,-;NS=2504;SAS_AF=0.0624;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=null	GT	1|0
18	26363743	DEL_pindel_46789	CAAAAGAAAAGGCATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAGAAAAAAAAAA	C	.	PASS	AC=3763;AF=0.751398;AFR_AF=0.7027;AMR_AF=0.7608;AN=5008;CS=DEL_pindel;EAS_AF=0.7569;END=26364064;EUR_AF=0.8012;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7536;SITEPOST=0.9533;SVTYPE=DEL_ALU	GT	1|1
18	27629680	DEL_pindel_46816	CAAAAGTGAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGCCAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2729;AF=0.544928;AFR_AF=0.562;AMR_AF=0.5029;AN=5008;CS=DEL_pindel;EAS_AF=0.4881;END=27630006;EUR_AF=0.669;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4826;SITEPOST=0.9976;SVTYPE=DEL_ALU	GT	0|1
18	27800861	ALU_umary_ALU_11610	T	<INS:ME:ALU>	.	.	AC=2683;AF=0.535743;AFR_AF=0.5272;AMR_AF=0.5014;AN=5008;CS=ALU_umary;EAS_AF=0.4415;EUR_AF=0.6431;MEINFO=AluYb7_2,1,275,-;NS=2504;SAS_AF=0.5583;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=GGAAATAGGGTCTT	GT	1|0
18	27872570	DEL_pindel_46822	TAGAAATATATTTATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGGGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2582;AF=0.515575;AFR_AF=0.4697;AMR_AF=0.5403;AN=5008;CS=DEL_pindel;EAS_AF=0.619;END=27872899;EUR_AF=0.4682;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.502;SITEPOST=0.9801;SVTYPE=DEL_ALU	GT	1|0
18	31746705	DEL_pindel_46897	TAATAGTAAAAAAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGTGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1742;AF=0.347843;AFR_AF=0.32;AMR_AF=0.4251;AN=5008;CS=DEL_pindel;EAS_AF=0.3621;END=31747042;EUR_AF=0.3956;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2669;SITEPOST=0.99065;SVTYPE=DEL_ALU	GT	1|0
18	32530967	BI_GS_DEL1_B3_P2626_31	A	<CN0>	100	PASS	AC=3651;AF=0.729034;AFR_AF=0.4486;AMR_AF=0.781;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9812;END=32531232;EUR_AF=0.7654;NS=2504;SAS_AF=0.774;SVTYPE=DEL	GT	0|1
18	35306041	BI_GS_DEL1_B3_P2629_10	C	<CN0>	100	PASS	AC=2645;AF=0.528155;AFR_AF=0.2897;AMR_AF=0.5576;AN=5008;CIEND=-8,9;CIPOS=-8,9;CS=DEL_union;EAS_AF=0.7063;END=35306639;EUR_AF=0.662;MC=UW_VH_1182;NS=2504;SAS_AF=0.5082;SVTYPE=DEL	GT	0|1
18	35315621	DEL_pindel_46981	ACCTACTGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGGGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	A	.	PASS	AC=2763;AF=0.551717;AFR_AF=0.6036;AMR_AF=0.5245;AN=5008;CS=DEL_pindel;EAS_AF=0.5913;END=35315939;EUR_AF=0.5706;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.4407;SITEPOST=0.9937;SVTYPE=DEL_ALU	GT	0|1
18	36512546	ALU_umary_ALU_11637	A	<INS:ME:ALU>	.	.	AC=2440;AF=0.48722;AFR_AF=0.3971;AMR_AF=0.5692;AN=5008;CS=ALU_umary;EAS_AF=0.4593;EUR_AF=0.5388;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.5266;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGCAAATTTGA	GT	1|0
18	37061632	DEL_pindel_47020	TAAAGAATCAGATTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3078;AF=0.614617;AFR_AF=0.4516;AMR_AF=0.5461;AN=5008;CS=DEL_pindel;EAS_AF=0.62;END=37061962;EUR_AF=0.7694;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7188;SITEPOST=0.9929;SVTYPE=DEL_ALU	GT	0|1
18	38006382	UW_VH_1617	A	<CN0>	100	PASS	AC=1754;AF=0.35024;AFR_AF=0.205;AMR_AF=0.353;AN=5008;CIEND=0,500;CIPOS=-494,0;CS=DEL_union;EAS_AF=0.5446;END=38006996;EUR_AF=0.167;MC=BI_GS_DEL1_B1_P2632_10,SI_BD_15809,UW_VH_19594;NS=2504;SAS_AF=0.5327;SVTYPE=DEL	GT	1|1
18	38864885	YL_CN_CHS_3966	G	<CN0>	100	PASS	AC=4731;AF=0.944688;AFR_AF=0.8782;AMR_AF=0.9597;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9812;END=38868159;EUR_AF=0.9732;MC=YL_CN_JPT_4022,YL_CN_STU_3796,YL_CN_KHV_4024,YL_CN_TSI_3762,EM_DL_DEL44184,SI_BD_15814;NS=2504;SAS_AF=0.9571;SVTYPE=DEL	GT	1|1
18	43261003	DEL_pindel_47131	TCTGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCATTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=4187;AF=0.836062;AFR_AF=0.6868;AMR_AF=0.8703;AN=5008;CS=DEL_pindel;EAS_AF=0.9087;END=43261328;EUR_AF=0.8757;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.8978;SITEPOST=0.9919;SVTYPE=DEL_ALU	GT	0|1
18	44338417	DEL_pindel_47155	TCACAGGTAGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=2518;AF=0.502796;AFR_AF=0.5734;AMR_AF=0.5;AN=5008;CS=DEL_pindel;EAS_AF=0.5575;END=44338754;EUR_AF=0.4026;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.456;SITEPOST=0.9962;SVTYPE=DEL_ALU	GT	0|1
18	44715166	DEL_pindel_47163	TGAAATTTCAAAGCATCTTATTAAAGAGAAGATGCTGAAAGCTTCAAAGGGGGAAAAATGTTATCTATAAAGAAATAA	T	.	PASS	AC=1557;AF=0.310903;AFR_AF=0.2814;AMR_AF=0.3271;AN=5008;CS=DEL_pindel;EAS_AF=0.1855;END=44715243;EUR_AF=0.4394;NS=2504;SAS_AF=0.3364;SITEPOST=0.9995;SVTYPE=DEL	GT	1|0
18	45099894	DEL_pindel_47173	TAAAAAGTAGCTGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCTACACAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=458;AF=0.0914537;AFR_AF=0.115;AMR_AF=0.0476;AN=5008;CS=DEL_pindel;EAS_AF=0.0635;END=45100206;EUR_AF=0.1302;MEINFO=AluYg,1,281,+;NS=2504;SAS_AF=0.0798;SITEPOST=1;SVTYPE=DEL_ALU	GT	0|1
18	45996143	DEL_pindel_47192	TAGAAAATAGGTATCATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3474;AF=0.69369;AFR_AF=0.6687;AMR_AF=0.683;AN=5008;CS=DEL_pindel;EAS_AF=0.7351;END=45996460;EUR_AF=0.6879;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.6984;SITEPOST=0.9725;SVTYPE=DEL_ALU	GT	1|0
18	46159351	DEL_pindel_47195	TAGGGTTGCATACGGATGTGCACGAAGCCTCAGGGTCTGATTTGTGCGTGCCCATCAGGAGGCCCCATCCTGCCAAGGC	T	.	PASS	AC=3102;AF=0.619409;AFR_AF=0.2042;AMR_AF=0.7594;AN=5008;CS=DEL_pindel;EAS_AF=0.9335;END=46159429;EUR_AF=0.6789;NS=2504;SAS_AF=0.6963;SITEPOST=0.9994;SVTYPE=DEL	GT	1|0
18	47147440	ALU_umary_ALU_11686	C	<INS:ME:ALU>	.	.	AC=2147;AF=0.428714;AFR_AF=0.4312;AMR_AF=0.4121;AN=5008;CS=ALU_umary;EAS_AF=0.4415;EUR_AF=0.4205;MEINFO=AluUndef,26,277,-;NS=2504;SAS_AF=0.4325;SITEPOST=1;SVLEN=251;SVTYPE=ALU;TSD=null	GT	1|0
18	47694968	UW_VH_20493	A	<CN0>	100	PASS	AC=1812;AF=0.361821;AFR_AF=0.3775;AMR_AF=0.3876;AN=5008;CIEND=0,497;CIPOS=-428,0;CS=DEL_union;EAS_AF=0.3224;END=47698389;EUR_AF=0.327;MC=UW_VH_10297,UW_VH_2166,BI_GS_DEL1_B1_P2641_724,EM_DL_DEL44362,UW_VH_22778,UW_VH_21073,UW_VH_20755,UW_VH_3687,UW_VH_13893,UW_VH_17406,UW_VH_21718,YL_CN_TSI_3770,UW_VH_14603,UW_VH_4778,UW_VH_7825,UW_VH_6135;NS=2504;SAS_AF=0.3988;SVTYPE=DEL	GT	0|1
18	49444746	DEL_pindel_47274	TTTATTTAGTTTGAGTCCACTGAGGACAAACCGAAGGTAATTCTGACGGTTTCATAATTAACTTGATGGACCAGAAAACTGGTTAATTTGGAATCCCGAGTGACTCTATGTCTGAGAATAAGGATTAAATTTAACAGCTGGGACAAAATATGACTAA	T	.	PASS	AC=956;AF=0.190895;AFR_AF=0.1528;AMR_AF=0.1441;AN=5008;CS=DEL_pindel;EAS_AF=0.4315;END=49444902;EUR_AF=0.0845;NS=2504;SAS_AF=0.137;SITEPOST=1;SVTYPE=DEL	GT	1|0
18	49931730	ALU_umary_ALU_11703	T	<INS:ME:ALU>	.	.	AC=397;AF=0.0792732;AFR_AF=0.0514;AMR_AF=0.0749;AN=5008;CS=ALU_umary;EAS_AF=0.0615;EUR_AF=0.162;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.0532;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=null	GT	1|0
18	50462570	BI_GS_DEL1_B2_P2644_349	T	<CN0>	100	PASS	AC=1448;AF=0.289137;AFR_AF=0.2995;AMR_AF=0.2997;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2173;END=50463032;EUR_AF=0.4473;MC=DEL_pindel_47293,UW_VH_1190;NS=2504;SAS_AF=0.1789;SVTYPE=DEL	GT	1|0
18	50612385	BI_GS_DEL1_B4_P2644_147	T	<CN0>	100	PASS	AC=2964;AF=0.591853;AFR_AF=0.9039;AMR_AF=0.464;AN=5008;CIEND=-11,11;CIPOS=-11,11;CS=DEL_union;EAS_AF=0.4435;END=50612967;EUR_AF=0.6163;NS=2504;SAS_AF=0.3885;SVTYPE=DEL	GT	1|0
18	50925977	DEL_pindel_47302	CAAAGAAATCAGAGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=4134;AF=0.825479;AFR_AF=0.7526;AMR_AF=0.8055;AN=5008;CS=DEL_pindel;EAS_AF=0.869;END=50926300;EUR_AF=0.8718;MEINFO=AluYa5a1,1,281,+;NS=2504;SAS_AF=0.8456;SITEPOST=0.9906;SVTYPE=DEL_ALU	GT	1|1
18	50930750	DEL_pindel_47303	AAGCTTAATTTTGCTTCTTCAGGAAAAAAAAAAAAATAGAAGTCTAGCCCATATTAAGAAAT	A	.	PASS	AC=1354;AF=0.270367;AFR_AF=0.0756;AMR_AF=0.2651;AN=5008;CS=DEL_pindel;EAS_AF=0.4077;END=50930811;EUR_AF=0.2783;NS=2504;SAS_AF=0.3875;SITEPOST=0.9989;SVTYPE=DEL	GT	0|1
18	51952950	UW_VH_4750	G	<CN0>	100	PASS	AC=3785;AF=0.755791;AFR_AF=0.8729;AMR_AF=0.7392;AN=5008;CIEND=0,481;CIPOS=-446,0;CS=DEL_union;EAS_AF=0.7163;END=51956960;EUR_AF=0.67;MC=BI_GS_DEL1_B1_P2645_846;NS=2504;SAS_AF=0.7382;SVTYPE=DEL	GT	1|1
18	54706193	ALU_umary_ALU_11724	C	<INS:ME:ALU>	.	.	AC=1666;AF=0.332668;AFR_AF=0.2186;AMR_AF=0.3473;AN=5008;CS=ALU_umary;EAS_AF=0.37;EUR_AF=0.3767;MEINFO=AluYb11,1,259,+;NS=2504;SAS_AF=0.3926;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=AAGATAAACATTC	GT	1|0
18	54946735	BI_GS_DEL1_B1_P2648_853	T	<CN0>	100	PASS	AC=2908;AF=0.580671;AFR_AF=0.3101;AMR_AF=0.6369;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6339;END=54948718;EUR_AF=0.7475;MC=YL_CN_ITU_3786,UW_VH_1964,YL_CN_ESN_3835,YL_CN_PUR_4616,UW_VH_13722,UW_VH_18012,SI_BD_15894,EM_DL_DEL10468015;NS=2504;SAS_AF=0.68;SVTYPE=DEL	GT	1|1
18	55671122	DEL_pindel_47425	ACAAACATTATTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=3546;AF=0.708067;AFR_AF=0.6778;AMR_AF=0.7147;AN=5008;CS=DEL_pindel;EAS_AF=0.7302;END=55671428;EUR_AF=0.7266;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7025;SITEPOST=0.9629;SVTYPE=DEL_ALU	GT	1|1
18	57042133	DEL_pindel_47454	CGCCACTGCACTCCAGCCTGGGTGACAGACTGAGATTCGTCTCAAAAAAAAAA	C	.	PASS	AC=368;AF=0.0734824;AFR_AF=0.1944;AMR_AF=0.036;AN=5008;CS=DEL_pindel;EAS_AF=0;END=57042185;EUR_AF=0.0676;NS=2504;SAS_AF=0.0184;SITEPOST=0.9999;SVTYPE=DEL	GT	1|0
18	57258178	DEL_pindel_47461	TAAAAAGCTGCTAAGTAGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTGATGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGGGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCCGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2624;AF=0.523962;AFR_AF=0.6558;AMR_AF=0.4741;AN=5008;CS=DEL_pindel;EAS_AF=0.5903;END=57258516;EUR_AF=0.3847;MEINFO=AluYi,1,281,+;NS=2504;SAS_AF=0.456;SITEPOST=0.9946;SVTYPE=DEL_ALU	GT	0|1
18	57683363	ALU_umary_ALU_11739	T	<INS:ME:ALU>	.	.	AC=648;AF=0.129393;AFR_AF=0.1679;AMR_AF=0.1412;AN=5008;CS=ALU_umary;EAS_AF=0.0248;EUR_AF=0.1491;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.1564;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GCCAGCCATCTT	GT	0|1
18	59672757	UW_VH_1623	T	<CN0>	100	PASS	AC=872;AF=0.174121;AFR_AF=0.2716;AMR_AF=0.1369;AN=5008;CIEND=0,513;CIPOS=-435,0;CS=DEL_union;EAS_AF=0.0615;END=59674196;EUR_AF=0.2604;MC=SI_BD_15917,EM_DL_DEL10470201,BI_GS_DEL1_B5_P2653_910,YL_CN_TSI_3779;NS=2504;SAS_AF=0.0961;SVTYPE=DEL	GT	1|0
18	60686113	ALU_umary_ALU_11760	A	<INS:ME:ALU>	.	.	AC=652;AF=0.130192;AFR_AF=0.1967;AMR_AF=0.085;AN=5008;CS=ALU_umary;EAS_AF=0.0764;EUR_AF=0.1302;MEINFO=AluUndef,1,275,+;NS=2504;SAS_AF=0.1278;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAGAACAACACATA	GT	1|0
18	62996845	DEL_pindel_47576	AAAACATTAAATCTGAATGGCAATGCTATTTCACATCTTCTGTGGCTTTTCCACAAGTGGTGTGTAATTTATTTAGCTTTCT	A	.	PASS	AC=1327;AF=0.264976;AFR_AF=0.0961;AMR_AF=0.2536;AN=5008;CS=DEL_pindel;EAS_AF=0.4147;END=62996926;EUR_AF=0.3101;NS=2504;SAS_AF=0.3006;SITEPOST=1;SVTYPE=DEL	GT	1|0
18	63487287	ALU_umary_ALU_11774	C	<INS:ME:ALU>	.	.	AC=3117;AF=0.622404;AFR_AF=0.4788;AMR_AF=0.6571;AN=5008;CS=ALU_umary;EAS_AF=0.7173;EUR_AF=0.7038;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.6104;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAATCATCTGAGGC	GT	1|1
18	63533238	DEL_pindel_47592	TAAGAATGAAACTATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA	T	.	PASS	AC=2679;AF=0.534944;AFR_AF=0.4932;AMR_AF=0.5634;AN=5008;CS=DEL_pindel;EAS_AF=0.6002;END=63533582;EUR_AF=0.499;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5409;SITEPOST=0.97645;SVTYPE=DEL_ALU	GT	1|1
18	63723836	BI_GS_DEL1_B5_P2657_732	T	<CN0>	100	PASS	AC=1092;AF=0.218051;AFR_AF=0.121;AMR_AF=0.2392;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0962;END=63732368;EUR_AF=0.2654;MC=YL_CN_JPT_4045,EM_DL_DEL44934,UW_VH_13877,UW_VH_10927,UW_VH_17385,UW_VH_25237,UW_VH_23289,UW_VH_14708,SI_BD_15936,UW_VH_1196;NS=2504;SAS_AF=0.411;SVTYPE=DEL	GT	0|1
18	63766845	UW_VH_10151	A	<CN0>	100	PASS	AC=2628;AF=0.52476;AFR_AF=0.7451;AMR_AF=0.4697;AN=5008;CIEND=0,478;CIPOS=-448,0;CS=DEL_union;EAS_AF=0.5635;END=63769201;EUR_AF=0.3469;MC=UW_VH_19359,UW_VH_9260,YL_CN_PUR_4625,UW_VH_2548,UW_VH_5688,BI_GS_DEL1_B1_P2657_618,EM_DL_DEL44938,UW_VH_13468,UW_VH_14540,YL_CN_ACB_4299,YL_CN_CDX_3268,SI_BD_15938,YL_CN_ITU_3797,YL_CN_TSI_3787;NS=2504;SAS_AF=0.409;SVTYPE=DEL	GT	1|0
18	64542930	DEL_pindel_47625	TAACATATTATATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2085;AF=0.416334;AFR_AF=0.4206;AMR_AF=0.5202;AN=5008;CS=DEL_pindel;EAS_AF=0.4683;END=64543251;EUR_AF=0.333;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3691;SITEPOST=0.9944;SVTYPE=DEL_ALU	GT	1|0
18	66082127	DEL_pindel_47649	CGCCTGCCAGAAACTCTCATCTACATTCAGCAGAAAATGCATAAACTATCTCTGG	C	.	PASS	AC=94;AF=0.01877;AFR_AF=0.0015;AMR_AF=0.0086;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=66082181;EUR_AF=0.0636;NS=2504;SAS_AF=0.0204;SITEPOST=0.9954;SVTYPE=DEL	GT	0|1
18	66399175	ALU_umary_ALU_11790	T	<INS:ME:ALU>	.	.	AC=1503;AF=0.30012;AFR_AF=0.1316;AMR_AF=0.3141;AN=5008;CS=ALU_umary;EAS_AF=0.3423;EUR_AF=0.4016;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.3701;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAACTGAACACAT	GT	0|1
18	66572511	ALU_umary_ALU_11795	A	<INS:ME:ALU>	.	.	AC=2344;AF=0.468051;AFR_AF=0.4576;AMR_AF=0.4654;AN=5008;CS=ALU_umary;EAS_AF=0.4782;EUR_AF=0.4503;MEINFO=AluUndef,2,260,-;NS=2504;SAS_AF=0.4918;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=GAAATTATATATTTTTTA	GT	1|0
18	67160066	ALU_umary_ALU_11797	T	<INS:ME:ALU>	.	.	AC=967;AF=0.193091;AFR_AF=0.1399;AMR_AF=0.232;AN=5008;CS=ALU_umary;EAS_AF=0.0774;EUR_AF=0.3559;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1892;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGGTGGGCTTTTTT	GT	1|0
18	67949598	DEL_pindel_47697	TAAGAAATATTGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2381;AF=0.475439;AFR_AF=0.6354;AMR_AF=0.3963;AN=5008;CS=DEL_pindel;EAS_AF=0.4306;END=67949923;EUR_AF=0.4264;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.4121;SITEPOST=0.9978;SVTYPE=DEL_ALU	GT	1|0
18	68846724	DEL_pindel_47716	TAGAAAAATAGCAAGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3272;AF=0.653355;AFR_AF=0.6619;AMR_AF=0.67;AN=5008;CS=DEL_pindel;EAS_AF=0.6766;END=68847058;EUR_AF=0.6521;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6074;SITEPOST=0.9811;SVTYPE=DEL_ALU	GT	0|1
18	70353219	DEL_pindel_47759	GAAAAAGCAATTTGTGTTCAACTAAAATGAATCGCTTTTCTCATAAACATTTTATACTAACAGTAACTATATTTTGAAGTGTATCAGTTTCAACACATTTTCCAATATCTGTAGGTACTAAAACCTTAGTCTAATGTTAAATGGAGCTAATTAATGAACAATTCTTAAATACCTACATAATTTCCAACTAAACTAGGAAATTA	G	.	PASS	AC=897;AF=0.179113;AFR_AF=0.0234;AMR_AF=0.1816;AN=5008;CS=DEL_pindel;EAS_AF=0.2411;END=70353421;EUR_AF=0.2575;NS=2504;SAS_AF=0.2434;SITEPOST=0.9997;SVTYPE=DEL	GT	1|0
18	71444207	DEL_pindel_47769	TAGAAATTGATCCAACACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGCTCGCACCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1752;AF=0.34984;AFR_AF=0.1286;AMR_AF=0.4899;AN=5008;CS=DEL_pindel;EAS_AF=0.4216;END=71444542;EUR_AF=0.4543;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.3681;SITEPOST=0.9988;SVTYPE=DEL_ALU	GT	1|0
18	71456838	DEL_pindel_47772	TATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATAA	T	.	PASS	AC=563;AF=0.11242;AFR_AF=0.0643;AMR_AF=0.0865;AN=5008;CS=DEL_pindel;EAS_AF=0.1052;END=71456900;EUR_AF=0.1769;NS=2504;SAS_AF=0.137;SITEPOST=0.9966;SVTYPE=DEL	GT	0|1
18	72152428	DEL_pindel_47785	TTCCATGATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3400;AF=0.678914;AFR_AF=0.6944;AMR_AF=0.6787;AN=5008;CS=DEL_pindel;EAS_AF=0.75;END=72152768;EUR_AF=0.6173;MEINFO=AluYb8,1,281,-;NS=2504;SAS_AF=0.6483;SITEPOST=0.9789;SVTYPE=DEL_ALU	GT	1|1
18	72779980	DEL_pindel_47800	AGAAGATGGCTAAAAGTACGCACAGGGAAGGGGAGCAGGCACTGGTGGATG	A	.	PASS	AC=1696;AF=0.338658;AFR_AF=0.2231;AMR_AF=0.3314;AN=5008;CS=DEL_pindel;EAS_AF=0.371;END=72780030;EUR_AF=0.4046;NS=2504;SAS_AF=0.3988;SITEPOST=0.995;SVTYPE=DEL	GT	0|1
18	73570006	DEL_pindel_47810	TAAAGAATAACAGTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGAGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2043;AF=0.407947;AFR_AF=0.3858;AMR_AF=0.3444;AN=5008;CS=DEL_pindel;EAS_AF=0.3998;END=73570331;EUR_AF=0.4056;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4939;SITEPOST=0.9985;SVTYPE=DEL_ALU	GT	0|1
18	73901640	BI_GS_DEL1_B2_P2667_732	A	<CN0>	100	PASS	AC=1234;AF=0.246406;AFR_AF=0.034;AMR_AF=0.3948;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.371;END=73902034;EUR_AF=0.2097;MC=UW_VH_19595,UW_VH_1626;NS=2504;SAS_AF=0.3374;SVTYPE=DEL	GT	1|0
18	74347197	UW_VH_1203	A	<CN0>	100	PASS	AC=836;AF=0.166933;AFR_AF=0.0681;AMR_AF=0.1556;AN=5008;CIEND=0,519;CIPOS=-429,0;CS=DEL_union;EAS_AF=0.2589;END=74348009;EUR_AF=0.2296;MC=SI_BD_16012,UW_VH_19746,BI_GS_DEL1_B1_P2668_320;NS=2504;SAS_AF=0.1493;SVTYPE=DEL	GT	0|1
18	74365364	DEL_pindel_47837	GCTCTGATCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=1099;AF=0.219449;AFR_AF=0.1838;AMR_AF=0.2536;AN=5008;CS=DEL_pindel;EAS_AF=0.2679;END=74365670;EUR_AF=0.2694;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.1421;SITEPOST=0.9998;SVTYPE=DEL_ALU	GT	0|1
18	74638701	ALU_umary_ALU_11840	T	<INS:ME:ALU>	.	.	AC=2181;AF=0.435503;AFR_AF=0.4259;AMR_AF=0.3977;AN=5008;CS=ALU_umary;EAS_AF=0.4573;EUR_AF=0.4583;MEINFO=AluUndef,8,241,-;NS=2504;SAS_AF=0.4294;SITEPOST=1;SVLEN=233;SVTYPE=ALU;TSD=null	GT	1|0
18	74769770	DEL_pindel_47841	GGCGGGGAGTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTTTTAATAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTGTCGATCTCCTGACCTCGTGTTCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGA	G	.	PASS	AC=2978;AF=0.594649;AFR_AF=0.6725;AMR_AF=0.536;AN=5008;CS=DEL_pindel;EAS_AF=0.62;END=74770071;EUR_AF=0.5278;MEINFO=AluYa,17,281,-;NS=2504;SAS_AF=0.5736;SITEPOST=0.984;SVTYPE=DEL_ALU	GT	0|1
18	75266983	UW_VH_3430	A	<CN0>	100	PASS	AC=2868;AF=0.572684;AFR_AF=0.2769;AMR_AF=0.5173;AN=5008;CIEND=0,416;CIPOS=-476,0;CS=DEL_union;EAS_AF=0.881;END=75268167;EUR_AF=0.6213;MC=YL_CN_GWD_5147,EM_DL_DEL10476846,SI_BD_16025;NS=2504;SAS_AF=0.6442;SVTYPE=DEL	GT	0|1
18	75267029	BI_GS_DEL1_B4_P2669_58	A	<CN0>	100	PASS	AC=2860;AF=0.571086;AFR_AF=0.2761;AMR_AF=0.5173;AN=5008;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0.879;END=75267561;EUR_AF=0.6183;NS=2504;SAS_AF=0.6421;SVTYPE=DEL	GT	0|1
18	76662372	UW_VH_19078	C	<CN0>	100	PASS	AC=120;AF=0.0239617;AFR_AF=0.0015;AMR_AF=0.0562;AN=5008;CIEND=0,129;CIPOS=-204,0;CS=DEL_union;EAS_AF=0.0099;END=76666356;EUR_AF=0.0527;MC=YL_CN_IBS_3480,BI_GS_DEL1_B3_P2670_40,UW_VH_45;NS=2504;SAS_AF=0.0164;SVTYPE=DEL	GT	0|1
18	76664254	EM_DL_DEL10478364	C	<CN0>	100	PASS	AC=107;AF=0.0213658;AFR_AF=0.0045;AMR_AF=0.0476;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0089;END=76665058;EUR_AF=0.0447;NS=2504;SAS_AF=0.0143;SVTYPE=DEL	GT	0|1
18	77309946	BI_GS_DEL1_B1_P2671_226	C	<CN0>	100	PASS	AC=2706;AF=0.540335;AFR_AF=0.2995;AMR_AF=0.5403;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6716;END=77312089;EUR_AF=0.6392;NS=2504;SAS_AF=0.6288;SVTYPE=DEL	GT	1|0
19	393559	YL_CN_TSI_3819	G	<CN0>	100	PASS	AC=3319;AF=0.66274;AFR_AF=0.7746;AMR_AF=0.6138;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.6984;END=395010;EUR_AF=0.5278;NS=2504;SAS_AF=0.6483;SVTYPE=DEL	GT	0|1
19	565965	EM_DL_DEL45232	C	<CN0>	100	PASS	AC=1099;AF=0.219449;AFR_AF=0.2428;AMR_AF=0.111;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.1935;END=568163;EUR_AF=0.162;NS=2504;SAS_AF=0.3507;SVTYPE=DEL	GT	0|1
19	566005	YL_CN_GIH_2967	T	<CN0>	100	PASS	AC=1099;AF=0.219449;AFR_AF=0.2428;AMR_AF=0.111;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1935;END=569470;EUR_AF=0.162;MC=BI_GS_DEL1_B2_P2673_193,SI_BD_16105,UW_VH_46;NS=2504;SAS_AF=0.3507;SVTYPE=DEL	GT	0|1
19	2909164	YL_CN_BEB_3216	A	<CN0>	100	PASS	AC=3826;AF=0.763978;AFR_AF=0.6467;AMR_AF=0.8415;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7173;END=2910884;EUR_AF=0.8807;MC=YL_CN_CHS_4100,YL_CN_PUR_4779,BI_GS_DEL1_B2_P2675_564,YL_CN_PEL_3640,YL_CN_ACB_4379,YL_CN_KHV_4164,YL_CN_STU_3921,YL_CN_ITU_3893,YL_CN_TSI_3837,YL_CN_CEU_4810,YL_CN_ASW_3980,YL_CN_CHB_3925,YL_CN_FIN_3692,SI_BD_16155,YL_CN_PJL_4135,YL_CN_JPT_4135,YL_CN_CDX_3327;NS=2504;SAS_AF=0.7955;SVTYPE=DEL	GT	1|1
19	2909363	EM_DL_DEL10483187	C	<CN0>	100	PASS	AC=3824;AF=0.763578;AFR_AF=0.6467;AMR_AF=0.8415;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.7173;END=2910540;EUR_AF=0.8807;MC=BI_GS_DEL1_B2_P2675_564,YL_CN_CHB_3925;NS=2504;SAS_AF=0.7935;SVTYPE=DEL	GT	1|1
19	3711008	SI_BD_16171	A	<CN0>	100	PASS	AC=3879;AF=0.774561;AFR_AF=0.6399;AMR_AF=0.7896;AN=5008;CIEND=-50,185;CIPOS=-185,50;CS=DEL_union;EAS_AF=0.9931;END=3711333;EUR_AF=0.6899;MC=BI_GS_DEL1_B2_P2676_428;NS=2504;SAS_AF=0.8078;SVTYPE=DEL	GT	1|1
19	3715862	BI_GS_DEL1_B2_P2676_430	T	<CN0>	100	PASS	AC=260;AF=0.0519169;AFR_AF=0.0023;AMR_AF=0.0764;AN=5008;CIEND=-62,62;CIPOS=-62,62;CS=DEL_union;EAS_AF=0.0119;END=3717189;EUR_AF=0.0905;MC=UW_VH_1627;NS=2504;SAS_AF=0.1033;SVTYPE=DEL	GT	1|0
19	4217790	DUP_gs_CNV_19_4217790_4224498	G	<CN0>,<CN2>,<CN3>	.	PASS	AC=0,2,40;AF=0,0.00039936,0.00798722;AFR_AF=0,0,0.0015;AMR_AF=0,0.0014,0.013;AN=5008;CS=DUP_gs;EAS_AF=0,0,0;END=4224498;EUR_AF=0,0.001,0.0219;NS=2504;SAS_AF=0,0,0.0072;SITEPOST=0.9983;SVTYPE=CNV	GT	0|3
19	5509856	UW_VH_1205	C	<CN0>	100	PASS	AC=1544;AF=0.308307;AFR_AF=0.0968;AMR_AF=0.2061;AN=5008;CIEND=0,592;CIPOS=-464,0;CS=DEL_union;EAS_AF=0.4841;END=5510792;EUR_AF=0.337;MC=UW_VH_5109,UW_VH_3231,UW_VH_6070,UW_VH_13514,EM_DL_DEL10484837,BI_GS_DEL1_B2_P2678_330,YL_CN_PJL_4196;NS=2504;SAS_AF=0.456;SVTYPE=DEL	GT	0|1
19	12539909	DEL_pindel_48277	CAACAACATGCCTATAAGCACCACAAGATTTTTTTTTTTAATGAAGCAAAGGAAAAGAAGAACTAGCTTCCTATAGCTAAGCATCTGCAAATAAGACGGAACATTCAATGGTTTTTTCAGTAGGCAAAGGTGAAAAAGAGGTACGATCCTCAAAGATCCTACAGTGGAACAAAGCTTTCAATCCACCTGAGA	C	.	PASS	AC=1118;AF=0.223243;AFR_AF=0.2693;AMR_AF=0.1844;AN=5008;CS=DEL_pindel;EAS_AF=0.2063;END=12540100;EUR_AF=0.1561;NS=2504;SAS_AF=0.2751;SITEPOST=0.9992;SVTYPE=DEL	GT	0|1
19	12556643	BI_GS_DEL1_B4_P2685_68	C	<CN0>	100	PASS	AC=1406;AF=0.280751;AFR_AF=0.2436;AMR_AF=0.4308;AN=5008;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0.1071;END=12558236;EUR_AF=0.497;MC=YL_CN_BEB_3247,YL_CN_YRI_4926,UW_VH_1208,UW_VH_12145,YL_CN_FIN_3736,YL_CN_IBS_3584,YL_CN_ASW_4017,SI_BD_16311,YL_CN_GWD_5212,UW_VH_12879;NS=2504;SAS_AF=0.181;SVTYPE=DEL	GT	1|0
19	12694867	BI_GS_DEL1_B4_P2685_96	G	<CN0>	100	PASS	AC=2164;AF=0.432109;AFR_AF=0.3865;AMR_AF=0.5476;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1756;END=12698924;EUR_AF=0.6938;MC=EM_DL_DEL46077,UW_VH_1209,UW_VH_3043,UW_VH_5328,UW_VH_4500,YL_CN_CHS_4160,UW_VH_10472,SI_BD_16317;NS=2504;SAS_AF=0.407;SVTYPE=DEL	GT	1|1
19	15046391	BI_GS_DEL1_B1_P2688_43	A	<CN0>	100	PASS	AC=2662;AF=0.53155;AFR_AF=0.4614;AMR_AF=0.5519;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5367;END=15049476;EUR_AF=0.505;MC=UW_VH_21175,EM_DL_DEL46227,UW_VH_1630,UW_VH_25145,YL_CN_ACB_4459,UW_VH_12368;NS=2504;SAS_AF=0.6339;SVTYPE=DEL	GT	1|1
19	15927952	ALU_umary_ALU_11883	A	<INS:ME:ALU>	.	.	AC=2178;AF=0.434904;AFR_AF=0.4773;AMR_AF=0.415;AN=5008;CS=ALU_umary;EAS_AF=0.4921;EUR_AF=0.3827;MEINFO=AluYa5,1,276,+;NS=2504;SAS_AF=0.3865;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AAAAGAATGGAAAAGGA	GT	1|1
19	18566051	BI_GS_DEL1_B1_P2691_299	C	<CN0>	100	PASS	AC=18;AF=0.00359425;AFR_AF=0.0015;AMR_AF=0.0043;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=18566665;EUR_AF=0.007;NS=2504;SAS_AF=0.0061;SVTYPE=DEL	GT	0|1
19	21752923	DUP_gs_CNV_19_21752923_21756703	T	<CN2>,<CN3>	.	PASS	AC=1773,1;AF=0.354034,0.00019968;AFR_AF=0.3328,0;AMR_AF=0.4006,0;AN=5008;CS=DUP_gs;EAS_AF=0.4137,0.001;END=21756703;EUR_AF=0.333,0;NS=2504;SAS_AF=0.3098,0;SITEPOST=1;SVTYPE=CNV	GT	0|1
19	23320788	DEL_pindel_48512	TGAAAATGGCTTTCACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2720;AF=0.543131;AFR_AF=0.4274;AMR_AF=0.6095;AN=5008;CS=DEL_pindel;EAS_AF=0.6141;END=23321105;EUR_AF=0.5537;MEINFO=AluYa4_3,1,281,+;NS=2504;SAS_AF=0.5685;SITEPOST=0.9905;SVTYPE=DEL_ALU	GT	1|0
19	24011300	SVA_umary_SVA_746	T	<INS:ME:SVA>	.	.	AC=3850;AF=0.76877;AFR_AF=0.6959;AMR_AF=0.7608;AN=5008;CS=SVA_umary;EAS_AF=0.8353;EUR_AF=0.8141;MEINFO=SVA,288,1588,+;NS=2504;SAS_AF=0.7577;SITEPOST=0.9999;SVLEN=1300;SVTYPE=SVA;TSD=AAGTATTTCAACCTT	GT	1|1
19	27961358	EM_DL_DEL10494078	A	<CN0>	100	PASS	AC=3888;AF=0.776358;AFR_AF=0.7186;AMR_AF=0.8156;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.9365;END=27963241;EUR_AF=0.828;MC=YL_CN_STU_4064,YL_CN_GBR_3966,BI_GS_DEL1_B2_P2700_20,YL_CN_ESN_3956,YL_CN_GIH_3048,YL_CN_LWK_3739,YL_CN_CHB_4073;NS=2504;SAS_AF=0.6084;SVTYPE=DEL	GT	1|1
19	31287472	EM_DL_DEL48080	A	<CN0>	100	PASS	AC=2654;AF=0.529952;AFR_AF=0.4992;AMR_AF=0.5821;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.5317;END=31289746;EUR_AF=0.5378;MC=UW_VH_4877,UW_VH_6649,BI_GS_DEL1_B5_P2704_371,UW_VH_3183,UW_VH_18298,UW_VH_21094,UW_VH_18079,UW_VH_14517,UW_VH_11513,UW_VH_1215,YL_CN_CDX_3408,UW_VH_20649,UW_VH_14611,UW_VH_3899,UW_VH_7827,UW_VH_20442,UW_VH_15559,UW_VH_19521;NS=2504;SAS_AF=0.5245;SVTYPE=DEL	GT	1|0
19	31690684	ALU_umary_ALU_11924	A	<INS:ME:ALU>	.	.	AC=2047;AF=0.408746;AFR_AF=0.4788;AMR_AF=0.415;AN=5008;CS=ALU_umary;EAS_AF=0.3462;EUR_AF=0.3698;MEINFO=AluYb6_2,1,275,+;NS=2504;SAS_AF=0.4141;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AGAGAATTAAATGA	GT	1|0
19	35851718	DUP_gs_CNV_19_35851718_35863310	A	<CN0>,<CN2>	.	PASS	AC=631,14;AF=0.125998,0.00279553;AFR_AF=0.0136,0.0015;AMR_AF=0.1196,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.2014,0.006;END=35863310;EUR_AF=0.2425,0.001;MC=YL_CN_ASW_4087;NS=2504;SAS_AF=0.0849,0.002;SITEPOST=1;SVTYPE=CNV	GT	0|1
19	36662694	UW_VH_24943	G	<CN0>	100	PASS	AC=3059;AF=0.610823;AFR_AF=0.7897;AMR_AF=0.6239;AN=5008;CIEND=0,204;CIPOS=-354,0;CS=DEL_union;EAS_AF=0.6042;END=36662964;EUR_AF=0.5189;NS=2504;SAS_AF=0.4611;SVTYPE=DEL	GT	1|1
19	37046181	DEL_pindel_48688	AGCGATAAAGTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2533;AF=0.505791;AFR_AF=0.6316;AMR_AF=0.4049;AN=5008;CS=DEL_pindel;EAS_AF=0.376;END=37046497;EUR_AF=0.506;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5409;SITEPOST=0.9962;SVTYPE=DEL_ALU	GT	1|0
19	37284317	DEL_pindel_48692	TAAAAAGAGTAACTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	T	.	PASS	AC=3164;AF=0.631789;AFR_AF=0.6778;AMR_AF=0.6398;AN=5008;CS=DEL_pindel;EAS_AF=0.4871;END=37284627;EUR_AF=0.6809;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.6626;SITEPOST=0.9617;SVTYPE=DEL_ALU	GT	1|1
19	37463442	DEL_pindel_48697	GAGCAGAAATTAGTGACTTAAATGTTGAGATGCCAGAAGACCTGGACTGGGGCATGAATTCCCAGCCCA	G	.	PASS	AC=861;AF=0.171925;AFR_AF=0.264;AMR_AF=0.1311;AN=5008;CS=DEL_pindel;EAS_AF=0.125;END=37463510;EUR_AF=0.1322;NS=2504;SAS_AF=0.1656;SITEPOST=0.9981;SVTYPE=DEL	GT	1|0
19	38341368	UW_VH_25362	C	<CN0>	100	PASS	AC=144;AF=0.028754;AFR_AF=0.003;AMR_AF=0.0432;AN=5008;CIEND=0,75;CIPOS=-38,0;CS=DEL_union;EAS_AF=0;END=38345669;EUR_AF=0.0895;MC=BI_GS_DEL1_B1_P2711_250,EM_DL_DEL48358,SI_BD_16526,YL_CN_PUR_5018,UW_VH_3749;NS=2504;SAS_AF=0.0204;SVTYPE=DEL	GT	1|0
19	45444699	L1_umary_LINE1_2883	T	<INS:ME:LINE1>	.	.	AC=1146;AF=0.228834;AFR_AF=0.1831;AMR_AF=0.232;AN=5008;CS=L1_umary;EAS_AF=0.3383;EUR_AF=0.2117;MEINFO=LINE1,5465,6019,-;NS=2504;SAS_AF=0.1933;SITEPOST=1;SVLEN=554;SVTYPE=LINE1;TSD=TTT	GT	1|0
19	45473128	UW_VH_22751	A	<CN0>	100	PASS	AC=473;AF=0.0944489;AFR_AF=0.2262;AMR_AF=0.0447;AN=5008;CIEND=0,322;CIPOS=-294,0;CS=DEL_union;EAS_AF=0.0268;END=45474248;EUR_AF=0.0398;MC=UW_VH_4069,SI_BD_16591,BI_GS_DEL1_B4_P2718_69;NS=2504;SAS_AF=0.0777;SVTYPE=DEL	GT	1|0
19	46278623	BI_GS_DEL1_B2_P2719_138	C	<CN0>	100	PASS	AC=2590;AF=0.517173;AFR_AF=0.3396;AMR_AF=0.6398;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.629;END=46279603;EUR_AF=0.4672;MC=UW_VH_8828,YL_CN_PUR_5076,SI_BD_16599;NS=2504;SAS_AF=0.6063;SVTYPE=DEL	GT	0|1
19	47528255	BI_GS_DEL1_B1_P2720_346	A	<CN0>	100	PASS	AC=1266;AF=0.252796;AFR_AF=0.034;AMR_AF=0.4539;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4226;END=47528724;EUR_AF=0.2773;NS=2504;SAS_AF=0.2055;SVTYPE=DEL	GT	1|1
19	51406745	SI_BD_16673	C	<CN0>	100	PASS	AC=1419;AF=0.283347;AFR_AF=0.2088;AMR_AF=0.4193;AN=5008;CIEND=-50,272;CIPOS=-272,112;CS=DEL_union;EAS_AF=0.0575;END=51408334;EUR_AF=0.4861;MC=YL_CN_STU_4167,YL_CN_GBR_4033,YL_CN_PUR_5136,YL_CN_LWK_3791,UW_VH_1222,EM_DL_DEL10504134,YL_CN_IBS_3685,BI_GS_DEL1_B1_P2724_261,YL_CN_BEB_3335;NS=2504;SAS_AF=0.3119;SVTYPE=DEL	GT	1|1
19	51776390	DEL_pindel_49094	TAAGAATTACCACAACTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	T	.	PASS	AC=973;AF=0.194289;AFR_AF=0.357;AMR_AF=0.1643;AN=5008;CS=DEL_pindel;EAS_AF=0.0774;END=51776701;EUR_AF=0.2425;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0665;SITEPOST=0.9996;SVTYPE=DEL_ALU	GT	1|0
19	52134835	DUP_gs_CNV_19_52134835_52149093	T	<CN0>,<CN2>	.	PASS	AC=1664,183;AF=0.332268,0.0365415;AFR_AF=0.2821,0.0431;AMR_AF=0.1671,0.0375;AN=5008;CS=DUP_gs;EAS_AF=0.6498,0.0327;END=52149093;EUR_AF=0.1928,0.0179;MC=UW_VH_24562,UW_VH_21978,YL_CN_ACB_4596;NS=2504;SAS_AF=0.3333,0.0501;SITEPOST=1;SVTYPE=CNV	GT	1|0
19	52948969	DEL_pindel_49122	AATTTACTCTTGCAGTCATTCTGGAGCAAAAATTCATGATGCAGGACTCCACACACTACTGTCCATCTGAGTGGAAGCTGCAAGTTAGTCCTGCCCTGCCATCTGCC	A	.	PASS	AC=4165;AF=0.831669;AFR_AF=0.8517;AMR_AF=0.9049;AN=5008;CS=DEL_pindel;EAS_AF=0.6548;END=52949075;EUR_AF=0.9553;NS=2504;SAS_AF=0.8078;SITEPOST=1;SVTYPE=DEL	GT	1|1
19	53096015	BI_GS_DEL1_B1_P2726_60	G	<CN0>	100	PASS	AC=2085;AF=0.416334;AFR_AF=0.4713;AMR_AF=0.4784;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2728;END=53097618;EUR_AF=0.4165;MC=SI_BD_16684,YL_CN_CEU_4972,UW_VH_1223;NS=2504;SAS_AF=0.4458;SVTYPE=DEL	GT	0|1
19	53422195	SI_BD_16689	T	<CN0>	100	PASS	AC=3281;AF=0.655152;AFR_AF=0.587;AMR_AF=0.8012;AN=5008;CIEND=-50,318;CIPOS=-318,87;CS=DEL_union;EAS_AF=0.5446;END=53424196;EUR_AF=0.7624;MC=YL_CN_MXL_3388,YL_CN_GBR_4037,YL_CN_ACB_4606,YL_CN_STU_4177,YL_CN_GIH_3100,YL_CN_PUR_5146,YL_CN_TSI_3961,YL_CN_GWD_5343,YL_CN_JPT_4297,YL_CN_CHB_4171,YL_CN_MSL_3671,YL_CN_ITU_4242,YL_CN_BEB_3340,YL_CN_CHS_4283,BI_GS_DEL1_B1_P2726_282,YL_CN_ASW_4136,YL_CN_CEU_4974,YL_CN_ESN_4017,YL_CN_CDX_3465,YL_CN_LWK_3799,UW_VH_3230,YL_CN_KHV_4533,YL_CN_PJL_4556,UW_VH_3640,YL_CN_YRI_5081,YL_CN_IBS_3696;NS=2504;SAS_AF=0.6472;SVTYPE=DEL	GT	1|1
19	54555536	BI_GS_DEL1_B4_P2727_67	C	<CN0>	100	PASS	AC=1007;AF=0.201078;AFR_AF=0.205;AMR_AF=0.2291;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1111;END=54560655;EUR_AF=0.2346;MC=EM_DL_DEL49479,UW_VH_18339,UW_VH_1641,YL_CN_CDX_3475,UW_VH_5329,SI_BD_16709;NS=2504;SAS_AF=0.2342;SVTYPE=DEL	GT	0|1
19	55194225	DEL_pindel_49197	ATCTTCTAAGCTAAGCTAAGAAGATAGCTAAGCTTCTTCTAAGCTAAGCTAAGAAGATAGCTAAGCT	A	.	PASS	AC=777;AF=0.155152;AFR_AF=0.1089;AMR_AF=0.1513;AN=5008;CS=DEL_pindel;EAS_AF=0.1468;END=55194291;EUR_AF=0.1849;NS=2504;SAS_AF=0.1984;SITEPOST=0.999;SVTYPE=DEL	GT	1|0
19	55266365	DUP_gs_CNV_19_55266365_55280663	C	<CN0>,<CN2>	.	PASS	AC=735,35;AF=0.146765,0.00698882;AFR_AF=0.1354,0.0038;AMR_AF=0.1772,0.0058;AN=5008;CS=DUP_gs;EAS_AF=0.0903,0.003;END=55280663;EUR_AF=0.1551,0.008;MC=EM_DL_DEL49516;NS=2504;SAS_AF=0.1902,0.0153;SITEPOST=1;SVTYPE=CNV	GT	1|1
19	56041811	DEL_pindel_49223	AGGCCTAGTGTGACCTGTGAGGCCTGCGGGTTTAGTGTGGCCTAGGGTGACCCCGTGAGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGGGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGTGGCTTAGTGTGACCCGTGAGGCCTGTGGGTTTAGTGTGGCCTAGTGTGACCCGTGAGGCCTGTGGGTTTAGTGTGGCCTAGGGTGACCCCGTGAGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGGGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGTGGCTTAGTGTGACCCGTGAGGCCTGTGGGTTTAGTGT	A	.	PASS	AC=2273;AF=0.453874;AFR_AF=0.3759;AMR_AF=0.4827;AN=5008;CS=DEL_pindel;EAS_AF=0.4464;END=56042147;EUR_AF=0.497;NS=2504;SAS_AF=0.502;SITEPOST=0.99;SVTYPE=DEL	GT	0|1
19	56580958	DEL_pindel_49250	TGATACAGGGTAAAAACAAGCATAGGTCTATTGTAACTGCTCAGCTCTGCC	T	.	PASS	AC=1456;AF=0.290735;AFR_AF=0.4077;AMR_AF=0.33;AN=5008;CS=DEL_pindel;EAS_AF=0.247;END=56581008;EUR_AF=0.2485;NS=2504;SAS_AF=0.1933;SITEPOST=0.9994;SVTYPE=DEL	GT	1|0
19	56966061	ALU_umary_ALU_11995	C	<INS:ME:ALU>	.	.	AC=1135;AF=0.226637;AFR_AF=0.1929;AMR_AF=0.2378;AN=5008;CS=ALU_umary;EAS_AF=0.0992;EUR_AF=0.3539;MEINFO=AluYa4_3,1,281,-;NS=2504;SAS_AF=0.2648;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAATCAAATAAAAATGGATTAAAGAC	GT	1|1
19	57425532	ALU_umary_ALU_11999	G	<INS:ME:ALU>	.	.	AC=1070;AF=0.213658;AFR_AF=0.295;AMR_AF=0.1988;AN=5008;CS=ALU_umary;EAS_AF=0.1419;EUR_AF=0.2028;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.1994;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAGTCTTCATCCTCG	GT	1|1
19	57474871	SI_BD_16750	G	<CN0>	100	PASS	AC=2841;AF=0.567292;AFR_AF=0.3926;AMR_AF=0.5115;AN=5008;CIEND=-50,294;CIPOS=-294,105;CS=DEL_union;EAS_AF=0.7292;END=57475609;EUR_AF=0.5179;MC=DEL_pindel_49276;NS=2504;SAS_AF=0.727;SVTYPE=DEL	GT	1|0
20	594427	DEL_pindel_49336	TGTGTGCTGAGTCCAGCTCAAGTCCCTTGGTTCCCACTGCTGCTAAGCATGCACG	T	.	PASS	AC=1386;AF=0.276757;AFR_AF=0.3162;AMR_AF=0.2939;AN=5008;CS=DEL_pindel;EAS_AF=0.1647;END=594481;EUR_AF=0.3509;NS=2504;SAS_AF=0.2505;SITEPOST=0.9999;SVTYPE=DEL	GT	1|1
20	1389096	UW_VH_3735	G	<CN0>	100	PASS	AC=2647;AF=0.528554;AFR_AF=0.2685;AMR_AF=0.5922;AN=5008;CIEND=0,478;CIPOS=-443,0;CS=DEL_union;EAS_AF=0.7996;END=1390815;EUR_AF=0.5;MC=YL_CN_MSL_3707,YL_CN_BEB_3376,EM_DL_DEL10609080,YL_CN_ITU_4292,YL_CN_CLM_3524;NS=2504;SAS_AF=0.5849;SVTYPE=DEL	GT	1|1
20	1546228	ALU_umary_ALU_12014	G	<INS:ME:ALU>	.	.	AC=2031;AF=0.405551;AFR_AF=0.4637;AMR_AF=0.2882;AN=5008;CS=ALU_umary;EAS_AF=0.5615;EUR_AF=0.2475;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.4121;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAATGTTTCCTG	GT	0|1
20	1560739	YL_CN_CHB_4219	T	<CN0>	100	PASS	AC=4099;AF=0.81849;AFR_AF=0.9213;AMR_AF=0.6527;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7867;END=1593685;EUR_AF=0.7903;MC=UW_VH_14699,EM_DL_DEL57492,YL_CN_KHV_4589,UW_VH_14908,UW_VH_15575,BI_GS_DEL1_B1_P2734_555,UW_VH_5111,UW_VH_20808,UW_VH_13272,UW_VH_18673,UW_VH_5581,SI_BD_16781,UW_VH_21462,UW_VH_2780,UW_VH_25292,UW_VH_15103;NS=2504;SAS_AF=0.8589;SVTYPE=DEL	GT	1|1
20	1589901	BI_GS_CNV_20_1589901_1593853	C	<CN0>	100	PASS	AC=3791;AF=0.756989;AFR_AF=0.8691;AMR_AF=0.5879;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.7837;END=1593853;EUR_AF=0.6491;NS=2504;SAS_AF=0.8088;SVTYPE=DEL	GT	1|1
20	2359923	SI_BD_16789	A	<CN0>	100	PASS	AC=1633;AF=0.326078;AFR_AF=0.3253;AMR_AF=0.3401;AN=5008;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.2986;END=2360518;EUR_AF=0.3986;NS=2504;SAS_AF=0.271;SVTYPE=DEL	GT	0|1
20	3037866	DEL_pindel_49423	CAAAAATCAGCTGGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=3348;AF=0.66853;AFR_AF=0.7088;AMR_AF=0.6138;AN=5008;CS=DEL_pindel;EAS_AF=0.6806;END=3038182;EUR_AF=0.6292;MEINFO=AluYa5,5,281,+;NS=2504;SAS_AF=0.681;SITEPOST=0.94275;SVTYPE=DEL_ALU	GT	0|1
20	4082846	SVA_umary_SVA_777	A	<INS:ME:SVA>	.	.	AC=1448;AF=0.289137;AFR_AF=0.1036;AMR_AF=0.3646;AN=5008;CS=SVA_umary;EAS_AF=0.2907;EUR_AF=0.4404;MEINFO=SVA,1232,1625,+;NS=2504;SAS_AF=0.3292;SITEPOST=1;SVLEN=393;SVTYPE=SVA;TSD=AAGAAAATACAAATCA	GT	1|0
20	5268423	SVA_umary_SVA_779	T	<INS:ME:SVA>	.	.	AC=1888;AF=0.376997;AFR_AF=0.3495;AMR_AF=0.3156;AN=5008;CS=SVA_umary;EAS_AF=0.4762;EUR_AF=0.3708;MEINFO=SVA,79,1627,-;NS=2504;SAS_AF=0.362;SITEPOST=1;SVLEN=1548;SVTYPE=SVA;TSD=GACACTGGATTCTT	GT	0|1
20	5534545	DEL_pindel_49491	AGCTGCAGTTAAGGTATCCAGAAGGTCTTGCTAAGATCACTTAACAAAGTGGCTACATTGAACAACAGATTTTCTTTTCTTTTTTTTTAAGACAGAGTCTCGCTCTGTCACCCAGGCTGCAGTGCAGTGGTGTGATCTCTGCTCACTGCAAGCTCCGACTCCTCGGTTCAGGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTATTATTATTATTATTATTTTGTATTTTTAGTAGAGACGGGTTTTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGACCTTGTGATCCGCTCACCTCGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCCATCAG	A	.	PASS	AC=1402;AF=0.279952;AFR_AF=0.3321;AMR_AF=0.2046;AN=5008;CS=DEL_pindel;EAS_AF=0.3929;END=5534921;EUR_AF=0.2157;MEINFO=AluY,11,280,-;NS=2504;SAS_AF=0.2127;SITEPOST=1;SVTYPE=DEL_ALU	GT	0|1
20	5629054	BI_GS_DEL1_B2_P2738_430	G	<CN0>	100	PASS	AC=1083;AF=0.216254;AFR_AF=0.3215;AMR_AF=0.1888;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0893;END=5630397;EUR_AF=0.2535;MC=YL_CN_CHS_4338,YL_CN_CEU_5014,YL_CN_TSI_4002,YL_CN_YRI_5122,YL_CN_ESN_4056,UW_VH_1231,SI_BD_16816;NS=2504;SAS_AF=0.1861;SVTYPE=DEL	GT	1|1
20	6150945	DEL_pindel_49512	TAAGAGTGGACATCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTGAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3288;AF=0.65655;AFR_AF=0.7345;AMR_AF=0.6772;AN=5008;CS=DEL_pindel;EAS_AF=0.7153;END=6151277;EUR_AF=0.6113;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5225;SITEPOST=0.9926;SVTYPE=DEL_ALU	GT	1|1
20	7274336	DEL_pindel_49540	TGACAATACATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3697;AF=0.738219;AFR_AF=0.6362;AMR_AF=0.7651;AN=5008;CS=DEL_pindel;EAS_AF=0.7798;END=7274649;EUR_AF=0.7624;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7894;SITEPOST=0.9871;SVTYPE=DEL_ALU	GT	1|1
20	8816504	ALU_umary_ALU_12052	C	<INS:ME:ALU>	.	.	AC=1184;AF=0.236422;AFR_AF=0.0212;AMR_AF=0.3818;AN=5008;CS=ALU_umary;EAS_AF=0.4891;EUR_AF=0.2425;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1575;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAACTTAGTGAC	GT	0|1
20	9640983	ALU_umary_ALU_12058	T	<INS:ME:ALU>	.	.	AC=826;AF=0.164936;AFR_AF=0.0499;AMR_AF=0.1686;AN=5008;CS=ALU_umary;EAS_AF=0.3333;EUR_AF=0.1531;MEINFO=AluYa5a2,36,281,+;NS=2504;SAS_AF=0.1564;SITEPOST=1;SVLEN=245;SVTYPE=ALU;TSD=AAGATTATTTTAATTT	GT	1|0
20	9696761	DEL_pindel_49611	CAAAAGCATACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAAAAAA	C	.	PASS	AC=3088;AF=0.616613;AFR_AF=0.5552;AMR_AF=0.6239;AN=5008;CS=DEL_pindel;EAS_AF=0.6597;END=9696815;EUR_AF=0.5636;MEINFO=LINE1,6000,6019,+;NS=2504;SAS_AF=0.7045;SITEPOST=0.9881;SVTYPE=DEL_LINE1	GT	1|1
20	11517265	DEL_pindel_49654	TCAAATTCTGTCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCTCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATAGTGAAACCCCGTCTCTACTAAAATACAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAATCTCAGCTACTTGGGAGCCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGACCCAAGATCGCGCCATTGCACTCCAGCCTGGCAACAGAGCGAGACTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2776;AF=0.554313;AFR_AF=0.615;AMR_AF=0.4726;AN=5008;CS=DEL_pindel;EAS_AF=0.6369;END=11517588;EUR_AF=0.4911;MEINFO=AluSx,1,280,+;NS=2504;SAS_AF=0.5102;SITEPOST=0.999;SVTYPE=DEL_ALU	GT	0|1
20	14529068	DEL_pindel_49814	TAAAATACATTATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTTGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2986;AF=0.596246;AFR_AF=0.4516;AMR_AF=0.5994;AN=5008;CS=DEL_pindel;EAS_AF=0.7143;END=14529381;EUR_AF=0.5994;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6646;SITEPOST=0.9831;SVTYPE=DEL_ALU	GT	1|1
20	15711537	ALU_umary_ALU_12088	T	<INS:ME:ALU>	.	.	AC=498;AF=0.0994409;AFR_AF=0.09;AMR_AF=0.0908;AN=5008;CS=ALU_umary;EAS_AF=0.0595;EUR_AF=0.1759;MEINFO=AluUndef,28,276,-;NS=2504;SAS_AF=0.0808;SITEPOST=1;SVLEN=248;SVTYPE=ALU;TSD=null	GT	1|0
20	15711606	BI_GS_DEL1_B1_P2748_679	T	<CN0>	100	PASS	AC=3466;AF=0.692093;AFR_AF=0.6498;AMR_AF=0.745;AN=5008;CIEND=-59,59;CIPOS=-59,59;CS=DEL_union;EAS_AF=0.5159;END=15712437;EUR_AF=0.8429;MC=EM_DL_DEL10615111,YL_CN_ESN_4071;NS=2504;SAS_AF=0.7382;SVTYPE=DEL	GT	1|1
20	19061416	DEL_pindel_49990	TCCAGGGCCTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	.	PASS	AC=2508;AF=0.500799;AFR_AF=0.5144;AMR_AF=0.4683;AN=5008;CS=DEL_pindel;EAS_AF=0.3849;END=19061729;EUR_AF=0.5666;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.5573;SITEPOST=0.9949;SVTYPE=DEL_ALU	GT	0|1
20	21286088	EM_DL_DEL58037	T	<CN0>	100	PASS	AC=3568;AF=0.71246;AFR_AF=0.4932;AMR_AF=0.7565;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.8403;END=21288772;EUR_AF=0.6978;MC=SI_BD_16915,YL_CN_TSI_4021,BI_GS_DEL1_B1_P2754_267;NS=2504;SAS_AF=0.8609;SVTYPE=DEL	GT	1|1
20	22655322	DEL_pindel_50095	CAATATCCAGGAAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGTGGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAAGAGGCGGAGCTTGCAGTGAGCCGGGATAGCGCCACTGCAGTCCAGCTTGGGCGAAAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=1095;AF=0.21865;AFR_AF=0.2821;AMR_AF=0.1542;AN=5008;CS=DEL_pindel;EAS_AF=0.1419;END=22655650;EUR_AF=0.2594;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.2157;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	0|1
20	23103317	BI_GS_DEL1_B1_P2756_113	G	<CN0>	100	PASS	AC=4412;AF=0.88099;AFR_AF=0.8888;AMR_AF=0.8934;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9345;END=23103618;EUR_AF=0.8738;MC=SI_BD_16925,UW_VH_1238;NS=2504;SAS_AF=0.8139;SVTYPE=DEL	GT	1|0
20	24903696	BI_GS_DEL1_B2_P2757_793	A	<CN0>	100	PASS	AC=4098;AF=0.818291;AFR_AF=0.7595;AMR_AF=0.8156;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9345;END=24904414;EUR_AF=0.7783;MC=SI_BD_16940,UW_VH_1239;NS=2504;SAS_AF=0.8211;SVTYPE=DEL	GT	1|1
20	26092755	BI_GS_DEL1_B1_P2759_12	C	<CN0>	100	PASS	AC=852;AF=0.170128;AFR_AF=0.1354;AMR_AF=0.1239;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2788;END=26094314;EUR_AF=0.2127;MC=EM_DL_DEL10619725,SI_BD_16950,YL_CN_CEU_5032;NS=2504;SAS_AF=0.0941;SVTYPE=DEL	GT	0|1
20	26297587	EM_DL_DEL58265	A	<CN0>	100	PASS	AC=3479;AF=0.694688;AFR_AF=0.2519;AMR_AF=0.7133;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.9851;END=26302710;EUR_AF=0.836;MC=YL_CN_MXL_3438;NS=2504;SAS_AF=0.8354;SVTYPE=DEL	GT	1|1
20	30899227	DEL_pindel_50198	TAAAGAACAGCAACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4313;AF=0.861222;AFR_AF=0.8752;AMR_AF=0.8516;AN=5008;CS=DEL_pindel;EAS_AF=0.8482;END=30899532;EUR_AF=0.8608;MEINFO=AluY,19,281,+;NS=2504;SAS_AF=0.863;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	0|1
20	33115811	DEL_pindel_50252	TAAAAACTACCCTACTGGAGTAGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1857;AF=0.370807;AFR_AF=0.4153;AMR_AF=0.2752;AN=5008;CS=DEL_pindel;EAS_AF=0.3522;END=33116144;EUR_AF=0.4165;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3507;SITEPOST=0.9997;SVTYPE=DEL_ALU	GT	0|1
20	33241726	YL_CN_MSL_3741	A	<CN0>	100	PASS	AC=2039;AF=0.407149;AFR_AF=0.407;AMR_AF=0.6182;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4187;END=33244473;EUR_AF=0.4205;MC=BI_GS_DEL1_B1_P2766_183,YL_CN_ITU_4322,UW_VH_1923,YL_CN_JPT_4367,EM_DL_DEL58483,YL_CN_GWD_5441,SI_BD_16980;NS=2504;SAS_AF=0.2321;SVTYPE=DEL	GT	1|0
20	38337632	DEL_pindel_50373	TAAAAATATGACTCGAGAACCCGGGAAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2582;AF=0.515575;AFR_AF=0.5787;AMR_AF=0.4971;AN=5008;CS=DEL_pindel;EAS_AF=0.4474;END=38337769;EUR_AF=0.5348;MEINFO=AluYa8,196,282,+;NS=2504;SAS_AF=0.4939;SITEPOST=0.9969;SVTYPE=DEL_ALU	GT	0|1
20	42271862	EM_DL_DEL58706	A	<CN0>	100	PASS	AC=3815;AF=0.761781;AFR_AF=0.6573;AMR_AF=0.7997;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.7937;END=42274588;EUR_AF=0.8221;MC=YL_CN_TSI_4043,YL_CN_CDX_3532,YL_CN_ACB_4697,BI_GS_DEL1_B5_P2775_284,UW_VH_1648;NS=2504;SAS_AF=0.7812;SVTYPE=DEL	GT	1|1
20	42676125	DEL_pindel_50510	TTAACATCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=4890;AF=0.976438;AFR_AF=0.9887;AMR_AF=0.9712;AN=5008;CS=DEL_pindel;EAS_AF=0.9821;END=42676524;EUR_AF=0.9533;MEINFO=SVA_F,1317,1627,+;NS=2504;SAS_AF=0.9816;SITEPOST=1;SVTYPE=DEL_SVA	GT	1|1
20	44359412	DEL_pindel_50560	CTCACTGCAACCTCCGCTTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCCGGGATTACAGGCACGTGCCACCACACCCAGCTAATTTTTCTATTTTTAGTA	C	.	PASS	AC=2048;AF=0.408946;AFR_AF=0.2368;AMR_AF=0.611;AN=5008;CS=DEL_pindel;EAS_AF=0.4087;END=44359524;EUR_AF=0.5497;NS=2504;SAS_AF=0.3538;SITEPOST=0.9879;SVTYPE=DEL	GT	0|1
20	48543735	DEL_pindel_50691	CAAAGGTTGCAGTGAGCCGAGATGGTACCACTGCACTCCAGCCTGGGAACAAAGTGAGACTCCATCTCAAAAAAAAAAATA	C	.	PASS	AC=2414;AF=0.482029;AFR_AF=0.1309;AMR_AF=0.5793;AN=5008;CS=DEL_pindel;EAS_AF=0.754;END=48543815;EUR_AF=0.4414;NS=2504;SAS_AF=0.6493;SITEPOST=0.9997;SVTYPE=DEL	GT	1|1
20	52750565	DEL_pindel_50820	AGGAAGAGTGTTCTGGGTAAAGGACTCACAATTGGAAGAGTCCTCAGGCAG	A	.	PASS	AC=755;AF=0.150759;AFR_AF=0.2027;AMR_AF=0.1268;AN=5008;CS=DEL_pindel;EAS_AF=0.1944;END=52750615;EUR_AF=0.0924;NS=2504;SAS_AF=0.1125;SITEPOST=0.9996;SVTYPE=DEL	GT	0|1
20	53292651	DEL_pindel_50836	TTGATTCCTAATTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=2925;AF=0.584065;AFR_AF=0.382;AMR_AF=0.5346;AN=5008;CS=DEL_pindel;EAS_AF=0.7391;END=53292965;EUR_AF=0.6819;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6319;SITEPOST=0.9953;SVTYPE=DEL_ALU	GT	1|1
20	53761850	ALU_umary_ALU_12214	C	<INS:ME:ALU>	.	.	AC=3340;AF=0.666933;AFR_AF=0.5802;AMR_AF=0.6412;AN=5008;CS=ALU_umary;EAS_AF=0.7222;EUR_AF=0.7087;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.7025;SITEPOST=0.9999;SVLEN=280;SVTYPE=ALU;TSD=GAAAAATTTC	GT	1|1
20	54114280	L1_umary_LINE1_2942	G	<INS:ME:LINE1>	.	.	AC=144;AF=0.028754;AFR_AF=0.0446;AMR_AF=0.0303;AN=5008;CS=L1_umary;EAS_AF=0.0109;EUR_AF=0.0119;MEINFO=LINE1,4739,5980,-;NS=2504;SAS_AF=0.0419;SITEPOST=1;SVLEN=1241;SVTYPE=LINE1;TSD=null	GT	1|0
20	54434518	YL_CN_PEL_4029	T	<CN0>	100	PASS	AC=3601;AF=0.71905;AFR_AF=0.8313;AMR_AF=0.8357;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.5198;END=54440716;EUR_AF=0.7803;MEINFO=LINE1,5537,5600,+;NS=2504;SAS_AF=0.6268;SVTYPE=DEL_LINE1	GT	1|1
20	54463220	DEL_pindel_50884	GTGGGCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	.	PASS	AC=3042;AF=0.607428;AFR_AF=0.7133;AMR_AF=0.6744;AN=5008;CS=DEL_pindel;EAS_AF=0.4861;END=54463537;EUR_AF=0.6093;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.5399;SITEPOST=0.9913;SVTYPE=DEL_ALU	GT	0|1
20	55587403	BI_GS_DEL1_B5_P2788_626	T	<CN0>	100	PASS	AC=371;AF=0.0740815;AFR_AF=0.1172;AMR_AF=0.085;AN=5008;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0.0923;END=55587945;EUR_AF=0.0358;MC=UW_VH_2772,DEL_pindel_50908;NS=2504;SAS_AF=0.0286;SVTYPE=DEL	GT	1|1
20	57723444	DEL_pindel_50971	TAGAACAGAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=429;AF=0.0856629;AFR_AF=0.1679;AMR_AF=0.0605;AN=5008;CS=DEL_pindel;EAS_AF=0;END=57723778;EUR_AF=0.1193;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.046;SITEPOST=1;SVTYPE=DEL_ALU	GT	0|1
20	57785904	DEL_pindel_50975	CCAAATCCCCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAGAAAAAAAAAAAAAAAA	C	.	PASS	AC=1506;AF=0.300719;AFR_AF=0.4024;AMR_AF=0.2867;AN=5008;CS=DEL_pindel;EAS_AF=0.3571;END=57786120;EUR_AF=0.2117;MEINFO=AluYb,106,281,+;NS=2504;SAS_AF=0.2065;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	0|1
20	59804673	DEL_pindel_51045	GATATATATATATATATATATATATATATATATATATATATATATATATAT	G	.	PASS	AC=2332;AF=0.465655;AFR_AF=0.2995;AMR_AF=0.5562;AN=5008;CS=DEL_pindel;EAS_AF=0.4613;END=59804723;EUR_AF=0.5567;NS=2504;SAS_AF=0.5368;SITEPOST=0.9292;SVTYPE=DEL	GT	1|0
20	59974166	DEL_pindel_51052	AAAAACCCACTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=2140;AF=0.427316;AFR_AF=0.4644;AMR_AF=0.4914;AN=5008;CS=DEL_pindel;EAS_AF=0.4415;END=59974487;EUR_AF=0.3926;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.3528;SITEPOST=0.9989;SVTYPE=DEL_ALU	GT	1|0
20	61330155	DEL_pindel_51121	GGGGCTGGCCAGGGCCTCAAATGGTGTCCTCAGGAAGTCCAGGGGACAGCAGGGCTGGCCAGGGCCTCAAATGGTGTCCTCAGGAAGCCCAGGGGGCAGCA	G	.	PASS	AC=246;AF=0.0491214;AFR_AF=0.1051;AMR_AF=0.0317;AN=5008;CS=DEL_pindel;EAS_AF=0.0099;END=61330255;EUR_AF=0.0388;NS=2504;SAS_AF=0.0368;SITEPOST=0.98575;SVTYPE=DEL	GT	1|0
20	61724537	YL_CN_ESN_4121	G	<CN0>	100	PASS	AC=3802;AF=0.759185;AFR_AF=0.4236;AMR_AF=0.8184;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9911;END=61725820;EUR_AF=0.8072;MC=YL_CN_ITU_4354;NS=2504;SAS_AF=0.8824;SVTYPE=DEL	GT	1|1
20	61724701	BI_GS_DEL1_B1_P2794_457	T	<CN0>	100	PASS	AC=3803;AF=0.759385;AFR_AF=0.4251;AMR_AF=0.8156;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9921;END=61725601;EUR_AF=0.8072;MC=SI_BD_17202,EM_DL_DEL10633574;NS=2504;SAS_AF=0.8824;SVTYPE=DEL	GT	1|1
20	62267510	BI_GS_DEL1_B3_P2795_12	C	<CN0>	100	PASS	AC=1631;AF=0.325679;AFR_AF=0.2194;AMR_AF=0.4741;AN=5008;CIEND=-20,20;CIPOS=-20,20;CS=DEL_union;EAS_AF=0.1002;END=62268021;EUR_AF=0.6143;NS=2504;SAS_AF=0.2996;SVTYPE=DEL	GT	0|1
20	62392041	BI_GS_DEL1_B1_P2795_223	A	<CN0>	100	PASS	AC=130;AF=0.0259585;AFR_AF=0.0121;AMR_AF=0.0346;AN=5008;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.003;END=62392585;EUR_AF=0.0795;NS=2504;SAS_AF=0.0072;SVTYPE=DEL	GT	1|0
20	62767800	DEL_pindel_51195	TCCCCTGACCGATTTAGCCGTTATTGAGGGACATCGAGGTTGCTTGGTGTGGCGG	T	.	PASS	AC=1999;AF=0.399161;AFR_AF=0.2973;AMR_AF=0.4597;AN=5008;CS=DEL_pindel;EAS_AF=0.4931;END=62767854;EUR_AF=0.4185;NS=2504;SAS_AF=0.3773;SITEPOST=0.9982;SVTYPE=DEL	GT	0|1
21	10945865	DUP_gs_CNV_21_10945865_10990763	A	<CN2>,<CN3>	.	PASS	AC=4790,42;AF=0.95647,0.00838658;AFR_AF=0.9644,0.0023;AMR_AF=0.9222,0.0101;AN=5008;CS=DUP_gs;EAS_AF=0.9871,0.0109;END=10990763;EUR_AF=0.9205,0.0109;NS=2504;SAS_AF=0.9755,0.0102;SITEPOST=1;SVTYPE=CNV	GT	1|1
21	10992014	DUP_gs_CNV_21_10992014_10999734	A	<CN2>,<CN3>	.	PASS	AC=4809,23;AF=0.960264,0.00459265;AFR_AF=0.969,0.0015;AMR_AF=0.9294,0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.9831,0.005;END=10999734;EUR_AF=0.9254,0.002;NS=2504;SAS_AF=0.9826,0.0082;SITEPOST=0.9998;SVTYPE=CNV	GT	1|1
21	14415002	ALU_umary_ALU_12260	A	<INS:ME:ALU>	.	.	AC=2141;AF=0.427516;AFR_AF=0.5325;AMR_AF=0.3689;AN=5008;CS=ALU_umary;EAS_AF=0.4107;EUR_AF=0.3658;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.408;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0|1
21	14981354	BI_GS_CNV_21_14981354_15016529	T	<CN0>	100	PASS	AC=3443;AF=0.6875;AFR_AF=0.8782;AMR_AF=0.4755;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.8333;END=15016529;EUR_AF=0.5885;NS=2504;SAS_AF=0.5317;SVTYPE=DEL	GT	1|1
21	15244513	DUP_gs_CNV_21_15244513_15253042	T	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=215,817,84,14;AF=0.0429313,0.163139,0.0167732,0.00279553;AFR_AF=0.0734,0.0998,0.0015,0.0008;AMR_AF=0.0533,0.2061,0.0187,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.0089,0.0486,0.005,0;END=15253042;EUR_AF=0.0517,0.2376,0.0388,0.004;NS=2504;SAS_AF=0.0204,0.2597,0.0256,0.0061;SITEPOST=0.9981;SVTYPE=CNV	GT	2|0
21	15253724	DUP_gs_CNV_21_15253724_15259810	T	<CN0>,<CN2>	.	PASS	AC=216,719;AF=0.043131,0.14357;AFR_AF=0.0734,0.0469;AMR_AF=0.0519,0.196;AN=5008;CS=DUP_gs;EAS_AF=0.0079,0.0516;END=15259810;EUR_AF=0.0537,0.2455;NS=2504;SAS_AF=0.0215,0.227;SITEPOST=0.9998;SVTYPE=CNV	GT	0|2
21	15264074	DUP_gs_CNV_21_15264074_15272540	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=117,606,83,30;AF=0.0233626,0.121006,0.0165735,0.00599042;AFR_AF=0.0635,0.0408,0.003,0;AMR_AF=0.0072,0.1527,0.0447,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.0109,0.0397,0.0208,0.0218;END=15272540;EUR_AF=0.0129,0.2296,0.0089,0;NS=2504;SAS_AF=0.0041,0.1789,0.0184,0.0072;SITEPOST=0.996;SVTYPE=CNV	GT	2|0
21	15652867	ALU_umary_ALU_12269	G	<INS:ME:ALU>	.	.	AC=512;AF=0.102236;AFR_AF=0.118;AMR_AF=0.0778;AN=5008;CS=ALU_umary;EAS_AF=0.0397;EUR_AF=0.172;MEINFO=AluYa5,12,277,+;NS=2504;SAS_AF=0.091;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=AAAAAATGATTAGG	GT	1|0
21	16275282	DEL_pindel_51226	TTGCAGTGAGCCGAGATCGTGCCACTGCACGCCAGCCTGGGGACAGAGCAAGACGCTGTTTCAAAAAAAAAAAATAATAA	T	.	PASS	AC=2729;AF=0.544928;AFR_AF=0.708;AMR_AF=0.6282;AN=5008;CS=DEL_pindel;EAS_AF=0.3185;END=16275361;EUR_AF=0.5527;NS=2504;SAS_AF=0.4908;SITEPOST=0.9998;SVTYPE=DEL	GT	1|0
21	18612378	SI_BD_17271	C	<CN0>	100	PASS	AC=1921;AF=0.383586;AFR_AF=0.1051;AMR_AF=0.3905;AN=5008;CIEND=-85,272;CIPOS=-272,82;CS=DEL_union;EAS_AF=0.4028;END=18613698;EUR_AF=0.5427;MC=EM_DL_DEL10638162,YL_CN_ITU_4395;NS=2504;SAS_AF=0.5716;SVTYPE=DEL	GT	1|1
21	19326713	SI_BD_17275	A	<CN0>	100	PASS	AC=1292;AF=0.257987;AFR_AF=0.087;AMR_AF=0.2464;AN=5008;CIEND=-50,217;CIPOS=-217,50;CS=DEL_union;EAS_AF=0.2877;END=19329268;EUR_AF=0.2843;MC=EM_DL_DEL59865,UW_VH_2141,UW_VH_3874,YL_CN_KHV_4704,BI_GS_DEL1_B2_P2816_224,YL_CN_JPT_4446;NS=2504;SAS_AF=0.4397;SVTYPE=DEL	GT	0|1
21	22051926	DEL_pindel_51322	TTTTTGTTTTTTTTTGTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAG	T	.	PASS	AC=1669;AF=0.333267;AFR_AF=0.3828;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.4077;END=22051995;EUR_AF=0.2048;MEINFO=AluYc,242,282,-;NS=2504;SAS_AF=0.3374;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	0|1
21	23746673	DEL_pindel_51350	TACCCTAAGCCATATCTCTCAAGTTCAAAGTTCTACAGCTCTCTAGGGTAGGGGCAAA	T	.	PASS	AC=416;AF=0.0830671;AFR_AF=0.0756;AMR_AF=0.0533;AN=5008;CS=DEL_pindel;EAS_AF=0.0962;END=23746730;EUR_AF=0.0865;NS=2504;SAS_AF=0.0971;SITEPOST=0.9999;SVTYPE=DEL	GT	0|1
21	24742232	DEL_pindel_51373	TAAAAAAATTATCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1901;AF=0.379593;AFR_AF=0.5605;AMR_AF=0.3617;AN=5008;CS=DEL_pindel;EAS_AF=0.2282;END=24742546;EUR_AF=0.3549;MEINFO=AluYa3_1,1,281,+;NS=2504;SAS_AF=0.3292;SITEPOST=0.9942;SVTYPE=DEL_ALU	GT	1|0
21	24828945	DEL_pindel_51375	CAAGAAATATAGTGACAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2052;AF=0.409744;AFR_AF=0.3215;AMR_AF=0.4654;AN=5008;CS=DEL_pindel;EAS_AF=0.497;END=24829264;EUR_AF=0.3648;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.4458;SITEPOST=0.9916;SVTYPE=DEL_ALU	GT	1|0
21	26497431	ALU_umary_ALU_12334	G	<INS:ME:ALU>	.	.	AC=1899;AF=0.379193;AFR_AF=0.2458;AMR_AF=0.3876;AN=5008;CS=ALU_umary;EAS_AF=0.5357;EUR_AF=0.3787;MEINFO=AluYa3_5,1,259,+;NS=2504;SAS_AF=0.3926;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=AAGGAAGGATG	GT	1|0
21	26825131	DEL_pindel_51420	TAAAGTGTAGATGCTCTATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2188;AF=0.436901;AFR_AF=0.5628;AMR_AF=0.4006;AN=5008;CS=DEL_pindel;EAS_AF=0.2242;END=26825398;EUR_AF=0.5646;MEINFO=LINE1,5793,5820,+;NS=2504;SAS_AF=0.3804;SITEPOST=0.9989;SVTYPE=DEL_LINE1	GT	1|0
21	27374095	INV_delly_INV00066128	T	<INV>	.	PASS	AC=4299;AF=0.858427;AFR_AF=0.8215;AMR_AF=0.8228;AN=5008;CIEND=-62,62;CIPOS=-62,62;CS=INV_delly;EAS_AF=0.9226;END=27374746;EUR_AF=0.9046;IMPRECISE;NS=2504;SAS_AF=0.82;SITEPOST=1;SVTYPE=INV	GT	1|0
21	28020653	INV_delly_INV00066155	C	<INV>	.	PASS	AC=2696;AF=0.538339;AFR_AF=0.5514;AMR_AF=0.5173;AN=5008;CIEND=-105,105;CIPOS=-105,105;CS=INV_delly;EAS_AF=0.6091;END=28021711;EUR_AF=0.5159;IMPRECISE;MC=CINV_delly_INV00066154;NS=2504;SAS_AF=0.4857;SITEPOST=1;SVTYPE=INV	GT	1|0
21	28221359	ALU_umary_ALU_12341	T	<INS:ME:ALU>	.	.	AC=800;AF=0.159744;AFR_AF=0.1256;AMR_AF=0.2392;AN=5008;CS=ALU_umary;EAS_AF=0.003;EUR_AF=0.2724;MEINFO=AluYe5,1,264,-;NS=2504;SAS_AF=0.1953;SITEPOST=1;SVLEN=263;SVTYPE=ALU;TSD=CCGGGAAATGCTTTTTATT	GT	0|1
21	30552224	UW_VH_1264	A	<CN0>	100	PASS	AC=2540;AF=0.507188;AFR_AF=0.2526;AMR_AF=0.5418;AN=5008;CIEND=0,534;CIPOS=-414,0;CS=DEL_union;EAS_AF=0.4921;END=30552588;EUR_AF=0.7256;MC=DEL_pindel_51520,BI_GS_DEL1_B2_P2827_413;NS=2504;SAS_AF=0.6176;SVTYPE=DEL	GT	1|1
21	30601816	DEL_pindel_51522	ACCGGCTATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGG	A	.	PASS	AC=3640;AF=0.726837;AFR_AF=0.8222;AMR_AF=0.5965;AN=5008;CS=DEL_pindel;EAS_AF=0.5813;END=30602156;EUR_AF=0.7475;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.819;SITEPOST=0.9821;SVTYPE=DEL_ALU	GT	1|0
21	37014963	BI_GS_DEL1_B1_P2834_15	A	<CN0>	100	PASS	AC=3947;AF=0.788139;AFR_AF=0.8253;AMR_AF=0.7839;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7292;END=37015170;EUR_AF=0.8042;NS=2504;SAS_AF=0.7853;SVTYPE=DEL	GT	1|1
21	37237944	ALU_umary_ALU_12400	T	<INS:ME:ALU>	.	.	AC=1388;AF=0.277157;AFR_AF=0.1218;AMR_AF=0.2925;AN=5008;CS=ALU_umary;EAS_AF=0.2708;EUR_AF=0.4423;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.3129;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAATGTTATTTTT	GT	1|0
21	37321097	ALU_umary_ALU_12403	T	<INS:ME:ALU>	.	.	AC=393;AF=0.0784744;AFR_AF=0.0855;AMR_AF=0.0865;AN=5008;CS=ALU_umary;EAS_AF=0.003;EUR_AF=0.1402;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.0777;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGTTGAATCTTTTT	GT	0|1
21	37864436	DEL_pindel_51688	TAAAAAAAATGCAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCCCAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=796;AF=0.158946;AFR_AF=0.1952;AMR_AF=0.0504;AN=5008;CS=DEL_pindel;EAS_AF=0.2867;END=37864758;EUR_AF=0.0268;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.1912;SITEPOST=0.99975;SVTYPE=DEL_ALU	GT	0|1
21	39004560	ALU_umary_ALU_12411	T	<INS:ME:ALU>	.	.	AC=681;AF=0.135982;AFR_AF=0.0318;AMR_AF=0.1124;AN=5008;CS=ALU_umary;EAS_AF=0.2768;EUR_AF=0.1809;MEINFO=AluUndef,2,280,+;NS=2504;SAS_AF=0.1022;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAAAATTACCTCGT	GT	1|0
21	39900346	DEL_pindel_51713	GCCATAGCAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=1895;AF=0.378395;AFR_AF=0.3215;AMR_AF=0.5115;AN=5008;CS=DEL_pindel;EAS_AF=0.2282;END=39900670;EUR_AF=0.497;MEINFO=AluYa3_4,2,281,-;NS=2504;SAS_AF=0.3937;SITEPOST=0.9989;SVTYPE=DEL_ALU	GT	1|0
21	41586865	DEL_pindel_51770	TAAAGATATGGAATCCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAGTACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2386;AF=0.476438;AFR_AF=0.388;AMR_AF=0.513;AN=5008;CS=DEL_pindel;EAS_AF=0.5784;END=41587190;EUR_AF=0.4722;MEINFO=AluYb3a1,16,281,+;NS=2504;SAS_AF=0.4693;SITEPOST=0.99725;SVTYPE=DEL_ALU	GT	0|1
21	42054568	DEL_pindel_51789	AGGAAGGGAAGGGAAGGGAGCGGAGGGGGAGGGGAGGGGAGGGGAAGGGAGCGGAGGGGAAGGGAGCGGAGGGGAAGGGAGGGGAGGGGAGGGGAGGGGAAGGGAGCGGAGGGGGGGGGGAGGGGAGGGAAGGAGAGGGGAGGGGAGGGGAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	A	.	PASS	AC=1079;AF=0.215455;AFR_AF=0.2542;AMR_AF=0.1441;AN=5008;CS=DEL_pindel;EAS_AF=0.255;END=42054759;EUR_AF=0.1392;NS=2504;SAS_AF=0.2515;SITEPOST=0.99285;SVTYPE=DEL	GT	1|1
21	42341846	DEL_pindel_51800	TGGAAGGAATTAAAGAGAGAGAAGTTAGGAAGGAGGGAGGGAGGAAAGATACAGAA	T	.	PASS	AC=1458;AF=0.291134;AFR_AF=0.407;AMR_AF=0.3473;AN=5008;CS=DEL_pindel;EAS_AF=0.1964;END=42341901;EUR_AF=0.2465;NS=2504;SAS_AF=0.2382;SITEPOST=0.9956;SVTYPE=DEL	GT	0|1
21	42402882	DEL_pindel_51802	TAGAAAATACCTAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3016;AF=0.602236;AFR_AF=0.7383;AMR_AF=0.6254;AN=5008;CS=DEL_pindel;EAS_AF=0.3631;END=42403203;EUR_AF=0.6521;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5971;SITEPOST=0.9871;SVTYPE=DEL_ALU	GT	1|0
21	45619181	UW_VH_1275	G	<CN0>	100	PASS	AC=1284;AF=0.25639;AFR_AF=0.2905;AMR_AF=0.121;AN=5008;CIEND=0,428;CIPOS=-473,0;CS=DEL_union;EAS_AF=0.2639;END=45620711;EUR_AF=0.2555;MC=YL_CN_STU_4348,EM_DL_DEL10651203,SI_BD_17477,BI_GS_DEL1_B1_P2842_470;NS=2504;SAS_AF=0.2996;SVTYPE=DEL	GT	1|1
21	45850285	DEL_pindel_51926	TGAGCAAGTGGATTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTTCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=3185;AF=0.635982;AFR_AF=0.6316;AMR_AF=0.5836;AN=5008;CS=DEL_pindel;EAS_AF=0.7014;END=45850611;EUR_AF=0.6322;MEINFO=AluYb8,1,281,-;NS=2504;SAS_AF=0.6155;SITEPOST=0.9786;SVTYPE=DEL_ALU	GT	1|1
21	47657351	BI_GS_DEL1_B1_P2844_480	C	<CN0>	100	PASS	AC=2029;AF=0.405152;AFR_AF=0.4803;AMR_AF=0.4928;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3254;END=47658672;EUR_AF=0.3598;MC=EM_DL_DEL10653640,YL_CN_STU_4352,YL_CN_ITU_4429,SI_BD_17513,YL_CN_ACB_4794,UW_VH_2781;NS=2504;SAS_AF=0.3701;SVTYPE=DEL	GT	0|1
22	16050654	DUP_gs_CNV_22_16050654_16063474	A	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	AC=9,87,599,20;AF=0.00179712,0.0173722,0.119609,0.00399361;AFR_AF=0.0061,0.0363,0.0053,0;AMR_AF=0,0.0101,0.219,0.0072;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.0169,0.2361,0.0099;END=16063474;EUR_AF=0,0.007,0.0944,0.003;NS=2504;SAS_AF=0,0.0082,0.1094,0.002;SITEPOST=0.9912;SVTYPE=CNV	GT	3|0
22	17026339	SI_BD_17531	T	<CN0>	100	PASS	AC=2130;AF=0.425319;AFR_AF=0.4115;AMR_AF=0.536;AN=5008;CIEND=-50,76;CIPOS=-76,50;CS=DEL_union;EAS_AF=0.4375;END=17027748;EUR_AF=0.3877;NS=2504;SAS_AF=0.3916;SVTYPE=DEL	GT	1|1
22	18003573	UW_VH_25223	G	<CN0>	100	PASS	AC=1523;AF=0.304113;AFR_AF=0.1483;AMR_AF=0.2205;AN=5008;CIEND=0,356;CIPOS=-323,0;CS=DEL_union;EAS_AF=0.3046;END=18004242;EUR_AF=0.4294;MC=UW_VH_13817,BI_GS_DEL1_B5_P2864_3,UW_VH_10605,UW_VH_10877,BI_GS_DEL1_B3_P2864_1,UW_VH_2431,SI_BD_17543;NS=2504;SAS_AF=0.4448;SVTYPE=DEL	GT	1|1
22	18047360	DEL_pindel_52026	CTATCCTTGCTTTTATTTATTTATTTATTTATTTATTTATTTATTTTATTTTATTTTATTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	C	.	PASS	AC=1787;AF=0.356829;AFR_AF=0.2731;AMR_AF=0.3876;AN=5008;CS=DEL_pindel;EAS_AF=0.373;END=18047718;EUR_AF=0.4443;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.3415;SITEPOST=0.9989;SVTYPE=DEL_ALU	GT	1|0
22	18057747	EM_DL_DEL60768	T	<CN0>	100	PASS	AC=3620;AF=0.722843;AFR_AF=0.7231;AMR_AF=0.6542;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.501;END=18060454;EUR_AF=0.8797;MC=BI_GS_DEL1_B4_P2864_12,YL_CN_ACB_4813,YL_CN_CDX_3610,UW_VH_1280,YL_CN_BEB_3500,SI_BD_17546,YL_CN_MXL_3558;NS=2504;SAS_AF=0.8384;SVTYPE=DEL	GT	1|0
22	18099516	DEL_pindel_52031	GAAAGAGTCATACAAGAGGCCAGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	G	.	PASS	AC=1404;AF=0.280351;AFR_AF=0.4077;AMR_AF=0.2882;AN=5008;CS=DEL_pindel;EAS_AF=0.2113;END=18099826;EUR_AF=0.2982;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1554;SITEPOST=0.9999;SVTYPE=DEL_ALU	GT	1|1
22	18141696	EM_DL_DEL60817	G	<CN0>	100	PASS	AC=338;AF=0.067492;AFR_AF=0.0068;AMR_AF=0.1326;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.004;END=18144628;EUR_AF=0.173;MC=YL_CN_PEL_4123,BI_GS_DEL1_B5_P2864_119,UW_VH_1282,YL_CN_ITU_4453;NS=2504;SAS_AF=0.0603;SVTYPE=DEL	GT	1|0
22	18283896	DEL_pindel_52042	ATCCTGAGTTTCCTTTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCCGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=1780;AF=0.355431;AFR_AF=0.5008;AMR_AF=0.268;AN=5008;CS=DEL_pindel;EAS_AF=0.3363;END=18284218;EUR_AF=0.2753;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3231;SITEPOST=0.999;SVTYPE=DEL_ALU	GT	1|0
22	18977575	DEL_pindel_52051	CTGATCACATTTCAACATGAGATTTGGAGGGGCCAGACCTCAAAACTGCATCAGATACATTCATGT	C	.	PASS	AC=2405;AF=0.480232;AFR_AF=0.4236;AMR_AF=0.5231;AN=5008;CS=DEL_pindel;EAS_AF=0.5526;END=18977640;EUR_AF=0.665;NS=2504;SAS_AF=0.2618;SITEPOST=0.9995;SVTYPE=DEL	GT	1|1
22	19571624	UW_VH_1284	C	<CN0>	100	PASS	AC=1704;AF=0.340256;AFR_AF=0.2958;AMR_AF=0.3156;AN=5008;CIEND=0,462;CIPOS=-522,0;CS=DEL_union;EAS_AF=0.3204;END=19573094;EUR_AF=0.3499;MC=YL_CN_GIH_3265,EM_DL_DEL10655388,YL_CN_LWK_4013,YL_CN_CHS_4492,YL_CN_GBR_4262,SI_BD_17567,YL_CN_ESN_4215,YL_CN_MSL_3839,YL_CN_ACB_4828,YL_CN_MXL_3570,BI_GS_DEL1_B2_P2865_408,YL_CN_BEB_3511;NS=2504;SAS_AF=0.4284;SVTYPE=DEL	GT	1|1
22	20950623	BI_GS_DEL1_B5_P2866_441	C	<CN0>	100	PASS	AC=812;AF=0.162141;AFR_AF=0.1278;AMR_AF=0.1657;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1438;END=20953843;EUR_AF=0.2018;MC=YL_CN_CLM_3679,YL_CN_MXL_3579,UW_VH_1930,SI_BD_17578,EM_DL_DEL61007,UW_VH_7773;NS=2504;SAS_AF=0.184;SVTYPE=DEL	GT	0|1
22	23576847	BI_GS_DEL1_B2_P2869_487	T	<CN0>	100	PASS	AC=701;AF=0.139976;AFR_AF=0.0272;AMR_AF=0.17;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0526;END=23577807;EUR_AF=0.2763;MC=UW_VH_19548,UW_VH_10388,EM_DL_DEL10657232,UW_VH_11136,SI_BD_17601,UW_VH_25322,UW_VH_50,UW_VH_4531;NS=2504;SAS_AF=0.2209;SVTYPE=DEL	GT	1|1
22	23900769	BI_GS_DEL1_B1_P2869_715	G	<CN0>	100	PASS	AC=1078;AF=0.215256;AFR_AF=0.2322;AMR_AF=0.1383;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.4306;END=23903232;EUR_AF=0.1431;MC=UW_VH_3340,EM_DL_DEL61393,YL_CN_PJL_4847,YL_CN_MSL_3867,SI_BD_17604;NS=2504;SAS_AF=0.0992;SVTYPE=DEL	GT	1|0
22	23964852	DEL_pindel_52182	TTTTCATAGAGACCATTTAAAAAAGAATATGAAAATGCTACAATTAAAAATAGTCATGA	T	.	PASS	AC=1127;AF=0.22504;AFR_AF=0.2103;AMR_AF=0.2075;AN=5008;CS=DEL_pindel;EAS_AF=0.2688;END=23964910;EUR_AF=0.2326;NS=2504;SAS_AF=0.2045;SITEPOST=0.9995;SVTYPE=DEL	GT	1|1
22	24025584	BI_GS_DEL1_B5_P2870_15	G	<CN0>	100	PASS	AC=384;AF=0.0766773;AFR_AF=0.0673;AMR_AF=0.1182;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0179;END=24027537;EUR_AF=0.168;MC=UW_VH_1931,EM_DL_DEL10657482,YL_CN_TSI_4213,UW_VH_19664,UW_VH_11145;NS=2504;SAS_AF=0.0266;SVTYPE=DEL	GT	1|1
22	24198505	ALU_umary_ALU_12455	A	<INS:ME:ALU>	.	.	AC=1264;AF=0.252396;AFR_AF=0.267;AMR_AF=0.2767;AN=5008;CS=ALU_umary;EAS_AF=0.1954;EUR_AF=0.3131;MEINFO=AluY,1,277,+;NS=2504;SAS_AF=0.2117;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=null	GT	0|1
22	24276431	UW_VH_1651	A	<CN0>	100	PASS	AC=3501;AF=0.699081;AFR_AF=0.4228;AMR_AF=0.6369;AN=5008;CIEND=0,488;CIPOS=-455,0;CS=DEL_union;EAS_AF=0.8671;END=24279231;EUR_AF=0.7594;MC=SI_BD_17610,YL_CN_KHV_4802,YL_CN_CDX_3681,YL_CN_IBS_3927,EM_DL_DEL61475,YL_CN_CHB_4441,YL_CN_BEB_3551,BI_GS_DEL1_B1_P2870_194;NS=2504;SAS_AF=0.8814;SVTYPE=DEL	GT	0|1
22	24326713	DUP_gs_CNV_22_24326713_24333476	C	<CN0>,<CN2>	.	PASS	AC=2131,55;AF=0.425519,0.0109824;AFR_AF=0.1989,0.0333;AMR_AF=0.4798,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.3056,0.0079;END=24333476;EUR_AF=0.5964,0;NS=2504;SAS_AF=0.6411,0.001;SITEPOST=1;SVTYPE=CNV	GT	0|1
22	26891514	DEL_pindel_52250	ATGTGTATATATATACACATATATATATGTGTGTGTGTGTATACATATATACATATATATGTGTGTATATACATATATGTGTATATACATGTGTATATATACATGTATATGCATGTGTGTATATATATACATATATG	A	.	PASS	AC=1554;AF=0.310304;AFR_AF=0.2549;AMR_AF=0.2997;AN=5008;CS=DEL_pindel;EAS_AF=0.2698;END=26891650;EUR_AF=0.3151;NS=2504;SAS_AF=0.4294;SITEPOST=0.9966;SVTYPE=DEL	GT	1|0
22	29633088	BI_GS_DEL1_B1_P2875_469	T	<CN0>	100	PASS	AC=857;AF=0.171126;AFR_AF=0.2943;AMR_AF=0.1023;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1438;END=29635394;EUR_AF=0.0934;MC=YL_CN_MXL_3612,UW_VH_3527;NS=2504;SAS_AF=0.1616;SVTYPE=DEL	GT	1|1
22	31776449	DUP_gs_CNV_22_31776449_31780070	T	<CN0>,<CN2>	.	PASS	AC=786,3;AF=0.156949,0.00059904;AFR_AF=0.0719,0;AMR_AF=0.0418,0;AN=5008;CS=DUP_gs;EAS_AF=0.3601,0.002;END=31780070;EUR_AF=0.0646,0.001;MC=BI_GS_DEL1_B3_P2877_21,UW_VH_4398,EM_DL_DEL61815,YL_CN_FIN_4129;NS=2504;SAS_AF=0.2393,0;SITEPOST=1;SVTYPE=CNV	GT	1|1
22	32819942	ALU_umary_ALU_12480	T	<INS:ME:ALU>	.	.	AC=217;AF=0.0433307;AFR_AF=0.0053;AMR_AF=0.0648;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.1173;MEINFO=AluUndef,30,260,+;NS=2504;SAS_AF=0.047;SITEPOST=1;SVLEN=230;SVTYPE=ALU;TSD=AAAACTCCACAGCTTT	GT	1|1
22	33751615	DEL_pindel_52369	TCTCAAAAGTAGATCTTCTAACTCCTCCTGGACCACCCTTTCTCTGCCTAGCCCTCCGGCTTTCTGAGGCCCAGTGTTAATATCATGCACCTGAGCCTTCTATAGGGGAGGCTCTCAGTTAGTGGCTCAATGTCCATGGTCGCCAAATACTG	T	.	PASS	AC=1589;AF=0.317292;AFR_AF=0.1074;AMR_AF=0.3228;AN=5008;CS=DEL_pindel;EAS_AF=0.3472;END=33751766;EUR_AF=0.4911;NS=2504;SAS_AF=0.3875;SITEPOST=0.9996;SVTYPE=DEL	GT	1|0
22	34430612	ALU_umary_ALU_12486	T	<INS:ME:ALU>	.	.	AC=2201;AF=0.439497;AFR_AF=0.2118;AMR_AF=0.4741;AN=5008;CS=ALU_umary;EAS_AF=0.5188;EUR_AF=0.5626;MEINFO=AluUndef,1,267,-;NS=2504;SAS_AF=0.5143;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=CAAATGGAACTTTT	GT	1|1
22	35645163	BI_GS_DEL1_B1_P2881_680	T	<CN0>	100	PASS	AC=2311;AF=0.461462;AFR_AF=0.0726;AMR_AF=0.6081;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5238;END=35646142;EUR_AF=0.6809;MC=SI_BD_17674,YL_CN_CHB_4466,YL_CN_KHV_4823;NS=2504;SAS_AF=0.593;SVTYPE=DEL	GT	1|0
22	37124157	DEL_pindel_52477	TGTGTGTGTGTCCATGTGTGTGCATGTGTGTGTGGACATGTACATATGTGTATGTGTGCCTGTGCATGTGTGGGCAGTGTGTGCATGTACATGTGTGCATGC	T	.	PASS	AC=1448;AF=0.289137;AFR_AF=0.1974;AMR_AF=0.3012;AN=5008;CS=DEL_pindel;EAS_AF=0.3542;END=37124258;EUR_AF=0.335;NS=2504;SAS_AF=0.2904;SITEPOST=0.9982;SVTYPE=DEL	GT	0|1
22	37127073	DEL_pindel_52478	TTGTTTTTTGTTTTTTTTTATTTTTTTTTATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGG	T	.	PASS	AC=3270;AF=0.652955;AFR_AF=0.584;AMR_AF=0.6844;AN=5008;CS=DEL_pindel;EAS_AF=0.6845;END=37127245;EUR_AF=0.67;MEINFO=AluY,156,281,-;NS=2504;SAS_AF=0.6738;SITEPOST=0.966;SVTYPE=DEL_ALU	GT	0|1
22	37143062	YL_CN_GIH_3320	G	<CN0>	100	PASS	AC=2987;AF=0.596446;AFR_AF=0.2315;AMR_AF=0.7277;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8562;END=37147890;EUR_AF=0.7237;MC=UW_VH_6519,YL_CN_YRI_5400,UW_VH_4985,UW_VH_23907,UW_VH_21095,SI_BD_17691,EM_DL_DEL61999,UW_VH_25177,BI_GS_DEL1_B1_P2883_151,UW_VH_7802,UW_VH_4503,UW_VH_5582,UW_VH_4726,UW_VH_51,UW_VH_9812,UW_VH_16148;NS=2504;SAS_AF=0.5982;SVTYPE=DEL	GT	1|1
22	37143105	SI_BD_17690	G	<CN0>	100	PASS	AC=3070;AF=0.613019;AFR_AF=0.2935;AMR_AF=0.7334;AN=5008;CIEND=-71,184;CIPOS=-184,50;CS=DEL_union;EAS_AF=0.8552;END=37144405;EUR_AF=0.7227;MC=BI_GS_DEL1_B3_P2883_8;NS=2504;SAS_AF=0.5971;SVTYPE=DEL	GT	1|1
22	42140478	DEL_pindel_52594	GCTATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCTCTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	.	PASS	AC=3581;AF=0.715056;AFR_AF=0.8162;AMR_AF=0.536;AN=5008;CS=DEL_pindel;EAS_AF=0.7927;END=42140800;EUR_AF=0.6889;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.6524;SITEPOST=0.9893;SVTYPE=DEL_ALU	GT	1|1
22	42717347	BI_GS_DEL1_B5_P2888_704	G	<CN0>	100	PASS	AC=45;AF=0.00898562;AFR_AF=0;AMR_AF=0.0101;AN=5008;CIEND=-15,15;CIPOS=-15,15;CS=DEL_union;EAS_AF=0;END=42719846;EUR_AF=0.0378;MC=UW_VH_2910;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	1|0
22	43985160	DEL_pindel_52625	CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTACAG	C	.	PASS	AC=1465;AF=0.292532;AFR_AF=0.0719;AMR_AF=0.464;AN=5008;CS=DEL_pindel;EAS_AF=0.5704;END=43985210;EUR_AF=0.2346;NS=2504;SAS_AF=0.2423;SITEPOST=0.9998;SVTYPE=DEL	GT	0|1
22	44324605	L1_umary_LINE1_2991	C	<INS:ME:LINE1>	.	.	AC=942;AF=0.188099;AFR_AF=0.0734;AMR_AF=0.183;AN=5008;CS=L1_umary;EAS_AF=0.1845;EUR_AF=0.34;MEINFO=LINE1,4969,5986,-;NS=2504;SAS_AF=0.1943;SITEPOST=1;SVLEN=1017;SVTYPE=LINE1;TSD=TGCAAAGGGCATTTTC	GT	0|1
22	45252401	BI_GS_DEL1_B5_P2891_217	G	<CN0>	100	PASS	AC=727;AF=0.145168;AFR_AF=0.3177;AMR_AF=0.0677;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0665;END=45253090;EUR_AF=0.1173;MC=UW_VH_2433;NS=2504;SAS_AF=0.0767;SVTYPE=DEL	GT	1|0
22	47696468	BI_GS_DEL1_B3_P2893_37	A	<CN0>	100	PASS	AC=1200;AF=0.239617;AFR_AF=0.5734;AMR_AF=0.1499;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0635;END=47696864;EUR_AF=0.172;MC=BI_GS_DEL1_B1_P2893_606,DEL_pindel_52724;NS=2504;SAS_AF=0.1033;SVTYPE=DEL	GT	1|0
22	48645210	DEL_pindel_52741	TAAGATTGCGCCTTGGGCCGGGCACGGTGGCTCACTCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTATAACGGTGAATCCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAACAAAAAAAA	T	.	PASS	AC=2639;AF=0.526957;AFR_AF=0.4387;AMR_AF=0.5663;AN=5008;CS=DEL_pindel;EAS_AF=0.4613;END=48645528;EUR_AF=0.6103;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6002;SITEPOST=0.9986;SVTYPE=DEL_ALU	GT	1|1
22	49077605	BI_GS_DEL1_B1_P2895_53	A	<CN0>	100	PASS	AC=1548;AF=0.309105;AFR_AF=0.2035;AMR_AF=0.3256;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.1726;END=49077889;EUR_AF=0.4622;MC=UW_VH_1653,DEL_pindel_52769;NS=2504;SAS_AF=0.4233;SVTYPE=DEL	GT	1|1
22	49425473	SVA_umary_SVA_833	C	<INS:ME:SVA>	.	.	AC=2521;AF=0.503395;AFR_AF=0.4425;AMR_AF=0.5807;AN=5008;CS=SVA_umary;EAS_AF=0.505;EUR_AF=0.5348;MEINFO=SVA,5,1627,+;NS=2504;SAS_AF=0.4969;SITEPOST=1;SVLEN=1622;SVTYPE=SVA;TSD=AAGAAAACTCCTTGCTC	GT	0|1
22	49750824	DEL_pindel_52814	TGTGATTAAACCCTGAAGGATCCCTGTAAAGGGTCCAACTGGGGTGACCACACAGTGC	T	.	PASS	AC=718;AF=0.143371;AFR_AF=0.0287;AMR_AF=0.1354;AN=5008;CS=DEL_pindel;EAS_AF=0.3075;END=49750881;EUR_AF=0.1292;NS=2504;SAS_AF=0.1493;SITEPOST=0.9916;SVTYPE=DEL	GT	0|1
22	50273378	ALU_umary_ALU_12536	T	<INS:ME:ALU>	.	.	AC=1482;AF=0.295927;AFR_AF=0.0847;AMR_AF=0.3847;AN=5008;CS=ALU_umary;EAS_AF=0.4038;EUR_AF=0.4105;MEINFO=AluUndef,1,278,-;NS=2504;SAS_AF=0.2894;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=GTCTGGGCCTGTTT	GT	0|1
22	50664005	DEL_pindel_52851	GCTCCCCCTTGGCACCCACCCTTCATCTCAACTCCCCGTTGACACCCACCCTTCATCTCAA	G	.	PASS	AC=664;AF=0.132588;AFR_AF=0.149;AMR_AF=0.0692;AN=5008;CS=DEL_pindel;EAS_AF=0.0873;END=50664065;EUR_AF=0.1322;NS=2504;SAS_AF=0.2025;SITEPOST=0.9985;SVTYPE=DEL	GT	0|1
X	61438	BI_GS_DEL1_B1_P2898_3	A	<CN0>	100	PASS	AC=307;AF=0.134185;AFR_AF=0.171;AMR_AF=0.0389;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1766;END=61910;EUR_AF=0.0378;MC=UW_VH_1291;NS=2504;SAS_AF=0.2076;SVTYPE=DEL	GT	.
X	163196	BI_GS_DEL1_B4_P2898_4	A	<CN0>	100	PASS	AC=4;AF=0.00139776;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=-61,61;CIPOS=-61,61;CS=DEL_union;EAS_AF=0;END=182825;EUR_AF=0.002;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	.
X	192421	BI_GS_DEL1_B3_P2898_9	A	<CN0>	100	PASS	AC=5;AF=0.00139776;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-25,26;CIPOS=-25,26;CS=DEL_union;EAS_AF=0;END=212051;EUR_AF=0.003;MC=YL_CN_ESN_4304,YL_CN_STU_4477,BI_GS_DEL1_B3_P2898_11;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	.
X	195224	BI_GS_DEL1_B4_P2898_9	G	<CN0>	100	PASS	AC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=-75,75;CIPOS=-75,75;CS=DEL_union;EAS_AF=0.001;END=198275;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	209510	UW_VH_11361	C	<CN0>	100	PASS	AC=3;AF=0.00059904;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=0,369;CIPOS=-259,0;CS=DEL_union;EAS_AF=0;END=221124;EUR_AF=0.003;MC=BI_GS_DEL1_B2_P2898_19;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	288023	UW_VH_24597	T	<CN0>	100	PASS	AC=14;AF=0.00459265;AFR_AF=0.0174;AMR_AF=0;AN=2542;CIEND=0,135;CIPOS=-150,0;CS=DEL_union;EAS_AF=0;END=290864;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	351731	BI_GS_DEL1_B1_P2898_55	G	<CN0>	100	PASS	AC=2;AF=0.00059904;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0;END=353424;EUR_AF=0.003;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	358103	BI_GS_DEL1_B4_P2898_27	A	<CN0>	100	PASS	AC=5;AF=0.00139776;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-52,53;CIPOS=-52,53;CS=DEL_union;EAS_AF=0;END=418783;EUR_AF=0.003;MC=UW_VH_19586;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	.
X	369994	YL_CN_ACB_4935	A	<CN0>	100	PASS	AC=5;AF=0.00119808;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=394320;EUR_AF=0.002;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	.
X	378345	BI_GS_DEL1_B5_P2898_85	G	<CN0>	100	PASS	AC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0.0014;AN=2542;CIEND=-59,59;CIPOS=-59,59;CS=DEL_union;EAS_AF=0;END=384651;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	399249	BI_GS_DEL1_B5_P2898_95	T	<CN0>	100	PASS	AC=601;AF=0.233826;AFR_AF=0.4402;AMR_AF=0.1196;AN=2542;CIEND=-7,8;CIPOS=-7,8;CS=DEL_union;EAS_AF=0.1399;END=399872;EUR_AF=0.0934;MC=UW_VH_2274;NS=2504;SAS_AF=0.2771;SVTYPE=DEL	GT	.
X	434172	BI_GS_DEL1_B5_P2898_114	G	<CN0>	100	PASS	AC=6;AF=0.00179712;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0;END=438430;EUR_AF=0;NS=2504;SAS_AF=0.0072;SVTYPE=DEL	GT	.
X	582189	BI_GS_DEL1_B4_P2898_66	A	<CN0>	100	PASS	AC=1;AF=0.00059904;AFR_AF=0.0008;AMR_AF=0;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0.002;END=589559;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	626635	BI_GS_DEL1_B5_P2898_225	C	<CN0>	100	PASS	AC=26;AF=0.0101837;AFR_AF=0.0272;AMR_AF=0.0029;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=627257;EUR_AF=0;MC=UW_VH_7720;NS=2504;SAS_AF=0.0133;SVTYPE=DEL	GT	.
X	634214	UW_VH_18310	G	<CN0>	100	PASS	AC=7;AF=0.00219649;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=0,226;CIPOS=-241,0;CS=DEL_union;EAS_AF=0;END=643106;EUR_AF=0.003;MC=YL_CN_TSI_4283;NS=2504;SAS_AF=0.0061;SVTYPE=DEL	GT	.
X	650623	DEL_pindel_52911	ATGCTTAGTAGGTGCTTATATGCTTAGTAGGAGCTTATGTGCTTAGTAGGAACTCACG	A	.	PASS	AC=1820;AF=0.363419;AFR_AF=0.3464;AMR_AF=0.402;AN=5008;CS=DEL_pindel;EAS_AF=0.4077;END=650680;EUR_AF=0.3131;NS=2504;SAS_AF=0.365;SVTYPE=DEL	GT	1|0
X	724352	BI_GS_DEL1_B1_P2898_219	G	<CN0>	100	PASS	AC=189;AF=0.0748802;AFR_AF=0.1248;AMR_AF=0.0706;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.0407;END=725376;EUR_AF=0.0895;MC=UW_VH_3024;NS=2504;SAS_AF=0.0307;SVTYPE=DEL	GT	.
X	743015	YL_CN_IBS_3981	T	<CN0>	100	PASS	AC=6;AF=0.00259585;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0079;END=749324;EUR_AF=0.005;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	743673	UW_VH_1654	A	<CN0>	100	PASS	AC=107;AF=0.0389377;AFR_AF=0.0045;AMR_AF=0.0202;AN=2542;CIEND=0,357;CIPOS=-349,0;CS=DEL_union;EAS_AF=0.0685;END=746404;EUR_AF=0.0755;MC=BI_GS_DEL1_B1_P2898_229,YL_CN_FIN_4195;NS=2504;SAS_AF=0.0307;SVTYPE=DEL	GT	.
X	768929	BI_GS_DEL1_B1_P2898_240	C	<CN0>	100	PASS	AC=0;AF=0.00019968;AFR_AF=0;AMR_AF=0.0014;AN=2542;CIEND=-64,65;CIPOS=-64,65;CS=DEL_union;EAS_AF=0;END=772446;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	780426	YL_CN_CLM_3760	G	<CN0>	100	PASS	AC=7;AF=0.00199681;AFR_AF=0.0023;AMR_AF=0.0058;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=828314;EUR_AF=0.003;MC=BI_GS_DEL1_B5_P2898_328;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	785956	BI_GS_DEL1_B1_P2898_253	C	<CN0>	100	PASS	AC=0;AF=0.00039936;AFR_AF=0;AMR_AF=0.0014;AN=2542;CIEND=-20,20;CIPOS=-20,20;CS=DEL_union;EAS_AF=0.001;END=787198;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	793106	BI_GS_DEL1_B3_P2898_63	T	<CN0>	100	PASS	AC=9;AF=0.00339457;AFR_AF=0.0098;AMR_AF=0.0029;AN=2542;CIEND=-38,39;CIPOS=-38,39;CS=DEL_union;EAS_AF=0;END=810898;EUR_AF=0.002;MC=YL_CN_GWD_5737;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	820642	YL_CN_MXL_3667	C	<CN0>	100	PASS	AC=86;AF=0.0333466;AFR_AF=0.0257;AMR_AF=0.0432;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.001;END=824644;EUR_AF=0.0616;MC=BI_GS_DEL1_B1_P2898_274,UW_VH_12532,UW_VH_9778;NS=2504;SAS_AF=0.0409;SVTYPE=DEL	GT	.
X	824490	BI_GS_DEL1_B4_P2898_110	T	<CN0>	100	PASS	AC=79;AF=0.0333466;AFR_AF=0.0136;AMR_AF=0.0259;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0.001;END=825606;EUR_AF=0.0606;NS=2504;SAS_AF=0.0706;SVTYPE=DEL	GT	.
X	828838	UW_VH_16760	G	<CN0>	100	PASS	AC=3;AF=0.0009984;AFR_AF=0;AMR_AF=0.0014;AN=2542;CIEND=0,369;CIPOS=-178,0;CS=DEL_union;EAS_AF=0;END=829547;EUR_AF=0;MC=BI_GS_DEL1_B5_P2898_359;NS=2504;SAS_AF=0.0041;SVTYPE=DEL	GT	.
X	869425	BI_GS_DEL1_B3_P2898_70	G	<CN0>	100	PASS	AC=1;AF=0.00039936;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0;END=872993;EUR_AF=0;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	.
X	909861	BI_GS_DEL1_B3_P2898_76	A	<CN0>	100	PASS	AC=0;AF=0.00059904;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-29,30;CIPOS=-29,30;CS=DEL_union;EAS_AF=0.001;END=911901;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	910113	BI_GS_DEL1_B4_P2898_126	C	<CN0>	100	PASS	AC=1056;AF=0.421526;AFR_AF=0.4274;AMR_AF=0.3761;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.4077;END=910845;EUR_AF=0.4105;NS=2504;SAS_AF=0.4714;SVTYPE=DEL	GT	.
X	928361	YL_CN_BEB_3610	A	<CN0>	100	PASS	AC=6;AF=0.00139776;AFR_AF=0.0015;AMR_AF=0.0014;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=980277;EUR_AF=0.003;MC=BI_GS_DEL1_B4_P2898_131;NS=2504;SAS_AF=0.001;SVTYPE=DEL	GT	.
X	944859	BI_GS_DEL1_B2_P2898_310	A	<CN0>	100	PASS	AC=0;AF=0.00019968;AFR_AF=0.0008;AMR_AF=0;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=946286;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	945705	BI_GS_DEL1_B3_P2898_81	C	<CN0>	100	PASS	AC=2;AF=0.00059904;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=-54,54;CIPOS=-54,54;CS=DEL_union;EAS_AF=0;END=948987;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1106672	BI_GS_DEL1_B1_P2899_21	A	<CN0>	100	PASS	AC=1388;AF=0.545327;AFR_AF=0.6982;AMR_AF=0.5173;AN=2542;CIEND=-59,60;CIPOS=-59,60;CS=DEL_union;EAS_AF=0.3651;END=1107198;EUR_AF=0.6352;NS=2504;SAS_AF=0.4519;SVTYPE=DEL	GT	.
X	1257090	BI_GS_DEL1_B4_P2899_15	G	<CN0>	100	PASS	AC=55;AF=0.023762;AFR_AF=0.0038;AMR_AF=0.0548;AN=2542;CIEND=-32,33;CIPOS=-32,33;CS=DEL_union;EAS_AF=0.001;END=1257729;EUR_AF=0.0636;NS=2504;SAS_AF=0.0112;SVTYPE=DEL	GT	.
X	1258087	BI_GS_DEL1_B5_P2899_50	T	<CN0>	100	PASS	AC=1;AF=0.00079872;AFR_AF=0;AMR_AF=0.0029;AN=2542;CIEND=-21,22;CIPOS=-21,22;CS=DEL_union;EAS_AF=0;END=1258912;EUR_AF=0.002;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1435871	BI_GS_DEL1_B4_P2899_32	A	<CN0>	100	PASS	AC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0.001;END=1438997;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1437891	BI_GS_DEL1_B4_P2899_33	A	<CN0>	100	PASS	AC=139;AF=0.0539137;AFR_AF=0;AMR_AF=0.0375;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0843;END=1438936;EUR_AF=0.0577;MC=YL_CN_STU_4498;NS=2504;SAS_AF=0.1033;SVTYPE=DEL	GT	.
X	1463758	YL_CN_ACB_4966	C	<CN0>	100	PASS	AC=7;AF=0.00339457;AFR_AF=0.0129;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=1467195;EUR_AF=0;MC=BI_GS_DEL1_B3_P2899_21,UW_VH_13989;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1464989	BI_GS_DEL1_B4_P2899_42	T	<CN0>	100	PASS	AC=3;AF=0.00119808;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-8,9;CIPOS=-8,9;CS=DEL_union;EAS_AF=0;END=1467019;EUR_AF=0;NS=2504;SAS_AF=0.0041;SVTYPE=DEL	GT	.
X	1465463	UW_VH_10728	G	<CN0>	100	PASS	AC=36;AF=0.0133786;AFR_AF=0.0484;AMR_AF=0.0029;AN=2542;CIEND=0,483;CIPOS=-264,0;CS=DEL_union;EAS_AF=0;END=1466325;EUR_AF=0;MC=BI_GS_DEL1_B3_P2899_23;NS=2504;SAS_AF=0.001;SVTYPE=DEL	GT	.
X	1486390	YL_CN_PJL_4950	G	<CN0>	100	PASS	AC=0;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.001;END=1495429;EUR_AF=0;MC=YL_CN_GIH_3356,YL_CN_ACB_4969,YL_CN_YRI_5463;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1517468	YL_CN_PUR_5566	T	<CN0>	100	PASS	AC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0.0014;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=1525056;EUR_AF=0;MC=UW_VH_9474,BI_GS_DEL1_B1_P2899_113;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1535211	DEL_pindel_52949	GACACACACACACACGGACATACAGATACAGTGACAGGCACACACAGACGCAGACATGCACAGATGGGCAC	G	.	PASS	AC=446;AF=0.0890575;AFR_AF=0.0234;AMR_AF=0.0951;AN=5008;CS=DEL_pindel;EAS_AF=0.1081;END=1535281;EUR_AF=0.1779;NS=2504;SAS_AF=0.0624;SVTYPE=DEL	GT	0|1
X	1634919	BI_GS_DEL1_B3_P2899_35	A	<CN0>	100	PASS	AC=2;AF=0.00059904;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-58,58;CIPOS=-58,58;CS=DEL_union;EAS_AF=0;END=1638906;EUR_AF=0.001;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1669235	BI_GS_DEL1_B1_P2899_182	G	<CN0>	100	PASS	AC=0;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0.001;END=1669998;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1671131	BI_GS_DEL1_B4_P2899_79	A	<CN0>	100	PASS	AC=5;AF=0.00159744;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=-11,12;CIPOS=-11,12;CS=DEL_union;EAS_AF=0;END=1676031;EUR_AF=0.004;NS=2504;SAS_AF=0.001;SVTYPE=DEL	GT	.
X	1726628	BI_GS_DEL1_B1_P2899_211	C	<CN0>	100	PASS	AC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0.0014;AN=2542;CIEND=-67,67;CIPOS=-67,67;CS=DEL_union;EAS_AF=0;END=1732502;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1726816	BI_GS_DEL1_B4_P2899_86	C	<CN0>	100	PASS	AC=1;AF=0.0009984;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=-49,50;CIPOS=-49,50;CS=DEL_union;EAS_AF=0.005;END=1727972;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1732247	BI_GS_DEL1_B3_P2899_42	C	<CN0>	100	PASS	AC=0;AF=0.00019968;AFR_AF=0.0008;AMR_AF=0;AN=2542;CIEND=-32,32;CIPOS=-32,32;CS=DEL_union;EAS_AF=0;END=1735059;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1781542	BI_GS_DEL1_B2_P2899_221	A	<CN0>	100	PASS	AC=4;AF=0.00079872;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0;END=1785503;EUR_AF=0.001;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1793123	BI_GS_DEL1_B2_P2899_225	G	<CN0>	100	PASS	AC=189;AF=0.0726837;AFR_AF=0.2579;AMR_AF=0.0331;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=1796182;EUR_AF=0;MC=UW_VH_8316,UW_VH_15922,UW_VH_13091,UW_VH_17896;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1893003	BI_GS_DEL1_B4_P2899_111	A	<CN0>	100	PASS	AC=4;AF=0.00079872;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0.001;END=1895720;EUR_AF=0.001;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1907793	YL_CN_TSI_4323	G	<CN0>	100	PASS	AC=2;AF=0.00039936;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=1925810;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1910842	UW_VH_4479	G	<CN0>	100	PASS	AC=179;AF=0.0710863;AFR_AF=0.1293;AMR_AF=0.0288;AN=2542;CIEND=0,301;CIPOS=-389,0;CS=DEL_union;EAS_AF=0.121;END=1914715;EUR_AF=0.0169;MC=BI_GS_DEL1_B2_P2899_274,YL_CN_STU_4528,YL_CN_MSL_3968;NS=2504;SAS_AF=0.0266;SVTYPE=DEL	GT	.
X	1911061	BI_GS_DEL1_B1_P2899_316	G	<CN0>	100	PASS	AC=572;AF=0.223442;AFR_AF=0.1611;AMR_AF=0.3761;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1974;END=1911661;EUR_AF=0.2157;NS=2504;SAS_AF=0.2342;SVTYPE=DEL	GT	.
X	1915938	YL_CN_TSI_4324	T	<CN0>	100	PASS	AC=5;AF=0.00119808;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=1934002;EUR_AF=0.004;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1922909	BI_GS_DEL1_B4_P2899_122	G	<CN0>	100	PASS	AC=1;AF=0.00019968;AFR_AF=0.0008;AMR_AF=0;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0;END=1926678;EUR_AF=0;MC=UW_VH_20239;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	1989033	YL_CN_CDX_3772	C	<CN0>	100	PASS	AC=6;AF=0.00159744;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.001;END=2002433;EUR_AF=0.005;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2025532	BI_GS_DEL1_B4_P2900_10	C	<CN0>	100	PASS	AC=6;AF=0.00119808;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=-16,17;CIPOS=-16,17;CS=DEL_union;EAS_AF=0;END=2028129;EUR_AF=0.003;MC=YL_CN_LWK_4123;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2034620	BI_GS_DEL1_B5_P2900_27	T	<CN0>	100	PASS	AC=1;AF=0.00059904;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=-11,11;CIPOS=-11,11;CS=DEL_union;EAS_AF=0;END=2035901;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2136964	UW_VH_24815	C	<CN0>	100	PASS	AC=2;AF=0.00039936;AFR_AF=0.0008;AMR_AF=0;AN=2542;CIEND=0,130;CIPOS=-122,0;CS=DEL_union;EAS_AF=0;END=2138666;EUR_AF=0.001;MC=BI_GS_DEL1_B5_P2900_64;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2190036	UW_VH_23390	C	<CN0>	100	PASS	AC=1;AF=0.00019968;AFR_AF=0.0008;AMR_AF=0;AN=2542;CIEND=0,203;CIPOS=-188,0;CS=DEL_union;EAS_AF=0;END=2191231;EUR_AF=0;MC=BI_GS_DEL1_B5_P2900_103;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2253258	BI_GS_DEL1_B2_P2900_96	A	<CN0>	100	PASS	AC=6;AF=0.00159744;AFR_AF=0.0015;AMR_AF=0.0029;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0;END=2260602;EUR_AF=0.004;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2277451	BI_GS_DEL1_B2_P2900_110	G	<CN0>	100	PASS	AC=3;AF=0.00079872;AFR_AF=0.0008;AMR_AF=0;AN=2542;CIEND=-41,42;CIPOS=-41,42;CS=DEL_union;EAS_AF=0.003;END=2278344;EUR_AF=0;MC=UW_VH_7217;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2278503	UW_VH_25404	A	<CN0>	100	PASS	AC=6;AF=0.00219649;AFR_AF=0.0008;AMR_AF=0;AN=2542;CIEND=0,203;CIPOS=-213,0;CS=DEL_union;EAS_AF=0;END=2285307;EUR_AF=0.002;MC=YL_CN_ITU_4612;NS=2504;SAS_AF=0.0082;SVTYPE=DEL	GT	.
X	2280430	BI_GS_DEL1_B1_P2900_136	C	<CN0>	100	PASS	AC=7;AF=0.00179712;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-62,62;CIPOS=-62,62;CS=DEL_union;EAS_AF=0.004;END=2304364;EUR_AF=0.003;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2292543	UW_VH_11141	G	<CN0>	100	PASS	AC=395;AF=0.164137;AFR_AF=0.0393;AMR_AF=0.1643;AN=2542;CIEND=0,442;CIPOS=-470,0;CS=DEL_union;EAS_AF=0.0833;END=2294772;EUR_AF=0.3648;MC=UW_VH_4945,YL_CN_CEU_5368,YL_CN_PUR_5596,BI_GS_DEL1_B3_P2900_11,UW_VH_11793,UW_VH_4142,UW_VH_1292,YL_CN_PJL_4982,YL_CN_STU_4531,UW_VH_3302,UW_VH_6735;NS=2504;SAS_AF=0.2096;SVTYPE=DEL	GT	.
X	2366748	YL_CN_YRI_5495	G	<CN0>	100	PASS	AC=5;AF=0.00119808;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=2399662;EUR_AF=0.003;MC=YL_CN_STU_4534;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2372137	UW_VH_10539	A	<CN0>	100	PASS	AC=13;AF=0.00319489;AFR_AF=0.003;AMR_AF=0.0058;AN=2542;CIEND=0,362;CIPOS=-326,0;CS=DEL_union;EAS_AF=0;END=2377667;EUR_AF=0.004;MC=YL_CN_PJL_4984;NS=2504;SAS_AF=0.0041;SVTYPE=DEL	GT	.
X	2434707	BI_GS_DEL1_B1_P2900_224	T	<CN0>	100	PASS	AC=2;AF=0.00039936;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=-34,35;CIPOS=-34,35;CS=DEL_union;EAS_AF=0.002;END=2435491;EUR_AF=0;MC=UW_VH_6092;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2458444	BI_GS_DEL1_B2_P2900_192	T	<CN0>	100	PASS	AC=444;AF=0.175319;AFR_AF=0.1346;AMR_AF=0.0605;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2034;END=2459473;EUR_AF=0.1312;MC=UW_VH_6424,UW_VH_3423;NS=2504;SAS_AF=0.3282;SVTYPE=DEL	GT	.
X	2515310	BI_GS_DEL1_B1_P2900_291	G	<CN0>	100	PASS	AC=108;AF=0.0459265;AFR_AF=0.0582;AMR_AF=0.0058;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.126;END=2516429;EUR_AF=0.002;MC=UW_VH_5771;NS=2504;SAS_AF=0.0204;SVTYPE=DEL	GT	.
X	2570094	BI_GS_DEL1_B2_P2900_256	G	<CN0>	100	PASS	AC=7;AF=0.00219649;AFR_AF=0.0015;AMR_AF=0.0014;AN=2542;CIEND=-52,53;CIPOS=-52,53;CS=DEL_union;EAS_AF=0.002;END=2589730;EUR_AF=0.006;MC=UW_VH_14408;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2580429	BI_GS_DEL1_B2_P2900_263	C	<CN0>	100	PASS	AC=4;AF=0.00119808;AFR_AF=0.0008;AMR_AF=0.0014;AN=2542;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0.001;END=2581744;EUR_AF=0.001;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	.
X	2622736	BI_GS_DEL1_B5_P2900_517	T	<CN0>	100	PASS	AC=1;AF=0.00039936;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-24,24;CIPOS=-24,24;CS=DEL_union;EAS_AF=0;END=2624007;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2805121	L1_umary_LINE1_2994	A	<INS:ME:LINE1>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0.004;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5570,6018,+;NS=2504;SAS_AF=0;SVLEN=448;SVTYPE=LINE1;TSD=null	GT	0
X	2813405	DEL_pindel_52976	AGTGGCTCATGCCTGTAATCCCAGCAATTTGAGAGGCCGAGGTGGGCAGATTGCTTAAGTCCAGGAGCTCGAGACTAGCATGGGCAACACGACAAAACCTCCTCTGTATAAAATATACAAAAATTAGATGGGCGTGGTGGTGCACGCCTGTGGTCCCAGCTATTTGGGAGGCTGAGGTGGGAGTATCACTAGAGCTTGGGAGGCAGAGGTTGCAGTGAGCAAGATTGTGCCACTGTACTCCAGCCTGGGTGACAGAGCCAGACCCTGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCAAGTGT	A	.	PASS	AC=658;AF=0.174305;AFR_AF=0.1256;AMR_AF=0.1927;AN=3775;CS=DEL_pindel;EAS_AF=0.1662;END=2813728;EUR_AF=0.1984;MEINFO=AluJo,12,282,+;NS=2504;SAS_AF=0.2117;SVTYPE=DEL_ALU	GT	1
X	2901743	BI_GS_DEL1_B1_P2900_544	C	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-47,47;CIPOS=-47,47;CS=DEL_union;EAS_AF=0;END=2930026;EUR_AF=0.0091;MC=YL_CN_GBR_4475;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	2917491	UW_VH_6755	T	<CN0>	100	PASS	AC=14;AF=0.00688742;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=0,300;CIPOS=-280,0;CS=DEL_union;EAS_AF=0.0092;END=2921551;EUR_AF=0.0157;MC=BI_GS_DEL1_B1_P2900_554,YL_CN_CHS_4677;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	2947858	DUP_gs.X_CNV_X_2947858_2957494	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=2957494;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	3011110	BI_GS_DEL1_B2_P2901_5	G	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-33,33;CIPOS=-33,33;CS=DEL_union;EAS_AF=0.0026;END=3020851;EUR_AF=0.0052;MC=YL_CN_KHV_4955;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	3064239	ALU_umary_ALU_12548	A	<INS:ME:ALU>	.	PASS	AC=766;AF=0.202914;AFR_AF=0.2841;AMR_AF=0.1527;AN=3775;CS=ALU_umary;EAS_AF=0.284;EUR_AF=0.124;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0.124;SVLEN=276;SVTYPE=ALU;TSD=AAAAGAAAAAGAAAGA	GT	0
X	3150625	NUMT_umich_MERGED_NUMT_201	T	<INS:MT>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CIEND=-3,0;CIPOS=0,3;CS=NUMT_umich;EAS_AF=0;END=3150627;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=INS	GT	0
X	3185852	UW_VH_9435	T	<CN0>	100	PASS	AC=12;AF=0.010596;AFR_AF=0.013;AMR_AF=0.0057;AN=2542;CIEND=0,271;CIPOS=-239,0;CS=DEL_union;EAS_AF=0.0079;END=3187996;EUR_AF=0.0196;MC=BI_GS_DEL1_B3_P2901_9,YL_CN_MSL_3977;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	3294909	BI_GS_DEL1_B1_P2901_215	T	<CN0>	100	PASS	AC=277;AF=0.264371;AFR_AF=0.2722;AMR_AF=0.2844;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.2592;END=3295535;EUR_AF=0.2507;NS=2504;SAS_AF=0.2591;SVTYPE=DEL	GT	.
X	3326031	EM_DL_DEL103976	G	<CN0>	100	PASS	AC=7;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0052;END=3329216;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	3346301	UW_VH_10697	T	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=0,85;CIPOS=-72,0;CS=DEL_union;EAS_AF=0;END=3351906;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	3484352	DUP_gs.X_CNV_X_3484352_3558867	G	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=3558867;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	3511628	L1_umary_LINE1_2995	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2509,4433,-;NS=2504;SAS_AF=0;SVLEN=1924;SVTYPE=LINE1;TSD=null	GT	0
X	3599706	ALU_umary_ALU_12549	T	<INS:ME:ALU>	.	PASS	AC=378;AF=0.100132;AFR_AF=0.0349;AMR_AF=0.0344;AN=3775;CS=ALU_umary;EAS_AF=0.1885;EUR_AF=0.0822;MEINFO=AluUndef,59,281,-;NS=2504;SAS_AF=0.1643;SVLEN=222;SVTYPE=ALU;TSD=TT	GT	0
X	3606235	BI_GS_DEL1_B2_P2901_246	C	<CN0>	100	PASS	AC=715;AF=0.415894;AFR_AF=0.317;AMR_AF=0.313;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5733;END=3606653;EUR_AF=0.3851;NS=2504;SAS_AF=0.4944;SVTYPE=DEL	GT	.
X	3609471	DEL_pindel_52988	CCCGGGGGAGTGGGCTACATTACATTCTACCTTCAAGAAAAATAACAATTTTTCGA	C	.	PASS	AC=2282;AF=0.604503;AFR_AF=0.6261;AMR_AF=0.6069;AN=3775;CS=DEL_pindel;EAS_AF=0.4804;END=3609526;EUR_AF=0.6736;NS=2504;SAS_AF=0.6309;SVTYPE=DEL	GT	1
X	3687415	BI_GS_DEL1_B5_P2901_523	G	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=3703428;EUR_AF=0.0052;MC=YL_CN_LWK_4127;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	3703420	BI_GS_DEL1_B3_P2901_24	A	<CN0>	100	PASS	AC=13;AF=0.00397351;AFR_AF=0.011;AMR_AF=0.0019;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=3718736;EUR_AF=0.0039;MC=YL_CN_MSL_3978,EM_DL_DEL103986,UW_VH_15773;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	3731706	DUP_gs.X_CNV_X_3731706_3739682	T	<CN0>,<CN2>	.	PASS	AC=5,12;AF=0.0013245,0.00317881;AFR_AF=0.005,0.01;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=3739682;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	3735212	DUP_gs.X_CNV_X_3735212_3745961	G	<CN0>,<CN2>	.	PASS	AC=1,11;AF=0.0002649,0.00291391;AFR_AF=0,0.011;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=3745961;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV	GT	0
X	3879103	L1_umary_LINE1_2996	T	<INS:ME:LINE1>	.	PASS	AC=27;AF=0.00715232;AFR_AF=0.0209;AMR_AF=0.0095;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,1,6019,-;NS=2504;SAS_AF=0;SVLEN=6018;SVTYPE=LINE1;TSD=null	GT	0
X	3973863	DEL_pindel_52995	GATAAAATTTTAAACTGACAGTAAGAGTGGCAAGAACAGTATGGGGAAACGCTAC	G	.	PASS	AC=528;AF=0.139868;AFR_AF=0.1047;AMR_AF=0.126;AN=3775;CS=DEL_pindel;EAS_AF=0.1911;END=3973917;EUR_AF=0.1227;NS=2504;SAS_AF=0.163;SVTYPE=DEL	GT	0
X	3982951	UW_VH_20248	G	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=0,269;CIPOS=-270,0;CS=DEL_union;EAS_AF=0;END=3990937;EUR_AF=0.0052;MC=YL_CN_ACB_5013,BI_GS_DEL1_B4_P2901_93;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	4025923	DEL_pindel_52997	ATGGCCCCCAAAGATGCCCACATCTTAATCCCCACATGGTAGACGAAATAAT	A	.	PASS	AC=1234;AF=0.326887;AFR_AF=0.3101;AMR_AF=0.3359;AN=3775;CS=DEL_pindel;EAS_AF=0.3089;END=4025974;EUR_AF=0.3303;NS=2504;SAS_AF=0.3593;SVTYPE=DEL	GT	1
X	4055996	ALU_umary_ALU_12550	T	<INS:ME:ALU>	.	PASS	AC=26;AF=0.00688742;AFR_AF=0.0259;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CAGTCGTATTTTT	GT	0
X	4116403	DEL_pindel_52998	CAATAGGTAATTTTTTAATTCTCTCCCTCCTCCCACCCTTCACCCTCAAGTAGACCCTTCTGTCTGTTGTTCCCTTCTTTGTGTCCACGTGTGCTCAATGTTTCGATCCCACTTAT	C	.	PASS	AC=1285;AF=0.340397;AFR_AF=0.334;AMR_AF=0.313;AN=3775;CS=DEL_pindel;EAS_AF=0.3639;END=4116518;EUR_AF=0.3068;NS=2504;SAS_AF=0.3802;SVTYPE=DEL	GT	1
X	4135699	DEL_pindel_53000	GTACTTCATTTTTTTTTTGTTTTTTTCAAATGAGCAATTGGGTTTTCAAGTAGTGAGTTCAGGGGTCTAACACTGGATAAAGACAGGTTTTTTTGTTTGTTTTTGTTTCATCCAAT	G	.	PASS	AC=1255;AF=0.33245;AFR_AF=0.3649;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.305;END=4135814;EUR_AF=0.3107;NS=2504;SAS_AF=0.3565;SVTYPE=DEL	GT	1
X	4172222	ALU_umary_ALU_12551	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa1_1,8,281,-;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=null	GT	0
X	4233776	BI_GS_DEL1_B5_P2902_210	T	<CN0>	100	PASS	AC=241;AF=0.198146;AFR_AF=0.2961;AMR_AF=0.1508;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1767;END=4234935;EUR_AF=0.1397;MC=UW_VH_8374;NS=2504;SAS_AF=0.1811;SVTYPE=DEL	GT	.
X	4234416	DEL_pindel_53002	AATTTTTATTTTTTATTTTTTAAATTTATTTTTCCTACACAGAAGTCTTTGTCAAAGCTGCGTTTATTGGTGGAAGAAATGAATTTTTGAGGTGTCTCTTTGTTTTGCAAAGTGATGACAGGGAAACAAAGATCAACCAAAGCACTTTTGAAAAATTTGGCAACCCCACTTCTAAGAATGAGGCCAGGTTGGGCTGAGAACCCTCATTCCAGGGAAACTAGTGGGTGACCGAGTTGAGTGGCTATAATCACTTCAGTCCAGGAAAAGCAGTCAATGAGAGAGATGTTCTGCCATGATCACCTCTATCCAGGGAAACTAATCCATGGTGGAGATGGTGGTCCCTGATCACTTCAGCCCTGGAAAAGCAGTCCATAATCACTAAGGCAGGCTGTGCTTGCTTCGGCCCAGGGGACACAATGATGAGGGACCTAGAATGTTTATTCCTAGTTGATGATAAGTGCACATAGTTACTTGAGTTACTCATTTTCAGAAAGGTTTATGCCTGCTTAGAAAAAATTCTCATGTTTAAGAAAACGTGTAGGATCAGTAGTATGTGAGTGGGCTTTCTGTTGTTGGATCTCTATAATTTTGAACTTTTGCATTCAATCAGGGAGGGTTACTGTAGGCCAAACCTCCAGTGAAGGCTGGTTCTGTGTTTTTCCATGGTATTGATTGTG	A	.	PASS	AC=915;AF=0.242384;AFR_AF=0.2363;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2474;END=4235092;EUR_AF=0.235;NS=2504;SAS_AF=0.2604;SVTYPE=DEL	GT	1
X	4236802	UW_VH_14867	T	<CN0>	100	PASS	AC=20;AF=0.00768212;AFR_AF=0.0199;AMR_AF=0.0076;AN=2542;CIEND=0,301;CIPOS=-196,0;CS=DEL_union;EAS_AF=0;END=4251464;EUR_AF=0.0065;MC=BI_GS_DEL1_B3_P2902_13,YL_CN_ASW_4496;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	4327018	ALU_umary_ALU_12552	T	<INS:ME:ALU>	.	PASS	AC=74;AF=0.0196027;AFR_AF=0.0668;AMR_AF=0.0134;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb5,10,269,-;NS=2504;SAS_AF=0;SVLEN=259;SVTYPE=ALU;TSD=CACCACAGTATTTATT	GT	0
X	4379954	DEL_pindel_53006	GAAGTCATTGTACAAGGAAAACATTCTGTATGCACTAAGATTTCCCAAAAGAT	G	.	PASS	AC=1605;AF=0.425166;AFR_AF=0.326;AMR_AF=0.4332;AN=3775;CS=DEL_pindel;EAS_AF=0.3783;END=4380006;EUR_AF=0.5744;NS=2504;SAS_AF=0.4485;SVTYPE=DEL	GT	1
X	4382172	UW_VH_22178	T	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,174;CIPOS=-219,0;CS=DEL_union;EAS_AF=0;END=4392070;EUR_AF=0.0052;MC=BI_GS_DEL1_B5_P2902_330;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	4659604	L1_umary_LINE1_2997	T	<INS:ME:LINE1>	.	PASS	AC=431;AF=0.114172;AFR_AF=0.2443;AMR_AF=0.1412;AN=3775;CS=L1_umary;EAS_AF=0.0223;EUR_AF=0.1057;MEINFO=LINE1,4569,6014,-;NS=2504;SAS_AF=0.0195;SVLEN=1445;SVTYPE=LINE1;TSD=TT	GT	0
X	4718495	ALU_umary_ALU_12553	C	<INS:ME:ALU>	.	PASS	AC=9;AF=0.00238411;AFR_AF=0.009;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	4763225	BI_GS_DEL1_B2_P2902_330	G	<CN0>	100	PASS	AC=9;AF=0.00291391;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-31,32;CIPOS=-31,32;CS=DEL_union;EAS_AF=0.0013;END=4782111;EUR_AF=0.0052;MC=YL_CN_LWK_4136,UW_VH_22532,UW_VH_13534;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	4916708	ALU_umary_ALU_12554	T	<INS:ME:ALU>	.	PASS	AC=70;AF=0.018543;AFR_AF=0.0199;AMR_AF=0.0229;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0366;MEINFO=AluUndef,1,268,-;NS=2504;SAS_AF=0.0139;SVLEN=267;SVTYPE=ALU;TSD=ACATCTTAGATTCTTCTT	GT	0
X	4952559	BI_GS_DEL1_B3_P2902_37	T	<CN0>	100	PASS	AC=8;AF=0.00476821;AFR_AF=0.008;AMR_AF=0.0019;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0;END=4956915;EUR_AF=0.0091;MC=YL_CN_GWD_5791,UW_VH_16447;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	4953842	ALU_umary_ALU_12555	T	<INS:ME:ALU>	.	PASS	AC=107;AF=0.0283444;AFR_AF=0.0528;AMR_AF=0.0382;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.03;MEINFO=AluUndef,4,274,-;NS=2504;SAS_AF=0.0153;SVLEN=270;SVTYPE=ALU;TSD=TTAAATGTTT	GT	0
X	5055345	BI_GS_DEL1_B1_P2903_17	T	<CN0>	100	PASS	AC=1949;AF=0.766887;AFR_AF=0.7976;AMR_AF=0.9389;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4136;END=5057501;EUR_AF=0.8916;MC=YL_CN_CHS_4683,YL_CN_ITU_4627,UW_VH_2184,YL_CN_CEU_5383,EM_DL_DEL104008,YL_CN_CDX_3789,YL_CN_MSL_3982;NS=2504;SAS_AF=0.8412;SVTYPE=DEL	GT	.
X	5159449	UW_VH_2773	T	<CN0>	100	PASS	AC=81;AF=0.032053;AFR_AF=0.003;AMR_AF=0.0363;AN=2542;CIEND=0,327;CIPOS=-291,0;CS=DEL_union;EAS_AF=0;END=5164202;EUR_AF=0.107;MC=BI_GS_DEL1_B5_P2903_114,EM_DL_DEL104012,YL_CN_ITU_4628,YL_CN_MXL_3707;NS=2504;SAS_AF=0.0237;SVTYPE=DEL	GT	.
X	5206767	DEL_pindel_53019	TACAGAGTGCTGATTGGTCCATTTTTACAGAGTGCTGATTGGTGCATTTACAATCTTTTAGCTAGAC	T	.	PASS	AC=332;AF=0.087947;AFR_AF=0.0788;AMR_AF=0.0916;AN=3775;CS=DEL_pindel;EAS_AF=0.0982;END=5206833;EUR_AF=0.1084;NS=2504;SAS_AF=0.0655;SVTYPE=DEL	GT	0
X	5361806	BI_GS_DEL1_B4_P2903_41	A	<CN0>	100	PASS	AC=32;AF=0.0487417;AFR_AF=0.0568;AMR_AF=0.0324;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0471;END=5363114;EUR_AF=0.0574;MC=UW_VH_12101;NS=2504;SAS_AF=0.0418;SVTYPE=DEL	GT	.
X	5449318	DUP_gs.X_CNV_X_5449318_5477338	T	<CN0>,<CN2>	.	PASS	AC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=5477338;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0056;SVTYPE=DUP	GT	0
X	5481647	YL_CN_CLM_3811	T	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=5496689;EUR_AF=0.0065;MC=BI_GS_DEL1_B5_P2903_377;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	5538006	DEL_pindel_53027	TCAAATGCATAAAGTAAAATCTAACAGTTTGGAAAGAAGAAATAAGCAAATCTAAAATTG	T	.	PASS	AC=525;AF=0.139073;AFR_AF=0.1157;AMR_AF=0.1202;AN=3775;CS=DEL_pindel;EAS_AF=0.1728;END=5538065;EUR_AF=0.1384;NS=2504;SAS_AF=0.1504;SVTYPE=DEL	GT	1
X	5570336	DEL_pindel_53028	CAATACCACCGAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAATAAAAATAAAAATAAAATAAAAAATAAAAAATAAAATAAAA	C	.	PASS	AC=2412;AF=0.63894;AFR_AF=0.6281;AMR_AF=0.6298;AN=3775;CS=DEL_pindel;EAS_AF=0.606;END=5570680;EUR_AF=0.6227;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7131;SVTYPE=DEL_ALU	GT	0
X	5653213	UW_VH_21209	G	<CN0>	100	PASS	AC=48;AF=0.108344;AFR_AF=0.0937;AMR_AF=0.1069;AN=2542;CIEND=0,186;CIPOS=-161,0;CS=DEL_union;EAS_AF=0.1401;END=5654540;EUR_AF=0.1097;NS=2504;SAS_AF=0.0947;SVTYPE=DEL	GT	.
X	5700930	BI_GS_DEL1_B3_P2903_29	C	<CN0>	100	PASS	AC=11;AF=0.0418543;AFR_AF=0.0339;AMR_AF=0.0477;AN=2542;CIEND=-7,8;CIPOS=-7,8;CS=DEL_union;EAS_AF=0.0432;END=5702199;EUR_AF=0.0431;NS=2504;SAS_AF=0.046;SVTYPE=DEL	GT	.
X	5736335	UW_VH_6506	T	<CN0>	100	PASS	AC=23;AF=0.0590728;AFR_AF=0.0598;AMR_AF=0.0553;AN=2542;CIEND=0,305;CIPOS=-264,0;CS=DEL_union;EAS_AF=0.0641;END=5737554;EUR_AF=0.0574;MC=BI_GS_DEL1_B4_P2903_92;NS=2504;SAS_AF=0.0571;SVTYPE=DEL	GT	.
X	5737304	DEL_pindel_53032	TCTTTGGCTTGCTCATGAGGTACTTTTGTTGAGTACACCCCTGTATTTATTGAGATATAATTTATGAATAAAATTGTGTGCAATGTGATTCTTATATAAGCATCACACTACACACCTTAAATTTATACACACACAACTATGAGTATTTTCTGACCCCAGCCCTAGATTCAGC	T	.	PASS	AC=739;AF=0.195762;AFR_AF=0.1785;AMR_AF=0.2156;AN=3775;CS=DEL_pindel;EAS_AF=0.199;END=5737475;EUR_AF=0.2063;NS=2504;SAS_AF=0.1908;SVTYPE=DEL	GT	1
X	5739550	DEL_pindel_53033	CGCAGGGACATGAAGATGGGAACAATATGAACTGCCGTCTACTAGGGGTCAGGGAGGGAGGGGGACAAGGGTTGAAAAACTACCTATTGGGTACTATGCCCAGTACTTGGGTGACAGATTCAATCATGCCACAAACCTCAGCATCACACAACATACCCAGGTAACAAACCCTCACATGTATTCTTGAATACAAAATAAAAATGGAAATTAAAAAAAAATGTGTGTGCTGGGCATCCAGATGGATTTCAAGGATACTCAAATTGTTGGCTAATGGCACTGGTCTGTGGACCTTAGTTTATTTAGAGACAAAATATATGCATGCATTGCTCAAGGTGCCAGCTGTCTCCCATCAGGCAGGTTTTGGATCCT	C	.	PASS	AC=729;AF=0.193113;AFR_AF=0.1276;AMR_AF=0.2004;AN=3775;CS=DEL_pindel;EAS_AF=0.2291;END=5739918;EUR_AF=0.2063;NS=2504;SAS_AF=0.227;SVTYPE=DEL	GT	1
X	5770974	DEL_pindel_53035	TCCCTTCCATCTGTACCTGTCTGTCACCCAAGACAAATCACATCTGGGTTCATCTTTGATCAAGAA	T	.	PASS	AC=1168;AF=0.309404;AFR_AF=0.3041;AMR_AF=0.3111;AN=3775;CS=DEL_pindel;EAS_AF=0.2997;END=5771039;EUR_AF=0.3016;NS=2504;SAS_AF=0.3343;SVTYPE=DEL	GT	1
X	5781754	ALU_umary_ALU_12556	T	<INS:ME:ALU>	.	PASS	AC=514;AF=0.136159;AFR_AF=0.1276;AMR_AF=0.1794;AN=3775;CS=ALU_umary;EAS_AF=0.1034;EUR_AF=0.0953;MEINFO=AluYa5,5,281,-;NS=2504;SAS_AF=0.195;SVLEN=276;SVTYPE=ALU;TSD=TGCTGTATTGTTT	GT	0
X	5913070	DEL_pindel_53039	TATTTTTTATTTTGCTTTGGTTGCTACAATCTTTGTAACAGCTCCTCTAATGAATGAGTCAATACTTTTAATAATCCCTCTCAATGTAGCTATAGTTTTGCAAGAATTTCTCCACCTCTCACTTGGTTAACTGAAGCAAATGCTCTGGTTAAGTATGCAAATCCTATTTAAGAGAAAGGAGTTTCCCATGAAGGCACTGTCCTCTTCTTCCCTTGGGGAGCTTTATACACAAAATTGCCTCTGTGTGCGAAGAGCACAGGAACAGACAGACAG	T	.	PASS	AC=1034;AF=0.273907;AFR_AF=0.2632;AMR_AF=0.2557;AN=3775;CS=DEL_pindel;EAS_AF=0.2696;END=5913342;EUR_AF=0.2768;NS=2504;SAS_AF=0.3036;SVTYPE=DEL	GT	1
X	5981902	BI_GS_DEL2_B2_P0591_1	A	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0;END=6094156;EUR_AF=0.0065;MC=YL_CN_ACB_5016;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	6032455	BI_GS_DEL1_B3_P2904_3	T	<CN0>	100	PASS	AC=13;AF=0.00662252;AFR_AF=0.012;AMR_AF=0.0134;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0013;END=6035561;EUR_AF=0.0065;MC=YL_CN_IBS_4045,UW_VH_8353,EM_DL_DEL104027;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	6098976	ALU_umary_ALU_12557	C	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,9,281,-;NS=2504;SAS_AF=0;SVLEN=272;SVTYPE=ALU;TSD=null	GT	0
X	6172055	DUP_gs.X_CNV_X_6172055_6253928	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=6253928;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	6280643	ALU_umary_ALU_12558	T	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,11,280,-;NS=2504;SAS_AF=0.0028;SVLEN=269;SVTYPE=ALU;TSD=null	GT	0
X	6289424	DUP_gs.X_CNV_X_6289424_6441948	G	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=6441948;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	6304132	UW_VH_21195	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,125;CIPOS=-188,0;CS=DEL_union;EAS_AF=0.0013;END=6314759;EUR_AF=0.0052;MC=YL_CN_CHB_4605;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	6304187	DUP_gs.X_CNV_X_6304187_6314903	G	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=6314903;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	6338280	DUP_gs.X_CNV_X_6338280_6349405	T	<CN0>,<CN2>	.	PASS	AC=0,4;AF=0,0.0010596;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=6349405;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	6450536	DUP_gs.X_CNV_X_6450536_6466660	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=6466660;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	6546090	DEL_pindel_53045	GTATATGTGCATATACATGTATAGGTATATATGCATGTGTATGTATATATACATGCATGTACATACATATATATGTATATGTACATACATACA	G	.	PASS	AC=570;AF=0.150993;AFR_AF=0.1077;AMR_AF=0.1794;AN=3775;CS=DEL_pindel;EAS_AF=0.1715;END=6546182;EUR_AF=0.1527;NS=2504;SAS_AF=0.1671;SVTYPE=DEL	GT	1
X	6553786	YL_CN_KHV_4961	T	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=6810498;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	6587841	DEL_pindel_53046	GGATGGATGGATGGATGGATGGATGGAGAGTGAGTGGATGAATGCAGGAATTGATGAATGAATGCATGGACAGATGTATAGAAGAGTGGAATGTAAGAATCAATGAAGACATGGGTGAATAAATAGGTAGATGGATTGACAGAGGAAACAGGTGTGGATAGAT	G	.	PASS	AC=186;AF=0.0492715;AFR_AF=0.0349;AMR_AF=0.0592;AN=3775;CS=DEL_pindel;EAS_AF=0.0654;END=6588003;EUR_AF=0.0548;NS=2504;SAS_AF=0.039;SVTYPE=DEL	GT	0
X	6595308	BI_GS_DEL2_B5_P0591_1	C	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-6,6;CIPOS=-6,6;CS=DEL_union;EAS_AF=0;END=7515400;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	6726073	BI_GS_DEL1_B2_P2904_338	A	<CN0>	100	PASS	AC=16;AF=0.0341722;AFR_AF=0.0389;AMR_AF=0.0344;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.038;END=6727444;EUR_AF=0.0418;MC=YL_CN_KHV_4962;NS=2504;SAS_AF=0.0153;SVTYPE=DEL	GT	.
X	6744655	YL_CN_FIN_4262	A	<CN0>	100	PASS	AC=14;AF=0.00423841;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=6829033;EUR_AF=0.0104;MC=BI_GS_DEL1_B1_P2904_487,UW_VH_4709;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	6805783	BI_GS_DEL1_B3_P2904_21	A	<CN0>	100	PASS	AC=12;AF=0.00423841;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.0013;END=6814540;EUR_AF=0.0104;MC=YL_CN_MSL_3984;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	6920132	BI_GS_DEL1_B4_P2904_121	A	<CN0>	100	PASS	AC=15;AF=0.00556291;AFR_AF=0.013;AMR_AF=0.0019;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=6936637;EUR_AF=0.0078;MC=YL_CN_ASW_4500;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	7167702	UW_VH_4899	A	<CN0>	100	PASS	AC=22;AF=0.0574834;AFR_AF=0.0668;AMR_AF=0.0496;AN=2542;CIEND=0,339;CIPOS=-348,0;CS=DEL_union;EAS_AF=0.055;END=7168924;EUR_AF=0.0574;MC=BI_GS_DEL1_B1_P2905_125;NS=2504;SAS_AF=0.0529;SVTYPE=DEL	GT	.
X	7208548	L1_umary_LINE1_2998	A	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=LINE1,5418,6008,+;NS=2504;SAS_AF=0;SVLEN=590;SVTYPE=LINE1;TSD=null	GT	0
X	7208889	BI_GS_DEL1_B3_P2905_5	G	<CN0>	100	PASS	AC=7;AF=0.00980132;AFR_AF=0.008;AMR_AF=0.0115;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.0039;END=7211376;EUR_AF=0.0209;MC=YL_CN_GWD_5793;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	7286803	BI_GS_DEL1_B1_P2905_218	T	<CN0>	100	PASS	AC=9;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-43,43;CIPOS=-43,43;CS=DEL_union;EAS_AF=0;END=7311421;EUR_AF=0.0078;MC=YL_CN_GBR_4481;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	7318688	BI_GS_DEL2_B4_P0591_1	G	<CN0>	100	PASS	AC=9;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0;END=7495426;EUR_AF=0.0091;MC=YL_CN_CEU_5386;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	7487044	DUP_gs.X_CNV_X_7487044_7586777	A	<CN0>,<CN2>	.	PASS	AC=2,3;AF=0.0005298,0.0007947;AFR_AF=0.002,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=7586777;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	7492456	L1_umary_LINE1_2999	T	<INS:ME:LINE1>	.	PASS	AC=48;AF=0.0127152;AFR_AF=0.0439;AMR_AF=0.0076;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3148,6018,-;NS=2504;SAS_AF=0;SVLEN=2870;SVTYPE=LINE1;TSD=TTATTGTATGCTT	GT	0
X	7501257	DUP_gs.X_CNV_X_7501257_7621795	T	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=7621795;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	7579206	BI_GS_DEL1_B5_P2905_542	C	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0;END=7601961;EUR_AF=0.0078;MC=UW_VH_23065,YL_CN_LWK_4144;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	7619445	BI_GS_DEL1_B4_P2905_81	A	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-42,43;CIPOS=-42,43;CS=DEL_union;EAS_AF=0.0013;END=7679429;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	7711105	L1_umary_LINE1_3000	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2777,3053,-;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=LINE1;TSD=null	GT	0
X	7727698	ALU_umary_ALU_12559	C	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYa3_1,1,216,+;NS=2504;SAS_AF=0;SVLEN=215;SVTYPE=ALU;TSD=null	GT	0
X	7761191	ALU_umary_ALU_12560	T	<INS:ME:ALU>	.	PASS	AC=17;AF=0.00450331;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0223;EUR_AF=0;MEINFO=AluUndef,5,281,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null	GT	0
X	7798705	L1_umary_LINE1_3001	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,4890,5937,-;NS=2504;SAS_AF=0;SVLEN=1047;SVTYPE=LINE1;TSD=null	GT	0
X	7838340	YL_CN_GWD_5794	T	<CN0>	100	PASS	AC=10;AF=0.00317881;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=7956724;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	7932146	BI_GS_DEL1_B3_P2905_32	C	<CN0>	100	PASS	AC=14;AF=0.00503311;AFR_AF=0.012;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=7944040;EUR_AF=0.0078;MC=UW_VH_14868,YL_CN_ACB_5018;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	8024056	ALU_umary_ALU_12561	A	<INS:ME:ALU>	.	PASS	AC=26;AF=0.00688742;AFR_AF=0.0259;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=AAAAAATCAAGAGTA	GT	0
X	8084563	YL_CN_CDX_3790	G	<CN0>	100	PASS	AC=9;AF=0.0156291;AFR_AF=0.0179;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0183;END=8088175;EUR_AF=0.0235;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	8114725	L1_umary_LINE1_3002	C	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3600,5869,+;NS=2504;SAS_AF=0.0014;SVLEN=2269;SVTYPE=LINE1;TSD=null	GT	0
X	8122956	DEL_pindel_53061	TAACATGGTGAAACCCTGTCTCTACTAAAAAATACAACAAAAATTAGCTGGGTGTGGTGGTGGGCTCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGACATGAACCCGGGAGGCAGAGCTTGTAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTGTCTCAAAAAAGATAAAAAAGAAAATCCTTTTCCAAATGATGGAATATAGTAACAGAAAACAGAATCCCTACTTTAGTGCTAGAGAGATAGTTTATTTTTCAAGGTCATGTGACACTTACCGAATACTCTTAAAATTGTAAGCAAATAACATCTAGATTTTGCCGAGAGCTCCAACTTTGCAAGCGTGCATAAAAAGCCTCTGTTTCTTCCTAAGTCAAAGAATGGAAGACAGAGCCCTGGAGTGTCTGGGAGATACTTATTCTACATGTGCCAGGTGCTTAGTGCCCAGGCAACTGGTTAGAATCAAGTTAACCTCAATTCGTTTTCCATCAATGATTCTGGAATTTCTATGAAAACAGTTGACCTGGAGACCCCAGTAGTTGCTGAAGAAATCTGGGCTTTCAATCATCTCCTACTTTTGACTCCAGTCTATTCCAGAACTAGGCATTTAGCCTCTATTATGAATACTCTCCTCACTGGCAAAGAAAAGGAGGTGGGTAATGATTACCTAAACTTCAGAGCTAACTATAAGCATAATTTGTGGCCAGGTGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACTTGCGGCCAGGAGTTCTAGACCAGCCTGGCC	T	.	PASS	AC=889;AF=0.235497;AFR_AF=0.2024;AMR_AF=0.2462;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=8123780;EUR_AF=0.2311;NS=2504;SAS_AF=0.2618;SVTYPE=DEL	GT	1
X	8149287	ALU_umary_ALU_12562	T	<INS:ME:ALU>	.	PASS	AC=32;AF=0.00847682;AFR_AF=0.0319;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CTCATTAAATATTTTTT	GT	0
X	8171202	BI_GS_DEL1_B3_P2906_6	A	<CN0>	100	PASS	AC=13;AF=0.00476821;AFR_AF=0.013;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0;END=8179574;EUR_AF=0.0065;MC=UW_VH_17180,YL_CN_ESN_4373;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	8197961	YL_CN_FIN_4263	C	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=8349082;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	8290447	UW_VH_11778	T	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,238;CIPOS=-258,0;CS=DEL_union;EAS_AF=0.0039;END=8335335;EUR_AF=0.0065;MC=YL_CN_CDX_3792,BI_GS_DEL1_B2_P2906_115;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	8374863	DUP_gs.X_CNV_X_8374863_8456441	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=8456441;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	8414134	DUP_gs.X_CNV_X_8414134_8429188	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=8429188;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	8456074	DEL_pindel_53069	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTACCTATCCATCTATTTGTATCTATCTATCTATCTATATCTGTCTATCTGTCTCTCTGTCTATCTATCTGTCTGTCTCTCTATTTGTCTGTCTGGCTGGCTTGCTGGCTGGCTATCGTTTGTCTATCTATCTGTGGATCTGTCTGTCTAACTATCTTTCTGTCTATCTGTCTATCTATCTGTCTATCTGTCTGCCTATCTGTCTATTTGTCTGACTGGCTGGCTGGCTATCTATCTATCTATCTATCTATCTATC	T	.	PASS	AC=750;AF=0.198675;AFR_AF=0.2004;AMR_AF=0.208;AN=3775;CS=DEL_pindel;EAS_AF=0.1846;END=8456371;EUR_AF=0.1828;NS=2504;SAS_AF=0.2214;SVTYPE=DEL	GT	0
X	8580581	DEL_pindel_53070	TAAAACAAGAAGTTTTTTTTTTTTTTTTTAAAGAAGCACTAAAATTGACAAAATTCTATTGGGATGAATCAAG	T	.	PASS	AC=1050;AF=0.278146;AFR_AF=0.2542;AMR_AF=0.2786;AN=3775;CS=DEL_pindel;EAS_AF=0.2762;END=8580653;EUR_AF=0.2833;NS=2504;SAS_AF=0.3078;SVTYPE=DEL	GT	0
X	8644055	DUP_gs.X_CNV_X_8644055_8681405	C	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=8681405;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	8675984	DEL_pindel_53071	TGGCCAGGCATGGTGGCACACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTG	T	.	PASS	AC=592;AF=0.156821;AFR_AF=0.1037;AMR_AF=0.1737;AN=3775;CS=DEL_pindel;EAS_AF=0.1728;END=8676042;EUR_AF=0.1723;NS=2504;SAS_AF=0.1852;SVTYPE=DEL	GT	0
X	8709374	UW_VH_17803	A	<CN0>	100	PASS	AC=79;AF=0.11947;AFR_AF=0.1196;AMR_AF=0.1221;AN=2542;CIEND=0,266;CIPOS=-145,0;CS=DEL_union;EAS_AF=0.1361;END=8710380;EUR_AF=0.1149;NS=2504;SAS_AF=0.1045;SVTYPE=DEL	GT	.
X	8786514	UW_VH_3170	A	<CN0>	100	PASS	AC=65;AF=0.034702;AFR_AF=0.016;AMR_AF=0.0496;AN=2542;CIEND=0,324;CIPOS=-326,0;CS=DEL_union;EAS_AF=0.0079;END=8788914;EUR_AF=0.0914;MC=YL_CN_PJL_4997,YL_CN_CEU_5387;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	.
X	8839235	BI_GS_DEL1_B2_P2906_395	G	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.0026;END=8857520;EUR_AF=0.0052;MC=YL_CN_KHV_4966;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	8878375	DEL_pindel_53075	CTAGGGTCCCTAAGCAATGATCACCTGTAGAGTCCCTGAATGATGATCACTTG	C	.	PASS	AC=126;AF=0.0333775;AFR_AF=0.0229;AMR_AF=0.0305;AN=3775;CS=DEL_pindel;EAS_AF=0.0406;END=8878427;EUR_AF=0.0457;NS=2504;SAS_AF=0.0292;SVTYPE=DEL	GT	0
X	8948436	DEL_pindel_53077	CCCCTGCTTCAGCAAAGATATCCCAAGTCACTCACTGTCAAAATTAATAGAATTGA	C	.	PASS	AC=929;AF=0.246093;AFR_AF=0.2074;AMR_AF=0.2462;AN=3775;CS=DEL_pindel;EAS_AF=0.2644;END=8948491;EUR_AF=0.2311;NS=2504;SAS_AF=0.2967;SVTYPE=DEL	GT	1
X	8964831	BI_GS_DEL1_B1_P2906_600	T	<CN0>	100	PASS	AC=14;AF=0.0222517;AFR_AF=0.0189;AMR_AF=0.0153;AN=2542;CIEND=-18,18;CIPOS=-18,18;CS=DEL_union;EAS_AF=0.0314;END=8967243;EUR_AF=0.0248;NS=2504;SAS_AF=0.0195;SVTYPE=DEL	GT	.
X	9066905	DEL_pindel_53079	CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTT	C	.	PASS	AC=1002;AF=0.26543;AFR_AF=0.2473;AMR_AF=0.2748;AN=3775;CS=DEL_pindel;EAS_AF=0.2631;END=9066962;EUR_AF=0.2533;NS=2504;SAS_AF=0.2994;SVTYPE=DEL	GT	1
X	9116092	ALU_umary_ALU_12563	G	<INS:ME:ALU>	.	PASS	AC=5;AF=0.0013245;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0065;EUR_AF=0;MEINFO=AluUndef,4,281,+;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null	GT	0
X	9135425	BI_GS_DEL1_B1_P2907_103	G	<CN0>	100	PASS	AC=23;AF=0.0598675;AFR_AF=0.0618;AMR_AF=0.0782;AN=2542;CIEND=-42,43;CIPOS=-42,43;CS=DEL_union;EAS_AF=0.0471;END=9136655;EUR_AF=0.0587;NS=2504;SAS_AF=0.0585;SVTYPE=DEL	GT	.
X	9174424	ALU_umary_ALU_12564	T	<INS:ME:ALU>	.	PASS	AC=25;AF=0.00662252;AFR_AF=0.0229;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=GACGAGGTCTTTT	GT	0
X	9385298	ALU_umary_ALU_12565	G	<INS:ME:ALU>	.	PASS	AC=8;AF=0.00211921;AFR_AF=0.008;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,279,+;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	9483027	DEL_pindel_53088	GAAGGCAGATGTTATCAGGAGTTAAAATGTGATGTGTGTACCGCTCATGTGTGTATGGGGTGTGCTCCTTTTGTTTTTGATGCTGAAATGAGACAAATCATTTCCCTTTTAAGCTCCAGGCAGACTGATGGAGGGGGGAAAAATAACACCCAACTTACTGCAACCTGAAATCCTTTGCCTTGGATCCACTTCCTAAGTTCCTATAGTCCTTATTTTATAAACTGATAAAACAACTTTTCTCTCTCAAGTGATGATCATCTTGTGTTTTACACTAATTAAGCCCATATACACCTCCCTTTGGAATTCCTTCTTCTGATCTGCTTGGCCTGTTTGCCAGTTAGTCGCCTTACTAGGAGAATCAAAATGTAAACTCATAATAGACAGGAACCCAACATCATCAGCACAGGATGTGGCAGAATGATTTTTCTTTCCCACCTCTTGCTGAGAAGGCAATGAGATTGGAAATGGCAAACACCCCAGAGTTCTGTAACTCTGAGTGTGGAAGAGGAGGTGGCAGCCCTTGACCTCAGTAGCGGAGCCAGATCATCGAACATCCCCGTCCAGGAATCTGGACATGCACTGGTCAAGAATTCAGCACAATTTCCTTTGGTCTGGGGATTGGGAAGCTCTTTTTGTGAGTGAGGCATGGAGTGAAATTGCAGAAGCCTGCGTGACTTGTAGAAACCGAAGCCAGGCTCGTTTACTGCCTTGCACAAGGGAGATATGATAAGACAGAATTTATTTGTGAGTGTCGTCGATGCCAAGGAGCCTGTCCAACATTTATAGAGGCTTTTGGGCTAAACGAAA	G	.	PASS	AC=675;AF=0.178808;AFR_AF=0.1446;AMR_AF=0.1947;AN=3775;CS=DEL_pindel;EAS_AF=0.1885;END=9483833;EUR_AF=0.1841;NS=2504;SAS_AF=0.1992;SVTYPE=DEL	GT	1
X	9516444	NUMT_umich_MERGED_NUMT_202	T	<INS:MT>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.001;AMR_AF=0.0019;AN=3775;CIEND=-5,0;CIPOS=0,5;CS=NUMT_umich;EAS_AF=0;END=9516448;EUR_AF=0;MEND=12290;MLEN=138;MSTART=12153;NS=2504;SAS_AF=0;SVTYPE=INS	GT	0
X	9553829	UW_VH_15531	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,52;CIPOS=-287,0;CS=DEL_union;EAS_AF=0;END=9559221;EUR_AF=0.0039;MC=BI_GS_DEL1_B3_P2907_14,YL_CN_GWD_5797;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	9577278	ALU_umary_ALU_12566	G	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,20,269,+;NS=2504;SAS_AF=0;SVLEN=249;SVTYPE=ALU;TSD=null	GT	0
X	9653719	DEL_pindel_53092	CAAAGTAATAATATCCTGTTCTCTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTT	C	.	PASS	AC=1056;AF=0.279735;AFR_AF=0.2732;AMR_AF=0.2691;AN=3775;CS=DEL_pindel;EAS_AF=0.2709;END=9653775;EUR_AF=0.2859;NS=2504;SAS_AF=0.2994;SVTYPE=DEL	GT	0
X	9698247	DEL_pindel_53094	GACTGTATATTGGATGTCCCTTGTGCCCTCAACTGCCTTTCTCAGATCCCCTGAAATCTTTGAAGTCCTAGAACTGAAACCCCAACCAGTGGGCACTGAGCATGAACCATAGAAAACATGACACCTGGCCCAACTCCACTTCAAGGTGTTAAATTTGATCTCGCCAGCTCA	G	.	PASS	AC=2042;AF=0.540927;AFR_AF=0.5892;AMR_AF=0.605;AN=3775;CS=DEL_pindel;EAS_AF=0.6702;END=9698417;EUR_AF=0.3995;NS=2504;SAS_AF=0.4401;SVTYPE=DEL	GT	1
X	9745809	YL_CN_ITU_4633	A	<CN0>	100	PASS	AC=11;AF=0.0235762;AFR_AF=0.0239;AMR_AF=0.0248;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0249;END=9749281;EUR_AF=0.0274;NS=2504;SAS_AF=0.0167;SVTYPE=DEL	GT	.
X	9782060	BI_GS_DEL1_B5_P2907_651	A	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-60,61;CIPOS=-60,61;CS=DEL_union;EAS_AF=0;END=9794962;EUR_AF=0.0065;MC=YL_CN_LWK_4147;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	9805013	DEL_pindel_53099	TGGTGTTCTGTGACTGGCTTTTTGACTCCGCATCATATTTTCGGGATTGATCCACATTGCAGGTGGTATCGGTACTCCATTCCCTTCCGGTGCCAA	T	.	PASS	AC=492;AF=0.130331;AFR_AF=0.0658;AMR_AF=0.166;AN=3775;CS=DEL_pindel;EAS_AF=0.178;END=9805108;EUR_AF=0.1319;NS=2504;SAS_AF=0.1421;SVTYPE=DEL	GT	1
X	9917061	L1_umary_LINE1_3003	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,57,3657,-;NS=2504;SAS_AF=0;SVLEN=3600;SVTYPE=LINE1;TSD=null	GT	0
X	9957233	ALU_umary_ALU_12567	C	<INS:ME:ALU>	.	PASS	AC=8;AF=0.00211921;AFR_AF=0.008;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	9957923	YL_CN_GWD_5798	C	<CN0>	100	PASS	AC=31;AF=0.0145695;AFR_AF=0.0319;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0118;END=9963345;EUR_AF=0.0104;MC=UW_VH_8705,YL_CN_MSL_3987;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	10212230	YL_CN_KHV_4969	T	<CN0>	100	PASS	AC=5;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=10216340;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	10233280	L1_umary_LINE1_3004	T	<INS:ME:LINE1>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0.004;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1026,6014,-;NS=2504;SAS_AF=0;SVLEN=4988;SVTYPE=LINE1;TSD=TTT	GT	0
X	10240308	DEL_pindel_53113	CTGTAGGAAATAAAATTTTAAAAGCTTGCAAAATTAAAAAATAGATTATGACTTGTGCTAAAGTCTTCATTTCCATATA	C	.	PASS	AC=706;AF=0.18702;AFR_AF=0.1805;AMR_AF=0.1908;AN=3775;CS=DEL_pindel;EAS_AF=0.2081;END=10240386;EUR_AF=0.188;NS=2504;SAS_AF=0.1699;SVTYPE=DEL	GT	1
X	10346496	YL_CN_CEU_5390	T	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=10353586;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	10346677	DUP_gs.X_CNV_X_10346677_10353846	A	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=10353846;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	10457093	DEL_pindel_53119	TTTTCAAATCTTTTATGCATTTTGGTGAAAGGCTTGTTTTCTTATTAATGAGTTTTGAGAATTTGTTATATATTCTGGATACAATCCTTTATTAAAATAAATAATTTGTAAATATTTTCGCCTAGTTTGTGGTTGGTCTTTTCAGTCTCTTAACAGTGCATTCTGAAGAGGTTTTTAATTTTGATGAAACCCAACATATAAATATTTTCTTTTATGGATAATGCTTTTGTCATCTGTATGTAAAGAATCTTTGCCTAACCCAAGGTCAAGATCTCCTCCACGTTTTCTTCTAGGAGTTTTACAGCTTTTACCTTTTACATTTAGATATATAATCAATTTTGAGTAAAGTCTTGTATATAATGTGAAGTATGGATCAAACTTCATATTCTTACATACAGATATCCAATTGCTCCAGCACCAGTTACTAAAAAGACAATCCTTTCTCCACTGAAATTGCCTTTGCATCTTTGTTGAAAATCACTTGTCCATATATGTATGAATCTACTTCTCAAGTCTTTTTGCTGATCCTTTGATCTATTTGTCTATCTTTATACAAATACCACCTTATATTGATTTCTGAAGCCTTATAATAAATCTTGAAATCAGCTGATGTTAGTTCTCCAACTTTGTTATTATTTTCAAAGTTTTTTTTTTTTTTTTTGAGACAGAGTCTCTCTCTGTCGCCCGGGCCGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAACTCCGCCTCCCGGATTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCTCCTGCCACCATGTCTGGCTTATTTTTTGTA	T	.	PASS	AC=530;AF=0.140397;AFR_AF=0.1376;AMR_AF=0.145;AN=3775;CS=DEL_pindel;EAS_AF=0.1623;END=10457911;EUR_AF=0.1319;NS=2504;SAS_AF=0.1267;SVTYPE=DEL	GT	0
X	10528860	BI_GS_DEL1_B1_P2908_389	T	<CN0>	100	PASS	AC=219;AF=0.100397;AFR_AF=0.2822;AMR_AF=0.0744;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0144;END=10531081;EUR_AF=0.0326;MC=UW_VH_3087,YL_CN_MSL_3988,YL_CN_PUR_5618,YL_CN_PEL_4312,UW_VH_17096;NS=2504;SAS_AF=0.0292;SVTYPE=DEL	GT	.
X	10552944	YL_CN_GWD_5800	A	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=10558410;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	10571074	L1_umary_LINE1_3005	A	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3635,5214,-;NS=2504;SAS_AF=0;SVLEN=1579;SVTYPE=LINE1;TSD=null	GT	0
X	10684958	BI_GS_DEL1_B3_P2908_22	C	<CN0>	100	PASS	AC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-62,62;CIPOS=-62,62;CS=DEL_union;EAS_AF=0;END=10699980;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	10688701	DUP_gs.X_CNV_X_10688701_10697472	C	<CN0>,<CN2>	.	PASS	AC=1,3;AF=0.0002649,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=10697472;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV	GT	0
X	10695649	BI_GS_DEL1_B2_P2908_389	C	<CN0>	100	PASS	AC=8;AF=0.00450331;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0.0013;END=10701112;EUR_AF=0.0091;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	10713733	ALU_umary_ALU_12568	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,22,263,+;NS=2504;SAS_AF=0;SVLEN=241;SVTYPE=ALU;TSD=null	GT	0
X	10853678	BI_GS_DEL1_B2_P2908_439	T	<CN0>	100	PASS	AC=10;AF=0.00423841;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0079;END=10856143;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	11010862	DEL_pindel_53127	TGGTATGGATTAGACATGAAAATTAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGTGCACCATGTTCTGATTAGCTAAGTAAACTGGAATCAGAAGCCACCTCTGGAGCTTATAGTCCACA	T	.	PASS	AC=1149;AF=0.304371;AFR_AF=0.2861;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.2945;END=11010997;EUR_AF=0.3016;NS=2504;SAS_AF=0.3398;SVTYPE=DEL	GT	1
X	11055259	ALU_umary_ALU_12570	G	<INS:ME:ALU>	.	PASS	AC=16;AF=0.00423841;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0209;EUR_AF=0;MEINFO=AluYa5,1,280,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	11096392	DEL_pindel_53128	TAAAAACTTCTAACTCATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1226;AF=0.324768;AFR_AF=0.3599;AMR_AF=0.313;AN=3775;CS=DEL_pindel;EAS_AF=0.301;END=11096731;EUR_AF=0.2872;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.3496;SVTYPE=DEL_ALU	GT	1
X	11098427	ALU_umary_ALU_12571	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluY,15,280,+;NS=2504;SAS_AF=0;SVLEN=265;SVTYPE=ALU;TSD=null	GT	0
X	11182018	ALU_umary_ALU_12572	C	<INS:ME:ALU>	.	PASS	AC=75;AF=0.0198676;AFR_AF=0.004;AMR_AF=0.0134;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0235;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0641;SVLEN=280;SVTYPE=ALU;TSD=AAAGAAATCAGCAGTC	GT	0
X	11201717	ALU_umary_ALU_12573	G	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,54,278,-;NS=2504;SAS_AF=0.0014;SVLEN=224;SVTYPE=ALU;TSD=null	GT	0
X	11628393	L1_umary_LINE1_3006	T	<INS:ME:LINE1>	.	PASS	AC=61;AF=0.0161589;AFR_AF=0.0588;AMR_AF=0.0038;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5487,6019,-;NS=2504;SAS_AF=0;SVLEN=532;SVTYPE=LINE1;TSD=AAGAAATTAAAACATTTT	GT	0
X	11731977	L1_umary_LINE1_3007	A	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5123,6018,-;NS=2504;SAS_AF=0.0014;SVLEN=895;SVTYPE=LINE1;TSD=TTAGTTTACTCAATTCCATGTGGA	GT	0
X	11830023	DEL_pindel_53146	GTTCTCCAGTACCGCAGGCTCAAATTTGTAATACAATATTGCTCTTTGGTTGTCTAAAGTATATCTCGACATTAACATACCTAGAAGAGAA	G	.	PASS	AC=1035;AF=0.274172;AFR_AF=0.2532;AMR_AF=0.2748;AN=3775;CS=DEL_pindel;EAS_AF=0.2736;END=11830113;EUR_AF=0.2755;NS=2504;SAS_AF=0.3022;SVTYPE=DEL	GT	1
X	11885210	L1_umary_LINE1_3008	C	<INS:ME:LINE1>	.	PASS	AC=7;AF=0.0018543;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0092;EUR_AF=0;MEINFO=LINE1,4413,6019,-;NS=2504;SAS_AF=0;SVLEN=1606;SVTYPE=LINE1;TSD=null	GT	0
X	11932522	DEL_pindel_53147	AAAAGGAGTACTGAGCAGCAAGAAGGGACCATGGCAATTGTGGAAAGTTTGAGCATGCAAGTCTAACTAAAGGCATTTAAACAC	A	.	PASS	AC=185;AF=0.0490066;AFR_AF=0.007;AMR_AF=0.042;AN=3775;CS=DEL_pindel;EAS_AF=0.0877;END=11932605;EUR_AF=0.0509;NS=2504;SAS_AF=0.0696;SVTYPE=DEL	GT	0
X	12033329	ALU_umary_ALU_12574	C	<INS:ME:ALU>	.	PASS	AC=25;AF=0.00662252;AFR_AF=0.0229;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,279,+;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=AAGAATACATGCTACC	GT	0
X	12114294	BI_GS_DEL1_B2_P2910_77	A	<CN0>	100	PASS	AC=62;AF=0.104636;AFR_AF=0.1057;AMR_AF=0.1031;AN=2542;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0.0942;END=12115191;EUR_AF=0.0992;NS=2504;SAS_AF=0.1212;SVTYPE=DEL	GT	.
X	12211890	DEL_pindel_53150	AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAGGGAAGG	A	.	PASS	AC=867;AF=0.229669;AFR_AF=0.2124;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2579;END=12211954;EUR_AF=0.218;NS=2504;SAS_AF=0.2437;SVTYPE=DEL	GT	0
X	12271780	DEL_pindel_53153	TAGTGTAATAATATCTTCAGAGTGCTGGGGGAGAGAGAGAGAAGGGAGGTACAGGTTTCAGG	T	.	PASS	AC=560;AF=0.148344;AFR_AF=0.1157;AMR_AF=0.1489;AN=3775;CS=DEL_pindel;EAS_AF=0.1924;END=12271841;EUR_AF=0.1201;NS=2504;SAS_AF=0.1769;SVTYPE=DEL	GT	0
X	12329843	ALU_umary_ALU_12575	T	<INS:ME:ALU>	.	PASS	AC=10;AF=0.00264901;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0104;MEINFO=AluUndef,2,260,-;NS=2504;SAS_AF=0.0028;SVLEN=258;SVTYPE=ALU;TSD=null	GT	0
X	12380576	BI_GS_DEL1_B3_P2910_15	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=12394209;EUR_AF=0.0052;MC=YL_CN_GWD_5802,UW_VH_16065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	12384710	L1_umary_LINE1_3009	G	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4524,5744,+;NS=2504;SAS_AF=0.0028;SVLEN=1220;SVTYPE=LINE1;TSD=null	GT	0
X	12434234	BI_GS_DEL1_B4_P2910_84	C	<CN0>	100	PASS	AC=21;AF=0.0296689;AFR_AF=0.0269;AMR_AF=0.0267;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0314;END=12436825;EUR_AF=0.0418;MC=UW_VH_4163;NS=2504;SAS_AF=0.0209;SVTYPE=DEL	GT	.
X	12466523	BI_GS_DEL1_B1_P2910_360	A	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-8,9;CIPOS=-8,9;CS=DEL_union;EAS_AF=0;END=12483859;EUR_AF=0.0078;MC=YL_CN_FIN_4270;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	12490969	BI_GS_DEL1_B5_P2910_475	A	<CN0>	100	PASS	AC=295;AF=0.278411;AFR_AF=0.3599;AMR_AF=0.2863;AN=2542;CIEND=-18,18;CIPOS=-18,18;CS=DEL_union;EAS_AF=0.2225;END=12492265;EUR_AF=0.2493;NS=2504;SAS_AF=0.2493;SVTYPE=DEL	GT	.
X	13122187	BI_GS_DEL1_B2_P2911_74	A	<CN0>	100	PASS	AC=11;AF=0.00556291;AFR_AF=0.014;AMR_AF=0.0057;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=13125909;EUR_AF=0.0039;MC=YL_CN_ASW_4509,UW_VH_12915;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	13167642	ALU_umary_ALU_12576	T	<INS:ME:ALU>	.	PASS	AC=6;AF=0.0015894;AFR_AF=0.006;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	13205696	DEL_pindel_53154	ATTGTTAATCTCTTACTATGCCTAATTTATGAATTAAACTTTATCATGGGTATGTATGTACAAGAAAAAAACAATGTATATATATATATGGTTTGGTACTATCCAT	A	.	PASS	AC=1159;AF=0.30702;AFR_AF=0.2981;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.301;END=13205801;EUR_AF=0.2924;NS=2504;SAS_AF=0.3496;SVTYPE=DEL	GT	1
X	13216928	DEL_pindel_53155	AAATAGCAGGCCCTGAAAGAAATCAAAGTATTTTACGCCAAAATATATTTCTTTGACATATTTTGAAATGGCCCTAAAAAGCTGTCTCTTGTGGGGAAAATTTACGTTCTGCAGAGAATGCCCTTCTCTTCCCAGGTCTTTTCCTGATCCAGGAAAGATTAACTAAGATTATAGCACTTTTTTAGGTTTGGTAAGAGACATTTACCATCGAATCTGTCTGAAGCCTGCTACCTGGAGGCTTCATCTGCATAATAAGAACCTTGGTCTCCACAGCCCTTTACTTTAACCCAGATGCTCCTTTCT	A	.	PASS	AC=432;AF=0.114437;AFR_AF=0.0728;AMR_AF=0.1183;AN=3775;CS=DEL_pindel;EAS_AF=0.1479;END=13217230;EUR_AF=0.1214;NS=2504;SAS_AF=0.1267;SVTYPE=DEL	GT	1
X	13244329	L1_umary_LINE1_3010	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,3299,5310,-;NS=2504;SAS_AF=0;SVLEN=2011;SVTYPE=LINE1;TSD=null	GT	0
X	13319978	ALU_umary_ALU_12577	T	<INS:ME:ALU>	.	PASS	AC=11;AF=0.00291391;AFR_AF=0.011;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,277,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null	GT	0
X	13419363	UW_VH_5823	T	<CN0>	100	PASS	AC=8;AF=0.0193377;AFR_AF=0.015;AMR_AF=0.0286;AN=2542;CIEND=0,172;CIPOS=-214,0;CS=DEL_union;EAS_AF=0.0118;END=13421005;EUR_AF=0.0248;NS=2504;SAS_AF=0.0209;SVTYPE=DEL	GT	.
X	13420981	BI_GS_DEL1_B2_P2911_245	T	<CN0>	100	PASS	AC=92;AF=0.15894;AFR_AF=0.1555;AMR_AF=0.1622;AN=2542;CIEND=-23,23;CIPOS=-23,23;CS=DEL_union;EAS_AF=0.1204;END=13421696;EUR_AF=0.1567;NS=2504;SAS_AF=0.2047;SVTYPE=DEL	GT	.
X	13506501	BI_GS_DEL1_B5_P2911_482	C	<CN0>	100	PASS	AC=10;AF=0.0217218;AFR_AF=0.013;AMR_AF=0.0134;AN=2542;CIEND=-21,22;CIPOS=-21,22;CS=DEL_union;EAS_AF=0.0223;END=13508250;EUR_AF=0.0326;NS=2504;SAS_AF=0.0279;SVTYPE=DEL	GT	.
X	13697604	YL_CN_ITU_4634	A	<CN0>	100	PASS	AC=4;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=13701494;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	13824329	ALU_umary_ALU_12578	T	<INS:ME:ALU>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.0056;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	13829184	DUP_gs.X_CNV_X_13829184_13947990	A	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=13947990;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	13843175	ALU_umary_ALU_12579	T	<INS:ME:ALU>	.	PASS	AC=7;AF=0.0018543;AFR_AF=0.007;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=CTGTGTCTCTTCTT	GT	0
X	13857169	UW_VH_16825	A	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.007;AMR_AF=0;AN=2542;CIEND=0,192;CIPOS=-179,0;CS=DEL_union;EAS_AF=0;END=13863380;EUR_AF=0.0039;MC=BI_GS_DEL1_B3_P2911_17,YL_CN_GWD_5803;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	13872906	BI_GS_DEL1_B5_P2911_849	T	<CN0>	100	PASS	AC=6;AF=0.00609272;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0079;END=13875303;EUR_AF=0.0078;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	13949683	DUP_gs.X_CNV_X_13949683_14156025	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=14156025;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	14022258	ALU_umary_ALU_12580	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,275,-;NS=2504;SAS_AF=0;SVLEN=272;SVTYPE=ALU;TSD=null	GT	0
X	14110172	DUP_gs.X_CNV_X_14110172_14117365	C	<CN0>,<CN2>	.	PASS	AC=3,2;AF=0.0007947,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=14117365;EUR_AF=0,0;NS=2504;SAS_AF=0.0028,0.0014;SVTYPE=CNV	GT	0
X	14110735	YL_CN_CHS_4693	T	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=14140814;EUR_AF=0.0052;MC=BI_GS_DEL1_B1_P2912_80;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	14147644	DUP_gs.X_CNV_X_14147644_14366811	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=14366811;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	14152015	L1_umary_LINE1_3011	T	<INS:ME:LINE1>	.	PASS	AC=628;AF=0.166358;AFR_AF=0.1904;AMR_AF=0.0821;AN=3775;CS=L1_umary;EAS_AF=0.1492;EUR_AF=0.1436;MEINFO=LINE1,4982,6010,-;NS=2504;SAS_AF=0.2368;SVLEN=1028;SVTYPE=LINE1;TSD=TCTCTTTTCTTATT	GT	0
X	14183240	ALU_umary_ALU_12581	A	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluUndef,30,281,+;NS=2504;SAS_AF=0;SVLEN=251;SVTYPE=ALU;TSD=null	GT	0
X	14240900	DEL_pindel_53165	GTATATCTATATATTTATATAGATATACTATATATTTATTTTATAGTATATATTTATATTTA	G	.	PASS	AC=1016;AF=0.269139;AFR_AF=0.2323;AMR_AF=0.2595;AN=3775;CS=DEL_pindel;EAS_AF=0.305;END=14240961;EUR_AF=0.2611;NS=2504;SAS_AF=0.2981;SVTYPE=DEL	GT	1
X	14406055	DEL_pindel_53168	TCACAGATTTCCCCCACTTCTCAAGCTTATACCTTTTGTTTTATTCTATATAAGGAG	T	.	PASS	AC=444;AF=0.117616;AFR_AF=0.0847;AMR_AF=0.126;AN=3775;CS=DEL_pindel;EAS_AF=0.1374;END=14406111;EUR_AF=0.1201;NS=2504;SAS_AF=0.1337;SVTYPE=DEL	GT	1
X	14432731	L1_umary_LINE1_3012	A	<INS:ME:LINE1>	.	PASS	AC=15;AF=0.00397351;AFR_AF=0;AMR_AF=0.0095;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0039;MEINFO=LINE1,4743,5956,-;NS=2504;SAS_AF=0.0097;SVLEN=1213;SVTYPE=LINE1;TSD=TAGA	GT	0
X	14596377	L1_umary_LINE1_3013	G	<INS:ME:LINE1>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,24,5923,-;NS=2504;SAS_AF=0.0042;SVLEN=5899;SVTYPE=LINE1;TSD=null	GT	0
X	14797755	BI_GS_DEL1_B5_P2912_728	A	<CN0>	100	PASS	AC=80;AF=0.0527152;AFR_AF=0.1276;AMR_AF=0.0363;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0353;END=14799414;EUR_AF=0.0209;MC=UW_VH_16732,UW_VH_9717,EM_DL_DEL101164044;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	.
X	14836235	ALU_umary_ALU_12582	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,35,281,+;NS=2504;SAS_AF=0;SVLEN=246;SVTYPE=ALU;TSD=AAAATT	GT	0
X	14917253	ALU_umary_ALU_12583	C	<INS:ME:ALU>	.	PASS	AC=412;AF=0.109139;AFR_AF=0.0299;AMR_AF=0.1202;AN=3775;CS=ALU_umary;EAS_AF=0.0432;EUR_AF=0.2441;MEINFO=AluUndef,1,268,-;NS=2504;SAS_AF=0.1379;SVLEN=267;SVTYPE=ALU;TSD=GAACTAGAAAGTCTTTC	GT	0
X	15050739	ALU_umary_ALU_12584	T	<INS:ME:ALU>	.	PASS	AC=92;AF=0.0243709;AFR_AF=0.0698;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0065;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.0181;SVLEN=280;SVTYPE=ALU;TSD=AACAGCTTGCTTTT	GT	0
X	15105544	BI_GS_DEL1_B2_P2913_55	T	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0;END=15114913;EUR_AF=0.0039;MC=YL_CN_PEL_4316;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	15175768	L1_umary_LINE1_3014	G	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4275,4522,-;NS=2504;SAS_AF=0;SVLEN=247;SVTYPE=LINE1;TSD=null	GT	0
X	15189176	DUP_gs.X_CNV_X_15189176_15292014	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=15292014;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	15238353	DEL_pindel_53179	GCTGTGTTGCTGTTGATTATCATATTGATGATAGCGAAATCACATGGTCACTCCTCAGTTCTTATGTTTTAGAGTTGTTGGTGTACAAGTGGCATTTACATCGCAGGGCTGGATAAGACTACATGGAGGAGAGAGAGACAGAAAGAGAGGGAGAGAACTGAGCCCTTCAAAATTATAAAATCAGGGACATGAATAAAATCATCAAAAGATCCTTCAGTTTGTTGTTCCCTTCTCATGCTGCATATACTCTCTGGGAATT	G	.	PASS	AC=474;AF=0.125563;AFR_AF=0.1127;AMR_AF=0.1584;AN=3775;CS=DEL_pindel;EAS_AF=0.123;END=15238611;EUR_AF=0.1319;NS=2504;SAS_AF=0.1156;SVTYPE=DEL	GT	1
X	15246394	UW_VH_6507	A	<CN0>	100	PASS	AC=17;AF=0.0341722;AFR_AF=0.0249;AMR_AF=0.0382;AN=2542;CIEND=0,332;CIPOS=-323,0;CS=DEL_union;EAS_AF=0.0497;END=15247968;EUR_AF=0.0235;MC=BI_GS_DEL1_B4_P2913_35;NS=2504;SAS_AF=0.039;SVTYPE=DEL	GT	.
X	15347791	DEL_pindel_53181	ACAGGTTTTCAAATAGCACTCAGAAGACACTGTTTTTTATAACCAGACTGTGTCAGACTTTTAGTAAACAAGCCTCCACACATTCAACTGCAGTGTCCATTAAGTGCTGTAGAGGTACAAAAAACAGCCTCCTTGGCCAGGTGCAGTGGCTCACGCCTGTTAATCC	A	.	PASS	AC=840;AF=0.222517;AFR_AF=0.2084;AMR_AF=0.2214;AN=3775;CS=DEL_pindel;EAS_AF=0.2238;END=15347956;EUR_AF=0.2193;NS=2504;SAS_AF=0.2451;SVTYPE=DEL	GT	0
X	15355982	DUP_gs.X_CNV_X_15355982_15361333	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=15361333;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	15419482	ALU_umary_ALU_12585	G	<INS:ME:ALU>	.	PASS	AC=78;AF=0.0206622;AFR_AF=0.0588;AMR_AF=0.0153;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,20,281,-;NS=2504;SAS_AF=0.0153;SVLEN=261;SVTYPE=ALU;TSD=null	GT	0
X	15441026	DEL_pindel_53184	TGCCTGACTTCAAATTATACTACAGAGCTATAGTAATCAAATCAGCATGGTATTG	T	.	PASS	AC=34;AF=0.00900662;AFR_AF=0.013;AMR_AF=0.0019;AN=3775;CS=DEL_pindel;EAS_AF=0.0026;END=15441080;EUR_AF=0.0013;NS=2504;SAS_AF=0.0237;SVTYPE=DEL	GT	0
X	15522467	DUP_gs.X_CNV_X_15522467_15573276	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=15573276;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	15583582	ALU_umary_ALU_12586	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,264,-;NS=2504;SAS_AF=0;SVLEN=263;SVTYPE=ALU;TSD=null	GT	0
X	15626865	ALU_umary_ALU_12587	G	<INS:ME:ALU>	.	PASS	AC=14;AF=0.00370861;AFR_AF=0.014;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=AAAAGAGACATCTG	GT	0
X	15664365	DUP_gs.X_CNV_X_15664365_15720388	A	<CN0>,<CN2>	.	PASS	AC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=15720388;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=CNV	GT	0
X	15839688	DEL_pindel_53188	TTTTCACTTCATGTTCTTTTGAAATACAAGTTGTAAATTTTGATGAAATCCAAC	T	.	PASS	AC=437;AF=0.115762;AFR_AF=0.0887;AMR_AF=0.105;AN=3775;CS=DEL_pindel;EAS_AF=0.1492;END=15839741;EUR_AF=0.0862;NS=2504;SAS_AF=0.1574;SVTYPE=DEL	GT	0
X	15975940	BI_GS_DEL1_B3_P2913_26	G	<CN0>	100	PASS	AC=151;AF=0.186225;AFR_AF=0.1964;AMR_AF=0.1603;AN=2542;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.1741;END=15977108;EUR_AF=0.1175;NS=2504;SAS_AF=0.2772;SVTYPE=DEL	GT	.
X	16312483	DEL_pindel_53200	AATGTTTTTTAAAATTTTGTGGGTAAATAGTAGGTGTATATATTTATGGGGTACATGAGATACTTTGATACAGGCATGCAGTGAGCAACAATCCCATCATGGAAAACGGGGTATCCATCTCCTCAAGCATTTGTTTTTTGTGTTGCAAACAATCCAATTATACTCTTTTAGTTATTTTTAAATATACAATTAAATTATTATTGACTATAATCATCCTGTTGTGCT	A	.	PASS	AC=1134;AF=0.300397;AFR_AF=0.2981;AMR_AF=0.2824;AN=3775;CS=DEL_pindel;EAS_AF=0.2984;END=16312707;EUR_AF=0.2885;NS=2504;SAS_AF=0.3315;SVTYPE=DEL	GT	1
X	16360393	BI_GS_DEL1_B3_P2914_14	G	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-35,36;CIPOS=-35,36;CS=DEL_union;EAS_AF=0;END=16367091;EUR_AF=0.0052;MC=YL_CN_MSL_3990;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	16364231	DEL_pindel_53201	CTCTGCTTACATTGTCCATCTGCTCTTGCATGCTGTCTACTTTTTCCATTAGGTCCCTTAACAAATTAATCCTAGTAGTTTTGAACTCACAGTCCGATAATTCCAACATCCCTGCCATA	C	.	PASS	AC=1128;AF=0.298808;AFR_AF=0.2981;AMR_AF=0.2824;AN=3775;CS=DEL_pindel;EAS_AF=0.2853;END=16364349;EUR_AF=0.295;NS=2504;SAS_AF=0.3301;SVTYPE=DEL	GT	1
X	16368092	BI_GS_DEL1_B4_P2914_54	T	<CN0>	100	PASS	AC=7;AF=0.00344371;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-24,24;CIPOS=-24,24;CS=DEL_union;EAS_AF=0;END=16370986;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	16412216	UW_VH_9567	A	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,119;CIPOS=-153,0;CS=DEL_union;EAS_AF=0;END=16420740;EUR_AF=0.0052;MC=BI_GS_DEL1_B1_P2914_269;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	16427679	DEL_pindel_53203	TTAAAACAATGATTATCGCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2506;AF=0.663841;AFR_AF=0.678;AMR_AF=0.666;AN=3775;CS=DEL_pindel;EAS_AF=0.6558;END=16428212;EUR_AF=0.671;MEINFO=LINE1,5537,5589,+;NS=2504;SAS_AF=0.6435;SVTYPE=DEL_LINE1	GT	0
X	16472172	BI_GS_DEL1_B3_P2914_24	A	<CN0>	100	PASS	AC=30;AF=0.0116556;AFR_AF=0.0359;AMR_AF=0.0057;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0;END=16479242;EUR_AF=0.0065;MC=YL_CN_CLM_3820,UW_VH_12102;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	16533395	DEL_pindel_53206	TTATAAAGAAAAGAGGTTTAATTGGCTCACAGTTCTGCAGGCTGTACAGGAAGCATAGTAGCTTCCATTCATCTTCTGGGGAAGCCTCAGGAAACTTACAGTTATGGCAGAAGGTGAAAGGGAAGCAAGCATGTCTTACATGGCCAGAGCACAAGGAAGTGTGG	T	.	PASS	AC=7;AF=0.0018543;AFR_AF=0.004;AMR_AF=0.0019;AN=3775;CS=DEL_pindel;EAS_AF=0;END=16533558;EUR_AF=0;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	0
X	16556845	DEL_pindel_53207	TTGAGAGGTAGATTGGGGGTCCTTGAGGACATACAGAAATGTGCCTTTAAGGAGCCTCATCCTAAGAAAAGAGACTCATAAAGAACAATTTGGGCACTAGGATAA	T	.	PASS	AC=1251;AF=0.331391;AFR_AF=0.345;AMR_AF=0.3282;AN=3775;CS=DEL_pindel;EAS_AF=0.3141;END=16556949;EUR_AF=0.3068;NS=2504;SAS_AF=0.3593;SVTYPE=DEL	GT	1
X	16572843	ALU_umary_ALU_12589	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluY,43,266,-;NS=2504;SAS_AF=0.0014;SVLEN=223;SVTYPE=ALU;TSD=null	GT	0
X	16596991	BI_GS_DEL1_B3_P2914_29	T	<CN0>	100	PASS	AC=10;AF=0.00370861;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-35,35;CIPOS=-35,35;CS=DEL_union;EAS_AF=0;END=16602321;EUR_AF=0.0117;MC=YL_CN_ITU_4636;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	16666286	DUP_gs.X_CNV_X_16666286_16692414	C	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=16692414;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	16694683	DEL_pindel_53211	ATAAAGCAAATTGTTCTTACCATGATTTGTCTTTAGTGAAAATGGGAAACTGGAGAGAGAAAAAATTATGTTTCAAGAACTATGGTCTAACTGTTATTATTATGAATTCTAGTCTTATTGGTTGTTTTTGAAGTTTTTTTCTGCAATTTAGACTGACCCTGCTTATTCCTGTGAAACAATCAGTGATCTGTGACTGCAGCTCAGAAAAAAACAAGAGCAGGGCTGGGCGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATAACGAGGTCAAGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCGTCTTTACTAAGAATACAAAAATCAGCCAGGCATGGTAGCGCGTGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGAGACAGAGCAAGACTCTGTCTCGGAAAAAAAAAAAAAAAAAACAAGAGGGATGGGTAACGTAAAAATTGGG	A	.	PASS	AC=500;AF=0.13245;AFR_AF=0.1117;AMR_AF=0.1279;AN=3775;CS=DEL_pindel;EAS_AF=0.1518;END=16695230;EUR_AF=0.1371;NS=2504;SAS_AF=0.1393;SVTYPE=DEL	GT	1
X	16935599	ALU_umary_ALU_12590	A	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	16941924	ALU_umary_ALU_12591	A	<INS:ME:ALU>	.	PASS	AC=9;AF=0.00238411;AFR_AF=0.001;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0039;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0014;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	16955572	BI_GS_DEL1_B2_P2914_469	C	<CN0>	100	PASS	AC=21;AF=0.0535099;AFR_AF=0.0429;AMR_AF=0.0573;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0.0432;END=16956564;EUR_AF=0.064;NS=2504;SAS_AF=0.0655;SVTYPE=DEL	GT	.
X	16976416	ALU_umary_ALU_12592	A	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.001;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa3_1,3,273,-;NS=2504;SAS_AF=0;SVLEN=270;SVTYPE=ALU;TSD=null	GT	0
X	17186016	UW_VH_20722	A	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,172;CIPOS=-186,0;CS=DEL_union;EAS_AF=0.0013;END=17195233;EUR_AF=0.0065;MC=BI_GS_DEL1_B4_P2915_30,YL_CN_CHB_4616;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	17246632	DUP_gs.X_CNV_X_17246632_17497934	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=17497934;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	17349514	ALU_umary_ALU_12593	T	<INS:ME:ALU>	.	PASS	AC=12;AF=0.00317881;AFR_AF=0.012;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CAGTTGTATTTTT	GT	0
X	17502753	DEL_pindel_53216	GGGCTCTGGGGCATCCCAGGGCCAAGTACCAGACAACTAAGGACATCTATGCCTTAGTTGTCTGGTACTT	G	.	PASS	AC=2319;AF=0.614305;AFR_AF=0.5852;AMR_AF=0.6374;AN=3775;CS=DEL_pindel;EAS_AF=0.5772;END=17502822;EUR_AF=0.6527;NS=2504;SAS_AF=0.6365;SVTYPE=DEL	GT	1
X	17520616	DEL_pindel_53217	TAAGAAGTCAGGGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2336;AF=0.618808;AFR_AF=0.6042;AMR_AF=0.6279;AN=3775;CS=DEL_pindel;EAS_AF=0.5641;END=17520931;EUR_AF=0.654;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.6532;SVTYPE=DEL_ALU	GT	1
X	17544375	DEL_pindel_53219	TGGGCTAGGCCAGGCCAGGTGGTTGTAGCTGGGCTAGCGCATGTGTCCACAATCAGTGATAGGTCAGCTG	T	.	PASS	AC=219;AF=0.0580132;AFR_AF=0.0259;AMR_AF=0.042;AN=3775;CS=DEL_pindel;EAS_AF=0.0576;END=17544444;EUR_AF=0.0731;NS=2504;SAS_AF=0.0989;SVTYPE=DEL	GT	0
X	17556037	DEL_pindel_53221	GAGGGGAAAACAAAAGGGAAGCTGTTCCCAGCACATCCACAGGAAGGGAGAATTGCAGAGCCAGCCACGGGCAGGAGGGCTTCCTGCTCAGCCTGGCTGTGGAGGCCTCCAGTGCCCCCATCTTGCGGAAGGCCAAGCATTCCC	G	.	PASS	AC=753;AF=0.19947;AFR_AF=0.2044;AMR_AF=0.1927;AN=3775;CS=DEL_pindel;EAS_AF=0.1937;END=17556180;EUR_AF=0.205;NS=2504;SAS_AF=0.1978;SVTYPE=DEL	GT	0
X	17637426	BI_GS_DEL1_B2_P2915_356	A	<CN0>	100	PASS	AC=91;AF=0.139338;AFR_AF=0.1386;AMR_AF=0.1469;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1165;END=17638164;EUR_AF=0.1514;MC=UW_VH_8092;NS=2504;SAS_AF=0.1462;SVTYPE=DEL	GT	.
X	18118310	BI_GS_DEL1_B4_P2916_22	A	<CN0>	100	PASS	AC=7;AF=0.00635762;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-40,40;CIPOS=-40,40;CS=DEL_union;EAS_AF=0.0052;END=18120917;EUR_AF=0.0104;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	.
X	18168241	YL_CN_CHB_4619	C	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=18180552;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	18278753	BI_GS_DEL1_B2_P2916_158	A	<CN0>	100	PASS	AC=118;AF=0.0643709;AFR_AF=0.1705;AMR_AF=0.0439;AN=2542;CIEND=-64,64;CIPOS=-64,64;CS=DEL_union;EAS_AF=0.0131;END=18280881;EUR_AF=0.0339;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	.
X	18352754	L1_umary_LINE1_3015	G	<INS:ME:LINE1>	.	PASS	AC=29;AF=0.00768212;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0327;EUR_AF=0.0026;MEINFO=LINE1,1,5985,-;NS=2504;SAS_AF=0.0028;SVLEN=5984;SVTYPE=LINE1;TSD=AGCCTTGTGTATTTTG	GT	0
X	18353048	DEL_pindel_53225	TAGGCTGGGTGCAGTGGCTCATGCCTGTAATCCTAGCACTTTGGGAGGCCAAGGCGGGTGGATTTCTTGAGCCCAGCAGTTCAAGATCAGCCTGGGACACTCAGCATCAGAGACACTGATCAATTAAAGACTATAGCCCAGTGGCTAAAGAAACAGACAAGAAAGTAAAATATATACGGGGTGTTGAATCCACACAGATGATAAAGCACTGTAATCCAGGTAGTAAGTGAAGGTACTTACCGACTCTCATCAAAGAGCAAAAACCTGTGAATTACATTAAAATGAGTCTTATC	T	.	PASS	AC=1055;AF=0.27947;AFR_AF=0.2732;AMR_AF=0.2691;AN=3775;CS=DEL_pindel;EAS_AF=0.2736;END=18353340;EUR_AF=0.2728;NS=2504;SAS_AF=0.3092;SVTYPE=DEL	GT	1
X	18397745	DEL_pindel_53226	AGCTGGGATTACAGGTGGCTGCCACCACGCCAGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCAGCCTCACGAAGT	A	.	PASS	AC=762;AF=0.201854;AFR_AF=0.2024;AMR_AF=0.1889;AN=3775;CS=DEL_pindel;EAS_AF=0.2225;END=18397880;EUR_AF=0.201;NS=2504;SAS_AF=0.1894;SVTYPE=DEL	GT	1
X	18399871	BI_GS_DEL1_B1_P2916_246	T	<CN0>	100	PASS	AC=6;AF=0.00953642;AFR_AF=0.009;AMR_AF=0.0095;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0.0105;END=18401829;EUR_AF=0.0157;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	18436800	DEL_pindel_53227	ATGTATACACATATATATGTGTGTATATATATATACACACACATATATATGTATATACATATATATGTGTGTATACATATATATATGTGTACACATATATATGTGTGTATACACATATATATGTGTACACATATATATGTGTGTATACACATATATATG	A	.	PASS	AC=1039;AF=0.275232;AFR_AF=0.2772;AMR_AF=0.2615;AN=3775;CS=DEL_pindel;EAS_AF=0.2775;END=18436958;EUR_AF=0.2546;NS=2504;SAS_AF=0.3022;SVTYPE=DEL	GT	0
X	18436888	DEL_pindel_53228	GTACACATATATATGTGTGTATACACATATATATGTGTACACATATATATGTGTGTATACACATATATATGTGTA	G	.	PASS	AC=907;AF=0.240265;AFR_AF=0.2473;AMR_AF=0.2118;AN=3775;CS=DEL_pindel;EAS_AF=0.2317;END=18436962;EUR_AF=0.2324;NS=2504;SAS_AF=0.2688;SVTYPE=DEL	GT	1
X	18468816	BI_GS_DEL1_B4_P2916_61	T	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-45,46;CIPOS=-45,46;CS=DEL_union;EAS_AF=0.0013;END=18474273;EUR_AF=0.0052;MC=YL_CN_BEB_3666;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	18847561	ALU_umary_ALU_12594	T	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,2,280,-;NS=2504;SAS_AF=0.0028;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	18888689	DUP_gs.X_CNV_X_18888689_18957355	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=18957355;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	18952948	ALU_umary_ALU_12595	A	<INS:ME:ALU>	.	PASS	AC=21;AF=0.00556291;AFR_AF=0.001;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0209;MEINFO=AluYe5,1,280,+;NS=2504;SAS_AF=0.0028;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	19042771	DUP_gs.X_CNV_X_19042771_19122398	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=19122398;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	19073290	DEL_pindel_53238	GAGCTTTATAGAGACTGCTTAACCAGCTCCCACAGTTGTATTAGGACAAATCCCTGTAGCAAATCCCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGCGCGCGCACGCGCGTGCACGCACCTTAGTGGTTCTCCTGTGATTGAATCCTGACTTACACAGTTTGAGATAGAAACCTTCTGAAGCAATTAGATTAAATGGTCTATAACTGTGCTGTCCAACATGGTAGCCATTAGCTACATGTGGCTATTTAAATTTAAATTAATTAAAGTTAAACATAATTAGAATTTAGTACCCCAGTCAAGTTTCAAGTGCTCAATACTGTGGTCACATGTGGCTGGTGGCCACTGTTTTGGGCAGCACAGATATAGAGCACTTCCGTTATTGCAAAAAAATGTTCTATGAGCACTGGTCTATAGTGATAATTACTAGTATTTACTGAGTTCTCACCATGTGTCAGATGCAGATTCCAAGTTTGCTCTGGAGAGCACGATGCGGCAGGCAAACGGGGAAAGAGAGAGAGTGATGGGAATCAGGTGGGAGATTTTTTTTTTTTTTTTTGAGATGGAGTCTCTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACAATATCGGATCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGTCTCCCAAGT	G	.	PASS	AC=80;AF=0.021192;AFR_AF=0.0299;AMR_AF=0.021;AN=3775;CS=DEL_pindel;EAS_AF=0.0079;END=19073980;EUR_AF=0.0313;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	1
X	19127122	BI_GS_DEL1_B1_P2917_81	G	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0;END=19135848;EUR_AF=0.0052;MC=YL_CN_GBR_4488,UW_VH_4231;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	19283463	DUP_gs.X_CNV_X_19283463_19381414	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=19381414;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	19357192	ALU_umary_ALU_12596	T	<INS:ME:ALU>	.	PASS	AC=44;AF=0.0116556;AFR_AF=0.0419;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYb11,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=AAAGAACTATTCCT	GT	0
X	19374800	DEL_pindel_53242	GAATGTAGTTGTAGAATGTGTGACTTTCCCAAACAGATAACCTTCACAATTCTGAGTTAGGTGTTATTGTTTTGCCCATTTTGCAGACAAGGAAACTGAGCCATAGAGCAGTTAAAGGTACACAGCTACTCTGTCTT	G	.	PASS	AC=1628;AF=0.431258;AFR_AF=0.7009;AMR_AF=0.3569;AN=3775;CS=DEL_pindel;EAS_AF=0.3168;END=19374936;EUR_AF=0.312;NS=2504;SAS_AF=0.3579;SVTYPE=DEL	GT	1
X	19411868	DEL_pindel_53244	CTGCCTGGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGACGGAGTCTCACTGTGTAACCTAGAATGGAGTGGAGTGGTA	C	.	PASS	AC=1066;AF=0.282384;AFR_AF=0.2941;AMR_AF=0.2653;AN=3775;CS=DEL_pindel;EAS_AF=0.2618;END=19411952;EUR_AF=0.2663;NS=2504;SAS_AF=0.3175;SVTYPE=DEL	GT	1
X	19435029	DUP_gs.X_CNV_X_19435029_19488491	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=19488491;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	19466074	DUP_gs.X_CNV_X_19466074_19469129	T	<CN0>,<CN2>	.	PASS	AC=134,3;AF=0.0354967,0.0007947;AFR_AF=0.003,0.001;AMR_AF=0.0286,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=19469129;EUR_AF=0.0679,0;MC=YL_CN_GBR_4489,BI_GS_DEL1_B1_P2917_289;NS=2504;SAS_AF=0.0891,0.0014;SVTYPE=CNV	GT	0
X	19470192	DEL_pindel_53247	AGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	A	.	PASS	AC=963;AF=0.255099;AFR_AF=0.2114;AMR_AF=0.2538;AN=3775;CS=DEL_pindel;EAS_AF=0.2631;END=19470468;EUR_AF=0.2507;NS=2504;SAS_AF=0.3134;SVTYPE=DEL	GT	0
X	19540241	DUP_gs.X_CNV_X_19540241_19635153	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=19635153;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	19635311	DEL_pindel_53255	ATGTAAAACTCACTTTTATGCTTCCCTTGTCTCCAGGATCACATTCTTGTGATATGTATTGTCCAATGCCTAAAAACAGCCACTTTGTATGTTTTGGCCAATGTTAGAGTTGTCTATGACAGGAAGGCAAGTCTAATTACCCTTTACTCTATAATAGCCGCAACCCCAAGTTATATATTCCCTCAAAAAGATTGTTTCTTCATTTAGACTGGACTTTTTCATTCTAGATATAATAGAACTTTCAGCTCTATCTTTAAAAGTCTGAGCTATTTCAAGGTCTAATTCCCAAAAGAAGTCCTAGAGAAAGAATG	A	.	PASS	AC=588;AF=0.155762;AFR_AF=0.1376;AMR_AF=0.1546;AN=3775;CS=DEL_pindel;EAS_AF=0.1649;END=19635621;EUR_AF=0.154;NS=2504;SAS_AF=0.1741;SVTYPE=DEL	GT	0
X	19829295	BI_GS_DEL1_B3_P2917_32	A	<CN0>	100	PASS	AC=19;AF=0.0127152;AFR_AF=0.0239;AMR_AF=0.0115;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0039;END=19831199;EUR_AF=0.017;MC=UW_VH_12500;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	19946495	BI_GS_DEL1_B3_P2917_34	G	<CN0>	100	PASS	AC=8;AF=0.0198676;AFR_AF=0.011;AMR_AF=0.021;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0.017;END=19948330;EUR_AF=0.0235;NS=2504;SAS_AF=0.0306;SVTYPE=DEL	GT	.
X	20138974	DUP_gs.X_CNV_X_20138974_20152179	G	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=20152179;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	20174402	ALU_umary_ALU_12597	T	<INS:ME:ALU>	.	PASS	AC=5;AF=0.0013245;AFR_AF=0.005;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,270,-;NS=2504;SAS_AF=0;SVLEN=269;SVTYPE=ALU;TSD=null	GT	0
X	20238579	DEL_pindel_53265	CGCCTAACACAGAATGGCAGTCTGAACATGAGGTGGCTCTTGAGACTATGTCAGGAAAAAGCATCATCTTTACTGCACAACTCATGAA	C	.	PASS	AC=1257;AF=0.33298;AFR_AF=0.348;AMR_AF=0.3244;AN=3775;CS=DEL_pindel;EAS_AF=0.3141;END=20238666;EUR_AF=0.3094;NS=2504;SAS_AF=0.3635;SVTYPE=DEL	GT	1
X	20263983	UW_VH_15508	A	<CN0>	100	PASS	AC=33;AF=0.0606623;AFR_AF=0.0608;AMR_AF=0.0439;AN=2542;CIEND=0,104;CIPOS=-62,0;CS=DEL_union;EAS_AF=0.0602;END=20265790;EUR_AF=0.0457;MC=BI_GS_DEL1_B3_P2918_7;NS=2504;SAS_AF=0.0891;SVTYPE=DEL	GT	.
X	20482662	BI_GS_DEL1_B3_P2918_17	T	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.005;AMR_AF=0.0038;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0;END=20486786;EUR_AF=0.0026;MC=YL_CN_MSL_3994;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	20597650	YL_CN_CDX_3801	G	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=20666052;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	20754401	ALU_umary_ALU_12598	A	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,8,281,-;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=null	GT	0
X	20815391	DEL_pindel_53273	CCCCCTTTAAGAGAAATCTCAACCAATCGTTTTCTCTTTGCAGCTTCACTTCAGCTCTTCAAAAGCATTTTCTTTCTTAAAACAGTAGTGGTCATGGGAAACTATG	C	.	PASS	AC=81;AF=0.0214569;AFR_AF=0.0558;AMR_AF=0.0095;AN=3775;CS=DEL_pindel;EAS_AF=0.0026;END=20815496;EUR_AF=0.017;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	0
X	20860022	DEL_pindel_53274	ACACTCTTAATCTTCAAGCTGCTATTCCTTTTGAGGAAACAGGAATTTGATGACTCAATGCCCAAGTAGATATTTAAACAATGAAATTGAGAAACTTATTATTTCTTTTACCTTTGTTATCTGTT	A	.	PASS	AC=1195;AF=0.316556;AFR_AF=0.3091;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.3076;END=20860146;EUR_AF=0.3003;NS=2504;SAS_AF=0.3593;SVTYPE=DEL	GT	1
X	20886928	BI_GS_DEL1_B1_P2918_597	C	<CN0>	100	PASS	AC=326;AF=0.306755;AFR_AF=0.3031;AMR_AF=0.2939;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.2552;END=20887286;EUR_AF=0.3538;NS=2504;SAS_AF=0.3259;SVTYPE=DEL	GT	.
X	20923183	ALU_umary_ALU_12599	G	<INS:ME:ALU>	.	PASS	AC=32;AF=0.00847682;AFR_AF=0.0319;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,262,+;NS=2504;SAS_AF=0;SVLEN=261;SVTYPE=ALU;TSD=AACTCCTAGGCTG	GT	0
X	21015832	ALU_umary_ALU_12600	A	<INS:ME:ALU>	.	PASS	AC=11;AF=0.00291391;AFR_AF=0.007;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,1,278,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=AAAAAA	GT	0
X	21016021	DEL_pindel_53276	TATGATAAATTTTAGCCCTAAAATAAAATGACTGGTTATTTAAGAAGGAGGGATGTTC	T	.	PASS	AC=727;AF=0.192583;AFR_AF=0.1825;AMR_AF=0.1832;AN=3775;CS=DEL_pindel;EAS_AF=0.2134;END=21016078;EUR_AF=0.1658;NS=2504;SAS_AF=0.2201;SVTYPE=DEL	GT	1
X	21254191	DEL_pindel_53279	CATATATGTGTGTATGTATATATATATATATATATATATATATATATATATAT	C	.	PASS	AC=1203;AF=0.318675;AFR_AF=0.2871;AMR_AF=0.3225;AN=3775;CS=DEL_pindel;EAS_AF=0.3128;END=21254243;EUR_AF=0.3029;NS=2504;SAS_AF=0.383;SVTYPE=DEL	GT	1
X	21286749	BI_GS_DEL1_B3_P2919_7	T	<CN0>	100	PASS	AC=9;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0;END=21298165;EUR_AF=0.0065;MC=YL_CN_ITU_4639;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	21300882	YL_CN_JPT_4678	A	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=21347108;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	21322861	DEL_pindel_53282	GTGTGTGTATATATATACACATATGTGTATATATGTGTGTGTATATATATACACATA	G	.	PASS	AC=1016;AF=0.269139;AFR_AF=0.2672;AMR_AF=0.2366;AN=3775;CS=DEL_pindel;EAS_AF=0.2696;END=21322917;EUR_AF=0.2533;NS=2504;SAS_AF=0.312;SVTYPE=DEL	GT	1
X	21357610	UW_VH_9558	A	<CN0>	100	PASS	AC=54;AF=0.0384106;AFR_AF=0.0758;AMR_AF=0.0382;AN=2542;CIEND=0,320;CIPOS=-308,0;CS=DEL_union;EAS_AF=0.0262;END=21361255;EUR_AF=0.0274;MC=BI_GS_DEL1_B5_P2919_267,YL_CN_YRI_5519;NS=2504;SAS_AF=0.0111;SVTYPE=DEL	GT	.
X	21453093	L1_umary_LINE1_3018	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5582,5779,-;NS=2504;SAS_AF=0.0014;SVLEN=197;SVTYPE=LINE1;TSD=null	GT	0
X	21485800	ALU_umary_ALU_12601	G	<INS:ME:ALU>	.	PASS	AC=26;AF=0.00688742;AFR_AF=0.0249;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,8,281,-;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=null	GT	0
X	21800758	DEL_pindel_53290	GGGCCCTAATCCAATACAACTGGTGTCCTTATGAAAAGGGAAAATCCTGACACAGATATGCACACAGGGAGAAGAATACAATGTGAACACCAAGGCAGGTATCAGGGTAATGAACCTGCAAGTCACGAAGGCCAAATATTGCCAGCAAACCACTAGAAAGTTA	G	.	PASS	AC=1208;AF=0.32;AFR_AF=0.2951;AMR_AF=0.3111;AN=3775;CS=DEL_pindel;EAS_AF=0.3102;END=21800920;EUR_AF=0.3316;NS=2504;SAS_AF=0.3593;SVTYPE=DEL	GT	1
X	21865704	ALU_umary_ALU_12602	T	<INS:ME:ALU>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,276,-;NS=2504;SAS_AF=0;SVLEN=274;SVTYPE=ALU;TSD=TGGTATT	GT	0
X	21884420	ALU_umary_ALU_12603	G	<INS:ME:ALU>	.	PASS	AC=17;AF=0.00450331;AFR_AF=0;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0183;MEINFO=AluYb9,15,276,+;NS=2504;SAS_AF=0;SVLEN=261;SVTYPE=ALU;TSD=GAAAAGTGTTCTAG	GT	0
X	22035562	DUP_gs.X_CNV_X_22035562_22040699	G	<CN0>,<CN2>	.	PASS	AC=0,12;AF=0,0.00317881;AFR_AF=0,0.012;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=22040699;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	22037606	DEL_pindel_53294	AGGGGATGTGCCTGTGTCCCTTTCTAAAACACAGTTTTTATCTCTGAGACTACTAATGTTCTGTTTAAACTTGCTCAGAGCTCACATCCAGGGCCCAT	A	.	PASS	AC=765;AF=0.202649;AFR_AF=0.1805;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2277;END=22037703;EUR_AF=0.1854;NS=2504;SAS_AF=0.2131;SVTYPE=DEL	GT	1
X	22339982	DEL_pindel_53297	TTATTAAGAGGGCTAGCTGAAAAACATCATAGTATTTTGTTTGATTTAAACTACTGGTCTCA	T	.	PASS	AC=87;AF=0.0230464;AFR_AF=0.016;AMR_AF=0.0191;AN=3775;CS=DEL_pindel;EAS_AF=0.0275;END=22340043;EUR_AF=0.017;NS=2504;SAS_AF=0.0376;SVTYPE=DEL	GT	0
X	22365083	ALU_umary_ALU_12604	T	<INS:ME:ALU>	.	PASS	AC=211;AF=0.055894;AFR_AF=0.0169;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0.0877;EUR_AF=0.03;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.1393;SVLEN=280;SVTYPE=ALU;TSD=GCTTCCTTTCTTTTT	GT	1
X	22369769	L1_umary_LINE1_3019	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,70,5787,+;NS=2504;SAS_AF=0;SVLEN=5717;SVTYPE=LINE1;TSD=AAATACTTTTTTTTT	GT	0
X	22377636	BI_GS_DEL1_B4_P2920_49	T	<CN0>	100	PASS	AC=280;AF=0.29351;AFR_AF=0.2841;AMR_AF=0.2576;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0.3338;END=22378087;EUR_AF=0.282;NS=2504;SAS_AF=0.3022;SVTYPE=DEL	GT	.
X	22388080	UW_VH_17280	G	<CN0>	100	PASS	AC=8;AF=0.0161589;AFR_AF=0.015;AMR_AF=0.0248;AN=2542;CIEND=0,257;CIPOS=-270,0;CS=DEL_union;EAS_AF=0.0223;END=22390197;EUR_AF=0.0144;MC=BI_GS_DEL1_B3_P2920_9;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	22492009	DUP_gs.X_CNV_X_22492009_22497620	T	<CN0>,<CN2>	.	PASS	AC=7,1;AF=0.0018543,0.0002649;AFR_AF=0.007,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=22497620;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	22492030	BI_GS_DEL1_B5_P2920_447	A	<CN0>	100	PASS	AC=13;AF=0.00344371;AFR_AF=0.009;AMR_AF=0.0019;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=22497716;EUR_AF=0.0039;MC=UW_VH_22425,YL_CN_YRI_5521;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	22504994	ALU_umary_ALU_12605	T	<INS:ME:ALU>	.	PASS	AC=36;AF=0.00953642;AFR_AF=0.0319;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,2,277,-;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=null	GT	0
X	22624887	BI_GS_DEL1_B5_P2920_563	A	<CN0>	100	PASS	AC=11;AF=0.00344371;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=22630718;EUR_AF=0.0065;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	22698248	YL_CN_STU_4559	C	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=22921088;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	22735316	DUP_gs.X_CNV_X_22735316_22747548	T	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=22747548;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0.0014;SVTYPE=CNV	GT	0
X	22768204	L1_umary_LINE1_3020	G	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2346,6005,+;NS=2504;SAS_AF=0.0014;SVLEN=3659;SVTYPE=LINE1;TSD=AGAAAGACAGGGCAGGGG	GT	0
X	22855548	DEL_pindel_53300	TGGGATATACTGATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG	T	.	PASS	AC=1276;AF=0.338013;AFR_AF=0.3829;AMR_AF=0.3282;AN=3775;CS=DEL_pindel;EAS_AF=0.3076;END=22855837;EUR_AF=0.3042;MEINFO=AluY,22,281,-;NS=2504;SAS_AF=0.351;SVTYPE=DEL_ALU	GT	1
X	22941250	BI_GS_DEL1_B4_P2920_142	G	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-16,17;CIPOS=-16,17;CS=DEL_union;EAS_AF=0;END=22955053;EUR_AF=0.0065;MC=YL_CN_BEB_3668;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	22947646	YL_CN_JPT_4679	A	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=22997060;EUR_AF=0.0065;MC=UW_VH_21642,BI_GS_DEL1_B4_P2920_145;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	22960251	ALU_umary_ALU_12606	T	<INS:ME:ALU>	.	PASS	AC=6;AF=0.0015894;AFR_AF=0.005;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,4,278,+;NS=2504;SAS_AF=0;SVLEN=274;SVTYPE=ALU;TSD=null	GT	0
X	23030827	YL_CN_PJL_5007	G	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=23068702;EUR_AF=0.0078;MC=BI_GS_DEL1_B3_P2921_3;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	23076960	UW_VH_20895	T	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,140;CIPOS=-157,0;CS=DEL_union;EAS_AF=0.0013;END=23082999;EUR_AF=0.0078;MC=YL_CN_CHB_4620,BI_GS_DEL1_B4_P2921_13;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	23179256	L1_umary_LINE1_3021	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1477,5940,-;NS=2504;SAS_AF=0.0014;SVLEN=4463;SVTYPE=LINE1;TSD=null	GT	0
X	23202759	BI_GS_DEL1_B2_P2921_101	A	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0013;END=23227700;EUR_AF=0.0052;MC=UW_VH_11601,YL_CN_CDX_3802;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	23384572	UW_VH_12334	T	<CN0>	100	PASS	AC=12;AF=0.0113907;AFR_AF=0.015;AMR_AF=0.0115;AN=2542;CIEND=0,153;CIPOS=-226,0;CS=DEL_union;EAS_AF=0.0079;END=23386277;EUR_AF=0.0091;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	.
X	23475469	DUP_gs.X_CNV_X_23475469_23490638	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=23490638;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	23600453	L1_umary_LINE1_3022	C	<INS:ME:LINE1>	.	PASS	AC=28;AF=0.00741722;AFR_AF=0.0259;AMR_AF=0.0038;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4584,5972,+;NS=2504;SAS_AF=0;SVLEN=1388;SVTYPE=LINE1;TSD=GAAAAAGGCAACAGAC	GT	0
X	23672647	UW_VH_17232	A	<CN0>	100	PASS	AC=9;AF=0.00344371;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=0,93;CIPOS=-114,0;CS=DEL_union;EAS_AF=0.0026;END=23675179;EUR_AF=0.0039;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	23798222	DEL_pindel_53309	ATATATACGTATATATACACACATATATATGTGTATATATATGTATATATATATACC	A	.	PASS	AC=975;AF=0.258278;AFR_AF=0.2682;AMR_AF=0.2405;AN=3775;CS=DEL_pindel;EAS_AF=0.212;END=23798278;EUR_AF=0.2781;NS=2504;SAS_AF=0.2855;SVTYPE=DEL	GT	1
X	23812115	BI_GS_DEL1_B5_P2921_665	C	<CN0>	100	PASS	AC=39;AF=0.0815894;AFR_AF=0.0668;AMR_AF=0.1126;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0.0746;END=23813045;EUR_AF=0.0796;NS=2504;SAS_AF=0.0891;SVTYPE=DEL	GT	.
X	23839396	YL_CN_ITU_4640	A	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=23846879;EUR_AF=0.0039;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	23849563	DUP_gs.X_CNV_X_23849563_23864095	C	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=23864095;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	23899994	DUP_gs.X_CNV_X_23899994_23906285	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=23906285;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	24015943	BI_GS_DEL1_B2_P2922_6	C	<CN0>	100	PASS	AC=15;AF=0.0108609;AFR_AF=0.012;AMR_AF=0.0019;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.0236;END=24022659;EUR_AF=0.0052;MC=UW_VH_11481,YL_CN_CDX_3803;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	.
X	24087236	DEL_pindel_53315	TGCCTGTGATCCCAGCAATTTGGGAGGCTGAGGTGGGTGGATCGCTTGAGCTCAGGAGTTTGAGACCA	T	.	PASS	AC=873;AF=0.231258;AFR_AF=0.1934;AMR_AF=0.2538;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=24087303;EUR_AF=0.2232;NS=2504;SAS_AF=0.2549;SVTYPE=DEL	GT	1
X	24103576	SVA_umary_SVA_834	T	<INS:ME:SVA>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0.004;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,32,1620,+;NS=2504;SAS_AF=0;SVLEN=1588;SVTYPE=SVA;TSD=null	GT	0
X	24110987	YL_CN_PUR_5625	C	<CN0>	100	PASS	AC=37;AF=0.0129801;AFR_AF=0.004;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=24116767;EUR_AF=0.0522;MC=UW_VH_2146,BI_GS_DEL1_B2_P2922_36;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	24184274	UW_VH_22501	A	<CN0>	100	PASS	AC=89;AF=0.13298;AFR_AF=0.1196;AMR_AF=0.1164;AN=2542;CIEND=0,24;CIPOS=-29,0;CS=DEL_union;EAS_AF=0.1204;END=24185041;EUR_AF=0.1345;MC=BI_GS_DEL1_B5_P2922_103;NS=2504;SAS_AF=0.1755;SVTYPE=DEL	GT	.
X	24254806	UW_VH_5951	C	<CN0>	100	PASS	AC=12;AF=0.0174834;AFR_AF=0.015;AMR_AF=0.0191;AN=2542;CIEND=0,129;CIPOS=-123,0;CS=DEL_union;EAS_AF=0.0262;END=24256768;EUR_AF=0.0183;MC=BI_GS_DEL1_B1_P2922_118;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	24259047	YL_CN_GIH_3399	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=24276594;EUR_AF=0.0052;MC=BI_GS_DEL1_B5_P2922_155;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	24292700	DEL_pindel_53321	TAAGATGTAAAATTCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAAAAAA	T	.	PASS	AC=2295;AF=0.607947;AFR_AF=0.6241;AMR_AF=0.6431;AN=3775;CS=DEL_pindel;EAS_AF=0.5995;END=24293032;EUR_AF=0.6345;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5404;SVTYPE=DEL_ALU	GT	1
X	24302880	BI_GS_DEL1_B5_P2922_200	C	<CN0>	100	PASS	AC=26;AF=0.0603973;AFR_AF=0.0518;AMR_AF=0.0802;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0.0432;END=24304158;EUR_AF=0.0705;NS=2504;SAS_AF=0.0655;SVTYPE=DEL	GT	.
X	24539415	UW_VH_25339	A	<CN0>	100	PASS	AC=10;AF=0.0262252;AFR_AF=0.0279;AMR_AF=0.0248;AN=2542;CIEND=0,241;CIPOS=-275,0;CS=DEL_union;EAS_AF=0.0249;END=24540978;EUR_AF=0.0261;NS=2504;SAS_AF=0.0265;SVTYPE=DEL	GT	.
X	24736870	BI_GS_DEL1_B4_P2922_81	A	<CN0>	100	PASS	AC=15;AF=0.0439735;AFR_AF=0.0369;AMR_AF=0.0592;AN=2542;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0.0432;END=24738017;EUR_AF=0.0522;NS=2504;SAS_AF=0.0348;SVTYPE=DEL	GT	.
X	24756029	DEL_pindel_53332	TAAAAGCCTCTGGTAGTTTTGGCCGGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGGGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1367;AF=0.362119;AFR_AF=0.4576;AMR_AF=0.3435;AN=3775;CS=DEL_pindel;EAS_AF=0.2932;END=24756359;EUR_AF=0.3159;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3649;SVTYPE=DEL_ALU	GT	1
X	24842821	ALU_umary_ALU_12607	A	<INS:ME:ALU>	.	PASS	AC=15;AF=0.00397351;AFR_AF=0.003;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0091;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0.0014;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	24877203	UW_VH_5249	T	<CN0>	100	PASS	AC=17;AF=0.034702;AFR_AF=0.0299;AMR_AF=0.0573;AN=2542;CIEND=0,167;CIPOS=-233,0;CS=DEL_union;EAS_AF=0.0236;END=24878541;EUR_AF=0.0352;MC=BI_GS_DEL1_B1_P2922_548;NS=2504;SAS_AF=0.0362;SVTYPE=DEL	GT	.
X	25159302	ALU_umary_ALU_12608	T	<INS:ME:ALU>	.	PASS	AC=75;AF=0.0198676;AFR_AF=0.0688;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	25317339	DEL_pindel_53335	TGATATAATGGGGGAACAAGACGGGCATGGGGCCTACCCTCTTAAATCTAAACTCTATGATGTATACAGTCAAGATAGCAATTAGAATATAGTGTGAAAGGCGAGTACAAGGATAAGGTGCTATGGCCACGTGTGAGGGGGCACTTAACTCAGAAGTAGAATGAAGGATGGACTGAGGGAGCAAACAAAGGGTCACATATTGCATGATTCCAAGTATATGAAATATCCTGTATAGGTAATTTCATAGAGACAGAAAGATTAGTTGGTTGTCGGGATCTGGGGATAATGAGGAGTAACTGCTTAATGAGCACAGGGTTTCTTTAGAAGTGATGAAAATGTTCTGGAACTAGATAATTGTGATACTTGCAGAGCATTGTGAGTGTACTAAAAGCCACTGAATTGTATACTTTAAAATGGATAATTTTATGTCATGTAAATTTTACCTCAATAGAAAAAATAAAATAGAAGAGTGAGCAGTTAGAAGACTACTACCATGATAGTCCTGATGTGAGATACATTTTAAAAGTATTTATTTTAAAAGTATTATATTTATGTAGTTTTTGAATAGGCATGCACATGGCACAAGCTTCAAAAAGAACAAAAGGTTTAAAGTAAAATGTAAGTGTCCTTCCCTTCCTATCTGCCAGTCATCTAGTTCTCTTCCCTTGGAGGAAAACATAGTTATCAGATTCTTATGTATTTTGAGTCTATGCATAATGTTTATGTATTTGTGTGTTTATATATAAATATAAATATATCTCTTGTGTATATATTCATATATGTGTGTATTCAAATATATATTATTTTAAAATCAACTTGTAGTTTATGGGGTTTAGGATATGCCACCTCATAATATGGCACCCTGGCATTTGAGAAAACAGCA	T	.	PASS	AC=373;AF=0.098808;AFR_AF=0.0688;AMR_AF=0.1145;AN=3775;CS=DEL_pindel;EAS_AF=0.123;END=25318221;EUR_AF=0.0979;NS=2504;SAS_AF=0.1045;SVTYPE=DEL	GT	0
X	25333375	YL_CN_STU_4561	G	<CN0>	100	PASS	AC=23;AF=0.047947;AFR_AF=0.0439;AMR_AF=0.0477;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0445;END=25336819;EUR_AF=0.0601;NS=2504;SAS_AF=0.0446;SVTYPE=DEL	GT	.
X	25380271	BI_GS_DEL1_B5_P2923_306	A	<CN0>	100	PASS	AC=11;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=25393090;EUR_AF=0.0065;MC=YL_CN_GIH_3400;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	25614920	UW_VH_5408	G	<CN0>	100	PASS	AC=11;AF=0.0172185;AFR_AF=0.016;AMR_AF=0.0153;AN=2542;CIEND=0,247;CIPOS=-228,0;CS=DEL_union;EAS_AF=0.0144;END=25616937;EUR_AF=0.0274;MC=BI_GS_DEL1_B1_P2923_407;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	.
X	25621786	BI_GS_DEL1_B2_P2923_304	T	<CN0>	100	PASS	AC=16;AF=0.042649;AFR_AF=0.0389;AMR_AF=0.042;AN=2542;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0.0432;END=25623133;EUR_AF=0.0444;NS=2504;SAS_AF=0.046;SVTYPE=DEL	GT	.
X	25658706	DEL_pindel_53336	AATGGGGATGGGATTCAAACAAGCTATTTATATTTGCCCTCCTAATTGTTCAAAAACAATTTCAAATAAACAAAGGGGACATGTTTAAAATCTGGAAATAAAATTCTAAGTGTTTAAAAAAACAAGTTGAAAGCAGGAATAAAGGAAGAATGCAGACTACTAAGGATATGAATTCATTCTCAACAATGATAGAAAAGGTTAAAATACCTGTTCCTTCTAATCTCATTCTTTCTCTTACTCCCTGCCCTCATGCAACCGTGGCCT	A	.	PASS	AC=568;AF=0.150464;AFR_AF=0.1157;AMR_AF=0.1183;AN=3775;CS=DEL_pindel;EAS_AF=0.1924;END=25658969;EUR_AF=0.1514;NS=2504;SAS_AF=0.1769;SVTYPE=DEL	GT	1
X	25743848	DEL_pindel_53338	TAGTTACTTCACCTGTATCTGAATTAAGGGGCACCCCAAACCCAGTAATGCTGTAATTCTTGA	T	.	PASS	AC=237;AF=0.0627815;AFR_AF=0.0289;AMR_AF=0.0744;AN=3775;CS=DEL_pindel;EAS_AF=0.0746;END=25743910;EUR_AF=0.0875;NS=2504;SAS_AF=0.0627;SVTYPE=DEL	GT	1
X	25781546	BI_GS_DEL1_B2_P2923_384	C	<CN0>	100	PASS	AC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-30,30;CIPOS=-30,30;CS=DEL_union;EAS_AF=0;END=25785920;EUR_AF=0.0039;MC=YL_CN_PEL_4318;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	25845880	DEL_pindel_53341	TCTTTAAAAGATAGCCACCTAAAGTCAAAAGTTAAATGGCAACTGTCATATGACATTGTACAGTTTTGTTGAAATTATTTAGGCAAA	T	.	PASS	AC=645;AF=0.170861;AFR_AF=0.1176;AMR_AF=0.1794;AN=3775;CS=DEL_pindel;EAS_AF=0.2173;END=25845966;EUR_AF=0.1723;NS=2504;SAS_AF=0.188;SVTYPE=DEL	GT	1
X	25889622	L1_umary_LINE1_3023	A	<INS:ME:LINE1>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4026,5956,+;NS=2504;SAS_AF=0;SVLEN=1930;SVTYPE=LINE1;TSD=null	GT	0
X	25903910	ALU_umary_ALU_12609	T	<INS:ME:ALU>	.	PASS	AC=278;AF=0.0736424;AFR_AF=0.1565;AMR_AF=0.0802;AN=3775;CS=ALU_umary;EAS_AF=0.0537;EUR_AF=0.0379;MEINFO=AluUndef,78,281,+;NS=2504;SAS_AF=0.0125;SVLEN=203;SVTYPE=ALU;TSD=null	GT	1
X	25947939	DEL_pindel_53345	TTCAAGTCATATTCTATTTTATTTTATTTTATTTTATTTTATTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTTCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1503;AF=0.398146;AFR_AF=0.4427;AMR_AF=0.3855;AN=3775;CS=DEL_pindel;EAS_AF=0.3901;END=25948273;EUR_AF=0.3668;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3872;SVTYPE=DEL_ALU	GT	1
X	25978463	ALU_umary_ALU_12610	G	<INS:ME:ALU>	.	PASS	AC=164;AF=0.0434437;AFR_AF=0.1266;AMR_AF=0.0229;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0313;MEINFO=AluYb8,2,280,+;NS=2504;SAS_AF=0.0014;SVLEN=278;SVTYPE=ALU;TSD=AAATTTATTCCTAGG	GT	0
X	26001405	BI_GS_DEL1_B4_P2924_1	A	<CN0>	100	PASS	AC=5;AF=0.00980132;AFR_AF=0.005;AMR_AF=0.0115;AN=2542;CIEND=-18,19;CIPOS=-18,19;CS=DEL_union;EAS_AF=0.0065;END=26003820;EUR_AF=0.0248;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	26167454	ALU_umary_ALU_12611	C	<INS:ME:ALU>	.	PASS	AC=14;AF=0.00370861;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,1,277,+;NS=2504;SAS_AF=0.0195;SVLEN=276;SVTYPE=ALU;TSD=AAAAATACCTCTCCAC	GT	0
X	26182841	DUP_gs.X_CNV_X_26182841_26213475	A	<CN0>,<CN2>	.	PASS	AC=2,2;AF=0.0005298,0.0005298;AFR_AF=0.002,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=26213475;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	26363143	BI_GS_DEL1_B5_P2924_276	A	<CN0>	100	PASS	AC=31;AF=0.0116556;AFR_AF=0.0319;AMR_AF=0.0076;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0026;END=26366293;EUR_AF=0.0065;MC=YL_CN_ESN_4384,UW_VH_7992;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	26415770	ALU_umary_ALU_12612	C	<INS:ME:ALU>	.	PASS	AC=31;AF=0.00821192;AFR_AF=0;AMR_AF=0.0382;AN=3775;CS=ALU_umary;EAS_AF=0.0144;EUR_AF=0;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	26481460	ALU_umary_ALU_12613	T	<INS:ME:ALU>	.	PASS	AC=18;AF=0.00476821;AFR_AF=0;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0131;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.0042;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	26662515	DEL_pindel_53354	AATAGATGTCCATATCCTTATCCCCTGAACCTGTAAGTATTTAAGATTACAGAATAAAGAAGAATTAAGGCTTCCGATTGAATTAAGATCAACAATTAGTTTACCTTAACATGGGAAGAACAACTCACATCATCCAGGTGGGTTTAATGTAATCACAATGGTCCTTATAAGTATAAAGGGAGGCGGAAAAGAAAGCGAGTAAGAAGAGATGTGATGTTGGAATTAGAAGGTAGAGTG	A	.	PASS	AC=1034;AF=0.273907;AFR_AF=0.2732;AMR_AF=0.2805;AN=3775;CS=DEL_pindel;EAS_AF=0.2762;END=26662751;EUR_AF=0.252;NS=2504;SAS_AF=0.2911;SVTYPE=DEL	GT	1
X	26662877	BI_GS_DEL1_B2_P2924_316	T	<CN0>	100	PASS	AC=7;AF=0.0121854;AFR_AF=0.014;AMR_AF=0.0057;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0118;END=26664888;EUR_AF=0.0196;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	26732761	BI_GS_DEL1_B3_P2924_25	C	<CN0>	100	PASS	AC=5;AF=0.00211921;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-51,52;CIPOS=-51,52;CS=DEL_union;EAS_AF=0;END=26737387;EUR_AF=0.0039;MC=YL_CN_ESN_4385;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	26810528	DUP_gs.X_CNV_X_26810528_26821593	T	<CN0>,<CN2>	.	PASS	AC=0,20;AF=0,0.00529801;AFR_AF=0,0.001;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=26821593;EUR_AF=0,0.0196;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	26922374	SVA_umary_SVA_835	A	<INS:ME:SVA>	.	PASS	AC=445;AF=0.117881;AFR_AF=0.0259;AMR_AF=0.0802;AN=3775;CS=SVA_umary;EAS_AF=0.1636;EUR_AF=0.1697;MEINFO=SVA,39,1627,+;NS=2504;SAS_AF=0.1699;SVLEN=1588;SVTYPE=SVA;TSD=AAGCATTCTCTA	GT	0
X	26941756	ALU_umary_ALU_12614	T	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.0028;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	26974000	YL_CN_ITU_4643	A	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=27038949;EUR_AF=0.0039;MC=BI_GS_DEL1_B3_P2924_31;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	27031915	DEL_pindel_53360	CAATAGGTTGTTTTTCAGCCCATTCACCTCCCTCCTTCTCCTATCTAGTAGTCCTTAGTTTCTATTGCTCCCATCTTTAAGTCCACATGTACTCAATGTTTACCTTCCATTTATATATCAGAACATATAGCATTTAATTTTCTGTTCCTGAGTTAATTTTCTTAAGATAATGGCCTCCAGTTGCCTCCATGTTGCTGCAAAATAGATTATTTCATTCTTTGTATGGCTACACAGTATTTCATGGTGTATATGTACTACATTTTTAAAATCCAGTCCACCATTGTTGGGTCCCTATATTGTTTCTGCGTCTTTGCTATTGTG	C	.	PASS	AC=251;AF=0.0664901;AFR_AF=0.0558;AMR_AF=0.0668;AN=3775;CS=DEL_pindel;EAS_AF=0.1139;END=27032235;EUR_AF=0.0431;NS=2504;SAS_AF=0.0557;SVTYPE=DEL	GT	1
X	27037894	BI_GS_DEL1_B5_P2925_29	T	<CN0>	100	PASS	AC=178;AF=0.229934;AFR_AF=0.2552;AMR_AF=0.2309;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0.2304;END=27038845;EUR_AF=0.205;NS=2504;SAS_AF=0.2201;SVTYPE=DEL	GT	.
X	27078143	BI_GS_DEL1_B4_P2925_8	T	<CN0>	100	PASS	AC=30;AF=0.0113907;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0013;END=27081780;EUR_AF=0.0065;MC=YL_CN_ITU_4644;NS=2504;SAS_AF=0.0487;SVTYPE=DEL	GT	.
X	27093160	UW_VH_20745	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,126;CIPOS=-191,0;CS=DEL_union;EAS_AF=0.0013;END=27098209;EUR_AF=0.0052;MC=BI_GS_DEL1_B4_P2925_12;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	27262924	BI_GS_DEL1_B4_P2925_32	T	<CN0>	100	PASS	AC=13;AF=0.0323179;AFR_AF=0.0279;AMR_AF=0.0248;AN=2542;CIEND=-41,41;CIPOS=-41,41;CS=DEL_union;EAS_AF=0.0288;END=27264660;EUR_AF=0.0457;NS=2504;SAS_AF=0.0334;SVTYPE=DEL	GT	.
X	27438780	BI_GS_DEL1_B4_P2925_56	A	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0026;END=27445808;EUR_AF=0.0052;MC=YL_CN_JPT_4682;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	27501908	ALU_umary_ALU_12615	A	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,55,187,+;NS=2504;SAS_AF=0;SVLEN=132;SVTYPE=ALU;TSD=null	GT	0
X	27556908	UW_VH_19494	A	<CN0>	100	PASS	AC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,279;CIPOS=-282,0;CS=DEL_union;EAS_AF=0;END=27565422;EUR_AF=0.0039;MC=YL_CN_ITU_4645;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	27709402	L1_umary_LINE1_3024	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,3983,4297,+;NS=2504;SAS_AF=0;SVLEN=314;SVTYPE=LINE1;TSD=null	GT	0
X	27714737	BI_GS_DEL1_B1_P2925_386	T	<CN0>	100	PASS	AC=119;AF=0.150464;AFR_AF=0.1944;AMR_AF=0.1183;AN=2542;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0.1387;END=27716219;EUR_AF=0.1084;MC=UW_VH_10200;NS=2504;SAS_AF=0.1699;SVTYPE=DEL	GT	.
X	27805772	ALU_umary_ALU_12616	A	<INS:ME:ALU>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0.004;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,281,+;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	27818932	BI_GS_DEL1_B3_P2925_24	C	<CN0>	100	PASS	AC=48;AF=0.0913907;AFR_AF=0.0828;AMR_AF=0.0935;AN=2542;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0.0838;END=27820534;EUR_AF=0.1188;NS=2504;SAS_AF=0.0808;SVTYPE=DEL	GT	.
X	27831386	ALU_umary_ALU_12617	A	<INS:ME:ALU>	.	PASS	AC=17;AF=0.00450331;AFR_AF=0.016;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,3,281,+;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	27846265	L1_umary_LINE1_3025	T	<INS:ME:LINE1>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=LINE1,50,5983,-;NS=2504;SAS_AF=0;SVLEN=5933;SVTYPE=LINE1;TSD=null	GT	0
X	27901141	YL_CN_CHB_4623	A	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=27908024;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	27921604	BI_GS_DEL1_B3_P2925_28	T	<CN0>	100	PASS	AC=10;AF=0.0108609;AFR_AF=0.015;AMR_AF=0.0095;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0.0065;END=27923920;EUR_AF=0.0117;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	27965086	UW_VH_18709	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,129;CIPOS=-96,0;CS=DEL_union;EAS_AF=0;END=27978103;EUR_AF=0.0052;MC=YL_CN_STU_4563;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	28179426	DUP_gs.X_CNV_X_28179426_28274555	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=28274555;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	28201364	DUP_gs.X_CNV_X_28201364_28308110	T	<CN0>,<CN2>	.	PASS	AC=0,6;AF=0,0.0015894;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0052;END=28308110;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	28219334	UW_VH_7937	C	<CN0>	100	PASS	AC=7;AF=0.0174834;AFR_AF=0.014;AMR_AF=0.0172;AN=2542;CIEND=0,56;CIPOS=-41,0;CS=DEL_union;EAS_AF=0.0157;END=28221818;EUR_AF=0.0339;MC=BI_GS_DEL1_B1_P2926_120,YL_CN_PUR_5626;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	28299044	UW_VH_4589	G	<CN0>	100	PASS	AC=62;AF=0.103311;AFR_AF=0.0937;AMR_AF=0.0878;AN=2542;CIEND=0,86;CIPOS=-63,0;CS=DEL_union;EAS_AF=0.1414;END=28300619;EUR_AF=0.1097;MC=BI_GS_DEL1_B1_P2926_163;NS=2504;SAS_AF=0.0808;SVTYPE=DEL	GT	.
X	28340101	ALU_umary_ALU_12618	G	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,270,+;NS=2504;SAS_AF=0;SVLEN=267;SVTYPE=ALU;TSD=null	GT	0
X	28446509	ALU_umary_ALU_12620	T	<INS:ME:ALU>	.	PASS	AC=23;AF=0.00609272;AFR_AF=0;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0.0209;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.0042;SVLEN=279;SVTYPE=ALU;TSD=TCAGCTTTCTT	GT	0
X	28520775	UW_VH_21913	G	<CN0>	100	PASS	AC=9;AF=0.00344371;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,220;CIPOS=-186,0;CS=DEL_union;EAS_AF=0.0052;END=28526025;EUR_AF=0.0065;MC=YL_CN_JPT_4685,BI_GS_DEL1_B5_P2926_371;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	28684443	YL_CN_KHV_4977	A	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=28688832;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	28697847	UW_VH_14127	T	<CN0>	100	PASS	AC=119;AF=0.181457;AFR_AF=0.1884;AMR_AF=0.1851;AN=2542;CIEND=0,253;CIPOS=-399,0;CS=DEL_union;EAS_AF=0.1649;END=28698607;EUR_AF=0.201;MC=BI_GS_DEL1_B5_P2926_521;NS=2504;SAS_AF=0.1657;SVTYPE=DEL	GT	.
X	28870137	UW_VH_19749	G	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,228;CIPOS=-295,0;CS=DEL_union;EAS_AF=0;END=28876943;EUR_AF=0.0065;MC=YL_CN_CEU_5401,BI_GS_DEL1_B4_P2926_127;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	28978946	DEL_pindel_53375	AAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGGGCGCC	A	.	PASS	AC=1039;AF=0.275232;AFR_AF=0.2672;AMR_AF=0.2615;AN=3775;CS=DEL_pindel;EAS_AF=0.2775;END=28979002;EUR_AF=0.2533;NS=2504;SAS_AF=0.3175;SVTYPE=DEL	GT	1
X	29002940	UW_VH_6883	T	<CN0>	100	PASS	AC=8;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,230;CIPOS=-228,0;CS=DEL_union;EAS_AF=0.0013;END=29009590;EUR_AF=0.0091;MC=BI_GS_DEL1_B1_P2927_3;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	29033920	DEL_pindel_53376	TGTCTAAAGAAAGTCATTGAAATAACAGGACATTCTGAAGTTTGTACTTTTACAATTCCTTAACTTTATACATGCTTAATTAAAAGTTAATAAATATTTACCAAAC	T	.	PASS	AC=1103;AF=0.292185;AFR_AF=0.2772;AMR_AF=0.2824;AN=3775;CS=DEL_pindel;EAS_AF=0.2997;END=29034025;EUR_AF=0.2846;NS=2504;SAS_AF=0.3203;SVTYPE=DEL	GT	1
X	29062877	ALU_umary_ALU_12621	A	<INS:ME:ALU>	.	PASS	AC=11;AF=0.00291391;AFR_AF=0.011;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,271,+;NS=2504;SAS_AF=0;SVLEN=268;SVTYPE=ALU;TSD=null	GT	0
X	29073909	DEL_pindel_53377	GTGTATAGCTTATAAGTCATTATGCTATTAGATTGACTTTTTAACTTACGAGAAATTGGCATTCTAATTTAGATGCATGTATATGACTTCCCATGTCTATTTTAGGATAGATTTAATCATAAAATGATTTACCTTGGGCAAATTACAATAAACTCACTTGAGTAATTAATCGAGGTGTTTCAAGGAGTTAATTTAGTTCACGTAAATAAGAACGTTGTTTCAAGGAATCATTTACCACTCTGTATTGCCATTTGGCCTAGACTTTTTCCATTTTACATCCAGAAGACAAACTGTTGATAAACTATTTGTTATTTTTTTGCTAAAAAT	G	.	PASS	AC=278;AF=0.0736424;AFR_AF=0.0329;AMR_AF=0.0763;AN=3775;CS=DEL_pindel;EAS_AF=0.1008;END=29074235;EUR_AF=0.0822;NS=2504;SAS_AF=0.0905;SVTYPE=DEL	GT	0
X	29087035	DEL_pindel_53378	TTGTAATAGTCTAGGTCAGAGTAAGTCAGAGCTGAATTAAAAATAGCTGGATACAAAACAGCTTTTCTCTTCCATGCAATAGTGTGTTTCCTCCCTAAGCCCCACTCTCTCCCAGCGAATACAGTTAGTCTTGTTTTATGAAACCAGTTAAGTTATTAAGATTCAAGCACCCAGCTTTCTTTGCTTAGCTAGCTCAGGTAAATTGCTTTAATGATGTCCATACTGTAAGGGAAGCATATTCTAATA	T	.	PASS	AC=137;AF=0.0362914;AFR_AF=0.0179;AMR_AF=0.0115;AN=3775;CS=DEL_pindel;EAS_AF=0.0537;END=29087280;EUR_AF=0.0326;NS=2504;SAS_AF=0.0655;SVTYPE=DEL	GT	0
X	29121653	ALU_umary_ALU_12622	G	<INS:ME:ALU>	.	PASS	AC=80;AF=0.021192;AFR_AF=0.0758;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=AAGAAAACACTGGGG	GT	0
X	29221641	YL_CN_IBS_4056	C	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=29228745;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	29268334	L1_umary_LINE1_3026	G	<INS:ME:LINE1>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2190,6019,-;NS=2504;SAS_AF=0;SVLEN=3829;SVTYPE=LINE1;TSD=null	GT	0
X	29270196	ALU_umary_ALU_12623	C	<INS:ME:ALU>	.	PASS	AC=11;AF=0.00291391;AFR_AF=0.01;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluY,1,268,-;NS=2504;SAS_AF=0;SVLEN=267;SVTYPE=ALU;TSD=null	GT	0
X	29341826	DEL_pindel_53383	TTTTTTATATATATATATATATATATATATATATATATATATATATATATATATATA	T	.	PASS	AC=689;AF=0.182517;AFR_AF=0.2263;AMR_AF=0.1718;AN=3775;CS=DEL_pindel;EAS_AF=0.1531;END=29341882;EUR_AF=0.1253;NS=2504;SAS_AF=0.2214;SVTYPE=DEL	GT	0
X	29372132	L1_umary_LINE1_3027	A	<INS:ME:LINE1>	.	PASS	AC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0.0057;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,5440,6005,+;NS=2504;SAS_AF=0;SVLEN=565;SVTYPE=LINE1;TSD=AAAAAATA	GT	0
X	29535983	ALU_umary_ALU_12624	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,278,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null	GT	0
X	29556712	DEL_pindel_53389	CCCAAAGTGCTAGGATTATAGGGATAAGCCACTGCTCCTGGCCAAGGTTTTTTTTTTTTTTAAAGCAATTTA	C	.	PASS	AC=1099;AF=0.291126;AFR_AF=0.2782;AMR_AF=0.2996;AN=3775;CS=DEL_pindel;EAS_AF=0.2801;END=29556783;EUR_AF=0.2781;NS=2504;SAS_AF=0.3287;SVTYPE=DEL	GT	1
X	29600102	UW_VH_6391	G	<CN0>	100	PASS	AC=15;AF=0.00556291;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,263;CIPOS=-351,0;CS=DEL_union;EAS_AF=0.0183;END=29609129;EUR_AF=0.0065;MC=YL_CN_CHS_4700,BI_GS_DEL1_B1_P2927_335;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	29602048	L1_umary_LINE1_3028	T	<INS:ME:LINE1>	.	PASS	AC=33;AF=0.00874172;AFR_AF=0.008;AMR_AF=0.0038;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0.0039;MEINFO=LINE1,2589,5018,-;NS=2504;SAS_AF=0.0265;SVLEN=2429;SVTYPE=LINE1;TSD=null	GT	0
X	29625062	ALU_umary_ALU_12625	A	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	29736350	YL_CN_FIN_4276	A	<CN0>	100	PASS	AC=16;AF=0.0312583;AFR_AF=0.0209;AMR_AF=0.0248;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0236;END=29738935;EUR_AF=0.0548;NS=2504;SAS_AF=0.0334;SVTYPE=DEL	GT	.
X	29817894	L1_umary_LINE1_3029	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,5149,5993,-;NS=2504;SAS_AF=0;SVLEN=844;SVTYPE=LINE1;TSD=null	GT	0
X	30021349	UW_VH_3575	C	<CN0>	100	PASS	AC=14;AF=0.0127152;AFR_AF=0.008;AMR_AF=0.0038;AN=2542;CIEND=0,167;CIPOS=-362,0;CS=DEL_union;EAS_AF=0.0105;END=30023422;EUR_AF=0.0222;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	.
X	30046608	BI_GS_DEL1_B1_P2928_28	T	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=-6,6;CIPOS=-6,6;CS=DEL_union;EAS_AF=0;END=30057664;EUR_AF=0.0039;MC=YL_CN_CLM_3826;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	30111950	L1_umary_LINE1_3030	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4952,5876,+;NS=2504;SAS_AF=0.0014;SVLEN=924;SVTYPE=LINE1;TSD=null	GT	0
X	30209790	ALU_umary_ALU_12626	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa3_1,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	30218098	ALU_umary_ALU_12627	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	30242851	DEL_pindel_53395	CCCAAGATCTGTTAGATACAAATGCCAGATCCCTTAAAAGTAATTAAGAAAGCACCCATCCAGAACACCGGGGTCCCGAAGAGTTCAGGCCCTGCTGTTGACCCTTGGAGGTCCTGAATTCAATGGCTGGATGAAATATAGAGAGGCCTTGAAAGATGAAGCAGAGAGAGCCTGAGCCAGAGCTGCAGCCAGGGCTGTGCTACTGCCATGGCCATGGCACATA	C	.	PASS	AC=1250;AF=0.331126;AFR_AF=0.3509;AMR_AF=0.3206;AN=3775;CS=DEL_pindel;EAS_AF=0.3102;END=30243073;EUR_AF=0.3094;NS=2504;SAS_AF=0.3565;SVTYPE=DEL	GT	1
X	30299183	DUP_gs.X_CNV_X_30299183_30308794	G	<CN0>,<CN2>	.	PASS	AC=0,13;AF=0,0.00344371;AFR_AF=0,0.013;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=30308794;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	30313490	UW_VH_18360	A	<CN0>	100	PASS	AC=8;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,133;CIPOS=-187,0;CS=DEL_union;EAS_AF=0;END=30317409;EUR_AF=0.0104;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	30347766	BI_GS_DEL1_B4_P2928_61	G	<CN0>	100	PASS	AC=135;AF=0.129007;AFR_AF=0.0877;AMR_AF=0.1088;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2042;END=30348599;EUR_AF=0.1253;MC=UW_VH_5485,EM_DL_DEL101167833;NS=2504;SAS_AF=0.1253;SVTYPE=DEL	GT	.
X	30501131	DUP_gs.X_CNV_X_30501131_30577809	A	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=30577809;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	30559712	DEL_pindel_53398	AGTTTTTGAATTGTTGGAATTTGCCATTTGATATTGGAATAAATTCTTAAATAATGTGGTTATGTTATACATAATTTTAATGGGCTTTTCTCGCTTTATGATTTTGTTTTGTTTTGTTTGTTAAAGCAAATTTAAGCGATTTTCTTATTCGAGTTCAAAACGGGTCATAAAGCAGCAGAGACAGCTTGCAACATCAACAGCGCACTTGGCCCAGAAACTGCTAACGAATGTACAGTGCGGTGGTGGTTCAAGAAGTTTTGCAAAGGAGACAATAGCTTTGAAGATGAGAGGCATAGTGGCTG	A	.	PASS	AC=1343;AF=0.355762;AFR_AF=0.4317;AMR_AF=0.3263;AN=3775;CS=DEL_pindel;EAS_AF=0.3115;END=30560013;EUR_AF=0.3159;NS=2504;SAS_AF=0.3607;SVTYPE=DEL	GT	1
X	30622593	BI_GS_DEL1_B4_P2928_93	C	<CN0>	100	PASS	AC=13;AF=0.00609272;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0013;END=30625691;EUR_AF=0.0052;MC=UW_VH_11779,YL_CN_ITU_4650,YL_CN_PJL_5010;NS=2504;SAS_AF=0.0209;SVTYPE=DEL	GT	.
X	30653506	YL_CN_CEU_5403	C	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=30658757;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	30665974	ALU_umary_ALU_12628	T	<INS:ME:ALU>	.	PASS	AC=78;AF=0.0206622;AFR_AF=0.001;AMR_AF=0.0439;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0.064;MEINFO=AluUndef,10,277,-;NS=2504;SAS_AF=0.0056;SVLEN=267;SVTYPE=ALU;TSD=CAATATTCATTCATT	GT	0
X	30676516	BI_GS_DEL1_B3_P2928_25	T	<CN0>	100	PASS	AC=14;AF=0.0304636;AFR_AF=0.0279;AMR_AF=0.0324;AN=2542;CIEND=-52,52;CIPOS=-52,52;CS=DEL_union;EAS_AF=0.0236;END=30677940;EUR_AF=0.0339;NS=2504;SAS_AF=0.0362;SVTYPE=DEL	GT	.
X	30820402	DEL_pindel_53413	GCCTTGTGCCTTCCTTGCCTTGCCTTCTGCCTGGCCTTGCCTTGCCTTGTGCCTTC	G	.	PASS	AC=456;AF=0.120795;AFR_AF=0.0837;AMR_AF=0.1298;AN=3775;CS=DEL_pindel;EAS_AF=0.1152;END=30820457;EUR_AF=0.1514;NS=2504;SAS_AF=0.1393;SVTYPE=DEL	GT	0
X	30821442	DEL_pindel_53414	TGCCTTGCCTTGCCTTGCGCCTTGCCTTGTGCCTTACCTAGCTTTGCCTTGTGCCTTACCTAGCCGTGCCTTGTGCCTTGCCTTGCCTTGCTTTGTTCTTGGCCTTGTCTTGCCACGTGTCCTGCCTTGGTTTGATTTTTGCCCTGCCTTGCCTTGCCTTGCCTTGCCTTTCCTTGTGCCTAGCCTTGCCTTGCCTTCTGTTTTGCCGTGCCTTTTTTGCCTTGCCTTGTGCCTTGACATGCCTTGCCTTGTGTCTTACTTGCCTTGCTTTGA	T	.	PASS	AC=29;AF=0.00768212;AFR_AF=0.011;AMR_AF=0.0038;AN=3775;CS=DEL_pindel;EAS_AF=0.0039;END=30821714;EUR_AF=0.0117;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	0
X	30904726	DUP_gs.X_CNV_X_30904726_31026592	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=31026592;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	31000874	UW_VH_12232	C	<CN0>	100	PASS	AC=6;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,144;CIPOS=-140,0;CS=DEL_union;EAS_AF=0;END=31006590;EUR_AF=0.0039;MC=YL_CN_ACB_5037;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	31081309	BI_GS_DEL1_B5_P2929_88	C	<CN0>	100	PASS	AC=11;AF=0.0336424;AFR_AF=0.0369;AMR_AF=0.0382;AN=2542;CIEND=-26,27;CIPOS=-26,27;CS=DEL_union;EAS_AF=0.0209;END=31085150;EUR_AF=0.0313;NS=2504;SAS_AF=0.0418;SVTYPE=DEL	GT	.
X	31155691	UW_VH_12882	A	<CN0>	100	PASS	AC=11;AF=0.0100662;AFR_AF=0.0169;AMR_AF=0.0038;AN=2542;CIEND=0,156;CIPOS=-129,0;CS=DEL_union;EAS_AF=0.0092;END=31157804;EUR_AF=0.0131;MC=BI_GS_DEL1_B5_P2929_156;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	31185139	EM_DL_DEL101168028	A	<CN0>	100	PASS	AC=161;AF=0.208477;AFR_AF=0.1834;AMR_AF=0.2156;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.1937;END=31185973;EUR_AF=0.2076;NS=2504;SAS_AF=0.2549;SVTYPE=DEL	GT	.
X	31275320	ALU_umary_ALU_12629	C	<INS:ME:ALU>	.	PASS	AC=545;AF=0.144371;AFR_AF=0.1296;AMR_AF=0.1508;AN=3775;CS=ALU_umary;EAS_AF=0.199;EUR_AF=0.0979;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1518;SVLEN=280;SVTYPE=ALU;TSD=AGAAGTGGGCGTCTC	GT	0
X	31346366	UW_VH_13004	G	<CN0>	100	PASS	AC=203;AF=0.224371;AFR_AF=0.2443;AMR_AF=0.2233;AN=2542;CIEND=0,360;CIPOS=-293,0;CS=DEL_union;EAS_AF=0.1937;END=31346887;EUR_AF=0.2402;MC=BI_GS_DEL1_B3_P2929_9;NS=2504;SAS_AF=0.2131;SVTYPE=DEL	GT	.
X	31370330	ALU_umary_ALU_12630	C	<INS:ME:ALU>	.	PASS	AC=37;AF=0.00980132;AFR_AF=0.001;AMR_AF=0.0115;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0.0339;MEINFO=AluYb7_2,1,281,+;NS=2504;SAS_AF=0.0042;SVLEN=280;SVTYPE=ALU;TSD=AAGAATGTGATACC	GT	0
X	31379318	ALU_umary_ALU_12631	T	<INS:ME:ALU>	.	PASS	AC=47;AF=0.0124503;AFR_AF=0.0449;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CTAGCTTCCCTTTTTT	GT	0
X	31418407	DEL_pindel_53434	ATGCAACCATTTATCTCTCACCTACCTGTGACCTGGAAGCCCCTCCTTGCTTCAAGTTGTCCCACCCTTCTGGATGGAACAAATGTACATCTTACATATAT	A	.	PASS	AC=542;AF=0.143576;AFR_AF=0.0768;AMR_AF=0.1737;AN=3775;CS=DEL_pindel;EAS_AF=0.1806;END=31418507;EUR_AF=0.1606;NS=2504;SAS_AF=0.1574;SVTYPE=DEL	GT	1
X	31470360	ALU_umary_ALU_12632	A	<INS:ME:ALU>	.	PASS	AC=201;AF=0.053245;AFR_AF=0.0907;AMR_AF=0.0229;AN=3775;CS=ALU_umary;EAS_AF=0.0851;EUR_AF=0.0222;MEINFO=AluYc2,1,281,-;NS=2504;SAS_AF=0.0223;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAATAGCA	GT	0
X	31505930	EM_DL_DEL101168102	A	<CN0>	100	PASS	AC=150;AF=0.18702;AFR_AF=0.1755;AMR_AF=0.1794;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.1754;END=31506850;EUR_AF=0.201;NS=2504;SAS_AF=0.2061;SVTYPE=DEL	GT	.
X	31531698	DUP_gs.X_CNV_X_31531698_31548491	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=31548491;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	31750354	L1_umary_LINE1_3031	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,2522,4010,-;NS=2504;SAS_AF=0;SVLEN=1488;SVTYPE=LINE1;TSD=null	GT	0
X	31764309	YL_CN_IBS_4060	C	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=31779911;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	31811560	BI_GS_DEL1_B1_P2929_512	A	<CN0>	100	PASS	AC=143;AF=0.194172;AFR_AF=0.2104;AMR_AF=0.187;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.1846;END=31812145;EUR_AF=0.1984;NS=2504;SAS_AF=0.1825;SVTYPE=DEL	GT	.
X	31823711	UW_VH_7001	A	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0076;AN=2542;CIEND=0,110;CIPOS=-195,0;CS=DEL_union;EAS_AF=0;END=31828029;EUR_AF=0.0039;MC=BI_GS_DEL1_B1_P2929_521;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	32001086	ALU_umary_ALU_12633	T	<INS:ME:ALU>	.	PASS	AC=780;AF=0.206623;AFR_AF=0.0449;AMR_AF=0.1889;AN=3775;CS=ALU_umary;EAS_AF=0.2605;EUR_AF=0.2272;MEINFO=AluUndef,1,258,-;NS=2504;SAS_AF=0.3663;SVLEN=257;SVTYPE=ALU;TSD=TCAGAGCTTTTGTT	GT	0
X	32038514	L1_umary_LINE1_3032	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4274,5996,+;NS=2504;SAS_AF=0;SVLEN=1722;SVTYPE=LINE1;TSD=null	GT	0
X	32068702	UW_VH_16769	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,104;CIPOS=-113,0;CS=DEL_union;EAS_AF=0;END=32078442;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	32103731	DEL_pindel_53445	ATACGTATATATATACACATATATACGTATATATATGTGTGTATATATACGTATATATACACACGCGTATATATATACGTATATATACACACGCGTATATATATACACATACACTGATATTGATGGCT	A	.	PASS	AC=1145;AF=0.303311;AFR_AF=0.2951;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.2906;END=32103858;EUR_AF=0.2859;NS=2504;SAS_AF=0.3426;SVTYPE=DEL	GT	1
X	32226507	L1_umary_LINE1_3033	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,4436,5995,-;NS=2504;SAS_AF=0;SVLEN=1559;SVTYPE=LINE1;TSD=null	GT	0
X	32235660	DEL_pindel_53451	CTGAAAGGAGTAATAAGTTCTAGTGTTCTATTGCATAGTAATATGAACAAAGTTACCAATATTGTGCTGTATATTTCAAAATAGTGAAAGAGAATTTTAAATTTTCTCACCACAGAGAAATTATAAATGTTTGAGGCTATGGATCTGCCAAGAAACCTGATTTGATCATTACACAA	C	.	PASS	AC=1148;AF=0.304106;AFR_AF=0.2971;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.2997;END=32235835;EUR_AF=0.295;NS=2504;SAS_AF=0.3343;SVTYPE=DEL	GT	1
X	32298048	DEL_pindel_53454	GTACCCCACATATATACACATATATATGTGTAACCCATATATATATGTACCCCACATATATATATATGTACCCCACATATATATATGTACCCCACATATATATA	G	.	PASS	AC=962;AF=0.254834;AFR_AF=0.2323;AMR_AF=0.2385;AN=3775;CS=DEL_pindel;EAS_AF=0.2605;END=32298151;EUR_AF=0.2533;NS=2504;SAS_AF=0.2939;SVTYPE=DEL	GT	1
X	32332915	DEL_pindel_53456	CACTGGTCATTAGAGAAATGCAAGTCAAAACCACAACGAGATAGCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACTGATGCTGGAGAAGATGTGGAGAAATAGGAACTCTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCCACCATTGTGGAAGACAGTGTGCAGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGATATATACCCAAAGGATTATAAATCATCCTACTATAAAGACACATGCACACGTATGTTTATTGCAGCACTGTTCACAATAGCAAAGAATTGCAACCAACCCAAATGCCCACCAGTGATAGACTGGATAAAGAAAAT	C	.	PASS	AC=920;AF=0.243709;AFR_AF=0.2144;AMR_AF=0.2347;AN=3775;CS=DEL_pindel;EAS_AF=0.2539;END=32333290;EUR_AF=0.2454;NS=2504;SAS_AF=0.2786;SVTYPE=DEL	GT	1
X	32354096	DEL_pindel_53457	TGTTATATATAACGTGTATATATAACGTTATATATAACGTGTATATATAAC	T	.	PASS	AC=1163;AF=0.308079;AFR_AF=0.2931;AMR_AF=0.3168;AN=3775;CS=DEL_pindel;EAS_AF=0.2866;END=32354146;EUR_AF=0.3068;NS=2504;SAS_AF=0.3468;SVTYPE=DEL	GT	1
X	32379285	L1_umary_LINE1_3034	A	<INS:ME:LINE1>	.	PASS	AC=55;AF=0.0145695;AFR_AF=0;AMR_AF=0.0992;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0.0026;MEINFO=LINE1,4825,5140,-;NS=2504;SAS_AF=0;SVLEN=315;SVTYPE=LINE1;TSD=null	GT	0
X	32391263	BI_GS_DEL1_B4_P2930_47	A	<CN0>	100	PASS	AC=360;AF=0.332715;AFR_AF=0.329;AMR_AF=0.3111;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.3063;END=32391578;EUR_AF=0.3316;NS=2504;SAS_AF=0.383;SVTYPE=DEL	GT	.
X	32423300	YL_CN_PJL_5012	A	<CN0>	100	PASS	AC=70;AF=0.132185;AFR_AF=0.1555;AMR_AF=0.1126;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1178;END=32425758;EUR_AF=0.1358;NS=2504;SAS_AF=0.1253;SVTYPE=DEL	GT	.
X	32430304	BI_GS_DEL1_B3_P2930_24	A	<CN0>	100	PASS	AC=44;AF=0.0839735;AFR_AF=0.0818;AMR_AF=0.0744;AN=2542;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.0838;END=32431577;EUR_AF=0.0927;NS=2504;SAS_AF=0.085;SVTYPE=DEL	GT	.
X	32430687	L1_umary_LINE1_3035	T	<INS:ME:LINE1>	.	PASS	AC=8;AF=0.00211921;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,3786,-;NS=2504;SAS_AF=0.0111;SVLEN=3785;SVTYPE=LINE1;TSD=null	GT	0
X	32468501	DEL_pindel_53460	TGATTGAAATCTTTAGTTCAATATTCTAAATAAATCAGCTTTTTGGCATCACTGAGCATAGAGATTGTTTTTACACAAATTGCATTTTGACTTTAGTAATTATAGTATAATCAACAAGTTTGATTACCATTCATCATTTAATATGTGCTACTGTGTTCTGTGCCAGCCATGTCATAAGTGCTACCTCATTAGATCTTTACCCAAACCTTCTCGGATGTGTTTTGTTACCTCTATATTGGACATTAGAAAACTGAGGTTCAGAGAGTTTAAGGAAATCATCCTCAGAGTTATATCCTCTCTTTCTCATAGTTTCTGTTAAGCGGGTCTCAAATGTTCCATGAGCTGAAGAAGGAGCATGCTGTAGTCAGTCTAATGAATAAAATTACAATTTATGCTCATTATAAATAACCCAAGCAACTATATAAAAATGTA	T	.	PASS	AC=543;AF=0.143841;AFR_AF=0.1256;AMR_AF=0.1412;AN=3775;CS=DEL_pindel;EAS_AF=0.1649;END=32468932;EUR_AF=0.1632;NS=2504;SAS_AF=0.1281;SVTYPE=DEL	GT	1
X	32550298	UW_VH_15523	T	<CN0>	100	PASS	AC=11;AF=0.00397351;AFR_AF=0.008;AMR_AF=0;AN=2542;CIEND=0,184;CIPOS=-182,0;CS=DEL_union;EAS_AF=0.0026;END=32553844;EUR_AF=0.0065;MC=YL_CN_ASW_4517,BI_GS_DEL1_B5_P2930_451;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	32679357	ALU_umary_ALU_12634	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluYa2,32,222,-;NS=2504;SAS_AF=0;SVLEN=190;SVTYPE=ALU;TSD=null	GT	0
X	32682318	BI_GS_DEL1_B3_P2930_37	T	<CN0>	100	PASS	AC=7;AF=0.0188079;AFR_AF=0.0179;AMR_AF=0.0191;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0.0183;END=32684596;EUR_AF=0.0235;NS=2504;SAS_AF=0.0153;SVTYPE=DEL	GT	.
X	32701649	UW_VH_7142	C	<CN0>	100	PASS	AC=144;AF=0.184636;AFR_AF=0.1815;AMR_AF=0.1737;AN=2542;CIEND=0,262;CIPOS=-270,0;CS=DEL_union;EAS_AF=0.2134;END=32702687;EUR_AF=0.1593;MC=BI_GS_DEL1_B2_P2930_349;NS=2504;SAS_AF=0.1936;SVTYPE=DEL	GT	.
X	32721051	BI_GS_DEL1_B5_P2930_585	T	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0;END=32810353;EUR_AF=0.0065;MC=YL_CN_ASW_4518;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	32732633	UW_VH_18663	G	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=0,217;CIPOS=-134,0;CS=DEL_union;EAS_AF=0;END=32739759;EUR_AF=0.0052;MC=BI_GS_DEL1_B3_P2930_39;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	32738366	UW_VH_7131	C	<CN0>	100	PASS	AC=9;AF=0.00291391;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=0,157;CIPOS=-140,0;CS=DEL_union;EAS_AF=0.0013;END=32748132;EUR_AF=0.0052;MC=BI_GS_DEL1_B3_P2930_41,YL_CN_GWD_5814;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	32745923	ALU_umary_ALU_12635	T	<INS:ME:ALU>	.	PASS	AC=69;AF=0.0182781;AFR_AF=0.0678;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYa5,24,281,-;NS=2504;SAS_AF=0;SVLEN=257;SVTYPE=ALU;TSD=AAAATATATTCCAATTCACTTT	GT	0
X	32761413	DUP_gs.X_CNV_X_32761413_32827319	C	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=32827319;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	32767842	DUP_gs.X_CNV_X_32767842_32805506	A	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=32805506;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	32799269	L1_umary_LINE1_3036	T	<INS:ME:LINE1>	.	PASS	AC=5;AF=0.0013245;AFR_AF=0.004;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5444,5898,-;NS=2504;SAS_AF=0;SVLEN=454;SVTYPE=LINE1;TSD=null	GT	0
X	32857913	BI_GS_DEL1_B1_P2930_505	C	<CN0>	100	PASS	AC=6;AF=0.00397351;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=-43,43;CIPOS=-43,43;CS=DEL_union;EAS_AF=0.0013;END=32861015;EUR_AF=0.0078;MC=YL_CN_CLM_3828;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	32882429	BI_GS_DEL1_B3_P2930_47	A	<CN0>	100	PASS	AC=8;AF=0.0333775;AFR_AF=0.0259;AMR_AF=0.0382;AN=2542;CIEND=-23,23;CIPOS=-23,23;CS=DEL_union;EAS_AF=0.0249;END=32884150;EUR_AF=0.0509;NS=2504;SAS_AF=0.0306;SVTYPE=DEL	GT	.
X	32886350	BI_GS_DEL1_B2_P2930_433	C	<CN0>	100	PASS	AC=211;AF=0.235232;AFR_AF=0.2473;AMR_AF=0.2328;AN=2542;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0.1924;END=32886923;EUR_AF=0.2833;NS=2504;SAS_AF=0.2145;SVTYPE=DEL	GT	.
X	32919526	BI_GS_DEL1_B2_P2930_444	T	<CN0>	100	PASS	AC=54;AF=0.0601325;AFR_AF=0.0917;AMR_AF=0.0496;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.051;END=32921434;EUR_AF=0.0444;MC=YL_CN_GWD_5815,UW_VH_11947,YL_CN_ACB_5039;NS=2504;SAS_AF=0.0501;SVTYPE=DEL	GT	.
X	32929263	BI_GS_DEL1_B3_P2930_52	C	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-25,25;CIPOS=-25,25;CS=DEL_union;EAS_AF=0;END=32969890;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	32987321	BI_GS_DEL1_B2_P2930_476	T	<CN0>	100	PASS	AC=816;AF=0.339073;AFR_AF=0.5484;AMR_AF=0.1794;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2827;END=32989080;EUR_AF=0.1789;MC=EM_DL_DEL101168475,YL_CN_LWK_4156,YL_CN_ACB_5040,UW_VH_1297,YL_CN_YRI_5531,YL_CN_MSL_4005;NS=2504;SAS_AF=0.3942;SVTYPE=DEL	GT	.
X	33008942	DEL_pindel_53469	ACACAAGGAGAAACTGTATGTGCCTGTTCTTGAAACCCACAGCAGTAATGGTAACAGAAGAATAACAAGAATACATATCTTGATTCCATATACCAAGCTTTATCCTAGAAAAGGTTGGGATTACTGGACTTAAAAGAACATGGTATTCCGTAATCAGACAACCTTAATTTGGGACCATTCTGGAGACTGCTTACCACAGTGATAATTATACCTAATTTGTTAAAATTCATTTTTTCCAATTATAATAATAATTAGAAAACTATAAAAGTATACAAATGCAGTACGTTTTATCTTAGTTTTCTTCTACTTCAAAATTATATATATTATCTAAAATTTGTTTTTCTTTTCAGGTTATTTCTAAGGTACTTTGATTTTTGTTAAATAATTCAGTTTAAATTCCACGTTTTTATGTAGAAAAAAATCAAGGATTTGATTTCTCTTATATTCAAAAGTGCAATCGTTTTCTTTCTACATTGAGATGAAAGTATTTTGGAGCATAAACAATACACGCTAAATAATTG	A	.	PASS	AC=833;AF=0.220662;AFR_AF=0.2044;AMR_AF=0.2176;AN=3775;CS=DEL_pindel;EAS_AF=0.2317;END=33009462;EUR_AF=0.2324;NS=2504;SAS_AF=0.2214;SVTYPE=DEL	GT	1
X	33135645	DUP_gs.X_CNV_X_33135645_33264774	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=33264774;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	33208976	DEL_pindel_53475	AATATTATATATATATATATAATATATAATATTATATATTATATAATATATAATATTATATATATAATATTATATATATATATAATATATAATATTATATATATATATAATATATAATATTATATATATATATATAATATATAATATTAT	A	.	PASS	AC=750;AF=0.198675;AFR_AF=0.1505;AMR_AF=0.2462;AN=3775;CS=DEL_pindel;EAS_AF=0.1531;END=33209125;EUR_AF=0.2402;NS=2504;SAS_AF=0.2354;SVTYPE=DEL	GT	0
X	33209489	UW_VH_22200	T	<CN0>	100	PASS	AC=5;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,124;CIPOS=-140,0;CS=DEL_union;EAS_AF=0;END=33216353;EUR_AF=0.0039;MC=BI_GS_DEL1_B5_P2931_139,YL_CN_YRI_5532;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	33302850	ALU_umary_ALU_12636	C	<INS:ME:ALU>	.	PASS	AC=993;AF=0.263046;AFR_AF=0.1775;AMR_AF=0.2061;AN=3775;CS=ALU_umary;EAS_AF=0.3154;EUR_AF=0.3642;MEINFO=AluUndef,7,279,+;NS=2504;SAS_AF=0.2604;SVLEN=272;SVTYPE=ALU;TSD=AAAAATCATC	GT	1
X	33331251	DUP_gs.X_CNV_X_33331251_33487391	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=33487391;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	33399054	L1_umary_LINE1_3037	C	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4715,6011,-;NS=2504;SAS_AF=0;SVLEN=1296;SVTYPE=LINE1;TSD=null	GT	0
X	33599548	DUP_gs.X_CNV_X_33599548_33666882	A	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=33666882;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	33653319	DUP_gs.X_CNV_X_33653319_33801436	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=33801436;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	33666126	DUP_gs.X_CNV_X_33666126_33727911	T	<CN0>,<CN2>	.	PASS	AC=2,2;AF=0.0005298,0.0005298;AFR_AF=0.002,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=33727911;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	33712810	UW_VH_20927	G	<CN0>	100	PASS	AC=221;AF=0.254834;AFR_AF=0.2652;AMR_AF=0.25;AN=2542;CIEND=0,251;CIPOS=-102,0;CS=DEL_union;EAS_AF=0.2592;END=33713294;EUR_AF=0.2624;NS=2504;SAS_AF=0.2312;SVTYPE=DEL	GT	.
X	33766060	ALU_umary_ALU_12637	C	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.001;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,2,276,+;NS=2504;SAS_AF=0;SVLEN=274;SVTYPE=ALU;TSD=null	GT	0
X	33838634	DUP_gs.X_CNV_X_33838634_33843183	A	<CN0>,<CN2>	.	PASS	AC=72,1;AF=0.0190728,0.0002649;AFR_AF=0.0439,0;AMR_AF=0.0134,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=33843183;EUR_AF=0.0078,0;MC=UW_VH_7541,BI_GS_DEL1_B2_P2931_331,YL_CN_ESN_4390;NS=2504;SAS_AF=0.0209,0.0014;SVTYPE=CNV	GT	0
X	34014937	BI_GS_DEL1_B5_P2932_11	A	<CN0>	100	PASS	AC=61;AF=0.124768;AFR_AF=0.1196;AMR_AF=0.1221;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1126;END=34015879;EUR_AF=0.1358;NS=2504;SAS_AF=0.1351;SVTYPE=DEL	GT	.
X	34042872	YL_CN_ITU_4658	A	<CN0>	100	PASS	AC=16;AF=0.00476821;AFR_AF=0.002;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=34073166;EUR_AF=0.0117;MC=BI_GS_DEL1_B2_P2932_22,UW_VH_4614;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	34059695	DEL_pindel_53479	GTGCACAAGTAATTGCGGTTTTTGCCAAATGGCAAAAACCGCAATTACTTGTGCACCAACCTAATACTATAA	G	.	PASS	AC=1105;AF=0.292715;AFR_AF=0.2861;AMR_AF=0.2824;AN=3775;CS=DEL_pindel;EAS_AF=0.2853;END=34059766;EUR_AF=0.2859;NS=2504;SAS_AF=0.3245;SVTYPE=DEL	GT	0
X	34153303	BI_GS_DEL1_B5_P2932_110	C	<CN0>	100	PASS	AC=14;AF=0.0103311;AFR_AF=0.009;AMR_AF=0.0095;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0026;END=34155879;EUR_AF=0.0196;MC=YL_CN_TSI_4376;NS=2504;SAS_AF=0.0111;SVTYPE=DEL	GT	.
X	34186496	UW_VH_16005	T	<CN0>	100	PASS	AC=7;AF=0.00847682;AFR_AF=0.003;AMR_AF=0.0076;AN=2542;CIEND=0,307;CIPOS=-486,0;CS=DEL_union;EAS_AF=0.0052;END=34190012;EUR_AF=0.0157;MC=YL_CN_PJL_5017,BI_GS_DEL1_B3_P2932_6;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	.
X	34242454	ALU_umary_ALU_12638	G	<INS:ME:ALU>	.	PASS	AC=1333;AF=0.353113;AFR_AF=0.2802;AMR_AF=0.3569;AN=3775;CS=ALU_umary;EAS_AF=0.4437;EUR_AF=0.2676;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.4471;SVLEN=280;SVTYPE=ALU;TSD=AAAGAAATATG	GT	1
X	34293483	ALU_umary_ALU_12639	T	<INS:ME:ALU>	.	PASS	AC=164;AF=0.0434437;AFR_AF=0.0229;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0.1309;EUR_AF=0.0131;MEINFO=AluYa5,14,281,-;NS=2504;SAS_AF=0.0362;SVLEN=267;SVTYPE=ALU;TSD=GTGTTTCTT	GT	0
X	34386583	BI_GS_DEL1_B2_P2932_177	A	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-51,51;CIPOS=-51,51;CS=DEL_union;EAS_AF=0.0013;END=34401708;EUR_AF=0.0052;MC=UW_VH_11615,YL_CN_CDX_3811;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	34438376	YL_CN_MSL_4007	A	<CN0>	100	PASS	AC=543;AF=0.219868;AFR_AF=0.1645;AMR_AF=0.1794;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4031;END=34443008;EUR_AF=0.1214;MC=YL_CN_LWK_4159,YL_CN_JPT_4689;NS=2504;SAS_AF=0.2368;SVTYPE=DEL	GT	.
X	34464346	ALU_umary_ALU_12640	A	<INS:ME:ALU>	.	PASS	AC=58;AF=0.0153642;AFR_AF=0.001;AMR_AF=0.0229;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0548;MEINFO=AluUndef,3,270,-;NS=2504;SAS_AF=0.0042;SVLEN=267;SVTYPE=ALU;TSD=AAAAAACTTCCATGA	GT	0
X	34531540	L1_umary_LINE1_3038	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,2824,+;NS=2504;SAS_AF=0;SVLEN=2823;SVTYPE=LINE1;TSD=null	GT	0
X	34747567	L1_umary_LINE1_3039	C	<INS:ME:LINE1>	.	PASS	AC=14;AF=0.00370861;AFR_AF=0.014;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4366,6019,+;NS=2504;SAS_AF=0;SVLEN=1653;SVTYPE=LINE1;TSD=AAAAAGATGTTTTCC	GT	0
X	34858179	DUP_gs.X_CNV_X_34858179_34875400	A	<CN0>,<CN2>	.	PASS	AC=0,20;AF=0,0.00529801;AFR_AF=0,0.0199;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=34875400;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	34942088	L1_umary_LINE1_3040	T	<INS:ME:LINE1>	.	PASS	AC=54;AF=0.0143046;AFR_AF=0.0528;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4633,6018,-;NS=2504;SAS_AF=0;SVLEN=1385;SVTYPE=LINE1;TSD=null	GT	0
X	34957236	DEL_pindel_53487	GCTTCTCTCCTAAAATGTTACTATTTTTCCCTTTCCATATTCTGTTTTTTAGAATCCAGCCCACACTCTGGGGAGGGCATTTAAATTTCACCTGCTGGAGGGAGGAGTATCTATGTACATTTTTTGAAATTCTTTGTAAGAAAGACTTTTACCTTTCTCCTCATTTATTTATTTGTACAATTATTTATATCAGTATGGACTCATGAATATTTTATTTTATACTGTGTTATAATTTTTAAATTTTAATTCATTTTGTTGCTTAAATTGTTTTAACTTTGGCCATCGAGTGCTCTTTCAGTGTGGCTCCTGATCTGCTTTTATTCTTTTGTTTTCTGAGCACTTCTGTATTTTCTGGCATTACATAATACTCCAGGCTCATCTTGTGTTTTCACTGCCCCAGGCCTAGAATTACTCATTTCTCCAAGGATGTCTGTTTTTTGTTTTGCATTTGTTATTTTGGAGAATGGTATTTAGAAACCAAGATCTGGGCACTGGAGGTACCTGTTGCTAATTGGGTGTCATTTTTTT	G	.	PASS	AC=927;AF=0.245563;AFR_AF=0.2363;AMR_AF=0.2576;AN=3775;CS=DEL_pindel;EAS_AF=0.2526;END=34957763;EUR_AF=0.2324;NS=2504;SAS_AF=0.2563;SVTYPE=DEL	GT	1
X	34987883	L1_umary_LINE1_3041	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,4483,4790,+;NS=2504;SAS_AF=0;SVLEN=307;SVTYPE=LINE1;TSD=null	GT	0
X	34992622	L1_umary_LINE1_3042	C	<INS:ME:LINE1>	.	PASS	AC=7;AF=0.0018543;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,5574,6009,+;NS=2504;SAS_AF=0.007;SVLEN=435;SVTYPE=LINE1;TSD=AACTC	GT	0
X	35012584	ALU_umary_ALU_12641	T	<INS:ME:ALU>	.	PASS	AC=78;AF=0.0206622;AFR_AF=0.0768;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,274,-;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=TAGACTATATTCTT	GT	0
X	35027353	DEL_pindel_53490	AGGAACCTGAAGATACTTATTAGGAATACTAGTTTTTAGCCTTAGAACAATG	A	.	PASS	AC=1192;AF=0.315762;AFR_AF=0.321;AMR_AF=0.3034;AN=3775;CS=DEL_pindel;EAS_AF=0.2945;END=35027404;EUR_AF=0.3081;NS=2504;SAS_AF=0.3482;SVTYPE=DEL	GT	1
X	35028103	ALU_umary_ALU_12642	G	<INS:ME:ALU>	.	PASS	AC=2306;AF=0.610861;AFR_AF=0.5055;AMR_AF=0.6431;AN=3775;CS=ALU_umary;EAS_AF=0.712;EUR_AF=0.6123;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.6253;SVLEN=280;SVTYPE=ALU;TSD=AAAAACGGCAATGAG	GT	1
X	35064121	L1_umary_LINE1_3043	C	<INS:ME:LINE1>	.	PASS	AC=16;AF=0.00423841;AFR_AF=0;AMR_AF=0.0076;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0131;MEINFO=LINE1,1,4675,+;NS=2504;SAS_AF=0.0028;SVLEN=4674;SVTYPE=LINE1;TSD=TAAAACTGCATTTCC	GT	0
X	35100607	ALU_umary_ALU_12643	C	<INS:ME:ALU>	.	PASS	AC=5;AF=0.0013245;AFR_AF=0.005;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,13,261,+;NS=2504;SAS_AF=0;SVLEN=248;SVTYPE=ALU;TSD=null	GT	0
X	35266960	ALU_umary_ALU_12644	G	<INS:ME:ALU>	.	PASS	AC=40;AF=0.010596;AFR_AF=0.0389;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_4,1,274,+;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=null	GT	0
X	35308066	DUP_gs.X_CNV_X_35308066_35484789	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=35484789;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	35323501	UW_VH_8567	A	<CN0>	100	PASS	AC=203;AF=0.20106;AFR_AF=0.2542;AMR_AF=0.1947;AN=2542;CIEND=0,384;CIPOS=-266,0;CS=DEL_union;EAS_AF=0.1492;END=35324110;EUR_AF=0.2154;MC=BI_GS_DEL1_B5_P2933_244;NS=2504;SAS_AF=0.1713;SVTYPE=DEL	GT	.
X	35391199	L1_umary_LINE1_3044	T	<INS:ME:LINE1>	.	PASS	AC=20;AF=0.00529801;AFR_AF=0.0199;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4512,6019,-;NS=2504;SAS_AF=0;SVLEN=1507;SVTYPE=LINE1;TSD=null	GT	0
X	35419176	ALU_umary_ALU_12645	T	<INS:ME:ALU>	.	PASS	AC=46;AF=0.0121854;AFR_AF=0.0429;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=TATTT	GT	0
X	35441649	DUP_gs.X_CNV_X_35441649_35445201	A	<CN0>,<CN2>	.	PASS	AC=29,3;AF=0.00768212,0.0007947;AFR_AF=0.0279,0.001;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=35445201;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	35441717	BI_GS_DEL1_B1_P2933_244	G	<CN0>	100	PASS	AC=28;AF=0.0116556;AFR_AF=0.0309;AMR_AF=0.0038;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0052;END=35445295;EUR_AF=0.0091;MC=UW_VH_7542,YL_CN_ESN_4393,YL_CN_MSL_4008;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	35549079	UW_VH_11685	A	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,293;CIPOS=-315,0;CS=DEL_union;EAS_AF=0.0013;END=35553722;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	35627442	BI_GS_DEL1_B2_P2933_295	T	<CN0>	100	PASS	AC=65;AF=0.0238411;AFR_AF=0.0818;AMR_AF=0.0057;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=35634397;EUR_AF=0.0065;MC=UW_VH_8095,YL_CN_ESN_4394;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	35655992	ALU_umary_ALU_12646	T	<INS:ME:ALU>	.	PASS	AC=22;AF=0.00582781;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb7_3,1,274,+;NS=2504;SAS_AF=0.0306;SVLEN=273;SVTYPE=ALU;TSD=null	GT	0
X	35671820	ALU_umary_ALU_12647	T	<INS:ME:ALU>	.	PASS	AC=20;AF=0.00529801;AFR_AF=0.0199;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,279,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	35710355	DEL_pindel_53499	TATAGCATTTTATATATACTATATATAATATATATAGCATTATATATATACTATATATAATATATATAGCATTATATATACTATATATAATATATATAGCATTATATATACTATATATACTATATATAGTATTTTATATATATACTATATATACTATATATAGTATTATATATATAAACTATATATAGCATTTTACATATAAACTATATATAGTATTATATATATGCTATAC	T	.	PASS	AC=1085;AF=0.287417;AFR_AF=0.3111;AMR_AF=0.313;AN=3775;CS=DEL_pindel;EAS_AF=0.2238;END=35710586;EUR_AF=0.2937;NS=2504;SAS_AF=0.2967;SVTYPE=DEL	GT	0
X	35714095	BI_GS_DEL1_B4_P2933_99	A	<CN0>	100	PASS	AC=126;AF=0.0627815;AFR_AF=0.1785;AMR_AF=0.0344;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0131;END=35716002;EUR_AF=0.03;MC=UW_VH_12719,YL_CN_MSL_4010,YL_CN_GWD_5823,YL_CN_ESN_4395,UW_VH_7543;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	35727018	BI_GS_DEL1_B3_P2933_18	A	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-23,24;CIPOS=-23,24;CS=DEL_union;EAS_AF=0;END=35735906;EUR_AF=0.0052;MC=YL_CN_ESN_4396;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	35857036	BI_GS_DEL1_B1_P2933_481	G	<CN0>	100	PASS	AC=11;AF=0.00317881;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.0026;END=35878354;EUR_AF=0.0052;MC=YL_CN_CHS_4704;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	35876507	DEL_pindel_53502	CTTTATAATGACTAATGAAGTTAAGTCAAAAAATTATCTGTAAACCATAGGAACCATTAACAGTTCTGCTATTTGCATCCTTACATCTTTAATGGTTAATTCCAAAGAATTCTCAGTGGAGGCAATAGTCATTAAATATATTATCTGAATCATTATCTGCAACCTGCTGATAACCAAAAGCTAAAAATCCCACAGTGATGACATGAACCCATATAAACACAGCAATCTCATTTTCATTAAGCCATTCCTTAGAAATGTGTAATGTACTTATTTTAGAAGAGAGCCAAGAACTAGCTAAAACATAAACGAAGTAATTTTTATGGGTTATTTTTATTTTATCTCTTAAATAATTTCAGCATG	C	.	PASS	AC=55;AF=0.0145695;AFR_AF=0.014;AMR_AF=0.0229;AN=3775;CS=DEL_pindel;EAS_AF=0.0157;END=35876866;EUR_AF=0.0104;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	0
X	35879047	DUP_gs.X_CNV_X_35879047_35891337	T	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=35891337;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	35901427	UW_VH_7295	C	<CN0>	100	PASS	AC=12;AF=0.029404;AFR_AF=0.0299;AMR_AF=0.0229;AN=2542;CIEND=0,240;CIPOS=-240,0;CS=DEL_union;EAS_AF=0.0301;END=35903509;EUR_AF=0.0274;MC=BI_GS_DEL1_B1_P2933_498;NS=2504;SAS_AF=0.0348;SVTYPE=DEL	GT	.
X	35987025	ALU_umary_ALU_12648	T	<INS:ME:ALU>	.	PASS	AC=25;AF=0.00662252;AFR_AF=0.0239;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	36036371	DEL_pindel_53507	TTGATGTAGTCTGTAGATTTTTCCAAATACAAAATAATGTTGCTCTGCAAACAAGGTTATTTTTACCTCCTCCTTTCCAATTTGTATGCCTTTATTTCTTTCTCTTGTTTGATTGCTCTGGCTAGGATTTCCAGTACTATGTTGAGTAACAGTGGAGAAAGTGAGTATCCTTGTCATGTTTCATATCTTAGAGGAAGGCTTTCAGTTTGATACTATCTGTGGGTCTGTCATGTATGACTTTTATTACGTTGAGGAATTGTCCTTCTATCTCCAGTTTTTTGAGGGCTTTTATCATGAAAGGATGTTGAATTTTATCAAGTGTTCTTTCAGCATTAATGGAAATGATCACATGGTTTTTGTCCTTCATTCTGTTGATATGATGTATCACATTGATTGATTTACATATATTATTCCATTCTTGCATCCCAGGGATAAATCCCACTTGGTCATGATGAATGATCATTTTAATATATTGCTGAATTTGATTTGCTAGTATTTTGTTGAAGATTTTTGCATCAATATTCATCAGCGATATTGGCCTGTCCTATCTTTTTTTTTTTTTTAAATGCGTCATTGTCTGGTTTTGGTATCAGAGGAATACTGGCCTCATAGAATGAATTTGGAAGTATTCCATTGTCTTCTGTTTTTCAGAATAGTTTGAGGAGGATTGGTATTAGTTCTTTAAA	T	.	PASS	AC=758;AF=0.200795;AFR_AF=0.1904;AMR_AF=0.2118;AN=3775;CS=DEL_pindel;EAS_AF=0.2081;END=36037056;EUR_AF=0.2076;NS=2504;SAS_AF=0.1922;SVTYPE=DEL	GT	1
X	36292921	NUMT_umich_MERGED_NUMT_203	T	<INS:MT>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CIEND=-270,0;CIPOS=0,270;CS=NUMT_umich;EAS_AF=0;END=36293190;EUR_AF=0;MEND=15718;MLEN=5358;MSTART=6235;NS=2504;SAS_AF=0;SVTYPE=INS	GT	0
X	36352693	ALU_umary_ALU_12649	G	<INS:ME:ALU>	.	PASS	AC=30;AF=0.00794702;AFR_AF=0.0299;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	36475654	BI_GS_DEL1_B5_P2934_334	A	<CN0>	100	PASS	AC=77;AF=0.108609;AFR_AF=0.1216;AMR_AF=0.1317;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.089;END=36476549;EUR_AF=0.1097;MC=UW_VH_9206;NS=2504;SAS_AF=0.0933;SVTYPE=DEL	GT	.
X	36512038	DEL_pindel_53515	ATTTTAAAGTGTACAGGTCAGTAATTTTAAATACATTCACGTTGTTGTACAACAAATCTCTACAACTTCTTT	A	.	PASS	AC=989;AF=0.261987;AFR_AF=0.2642;AMR_AF=0.2519;AN=3775;CS=DEL_pindel;EAS_AF=0.2421;END=36512109;EUR_AF=0.2493;NS=2504;SAS_AF=0.3008;SVTYPE=DEL	GT	1
X	36591669	DUP_gs.X_CNV_X_36591669_36764601	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=36764601;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	36644458	DUP_gs.X_CNV_X_36644458_36650082	A	<CN0>,<CN2>	.	PASS	AC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=36650082;EUR_AF=0,0.0039;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	36667849	YL_CN_JPT_4691	C	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=36737862;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	36743043	DEL_pindel_53520	ATTGCATGGCAAGATGTGTACAGATGGAAGAGGAGGAAGTCAGCCTGTGGCATTACATGGCAAGAGGTGTATAGATGGAAAGTGCAGAAAGGCTATGAGAGGCCACCCAGACTGCTTATGGCTGGAGGATTCATCAAGTCTAGGGGTGGACTTGGCAAGAGATAATGGATGAAGTGTACATCAAGTCTAGAAAAGAACATAGTAGAAAGTGGATAAATGAAGTTTGCAGTGGGCCTAGGGTGGGATCTGGCAGGAAGTTCAGGGGTGGAGTTAACACCCAGTATTAGGTAAGACTTGGGAAATGGGGGAGTAATGGG	A	.	PASS	AC=1491;AF=0.394967;AFR_AF=0.332;AMR_AF=0.3969;AN=3775;CS=DEL_pindel;EAS_AF=0.3704;END=36743359;EUR_AF=0.4047;NS=2504;SAS_AF=0.4972;SVTYPE=DEL	GT	1
X	36743057	DEL_pindel_53521	TGTGTACAGATGGAAGAGGAGGAAGTCAGCCTGTGGCATTACATGGCAAGAG	T	.	PASS	AC=1048;AF=0.277616;AFR_AF=0.334;AMR_AF=0.2519;AN=3775;CS=DEL_pindel;EAS_AF=0.2723;END=36743108;EUR_AF=0.2467;NS=2504;SAS_AF=0.2563;SVTYPE=DEL	GT	0
X	36763991	DUP_gs.X_CNV_X_36763991_36773403	A	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=36773403;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	36907823	BI_GS_DEL1_B3_P2934_42	A	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-54,55;CIPOS=-54,55;CS=DEL_union;EAS_AF=0;END=36933646;EUR_AF=0.0065;MC=YL_CN_PJL_5022;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	36983092	BI_GS_DEL1_B3_P2934_46	T	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-28,28;CIPOS=-28,28;CS=DEL_union;EAS_AF=0;END=36988457;EUR_AF=0.0039;MC=YL_CN_MSL_4013;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	37031097	DUP_gs.X_CNV_X_37031097_37034385	C	<CN0>,<CN2>	.	PASS	AC=182,2;AF=0.0482119,0.0005298;AFR_AF=0.1675,0;AMR_AF=0.0267,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=37034385;EUR_AF=0,0.0013;MC=YL_CN_LWK_4164,BI_GS_DEL1_B1_P2935_14,UW_VH_7624,YL_CN_ASW_4524;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	37037673	DEL_pindel_53526	GATCTACGTCAGACAATGTGTATGACAACAATGTACTACTCTTCCTATTCCTAACACTTCTGA	G	.	PASS	AC=371;AF=0.0982781;AFR_AF=0.0518;AMR_AF=0.1031;AN=3775;CS=DEL_pindel;EAS_AF=0.1243;END=37037735;EUR_AF=0.1227;NS=2504;SAS_AF=0.1058;SVTYPE=DEL	GT	0
X	37066160	BI_GS_DEL1_B5_P2935_51	A	<CN0>	100	PASS	AC=128;AF=0.0659603;AFR_AF=0.1844;AMR_AF=0.0534;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0118;END=37067856;EUR_AF=0.0235;MC=UW_VH_7625,UW_VH_17651,YL_CN_PUR_5638,EM_DL_DEL101169514;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	.
X	37195798	L1_umary_LINE1_3045	T	<INS:ME:LINE1>	.	PASS	AC=11;AF=0.00291391;AFR_AF=0.011;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,6019,-;NS=2504;SAS_AF=0;SVLEN=6018;SVTYPE=LINE1;TSD=null	GT	0
X	37242570	L1_umary_LINE1_3046	C	<INS:ME:LINE1>	.	PASS	AC=59;AF=0.0156291;AFR_AF=0.0558;AMR_AF=0.0057;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4978,6018,-;NS=2504;SAS_AF=0;SVLEN=1040;SVTYPE=LINE1;TSD=GGATC	GT	0
X	37291685	DUP_gs.X_CNV_X_37291685_37316024	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=37316024;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	37354638	DUP_gs.X_CNV_X_37354638_37368276	A	<CN0>,<CN2>	.	PASS	AC=34,34;AF=0.00900662,0.00900662;AFR_AF=0,0.0289;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=37368276;EUR_AF=0,0;NS=2504;SAS_AF=0.0474,0.0014;SVTYPE=CNV	GT	0
X	37436552	L1_umary_LINE1_3047	A	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,69,5738,+;NS=2504;SAS_AF=0;SVLEN=5669;SVTYPE=LINE1;TSD=null	GT	0
X	37574091	BI_GS_DEL1_B5_P2935_443	A	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-44,44;CIPOS=-44,44;CS=DEL_union;EAS_AF=0;END=37579372;EUR_AF=0.0039;MC=YL_CN_LWK_4167;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	37701641	DEL_pindel_53532	AATTATATTCTCATTCATACTATGTGATTGTTTAGCTATGAAACAACAACTG	A	.	PASS	AC=1178;AF=0.312053;AFR_AF=0.323;AMR_AF=0.2939;AN=3775;CS=DEL_pindel;EAS_AF=0.2919;END=37701692;EUR_AF=0.3003;NS=2504;SAS_AF=0.344;SVTYPE=DEL	GT	1
X	37813162	DUP_gs.X_CNV_X_37813162_37855992	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=37855992;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	37974440	DEL_pindel_53536	TAAGATACTTATTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGGTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1233;AF=0.326623;AFR_AF=0.35;AMR_AF=0.3244;AN=3775;CS=DEL_pindel;EAS_AF=0.2971;END=37974761;EUR_AF=0.3172;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.337;SVTYPE=DEL_ALU	GT	1
X	37986665	DEL_pindel_53537	TGATGACCTAAGAGAGCTCTGTTTTAAACATTTATTTTATAAAATGTTCTAAGCCATTAACTAAAAGGAAATGA	T	.	PASS	AC=498;AF=0.131921;AFR_AF=0.1137;AMR_AF=0.1756;AN=3775;CS=DEL_pindel;EAS_AF=0.0838;END=37986738;EUR_AF=0.1501;NS=2504;SAS_AF=0.1574;SVTYPE=DEL	GT	1
X	38097551	L1_umary_LINE1_3048	G	<INS:ME:LINE1>	.	PASS	AC=9;AF=0.00238411;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0091;MEINFO=LINE1,1,6012,+;NS=2504;SAS_AF=0.0014;SVLEN=6011;SVTYPE=LINE1;TSD=null	GT	0
X	38386513	UW_VH_2492	T	<CN0>	100	PASS	AC=884;AF=0.370331;AFR_AF=0.7089;AMR_AF=0.2252;AN=2542;CIEND=0,442;CIPOS=-421,0;CS=DEL_union;EAS_AF=0.3442;END=38387335;EUR_AF=0.1501;MC=BI_GS_DEL1_B1_P2936_279,EM_DL_DEL101169802;NS=2504;SAS_AF=0.266;SVTYPE=DEL	GT	.
X	38485618	DUP_gs.X_CNV_X_38485618_38584308	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=38584308;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	38561080	L1_umary_LINE1_3049	T	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4727,5992,-;NS=2504;SAS_AF=0;SVLEN=1265;SVTYPE=LINE1;TSD=null	GT	0
X	38584427	DUP_gs.X_CNV_X_38584427_38588518	A	<CN0>,<CN2>	.	PASS	AC=1225,1;AF=0.324503,0.0002649;AFR_AF=0.0209,0.001;AMR_AF=0.479,0;AN=3775;CS=DUP_gs;EAS_AF=0.7317,0;END=38588518;EUR_AF=0.1527,0;MC=UW_VH_2853,BI_GS_DEL1_B1_P2936_405,UW_VH_11022,YL_CN_CDX_3818;NS=2504;SAS_AF=0.3858,0;SVTYPE=CNV	GT	0
X	38590883	DUP_gs.X_CNV_X_38590883_38631587	C	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=38631587;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	38752392	BI_GS_DEL1_B5_P2936_762	T	<CN0>	100	PASS	AC=9;AF=0.00344371;AFR_AF=0.007;AMR_AF=0;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.0026;END=38755014;EUR_AF=0.0039;MC=UW_VH_17421,YL_CN_LWK_4168;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	38903559	BI_GS_DEL1_B2_P2936_525	T	<CN0>	100	PASS	AC=53;AF=0.10596;AFR_AF=0.0947;AMR_AF=0.124;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.0903;END=38904326;EUR_AF=0.1136;NS=2504;SAS_AF=0.117;SVTYPE=DEL	GT	.
X	38948202	YL_CN_STU_4578	A	<CN0>	100	PASS	AC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=38957151;EUR_AF=0.0026;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	39002551	L1_umary_LINE1_3050	G	<INS:ME:LINE1>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=LINE1,1,5998,+;NS=2504;SAS_AF=0;SVLEN=5997;SVTYPE=LINE1;TSD=null	GT	0
X	39397358	NUMT_umich_MERGED_NUMT_204	C	<INS:MT>	.	PASS	AC=64;AF=0.0169536;AFR_AF=0.0518;AMR_AF=0.0057;AN=3775;CIEND=-3,0;CIPOS=0,3;CS=NUMT_umich;EAS_AF=0.0052;END=39397360;EUR_AF=0.0026;MEND=12282;MLEN=36;MSTART=12247;NS=2504;SAS_AF=0.0042;SVTYPE=INS	GT	0
X	39642028	DUP_gs.X_CNV_X_39642028_39654111	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=39654111;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	39939333	ALU_umary_ALU_12650	G	<INS:ME:ALU>	.	PASS	AC=439;AF=0.116291;AFR_AF=0.2014;AMR_AF=0.0363;AN=3775;CS=ALU_umary;EAS_AF=0.1545;EUR_AF=0.0248;MEINFO=AluUndef,1,256,+;NS=2504;SAS_AF=0.1128;SVLEN=255;SVTYPE=ALU;TSD=AAGAAAAGGATGAGGGAAG	GT	0
X	40092270	UW_VH_5982	G	<CN0>	100	PASS	AC=49;AF=0.0333775;AFR_AF=0.014;AMR_AF=0.0095;AN=2542;CIEND=0,388;CIPOS=-448,0;CS=DEL_union;EAS_AF=0.1073;END=40094867;EUR_AF=0.0157;MC=BI_GS_DEL1_B5_P2938_68,YL_CN_CHS_4714,UW_VH_7390;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	.
X	40371270	BI_GS_DEL1_B5_P2938_312	A	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0;END=40375553;EUR_AF=0.0065;MC=YL_CN_TSI_4380;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	40459354	DEL_pindel_53562	AACTTTTTCTTCTTCCCCAACTGAAACTCTGTACTCCTTAAACACTATGAGATAACTGAAGTAGAACACCC	A	.	PASS	AC=743;AF=0.196821;AFR_AF=0.1306;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2343;END=40459424;EUR_AF=0.1945;NS=2504;SAS_AF=0.2354;SVTYPE=DEL	GT	1
X	40461270	BI_GS_DEL1_B2_P2938_226	A	<CN0>	100	PASS	AC=749;AF=0.450861;AFR_AF=0.6201;AMR_AF=0.4733;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4385;END=40461776;EUR_AF=0.3003;NS=2504;SAS_AF=0.3719;SVTYPE=DEL	GT	.
X	40465562	DEL_pindel_53563	GCTGTTTTTTAACCCTCTTCTGCAAGTTTGTTGACCTACATGGGCTAATATGGATACTAAAAATACTACATTGATCTAAGAAGAAACTAGCCTTGTGGAGTATATAGATGCTTTTCATTATACACACAAAAATCCCTGAGGGACATTTTGAGGCATGAATATAAAACATTT	G	.	PASS	AC=677;AF=0.179338;AFR_AF=0.1226;AMR_AF=0.2023;AN=3775;CS=DEL_pindel;EAS_AF=0.199;END=40465732;EUR_AF=0.1854;NS=2504;SAS_AF=0.2145;SVTYPE=DEL	GT	1
X	40495454	DEL_pindel_53568	CAGCATCTTCTTGGCAAAATCTTTTTTGGCAATCCACCTGACCAGCAGAGAATGTCTAG	C	.	PASS	AC=628;AF=0.166358;AFR_AF=0.1366;AMR_AF=0.1508;AN=3775;CS=DEL_pindel;EAS_AF=0.1597;END=40495512;EUR_AF=0.1815;NS=2504;SAS_AF=0.2103;SVTYPE=DEL	GT	1
X	40505174	DEL_pindel_53569	TTCCTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCAGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCG	T	.	PASS	AC=2547;AF=0.674702;AFR_AF=0.678;AMR_AF=0.6947;AN=3775;CS=DEL_pindel;EAS_AF=0.6976;END=40505498;EUR_AF=0.6645;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.6421;SVTYPE=DEL_ALU	GT	0
X	40652511	ALU_umary_ALU_12651	T	<INS:ME:ALU>	.	PASS	AC=133;AF=0.0352318;AFR_AF=0.1246;AMR_AF=0.0153;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=AAGGAGACTGTTTTT	GT	0
X	40682531	ALU_umary_ALU_12652	T	<INS:ME:ALU>	.	PASS	AC=48;AF=0.0127152;AFR_AF=0.0469;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,10,281,+;NS=2504;SAS_AF=0;SVLEN=271;SVTYPE=ALU;TSD=AAAGAAATCAATATACT	GT	0
X	40932142	BI_GS_DEL1_B2_P2938_434	A	<CN0>	100	PASS	AC=265;AF=0.274702;AFR_AF=0.2622;AMR_AF=0.2615;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.2827;END=40932816;EUR_AF=0.2258;MC=UW_VH_7626;NS=2504;SAS_AF=0.3454;SVTYPE=DEL	GT	.
X	41057619	DEL_pindel_53579	TTTTGAAGGAAGATCTTTTTATTAGAAAATCTGAGTTTTCTGAGATGTAATGAGATCTTAAATTCC	T	.	PASS	AC=1625;AF=0.430464;AFR_AF=0.329;AMR_AF=0.4313;AN=3775;CS=DEL_pindel;EAS_AF=0.5157;END=41057684;EUR_AF=0.4047;NS=2504;SAS_AF=0.5084;SVTYPE=DEL	GT	1
X	41101152	BI_GS_DEL1_B2_P2939_44	G	<CN0>	100	PASS	AC=140;AF=0.176424;AFR_AF=0.1406;AMR_AF=0.1679;AN=2542;CIEND=-57,57;CIPOS=-57,57;CS=DEL_union;EAS_AF=0.2042;END=41102217;EUR_AF=0.1919;NS=2504;SAS_AF=0.1866;SVTYPE=DEL	GT	.
X	41159879	BI_GS_DEL1_B3_P2939_7	G	<CN0>	100	PASS	AC=18;AF=0.0201325;AFR_AF=0.015;AMR_AF=0.021;AN=2542;CIEND=-29,29;CIPOS=-29,29;CS=DEL_union;EAS_AF=0.017;END=41162350;EUR_AF=0.0261;MC=YL_CN_ITU_4671;NS=2504;SAS_AF=0.0237;SVTYPE=DEL	GT	.
X	41214287	BI_GS_DEL1_B1_P2939_111	T	<CN0>	100	PASS	AC=36;AF=0.082649;AFR_AF=0.0728;AMR_AF=0.0916;AN=2542;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.0838;END=41215620;EUR_AF=0.0561;MC=UW_VH_7091;NS=2504;SAS_AF=0.117;SVTYPE=DEL	GT	.
X	41339020	DUP_gs.X_CNV_X_41339020_41361501	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=41361501;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	41343728	UW_VH_3171	T	<CN0>	100	PASS	AC=38;AF=0.0217218;AFR_AF=0.009;AMR_AF=0.0115;AN=2542;CIEND=0,395;CIPOS=-393,0;CS=DEL_union;EAS_AF=0.0105;END=41345820;EUR_AF=0.0679;MC=UW_VH_3194,YL_CN_CEU_5412,BI_GS_DEL1_B1_P2939_160;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	41431520	DEL_pindel_53588	AAACTATTCTTTGTGTATGAAGTGCATGTTTTACAAGCAGAACATGATGATTGATACAGTCTGGTATAAATATATATTCTTGCTATTTGACTTCTATTTGTTCCACCTGTTCTGTTATCTTTTTCTGCCTTTCTTTGTATTATTTTTTATTCTGTTTTCTCTCCTGTGTTTTCTCTCACAACTCTTCATTTTGTTGTTTTAGTGGTTGCATTAGGGTTTATAGCATCTATCTTTAACTTGTCAGTGTACCTTCAAGTGATATTATACCACTTCACATATAACCCTTATCCCCCCTACATCATATAAGAGCCTTACAAT	A	.	PASS	AC=1175;AF=0.311258;AFR_AF=0.3011;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.3115;END=41431837;EUR_AF=0.2924;NS=2504;SAS_AF=0.3496;SVTYPE=DEL	GT	1
X	41571711	DEL_pindel_53589	TTACGATTGAAACTGCCTTTGCAAAACTGTAACTAAGGAAATTATGACAGTGAAAAATATCAGACCTAACCAACTCCATCTTGCTTCTAACCTCTAAACTGTCCTTGTCCATTACTGGGCATAGGCCAAACTAGCCTTGGGAAGGAATTTAATTTATAGTTTAAATAATAGCCCTTCCCAAAAGCTAAACTGTTCTTGTAAAACGAATGAAAGGCCACCAGCCACCAAGTACGGATGAGAGGGGCTGGAATTCTAAATGTTACCAGCCATTATTCTGGAGGTCATAAGATTTGCAACTTACATCACTATCG	T	.	PASS	AC=945;AF=0.250331;AFR_AF=0.2353;AMR_AF=0.2538;AN=3775;CS=DEL_pindel;EAS_AF=0.2618;END=41572021;EUR_AF=0.2376;NS=2504;SAS_AF=0.2702;SVTYPE=DEL	GT	1
X	41646759	DEL_pindel_53591	TTTTAATAAAAAAAGTACACATTTCTTAATACTTTCCCCAAAAGCAAAAAAAAAAAAAAAAACAAACCACAAATACTTTCCCCAACTCTTCTAATAAAATC	T	.	PASS	AC=1011;AF=0.267815;AFR_AF=0.2532;AMR_AF=0.271;AN=3775;CS=DEL_pindel;EAS_AF=0.2618;END=41646859;EUR_AF=0.2676;NS=2504;SAS_AF=0.2925;SVTYPE=DEL	GT	1
X	41866985	DEL_pindel_53594	TACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGAAGAGACACAACAAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACGTTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCAAGATCAAGTGGGATTCATCCCTGGTATGCAAGGCTGGTTCAATATATGCAAATCAATAAATGTAATTGAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACACTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATCTGTGACAAACCCACAGCCAATATCATACTGAATGGGAAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAG	T	.	PASS	AC=1054;AF=0.279205;AFR_AF=0.2722;AMR_AF=0.2366;AN=3775;CS=DEL_pindel;EAS_AF=0.2853;END=41867574;EUR_AF=0.2768;NS=2504;SAS_AF=0.3162;SVTYPE=DEL	GT	1
X	41921397	DEL_pindel_53596	ATCATATATGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCC	A	.	PASS	AC=1172;AF=0.310464;AFR_AF=0.2991;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.301;END=41921475;EUR_AF=0.3029;NS=2504;SAS_AF=0.3482;SVTYPE=DEL	GT	1
X	42040893	DUP_gs.X_CNV_X_42040893_42053063	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=42053063;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	42060699	DUP_gs.X_CNV_X_42060699_42284712	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=42284712;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	42165210	ALU_umary_ALU_12653	T	<INS:ME:ALU>	.	PASS	AC=63;AF=0.0166887;AFR_AF=0.0578;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=CTGCCTTTTACTTTT	GT	0
X	42204450	UW_VH_9479	A	<CN0>	100	PASS	AC=18;AF=0.00900662;AFR_AF=0.0209;AMR_AF=0.0076;AN=2542;CIEND=0,171;CIPOS=-202,0;CS=DEL_union;EAS_AF=0.0013;END=42208025;EUR_AF=0.0078;MC=YL_CN_MSL_4016,BI_GS_DEL1_B5_P2940_170;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	42512293	BI_GS_DEL1_B1_P2940_337	C	<CN0>	100	PASS	AC=1034;AF=0.433113;AFR_AF=0.5334;AMR_AF=0.4198;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.7225;END=42513869;EUR_AF=0.1697;MC=YL_CN_KHV_4998,YL_CN_ESN_4401,UW_VH_2911,YL_CN_LWK_4170,YL_CN_ASW_4532;NS=2504;SAS_AF=0.2758;SVTYPE=DEL	GT	.
X	42601572	L1_umary_LINE1_3051	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,1665,6019,-;NS=2504;SAS_AF=0;SVLEN=4354;SVTYPE=LINE1;TSD=null	GT	0
X	42747825	DUP_gs.X_CNV_X_42747825_42760643	C	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=42760643;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	42976450	SVA_umary_SVA_836	T	<INS:ME:SVA>	.	PASS	AC=9;AF=0.00238411;AFR_AF=0;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,39,1626,+;NS=2504;SAS_AF=0.0125;SVLEN=1587;SVTYPE=SVA;TSD=null	GT	0
X	42995315	BI_GS_DEL1_B2_P2940_518	T	<CN0>	100	PASS	AC=10;AF=0.00344371;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=43000086;EUR_AF=0.0104;MC=UW_VH_11274,YL_CN_CEU_5413;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	43005613	BI_GS_DEL1_B3_P2941_1	T	<CN0>	100	PASS	AC=7;AF=0.00264901;AFR_AF=0.006;AMR_AF=0;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0;END=43016167;EUR_AF=0.0052;MC=YL_CN_GWD_5832;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	43010555	DEL_pindel_53605	AGAGCAAGACCCTGTCTCAAAAATAAATAAGAGAAAAACAAACAGAAGTATATTCACATATATATTTCATATATACATGGGAGACACCAGGGATTGAGTGGTTCTCAAAGAGGTAGCTTT	A	.	PASS	AC=1243;AF=0.329272;AFR_AF=0.3529;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.3115;END=43010674;EUR_AF=0.3042;NS=2504;SAS_AF=0.3565;SVTYPE=DEL	GT	1
X	43017706	DEL_pindel_53606	CCTTTATGTCCCCCATAGATTTTGATGATGCTTCTAGTAAAGCATTTATAATATGTTCGTAAGGTGTTTGTATGTTCTATAGTGTTAGATGTAAAAACTCCTTTCGAAAAGAAAGCATGTTTTATTTTATTCTCATCCTTCTAATGCCATGGTTCCCAAACTGTATGCCTAAGTGCCCAAAAGTGCTGCAGAGAAGTCACAAGGGGT	C	.	PASS	AC=895;AF=0.237086;AFR_AF=0.2173;AMR_AF=0.2252;AN=3775;CS=DEL_pindel;EAS_AF=0.2448;END=43017912;EUR_AF=0.235;NS=2504;SAS_AF=0.2674;SVTYPE=DEL	GT	1
X	43090191	ALU_umary_ALU_12654	A	<INS:ME:ALU>	.	PASS	AC=76;AF=0.0201325;AFR_AF=0.0718;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYg6,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=AGAAAATGGGCAA	GT	0
X	43122185	BI_GS_DEL1_B4_P2941_15	T	<CN0>	100	PASS	AC=6;AF=0.00529801;AFR_AF=0.005;AMR_AF=0.0057;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0.0039;END=43125636;EUR_AF=0.0117;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	43612929	DEL_pindel_53610	AGTACTAACAATAAATGATAGCTTTAAAGAAATAAAGGATCTCTTTGTGGTCTACTATGATTCCTACTTCAAAAATACATCTCAAATTACTTTTCTCCACTAGTAACTCCTCTCTGATTAGTCATCTCTTGCTAAAATGCCCTG	A	.	PASS	AC=1144;AF=0.303046;AFR_AF=0.2921;AMR_AF=0.3073;AN=3775;CS=DEL_pindel;EAS_AF=0.2893;END=43613072;EUR_AF=0.2977;NS=2504;SAS_AF=0.3357;SVTYPE=DEL	GT	1
X	43630876	L1_umary_LINE1_3052	T	<INS:ME:LINE1>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0052;EUR_AF=0;MEINFO=LINE1,5466,6018,-;NS=2504;SAS_AF=0;SVLEN=552;SVTYPE=LINE1;TSD=null	GT	0
X	43669193	DEL_pindel_53611	TGAAAGCTATTGGAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1268;AF=0.335894;AFR_AF=0.4167;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2893;END=43669515;EUR_AF=0.295;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.3384;SVTYPE=DEL_ALU	GT	1
X	43844741	EM_DL_DEL101171128	T	<CN0>	100	PASS	AC=138;AF=0.194437;AFR_AF=0.1725;AMR_AF=0.2023;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.1597;END=43845580;EUR_AF=0.235;NS=2504;SAS_AF=0.2131;SVTYPE=DEL	GT	.
X	43886095	DEL_pindel_53612	CCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCCACTACCACGCCTGGCTATTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACTGTGTTAGCCAGGATGGTCT	C	.	PASS	AC=1186;AF=0.314172;AFR_AF=0.3031;AMR_AF=0.3111;AN=3775;CS=DEL_pindel;EAS_AF=0.2984;END=43886212;EUR_AF=0.3146;NS=2504;SAS_AF=0.3482;SVTYPE=DEL	GT	1
X	43944831	L1_umary_LINE1_3053	T	<INS:ME:LINE1>	.	PASS	AC=142;AF=0.0376159;AFR_AF=0.1366;AMR_AF=0.0095;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5543,5765,-;NS=2504;SAS_AF=0;SVLEN=222;SVTYPE=LINE1;TSD=null	GT	0
X	43944831	UW_VH_12698	T	<CN0>	100	PASS	AC=120;AF=0.0553642;AFR_AF=0.1864;AMR_AF=0.0153;AN=2542;CIEND=0,187;CIPOS=-176,0;CS=DEL_union;EAS_AF=0.0039;END=43947288;EUR_AF=0.0104;MC=YL_CN_YRI_5540,BI_GS_DEL1_B4_P2941_129;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	44058433	DUP_gs.X_CNV_X_44058433_44062832	T	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=44062832;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	44059561	BI_GS_DEL1_B2_P2942_31	C	<CN0>	100	PASS	AC=9;AF=0.00397351;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=-25,25;CIPOS=-25,25;CS=DEL_union;EAS_AF=0;END=44062635;EUR_AF=0.0104;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	44064123	ALU_umary_ALU_12655	G	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,11,281,+;NS=2504;SAS_AF=0;SVLEN=270;SVTYPE=ALU;TSD=null	GT	0
X	44331448	DEL_pindel_53617	GTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATAACTTGAACCCAGGAGGCAGAGGTTGCAGCGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGAGACAGAGCGAGACTCAGTTTCAAAAATTAAT	G	.	PASS	AC=1002;AF=0.26543;AFR_AF=0.2493;AMR_AF=0.2767;AN=3775;CS=DEL_pindel;EAS_AF=0.2539;END=44331580;EUR_AF=0.2598;NS=2504;SAS_AF=0.2981;SVTYPE=DEL	GT	1
X	44336413	UW_VH_6035	G	<CN0>	100	PASS	AC=11;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,207;CIPOS=-252,0;CS=DEL_union;EAS_AF=0.0026;END=44341767;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	44365819	DUP_gs.X_CNV_X_44365819_44384141	A	<CN0>,<CN2>	.	PASS	AC=3,2;AF=0.0007947,0.0005298;AFR_AF=0.003,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=44384141;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	44379815	BI_GS_DEL1_B3_P2942_12	T	<CN0>	100	PASS	AC=46;AF=0.0535099;AFR_AF=0.0359;AMR_AF=0.0477;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0353;END=44381379;EUR_AF=0.0692;MC=UW_VH_7697;NS=2504;SAS_AF=0.085;SVTYPE=DEL	GT	.
X	44388485	DUP_gs.X_CNV_X_44388485_44419630	A	<CN0>,<CN2>	.	PASS	AC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0.0013;END=44419630;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	44392587	YL_CN_CHB_4645	T	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=44427391;EUR_AF=0.0065;MC=BI_GS_DEL1_B4_P2942_53;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	44427162	BI_GS_DEL1_B3_P2942_15	C	<CN0>	100	PASS	AC=150;AF=0.218013;AFR_AF=0.2034;AMR_AF=0.2195;AN=2542;CIEND=-54,55;CIPOS=-54,55;CS=DEL_union;EAS_AF=0.2369;END=44428047;EUR_AF=0.2232;NS=2504;SAS_AF=0.2117;SVTYPE=DEL	GT	.
X	44429385	DUP_gs.X_CNV_X_44429385_44446520	C	<CN0>,<CN2>	.	PASS	AC=0,5;AF=0,0.0013245;AFR_AF=0,0.003;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=44446520;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	44435597	BI_GS_DEL1_B3_P2942_16	C	<CN0>	100	PASS	AC=17;AF=0.0124503;AFR_AF=0.0209;AMR_AF=0.0076;AN=2542;CIEND=-40,40;CIPOS=-40,40;CS=DEL_union;EAS_AF=0.0105;END=44437774;EUR_AF=0.0131;MC=YL_CN_GWD_5835;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	44475667	BI_GS_DEL1_B4_P2942_58	C	<CN0>	100	PASS	AC=6;AF=0.00900662;AFR_AF=0.005;AMR_AF=0.0115;AN=2542;CIEND=-68,68;CIPOS=-68,68;CS=DEL_union;EAS_AF=0.0131;END=44479908;EUR_AF=0.0117;MC=YL_CN_CHB_4646;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	44479867	YL_CN_ASW_4537	C	<CN0>	100	PASS	AC=4;AF=0.0108609;AFR_AF=0.013;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0157;END=44486656;EUR_AF=0.0104;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	.
X	44497023	DUP_gs.X_CNV_X_44497023_44511860	A	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=44511860;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	44519535	BI_GS_DEL1_B1_P2942_265	G	<CN0>	100	PASS	AC=12;AF=0.00529801;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-38,38;CIPOS=-38,38;CS=DEL_union;EAS_AF=0.0209;END=44526696;EUR_AF=0;MC=UW_VH_6469,YL_CN_CHB_4647;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	44522080	DUP_gs.X_CNV_X_44522080_44526656	A	<CN0>,<CN2>	.	PASS	AC=16,3;AF=0.00423841,0.0007947;AFR_AF=0,0.001;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0.0209,0.0013;END=44526656;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	44561503	ALU_umary_ALU_12656	T	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0039;MEINFO=AluUndef,23,281,-;NS=2504;SAS_AF=0;SVLEN=258;SVTYPE=ALU;TSD=TCCACTTTTT	GT	0
X	44564146	DUP_gs.X_CNV_X_44564146_44574565	G	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=44574565;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	44578565	SVA_umary_SVA_837	C	<INS:ME:SVA>	.	PASS	AC=174;AF=0.0460927;AFR_AF=0.0808;AMR_AF=0.0191;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0.0405;MEINFO=SVA,317,1627,+;NS=2504;SAS_AF=0.0724;SVLEN=1310;SVTYPE=SVA;TSD=AACATCCATCACC	GT	0
X	44611708	UW_VH_13837	C	<CN0>	100	PASS	AC=53;AF=0.085298;AFR_AF=0.0887;AMR_AF=0.0859;AN=2542;CIEND=0,195;CIPOS=-320,0;CS=DEL_union;EAS_AF=0.1139;END=44613745;EUR_AF=0.0679;NS=2504;SAS_AF=0.0682;SVTYPE=DEL	GT	.
X	44642003	DUP_gs.X_CNV_X_44642003_44647911	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=44647911;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	44715417	BI_GS_DEL1_B5_P2942_462	A	<CN0>	100	PASS	AC=110;AF=0.14596;AFR_AF=0.1456;AMR_AF=0.1126;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.1675;END=44718330;EUR_AF=0.1149;MC=YL_CN_PJL_5027,YL_CN_ITU_4675;NS=2504;SAS_AF=0.1811;SVTYPE=DEL	GT	.
X	44724299	BI_GS_DEL1_B2_P2942_233	G	<CN0>	100	PASS	AC=18;AF=0.0656954;AFR_AF=0.0718;AMR_AF=0.0477;AN=2542;CIEND=-58,58;CIPOS=-58,58;CS=DEL_union;EAS_AF=0.0746;END=44726062;EUR_AF=0.0431;NS=2504;SAS_AF=0.085;SVTYPE=DEL	GT	.
X	44908140	ALU_umary_ALU_12657	T	<INS:ME:ALU>	.	PASS	AC=109;AF=0.0288742;AFR_AF=0.0987;AMR_AF=0.0191;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CTCAAGTTACTTTTTT	GT	0
X	45016247	BI_GS_DEL1_B5_P2943_15	C	<CN0>	100	PASS	AC=53;AF=0.11894;AFR_AF=0.1087;AMR_AF=0.1183;AN=2542;CIEND=-8,9;CIPOS=-8,9;CS=DEL_union;EAS_AF=0.1086;END=45017614;EUR_AF=0.154;NS=2504;SAS_AF=0.1072;SVTYPE=DEL	GT	.
X	45185289	UW_VH_14974	G	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,124;CIPOS=-112,0;CS=DEL_union;EAS_AF=0;END=45205582;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	45208735	BI_GS_DEL1_B2_P2943_117	G	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-43,44;CIPOS=-43,44;CS=DEL_union;EAS_AF=0.0013;END=45214687;EUR_AF=0.0065;MC=YL_CN_CDX_3826;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	45289029	BI_GS_DEL1_B5_P2943_246	T	<CN0>	100	PASS	AC=5;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0.0013;END=45292881;EUR_AF=0.0052;MC=UW_VH_22079;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	45318884	ALU_umary_ALU_12658	T	<INS:ME:ALU>	.	PASS	AC=278;AF=0.0736424;AFR_AF=0.0339;AMR_AF=0.0725;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0.1697;MEINFO=AluYa5a1,1,281,-;NS=2504;SAS_AF=0.1031;SVLEN=280;SVTYPE=ALU;TSD=AATGTTGGATTTT	GT	0
X	45423273	BI_GS_DEL1_B4_P2943_75	G	<CN0>	100	PASS	AC=119;AF=0.163709;AFR_AF=0.1555;AMR_AF=0.1603;AN=2542;CIEND=-38,38;CIPOS=-38,38;CS=DEL_union;EAS_AF=0.1361;END=45423945;EUR_AF=0.1945;NS=2504;SAS_AF=0.1741;SVTYPE=DEL	GT	.
X	45789392	L1_umary_LINE1_3054	T	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=LINE1,3561,5973,-;NS=2504;SAS_AF=0;SVLEN=2412;SVTYPE=LINE1;TSD=null	GT	0
X	45817059	ALU_umary_ALU_12659	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,10,267,-;NS=2504;SAS_AF=0;SVLEN=257;SVTYPE=ALU;TSD=null	GT	0
X	45856436	DEL_pindel_53627	GCTCATTATGAATATTTTTGAGTACCCAGCATAATACGAAGGAAAAAACCCATCATCTGTAATTCCACAACTCCAAAATAATCATTGTTAGCAGATCACCAAATTGGGATCCTACTGTAAATCTTACTTTTTAATTGAATTGTTATTGAGATATTAATTGATTCATATGCAGTTGTAAGAAAAAATACAACAATCGTTGTGTACTTTATTCAGTCTCATCCAATGGTAATATTTTGCAAAACAAAGCATAATAACACAAGCAGGATATTGACGTTGATACAATGTGGTAAACTGATTCAATTTTCTCCACTTCTGGTACCCATTTGTGTGTGTGCGTGTGTGTTTCTATGTATTAGAAACATGAATTAATATTAGTACTACATTCTATACAATTATATCATCTATGTAGTTTCATGTATCCACCACCACTGTCAAGATACAGAACAATCCCAACACTATAAGTATCTCTCATGTTATCCTTTTATAACCACACTCACTTTCCTCCTCTCCTTCAATATCTCCAGCCTCTGGTAATTACTAATCTGTTCTTCATTTCTAAAATGTTGTCATTTCAAAAAGGTATATAAATGGATTTATATAGTTTGTAACCTTTTGAGATTAACCTTTTTTACTCAGCATAATTTCCTGGAGATTCATTAGTGTAGTTATATGTATCAATAGTTCTTTACTTTTTATTGCTGAGTAGTAGTCCATGGTATGGATATACCATGGTTTGTTTAACCATTCACCTGTTGAAAGACATATGGGCTGGTTCCAGTTTTGGGCTATTATGAATAAAGCTGCTATGAACATTTGTATACAGGTTTTTGTGTGAATATAAGTTGTCATTTATTTA	G	.	PASS	AC=104;AF=0.0275497;AFR_AF=0.005;AMR_AF=0.0324;AN=3775;CS=DEL_pindel;EAS_AF=0.0733;END=45857291;EUR_AF=0.0039;NS=2504;SAS_AF=0.032;SVTYPE=DEL	GT	0
X	46347170	NUMT_umich_MERGED_NUMT_205	C	<INS:MT>	.	PASS	AC=8;AF=0.00211921;AFR_AF=0;AMR_AF=0.0019;AN=3775;CIEND=-4,0;CIPOS=0,4;CS=NUMT_umich;EAS_AF=0.0065;END=46347173;EUR_AF=0.0013;MEND=1184;MLEN=202;MSTART=983;NS=2504;SAS_AF=0.0014;SVTYPE=INS	GT	0
X	46355358	UW_VH_18507	C	<CN0>	100	PASS	AC=23;AF=0.0468874;AFR_AF=0.0379;AMR_AF=0.0649;AN=2542;CIEND=0,118;CIPOS=-223,0;CS=DEL_union;EAS_AF=0.0497;END=46356852;EUR_AF=0.0483;MC=BI_GS_DEL1_B4_P2944_57;NS=2504;SAS_AF=0.0418;SVTYPE=DEL	GT	.
X	46414700	L1_umary_LINE1_3055	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,4522,5998,+;NS=2504;SAS_AF=0;SVLEN=1476;SVTYPE=LINE1;TSD=null	GT	0
X	46661728	DEL_pindel_53633	TTCCTAGCTTGGTACTCCACTGAGTCCATTTTTTTCCTACTGATTCAATTATTATGTATCAATTTCCATTCCTGGGTTTCCTC	T	.	PASS	AC=113;AF=0.0299338;AFR_AF=0.0189;AMR_AF=0.0649;AN=3775;CS=DEL_pindel;EAS_AF=0.0445;END=46661810;EUR_AF=0.0131;NS=2504;SAS_AF=0.0223;SVTYPE=DEL	GT	1
X	46707327	DEL_pindel_53636	GTATATACATATATATGGACTCATATATGTGTATATACATATATATATATA	G	.	PASS	AC=975;AF=0.258278;AFR_AF=0.2702;AMR_AF=0.2385;AN=3775;CS=DEL_pindel;EAS_AF=0.2421;END=46707377;EUR_AF=0.235;NS=2504;SAS_AF=0.2981;SVTYPE=DEL	GT	1
X	46794577	UW_VH_12963	C	<CN0>	100	PASS	AC=95;AF=0.112318;AFR_AF=0.1356;AMR_AF=0.1126;AN=2542;CIEND=0,340;CIPOS=-420,0;CS=DEL_union;EAS_AF=0.1034;END=46795620;EUR_AF=0.0901;MC=BI_GS_DEL1_B3_P2944_17,EM_DL_DEL101172042;NS=2504;SAS_AF=0.1128;SVTYPE=DEL	GT	.
X	47093162	DEL_pindel_53641	CTGAGGGGCGTGCTCTGAGGCCGAGGGACGACAGTGGAGGGGAGGTGGTGCCTA	C	.	PASS	AC=2054;AF=0.544106;AFR_AF=0.3679;AMR_AF=0.5821;AN=3775;CS=DEL_pindel;EAS_AF=0.6584;END=47093215;EUR_AF=0.671;NS=2504;SAS_AF=0.5056;SVTYPE=DEL	GT	1
X	47117440	YL_CN_TSI_4382	A	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=47154304;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	47183859	SVA_umary_SVA_838	T	<INS:ME:SVA>	.	PASS	AC=258;AF=0.0683444;AFR_AF=0.0917;AMR_AF=0.0344;AN=3775;CS=SVA_umary;EAS_AF=0.0052;EUR_AF=0.0757;MEINFO=SVA,1487,1627,-;NS=2504;SAS_AF=0.1198;SVLEN=140;SVTYPE=SVA;TSD=GACAGGGACAACTCTT	GT	0
X	47218338	DUP_gs.X_CNV_X_47218338_47224549	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=47224549;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	47329162	UW_VH_5014	G	<CN0>	100	PASS	AC=12;AF=0.00370861;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=0,282;CIPOS=-320,0;CS=DEL_union;EAS_AF=0;END=47335634;EUR_AF=0.0117;MC=BI_GS_DEL1_B1_P2945_138,YL_CN_FIN_4294;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	47353120	UW_VH_24659	T	<CN0>	100	PASS	AC=205;AF=0.215894;AFR_AF=0.2223;AMR_AF=0.2271;AN=2542;CIEND=0,149;CIPOS=-181,0;CS=DEL_union;EAS_AF=0.1675;END=47353759;EUR_AF=0.1919;MC=BI_GS_DEL1_B5_P2945_185;NS=2504;SAS_AF=0.2758;SVTYPE=DEL	GT	.
X	47366180	BI_GS_DEL1_B5_P2945_200	A	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0;END=47381717;EUR_AF=0.0065;MC=YL_CN_PJL_5029;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	47401622	YL_CN_GWD_5837	C	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=47410370;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	47708097	ALU_umary_ALU_12660	T	<INS:ME:ALU>	.	PASS	AC=53;AF=0.0140397;AFR_AF=0;AMR_AF=0.021;AN=3775;CS=ALU_umary;EAS_AF=0.0445;EUR_AF=0;MEINFO=AluYg6a2,12,281,-;NS=2504;SAS_AF=0.0111;SVLEN=269;SVTYPE=ALU;TSD=CAAAATCCAAAACTTTTT	GT	0
X	47771488	ALU_umary_ALU_12661	T	<INS:ME:ALU>	.	PASS	AC=168;AF=0.0445033;AFR_AF=0.1565;AMR_AF=0.0191;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,3,280,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null	GT	0
X	47829457	BI_GS_DEL1_B1_P2945_437	T	<CN0>	100	PASS	AC=10;AF=0.0323179;AFR_AF=0.0269;AMR_AF=0.0382;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0223;END=47834256;EUR_AF=0.0261;MC=UW_VH_4323,YL_CN_CLM_3837;NS=2504;SAS_AF=0.0529;SVTYPE=DEL	GT	.
X	47862951	DUP_gs.X_CNV_X_47862951_48003688	G	<CN0>,<CN2>	.	PASS	AC=25,57;AF=0.00662252,0.0150993;AFR_AF=0.015,0.0379;AMR_AF=0.0019,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0.0065,0.0105;END=48003688;EUR_AF=0.0052,0.0065;NS=2504;SAS_AF=0,0.0056;SVTYPE=CNV	GT	0
X	47999721	DUP_gs.X_CNV_X_47999721_48056440	C	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=48056440;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	48047631	DUP_gs.X_CNV_X_48047631_48086232	A	<CN0>,<CN2>	.	PASS	AC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=48086232;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	48061368	DEL_pindel_53651	CCAAGGCTATAAACAATTAATCTGACATAGGATGTAAAAATTAAAGTATCATGTAAGTCAAAAGACACCATAAACAACTATTTAAAAAGGCAAATTTTAGGCCAGGCGCGGGGGCTCACGCCTGTAATCCCAGCACTTTAGGGGGCTAAGGAGGGCAGATCACAAAGTCAGGAGATCAACACCATCCT	C	.	PASS	AC=962;AF=0.254834;AFR_AF=0.2453;AMR_AF=0.2653;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=48061555;EUR_AF=0.2389;NS=2504;SAS_AF=0.2813;SVTYPE=DEL	GT	1
X	48116282	DUP_gs.X_CNV_X_48116282_48165949	T	<CN0>,<CN2>	.	PASS	AC=0,4;AF=0,0.0010596;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=48165949;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	48125593	DEL_pindel_53652	TGTGAAAAACTGGATAAAGAAGGCCCATGGGCACTTGGGAGGGAGGAGGCATCTCCTTTTTTTGAGAAAACAGAGCCTAACACTCTTCAACGTACCCAACCCTCATCTTCCAACTCTTCTCCATCATAGGACCCAAAAGGGGGAAACATGCCTGGA	T	.	PASS	AC=134;AF=0.0354967;AFR_AF=0.0169;AMR_AF=0.0496;AN=3775;CS=DEL_pindel;EAS_AF=0.0406;END=48125748;EUR_AF=0.0444;NS=2504;SAS_AF=0.0362;SVTYPE=DEL	GT	0
X	48127600	DEL_pindel_53653	GGGTCTCACCACCCAAGGGCCTGGGGGCTGGGGTGGGGACGATGATTTGGGAATGGGACAGTTCTTTCTCACAGGTACCAATGCACGGTGCAGAGGGGAAACAGTTGTGGGGAAGGGAAGGGCAGAGGGGAGTCTATTTTAGCACAAAGCATTGTGTGTGAAT	G	.	PASS	AC=1940;AF=0.513907;AFR_AF=0.4855;AMR_AF=0.5305;AN=3775;CS=DEL_pindel;EAS_AF=0.5039;END=48127762;EUR_AF=0.5653;NS=2504;SAS_AF=0.4972;SVTYPE=DEL	GT	1
X	48169696	DUP_gs.X_CNV_X_48169696_48215049	C	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=48215049;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	48449189	DEL_pindel_53657	TCAAGCAAAGCGAGGGCGGGATGACAAAGTACTTGTTAGGAATCCACACTAGATGAGCTCACAAAAAGTAACTTGACAGTTGGTGTTAGTGTTGTGGTTAAGAACAGGGATTCGGAGCCAAGTGGCCTA	T	.	PASS	AC=586;AF=0.155232;AFR_AF=0.0967;AMR_AF=0.187;AN=3775;CS=DEL_pindel;EAS_AF=0.1597;END=48449317;EUR_AF=0.1645;NS=2504;SAS_AF=0.1992;SVTYPE=DEL	GT	1
X	48500496	BI_GS_DEL1_B5_P2946_260	G	<CN0>	100	PASS	AC=343;AF=0.177219;AFR_AF=0.4586;AMR_AF=0.1145;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0576;END=48502929;EUR_AF=0.0418;MC=UW_VH_17607,UW_VH_7000,YL_CN_LWK_4174;NS=2504;SAS_AF=0.1017;SVTYPE=DEL	GT	.
X	48623509	BI_GS_DEL1_B5_P2946_338	A	<CN0>	100	PASS	AC=3;AF=0.00211921;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.0026;END=48626754;EUR_AF=0;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	48724413	YL_CN_PJL_5033	C	<CN0>	100	PASS	AC=4;AF=0.0013245;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=48743697;EUR_AF=0.0026;MC=BI_GS_DEL1_B2_P2946_264;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	48945168	BI_GS_DEL1_B4_P2946_95	G	<CN0>	100	PASS	AC=7;AF=0.0119205;AFR_AF=0.013;AMR_AF=0.0057;AN=2542;CIEND=-54,55;CIPOS=-54,55;CS=DEL_union;EAS_AF=0.0196;END=48948889;EUR_AF=0.0052;MC=YL_CN_STU_4586;NS=2504;SAS_AF=0.0139;SVTYPE=DEL	GT	.
X	48952964	DUP_gs.X_CNV_X_48952964_48965729	T	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=48965729;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	48984944	BI_GS_DEL1_B3_P2946_16	A	<CN0>	100	PASS	AC=7;AF=0.0180133;AFR_AF=0.014;AMR_AF=0.0191;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0.017;END=48986890;EUR_AF=0.0183;MC=YL_CN_STU_4587;NS=2504;SAS_AF=0.0237;SVTYPE=DEL	GT	.
X	49161314	DUP_gs.X_CNV_X_49161314_49177223	C	<CN0>,<CN2>	.	PASS	AC=1,3;AF=0.0002649,0.0007947;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=49177223;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0042;SVTYPE=CNV	GT	0
X	49368756	DUP_gs.X_CNV_X_49368756_49377573	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=49377573;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	49381978	L1_umary_LINE1_3056	G	<INS:ME:LINE1>	.	PASS	AC=80;AF=0.021192;AFR_AF=0.0738;AMR_AF=0.0115;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2759,5093,+;NS=2504;SAS_AF=0;SVLEN=2334;SVTYPE=LINE1;TSD=null	GT	0
X	49382036	BI_GS_DEL1_B3_P2947_2	G	<CN0>	100	PASS	AC=66;AF=0.0275497;AFR_AF=0.0857;AMR_AF=0.0134;AN=2542;CIEND=-53,54;CIPOS=-53,54;CS=DEL_union;EAS_AF=0.0026;END=49385684;EUR_AF=0.0104;MC=YL_CN_ACB_5057,UW_VH_7759;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	49384996	UW_VH_12718	T	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=0,230;CIPOS=-229,0;CS=DEL_union;EAS_AF=0.0026;END=49393308;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	49405260	DEL_pindel_53667	CCTCAGAAAATCAGAGATCTGCTATCTGTCAGTATAGGTATTTTGCATTTTCTATAATTTATATAAATGGAATCATATAGTATGCATTCTTTTTTGTCTTTTTTTACTCATATTACTGTAAGATTCATCCAAATTGTTGCGTGTTTCAATAGGTCATTTATTTTCATTGCTGAGTAGTATTTTATTGTGTAGATATAACACAATTTAT	C	.	PASS	AC=105;AF=0.0278146;AFR_AF=0.011;AMR_AF=0.063;AN=3775;CS=DEL_pindel;EAS_AF=0.0223;END=49405467;EUR_AF=0.0183;NS=2504;SAS_AF=0.0418;SVTYPE=DEL	GT	0
X	49411799	ALU_umary_ALU_12662	T	<INS:ME:ALU>	.	PASS	AC=48;AF=0.0127152;AFR_AF=0.0459;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,6,281,-;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=CAGGAAAAGCTCTTT	GT	0
X	49628078	DEL_pindel_53674	CATTACATCAGTGTGTGTGAGTCCCAGGTAAGCCAGGTCTTTTCACCTCCTAGCTCAACACCCGAAGTATCCCATGATATTTGGCAGAATCCAAAAAGGAGGACAGAGCTAGTGAGGGCCAGCTGGGCCTGGTAGGGCATGCTTGTAGCCCTAGCTACTTGGGAGGGTGAGGCGAGAGGATCCTTGAGCCCAGGACCATAGCTGCAGTGAGCCATGATCATGCCACTGCACTCCAGCCTGGGCGACAGAACAGGATACTATTTCTAAAAAAAAATTTAAAAGTTAGTGAGGCCTAGGCCCCATCCCCTGCTTTTGTATTTTTATATAACTGGCTCAAAAGTACTCTCCTAGTCATATTTATTGTTCACATAGACATTATTGCAATGGGTATGACATTATTTCAATGGGTATAACATTATTTAATATGAGTCTCTAATCACTTATAATCCACTTTTTCAATTAATCTAAGTCACTTTAAATGTGCGACAATTACTAAAACTACTACTCCCAGTACTAGTACTACCACTACTACTATTAATAGGACCTTACAAATATCAGTTTTTGTGTTATCAGAGAAATATGAGGGTATTGTTAAATTTGAATCGGATGAATTACCTTTTGGTGTAATTGGTTCTAATATTGGTGATGCACATTTTCAAGAATTCAGGTAACATTAAACACTCAGTGAAATCACTTAGATTTTTACACTGTATTGATACATAGTTTA	C	.	PASS	AC=360;AF=0.0953642;AFR_AF=0.0499;AMR_AF=0.1088;AN=3775;CS=DEL_pindel;EAS_AF=0.1414;END=49628804;EUR_AF=0.0966;NS=2504;SAS_AF=0.0989;SVTYPE=DEL	GT	0
X	49945252	UW_VH_16882	G	<CN0>	100	PASS	AC=41;AF=0.0884768;AFR_AF=0.0937;AMR_AF=0.0973;AN=2542;CIEND=0,166;CIPOS=-219,0;CS=DEL_union;EAS_AF=0.0851;END=49946429;EUR_AF=0.0679;MC=BI_GS_DEL1_B5_P2947_570;NS=2504;SAS_AF=0.1003;SVTYPE=DEL	GT	.
X	50387143	BI_GS_DEL1_B2_P2948_206	G	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=50396588;EUR_AF=0.0065;MC=YL_CN_ACB_5058;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	50640899	ALU_umary_ALU_12663	T	<INS:ME:ALU>	.	PASS	AC=26;AF=0.00688742;AFR_AF=0.0209;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYf1,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	51131680	BI_GS_DEL1_B2_P2949_59	A	<CN0>	100	PASS	AC=15;AF=0.00529801;AFR_AF=0.012;AMR_AF=0.0057;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=51136610;EUR_AF=0.0065;MC=YL_CN_LWK_4179;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	51259150	DUP_gs.X_CNV_X_51259150_51276086	A	<CN0>,<CN2>	.	PASS	AC=0,5;AF=0,0.0013245;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=51276086;EUR_AF=0,0;NS=2504;SAS_AF=0,0.007;SVTYPE=DUP	GT	0
X	51326952	DEL_pindel_53684	TTGTGTTGAATCCATAGACCAATTTGGGGAAAATTGCCAAACAGCATCGTGTCTTGGAATCCATGAATATAGAAAGTCTTTCTAATAATTTAGATCTTCTTTAATTCATTGCAATG	T	.	PASS	AC=1208;AF=0.32;AFR_AF=0.317;AMR_AF=0.3168;AN=3775;CS=DEL_pindel;EAS_AF=0.3076;END=51327067;EUR_AF=0.3081;NS=2504;SAS_AF=0.3524;SVTYPE=DEL	GT	0
X	51373371	DEL_pindel_53685	CATATATATATATATATTTTATATATATATAATATATATATATTATATATATATTTTATATATATATAATATATATATATTATATATATATAATATATATATATATTTTATATATATATAATATATATATATTATATATATATATATATAT	C	.	PASS	AC=860;AF=0.227815;AFR_AF=0.2712;AMR_AF=0.1889;AN=3775;CS=DEL_pindel;EAS_AF=0.1584;END=51373521;EUR_AF=0.2533;NS=2504;SAS_AF=0.2423;SVTYPE=DEL	GT	0
X	51376938	DEL_pindel_53686	AGCTGGGATTACAGGCATGCGCCACCACGCCTGGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGGTGATCTGCCCTCCTCGGCCTCCCAAAGT	A	.	PASS	AC=1022;AF=0.270728;AFR_AF=0.2562;AMR_AF=0.2824;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=51377072;EUR_AF=0.2689;NS=2504;SAS_AF=0.305;SVTYPE=DEL	GT	1
X	51551811	UW_VH_21205	A	<CN0>	100	PASS	AC=63;AF=0.113907;AFR_AF=0.1376;AMR_AF=0.0935;AN=2542;CIEND=0,193;CIPOS=-215,0;CS=DEL_union;EAS_AF=0.1047;END=51553424;EUR_AF=0.1084;MC=BI_GS_DEL1_B4_P2949_68;NS=2504;SAS_AF=0.1114;SVTYPE=DEL	GT	.
X	51693785	ALU_umary_ALU_12664	G	<INS:ME:ALU>	.	PASS	AC=242;AF=0.064106;AFR_AF=0.0439;AMR_AF=0.042;AN=3775;CS=ALU_umary;EAS_AF=0.0602;EUR_AF=0.0966;MEINFO=AluUndef,3,281,+;NS=2504;SAS_AF=0.078;SVLEN=278;SVTYPE=ALU;TSD=AAAAGCTGTG	GT	0
X	51762707	DUP_gs.X_CNV_X_51762707_51782852	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=51782852;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	51784227	DUP_gs.X_CNV_X_51784227_51853863	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=51853863;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	51856584	YL_CN_IBS_4071	A	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=51864982;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	52651001	DUP_gs.X_CNV_X_52651001_52693039	G	<CN0>,<CN2>	.	PASS	AC=0,33;AF=0,0.00874172;AFR_AF=0,0.0259;AMR_AF=0,0.0095;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=52693039;EUR_AF=0,0;MC=DUP_gs.X_CNV_X_52659653_52699562;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	52693577	DUP_gs.X_CNV_X_52693577_52874118	G	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=52874118;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	52887623	UW_VH_5424	A	<CN0>	100	PASS	AC=12;AF=0.0283444;AFR_AF=0.0289;AMR_AF=0.0382;AN=2542;CIEND=0,102;CIPOS=-113,0;CS=DEL_union;EAS_AF=0.0236;END=52890080;EUR_AF=0.0261;NS=2504;SAS_AF=0.0279;SVTYPE=DEL	GT	.
X	52961285	DEL_pindel_53697	AACTAAATTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	.	PASS	AC=1309;AF=0.346755;AFR_AF=0.339;AMR_AF=0.355;AN=3775;CS=DEL_pindel;EAS_AF=0.2906;END=52961607;EUR_AF=0.3812;MEINFO=AluYb3a1,1,276,-;NS=2504;SAS_AF=0.3747;SVTYPE=DEL_ALU	GT	1
X	53135119	UW_VH_10913	A	<CN0>	100	PASS	AC=86;AF=0.0625166;AFR_AF=0.1376;AMR_AF=0.0401;AN=2542;CIEND=0,331;CIPOS=-325,0;CS=DEL_union;EAS_AF=0.0366;END=53137163;EUR_AF=0.03;MC=BI_GS_DEL1_B3_P2951_3,YL_CN_LWK_4184,YL_CN_YRI_5550;NS=2504;SAS_AF=0.0362;SVTYPE=DEL	GT	.
X	53137316	BI_GS_DEL1_B3_P2951_4	C	<CN0>	100	PASS	AC=12;AF=0.0148344;AFR_AF=0.0169;AMR_AF=0.0076;AN=2542;CIEND=-37,37;CIPOS=-37,37;CS=DEL_union;EAS_AF=0.0262;END=53140138;EUR_AF=0.0104;MC=YL_CN_ESN_4409;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	53319071	BI_GS_DEL1_B3_P2951_9	T	<CN0>	100	PASS	AC=12;AF=0.0317881;AFR_AF=0.0309;AMR_AF=0.042;AN=2542;CIEND=-15,15;CIPOS=-15,15;CS=DEL_union;EAS_AF=0.0183;END=53320350;EUR_AF=0.0418;NS=2504;SAS_AF=0.0292;SVTYPE=DEL	GT	.
X	53394360	ALU_umary_ALU_12665	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	53478093	YL_CN_MXL_3736	C	<CN0>	100	PASS	AC=41;AF=0.0164238;AFR_AF=0.0508;AMR_AF=0.0076;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=53491686;EUR_AF=0.0078;MC=BI_GS_DEL1_B3_P2951_13,UW_VH_16114;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	53481193	BI_GS_DEL1_B5_P2951_339	T	<CN0>	100	PASS	AC=154;AF=0.177219;AFR_AF=0.2313;AMR_AF=0.1775;AN=2542;CIEND=-23,24;CIPOS=-23,24;CS=DEL_union;EAS_AF=0.1466;END=53482847;EUR_AF=0.1201;NS=2504;SAS_AF=0.195;SVTYPE=DEL	GT	.
X	53496416	BI_GS_DEL1_B4_P2951_78	T	<CN0>	100	PASS	AC=45;AF=0.0177483;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0052;END=53499888;EUR_AF=0.0065;MC=YL_CN_STU_4589;NS=2504;SAS_AF=0.0766;SVTYPE=DEL	GT	.
X	53513441	BI_GS_DEL1_B2_P2951_238	G	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-28,28;CIPOS=-28,28;CS=DEL_union;EAS_AF=0;END=53520776;EUR_AF=0.0091;MC=YL_CN_IBS_4072;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	53772344	BI_GS_DEL1_B4_P2951_118	T	<CN0>	100	PASS	AC=32;AF=0.0116556;AFR_AF=0.0379;AMR_AF=0.0057;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0;END=53778301;EUR_AF=0.0039;MC=UW_VH_8820,YL_CN_YRI_5552,YL_CN_ASW_4543;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	53781934	BI_GS_DEL1_B5_P2951_575	A	<CN0>	100	PASS	AC=10;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-44,44;CIPOS=-44,44;CS=DEL_union;EAS_AF=0.0079;END=53808203;EUR_AF=0.0052;MC=YL_CN_JPT_4704;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	53792163	DEL_pindel_53708	ACATCAGGAAGAATGGGGAAACCATCCCCTCAAGCATTTATCCTTTGAGTTACAAG	A	.	PASS	AC=939;AF=0.248742;AFR_AF=0.2522;AMR_AF=0.2252;AN=3775;CS=DEL_pindel;EAS_AF=0.2487;END=53792218;EUR_AF=0.2507;NS=2504;SAS_AF=0.2591;SVTYPE=DEL	GT	0
X	53800902	DEL_pindel_53709	CAGGCGTGGTGGCAGGCACCTGTAATCTCAGCTACTAGGGAGGCTGAGGCAGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCTGAGATCCCTCCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTAAAAAAAAAAAAAAGATTCAAGAGACTTGAACATGTTTGAAGGCCACGTCAGAGAAAGGAAAAGGCTGAAAATACAGAAGGGAGGGAGAGAGGGAACTCAGAGATCAAGTTTCCTGAGAAAGTAGAAGGGAATGGGGCACAGAATTCAGGTGGAAGGATTAGTCAACAAGAAAAGGGGCACCTCTTCCCCTGGAATAGGAGGGAAAGAGCAAAGAGTAGTCAGATTGGGATGCTCAGGAGTTTGTATGTACTCCATGTCAAGGAGTAGA	C	.	PASS	AC=790;AF=0.209272;AFR_AF=0.2084;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2107;END=53801312;EUR_AF=0.1893;NS=2504;SAS_AF=0.2228;SVTYPE=DEL	GT	0
X	53819547	BI_GS_DEL1_B3_P2951_27	G	<CN0>	100	PASS	AC=149;AF=0.189139;AFR_AF=0.1775;AMR_AF=0.1794;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.195;END=53820294;EUR_AF=0.1684;NS=2504;SAS_AF=0.2284;SVTYPE=DEL	GT	.
X	53820721	DUP_gs.X_CNV_X_53820721_53862221	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=53862221;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	53865806	YL_CN_GBR_4516	T	<CN0>	100	PASS	AC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=53872862;EUR_AF=0.0039;MC=BI_GS_DEL1_B1_P2951_518;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	53996020	UW_VH_20381	A	<CN0>	100	PASS	AC=6;AF=0.00688742;AFR_AF=0.008;AMR_AF=0.0057;AN=2542;CIEND=0,181;CIPOS=-249,0;CS=DEL_union;EAS_AF=0.0131;END=53998329;EUR_AF=0;MC=BI_GS_DEL1_B4_P2951_149;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	54310880	DEL_pindel_53712	GCAATTTCTTAAAAAGTCAAACACTTATTCTATGACCCAGCAATTCTATTTCTAGGTATAATTCAAGAGAAATGAAAACATGTTTACAAAAAAAAAAACTTATATAGGGATGTTCATTGCAGCTT	G	.	PASS	AC=783;AF=0.207417;AFR_AF=0.1864;AMR_AF=0.2004;AN=3775;CS=DEL_pindel;EAS_AF=0.2317;END=54311004;EUR_AF=0.1945;NS=2504;SAS_AF=0.2298;SVTYPE=DEL	GT	1
X	54395463	YL_CN_ITU_4682	C	<CN0>	100	PASS	AC=5;AF=0.00450331;AFR_AF=0.007;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0079;END=54407670;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	54576156	DEL_pindel_53716	AAAGAAGACACGCATGTGCCCACATACACTTTGACCCTCGAACATAATCACATACCTAGAGTTACAG	A	.	PASS	AC=277;AF=0.0733775;AFR_AF=0.0698;AMR_AF=0.0649;AN=3775;CS=DEL_pindel;EAS_AF=0.0838;END=54576222;EUR_AF=0.0653;NS=2504;SAS_AF=0.0822;SVTYPE=DEL	GT	1
X	54639392	DEL_pindel_53717	ATTTGGATGTCTGGGTCTCTAGCAAGGCCAGGGAAGTTTTTCTTGATTATTCTACTGAATATGTTTTCCAAGCTTTTACGGTTCTCTTCTTTCTTAGGAACACTGATTATTCTTATGTTTGGTTGTTTAACATAATCCCAGACTCCTTGGAGACTTTGTTCATATTTCCTTACTCTTTTTTC	A	.	PASS	AC=588;AF=0.155762;AFR_AF=0.1386;AMR_AF=0.145;AN=3775;CS=DEL_pindel;EAS_AF=0.1688;END=54639573;EUR_AF=0.1671;NS=2504;SAS_AF=0.1616;SVTYPE=DEL	GT	0
X	54855750	YL_CN_LWK_4187	A	<CN0>	100	PASS	AC=10;AF=0.00397351;AFR_AF=0.011;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=54865350;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	54862268	DEL_pindel_53719	TGATCTTTTGTATTGTTTTCTTCATTTTAGTTTCTTTATTTGTGCTCTAACCTTTATTATTTTTTCTTCTACTAATTTAGGGTTTGGTTTGCTCTTGCTTTTCTAGTTCCTTAAGATGCATCATTATGTTGTTTATGTTTTTCTTCTTATTTGATGTAAGCACTTATAGCTGTAAAGTTCCCTGTGAGTCCCGCTCTTACTGTATCCCATAGGTTTTGGTATATTGTGTTTCCATTATCATCTGTTTTGAGAAAATTTTCAGTTTCTTTCAGAATTTCTTCATTGACCCACTCTTCATTTAGGGGCATATTCTTCGTTGACCCACTGTTCATTTAG	T	.	PASS	AC=897;AF=0.237616;AFR_AF=0.2233;AMR_AF=0.2347;AN=3775;CS=DEL_pindel;EAS_AF=0.2474;END=54862603;EUR_AF=0.2324;NS=2504;SAS_AF=0.2549;SVTYPE=DEL	GT	1
X	54884545	YL_CN_LWK_4188	A	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=54907315;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	54925379	DEL_pindel_53721	CCAGCAGGTTGTGCTGGGACACTGCTGTGATGCAGCCCCAAAGAAAATTGTG	C	.	PASS	AC=674;AF=0.178543;AFR_AF=0.1834;AMR_AF=0.1813;AN=3775;CS=DEL_pindel;EAS_AF=0.1715;END=54925430;EUR_AF=0.1841;NS=2504;SAS_AF=0.1713;SVTYPE=DEL	GT	1
X	54982950	BI_GS_DEL1_B5_P2952_598	A	<CN0>	100	PASS	AC=16;AF=0.0360265;AFR_AF=0.0319;AMR_AF=0.0363;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0288;END=54984213;EUR_AF=0.0392;NS=2504;SAS_AF=0.046;SVTYPE=DEL	GT	.
X	55107915	UW_VH_19612	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,501;CIPOS=-70,0;CS=DEL_union;EAS_AF=0;END=55243227;EUR_AF=0.0052;MC=UW_VH_20005,UW_VH_4662;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	55115353	BI_GS_DEL1_B2_P2953_39	G	<CN0>	100	PASS	AC=8;AF=0.00370861;AFR_AF=0.008;AMR_AF=0;AN=2542;CIEND=-39,39;CIPOS=-39,39;CS=DEL_union;EAS_AF=0.0026;END=55123489;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	55165288	UW_VH_25450	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,230;CIPOS=-226,0;CS=DEL_union;EAS_AF=0.0013;END=55170174;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	55174560	ALU_umary_ALU_12666	G	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,1,266,+;NS=2504;SAS_AF=0;SVLEN=265;SVTYPE=ALU;TSD=null	GT	0
X	55175838	L1_umary_LINE1_3057	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,61,6009,-;NS=2504;SAS_AF=0;SVLEN=5948;SVTYPE=LINE1;TSD=null	GT	0
X	55507944	DUP_gs.X_CNV_X_55507944_55511893	A	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=55511893;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	55585160	L1_umary_LINE1_3058	T	<INS:ME:LINE1>	.	PASS	AC=1082;AF=0.286623;AFR_AF=0.1785;AMR_AF=0.4084;AN=3775;CS=L1_umary;EAS_AF=0.356;EUR_AF=0.2755;MEINFO=LINE1,1337,6019,-;NS=2504;SAS_AF=0.2869;SVLEN=4682;SVTYPE=LINE1;TSD=ATATATTCTTGTTTTCTT	GT	0
X	55658310	BI_GS_DEL1_B2_P2953_287	G	<CN0>	100	PASS	AC=5;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-36,36;CIPOS=-36,36;CS=DEL_union;EAS_AF=0.0026;END=55661463;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	55666958	ALU_umary_ALU_12667	G	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluYb8,9,279,+;NS=2504;SAS_AF=0;SVLEN=270;SVTYPE=ALU;TSD=null	GT	0
X	55691019	YL_CN_GBR_4518	A	<CN0>	100	PASS	AC=7;AF=0.00370861;AFR_AF=0.005;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=55695082;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	55702401	UW_VH_3172	G	<CN0>	100	PASS	AC=842;AF=0.325298;AFR_AF=0.331;AMR_AF=0.4561;AN=2542;CIEND=0,454;CIPOS=-420,0;CS=DEL_union;EAS_AF=0.2814;END=55709877;EUR_AF=0.2911;MC=BI_GS_DEL1_B1_P2953_410,YL_CN_CLM_3848;NS=2504;SAS_AF=0.305;SVTYPE=DEL	GT	.
X	55721534	DEL_pindel_53731	GACCATCTGGACAGCAAAAAACTGATGTATAACGTTTTACTCCCCCAAAACTTAACTACTCAGCCTACTGTTGATGAGAAGTCTTACTGATAACATAAACAGTTGATTAACATATATTTCATATATTTTATGTATATATATATATGCTATAAACTGTATACTTACAATAAAAAAGCTAGAGGAAAGAAAATATTATTAAGAAAATCATAAAGAAGATAAAATAAATTTACTATTCATTTAGTGGAAGTGGATCATCATAAAGGTCTTCACAGTGACTAGGCTGAGGGGGAGGAGAAAGAAGAGAGGTTGGTCTTGCTGTCTCAGATGTGGCAGAGATGAAAGACGTGGAGGAGATGAAAGGTGAAGCAAGAGAGGCAGGTATATCCTGTTTAACTTTAGAGAAACACATCATAATTTCTGCCGGACTGTATTAGTCTCTTCTCACATTGCTATAAAGATACTACCTGAGGCTGGATAATTTATGAAGAAAAGAGGATGAATTTGACTCACAGTTCTGCATGTCTAGGGAGGCCTCAGGAAACTTACAATCATGGCTGAAGGTGAAGGGGAAGCAAGGCATGTCTTACATGATGGCAGGAGAGAGAGAGAGCATGCAGGGAATACTGCCTCTTTTAAAACGATCAGATTGTAATTGCCCAATGGGTTC	G	.	PASS	AC=311;AF=0.0823841;AFR_AF=0.0489;AMR_AF=0.0935;AN=3775;CS=DEL_pindel;EAS_AF=0.0942;END=55722200;EUR_AF=0.1044;NS=2504;SAS_AF=0.085;SVTYPE=DEL	GT	1
X	55801775	BI_GS_DEL1_B2_P2953_369	A	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0;END=55808928;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	55978161	BI_GS_DEL1_B1_P2953_567	T	<CN0>	100	PASS	AC=4;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.0013;END=55981434;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	56079069	DUP_gs.X_CNV_X_56079069_56102670	C	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56102670;EUR_AF=0.0026,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	56079467	DUP_gs.X_CNV_X_56079467_56197996	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56197996;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	56263746	DUP_gs.X_CNV_X_56263746_56293622	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56293622;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	56284324	DUP_gs.X_CNV_X_56284324_56375486	G	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56375486;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	56323765	YL_CN_JPT_4707	A	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=56329494;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	56376100	YL_CN_CDX_3833	A	<CN0>	100	PASS	AC=5;AF=0.00529801;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0092;END=56380217;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	56404702	L1_umary_LINE1_3059	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5451,6007,-;NS=2504;SAS_AF=0.0014;SVLEN=556;SVTYPE=LINE1;TSD=null	GT	0
X	56425378	DUP_gs.X_CNV_X_56425378_56480257	C	<CN0>,<CN2>	.	PASS	AC=4,5;AF=0.0010596,0.0013245;AFR_AF=0.002,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0.0026,0.0013;END=56480257;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	56454806	DUP_gs.X_CNV_X_56454806_56476291	C	<CN0>,<CN2>	.	PASS	AC=2,5;AF=0.0005298,0.0013245;AFR_AF=0,0;AMR_AF=0.0038,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56476291;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	56456104	UW_VH_10518	G	<CN0>	100	PASS	AC=33;AF=0.0222517;AFR_AF=0.0439;AMR_AF=0.0191;AN=2542;CIEND=0,466;CIPOS=-308,0;CS=DEL_union;EAS_AF=0.0092;END=56463112;EUR_AF=0.0183;MC=BI_GS_DEL1_B5_P2954_313;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	.
X	56458535	YL_CN_PUR_5658	C	<CN0>	100	PASS	AC=10;AF=0.00344371;AFR_AF=0.002;AMR_AF=0.0095;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=56476593;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	56468360	DUP_gs.X_CNV_X_56468360_56475190	G	<CN0>,<CN2>	.	PASS	AC=5,8;AF=0.0013245,0.00211921;AFR_AF=0,0.002;AMR_AF=0.0057,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=56475190;EUR_AF=0,0.0026;NS=2504;SAS_AF=0.0014,0.0028;SVTYPE=CNV	GT	0
X	56469196	YL_CN_PEL_4334	T	<CN0>	100	PASS	AC=10;AF=0.00344371;AFR_AF=0.002;AMR_AF=0.0095;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=56477683;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	56471419	DUP_gs.X_CNV_X_56471419_56501194	A	<CN0>,<CN2>	.	PASS	AC=0,6;AF=0,0.0015894;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=56501194;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	56485624	DUP_gs.X_CNV_X_56485624_56514805	T	<CN0>,<CN2>	.	PASS	AC=0,5;AF=0,0.0013245;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=56514805;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	56495410	DUP_gs.X_CNV_X_56495410_56516794	G	<CN0>,<CN2>	.	PASS	AC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=56516794;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	56660990	BI_GS_DEL1_B1_P2954_371	G	<CN0>	100	PASS	AC=347;AF=0.137748;AFR_AF=0.4357;AMR_AF=0.0534;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0013;END=56672840;EUR_AF=0.0222;MC=YL_CN_MXL_3738;NS=2504;SAS_AF=0.0515;SVTYPE=DEL	GT	.
X	56736234	DUP_gs.X_CNV_X_56736234_56761933	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56761933;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	56870760	BI_GS_DEL1_B5_P2954_590	C	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0;END=56880191;EUR_AF=0.0065;MC=YL_CN_LWK_4193;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	56875182	DEL_pindel_53737	GGAAGTAATGAATATGAAAATGAAAAACCGGTACCAGCCACTGCAAAAACACACCAAAATATAAAGACCCAAGACACTATGAAGAAACTGCATCAACTAATGT	G	.	PASS	AC=312;AF=0.082649;AFR_AF=0.0359;AMR_AF=0.0897;AN=3775;CS=DEL_pindel;EAS_AF=0.1322;END=56875284;EUR_AF=0.1084;NS=2504;SAS_AF=0.0627;SVTYPE=DEL	GT	1
X	56945446	BI_GS_DEL1_B3_P2954_33	G	<CN0>	100	PASS	AC=23;AF=0.00768212;AFR_AF=0.0239;AMR_AF=0.0019;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=56956844;EUR_AF=0.0052;MC=YL_CN_LWK_4194;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	56981660	BI_GS_DEL1_B4_P2954_110	T	<CN0>	100	PASS	AC=173;AF=0.243179;AFR_AF=0.2662;AMR_AF=0.2023;AN=2542;CIEND=-58,58;CIPOS=-58,58;CS=DEL_union;EAS_AF=0.2317;END=56982346;EUR_AF=0.218;NS=2504;SAS_AF=0.2799;SVTYPE=DEL	GT	.
X	57042857	BI_GS_DEL1_B5_P2955_40	T	<CN0>	100	PASS	AC=14;AF=0.0349669;AFR_AF=0.0359;AMR_AF=0.0286;AN=2542;CIEND=-30,30;CIPOS=-30,30;CS=DEL_union;EAS_AF=0.0419;END=57045761;EUR_AF=0.0313;NS=2504;SAS_AF=0.0348;SVTYPE=DEL	GT	.
X	57237328	YL_CN_LWK_4195	A	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=57261003;EUR_AF=0.0052;MC=BI_GS_DEL1_B4_P2955_29;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	57273089	DUP_gs.X_CNV_X_57273089_57349083	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=57349083;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	57384886	BI_GS_DEL1_B5_P2955_282	T	<CN0>	100	PASS	AC=5;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0;END=57391046;EUR_AF=0.0039;MC=YL_CN_LWK_4196;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	57514064	DEL_pindel_53741	CATGTGGAGTAACTGGGACCCTCATACATTTCTGGTAAGACTGTTGTCACATTGGTGCAGACTCTTTGGAAAACAATTTGGCATTTTCTTAA	C	.	PASS	AC=822;AF=0.217748;AFR_AF=0.2064;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2304;END=57514155;EUR_AF=0.2089;NS=2504;SAS_AF=0.2284;SVTYPE=DEL	GT	1
X	57730485	DUP_gs.X_CNV_X_57730485_57749071	G	<CN0>,<CN2>,<CN3>	.	PASS	AC=0,183,116;AF=0,0.0484768,0.0307285;AFR_AF=0,0.1695,0.1087;AMR_AF=0,0.0229,0.0134;AN=3775;CS=DUP_gs;EAS_AF=0,0,0;END=57749071;EUR_AF=0,0.0013,0;NS=2504;SAS_AF=0,0,0;SVTYPE=CNV	GT	0
X	57731363	DUP_gs.X_CNV_X_57731363_57753009	C	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=4,24,156,66,63;AF=0.0010596,0.00635762,0.0413245,0.0174834,0.0166887;AFR_AF=0.003,0.0209,0.1456,0.0608,0.0588;AMR_AF=0.0019,0.0057,0.0172,0.0095,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0,0,0,0;END=57753009;EUR_AF=0,0,0.0013,0,0;NS=2504;SAS_AF=0,0,0,0,0;SVTYPE=CNV	GT	0
X	57734979	DUP_gs.X_CNV_X_57734979_57751980	T	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>,<CN6>	.	PASS	AC=2,15,117,64,54,56;AF=0.0005298,0.00397351,0.0309934,0.0169536,0.0143046,0.0148344;AFR_AF=0.001,0.013,0.1117,0.0548,0.0518,0.0528;AMR_AF=0.0019,0.0038,0.0076,0.0172,0.0038,0.0057;AN=3775;CS=DUP_gs;EAS_AF=0,0,0,0,0,0;END=57751980;EUR_AF=0,0,0.0013,0,0,0;NS=2504;SAS_AF=0,0,0,0,0,0;SVTYPE=CNV	GT	0
X	57737171	BI_GS_DEL1_B4_P2955_84	A	<CN0>	100	PASS	AC=5;AF=0.00344371;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.0026;END=57743177;EUR_AF=0.0065;MC=YL_CN_CHB_4660;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	57740875	DUP_gs.X_CNV_X_57740875_57781019	A	<CN0>,<CN2>,<CN3>	.	PASS	AC=0,195,98;AF=0,0.0516556,0.0259603;AFR_AF=0,0.1795,0.0927;AMR_AF=0,0.0267,0.0095;AN=3775;CS=DUP_gs;EAS_AF=0,0,0;END=57781019;EUR_AF=0,0.0013,0;NS=2504;SAS_AF=0,0,0;SVTYPE=CNV	GT	0
X	57745725	DUP_gs.X_CNV_X_57745725_57764368	A	<CN0>,<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=1,25,160,60,64;AF=0.0002649,0.00662252,0.0423841,0.015894,0.0169536;AFR_AF=0.001,0.0219,0.1496,0.0548,0.0598;AMR_AF=0,0.0057,0.0172,0.0095,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0,0,0,0;END=57764368;EUR_AF=0,0,0.0013,0,0;NS=2504;SAS_AF=0,0,0,0,0;SVTYPE=CNV	GT	0
X	57806452	L1_umary_LINE1_3060	T	<INS:ME:LINE1>	.	PASS	AC=330;AF=0.0874172;AFR_AF=0.3051;AMR_AF=0.0439;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,4661,5990,-;NS=2504;SAS_AF=0;SVLEN=1329;SVTYPE=LINE1;TSD=CCAAGTTCTTATTT	GT	0
X	57834989	UW_VH_13284	G	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,287;CIPOS=-272,0;CS=DEL_union;EAS_AF=0;END=58009604;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	57909647	DUP_gs.X_CNV_X_57909647_57976974	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=57976974;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	58009791	DUP_gs.X_CNV_X_58009791_58039657	G	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=58039657;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	58064983	L1_umary_LINE1_3061	T	<INS:ME:LINE1>	.	PASS	AC=8;AF=0.00211921;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2415,6008,-;NS=2504;SAS_AF=0.0111;SVLEN=3593;SVTYPE=LINE1;TSD=CCAATCGCCATTTTCT	GT	0
X	58162791	L1_umary_LINE1_3062	G	<INS:ME:LINE1>	.	PASS	AC=21;AF=0.00556291;AFR_AF=0.0209;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2428,6018,+;NS=2504;SAS_AF=0;SVLEN=3590;SVTYPE=LINE1;TSD=AGAAACATCTGG	GT	0
X	58165738	BI_GS_DEL1_B1_P2956_82	C	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-70,71;CIPOS=-70,71;CS=DEL_union;EAS_AF=0;END=58200427;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	58195069	YL_CN_KHV_5016	C	<CN0>	100	PASS	AC=12;AF=0.00688742;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0131;END=58200490;EUR_AF=0.0117;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	58284542	BI_GS_DEL1_B5_P2956_153	G	<CN0>	100	PASS	AC=31;AF=0.0701987;AFR_AF=0.0728;AMR_AF=0.0954;AN=2542;CIEND=-8,9;CIPOS=-8,9;CS=DEL_union;EAS_AF=0.0497;END=58285918;EUR_AF=0.0862;NS=2504;SAS_AF=0.0529;SVTYPE=DEL	GT	.
X	58286833	YL_CN_BEB_3691	A	<CN0>	100	PASS	AC=34;AF=0.0754967;AFR_AF=0.0778;AMR_AF=0.0954;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0615;END=58289290;EUR_AF=0.0927;NS=2504;SAS_AF=0.0543;SVTYPE=DEL	GT	.
X	58286921	BI_GS_DEL1_B1_P2956_131	T	<CN0>	100	PASS	AC=44;AF=0.101192;AFR_AF=0.1117;AMR_AF=0.1031;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.0877;END=58288015;EUR_AF=0.124;NS=2504;SAS_AF=0.0752;SVTYPE=DEL	GT	.
X	58366303	YL_CN_TSI_4395	A	<CN0>	100	PASS	AC=11;AF=0.00741722;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=58371866;EUR_AF=0.0287;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	58449138	BI_GS_DEL1_B1_P2956_155	G	<CN0>	100	PASS	AC=18;AF=0.00900662;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.0026;END=58463235;EUR_AF=0.0339;MC=YL_CN_TSI_4396;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	58474022	YL_CN_ACB_5077	G	<CN0>	100	PASS	AC=18;AF=0.00688742;AFR_AF=0.012;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=58484512;EUR_AF=0.017;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	58477164	YL_CN_GWD_5855	T	<CN0>	100	PASS	AC=16;AF=0.00529801;AFR_AF=0.013;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=58483528;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	58491462	EM_DL_DEL104980	A	<CN0>	100	PASS	AC=33;AF=0.0476821;AFR_AF=0.0339;AMR_AF=0.042;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0537;END=58494023;EUR_AF=0.0718;NS=2504;SAS_AF=0.039;SVTYPE=DEL	GT	.
X	58506835	EM_DL_DEL104988	T	<CN0>	100	PASS	AC=1159;AF=0.466755;AFR_AF=0.2572;AMR_AF=0.4943;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.555;END=58527574;EUR_AF=0.5496;MC=YL_CN_LWK_4202;NS=2504;SAS_AF=0.5571;SVTYPE=DEL	GT	.
X	58546993	YL_CN_ACB_5080	G	<CN0>	100	PASS	AC=42;AF=0.0423841;AFR_AF=0.0199;AMR_AF=0.0592;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0314;END=58551258;EUR_AF=0.1018;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	58547609	ALU_umary_ALU_12668	T	<INS:ME:ALU>	.	PASS	AC=10;AF=0.00264901;AFR_AF=0.01;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,33,268,+;NS=2504;SAS_AF=0;SVLEN=235;SVTYPE=ALU;TSD=null	GT	0
X	61798850	YL_CN_MSL_4037	T	<CN0>	100	PASS	AC=44;AF=0.0188079;AFR_AF=0.0219;AMR_AF=0.0115;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0118;END=61815100;EUR_AF=0.0418;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	61801381	YL_CN_TSI_4398	A	<CN0>	100	PASS	AC=48;AF=0.026755;AFR_AF=0.0299;AMR_AF=0.0191;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.017;END=61806543;EUR_AF=0.0548;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	.
X	61802566	YL_CN_YRI_5574	C	<CN0>	100	PASS	AC=47;AF=0.0217218;AFR_AF=0.0259;AMR_AF=0.0153;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0144;END=61811091;EUR_AF=0.0431;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	61816697	YL_CN_MSL_4038	A	<CN0>	100	PASS	AC=41;AF=0.0188079;AFR_AF=0.012;AMR_AF=0.0115;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0209;END=61852694;EUR_AF=0.0457;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	61817407	YL_CN_PUR_5667	T	<CN0>	100	PASS	AC=47;AF=0.0203974;AFR_AF=0.012;AMR_AF=0.0267;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0092;END=61827370;EUR_AF=0.0496;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	.
X	61820779	EM_DL_DEL101174407	T	<CN0>	100	PASS	AC=54;AF=0.0680795;AFR_AF=0.0568;AMR_AF=0.0668;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0707;END=61822764;EUR_AF=0.1031;NS=2504;SAS_AF=0.0446;SVTYPE=DEL	GT	.
X	61833463	YL_CN_STU_4598	C	<CN0>	100	PASS	AC=46;AF=0.026755;AFR_AF=0.014;AMR_AF=0.0191;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0419;END=61839009;EUR_AF=0.0444;NS=2504;SAS_AF=0.0153;SVTYPE=DEL	GT	.
X	61834088	YL_CN_KHV_5021	T	<CN0>	100	PASS	AC=44;AF=0.0203974;AFR_AF=0.01;AMR_AF=0.0134;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0327;END=61852788;EUR_AF=0.0405;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	61840897	YL_CN_ESN_4425	C	<CN0>	100	PASS	AC=50;AF=0.0569536;AFR_AF=0.0479;AMR_AF=0.0496;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0733;END=61843617;EUR_AF=0.0796;NS=2504;SAS_AF=0.0334;SVTYPE=DEL	GT	.
X	61852945	YL_CN_LWK_4206	G	<CN0>	100	PASS	AC=32;AF=0.0418543;AFR_AF=0.0259;AMR_AF=0.0477;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.051;END=61856185;EUR_AF=0.064;NS=2504;SAS_AF=0.0265;SVTYPE=DEL	GT	.
X	61854719	L1_umary_LINE1_3063	G	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=LINE1,5698,5959,+;NS=2504;SAS_AF=0;SVLEN=261;SVTYPE=LINE1;TSD=AAAAAG	GT	0
X	61860120	YL_CN_JPT_4716	T	<CN0>	100	PASS	AC=26;AF=0.0135099;AFR_AF=0.004;AMR_AF=0.0095;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0105;END=61869706;EUR_AF=0.0418;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	61866963	YL_CN_LWK_4207	A	<CN0>	100	PASS	AC=28;AF=0.0121854;AFR_AF=0.004;AMR_AF=0.0095;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0105;END=61903408;EUR_AF=0.0366;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	61868490	YL_CN_JPT_4717	G	<CN0>	100	PASS	AC=34;AF=0.0219868;AFR_AF=0.006;AMR_AF=0.021;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0314;END=61873518;EUR_AF=0.047;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	.
X	61892192	YL_CN_KHV_5022	G	<CN0>	100	PASS	AC=68;AF=0.0415894;AFR_AF=0.0329;AMR_AF=0.0382;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0445;END=61898771;EUR_AF=0.0744;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	.
X	61893933	YL_CN_IBS_4084	T	<CN0>	100	PASS	AC=74;AF=0.0731126;AFR_AF=0.0648;AMR_AF=0.0782;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0812;END=61896986;EUR_AF=0.1057;NS=2504;SAS_AF=0.0376;SVTYPE=DEL	GT	.
X	61935752	DUP_gs.X_CNV_X_61935752_62091060	T	<CN0>,<CN2>,<CN3>	.	PASS	AC=0,1,1;AF=0,0.0002649,0.0002649;AFR_AF=0,0,0;AMR_AF=0,0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0,0;END=62091060;EUR_AF=0,0.0013,0.0013;NS=2504;SAS_AF=0,0,0;SVTYPE=CNV	GT	0
X	61951926	YL_CN_CHB_4668	A	<CN0>	100	PASS	AC=143;AF=0.156026;AFR_AF=0.1515;AMR_AF=0.1431;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1688;END=61954115;EUR_AF=0.1684;NS=2504;SAS_AF=0.1448;SVTYPE=DEL	GT	.
X	61982511	YL_CN_LWK_4209	C	<CN0>	100	PASS	AC=52;AF=0.0217218;AFR_AF=0.0169;AMR_AF=0.0229;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0196;END=61994437;EUR_AF=0.0392;NS=2504;SAS_AF=0.0111;SVTYPE=DEL	GT	.
X	61988614	BI_GS_DEL1_B2_P2959_19	C	<CN0>	100	PASS	AC=63;AF=0.0214569;AFR_AF=0.015;AMR_AF=0.0153;AN=2542;CIEND=-49,49;CIPOS=-49,49;CS=DEL_union;EAS_AF=0.0157;END=62000171;EUR_AF=0.0339;MC=YL_CN_TSI_4399;NS=2504;SAS_AF=0.0279;SVTYPE=DEL	GT	.
X	62017603	YL_CN_LWK_4210	C	<CN0>	100	PASS	AC=36;AF=0.0166887;AFR_AF=0.0189;AMR_AF=0.0153;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0105;END=62026232;EUR_AF=0.0352;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	62060592	ALU_umary_ALU_12669	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	62082866	L1_umary_LINE1_3064	A	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,4697,5999,-;NS=2504;SAS_AF=0;SVLEN=1302;SVTYPE=LINE1;TSD=null	GT	0
X	62106904	ALU_umary_ALU_12670	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,29,255,+;NS=2504;SAS_AF=0.0014;SVLEN=226;SVTYPE=ALU;TSD=null	GT	0
X	62116559	YL_CN_CHB_4670	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=62137852;EUR_AF=0.0052;MC=BI_GS_DEL1_B4_P2960_19;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	62205645	DUP_gs.X_CNV_X_62205645_62226504	A	<CN0>,<CN2>	.	PASS	AC=0,8;AF=0,0.00211921;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=62226504;EUR_AF=0,0.0065;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	62206160	DUP_gs.X_CNV_X_62206160_62276540	T	<CN0>,<CN2>	.	PASS	AC=0,6;AF=0,0.0015894;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=62276540;EUR_AF=0,0.0039;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	62215449	BI_GS_DEL1_B3_P2960_7	T	<CN0>	100	PASS	AC=62;AF=0.0757616;AFR_AF=0.0837;AMR_AF=0.0668;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0576;END=62217589;EUR_AF=0.0783;MC=YL_CN_PJL_5049;NS=2504;SAS_AF=0.0877;SVTYPE=DEL	GT	.
X	62242859	BI_GS_DEL1_B3_P2960_10	C	<CN0>	100	PASS	AC=6;AF=0.00238411;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-6,6;CIPOS=-6,6;CS=DEL_union;EAS_AF=0.0013;END=62246525;EUR_AF=0.0026;MC=YL_CN_PJL_5050;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	62257804	DUP_gs.X_CNV_X_62257804_62284188	A	<CN0>,<CN2>	.	PASS	AC=0,7;AF=0,0.0018543;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=62284188;EUR_AF=0,0.0052;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	62265030	BI_GS_DEL1_B3_P2960_12	C	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-25,25;CIPOS=-25,25;CS=DEL_union;EAS_AF=0;END=62287973;EUR_AF=0.0052;MC=YL_CN_ITU_4694;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	62288913	DUP_gs.X_CNV_X_62288913_62469720	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=62469720;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	62294712	BI_GS_DEL1_B2_P2960_123	T	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-6,6;CIPOS=-6,6;CS=DEL_union;EAS_AF=0.0026;END=62310650;EUR_AF=0.0065;MC=YL_CN_CDX_3839;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	62294772	DUP_gs.X_CNV_X_62294772_62310640	A	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0026,0.0013;END=62310640;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	62453551	DUP_gs.X_CNV_X_62453551_62508791	T	<CN0>,<CN2>	.	PASS	AC=0,89;AF=0,0.0235762;AFR_AF=0,0.004;AMR_AF=0,0.0267;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=62508791;EUR_AF=0,0.0757;NS=2504;SAS_AF=0,0.0181;SVTYPE=DUP	GT	0
X	62477056	DUP_gs.X_CNV_X_62477056_62510281	A	<CN0>,<CN2>	.	PASS	AC=0,88;AF=0,0.0233113;AFR_AF=0,0.003;AMR_AF=0,0.0267;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=62510281;EUR_AF=0,0.0757;NS=2504;SAS_AF=0,0.0181;SVTYPE=DUP	GT	0
X	62577933	UW_VH_10259	A	<CN0>	100	PASS	AC=29;AF=0.00980132;AFR_AF=0.0309;AMR_AF=0.0038;AN=2542;CIEND=0,316;CIPOS=-300,0;CS=DEL_union;EAS_AF=0;END=62587869;EUR_AF=0.0052;MC=BI_GS_DEL1_B3_P2960_20,YL_CN_MSL_4042;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	62637668	DUP_gs.X_CNV_X_62637668_62652377	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=62652377;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	62685751	BI_GS_DEL1_B3_P2960_25	C	<CN0>	100	PASS	AC=23;AF=0.00821192;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0;END=62694646;EUR_AF=0.0052;MC=YL_CN_PJL_5053;NS=2504;SAS_AF=0.0334;SVTYPE=DEL	GT	.
X	62704919	DEL_pindel_53742	GTGAGAACTGGCTATCCATATGCAGAAGAATGAAACTGGACCATTACCTACCACCATATACAAAAATTAGCTTGAGAAGGATTAAGGACCTAAATGTAAGA	G	.	PASS	AC=305;AF=0.0807947;AFR_AF=0.0768;AMR_AF=0.0706;AN=3775;CS=DEL_pindel;EAS_AF=0.1296;END=62705019;EUR_AF=0.0522;NS=2504;SAS_AF=0.0724;SVTYPE=DEL	GT	1
X	62951213	DEL_pindel_53750	CTAGATTCCTTTTAATACAGCCTTGAAAACGCTCTGGCTATCTTGCCCAAAGTGTTGAAGGATAATCATCCTCCCTATTTTTGGGAAGGTGTGAACCAGGCTGCCCCAACAATAGCTATGAGGTACCATGGTGTACAGTAAAGACTCAGATTGGCTATTGGAAGAAAATCTGCCAGTAACTCACCAAATGATCTTGGACAGGTCCCTTTCCCTGTCTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTAGA	C	.	PASS	AC=1150;AF=0.304636;AFR_AF=0.2941;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.301;END=62951461;EUR_AF=0.2872;NS=2504;SAS_AF=0.3412;SVTYPE=DEL	GT	1
X	62959740	L1_umary_LINE1_3065	T	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=LINE1,2909,5871,-;NS=2504;SAS_AF=0;SVLEN=2962;SVTYPE=LINE1;TSD=CTTAAAACTCTT	GT	0
X	62975795	BI_GS_DEL1_B4_P2960_121	G	<CN0>	100	PASS	AC=22;AF=0.0529801;AFR_AF=0.0518;AMR_AF=0.0534;AN=2542;CIEND=-33,33;CIPOS=-33,33;CS=DEL_union;EAS_AF=0.0406;END=62977144;EUR_AF=0.0822;NS=2504;SAS_AF=0.0362;SVTYPE=DEL	GT	.
X	63021205	ALU_umary_ALU_12671	G	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,6,268,+;NS=2504;SAS_AF=0;SVLEN=262;SVTYPE=ALU;TSD=null	GT	0
X	63035864	ALU_umary_ALU_12672	A	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa3_5,14,272,-;NS=2504;SAS_AF=0.0028;SVLEN=258;SVTYPE=ALU;TSD=null	GT	0
X	63044083	BI_GS_DEL1_B3_P2961_3	G	<CN0>	100	PASS	AC=45;AF=0.0164238;AFR_AF=0.0528;AMR_AF=0.0115;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=63051019;EUR_AF=0.0039;MC=YL_CN_ASW_4560,UW_VH_7628;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	63097843	DEL_pindel_53755	AAATCCAAAATTAAAAGGCTGCATATGCTATGATTCCAACCATATGACATTCTGGAAAAGGCCAATCTATGAAGACAGTAAAAAAAAAAAAATATCAGTAGTTGCCAGGGGTTAGTGGGGAGGGAGCCATGAATAGGCAGGGCACAGAG	A	.	PASS	AC=1159;AF=0.30702;AFR_AF=0.2991;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2919;END=63097991;EUR_AF=0.2977;NS=2504;SAS_AF=0.3454;SVTYPE=DEL	GT	1
X	63127039	DEL_pindel_53756	ACAGAGAGCCAAATCATGAGTCAACTCCCATTCACAATTGCTACTAAGAGAATAAAATACCTAGGAATACAACTTACAAGAGATGTGAAGGACCTCTTCAAGAAGAACCACAAACCACTGCTCAAGGAAATAAGAGAGGACACAAGCAAACGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATTGTGAAAATGGCCATACCGGGCATAGTAATTTATAGATTCAATGCTATCCCCATCGAACTACCATTGGCTTTCTTCACAGAATTGGACAAAAACTATTTTAAACTTCATACGGAACCAAAAAAAAAGCCCGCATAGCCAATACAATCCT	A	.	PASS	AC=764;AF=0.202384;AFR_AF=0.1755;AMR_AF=0.208;AN=3775;CS=DEL_pindel;EAS_AF=0.2225;END=63127378;EUR_AF=0.205;NS=2504;SAS_AF=0.2117;SVTYPE=DEL	GT	0
X	63164414	DEL_pindel_53757	TGAATGGTTCTGGTAATGGCCAGAACAAAGTCAAAAGCCCTGAGAACACATAGAACTTGACCTCAGCCGGAAGTATGGTTAAAAACATAAACCAAATGGGGGC	T	.	PASS	AC=1219;AF=0.322914;AFR_AF=0.333;AMR_AF=0.313;AN=3775;CS=DEL_pindel;EAS_AF=0.3115;END=63164516;EUR_AF=0.3003;NS=2504;SAS_AF=0.3524;SVTYPE=DEL	GT	1
X	63229090	BI_GS_DEL1_B1_P2961_141	T	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0013;END=63244159;EUR_AF=0.0065;MC=EM_DL_DEL105180;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	63387854	DEL_pindel_53759	TATATATATATATATATATATATATATATATATATATATGTATATATATAC	T	.	PASS	AC=1025;AF=0.271523;AFR_AF=0.2632;AMR_AF=0.271;AN=3775;CS=DEL_pindel;EAS_AF=0.2474;END=63387904;EUR_AF=0.282;NS=2504;SAS_AF=0.2981;SVTYPE=DEL	GT	1
X	63440816	ALU_umary_ALU_12673	T	<INS:ME:ALU>	.	PASS	AC=33;AF=0.00874172;AFR_AF=0.0249;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=AluYa5,21,280,+;NS=2504;SAS_AF=0.0042;SVLEN=259;SVTYPE=ALU;TSD=AAAAAACCAAGGTATT	GT	0
X	63537694	EM_DL_DEL105181	C	<CN0>	100	PASS	AC=6;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0;END=63543054;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	63538179	DUP_gs.X_CNV_X_63538179_63542761	T	<CN0>,<CN2>	.	PASS	AC=1,4;AF=0.0002649,0.0010596;AFR_AF=0.001,0.002;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=63542761;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	63627966	BI_GS_DEL1_B2_P2961_322	C	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-15,15;CIPOS=-15,15;CS=DEL_union;EAS_AF=0;END=63635547;EUR_AF=0.0039;MC=YL_CN_PEL_4346;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	63670635	BI_GS_DEL1_B3_P2961_20	T	<CN0>	100	PASS	AC=7;AF=0.00264901;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-39,39;CIPOS=-39,39;CS=DEL_union;EAS_AF=0;END=63675332;EUR_AF=0.0052;MC=YL_CN_BEB_3700;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	63716412	DUP_gs.X_CNV_X_63716412_63735365	G	<CN0>,<CN2>	.	PASS	AC=0,70;AF=0,0.018543;AFR_AF=0,0.0668;AMR_AF=0,0.0057;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=63735365;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	63722121	DUP_gs.X_CNV_X_63722121_63737562	C	<CN0>,<CN2>	.	PASS	AC=0,72;AF=0,0.0190728;AFR_AF=0,0.0688;AMR_AF=0,0.0057;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=63737562;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	63819125	BI_GS_DEL1_B5_P2961_631	C	<CN0>	100	PASS	AC=35;AF=0.0561589;AFR_AF=0.0499;AMR_AF=0.0668;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0537;END=63820418;EUR_AF=0.0614;MC=UW_VH_21328;NS=2504;SAS_AF=0.0543;SVTYPE=DEL	GT	.
X	64004962	BI_GS_DEL1_B4_P2962_1	G	<CN0>	100	PASS	AC=12;AF=0.00397351;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0105;END=64062235;EUR_AF=0.0052;MC=YL_CN_BEB_3701;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	64039290	YL_CN_ESN_4432	G	<CN0>	100	PASS	AC=18;AF=0.00662252;AFR_AF=0.011;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0105;END=64046207;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	64074221	ALU_umary_ALU_12674	A	<INS:ME:ALU>	.	PASS	AC=14;AF=0.00370861;AFR_AF=0.012;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5a1,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=AAGAGTTCAGCTGGA	GT	0
X	64085142	UW_VH_9143	A	<CN0>	100	PASS	AC=41;AF=0.0145695;AFR_AF=0.003;AMR_AF=0.0916;AN=2542;CIEND=0,44;CIPOS=-51,0;CS=DEL_union;EAS_AF=0;END=64097518;EUR_AF=0.0052;MC=YL_CN_MXL_3748,BI_GS_DEL1_B1_P2962_59;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	64100990	DUP_gs.X_CNV_X_64100990_64109040	A	<CN0>,<CN2>	.	PASS	AC=0,9;AF=0,0.00238411;AFR_AF=0,0.009;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=64109040;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	64104128	DUP_gs.X_CNV_X_64104128_64108392	C	<CN0>,<CN2>	.	PASS	AC=0,11;AF=0,0.00291391;AFR_AF=0,0.011;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=64108392;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	64109687	UW_VH_15039	G	<CN0>	100	PASS	AC=7;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,154;CIPOS=-148,0;CS=DEL_union;EAS_AF=0.0052;END=64114033;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	64240820	UW_VH_9390	C	<CN0>	100	PASS	AC=137;AF=0.15894;AFR_AF=0.1894;AMR_AF=0.1489;AN=2542;CIEND=0,431;CIPOS=-294,0;CS=DEL_union;EAS_AF=0.1427;END=64241709;EUR_AF=0.1384;MC=BI_GS_DEL1_B2_P2962_121;NS=2504;SAS_AF=0.163;SVTYPE=DEL	GT	.
X	64284527	BI_GS_DEL1_B3_P2962_8	G	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.006;AMR_AF=0;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0;END=64292263;EUR_AF=0.0039;MC=YL_CN_ESN_4433;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	64379708	BI_GS_DEL1_B2_P2962_192	C	<CN0>	100	PASS	AC=13;AF=0.00609272;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0.0052;END=64383550;EUR_AF=0.017;MC=YL_CN_KHV_5027;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	64393277	YL_CN_CLM_3864	T	<CN0>	100	PASS	AC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=64421874;EUR_AF=0.0039;MC=BI_GS_DEL1_B2_P2962_198;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	64433941	L1_umary_LINE1_3066	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,1444,6017,+;NS=2504;SAS_AF=0;SVLEN=4573;SVTYPE=LINE1;TSD=null	GT	0
X	64487672	ALU_umary_ALU_12675	T	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluYb7_4,28,281,+;NS=2504;SAS_AF=0;SVLEN=253;SVTYPE=ALU;TSD=null	GT	0
X	64506973	DEL_pindel_53772	TCCCAACACCCCACTCCCAGAATTAGACAGATTATCTAGACAGAACATCAATAAGAAAAAAATCAGATTTAAACTGCACTTTTGGCCAAGTGAACC	T	.	PASS	AC=127;AF=0.0336424;AFR_AF=0.0219;AMR_AF=0.0344;AN=3775;CS=DEL_pindel;EAS_AF=0.0353;END=64507068;EUR_AF=0.0574;NS=2504;SAS_AF=0.0223;SVTYPE=DEL	GT	0
X	64589620	BI_GS_DEL1_B2_P2962_283	T	<CN0>	100	PASS	AC=8;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-47,48;CIPOS=-47,48;CS=DEL_union;EAS_AF=0.0026;END=64593101;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	64615650	DEL_pindel_53773	CCTCTTTGTACCTCTGGTAGAATTTGGCTGTGAATCTGTCTGGTCCTGGCCTTT	C	.	PASS	AC=760;AF=0.201324;AFR_AF=0.1685;AMR_AF=0.208;AN=3775;CS=DEL_pindel;EAS_AF=0.2147;END=64615703;EUR_AF=0.1932;NS=2504;SAS_AF=0.2368;SVTYPE=DEL	GT	1
X	64802874	BI_GS_DEL1_B5_P2962_613	A	<CN0>	100	PASS	AC=4;AF=0.0013245;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-31,32;CIPOS=-31,32;CS=DEL_union;EAS_AF=0;END=64808545;EUR_AF=0.0026;MC=YL_CN_GIH_3439;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	64842924	UW_VH_7698	T	<CN0>	100	PASS	AC=198;AF=0.182781;AFR_AF=0.2283;AMR_AF=0.1431;AN=2542;CIEND=0,294;CIPOS=-270,0;CS=DEL_union;EAS_AF=0.195;END=64844507;EUR_AF=0.1449;MC=BI_GS_DEL1_B5_P2962_640;NS=2504;SAS_AF=0.1755;SVTYPE=DEL	GT	.
X	64905469	DUP_gs.X_CNV_X_64905469_64921930	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=64921930;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	65020867	YL_CN_FIN_4309	A	<CN0>	100	PASS	AC=9;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=65044217;EUR_AF=0.0104;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	65067869	DUP_gs.X_CNV_X_65067869_65093100	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=65093100;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	65079528	DEL_pindel_53783	GGTTCTGCTCAAATGTCACCTCCTCAAGTAAGCTCTCCCTGACCTGCCCTCCCTCTTACTGCTCCTGAGTCAAAGCTCGTTCTGT	G	.	PASS	AC=62;AF=0.0164238;AFR_AF=0.0179;AMR_AF=0.0191;AN=3775;CS=DEL_pindel;EAS_AF=0.0157;END=65079612;EUR_AF=0.0117;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	0
X	65113960	UW_VH_8148	A	<CN0>	100	PASS	AC=344;AF=0.295894;AFR_AF=0.4138;AMR_AF=0.2653;AN=2542;CIEND=0,225;CIPOS=-401,0;CS=DEL_union;EAS_AF=0.2147;END=65114553;EUR_AF=0.2559;MC=BI_GS_DEL1_B4_P2963_19;NS=2504;SAS_AF=0.2827;SVTYPE=DEL	GT	.
X	65113961	DEL_pindel_53784	GACTCACTTGAGGAGGCAGTCTGTCCATTGTTGGAGCTCAAACGCCATGCTGGGAGAACCACTTCTCTCTTCCGAGCTGTCAGGCAGGGACATCTAAGTCTGCAGAAGCTGTCTGCTGCCTTTTGTACAGATATGCCCTGCCCCCAGAGGTGGAATCTAGAGAGGCAGTAGGCCTTGCTGAGCTGTGGTGGGCTCCACCCAGTTTGAGCTTCCCTGCCACTTTGTTTACACCGTGAGCATAGAACTGCCTACTCAAGCGTGAGTAATAGTGGATGCCCCTCCCCTGCCAAGCTCCAGTGTCACAGGTCAATCTCAGACTGCTGCGCTAGCACCAAGCAAGGCTCCGTGGGTGTGGGACCTGCCGAGCCAGGCATGGGGAGGGAATCTCCAAATCTGCTGGTTGCGAAGACCCCTGGGAAAAGTGCAGTATTTGTGCAGGAGTGTACCATTCCTCC	G	.	PASS	AC=1392;AF=0.368742;AFR_AF=0.4965;AMR_AF=0.3244;AN=3775;CS=DEL_pindel;EAS_AF=0.3102;END=65114415;EUR_AF=0.2963;NS=2504;SAS_AF=0.3621;SVTYPE=DEL	GT	1
X	65542317	BI_GS_DEL1_B5_P2963_454	A	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-23,23;CIPOS=-23,23;CS=DEL_union;EAS_AF=0;END=65551912;EUR_AF=0.0052;MC=EM_DL_DEL105211,YL_CN_PJL_5054;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	65578913	UW_VH_17629	T	<CN0>	100	PASS	AC=7;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,131;CIPOS=-55,0;CS=DEL_union;EAS_AF=0.0026;END=65582755;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	65664331	DEL_pindel_53791	TAATATATTTTATCTATATATAATACTTTCATCAAGCAAGTACAATACTAGATACATGGAGAAGTCCTGAGCTG	T	.	PASS	AC=895;AF=0.237086;AFR_AF=0.2114;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2395;END=65664404;EUR_AF=0.2415;NS=2504;SAS_AF=0.2688;SVTYPE=DEL	GT	1
X	65771494	DUP_gs.X_CNV_X_65771494_65864920	G	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=65864920;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	65772935	DUP_gs.X_CNV_X_65772935_65794679	G	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=65794679;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	65777788	DUP_gs.X_CNV_X_65777788_65785930	T	<CN0>,<CN2>	.	PASS	AC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=65785930;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	65786559	BI_GS_DEL1_B3_P2963_26	C	<CN0>	100	PASS	AC=5;AF=0.00741722;AFR_AF=0.009;AMR_AF=0.0076;AN=2542;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0.0065;END=65789636;EUR_AF=0.0039;MC=YL_CN_GWD_5864;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	65806480	DUP_gs.X_CNV_X_65806480_65827290	T	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0.001;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=65827290;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	65820729	DUP_gs.X_CNV_X_65820729_65872395	A	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=65872395;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	65916848	DEL_pindel_53798	CAAGATGTTTATATCAACCCAGATTCTGGTCCATAAACAAGAAGTCTCTTCCTGCATTGTTCAAAGA	C	.	PASS	AC=6;AF=0.0015894;AFR_AF=0.006;AMR_AF=0;AN=3775;CS=DEL_pindel;EAS_AF=0;END=65916914;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0
X	65918627	DEL_pindel_53800	CCAAATAGAGAAAGTGACAAAATTGTTTTTGTGTAAATTATTTTCATCTTGGGCATTTTTTACACTTATGCCT	C	.	PASS	AC=1303;AF=0.345166;AFR_AF=0.4018;AMR_AF=0.3263;AN=3775;CS=DEL_pindel;EAS_AF=0.3154;END=65918699;EUR_AF=0.3094;NS=2504;SAS_AF=0.3496;SVTYPE=DEL	GT	1
X	65936095	DUP_gs.X_CNV_X_65936095_65960056	G	<CN0>,<CN2>	.	PASS	AC=0,12;AF=0,0.00317881;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0157;END=65960056;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	65967173	DEL_pindel_53801	TAAACGTATGTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	.	PASS	AC=1199;AF=0.317616;AFR_AF=0.321;AMR_AF=0.3206;AN=3775;CS=DEL_pindel;EAS_AF=0.301;END=65967515;EUR_AF=0.2963;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.351;SVTYPE=DEL_ALU	GT	1
X	66028246	DEL_pindel_53802	AATACAGCTAAAACATCACAAGAAAAAAAACTATATTTCAATATCCCTGATGAATTTAGACGTAAGAATCCTCAAGAAAACACTAGCAAATCAAATGTAATGACACAGTAAAAGAATCATATGCCATGGCCAAGTATGATTGATTTCTAGGATGCAAGAATGGTTCAACATAGAAAAATCAATTAATGTAATATGCCACATTAACAGAATAAAGGTTAAAAATTACATGATCATCTCAATAGATGCAGAAAAAACATTTGACAAAATTCAACATCATTTTATGATAGAAACTCTAAACAAAATAGAAATATAAATAAATTACCTCAACATAATAGAAACAATATATTTAAAGCCCATAGTTAGCATCATATTCAATGATGAAAAACTGAAAGCTCTTCCTCTAAGATCAGGAATAAGACAGGAATGTCCACTCTCACCAATTCTATTCAACATAGTACTGAAAGTCCTTGCCAGAGCAATTCAGCAATAAAAACAAAGCCATCCAAGTAAGAAAGGAAGAGGTAGTATTATCTCCACTGATGACATAACTTTATATGTAAAATACCCTAAAGACTCTACAAACTATTTGGGCTAATAAACAAGTTCAGTAAAGTTGCAGGACACAAAATCAACATACAAAAGTCAATTGTGTTTCTACACAATAATGACAAACTATCTAACAAGGAAATTAGGAAAACAATCCCATTTATAATAGCACTAAAATAATAAAATATTTGATAATAAAATTAAATAAGAAGGTGAAATACTTGTTTACTAAGAACTACAAAATATTAATAAAGAATTGAAGAGGACACAAACAGAAAGAC	A	.	PASS	AC=861;AF=0.228079;AFR_AF=0.1745;AMR_AF=0.2271;AN=3775;CS=DEL_pindel;EAS_AF=0.2421;END=66029072;EUR_AF=0.2376;NS=2504;SAS_AF=0.2786;SVTYPE=DEL	GT	0
X	66048235	DEL_pindel_53804	ATGACGGGATTAAGAGATTAAAGTAAAGACAGGCATAGGAAATCACAAGAGTATTGACTGGGGAAG	A	.	PASS	AC=1060;AF=0.280795;AFR_AF=0.2672;AMR_AF=0.2729;AN=3775;CS=DEL_pindel;EAS_AF=0.284;END=66048300;EUR_AF=0.2794;NS=2504;SAS_AF=0.3036;SVTYPE=DEL	GT	1
X	66053601	BI_GS_DEL1_B3_P2964_1	A	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0013;END=66060370;EUR_AF=0.0039;MC=YL_CN_GWD_5865;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	66064302	BI_GS_DEL1_B4_P2964_11	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-44,45;CIPOS=-44,45;CS=DEL_union;EAS_AF=0;END=66074634;EUR_AF=0.0039;MC=YL_CN_ITU_4697;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	66103777	DEL_pindel_53808	TCTTTCTGTCTGAAATGCTCTCAGTCCCTGCCCCTGACAGCTTTATTGCTCACTCCTTCCTCTCCTTCAAATATTTGTTCAAGTAAAACCTACTGAGACTTAACCACCCTATTTAATATTGCAAA	T	.	PASS	AC=2298;AF=0.608742;AFR_AF=0.349;AMR_AF=0.6794;AN=3775;CS=DEL_pindel;EAS_AF=0.7605;END=66103901;EUR_AF=0.6697;NS=2504;SAS_AF=0.6936;SVTYPE=DEL	GT	1
X	66107357	BI_GS_DEL1_B4_P2964_27	T	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0013;END=66113165;EUR_AF=0.0091;MC=YL_CN_CEU_5431;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	66150902	DUP_gs.X_CNV_X_66150902_66190048	C	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0.003;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=66190048;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	66180881	YL_CN_JPT_4722	C	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=66186339;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	66318264	ALU_umary_ALU_12676	T	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	66333799	DEL_pindel_53813	TAAATGCTGGACTACTTGCTACACTGGTCACATTCTGCTTTGTGCCCAAATCAGCTGGATATTACTGCATCTCCTCTACTAAGCAGGGAACTCCTCAGAGGTGGAGGTTGTGCCTGATTCCTCTCTGTTCCCCACAGCACAGTGAAACGCTCATTCCTATAACTGAAGCTCCAG	T	.	PASS	AC=2218;AF=0.58755;AFR_AF=0.3619;AMR_AF=0.6718;AN=3775;CS=DEL_pindel;EAS_AF=0.6715;END=66333972;EUR_AF=0.6841;NS=2504;SAS_AF=0.649;SVTYPE=DEL	GT	1
X	66412590	DUP_gs.X_CNV_X_66412590_66443395	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=66443395;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	66456716	UW_VH_2147	T	<CN0>	100	PASS	AC=98;AF=0.127947;AFR_AF=0.1206;AMR_AF=0.126;AN=2542;CIEND=0,286;CIPOS=-295,0;CS=DEL_union;EAS_AF=0.1152;END=66457683;EUR_AF=0.154;MC=BI_GS_DEL1_B4_P2964_72;NS=2504;SAS_AF=0.1253;SVTYPE=DEL	GT	.
X	66483120	UW_VH_13697	G	<CN0>	100	PASS	AC=38;AF=0.0765563;AFR_AF=0.0748;AMR_AF=0.0592;AN=2542;CIEND=0,308;CIPOS=-266,0;CS=DEL_union;EAS_AF=0.0903;END=66484333;EUR_AF=0.0875;MC=BI_GS_DEL1_B2_P2964_242,EM_DL_DEL101175669;NS=2504;SAS_AF=0.0655;SVTYPE=DEL	GT	.
X	66531901	UW_VH_6392	A	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,274;CIPOS=-336,0;CS=DEL_union;EAS_AF=0.0026;END=66537807;EUR_AF=0.0039;MC=BI_GS_DEL1_B4_P2964_84;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	66636586	DUP_gs.X_CNV_X_66636586_66702070	T	<CN0>,<CN2>	.	PASS	AC=1,7;AF=0.0002649,0.0018543;AFR_AF=0,0;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=66702070;EUR_AF=0,0.0039;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	66661663	DUP_gs.X_CNV_X_66661663_66732568	G	<CN0>,<CN2>	.	PASS	AC=0,7;AF=0,0.0018543;AFR_AF=0,0;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=66732568;EUR_AF=0,0.0039;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	66670052	YL_CN_LWK_4216	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=66694452;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	66879897	EM_DL_DEL105233	A	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0;END=66924329;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	66993442	UW_VH_5772	C	<CN0>	100	PASS	AC=105;AF=0.159735;AFR_AF=0.1834;AMR_AF=0.1412;AN=2542;CIEND=0,271;CIPOS=-340,0;CS=DEL_union;EAS_AF=0.1414;END=66994080;EUR_AF=0.1723;MC=BI_GS_DEL1_B1_P2964_581;NS=2504;SAS_AF=0.1462;SVTYPE=DEL	GT	.
X	67058941	DEL_pindel_53828	TTCTACCCCTGGGACTGTAGTGGTGATGGCCATGGGGTGAGGCTCCTCTGTCTTTGAAAAGGGGAGGGAAGAGTGGGGAGG	T	.	PASS	AC=1174;AF=0.310993;AFR_AF=0.3031;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2932;END=67059021;EUR_AF=0.3055;NS=2504;SAS_AF=0.351;SVTYPE=DEL	GT	0
X	67080365	UW_VH_6000	C	<CN0>	100	PASS	AC=36;AF=0.0556291;AFR_AF=0.0429;AMR_AF=0.0458;AN=2542;CIEND=0,275;CIPOS=-276,0;CS=DEL_union;EAS_AF=0.1021;END=67082022;EUR_AF=0.0509;MC=BI_GS_DEL1_B1_P2965_38;NS=2504;SAS_AF=0.0362;SVTYPE=DEL	GT	.
X	67085421	ALU_umary_ALU_12677	A	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	67123822	UW_VH_3025	A	<CN0>	100	PASS	AC=692;AF=0.26649;AFR_AF=0.3699;AMR_AF=0.2061;AN=2542;CIEND=0,496;CIPOS=-396,0;CS=DEL_union;EAS_AF=0.3364;END=67130299;EUR_AF=0.1266;MC=EM_DL_DEL105239,BI_GS_DEL1_B1_P2965_64,YL_CN_GIH_3441;NS=2504;SAS_AF=0.2409;SVTYPE=DEL	GT	.
X	67135096	DEL_pindel_53833	CTTTCTGGAGGAGTCTTTAGGGTTTTTGAGGTGAACAATCATATCATCAGCAAACAGTGACAGTTGACTTCCTCTTCACTGGTTTGG	C	.	PASS	AC=378;AF=0.100132;AFR_AF=0.1585;AMR_AF=0.0992;AN=3775;CS=DEL_pindel;EAS_AF=0.0707;END=67135182;EUR_AF=0.0731;NS=2504;SAS_AF=0.0794;SVTYPE=DEL	GT	1
X	67141679	DEL_pindel_53834	CATATACACCATGGAAAACTATGCAGCCATAAAAAGAATGAGATCAGGCCCTTTGCAGGGACATGGATGAAGCTGGAAACCATAATTCTCAGCAAACTAACACAGG	C	.	PASS	AC=1199;AF=0.317616;AFR_AF=0.318;AMR_AF=0.3168;AN=3775;CS=DEL_pindel;EAS_AF=0.3089;END=67141784;EUR_AF=0.2977;NS=2504;SAS_AF=0.3482;SVTYPE=DEL	GT	1
X	67165589	DUP_gs.X_CNV_X_67165589_67192501	A	<CN0>,<CN2>	.	PASS	AC=0,9;AF=0,0.00238411;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=67192501;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0111;SVTYPE=DUP	GT	0
X	67175728	BI_GS_DEL1_B5_P2965_115	C	<CN0>	100	PASS	AC=32;AF=0.0781457;AFR_AF=0.0728;AMR_AF=0.0802;AN=2542;CIEND=-53,53;CIPOS=-53,53;CS=DEL_union;EAS_AF=0.0746;END=67176842;EUR_AF=0.0822;NS=2504;SAS_AF=0.0836;SVTYPE=DEL	GT	.
X	67187590	DUP_gs.X_CNV_X_67187590_67214120	A	<CN0>,<CN2>	.	PASS	AC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=67214120;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0042;SVTYPE=DUP	GT	0
X	67232268	BI_GS_DEL1_B3_P2965_11	G	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.006;AMR_AF=0;AN=2542;CIEND=-41,41;CIPOS=-41,41;CS=DEL_union;EAS_AF=0;END=67246232;EUR_AF=0.0052;MC=YL_CN_ASW_4564;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	67545427	ALU_umary_ALU_12678	T	<INS:ME:ALU>	.	PASS	AC=142;AF=0.0376159;AFR_AF=0.1366;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,4,250,-;NS=2504;SAS_AF=0;SVLEN=246;SVTYPE=ALU;TSD=null	GT	0
X	67578264	DUP_gs.X_CNV_X_67578264_67634990	G	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=67634990;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	67667912	BI_GS_DEL1_B3_P2965_24	T	<CN0>	100	PASS	AC=124;AF=0.157616;AFR_AF=0.1486;AMR_AF=0.1202;AN=2542;CIEND=-21,22;CIPOS=-21,22;CS=DEL_union;EAS_AF=0.2081;END=67670000;EUR_AF=0.1449;NS=2504;SAS_AF=0.1574;SVTYPE=DEL	GT	.
X	67736928	DEL_pindel_53841	TGCTGGGATTACAGGCATGAGCTACCGAACCCGACCAAATCACTCAGCAGCTGTTTTTGTTTGTTTGTTTGTTTGTTTTTGAGACGGAGTCTTGCACTGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAACCTCTGCCACCCGGGTTCAAGCAATTCCCATGCCTCAGCCTCCCAAGTA	T	.	PASS	AC=804;AF=0.21298;AFR_AF=0.1864;AMR_AF=0.2061;AN=3775;CS=DEL_pindel;EAS_AF=0.2225;END=67737119;EUR_AF=0.2245;NS=2504;SAS_AF=0.2326;SVTYPE=DEL	GT	1
X	67766474	DUP_gs.X_CNV_X_67766474_67772799	T	<CN0>,<CN2>	.	PASS	AC=0,7;AF=0,0.0018543;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0092;END=67772799;EUR_AF=0,0;MC=DUP_gs.X_CNV_X_67766825_67774077;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	67815297	DEL_pindel_53843	CTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTCTATTTCTTTCTTTCCTTTTTTTTTT	C	.	PASS	AC=1016;AF=0.269139;AFR_AF=0.2602;AMR_AF=0.2672;AN=3775;CS=DEL_pindel;EAS_AF=0.267;END=67815354;EUR_AF=0.248;NS=2504;SAS_AF=0.3078;SVTYPE=DEL	GT	1
X	67827481	DUP_gs.X_CNV_X_67827481_67876995	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=67876995;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	67841422	BI_GS_DEL1_B3_P2965_27	C	<CN0>	100	PASS	AC=14;AF=0.0188079;AFR_AF=0.0289;AMR_AF=0.0191;AN=2542;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0.0144;END=67843680;EUR_AF=0.0222;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	67875701	BI_GS_DEL1_B4_P2965_95	A	<CN0>	100	PASS	AC=18;AF=0.0466225;AFR_AF=0.0429;AMR_AF=0.0496;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0301;END=67877292;EUR_AF=0.0666;NS=2504;SAS_AF=0.046;SVTYPE=DEL	GT	.
X	67898559	BI_GS_DEL1_B3_P2965_30	G	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=-26,27;CIPOS=-26,27;CS=DEL_union;EAS_AF=0;END=67903078;EUR_AF=0.0065;MC=YL_CN_GWD_5869,EM_DL_DEL105252;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	67934875	DEL_pindel_53851	TCTTGGGCCTGCTATCTCCCATGGACCTGCCTTACTGACTGACAGAGTTCTTTGGGTCCAGCTCAGCCCTCTAGGC	T	.	PASS	AC=1156;AF=0.306225;AFR_AF=0.3031;AMR_AF=0.3034;AN=3775;CS=DEL_pindel;EAS_AF=0.2866;END=67934950;EUR_AF=0.2963;NS=2504;SAS_AF=0.344;SVTYPE=DEL	GT	1
X	68045255	DEL_pindel_53852	CACACACTCCTTTCCACAGCCTTGGTATATCAGTGTGGCCTAGTTTACATCCTGACTTTTCCACTTCCTGGCTGGGTGGCCTTAGGTGAGTTATTTCACCTCTCTGTGTCTCAGAGTGCAAGGCAGGCAGGGAGAAGTCAAGGACAAGGGCCACAGAAATAGAAAGGTGTGTGCATGTTCAT	C	.	PASS	AC=1219;AF=0.322914;AFR_AF=0.3071;AMR_AF=0.3607;AN=3775;CS=DEL_pindel;EAS_AF=0.3115;END=68045436;EUR_AF=0.3029;NS=2504;SAS_AF=0.351;SVTYPE=DEL	GT	1
X	68319997	UW_VH_13090	T	<CN0>	100	PASS	AC=13;AF=0.0312583;AFR_AF=0.0229;AMR_AF=0.0458;AN=2542;CIEND=0,253;CIPOS=-269,0;CS=DEL_union;EAS_AF=0.0249;END=68321839;EUR_AF=0.0418;NS=2504;SAS_AF=0.0279;SVTYPE=DEL	GT	.
X	68330681	L1_umary_LINE1_3069	A	<INS:ME:LINE1>	.	PASS	AC=7;AF=0.0018543;AFR_AF=0.007;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2724,5262,-;NS=2504;SAS_AF=0;SVLEN=2538;SVTYPE=LINE1;TSD=null	GT	0
X	68561459	EM_DL_DEL105263	T	<CN0>	100	PASS	AC=7;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0052;END=68565338;EUR_AF=0.0026;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	68807480	BI_GS_DEL1_B1_P2966_571	A	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.0013;END=68815695;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	68861391	L1_umary_LINE1_3070	T	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1886,5971,-;NS=2504;SAS_AF=0;SVLEN=4085;SVTYPE=LINE1;TSD=null	GT	0
X	68874026	BI_GS_DEL1_B3_P2966_25	A	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-46,47;CIPOS=-46,47;CS=DEL_union;EAS_AF=0;END=68885739;EUR_AF=0.0039;MC=YL_CN_ESN_4438;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	69003638	BI_GS_DEL1_B4_P2967_1	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0.0013;END=69020483;EUR_AF=0.0052;MC=YL_CN_CHB_4676;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	69011306	DUP_gs.X_CNV_X_69011306_69020131	C	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=69020131;EUR_AF=0,0.0013;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV	GT	0
X	69023049	UW_VH_5952	G	<CN0>	100	PASS	AC=27;AF=0.0127152;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=0,359;CIPOS=-369,0;CS=DEL_union;EAS_AF=0.0406;END=69026269;EUR_AF=0.0104;MC=BI_GS_DEL1_B5_P2967_14,YL_CN_CDX_3845,YL_CN_JPT_4725;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	69200591	DEL_pindel_53866	CCTCCCATCATCTCTGCACATGAAGTGGAAGTTACTCTCATTTTACATATAGACACAGATAACAACCTCAGATATGTTAAATAACTTGAGTAGAGTTACAGGTGGTGTGGAAAGATAAGAACAAAAATAAAGTCTTCCTTGTCTTATTTTGCCCCTCTGGGCAGGTGTTCATTTTGTCTTTTTGATGCTTCCAGTATCTGTGTTGACCTTTTCTTGCCTGAGCCTTGGGCAGGCTGGGCTTTCTGTAGAGCTACTTGACTGGAAGCTTTTTCTAGCCACAAGCATTCCACTGGGGTTGTGGGGGCATCTGCTCACTTTACTGTCTCTTGGTAGAAAAGCTTAAAGTGAATTTTTAAAGTGAAAGTTTAGAATCTTAGTAAAGCTATAAGACATAGACCCAACCCCAAACTGCTGTCTCAGTGGGGTTCATCTCTCTTTACCGCTAGATCCTTTTATGTCAGTAGGATAGGACCTTGGACATTATTGCCAGTGGTATACAGTATCACTATGGTATGACTGAAAGTTTGAGTACTATTTCTACACTCCTGTACCACAAAAGCAATCTCATACTATAGAAACAAACCTGTACTGTAGAATAGAAGAGAATTGAGCAGGAAATGTTTAGTTTGCATTGCAAACTTTTTTATTTTTTGTTTTTTTCTCACTTTTAGCATCTTGGGCTTCTATTCTGGGGATTAGAGATAGTAAGTAATTATAATATCAAGATGAGATGACAATATCATTCTTTTTCTGTTCCAAGTGAATGATGGCTCTTTGGCCCATAAGCTG	C	.	PASS	AC=521;AF=0.138013;AFR_AF=0.1286;AMR_AF=0.1679;AN=3775;CS=DEL_pindel;EAS_AF=0.1335;END=69201379;EUR_AF=0.1253;NS=2504;SAS_AF=0.1476;SVTYPE=DEL	GT	1
X	69239350	DEL_pindel_53867	CTATGCAGCACAGTAGACTGGATAAAGAAAATGTACATACATGTCATGGAATAA	C	.	PASS	AC=1168;AF=0.309404;AFR_AF=0.3151;AMR_AF=0.3015;AN=3775;CS=DEL_pindel;EAS_AF=0.2932;END=69239403;EUR_AF=0.2937;NS=2504;SAS_AF=0.3412;SVTYPE=DEL	GT	1
X	69303060	UW_VH_1933	C	<CN0>	100	PASS	AC=905;AF=0.49298;AFR_AF=0.321;AMR_AF=0.5115;AN=2542;CIEND=0,525;CIPOS=-473,0;CS=DEL_union;EAS_AF=0.6191;END=69303274;EUR_AF=0.5483;MC=BI_GS_DEL1_B4_P2967_32;NS=2504;SAS_AF=0.5265;SVTYPE=DEL	GT	.
X	69419904	DUP_gs.X_CNV_X_69419904_69448773	C	<CN0>,<CN2>	.	PASS	AC=0,7;AF=0,0.0018543;AFR_AF=0,0.007;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=69448773;EUR_AF=0,0;MC=DUP_gs.X_CNV_X_69419675_69458148;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	69427429	DUP_gs.X_CNV_X_69427429_69446696	A	<CN0>,<CN2>	.	PASS	AC=2,7;AF=0.0005298,0.0018543;AFR_AF=0,0.007;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=69446696;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV	GT	0
X	69438219	BI_GS_DEL1_B5_P2967_342	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0;END=69446728;EUR_AF=0.0039;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	69462122	DUP_gs.X_CNV_X_69462122_69470996	T	<CN0>,<CN2>	.	PASS	AC=0,12;AF=0,0.00317881;AFR_AF=0,0.005;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=69470996;EUR_AF=0,0.0091;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	69731357	BI_GS_DEL1_B1_P2967_446	C	<CN0>	100	PASS	AC=167;AF=0.0712583;AFR_AF=0.1027;AMR_AF=0.042;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0681;END=69734204;EUR_AF=0.0627;MC=YL_CN_YRI_5586,EM_DL_DEL105282,UW_VH_2640,YL_CN_STU_4605,UW_VH_13557,UW_VH_7835;NS=2504;SAS_AF=0.0613;SVTYPE=DEL	GT	.
X	69842811	DEL_pindel_53874	TATTTGGTCATTATTCAAAATTCCAATTGCTTCATCTTTTGTTTGGTTTGTTTGAATTCCCTTCTA	T	.	PASS	AC=655;AF=0.17351;AFR_AF=0.1346;AMR_AF=0.1889;AN=3775;CS=DEL_pindel;EAS_AF=0.199;END=69842876;EUR_AF=0.1945;NS=2504;SAS_AF=0.1671;SVTYPE=DEL	GT	0
X	70034916	BI_GS_DEL1_B4_P2968_4	C	<CN0>	100	PASS	AC=286;AF=0.244768;AFR_AF=0.2702;AMR_AF=0.2443;AN=2542;CIEND=-20,20;CIPOS=-20,20;CS=DEL_union;EAS_AF=0.2408;END=70036229;EUR_AF=0.1736;NS=2504;SAS_AF=0.2897;SVTYPE=DEL	GT	.
X	70102169	L1_umary_LINE1_3071	T	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,4792,-;NS=2504;SAS_AF=0.0028;SVLEN=4791;SVTYPE=LINE1;TSD=null	GT	0
X	70122996	BI_GS_DEL1_B2_P2968_45	A	<CN0>	100	PASS	AC=195;AF=0.130596;AFR_AF=0.0957;AMR_AF=0.0782;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1754;END=70123933;EUR_AF=0.077;MC=UW_VH_1657;NS=2504;SAS_AF=0.227;SVTYPE=DEL	GT	.
X	70137290	BI_GS_DEL1_B5_P2968_75	A	<CN0>	100	PASS	AC=443;AF=0.181987;AFR_AF=0.1844;AMR_AF=0.2137;AN=2542;CIEND=-31,32;CIPOS=-31,32;CS=DEL_union;EAS_AF=0.0223;END=70139954;EUR_AF=0.3916;MC=YL_CN_GWD_5871,YL_CN_MXL_3753,EM_DL_DEL105290,YL_CN_TSI_4407;NS=2504;SAS_AF=0.1017;SVTYPE=DEL	GT	.
X	70434539	DUP_gs.X_CNV_X_70434539_70438224	T	<CN0>,<CN2>	.	PASS	AC=0,8;AF=0,0.00211921;AFR_AF=0,0.003;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=70438224;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0056;SVTYPE=DUP	GT	0
X	70543854	BI_GS_DEL1_B4_P2968_56	C	<CN0>	100	PASS	AC=137;AF=0.15947;AFR_AF=0.1535;AMR_AF=0.1469;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.1688;END=70544799;EUR_AF=0.1384;NS=2504;SAS_AF=0.1894;SVTYPE=DEL	GT	.
X	71022532	DUP_gs.X_CNV_X_71022532_71050874	A	<CN0>,<CN2>	.	PASS	AC=4,4;AF=0.0010596,0.0010596;AFR_AF=0.004,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0052;END=71050874;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	71064563	DUP_gs.X_CNV_X_71064563_71157334	G	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=71157334;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	71312620	L1_umary_LINE1_3072	T	<INS:ME:LINE1>	.	PASS	AC=130;AF=0.0344371;AFR_AF=0.1246;AMR_AF=0.0095;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5596,5998,-;NS=2504;SAS_AF=0;SVLEN=402;SVTYPE=LINE1;TSD=AACTGCATTAATACTTCT	GT	0
X	71357156	BI_GS_DEL1_B4_P2969_56	G	<CN0>	100	PASS	AC=287;AF=0.289272;AFR_AF=0.2812;AMR_AF=0.2882;AN=2542;CIEND=-29,30;CIPOS=-29,30;CS=DEL_union;EAS_AF=0.2579;END=71357534;EUR_AF=0.2768;NS=2504;SAS_AF=0.3482;SVTYPE=DEL	GT	.
X	71408878	BI_GS_DEL1_B1_P2969_275	G	<CN0>	100	PASS	AC=26;AF=0.0103311;AFR_AF=0.0289;AMR_AF=0.0115;AN=2542;CIEND=-11,12;CIPOS=-11,12;CS=DEL_union;EAS_AF=0;END=71416241;EUR_AF=0.0052;MC=YL_CN_PUR_5681,UW_VH_6543;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	71430729	BI_GS_DEL1_B1_P2969_290	A	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0076;AN=2542;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0;END=71441329;EUR_AF=0.0039;MC=YL_CN_PUR_5682,UW_VH_9973;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	71860788	DEL_pindel_53890	CCATAAAATATAAATAATTGATAAATATATACAGAAATGTGCAGACCCTATTAGATAAGCAAGCAATTGTAGACACATAGTTTCAAAAAAAGAGGTAAAGCAAAAATAGAAAAACGTACAGGTCCCTGGGAATTAAAGATAGAAAATTAAAATAATTTATACATACTAAAACCTACTTATCTAACAAAAATAAATAAAACTCCAATGTTAGTGGGGTAGTAAAAAAGAAAGGTATATTTTATATCTTAGTTATGTCACTATGAATTAGTTCGTCTTTGTAAATAATCATCTGGCAACATGTAACAAGAGCTAAAAAGCTGTTCACAAGCTTATCCAGAATCCCTTTACTGAGAATATACAATTAAGAAAACAGTGGTCTATACAAAGGCATTTATAGAAGGATAAAAATTCTTGAAAATATTCAGCTAATAATCAGGAAACAATTACTTTGATTTGATGAAATACTATATAGCTATTTCAATATGTGGAAATGCATCACGAGAGAATAAGTGAAAACAAACAGAACACAAGTGAATATAGGCATGTTAAAGATAACTATTAAAATGTATCTATATGCACTAAGATTAGAAAAGAATTAGCATTACATAAAGATTTGAACTTAATATTTTAAGTTCTTACTTTCACAAAGTTGATTAATCT	C	.	PASS	AC=223;AF=0.0590728;AFR_AF=0.0658;AMR_AF=0.0935;AN=3775;CS=DEL_pindel;EAS_AF=0.0864;END=71861447;EUR_AF=0.0326;NS=2504;SAS_AF=0.0237;SVTYPE=DEL	GT	0
X	72238298	ALU_umary_ALU_12679	T	<INS:ME:ALU>	.	PASS	AC=64;AF=0.0169536;AFR_AF=0;AMR_AF=0.0153;AN=3775;CS=ALU_umary;EAS_AF=0.0733;EUR_AF=0;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	72297660	DUP_gs.X_CNV_X_72297660_72334425	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=72334425;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	72343223	L1_umary_LINE1_3073	T	<INS:ME:LINE1>	.	PASS	AC=16;AF=0.00423841;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0209;EUR_AF=0;MEINFO=LINE1,3249,5528,-;NS=2504;SAS_AF=0;SVLEN=2279;SVTYPE=LINE1;TSD=null	GT	0
X	72423763	DEL_pindel_53895	AAGAGAGAGAATGAGAACCAAGTGAAAAGGGAAATCCCTTATAAAACCATCAGATCTTG	A	.	PASS	AC=218;AF=0.0577483;AFR_AF=0.0349;AMR_AF=0.0744;AN=3775;CS=DEL_pindel;EAS_AF=0.1217;END=72423821;EUR_AF=0.0313;NS=2504;SAS_AF=0.0376;SVTYPE=DEL	GT	0
X	72581020	DEL_pindel_53897	TGTGTATATATATATATATATATATATATATATATATATATATATATATATTTATCACAATTTCTTCATCTAATCATTGATTGATGGGCATTTGGGCTGGTTCCATATTTTTGCAATTGCTAATTGTGCTGCTATAAACATTTGTGGAAAAGTATCTTTTTTGTATAATGACTTCTTTTCCGCTGGGTGGATATGTAGCAGTGAAGTTGCTGAATCAAATGGTAATTCTACTTTTAGTTCTTTAAGGAATCTCCACACTGTTTTCCATAGCGGTTTTACTAGTTTACATTCCCACCAGCATTGTAAATGTGTTCCCTTTTCTCCACATCCATGCCAATATCTATTATTTGTTTATTTCTTGATTATAGCCATTCTTGCAGGAATAAGGTGATATCACATTGTGGTTTTGATTTGCATTTCTCTGATAATTA	T	.	PASS	AC=853;AF=0.22596;AFR_AF=0.2124;AMR_AF=0.2004;AN=3775;CS=DEL_pindel;EAS_AF=0.2435;END=72581450;EUR_AF=0.2154;NS=2504;SAS_AF=0.2563;SVTYPE=DEL	GT	1
X	72848529	BI_GS_DEL1_B3_P2970_16	T	<CN0>	100	PASS	AC=9;AF=0.00291391;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=72856483;EUR_AF=0.0039;MC=YL_CN_LWK_4227;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	72992805	BI_GS_DEL1_B3_P2970_22	G	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=72998981;EUR_AF=0.0052;MC=YL_CN_BEB_3705;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	72997307	DEL_pindel_53899	GGTATTTCATATATCTACATTTCCTTGGGGTTGATTACTGGAGCTTTATTAGTCTCCTGTGGTGGTGTCATGTGTGCCTGATTTTTTTAAAATCCATGTAGCCTCATATTGATGTCTATACATTTGAATGCACAA	G	.	PASS	AC=99;AF=0.0262252;AFR_AF=0.011;AMR_AF=0.0439;AN=3775;CS=DEL_pindel;EAS_AF=0.0026;END=72997441;EUR_AF=0.064;NS=2504;SAS_AF=0.0195;SVTYPE=DEL	GT	0
X	73004974	DUP_gs.X_CNV_X_73004974_73094907	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=73094907;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	73022777	DEL_pindel_53900	AAGAGGAGAGATTAGGCTGGCTGTCCAATGGACACAGCTTTATTCTGGAATGGTGAGCCTAATAGGGAGGGT	A	.	PASS	AC=522;AF=0.138278;AFR_AF=0.1655;AMR_AF=0.1641;AN=3775;CS=DEL_pindel;EAS_AF=0.1479;END=73022848;EUR_AF=0.1188;NS=2504;SAS_AF=0.0919;SVTYPE=DEL	GT	1
X	73089711	BI_GS_DEL1_B3_P2971_4	T	<CN0>	100	PASS	AC=83;AF=0.125828;AFR_AF=0.1107;AMR_AF=0.126;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0.1479;END=73090785;EUR_AF=0.1292;NS=2504;SAS_AF=0.1198;SVTYPE=DEL	GT	.
X	73166080	BI_GS_DEL1_B4_P2971_15	T	<CN0>	100	PASS	AC=141;AF=0.0617219;AFR_AF=0.1755;AMR_AF=0.0324;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.0131;END=73169831;EUR_AF=0.0235;MC=YL_CN_BEB_3706,UW_VH_10562,YL_CN_GIH_3449,UW_VH_24532;NS=2504;SAS_AF=0.0167;SVTYPE=DEL	GT	.
X	73172802	EM_DL_DEL105335	A	<CN0>	100	PASS	AC=30;AF=0.00980132;AFR_AF=0.003;AMR_AF=0.0496;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0039;END=73176731;EUR_AF=0.0065;MC=UW_VH_9769,YL_CN_MXL_3755;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	73194117	UW_VH_6036	T	<CN0>	100	PASS	AC=16;AF=0.0148344;AFR_AF=0.0169;AMR_AF=0.0057;AN=2542;CIEND=0,266;CIPOS=-281,0;CS=DEL_union;EAS_AF=0.0327;END=73196661;EUR_AF=0.0091;MC=YL_CN_CHS_4742,BI_GS_DEL1_B1_P2971_114;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	73400777	DEL_pindel_53907	AGGAACCGAGGGTGGCCCACTATAGGCCCGGTCCCTCCGGTACGAGCCATGAGTCAGCTGAGCCTGAGTGCAAAGATGGACAGAAGGCCGACTGG	A	.	PASS	AC=893;AF=0.236556;AFR_AF=0.2173;AMR_AF=0.229;AN=3775;CS=DEL_pindel;EAS_AF=0.2565;END=73400871;EUR_AF=0.2141;NS=2504;SAS_AF=0.2716;SVTYPE=DEL	GT	1
X	73426252	DEL_pindel_53909	CATTTTTTCTACAGGTTATGATAGAATCTCATTAAATCTTGACATCTCTCCCAGGGGAAGAATATCACAGGCCAGTGGTGTGAATGGGGTATGAGATGATAGCATTTACTAAATCGGTAATCTCTTTTATGTATGTTCTTGTTATATTGAGGTTAAGAGGCAAGATGATTGGCAGCAGAATTCTTCAGGATTTTGTTTGCTGTGGTATGGATTAT	C	.	PASS	AC=302;AF=0.08;AFR_AF=0.0678;AMR_AF=0.0458;AN=3775;CS=DEL_pindel;EAS_AF=0.1165;END=73426466;EUR_AF=0.0862;NS=2504;SAS_AF=0.0766;SVTYPE=DEL	GT	0
X	73496220	DEL_pindel_53911	TGTTGTTGATTTTGAAACAGAGTTTCCCTCTGTCACCCAGACTGGAGTGTAATGGCACGATCTCAGCTCCCAGGCTCAAGTGATTCTCCTACTTCAGCCTCCTGAGTAGCTGCAATTACAGGCATGAGCCACCCTGTTCCACTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCATCACGTTGGCCAGGCTGCTCTCGAACTCCTGACCTCCCGCCTCAGCCTCCCAAAGTGCTGGGATTAGAGGCGTGAGCCATCAGGCCTGGCCAACAACAAACTCTTTACATGCATAAACATAATAAATATGTTAAAAAAGAGAGGAGAGAAACCTACTGTGTGTACCCCATGCTCTAGATAAATGCCATACA	T	.	PASS	AC=215;AF=0.0569536;AFR_AF=0.0568;AMR_AF=0.0382;AN=3775;CS=DEL_pindel;EAS_AF=0.0903;END=73496586;EUR_AF=0.0339;NS=2504;SAS_AF=0.0599;SVTYPE=DEL	GT	1
X	73516948	UW_VH_8149	A	<CN0>	100	PASS	AC=21;AF=0.0349669;AFR_AF=0.0309;AMR_AF=0.0324;AN=2542;CIEND=0,310;CIPOS=-271,0;CS=DEL_union;EAS_AF=0.0353;END=73518402;EUR_AF=0.0457;MC=BI_GS_DEL1_B5_P2971_386;NS=2504;SAS_AF=0.0306;SVTYPE=DEL	GT	.
X	73550319	DEL_pindel_53912	GTGCGACTGTAGTCCCAGCTACTTGGGAGACTGAGACAGGAGAATTGCTTGAACCCAGGAGGCGGAAGT	G	.	PASS	AC=2146;AF=0.568477;AFR_AF=0.4975;AMR_AF=0.4542;AN=3775;CS=DEL_pindel;EAS_AF=0.9241;END=73550387;EUR_AF=0.376;NS=2504;SAS_AF=0.578;SVTYPE=DEL	GT	1
X	73816785	BI_GS_DEL1_B2_P2971_372	T	<CN0>	100	PASS	AC=74;AF=0.130331;AFR_AF=0.1276;AMR_AF=0.1508;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.1217;END=73817680;EUR_AF=0.1332;NS=2504;SAS_AF=0.1253;SVTYPE=DEL	GT	.
X	74154573	DEL_pindel_53919	AGTATAGCCTCATTATCAGCAAACATGCTGGATGGGCTTTGAATTGCGTACTTGTTCTTCTGAACACTTGCTTCT	A	.	PASS	AC=229;AF=0.0606623;AFR_AF=0.0289;AMR_AF=0.0954;AN=3775;CS=DEL_pindel;EAS_AF=0.0563;END=74154647;EUR_AF=0.094;NS=2504;SAS_AF=0.0487;SVTYPE=DEL	GT	0
X	74216946	ALU_umary_ALU_12680	T	<INS:ME:ALU>	.	PASS	AC=230;AF=0.0609271;AFR_AF=0.2154;AMR_AF=0.0267;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=GCTTTTCTAGTTCTTTT	GT	0
X	74249631	DEL_pindel_53921	ATACCATCTCAGACCACTCAGAATGGCTATTACTAAAAAGTCAAAAACCAATAGATGCTGGCAAGGCTTGAGAGAAAAGGTAGGTTCTTTCTATCCCCAGTTTTTTCAGAGTGATTTTTCTTTTG	A	.	PASS	AC=662;AF=0.175364;AFR_AF=0.1765;AMR_AF=0.1832;AN=3775;CS=DEL_pindel;EAS_AF=0.2107;END=74249755;EUR_AF=0.1645;NS=2504;SAS_AF=0.1421;SVTYPE=DEL	GT	0
X	74360376	ALU_umary_ALU_12681	T	<INS:ME:ALU>	.	PASS	AC=86;AF=0.0227815;AFR_AF=0.0818;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,6,281,-;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=AAGAGATCTTT	GT	0
X	74457229	DUP_gs.X_CNV_X_74457229_74485658	T	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=74485658;EUR_AF=0,0.0039;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	74464226	DEL_pindel_53922	TTCTTTACAGAAATAGAAGAAACTATTTTAAGTTTCATATGGAACTGAAAAAGAGCCAGAGTACCCAAGGCAATCTTAAGCAAAAAGAAAAAAGGCATCACATTACCTGACTTCAAACTATACTAAAAGGCTACAGTAACCAAAATAGCATGATACTGATAC	T	.	PASS	AC=558;AF=0.147815;AFR_AF=0.1356;AMR_AF=0.1603;AN=3775;CS=DEL_pindel;EAS_AF=0.1518;END=74464387;EUR_AF=0.1554;NS=2504;SAS_AF=0.1435;SVTYPE=DEL	GT	1
X	74480626	DUP_gs.X_CNV_X_74480626_74530298	A	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=74530298;EUR_AF=0,0.0039;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	74599737	DEL_pindel_53924	CAGTCAGTGTGAGTTATCCTTGCCACAGAAGGCTGCAAGCTCTCATGCCACTGAGTTAAACAGG	C	.	PASS	AC=2329;AF=0.616954;AFR_AF=0.4975;AMR_AF=0.6641;AN=3775;CS=DEL_pindel;EAS_AF=0.6911;END=74599800;EUR_AF=0.6919;NS=2504;SAS_AF=0.5905;SVTYPE=DEL	GT	0
X	74885259	ALU_umary_ALU_12682	C	<INS:ME:ALU>	.	PASS	AC=34;AF=0.00900662;AFR_AF=0.0319;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,8,272,+;NS=2504;SAS_AF=0;SVLEN=264;SVTYPE=ALU;TSD=null	GT	0
X	74889445	DUP_gs.X_CNV_X_74889445_74904218	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=74904218;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	75111521	DEL_pindel_53930	GATAGAAAGAATATGGTTAGATGTGGTGGCTCACCCCTGTAATCCCAAAACTTTGGGAGGCCA	G	.	PASS	AC=1123;AF=0.297483;AFR_AF=0.2911;AMR_AF=0.2939;AN=3775;CS=DEL_pindel;EAS_AF=0.2945;END=75111583;EUR_AF=0.2872;NS=2504;SAS_AF=0.3231;SVTYPE=DEL	GT	1
X	75212778	DUP_gs.X_CNV_X_75212778_75222868	C	<CN0>,<CN2>	.	PASS	AC=4,3;AF=0.0010596,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75222868;EUR_AF=0,0.0026;NS=2504;SAS_AF=0.0056,0;SVTYPE=CNV	GT	2
X	75277077	YL_CN_TSI_4409	A	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=75366938;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	75301385	DUP_gs.X_CNV_X_75301385_75313459	A	<CN0>,<CN2>	.	PASS	AC=1,11;AF=0.0002649,0.00291391;AFR_AF=0,0.011;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75313459;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	75316532	DEL_pindel_53931	TTGGCTTTTATGGTGTTGAAGTAATTTCCTTCTATTTTTAGTCTGTTGAATGTTTCTATCATAAAAACTGTTAAATTTTGTCAAATCCATATCAAAATCCCAAAGACATGTTTTGCACACACACACAAAAATCTTAAAATTTATATAAAACCACAAAAGAGTGAAGAGCCAAAAGACCCTTAAGAAAGAACAAACTTGGAAGCCTCACAATTCCTAATTTCAACACATATTACAAAACTACAGTAATCAAAACATTGCAGTACTGGCATAAAAATGGACACATGAATCAA	T	.	PASS	AC=456;AF=0.120795;AFR_AF=0.1186;AMR_AF=0.0725;AN=3775;CS=DEL_pindel;EAS_AF=0.1283;END=75316821;EUR_AF=0.141;NS=2504;SAS_AF=0.1295;SVTYPE=DEL	GT	1
X	75328210	DUP_gs.X_CNV_X_75328210_75344469	G	<CN0>,<CN2>	.	PASS	AC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75344469;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	75345754	DUP_gs.X_CNV_X_75345754_75482545	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75482545;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	75418334	DEL_pindel_53933	TAAATTTATTGTAGATTCTGGACATTAGTTTTCTGTCAGATGTATAGATTGCA	T	.	PASS	AC=767;AF=0.203179;AFR_AF=0.1934;AMR_AF=0.2004;AN=3775;CS=DEL_pindel;EAS_AF=0.2147;END=75418386;EUR_AF=0.1854;NS=2504;SAS_AF=0.2256;SVTYPE=DEL	GT	0
X	75493658	DUP_gs.X_CNV_X_75493658_75515099	G	<CN0>,<CN2>	.	PASS	AC=18,1;AF=0.00476821,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75515099;EUR_AF=0,0;NS=2504;SAS_AF=0.0251,0;SVTYPE=CNV	GT	0
X	75493696	BI_GS_DEL1_B5_P2973_337	C	<CN0>	100	PASS	AC=22;AF=0.00741722;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-23,23;CIPOS=-23,23;CS=DEL_union;EAS_AF=0.0013;END=75514939;EUR_AF=0.0065;MC=YL_CN_STU_4610;NS=2504;SAS_AF=0.0265;SVTYPE=DEL	GT	.
X	75504175	DEL_pindel_53934	GGAGATTGCTGTAAGTAGTAAGGACATTTTAAAAATATTGAATCTTCCATTCCATAAACATGAAATGTATTTCTATTTTTTATGTTCCTTTCAATTTCTTTCATCAGTGTTTGATAGTTCTTATTATA	G	.	PASS	AC=600;AF=0.15894;AFR_AF=0.1715;AMR_AF=0.1775;AN=3775;CS=DEL_pindel;EAS_AF=0.1571;END=75504302;EUR_AF=0.1632;NS=2504;SAS_AF=0.1253;SVTYPE=DEL	GT	0
X	75777695	DEL_pindel_53937	ATGTTTGCAGCTCGATCTTTCAGGCTGTTCTTTGTTGTTAGAAAAAAAAAATTTTCTGAGCTGCTTTTAGCTAGAAGGGAAGTTCTGCTGAATACTCATTTGCCCTCACTATC	A	.	PASS	AC=190;AF=0.0503311;AFR_AF=0.0309;AMR_AF=0.0725;AN=3775;CS=DEL_pindel;EAS_AF=0.0694;END=75777807;EUR_AF=0.0587;NS=2504;SAS_AF=0.032;SVTYPE=DEL	GT	0
X	75801323	DUP_gs.X_CNV_X_75801323_75841719	A	<CN0>,<CN2>	.	PASS	AC=4,1;AF=0.0010596,0.0002649;AFR_AF=0.003,0;AMR_AF=0.0019,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75841719;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	75803073	BI_GS_DEL1_B3_P2973_18	T	<CN0>	100	PASS	AC=6;AF=0.00291391;AFR_AF=0.006;AMR_AF=0.0038;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0;END=75842039;EUR_AF=0.0039;MC=YL_CN_GWD_5877;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	75821429	BI_GS_DEL1_B5_P2973_553	G	<CN0>	100	PASS	AC=7;AF=0.00609272;AFR_AF=0.011;AMR_AF=0.0057;AN=2542;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0.0013;END=75824703;EUR_AF=0.0065;MC=YL_CN_ASW_4571;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	76004940	YL_CN_CHB_4682	A	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=76120864;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	76030109	DEL_pindel_53942	CAAAAACTATAAGAAGAGACAAAGAAAGTCATGATGTAATAATAAAGGGGTCAATTCCACAAGAGGATATGACAATTTTAAATATATATGCACCCAATATTGGAGCACCCAAATATATGTAAGAAATATTATGACAGCTAAAGAAAGAGAGAGACTCCAATGCAATAATGGCTGGAG	C	.	PASS	AC=1464;AF=0.387815;AFR_AF=0.4247;AMR_AF=0.3492;AN=3775;CS=DEL_pindel;EAS_AF=0.3338;END=76030285;EUR_AF=0.406;NS=2504;SAS_AF=0.4025;SVTYPE=DEL	GT	1
X	76090768	YL_CN_STU_4611	A	<CN0>	100	PASS	AC=9;AF=0.00503311;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0052;END=76094679;EUR_AF=0.0052;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	76123370	YL_CN_CHS_4744	A	<CN0>	100	PASS	AC=11;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=76145606;EUR_AF=0.0104;MC=EM_DL_DEL105369,BI_GS_DEL1_B2_P2974_61,YL_CN_FIN_4313;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	76170971	DEL_pindel_53943	CAGCCCATGGAGCAGCACGGGGAATTGCCTCACCAAGAAGTGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGTAGCCGTGACAGATGGTACCTGGAAAATCGGGAAACTCCCACCTTAATACTGTGCTTTTCCAATAGTCTTAGCAAATGGCACACCAGGAGATTATATCCTGAGCATGGTTCAGAGTGACCCACACCCATGGAGTCTCACTCACTGCTAGCACAGCAGTCTGAGATCGAACTGCAAGGTGCAGCAAGGCTGGTGGAGGGGAGTCCACCATTGCTGAGGCTTAAGTAGGTAAACAAAGAGGCCAGGAAGCTTGAACTGGGTGG	C	.	PASS	AC=243;AF=0.0643709;AFR_AF=0.0648;AMR_AF=0.0573;AN=3775;CS=DEL_pindel;EAS_AF=0.0471;END=76171308;EUR_AF=0.0875;NS=2504;SAS_AF=0.0627;SVTYPE=DEL	GT	1
X	76195189	L1_umary_LINE1_3074	A	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,1417,5627,+;NS=2504;SAS_AF=0;SVLEN=4210;SVTYPE=LINE1;TSD=AAAA	GT	0
X	76539575	DEL_pindel_53944	TCCTAGTCAAAGAAAGGCGTGACAGACAGCACCTGGAAAATTGGGTCACTCCTACCTTAATACTGCACTTTTCCAATGG	T	.	PASS	AC=4;AF=0.0010596;AFR_AF=0.002;AMR_AF=0.0038;AN=3775;CS=DEL_pindel;EAS_AF=0;END=76539653;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0
X	76574661	ALU_umary_ALU_12683	C	<INS:ME:ALU>	.	PASS	AC=1781;AF=0.471788;AFR_AF=0.325;AMR_AF=0.5153;AN=3775;CS=ALU_umary;EAS_AF=0.2238;EUR_AF=0.765;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.5961;SVLEN=279;SVTYPE=ALU;TSD=AAAAAAACAAACACTGC	GT	1
X	76764888	BI_GS_DEL1_B4_P2974_100	C	<CN0>	100	PASS	AC=4;AF=0.0015894;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-57,57;CIPOS=-57,57;CS=DEL_union;EAS_AF=0;END=76769437;EUR_AF=0.0026;MC=YL_CN_STU_4612;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	76845417	YL_CN_TSI_4410	A	<CN0>	100	PASS	AC=11;AF=0.0140397;AFR_AF=0.016;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0118;END=76849135;EUR_AF=0.0235;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	76863558	BI_GS_DEL1_B1_P2974_425	A	<CN0>	100	PASS	AC=5;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-25,25;CIPOS=-25,25;CS=DEL_union;EAS_AF=0.0026;END=76867044;EUR_AF=0.0052;MC=YL_CN_GBR_4534;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	76881496	DEL_pindel_53951	CATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	C	.	PASS	AC=1059;AF=0.28053;AFR_AF=0.2612;AMR_AF=0.3225;AN=3775;CS=DEL_pindel;EAS_AF=0.25;END=76881558;EUR_AF=0.2715;NS=2504;SAS_AF=0.3189;SVTYPE=DEL	GT	0
X	77013644	UW_VH_25191	T	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,255;CIPOS=-78,0;CS=DEL_union;EAS_AF=0.0013;END=77029895;EUR_AF=0.0039;MC=YL_CN_ITU_4707;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	77055184	DUP_gs.X_CNV_X_77055184_77085679	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=77085679;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	77121360	UW_VH_1301	A	<CN0>	100	PASS	AC=1135;AF=0.443974;AFR_AF=0.0508;AMR_AF=0.6145;AN=2542;CIEND=0,432;CIPOS=-546,0;CS=DEL_union;EAS_AF=0.5183;END=77123888;EUR_AF=0.6919;MC=EM_DL_DEL105387,BI_GS_DEL1_B1_P2975_52,YL_CN_ITU_4708;NS=2504;SAS_AF=0.5251;SVTYPE=DEL	GT	.
X	77515999	BI_GS_DEL1_B1_P2975_253	G	<CN0>	100	PASS	AC=94;AF=0.0415894;AFR_AF=0.1147;AMR_AF=0.021;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.0013;END=77524077;EUR_AF=0.017;MC=YL_CN_TSI_4412,UW_VH_2806;NS=2504;SAS_AF=0.0237;SVTYPE=DEL	GT	.
X	77696852	DEL_pindel_53962	ATTCTTTTTTTTTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAG	A	.	PASS	AC=2348;AF=0.621987;AFR_AF=0.6869;AMR_AF=0.6622;AN=3775;CS=DEL_pindel;EAS_AF=0.5668;END=77697450;EUR_AF=0.6188;MEINFO=LINE1,5415,6009,-;NS=2504;SAS_AF=0.5641;SVTYPE=DEL_LINE1	GT	1
X	77757016	DEL_pindel_53963	TGCCTTGAAGGAATGAACCTAGTCCTGGAAGAATTCATCACCTGCTAGCTGAAGAGCCTTTGGCCCCTGAATAGCCAGTAGCAATATCCA	T	.	PASS	AC=928;AF=0.245828;AFR_AF=0.2273;AMR_AF=0.2557;AN=3775;CS=DEL_pindel;EAS_AF=0.2343;END=77757105;EUR_AF=0.248;NS=2504;SAS_AF=0.2744;SVTYPE=DEL	GT	1
X	77906416	UW_VH_11792	C	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,195;CIPOS=-206,0;CS=DEL_union;EAS_AF=0.0026;END=77910911;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	77912083	DEL_pindel_53968	AGTGCGGGTACTCCATTCTATGTTTGGGTCATGTGTCTCAAGCCAATGGATTCCAATAATCAGAGGGTATCGTG	A	.	PASS	AC=605;AF=0.160265;AFR_AF=0.1256;AMR_AF=0.1908;AN=3775;CS=DEL_pindel;EAS_AF=0.1675;END=77912156;EUR_AF=0.1593;NS=2504;SAS_AF=0.1797;SVTYPE=DEL	GT	1
X	77922691	DEL_pindel_53969	TCAGGTGATCTTCTCTTTTAATGTTTCCTAGAGCTTTTGAATGTATGTTTTCTTAACACTGTAATCCTGGCTGTGATTTCCCTCATGTTCAGAATGATTAAATTTTCCTTCACCTTTGAGTCAGGTATTAAACAGGCATAGATGTCCCATGCTAACCCCAGCATGGACCTCTTGGTTTAGCTCTTTTATCTCAATCTCTTCCTGTAGAATATTTACATAACCAAATTCCATTTCCC	T	.	PASS	AC=214;AF=0.0566887;AFR_AF=0.0279;AMR_AF=0.042;AN=3775;CS=DEL_pindel;EAS_AF=0.0877;END=77922926;EUR_AF=0.0757;NS=2504;SAS_AF=0.0543;SVTYPE=DEL	GT	0
X	77959041	DEL_pindel_53971	GTCAACATAGCTGAGATATATATATATATATATATATATATATATATATATATATATA	G	.	PASS	AC=1289;AF=0.341457;AFR_AF=0.4566;AMR_AF=0.334;AN=3775;CS=DEL_pindel;EAS_AF=0.2814;END=77959098;EUR_AF=0.295;NS=2504;SAS_AF=0.2994;SVTYPE=DEL	GT	0
X	78024911	BI_GS_DEL1_B3_P2976_3	T	<CN0>	100	PASS	AC=291;AF=0.288742;AFR_AF=0.2712;AMR_AF=0.2634;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.288;END=78025278;EUR_AF=0.2794;NS=2504;SAS_AF=0.3426;SVTYPE=DEL	GT	.
X	78047643	ALU_umary_ALU_12685	T	<INS:ME:ALU>	.	PASS	AC=28;AF=0.00741722;AFR_AF=0.0239;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,278,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=GCACCAAAGCTTTTT	GT	0
X	78151926	BI_GS_DEL1_B5_P2976_132	A	<CN0>	100	PASS	AC=6;AF=0.0196027;AFR_AF=0.013;AMR_AF=0.0248;AN=2542;CIEND=-40,40;CIPOS=-40,40;CS=DEL_union;EAS_AF=0.0118;END=78153773;EUR_AF=0.0235;NS=2504;SAS_AF=0.0292;SVTYPE=DEL	GT	.
X	78192990	BI_GS_DEL1_B2_P2976_101	G	<CN0>	100	PASS	AC=390;AF=0.344901;AFR_AF=0.324;AMR_AF=0.3397;AN=2542;CIEND=-18,19;CIPOS=-18,19;CS=DEL_union;EAS_AF=0.322;END=78193423;EUR_AF=0.3499;NS=2504;SAS_AF=0.3969;SVTYPE=DEL	GT	.
X	78259192	ALU_umary_ALU_12686	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,31,280,-;NS=2504;SAS_AF=0;SVLEN=249;SVTYPE=ALU;TSD=null	GT	0
X	78415647	ALU_umary_ALU_12687	T	<INS:ME:ALU>	.	PASS	AC=76;AF=0.0201325;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluYc2,1,281,-;NS=2504;SAS_AF=0.1017;SVLEN=280;SVTYPE=ALU;TSD=CAAGAAAAATGAGTCTTT	GT	0
X	78467635	DEL_pindel_53974	GAGGACCCAAGCCCTACCCATACCAAGCCTTTCCCTTAGAGCTCTTGCAGCCACCTATGAAATTAAAAAGGAAGTAAGCCAGTGTCA	G	.	PASS	AC=314;AF=0.0831788;AFR_AF=0.0518;AMR_AF=0.124;AN=3775;CS=DEL_pindel;EAS_AF=0.0707;END=78467721;EUR_AF=0.0927;NS=2504;SAS_AF=0.1003;SVTYPE=DEL	GT	0
X	78534143	ALU_umary_ALU_12688	T	<INS:ME:ALU>	.	PASS	AC=50;AF=0.013245;AFR_AF=0.0449;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,6,281,+;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=null	GT	0
X	78590426	DEL_pindel_53975	GCTTCTACTGATCCTGTTACACAGCTAGTAAGCATAAATAGCATATTTTTCAGCCCTTGCTCCCCTCCTTCT	G	.	PASS	AC=1383;AF=0.366358;AFR_AF=0.3918;AMR_AF=0.3321;AN=3775;CS=DEL_pindel;EAS_AF=0.3168;END=78590497;EUR_AF=0.3316;NS=2504;SAS_AF=0.4457;SVTYPE=DEL	GT	1
X	78724855	DEL_pindel_53979	GACATTACCCCACTTTAAAGTATACAACAAGGCTATAGTTACCAAAACAACATGGT	G	.	PASS	AC=1433;AF=0.379603;AFR_AF=0.3729;AMR_AF=0.3378;AN=3775;CS=DEL_pindel;EAS_AF=0.3586;END=78724910;EUR_AF=0.3473;NS=2504;SAS_AF=0.4763;SVTYPE=DEL	GT	0
X	78738314	BI_GS_DEL1_B2_P2976_380	T	<CN0>	100	PASS	AC=159;AF=0.193907;AFR_AF=0.2094;AMR_AF=0.1794;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.1728;END=78738921;EUR_AF=0.1775;NS=2504;SAS_AF=0.2228;SVTYPE=DEL	GT	.
X	78863969	DUP_gs.X_CNV_X_78863969_78921419	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=78921419;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	78921957	BI_GS_DEL1_B1_P2976_547	C	<CN0>	100	PASS	AC=1038;AF=0.409801;AFR_AF=0.1196;AMR_AF=0.3244;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5183;END=78926007;EUR_AF=0.5496;MC=YL_CN_MSL_4057,EM_DL_DEL105599;NS=2504;SAS_AF=0.6128;SVTYPE=DEL	GT	.
X	78927122	DUP_gs.X_CNV_X_78927122_78946894	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=78946894;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	78946447	UW_VH_1658	T	<CN0>	100	PASS	AC=471;AF=0.18596;AFR_AF=0.0947;AMR_AF=0.3989;AN=2542;CIEND=0,405;CIPOS=-434,0;CS=DEL_union;EAS_AF=0.2251;END=78948827;EUR_AF=0.2037;MC=YL_CN_MXL_3759,YL_CN_PEL_4356,EM_DL_DEL105850,BI_GS_DEL1_B5_P2976_743,YL_CN_ASW_4575,YL_CN_GIH_3455;NS=2504;SAS_AF=0.0975;SVTYPE=DEL	GT	.
X	78979090	UW_VH_21526	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,185;CIPOS=-123,0;CS=DEL_union;EAS_AF=0.0013;END=78989060;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	78997248	DUP_gs.X_CNV_X_78997248_79021023	A	<CN0>,<CN2>	.	PASS	AC=1,4;AF=0.0002649,0.0010596;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=79021023;EUR_AF=0,0.0052;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	79004398	BI_GS_DEL1_B5_P2977_6	T	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.007;AMR_AF=0;AN=2542;CIEND=-18,19;CIPOS=-18,19;CS=DEL_union;EAS_AF=0;END=79008984;EUR_AF=0.0026;MC=YL_CN_YRI_5599;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	79100775	EM_DL_DEL105857	A	<CN0>	100	PASS	AC=13;AF=0.00397351;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0;END=79104606;EUR_AF=0.0157;MC=YL_CN_CEU_5443;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	79120207	DEL_pindel_53986	GCTGTCTTGTACTAAATGTACCTCCGTAGCCACCCAGGCAGGAAAGGTTCACCATCCCCTCTCAATTGCTTCTTTTTT	G	.	PASS	AC=1437;AF=0.380662;AFR_AF=0.5254;AMR_AF=0.3359;AN=3775;CS=DEL_pindel;EAS_AF=0.3102;END=79120284;EUR_AF=0.3107;NS=2504;SAS_AF=0.3607;SVTYPE=DEL	GT	1
X	79207268	DEL_pindel_53989	AGACATAGAACAATAAGACATAAAGAGAAACAACAAAATGTTAAAGAAGAGGGCACGAAGATAAAGTGTAGCTTCTATTT	A	.	PASS	AC=961;AF=0.25457;AFR_AF=0.2473;AMR_AF=0.2385;AN=3775;CS=DEL_pindel;EAS_AF=0.2565;END=79207347;EUR_AF=0.2493;NS=2504;SAS_AF=0.2799;SVTYPE=DEL	GT	1
X	79222117	DEL_pindel_53990	CCAACTTCACTTCTTCTGAGTCTCTTACATTTATTATACCACTCTGCAAGCCTTTTTGTACCCAGAGAGCTTACTTACCTCCTACTTGTGAGAACATGTAACATTTGGTTTCACCTTTTTAGTTACTTCACTTAGAATAATGGTTTAAAGCTACTTCCAATTTGCTATAAAAGA	C	.	PASS	AC=1683;AF=0.445828;AFR_AF=0.3888;AMR_AF=0.4714;AN=3775;CS=DEL_pindel;EAS_AF=0.4712;END=79222290;EUR_AF=0.4399;NS=2504;SAS_AF=0.4861;SVTYPE=DEL	GT	1
X	79238236	DEL_pindel_53991	TGAACAATTACAACAACTTGGTCTCCATTGAGTTATGGTGAGTGAAAAAAAAAGCCAATCCTCAAA	T	.	PASS	AC=1754;AF=0.464636;AFR_AF=0.3988;AMR_AF=0.4752;AN=3775;CS=DEL_pindel;EAS_AF=0.4961;END=79238301;EUR_AF=0.4804;NS=2504;SAS_AF=0.4986;SVTYPE=DEL	GT	1
X	79263134	DUP_gs.X_CNV_X_79263134_79303934	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=79303934;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	79315102	BI_GS_DEL1_B3_P2977_16	T	<CN0>	100	PASS	AC=25;AF=0.0678146;AFR_AF=0.0798;AMR_AF=0.0687;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.0458;END=79316246;EUR_AF=0.0653;NS=2504;SAS_AF=0.0766;SVTYPE=DEL	GT	.
X	79316070	BI_GS_DEL1_B4_P2977_37	A	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.0013;END=79324583;EUR_AF=0.0052;MC=UW_VH_19870;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	79318102	DUP_gs.X_CNV_X_79318102_79325578	A	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=79325578;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	79332230	UW_VH_5955	T	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,164;CIPOS=-218,0;CS=DEL_union;EAS_AF=0.0026;END=79336825;EUR_AF=0.0052;MC=BI_GS_DEL1_B1_P2977_193,YL_CN_CHS_4748;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	79365292	UW_VH_6363	A	<CN0>	100	PASS	AC=5;AF=0.0137748;AFR_AF=0.01;AMR_AF=0.0115;AN=2542;CIEND=0,199;CIPOS=-187,0;CS=DEL_union;EAS_AF=0.0157;END=79367452;EUR_AF=0.0261;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	79484828	L1_umary_LINE1_3075	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,9,6019,-;NS=2504;SAS_AF=0;SVLEN=6010;SVTYPE=LINE1;TSD=null	GT	0
X	79550979	BI_GS_DEL1_B4_P2977_61	A	<CN0>	100	PASS	AC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-31,32;CIPOS=-31,32;CS=DEL_union;EAS_AF=0;END=79561187;EUR_AF=0.0039;MC=YL_CN_STU_4617;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	79571266	ALU_umary_ALU_12689	T	<INS:ME:ALU>	.	PASS	AC=38;AF=0.0100662;AFR_AF=0.0359;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CTTATTTTGTTTT	GT	0
X	79735785	YL_CN_GWD_5883	A	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=79769230;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	79762384	BI_GS_DEL1_B4_P2977_86	T	<CN0>	100	PASS	AC=5;AF=0.00715232;AFR_AF=0.01;AMR_AF=0.0095;AN=2542;CIEND=-32,33;CIPOS=-32,33;CS=DEL_union;EAS_AF=0.0052;END=79765443;EUR_AF=0.0065;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	79846845	DEL_pindel_53998	TGGGGGCGTCAGCCCCCCGCCCGGCCAGCCACCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTG	T	.	PASS	AC=983;AF=0.260397;AFR_AF=0.2652;AMR_AF=0.2385;AN=3775;CS=DEL_pindel;EAS_AF=0.212;END=79846973;EUR_AF=0.3068;NS=2504;SAS_AF=0.2716;SVTYPE=DEL	GT	0
X	79926527	DUP_gs.X_CNV_X_79926527_79971253	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=79971253;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	79969280	SVA_umary_SVA_839	T	<INS:ME:SVA>	.	PASS	AC=14;AF=0.00370861;AFR_AF=0.014;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,87,1627,-;NS=2504;SAS_AF=0;SVLEN=1540;SVTYPE=SVA;TSD=null	GT	0
X	79981486	DEL_pindel_54000	ATATAACATAACATGTTTACATGTTATATGTCTATATAACATATAACATGTTTACATGTTATGTCTATATAACACAACATGTTTACATGTTGTCTGTATAACAACATGTTTACATGTTATGTGTCTGTATAACATATAACACGTTTACATATGTCTGTATAACATATAACACGTTTACATGTTATATGTCTGTATAACATATAACACGTTTACATGTTATATGTCTGTATAACATATAACACGTTTACATGTTATATGTCTGTATAACATATAACACGTTTACATGTTATGTCTGTATAACATATAACACGTTTACATGTTATGTCTGTATAACATATAACATGTTTACATGTTATGTCTGTATAACATATAACATGTTTACATGTTATATCTG	A	.	PASS	AC=1795;AF=0.475497;AFR_AF=0.5125;AMR_AF=0.4198;AN=3775;CS=DEL_pindel;EAS_AF=0.4699;END=79981879;EUR_AF=0.4008;NS=2504;SAS_AF=0.5501;SVTYPE=DEL	GT	1
X	80023586	UW_VH_21210	A	<CN0>	100	PASS	AC=6;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,329;CIPOS=-320,0;CS=DEL_union;EAS_AF=0.0026;END=80027813;EUR_AF=0.0052;MC=YL_CN_CHB_4687;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	80088241	BI_GS_DEL1_B2_P2978_36	G	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.0039;END=80174976;EUR_AF=0.0052;MC=YL_CN_KHV_5045,EM_DL_DEL105869;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	80132397	SVA_umary_SVA_840	A	<INS:ME:SVA>	.	PASS	AC=10;AF=0.00264901;AFR_AF=0;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0.0131;EUR_AF=0;MEINFO=SVA,1189,1626,+;NS=2504;SAS_AF=0;SVLEN=437;SVTYPE=SVA;TSD=null	GT	0
X	80139055	DEL_pindel_54003	GAAGGAGAAATCGTGTACATGACCTTAGCTATTACCATATCCTGCACCACCGTGGCTAAACAGGAGGTACTGAGTCTGTCCATGTAACTTGTTAATTACTACTATAAGTGGTATTTGAGAAAGCCAACACACT	G	.	PASS	AC=1115;AF=0.295364;AFR_AF=0.2851;AMR_AF=0.2767;AN=3775;CS=DEL_pindel;EAS_AF=0.2853;END=80139187;EUR_AF=0.2872;NS=2504;SAS_AF=0.3426;SVTYPE=DEL	GT	1
X	80213833	DUP_gs.X_CNV_X_80213833_80232204	A	<CN0>,<CN2>	.	PASS	AC=0,16;AF=0,0.00423841;AFR_AF=0,0.016;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=80232204;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	80215707	UW_VH_10563	G	<CN0>	100	PASS	AC=46;AF=0.0402649;AFR_AF=0.0837;AMR_AF=0.0305;AN=2542;CIEND=0,202;CIPOS=-207,0;CS=DEL_union;EAS_AF=0.0209;END=80219480;EUR_AF=0.0209;MC=YL_CN_ASW_4578;NS=2504;SAS_AF=0.0279;SVTYPE=DEL	GT	.
X	80218748	DUP_gs.X_CNV_X_80218748_80239502	G	<CN0>,<CN2>	.	PASS	AC=0,16;AF=0,0.00423841;AFR_AF=0,0.016;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=80239502;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	80242587	DEL_pindel_54005	TTCTTGATTCTGATGCAAGTGGTCAGCACACCACACTTTGACAAACATTGTAACTTACAATTAAGGCTTACAAA	T	.	PASS	AC=78;AF=0.0206622;AFR_AF=0.0229;AMR_AF=0.0153;AN=3775;CS=DEL_pindel;EAS_AF=0.0236;END=80242660;EUR_AF=0.0196;NS=2504;SAS_AF=0.0195;SVTYPE=DEL	GT	0
X	80254248	BI_GS_DEL1_B5_P2978_146	A	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-20,21;CIPOS=-20,21;CS=DEL_union;EAS_AF=0;END=80260817;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	80287951	YL_CN_PEL_4357	A	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=80295028;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	80292897	DEL_pindel_54006	ACATATTCAAATTAATAAACGTAATTTATCACATAAACAGAACCAATGACAAAAAAACTATGAATATCTCATTAGATGCAGAAAAGGCCTCTGATAAAATTCAACATCCCTTCATGTTAAAAACTCTCAATGAACTAGGTATTGATGGAACATATCTCAAAATAATAAGAGCTGTTTATGATAAACCCACAGCCAATATCATACTGAATGGGAAAAAGCTGGAAGCATTCTTTTTTAAAGCTTGCAAAAAACAAAAATGCCCTTTCTCACCACTCATATTAAACAGAGTATTGGAAGTTCTGCCCAGGGCAAT	A	.	PASS	AC=970;AF=0.256954;AFR_AF=0.2413;AMR_AF=0.2481;AN=3775;CS=DEL_pindel;EAS_AF=0.2723;END=80293209;EUR_AF=0.2454;NS=2504;SAS_AF=0.2813;SVTYPE=DEL	GT	1
X	80315861	L1_umary_LINE1_3076	C	<INS:ME:LINE1>	.	PASS	AC=24;AF=0.00635762;AFR_AF=0.0239;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1177,6000,-;NS=2504;SAS_AF=0;SVLEN=4823;SVTYPE=LINE1;TSD=GAGAAGTGCCTTTC	GT	0
X	80407086	YL_CN_GWD_5887	A	<CN0>	100	PASS	AC=69;AF=0.144636;AFR_AF=0.1346;AMR_AF=0.1393;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1976;END=80411079;EUR_AF=0.1279;MC=BI_GS_DEL1_B3_P2978_6;NS=2504;SAS_AF=0.124;SVTYPE=DEL	GT	.
X	80416445	UW_VH_13494	G	<CN0>	100	PASS	AC=41;AF=0.0813245;AFR_AF=0.0937;AMR_AF=0.0744;AN=2542;CIEND=0,427;CIPOS=-216,0;CS=DEL_union;EAS_AF=0.0589;END=80417473;EUR_AF=0.0862;MC=BI_GS_DEL1_B5_P2978_242;NS=2504;SAS_AF=0.0877;SVTYPE=DEL	GT	.
X	80432257	BI_GS_DEL1_B2_P2978_188	G	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-35,35;CIPOS=-35,35;CS=DEL_union;EAS_AF=0.0013;END=80443836;EUR_AF=0.0039;MC=YL_CN_KHV_5046;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	80463065	UW_VH_6393	A	<CN0>	100	PASS	AC=78;AF=0.13404;AFR_AF=0.1466;AMR_AF=0.1202;AN=2542;CIEND=0,312;CIPOS=-303,0;CS=DEL_union;EAS_AF=0.1531;END=80464024;EUR_AF=0.1149;MC=BI_GS_DEL1_B4_P2978_65;NS=2504;SAS_AF=0.1267;SVTYPE=DEL	GT	.
X	80560379	BI_GS_DEL1_B4_P2978_85	C	<CN0>	100	PASS	AC=19;AF=0.00635762;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=80574562;EUR_AF=0.0052;MC=YL_CN_BEB_3713;NS=2504;SAS_AF=0.0237;SVTYPE=DEL	GT	.
X	80572219	EM_DL_DEL101178732	G	<CN0>	100	PASS	AC=285;AF=0.288212;AFR_AF=0.2971;AMR_AF=0.2901;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.2775;END=80572994;EUR_AF=0.2794;NS=2504;SAS_AF=0.2953;SVTYPE=DEL	GT	.
X	80748584	BI_GS_DEL1_B2_P2978_320	A	<CN0>	100	PASS	AC=19;AF=0.00688742;AFR_AF=0.0179;AMR_AF=0.0057;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=80780548;EUR_AF=0.0065;MC=UW_VH_13998,YL_CN_CLM_3879;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	80948155	ALU_umary_ALU_12690	A	<INS:ME:ALU>	.	PASS	AC=64;AF=0.0169536;AFR_AF=0.0558;AMR_AF=0.0153;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	81042501	BI_GS_DEL1_B4_P2979_5	T	<CN0>	100	PASS	AC=1109;AF=0.478411;AFR_AF=0.6271;AMR_AF=0.5057;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2958;END=81043081;EUR_AF=0.4386;MC=UW_VH_1935;NS=2504;SAS_AF=0.4875;SVTYPE=DEL	GT	.
X	81053376	BI_GS_DEL2_B1_P0606_1	T	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-31,31;CIPOS=-31,31;CS=DEL_union;EAS_AF=0;END=81153674;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	81166206	L1_umary_LINE1_3077	T	<INS:ME:LINE1>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,791,1990,-;NS=2504;SAS_AF=0.0042;SVLEN=1199;SVTYPE=LINE1;TSD=null	GT	0
X	81173657	UW_VH_12807	A	<CN0>	100	PASS	AC=14;AF=0.0121854;AFR_AF=0.016;AMR_AF=0.0134;AN=2542;CIEND=0,212;CIPOS=-226,0;CS=DEL_union;EAS_AF=0.0052;END=81175908;EUR_AF=0.0209;MC=BI_GS_DEL1_B4_P2979_18;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	81237715	BI_GS_DEL1_B3_P2979_13	C	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0;END=81279117;EUR_AF=0.0065;MC=YL_CN_ESN_4453;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	81267904	ALU_umary_ALU_12691	C	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	81292278	YL_CN_YRI_5603	C	<CN0>	100	PASS	AC=6;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=81300668;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	81307626	ALU_umary_ALU_12692	G	<INS:ME:ALU>	.	PASS	AC=17;AF=0.00450331;AFR_AF=0.0169;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	81340526	L1_umary_LINE1_3078	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,4239,4543,+;NS=2504;SAS_AF=0;SVLEN=304;SVTYPE=LINE1;TSD=null	GT	0
X	81395426	YL_CN_IBS_4098	A	<CN0>	100	PASS	AC=64;AF=0.0270199;AFR_AF=0.0877;AMR_AF=0.0153;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=81415858;EUR_AF=0.0065;MC=BI_GS_DEL1_B2_P2979_181;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	81415591	EM_DL_DEL105905	G	<CN0>	100	PASS	AC=9;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0057;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0;END=81419136;EUR_AF=0.0078;MC=BI_GS_DEL1_B2_P2979_187;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	81438272	ALU_umary_ALU_12693	A	<INS:ME:ALU>	.	PASS	AC=8;AF=0.00211921;AFR_AF=0.008;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	81480654	DEL_pindel_54014	CAATGTGGTTTTGAGTTGCATTTCTCTGATGATTAGAAATGATGAGCATTTTT	C	.	PASS	AC=949;AF=0.251391;AFR_AF=0.2283;AMR_AF=0.2538;AN=3775;CS=DEL_pindel;EAS_AF=0.2565;END=81480706;EUR_AF=0.2533;NS=2504;SAS_AF=0.2744;SVTYPE=DEL	GT	1
X	81524829	ALU_umary_ALU_12694	T	<INS:ME:ALU>	.	PASS	AC=30;AF=0.00794702;AFR_AF=0.012;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=AluYb8,3,278,-;NS=2504;SAS_AF=0.0181;SVLEN=275;SVTYPE=ALU;TSD=AAGTCATTCTT	GT	0
X	81584026	BI_GS_DEL1_B1_P2979_301	C	<CN0>	100	PASS	AC=11;AF=0.00476821;AFR_AF=0.004;AMR_AF=0.0076;AN=2542;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0.0026;END=81587382;EUR_AF=0.0091;MC=YL_CN_PUR_5697;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	81596386	BI_GS_DEL1_B3_P2979_28	T	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0;END=81625572;EUR_AF=0.0065;MC=YL_CN_PJL_5065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	81652302	SVA_umary_SVA_841	C	<INS:ME:SVA>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=SVA,1362,1620,+;NS=2504;SAS_AF=0;SVLEN=258;SVTYPE=SVA;TSD=null	GT	0
X	81706625	ALU_umary_ALU_12695	G	<INS:ME:ALU>	.	PASS	AC=25;AF=0.00662252;AFR_AF=0.009;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=AluYb8,1,280,+;NS=2504;SAS_AF=0.0139;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	81831984	YL_CN_MSL_4063	T	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=81837662;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	81901108	BI_GS_DEL1_B2_P2979_406	T	<CN0>	100	PASS	AC=14;AF=0.0280795;AFR_AF=0.0299;AMR_AF=0.0172;AN=2542;CIEND=-30,30;CIPOS=-30,30;CS=DEL_union;EAS_AF=0.0327;END=81902898;EUR_AF=0.0366;NS=2504;SAS_AF=0.0195;SVTYPE=DEL	GT	.
X	81944152	UW_VH_4384	C	<CN0>	100	PASS	AC=10;AF=0.0222517;AFR_AF=0.0229;AMR_AF=0.021;AN=2542;CIEND=0,250;CIPOS=-258,0;CS=DEL_union;EAS_AF=0.0157;END=81946346;EUR_AF=0.0313;MC=BI_GS_DEL1_B4_P2979_126;NS=2504;SAS_AF=0.0195;SVTYPE=DEL	GT	.
X	81982368	BI_GS_DEL1_B2_P2979_450	T	<CN0>	100	PASS	AC=614;AF=0.240795;AFR_AF=0.0738;AMR_AF=0.2328;AN=2542;CIEND=-58,59;CIPOS=-58,59;CS=DEL_union;EAS_AF=0.411;END=81988139;EUR_AF=0.3251;MC=UW_VH_1304,YL_CN_YRI_5605,EM_DL_DEL105913,UW_VH_5198;NS=2504;SAS_AF=0.2089;SVTYPE=DEL	GT	.
X	81985703	YL_CN_GWD_5891	C	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=82003431;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	81997188	DUP_gs.X_CNV_X_81997188_82010483	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=82010483;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	82038473	YL_CN_CHB_4689	T	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=82048134;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	82199150	BI_GS_DEL1_B5_P2980_149	A	<CN0>	100	PASS	AC=12;AF=0.00397351;AFR_AF=0.002;AMR_AF=0.0057;AN=2542;CIEND=-37,37;CIPOS=-37,37;CS=DEL_union;EAS_AF=0;END=82208177;EUR_AF=0.0131;MC=YL_CN_TSI_4418,UW_VH_3424,EM_DL_DEL105919;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	82276466	BI_GS_DEL1_B3_P2980_6	T	<CN0>	100	PASS	AC=6;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0;END=82281774;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	82484873	BI_GS_DEL1_B1_P2980_262	T	<CN0>	100	PASS	AC=6;AF=0.0254305;AFR_AF=0.0249;AMR_AF=0.0382;AN=2542;CIEND=-35,35;CIPOS=-35,35;CS=DEL_union;EAS_AF=0.0157;END=82487113;EUR_AF=0.0248;NS=2504;SAS_AF=0.0279;SVTYPE=DEL	GT	.
X	82696198	L1_umary_LINE1_3079	T	<INS:ME:LINE1>	.	PASS	AC=8;AF=0.00211921;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1977,2411,+;NS=2504;SAS_AF=0.0111;SVLEN=434;SVTYPE=LINE1;TSD=null	GT	0
X	82696397	ALU_umary_ALU_12696	T	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluY,38,281,-;NS=2504;SAS_AF=0;SVLEN=243;SVTYPE=ALU;TSD=null	GT	0
X	82765591	DEL_pindel_54017	TCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGCTAGGGCGACCTTCCGCGCGACCTCACTTCGGCCCTCCTAGAGGAAA	T	.	PASS	AC=684;AF=0.181192;AFR_AF=0.2014;AMR_AF=0.1565;AN=3775;CS=DEL_pindel;EAS_AF=0.1937;END=82765694;EUR_AF=0.1606;NS=2504;SAS_AF=0.1797;SVTYPE=DEL	GT	0
X	82829510	DEL_pindel_54019	TTCAGTTAGTCAGGAGAAACAGGTTCAAGGCATCTCTTGTACACCATGACTGTAGTTAATAACAATGTATTGTAGACTTAAAAATTGCTAATAGAGTAGATTTTAAGTTTTCTCACCCCGCAGAAATGATAAATATGTGAGATAATGCATATGTTAATTAGTTTAATATAGCTATTTCACAAAATGTACATATTTTAAAACATCATGTTGAACACCAAAAATATGTAGAATTTTTATGTCAATTAATACTATTATAAGAATATGATTCCATTTCCAGCAATGTGGCAAACTAAATAACCTGAAAATCTTCCCTCTATCATACCTTTAGAAATGTGAAATTCTCTTATAATATATTCTTTCTCGGTATATATATATATAATATAAAATATTTAAACATGCAGTACTTAAATATACAGAAAATATATAGTATTCTCTCTATATATATTGAGAATATATTATAAGACAATTATAAGAGAATGTATTTAAGAGAGTATATATTATAAGAGAATTAAGAGCTCACATAAGAGCTCAGAAAAGAATAAAGAAACGCCTATAAGCCCCAAATGGAAAGGAAACTCAAAAATAGTGCAAAATGGTACAATTGTAGCTATCGCTGCCCTGGAGAAAGTTGATTGGTC	T	.	PASS	AC=928;AF=0.245828;AFR_AF=0.2493;AMR_AF=0.2099;AN=3775;CS=DEL_pindel;EAS_AF=0.2487;END=82830147;EUR_AF=0.2389;NS=2504;SAS_AF=0.2716;SVTYPE=DEL	GT	1
X	82907087	DUP_gs.X_CNV_X_82907087_82929732	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=82929732;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	82911118	BI_GS_DEL1_B2_P2980_376	T	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0.0026;END=82918079;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	82959581	BI_GS_DEL1_B2_P2980_394	C	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0;END=82975142;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	83018200	L1_umary_LINE1_3080	A	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3504,5769,-;NS=2504;SAS_AF=0.0028;SVLEN=2265;SVTYPE=LINE1;TSD=null	GT	0
X	83026888	DEL_pindel_54021	ATGAGTCTCACAAAGGCTCCAAGTTTGATGTAACTCTGCAACCCAGATGGACCTGGGGAAGACTCAAGGAGGCTACTGAGGCTGTGTGGTAAAGCTGACCTGGGGCTCAAGCTCAGGAGAT	A	.	PASS	AC=1158;AF=0.306755;AFR_AF=0.3001;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2932;END=83027008;EUR_AF=0.3068;NS=2504;SAS_AF=0.3412;SVTYPE=DEL	GT	1
X	83344649	EM_DL_DEL105929	G	<CN0>	100	PASS	AC=3;AF=0.00715232;AFR_AF=0.005;AMR_AF=0.0115;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0026;END=83347502;EUR_AF=0.0117;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	83470608	YL_CN_PEL_4360	A	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=83488221;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	83489877	DUP_gs.X_CNV_X_83489877_83507931	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=83507931;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	83796129	BI_GS_DEL1_B4_P2981_110	C	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0;END=83807679;EUR_AF=0.0065;MC=YL_CN_STU_4621;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	83820465	UW_VH_17083	A	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,145;CIPOS=-138,0;CS=DEL_union;EAS_AF=0;END=83826042;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	83832147	DEL_pindel_54026	TCAGGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATTCTACTCTAAAGGCACATGCACATATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACGAACCCAAATGTCCATCAATGATAGACTGGATAATGAAAATGTGGCACATACACAACATGGAATATTATGCAGCCATAAAAAAGATGAGTTCATGTCCTTTTCAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTAACGCAGGAACAGAAAACCAAACA	T	.	PASS	AC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=DEL_pindel;EAS_AF=0.0039;END=83832459;EUR_AF=0.0013;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0
X	83856998	BI_GS_DEL1_B5_P2981_568	T	<CN0>	100	PASS	AC=19;AF=0.00741722;AFR_AF=0.009;AMR_AF=0.0038;AN=2542;CIEND=-44,45;CIPOS=-44,45;CS=DEL_union;EAS_AF=0.0026;END=83864607;EUR_AF=0.0196;MC=UW_VH_11211,YL_CN_PUR_5699;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	83907426	UW_VH_4213	T	<CN0>	100	PASS	AC=70;AF=0.104106;AFR_AF=0.1117;AMR_AF=0.0878;AN=2542;CIEND=0,110;CIPOS=-212,0;CS=DEL_union;EAS_AF=0.1257;END=83908998;EUR_AF=0.0875;MC=BI_GS_DEL1_B1_P2981_478;NS=2504;SAS_AF=0.1003;SVTYPE=DEL	GT	.
X	84004697	BI_GS_DEL1_B4_P2982_3	G	<CN0>	100	PASS	AC=26;AF=0.0103311;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=84011515;EUR_AF=0.0052;MC=YL_CN_BEB_3715;NS=2504;SAS_AF=0.0446;SVTYPE=DEL	GT	.
X	84095992	UW_VH_5773	C	<CN0>	100	PASS	AC=36;AF=0.0521854;AFR_AF=0.0489;AMR_AF=0.0592;AN=2542;CIEND=0,260;CIPOS=-305,0;CS=DEL_union;EAS_AF=0.0654;END=84097966;EUR_AF=0.0614;MC=BI_GS_DEL1_B4_P2982_18,YL_CN_CDX_3859;NS=2504;SAS_AF=0.0279;SVTYPE=DEL	GT	.
X	84148356	BI_GS_DEL1_B5_P2982_105	T	<CN0>	100	PASS	AC=8;AF=0.0169536;AFR_AF=0.0189;AMR_AF=0.0229;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0131;END=84150339;EUR_AF=0.0209;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	84482579	DEL_pindel_54034	TCTGAATGAGGAATTACAGAGAACAGAAGAACATGTTGAAAGTCACCAAGGGGATGCAATCGCAAAATACAGACTGTGGGGGACTCTA	T	.	PASS	AC=1477;AF=0.391258;AFR_AF=0.345;AMR_AF=0.3664;AN=3775;CS=DEL_pindel;EAS_AF=0.3822;END=84482666;EUR_AF=0.3943;NS=2504;SAS_AF=0.4805;SVTYPE=DEL	GT	1
X	84715318	L1_umary_LINE1_3081	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,1113,5478,-;NS=2504;SAS_AF=0;SVLEN=4365;SVTYPE=LINE1;TSD=null	GT	0
X	84782056	BI_GS_DEL1_B4_P2982_107	G	<CN0>	100	PASS	AC=15;AF=0.0288742;AFR_AF=0.0329;AMR_AF=0.0267;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.034;END=84783772;EUR_AF=0.0352;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	.
X	84824449	EM_DL_DEL105955	A	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0;END=84829237;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	84853876	DEL_pindel_54039	AACAAAAATAAATAGATAGAACTTAGTTAAACTAAAAACTTCTGTACAGCAAAAGAAATAATC	A	.	PASS	AC=261;AF=0.0691391;AFR_AF=0.0339;AMR_AF=0.0878;AN=3775;CS=DEL_pindel;EAS_AF=0.0929;END=84853938;EUR_AF=0.0862;NS=2504;SAS_AF=0.0613;SVTYPE=DEL	GT	0
X	84908626	DEL_pindel_54042	GTTTCATTTTTGTGCAGAAACTTCGTAGTTTGAAGTAGTTTCACTTGTTTATTTCTGCTTTTATTGTCTGTGTTTTTGCT	G	.	PASS	AC=369;AF=0.0977483;AFR_AF=0.1137;AMR_AF=0.0592;AN=3775;CS=DEL_pindel;EAS_AF=0.1217;END=84908705;EUR_AF=0.0927;NS=2504;SAS_AF=0.0836;SVTYPE=DEL	GT	1
X	84948672	BI_GS_DEL1_B2_P2982_420	A	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.0013;END=84956113;EUR_AF=0.0039;MC=YL_CN_CDX_3861;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	85015786	BI_GS_DEL1_B2_P2983_7	T	<CN0>	100	PASS	AC=5;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0013;END=85020608;EUR_AF=0.0065;MC=YL_CN_KHV_5050;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	85249719	DEL_pindel_54049	CAATGGTTGTAGGGATAGTTGCCATTTCAAAGTCAAAGCAAGCCAACAAAACAATAAAACTAAAACCAAACAA	C	.	PASS	AC=310;AF=0.0821192;AFR_AF=0.1037;AMR_AF=0.0515;AN=3775;CS=DEL_pindel;EAS_AF=0.1047;END=85249791;EUR_AF=0.0418;NS=2504;SAS_AF=0.0933;SVTYPE=DEL	GT	0
X	85285296	ALU_umary_ALU_12697	T	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,268,-;NS=2504;SAS_AF=0;SVLEN=267;SVTYPE=ALU;TSD=null	GT	0
X	85334913	DEL_pindel_54052	AACTAGAGGTCATTATGTTAAGTAAAATAAGCCAGGAATAAAAAGACAAATATCACACATTTGCACTCATATGTGGGAGCTAGAAAAGTTGATCTCATGGAGTTAGAATGTAGAGTGATAGTTGTCACAGGCTGGGAAGGGTAGGGTAGATGAAAAAAGGTTGGTTAATGGGTACAAACATACAGTTAGATAAAAGGAATACATTCCAACTTTTAACAGCACAGCAGGATTACTATCATTGATAATAATTTATTGTATATTTCAAAACAGCTAGAAGAGAAGATTTAAGTGTTCCCAACACAAAAAAATGATAAATGTTTGAGGTGATGGATAGCATAAATACCCTGATTTGATCATTACATATTGTATGCATGTATCAAAATATCACATATACCTCACAAATATGTATTATTATTTTGTATCAATAAATAATCTAATATCTTGTCTACAAGTAAATATTCCTGGTTATTTAAAAATGTGTGCTCTAATTAGGATTGAAACAAAATTTATAAATTCCACTTAATTGATACCTCTTTGGTCTTTGTGAATCTAGAACAGTATCTTCTCTC	A	.	PASS	AC=719;AF=0.190464;AFR_AF=0.1565;AMR_AF=0.2137;AN=3775;CS=DEL_pindel;EAS_AF=0.212;END=85335481;EUR_AF=0.1971;NS=2504;SAS_AF=0.1908;SVTYPE=DEL	GT	0
X	85358203	DEL_pindel_54053	ACAGCCAGTGGTTACAACACTGGGCAAGACCCAGTGCTGTGCTGGCTTCACATGTGACC	A	.	PASS	AC=1799;AF=0.476556;AFR_AF=0.4955;AMR_AF=0.5935;AN=3775;CS=DEL_pindel;EAS_AF=0.3285;END=85358261;EUR_AF=0.5366;NS=2504;SAS_AF=0.4582;SVTYPE=DEL	GT	1
X	85434728	L1_umary_LINE1_3082	G	<INS:ME:LINE1>	.	PASS	AC=17;AF=0.00450331;AFR_AF=0;AMR_AF=0.0324;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4889,6018,+;NS=2504;SAS_AF=0;SVLEN=1129;SVTYPE=LINE1;TSD=null	GT	0
X	85537769	DEL_pindel_54055	AGACACTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGCTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	A	.	PASS	AC=2455;AF=0.650331;AFR_AF=0.658;AMR_AF=0.6508;AN=3775;CS=DEL_pindel;EAS_AF=0.6531;END=85538081;EUR_AF=0.6214;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6671;SVTYPE=DEL_ALU	GT	0
X	85725040	DEL_pindel_54058	TTTCATTGATATTCTGCTGTGGCACTGTTAATCTTATTTTGATTGAAACAGAGTTCTGGACAGTAAAATTGATG	T	.	PASS	AC=1431;AF=0.379073;AFR_AF=0.5174;AMR_AF=0.3492;AN=3775;CS=DEL_pindel;EAS_AF=0.3089;END=85725113;EUR_AF=0.3094;NS=2504;SAS_AF=0.3565;SVTYPE=DEL	GT	1
X	85750744	L1_umary_LINE1_3083	A	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=LINE1,4089,5258,+;NS=2504;SAS_AF=0;SVLEN=1169;SVTYPE=LINE1;TSD=null	GT	0
X	85781798	L1_umary_LINE1_3084	A	<INS:ME:LINE1>	.	PASS	AC=372;AF=0.098543;AFR_AF=0.0638;AMR_AF=0.0496;AN=3775;CS=L1_umary;EAS_AF=0.233;EUR_AF=0.0418;MEINFO=LINE1,2558,6019,+;NS=2504;SAS_AF=0.1003;SVLEN=3461;SVTYPE=LINE1;TSD=AGAAATGAAAATTAGA	GT	0
X	85788275	DEL_pindel_54059	CTGACTCCCCAAATTATTTTACATTTATTTTTATTAATTATCTGTCCCTTGCTTGAAACTCTTCTATGCCCTTTCATTGAAAGTAAAGTTAAAATTCCTTCACATAGAAAAAGTGTTTTTCTGATCTTCTTTAT	C	.	PASS	AC=559;AF=0.148079;AFR_AF=0.0937;AMR_AF=0.1469;AN=3775;CS=DEL_pindel;EAS_AF=0.1924;END=85788408;EUR_AF=0.1619;NS=2504;SAS_AF=0.163;SVTYPE=DEL	GT	1
X	85878760	DEL_pindel_54061	TAAAAAGTGGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCTACACAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAACAAAACAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1332;AF=0.352848;AFR_AF=0.331;AMR_AF=0.3168;AN=3775;CS=DEL_pindel;EAS_AF=0.4045;END=85879080;EUR_AF=0.3198;MEINFO=AluYg6a2,1,281,+;NS=2504;SAS_AF=0.39;SVTYPE=DEL_ALU	GT	0
X	85893094	BI_GS_DEL1_B3_P2983_32	T	<CN0>	100	PASS	AC=9;AF=0.00900662;AFR_AF=0.015;AMR_AF=0.0076;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.0065;END=85895372;EUR_AF=0.0104;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	85934792	DEL_pindel_54064	GAGCCTGTGTGGTGTGCTGGTGCATATTTAACCTTTCCTCCTTACAGGAATGGGTCTGAGCTTAACGGTCATTATGTATTAAAATTTGGTAGGCTGTA	G	.	PASS	AC=479;AF=0.126887;AFR_AF=0.0997;AMR_AF=0.1279;AN=3775;CS=DEL_pindel;EAS_AF=0.1793;END=85934889;EUR_AF=0.1188;NS=2504;SAS_AF=0.117;SVTYPE=DEL	GT	0
X	85935550	L1_umary_LINE1_3085	T	<INS:ME:LINE1>	.	PASS	AC=5;AF=0.0013245;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0039;MEINFO=LINE1,5171,5904,+;NS=2504;SAS_AF=0.0028;SVLEN=733;SVTYPE=LINE1;TSD=null	GT	0
X	86036345	BI_GS_DEL1_B2_P2984_19	G	<CN0>	100	PASS	AC=22;AF=0.0368212;AFR_AF=0.0339;AMR_AF=0.0496;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0471;END=86038149;EUR_AF=0.0313;NS=2504;SAS_AF=0.0265;SVTYPE=DEL	GT	.
X	86089540	UW_VH_7227	A	<CN0>	100	PASS	AC=70;AF=0.0953642;AFR_AF=0.1176;AMR_AF=0.0802;AN=2542;CIEND=0,185;CIPOS=-246,0;CS=DEL_union;EAS_AF=0.0903;END=86090568;EUR_AF=0.111;MC=BI_GS_DEL1_B5_P2984_73;NS=2504;SAS_AF=0.0641;SVTYPE=DEL	GT	.
X	86095313	ALU_umary_ALU_12698	T	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluY,2,258,-;NS=2504;SAS_AF=0;SVLEN=256;SVTYPE=ALU;TSD=null	GT	0
X	86137692	DEL_pindel_54068	GATATATATATATATATATATATATATATATATATATATATATATATATATAT	G	.	PASS	AC=2501;AF=0.662517;AFR_AF=0.67;AMR_AF=0.729;AN=3775;CS=DEL_pindel;EAS_AF=0.6584;END=86137744;EUR_AF=0.6358;NS=2504;SAS_AF=0.6365;SVTYPE=DEL	GT	1
X	86162347	ALU_umary_ALU_12699	C	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluYa3_3,5,281,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null	GT	0
X	86234440	DEL_pindel_54069	GACTAAAAAACAAAAGCATATGATCATTTTAATTAATGTAGGAAAAGCATATGGAAAAATTCATCATCATTTCATGATGAAAACCTCTCAAGAAATTAGGTATAGAAAAAAAGTACCTCAACATAGTAAAGGCTATATTTTACAGGCCCAGAGCTAATATCAAAAATAAAAGTTGGAAGCTTTTCTTCTAAGATCAGGAACAAAACAAGAATGCT	G	.	PASS	AC=222;AF=0.058808;AFR_AF=0.0329;AMR_AF=0.0592;AN=3775;CS=DEL_pindel;EAS_AF=0.0641;END=86234654;EUR_AF=0.0822;NS=2504;SAS_AF=0.0641;SVTYPE=DEL	GT	0
X	86286771	BI_GS_DEL1_B2_P2984_142	G	<CN0>	100	PASS	AC=1097;AF=0.496159;AFR_AF=0.67;AMR_AF=0.6279;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3599;END=86287222;EUR_AF=0.4295;MC=UW_VH_1307;NS=2504;SAS_AF=0.3733;SVTYPE=DEL	GT	.
X	86428039	BI_GS_DEL1_B3_P2984_20	G	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-29,29;CIPOS=-29,29;CS=DEL_union;EAS_AF=0;END=86475920;EUR_AF=0.0039;MC=YL_CN_ITU_4718;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	86500636	L1_umary_LINE1_3087	T	<INS:ME:LINE1>	.	PASS	AC=24;AF=0.00635762;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0052;MEINFO=LINE1,5521,5884,-;NS=2504;SAS_AF=0.0279;SVLEN=363;SVTYPE=LINE1;TSD=TT	GT	0
X	86502244	BI_GS_DEL2_B5_P0607_1	A	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-48,48;CIPOS=-48,48;CS=DEL_union;EAS_AF=0;END=86610468;EUR_AF=0.0065;MC=YL_CN_LWK_4239;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	86533991	BI_GS_DEL1_B2_P2984_247	T	<CN0>	100	PASS	AC=16;AF=0.00503311;AFR_AF=0.014;AMR_AF=0.0019;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=86538705;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	86595640	ALU_umary_ALU_12700	C	<INS:ME:ALU>	.	PASS	AC=42;AF=0.0111258;AFR_AF=0.0409;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYc1,4,281,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=AAGAAACTGAC	GT	0
X	86918439	ALU_umary_ALU_12701	C	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluUndef,21,281,+;NS=2504;SAS_AF=0;SVLEN=260;SVTYPE=ALU;TSD=null	GT	0
X	86927596	ALU_umary_ALU_12702	T	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluY,4,280,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null	GT	0
X	86932640	YL_CN_STU_4624	G	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=88168710;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	86990326	UW_VH_11125	T	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,103;CIPOS=-127,0;CS=DEL_union;EAS_AF=0;END=87382210;EUR_AF=0.0078;MC=YL_CN_IBS_4101,BI_GS_DEL2_B2_P0607_1;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	87230496	L1_umary_LINE1_3088	A	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5355,5721,-;NS=2504;SAS_AF=0;SVLEN=366;SVTYPE=LINE1;TSD=null	GT	0
X	87574694	DUP_gs.X_CNV_X_87574694_87592766	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=87592766;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	87610575	UW_VH_13597	T	<CN0>	100	PASS	AC=49;AF=0.0834437;AFR_AF=0.0947;AMR_AF=0.0744;AN=2542;CIEND=0,350;CIPOS=-253,0;CS=DEL_union;EAS_AF=0.0825;END=87611920;EUR_AF=0.0927;MC=BI_GS_DEL1_B5_P2985_403;NS=2504;SAS_AF=0.0655;SVTYPE=DEL	GT	.
X	87658699	BI_GS_DEL1_B1_P2985_336	C	<CN0>	100	PASS	AC=31;AF=0.0182781;AFR_AF=0.015;AMR_AF=0.0134;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0052;END=87660937;EUR_AF=0.0483;MC=YL_CN_CEU_5448,UW_VH_2275;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	.
X	87665507	YL_CN_LWK_4240	T	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=87704064;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	87742017	DUP_gs.X_CNV_X_87742017_87786924	A	<CN0>,<CN2>	.	PASS	AC=0,5;AF=0,0.0013245;AFR_AF=0,0.003;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=87786924;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	87796096	UW_VH_21732	A	<CN0>	100	PASS	AC=149;AF=0.162119;AFR_AF=0.1795;AMR_AF=0.124;AN=2542;CIEND=0,250;CIPOS=-252,0;CS=DEL_union;EAS_AF=0.1623;END=87798129;EUR_AF=0.1397;MC=BI_GS_DEL1_B4_P2985_97;NS=2504;SAS_AF=0.1894;SVTYPE=DEL	GT	.
X	87976556	ALU_umary_ALU_12703	T	<INS:ME:ALU>	.	PASS	AC=124;AF=0.0328477;AFR_AF=0.0658;AMR_AF=0.0344;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0457;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.007;SVLEN=280;SVTYPE=ALU;TSD=AAATTCTTTTCT	GT	0
X	88028291	ALU_umary_ALU_12704	T	<INS:ME:ALU>	.	PASS	AC=60;AF=0.015894;AFR_AF=0.001;AMR_AF=0.0267;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0509;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.0084;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	88177670	BI_GS_DEL1_B2_P2986_82	A	<CN0>	100	PASS	AC=6;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-43,44;CIPOS=-43,44;CS=DEL_union;EAS_AF=0;END=88184564;EUR_AF=0.0065;MC=YL_CN_GWD_5893;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	88240799	UW_VH_3081	G	<CN0>	100	PASS	AC=37;AF=0.0688742;AFR_AF=0.0548;AMR_AF=0.084;AN=2542;CIEND=0,168;CIPOS=-189,0;CS=DEL_union;EAS_AF=0.0851;END=88242821;EUR_AF=0.0718;MC=BI_GS_DEL1_B5_P2986_170;NS=2504;SAS_AF=0.0571;SVTYPE=DEL	GT	.
X	88300568	UW_VH_5262	A	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,312;CIPOS=-258,0;CS=DEL_union;EAS_AF=0;END=88308148;EUR_AF=0.0104;MC=BI_GS_DEL1_B1_P2986_137,YL_CN_FIN_4322;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	88368129	BI_GS_DEL1_B5_P2986_263	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-21,22;CIPOS=-21,22;CS=DEL_union;EAS_AF=0;END=88377202;EUR_AF=0.0078;MC=YL_CN_TSI_4421;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	88419336	DEL_pindel_54091	TTGCTAGTAAAGGATTCACATGCTTACTATGGTTCGTTTTGATGGGAGTCTCTGAACGCCACTGTTTCTAGTGAGCCATCTAAAAACCATTATATATAAAGTTTCGG	T	.	PASS	AC=1180;AF=0.312583;AFR_AF=0.318;AMR_AF=0.3149;AN=3775;CS=DEL_pindel;EAS_AF=0.2945;END=88419442;EUR_AF=0.2977;NS=2504;SAS_AF=0.3384;SVTYPE=DEL	GT	1
X	88472162	UW_VH_4143	T	<CN0>	100	PASS	AC=6;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,121;CIPOS=-111,0;CS=DEL_union;EAS_AF=0;END=88481000;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	88557153	UW_VH_14803	A	<CN0>	100	PASS	AC=66;AF=0.0974834;AFR_AF=0.1336;AMR_AF=0.0992;AN=2542;CIEND=0,265;CIPOS=-255,0;CS=DEL_union;EAS_AF=0.0733;END=88559909;EUR_AF=0.1005;MC=EM_DL_DEL106104,YL_CN_YRI_5606,YL_CN_GWD_5895,BI_GS_DEL1_B3_P2986_12;NS=2504;SAS_AF=0.0682;SVTYPE=DEL	GT	.
X	88986665	L1_umary_LINE1_3089	A	<INS:ME:LINE1>	.	PASS	AC=121;AF=0.032053;AFR_AF=0.0209;AMR_AF=0.0401;AN=3775;CS=L1_umary;EAS_AF=0.0497;EUR_AF=0.0117;MEINFO=LINE1,38,5935,-;NS=2504;SAS_AF=0.0446;SVLEN=5897;SVTYPE=LINE1;TSD=null	GT	0
X	89005208	DUP_gs.X_CNV_X_89005208_89131673	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=89131673;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	89033734	BI_GS_DEL1_B5_P2987_9	G	<CN0>	100	PASS	AC=32;AF=0.0150993;AFR_AF=0.008;AMR_AF=0.0019;AN=2542;CIEND=-6,6;CIPOS=-6,6;CS=DEL_union;EAS_AF=0.0026;END=89041116;EUR_AF=0.0078;MC=YL_CN_BEB_3718;NS=2504;SAS_AF=0.0557;SVTYPE=DEL	GT	.
X	89320909	DEL_pindel_54093	TGTTCACTGAATTCATATTACTGGAAGAAAGATTAAAGTCTTTCAACACACGTGGACAGACTTATACCATTGTTGACAAAAAAAAAGCCAAATTATCTAAAATATTTAAAGAGGTTTATTCTGAGCTCATATGAATGGCCATGACCTG	T	.	PASS	AC=271;AF=0.0717881;AFR_AF=0.0828;AMR_AF=0.0954;AN=3775;CS=DEL_pindel;EAS_AF=0.0641;END=89321056;EUR_AF=0.077;NS=2504;SAS_AF=0.0418;SVTYPE=DEL	GT	0
X	89337501	BI_GS_DEL1_B4_P2987_22	A	<CN0>	100	PASS	AC=114;AF=0.141722;AFR_AF=0.1874;AMR_AF=0.1069;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.1034;END=89338729;EUR_AF=0.1449;MC=UW_VH_9801;NS=2504;SAS_AF=0.1407;SVTYPE=DEL	GT	.
X	89448558	BI_GS_DEL1_B1_P2987_102	C	<CN0>	100	PASS	AC=12;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.0013;END=89496553;EUR_AF=0.0078;MC=YL_CN_TSI_4422;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	89578368	BI_GS_DEL1_B2_P2987_92	C	<CN0>	100	PASS	AC=581;AF=0.301457;AFR_AF=0.5145;AMR_AF=0.2347;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.199;END=89580380;EUR_AF=0.2507;MC=EM_DL_DEL106117,UW_VH_1659,YL_CN_ITU_4720,YL_CN_CHS_4755;NS=2504;SAS_AF=0.2159;SVTYPE=DEL	GT	.
X	89893294	BI_GS_DEL1_B4_P2987_39	A	<CN0>	100	PASS	AC=21;AF=0.00821192;AFR_AF=0.003;AMR_AF=0.0172;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.0013;END=89911689;EUR_AF=0.0235;MC=YL_CN_IBS_4103;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	90188025	ALU_umary_ALU_12705	G	<INS:ME:ALU>	.	PASS	AC=98;AF=0.0259603;AFR_AF=0.007;AMR_AF=0.0191;AN=3775;CS=ALU_umary;EAS_AF=0.0196;EUR_AF=0.0601;MEINFO=AluYa5,1,280,+;NS=2504;SAS_AF=0.0279;SVLEN=279;SVTYPE=ALU;TSD=AAAAGAAACAAAAAATAG	GT	0
X	90245430	DUP_gs.X_CNV_X_90245430_90339633	A	<CN0>,<CN2>	.	PASS	AC=0,5;AF=0,0.0013245;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=90339633;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	90250870	DEL_pindel_54095	CAGGTGGGGACTTGGAGAACTTTTAAGTCTAGCTAAAGGTTTGTAAATGCACCAATCAGCACTTTGTGTCTAACTCA	C	.	PASS	AC=548;AF=0.145166;AFR_AF=0.1396;AMR_AF=0.1718;AN=3775;CS=DEL_pindel;EAS_AF=0.1754;END=90250946;EUR_AF=0.124;NS=2504;SAS_AF=0.124;SVTYPE=DEL	GT	1
X	90283367	BI_GS_DEL1_B2_P2988_51	C	<CN0>	100	PASS	AC=1707;AF=0.689801;AFR_AF=0.7039;AMR_AF=0.7519;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8979;END=90284081;EUR_AF=0.5261;MC=UW_VH_1308;NS=2504;SAS_AF=0.578;SVTYPE=DEL	GT	.
X	90285432	DUP_gs.X_CNV_X_90285432_90396308	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=90396308;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	90335646	SVA_umary_SVA_842	T	<INS:ME:SVA>	.	PASS	AC=45;AF=0.0119205;AFR_AF=0.001;AMR_AF=0.0134;AN=3775;CS=SVA_umary;EAS_AF=0.0196;EUR_AF=0.0196;MEINFO=SVA,24,480,-;NS=2504;SAS_AF=0.0097;SVLEN=456;SVTYPE=SVA;TSD=null	GT	0
X	90358348	BI_GS_DEL1_B2_P2988_91	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0;END=90369288;EUR_AF=0.0065;MC=YL_CN_IBS_4104;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	90405133	DUP_gs.X_CNV_X_90405133_90434055	T	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=90434055;EUR_AF=0.0026,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	90410866	BI_GS_DEL1_B1_P2988_95	T	<CN0>	100	PASS	AC=11;AF=0.00291391;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-50,51;CIPOS=-50,51;CS=DEL_union;EAS_AF=0.0013;END=90435898;EUR_AF=0.0091;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	90465927	YL_CN_ACB_5109	T	<CN0>	100	PASS	AC=11;AF=0.0362914;AFR_AF=0.0299;AMR_AF=0.0344;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.038;END=90470833;EUR_AF=0.0509;NS=2504;SAS_AF=0.0292;SVTYPE=DEL	GT	.
X	90479371	YL_CN_ESN_4459	G	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=90545090;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	90489412	UW_VH_10433	G	<CN0>	100	PASS	AC=11;AF=0.00291391;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,215;CIPOS=-205,0;CS=DEL_union;EAS_AF=0;END=90515019;EUR_AF=0.0078;MC=YL_CN_PUR_5703,BI_GS_DEL1_B1_P2988_109;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	90534152	ALU_umary_ALU_12706	A	<INS:ME:ALU>	.	PASS	AC=241;AF=0.0638411;AFR_AF=0.0459;AMR_AF=0.0534;AN=3775;CS=ALU_umary;EAS_AF=0.0209;EUR_AF=0.1031;MEINFO=AluUndef,43,281,+;NS=2504;SAS_AF=0.1003;SVLEN=238;SVTYPE=ALU;TSD=AAGAGTGGCAAGACA	GT	0
X	90660188	UW_VH_22828	A	<CN0>	100	PASS	AC=15;AF=0.0264901;AFR_AF=0.0239;AMR_AF=0.0439;AN=2542;CIEND=0,109;CIPOS=-199,0;CS=DEL_union;EAS_AF=0.0288;END=90661748;EUR_AF=0.0248;MC=EM_DL_DEL101181378,BI_GS_DEL1_B5_P2988_263;NS=2504;SAS_AF=0.0167;SVTYPE=DEL	GT	.
X	90726826	ALU_umary_ALU_12707	C	<INS:ME:ALU>	.	PASS	AC=79;AF=0.0209271;AFR_AF=0.0269;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0.0105;EUR_AF=0;MEINFO=AluUndef,17,281,+;NS=2504;SAS_AF=0.0585;SVLEN=264;SVTYPE=ALU;TSD=null	GT	0
X	90760889	DEL_pindel_54096	CTATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	C	.	PASS	AC=907;AF=0.240265;AFR_AF=0.2094;AMR_AF=0.2405;AN=3775;CS=DEL_pindel;EAS_AF=0.2435;END=90760947;EUR_AF=0.2637;NS=2504;SAS_AF=0.2549;SVTYPE=DEL	GT	1
X	90952499	EM_DL_DEL106137	A	<CN0>	100	PASS	AC=7;AF=0.00741722;AFR_AF=0.006;AMR_AF=0.0038;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0039;END=90957876;EUR_AF=0.0131;MC=YL_CN_CHB_4693;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	90969442	UW_VH_9594	A	<CN0>	100	PASS	AC=21;AF=0.00715232;AFR_AF=0.0219;AMR_AF=0.0038;AN=2542;CIEND=0,275;CIPOS=-214,0;CS=DEL_union;EAS_AF=0.0013;END=90979091;EUR_AF=0.0026;MC=YL_CN_LWK_4245,BI_GS_DEL1_B3_P2988_19;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	91030708	DEL_pindel_54098	CAATTTGTGATGTAAAACACAAAAAAAGAATGGAATTTAGTGCAAAATAACTGTCACATGATAAATACAAATTACTCTGTTGTCATCTATCTGCATGACCTGT	C	.	PASS	AC=83;AF=0.0219868;AFR_AF=0.011;AMR_AF=0.0439;AN=3775;CS=DEL_pindel;EAS_AF=0.034;END=91030810;EUR_AF=0.0144;NS=2504;SAS_AF=0.0167;SVTYPE=DEL	GT	0
X	91367532	BI_GS_DEL1_B4_P2989_8	A	<CN0>	100	PASS	AC=177;AF=0.156821;AFR_AF=0.2213;AMR_AF=0.1698;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0929;END=91368793;EUR_AF=0.1775;MC=EM_DL_DEL101181474,UW_VH_8548;NS=2504;SAS_AF=0.1031;SVTYPE=DEL	GT	.
X	91469248	UW_VH_25158	C	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,228;CIPOS=-159,0;CS=DEL_union;EAS_AF=0.0013;END=91485830;EUR_AF=0.0065;MC=YL_CN_GIH_3462,EM_DL_DEL106142;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	91556720	ALU_umary_ALU_12708	G	<INS:ME:ALU>	.	PASS	AC=134;AF=0.0354967;AFR_AF=0.0788;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0.0183;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.0487;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	91678126	BI_GS_DEL1_B2_P2989_108	G	<CN0>	100	PASS	AC=362;AF=0.206093;AFR_AF=0.1007;AMR_AF=0.1908;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1846;END=91680088;EUR_AF=0.3916;MC=YL_CN_MXL_3768,YL_CN_ITU_4722,YL_CN_KHV_5051,YL_CN_IBS_4105,UW_VH_1309;NS=2504;SAS_AF=0.1894;SVTYPE=DEL	GT	.
X	91692632	L1_umary_LINE1_3090	T	<INS:ME:LINE1>	.	PASS	AC=27;AF=0.00715232;AFR_AF=0.0259;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5324,6018,-;NS=2504;SAS_AF=0;SVLEN=694;SVTYPE=LINE1;TSD=GCTTTTGAGTCTT	GT	0
X	91750760	UW_VH_8096	A	<CN0>	100	PASS	AC=388;AF=0.303576;AFR_AF=0.3739;AMR_AF=0.2863;AN=2542;CIEND=0,364;CIPOS=-301,0;CS=DEL_union;EAS_AF=0.267;END=91751796;EUR_AF=0.2977;MC=BI_GS_DEL1_B2_P2989_117;NS=2504;SAS_AF=0.2632;SVTYPE=DEL	GT	.
X	91805281	ALU_umary_ALU_12709	A	<INS:ME:ALU>	.	PASS	AC=81;AF=0.0214569;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0406;EUR_AF=0.0039;MEINFO=AluUndef,4,278,+;NS=2504;SAS_AF=0.0655;SVLEN=274;SVTYPE=ALU;TSD=null	GT	0
X	91989147	ALU_umary_ALU_12710	T	<INS:ME:ALU>	.	PASS	AC=1004;AF=0.26596;AFR_AF=0.2034;AMR_AF=0.1641;AN=3775;CS=ALU_umary;EAS_AF=0.5236;EUR_AF=0.1749;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.2507;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAATGCATGATTTT	GT	1
X	92133621	DEL_pindel_54101	GTGGAAACACCAAGTACACAACATATGGACCAAAGTAGGTTTATGACAACTCTGGAAATCAGTTAAGAAGCTGCAGCATCTAAGAGAACCCTAAGCCAAGAAAAAGCCACACTCAAAATGGTGATATGTTTTGTGGCATTTTTTCTTGCCCATGTCCCTACCCCCTCCCTGTTGTGTTGTGGCATAGTTGGGAGGAAGCCTCCTTAATTCCTAGTTTCTCAATACAGAAGAAAAACAGTAAAACTTGTTCACAATAATGTGGCTTGTCTTGGGCCTACCC	G	.	PASS	AC=866;AF=0.229404;AFR_AF=0.1834;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2448;END=92133900;EUR_AF=0.2402;NS=2504;SAS_AF=0.2632;SVTYPE=DEL	GT	1
X	92270809	BI_GS_DEL1_B3_P2990_5	A	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-29,30;CIPOS=-29,30;CS=DEL_union;EAS_AF=0.0013;END=92280493;EUR_AF=0.0052;MC=YL_CN_GWD_5898;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	92309557	BI_GS_DEL1_B5_P2990_63	T	<CN0>	100	PASS	AC=18;AF=0.00609272;AFR_AF=0.015;AMR_AF=0.0038;AN=2542;CIEND=-18,19;CIPOS=-18,19;CS=DEL_union;EAS_AF=0.0013;END=92359120;EUR_AF=0.0065;MC=YL_CN_ACB_5111;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	92394511	UW_VH_23914	C	<CN0>	100	PASS	AC=15;AF=0.0495364;AFR_AF=0.0538;AMR_AF=0.0382;AN=2542;CIEND=0,141;CIPOS=-151,0;CS=DEL_union;EAS_AF=0.0419;END=92395983;EUR_AF=0.0679;MC=BI_GS_DEL1_B5_P2990_89;NS=2504;SAS_AF=0.0404;SVTYPE=DEL	GT	.
X	92405974	BI_GS_DEL1_B2_P2990_80	A	<CN0>	100	PASS	AC=13;AF=0.0233113;AFR_AF=0.014;AMR_AF=0.0267;AN=2542;CIEND=-62,62;CIPOS=-62,62;CS=DEL_union;EAS_AF=0.017;END=92407886;EUR_AF=0.0457;NS=2504;SAS_AF=0.0167;SVTYPE=DEL	GT	.
X	92467551	ALU_umary_ALU_12711	T	<INS:ME:ALU>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=CTATATATTTTT	GT	0
X	92525640	DEL_pindel_54103	TTATATACCAGCTCCCCAGGTGTAACAGTCTTTCCATGGACTCTCAATTCTGTTTCACTGAAATGTCAGTTCATTTCTGCACTAGCACCACACAATTTTACATATCATAGCATTACATTTTAACATCTGGTTTGTCAAGCTCCCCAACTAATTATTTTTAATTTTCTGGGTTCTATCAATACATATATATTGAGTAACTACTATGTGCAAGGAATTCTTATAGGGACTTGGTATACCTCTGTAAACAAAATTTCTGTCATTATGGTGCTTACATTCCAGTGAATATTTTAATTAATAAGCTCACGATTATTCCTGCATATAAATTTAAAAATAATATAATCAAGTTCTCCTCCTAAATCCTAGTTAGTAATTTTATAGAATAATTTGTGAAAAATCATATTATTGCATTATTTAATCTTTCTAAGTTCTAACTATTTATTGAAGTCTTTATTGTATTCTATAATCAGGC	T	.	PASS	AC=649;AF=0.171921;AFR_AF=0.1685;AMR_AF=0.1641;AN=3775;CS=DEL_pindel;EAS_AF=0.1767;END=92526108;EUR_AF=0.1658;NS=2504;SAS_AF=0.1838;SVTYPE=DEL	GT	1
X	92574087	DEL_pindel_54104	TCACCCAGTAGTCATTAAGGAGCAGGTTGTTCAGTTTTTTTTGCTGGCAAGGTGGCCGAATAGGAACAGCTCCAGTCTG	T	.	PASS	AC=505;AF=0.133775;AFR_AF=0.1117;AMR_AF=0.1527;AN=3775;CS=DEL_pindel;EAS_AF=0.1558;END=92574165;EUR_AF=0.1279;NS=2504;SAS_AF=0.1337;SVTYPE=DEL	GT	1
X	92590148	ALU_umary_ALU_12712	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluYc1,1,223,-;NS=2504;SAS_AF=0;SVLEN=222;SVTYPE=ALU;TSD=AATATACCTACTTATT	GT	0
X	92672301	DEL_pindel_54106	TTTTATATATATATATATACGTATATATATACACGTGTATATATATATATATATATATATATA	T	.	PASS	AC=924;AF=0.244768;AFR_AF=0.2024;AMR_AF=0.2595;AN=3775;CS=DEL_pindel;EAS_AF=0.2736;END=92672363;EUR_AF=0.2533;NS=2504;SAS_AF=0.2535;SVTYPE=DEL	GT	1
X	92721911	UW_VH_15203	A	<CN0>	100	PASS	AC=16;AF=0.0262252;AFR_AF=0.0359;AMR_AF=0.021;AN=2542;CIEND=0,289;CIPOS=-264,0;CS=DEL_union;EAS_AF=0.0131;END=92723931;EUR_AF=0.0339;MC=YL_CN_GWD_5900,BI_GS_DEL1_B5_P2990_325;NS=2504;SAS_AF=0.0223;SVTYPE=DEL	GT	.
X	92744087	ALU_umary_ALU_12713	T	<INS:ME:ALU>	.	PASS	AC=194;AF=0.0513907;AFR_AF=0.005;AMR_AF=0.0782;AN=3775;CS=ALU_umary;EAS_AF=0.0955;EUR_AF=0.0457;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.0557;SVLEN=280;SVTYPE=ALU;TSD=CCCAATTTTCTT	GT	0
X	92796294	BI_GS_DEL1_B1_P2990_297	A	<CN0>	100	PASS	AC=733;AF=0.290861;AFR_AF=0.2453;AMR_AF=0.1469;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2788;END=92801506;EUR_AF=0.3042;MC=UW_VH_23412,UW_VH_18084,UW_VH_11048,EM_DL_DEL106244,YL_CN_PUR_5708,UW_VH_25309,UW_VH_2774,UW_VH_5594;NS=2504;SAS_AF=0.4582;SVTYPE=DEL	GT	.
X	92866378	UW_VH_5707	G	<CN0>	100	PASS	AC=14;AF=0.00397351;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,233;CIPOS=-251,0;CS=DEL_union;EAS_AF=0.0105;END=92874876;EUR_AF=0.0052;MC=BI_GS_DEL1_B4_P2990_94,EM_DL_DEL106248,YL_CN_CHB_4695;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	93149072	DEL_pindel_54108	GCCAGACTATTACAAACGTTACCTTAAGGGTCAAGATCTCTTAAGTCAGCTTGTGGTGAATGCTTTTTGGCCTGGGATTCATCCTTCCAGACAGTGGGCTCCCCTCTGGTCTTGGGCAGCTGCAGAAATGCTGTTCAAGAGTCAAGTTTTAAGAGTCAGGGACCTCAGGAGCCCACTTGATGCTGTACCCCCATATAGTGATGTTTGTACCTGAGGTAAAAGGCAAAGTCCCCTTTACTTTTTCCTCTGCTTTTCTCAAGCAGAAAGAGTTTTGCTCCATAGCCACCATAGCTGGTAGTGTGCTGAGTCTCATCTGAAACCAACAAGTCTCAGAGGCTCACCAAAGCCCTCCACGTAGTACCTGGGTATGGCTGCTGGCTTTTCAGGACCCAAGGGCTCTTGAGTTAGCAGGTGATAAAAGCTGGCAGGACTGTGTCCTTCCCTTAAAGGCAGCCAGTTTACTTCTGGCCCAGGGTATGTCTAGAAGTGTCAGCTGGGAGCTAAGGCCTGCAATGGGTGCATCGTGACTCTGACTAGTGCCCTATCTTACTGTGGCTGAGCTGTTATCCAAGATGCAAGACAAAGTTCTCCCAACTCTTCTCCCTCCTCTCCTCATGCGGAATGAAGGGGTCTCTTTTGGAGCTGCAAGCTCTGAAGCCTGGGGTTAAAAGATGGGCAATACCAGCACCCCCTTGGCTTCCCCATTTGATGTCTCAGTGTATCTCATTCCCCCCACCCCCCAGTCCACTGTCTCTAAGTATTGTTCAGCCCTAGGACTAGCCTAAGAGTTGCGGTCCTTATGGCCTAGTCTGACTCTCAAGTTTACCTAGAGACTGAGAGCACTTTGCCCCTCAGTGGCAAGTTTTGCACACAGTCAGTTTTGGA	G	.	PASS	AC=221;AF=0.058543;AFR_AF=0.0379;AMR_AF=0.1164;AN=3775;CS=DEL_pindel;EAS_AF=0.0563;END=93149956;EUR_AF=0.0535;NS=2504;SAS_AF=0.0529;SVTYPE=DEL	GT	1
X	93167765	BI_GS_DEL1_B5_P2991_122	T	<CN0>	100	PASS	AC=208;AF=0.236026;AFR_AF=0.2981;AMR_AF=0.2252;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1963;END=93168395;EUR_AF=0.2298;MC=UW_VH_7699;NS=2504;SAS_AF=0.2061;SVTYPE=DEL	GT	.
X	93186810	BI_GS_DEL1_B3_P2991_6	C	<CN0>	100	PASS	AC=114;AF=0.161325;AFR_AF=0.2074;AMR_AF=0.1336;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1479;END=93187985;EUR_AF=0.1332;MC=UW_VH_12284;NS=2504;SAS_AF=0.1616;SVTYPE=DEL	GT	.
X	93239768	DEL_pindel_54111	CATAAACTAAATAAATAGTTGTTATTTTAAACCACTAAGTTTGGGGGTGGTTTAATATGCAGAATAAGCTATATGCTACATCTGTATGAAATATCAGTTTGTTTTTATCCCAGAATTTATTCACCCAGCCAGTTACTTATTTGACTAATGGAAAAAACACCTCTTATGT	C	.	PASS	AC=251;AF=0.0664901;AFR_AF=0.0479;AMR_AF=0.0649;AN=3775;CS=DEL_pindel;EAS_AF=0.0759;END=93239936;EUR_AF=0.0783;NS=2504;SAS_AF=0.071;SVTYPE=DEL	GT	0
X	93245047	BI_GS_DEL1_B1_P2991_126	T	<CN0>	100	PASS	AC=21;AF=0.00900662;AFR_AF=0.003;AMR_AF=0.0095;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0039;END=93248285;EUR_AF=0.0261;MC=EM_DL_DEL106252,YL_CN_PUR_5709,UW_VH_3632;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	93362085	ALU_umary_ALU_12714	A	<INS:ME:ALU>	.	PASS	AC=169;AF=0.0447682;AFR_AF=0.0359;AMR_AF=0.0344;AN=3775;CS=ALU_umary;EAS_AF=0.0249;EUR_AF=0.0875;MEINFO=AluUndef,17,281,-;NS=2504;SAS_AF=0.0404;SVLEN=264;SVTYPE=ALU;TSD=AAAATTTAAAAAAAAA	GT	1
X	93378325	DEL_pindel_54114	ATCCAGGACTATATCTTTTCCTTCAGTGTGGCAAGTTCCCCTAGGCCTTGGATGGATCCAGAGGTGG	A	.	PASS	AC=561;AF=0.148609;AFR_AF=0.1555;AMR_AF=0.1489;AN=3775;CS=DEL_pindel;EAS_AF=0.1348;END=93378391;EUR_AF=0.1671;NS=2504;SAS_AF=0.1337;SVTYPE=DEL	GT	1
X	93380988	ALU_umary_ALU_12715	T	<INS:ME:ALU>	.	PASS	AC=35;AF=0.00927152;AFR_AF=0.001;AMR_AF=0.0305;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0183;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.0056;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	93395877	ALU_umary_ALU_12716	C	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,1,261,+;NS=2504;SAS_AF=0;SVLEN=260;SVTYPE=ALU;TSD=null	GT	0
X	93400917	BI_GS_DEL1_B1_P2991_218	A	<CN0>	100	PASS	AC=148;AF=0.0566887;AFR_AF=0.0409;AMR_AF=0.0076;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0916;END=93404725;EUR_AF=0.0117;MC=YL_CN_BEB_3722,EM_DL_DEL106253,UW_VH_1310;NS=2504;SAS_AF=0.1253;SVTYPE=DEL	GT	.
X	93410378	DUP_gs.X_CNV_X_93410378_93418060	C	<CN0>,<CN2>	.	PASS	AC=0,4;AF=0,0.0010596;AFR_AF=0,0.002;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=93418060;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	93412420	DUP_gs.X_CNV_X_93412420_93417693	A	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0.002;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=93417693;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	93487027	BI_GS_DEL1_B5_P2991_375	A	<CN0>	100	PASS	AC=54;AF=0.116821;AFR_AF=0.1206;AMR_AF=0.124;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0.1165;END=93488017;EUR_AF=0.1188;NS=2504;SAS_AF=0.1045;SVTYPE=DEL	GT	.
X	93499017	UW_VH_6037	T	<CN0>	100	PASS	AC=39;AF=0.0691391;AFR_AF=0.0568;AMR_AF=0.063;AN=2542;CIEND=0,371;CIPOS=-268,0;CS=DEL_union;EAS_AF=0.0916;END=93500419;EUR_AF=0.0757;MC=BI_GS_DEL1_B1_P2991_279;NS=2504;SAS_AF=0.0599;SVTYPE=DEL	GT	.
X	93585400	L1_umary_LINE1_3091	G	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,290,+;NS=2504;SAS_AF=0.0014;SVLEN=289;SVTYPE=LINE1;TSD=null	GT	0
X	93671787	ALU_umary_ALU_12717	A	<INS:ME:ALU>	.	PASS	AC=13;AF=0.00344371;AFR_AF=0.012;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	93689630	ALU_umary_ALU_12719	A	<INS:ME:ALU>	.	PASS	AC=56;AF=0.0148344;AFR_AF=0.0499;AMR_AF=0.0115;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc2,9,281,-;NS=2504;SAS_AF=0;SVLEN=272;SVTYPE=ALU;TSD=null	GT	0
X	93729484	DEL_pindel_54122	AAGTTTCCTGAGGCCTCCTCAGCCCTGTGGAACTGTGAATCAATTAAACCTCTTTCCTTTATTAATTATGTGCTCTTGAGCAGTTCTTTATAGCAGCATAAGAATGAAGTAAGACATAAGCATTCTCAATACAAATAAGATAAGTATATAAAATAAAGCATAAGTTAATTAGCTGAATTCAAACATTCCACAATGTATACATGTTTCAGAACATTATGTTGTACATGATAAACACATACAATAAAAGAAAAAACAGGAAAAAAAAAACCCTTAAAATCAATGAGCTAACCCTGCCCTATCTCTAGGAATCTAGAAAGAAAGAACATTTTGAATCCAAAACATAAAGTAAGTATAGGAAAAAAAAAAAAAAACAGTAAGAGTGAAAATCAACAAATAGGGAAAGAGAGTAAGAGAATGTAACAAAAAGAGGGTTTAATGAACGATTAACAAAATTGACAAAATTCAAGCCAATGTTATCATTAATAAAGGAGAGAAGAAAAGGTTACCAATATTATGATTAAAAGTATAATAAGAAAATATTCTAAAAACTGCATACCAATACTCATGGTAATGTACAATTAAAATAGGTGTATGTTATGGTATGTTAAATGTTCTTTATGTT	A	.	PASS	AC=262;AF=0.069404;AFR_AF=0.0538;AMR_AF=0.0821;AN=3775;CS=DEL_pindel;EAS_AF=0.0746;END=93730105;EUR_AF=0.0796;NS=2504;SAS_AF=0.0655;SVTYPE=DEL	GT	0
X	93742968	DEL_pindel_54123	CTGGGCCCCTGTCTCAGATTAACAAGGTTTCCTTGGCATGTTAACTGACTCCATAATACAAATTATAAAGGTTACAAGAAGGTTTATGGAAATAATCTTATGGTCAAGATGATTAAAATCTTGTAGATTGTTTATAAGATATTGAGAGACAGATTTAATTGGCCTTGCACTGTCTTTAATAGAGGTCATTGTTTGTGAAATTGTCTGCTCTCAAAGAATAAAGGTTTTCACCTTTTTAAAAAAGAATCTTTATCACTTTGGTTAAATTAATGACTTATTTTATAATGATCTGTGATCATATTT	C	.	PASS	AC=1152;AF=0.305166;AFR_AF=0.2951;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2997;END=93743270;EUR_AF=0.2911;NS=2504;SAS_AF=0.3398;SVTYPE=DEL	GT	1
X	93878376	ALU_umary_ALU_12720	A	<INS:ME:ALU>	.	PASS	AC=8;AF=0.00211921;AFR_AF=0.008;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,3,280,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null	GT	0
X	93963860	BI_GS_DEL1_B2_P2991_448	T	<CN0>	100	PASS	AC=10;AF=0.00344371;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0;END=93971340;EUR_AF=0.0065;MC=YL_CN_IBS_4108,EM_DL_DEL106260;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	94092792	DUP_gs.X_CNV_X_94092792_94098136	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=94098136;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	94310595	DUP_gs.X_CNV_X_94310595_94347882	C	<CN0>,<CN2>	.	PASS	AC=0,5;AF=0,0.0013245;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0065;END=94347882;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	94345404	DUP_gs.X_CNV_X_94345404_94394702	C	<CN0>,<CN2>	.	PASS	AC=0,40;AF=0,0.010596;AFR_AF=0,0;AMR_AF=0,0.0592;AN=3775;CS=DUP_gs;EAS_AF=0,0.0065;END=94394702;EUR_AF=0,0.0013;MC=DUP_gs.X_CNV_X_94335813_94397650;NS=2504;SAS_AF=0,0.0042;SVTYPE=DUP	GT	0
X	94525650	YL_CN_YRI_5614	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=94551246;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	94577305	BI_GS_DEL1_B1_P2992_274	C	<CN0>	100	PASS	AC=22;AF=0.0569536;AFR_AF=0.0618;AMR_AF=0.0534;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0.0576;END=94578647;EUR_AF=0.0692;NS=2504;SAS_AF=0.039;SVTYPE=DEL	GT	.
X	94584364	ALU_umary_ALU_12721	T	<INS:ME:ALU>	.	PASS	AC=15;AF=0.00397351;AFR_AF=0.014;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	94590803	BI_GS_DEL1_B4_P2992_82	A	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-16,16;CIPOS=-16,16;CS=DEL_union;EAS_AF=0;END=94595242;EUR_AF=0.0065;MC=YL_CN_CEU_5457;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	94603608	DUP_gs.X_CNV_X_94603608_94632841	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=94632841;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	94632493	DEL_pindel_54128	GATGGCTCATTAAGCTATGTAGCAAAAATAATTTTTTTGTGCTGCTCAAGAGGTAGGTAGGACATACAAGTATAAATTTTTCCTGTTATTTCATTTTTCTTCTGATCTTTATAGGGTTTTTATCCAGTATGCGTTAGAAGGAAGTATTTCAATAAAAATCCATTTCAAAAGAATTTTTGAAAAAGTTACTGTTGACTAGTTACTTCATTAGTGAACTCTGTTTAGCCTCCTCATGTTCCAAGTGATACATAGCATTTTGGGTTTCAGAGTTACTCACCAAAATATTTTGATAGATTTTCTTTTTAAGGCAAGAGATTTTTAGAGTAAATTAACAGGCTGTGTTAGTGAAAAGACTGGAGGT	G	.	PASS	AC=1179;AF=0.312318;AFR_AF=0.3161;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.2971;END=94632853;EUR_AF=0.3068;NS=2504;SAS_AF=0.3412;SVTYPE=DEL	GT	1
X	94642277	UW_VH_22867	T	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=0,321;CIPOS=-196,0;CS=DEL_union;EAS_AF=0;END=94651588;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	94665933	ALU_umary_ALU_12722	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,10,280,-;NS=2504;SAS_AF=0.0014;SVLEN=270;SVTYPE=ALU;TSD=null	GT	0
X	94698229	BI_GS_DEL1_B3_P2992_18	G	<CN0>	100	PASS	AC=13;AF=0.00582781;AFR_AF=0.015;AMR_AF=0.0057;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=94701973;EUR_AF=0.0039;MC=UW_VH_16117,YL_CN_GWD_5904;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	94718203	BI_GS_DEL1_B4_P2992_99	A	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0;END=94728013;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	94788004	BI_GS_DEL2_B3_P0608_1	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=94988129;EUR_AF=0.0052;MC=YL_CN_GWD_5905;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	95014607	BI_GS_DEL1_B2_P2993_4	T	<CN0>	100	PASS	AC=9;AF=0.00503311;AFR_AF=0.008;AMR_AF=0.0057;AN=2542;CIEND=-48,49;CIPOS=-48,49;CS=DEL_union;EAS_AF=0.0013;END=95019687;EUR_AF=0.0091;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	95031987	BI_GS_DEL1_B3_P2993_3	T	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0;END=95037619;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	95039235	ALU_umary_ALU_12723	G	<INS:ME:ALU>	.	PASS	AC=22;AF=0.00582781;AFR_AF=0.0219;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	95050841	BI_GS_DEL1_B3_P2993_7	G	<CN0>	100	PASS	AC=1292;AF=0.526358;AFR_AF=0.3928;AMR_AF=0.6011;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3652;END=95051476;EUR_AF=0.7115;MC=UW_VH_1311;NS=2504;SAS_AF=0.6323;SVTYPE=DEL	GT	.
X	95145344	L1_umary_LINE1_3092	T	<INS:ME:LINE1>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0.004;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4895,6001,-;NS=2504;SAS_AF=0;SVLEN=1106;SVTYPE=LINE1;TSD=null	GT	0
X	95180925	DUP_gs.X_CNV_X_95180925_95188834	C	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=95188834;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	95180991	EM_DL_DEL106277	C	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0013;END=95189063;EUR_AF=0.0052;MC=BI_GS_DEL1_B2_P2993_80;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	95187026	ALU_umary_ALU_12724	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,1,276,+;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=null	GT	0
X	95275776	BI_GS_DEL1_B3_P2993_12	A	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-51,52;CIPOS=-51,52;CS=DEL_union;EAS_AF=0;END=95291113;EUR_AF=0.0039;MC=YL_CN_GIH_3466;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	95483886	DUP_gs.X_CNV_X_95483886_95504382	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=95504382;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	95537355	ALU_umary_ALU_12725	T	<INS:ME:ALU>	.	PASS	AC=298;AF=0.0789404;AFR_AF=0.2702;AMR_AF=0.0191;AN=3775;CS=ALU_umary;EAS_AF=0.0065;EUR_AF=0.0013;MEINFO=AluYa4_3,1,276,-;NS=2504;SAS_AF=0.0153;SVLEN=275;SVTYPE=ALU;TSD=TTACTATGCATATTTT	GT	0
X	95631241	ALU_umary_ALU_12726	T	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluUndef,28,275,-;NS=2504;SAS_AF=0;SVLEN=247;SVTYPE=ALU;TSD=null	GT	0
X	95775838	ALU_umary_ALU_12727	A	<INS:ME:ALU>	.	PASS	AC=16;AF=0.00423841;AFR_AF=0.013;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,4,281,+;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=AGAAATAAGATGGGA	GT	0
X	96140250	BI_GS_DEL1_B2_P2994_52	G	<CN0>	100	PASS	AC=7;AF=0.0116556;AFR_AF=0.016;AMR_AF=0.0115;AN=2542;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0.0105;END=96143095;EUR_AF=0.0131;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	96168116	L1_umary_LINE1_3093	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3919,5811,-;NS=2504;SAS_AF=0;SVLEN=1892;SVTYPE=LINE1;TSD=TTCAAATATATTGCTTTC	GT	0
X	96522261	ALU_umary_ALU_12728	A	<INS:ME:ALU>	.	PASS	AC=28;AF=0.00741722;AFR_AF=0.0249;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	96556140	UW_VH_15270	A	<CN0>	100	PASS	AC=52;AF=0.0810596;AFR_AF=0.1087;AMR_AF=0.0859;AN=2542;CIEND=0,269;CIPOS=-255,0;CS=DEL_union;EAS_AF=0.0602;END=96557208;EUR_AF=0.0744;MC=UW_VH_16360,BI_GS_DEL1_B3_P2994_22;NS=2504;SAS_AF=0.0682;SVTYPE=DEL	GT	.
X	96606710	UW_VH_11323	G	<CN0>	100	PASS	AC=40;AF=0.029404;AFR_AF=0.015;AMR_AF=0.0267;AN=2542;CIEND=0,196;CIPOS=-195,0;CS=DEL_union;EAS_AF=0.0157;END=96608737;EUR_AF=0.064;MC=YL_CN_TSI_4432,YL_CN_IBS_4111,BI_GS_DEL1_B2_P2994_249,EM_DL_DEL106293;NS=2504;SAS_AF=0.0292;SVTYPE=DEL	GT	.
X	96619122	BI_GS_DEL1_B3_P2994_25	C	<CN0>	100	PASS	AC=17;AF=0.00609272;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-16,17;CIPOS=-16,17;CS=DEL_union;EAS_AF=0;END=96623156;EUR_AF=0.0039;MC=UW_VH_15874,YL_CN_BEB_3726;NS=2504;SAS_AF=0.0237;SVTYPE=DEL	GT	.
X	96672352	YL_CN_CEU_5460	C	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=96680820;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	96707626	BI_GS_DEL1_B4_P2994_102	T	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-16,16;CIPOS=-16,16;CS=DEL_union;EAS_AF=0.0013;END=96712886;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	96763369	DUP_gs.X_CNV_X_96763369_96831761	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=96831761;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	96784800	ALU_umary_ALU_12729	A	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	96958277	UW_VH_15451	T	<CN0>	100	PASS	AC=13;AF=0.015894;AFR_AF=0.01;AMR_AF=0.0153;AN=2542;CIEND=0,190;CIPOS=-216,0;CS=DEL_union;EAS_AF=0.017;END=96960074;EUR_AF=0.0209;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	.
X	96970300	BI_GS_DEL1_B4_P2994_131	A	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-50,51;CIPOS=-50,51;CS=DEL_union;EAS_AF=0.0013;END=96987034;EUR_AF=0.0052;MC=YL_CN_CHB_4701;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	96995240	ALU_umary_ALU_12730	A	<INS:ME:ALU>	.	PASS	AC=54;AF=0.0143046;AFR_AF=0.0538;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,7,281,-;NS=2504;SAS_AF=0;SVLEN=274;SVTYPE=ALU;TSD=CACCTGTTTTA	GT	0
X	97063505	BI_GS_DEL1_B2_P2995_28	A	<CN0>	100	PASS	AC=130;AF=0.164503;AFR_AF=0.1366;AMR_AF=0.1718;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.1453;END=97064183;EUR_AF=0.2023;MC=UW_VH_2854;NS=2504;SAS_AF=0.1783;SVTYPE=DEL	GT	.
X	97145634	UW_VH_9183	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,160;CIPOS=-189,0;CS=DEL_union;EAS_AF=0;END=97151223;EUR_AF=0.0039;MC=BI_GS_DEL1_B1_P2995_95;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	97167898	BI_GS_DEL1_B5_P2995_159	T	<CN0>	100	PASS	AC=385;AF=0.330596;AFR_AF=0.35;AMR_AF=0.3302;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.3272;END=97168315;EUR_AF=0.3264;NS=2504;SAS_AF=0.312;SVTYPE=DEL	GT	.
X	97278651	BI_GS_DEL1_B2_P2995_139	G	<CN0>	100	PASS	AC=5;AF=0.00291391;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-39,39;CIPOS=-39,39;CS=DEL_union;EAS_AF=0.0013;END=97281779;EUR_AF=0.0052;MC=YL_CN_IBS_4112;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	97365889	DEL_pindel_54150	ATCTCACTAGAATGTATCAAAAAGATCTTTACTGTATGTCAATGAAACCTTCACAGAATACCTTACAGAATGAGAAAGAAAGAACGTACAAATATTTGATGTCCCTACCATATGCCAGGCCTCATGCTTGCTACTTTATATATGTGTGATCTCTCCCTAATCTTCATAACAGCACTATGAAAACAAGAAAGTACTGGTTTAGAGTGGTTCTGTGTTTCATCCAATTCTGCCACTTACTATGTACGTACCACTGAACTTAGGACTCCAATAGAATCAACTCAGGCATACTTCCCTAGCCACAATTAGGAAAATTAATGAACACTGAAAACTGGAGATGGTTAGAGGAACCTCCTTAGCTACTCAGAGTTGTTCCCCATGATCTTTTCAGTCTGTTTTCAGAAACTTGCTTCATTATCAGAAAACTGCTCTGTATGCACAGCTTCTCTGAATGTGTCCTTCATTTACTTATCTAACCTGAAATTTGGTAGTTCCTAAAAAATTCTTTCTTTTTCTTGCTAGCATCTCAAGTGGACATTGTTTTGTTTTCCTTTCATAATCCAGGTAACTCAGAAGTTGAAATTGGTATCTTCCTTGTTCCTCAATATTACTTATAGACATTTGCTTCTCCTCCCTCTTGCTAAAACCCCTGTTTCTATTAGGATCACATAGTCATTATAGCTTGCCTCTTTTTCAATAGCATTAACCTGGAAAAATTTGAATCTAAATGATCAG	A	.	PASS	AC=217;AF=0.0574834;AFR_AF=0.0568;AMR_AF=0.0954;AN=3775;CS=DEL_pindel;EAS_AF=0.0288;END=97366620;EUR_AF=0.0666;NS=2504;SAS_AF=0.0515;SVTYPE=DEL	GT	0
X	97379824	DEL_pindel_54151	GATGTCCTCTCACTTATTGTTGCTATCTTTAATTTCAACAAATGTTTTGTACTTTTGCGTATGCAA	G	.	PASS	AC=525;AF=0.139073;AFR_AF=0.1306;AMR_AF=0.1393;AN=3775;CS=DEL_pindel;EAS_AF=0.1702;END=97379889;EUR_AF=0.1397;NS=2504;SAS_AF=0.117;SVTYPE=DEL	GT	0
X	97811557	UW_VH_11949	C	<CN0>	100	PASS	AC=25;AF=0.0611921;AFR_AF=0.0728;AMR_AF=0.0534;AN=2542;CIEND=0,251;CIPOS=-272,0;CS=DEL_union;EAS_AF=0.055;END=97812881;EUR_AF=0.0627;MC=BI_GS_DEL1_B5_P2995_687;NS=2504;SAS_AF=0.0557;SVTYPE=DEL	GT	.
X	97842864	ALU_umary_ALU_12731	C	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,7,281,-;NS=2504;SAS_AF=0;SVLEN=274;SVTYPE=ALU;TSD=null	GT	0
X	97938639	BI_GS_DEL1_B5_P2995_791	C	<CN0>	100	PASS	AC=4;AF=0.0124503;AFR_AF=0.015;AMR_AF=0.0057;AN=2542;CIEND=-16,17;CIPOS=-16,17;CS=DEL_union;EAS_AF=0.0157;END=97940652;EUR_AF=0.0117;NS=2504;SAS_AF=0.0111;SVTYPE=DEL	GT	.
X	98013275	BI_GS_DEL1_B2_P2996_12	T	<CN0>	100	PASS	AC=10;AF=0.00317881;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.0079;END=98017816;EUR_AF=0.0026;MC=UW_VH_6992;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	98111872	BI_GS_DEL1_B3_P2996_5	A	<CN0>	100	PASS	AC=7;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-18,19;CIPOS=-18,19;CS=DEL_union;EAS_AF=0;END=98116683;EUR_AF=0.0091;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	98225074	ALU_umary_ALU_12732	C	<INS:ME:ALU>	.	PASS	AC=41;AF=0.0108609;AFR_AF=0;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0431;MEINFO=AluYc1,1,279,-;NS=2504;SAS_AF=0.0042;SVLEN=278;SVTYPE=ALU;TSD=CATAGCTCATTTTTC	GT	0
X	98262844	BI_GS_DEL1_B3_P2996_9	T	<CN0>	100	PASS	AC=19;AF=0.00768212;AFR_AF=0.0169;AMR_AF=0;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0039;END=98267009;EUR_AF=0.0104;MC=YL_CN_GWD_5908,UW_VH_14838,EM_DL_DEL106316;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	98264302	L1_umary_LINE1_3094	T	<INS:ME:LINE1>	.	PASS	AC=802;AF=0.21245;AFR_AF=0.4347;AMR_AF=0.2099;AN=3775;CS=L1_umary;EAS_AF=0.0327;EUR_AF=0.2507;MEINFO=LINE1,3598,6011,-;NS=2504;SAS_AF=0.0543;SVLEN=2413;SVTYPE=LINE1;TSD=GGTACTTATTCTT	GT	0
X	98617505	DUP_gs.X_CNV_X_98617505_98620548	A	<CN0>,<CN2>	.	PASS	AC=9,3;AF=0.00238411,0.0007947;AFR_AF=0.008,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=98620548;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0.0028;SVTYPE=CNV	GT	0
X	98617516	BI_GS_DEL1_B3_P2996_20	A	<CN0>	100	PASS	AC=11;AF=0.00609272;AFR_AF=0.012;AMR_AF=0.0019;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0039;END=98620599;EUR_AF=0.0091;MC=EM_DL_DEL106324,UW_VH_14109,YL_CN_YRI_5618;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	98621706	DEL_pindel_54159	AAGAAGTTGAATCCCTGAATAGATCAATAACAAGTTCTGAAATCAAGGCAGTAATTAATAGCCTCCAGT	A	.	PASS	AC=1120;AF=0.296689;AFR_AF=0.2951;AMR_AF=0.2672;AN=3775;CS=DEL_pindel;EAS_AF=0.2893;END=98621774;EUR_AF=0.2911;NS=2504;SAS_AF=0.3343;SVTYPE=DEL	GT	1
X	98684605	YL_CN_IBS_4113	A	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=98814968;EUR_AF=0.0065;MC=BI_GS_DEL2_B2_P0609_1,BI_GS_DEL2_B3_P0609_1,YL_CN_GWD_5910,UW_VH_15566;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	98760378	DEL_pindel_54164	TTGAATGAATGCCTCTGTCATAGAATCTGAAGACTTTTCACATTATGTATTTATGAGAAGTAACCTATACCTAACCTCCTTCTTCATTCACCTATAAAGATAGATTAATATCGTTAGTCAAGTGGCATTTTTTCTATAATTAAAATAACATTTCAGTAAAGATAAATTTATAATTATATGCTCCTATTGGAATTGATAAGTAGTACTTTAGTATTGGAAATGTGAAAACAA	T	.	PASS	AC=582;AF=0.154172;AFR_AF=0.1505;AMR_AF=0.145;AN=3775;CS=DEL_pindel;EAS_AF=0.1374;END=98760608;EUR_AF=0.1397;NS=2504;SAS_AF=0.1992;SVTYPE=DEL	GT	1
X	98785810	BI_GS_DEL1_B2_P2996_368	T	<CN0>	100	PASS	AC=45;AF=0.0368212;AFR_AF=0.0199;AMR_AF=0.0153;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.089;END=98787896;EUR_AF=0.0431;MC=UW_VH_5702,YL_CN_JPT_4750;NS=2504;SAS_AF=0.0139;SVTYPE=DEL	GT	.
X	98793108	DEL_pindel_54167	ATCACCTTCCCCCAGATCAACATAGAGATAAAAGGCACAATTTCCCAGTTCTCAGCTTCTTCCTGGAGATGGAAAGATTGGAGCAGAGTGTCTAATGATGCACCTTC	A	.	PASS	AC=749;AF=0.198411;AFR_AF=0.1874;AMR_AF=0.2023;AN=3775;CS=DEL_pindel;EAS_AF=0.2029;END=98793214;EUR_AF=0.2102;NS=2504;SAS_AF=0.1936;SVTYPE=DEL	GT	1
X	98810839	UW_VH_21878	G	<CN0>	100	PASS	AC=8;AF=0.0262252;AFR_AF=0.0249;AMR_AF=0.0267;AN=2542;CIEND=0,110;CIPOS=-97,0;CS=DEL_union;EAS_AF=0.0249;END=98812807;EUR_AF=0.0326;MC=BI_GS_DEL1_B5_P2996_562;NS=2504;SAS_AF=0.0223;SVTYPE=DEL	GT	.
X	99123367	L1_umary_LINE1_3095	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5509,6019,+;NS=2504;SAS_AF=0;SVLEN=510;SVTYPE=LINE1;TSD=AAAAATTTTAGGACTT	GT	0
X	99242032	ALU_umary_ALU_12733	T	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	99285552	UW_VH_22025	T	<CN0>	100	PASS	AC=26;AF=0.0635762;AFR_AF=0.0648;AMR_AF=0.0515;AN=2542;CIEND=0,219;CIPOS=-138,0;CS=DEL_union;EAS_AF=0.0654;END=99287068;EUR_AF=0.0718;MC=BI_GS_DEL1_B5_P2997_206;NS=2504;SAS_AF=0.0599;SVTYPE=DEL	GT	.
X	99436064	DEL_pindel_54175	GGAAGGCCATATATATATATATATATATATATATATGTATCTCCTAATAGTTCT	G	.	PASS	AC=1035;AF=0.274172;AFR_AF=0.2742;AMR_AF=0.2844;AN=3775;CS=DEL_pindel;EAS_AF=0.2618;END=99436117;EUR_AF=0.2611;NS=2504;SAS_AF=0.2939;SVTYPE=DEL	GT	0
X	99505153	BI_GS_DEL1_B1_P2997_307	C	<CN0>	100	PASS	AC=5;AF=0.00450331;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0013;END=99507489;EUR_AF=0.0078;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	99510840	UW_VH_1313	C	<CN0>	100	PASS	AC=1262;AF=0.511788;AFR_AF=0.0758;AMR_AF=0.458;AN=2542;CIEND=0,317;CIPOS=-434,0;CS=DEL_union;EAS_AF=0.8521;END=99512856;EUR_AF=0.4948;MC=BI_GS_DEL1_B2_P2997_227,YL_CN_CDX_3868,YL_CN_FIN_4333,YL_CN_JPT_4751;NS=2504;SAS_AF=0.8162;SVTYPE=DEL	GT	.
X	99802682	DEL_pindel_54180	CCAAGAGCAAACCAAAACCAAAATTAGTAGAAGAAAAGAAATCATAAGGATCAGAG	C	.	PASS	AC=984;AF=0.260662;AFR_AF=0.2532;AMR_AF=0.2519;AN=3775;CS=DEL_pindel;EAS_AF=0.2487;END=99802737;EUR_AF=0.265;NS=2504;SAS_AF=0.2855;SVTYPE=DEL	GT	1
X	99880024	DEL_pindel_54183	ATGTTGGTCAGGCTACTCTCGAACTCCCGACCTCAGATGATCTGCCTGCCTTGGCCTCTCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACC	A	.	PASS	AC=1036;AF=0.274437;AFR_AF=0.2572;AMR_AF=0.2615;AN=3775;CS=DEL_pindel;EAS_AF=0.267;END=99880118;EUR_AF=0.2807;NS=2504;SAS_AF=0.3092;SVTYPE=DEL	GT	0
X	100006797	BI_GS_DEL1_B1_P2998_3	G	<CN0>	100	PASS	AC=6;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0.0013;END=100010311;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	100110945	UW_VH_25091	G	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,68;CIPOS=-68,0;CS=DEL_union;EAS_AF=0;END=100143035;EUR_AF=0.0065;MC=UW_VH_25042;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	100297960	BI_GS_DEL1_B4_P2998_46	T	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-25,25;CIPOS=-25,25;CS=DEL_union;EAS_AF=0;END=100304194;EUR_AF=0.0039;MC=YL_CN_CEU_5462;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	100342156	YL_CN_JPT_4753	G	<CN0>	100	PASS	AC=4;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=100348677;EUR_AF=0.0026;MC=UW_VH_21694;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	100421325	DEL_pindel_54185	GGTAGAGATGGGGTTTCATCATGTTGGCCAGGATGGTCTTGATCTCTTGACCTCGGGATCCACCCGTCTCGGCCTCCCGAAGTGTTGGGATTACAGGCATGAGCCACCGTGCCCAGCCCTCTTTTAATTTTTTAACTCACTTAAGATTATATGGCAGTGCAAATAAGCCAAATGTAGTTATCTGAAAACATATTTTTTGAAGATTCTTCATGGCAAAAACCATAATAGTTAAATAAAGAATAGCTATTTTGCTTTGGTGCAAAACATGTCTAGAAGATAAAAGAAATGGAAAATTTGGTTTATTATTGCAGTTGTAAAAAAGTATTTTCTTTACCCAGTGTTTGTGTAGAATTGGTGGCATTATTAATATTGACTTAATGTTCAATACTAAAGAATACTAAAGTTGCTATTAGAGTTCTAACATATTTTTCCTTTTGTTTTTTGAGACGGAGTCTTACTCTGTTGCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGACTCCCTGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACATGCCACCACACCCAGCTAATTTTTGTGTTTTTA	G	.	PASS	AC=650;AF=0.172185;AFR_AF=0.1426;AMR_AF=0.2099;AN=3775;CS=DEL_pindel;EAS_AF=0.1571;END=100421929;EUR_AF=0.1841;NS=2504;SAS_AF=0.1894;SVTYPE=DEL	GT	1
X	100566274	UW_VH_3613	G	<CN0>	100	PASS	AC=190;AF=0.227815;AFR_AF=0.1994;AMR_AF=0.2252;AN=2542;CIEND=0,322;CIPOS=-376,0;CS=DEL_union;EAS_AF=0.2762;END=100567622;EUR_AF=0.2428;MC=BI_GS_DEL1_B3_P2998_14;NS=2504;SAS_AF=0.2019;SVTYPE=DEL	GT	.
X	100566804	YL_CN_ITU_4727	A	<CN0>	100	PASS	AC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=100586945;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	100678121	UW_VH_5774	C	<CN0>	100	PASS	AC=8;AF=0.00768212;AFR_AF=0.009;AMR_AF=0.0057;AN=2542;CIEND=0,415;CIPOS=-427,0;CS=DEL_union;EAS_AF=0.0118;END=100680576;EUR_AF=0.0065;MC=YL_CN_CDX_3869;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	100833020	DEL_pindel_54186	GCTTCTATCATAAAATGATGTTGGATTTTACTAAAAGCTTTTCCCACATCTATTGAGATGATCATATGGTTTTTGTTTTTAATTCTCTTTATGTGGTGAATCACATTTATTGATTTGTGTATGTTGAACAAACCTTATACCCCAGGAATTGAGCCTACTTGATCCTGGTTAATTTTCTTTTTGATGTGTTGCTAGATTCAGTTTGCTAGTATTTTGCTGAGGATTTTTTCATCTATGTTCATCAGGGATATTAGCCTGTCATTTTCTTTTTTCATTCTGTCTTTGCCAGCTTTGGTACCAGGATGATACTGGCTTTGTAGAATGAGTTATGGAGGAGTCCCTCCTCCTTAATTTTCAGGAATAGTTTTAGTAGGATTGGTACTAGTTCCTCCTTGTACATCTGATAGAATATGGCTGTGAATCCATCTGGTCCAGGACTTTTTTGGCAGTAGTTTTTTTTTTTAATGACTGATTCAATTTCAGAACTCATTATTGATATGTTCAGGGTTTCAATTTCTTCCTGGTTCAAACTTGATAGGTTGTGTTTCCAATAGTGTATCCATTCCCTCTGGATTTTCTAGTTCGTGTGCATAGAGGTTTTCATAATAGTCTCTGAGGATGTTTTGTTTTTTTTTTGGTGGGATTGGTTGTAATGT	G	.	PASS	AC=741;AF=0.196291;AFR_AF=0.1864;AMR_AF=0.1832;AN=3775;CS=DEL_pindel;EAS_AF=0.2173;END=100833675;EUR_AF=0.1867;NS=2504;SAS_AF=0.2075;SVTYPE=DEL	GT	0
X	100986014	BI_GS_DEL1_B2_P2998_387	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-42,43;CIPOS=-42,43;CS=DEL_union;EAS_AF=0;END=100990225;EUR_AF=0.0052;MC=YL_CN_ACB_5119;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	101055330	DUP_gs.X_CNV_X_101055330_101067156	C	<CN0>,<CN2>	.	PASS	AC=0,31;AF=0,0.00821192;AFR_AF=0,0.004;AMR_AF=0,0.0115;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=101067156;EUR_AF=0,0.0261;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	101155257	DEL_pindel_54191	GTGCAAAAGCTCTTTAGTTTAATTAGGTCTCAGCTATTTATCTTTGTTCTTAT	G	.	PASS	AC=1965;AF=0.52053;AFR_AF=0.674;AMR_AF=0.479;AN=3775;CS=DEL_pindel;EAS_AF=0.3848;END=101155309;EUR_AF=0.5627;NS=2504;SAS_AF=0.4359;SVTYPE=DEL	GT	1
X	101293973	ALU_umary_ALU_12734	G	<INS:ME:ALU>	.	PASS	AC=98;AF=0.0259603;AFR_AF=0.0508;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0.0432;EUR_AF=0.0013;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0111;SVLEN=280;SVTYPE=ALU;TSD=AAAAAGCTTATCCACCACG	GT	0
X	101304548	UW_VH_21600	A	<CN0>	100	PASS	AC=46;AF=0.0964238;AFR_AF=0.0947;AMR_AF=0.0897;AN=2542;CIEND=0,295;CIPOS=-251,0;CS=DEL_union;EAS_AF=0.072;END=101307092;EUR_AF=0.1266;NS=2504;SAS_AF=0.0975;SVTYPE=DEL	GT	.
X	101359486	DEL_pindel_54197	TGTTTGTTGCCATTGCTTTTGGTGTTTTAGTCATGAAGTCTTTGCCCATGTCTATGTCCTGAATG	T	.	PASS	AC=1141;AF=0.302252;AFR_AF=0.3101;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2932;END=101359550;EUR_AF=0.2898;NS=2504;SAS_AF=0.3217;SVTYPE=DEL	GT	1
X	101364523	L1_umary_LINE1_3096	T	<INS:ME:LINE1>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=LINE1,4159,5360,-;NS=2504;SAS_AF=0;SVLEN=1201;SVTYPE=LINE1;TSD=null	GT	0
X	101439260	L1_umary_LINE1_3097	A	<INS:ME:LINE1>	.	PASS	AC=63;AF=0.0166887;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0576;EUR_AF=0;MEINFO=LINE1,4502,6007,+;NS=2504;SAS_AF=0.0251;SVLEN=1505;SVTYPE=LINE1;TSD=AAAACAAA	GT	0
X	101832232	DUP_gs.X_CNV_X_101832232_101846317	T	<CN0>,<CN2>	.	PASS	AC=2,3;AF=0.0005298,0.0007947;AFR_AF=0.002,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=101846317;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0042;SVTYPE=CNV	GT	0
X	101833724	DUP_gs.X_CNV_X_101833724_101843776	A	<CN0>,<CN2>	.	PASS	AC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=101843776;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0042;SVTYPE=DUP	GT	0
X	101958881	BI_GS_DEL1_B3_P2999_19	G	<CN0>	100	PASS	AC=4;AF=0.00503311;AFR_AF=0.006;AMR_AF=0.0038;AN=2542;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0.0039;END=101961314;EUR_AF=0.0091;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	102256681	DUP_gs.X_CNV_X_102256681_102267528	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=102267528;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	102272013	BI_GS_DEL1_B3_P3000_8	T	<CN0>	100	PASS	AC=7;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0.0013;END=102277302;EUR_AF=0.0039;MC=YL_CN_ITU_4728;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	102277916	UW_VH_10691	A	<CN0>	100	PASS	AC=10;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0095;AN=2542;CIEND=0,148;CIPOS=-165,0;CS=DEL_union;EAS_AF=0.0026;END=102283742;EUR_AF=0.0039;MC=YL_CN_CLM_3894;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	102333184	DUP_gs.X_CNV_X_102333184_102383738	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=102383738;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	102363189	L1_umary_LINE1_3098	A	<INS:ME:LINE1>	.	PASS	AC=594;AF=0.157351;AFR_AF=0.016;AMR_AF=0.1431;AN=3775;CS=L1_umary;EAS_AF=0.144;EUR_AF=0.2585;MEINFO=LINE1,5165,6018,+;NS=2504;SAS_AF=0.2716;SVLEN=853;SVTYPE=LINE1;TSD=AAAAGATAAAACTACA	GT	0
X	102625247	ALU_umary_ALU_12735	T	<INS:ME:ALU>	.	PASS	AC=29;AF=0.00768212;AFR_AF=0;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0.0314;EUR_AF=0;MEINFO=AluYe5,1,265,-;NS=2504;SAS_AF=0.0028;SVLEN=264;SVTYPE=ALU;TSD=GTACTAAAATATTTCT	GT	0
X	102692005	ALU_umary_ALU_12736	T	<INS:ME:ALU>	.	PASS	AC=189;AF=0.0500662;AFR_AF=0.1785;AMR_AF=0.0191;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CTTCTCAGCGTTTTTTATT	GT	0
X	102778753	YL_CN_JPT_4755	C	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=102786357;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	102780054	L1_umary_LINE1_3099	T	<INS:ME:LINE1>	.	PASS	AC=68;AF=0.0180133;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.089;EUR_AF=0;MEINFO=LINE1,4878,6019,+;NS=2504;SAS_AF=0;SVLEN=1141;SVTYPE=LINE1;TSD=TAAAAGTGACAGTAGTT	GT	0
X	102808947	BI_GS_DEL1_B5_P3000_651	G	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=102826414;EUR_AF=0.0091;MC=YL_CN_GIH_3471,UW_VH_19750;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	102856671	BI_GS_DEL1_B2_P3000_423	C	<CN0>	100	PASS	AC=48;AF=0.0246358;AFR_AF=0.0618;AMR_AF=0.0267;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0079;END=102858731;EUR_AF=0.0091;MC=UW_VH_9391;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	102862592	L1_umary_LINE1_3100	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,3317,5719,+;NS=2504;SAS_AF=0;SVLEN=2402;SVTYPE=LINE1;TSD=null	GT	0
X	103166571	ALU_umary_ALU_12737	C	<INS:ME:ALU>	.	PASS	AC=91;AF=0.024106;AFR_AF=0.0877;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluYb8,5,281,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=TCCTC	GT	0
X	103171518	DUP_gs.X_CNV_X_103171518_103211637	G	<CN0>,<CN2>	.	PASS	AC=0,13;AF=0,0.00344371;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=103211637;EUR_AF=0,0.0104;NS=2504;SAS_AF=0,0.0042;SVTYPE=DUP	GT	0
X	103261177	DUP_gs.X_CNV_X_103261177_103301346	C	<CN0>,<CN2>	.	PASS	AC=0,59;AF=0,0.0156291;AFR_AF=0,0.002;AMR_AF=0,0.0172;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=103301346;EUR_AF=0,0.0522;NS=2504;SAS_AF=0,0.0111;SVTYPE=DUP	GT	2
X	103402414	DEL_pindel_54216	GATTGCCCTGTTCTCTCCAGGCTGAGGCTGTAATACCTGATTCTAGGGACTGCTGATATGGAAATTACTACCACTCTGGCTGGAGTCAGAAGAGTATATTAAAGAGTCTCTTTGTACTGTCCTAAAATAAGCAAAATCCAACGTTTGCAGTTCTATGGACCACGCACTATGATAAGTGCTTTAAACCCATTTTGTTGTTATTGCTTCATCCTCACAATAGCCCTTTGCTGGTTCTTAAGTGTATTACCCTTTCCTGTCCTCTTTGTCTGCTTAAAGCAGCTAAGAAAACTCAGATTAGTCAGATTGCATATAAATCAATAACTTGCCCACGGTCACAGAGCTAATAACAAATAGAGCCAAGACTTAAACTCAGATACATTCAGATGTGTCTTGGTATTTCTCAAATATCACTGAGAAAAAGGCCACCATAAATTCTTTTCAAGTGCTCTCTCTCCCCCAACTCCCCACCCCAAGAATTGCCTGAATGCCCATACAGAAAGACTAGGTTCTCTTCAGAAGCAGAAGGGCAGAACCCACTAAGGCAAAGATCTCTCCCTTGAAGGCTGGCAGCCAAGGAGGTGACTATAGTAGGAATTGGCATAACCAGCTCACTC	G	.	PASS	AC=682;AF=0.180662;AFR_AF=0.1017;AMR_AF=0.2156;AN=3775;CS=DEL_pindel;EAS_AF=0.212;END=103403027;EUR_AF=0.1997;NS=2504;SAS_AF=0.2117;SVTYPE=DEL	GT	1
X	103468249	DEL_pindel_54217	ACCATGCCAGGCCTAATTTATTATATATTAATTAAGCGTTGGCTGATCAAGGCAGCTTGGCCGGGCAG	A	.	PASS	AC=836;AF=0.221457;AFR_AF=0.1884;AMR_AF=0.2366;AN=3775;CS=DEL_pindel;EAS_AF=0.2186;END=103468316;EUR_AF=0.2272;NS=2504;SAS_AF=0.2535;SVTYPE=DEL	GT	1
X	103558687	DEL_pindel_54219	AGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTTAGGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTAGGATTACAGGCTTGAGCCACTGAGCCTGGCTAATTTTTTTTTTTTTTTTTTGTAGAGTCTGGGTTTTGCTGTGTTACCGAGGCTGGTCTCAAACTCCTGGACCCAAATGGCCTGCCTGCCTTGGCCTCCCAAAGCGTTGGGATTACAGGCGTGACCCACCTTGCCCTGCCTGTTTCTTTCTTTATTTTTTTCTTTCTTTTCTTTTTCTTTTTTTTTTT	A	.	PASS	AC=1062;AF=0.281325;AFR_AF=0.2682;AMR_AF=0.2729;AN=3775;CS=DEL_pindel;EAS_AF=0.2801;END=103558990;EUR_AF=0.2624;NS=2504;SAS_AF=0.3273;SVTYPE=DEL	GT	1
X	103608577	BI_GS_DEL1_B1_P3001_349	A	<CN0>	100	PASS	AC=85;AF=0.0553642;AFR_AF=0.1296;AMR_AF=0.0324;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0236;END=103610573;EUR_AF=0.0352;MC=YL_CN_ACB_5121,UW_VH_9152,YL_CN_GWD_5914,YL_CN_ESN_4471;NS=2504;SAS_AF=0.0237;SVTYPE=DEL	GT	.
X	103851252	BI_GS_DEL1_B2_P3001_384	C	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-6,6;CIPOS=-6,6;CS=DEL_union;EAS_AF=0.0052;END=103858785;EUR_AF=0.0039;MC=EM_DL_DEL106471,YL_CN_KHV_5060;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	104043583	UW_VH_24018	A	<CN0>	100	PASS	AC=73;AF=0.111788;AFR_AF=0.1097;AMR_AF=0.1336;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.089;END=104044601;EUR_AF=0.1084;NS=2504;SAS_AF=0.1267;SVTYPE=DEL	GT	.
X	104070748	YL_CN_PUR_5717	A	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=104084901;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	104186065	DUP_gs.X_CNV_X_104186065_104192446	T	<CN0>,<CN2>	.	PASS	AC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=104192446;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	104261023	BI_GS_DEL1_B4_P3002_46	C	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0013;END=104268501;EUR_AF=0.0052;MC=YL_CN_CHB_4704;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	104362703	L1_umary_LINE1_3101	T	<INS:ME:LINE1>	.	PASS	AC=13;AF=0.00344371;AFR_AF=0.012;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5618,6010,-;NS=2504;SAS_AF=0;SVLEN=392;SVTYPE=LINE1;TSD=null	GT	0
X	104389059	UW_VH_17021	A	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=0,246;CIPOS=-210,0;CS=DEL_union;EAS_AF=0.0013;END=104394627;EUR_AF=0.0039;MC=YL_CN_YRI_5621,BI_GS_DEL1_B4_P3002_62;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	104521995	BI_GS_DEL1_B2_P3002_246	C	<CN0>	100	PASS	AC=318;AF=0.30755;AFR_AF=0.3111;AMR_AF=0.2996;AN=2542;CIEND=-32,33;CIPOS=-32,33;CS=DEL_union;EAS_AF=0.2906;END=104522481;EUR_AF=0.329;NS=2504;SAS_AF=0.3036;SVTYPE=DEL	GT	.
X	104522103	DEL_pindel_54225	TCTCCTTTTCTGGATGACCCTGGCCTTTCCTAGCCTACCCAGCCCACCCTGGATGACATCTTTGTCTCTTATCTGCCTCTTTTAAATGTTTCAATGACCTGTTTTCTCTGCAGCTCATCTCCTCAGATCCTTGCTTTCTCCTGGGGTTAATCTAATGTCTCAATGAGCTAAAAAATTCATGACTGATAAAGACCAAAAATGCTTCTCTTCTCAGCTAACATATTTGCAATTTAATAGATATTTCAATTCTGTAACTCATAGGCATAACTAATGGTGGGAATTTCTGGGGACTTTGCAGGGCCTGTGGGGGGCATTTCCCAGAGTGTCACAATCTACCCTGCAGGTGGCTGCTTGTTCCTTCTAGAAACAAGGTCAACAATATTCATGACCTTGGGGAACTAGAAGAAAAAAAATCCTACTGAGGATCACTGAAAAAAAAAGGGCCTTGGATGTCAGTCCATAGAGTGA	T	.	PASS	AC=1100;AF=0.291391;AFR_AF=0.2881;AMR_AF=0.2863;AN=3775;CS=DEL_pindel;EAS_AF=0.2749;END=104522570;EUR_AF=0.2689;NS=2504;SAS_AF=0.3412;SVTYPE=DEL	GT	1
X	104573805	UW_VH_19495	A	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,234;CIPOS=-230,0;CS=DEL_union;EAS_AF=0;END=104587772;EUR_AF=0.0052;MC=YL_CN_ITU_4730;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	104740122	L1_umary_LINE1_3102	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5,5497,-;NS=2504;SAS_AF=0.0014;SVLEN=5492;SVTYPE=LINE1;TSD=null	GT	0
X	104773532	ALU_umary_ALU_12738	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,15,281,-;NS=2504;SAS_AF=0;SVLEN=266;SVTYPE=ALU;TSD=null	GT	0
X	104775072	ALU_umary_ALU_12739	C	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,1,280,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	104784764	DEL_pindel_54229	ATATATATATATATATATAATATAAATATATTAGTTATATAATATATACATATATTATATATGATATATAATACATACATATATTATATATGATATATAATACATACATATATTATATATGATATATAATACATACATATATTATATATGATATATAATATATACATATATTATATATGATATATAAATATAGATTATATGTTAGAT	A	.	PASS	AC=1013;AF=0.268344;AFR_AF=0.2672;AMR_AF=0.2557;AN=3775;CS=DEL_pindel;EAS_AF=0.2762;END=104784970;EUR_AF=0.2702;NS=2504;SAS_AF=0.2688;SVTYPE=DEL	GT	0
X	104898178	ALU_umary_ALU_12740	T	<INS:ME:ALU>	.	PASS	AC=229;AF=0.0606623;AFR_AF=0.2173;AMR_AF=0.021;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=GCTTAAATCTTTT	GT	0
X	105116098	UW_VH_15906	A	<CN0>	100	PASS	AC=7;AF=0.0100662;AFR_AF=0.003;AMR_AF=0.0134;AN=2542;CIEND=0,145;CIPOS=-282,0;CS=DEL_union;EAS_AF=0.0065;END=105118222;EUR_AF=0.0209;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	105191156	DEL_pindel_54236	TGAAATACGGTGCAACACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTCCTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAGAAA	T	.	PASS	AC=1933;AF=0.512053;AFR_AF=0.659;AMR_AF=0.4237;AN=3775;CS=DEL_pindel;EAS_AF=0.4372;END=105191459;EUR_AF=0.4648;MEINFO=AluYa5,10,281,+;NS=2504;SAS_AF=0.5014;SVTYPE=DEL_ALU	GT	1
X	105204383	UW_VH_10049	A	<CN0>	100	PASS	AC=19;AF=0.0129801;AFR_AF=0.0219;AMR_AF=0.0153;AN=2542;CIEND=0,88;CIPOS=-228,0;CS=DEL_union;EAS_AF=0.0079;END=105208538;EUR_AF=0.0091;MC=BI_GS_DEL1_B3_P3003_15,YL_CN_MSL_4076;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	.
X	105268272	DUP_gs.X_CNV_X_105268272_105333165	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105333165;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	105330783	DUP_gs.X_CNV_X_105330783_105356257	A	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0.0019,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105356257;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	105334340	DEL_pindel_54238	TGAGCTCCTGATACAAAACTCATTTAAAAAATTAAAAATGTTACATTAGAAAATATTCACTTAATGCAAAAGAAGACA	T	.	PASS	AC=1748;AF=0.463046;AFR_AF=0.4955;AMR_AF=0.4714;AN=3775;CS=DEL_pindel;EAS_AF=0.4267;END=105334417;EUR_AF=0.3747;NS=2504;SAS_AF=0.5446;SVTYPE=DEL	GT	1
X	105347808	DUP_gs.X_CNV_X_105347808_105402983	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105402983;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	105462699	DUP_gs.X_CNV_X_105462699_105598337	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105598337;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	105477495	UW_VH_16746	A	<CN0>	100	PASS	AC=152;AF=0.201589;AFR_AF=0.2044;AMR_AF=0.1641;AN=2542;CIEND=0,253;CIPOS=-222,0;CS=DEL_union;EAS_AF=0.1911;END=105478143;EUR_AF=0.2245;MC=BI_GS_DEL1_B4_P3003_70;NS=2504;SAS_AF=0.2117;SVTYPE=DEL	GT	.
X	105521386	UW_VH_18988	T	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=0,115;CIPOS=-91,0;CS=DEL_union;EAS_AF=0.0013;END=105530857;EUR_AF=0.0052;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	105522241	DUP_gs.X_CNV_X_105522241_105528799	A	<CN0>,<CN2>	.	PASS	AC=2,4;AF=0.0005298,0.0010596;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=105528799;EUR_AF=0,0.0013;NS=2504;SAS_AF=0.0014,0.0014;SVTYPE=CNV	GT	0
X	105543271	DUP_gs.X_CNV_X_105543271_105553792	A	<CN0>,<CN2>	.	PASS	AC=1,7;AF=0.0002649,0.0018543;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0052;END=105553792;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	105581887	BI_GS_DEL1_B1_P3003_332	T	<CN0>	100	PASS	AC=211;AF=0.230199;AFR_AF=0.2233;AMR_AF=0.2309;AN=2542;CIEND=-62,62;CIPOS=-62,62;CS=DEL_union;EAS_AF=0.2709;END=105582752;EUR_AF=0.2245;NS=2504;SAS_AF=0.2019;SVTYPE=DEL	GT	.
X	105614764	DUP_gs.X_CNV_X_105614764_105629757	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105629757;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	105633238	DUP_gs.X_CNV_X_105633238_105765456	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105765456;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	105661482	DEL_pindel_54242	CACACACACACACTATATATATATATATATATATATATATATATAGTGTGTGTGTGTATATATATATAT	C	.	PASS	AC=1079;AF=0.285828;AFR_AF=0.2692;AMR_AF=0.2844;AN=3775;CS=DEL_pindel;EAS_AF=0.267;END=105661550;EUR_AF=0.3016;NS=2504;SAS_AF=0.3134;SVTYPE=DEL	GT	1
X	105807018	BI_GS_DEL1_B4_P3003_112	C	<CN0>	100	PASS	AC=356;AF=0.218278;AFR_AF=0.4826;AMR_AF=0.1641;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1021;END=105807804;EUR_AF=0.1319;MC=UW_VH_6544,EM_DL_DEL101184375;NS=2504;SAS_AF=0.1045;SVTYPE=DEL	GT	.
X	105839090	DEL_pindel_54246	TTATTTCTGGCTTAATTCCACTGCAGACAAAGAACATATTCTGTGAATTCAGCCAATCAAAATTTATTGAGACTTGCTTTGTGGCCCAGCACATGGTCAGTTTTGATAAATAACCTACATACACTTGAATGTGCATTCTACATTTATTGCATGCAATGTTCTAAATATATTAGCTAGGACTTACCTGTTAGTCTTCTTATCCATTCTTCCACATCCACACTTTTCTTTATCTGCTTCTTTTACCAGTTACTGGAGGAGAGGTGCTAAAATTTTCAACCATGCTTATAGGTTTATCTATTTATATTTATATTTATATTTAGAGTTCTGTCAGTTTTCACTTTTTG	T	.	PASS	AC=402;AF=0.10649;AFR_AF=0.0708;AMR_AF=0.1164;AN=3775;CS=DEL_pindel;EAS_AF=0.1204;END=105839433;EUR_AF=0.1136;NS=2504;SAS_AF=0.1267;SVTYPE=DEL	GT	0
X	105886631	ALU_umary_ALU_12741	G	<INS:ME:ALU>	.	PASS	AC=16;AF=0.00423841;AFR_AF=0.016;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=AAGAAATTTTTG	GT	0
X	105938262	BI_GS_DEL1_B5_P3003_730	A	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0;END=105949917;EUR_AF=0.0039;MC=YL_CN_LWK_4256;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	105938835	BI_GS_DEL1_B3_P3003_38	C	<CN0>	100	PASS	AC=133;AF=0.197351;AFR_AF=0.1765;AMR_AF=0.1927;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.2199;END=105939505;EUR_AF=0.1997;NS=2504;SAS_AF=0.2033;SVTYPE=DEL	GT	.
X	106094120	UW_VH_11528	A	<CN0>	100	PASS	AC=9;AF=0.00344371;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=0,89;CIPOS=-52,0;CS=DEL_union;EAS_AF=0.0013;END=106099495;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	106289379	BI_GS_DEL1_B2_P3004_156	A	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-47,47;CIPOS=-47,47;CS=DEL_union;EAS_AF=0;END=106295634;EUR_AF=0.0052;MC=YL_CN_PEL_4370;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	106332801	BI_GS_DEL1_B3_P3004_11	C	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-25,26;CIPOS=-25,26;CS=DEL_union;EAS_AF=0;END=106338582;EUR_AF=0.0052;MC=YL_CN_ESN_4474;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	106341533	UW_VH_13349	T	<CN0>	100	PASS	AC=13;AF=0.0447682;AFR_AF=0.0508;AMR_AF=0.0534;AN=2542;CIEND=0,239;CIPOS=-187,0;CS=DEL_union;EAS_AF=0.038;END=106342784;EUR_AF=0.0392;MC=BI_GS_DEL1_B2_P3004_185;NS=2504;SAS_AF=0.0432;SVTYPE=DEL	GT	.
X	106530047	DUP_gs.X_CNV_X_106530047_106606130	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=106606130;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	106585621	ALU_umary_ALU_12742	T	<INS:ME:ALU>	.	PASS	AC=21;AF=0.00556291;AFR_AF=0.0209;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null	GT	0
X	106595841	ALU_umary_ALU_12743	A	<INS:ME:ALU>	.	PASS	AC=7;AF=0.0018543;AFR_AF=0.007;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,41,279,-;NS=2504;SAS_AF=0;SVLEN=238;SVTYPE=ALU;TSD=TCCA	GT	0
X	106628964	DEL_pindel_54253	ATTAAGAGTAGAACAACATCTTTTATTTCTTCTGGCTTCAATAACCATTGCATTTGGCTTTTTATCT	A	.	PASS	AC=163;AF=0.0431788;AFR_AF=0.0239;AMR_AF=0.0611;AN=3775;CS=DEL_pindel;EAS_AF=0.0497;END=106629030;EUR_AF=0.0522;NS=2504;SAS_AF=0.0404;SVTYPE=DEL	GT	1
X	106661474	ALU_umary_ALU_12744	T	<INS:ME:ALU>	.	PASS	AC=1350;AF=0.357616;AFR_AF=0.3769;AMR_AF=0.4198;AN=3775;CS=ALU_umary;EAS_AF=0.4751;EUR_AF=0.1919;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.337;SVLEN=280;SVTYPE=ALU;TSD=GCCCTGCAACACTGCTTTCT	GT	0
X	106663112	YL_CN_CDX_3874	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=106680635;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	106744574	DEL_pindel_54257	TTGTCTCCTATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCC	T	.	PASS	AC=1186;AF=0.314172;AFR_AF=0.3529;AMR_AF=0.2748;AN=3775;CS=DEL_pindel;EAS_AF=0.284;END=106744763;EUR_AF=0.3042;MEINFO=AluY,136,281,-;NS=2504;SAS_AF=0.3315;SVTYPE=DEL_ALU	GT	0
X	106746040	DEL_pindel_54258	GCACTGACGAAGCAGTGTTCTGGAAGGCCCCTATGGGGCCAGGCATTAACCCCTAAGCTGCCGGATCTGAAGCAGTGTTGGGGGTGTGCCAGGACAATTAGGGACACTCAGAGGGGTTTGAAGCAGCAGTTGTTTACCCATCACTAAGTAAGGAATGTAAGATTTGAACAAGTGGGATGGTGGTATAGGTGCTCATGGAGGGAATGTCAGCCCTCATCCTAGGGCAGATATAATTAGTCATGGGGGGAATGGGGGGGTTTCACAGGCACATAGCTAC	G	.	PASS	AC=611;AF=0.161854;AFR_AF=0.1246;AMR_AF=0.187;AN=3775;CS=DEL_pindel;EAS_AF=0.1702;END=106746316;EUR_AF=0.1749;NS=2504;SAS_AF=0.1727;SVTYPE=DEL	GT	1
X	106782128	L1_umary_LINE1_3103	A	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5799,6019,-;NS=2504;SAS_AF=0;SVLEN=220;SVTYPE=LINE1;TSD=null	GT	0
X	106813487	ALU_umary_ALU_12745	G	<INS:ME:ALU>	.	PASS	AC=327;AF=0.0866225;AFR_AF=0.2223;AMR_AF=0.0897;AN=3775;CS=ALU_umary;EAS_AF=0.0406;EUR_AF=0.0026;MEINFO=AluYb8,7,276,+;NS=2504;SAS_AF=0.0334;SVLEN=269;SVTYPE=ALU;TSD=GAAATGTTTACCAG	GT	0
X	106835955	SVA_umary_SVA_843	A	<INS:ME:SVA>	.	PASS	AC=60;AF=0.015894;AFR_AF=0.0548;AMR_AF=0.0095;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,697,1624,+;NS=2504;SAS_AF=0;SVLEN=927;SVTYPE=SVA;TSD=TA	GT	0
X	106923102	DUP_gs.X_CNV_X_106923102_106947675	A	<CN0>,<CN2>	.	PASS	AC=1,4;AF=0.0002649,0.0010596;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=106947675;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0056;SVTYPE=CNV	GT	0
X	106950594	BI_GS_DEL1_B3_P3004_28	A	<CN0>	100	PASS	AC=4;AF=0.00344371;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-41,42;CIPOS=-41,42;CS=DEL_union;EAS_AF=0.0026;END=106953072;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	106981593	DEL_pindel_54262	AGGTCTTGGCCCTGTGCCTGCTCCCCCAACCCTGCCCTCTGGGTGATCTTGCTCAAGGACGCCAAGGGAGTTGGTGGTAGAGGCTGGGAGCACAGCCCAGGTTTCCTGGATCCTGGCCTGGCACTCTTGCCACCAGACCCCGCTGCCGCTCCCTCTCCTCTCTTGCCCTTTGTGCCCAGTCTGCACCTCCTGGAGGCACATGCCCCACACCCCACTAGTTTTCATGGGCGAGATGTTTCTATTCAACACCAGTTGGCAGTTCAGCCATATGGGGCATAGGGAGTCTGGCCTTCTGCTGCCCATGGGGCCAGACCTAGGTAAAGGGAGGGGGAGAACAGGCTACTCTGCT	A	.	PASS	AC=380;AF=0.100662;AFR_AF=0.0598;AMR_AF=0.1298;AN=3775;CS=DEL_pindel;EAS_AF=0.1099;END=106981941;EUR_AF=0.094;NS=2504;SAS_AF=0.1337;SVTYPE=DEL	GT	0
X	107607940	BI_GS_DEL1_B3_P3005_11	A	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0;END=107622940;EUR_AF=0.0052;MC=YL_CN_ESN_4476;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	107627881	BI_GS_DEL1_B4_P3005_109	T	<CN0>	100	PASS	AC=216;AF=0.216424;AFR_AF=0.2183;AMR_AF=0.1756;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.2277;END=107628640;EUR_AF=0.1867;NS=2504;SAS_AF=0.2632;SVTYPE=DEL	GT	.
X	107651526	DUP_gs.X_CNV_X_107651526_107666981	C	<CN0>,<CN2>	.	PASS	AC=3,1;AF=0.0007947,0.0002649;AFR_AF=0.003,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=107666981;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	107659539	DEL_pindel_54268	AAAAAGCACCAGTTATAATTATTAGAGTAGAAAATAAACAATTTGTTACAGCACTCCTTGTAAACTCACCCCAATCATGTTCCCTGCTCC	A	.	PASS	AC=446;AF=0.118146;AFR_AF=0.1246;AMR_AF=0.1221;AN=3775;CS=DEL_pindel;EAS_AF=0.1243;END=107659628;EUR_AF=0.0979;NS=2504;SAS_AF=0.1212;SVTYPE=DEL	GT	0
X	107706519	L1_umary_LINE1_3104	A	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,4917,5204,-;NS=2504;SAS_AF=0;SVLEN=287;SVTYPE=LINE1;TSD=null	GT	0
X	107740379	DEL_pindel_54269	CTTAGCAGAATGTTTACAAGGTTCAGCCATGTTGTAACATGAATCAGTATTAGATTCATTTTCATCACTGAATCACATTACATTGTATGGATATACCACATTTTGGTTATCGGTTTATAAGTTGATGGACATTCAAGTTGTTTCCTCATTTGGCTATTAGAAATAATGCTGCTATGAATATTTGTGTAAAAGTTTTTGTATAGATATATGTTTTTTTAATCTTGGGTATATACCTAGAAGTAGATTTCCACGTGATGTGGTAACTCTATGTGTAAACATTTGGGGACCTAACATCCTGTTTTCTAAAGTGACTGCATCATTTTCTATTTTCACCAGAGAGCCTGGTGGGGTTCCTGGAGAAGGCTGTTAGAGAGTGTGAGTTCCTCTATGTTTGTGGGCCCCAGAAGTTTCACATTATCTTATTAGCCCACACCTGGCCTTTAGCAATTAGTTGAAATGTCTAATTGAATCTTCCTACCTGCTTGTATTCTGTATTGCATTCTATATTGTCATTCAATATTCAATTTTCTTAT	C	.	PASS	AC=743;AF=0.196821;AFR_AF=0.1834;AMR_AF=0.208;AN=3775;CS=DEL_pindel;EAS_AF=0.2147;END=107740911;EUR_AF=0.1867;NS=2504;SAS_AF=0.1992;SVTYPE=DEL	GT	1
X	107846189	L1_umary_LINE1_3105	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4403,5878,+;NS=2504;SAS_AF=0;SVLEN=1475;SVTYPE=LINE1;TSD=null	GT	0
X	108032658	DEL_pindel_54274	GTCCTTCATTCTCTTGTTATGATGTATCACATTGATTGATTTGTATGTGTTGAACCA	G	.	PASS	AC=129;AF=0.0341722;AFR_AF=0.0189;AMR_AF=0.0687;AN=3775;CS=DEL_pindel;EAS_AF=0.0471;END=108032714;EUR_AF=0.0326;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	0
X	108057999	BI_GS_DEL1_B3_P3006_2	G	<CN0>	100	PASS	AC=98;AF=0.17298;AFR_AF=0.1695;AMR_AF=0.1985;AN=2542;CIEND=-36,36;CIPOS=-36,36;CS=DEL_union;EAS_AF=0.1139;END=108059415;EUR_AF=0.2115;NS=2504;SAS_AF=0.1811;SVTYPE=DEL	GT	.
X	108087559	DEL_pindel_54277	TTATGGGGAATATGTCAATGGTAGTTTGATGGGAATAGCATCGAATCTATAAATTACTTTGGGTAG	T	.	PASS	AC=18;AF=0.00476821;AFR_AF=0;AMR_AF=0.0191;AN=3775;CS=DEL_pindel;EAS_AF=0.0065;END=108087624;EUR_AF=0.0013;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	0
X	108131503	DUP_gs.X_CNV_X_108131503_108152012	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=108152012;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	108151864	YL_CN_CHB_4709	T	<CN0>	100	PASS	AC=4;AF=0.00423841;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0052;END=108156184;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	108263263	EM_DL_DEL106532	T	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0013;END=108274338;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	108264721	BI_GS_DEL1_B3_P3006_14	G	<CN0>	100	PASS	AC=274;AF=0.302517;AFR_AF=0.3121;AMR_AF=0.3034;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.3024;END=108265102;EUR_AF=0.2859;NS=2504;SAS_AF=0.3064;SVTYPE=DEL	GT	.
X	108338192	ALU_umary_ALU_12746	C	<INS:ME:ALU>	.	PASS	AC=15;AF=0.00397351;AFR_AF=0.001;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0065;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.007;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	108347263	ALU_umary_ALU_12747	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	108353221	BI_GS_DEL1_B3_P3006_17	G	<CN0>	100	PASS	AC=175;AF=0.0701987;AFR_AF=0.1486;AMR_AF=0.0763;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.0039;END=108357383;EUR_AF=0.0561;MC=UW_VH_2493,YL_CN_MXL_3779,YL_CN_PJL_5086;NS=2504;SAS_AF=0.0418;SVTYPE=DEL	GT	.
X	108573616	UW_VH_9719	C	<CN0>	100	PASS	AC=59;AF=0.0762914;AFR_AF=0.0957;AMR_AF=0.0859;AN=2542;CIEND=0,293;CIPOS=-359,0;CS=DEL_union;EAS_AF=0.0524;END=108575348;EUR_AF=0.0809;MC=BI_GS_DEL1_B2_P3006_293;NS=2504;SAS_AF=0.0627;SVTYPE=DEL	GT	.
X	108599123	UW_VH_25288	A	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,135;CIPOS=-131,0;CS=DEL_union;EAS_AF=0;END=108610357;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	108896709	UW_VH_8188	A	<CN0>	100	PASS	AC=15;AF=0.00582781;AFR_AF=0.014;AMR_AF=0.0076;AN=2542;CIEND=0,159;CIPOS=-112,0;CS=DEL_union;EAS_AF=0;END=108902199;EUR_AF=0.0039;MC=BI_GS_DEL1_B2_P3006_478,YL_CN_PUR_5720;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	108970568	SVA_umary_SVA_844	C	<INS:ME:SVA>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,50,1591,-;NS=2504;SAS_AF=0.0014;SVLEN=1541;SVTYPE=SVA;TSD=null	GT	0
X	109072643	DEL_pindel_54286	GACTCAGCCCGCCTGCACCCAGGTGAAATAAACAGCCATGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACACCGACGCGCATGAAAGTGGCACGTGCCTGTAGTCCCAGCC	G	.	PASS	AC=1015;AF=0.268874;AFR_AF=0.2582;AMR_AF=0.2653;AN=3775;CS=DEL_pindel;EAS_AF=0.2592;END=109072758;EUR_AF=0.2585;NS=2504;SAS_AF=0.3078;SVTYPE=DEL	GT	1
X	109080843	DEL_pindel_54287	TCTGTCTCAAAAAAAAAAAAAAAAAAAAAACACCGTGAAAGAATAGAAAGCCATG	T	.	PASS	AC=1179;AF=0.312318;AFR_AF=0.2941;AMR_AF=0.3073;AN=3775;CS=DEL_pindel;EAS_AF=0.3154;END=109080897;EUR_AF=0.2977;NS=2504;SAS_AF=0.3538;SVTYPE=DEL	GT	1
X	109098154	BI_GS_DEL1_B3_P3007_6	A	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-27,27;CIPOS=-27,27;CS=DEL_union;EAS_AF=0;END=109109836;EUR_AF=0.0052;MC=YL_CN_GWD_5918;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	109398184	BI_GS_DEL1_B2_P3007_189	T	<CN0>	100	PASS	AC=6;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0;END=109401375;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	109525724	L1_umary_LINE1_3107	A	<INS:ME:LINE1>	.	PASS	AC=8;AF=0.00211921;AFR_AF=0.008;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,615,5999,+;NS=2504;SAS_AF=0;SVLEN=5384;SVTYPE=LINE1;TSD=null	GT	0
X	109591372	ALU_umary_ALU_12748	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,259,-;NS=2504;SAS_AF=0;SVLEN=256;SVTYPE=ALU;TSD=null	GT	0
X	109730872	DEL_pindel_54290	CTTGGTCGCTGTTGGTGTGTAGTAGAGCTACTGATTTGTGTACATTAACTTTGTATCCTGAAACTTTGCTGAATTCATTGACCAGCTCTAGGAGCTTTTTGGATGAGTCTTTAGGGTTTTCTAGGTATACAATCATGTCATCAGCAAACAGTGACAGT	C	.	PASS	AC=1107;AF=0.293245;AFR_AF=0.2851;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2866;END=109731029;EUR_AF=0.2833;NS=2504;SAS_AF=0.3134;SVTYPE=DEL	GT	1
X	109835147	ALU_umary_ALU_12749	T	<INS:ME:ALU>	.	PASS	AC=95;AF=0.0251656;AFR_AF=0.0917;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,5,281,-;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null	GT	0
X	109938579	BI_GS_DEL1_B4_P3007_153	A	<CN0>	100	PASS	AC=28;AF=0.0108609;AFR_AF=0.0279;AMR_AF=0.0038;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.0013;END=109942134;EUR_AF=0.0117;MC=UW_VH_22982,UW_VH_9725,YL_CN_ACB_5125;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	109981884	UW_VH_21825	G	<CN0>	100	PASS	AC=5;AF=0.00715232;AFR_AF=0.007;AMR_AF=0.0115;AN=2542;CIEND=0,117;CIPOS=-146,0;CS=DEL_union;EAS_AF=0.0026;END=109984463;EUR_AF=0.0117;MC=BI_GS_DEL1_B4_P3007_158;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	110094457	BI_GS_DEL1_B2_P3008_51	A	<CN0>	100	PASS	AC=101;AF=0.136159;AFR_AF=0.1167;AMR_AF=0.1508;AN=2542;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0.1217;END=110095354;EUR_AF=0.1658;NS=2504;SAS_AF=0.1365;SVTYPE=DEL	GT	.
X	110125789	ALU_umary_ALU_12750	G	<INS:ME:ALU>	.	PASS	AC=12;AF=0.00317881;AFR_AF=0.011;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb9,3,276,+;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=AAAAGAGTAGAGTTTTTG	GT	0
X	110141273	BI_GS_DEL1_B5_P3008_106	G	<CN0>	100	PASS	AC=10;AF=0.00609272;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0026;END=110145053;EUR_AF=0.0065;MC=YL_CN_ITU_4737;NS=2504;SAS_AF=0.0139;SVTYPE=DEL	GT	.
X	110414618	DEL_pindel_54294	CTTCAAAGTATACCCTTGAGAAGCTGCACCCTTATTCCCATGATTGTTCTATAACCCCAAG	C	.	PASS	AC=1160;AF=0.307285;AFR_AF=0.3071;AMR_AF=0.3015;AN=3775;CS=DEL_pindel;EAS_AF=0.3063;END=110414678;EUR_AF=0.2846;NS=2504;SAS_AF=0.337;SVTYPE=DEL	GT	1
X	110465342	DEL_pindel_54298	CAATTTGTGTTATAGAAGGCTTCTTAATTTGCAGTATAAAAGAATCTAAACAG	C	.	PASS	AC=73;AF=0.0193377;AFR_AF=0.0229;AMR_AF=0.021;AN=3775;CS=DEL_pindel;EAS_AF=0.0406;END=110465394;EUR_AF=0.0052;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	0
X	110595844	DEL_pindel_54301	AGGGCCAACTTCATCTATGGTTTCAGTACAACACTGCTGTACTCATTTCATTAGGGAACACCAAATAGGGTTTGGGCTGGCAATTACACTAGACCTGC	A	.	PASS	AC=34;AF=0.00900662;AFR_AF=0.011;AMR_AF=0.0095;AN=3775;CS=DEL_pindel;EAS_AF=0.0079;END=110595941;EUR_AF=0.0144;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	0
X	110807787	UW_VH_13495	T	<CN0>	100	PASS	AC=288;AF=0.279205;AFR_AF=0.2841;AMR_AF=0.2805;AN=2542;CIEND=0,264;CIPOS=-297,0;CS=DEL_union;EAS_AF=0.267;END=110808204;EUR_AF=0.2977;MC=BI_GS_DEL1_B3_P3008_30;NS=2504;SAS_AF=0.2646;SVTYPE=DEL	GT	.
X	111133753	DEL_pindel_54306	GTATCTGTGGAAGGTCCTGGAACCAATCCTCCTGTACACCAAGAGACAAACATTGTGTTCTTGC	G	.	PASS	AC=897;AF=0.237616;AFR_AF=0.2233;AMR_AF=0.2519;AN=3775;CS=DEL_pindel;EAS_AF=0.2565;END=111133816;EUR_AF=0.2311;NS=2504;SAS_AF=0.234;SVTYPE=DEL	GT	1
X	111133909	DUP_gs.X_CNV_X_111133909_111148477	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=111148477;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	111153256	BI_GS_DEL1_B5_P3009_141	T	<CN0>	100	PASS	AC=136;AF=0.181987;AFR_AF=0.1974;AMR_AF=0.2004;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.1649;END=111153863;EUR_AF=0.1619;NS=2504;SAS_AF=0.1866;SVTYPE=DEL	GT	.
X	111187088	UW_VH_13395	C	<CN0>	100	PASS	AC=6;AF=0.00741722;AFR_AF=0.009;AMR_AF=0.0076;AN=2542;CIEND=0,235;CIPOS=-356,0;CS=DEL_union;EAS_AF=0.0118;END=111189328;EUR_AF=0.0065;MC=BI_GS_DEL1_B2_P3009_92,YL_CN_KHV_5064;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	111229571	L1_umary_LINE1_3108	T	<INS:ME:LINE1>	.	PASS	AC=131;AF=0.034702;AFR_AF=0.014;AMR_AF=0.0401;AN=3775;CS=L1_umary;EAS_AF=0.0039;EUR_AF=0.111;MEINFO=LINE1,15,6009,-;NS=2504;SAS_AF=0.0111;SVLEN=5994;SVTYPE=LINE1;TSD=ATCCCAAATTCTT	GT	0
X	111276718	ALU_umary_ALU_12751	T	<INS:ME:ALU>	.	PASS	AC=186;AF=0.0492715;AFR_AF=0.1167;AMR_AF=0.0324;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0.0444;MEINFO=AluYb8,1,279,-;NS=2504;SAS_AF=0.0237;SVLEN=278;SVTYPE=ALU;TSD=TGTCTTTTT	GT	0
X	111316672	SVA_umary_SVA_845	A	<INS:ME:SVA>	.	PASS	AC=21;AF=0.00556291;AFR_AF=0.001;AMR_AF=0.0038;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0.0196;MEINFO=SVA,40,1627,+;NS=2504;SAS_AF=0.0042;SVLEN=1587;SVTYPE=SVA;TSD=null	GT	0
X	111420997	ALU_umary_ALU_12752	C	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	111439435	YL_CN_JPT_4759	T	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=111578797;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	111530247	BI_GS_DEL1_B3_P3009_19	T	<CN0>	100	PASS	AC=15;AF=0.058543;AFR_AF=0.0628;AMR_AF=0.0496;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.0484;END=111531377;EUR_AF=0.0653;NS=2504;SAS_AF=0.0627;SVTYPE=DEL	GT	.
X	111557758	L1_umary_LINE1_3109	T	<INS:ME:LINE1>	.	PASS	AC=599;AF=0.158676;AFR_AF=0.2094;AMR_AF=0.2958;AN=3775;CS=L1_umary;EAS_AF=0.0524;EUR_AF=0.1867;MEINFO=LINE1,5,6018,-;NS=2504;SAS_AF=0.071;SVLEN=6013;SVTYPE=LINE1;TSD=AGGACTTTT	GT	0
X	111619957	BI_GS_DEL1_B5_P3009_551	A	<CN0>	100	PASS	AC=42;AF=0.095894;AFR_AF=0.0828;AMR_AF=0.105;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.0707;END=111621780;EUR_AF=0.1384;MC=UW_VH_21637;NS=2504;SAS_AF=0.0891;SVTYPE=DEL	GT	.
X	111667087	DUP_gs.X_CNV_X_111667087_111936181	C	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=111936181;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	111711651	DUP_gs.X_CNV_X_111711651_111745323	A	<CN0>,<CN2>	.	PASS	AC=6,1;AF=0.0015894,0.0002649;AFR_AF=0,0;AMR_AF=0.0038,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=111745323;EUR_AF=0.0052,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	111818173	DUP_gs.X_CNV_X_111818173_111840496	T	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=111840496;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	111912510	DEL_pindel_54308	ATAGCGTGTTTAAAAATAAAAGTGAAAGGTAAGCCTAAGACCTATTTGTAATACCCATGGAGCTTCCAAAGCCAGCTAAGATAATTGGCTTAGATCAGCCTTAGCAACTGGTTTAGTATTACAGTTTTCAAAGGGAAGAAACTAACTTAATTGTACATTCCAATG	A	.	PASS	AC=161;AF=0.042649;AFR_AF=0.0359;AMR_AF=0.0725;AN=3775;CS=DEL_pindel;EAS_AF=0.0393;END=111912674;EUR_AF=0.0431;NS=2504;SAS_AF=0.0334;SVTYPE=DEL	GT	1
X	111994369	UW_VH_12699	A	<CN0>	100	PASS	AC=91;AF=0.0357616;AFR_AF=0.1147;AMR_AF=0.0134;AN=2542;CIEND=0,106;CIPOS=-128,0;CS=DEL_union;EAS_AF=0.0026;END=111997226;EUR_AF=0.0091;MC=BI_GS_DEL1_B5_P3009_865,EM_DL_DEL106582,YL_CN_GWD_5919,YL_CN_PUR_5723;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	112008322	DEL_pindel_54314	AGCTGGTTAACACCATCACAGCAATAGTAGCTGTTGACAGCTGAACTGCTTTCCGATTG	A	.	PASS	AC=1024;AF=0.271258;AFR_AF=0.2592;AMR_AF=0.2634;AN=3775;CS=DEL_pindel;EAS_AF=0.2827;END=112008380;EUR_AF=0.2507;NS=2504;SAS_AF=0.3036;SVTYPE=DEL	GT	1
X	112032217	L1_umary_LINE1_3110	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2198,5923,-;NS=2504;SAS_AF=0;SVLEN=3725;SVTYPE=LINE1;TSD=GGGTAGTTTCTTTAT	GT	0
X	112052858	DEL_pindel_54317	ACTAGCAGGGATTTCAAGGGGCTTCTCTAGTTTAATGCTGAAGGACCAATGTGATGTGACGAGATGTTGTGGCAAGCAGCCTTCTTGGCTTAGGAGGAAAAGAACAGAATCTTCCAACTTCATGCCTGAATAGGAAAAACAATCCTTAGGTGATATTGACTCTGCCCTGGCTGTT	A	.	PASS	AC=1153;AF=0.30543;AFR_AF=0.2971;AMR_AF=0.2939;AN=3775;CS=DEL_pindel;EAS_AF=0.3024;END=112053032;EUR_AF=0.3016;NS=2504;SAS_AF=0.3329;SVTYPE=DEL	GT	1
X	112149816	BI_GS_DEL1_B3_P3010_6	T	<CN0>	100	PASS	AC=11;AF=0.00582781;AFR_AF=0.01;AMR_AF=0.0019;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.0065;END=112152434;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	112161029	DUP_gs.X_CNV_X_112161029_112168547	T	<CN0>,<CN2>	.	PASS	AC=7,1;AF=0.0018543,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0079,0;END=112168547;EUR_AF=0,0.0013;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV	GT	0
X	112169917	ALU_umary_ALU_12753	C	<INS:ME:ALU>	.	PASS	AC=5;AF=0.0013245;AFR_AF=0;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0039;MEINFO=AluUndef,82,281,+;NS=2504;SAS_AF=0;SVLEN=199;SVTYPE=ALU;TSD=null	GT	0
X	112351072	L1_umary_LINE1_3111	A	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,5910,+;NS=2504;SAS_AF=0;SVLEN=5909;SVTYPE=LINE1;TSD=null	GT	0
X	112435261	ALU_umary_ALU_12754	C	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluYa3_1,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	112435952	BI_GS_DEL1_B2_P3010_215	A	<CN0>	100	PASS	AC=6;AF=0.00211921;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=-46,47;CIPOS=-46,47;CS=DEL_union;EAS_AF=0;END=112440586;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	112436185	DUP_gs.X_CNV_X_112436185_112440675	T	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=112440675;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	112443765	UW_VH_3173	G	<CN0>	100	PASS	AC=66;AF=0.129536;AFR_AF=0.1316;AMR_AF=0.1298;AN=2542;CIEND=0,354;CIPOS=-310,0;CS=DEL_union;EAS_AF=0.1191;END=112444514;EUR_AF=0.1462;MC=BI_GS_DEL1_B4_P3010_62;NS=2504;SAS_AF=0.1198;SVTYPE=DEL	GT	.
X	112522502	BI_GS_DEL1_B5_P3010_440	G	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0;END=112529227;EUR_AF=0.0065;MC=YL_CN_TSI_4446;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	112597965	DEL_pindel_54321	GACTACACATGGATTCCTGAGGACTACTAAAATTTAAGGGCATGGTGGAAGAGAAAATGTTATTATCATATTCTAAGAAGAAAAGAAATATATGATTCCTTCTTATTTCTCCTGATCTGCTGAAGTACGGGTGTTTCAGTGAGAGATAGTCTGGTTAGTGACCAGATAGTCCCTACATTTAGACAAAATTTAGCTATTTCTAGTACACACAATCTTCAATTAAGGCTTTTAATAGAAATTTCAAACTAAAAGAGAATTGAGCTTAATTTGAGCAAGCCATGGA	G	.	PASS	AC=1127;AF=0.298543;AFR_AF=0.2822;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2971;END=112598247;EUR_AF=0.3003;NS=2504;SAS_AF=0.3259;SVTYPE=DEL	GT	1
X	112788553	DEL_pindel_54328	GTGCAGATGAGCAAGGAAATGAGACTTGAAACTGGAAAGTAGGTGGAGTGTATCAGGACTACTTCTTAGCCAAATAGCTAAATAGATAAGTTTGTGTTCCAGTCTTTCCGTCATCATTTCATCAGCCCT	G	.	PASS	AC=1930;AF=0.511258;AFR_AF=0.341;AMR_AF=0.4676;AN=3775;CS=DEL_pindel;EAS_AF=0.5419;END=112788681;EUR_AF=0.6332;NS=2504;SAS_AF=0.6184;SVTYPE=DEL	GT	1
X	112877015	DEL_pindel_54331	TAAAAGTAAACTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2456;AF=0.650596;AFR_AF=0.6421;AMR_AF=0.687;AN=3775;CS=DEL_pindel;EAS_AF=0.6387;END=112877346;EUR_AF=0.6684;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6295;SVTYPE=DEL_ALU	GT	0
X	112892922	YL_CN_CHS_4772	A	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=113007167;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	113148602	DEL_pindel_54332	ATTAATGCCCTCCCTGAAGGGAAGGAGGATGCTGAGTGAGTTCTCACTCTATTTGTTCTGACAAGATCTGATTGTTAAAAAGAGCCTGGCATTTCTTCACTTTTT	A	.	PASS	AC=1195;AF=0.316556;AFR_AF=0.318;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.2984;END=113148706;EUR_AF=0.3003;NS=2504;SAS_AF=0.3565;SVTYPE=DEL	GT	1
X	113149721	YL_CN_ASW_4600	A	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=113163457;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	113227860	UW_VH_12726	A	<CN0>	100	PASS	AC=19;AF=0.00741722;AFR_AF=0.0169;AMR_AF=0.0019;AN=2542;CIEND=0,279;CIPOS=-265,0;CS=DEL_union;EAS_AF=0.0026;END=113232251;EUR_AF=0.0091;MC=YL_CN_MSL_4081,EM_DL_DEL106599,BI_GS_DEL1_B5_P3011_204;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	113231092	ALU_umary_ALU_12755	C	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,279,+;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	113253298	DEL_pindel_54337	CGAGATTGTGCCACTGCACTCCAGCCTGGGTCACAGAGCCAGACTGTCTCAAAAAAAAAAAAAAAAAAAAAGGAAAAAA	C	.	PASS	AC=1126;AF=0.298278;AFR_AF=0.2792;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.2958;END=113253376;EUR_AF=0.3029;NS=2504;SAS_AF=0.3245;SVTYPE=DEL	GT	1
X	113296407	DEL_pindel_54338	CAGACTTTACGTAAGGTAGTTGTGACTCTACCTAAATGTCTTATGAAAATAGGTATTGTATCTAACTGGGGGATGTTTCCCCTATCTAGTACTATAAAATTGAAAGCATGTAAATCTGCTCTTTGAGAAATATGAATCGGACATGCTAAATGGGAACTAGTAAGATTACCTGAGCCCACAATCTGTAGGGTAAAAGCTGGAGTGCCAGTCAGGACAAATCCTCTCCTTCATAGCCTTTTGTGGAGCATTAATTGGGGCTTATGGCAAAAGACTGTGAGTACTTCCCAACAACAATGACTGGACTAGAGAATTTCCACTTGAGGGGCATTTACTGCCTTGCTATGGAATGTTAACTGAAGCTACTCCTATGCTGATGGAAGTAATGCTGTGCAAAGAGTTTCATGATAAAATGAAAATAGCTTACATAGGATCTTGGTACCTGAGTGTATTAGTCCATTTTCACACTGCTGATAAAGACATGCCCAAAACTGGACAAAAG	C	.	PASS	AC=468;AF=0.123974;AFR_AF=0.0917;AMR_AF=0.1431;AN=3775;CS=DEL_pindel;EAS_AF=0.1636;END=113296905;EUR_AF=0.1136;NS=2504;SAS_AF=0.124;SVTYPE=DEL	GT	1
X	113318427	DUP_gs.X_CNV_X_113318427_113417625	T	<CN0>,<CN2>	.	PASS	AC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0;AMR_AF=0.0019,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=113417625;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	113319208	BI_GS_DEL1_B2_P3011_141	G	<CN0>	100	PASS	AC=48;AF=0.0166887;AFR_AF=0.0578;AMR_AF=0.0019;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=113323151;EUR_AF=0.0052;MC=YL_CN_GWD_5921,YL_CN_ESN_4480,UW_VH_12170;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	113348190	DUP_gs.X_CNV_X_113348190_113355238	A	<CN0>,<CN2>	.	PASS	AC=11,5;AF=0.00291391,0.0013245;AFR_AF=0,0.004;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=113355238;EUR_AF=0.0078,0.0013;NS=2504;SAS_AF=0.0042,0;SVTYPE=CNV	GT	0
X	113348331	BI_GS_DEL1_B1_P3011_182	A	<CN0>	100	PASS	AC=13;AF=0.00503311;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0;END=113355364;EUR_AF=0.017;MC=UW_VH_3490,YL_CN_IBS_4130;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	113412632	BI_GS_DEL1_B4_P3011_53	G	<CN0>	100	PASS	AC=7;AF=0.00423841;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-29,29;CIPOS=-29,29;CS=DEL_union;EAS_AF=0.0013;END=113416467;EUR_AF=0.0078;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	113740508	ALU_umary_ALU_12756	G	<INS:ME:ALU>	.	PASS	AC=28;AF=0.00741722;AFR_AF=0.0249;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=AAAAAGTAGATATCTG	GT	0
X	113775634	DEL_pindel_54348	TCATTTGTCTCATAAGTGTCTAGTATCCAGAATATATGGATAATTATTTCAATTCAACAATTAAAAGACAAGTAATCAAATTTAAAAAGGGCCAAGAAACTTAATAGACATTTATCCAAAGGTCATATAAGGTCATCCAAAGGCTAATAAGCACATGAAAAGATGCTCATTATTATTAATTAGGGTAATGCAAACCAAAACCACAATGAGATACCCTTCCCGCATACCAAGATAGCGATAATTTTTAAAAACAAAAAATAACGAGTATTGGAGAGAACGTGGAAAAATTAAAAAGTTAATATGCCGCTAACGAGAAGTGGAAGATGCTTCCACTTTAGAAAACAGTCTGGCCATTCTTCAAAAGATTAAACAAAGTTATGACATATCCCAACAATTCCACTCCTAGGTATATACCCAAGGGAAATGAAAA	T	.	PASS	AC=300;AF=0.0794702;AFR_AF=0.0399;AMR_AF=0.0897;AN=3775;CS=DEL_pindel;EAS_AF=0.127;END=113776063;EUR_AF=0.077;NS=2504;SAS_AF=0.0794;SVTYPE=DEL	GT	1
X	113879043	L1_umary_LINE1_3112	T	<INS:ME:LINE1>	.	PASS	AC=27;AF=0.00715232;AFR_AF=0.0229;AMR_AF=0.0076;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,419,-;NS=2504;SAS_AF=0;SVLEN=418;SVTYPE=LINE1;TSD=null	GT	0
X	113997499	DEL_pindel_54350	AAGTACTTCTAGAAGTCACCAGTGGTTCTCTCGTGTGATCATGAGCAAATCAATTTTCATCATGC	A	.	PASS	AC=856;AF=0.226755;AFR_AF=0.2114;AMR_AF=0.2347;AN=3775;CS=DEL_pindel;EAS_AF=0.2251;END=113997563;EUR_AF=0.2311;NS=2504;SAS_AF=0.2396;SVTYPE=DEL	GT	1
X	114005906	ALU_umary_ALU_12757	T	<INS:ME:ALU>	.	PASS	AC=5;AF=0.0013245;AFR_AF=0.005;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa3_1,16,281,-;NS=2504;SAS_AF=0;SVLEN=265;SVTYPE=ALU;TSD=null	GT	0
X	114032058	ALU_umary_ALU_12758	T	<INS:ME:ALU>	.	PASS	AC=33;AF=0.00874172;AFR_AF=0.0329;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,10,278,-;NS=2504;SAS_AF=0;SVLEN=268;SVTYPE=ALU;TSD=CTGTGTCTTGAATTT	GT	0
X	114052726	UW_VH_17579	A	<CN0>	100	PASS	AC=5;AF=0.00503311;AFR_AF=0.007;AMR_AF=0.0038;AN=2542;CIEND=0,232;CIPOS=-219,0;CS=DEL_union;EAS_AF=0.0026;END=114056652;EUR_AF=0.0091;MC=YL_CN_ESN_4481,BI_GS_DEL1_B5_P3012_29;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	114056288	ALU_umary_ALU_12759	T	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.002;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	114059856	DUP_gs.X_CNV_X_114059856_114424105	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=114424105;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	114214889	ALU_umary_ALU_12760	C	<INS:ME:ALU>	.	PASS	AC=10;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0065;MEINFO=AluUndef,1,277,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null	GT	0
X	114249813	ALU_umary_ALU_12761	A	<INS:ME:ALU>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0052;EUR_AF=0;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	114286632	UW_VH_20336	G	<CN0>	100	PASS	AC=7;AF=0.010596;AFR_AF=0.012;AMR_AF=0.0038;AN=2542;CIEND=0,146;CIPOS=-128,0;CS=DEL_union;EAS_AF=0.0092;END=114288986;EUR_AF=0.0183;MC=BI_GS_DEL1_B4_P3012_35;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	114505815	DEL_pindel_54353	TTTTTTTTCCTCAATTTCCAATGAAAGGAATTCAAATATTTCACAGTTAGGCATTTTAATC	T	.	PASS	AC=872;AF=0.230993;AFR_AF=0.2263;AMR_AF=0.2099;AN=3775;CS=DEL_pindel;EAS_AF=0.2435;END=114505875;EUR_AF=0.2232;NS=2504;SAS_AF=0.2479;SVTYPE=DEL	GT	0
X	114542484	UW_VH_1938	T	<CN0>	100	PASS	AC=243;AF=0.112053;AFR_AF=0.0269;AMR_AF=0.1317;AN=2542;CIEND=0,287;CIPOS=-407,0;CS=DEL_union;EAS_AF=0.0275;END=114544509;EUR_AF=0.2742;MC=BI_GS_DEL1_B1_P3012_309,UW_VH_4991,YL_CN_CLM_3905,YL_CN_ITU_4738;NS=2504;SAS_AF=0.1337;SVTYPE=DEL	GT	.
X	114565895	DEL_pindel_54356	GCTCACTGCAACCTCCACCTCCCGGGTTCAAGCGATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCTCGTGCCACAGCACGAGGCTAATTTTTGCATTTTTAGTAGAGACGAGGTTTCACCATGCTGGCCAGGCTGGTCTTGAACTCCTGAC	G	.	PASS	AC=925;AF=0.245033;AFR_AF=0.2203;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2709;END=114566055;EUR_AF=0.2285;NS=2504;SAS_AF=0.2786;SVTYPE=DEL	GT	1
X	114670492	DEL_pindel_54360	TAAAACTGTGCCTGGTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCTCGTCTCTACTAAAAAATACAAAAAATTATCCGGGCGTAGTGGCGAGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	.	PASS	AC=1555;AF=0.411921;AFR_AF=0.4277;AMR_AF=0.4466;AN=3775;CS=DEL_pindel;EAS_AF=0.3298;END=114670787;EUR_AF=0.4608;MEINFO=AluY,15,281,+;NS=2504;SAS_AF=0.3997;SVTYPE=DEL_ALU	GT	1
X	114709122	ALU_umary_ALU_12762	G	<INS:ME:ALU>	.	PASS	AC=22;AF=0.00582781;AFR_AF=0.0209;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	114716645	DUP_gs.X_CNV_X_114716645_114727976	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=114727976;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	114777311	L1_umary_LINE1_3113	T	<INS:ME:LINE1>	.	PASS	AC=51;AF=0.0135099;AFR_AF=0.0439;AMR_AF=0.0057;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,5927,+;NS=2504;SAS_AF=0.0056;SVLEN=5926;SVTYPE=LINE1;TSD=AAGAAAAACCTGTT	GT	0
X	114828525	UW_VH_8407	G	<CN0>	100	PASS	AC=86;AF=0.152053;AFR_AF=0.1306;AMR_AF=0.1279;AN=2542;CIEND=0,172;CIPOS=-274,0;CS=DEL_union;EAS_AF=0.1688;END=114829308;EUR_AF=0.1684;MC=BI_GS_DEL1_B2_P3012_373;NS=2504;SAS_AF=0.1643;SVTYPE=DEL	GT	.
X	114871817	ALU_umary_ALU_12763	T	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,11,271,+;NS=2504;SAS_AF=0;SVLEN=260;SVTYPE=ALU;TSD=null	GT	0
X	114914154	YL_CN_CHB_4712	T	<CN0>	100	PASS	AC=15;AF=0.024106;AFR_AF=0.0319;AMR_AF=0.0191;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0275;END=114918367;EUR_AF=0.0339;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	114923940	EM_DL_DEL106750	A	<CN0>	100	PASS	AC=7;AF=0.00900662;AFR_AF=0.009;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0157;END=114926524;EUR_AF=0.0157;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	115137999	UW_VH_18580	C	<CN0>	100	PASS	AC=679;AF=0.269139;AFR_AF=0.2911;AMR_AF=0.2214;AN=2542;CIEND=0,365;CIPOS=-377,0;CS=DEL_union;EAS_AF=0.0916;END=115152939;EUR_AF=0.4086;MC=YL_CN_ASW_4603,UW_VH_3885,BI_GS_DEL1_B1_P3013_95,UW_VH_2185,UW_VH_3799,EM_DL_DEL106760;NS=2504;SAS_AF=0.3134;SVTYPE=DEL	GT	.
X	115182224	BI_GS_DEL1_B4_P3013_28	G	<CN0>	100	PASS	AC=400;AF=0.338543;AFR_AF=0.327;AMR_AF=0.3359;AN=2542;CIEND=-6,6;CIPOS=-6,6;CS=DEL_union;EAS_AF=0.3246;END=115183321;EUR_AF=0.3773;NS=2504;SAS_AF=0.3301;SVTYPE=DEL	GT	.
X	115208182	DEL_pindel_54363	AATGATTCAACAAGCAAAAAACAAATAACCCCATTAAAAAGTTGACAAATAGCATGAACAGACACTTCTCAAAAGAAGATAGTTAAGCAGCCAACAAATAAGAAAAAATG	A	.	PASS	AC=166;AF=0.0439735;AFR_AF=0.016;AMR_AF=0.0782;AN=3775;CS=DEL_pindel;EAS_AF=0.0812;END=115208291;EUR_AF=0.0339;NS=2504;SAS_AF=0.0292;SVTYPE=DEL	GT	0
X	115216698	DEL_pindel_54364	GAACAGGAAAAGTCCTAGAGAGACAGTGTTTGCCATGGGCTGGGTGTGGCCACAGGATAGAGAATTACTGCAGCGTCTGTGGGATTTCTTTTTGAGGTGATGAAAATATTATAAATTTAGATAGTGATGATGCTGGCATAGGTCTGTGGATATACAAAAAATCACTGTATTATACACTTCAAAATGAATT	G	.	PASS	AC=952;AF=0.252185;AFR_AF=0.2183;AMR_AF=0.2576;AN=3775;CS=DEL_pindel;EAS_AF=0.2696;END=115216887;EUR_AF=0.2598;NS=2504;SAS_AF=0.2688;SVTYPE=DEL	GT	1
X	115374652	YL_CN_KHV_5066	C	<CN0>	100	PASS	AC=5;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=115382115;EUR_AF=0.0026;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	115491990	DEL_pindel_54369	CCACACTACTCTCTGTCTTTTCTAAAGTGTTTGCTGTGAAGGAGACACAAATATTACATGTTATCTACTGTCTTGCTAGGACAAAAACATGAAATTAAAATCCATTCATGATGAGATCATGTCTCTGAAGGATTCAGAATAATTATTTGGTATAGTCATTTATATGGTGTATTAGTCCATTCTCATGCTGCTATAAGGACATACTCAAGACTGGGTAATTTATAAAGGAAAGAGGTTTAATTGACTCACAGTTCCACGTGGCTAGGGAGGCTTCAGGAAACTTACAATCATGGTGGAAGGGGAAGCAAA	C	.	PASS	AC=93;AF=0.0246358;AFR_AF=0.006;AMR_AF=0.0573;AN=3775;CS=DEL_pindel;EAS_AF=0.0262;END=115492298;EUR_AF=0.0352;NS=2504;SAS_AF=0.0139;SVTYPE=DEL	GT	0
X	115498834	DEL_pindel_54370	ATGGAAATTAAAATGGATTCCTTAGACACAAAGGGCTTAGCCTCACTACACTAGC	A	.	PASS	AC=864;AF=0.228874;AFR_AF=0.2283;AMR_AF=0.2214;AN=3775;CS=DEL_pindel;EAS_AF=0.2304;END=115498888;EUR_AF=0.2337;NS=2504;SAS_AF=0.2284;SVTYPE=DEL	GT	1
X	115505238	DEL_pindel_54371	AAGAAATGGAAGGATACTCATTATGCTGGTTGCCCCTAGAGAGTATATGTGTGTGGATGGAGAAAATAAAATGGAATTTTGGATGAGGATAAAGATTACTTCAATTTTACCTGTAATATTTGATTTCCTTTATTTTTTAAAAAAGAATGGCAAAATGTTAAAGTCATAGTCTGTTTAGTGTTATAAAGGAATACTTAAGGCTGGGTAATTTATAAAGAGCAGAGATTTATTTGGCTCATTATTCTGATGTCTGGAAAAGTTTTAGATTGGCCATTGTATTTGGTAGGGGCCACAGGCTGCTTTCTCTCATGGCGGAAGGTAAAAAGAAGCTGGCATGTATAAATATCACATGGCAAGAGAGGATGCAAGGGGTGAGGCGTACCACGCTCTTTTTAACAACCAGCTTTCTTGGAAACTAATAATCGTGAGAATTCACTCACCCCTAAGAAAGGATATTATTCTATTCATGAGGAATCTTCCCCCATGAGCCAAACTCCTGCTACTATACCCACCTTCCAACACTGCCACACGGAGTATTAAATTTCAACATGAGATTTACAGGGGACAAACATCCAAAGTACAGCAGTTAATAATTTCCTATTCTGGGTAGTAGGCTTTTTTTTTTTTTAATAAAAATGTTTTTATTTTTGCTTTTATATTGAGTACTCAAAAAAAAAAAAAAAAAGGAAAAGAAAGGTAATTAACCAAAACAAGAACAAGTCAATGCATGATAAATGCTGAATGGGTGATATGCAATTTGCTCCTTCCCTCCCTTGTTTCTTTCTTTCTTAGCTTCCTTTATGTCTTTCAATAATACCAGCCCACTCTACCAGAACTTATTTTTTTCATGATGACATGAATTCCTGTCCAAATTTCAACTCAATTGTTCGG	A	.	PASS	AC=489;AF=0.129536;AFR_AF=0.0628;AMR_AF=0.1431;AN=3775;CS=DEL_pindel;EAS_AF=0.1832;END=115506128;EUR_AF=0.1423;NS=2504;SAS_AF=0.1421;SVTYPE=DEL	GT	1
X	115538506	UW_VH_17728	T	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=0,192;CIPOS=-201,0;CS=DEL_union;EAS_AF=0;END=115543278;EUR_AF=0.0052;MC=EM_DL_DEL106765;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	115544162	BI_GS_DEL1_B4_P3013_81	G	<CN0>	100	PASS	AC=96;AF=0.153642;AFR_AF=0.1655;AMR_AF=0.1393;AN=2542;CIEND=-42,43;CIPOS=-42,43;CS=DEL_union;EAS_AF=0.1505;END=115545105;EUR_AF=0.158;NS=2504;SAS_AF=0.1462;SVTYPE=DEL	GT	.
X	115754331	ALU_umary_ALU_12764	A	<INS:ME:ALU>	.	PASS	AC=31;AF=0.00821192;AFR_AF=0.0289;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	115787921	YL_CN_GWD_5924	T	<CN0>	100	PASS	AC=11;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=115847146;EUR_AF=0.0065;MC=BI_GS_DEL1_B3_P3013_29;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	115935706	DUP_gs.X_CNV_X_115935706_116029510	A	<CN0>,<CN2>	.	PASS	AC=0,8;AF=0,0.00211921;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=116029510;EUR_AF=0,0.0078;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	115986169	YL_CN_GBR_4572	C	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=115999068;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	116022095	BI_GS_DEL1_B3_P3014_2	A	<CN0>	100	PASS	AC=31;AF=0.0818543;AFR_AF=0.0847;AMR_AF=0.0763;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0.0785;END=116023545;EUR_AF=0.0901;NS=2504;SAS_AF=0.0766;SVTYPE=DEL	GT	.
X	116025285	L1_umary_LINE1_3114	A	<INS:ME:LINE1>	.	PASS	AC=493;AF=0.130596;AFR_AF=0.0548;AMR_AF=0.1431;AN=3775;CS=L1_umary;EAS_AF=0.2618;EUR_AF=0.0561;MEINFO=LINE1,5399,5986,+;NS=2504;SAS_AF=0.1671;SVLEN=587;SVTYPE=LINE1;TSD=AA	GT	0
X	116059928	DEL_pindel_54380	TTCTTGCCATTCCAGTTGAAGAGAGACAATTTGACATCTTAGAGATGGCTGCATGCAAGCATTTAAACCTGTGAGAGAATGCAGTGCA	T	.	PASS	AC=641;AF=0.169801;AFR_AF=0.1515;AMR_AF=0.1737;AN=3775;CS=DEL_pindel;EAS_AF=0.1885;END=116060015;EUR_AF=0.1775;NS=2504;SAS_AF=0.1643;SVTYPE=DEL	GT	1
X	116072766	DUP_gs.X_CNV_X_116072766_116098248	G	<CN0>,<CN2>	.	PASS	AC=1,5;AF=0.0002649,0.0013245;AFR_AF=0,0;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=116098248;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	116109172	BI_GS_DEL2_B1_P0613_1	T	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0;END=116302603;EUR_AF=0.0065;MC=YL_CN_CLM_3910;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	116121000	BI_GS_DEL1_B3_P3014_5	T	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0;END=116133556;EUR_AF=0.0065;MC=YL_CN_GWD_5925;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	116126382	DEL_pindel_54383	CTAAAGTGCAGTGGCATGATCATAGCACACTGCAACGTTGAACTCCTGGGCTCAAGGCATCCTCCTGCCTCAGCCTCTCAAGGAGT	C	.	PASS	AC=838;AF=0.221987;AFR_AF=0.2084;AMR_AF=0.2347;AN=3775;CS=DEL_pindel;EAS_AF=0.2277;END=116126467;EUR_AF=0.2193;NS=2504;SAS_AF=0.2284;SVTYPE=DEL	GT	1
X	116380300	ALU_umary_ALU_12765	A	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluUndef,1,271,+;NS=2504;SAS_AF=0;SVLEN=270;SVTYPE=ALU;TSD=null	GT	0
X	116438555	ALU_umary_ALU_12766	G	<INS:ME:ALU>	.	PASS	AC=197;AF=0.0521854;AFR_AF=0.0788;AMR_AF=0.0305;AN=3775;CS=ALU_umary;EAS_AF=0.0105;EUR_AF=0.0587;MEINFO=AluYa4_3,23,281,+;NS=2504;SAS_AF=0.0682;SVLEN=258;SVTYPE=ALU;TSD=AAGAGTGAATGCTG	GT	0
X	116454345	DEL_pindel_54389	TAGAAATGCAAATTCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAAGAGGCGGAGCTTGCAGTGAGCCGGGATAGCGCCACTGCAGTCCAGCTTGGGCGAAAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAGAAA	T	.	PASS	AC=1600;AF=0.423841;AFR_AF=0.4606;AMR_AF=0.4332;AN=3775;CS=DEL_pindel;EAS_AF=0.2945;END=116454664;EUR_AF=0.4974;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.4248;SVTYPE=DEL_ALU	GT	1
X	116503005	DEL_pindel_54390	GCCATTTTCCTGATCTTTGGTTCAGTTCCCTTGGGGCCAACTATATGCATTTGCAGGAGACCTAGCTAAAGCTGGGGGGTACAGCCTAGAGCCATGGAACACAGCAAAACTGACTAGCTTCACCTCAGGGAAATAAATTCAGGGCCTTCACAAAACATTCTACTAAGAAAGTCAATGTTTACTCTCAAGTTATTTGATTTTCAAGTTATCTGCTTCAATAAGCTTTTTCAC	G	.	PASS	AC=42;AF=0.0111258;AFR_AF=0.009;AMR_AF=0.0038;AN=3775;CS=DEL_pindel;EAS_AF=0.0118;END=116503235;EUR_AF=0.0117;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	1
X	116514316	YL_CN_ACB_5135	C	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=116590069;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	116577188	DEL_pindel_54392	CTGCATTTCCAACTGAGGTGCCCTGTTCATCTCATTGGGACTGGTTGAACAGTGGGTGCAGCCCACGGAGGGTGAGCCAAAGCAGGGTGGGGCATTTCCTCACATGGGAAGTGCAAGGGGTCAAGGAATTTTCTCCCCTAACCAAGGGAAGCTATGAGGGACTGAGCCTGAGGAGCCACGCACTCTGGCACAGACACTGCACTTTTCCCACGATATTCGCAACCCATAAACCAGGTGATTCTGTCTGGTGCCAACCCCACCACGGCCCTGGGTTT	C	.	PASS	AC=157;AF=0.0415894;AFR_AF=0.016;AMR_AF=0.0592;AN=3775;CS=DEL_pindel;EAS_AF=0.0707;END=116577462;EUR_AF=0.0431;NS=2504;SAS_AF=0.032;SVTYPE=DEL	GT	0
X	116610705	DEL_pindel_54395	CATATATATATGCATATATATATATATATATATATATATATATATATATATATATATATAT	C	.	PASS	AC=2452;AF=0.649536;AFR_AF=0.6331;AMR_AF=0.6393;AN=3775;CS=DEL_pindel;EAS_AF=0.6675;END=116610765;EUR_AF=0.6567;NS=2504;SAS_AF=0.6532;SVTYPE=DEL	GT	1
X	116611894	DEL_pindel_54396	TTGGTTCCATATGAATTTTAGAATTGTATTTTCTAACTCTGTGAAGAATGA	T	.	PASS	AC=1251;AF=0.331391;AFR_AF=0.327;AMR_AF=0.3263;AN=3775;CS=DEL_pindel;EAS_AF=0.3128;END=116611944;EUR_AF=0.3185;NS=2504;SAS_AF=0.3747;SVTYPE=DEL	GT	1
X	116627646	ALU_umary_ALU_12767	T	<INS:ME:ALU>	.	PASS	AC=974;AF=0.258013;AFR_AF=0.0907;AMR_AF=0.2748;AN=3775;CS=ALU_umary;EAS_AF=0.4581;EUR_AF=0.1149;MEINFO=AluYb11,1,277,-;NS=2504;SAS_AF=0.4192;SVLEN=276;SVTYPE=ALU;TSD=AAGTAAAGTACTTATT	GT	0
X	116720749	UW_VH_7544	G	<CN0>	100	PASS	AC=31;AF=0.0219868;AFR_AF=0.015;AMR_AF=0.0687;AN=2542;CIEND=0,278;CIPOS=-298,0;CS=DEL_union;EAS_AF=0.0223;END=116722788;EUR_AF=0.0131;MC=BI_GS_DEL1_B2_P3014_361;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	116754602	BI_GS_DEL1_B2_P3014_373	C	<CN0>	100	PASS	AC=6;AF=0.00609272;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.0079;END=116757327;EUR_AF=0.0091;MC=YL_CN_ACB_5136;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	116808653	DEL_pindel_54399	AGCCCAGAGACTTTGGCATAGAAACAGCTGCAGTGGAACACAGCCAGGGGCACACATCCCCTAAGACTTACCACATCCCTCTAGATGGCTTTGGATTTTGTTGATTGT	A	.	PASS	AC=258;AF=0.0683444;AFR_AF=0.0249;AMR_AF=0.1221;AN=3775;CS=DEL_pindel;EAS_AF=0.089;END=116808760;EUR_AF=0.0757;NS=2504;SAS_AF=0.0599;SVTYPE=DEL	GT	0
X	116838864	ALU_umary_ALU_12768	A	<INS:ME:ALU>	.	PASS	AC=713;AF=0.188874;AFR_AF=0.1745;AMR_AF=0.1088;AN=3775;CS=ALU_umary;EAS_AF=0.1754;EUR_AF=0.235;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.2326;SVLEN=280;SVTYPE=ALU;TSD=TAATAATAAATCAA	GT	0
X	116842016	BI_GS_DEL1_B2_P3014_412	A	<CN0>	100	PASS	AC=63;AF=0.110728;AFR_AF=0.1117;AMR_AF=0.1279;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0.0969;END=116842861;EUR_AF=0.1201;NS=2504;SAS_AF=0.1017;SVTYPE=DEL	GT	.
X	116914925	DEL_pindel_54403	GGAGAAAGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACAACATGATTGTATATCTAGAAAACCCCATTGTAGCAGCAGAATTTCAAGCATTTACAGAAGAGATTTCTACAAGGAAGGCCTTCC	G	.	PASS	AC=487;AF=0.129007;AFR_AF=0.0479;AMR_AF=0.1508;AN=3775;CS=DEL_pindel;EAS_AF=0.1623;END=116915073;EUR_AF=0.1449;NS=2504;SAS_AF=0.1741;SVTYPE=DEL	GT	1
X	116918377	YL_CN_PJL_5093	G	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=116928487;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	116930920	L1_umary_LINE1_3115	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,1479,6003,+;NS=2504;SAS_AF=0;SVLEN=4524;SVTYPE=LINE1;TSD=null	GT	0
X	116979882	DEL_pindel_54404	TGAGTTTTGAAAAGTAACAAATTTGGATATGAAGTTAGACAAAGAGCTGGATTGGCACTGTGGCAAGGACTGTTTATTGCTTCCCAACATTTATTCTCCCTTCTTCTTTAACAAAGAGAACCTTGAGTTTTAGTTGAGAATATTCAACACAGAAAATACTGGATTTTCTAGCCTCCCTTTCAGCTAGATGAAGCTATGCTCCTAAATTCAAAAAGGTGAGATGCAAGCAAAAATATTACATGGAACTTCTGGGAAAGACTTCTTCAAA	T	.	PASS	AC=620;AF=0.164238;AFR_AF=0.0778;AMR_AF=0.1889;AN=3775;CS=DEL_pindel;EAS_AF=0.2107;END=116980149;EUR_AF=0.1932;NS=2504;SAS_AF=0.1866;SVTYPE=DEL	GT	1
X	117090030	ALU_umary_ALU_12769	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa1_1,5,268,+;NS=2504;SAS_AF=0;SVLEN=263;SVTYPE=ALU;TSD=null	GT	0
X	117112561	BI_GS_DEL1_B3_P3015_6	T	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-43,44;CIPOS=-43,44;CS=DEL_union;EAS_AF=0;END=117120259;EUR_AF=0.0039;MC=YL_CN_STU_4651;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	117376106	UW_VH_3607	G	<CN0>	100	PASS	AC=115;AF=0.0598675;AFR_AF=0.0808;AMR_AF=0.1126;AN=2542;CIEND=0,118;CIPOS=-212,0;CS=DEL_union;EAS_AF=0.0183;END=117378799;EUR_AF=0.0692;MC=BI_GS_DEL1_B5_P3015_279,YL_CN_TSI_4453;NS=2504;SAS_AF=0.0265;SVTYPE=DEL	GT	.
X	117454126	BI_GS_DEL1_B1_P3015_278	G	<CN0>	100	PASS	AC=1438;AF=0.596821;AFR_AF=0.7807;AMR_AF=0.6336;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7264;END=117454959;EUR_AF=0.2807;NS=2504;SAS_AF=0.5125;SVTYPE=DEL	GT	.
X	117681322	DEL_pindel_54416	TCATGTCCTGTTCTCACTTTCATTTTCAAGCCCTGAAAATAATGAATCCAAGTTGTAGGATACTTCCTGTATATCGCTTGCACCTAAG	T	.	PASS	AC=941;AF=0.249272;AFR_AF=0.2273;AMR_AF=0.25;AN=3775;CS=DEL_pindel;EAS_AF=0.2526;END=117681409;EUR_AF=0.2454;NS=2504;SAS_AF=0.2799;SVTYPE=DEL	GT	1
X	117758976	L1_umary_LINE1_3116	G	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,1349,5982,+;NS=2504;SAS_AF=0;SVLEN=4633;SVTYPE=LINE1;TSD=null	GT	0
X	117976514	UW_VH_8910	T	<CN0>	100	PASS	AC=21;AF=0.0169536;AFR_AF=0.0339;AMR_AF=0.0134;AN=2542;CIEND=0,288;CIPOS=-294,0;CS=DEL_union;EAS_AF=0.0065;END=117979494;EUR_AF=0.0157;MC=YL_CN_ACB_5138,EM_DL_DEL106807,BI_GS_DEL1_B2_P3015_411;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	.
X	118203397	ALU_umary_ALU_12771	T	<INS:ME:ALU>	.	PASS	AC=27;AF=0.00715232;AFR_AF=0.0259;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=AAAATACAGACTT	GT	0
X	118329554	UW_VH_16921	G	<CN0>	100	PASS	AC=15;AF=0.00423841;AFR_AF=0.013;AMR_AF=0;AN=2542;CIEND=0,244;CIPOS=-247,0;CS=DEL_union;EAS_AF=0;END=118337961;EUR_AF=0.0039;MC=BI_GS_DEL1_B3_P3016_13,YL_CN_ESN_4486;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	118411168	YL_CN_CHB_4716	G	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=118469125;EUR_AF=0.0065;MC=BI_GS_DEL1_B4_P3016_60;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	118417565	YL_CN_CHS_4774	A	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=118549627;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	118447777	DEL_pindel_54424	GAGATTGTAAGGGCCAATGTTGAGAGATAAAATAAGTTCAGTTTCTCTATGAATTAATCATTAATGTCGAAGGCACACTGATGGAAGACCAGCATATGGGCCCCTGTGTCAGATTAATAAGTTTTTCTTGAAGCATTAACCAACTCCTTAATAAAGGTTATAAAGATTATAAAAGGCTTATTGAAGTTATATCTTATGCTCAAGATTAAAATTTTATAGATTGTTTATAAAATTTTGAAAAACAAATTTAATTGGCGTCATGCTGTTTTTATTAGGGCTTATTGTTTGGAAAATAAAGTCTCCTCTCTCAAAGAATGAAGGATTTTGTCTTTTTTTGAAATCCTTGAGTTACCAGTTTGGTGAAATGAATGGCTTATTTTACAATGATCTGTGATATCAAGTGTTTTAAACCTTTGATATTTGACACCTTCCAAAATCAAATTATAAATTATGTCTTTTTCTGATCTAATTAATCCTTTAAGATATTAGGTTCCCCAAAGTCCAAAAATGACATAATTTGGCCTATTTCATATAAACATCATACAGGAAACATTGTCAAGTGTGAAATGGTGTTTGGTTTTCTTTGAGCTGTATCTATATAAATATGTTATTGGTATGTGTTCCAAAATTATGGGAAAGTCCTATAATTCTGATATGACTTACTGTACATAATCAGTAATAATTATAATTGTTTTCTTAAATTATTGTGTGCCACAGAGGCAACAAATTTCCTTGTCCATTGTGTCTTTGACTATGGCTGCCCTAAAACTTTTTTCATCCATGGACAATTTTTGTCTTGTTTTCGTCCTCTTTAGA	G	.	PASS	AC=393;AF=0.104106;AFR_AF=0.0708;AMR_AF=0.126;AN=3775;CS=DEL_pindel;EAS_AF=0.1296;END=118448592;EUR_AF=0.0979;NS=2504;SAS_AF=0.1142;SVTYPE=DEL	GT	1
X	118467590	DUP_gs.X_CNV_X_118467590_118506357	C	<CN0>,<CN2>	.	PASS	AC=3,1;AF=0.0007947,0.0002649;AFR_AF=0.002,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=118506357;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	118486258	BI_GS_DEL1_B5_P3016_425	T	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-16,17;CIPOS=-16,17;CS=DEL_union;EAS_AF=0.0013;END=118501298;EUR_AF=0.0065;MC=YL_CN_GIH_3482;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	118496267	DEL_pindel_54426	TGTCCGGGAGGTGAGGGGCGCCTCAGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCAGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCC	T	.	PASS	AC=911;AF=0.241324;AFR_AF=0.2183;AMR_AF=0.2099;AN=3775;CS=DEL_pindel;EAS_AF=0.2435;END=118496394;EUR_AF=0.2258;NS=2504;SAS_AF=0.3106;SVTYPE=DEL	GT	0
X	118523301	DEL_pindel_54427	ACTTTGTAACTTCACTTTAGCCTCTGATTGCTTGCACCAGTCAGATGTTTGCATAGGAGTGTGAC	A	.	PASS	AC=481;AF=0.127417;AFR_AF=0.0957;AMR_AF=0.1317;AN=3775;CS=DEL_pindel;EAS_AF=0.1217;END=118523365;EUR_AF=0.1501;NS=2504;SAS_AF=0.1504;SVTYPE=DEL	GT	1
X	118873967	EM_DL_DEL106831	C	<CN0>	100	PASS	AC=1545;AF=0.609536;AFR_AF=0.5474;AMR_AF=0.6508;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.4725;END=118876560;EUR_AF=0.7546;MC=YL_CN_MXL_3783,UW_VH_11602,UW_VH_8099,YL_CN_PUR_5728,YL_CN_LWK_4268,UW_VH_10051,UW_VH_6931,BI_GS_DEL1_B4_P3016_112,UW_VH_18626,UW_VH_56,UW_VH_21698;NS=2504;SAS_AF=0.6574;SVTYPE=DEL	GT	.
X	118908738	BI_GS_DEL1_B3_P3016_25	C	<CN0>	100	PASS	AC=7;AF=0.00688742;AFR_AF=0.004;AMR_AF=0.0076;AN=2542;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.0065;END=118911083;EUR_AF=0.0078;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	118949933	BI_GS_DEL1_B4_P3016_123	C	<CN0>	100	PASS	AC=109;AF=0.135894;AFR_AF=0.0987;AMR_AF=0.1641;AN=2542;CIEND=-23,24;CIPOS=-23,24;CS=DEL_union;EAS_AF=0.1309;END=118951131;EUR_AF=0.1567;NS=2504;SAS_AF=0.1504;SVTYPE=DEL	GT	.
X	119029253	DUP_gs.X_CNV_X_119029253_119058207	A	<CN0>,<CN2>,<CN3>	.	PASS	AC=1,22,35;AF=0.0002649,0.00582781,0.00927152;AFR_AF=0.001,0.0219,0.0339;AMR_AF=0,0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0,0;END=119058207;EUR_AF=0,0,0;NS=2504;SAS_AF=0,0,0;SVTYPE=CNV	GT	0
X	119033750	DUP_gs.X_CNV_X_119033750_119067483	G	<CN0>,<CN2>	.	PASS	AC=1,62;AF=0.0002649,0.0164238;AFR_AF=0.001,0.0608;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=119067483;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	119036694	DUP_gs.X_CNV_X_119036694_119055824	G	<CN0>,<CN2>,<CN3>	.	PASS	AC=0,19,37;AF=0,0.00503311,0.00980132;AFR_AF=0,0.0189,0.0359;AMR_AF=0,0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0,0;END=119055824;EUR_AF=0,0,0;NS=2504;SAS_AF=0,0,0;SVTYPE=CNV	GT	0
X	119083053	YL_CN_PUR_5729	C	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=119100549;EUR_AF=0.0052;MC=BI_GS_DEL1_B2_P3017_20;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	119267168	SVA_umary_SVA_846	A	<INS:ME:SVA>	.	PASS	AC=5;AF=0.0013245;AFR_AF=0;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=SVA,1049,1615,+;NS=2504;SAS_AF=0.0056;SVLEN=566;SVTYPE=SVA;TSD=null	GT	0
X	119486851	YL_CN_STU_4654	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=119531340;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	119527856	ALU_umary_ALU_12772	T	<INS:ME:ALU>	.	PASS	AC=922;AF=0.244238;AFR_AF=0.0937;AMR_AF=0.2557;AN=3775;CS=ALU_umary;EAS_AF=0.2016;EUR_AF=0.453;MEINFO=AluUndef,9,281,-;NS=2504;SAS_AF=0.2688;SVLEN=272;SVTYPE=ALU;TSD=TCTGTTGTGGTTTT	GT	1
X	119684366	L1_umary_LINE1_3117	G	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,1,5966,+;NS=2504;SAS_AF=0;SVLEN=5965;SVTYPE=LINE1;TSD=AAAAGCCTTCCTGG	GT	0
X	119839399	BI_GS_DEL1_B3_P3017_22	A	<CN0>	100	PASS	AC=11;AF=0.00317881;AFR_AF=0.009;AMR_AF=0.0019;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0;END=119843259;EUR_AF=0.0026;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	119892844	L1_umary_LINE1_3118	T	<INS:ME:LINE1>	.	PASS	AC=580;AF=0.153642;AFR_AF=0.0837;AMR_AF=0.187;AN=3775;CS=L1_umary;EAS_AF=0.038;EUR_AF=0.3094;MEINFO=LINE1,2921,6019,-;NS=2504;SAS_AF=0.1838;SVLEN=3098;SVTYPE=LINE1;TSD=CATGTCTTTCTTTT	GT	0
X	119951623	EM_DL_DEL106847	G	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0013;END=119955626;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	120160584	BI_GS_DEL1_B5_P3018_48	G	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-21,21;CIPOS=-21,21;CS=DEL_union;EAS_AF=0;END=120168106;EUR_AF=0.0065;MC=YL_CN_TSI_4456;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	120404314	ALU_umary_ALU_12773	C	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.002;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	120532520	BI_GS_DEL1_B1_P3018_263	T	<CN0>	100	PASS	AC=25;AF=0.0601325;AFR_AF=0.0688;AMR_AF=0.0458;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.0576;END=120533981;EUR_AF=0.0574;NS=2504;SAS_AF=0.0641;SVTYPE=DEL	GT	.
X	120549880	YL_CN_ITU_4743	C	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=120677946;EUR_AF=0.0065;MC=BI_GS_DEL2_B4_P0614_1;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	120588422	UW_VH_5680	G	<CN0>	100	PASS	AC=99;AF=0.125298;AFR_AF=0.1047;AMR_AF=0.1298;AN=2542;CIEND=0,338;CIPOS=-383,0;CS=DEL_union;EAS_AF=0.1518;END=120589335;EUR_AF=0.1397;MC=BI_GS_DEL1_B2_P3018_220;NS=2504;SAS_AF=0.1072;SVTYPE=DEL	GT	.
X	120612508	DUP_gs.X_CNV_X_120612508_120617824	C	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=120617824;EUR_AF=0.0013,0;NS=2504;SAS_AF=0.0014,0.0014;SVTYPE=CNV	GT	0
X	120774102	UW_VH_4604	T	<CN0>	100	PASS	AC=7;AF=0.0116556;AFR_AF=0.005;AMR_AF=0.0076;AN=2542;CIEND=0,180;CIPOS=-145,0;CS=DEL_union;EAS_AF=0.0105;END=120776600;EUR_AF=0.0313;MC=BI_GS_DEL1_B1_P3018_402;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	120798244	BI_GS_DEL1_B3_P3018_25	A	<CN0>	100	PASS	AC=9;AF=0.00291391;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=120814269;EUR_AF=0.0091;MC=YL_CN_ASW_4608;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	120801576	YL_CN_FIN_4348	A	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=120932895;EUR_AF=0.0091;MC=BI_GS_DEL2_B1_P0614_1;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	120889998	YL_CN_ITU_4744	G	<CN0>	100	PASS	AC=12;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=120952700;EUR_AF=0.0052;MC=BI_GS_DEL1_B4_P3018_105;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	120912381	ALU_umary_ALU_12774	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,8,281,-;NS=2504;SAS_AF=0.0014;SVLEN=273;SVTYPE=ALU;TSD=null	GT	0
X	120974952	BI_GS_DEL1_B5_P3018_657	A	<CN0>	100	PASS	AC=73;AF=0.0352318;AFR_AF=0.1017;AMR_AF=0.0172;AN=2542;CIEND=-45,46;CIPOS=-45,46;CS=DEL_union;EAS_AF=0.0105;END=120978752;EUR_AF=0.0091;MC=YL_CN_LWK_4270,YL_CN_ESN_4490;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	121009409	DEL_pindel_54466	TTTTATATGAACTGCCTATGTAAATATCAATTAATATGAACTGCCTATGTAAATATCAA	T	.	PASS	AC=664;AF=0.175894;AFR_AF=0.1565;AMR_AF=0.1794;AN=3775;CS=DEL_pindel;EAS_AF=0.2238;END=121009467;EUR_AF=0.1514;NS=2504;SAS_AF=0.1755;SVTYPE=DEL	GT	1
X	121054411	DUP_gs.X_CNV_X_121054411_121066916	T	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=121066916;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	121268952	YL_CN_LWK_4271	A	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=121378787;EUR_AF=0.0052;MC=BI_GS_DEL2_B4_P0614_2;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	121308064	BI_GS_DEL1_B1_P3019_174	T	<CN0>	100	PASS	AC=27;AF=0.00847682;AFR_AF=0.003;AMR_AF=0.0229;AN=2542;CIEND=-24,25;CIPOS=-24,25;CS=DEL_union;EAS_AF=0.0013;END=121315515;EUR_AF=0.017;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	121386279	DEL_pindel_54473	GGAGGAAGGCCTGAGAGCCCCTGGCAAATCACTGGTGTAAGTCCAAAAGTCCAAAAGCTGAAGAACTTGGAGTCTGATGTTTGAGGTCAGGAAGCATACAGCACAGGAGAAAAATGAAGGCTGGAAGACTCAGCAAGTCTGCTCTTTCCAACTTCTTCTGCCTCCTTTATTCTAGCTACATTGAAAGCTGATTAGATGGTGGCCACCCAGATGGAGGGCGGGTCTGCCTCTCCCAGTCCAC	G	.	PASS	AC=260;AF=0.0688742;AFR_AF=0.009;AMR_AF=0.0782;AN=3775;CS=DEL_pindel;EAS_AF=0.1034;END=121386519;EUR_AF=0.0875;NS=2504;SAS_AF=0.0891;SVTYPE=DEL	GT	1
X	121569332	ALU_umary_ALU_12775	T	<INS:ME:ALU>	.	PASS	AC=584;AF=0.154702;AFR_AF=0.2592;AMR_AF=0.0878;AN=3775;CS=ALU_umary;EAS_AF=0.1505;EUR_AF=0.077;MEINFO=AluYb8,2,275,-;NS=2504;SAS_AF=0.1448;SVLEN=273;SVTYPE=ALU;TSD=GTCATCTACAATTTCTTTCTT	GT	0
X	121581286	ALU_umary_ALU_12776	G	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,277,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null	GT	0
X	121760094	L1_umary_LINE1_3120	T	<INS:ME:LINE1>	.	PASS	AC=49;AF=0.0129801;AFR_AF=0.0439;AMR_AF=0.0095;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5544,6019,-;NS=2504;SAS_AF=0;SVLEN=475;SVTYPE=LINE1;TSD=null	GT	0
X	121780153	BI_GS_DEL1_B5_P3019_554	C	<CN0>	100	PASS	AC=9;AF=0.00291391;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=121787535;EUR_AF=0.0039;MC=YL_CN_PEL_4379;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	121912788	DEL_pindel_54484	GGGTCTTAACAGAAATAGACAGTGAATCTGGACTGGGATTTGCTTACCTGGTAGAAGACAAAAATGTTCAGAATGCTGTGA	G	.	PASS	AC=892;AF=0.236291;AFR_AF=0.1964;AMR_AF=0.2557;AN=3775;CS=DEL_pindel;EAS_AF=0.2343;END=121912868;EUR_AF=0.2428;NS=2504;SAS_AF=0.273;SVTYPE=DEL	GT	1
X	121946120	DUP_gs.X_CNV_X_121946120_121949175	A	<CN0>,<CN2>	.	PASS	AC=13,2;AF=0.00344371,0.0005298;AFR_AF=0.012,0.001;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=121949175;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	121977572	DEL_pindel_54485	CTTTGAATACAGCTACTTCTCAAAATCTACTCTACTGGGGGCATTTTCCTAATTATCTTATTACTGCCCCCTCTTATTTCATGATATCGGGTAAGGCAGCATTTAG	C	.	PASS	AC=1141;AF=0.302252;AFR_AF=0.2911;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.2971;END=121977677;EUR_AF=0.295;NS=2504;SAS_AF=0.3357;SVTYPE=DEL	GT	1
X	122114608	DUP_gs.X_CNV_X_122114608_122143121	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=122143121;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	122131124	DUP_gs.X_CNV_X_122131124_122137898	G	<CN0>,<CN2>	.	PASS	AC=3,1;AF=0.0007947,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=122137898;EUR_AF=0,0;NS=2504;SAS_AF=0.0042,0;SVTYPE=CNV	GT	0
X	122156938	DEL_pindel_54490	AGAAACAAGAACACACCAAACCCAAATCCAGCAGAAGAAAGGAAATAACCAAGATCAGAGCAGAACTAAATGAAATTGAAACCAAAAAAATACAAAAGATAAATGAAACAAAATGCTGATTCTTTGAAAAGTGAAATAAAATT	A	.	PASS	AC=346;AF=0.0916556;AFR_AF=0.0209;AMR_AF=0.1164;AN=3775;CS=DEL_pindel;EAS_AF=0.1165;END=122157080;EUR_AF=0.1397;NS=2504;SAS_AF=0.0947;SVTYPE=DEL	GT	1
X	122185498	DEL_pindel_54492	CAAAAACAGGCAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAA	C	.	PASS	AC=2508;AF=0.664371;AFR_AF=0.662;AMR_AF=0.6603;AN=3775;CS=DEL_pindel;EAS_AF=0.6466;END=122185850;EUR_AF=0.6958;MEINFO=AluYb5,1,281,+;NS=2504;SAS_AF=0.656;SVTYPE=DEL_ALU	GT	0
X	122219030	UW_VH_20119	A	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,51;CIPOS=-30,0;CS=DEL_union;EAS_AF=0;END=122223855;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	122226272	L1_umary_LINE1_3121	C	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1523,6015,-;NS=2504;SAS_AF=0;SVLEN=4492;SVTYPE=LINE1;TSD=null	GT	0
X	122235285	BI_GS_DEL1_B3_P3020_13	A	<CN0>	100	PASS	AC=63;AF=0.13351;AFR_AF=0.1306;AMR_AF=0.1546;AN=2542;CIEND=-23,24;CIPOS=-23,24;CS=DEL_union;EAS_AF=0.0929;END=122236168;EUR_AF=0.1345;NS=2504;SAS_AF=0.1643;SVTYPE=DEL	GT	.
X	122315501	UW_VH_22186	A	<CN0>	100	PASS	AC=47;AF=0.108344;AFR_AF=0.1067;AMR_AF=0.1183;AN=2542;CIEND=0,149;CIPOS=-106,0;CS=DEL_union;EAS_AF=0.1073;END=122316263;EUR_AF=0.1136;MC=BI_GS_DEL1_B5_P3020_260;NS=2504;SAS_AF=0.0989;SVTYPE=DEL	GT	.
X	122316013	BI_GS_DEL1_B4_P3020_46	A	<CN0>	100	PASS	AC=99;AF=0.167682;AFR_AF=0.1605;AMR_AF=0.1775;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.161;END=122316578;EUR_AF=0.1632;MC=UW_VH_3747;NS=2504;SAS_AF=0.1825;SVTYPE=DEL	GT	.
X	122359455	L1_umary_LINE1_3122	G	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,62,385,+;NS=2504;SAS_AF=0;SVLEN=323;SVTYPE=LINE1;TSD=null	GT	0
X	122372569	UW_VH_3577	G	<CN0>	100	PASS	AC=88;AF=0.0966887;AFR_AF=0.0828;AMR_AF=0.1145;AN=2542;CIEND=0,328;CIPOS=-352,0;CS=DEL_union;EAS_AF=0.0615;END=122373422;EUR_AF=0.1371;MC=EM_DL_DEL101188239,BI_GS_DEL1_B2_P3020_197;NS=2504;SAS_AF=0.0975;SVTYPE=DEL	GT	.
X	122672378	ALU_umary_ALU_12777	T	<INS:ME:ALU>	.	PASS	AC=725;AF=0.192053;AFR_AF=0.0818;AMR_AF=0.2901;AN=3775;CS=ALU_umary;EAS_AF=0.2251;EUR_AF=0.299;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.1253;SVLEN=279;SVTYPE=ALU;TSD=GATCTCCATTTCTTT	GT	0
X	122677452	ALU_umary_ALU_12778	G	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,270,+;NS=2504;SAS_AF=0;SVLEN=268;SVTYPE=ALU;TSD=null	GT	0
X	122731648	UW_VH_22194	G	<CN0>	100	PASS	AC=9;AF=0.00741722;AFR_AF=0.007;AMR_AF=0.0038;AN=2542;CIEND=0,207;CIPOS=-223,0;CS=DEL_union;EAS_AF=0.0052;END=122734078;EUR_AF=0.0157;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	122763589	DEL_pindel_54498	ACAGAGAGTGTTTTTTAATTTAGAGGACAGGTCTTATTGAAGGTAACTAATATGAATCTAGATGAGCAGAATGACTTCTGCTAAGGTT	A	.	PASS	AC=777;AF=0.205828;AFR_AF=0.1615;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.212;END=122763676;EUR_AF=0.2232;NS=2504;SAS_AF=0.2326;SVTYPE=DEL	GT	1
X	122853439	BI_GS_DEL1_B5_P3020_732	C	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0;END=122860363;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	122881186	ALU_umary_ALU_12779	C	<INS:ME:ALU>	.	PASS	AC=7;AF=0.0018543;AFR_AF=0.007;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	122922879	SVA_umary_SVA_847	G	<INS:ME:SVA>	.	PASS	AC=226;AF=0.0598675;AFR_AF=0.2124;AMR_AF=0.0248;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,29,1627,+;NS=2504;SAS_AF=0;SVLEN=1598;SVTYPE=SVA;TSD=AGAAAGTAAGATAACAG	GT	0
X	122951245	UW_VH_1317	A	<CN0>	100	PASS	AC=478;AF=0.190728;AFR_AF=0.5005;AMR_AF=0.1107;AN=2542;CIEND=0,437;CIPOS=-400,0;CS=DEL_union;EAS_AF=0.0131;END=122952841;EUR_AF=0.1319;MC=YL_CN_GWD_5934,YL_CN_YRI_5637,BI_GS_DEL1_B5_P3020_788,YL_CN_ASW_4612,EM_DL_DEL101188364;NS=2504;SAS_AF=0.0682;SVTYPE=DEL	GT	.
X	122972835	UW_VH_1339	T	<CN0>	100	PASS	AC=577;AF=0.273642;AFR_AF=0.3001;AMR_AF=0.2786;AN=2542;CIEND=0,519;CIPOS=-379,0;CS=DEL_union;EAS_AF=0.2605;END=122973660;EUR_AF=0.3316;MC=BI_GS_DEL1_B1_P3020_623,BI_GS_DEL1_B5_P3020_802;NS=2504;SAS_AF=0.1852;SVTYPE=DEL	GT	.
X	122977609	EM_DL_DEL106884	A	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0013;END=122985456;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	122987653	BI_GS_DEL1_B4_P3020_123	C	<CN0>	100	PASS	AC=9;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-47,48;CIPOS=-47,48;CS=DEL_union;EAS_AF=0.0026;END=122992301;EUR_AF=0.0065;MC=YL_CN_CHB_4720;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	122999138	BI_GS_DEL1_B5_P3020_816	A	<CN0>	100	PASS	AC=28;AF=0.0691391;AFR_AF=0.0718;AMR_AF=0.0496;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0.0969;END=123002941;EUR_AF=0.0587;MC=YL_CN_GIH_3485;NS=2504;SAS_AF=0.0613;SVTYPE=DEL	GT	.
X	123059168	YL_CN_CHB_4721	T	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=123067187;EUR_AF=0.0039;MC=EM_DL_DEL106886,BI_GS_DEL1_B4_P3021_4;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	123154776	DEL_pindel_54510	CCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCTGAAAACAAGATTTTAAAATCTGAGTATCTTTCAGAAAAAAAATAAAGTGGTGGTATATGTTATTTGATTATTCAGGATTTAATTTGTGGATTATTCATTCTTGTTTCTCCTATTGCCTCATTTGTTATTTTGCTGTTCACAAAACATAAAATTAATATTTTTCTGTTTTAGCTTAAGTAAGCTAGGAAATACAATGTTTTGAACTTTGTATATTAATTAAATATTAGTAACCATTGATGATGTTTTCTAGAGAGATAAAATTACCA	C	.	PASS	AC=916;AF=0.242649;AFR_AF=0.2213;AMR_AF=0.2576;AN=3775;CS=DEL_pindel;EAS_AF=0.2369;END=123155087;EUR_AF=0.2415;NS=2504;SAS_AF=0.2688;SVTYPE=DEL	GT	1
X	123606205	ALU_umary_ALU_12780	A	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.002;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=AAAAAAAAAAAAAAAAAAAAAA	GT	0
X	123611800	L1_umary_LINE1_3123	C	<INS:ME:LINE1>	.	PASS	AC=105;AF=0.0278146;AFR_AF=0.1007;AMR_AF=0.0057;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,5602,6009,-;NS=2504;SAS_AF=0;SVLEN=407;SVTYPE=LINE1;TSD=null	GT	0
X	123787686	UW_VH_6826	G	<CN0>	100	PASS	AC=8;AF=0.0259603;AFR_AF=0.0219;AMR_AF=0.0153;AN=2542;CIEND=0,242;CIPOS=-219,0;CS=DEL_union;EAS_AF=0.0209;END=123789168;EUR_AF=0.047;MC=BI_GS_DEL1_B1_P3021_467;NS=2504;SAS_AF=0.0223;SVTYPE=DEL	GT	.
X	123799417	DEL_pindel_54518	ATACATTTCAACCTCTTTCCAGGAGTATATCCCTTTTGCAAAAATAGGTCCACTTTTACTTGTATTGGCTCATTATTCTTCC	A	.	PASS	AC=88;AF=0.0233113;AFR_AF=0.0179;AMR_AF=0.0229;AN=3775;CS=DEL_pindel;EAS_AF=0.0275;END=123799498;EUR_AF=0.0274;NS=2504;SAS_AF=0.0223;SVTYPE=DEL	GT	0
X	123848395	L1_umary_LINE1_3124	A	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,4733,5116,+;NS=2504;SAS_AF=0;SVLEN=383;SVTYPE=LINE1;TSD=null	GT	0
X	123921260	L1_umary_LINE1_3125	T	<INS:ME:LINE1>	.	PASS	AC=150;AF=0.0397351;AFR_AF=0.1266;AMR_AF=0.0134;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0104;MEINFO=LINE1,1,6008,-;NS=2504;SAS_AF=0.0111;SVLEN=6007;SVTYPE=LINE1;TSD=CTATACACAGAATTT	GT	0
X	123988402	DEL_pindel_54521	AGAAAAGTAGATTTATCAGTCCAAACCAAAAATAAGGATGAGTATAAGTCTAGCACATATAGTATCATTCTTTTGGCTT	A	.	PASS	AC=49;AF=0.0129801;AFR_AF=0.005;AMR_AF=0.0191;AN=3775;CS=DEL_pindel;EAS_AF=0.0105;END=123988480;EUR_AF=0.017;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	0
X	123992125	BI_GS_DEL1_B2_P3021_445	C	<CN0>	100	PASS	AC=47;AF=0.0752318;AFR_AF=0.0658;AMR_AF=0.0649;AN=2542;CIEND=-11,11;CIPOS=-11,11;CS=DEL_union;EAS_AF=0.0877;END=123993412;EUR_AF=0.0927;NS=2504;SAS_AF=0.0641;SVTYPE=DEL	GT	.
X	124090199	BI_GS_DEL1_B5_P3022_73	A	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0;END=124097209;EUR_AF=0.0052;MC=YL_CN_GIH_3486;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	124115707	DEL_pindel_54524	TAAAAGCAAAAACAGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAACGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAATGCAGGAAATGAGAGAATGTCTGCCCCAGACATAGCAGCGTGTGGTAGCGTGATTTTGTCTAAGGTGAATACTGGGTTCATACCATTTTAAGCATTTTTTTTTCTTTAAGCTTCTCTCTCTCATTAGAAGCCCATTTTCTCTACGTGTAAAACAATGGAAGTATTGCCCGAAAAGGTAAAGTGTTGTGCATCTACGTGCTAACTTTTCCAGAGTTAACTCTAAAAAAATGTACTAAGTAGTTTTTGAAATTAGACTCCACTATGCATCTTAATACATAAAAGAAAATGTGAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1860;AF=0.492715;AFR_AF=0.6391;AMR_AF=0.4637;AN=3775;CS=DEL_pindel;EAS_AF=0.3927;END=124116136;EUR_AF=0.453;NS=2504;SAS_AF=0.4582;SVTYPE=DEL	GT	1
X	124175500	BI_GS_DEL1_B3_P3022_8	T	<CN0>	100	PASS	AC=12;AF=0.0413245;AFR_AF=0.0469;AMR_AF=0.0344;AN=2542;CIEND=-43,43;CIPOS=-43,43;CS=DEL_union;EAS_AF=0.0314;END=124177908;EUR_AF=0.0548;NS=2504;SAS_AF=0.0348;SVTYPE=DEL	GT	.
X	124234123	UW_VH_8911	A	<CN0>	100	PASS	AC=19;AF=0.0113907;AFR_AF=0.0229;AMR_AF=0.0095;AN=2542;CIEND=0,186;CIPOS=-142,0;CS=DEL_union;EAS_AF=0.0052;END=124236345;EUR_AF=0.0131;MC=BI_GS_DEL1_B5_P3022_195,EM_DL_DEL106895;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	124384088	L1_umary_LINE1_3126	A	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1435,5380,+;NS=2504;SAS_AF=0;SVLEN=3945;SVTYPE=LINE1;TSD=null	GT	0
X	124516877	ALU_umary_ALU_12781	G	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb6_2,18,278,+;NS=2504;SAS_AF=0;SVLEN=260;SVTYPE=ALU;TSD=null	GT	0
X	124522563	UW_VH_15064	A	<CN0>	100	PASS	AC=13;AF=0.0209271;AFR_AF=0.016;AMR_AF=0.0191;AN=2542;CIEND=0,47;CIPOS=-41,0;CS=DEL_union;EAS_AF=0.034;END=124528065;EUR_AF=0.0287;MC=UW_VH_13874;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	124553816	UW_VH_16402	A	<CN0>	100	PASS	AC=149;AF=0.213775;AFR_AF=0.2223;AMR_AF=0.1737;AN=2542;CIEND=0,236;CIPOS=-210,0;CS=DEL_union;EAS_AF=0.2134;END=124554440;EUR_AF=0.2154;MC=BI_GS_DEL1_B5_P3022_445;NS=2504;SAS_AF=0.2298;SVTYPE=DEL	GT	.
X	124591705	BI_GS_DEL1_B3_P3022_20	C	<CN0>	100	PASS	AC=18;AF=0.0315232;AFR_AF=0.0329;AMR_AF=0.0286;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0223;END=124593386;EUR_AF=0.0431;NS=2504;SAS_AF=0.0292;SVTYPE=DEL	GT	.
X	124678004	BI_GS_DEL1_B5_P3022_532	A	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0;END=124689491;EUR_AF=0.0039;MC=YL_CN_ESN_4495;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	124904994	YL_CN_GIH_3488	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=124988751;EUR_AF=0.0052;MC=BI_GS_DEL1_B5_P3022_707;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	124991759	YL_CN_TSI_4465	G	<CN0>	100	PASS	AC=20;AF=0.0188079;AFR_AF=0.0189;AMR_AF=0.0153;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0079;END=124995155;EUR_AF=0.0405;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	124992814	DEL_pindel_54531	CTTGTTAAGGTGGTATATGGTACCCAGAAGTTTGAATAATACCTTGAATTTTCACAAATGTAGGATCAGGGGTCATAGAAGAATTCCTCTTAAAAGTACATCTTGGAATTAGCATAACAGGTTGATAAAGAGCATAGGCTTTCTAAGCCTCATAGACTAGGGTTTGAAGCCTGACTCTGTCACTTAATAATAGCAGTGACCTTGGGCAAGTCACTTAACTATTTGAGTCTCAGTCTCTTCATGAATAAAATGATGATAGTAATATTTGCCTCTCAAGTATATTTTAATAACAAAATGTAATAATATGTATATTAAATGTAAAGTATAGTGCCTTGCATATAATAAGCAGTTAATCATTGTTTTACACATTGGGTGGGATTATAGTAATCCTTCATTACATATGACTTGTGTTCAGTTCAGCTTAGTTCACCAAACATTAAGTATGTACAAAGCAACAGACTCCTGCTAAGTTAACCCTAGTGATAAAAATATAAGTAAGACATGA	C	.	PASS	AC=184;AF=0.0487417;AFR_AF=0.0179;AMR_AF=0.0687;AN=3775;CS=DEL_pindel;EAS_AF=0.0694;END=124993318;EUR_AF=0.0535;NS=2504;SAS_AF=0.0501;SVTYPE=DEL	GT	1
X	125077710	DEL_pindel_54534	TAGAAATTGAACGTTATTGAACAACTATTATTTTTAAAACACTATGAAGGCCAGAATTTTATGCCAAGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1239;AF=0.328212;AFR_AF=0.3819;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.2984;END=125077946;EUR_AF=0.3003;MEINFO=LINE1,5958,5973,+;NS=2504;SAS_AF=0.3384;SVTYPE=DEL_LINE1	GT	1
X	125092337	DUP_gs.X_CNV_X_125092337_125131442	G	<CN0>,<CN2>	.	PASS	AC=4,1;AF=0.0010596,0.0002649;AFR_AF=0.003,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=125131442;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV	GT	0
X	125092796	YL_CN_ITU_4750	A	<CN0>	100	PASS	AC=12;AF=0.00423841;AFR_AF=0.009;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=125130906;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	125101247	BI_GS_DEL2_B3_P0615_1	A	<CN0>	100	PASS	AC=12;AF=0.00423841;AFR_AF=0.009;AMR_AF=0.0019;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0;END=125290547;EUR_AF=0.0078;MC=YL_CN_ESN_4496;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	125103522	DUP_gs.X_CNV_X_125103522_125119972	A	<CN0>,<CN2>	.	PASS	AC=6,9;AF=0.0015894,0.00238411;AFR_AF=0.005,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0118;END=125119972;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV	GT	0
X	125269140	BI_GS_DEL1_B3_P3023_6	G	<CN0>	100	PASS	AC=17;AF=0.0275497;AFR_AF=0.0379;AMR_AF=0.0267;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.0236;END=125271067;EUR_AF=0.0235;MC=YL_CN_PUR_5736;NS=2504;SAS_AF=0.0223;SVTYPE=DEL	GT	.
X	125372640	DEL_pindel_54536	GAGAGCTGCAGTTGGTAGAATGACCAGCTGCAGAGAGGAGCTATCCTCTCTGCTGAAAGCTGAACACTTGTTCAGACCACCTGCCTGCAGAGAGGATCCACCCTCTCCAAAGCCTCCTCTCTCCTA	G	.	PASS	AC=176;AF=0.0466225;AFR_AF=0.0459;AMR_AF=0.0573;AN=3775;CS=DEL_pindel;EAS_AF=0.0563;END=125372765;EUR_AF=0.0418;NS=2504;SAS_AF=0.0348;SVTYPE=DEL	GT	0
X	125392060	DEL_pindel_54537	ACACTGGCAAGTGCCAAGCTGCTGGCCTCTGTGTGTGCATTTGCACCAGTGGCAGTGGCAGTGTGAAGGGGCAGGGT	A	.	PASS	AC=394;AF=0.104371;AFR_AF=0.0638;AMR_AF=0.1202;AN=3775;CS=DEL_pindel;EAS_AF=0.1348;END=125392136;EUR_AF=0.1123;NS=2504;SAS_AF=0.1086;SVTYPE=DEL	GT	1
X	125487116	L1_umary_LINE1_3127	A	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,103,5984,-;NS=2504;SAS_AF=0;SVLEN=5881;SVTYPE=LINE1;TSD=ATCCAAAGCTT	GT	0
X	125560556	ALU_umary_ALU_12782	T	<INS:ME:ALU>	.	PASS	AC=29;AF=0.00768212;AFR_AF=0.0269;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null	GT	0
X	125778805	ALU_umary_ALU_12783	A	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.0028;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	125850344	BI_GS_DEL1_B4_P3023_107	G	<CN0>	100	PASS	AC=71;AF=0.0490066;AFR_AF=0.1196;AMR_AF=0.0324;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0183;END=125852884;EUR_AF=0.0248;MC=YL_CN_PUR_5737,UW_VH_8291,YL_CN_GWD_5937,YL_CN_MSL_4096;NS=2504;SAS_AF=0.0209;SVTYPE=DEL	GT	.
X	125857686	L1_umary_LINE1_3128	A	<INS:ME:LINE1>	.	PASS	AC=30;AF=0.00794702;AFR_AF=0.0219;AMR_AF=0.0057;AN=3775;CS=L1_umary;EAS_AF=0.0039;EUR_AF=0.0026;MEINFO=LINE1,5082,6019,+;NS=2504;SAS_AF=0;SVLEN=937;SVTYPE=LINE1;TSD=null	GT	0
X	125891662	BI_GS_DEL1_B2_P3023_348	T	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-29,30;CIPOS=-29,30;CS=DEL_union;EAS_AF=0;END=125926810;EUR_AF=0.0065;MC=YL_CN_IBS_4145;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	125939424	BI_GS_DEL1_B1_P3023_471	A	<CN0>	100	PASS	AC=9;AF=0.00370861;AFR_AF=0.009;AMR_AF=0;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.0026;END=125944079;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	125941756	BI_GS_DEL1_B5_P3023_612	C	<CN0>	100	PASS	AC=110;AF=0.0770861;AFR_AF=0.1575;AMR_AF=0.0534;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0406;END=125943170;EUR_AF=0.0509;MC=UW_VH_8781,EM_DL_DEL101189244;NS=2504;SAS_AF=0.0487;SVTYPE=DEL	GT	.
X	125960623	ALU_umary_ALU_12784	A	<INS:ME:ALU>	.	PASS	AC=125;AF=0.0331126;AFR_AF=0.1216;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,280,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=AAAAAACATATTAGTA	GT	0
X	125987965	BI_GS_DEL1_B2_P3023_390	C	<CN0>	100	PASS	AC=6;AF=0.00344371;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.0026;END=125990921;EUR_AF=0.0078;MC=YL_CN_KHV_5078;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	125998504	YL_CN_FIN_4358	T	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=126118892;EUR_AF=0.0078;MC=BI_GS_DEL2_B1_P0615_1,EM_DL_DEL106934;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	126122627	BI_GS_DEL1_B5_P3024_89	T	<CN0>	100	PASS	AC=67;AF=0.104901;AFR_AF=0.1117;AMR_AF=0.0935;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0916;END=126123671;EUR_AF=0.1188;NS=2504;SAS_AF=0.1031;SVTYPE=DEL	GT	.
X	126290693	ALU_umary_ALU_12785	T	<INS:ME:ALU>	.	PASS	AC=1761;AF=0.46649;AFR_AF=0.674;AMR_AF=0.4447;AN=3775;CS=ALU_umary;EAS_AF=0.449;EUR_AF=0.2533;MEINFO=AluYc1,99,281,-;NS=2504;SAS_AF=0.4387;SVLEN=182;SVTYPE=ALU;TSD=TTATTTTTACAATTCTT	GT	0
X	126330194	UW_VH_8228	A	<CN0>	100	PASS	AC=115;AF=0.123179;AFR_AF=0.1396;AMR_AF=0.1126;AN=2542;CIEND=0,317;CIPOS=-273,0;CS=DEL_union;EAS_AF=0.1021;END=126331264;EUR_AF=0.1332;MC=EM_DL_DEL101189336,BI_GS_DEL1_B4_P3024_44;NS=2504;SAS_AF=0.1198;SVTYPE=DEL	GT	.
X	126581696	L1_umary_LINE1_3129	A	<INS:ME:LINE1>	.	PASS	AC=26;AF=0.00688742;AFR_AF=0;AMR_AF=0.0115;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0078;MEINFO=LINE1,4625,5956,+;NS=2504;SAS_AF=0.0195;SVLEN=1331;SVTYPE=LINE1;TSD=null	GT	0
X	126583432	ALU_umary_ALU_12786	A	<INS:ME:ALU>	.	PASS	AC=181;AF=0.047947;AFR_AF=0.0618;AMR_AF=0.0649;AN=3775;CS=ALU_umary;EAS_AF=0.0249;EUR_AF=0.0574;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.0306;SVLEN=279;SVTYPE=ALU;TSD=AAAATATACTA	GT	0
X	126597734	BI_GS_DEL1_B2_P3024_261	T	<CN0>	100	PASS	AC=459;AF=0.175629;AFR_AF=0.1456;AMR_AF=0.4141;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0196;END=126602382;EUR_AF=0.2533;MC=EM_DL_DEL106941,YL_CN_GIH_3490,UW_VH_12983,UW_VH_2665;NS=2504;SAS_AF=0.1267;SVTYPE=DEL	GT	.
X	126759390	BI_GS_DEL2_B2_P0615_1	G	<CN0>	100	PASS	AC=11;AF=0.00291391;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0;END=126886628;EUR_AF=0.0052;MC=UW_VH_13439,YL_CN_ESN_4501;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	126779103	ALU_umary_ALU_12787	T	<INS:ME:ALU>	.	PASS	AC=10;AF=0.00264901;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0131;MEINFO=AluUndef,19,281,+;NS=2504;SAS_AF=0;SVLEN=262;SVTYPE=ALU;TSD=null	GT	0
X	126852159	BI_GS_DEL1_B1_P3024_403	G	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0;END=126947127;EUR_AF=0.0065;MC=YL_CN_GBR_4581;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	126852500	DEL_pindel_54547	ATGTAATTTGTTTTCAAAAACTTTCCCACACACAAAAAAACTTTAGGCTCAG	A	.	PASS	AC=703;AF=0.186225;AFR_AF=0.1874;AMR_AF=0.1718;AN=3775;CS=DEL_pindel;EAS_AF=0.2094;END=126852551;EUR_AF=0.1749;NS=2504;SAS_AF=0.1825;SVTYPE=DEL	GT	1
X	126901433	BI_GS_DEL1_B5_P3024_598	A	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-34,35;CIPOS=-34,35;CS=DEL_union;EAS_AF=0;END=126909608;EUR_AF=0.0091;MC=UW_VH_23134,YL_CN_PEL_4387;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	126945026	BI_GS_DEL2_B5_P0615_1	G	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0;END=127075666;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	127026713	DEL_pindel_54549	AAAATTTTCTGCTTTTTTGATACAGGCATTTGTTGCTATAAACTTCCCTCTTAGTATTGCTTTTGTCATAACCCTT	A	.	PASS	AC=1111;AF=0.294305;AFR_AF=0.2841;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2893;END=127026788;EUR_AF=0.2794;NS=2504;SAS_AF=0.3315;SVTYPE=DEL	GT	0
X	127115869	YL_CN_GWD_5941	C	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=127152716;EUR_AF=0.0052;MC=BI_GS_DEL1_B3_P3025_3,EM_DL_DEL106950;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	127142095	YL_CN_CHB_4727	T	<CN0>	100	PASS	AC=11;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=127241872;EUR_AF=0.0065;MC=BI_GS_DEL1_B4_P3025_18;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	127356141	ALU_umary_ALU_12788	C	<INS:ME:ALU>	.	PASS	AC=23;AF=0.00609272;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.032;SVLEN=280;SVTYPE=ALU;TSD=AAAAATTAAGGTAACTCTGC	GT	0
X	127369849	YL_CN_CDX_3887	A	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=127511416;EUR_AF=0.0065;MC=BI_GS_DEL2_B1_P0615_2;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	127391777	YL_CN_PUR_5740	A	<CN0>	100	PASS	AC=11;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=127427976;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	127412105	L1_umary_LINE1_3130	A	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,3782,4928,-;NS=2504;SAS_AF=0;SVLEN=1146;SVTYPE=LINE1;TSD=null	GT	0
X	127415839	UW_VH_13355	A	<CN0>	100	PASS	AC=11;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,70;CIPOS=-75,0;CS=DEL_union;EAS_AF=0.0052;END=127432267;EUR_AF=0.0052;MC=EM_DL_DEL106957,BI_GS_DEL1_B4_P3025_56,YL_CN_CHB_4728;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	127452736	BI_GS_DEL1_B5_P3025_331	C	<CN0>	100	PASS	AC=8;AF=0.00582781;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-20,20;CIPOS=-20,20;CS=DEL_union;EAS_AF=0.0065;END=127456285;EUR_AF=0.0131;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	127498484	DEL_pindel_54556	CTGGTTAGTGCTGGTCTAAATAGTCCTTCGGTGGGTGTCACCTAGATTCAGCCCCAGTTTCCTTTCTGCTGTGAGGGACTAGCACTAAATTCAATGAAA	C	.	PASS	AC=136;AF=0.0360265;AFR_AF=0.0279;AMR_AF=0.0305;AN=3775;CS=DEL_pindel;EAS_AF=0.0563;END=127498582;EUR_AF=0.0339;NS=2504;SAS_AF=0.032;SVTYPE=DEL	GT	1
X	127612684	ALU_umary_ALU_12789	C	<INS:ME:ALU>	.	PASS	AC=25;AF=0.00662252;AFR_AF=0.0199;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	127705419	BI_GS_DEL1_B2_P3025_325	G	<CN0>	100	PASS	AC=15;AF=0.0368212;AFR_AF=0.0309;AMR_AF=0.0401;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0.0288;END=127706892;EUR_AF=0.0548;NS=2504;SAS_AF=0.032;SVTYPE=DEL	GT	.
X	127716133	YL_CN_JPT_4770	C	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=127757765;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	127763536	ALU_umary_ALU_12790	T	<INS:ME:ALU>	.	PASS	AC=170;AF=0.0450331;AFR_AF=0.0897;AMR_AF=0.0172;AN=3775;CS=ALU_umary;EAS_AF=0.0131;EUR_AF=0.0457;MEINFO=AluUndef,168,281,-;NS=2504;SAS_AF=0.0362;SVLEN=113;SVTYPE=ALU;TSD=null	GT	0
X	127815549	UW_VH_10434	T	<CN0>	100	PASS	AC=26;AF=0.0566887;AFR_AF=0.0528;AMR_AF=0.0649;AN=2542;CIEND=0,251;CIPOS=-275,0;CS=DEL_union;EAS_AF=0.038;END=127816839;EUR_AF=0.077;MC=BI_GS_DEL1_B2_P3025_377;NS=2504;SAS_AF=0.0543;SVTYPE=DEL	GT	.
X	127943444	DEL_pindel_54557	TTACGGGACCCTTGATCCCTTCAAAATCTCCATATCTTCTTGCTGAGGCCTGAAATCCCTTTATACATGGAAAAACTCATTGTGGAATTAAAAAGCAAA	T	.	PASS	AC=1062;AF=0.281325;AFR_AF=0.2622;AMR_AF=0.2615;AN=3775;CS=DEL_pindel;EAS_AF=0.2853;END=127943542;EUR_AF=0.282;NS=2504;SAS_AF=0.3175;SVTYPE=DEL	GT	1
X	128041065	DEL_pindel_54560	CCCAAGTTGAATCAAAATGTCACTGCTTCAAGGGTTTGTATGTGAGCCCTACAATCCTGTTCTTGGTT	C	.	PASS	AC=600;AF=0.15894;AFR_AF=0.1186;AMR_AF=0.1889;AN=3775;CS=DEL_pindel;EAS_AF=0.1636;END=128041132;EUR_AF=0.1697;NS=2504;SAS_AF=0.1769;SVTYPE=DEL	GT	1
X	128046284	DEL_pindel_54561	AAAAAAATATTTTAAAGCTGTCTGTAGCTGCTCATAAATTGAATTTTGTAGCATGTGATTGACTTCCTGCCAAGAACATTTGCTTGTTCCAACTTAGTCTGCTTTATCTAGATACAGT	A	.	PASS	AC=974;AF=0.258013;AFR_AF=0.2403;AMR_AF=0.2691;AN=3775;CS=DEL_pindel;EAS_AF=0.2474;END=128046401;EUR_AF=0.2559;NS=2504;SAS_AF=0.2883;SVTYPE=DEL	GT	1
X	128046771	DUP_gs.X_CNV_X_128046771_128070740	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=128070740;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	128216094	DEL_pindel_54563	GTGACATCTGGCAACATGACCCTTGAGCAGTAAGGCATTATAAAAACTATGCCTA	G	.	PASS	AC=810;AF=0.21457;AFR_AF=0.1775;AMR_AF=0.2233;AN=3775;CS=DEL_pindel;EAS_AF=0.2212;END=128216148;EUR_AF=0.2285;NS=2504;SAS_AF=0.2382;SVTYPE=DEL	GT	1
X	128269800	ALU_umary_ALU_12791	C	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,233,+;NS=2504;SAS_AF=0;SVLEN=232;SVTYPE=ALU;TSD=null	GT	0
X	128320396	BI_GS_DEL1_B1_P3026_212	A	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0;END=128327515;EUR_AF=0.0091;MC=YL_CN_FIN_4360,EM_DL_DEL106971;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	128348971	DEL_pindel_54567	ACATGTTCCAATCCACCTTCTGTGGGTTGTAGTTCCAAAGGCCATTCCATTTTTAAGACCTTTACAC	A	.	PASS	AC=138;AF=0.0365563;AFR_AF=0.0229;AMR_AF=0.0382;AN=3775;CS=DEL_pindel;EAS_AF=0.0406;END=128349037;EUR_AF=0.0366;NS=2504;SAS_AF=0.0501;SVTYPE=DEL	GT	1
X	128375466	UW_VH_10405	A	<CN0>	100	PASS	AC=103;AF=0.050596;AFR_AF=0.1167;AMR_AF=0.0324;AN=2542;CIEND=0,214;CIPOS=-174,0;CS=DEL_union;EAS_AF=0.0249;END=128378855;EUR_AF=0.0222;MC=BI_GS_DEL1_B5_P3026_357,YL_CN_GWD_5942;NS=2504;SAS_AF=0.0292;SVTYPE=DEL	GT	.
X	128379356	BI_GS_DEL1_B2_P3026_196	G	<CN0>	100	PASS	AC=9;AF=0.00582781;AFR_AF=0.006;AMR_AF=0.0095;AN=2542;CIEND=-30,31;CIPOS=-30,31;CS=DEL_union;EAS_AF=0.0013;END=128382898;EUR_AF=0.0065;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	128499485	DEL_pindel_54573	GATATATATATATATATATATATATATATATATATATATATATATATATATATAT	G	.	PASS	AC=1028;AF=0.272318;AFR_AF=0.2762;AMR_AF=0.2576;AN=3775;CS=DEL_pindel;EAS_AF=0.2749;END=128499539;EUR_AF=0.2441;NS=2504;SAS_AF=0.305;SVTYPE=DEL	GT	1
X	128500439	BI_GS_DEL1_B5_P3026_448	G	<CN0>	100	PASS	AC=563;AF=0.22543;AFR_AF=0.2931;AMR_AF=0.2576;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1911;END=128502436;EUR_AF=0.2363;MC=YL_CN_CDX_3889,UW_VH_2641,EM_DL_DEL101189797,YL_CN_MXL_3790;NS=2504;SAS_AF=0.1323;SVTYPE=DEL	GT	.
X	128661031	UW_VH_9421	G	<CN0>	100	PASS	AC=10;AF=0.00344371;AFR_AF=0.008;AMR_AF=0.0038;AN=2542;CIEND=0,317;CIPOS=-220,0;CS=DEL_union;EAS_AF=0;END=128665656;EUR_AF=0.0039;MC=EM_DL_DEL106977,BI_GS_DEL1_B3_P3026_23,YL_CN_ESN_4504;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	128794882	DEL_pindel_54580	TCTTTCCTCACTGAACATCAAGAAGCAGTTTCTCGGGAGGCTGAGGCCGGGGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGACTGGGTGACAGAGTGAGACTCTGTCTCCAAAAAAAAAAAAGAAGCAGTTTCTCACTTTTTGGGTCCACCTATCACTTTATTTGAACTTCTAGCACCTAACTCATACTGTCTTGAATTAGGAAGCCATGAAGTACATAGTGGTTAAGCACATGGGTTCTAGAATAAGGCAGCTCTGTCTCTTACTACATAGGTAA	T	.	PASS	AC=127;AF=0.0336424;AFR_AF=0.016;AMR_AF=0.0324;AN=3775;CS=DEL_pindel;EAS_AF=0.0236;END=128795189;EUR_AF=0.0705;NS=2504;SAS_AF=0.0306;SVTYPE=DEL	GT	0
X	128927263	ALU_umary_ALU_12792	C	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,1,261,+;NS=2504;SAS_AF=0;SVLEN=260;SVTYPE=ALU;TSD=AGAATTTC	GT	0
X	129025580	BI_GS_DEL1_B5_P3027_16	A	<CN0>	100	PASS	AC=13;AF=0.0143046;AFR_AF=0.015;AMR_AF=0.0095;AN=2542;CIEND=-43,44;CIPOS=-43,44;CS=DEL_union;EAS_AF=0.0157;END=129027905;EUR_AF=0.0104;MC=UW_VH_22390;NS=2504;SAS_AF=0.0195;SVTYPE=DEL	GT	.
X	129072766	YL_CN_STU_4665	C	<CN0>	100	PASS	AC=6;AF=0.00874172;AFR_AF=0.006;AMR_AF=0.0115;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0065;END=129075856;EUR_AF=0.0144;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	129079658	UW_VH_5081	A	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,92;CIPOS=-100,0;CS=DEL_union;EAS_AF=0.0026;END=129085507;EUR_AF=0.0065;MC=EM_DL_DEL106984,YL_CN_FIN_4362,BI_GS_DEL1_B1_P3027_49;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	129094010	UW_VH_22124	A	<CN0>	100	PASS	AC=5;AF=0.0169536;AFR_AF=0.011;AMR_AF=0.0115;AN=2542;CIEND=0,95;CIPOS=-112,0;CS=DEL_union;EAS_AF=0.0196;END=129096747;EUR_AF=0.0209;NS=2504;SAS_AF=0.0223;SVTYPE=DEL	GT	.
X	129503580	L1_umary_LINE1_3131	A	<INS:ME:LINE1>	.	PASS	AC=8;AF=0.00211921;AFR_AF=0.008;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2199,6015,+;NS=2504;SAS_AF=0;SVLEN=3816;SVTYPE=LINE1;TSD=null	GT	0
X	129511350	YL_CN_ESN_4505	G	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=129524045;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	129511568	DUP_gs.X_CNV_X_129511568_129523970	T	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0.001,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=129523970;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	129511736	DUP_gs.X_CNV_X_129511736_129531248	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=129531248;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	129525281	L1_umary_LINE1_3132	T	<INS:ME:LINE1>	.	PASS	AC=1249;AF=0.330861;AFR_AF=0.2094;AMR_AF=0.3168;AN=3775;CS=L1_umary;EAS_AF=0.3233;EUR_AF=0.436;MEINFO=LINE1,5014,6018,-;NS=2504;SAS_AF=0.4067;SVLEN=1004;SVTYPE=LINE1;TSD=CACATATCTCTT	GT	0
X	129570944	DUP_gs.X_CNV_X_129570944_129597534	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=129597534;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	129600508	L1_umary_LINE1_3133	C	<INS:ME:LINE1>	.	PASS	AC=7;AF=0.0018543;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0092;EUR_AF=0;MEINFO=LINE1,4013,6018,-;NS=2504;SAS_AF=0;SVLEN=2005;SVTYPE=LINE1;TSD=null	GT	0
X	129600830	BI_GS_DEL1_B2_P3027_260	A	<CN0>	100	PASS	AC=4;AF=0.0013245;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.0013;END=129606538;EUR_AF=0.0026;MC=YL_CN_KHV_5081;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	129636757	YL_CN_PJL_5105	C	<CN0>	100	PASS	AC=5;AF=0.00503311;AFR_AF=0.006;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0079;END=129644089;EUR_AF=0.0078;MC=BI_GS_DEL1_B3_P3027_17;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	129667605	BI_GS_DEL1_B4_P3027_85	G	<CN0>	100	PASS	AC=83;AF=0.0627815;AFR_AF=0.1346;AMR_AF=0.042;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0445;END=129668877;EUR_AF=0.0418;MC=UW_VH_6546,EM_DL_DEL101190116,YL_CN_ACB_5148;NS=2504;SAS_AF=0.0195;SVTYPE=DEL	GT	.
X	129860417	YL_CN_ESN_4506	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=129870832;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	130005063	YL_CN_CHB_4732	A	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=130017222;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	130136840	L1_umary_LINE1_3134	A	<INS:ME:LINE1>	.	PASS	AC=126;AF=0.0333775;AFR_AF=0.0389;AMR_AF=0.0286;AN=3775;CS=L1_umary;EAS_AF=0.0144;EUR_AF=0.0209;MEINFO=LINE1,4696,5190,-;NS=2504;SAS_AF=0.0627;SVLEN=494;SVTYPE=LINE1;TSD=null	GT	0
X	130153667	BI_GS_DEL1_B2_P3028_81	A	<CN0>	100	PASS	AC=5;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0.0026;END=130157946;EUR_AF=0.0065;MC=YL_CN_ACB_5150;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	130224846	ALU_umary_ALU_12793	C	<INS:ME:ALU>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.0056;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	130230734	SVA_umary_SVA_848	T	<INS:ME:SVA>	.	PASS	AC=39;AF=0.0103311;AFR_AF=0.002;AMR_AF=0.0019;AN=3775;CS=SVA_umary;EAS_AF=0.0314;EUR_AF=0.0026;MEINFO=SVA,1381,1604,-;NS=2504;SAS_AF=0.0139;SVLEN=223;SVTYPE=SVA;TSD=GGTGCTAGTCCTTCTTT	GT	0
X	130271072	DEL_pindel_54589	CTATATGTATATATGGAACATATGTACGTGGAATATATGTAGATACGGAACATATATACGCGGAA	C	.	PASS	AC=467;AF=0.123709;AFR_AF=0.1117;AMR_AF=0.0992;AN=3775;CS=DEL_pindel;EAS_AF=0.161;END=130271136;EUR_AF=0.0966;NS=2504;SAS_AF=0.1476;SVTYPE=DEL	GT	1
X	130274755	DEL_pindel_54590	TTGATTTAGTTCTGTATTGATTTAGTTCTAGTCTTTCTTCAGTTCTATAGATGAGATTTCACACTTATAAA	T	.	PASS	AC=839;AF=0.222252;AFR_AF=0.2044;AMR_AF=0.2176;AN=3775;CS=DEL_pindel;EAS_AF=0.2395;END=130274825;EUR_AF=0.2154;NS=2504;SAS_AF=0.2396;SVTYPE=DEL	GT	1
X	130294764	BI_GS_DEL1_B1_P3028_188	G	<CN0>	100	PASS	AC=8;AF=0.00291391;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.0052;END=130303951;EUR_AF=0.0052;MC=YL_CN_CDX_3890;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	130377774	UW_VH_5635	A	<CN0>	100	PASS	AC=207;AF=0.216159;AFR_AF=0.2024;AMR_AF=0.1947;AN=2542;CIEND=0,425;CIPOS=-413,0;CS=DEL_union;EAS_AF=0.2474;END=130378680;EUR_AF=0.1841;MC=BI_GS_DEL1_B2_P3028_202;NS=2504;SAS_AF=0.2521;SVTYPE=DEL	GT	.
X	130419609	DUP_gs.X_CNV_X_130419609_130499134	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=130499134;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	130489210	DUP_gs.X_CNV_X_130489210_130572918	C	<CN0>,<CN2>	.	PASS	AC=2,2;AF=0.0005298,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=130572918;EUR_AF=0,0;NS=2504;SAS_AF=0.0028,0;SVTYPE=CNV	GT	0
X	130529213	UW_VH_5983	G	<CN0>	100	PASS	AC=19;AF=0.0384106;AFR_AF=0.0349;AMR_AF=0.0363;AN=2542;CIEND=0,334;CIPOS=-390,0;CS=DEL_union;EAS_AF=0.0419;END=130530823;EUR_AF=0.047;NS=2504;SAS_AF=0.032;SVTYPE=DEL	GT	.
X	130540495	L1_umary_LINE1_3135	A	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5286,5610,-;NS=2504;SAS_AF=0.0028;SVLEN=324;SVTYPE=LINE1;TSD=null	GT	0
X	130546244	UW_VH_10633	C	<CN0>	100	PASS	AC=7;AF=0.0206622;AFR_AF=0.014;AMR_AF=0.0229;AN=2542;CIEND=0,219;CIPOS=-214,0;CS=DEL_union;EAS_AF=0.0223;END=130547839;EUR_AF=0.03;MC=BI_GS_DEL1_B1_P3028_367;NS=2504;SAS_AF=0.0167;SVTYPE=DEL	GT	.
X	130760146	DUP_gs.X_CNV_X_130760146_130811378	T	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=130811378;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	130778548	BI_GS_DEL1_B4_P3028_120	T	<CN0>	100	PASS	AC=10;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.0079;END=130793457;EUR_AF=0.0052;MC=YL_CN_CHS_4785;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	130789467	DUP_gs.X_CNV_X_130789467_130847286	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=130847286;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	130838070	BI_GS_DEL1_B3_P3028_31	G	<CN0>	100	PASS	AC=21;AF=0.0296689;AFR_AF=0.0309;AMR_AF=0.0305;AN=2542;CIEND=-15,15;CIPOS=-15,15;CS=DEL_union;EAS_AF=0.0406;END=130839578;EUR_AF=0.0352;NS=2504;SAS_AF=0.0097;SVTYPE=DEL	GT	.
X	130838636	DUP_gs.X_CNV_X_130838636_130868183	G	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=130868183;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	130921955	ALU_umary_ALU_12794	T	<INS:ME:ALU>	.	PASS	AC=1236;AF=0.327417;AFR_AF=0.1964;AMR_AF=0.2328;AN=3775;CS=ALU_umary;EAS_AF=0.5092;EUR_AF=0.2859;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4304;SVLEN=280;SVTYPE=ALU;TSD=GTCACATTTTCTT	GT	0
X	131005357	UW_VH_2807	A	<CN0>	100	PASS	AC=703;AF=0.282384;AFR_AF=0.1825;AMR_AF=0.2214;AN=2542;CIEND=0,191;CIPOS=-257,0;CS=DEL_union;EAS_AF=0.5026;END=131008631;EUR_AF=0.2533;MC=YL_CN_CHS_4786,YL_CN_MXL_3791,BI_GS_DEL1_B3_P3029_2,EM_DL_DEL107027;NS=2504;SAS_AF=0.2632;SVTYPE=DEL	GT	.
X	131089382	BI_GS_DEL1_B5_P3029_82	G	<CN0>	100	PASS	AC=951;AF=0.517351;AFR_AF=0.4526;AMR_AF=0.4599;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6309;END=131089611;EUR_AF=0.4974;MC=UW_VH_1939;NS=2504;SAS_AF=0.5501;SVTYPE=DEL	GT	.
X	131138014	DEL_pindel_54605	GTCTCCATCTCTTGACCTAGCTTGTTGTAAAAAAGTTATATAAAAGCTGTGAAAATAATCTAAAGCACAATATAGATGTAGTAGAT	G	.	PASS	AC=667;AF=0.176689;AFR_AF=0.1864;AMR_AF=0.1546;AN=3775;CS=DEL_pindel;EAS_AF=0.2094;END=131138099;EUR_AF=0.1358;NS=2504;SAS_AF=0.188;SVTYPE=DEL	GT	1
X	131303138	DUP_gs.X_CNV_X_131303138_131444024	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=131444024;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	131473061	DEL_pindel_54608	GGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATCACCATTCTAATTGGTGTGAGATGGTATCTCATTGT	G	.	PASS	AC=1022;AF=0.270728;AFR_AF=0.2702;AMR_AF=0.2595;AN=3775;CS=DEL_pindel;EAS_AF=0.2579;END=131473278;EUR_AF=0.2768;NS=2504;SAS_AF=0.2869;SVTYPE=DEL	GT	1
X	131509268	DEL_pindel_54609	TTGCCAAAGCAACAACTAAATATAATTAGATAACAATTATTATTTGTATATAAAGTTAAATTTGTTCTTAAATTGTGAACTGTAAAGGATAGTTTTGGACTATAATCTGTATCTTGTCATACTTCAGTGTCAGTTCAGAACCTAGCTAGGCGGGCAGAATCCATGCAGTAAAAGCTTAAACTTTCTTTAACTTTCCTTTGAAATTAAATTGATTAGTTACTTAGAGCTACAAAAAAGCAATAAAATGAAACCTTAAAGATGAACAATAAGAAAAATGAAAATATGGTACCAATTAGTGAGTTATATTTACAGTTTGATTAGGCTAGTAACTAAATTTACAAAAAAAGTTGTTA	T	.	PASS	AC=1007;AF=0.266755;AFR_AF=0.2562;AMR_AF=0.2634;AN=3775;CS=DEL_pindel;EAS_AF=0.2749;END=131509620;EUR_AF=0.2611;NS=2504;SAS_AF=0.2813;SVTYPE=DEL	GT	1
X	131694553	BI_GS_DEL1_B2_P3029_350	G	<CN0>	100	PASS	AC=66;AF=0.159735;AFR_AF=0.1725;AMR_AF=0.166;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.1414;END=131695226;EUR_AF=0.1606;NS=2504;SAS_AF=0.156;SVTYPE=DEL	GT	.
X	131695169	L1_umary_LINE1_3136	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,2235,5735,-;NS=2504;SAS_AF=0;SVLEN=3500;SVTYPE=LINE1;TSD=null	GT	0
X	131715059	BI_GS_DEL1_B2_P3029_355	T	<CN0>	100	PASS	AC=170;AF=0.253775;AFR_AF=0.2592;AMR_AF=0.2653;AN=2542;CIEND=-66,67;CIPOS=-66,67;CS=DEL_union;EAS_AF=0.233;END=131715696;EUR_AF=0.235;NS=2504;SAS_AF=0.2799;SVTYPE=DEL	GT	.
X	131744890	UW_VH_7545	G	<CN0>	100	PASS	AC=258;AF=0.282914;AFR_AF=0.2473;AMR_AF=0.3721;AN=2542;CIEND=0,326;CIPOS=-442,0;CS=DEL_union;EAS_AF=0.2749;END=131745334;EUR_AF=0.252;MC=BI_GS_DEL1_B1_P3029_479;NS=2504;SAS_AF=0.3092;SVTYPE=DEL	GT	.
X	131905529	DUP_gs.X_CNV_X_131905529_131911902	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=131911902;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	131913728	UW_VH_10260	A	<CN0>	100	PASS	AC=148;AF=0.202119;AFR_AF=0.2064;AMR_AF=0.2004;AN=2542;CIEND=0,274;CIPOS=-291,0;CS=DEL_union;EAS_AF=0.1414;END=131914343;EUR_AF=0.2454;MC=BI_GS_DEL1_B5_P3029_807;NS=2504;SAS_AF=0.2159;SVTYPE=DEL	GT	.
X	131920802	BI_GS_DEL1_B3_P3029_38	A	<CN0>	100	PASS	AC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-23,23;CIPOS=-23,23;CS=DEL_union;EAS_AF=0;END=131927249;EUR_AF=0.0065;MC=YL_CN_BEB_3748;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	131939439	UW_VH_1661	A	<CN0>	100	PASS	AC=49;AF=0.0227815;AFR_AF=0.012;AMR_AF=0.0248;AN=2542;CIEND=0,352;CIPOS=-368,0;CS=DEL_union;EAS_AF=0.0013;END=131941566;EUR_AF=0.0731;MC=YL_CN_ACB_5152,YL_CN_CEU_5494,BI_GS_DEL1_B4_P3029_162;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	131951321	BI_GS_DEL1_B5_P3029_846	G	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=131958840;EUR_AF=0.0052;MC=UW_VH_25364;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	132221059	L1_umary_LINE1_3137	T	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3029,3914,-;NS=2504;SAS_AF=0;SVLEN=885;SVTYPE=LINE1;TSD=null	GT	0
X	132537103	DEL_pindel_54617	AGAGCACCACGCTCTAGGTTAAGGGGTAAAAAAACATGTTTTCCTTTTCCTTTCCTTACTTAGGCATCTAGGACTGAATGTATGCAAAAGTTAAAAATAAATGAGATAGCTTAAAATAATTAGATTTAAAAAGGGTTATCTTAGCCTGTTTGGGCTGCTAAAACAAAATACCAAAGATTGGGTGGCTTCTAAACAACAGAAATTTATTGCTTGCAGTTCTGGAGGCCAGGAAGTCCAAGATCAAGATGCTGGTAGATTGGGTTCTGGTAAGGGCATGCTTCCTCATAGAGGGCCATCTTCTCACCGTAATTTCATGTGGCGCAAGTGTTAACGGTTTTCTCTGGGGCCTCTTTTATAAGGGCACTAATCACATTCATGAGGGTTTACCTCCCAGAGACTCCACCTCCTAATACCATCACCTTGAGGGTTAGGATTTCAACATATGAATTTTAGAAGAATAGAGTAAGAGCACAGCAGATATGAATAAAAATATCTCGTCCTGGAATGAGTACAGAAACAAAAAGTCATGCTTAACGTTCCTGAGCACCTACCACATGCCATGCAGTATGTTAGGAACTGGGGATACATGGTTTCTCAGATCTGGCATGATAGGGCACATAGAGCTGCCTTTTTTTTTTTTTGACAGAGTCTCACTCTGTCGCCCAAGCTGGGGTGTAGTGGTGTGATCTTGGCTTGCTGCAATCTCTGCCTCCCAAGTTCAAACAATCCTTGTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCATACCACCACACCCCAGCTAATTTTTGTGTTTTTAGTC	A	.	PASS	AC=289;AF=0.0765563;AFR_AF=0.0279;AMR_AF=0.1202;AN=3775;CS=DEL_pindel;EAS_AF=0.0628;END=132537908;EUR_AF=0.1214;NS=2504;SAS_AF=0.0794;SVTYPE=DEL	GT	0
X	132658201	BI_GS_DEL1_B3_P3030_17	A	<CN0>	100	PASS	AC=12;AF=0.00370861;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-34,35;CIPOS=-34,35;CS=DEL_union;EAS_AF=0.0026;END=132663275;EUR_AF=0.0065;MC=UW_VH_13632;NS=2504;SAS_AF=0.007;SVTYPE=DEL	GT	.
X	132769210	DEL_pindel_54625	GTAAACTCCTTGCTCTGTAGAAATTAGTCATTTCTAAGGTATACTAACTCTTTTACCTATGCAAAATACTTTTATCCAACAACACGAAAATGACAAGAAAGTGAAAATGGACCAGAAGGAGAGCACTTATTTGAGTTATGCTGTGAGGCCTGGAGGTCTCTGGGACACAGCCAAGGCCAGTAGCAGTTTAAAAGAGTGACAACTTAAAGCACCTCCATCTACAGTAGAAAGCAATCATGTGACAAAGTAGGGAAGTCTATTTTAGAAATGT	G	.	PASS	AC=1167;AF=0.309139;AFR_AF=0.3001;AMR_AF=0.3034;AN=3775;CS=DEL_pindel;EAS_AF=0.3128;END=132769480;EUR_AF=0.2924;NS=2504;SAS_AF=0.3398;SVTYPE=DEL	GT	1
X	133004651	ALU_umary_ALU_12795	T	<INS:ME:ALU>	.	PASS	AC=25;AF=0.00662252;AFR_AF=0.0219;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb11,1,260,-;NS=2504;SAS_AF=0;SVLEN=259;SVTYPE=ALU;TSD=TAAAATGAGGATCTT	GT	0
X	133086929	L1_umary_LINE1_3138	T	<INS:ME:LINE1>	.	PASS	AC=10;AF=0.00264901;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5225,5890,+;NS=2504;SAS_AF=0.0139;SVLEN=665;SVTYPE=LINE1;TSD=null	GT	0
X	133295126	BI_GS_DEL1_B5_P3031_240	G	<CN0>	100	PASS	AC=10;AF=0.00397351;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=133298458;EUR_AF=0.0091;MC=EM_DL_DEL107144;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	133347721	BI_GS_DEL1_B4_P3031_49	G	<CN0>	100	PASS	AC=20;AF=0.00900662;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0026;END=133352266;EUR_AF=0.0339;MC=YL_CN_GBR_4585,UW_VH_2434;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	133347752	DUP_gs.X_CNV_X_133347752_133352160	A	<CN0>,<CN2>	.	PASS	AC=25,3;AF=0.00662252,0.0007947;AFR_AF=0.001,0;AMR_AF=0.0057,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=133352160;EUR_AF=0.0274,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	133367997	DEL_pindel_54629	AGAGTGAGACCCCGTCGCAAAAAAAAAAAAAATATATATATATATAATTATATATATATATAATATTATATATATATATACACATACTTATAAATGTATATGTTTTCATTGCCCCAAATAGCCCAGGTTTGAGGCTACTGAAACTAGGATCATTTTCCAGGGCAATCAAAAGTAGCCTATTTTGCTGCATGATCCAAGAAAAAAATCACATTACTTCTCTGAGTCTCAGTCTCCCAC	A	.	PASS	AC=950;AF=0.251656;AFR_AF=0.2393;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=133368233;EUR_AF=0.2507;NS=2504;SAS_AF=0.2841;SVTYPE=DEL	GT	1
X	133394234	BI_GS_DEL1_B2_P3031_181	A	<CN0>	100	PASS	AC=40;AF=0.0148344;AFR_AF=0.0459;AMR_AF=0.0019;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0026;END=133397211;EUR_AF=0.0052;MC=UW_VH_12659,YL_CN_GWD_5947;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	133520874	BI_GS_DEL1_B1_P3031_322	C	<CN0>	100	PASS	AC=7;AF=0.00609272;AFR_AF=0.002;AMR_AF=0.0057;AN=2542;CIEND=-24,25;CIPOS=-24,25;CS=DEL_union;EAS_AF=0.0026;END=133523028;EUR_AF=0.0183;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	133669226	DEL_pindel_54633	GCCGGGCGTGGTGGCTCATCCTTGCACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGGTCCGGAGTTTGAGA	G	.	PASS	AC=1044;AF=0.276556;AFR_AF=0.2592;AMR_AF=0.2901;AN=3775;CS=DEL_pindel;EAS_AF=0.2631;END=133669299;EUR_AF=0.2676;NS=2504;SAS_AF=0.3148;SVTYPE=DEL	GT	1
X	133864428	BI_GS_DEL1_B3_P3031_21	A	<CN0>	100	PASS	AC=12;AF=0.0370861;AFR_AF=0.0339;AMR_AF=0.0382;AN=2542;CIEND=-20,21;CIPOS=-20,21;CS=DEL_union;EAS_AF=0.0249;END=133865788;EUR_AF=0.0496;NS=2504;SAS_AF=0.0404;SVTYPE=DEL	GT	.
X	134006110	ALU_umary_ALU_12796	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,15,281,+;NS=2504;SAS_AF=0;SVLEN=266;SVTYPE=ALU;TSD=null	GT	0
X	134161502	DEL_pindel_54641	TTAAAACCACAGTGAGTAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGCAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCCCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAATAAAAAAAAAAAA	T	.	PASS	AC=1831;AF=0.485033;AFR_AF=0.5244;AMR_AF=0.5038;AN=3775;CS=DEL_pindel;EAS_AF=0.4463;END=134162053;EUR_AF=0.5261;MEINFO=LINE1,5521,5597,+;NS=2504;SAS_AF=0.4136;SVTYPE=DEL_LINE1	GT	1
X	134234489	DUP_gs.X_CNV_X_134234489_134323535	A	<CN0>,<CN2>	.	PASS	AC=0,5;AF=0,0.0013245;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=134323535;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	134296467	DUP_gs.X_CNV_X_134296467_134343085	A	<CN0>,<CN2>	.	PASS	AC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=134343085;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	134309593	DEL_pindel_54643	TGGTTCGGAAGACGTTAGATCCCAGCTCAACTCAGCTGTTTCCTGGCTTTGCAACCTGTCCTCAGGGTCTGACACAGCAGCAACTTGTAAGTAAAATCAGCCAATAAATTGAGTTTTCTTGCAGATCAGTGATCCAGCCTCCCTCGTGCACATGAGTTGCACCATGGAGTAAAATGTTACTCCTTTCATTACAAAAGCTACACTGGAAATAAGTGTTGGACTAGTGTTTAGACAAATATTTCTATAAGAATAGAGTGACAAGGCTTTAAATGACATGTATCAATAAGTATATTATTCATTATGATTTAATGGATAGGGACAATTCCCATCGATGGGAATTTTGGTTTCCTCATGTGATGGGAGTTTTTCCAATTCATATCTTTGTTTTTCAAAACACAATAAGTGTTTGGATTGCTTTTATTTGTTACAGAATGTCAATGTCAGCTCTCCGTTGTCTTAGCTTTGTCGGCTATAACAATATACCACAGACATTTATATTGCACAGTTCTGGACGCTGGCAGGTCCAAGAATAAGGTGCTGACTGATTCGGTTCGGGGCAAGGGCCCTCTTTCTGGCTCAAAGATTGTCAAATTCTGGCTGTTTCCTCCCATGGAGGAGTGGGAGCAAACAGTGGCTTCTCTTCCTCTTCTTCTAAGGATACTAATTCCATTATGGAGCTCTACTCTCATGATCCCATCTAAGCCTAATAGCATCCCAAAGGCCCCATCTCCATATAGATCACATTGGGGATTACAGCTTCAACAAAGGAATTTTAGGGGAACACAGATGTTCAGTGCCCCTAACCACTGTGAGGTATGTTCATTATACTATCAAAATAACTTGTACCTTTTGTTTCCTTTCTTTTTCTTTCTTTGTCTTTTTTCTTTTTTCTTTTTTTAGGTGGAGTCTCCCTCTGTCGCCCAGGCTTGACTGCATTGGCATGATCTTGGCTCACTGCAACCTCAGCCTCCTG	T	.	PASS	AC=666;AF=0.176424;AFR_AF=0.1306;AMR_AF=0.1813;AN=3775;CS=DEL_pindel;EAS_AF=0.2055;END=134310565;EUR_AF=0.171;NS=2504;SAS_AF=0.2117;SVTYPE=DEL	GT	1
X	134329722	DUP_gs.X_CNV_X_134329722_134507064	A	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=134507064;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	134390717	DUP_gs.X_CNV_X_134390717_134438346	T	<CN0>,<CN2>	.	PASS	AC=2,3;AF=0.0005298,0.0007947;AFR_AF=0.002,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=134438346;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	134450378	BI_GS_DEL1_B3_P3032_13	A	<CN0>	100	PASS	AC=4;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0.0013;END=134453504;EUR_AF=0.0052;MC=YL_CN_MSL_4102;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	134512154	DUP_gs.X_CNV_X_134512154_134566069	A	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=134566069;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	134519685	UW_VH_7009	C	<CN0>	100	PASS	AC=87;AF=0.102517;AFR_AF=0.1505;AMR_AF=0.1031;AN=2542;CIEND=0,311;CIPOS=-322,0;CS=DEL_union;EAS_AF=0.0877;END=134522284;EUR_AF=0.077;MC=BI_GS_DEL1_B2_P3032_225,YL_CN_GWD_5948;NS=2504;SAS_AF=0.078;SVTYPE=DEL	GT	.
X	134532108	UW_VH_6752	T	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,182;CIPOS=-199,0;CS=DEL_union;EAS_AF=0.0013;END=134535566;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	134641990	BI_GS_DEL1_B3_P3032_27	C	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-44,44;CIPOS=-44,44;CS=DEL_union;EAS_AF=0;END=134648586;EUR_AF=0.0052;MC=YL_CN_PJL_5108;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	134652695	DUP_gs.X_CNV_X_134652695_134790974	T	<CN0>,<CN2>	.	PASS	AC=0,5;AF=0,0.0013245;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=134790974;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	134748495	DUP_gs.X_CNV_X_134748495_134791065	G	<CN0>,<CN2>	.	PASS	AC=0,46;AF=0,0.0121854;AFR_AF=0,0.008;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0.0065;END=134791065;EUR_AF=0,0.0091;NS=2504;SAS_AF=0,0.0306;SVTYPE=DUP	GT	0
X	134756231	YL_CN_GBR_4588	A	<CN0>	100	PASS	AC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=134773985;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	134776925	ALU_umary_ALU_12797	A	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	134810690	DUP_gs.X_CNV_X_134810690_134828847	T	<CN0>,<CN2>	.	PASS	AC=0,39;AF=0,0.0103311;AFR_AF=0,0.012;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0.0092;END=134828847;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0.0195;SVTYPE=DUP	GT	0
X	134813415	DEL_pindel_54644	GGACAGAGGCAGAGAGAGCCAGGAGGAAATGGATGGGACCCGCGTTAGGAGAGGGT	G	.	PASS	AC=998;AF=0.264371;AFR_AF=0.2562;AMR_AF=0.271;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=134813470;EUR_AF=0.2572;NS=2504;SAS_AF=0.2925;SVTYPE=DEL	GT	1
X	134815179	DUP_gs.X_CNV_X_134815179_134851699	G	<CN0>,<CN2>	.	PASS	AC=0,39;AF=0,0.0103311;AFR_AF=0,0.011;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0.0092;END=134851699;EUR_AF=0,0.0026;MC=DUP_gs.X_CNV_X_134803341_134848744;NS=2504;SAS_AF=0,0.0209;SVTYPE=DUP	GT	0
X	134891974	DUP_gs.X_CNV_X_134891974_134910593	A	<CN0>,<CN2>	.	PASS	AC=0,22;AF=0,0.00582781;AFR_AF=0,0.007;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=134910593;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0125;SVTYPE=DUP	GT	0
X	134903435	DUP_gs.X_CNV_X_134903435_134948570	T	<CN0>,<CN2>	.	PASS	AC=0,20;AF=0,0.00529801;AFR_AF=0,0.007;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=134948570;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0111;SVTYPE=DUP	GT	0
X	134905005	DUP_gs.X_CNV_X_134905005_134916506	C	<CN0>,<CN2>	.	PASS	AC=0,22;AF=0,0.00582781;AFR_AF=0,0.007;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=134916506;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0.0111;SVTYPE=DUP	GT	0
X	134983163	BI_GS_DEL1_B3_P3032_38	G	<CN0>	100	PASS	AC=5;AF=0.0013245;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0;END=134993487;EUR_AF=0.0026;MC=YL_CN_GWD_5954;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	134994786	DUP_gs.X_CNV_X_134994786_135022311	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=135022311;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	135052293	BI_GS_DEL1_B3_P3033_3	G	<CN0>	100	PASS	AC=339;AF=0.300132;AFR_AF=0.2871;AMR_AF=0.2863;AN=2542;CIEND=-46,47;CIPOS=-46,47;CS=DEL_union;EAS_AF=0.2932;END=135052832;EUR_AF=0.3368;NS=2504;SAS_AF=0.2967;SVTYPE=DEL	GT	.
X	135105322	DEL_pindel_54647	GTATATATATATATATATATATATATATATATATATATATATATATATATA	G	.	PASS	AC=969;AF=0.256689;AFR_AF=0.2861;AMR_AF=0.25;AN=3775;CS=DEL_pindel;EAS_AF=0.2042;END=135105372;EUR_AF=0.2454;NS=2504;SAS_AF=0.2883;SVTYPE=DEL	GT	0
X	135115762	DEL_pindel_54648	ACCTTTCATCTTCCCTTTCCCCATCAGTGCTGTGGAAAAGGAAACCCACACAGACAGATT	A	.	PASS	AC=1238;AF=0.327947;AFR_AF=0.3101;AMR_AF=0.3263;AN=3775;CS=DEL_pindel;EAS_AF=0.3076;END=135115821;EUR_AF=0.3342;NS=2504;SAS_AF=0.3691;SVTYPE=DEL	GT	1
X	135152197	ALU_umary_ALU_12798	T	<INS:ME:ALU>	.	PASS	AC=14;AF=0.00370861;AFR_AF=0.014;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CAGTGCAGCACATATCT	GT	0
X	135157982	DEL_pindel_54650	CAAGAAAATAAAACAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=2474;AF=0.655364;AFR_AF=0.6471;AMR_AF=0.6565;AN=3775;CS=DEL_pindel;EAS_AF=0.6361;END=135158313;EUR_AF=0.6815;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6588;SVTYPE=DEL_ALU	GT	1
X	135217358	YL_CN_ACB_5155	T	<CN0>	100	PASS	AC=8;AF=0.0100662;AFR_AF=0.014;AMR_AF=0.0153;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0092;END=135220852;EUR_AF=0.0091;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	135299187	UW_VH_4107	A	<CN0>	100	PASS	AC=11;AF=0.00450331;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,222;CIPOS=-285,0;CS=DEL_union;EAS_AF=0.0013;END=135302198;EUR_AF=0.017;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	135326848	DEL_pindel_54654	TTCTTTCTCTTTTCGCTCCTTCAGCTTTCTCTGTCTTTCCTCCATCTGTTTTTCATATTGGAGCTTGGTCTTTCTTTCTTTTTCAAGTAGTTGTGTTTCTTTATTGGCTGAAATATTCCAAATAC	T	.	PASS	AC=129;AF=0.0341722;AFR_AF=0.009;AMR_AF=0.0477;AN=3775;CS=DEL_pindel;EAS_AF=0.0288;END=135326972;EUR_AF=0.0574;NS=2504;SAS_AF=0.0404;SVTYPE=DEL	GT	1
X	135555215	DEL_pindel_54658	GAATGAAGGGAGGAAGGGAGGGAGGAATGAAGGGAAGAAGGGGAGGAATGAAGGGAGGAAGGGAGGGAGGAATGAAGGGAAGAAGGGGAGA	G	.	PASS	AC=1141;AF=0.302252;AFR_AF=0.2951;AMR_AF=0.2996;AN=3775;CS=DEL_pindel;EAS_AF=0.2814;END=135555305;EUR_AF=0.2924;NS=2504;SAS_AF=0.3468;SVTYPE=DEL	GT	1
X	135563175	DEL_pindel_54659	TGATAGAATTTACTTCTATCTCACTTGTGACATGGATTCTAGTTTGTGCCTAGGTTGTGGCCCTTGCTAGGGTTCCAACATCGCAGGCAAGTCTGGTAATTTGGAGGAACAGTGGTAGGGAAGAGGGCCTCCGAAGA	T	.	PASS	AC=1199;AF=0.317616;AFR_AF=0.3161;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.305;END=135563311;EUR_AF=0.3042;NS=2504;SAS_AF=0.3565;SVTYPE=DEL	GT	1
X	135769569	L1_umary_LINE1_3139	C	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3333,5808,+;NS=2504;SAS_AF=0;SVLEN=2475;SVTYPE=LINE1;TSD=AAGAAGATACATTAAC	GT	0
X	135939455	YL_CN_STU_4677	A	<CN0>	100	PASS	AC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=135943733;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	135994495	BI_GS_DEL1_B2_P3033_496	A	<CN0>	100	PASS	AC=7;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-41,41;CIPOS=-41,41;CS=DEL_union;EAS_AF=0.0039;END=136001854;EUR_AF=0.0013;MC=YL_CN_KHV_5090;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	136013968	ALU_umary_ALU_12799	T	<INS:ME:ALU>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0.002;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYc1,10,279,-;NS=2504;SAS_AF=0;SVLEN=269;SVTYPE=ALU;TSD=null	GT	0
X	136025714	ALU_umary_ALU_12800	C	<INS:ME:ALU>	.	PASS	AC=71;AF=0.0188079;AFR_AF=0;AMR_AF=0.0115;AN=3775;CS=ALU_umary;EAS_AF=0.0288;EUR_AF=0.0235;MEINFO=AluYa5,1,270,-;NS=2504;SAS_AF=0.0348;SVLEN=269;SVTYPE=ALU;TSD=GGAAATGTCAGCTCTTTTC	GT	0
X	136185681	YL_CN_CHS_4790	G	<CN0>	100	PASS	AC=36;AF=0.0135099;AFR_AF=0.0329;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0131;END=136194340;EUR_AF=0.0052;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	136185841	BI_GS_DEL1_B3_P3034_4	G	<CN0>	100	PASS	AC=43;AF=0.0161589;AFR_AF=0.0429;AMR_AF=0.0019;AN=2542;CIEND=-37,37;CIPOS=-37,37;CS=DEL_union;EAS_AF=0.0131;END=136190378;EUR_AF=0.0052;MC=YL_CN_MSL_4109;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	136344615	YL_CN_BEB_3753	T	<CN0>	100	PASS	AC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=136349822;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	136349840	ALU_umary_ALU_12801	A	<INS:ME:ALU>	.	PASS	AC=2037;AF=0.539603;AFR_AF=0.2911;AMR_AF=0.7176;AN=3775;CS=ALU_umary;EAS_AF=0.5759;EUR_AF=0.7285;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.5167;SVLEN=280;SVTYPE=ALU;TSD=AAAAGCTCTGGTTGGTGGA	GT	0
X	136719323	BI_GS_DEL1_B5_P3034_641	T	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.006;AMR_AF=0;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.0013;END=136722865;EUR_AF=0.0039;MC=YL_CN_LWK_4290;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	136957297	ALU_umary_ALU_12802	T	<INS:ME:ALU>	.	PASS	AC=1400;AF=0.370861;AFR_AF=0.3599;AMR_AF=0.2691;AN=3775;CS=ALU_umary;EAS_AF=0.3953;EUR_AF=0.4191;MEINFO=AluUndef,16,281,-;NS=2504;SAS_AF=0.383;SVLEN=265;SVTYPE=ALU;TSD=GATGAAGTGTGATTT	GT	0
X	137172446	DEL_pindel_54667	GTCTATGACGAACCCACAATCAATATTATACTGAATGGGGAAAAGTTGAAAGAGTTCACC	G	.	PASS	AC=93;AF=0.0246358;AFR_AF=0.0329;AMR_AF=0.0172;AN=3775;CS=DEL_pindel;EAS_AF=0.0406;END=137172505;EUR_AF=0.0183;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	0
X	137234502	DEL_pindel_54668	ATATATATATGTATATATATGTATATATGTATATATACGTATATATATATGTATATATATGTATATATGTATATATACGTATATATATATG	A	.	PASS	AC=914;AF=0.242119;AFR_AF=0.2393;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2251;END=137234592;EUR_AF=0.2441;NS=2504;SAS_AF=0.2786;SVTYPE=DEL	GT	1
X	137241822	UW_VH_20012	A	<CN0>	100	PASS	AC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,83;CIPOS=-65,0;CS=DEL_union;EAS_AF=0;END=137248008;EUR_AF=0.0052;MC=YL_CN_CEU_5499;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	137271183	DEL_pindel_54669	CTTTTCCCAAATAAAGTCACATTCACGGGTTCCAGGGGTTGAGACATGGACATATATTTTTGGGGGCCAACATTCAACCCACAACAGGCAGTGATTTGACAGTTAAAACATTGATGGCTAAATGTCTAACTACATTTCATCTCTCAGATCCTATAGACACATGTTACAGTTAGTAGAGTTCAAACATAACGTTAATATCTGTTGATGATGCAAGAACTTAACTT	C	.	PASS	AC=2306;AF=0.610861;AFR_AF=0.5543;AMR_AF=0.5802;AN=3775;CS=DEL_pindel;EAS_AF=0.5733;END=137271406;EUR_AF=0.6775;NS=2504;SAS_AF=0.6811;SVTYPE=DEL	GT	1
X	137350678	DUP_gs.X_CNV_X_137350678_137377835	C	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=137377835;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	137711562	DEL_pindel_54672	ATTTAGAGTTGTAATCCCAATGTGTTGAGGGAGGGACCTGGTGGGAGGTGATTGGATCCTCGGGGCGGTTTCCCCATGCTGTCTCATATAGTGAGGAAGTTCTCACTAAATCTGTTTGATAAGTGGCGCTTTCCCATTCTCTCTCCTGCTGCCACGTGGAAAAGGTCCTTGCTTCCCCTTCATCTTCTGCCATGATGGTAAGTTTCCTGAGGCCTCCCCAGCCATGCAGAACTGTGAGTCAATTAAACCTCTTTCCTTTATAAATTACCCAGTCTCAGGTAGTATCTTTATAGCAGCGTGAGAATGAACTAATACCAGTGGTTCTCAAAGTCCCGAGGATCAACAGCCTCAGCATCACCTGGAAACTTGTTAGAAATGCCAAGT	A	.	PASS	AC=371;AF=0.0982781;AFR_AF=0.0578;AMR_AF=0.0897;AN=3775;CS=DEL_pindel;EAS_AF=0.1322;END=137711945;EUR_AF=0.1188;NS=2504;SAS_AF=0.1031;SVTYPE=DEL	GT	1
X	138122571	UW_VH_15787	A	<CN0>	100	PASS	AC=16;AF=0.00609272;AFR_AF=0.0169;AMR_AF=0.0019;AN=2542;CIEND=0,252;CIPOS=-243,0;CS=DEL_union;EAS_AF=0;END=138130736;EUR_AF=0.0065;MC=YL_CN_ESN_4509,EM_DL_DEL107205,BI_GS_DEL1_B3_P3036_3;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	138146418	DEL_pindel_54684	GCATAGAGCAGAGTTCTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCAGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGAC	G	.	PASS	AC=1612;AF=0.42702;AFR_AF=0.4786;AMR_AF=0.4179;AN=3775;CS=DEL_pindel;EAS_AF=0.3639;END=138146696;EUR_AF=0.376;MEINFO=AluY,68,281,-;NS=2504;SAS_AF=0.4833;SVTYPE=DEL_ALU	GT	1
X	138154195	YL_CN_PUR_5753	C	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=138205844;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	138157986	DEL_pindel_54685	GTGTATTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTT	G	.	PASS	AC=2332;AF=0.617748;AFR_AF=0.65;AMR_AF=0.6164;AN=3775;CS=DEL_pindel;EAS_AF=0.6204;END=138158176;EUR_AF=0.6136;MEINFO=AluY,128,281,-;NS=2504;SAS_AF=0.5752;SVTYPE=DEL_ALU	GT	1
X	138261197	BI_GS_DEL1_B2_P3036_157	G	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0.0013;END=138276559;EUR_AF=0.0065;MC=EM_DL_DEL107208,YL_CN_KHV_5093;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	138350817	DEL_pindel_54687	GTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAAGCATGTGCCACCACGCCTGGCTAATTTTTTATTTTTGGTAGAGATGAGGTTTCACCATGTTGGCCAGGCTGGTCT	G	.	PASS	AC=1146;AF=0.303576;AFR_AF=0.2891;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2997;END=138350939;EUR_AF=0.295;NS=2504;SAS_AF=0.3454;SVTYPE=DEL	GT	1
X	138384894	DEL_pindel_54691	TAGAATTCTAGGTGCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=2468;AF=0.653775;AFR_AF=0.7079;AMR_AF=0.6145;AN=3775;CS=DEL_pindel;EAS_AF=0.6374;END=138385220;EUR_AF=0.6554;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.6226;SVTYPE=DEL_ALU	GT	1
X	138420669	BI_GS_DEL1_B5_P3036_388	T	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0076;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=138435943;EUR_AF=0.0052;MC=YL_CN_MXL_3793;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	138438676	DEL_pindel_54693	AAAGAAACCTAAAACAAAATGAACAAGACAGGTCAAAACAAAAAAAAAAAAAAGGAAAAAGAAAGGATACAGAGTATTTG	A	.	PASS	AC=1093;AF=0.289536;AFR_AF=0.2682;AMR_AF=0.2882;AN=3775;CS=DEL_pindel;EAS_AF=0.284;END=138438755;EUR_AF=0.2781;NS=2504;SAS_AF=0.3384;SVTYPE=DEL	GT	1
X	138479906	ALU_umary_ALU_12803	A	<INS:ME:ALU>	.	PASS	AC=12;AF=0.00317881;AFR_AF=0.012;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	138500881	DUP_gs.X_CNV_X_138500881_138524083	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=138524083;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	138508519	UW_VH_11021	A	<CN0>	100	PASS	AC=14;AF=0.0317881;AFR_AF=0.0259;AMR_AF=0.0324;AN=2542;CIEND=0,215;CIPOS=-253,0;CS=DEL_union;EAS_AF=0.0275;END=138509925;EUR_AF=0.0444;MC=BI_GS_DEL1_B2_P3036_303;NS=2504;SAS_AF=0.0306;SVTYPE=DEL	GT	.
X	138744482	ALU_umary_ALU_12804	T	<INS:ME:ALU>	.	PASS	AC=85;AF=0.0225166;AFR_AF=0.0798;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=CCCCTATAAAGATTTT	GT	0
X	138792013	DUP_gs.X_CNV_X_138792013_138951270	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=138951270;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	138934761	DUP_gs.X_CNV_X_138934761_139013426	G	<CN0>,<CN2>	.	PASS	AC=0,3;AF=0,0.0007947;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=139013426;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	138941963	DEL_pindel_54700	TGAAAAGAAAGTGCTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1715;AF=0.454305;AFR_AF=0.6082;AMR_AF=0.4466;AN=3775;CS=DEL_pindel;EAS_AF=0.462;END=138942285;EUR_AF=0.329;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3705;SVTYPE=DEL_ALU	GT	1
X	139023159	DUP_gs.X_CNV_X_139023159_139062252	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=139062252;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	139045796	DEL_pindel_54703	GCATCACTCTACCTTACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGTATGGTGCTGGTACCAAAACAGATACATAGACCAAAGGAACAAAACAGAGGCCTCAGAAATGACACCACACATTTAAAGC	G	.	PASS	AC=1546;AF=0.409536;AFR_AF=0.4317;AMR_AF=0.3989;AN=3775;CS=DEL_pindel;EAS_AF=0.4542;END=139045929;EUR_AF=0.3512;NS=2504;SAS_AF=0.4011;SVTYPE=DEL	GT	1
X	139091026	BI_GS_DEL1_B5_P3037_55	A	<CN0>	100	PASS	AC=10;AF=0.0233113;AFR_AF=0.0229;AMR_AF=0.0248;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.017;END=139093375;EUR_AF=0.03;MC=EM_DL_DEL107218;NS=2504;SAS_AF=0.0223;SVTYPE=DEL	GT	.
X	139113319	DUP_gs.X_CNV_X_139113319_139125266	C	<CN0>,<CN2>	.	PASS	AC=0,7;AF=0,0.0018543;AFR_AF=0,0.006;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=139125266;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	139134371	EM_DL_DEL107219	G	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0013;END=139142432;EUR_AF=0.0052;MC=YL_CN_CHS_4791;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	139142107	BI_GS_DEL1_B4_P3037_18	T	<CN0>	100	PASS	AC=8;AF=0.0161589;AFR_AF=0.009;AMR_AF=0.0229;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0131;END=139144002;EUR_AF=0.0261;NS=2504;SAS_AF=0.0139;SVTYPE=DEL	GT	.
X	139494778	YL_CN_ITU_4764	T	<CN0>	100	PASS	AC=135;AF=0.0582782;AFR_AF=0.1296;AMR_AF=0.1126;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0065;END=139503081;EUR_AF=0.0222;MC=UW_VH_12965,BI_GS_DEL1_B4_P3037_55,YL_CN_FIN_4370;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	.
X	139494849	YL_CN_JPT_4780	A	<CN0>	100	PASS	AC=17;AF=0.00476821;AFR_AF=0.011;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=139512613;EUR_AF=0.0065;MC=BI_GS_DEL1_B5_P3037_345;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	139502739	BI_GS_DEL1_B3_P3037_14	A	<CN0>	100	PASS	AC=73;AF=0.110464;AFR_AF=0.1057;AMR_AF=0.1069;AN=2542;CIEND=-58,58;CIPOS=-58,58;CS=DEL_union;EAS_AF=0.1099;END=139503830;EUR_AF=0.1358;NS=2504;SAS_AF=0.0933;SVTYPE=DEL	GT	.
X	139502775	YL_CN_ACB_5159	G	<CN0>	100	PASS	AC=9;AF=0.00264901;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=139515871;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	139502853	DEL_pindel_54712	AGAAAGTCATTGGGGTTCAGCTTCCCTCTAAGCCCCTAACATGTTTGTTCTAGTTTATTTCTGGTGACTTCAGTGCTTTTAAAAAGCAATATATAAGCTATATCTAGCTTATATATTGCTTTTTAAAAGCACTGAAGTCACCAGAAATAAACTAGAACAAACATGTTAGGGGCTTAGAGGGAAGCTGAACCCTTTCAAAATTGATATGGTTGGAGTTGGTTGGGGAGATTGGAAATGTTGGT	A	.	PASS	AC=871;AF=0.230728;AFR_AF=0.1984;AMR_AF=0.2309;AN=3775;CS=DEL_pindel;EAS_AF=0.2539;END=139503094;EUR_AF=0.2324;NS=2504;SAS_AF=0.2493;SVTYPE=DEL	GT	1
X	139760537	EM_DL_DEL107227	C	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0026;END=139771719;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	139853445	ALU_umary_ALU_12805	A	<INS:ME:ALU>	.	PASS	AC=184;AF=0.0487417;AFR_AF=0.0927;AMR_AF=0.0649;AN=3775;CS=ALU_umary;EAS_AF=0.0615;EUR_AF=0.0091;MEINFO=AluYc1,36,281,+;NS=2504;SAS_AF=0.0042;SVLEN=245;SVTYPE=ALU;TSD=AAAAGACAAAAGCA	GT	0
X	140028196	BI_GS_DEL1_B4_P3038_3	C	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=140034012;EUR_AF=0.0052;MC=YL_CN_YRI_5659;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	140029452	DEL_pindel_54719	TATCTGGCAACTTTTATTCTCCATTAGATACCCATGGAAACTCTGGTGCTG	T	.	PASS	AC=360;AF=0.0953642;AFR_AF=0.0648;AMR_AF=0.1221;AN=3775;CS=DEL_pindel;EAS_AF=0.0982;END=140029502;EUR_AF=0.107;NS=2504;SAS_AF=0.1031;SVTYPE=DEL	GT	1
X	140039288	DUP_gs.X_CNV_X_140039288_140078780	A	<CN0>,<CN2>	.	PASS	AC=2,6;AF=0.0005298,0.0015894;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0065;END=140078780;EUR_AF=0.0026,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	140292652	DUP_gs.X_CNV_X_140292652_140335017	A	<CN0>,<CN2>	.	PASS	AC=1,2;AF=0.0002649,0.0005298;AFR_AF=0.001,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=140335017;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	140322707	UW_VH_11764	G	<CN0>	100	PASS	AC=12;AF=0.00397351;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=0,358;CIPOS=-82,0;CS=DEL_union;EAS_AF=0;END=140657766;EUR_AF=0.0091;MC=UW_VH_13631,UW_VH_24614,UW_VH_24611,UW_VH_10809,UW_VH_7943,UW_VH_25090;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	140334291	DUP_gs.X_CNV_X_140334291_140560547	A	<CN0>,<CN2>	.	PASS	AC=6,1;AF=0.0015894,0.0002649;AFR_AF=0.004,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=140560547;EUR_AF=0.0013,0;NS=2504;SAS_AF=0.0014,0.0014;SVTYPE=CNV	GT	0
X	140375697	DEL_pindel_54724	ACATCACAGTTTTTCCCAGGGGAGAAGGAGGGTGAAATAACAAGAGACTACTTAGGATAGTTAATTATAACAGGCACACAAGATTGGGGCAATCCTCGTCTCTACTTTATAAG	A	.	PASS	AC=1278;AF=0.338543;AFR_AF=0.3759;AMR_AF=0.3244;AN=3775;CS=DEL_pindel;EAS_AF=0.3128;END=140375809;EUR_AF=0.3055;NS=2504;SAS_AF=0.3593;SVTYPE=DEL	GT	1
X	140396601	ALU_umary_ALU_12806	G	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,36,281,-;NS=2504;SAS_AF=0;SVLEN=245;SVTYPE=ALU;TSD=null	GT	0
X	140476728	UW_VH_2342	A	<CN0>	100	PASS	AC=1006;AF=0.382781;AFR_AF=0.4506;AMR_AF=0.2863;AN=2542;CIEND=0,423;CIPOS=-391,0;CS=DEL_union;EAS_AF=0.3887;END=140479230;EUR_AF=0.3238;MC=BI_GS_DEL1_B2_P3038_127,YL_CN_ESN_4512,EM_DL_DEL107239;NS=2504;SAS_AF=0.415;SVTYPE=DEL	GT	.
X	140667978	DUP_gs.X_CNV_X_140667978_140774647	C	<CN0>,<CN2>	.	PASS	AC=8,6;AF=0.00211921,0.0015894;AFR_AF=0.004,0.001;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0.0026,0.0013;END=140774647;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0.0056;SVTYPE=CNV	GT	0
X	140671851	UW_VH_14239	A	<CN0>	100	PASS	AC=16;AF=0.00529801;AFR_AF=0.007;AMR_AF=0.0038;AN=2542;CIEND=0,25;CIPOS=-45,0;CS=DEL_union;EAS_AF=0.0039;END=140785735;EUR_AF=0.0091;MC=UW_VH_24620,UW_VH_24616,UW_VH_24618;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	140789921	DUP_gs.X_CNV_X_140789921_140855079	T	<CN0>,<CN2>	.	PASS	AC=3,3;AF=0.0007947,0.0007947;AFR_AF=0.002,0;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=140855079;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	140792712	YL_CN_PEL_4399	C	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=140835294;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	140792830	DUP_gs.X_CNV_X_140792830_140834797	C	<CN0>,<CN2>	.	PASS	AC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0.001;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=140834797;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	140887255	DEL_pindel_54730	GTGAGAATATGCGGTGTTTGGTTTTTTGTCCTTGTGATAGTTTGCTGAGAATAATGGTTACCAGCTTCATCCATGTCCCTACAAAGGACA	G	.	PASS	AC=445;AF=0.117881;AFR_AF=0.0828;AMR_AF=0.1412;AN=3775;CS=DEL_pindel;EAS_AF=0.1361;END=140887344;EUR_AF=0.1201;NS=2504;SAS_AF=0.1281;SVTYPE=DEL	GT	1
X	140957172	BI_GS_DEL1_B2_P3038_277	C	<CN0>	100	PASS	AC=24;AF=0.0598675;AFR_AF=0.0558;AMR_AF=0.0534;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.0602;END=140958534;EUR_AF=0.077;NS=2504;SAS_AF=0.0515;SVTYPE=DEL	GT	.
X	140957745	BI_GS_DEL1_B2_P3038_279	T	<CN0>	100	PASS	AC=22;AF=0.055894;AFR_AF=0.0548;AMR_AF=0.0534;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0628;END=140959430;EUR_AF=0.0666;NS=2504;SAS_AF=0.0404;SVTYPE=DEL	GT	.
X	141084211	UW_VH_12737	A	<CN0>	100	PASS	AC=7;AF=0.00953642;AFR_AF=0.007;AMR_AF=0.0172;AN=2542;CIEND=0,33;CIPOS=-31,0;CS=DEL_union;EAS_AF=0.0092;END=141086866;EUR_AF=0.017;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	141165498	DEL_pindel_54734	ATGCAGTGCCTGACAGGCAAAGGTGGCAGGTGCCTGTCGACAGGGATCTAGCTGTCAGTCTTTGTTTCCTCAGCGAAGCGCTGCATTCTGGAGTTCCCGAGTCTGTGTTCTTTCCTCTCCCCTGAACGTCCAGGAACCACAAGCAACTCCCCAGCTTCCTTCCTGAGGCCAGGTTGAGGCACTGCTGCTTGTGCCACAGTCAGCAAGTGACCAGGGAGCAGTGCTGGATGGCCTCTGCATGGGAGAATAACCTTGCCCGGCACTGGAATGCAGGGCTTGAATGAGCCACAGTGGAGCGCTTAAGTATAAAAAGAGAGGCAGGTGAGTCTCGGCAATCTGAGGCAGAAACTATCCCTAGAGAGGGAGTTAGTTGTCCAAGTCCCATGAGAGAAAAGTGACAATGTGCAGGTGATAGCATGGCAAGGTAACAGTGGGGAGGATAGAGGGAGGGCAGCAGTGTATTGGGG	A	.	PASS	AC=42;AF=0.0111258;AFR_AF=0.0169;AMR_AF=0.0038;AN=3775;CS=DEL_pindel;EAS_AF=0.017;END=141165964;EUR_AF=0.0052;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	0
X	141197840	L1_umary_LINE1_3141	T	<INS:ME:LINE1>	.	PASS	AC=12;AF=0.00317881;AFR_AF=0.011;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4767,6019,-;NS=2504;SAS_AF=0;SVLEN=1252;SVTYPE=LINE1;TSD=TTATTGCTGCTTGCTTATTTCT	GT	0
X	141204319	L1_umary_LINE1_3142	T	<INS:ME:LINE1>	.	PASS	AC=51;AF=0.0135099;AFR_AF=0.0499;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2075,6018,-;NS=2504;SAS_AF=0;SVLEN=3943;SVTYPE=LINE1;TSD=TTGGTCTTAGTTCT	GT	0
X	141232859	DEL_pindel_54737	GATGTAGCTAACCTAGAATAATGCCAGGGATCCAGCCATGCTCATCCTGATAGGACATAGAGTGATTTTAAGGCAGTGTCGGGTGTTTTATATATCTATATCTATATATAGATATAGAT	G	.	PASS	AC=445;AF=0.117881;AFR_AF=0.0748;AMR_AF=0.1279;AN=3775;CS=DEL_pindel;EAS_AF=0.1401;END=141232977;EUR_AF=0.1423;NS=2504;SAS_AF=0.1212;SVTYPE=DEL	GT	1
X	141385372	ALU_umary_ALU_12807	G	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluUndef,1,250,+;NS=2504;SAS_AF=0;SVLEN=249;SVTYPE=ALU;TSD=null	GT	0
X	141469740	L1_umary_LINE1_3143	A	<INS:ME:LINE1>	.	PASS	AC=7;AF=0.0018543;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0092;EUR_AF=0;MEINFO=LINE1,4591,6003,-;NS=2504;SAS_AF=0;SVLEN=1412;SVTYPE=LINE1;TSD=null	GT	0
X	141583593	ALU_umary_ALU_12808	T	<INS:ME:ALU>	.	PASS	AC=36;AF=0.00953642;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,259,-;NS=2504;SAS_AF=0.0501;SVLEN=256;SVTYPE=ALU;TSD=AT	GT	0
X	141843049	BI_GS_DEL1_B2_P3039_412	A	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0.0026;END=141860020;EUR_AF=0.0039;MC=YL_CN_CDX_3901;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	141854565	BI_GS_DEL1_B3_P3039_19	T	<CN0>	100	PASS	AC=22;AF=0.00635762;AFR_AF=0.016;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0052;END=141860145;EUR_AF=0.0052;MC=YL_CN_GWD_5964,EM_DL_DEL107251;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	141893474	BI_GS_DEL1_B3_P3039_20	T	<CN0>	100	PASS	AC=8;AF=0.00980132;AFR_AF=0.011;AMR_AF=0.0095;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0079;END=141895729;EUR_AF=0.0157;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	141924785	DEL_pindel_54746	TATATTCTTTTTTATAGGTGCATAGTAATTCAAATTATAGAAGTAACATACTTTTTTCAAACATAACACTGTTGATATGCATTGAGGATATTTCCAGGATATATGATTTTTTTTTTTGGTATTACAAAACC	T	.	PASS	AC=964;AF=0.255364;AFR_AF=0.2213;AMR_AF=0.25;AN=3775;CS=DEL_pindel;EAS_AF=0.2631;END=141924915;EUR_AF=0.2598;NS=2504;SAS_AF=0.2939;SVTYPE=DEL	GT	0
X	141980345	YL_CN_ITU_4770	T	<CN0>	100	PASS	AC=9;AF=0.00423841;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=141993319;EUR_AF=0.0065;MC=BI_GS_DEL1_B5_P3039_748;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	.
X	142004125	DEL_pindel_54748	CATATATATATATATATATATATATATATATATATATATATATATATATAT	C	.	PASS	AC=990;AF=0.262252;AFR_AF=0.2612;AMR_AF=0.2405;AN=3775;CS=DEL_pindel;EAS_AF=0.2343;END=142004175;EUR_AF=0.2559;NS=2504;SAS_AF=0.3162;SVTYPE=DEL	GT	1
X	142051221	DEL_pindel_54749	AGTCTATGTCTACATCGTTATATTCCTTCTCTTTTAGATCCCATTCACAGCCAAACAGGCTCC	A	.	PASS	AC=515;AF=0.136424;AFR_AF=0.0608;AMR_AF=0.1336;AN=3775;CS=DEL_pindel;EAS_AF=0.178;END=142051283;EUR_AF=0.1671;NS=2504;SAS_AF=0.1671;SVTYPE=DEL	GT	1
X	142197943	DEL_pindel_54750	CTAAAATCTTCTGCATATTTATGTTGTCACCTTCTGGGAAGAAGGAAAGAAACACACAAATACACACTCTAGTATTTTCTGAGATCTTACATATACCAGATGCTATACTAGACATGTTTG	C	.	PASS	AC=1466;AF=0.388344;AFR_AF=0.4357;AMR_AF=0.3416;AN=3775;CS=DEL_pindel;EAS_AF=0.3154;END=142198062;EUR_AF=0.3786;NS=2504;SAS_AF=0.4443;SVTYPE=DEL	GT	1
X	142297932	BI_GS_DEL1_B3_P3040_13	A	<CN0>	100	PASS	AC=6;AF=0.0119205;AFR_AF=0.016;AMR_AF=0.0057;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.0039;END=142302367;EUR_AF=0.0131;MC=YL_CN_MSL_4117;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	.
X	142342209	BI_GS_DEL1_B2_P3040_174	T	<CN0>	100	PASS	AC=116;AF=0.170861;AFR_AF=0.1834;AMR_AF=0.1469;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.1505;END=142343067;EUR_AF=0.1762;NS=2504;SAS_AF=0.1866;SVTYPE=DEL	GT	.
X	142369685	DUP_gs.X_CNV_X_142369685_142515399	T	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=142515399;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	142499147	ALU_umary_ALU_12809	C	<INS:ME:ALU>	.	PASS	AC=37;AF=0.00980132;AFR_AF=0.0359;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	142600307	UW_VH_14318	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,335;CIPOS=-118,0;CS=DEL_union;EAS_AF=0;END=142798883;EUR_AF=0.0065;MC=UW_VH_5404,UW_VH_5880,UW_VH_24127,EM_DL_DEL107261;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	142833364	DEL_pindel_54759	GTCAAAAACTACACTAGTGCTTTCAATCAATATACTGGAAGCGTCTAGAGAACATGTCAAAATACAATTTTATTTATATATATATATGTATATATATATATATATATATATATATATATACATA	G	.	PASS	AC=1170;AF=0.309934;AFR_AF=0.327;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2827;END=142833487;EUR_AF=0.2977;NS=2504;SAS_AF=0.3315;SVTYPE=DEL	GT	1
X	142885690	ALU_umary_ALU_12810	A	<INS:ME:ALU>	.	PASS	AC=9;AF=0.00238411;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0092;EUR_AF=0;MEINFO=AluUndef,16,281,+;NS=2504;SAS_AF=0.0028;SVLEN=265;SVTYPE=ALU;TSD=ATAAATATAAAAGTGTTATTAC	GT	0
X	142926126	ALU_umary_ALU_12811	T	<INS:ME:ALU>	.	PASS	AC=304;AF=0.0805298;AFR_AF=0.1974;AMR_AF=0.0573;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0.0822;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.0153;SVLEN=280;SVTYPE=ALU;TSD=TGCTCTTTTTTGTT	GT	0
X	142958569	ALU_umary_ALU_12812	C	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa3_1,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	143063721	DEL_pindel_54763	AAATTTCTCTCATAAATGCTGAGGAAGCCACCGAAAATTTCGTTTCTAAGTGTAGCTAATATGAGGATGAATCAGATTTCCAAGTAAGTCTCTGAAACATTCTCATGAAAAAGGGTTAAGTCTGTAGAAAGAGTCTGCAGCCCTGCACATAATGAAAAGTCCAATCCTGCACGTGC	A	.	PASS	AC=709;AF=0.187815;AFR_AF=0.1496;AMR_AF=0.1947;AN=3775;CS=DEL_pindel;EAS_AF=0.2068;END=143063896;EUR_AF=0.205;NS=2504;SAS_AF=0.1978;SVTYPE=DEL	GT	1
X	143329808	ALU_umary_ALU_12813	A	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	143420722	ALU_umary_ALU_12814	C	<INS:ME:ALU>	.	PASS	AC=92;AF=0.0243709;AFR_AF=0;AMR_AF=0.0115;AN=3775;CS=ALU_umary;EAS_AF=0.0301;EUR_AF=0.0183;MEINFO=AluYa5,2,281,+;NS=2504;SAS_AF=0.0682;SVLEN=279;SVTYPE=ALU;TSD=AAAACAATGAGGTC	GT	0
X	143628378	YL_CN_CHB_4749	C	<CN0>	100	PASS	AC=127;AF=0.0484768;AFR_AF=0.006;AMR_AF=0.1011;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0458;END=143637701;EUR_AF=0.0836;MC=BI_GS_DEL1_B5_P3041_305,UW_VH_2150,UW_VH_3798;NS=2504;SAS_AF=0.0348;SVTYPE=DEL	GT	.
X	143657026	UW_VH_15732	G	<CN0>	100	PASS	AC=6;AF=0.00635762;AFR_AF=0.005;AMR_AF=0.0057;AN=2542;CIEND=0,212;CIPOS=-202,0;CS=DEL_union;EAS_AF=0.0052;END=143659596;EUR_AF=0.0117;MC=YL_CN_GWD_5967,BI_GS_DEL1_B3_P3041_14;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	143704684	L1_umary_LINE1_3144	C	<INS:ME:LINE1>	.	PASS	AC=192;AF=0.0508609;AFR_AF=0.1765;AMR_AF=0.021;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0052;MEINFO=LINE1,193,6019,+;NS=2504;SAS_AF=0;SVLEN=5826;SVTYPE=LINE1;TSD=GAAAATCCTGCTTGCC	GT	0
X	143717905	YL_CN_PEL_4405	A	<CN0>	100	PASS	AC=6;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=143724245;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	143723351	ALU_umary_ALU_12815	G	<INS:ME:ALU>	.	PASS	AC=226;AF=0.0598675;AFR_AF=0.0518;AMR_AF=0.0725;AN=3775;CS=ALU_umary;EAS_AF=0.0275;EUR_AF=0.0509;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1058;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	143778329	DEL_pindel_54774	AATAAATAATTGTTTAAAGCCTATATATATATATATATATATATATATATATATATAT	A	.	PASS	AC=830;AF=0.219868;AFR_AF=0.2263;AMR_AF=0.2634;AN=3775;CS=DEL_pindel;EAS_AF=0.2094;END=143778386;EUR_AF=0.1841;NS=2504;SAS_AF=0.2284;SVTYPE=DEL	GT	0
X	143843274	DEL_pindel_54776	CAAAAAGAGATTTGTTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	C	.	PASS	AC=1457;AF=0.38596;AFR_AF=0.4267;AMR_AF=0.3435;AN=3775;CS=DEL_pindel;EAS_AF=0.3717;END=143843581;EUR_AF=0.3238;MEINFO=AluYb6_2,13,281,+;NS=2504;SAS_AF=0.4415;SVTYPE=DEL_ALU	GT	1
X	144060275	ALU_umary_ALU_12816	T	<INS:ME:ALU>	.	PASS	AC=27;AF=0.00715232;AFR_AF=0.0259;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null	GT	0
X	144130240	ALU_umary_ALU_12817	G	<INS:ME:ALU>	.	PASS	AC=5;AF=0.0013245;AFR_AF=0.004;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	144180262	BI_GS_DEL1_B2_P3042_91	A	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-25,25;CIPOS=-25,25;CS=DEL_union;EAS_AF=0;END=144190713;EUR_AF=0.0052;MC=YL_CN_PEL_4406;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	144217923	YL_CN_MSL_4118	C	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=144309451;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	144299026	UW_VH_17084	C	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,201;CIPOS=-190,0;CS=DEL_union;EAS_AF=0;END=144353484;EUR_AF=0.0052;MC=BI_GS_DEL1_B3_P3042_11,YL_CN_MSL_4119;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	144322610	UW_VH_6547	A	<CN0>	100	PASS	AC=210;AF=0.237351;AFR_AF=0.2971;AMR_AF=0.2214;AN=2542;CIEND=0,339;CIPOS=-264,0;CS=DEL_union;EAS_AF=0.2186;END=144323238;EUR_AF=0.2219;MC=BI_GS_DEL1_B5_P3042_261;NS=2504;SAS_AF=0.2019;SVTYPE=DEL	GT	.
X	144326342	YL_CN_TSI_4483	C	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=144482243;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	144365176	DUP_gs.X_CNV_X_144365176_144397521	T	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=144397521;EUR_AF=0.0013,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	144422074	BI_GS_DEL1_B1_P3042_253	G	<CN0>	100	PASS	AC=2139;AF=0.836821;AFR_AF=0.7298;AMR_AF=0.9027;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8469;END=144424508;EUR_AF=0.893;MC=EM_DL_DEL107278,YL_CN_MSL_4120;NS=2504;SAS_AF=0.8677;SVTYPE=DEL	GT	.
X	144443230	ALU_umary_ALU_12818	T	<INS:ME:ALU>	.	PASS	AC=62;AF=0.0164238;AFR_AF=0.0558;AMR_AF=0.0115;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,7,281,-;NS=2504;SAS_AF=0;SVLEN=274;SVTYPE=ALU;TSD=TCAATGACTTTT	GT	0
X	144454642	DEL_pindel_54787	TCATAAAATTAAATCAATGTCTACCATTTCTGTCATCTATTCTATTCATGATAATGTAAACTAAATGTTAGTGAGTTCATCACAGTTGTCATGTAATGTACAATCATTTGTTGAATTTTCCCTGGCCTGTAAAATCACTGGATAGGGGCTCCCTGTAAAACTAAGGCTAGGACCTTTGCAAACAAAA	T	.	PASS	AC=218;AF=0.0577483;AFR_AF=0.0389;AMR_AF=0.0534;AN=3775;CS=DEL_pindel;EAS_AF=0.0942;END=144454828;EUR_AF=0.0509;NS=2504;SAS_AF=0.0557;SVTYPE=DEL	GT	0
X	144887118	BI_GS_DEL1_B3_P3042_33	T	<CN0>	100	PASS	AC=307;AF=0.279205;AFR_AF=0.3071;AMR_AF=0.25;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.2317;END=144887538;EUR_AF=0.3094;NS=2504;SAS_AF=0.2799;SVTYPE=DEL	GT	.
X	145052104	BI_GS_DEL1_B2_P3043_25	G	<CN0>	100	PASS	AC=41;AF=0.0193377;AFR_AF=0.0499;AMR_AF=0.0115;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0079;END=145055137;EUR_AF=0.0144;MC=YL_CN_YRI_5665,UW_VH_8229,YL_CN_GWD_5969;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	145090496	UW_VH_23119	A	<CN0>	100	PASS	AC=17;AF=0.0442384;AFR_AF=0.0429;AMR_AF=0.0382;AN=2542;CIEND=0,124;CIPOS=-110,0;CS=DEL_union;EAS_AF=0.0445;END=145091939;EUR_AF=0.0509;NS=2504;SAS_AF=0.0432;SVTYPE=DEL	GT	.
X	145116600	DEL_pindel_54796	AATATGTGTTATCAAACACATATTAATGTATATGTGTTATCAAACACATATTAATGTATATGTGTTATCAAACACATATTAATGT	A	.	PASS	AC=1131;AF=0.299603;AFR_AF=0.2871;AMR_AF=0.3015;AN=3775;CS=DEL_pindel;EAS_AF=0.2945;END=145116684;EUR_AF=0.2898;NS=2504;SAS_AF=0.3315;SVTYPE=DEL	GT	1
X	145124596	BI_GS_DEL1_B3_P3043_10	A	<CN0>	100	PASS	AC=10;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-30,31;CIPOS=-30,31;CS=DEL_union;EAS_AF=0;END=145135079;EUR_AF=0.0065;MC=YL_CN_ESN_4518,UW_VH_13809;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	145221989	BI_GS_DEL1_B1_P3043_147	G	<CN0>	100	PASS	AC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0;END=145237539;EUR_AF=0.0091;MC=YL_CN_GBR_4595;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	145237921	L1_umary_LINE1_3145	A	<INS:ME:LINE1>	.	PASS	AC=7;AF=0.0018543;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0092;EUR_AF=0;MEINFO=LINE1,5173,5998,+;NS=2504;SAS_AF=0;SVLEN=825;SVTYPE=LINE1;TSD=null	GT	0
X	145399382	UW_VH_5377	C	<CN0>	100	PASS	AC=21;AF=0.0437086;AFR_AF=0.0518;AMR_AF=0.0439;AN=2542;CIEND=0,236;CIPOS=-333,0;CS=DEL_union;EAS_AF=0.0366;END=145401050;EUR_AF=0.0535;MC=BI_GS_DEL1_B2_P3043_201,YL_CN_CEU_5509;NS=2504;SAS_AF=0.0292;SVTYPE=DEL	GT	.
X	145404316	BI_GS_DEL1_B4_P3043_69	C	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0;END=145422276;EUR_AF=0.0052;MC=YL_CN_STU_4688;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	145509550	DEL_pindel_54808	TCCATGTGCCACTTTGCTCTGTGACCTCATATCCTACGACTTTCCTACCTAGTTTCATGGAATCTTGCCATATTATTCTCTTTTGTTGTTACTTACAGACAATAGGCATGTTATTGCCTTGTGGCTCTTGCTTGCATTAGCTGTTCTCTTATTTTGGAATGTTCTTCCTTTAGATATCTACATGGTTCATTTATTCACTTCCTTTACATATTTACTTAAATGTCAGTGAGACCTTCTCGAGCTACCTCATCTAAAATGGCAACTCCCACACCACCCTTCTTCTCCCTGGTATATTTTTCTCCATAGCCTTTTGCACCATCATCTAACGTCCTCTATATTCAACTTATATTGCCACTATGTGTCTCCTCTGCTACCATTTAAGCTCCAGGAGAGTAAGGATTATTGTTTATTTGTTTATTACTTTATCTCTAAGGTCTAGAAGAGCATCCGGTGTATAGTAAGCACATAATGAATATTTATATTAGTTAGGATCTAGATTTGGTTGCTAGAATAGAGACCCAAAGTTAAGAGTGGCTTAAACAAGATTAAAGTGTTTTTTTTTTCTCACATAACAGGCTTGATGTGAAAAATTAATGGCTGCTGTAAGTGATACACAGGGTCAGAGACTCAGATTCCTTCTCTCTTATTATCCTCCTGTTTTTAATGTACTGAATCAGACAGCATGGTCCAACATGGCTCACCACTTCACTAAGTCTTTATTCCGGTGTGAAGCAAAGGGAAAAGAAGGAGGAGGTGACCCTTCCACTCACATCCCATTGTCCATATCTTTATCACACTGTCACACATTGTCTGAAAGGAGGATGAGGCGTAGAGCCTTTATTTCTGGGGATCCCTATG	T	.	PASS	AC=83;AF=0.0219868;AFR_AF=0.0179;AMR_AF=0.0134;AN=3775;CS=DEL_pindel;EAS_AF=0.0275;END=145510407;EUR_AF=0.0287;NS=2504;SAS_AF=0.0209;SVTYPE=DEL	GT	0
X	145526507	DEL_pindel_54809	TAAGAAAATTTCAGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCATGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=1089;AF=0.288477;AFR_AF=0.2762;AMR_AF=0.271;AN=3775;CS=DEL_pindel;EAS_AF=0.288;END=145526819;EUR_AF=0.2794;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.3287;SVTYPE=DEL_ALU	GT	1
X	145539119	ALU_umary_ALU_12819	C	<INS:ME:ALU>	.	PASS	AC=229;AF=0.0606623;AFR_AF=0.0738;AMR_AF=0.0401;AN=3775;CS=ALU_umary;EAS_AF=0.0772;EUR_AF=0.0744;MEINFO=AluYa5,1,277,+;NS=2504;SAS_AF=0.0251;SVLEN=276;SVTYPE=ALU;TSD=AAAACTTCACCTATC	GT	0
X	145727200	DEL_pindel_54812	TATATATATACATATATATATATATATATATACATATATATATATATATACATATATATATATATATGTATATATATATATATATATAG	T	.	PASS	AC=773;AF=0.204768;AFR_AF=0.2024;AMR_AF=0.2137;AN=3775;CS=DEL_pindel;EAS_AF=0.1872;END=145727288;EUR_AF=0.2102;NS=2504;SAS_AF=0.2145;SVTYPE=DEL	GT	0
X	145758649	ALU_umary_ALU_12820	C	<INS:ME:ALU>	.	PASS	AC=13;AF=0.00344371;AFR_AF=0.013;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,2,279,+;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null	GT	0
X	145882153	DUP_gs.X_CNV_X_145882153_145967775	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=145967775;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	146038209	BI_GS_DEL1_B4_P3044_5	A	<CN0>	100	PASS	AC=147;AF=0.0566887;AFR_AF=0.1934;AMR_AF=0.0191;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0013;END=146041733;EUR_AF=0.0117;MC=EM_DL_DEL107288,UW_VH_8700,YL_CN_LWK_4301,UW_VH_13092,YL_CN_MSL_4121;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	146119815	DUP_gs.X_CNV_X_146119815_146131909	T	<CN0>,<CN2>	.	PASS	AC=2,12;AF=0.0005298,0.00317881;AFR_AF=0.002,0.012;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=146131909;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	146169503	DEL_pindel_54819	CCCCAGCCCTGGGTGGATCCAGAAGTGCAGTCTGGGAGTCAGGACCTAGAGTCAAAAACTTTAGAAGCGGCACCCAAACCACAGGATGCAGTCCTTCCCACTCTTCCATCTCCTTTCCAAACGCAGAGGAGCCTCACCCCATAGTCACTGCCAACCCCAGCCACAAGGAGTACTGCCAGATTACCACTGATGTTCCTATAAGGCCCGAGGTCTCTTATGTCAGCTTGTGGTGAATG	C	.	PASS	AC=1232;AF=0.326358;AFR_AF=0.3081;AMR_AF=0.3683;AN=3775;CS=DEL_pindel;EAS_AF=0.3168;END=146169738;EUR_AF=0.3068;NS=2504;SAS_AF=0.3524;SVTYPE=DEL	GT	1
X	146179855	BI_GS_DEL1_B2_P3044_81	A	<CN0>	100	PASS	AC=29;AF=0.0111258;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0;END=146185929;EUR_AF=0.0104;MC=EM_DL_DEL107289,YL_CN_CEU_5510,UW_VH_3669;NS=2504;SAS_AF=0.0418;SVTYPE=DEL	GT	.
X	146253811	BI_GS_DEL1_B2_P3044_118	A	<CN0>	100	PASS	AC=113;AF=0.153113;AFR_AF=0.1565;AMR_AF=0.166;AN=2542;CIEND=-33,33;CIPOS=-33,33;CS=DEL_union;EAS_AF=0.1584;END=146254811;EUR_AF=0.1488;NS=2504;SAS_AF=0.1379;SVTYPE=DEL	GT	.
X	146340753	BI_GS_DEL1_B5_P3044_236	A	<CN0>	100	PASS	AC=8;AF=0.00264901;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-11,11;CIPOS=-11,11;CS=DEL_union;EAS_AF=0;END=146346040;EUR_AF=0.0039;MC=YL_CN_ASW_4640;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	146374337	BI_GS_DEL1_B3_P3044_16	A	<CN0>	100	PASS	AC=11;AF=0.00370861;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0;END=146381726;EUR_AF=0.0039;NS=2504;SAS_AF=0.0125;SVTYPE=DEL	GT	.
X	146374388	BI_GS_DEL1_B3_P3044_15	T	<CN0>	100	PASS	AC=14;AF=0.00715232;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-48,49;CIPOS=-48,49;CS=DEL_union;EAS_AF=0.0026;END=146378041;EUR_AF=0.0065;NS=2504;SAS_AF=0.0209;SVTYPE=DEL	GT	.
X	146425255	UW_VH_15746	C	<CN0>	100	PASS	AC=36;AF=0.0545695;AFR_AF=0.0708;AMR_AF=0.0458;AN=2542;CIEND=0,130;CIPOS=-252,0;CS=DEL_union;EAS_AF=0.0602;END=146426939;EUR_AF=0.0457;MC=BI_GS_DEL1_B3_P3044_21;NS=2504;SAS_AF=0.0418;SVTYPE=DEL	GT	.
X	146430505	DEL_pindel_54826	TTATATATATAATATATATATATATATATATATATATATATATATATATATATATATA	T	.	PASS	AC=869;AF=0.230199;AFR_AF=0.2164;AMR_AF=0.2481;AN=3775;CS=DEL_pindel;EAS_AF=0.195;END=146430562;EUR_AF=0.2728;NS=2504;SAS_AF=0.2284;SVTYPE=DEL	GT	0
X	146459618	L1_umary_LINE1_3146	G	<INS:ME:LINE1>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=LINE1,527,5981,-;NS=2504;SAS_AF=0;SVLEN=5454;SVTYPE=LINE1;TSD=null	GT	0
X	146559239	DEL_pindel_54828	TAAGAAGCTAAACAACACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAA	T	.	PASS	AC=2440;AF=0.646358;AFR_AF=0.5932;AMR_AF=0.6718;AN=3775;CS=DEL_pindel;EAS_AF=0.6911;END=146559345;EUR_AF=0.6606;MEINFO=LINE1,5958,5973,+;NS=2504;SAS_AF=0.6393;SVTYPE=DEL_LINE1	GT	1
X	146570325	YL_CN_PUR_5763	A	<CN0>	100	PASS	AC=26;AF=0.0701987;AFR_AF=0.0518;AMR_AF=0.0802;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0864;END=146572510;EUR_AF=0.0809;MC=BI_GS_DEL1_B1_P3044_308;NS=2504;SAS_AF=0.0599;SVTYPE=DEL	GT	.
X	146683080	DEL_pindel_54831	CTGCCAGTAATTTATAACTATTTTCTCATCTTTACAGATGAGGACAGTGAGGCTCAAATATTATTTCAAGTCCAAGGATGTAGCGTTTACACATGTATCAAATTATCACACTGTACACTTTGAATATATACAATCTTTGTCAATTAAATATTTTTAAGTAACAATAAATAAAAAAACTCCAAAGCAAATCTGGATAAGACTTAAGTGATAAAAGGATGAAAAAAATAGCCTTCCAGACTGGGTACAAAATATTGTGGTAGGTTACACTTCGGAAGATAAACTGTGAAAAGAAAATACATTCTTATCTCAAGGAATAGTTGAACTATTCAACTAGAGAAAGCTAATGAAGTTAGAGCTAGACATGAAAAAGAGAATGCCAGAGGCCCCTTTTTTTTTTTTTTTTTTTTTTTTTAAGGAATGAACATCCTTTGAAACAAAAAAGATGAACGTTAGTT	C	.	PASS	AC=1161;AF=0.30755;AFR_AF=0.2891;AMR_AF=0.3149;AN=3775;CS=DEL_pindel;EAS_AF=0.3076;END=146683534;EUR_AF=0.2872;NS=2504;SAS_AF=0.3496;SVTYPE=DEL	GT	1
X	146756968	DEL_pindel_54833	GAGTTTGGGGGCCTCAGAAGACAGGAAGATGAAGGAAAGTTTGAAACTTCTTACAGACTGGTTA	G	.	PASS	AC=1090;AF=0.288742;AFR_AF=0.2792;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2814;END=146757031;EUR_AF=0.2781;NS=2504;SAS_AF=0.3189;SVTYPE=DEL	GT	0
X	146782399	BI_GS_DEL1_B4_P3044_100	T	<CN0>	100	PASS	AC=13;AF=0.0309934;AFR_AF=0.0239;AMR_AF=0.0401;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0.0288;END=146783836;EUR_AF=0.0431;NS=2504;SAS_AF=0.0237;SVTYPE=DEL	GT	.
X	146843691	BI_GS_DEL1_B4_P3044_113	T	<CN0>	100	PASS	AC=37;AF=0.0137748;AFR_AF=0.0459;AMR_AF=0.0019;AN=2542;CIEND=-33,33;CIPOS=-33,33;CS=DEL_union;EAS_AF=0;END=146849792;EUR_AF=0.0065;MC=UW_VH_12219,YL_CN_ESN_4521;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	146849495	DEL_pindel_54838	AGTCTCACGAAATCTGATGGTTTTATAGGCGTCCGGCATTTCCCTTGCTTGAGCTCGCTCTGCCCAGCTGCCCTGTGAAGAAGGTGCCTGCTTCTCCTTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCTTCGTCAGCAATGCGGAACTGTGAGTCAATTAAACCTCTTTCCTTTATAAATTACCCAGTCTCGGGTATTTCTTTATAGCAGAGTGAGAATGGACTAATACAAAGGTTTTGTGTGAATATACGTTTCGTTTTCATCCCTCTGGGATAATTACTCAAGAGTGCAAATTTTGGGTTGTATGGTAGTT	A	.	PASS	AC=1246;AF=0.330066;AFR_AF=0.338;AMR_AF=0.3206;AN=3775;CS=DEL_pindel;EAS_AF=0.3181;END=146849811;EUR_AF=0.3094;NS=2504;SAS_AF=0.3607;SVTYPE=DEL	GT	1
X	146849941	DEL_pindel_54839	CATTGCAGCCATTCTGATAAGTACGTGGTGTTATCTCATAGTGGTTTTAATGTGCACTTTCTTAATGGCTAATAATTTTTT	C	.	PASS	AC=1209;AF=0.320265;AFR_AF=0.3001;AMR_AF=0.3111;AN=3775;CS=DEL_pindel;EAS_AF=0.301;END=146850021;EUR_AF=0.3107;NS=2504;SAS_AF=0.3858;SVTYPE=DEL	GT	1
X	146851055	ALU_umary_ALU_12821	T	<INS:ME:ALU>	.	PASS	AC=9;AF=0.00238411;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0104;MEINFO=AluUndef,5,278,-;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=AATGGTATTGTTTTT	GT	0
X	146983498	BI_GS_DEL1_B3_P3044_46	A	<CN0>	100	PASS	AC=45;AF=0.0754967;AFR_AF=0.0808;AMR_AF=0.0725;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.0746;END=146985520;EUR_AF=0.0561;MC=YL_CN_PJL_5130;NS=2504;SAS_AF=0.0919;SVTYPE=DEL	GT	.
X	147037833	ALU_umary_ALU_12822	T	<INS:ME:ALU>	.	PASS	AC=5;AF=0.0013245;AFR_AF=0.005;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	147192263	BI_GS_DEL1_B4_P3045_29	G	<CN0>	100	PASS	AC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-29,29;CIPOS=-29,29;CS=DEL_union;EAS_AF=0;END=147203418;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	147194081	ALU_umary_ALU_12823	A	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0042;SVLEN=280;SVTYPE=ALU;TSD=AAATATTAACTTGTA	GT	0
X	147434332	DEL_pindel_54844	GCTAGGAAAGGGAATTCCCTGACCCCTTGCACTTCCCGGGTGAGGCGATGCCTCGCCCTGCTTTGGCTCATGCT	G	.	PASS	AC=432;AF=0.114437;AFR_AF=0.0877;AMR_AF=0.1527;AN=3775;CS=DEL_pindel;EAS_AF=0.1545;END=147434405;EUR_AF=0.107;NS=2504;SAS_AF=0.0891;SVTYPE=DEL	GT	1
X	147494550	ALU_umary_ALU_12824	A	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,28,281,+;NS=2504;SAS_AF=0.0014;SVLEN=253;SVTYPE=ALU;TSD=null	GT	0
X	147509695	BI_GS_DEL1_B1_P3045_318	T	<CN0>	100	PASS	AC=1623;AF=0.635762;AFR_AF=0.5095;AMR_AF=0.792;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8521;END=147511237;EUR_AF=0.6371;MC=YL_CN_CDX_3906,YL_CN_PEL_4410,YL_CN_IBS_4166,YL_CN_CHB_4751,YL_CN_ASW_4642,EM_DL_DEL101194266,YL_CN_YRI_5668,UW_VH_1323,YL_CN_GIH_3507,YL_CN_KHV_5104,YL_CN_PUR_5764,YL_CN_TSI_4486,YL_CN_FIN_4377,YL_CN_ESN_4522;NS=2504;SAS_AF=0.4666;SVTYPE=DEL	GT	.
X	147948687	BI_GS_DEL1_B3_P3045_27	T	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-27,27;CIPOS=-27,27;CS=DEL_union;EAS_AF=0;END=147955501;EUR_AF=0.0039;MC=YL_CN_ESN_4523;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	148287176	DUP_gs.X_CNV_X_148287176_148374732	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=148374732;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	148303489	DEL_pindel_54863	TACCTGGAGGTCTGAAAACTCCTCTGGGGCTTATGAATTCCTGGGTTCAGGCAAAGGCCTTGCCACTATAAATCTGGCTTACAAGCTCTCCAAGCTC	T	.	PASS	AC=66;AF=0.0174834;AFR_AF=0.006;AMR_AF=0.0191;AN=3775;CS=DEL_pindel;EAS_AF=0.0223;END=148303585;EUR_AF=0.03;NS=2504;SAS_AF=0.0139;SVTYPE=DEL	GT	0
X	148539115	ALU_umary_ALU_12825	C	<INS:ME:ALU>	.	PASS	AC=233;AF=0.0617219;AFR_AF=0.2144;AMR_AF=0.0191;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0091;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0014;SVLEN=280;SVTYPE=ALU;TSD=AGAACTCTC	GT	0
X	148579845	DUP_gs.X_CNV_X_148579845_148630997	A	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=148630997;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	148640196	DUP_gs.X_CNV_X_148640196_148654619	T	<CN0>,<CN2>	.	PASS	AC=76,3;AF=0.0201325,0.0007947;AFR_AF=0.0628,0;AMR_AF=0.0057,0;AN=3775;CS=DUP_gs;EAS_AF=0.0065,0.0026;END=148654619;EUR_AF=0.0026,0.0013;NS=2504;SAS_AF=0.0042,0;SVTYPE=CNV	GT	0
X	148685833	DUP_gs.X_CNV_X_148685833_148739727	T	<CN0>,<CN2>	.	PASS	AC=1,3;AF=0.0002649,0.0007947;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=148739727;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV	GT	0
X	148762813	DUP_gs.X_CNV_X_148762813_148775448	G	<CN0>,<CN2>	.	PASS	AC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=148775448;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	148771685	DUP_gs.X_CNV_X_148771685_148811274	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=148811274;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	148803850	BI_GS_DEL1_B5_P3046_644	C	<CN0>	100	PASS	AC=47;AF=0.04;AFR_AF=0.0897;AMR_AF=0.0248;AN=2542;CIEND=-16,17;CIPOS=-16,17;CS=DEL_union;EAS_AF=0.0144;END=148831837;EUR_AF=0.0379;NS=2504;SAS_AF=0.0111;SVTYPE=DEL	GT	.
X	148831648	YL_CN_MSL_4127	T	<CN0>	100	PASS	AC=29;AF=0.0108609;AFR_AF=0.0289;AMR_AF=0.0115;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=148836056;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	148848506	DUP_gs.X_CNV_X_148848506_148902086	T	<CN0>,<CN2>	.	PASS	AC=1,80;AF=0.0002649,0.021192;AFR_AF=0,0.0658;AMR_AF=0,0.0057;AN=3775;CS=DUP_gs;EAS_AF=0,0.0079;END=148902086;EUR_AF=0.0013,0.0026;NS=2504;SAS_AF=0,0.0042;SVTYPE=CNV	GT	0
X	148957595	DUP_gs.X_CNV_X_148957595_148998958	A	<CN0>,<CN2>	.	PASS	AC=4,81;AF=0.0010596,0.0214569;AFR_AF=0,0.0658;AMR_AF=0,0.0057;AN=3775;CS=DUP_gs;EAS_AF=0.0039,0.0092;END=148998958;EUR_AF=0.0013,0.0026;NS=2504;SAS_AF=0,0.0042;SVTYPE=CNV	GT	0
X	149006503	DEL_pindel_54866	CCAATGGCTGCCCTTAGTGACTTTCTTTTATAAAGCACAATACAGAAAGGGGGGAATGTAATAACCTTG	C	.	PASS	AC=1310;AF=0.34702;AFR_AF=0.3998;AMR_AF=0.3187;AN=3775;CS=DEL_pindel;EAS_AF=0.3207;END=149006571;EUR_AF=0.3107;NS=2504;SAS_AF=0.3607;SVTYPE=DEL	GT	1
X	149084379	DEL_pindel_54867	TTGGATTGAGGAAGATCACTTTTGAGACCCCATCCTAAGAAAAATAATTCAAGACGAGCACTAAATGAAATTGATCACTACAATGTTAAATATAATTGTGAAAAATGGGATGATCTAAATGTCTAATGAGAAGAAAACTGATATGTGAATATACTAGAATGGTCTATTCAATATGGAAAATACATCATTGTACTAAGTGAAAGAAGCTTAATGCAAAGTTGACTTCATGCTCTGGTTATAAGTGTGTACTATACCCATTATTATCTTTGTTTTGCAAATTCTTCATCCG	T	.	PASS	AC=49;AF=0.0129801;AFR_AF=0.002;AMR_AF=0.0286;AN=3775;CS=DEL_pindel;EAS_AF=0.0118;END=149084667;EUR_AF=0.0157;NS=2504;SAS_AF=0.0153;SVTYPE=DEL	GT	0
X	149236087	BI_GS_DEL1_B3_P3047_10	T	<CN0>	100	PASS	AC=62;AF=0.0672848;AFR_AF=0.1077;AMR_AF=0.0668;AN=2542;CIEND=-59,59;CIPOS=-59,59;CS=DEL_union;EAS_AF=0.034;END=149239411;EUR_AF=0.0509;NS=2504;SAS_AF=0.0641;SVTYPE=DEL	GT	.
X	149240944	DUP_gs.X_CNV_X_149240944_149265118	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=149265118;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	149379029	L1_umary_LINE1_3147	G	<INS:ME:LINE1>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3,5936,+;NS=2504;SAS_AF=0;SVLEN=5933;SVTYPE=LINE1;TSD=null	GT	0
X	149451325	ALU_umary_ALU_12826	G	<INS:ME:ALU>	.	PASS	AC=941;AF=0.249272;AFR_AF=0.2891;AMR_AF=0.2882;AN=3775;CS=ALU_umary;EAS_AF=0.1859;EUR_AF=0.2023;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.2827;SVLEN=280;SVTYPE=ALU;TSD=AACAAGATAGCGAGAGGTTG	GT	0
X	149494721	ALU_umary_ALU_12827	G	<INS:ME:ALU>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluY,28,246,+;NS=2504;SAS_AF=0.0014;SVLEN=218;SVTYPE=ALU;TSD=null	GT	0
X	149549314	DEL_pindel_54872	TTACAAATGTTCATCTTGCTCCAGTGATTTGAAAAGTCACCATTATTATATATTC	T	.	PASS	AC=1081;AF=0.286358;AFR_AF=0.2702;AMR_AF=0.2805;AN=3775;CS=DEL_pindel;EAS_AF=0.2866;END=149549368;EUR_AF=0.2715;NS=2504;SAS_AF=0.3287;SVTYPE=DEL	GT	1
X	149551136	DEL_pindel_54873	TTGTCCCATTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTCTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	T	.	PASS	AC=2120;AF=0.561589;AFR_AF=0.6381;AMR_AF=0.4981;AN=3775;CS=DEL_pindel;EAS_AF=0.5196;END=149551472;EUR_AF=0.577;MEINFO=AluY,1,281,-;NS=2504;SAS_AF=0.5292;SVTYPE=DEL_ALU	GT	0
X	149927786	BI_GS_DEL1_B3_P3047_32	G	<CN0>	100	PASS	AC=128;AF=0.12;AFR_AF=0.0847;AMR_AF=0.1412;AN=2542;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0.0641;END=149928796;EUR_AF=0.2141;MC=UW_VH_2962;NS=2504;SAS_AF=0.1128;SVTYPE=DEL	GT	.
X	150268163	BI_GS_DEL1_B5_P3048_219	C	<CN0>	100	PASS	AC=299;AF=0.118146;AFR_AF=0.1077;AMR_AF=0.0363;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1702;END=150270796;EUR_AF=0.0274;MC=UW_VH_6479,YL_CN_LWK_4308,YL_CN_CDX_3911,UW_VH_3425,EM_DL_DEL107318;NS=2504;SAS_AF=0.234;SVTYPE=DEL	GT	.
X	150293934	BI_GS_DEL1_B4_P3048_39	A	<CN0>	100	PASS	AC=578;AF=0.255629;AFR_AF=0.2971;AMR_AF=0.2271;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0877;END=150295714;EUR_AF=0.4138;MC=YL_CN_PUR_5767,YL_CN_GWD_5979,YL_CN_TSI_4491,YL_CN_CEU_5515,UW_VH_1940,EM_DL_DEL101194958;NS=2504;SAS_AF=0.2284;SVTYPE=DEL	GT	.
X	150317479	DEL_pindel_54874	CACTATCACGAGAACAGCATGGGGGAAACCTCCTCCATGATCTGATTACCTCCACCTGGTCCCTCCTTGACATGTGTGGATTAAAATTCAAGATGAGATTTTGGGTGGGGACACAGCCACCT	C	.	PASS	AC=160;AF=0.0423841;AFR_AF=0.0209;AMR_AF=0.0515;AN=3775;CS=DEL_pindel;EAS_AF=0.0497;END=150317600;EUR_AF=0.0522;NS=2504;SAS_AF=0.0474;SVTYPE=DEL	GT	0
X	150386183	ALU_umary_ALU_12828	T	<INS:ME:ALU>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.0056;SVLEN=279;SVTYPE=ALU;TSD=null	GT	0
X	150420005	DEL_pindel_54876	ATTATGGTTAAATTGAAGCCAGACATTAGCTATGGATACAAGAGCTTAGGAAAAATTAATTAAAGTATTCTGGGAGAATCAATTAGCCATATGGAATTTATAATAAAGAGTATTGTATATTTTATCAGTATTTGTAACTTGTGTGCTACACATTATTTACCAATAAAAATATTCTATAAAAATATACTAGCATACCACTACTGTGAGAGAGAAAGCATTTCCTGCAGATAAAACCATTGTTAAATAACTCTAGCAAACAAATGCAGAGTAAATGTTTAAAGACTCAGGATTTATTTTTATTTTAGACTTACTTCTCCAGTTATCTCAATCTTAAAACTCAATTTTTAGGTCACAAAGTCAAACTCTTGTCT	A	.	PASS	AC=1099;AF=0.291126;AFR_AF=0.2672;AMR_AF=0.2977;AN=3775;CS=DEL_pindel;EAS_AF=0.2906;END=150420375;EUR_AF=0.2872;NS=2504;SAS_AF=0.3245;SVTYPE=DEL	GT	1
X	150537389	ALU_umary_ALU_12829	C	<INS:ME:ALU>	.	PASS	AC=16;AF=0.00423841;AFR_AF=0.016;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb7_2,1,278,+;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null	GT	0
X	150585730	UW_VH_18452	C	<CN0>	100	PASS	AC=28;AF=0.0683444;AFR_AF=0.0518;AMR_AF=0.0668;AN=2542;CIEND=0,243;CIPOS=-69,0;CS=DEL_union;EAS_AF=0.0641;END=150586802;EUR_AF=0.0888;MC=EM_DL_DEL101195026,BI_GS_DEL1_B3_P3048_19;NS=2504;SAS_AF=0.0752;SVTYPE=DEL	GT	.
X	150707071	UW_VH_2282	G	<CN0>	100	PASS	AC=203;AF=0.077351;AFR_AF=0.1974;AMR_AF=0.0363;AN=2542;CIEND=0,373;CIPOS=-363,0;CS=DEL_union;EAS_AF=0.0079;END=150712355;EUR_AF=0.0392;MC=BI_GS_DEL1_B4_P3048_107,YL_CN_PUR_5769,YL_CN_FIN_4381,EM_DL_DEL107333;NS=2504;SAS_AF=0.0543;SVTYPE=DEL	GT	.
X	150711379	BI_GS_DEL1_B2_P3048_368	T	<CN0>	100	PASS	AC=257;AF=0.204503;AFR_AF=0.336;AMR_AF=0.1641;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1374;END=150712579;EUR_AF=0.158;MC=UW_VH_8732;NS=2504;SAS_AF=0.1713;SVTYPE=DEL	GT	.
X	150826291	DUP_gs.X_CNV_X_150826291_150834971	T	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=150834971;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	150876871	UW_VH_8733	G	<CN0>	100	PASS	AC=61;AF=0.0500662;AFR_AF=0.0837;AMR_AF=0.0496;AN=2542;CIEND=0,355;CIPOS=-284,0;CS=DEL_union;EAS_AF=0.0353;END=150878517;EUR_AF=0.0431;MC=EM_DL_DEL101195083,YL_CN_YRI_5675,BI_GS_DEL1_B5_P3048_699;NS=2504;SAS_AF=0.0265;SVTYPE=DEL	GT	.
X	150934100	YL_CN_ACB_5174	C	<CN0>	100	PASS	AC=7;AF=0.00211921;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=150939459;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	150997048	DEL_pindel_54883	AGTCCACTTACCCAGAGGCACTGAGTCAGAGTTCCACATCATCCTTGCCCCGGCAGCCAGTCATGTGATCACTCTGATTCCCTGTACAGACCACCCCACCCCTGTCAGAGCCAGACCTCTGCACTTGGATCTAATCTCCATCTGCCTCCTTACCTTTGCTCTACCATTCCTTGTGCCCTGAACCAGAGCCATTCCCTCCTTCAAGCCCAGTTCTTCTCATCTTTTAAG	A	.	PASS	AC=32;AF=0.00847682;AFR_AF=0.007;AMR_AF=0.0057;AN=3775;CS=DEL_pindel;EAS_AF=0.0118;END=150997275;EUR_AF=0.0065;NS=2504;SAS_AF=0.0111;SVTYPE=DEL	GT	0
X	151218769	ALU_umary_ALU_12830	A	<INS:ME:ALU>	.	PASS	AC=13;AF=0.00344371;AFR_AF=0.011;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	151261523	ALU_umary_ALU_12831	T	<INS:ME:ALU>	.	PASS	AC=7;AF=0.0018543;AFR_AF=0.006;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	151345023	L1_umary_LINE1_3148	A	<INS:ME:LINE1>	.	PASS	AC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1079,5879,+;NS=2504;SAS_AF=0.0056;SVLEN=4800;SVTYPE=LINE1;TSD=null	GT	0
X	151473664	BI_GS_DEL1_B4_P3049_81	C	<CN0>	100	PASS	AC=7;AF=0.00317881;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-44,44;CIPOS=-44,44;CS=DEL_union;EAS_AF=0.0013;END=151477031;EUR_AF=0.0078;MC=YL_CN_CEU_5518;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	151565366	BI_GS_DEL1_B1_P3049_358	T	<CN0>	100	PASS	AC=15;AF=0.0296689;AFR_AF=0.0229;AMR_AF=0.0305;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0314;END=151566720;EUR_AF=0.0431;NS=2504;SAS_AF=0.0223;SVTYPE=DEL	GT	.
X	151759240	UW_VH_21680	A	<CN0>	100	PASS	AC=6;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,106;CIPOS=-147,0;CS=DEL_union;EAS_AF=0.0026;END=151763151;EUR_AF=0.0052;MC=BI_GS_DEL1_B4_P3049_124,YL_CN_JPT_4795;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	151831777	ALU_umary_ALU_12832	T	<INS:ME:ALU>	.	PASS	AC=29;AF=0.00768212;AFR_AF=0.0279;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,279,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=GATTTTGTTCTTTCTT	GT	0
X	151982308	DEL_pindel_54892	ATACAATATACACAGATTACCACATACATAGGTGCATGCCTGTCTGTCTCAGAAACGGCC	A	.	PASS	AC=1249;AF=0.330861;AFR_AF=0.3599;AMR_AF=0.3168;AN=3775;CS=DEL_pindel;EAS_AF=0.3154;END=151982367;EUR_AF=0.299;NS=2504;SAS_AF=0.351;SVTYPE=DEL	GT	1
X	151982765	DEL_pindel_54893	TTGCTAAATCCAGAGGGCAAACTCCAGCCTTCACTAGCTTCACCCAGGTGACCACTTCCTCTCCCTTTGCTTCTG	T	.	PASS	AC=2424;AF=0.642119;AFR_AF=0.6132;AMR_AF=0.6718;AN=3775;CS=DEL_pindel;EAS_AF=0.6492;END=151982839;EUR_AF=0.6423;NS=2504;SAS_AF=0.6532;SVTYPE=DEL	GT	0
X	152001805	ALU_umary_ALU_12833	G	<INS:ME:ALU>	.	PASS	AC=803;AF=0.212715;AFR_AF=0.331;AMR_AF=0.1355;AN=3775;CS=ALU_umary;EAS_AF=0.1688;EUR_AF=0.1749;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.1908;SVLEN=280;SVTYPE=ALU;TSD=AAAAGTTATATGTGG	GT	0
X	152048325	DUP_gs.X_CNV_X_152048325_152223267	C	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=152223267;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	152093580	UW_VH_18021	T	<CN0>	100	PASS	AC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,223;CIPOS=-282,0;CS=DEL_union;EAS_AF=0;END=152101608;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	152103859	DUP_gs.X_CNV_X_152103859_152107426	A	<CN0>,<CN2>	.	PASS	AC=15,4;AF=0.00397351,0.0010596;AFR_AF=0.014,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=152107426;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV	GT	0
X	152104023	UW_VH_12700	A	<CN0>	100	PASS	AC=20;AF=0.0111258;AFR_AF=0.0189;AMR_AF=0.0019;AN=2542;CIEND=0,264;CIPOS=-273,0;CS=DEL_union;EAS_AF=0.0052;END=152107459;EUR_AF=0.0157;MC=BI_GS_DEL1_B2_P3050_71,YL_CN_GWD_5985;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	.
X	152105370	BI_GS_DEL1_B1_P3050_71	A	<CN0>	100	PASS	AC=23;AF=0.0225166;AFR_AF=0.0249;AMR_AF=0.0267;AN=2542;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0.0118;END=152107509;EUR_AF=0.0248;MC=EM_DL_DEL107342;NS=2504;SAS_AF=0.0251;SVTYPE=DEL	GT	.
X	152107192	DEL_pindel_54899	TGATTGGCCTCTTGTACTGTGATATTGGAGTCCACTGTGTGCACAGCCCTCTACTCACAGTGTCTCATACGGTTCTCCTCACAGTCTCTCAAAGGTTTATGCCTAATTACAACAAAACCCAAAAGCCTGGAGCCTAGGTCTCTGTGCCTCCTGGGAAGGATAGTGCTCCGAAGAAAACAGCCGCAGCTGAGATAGAGTGATGGCAGTGAGGAGGGTACTACTTAGGTGGGTGGAAAAGGCAACTCAGGCGATCTCCTCTAAAGAG	T	.	PASS	AC=1057;AF=0.28;AFR_AF=0.2672;AMR_AF=0.2844;AN=3775;CS=DEL_pindel;EAS_AF=0.2644;END=152107456;EUR_AF=0.2742;NS=2504;SAS_AF=0.3175;SVTYPE=DEL	GT	1
X	152342861	DUP_gs.X_CNV_X_152342861_152367832	G	<CN0>,<CN2>	.	PASS	AC=0,6;AF=0,0.0015894;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=152367832;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	152350177	DUP_gs.X_CNV_X_152350177_152372400	T	<CN0>,<CN2>	.	PASS	AC=0,7;AF=0,0.0018543;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=152372400;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP	GT	0
X	152350641	BI_GS_DEL1_B5_P3050_180	G	<CN0>	100	PASS	AC=82;AF=0.138543;AFR_AF=0.1037;AMR_AF=0.1546;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0.1322;END=152351384;EUR_AF=0.1527;NS=2504;SAS_AF=0.1671;SVTYPE=DEL	GT	.
X	152360625	YL_CN_IBS_4170	T	<CN0>	100	PASS	AC=10;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=152367335;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	152413932	DUP_gs.X_CNV_X_152413932_152529446	T	<CN0>,<CN2>	.	PASS	AC=0,4;AF=0,0.0010596;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=152529446;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	152414940	DUP_gs.X_CNV_X_152414940_152476204	A	<CN0>,<CN2>	.	PASS	AC=0,5;AF=0,0.0013245;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=152476204;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP	GT	0
X	152746729	DEL_pindel_54909	GGCAGGCCCTGGGAGCCTCGGGCAAGCCCCTGTTCCTCAGTAGGGCCCCTGTT	G	.	PASS	AC=1442;AF=0.381987;AFR_AF=0.5284;AMR_AF=0.3187;AN=3775;CS=DEL_pindel;EAS_AF=0.3128;END=152746781;EUR_AF=0.3264;NS=2504;SAS_AF=0.3565;SVTYPE=DEL	GT	1
X	152803047	UW_VH_15709	C	<CN0>	100	PASS	AC=79;AF=0.107815;AFR_AF=0.0987;AMR_AF=0.1469;AN=2542;CIEND=0,153;CIPOS=-142,0;CS=DEL_union;EAS_AF=0.0877;END=152804209;EUR_AF=0.1266;MC=EM_DL_DEL101195482,BI_GS_DEL1_B3_P3050_16;NS=2504;SAS_AF=0.0933;SVTYPE=DEL	GT	.
X	152807507	DEL_pindel_54912	TAGGAGGCGGGAGGTGGCGGGGGTGGGGGAGGTGGGGGAACACGGGGCAGGGCAGAGTGGTTTCAGACACAG	T	.	PASS	AC=2161;AF=0.57245;AFR_AF=0.6321;AMR_AF=0.5019;AN=3775;CS=DEL_pindel;EAS_AF=0.5995;END=152807578;EUR_AF=0.5078;NS=2504;SAS_AF=0.5808;SVTYPE=DEL	GT	0
X	152863846	BI_GS_DEL1_B5_P3050_464	C	<CN0>	100	PASS	AC=5;AF=0.00503311;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0.0065;END=152867635;EUR_AF=0.0104;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	152883216	ALU_umary_ALU_12834	G	<INS:ME:ALU>	.	PASS	AC=146;AF=0.0386755;AFR_AF=0.1396;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYa4_5,4,281,+;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=AAGAAACTATTGCCTG	GT	0
X	152895321	BI_GS_DEL1_B3_P3050_17	A	<CN0>	100	PASS	AC=46;AF=0.0884768;AFR_AF=0.0887;AMR_AF=0.0859;AN=2542;CIEND=-31,31;CIPOS=-31,31;CS=DEL_union;EAS_AF=0.072;END=152896285;EUR_AF=0.0836;NS=2504;SAS_AF=0.1128;SVTYPE=DEL	GT	.
X	152943315	DEL_pindel_54917	GTATATATACACTAACCCATGTACATATAGATAGATATGTAGTATATATAGTGTA	G	.	PASS	AC=1127;AF=0.298543;AFR_AF=0.2931;AMR_AF=0.2977;AN=3775;CS=DEL_pindel;EAS_AF=0.2906;END=152943369;EUR_AF=0.282;NS=2504;SAS_AF=0.3329;SVTYPE=DEL	GT	1
X	153030469	BI_GS_DEL1_B2_P3051_15	C	<CN0>	100	PASS	AC=10;AF=0.0309934;AFR_AF=0.0269;AMR_AF=0.0382;AN=2542;CIEND=-58,58;CIPOS=-58,58;CS=DEL_union;EAS_AF=0.0353;END=153035081;EUR_AF=0.0483;NS=2504;SAS_AF=0.0084;SVTYPE=DEL	GT	.
X	153255724	BI_GS_DEL1_B4_P3051_30	C	<CN0>	100	PASS	AC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-29,30;CIPOS=-29,30;CS=DEL_union;EAS_AF=0.0026;END=153262895;EUR_AF=0.0013;MC=YL_CN_ITU_4785;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	153413538	EM_DL_DEL101195634	T	<CN0>	100	PASS	AC=343;AF=0.23947;AFR_AF=0.4696;AMR_AF=0.1622;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.161;END=153414996;EUR_AF=0.1266;NS=2504;SAS_AF=0.1783;SVTYPE=DEL	GT	.
X	153622445	UW_VH_10919	A	<CN0>	100	PASS	AC=47;AF=0.0890066;AFR_AF=0.0718;AMR_AF=0.0878;AN=2542;CIEND=0,96;CIPOS=-148,0;CS=DEL_union;EAS_AF=0.0746;END=153624732;EUR_AF=0.0496;NS=2504;SAS_AF=0.1713;SVTYPE=DEL	GT	.
X	153629278	DEL_pindel_54923	TTGACGGGGAAGGAACTTCCTCTGGGAACCTTTGGGTCATTGCCCTTTCACTTCAGAAACAGGTTGACAACTCAGCCCTGCTCATGAGGCAGCAAACCCTGCAAAGGGCTGGGACTGGTGGCCTTATGTCAGTTGTCTACTCTGGAGCTTGACTTGGACCTCCCCAGGTCCTAGGCAGTAGGTTGAAAAACACTGAAGTGCTTTTCATGAAGCACAGCTGCAGCAAAGCCTTGCAATCCCAGGCTGGGGTCAGCCTACAGTTGTGTTGCTTATTACAACACATGCGGACCAAGAGGGGCTTGTGGGCTAGAGGC	T	.	PASS	AC=752;AF=0.199205;AFR_AF=0.1685;AMR_AF=0.2156;AN=3775;CS=DEL_pindel;EAS_AF=0.1832;END=153629591;EUR_AF=0.1997;NS=2504;SAS_AF=0.2465;SVTYPE=DEL	GT	1
X	153630779	DEL_pindel_54924	CCCTACCCCAACCCAGAGCCCACTTTGTCTCCACTCCTGATACTACACTACCTGGCAGGTGGCATGAGTGCAGGGCCCCTGGCTTCCTCTCCTAATCTAGGCACAAGCCCAACCAAAGAACAAGAGCCAAATCAAACAAGGCAGGCAGGGGTGGACTACAGTCACAGGGCAACTATAGTTGAAGCCCCCCAGCCCCA	C	.	PASS	AC=1228;AF=0.325298;AFR_AF=0.3071;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.3102;END=153630975;EUR_AF=0.3277;NS=2504;SAS_AF=0.376;SVTYPE=DEL	GT	1
X	153635023	UW_VH_21715	T	<CN0>	100	PASS	AC=131;AF=0.205298;AFR_AF=0.1695;AMR_AF=0.2137;AN=2542;CIEND=0,154;CIPOS=-193,0;CS=DEL_union;EAS_AF=0.1937;END=153636375;EUR_AF=0.1697;NS=2504;SAS_AF=0.2994;SVTYPE=DEL	GT	.
X	153728656	YL_CN_ASW_4654	C	<CN0>	100	PASS	AC=4;AF=0.00238411;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=153733851;EUR_AF=0.0026;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	153733651	DEL_pindel_54926	GTTTTGCTGTGAACCTAAAATGGCTCTAAGAAGGAAAGTTTACAAAAACAAAAAAGGAATGGAATACACGTAGAAAGTTCCTGGTGCAGAGGCAGGACTGGCATCACCATCGTTTCCTCCCTGGTGAGCCGCTCCTCCAGGGCACCCCTGTGCCTCCAACCCCACATGTGCCTGCTCCAGAAGCAC	G	.	PASS	AC=230;AF=0.0609271;AFR_AF=0.0249;AMR_AF=0.0763;AN=3775;CS=DEL_pindel;EAS_AF=0.0772;END=153733836;EUR_AF=0.077;NS=2504;SAS_AF=0.0655;SVTYPE=DEL	GT	0
X	153733755	DEL_pindel_54930	CACCATCGTTTCCTCCCTGGTGAGCCGCTCCTCCAGGGCACCCCTGTGCCTCCAACCCCACATGTGCCTGCTCCAGAAGCACTTTTGTCTTCTGAGGCTCTGTCTGCGCTCTGT	C	.	PASS	AC=975;AF=0.258278;AFR_AF=0.2473;AMR_AF=0.25;AN=3775;CS=DEL_pindel;EAS_AF=0.2448;END=153733868;EUR_AF=0.2533;NS=2504;SAS_AF=0.2994;SVTYPE=DEL	GT	1
X	153733767	BI_GS_DEL1_B2_P3051_352	C	<CN0>	100	PASS	AC=217;AF=0.249801;AFR_AF=0.2164;AMR_AF=0.2805;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.2212;END=153734279;EUR_AF=0.2702;NS=2504;SAS_AF=0.2827;SVTYPE=DEL	GT	.
X	153733776	DEL_pindel_54932	GAGCCGCTCCTCCAGGGCACCCCTGTGCCTCCAACCCCACATGTGCCTGCTCCAGA	G	.	PASS	AC=820;AF=0.217219;AFR_AF=0.2054;AMR_AF=0.2309;AN=3775;CS=DEL_pindel;EAS_AF=0.2029;END=153733831;EUR_AF=0.1997;NS=2504;SAS_AF=0.2577;SVTYPE=DEL	GT	0
X	153819664	DUP_gs.X_CNV_X_153819664_153830620	A	<CN0>,<CN2>	.	PASS	AC=2,1;AF=0.0005298,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0.0013;END=153830620;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV	GT	0
X	153820981	DUP_gs.X_CNV_X_153820981_153914845	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=153914845;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	153917072	SVA_umary_SVA_849	A	<INS:ME:SVA>	.	PASS	AC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,36,1549,-;NS=2504;SAS_AF=0;SVLEN=1513;SVTYPE=SVA;TSD=null	GT	0
X	154008834	DEL_pindel_54940	CAGGTGGTTGGCGGTCCCTGTCCAAATTCTAAGTGTGTGTGCTCTTGGACCCAGTGATCCTACTTGGAGTTTTTCCTACAGATATATTTGCACACATGTGCTATATGCACAGGGCTATTGACTGCAGTATTACACATGCATGCAGCAGAAGACCAAGCAGCTATAGAGAAAAAGAGTTCCTCACACCCTGATAGGGAA	C	.	PASS	AC=1196;AF=0.316821;AFR_AF=0.321;AMR_AF=0.2977;AN=3775;CS=DEL_pindel;EAS_AF=0.3063;END=154009031;EUR_AF=0.3003;NS=2504;SAS_AF=0.3538;SVTYPE=DEL	GT	1
X	154014130	DEL_pindel_54941	AGGAAATCCCAGAAACAGCATGGCTGGTAGAAGCGCACTAGCTTGGGAAACAGGAGACCAGGGAGGGCTCAGTCCCAGCACTGTCACGTGCTTGGTAACTATGG	A	.	PASS	AC=654;AF=0.173245;AFR_AF=0.1236;AMR_AF=0.2023;AN=3775;CS=DEL_pindel;EAS_AF=0.1754;END=154014233;EUR_AF=0.1815;NS=2504;SAS_AF=0.2103;SVTYPE=DEL	GT	1
X	154017323	DEL_pindel_54942	GCGGCGGTCTTAGGCATGGGTGTACTCAGTTTGTGAAAATTCATCCAGTTTTATACTTGTGATTTGTGCCCTT	G	.	PASS	AC=338;AF=0.0895364;AFR_AF=0.0369;AMR_AF=0.1088;AN=3775;CS=DEL_pindel;EAS_AF=0.1008;END=154017395;EUR_AF=0.1136;NS=2504;SAS_AF=0.1114;SVTYPE=DEL	GT	1
X	154110804	UW_VH_24038	T	<CN0>	100	PASS	AC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,278;CIPOS=-275,0;CS=DEL_union;EAS_AF=0;END=154607929;EUR_AF=0.0052;MC=UW_VH_24623;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	154119649	DUP_gs.X_CNV_X_154119649_154276173	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154276173;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	154265736	YL_CN_ITU_4787	G	<CN0>	100	PASS	AC=6;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=154273101;EUR_AF=0.0026;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	154265886	DUP_gs.X_CNV_X_154265886_154272944	G	<CN0>,<CN2>	.	PASS	AC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154272944;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV	GT	0
X	154275425	ALU_umary_ALU_12835	T	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null	GT	0
X	154285159	DEL_pindel_54945	CTTGAGTAGGTTGTAATAAATAGTCTGGCCTCAGACTGTATTCTGATTGTCTGAATTAAGATCTGTAGGTAGGTCCCTCCTGAAGTTTTTTCCCAGCTGGCTGCCTCTACGACTGTGAGGGTCATGGTTGAGGTCAGTATTGCAGGTTGGCCTCATCCTGCTAGTATGAGAACGGCTGTGAGTTCTGCCCACGGTGTGAGGCCACTGTGACCACTTGGGATTGTGCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAG	C	.	PASS	AC=871;AF=0.230728;AFR_AF=0.2154;AMR_AF=0.2538;AN=3775;CS=DEL_pindel;EAS_AF=0.2186;END=154285433;EUR_AF=0.2245;NS=2504;SAS_AF=0.2549;SVTYPE=DEL	GT	1
X	154285270	UW_VH_3175	A	<CN0>	100	PASS	AC=226;AF=0.236291;AFR_AF=0.2124;AMR_AF=0.2691;AN=2542;CIEND=0,236;CIPOS=-268,0;CS=DEL_union;EAS_AF=0.1688;END=154285819;EUR_AF=0.2859;NS=2504;SAS_AF=0.2646;SVTYPE=DEL	GT	.
X	154285287	DEL_pindel_54949	TGAGGTCAGTATTGCAGGTTGGCCTCATCCTGCTAGTATGAGAACGGCTGTGA	T	.	PASS	AC=484;AF=0.128212;AFR_AF=0.0887;AMR_AF=0.1622;AN=3775;CS=DEL_pindel;EAS_AF=0.1309;END=154285339;EUR_AF=0.141;NS=2504;SAS_AF=0.1421;SVTYPE=DEL	GT	0
X	154285781	DEL_pindel_54954	TGGAATGTGTTCGGGGTTTCATCGCCCCCTTGTGGCGGCGACGTGGTAACACCGCACTCAA	T	.	PASS	AC=907;AF=0.240265;AFR_AF=0.2343;AMR_AF=0.2156;AN=3775;CS=DEL_pindel;EAS_AF=0.2343;END=154285841;EUR_AF=0.2337;NS=2504;SAS_AF=0.2799;SVTYPE=DEL	GT	1
X	154298802	DUP_gs.X_CNV_X_154298802_154384198	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154384198;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	154313357	DEL_pindel_54955	GAGCAGGTCTGCCACTTCACAGGAACATTTTCACCACGTAGCTCCTAAAAGGAAATGAGAAGGCCTATTTCTGAAATGTTTCCATGTCCCCTTGGGGGGAAAACAGTTTCAGTTCATTCCTCCACTGACATTAAAAGAGAATGTCTATTTCAGGCAAGAATAATAAAATGGGCTTTTAATACTACATATGGTTATTTCATCATATTTCTTAGGAATGGTGCTGTGTAATATCACTGTGCACAAAATCACAGATTCTTCAAGAAAACTGTTTCTTAAATACCTGTGTAATTGCCCACAAAGGGGCCCAGTGCATGTGACATTCAGTCTAACAGCTTAACCAGCTCTCTGCCGTACTTGCCATACAGAAAAGCTGAAACTGCTGGTTTCCAGGTCAGTTTATGTGGTCCAATCCGTAACCTGCTTTCTTCCTGAAAGACCCAACCAGAGGAAACTGACCAAAAGAGCATCTCTCGTGTACCAGGCCTGAGTTCAACAGAAAACAGATAAGCGACCTCCAACTTTTTATCCCTGGGTCTGAAGTCACATCCTGAAGAGTTTGGTTACACCAGTAATGAAACATACATGGTTTCCTGTTGCTTTCCTTTCTTAATTTCCGGTGAGGATAATGTCACCAGAAAGTTCCATCTCCCTCTCTCAGTAACAGGGAGAAGTGGAACAGGCAATTGGATCTCA	G	.	PASS	AC=701;AF=0.185695;AFR_AF=0.1456;AMR_AF=0.208;AN=3775;CS=DEL_pindel;EAS_AF=0.1976;END=154314049;EUR_AF=0.1867;NS=2504;SAS_AF=0.2117;SVTYPE=DEL	GT	1
X	154314369	DEL_pindel_54956	ACACCTTGGAAATCATGAACGTCCCGTCTGTGGTCACAGCTGTCTGTCCAGTGCTGGCTGACGTCCAAGCTAACAGCCGCCCCATTGGGAAACTTCATGCTGATCACAGTGGCATCTGCATCCTTTAAGGAGGCCATATCTGGTCAGAAGGCATGTCCGAGAGAAAG	A	.	PASS	AC=931;AF=0.246623;AFR_AF=0.2393;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2277;END=154314535;EUR_AF=0.248;NS=2504;SAS_AF=0.2855;SVTYPE=DEL	GT	1
X	154385298	YL_CN_FIN_4390	C	<CN0>	100	PASS	AC=28;AF=0.0108609;AFR_AF=0.008;AMR_AF=0.021;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=154404162;EUR_AF=0.0248;MC=YL_CN_GWD_5990,BI_GS_DEL1_B1_P3052_228;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	154386087	DUP_gs.X_CNV_X_154386087_154420956	T	<CN0>,<CN2>	.	PASS	AC=17,1;AF=0.00450331,0.0002649;AFR_AF=0.003,0.001;AMR_AF=0.0134,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154420956;EUR_AF=0.0078,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV	GT	0
X	154402183	DUP_gs.X_CNV_X_154402183_154449882	A	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154449882;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	154403901	DEL_pindel_54958	GATGATTTTATAAGAGGAAACTCCTTTCGCTTGGTTCACATTCTCTCTTATCTGCCTCTATGTAAGACGTGCCATTTGCCTTCCACC	G	.	PASS	AC=481;AF=0.127417;AFR_AF=0.0768;AMR_AF=0.1374;AN=3775;CS=DEL_pindel;EAS_AF=0.1688;END=154403987;EUR_AF=0.1345;NS=2504;SAS_AF=0.1393;SVTYPE=DEL	GT	0
X	154403956	DEL_pindel_54960	CTCTATGTAAGACGTGCCATTTGCCTTCCACCATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGTGAGTCCATGAAACCTCTTTT	C	.	PASS	AC=366;AF=0.0969536;AFR_AF=0.0469;AMR_AF=0.1031;AN=3775;CS=DEL_pindel;EAS_AF=0.1479;END=154404042;EUR_AF=0.1097;NS=2504;SAS_AF=0.0947;SVTYPE=DEL	GT	0
X	154485925	BI_GS_DEL1_B4_P3052_74	T	<CN0>	100	PASS	AC=998;AF=0.418013;AFR_AF=0.7627;AMR_AF=0.3931;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2893;END=154486943;EUR_AF=0.2232;MC=UW_VH_5593,YL_CN_BEB_3771,YL_CN_JPT_4798,EM_DL_DEL101195842;NS=2504;SAS_AF=0.2994;SVTYPE=DEL	GT	.
X	154511616	ALU_umary_ALU_12836	T	<INS:ME:ALU>	.	PASS	AC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYe5,2,268,-;NS=2504;SAS_AF=0;SVLEN=266;SVTYPE=ALU;TSD=null	GT	0
X	154553899	BI_GS_DEL1_B3_P3052_23	C	<CN0>	100	PASS	AC=8;AF=0.0103311;AFR_AF=0.012;AMR_AF=0.0153;AN=2542;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0.0092;END=154556947;EUR_AF=0.0104;NS=2504;SAS_AF=0.0056;SVTYPE=DEL	GT	.
X	154632079	BI_GS_DEL1_B4_P3052_89	T	<CN0>	100	PASS	AC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.0026;END=154645930;EUR_AF=0.0039;MC=YL_CN_JPT_4800;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	154658693	DUP_gs.X_CNV_X_154658693_154683572	T	<CN0>,<CN2>	.	PASS	AC=0,7;AF=0,0.0018543;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=154683572;EUR_AF=0,0.0052;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	154726219	DUP_gs.X_CNV_X_154726219_154770591	G	<CN0>,<CN2>	.	PASS	AC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154770591;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP	GT	0
X	154762277	DUP_gs.X_CNV_X_154762277_154778295	G	<CN0>,<CN2>	.	PASS	AC=3,1;AF=0.0007947,0.0002649;AFR_AF=0,0;AMR_AF=0.0057,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154778295;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	154762298	BI_GS_DEL1_B5_P3052_515	T	<CN0>	100	PASS	AC=12;AF=0.00344371;AFR_AF=0.004;AMR_AF=0.0076;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0.0013;END=154778228;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	154766103	DUP_gs.X_CNV_X_154766103_154778119	T	<CN0>,<CN2>	.	PASS	AC=6,1;AF=0.0015894,0.0002649;AFR_AF=0,0;AMR_AF=0.0076,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=154778119;EUR_AF=0.0013,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV	GT	0
X	154771110	BI_GS_DEL1_B2_P3052_320	T	<CN0>	100	PASS	AC=20;AF=0.00582781;AFR_AF=0.004;AMR_AF=0.0095;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0039;END=154778240;EUR_AF=0.0117;MC=YL_CN_CDX_3922;NS=2504;SAS_AF=0.0014;SVTYPE=DEL	GT	.
X	154771291	BI_GS_DEL1_B4_P3052_103	C	<CN0>	100	PASS	AC=19;AF=0.00556291;AFR_AF=0.004;AMR_AF=0.0095;AN=2542;CIEND=-18,18;CIPOS=-18,18;CS=DEL_union;EAS_AF=0.0026;END=154781130;EUR_AF=0.0104;MC=YL_CN_CEU_5527;NS=2504;SAS_AF=0.0028;SVTYPE=DEL	GT	.
X	154776815	BI_GS_DEL1_B3_P3052_31	T	<CN0>	100	PASS	AC=39;AF=0.0140397;AFR_AF=0.0249;AMR_AF=0.0076;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0013;END=154786039;EUR_AF=0.0104;MC=YL_CN_GIH_3519,YL_CN_PJL_5146,YL_CN_ACB_5187,BI_GS_DEL1_B5_P3052_531;NS=2504;SAS_AF=0.0209;SVTYPE=DEL	GT	.
X	154778111	UW_VH_8912	T	<CN0>	100	PASS	AC=57;AF=0.0214569;AFR_AF=0.0499;AMR_AF=0.0095;AN=2542;CIEND=0,345;CIPOS=-304,0;CS=DEL_union;EAS_AF=0.0013;END=154782566;EUR_AF=0.0117;MC=YL_CN_MSL_4135,BI_GS_DEL1_B4_P3052_107,YL_CN_ASW_4661;NS=2504;SAS_AF=0.0223;SVTYPE=DEL	GT	.
X	154778177	BI_GS_DEL1_B2_P3052_329	A	<CN0>	100	PASS	AC=321;AF=0.309139;AFR_AF=0.3131;AMR_AF=0.2767;AN=2542;CIEND=-7,8;CIPOS=-7,8;CS=DEL_union;EAS_AF=0.3207;END=154778659;EUR_AF=0.3055;NS=2504;SAS_AF=0.3189;SVTYPE=DEL	GT	.
X	154781652	BI_GS_DEL1_B1_P3052_396	G	<CN0>	100	PASS	AC=38;AF=0.0145695;AFR_AF=0.0249;AMR_AF=0.0134;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0013;END=154787659;EUR_AF=0.0117;MC=BI_GS_DEL1_B5_P3052_535,YL_CN_LWK_4318,UW_VH_12523,EM_DL_DEL107376;NS=2504;SAS_AF=0.0181;SVTYPE=DEL	GT	.
X	154790161	UW_VH_2775	C	<CN0>	100	PASS	AC=1496;AF=0.618013;AFR_AF=0.2542;AMR_AF=0.6565;AN=2542;CIEND=0,361;CIPOS=-327,0;CS=DEL_union;EAS_AF=0.7539;END=154790501;EUR_AF=0.8068;NS=2504;SAS_AF=0.7521;SVTYPE=DEL	GT	.
X	154790197	YL_CN_PUR_5790	C	<CN0>	100	PASS	AC=1417;AF=0.544901;AFR_AF=0.1176;AMR_AF=0.5992;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7238;END=154802370;EUR_AF=0.7637;MC=BI_GS_DEL1_B2_P3052_333,EM_DL_DEL107380;NS=2504;SAS_AF=0.6783;SVTYPE=DEL	GT	.
X	154790201	L1_umary_LINE1_3149	G	<INS:ME:LINE1>	.	PASS	AC=1743;AF=0.461722;AFR_AF=0.0867;AMR_AF=0.5076;AN=3775;CS=L1_umary;EAS_AF=0.6217;EUR_AF=0.6436;MEINFO=LINE1,4726,5788,-;NS=2504;SAS_AF=0.5877;SVLEN=1062;SVTYPE=LINE1;TSD=null	GT	0
X	154798201	YL_CN_IBS_4183	T	<CN0>	100	PASS	AC=1547;AF=0.60106;AFR_AF=0.3061;AMR_AF=0.626;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7277;END=154803718;EUR_AF=0.7676;MC=YL_CN_CLM_3950,YL_CN_PUR_5791;NS=2504;SAS_AF=0.6825;SVTYPE=DEL	GT	.
X	154867954	DEL_pindel_54962	AATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	A	.	PASS	AC=917;AF=0.242914;AFR_AF=0.2014;AMR_AF=0.2844;AN=3775;CS=DEL_pindel;EAS_AF=0.2592;END=154868024;EUR_AF=0.2467;NS=2504;SAS_AF=0.2493;SVTYPE=DEL	GT	0
X	154876376	UW_VH_9227	C	<CN0>	100	PASS	AC=12;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=0,242;CIPOS=-235,0;CS=DEL_union;EAS_AF=0.0013;END=154880988;EUR_AF=0.0065;MC=YL_CN_CLM_3951,EM_DL_DEL107383,BI_GS_DEL1_B1_P3052_440;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	154882092	BI_GS_DEL1_B4_P3052_125	C	<CN0>	100	PASS	AC=12;AF=0.00344371;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.0065;END=154893477;EUR_AF=0.0052;MC=YL_CN_JPT_4807,EM_DL_DEL107384;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	154909099	BI_GS_DEL1_B3_P3052_44	A	<CN0>	100	PASS	AC=6;AF=0.00211921;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-32,32;CIPOS=-32,32;CS=DEL_union;EAS_AF=0;END=154918556;EUR_AF=0.0052;MC=YL_CN_MSL_4139;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	154909888	ALU_umary_ALU_12837	A	<INS:ME:ALU>	.	PASS	AC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,259,-;NS=2504;SAS_AF=0;SVLEN=258;SVTYPE=ALU;TSD=null	GT	0
X	154916967	BI_GS_DEL1_B3_P3052_45	G	<CN0>	100	PASS	AC=6;AF=0.00423841;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.0013;END=154933972;EUR_AF=0.0065;MC=YL_CN_PJL_5150;NS=2504;SAS_AF=0.0042;SVTYPE=DEL	GT	.
X	154918469	UW_VH_1324	T	<CN0>	100	PASS	AC=872;AF=0.358146;AFR_AF=0.5972;AMR_AF=0.3531;AN=2542;CIEND=0,376;CIPOS=-514,0;CS=DEL_union;EAS_AF=0.2788;END=154921719;EUR_AF=0.1984;MC=BI_GS_DEL1_B4_P3052_134,EM_DL_DEL107886,YL_CN_PEL_4427,YL_CN_TSI_4507;NS=2504;SAS_AF=0.2827;SVTYPE=DEL	GT	.
X	154957224	UW_VH_10351	T	<CN0>	100	PASS	AC=7;AF=0.00219649;AFR_AF=0.0045;AMR_AF=0.0014;AN=2542;CIEND=0,175;CIPOS=-177,0;CS=DEL_union;EAS_AF=0;END=154965634;EUR_AF=0.003;MC=BI_GS_DEL1_B1_P3052_498,YL_CN_GWD_6002;NS=2504;SAS_AF=0.001;SVTYPE=DEL	GT	.
X	155040763	UW_VH_21016	T	<CN0>	100	PASS	AC=6;AF=0.00179712;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=0,82;CIPOS=-150,0;CS=DEL_union;EAS_AF=0.001;END=155047741;EUR_AF=0.003;MC=BI_GS_DEL1_B4_P3053_10;NS=2504;SAS_AF=0.002;SVTYPE=DEL	GT	.
X	155090084	UW_VH_7995	A	<CN0>	100	PASS	AC=102;AF=0.0385383;AFR_AF=0.1369;AMR_AF=0.0159;AN=2542;CIEND=0,380;CIPOS=-324,0;CS=DEL_union;EAS_AF=0;END=155092227;EUR_AF=0.001;MC=YL_CN_ESN_4544,BI_GS_DEL1_B2_P3053_63;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	.
X	155146395	BI_GS_DEL1_B3_P3053_10	A	<CN0>	100	PASS	AC=4;AF=0.00119808;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=-28,29;CIPOS=-28,29;CS=DEL_union;EAS_AF=0;END=155148983;EUR_AF=0.002;NS=2504;SAS_AF=0.001;SVTYPE=DEL	GT	.



================================================
FILE: tests/AnnotSV/test_03_CDSandTxCoverage/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


# Check of the following output columns:
########################################
# - Overlapped_CDS_length
# - Overlapped_tx_length


# Check on the FCGR3A gene (NM_000569)
######################################
# 
# grep NM_000569 $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed
# 1       161511548       161519608       -       FCGR3A  NM_000569       161512801       161519526       161511548,161514490,161518210,161518800,161519486,      161512989,161514748,161518468,161518821,161519608,

# 1       161511549       161519608       -       FCGR3A  NM_000569       161512801       161519526       161511549,161514490,161518210,161518800,161519486,      161512989,161514748,161518468,161518821,161519608,
# 
# Truth = input/test_tcl.annotated.tsv.truth.sauv


mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv"

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/control_9deletions_FCGR3A_NM_000569.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37

compare=`$cut "./output/test_tcl.annotated.tsv"          "Tx;Overlapped_CDS_length;Overlapped_tx_length"`
truth=`$cut "./input/test_tcl.annotated.tsv.truth.sauv"  "Tx;Overlapped_CDS_length;Overlapped_tx_length"`

if [ "$compare" != "$truth" ]
then
        echo "error 1: not the expected values"
        exit 1
else
	echo "ok - Finished"
fi





================================================
FILE: tests/AnnotSV/test_03_CDSandTxCoverage/input/control_9deletions_FCGR3A_NM_000569.bed
================================================
1	161512000	161512500	DEL
1	161511000	161511600	DEL
1	161511000	161512900	DEL
1	161511000	161514600	DEL
1	161512500	161518300	DEL
1	161511000	161519950	DEL
1	161518600	161519950	DEL
1	161518810	161519850	DEL
1	161518810	161519500	DEL


================================================
FILE: tests/AnnotSV/test_03_CDSandTxCoverage/input/test_tcl.annotated.tsv.truth.sauv
================================================
AnnotSV_ID	SV_chrom	SV_start	SV_end	SV_length	SV_type	Samples_ID	Annotation_mode	CytoBand	Gene_name	Closest_left	Closest_right	Gene_count	Tx	Tx_version	Tx_start	Tx_end	Overlapped_tx_length	Overlapped_CDS_length	Overlapped_CDS_percent	Frameshift	Exon_count	Location	Location2	Dist_nearest_SS	Nearest_SS_type	Intersect_start	Intersect_end	RE_gene	P_gain_phen	P_gain_hpo	P_gain_source	P_gain_coord	P_loss_phen	P_loss_hpo	P_loss_source	P_loss_coord	P_ins_phen	P_ins_hpo	P_ins_source	P_ins_coord	po_P_gain_phen	po_P_gain_hpo	po_P_gain_source	po_P_gain_coord	po_P_gain_percent	po_P_loss_phen	po_P_loss_hpo	po_P_loss_source	po_P_loss_coord	po_P_loss_percent	P_snvindel_nb	P_snvindel_phen	B_gain_source	B_gain_coord	B_gain_AFmax	B_loss_source	B_loss_coord	B_loss_AFmax	B_ins_source	B_ins_coord	B_ins_AFmax	B_inv_source	B_inv_coord	B_inv_AFmax	po_B_gain_allG_source	po_B_gain_allG_coord	po_B_gain_someG_source	po_B_gain_someG_coord	po_B_loss_allG_source	po_B_loss_allG_coord	po_B_loss_someG_source	po_B_loss_someG_coord	Cosmic_ID	Cosmic_mut_typ	GC_content_left	GC_content_right	Repeat_coord_left	Repeat_type_left	Repeat_coord_right	Repeat_type_right	Gap_left	Gap_right	SegDup_left	SegDup_right	ENCODE_blacklist_left	ENCODE_blacklist_characteristics_left	ENCODE_blacklist_right	ENCODE_blacklist_characteristics_right	ACMG	HI	TS	DDD_HI_percent	ExAC_delZ	ExAC_dupZ	ExAC_cnvZ	ExAC_synZ	ExAC_misZ	GenCC_disease	GenCC_moi	GenCC_classification	GenCC_pmid	NCBI_gene_ID	OMIM_ID	OMIM_phenotype	OMIM_inheritance	OMIM_morbid	OMIM_morbid_candidate	LOEUF_bin	GnomAD_pLI	ExAC_pLI	AnnotSV_ranking_score	AnnotSV_ranking_criteria	ACMG_class
1_161511001_161514600_DEL_1	1	161511001	161514600	-3599	DEL	NA	full	q23.3	FCGR3A	HSPA6	FCGR2C	1																ATF6 (morbid/RE=EA_enhancer);MPZ (morbid/RE=EA_enhancer);SDHC (HI=3/morbid/RE=EA_enhancer)															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383	0.00;0.00;0.00;0.00;0.01;0.02	Immunodeficiency 20, 615707 (3) AR		dbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A	1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527	0.00;0.04;0.14;0.05;0.02;0.02;0.06;33.99			1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095			1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915	chr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730			1:161488422-161634845 DDD:3093;	chr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar			0.435	0.440	1:161510916-161511163	L2c					1:161479598-161518642	1:161479598-161518642								92.43				0.0515701444991238	-0.213860724130331						146740			yes		8	3.6955e-06	1.2227e-05	0.9	1A (cf Gene_count, RE_gene, +0.00);2D-4 (FCGR3A, +0.90);3A (1 gene, +0.00);5F (+0.00)	4
1_161511001_161514600_DEL_1	1	161511001	161514600	-3599	DEL	NA	split	q23.3	FCGR3A				NM_000569	8	161511548	161519608	3052	298	38	yes	5	exon4-txEnd	CDS-3'UTR	110	5'	161511548	161514600																										1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095																												92.43				0.0515701444991238	-0.213860724130331	autosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity	AR	Supportive	23006327[PMID]	2214	146740	Immunodeficiency 20, 615707 (3) AR	AR	yes		8	3.6955e-06	1.2227e-05			full=4
1_161512501_161518300_DEL_1	1	161512501	161518300	-5799	DEL	NA	full	q23.3	FCGR3A	HSPA6	FCGR2C	1																ATF6 (morbid/RE=EA_enhancer);MPZ (morbid/RE=EA_enhancer);SDHC (HI=3/morbid/RE=EA_enhancer)															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383	0.00;0.00;0.00;0.01;0.02;0.03	Immunodeficiency 20, 615707 (3) AR		dbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A	1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527	0.01;0.06;0.23;0.08;0.03;0.04;0.10;64.60			1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095			1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915	chr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730			1:161488422-161634845 DDD:3093;	chr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar			0.360	0.545							1:161479598-161518642	1:161479598-161518642								92.43				0.0515701444991238	-0.213860724130331						146740			yes		8	3.6955e-06	1.2227e-05	0.9	1A (cf Gene_count, RE_gene, +0.00);2D-4 (FCGR3A, +0.90);3A (1 gene, +0.00);5F (+0.00)	4
1_161512501_161518300_DEL_1	1	161512501	161518300	-5799	DEL	NA	split	q23.3	FCGR3A				NM_000569	8	161511548	161519608	5800	536	70	yes	5	exon3-exon5	CDS-3'UTR	90	5'	161512500	161518300																										1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095																												92.43				0.0515701444991238	-0.213860724130331	autosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity	AR	Supportive	23006327[PMID]	2214	146740	Immunodeficiency 20, 615707 (3) AR	AR	yes		8	3.6955e-06	1.2227e-05			full=4
1_161518601_161519950_DEL_1	1	161518601	161519950	-1349	DEL	NA	full	q23.3	FCGR3A	HSPA6	FCGR2C	1																															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383	0.00;0.00;0.00;0.00;0.00;0.01	Immunodeficiency 20, 615707 (3) AR		dbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A	1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527	0.00;0.01;0.05;0.02;0.01;0.01;0.02;15.04			1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095			1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915	chr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730			1:161488422-161634845 DDD:3093;chr1:161519612-161593482 dbVar;1:161519613-161593482 esv3587731	chr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar;1:161519613-161593482 1000g			0.535	0.545							1:161479598-161518642;1:161518644-161565122	1:161518644-161565122								92.43				0.0515701444991238	-0.213860724130331						146740			yes		8	3.6955e-06	1.2227e-05	0.9	1A (cf Gene_count, RE_gene, +0.00);2C-1 (FCGR3A, +0.90);3A (1 gene, +0.00);5F (+0.00)	4
1_161518601_161519950_DEL_1	1	161518601	161519950	-1349	DEL	NA	split	q23.3	FCGR3A				NM_001127592	2	161511548	161519893	1293	376	34	yes	5	txStart-intron2	5'UTR-CDS	135	3'	161518600	161519893																										1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095																												92.43				0.0515701444991238	-0.213860724130331	autosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity	AR	Supportive	23006327[PMID]	2214	146740	Immunodeficiency 20, 615707 (3) AR	AR	yes		8	3.6955e-06	1.2227e-05			full=4
1_161518811_161519500_DEL_1	1	161518811	161519500	-689	DEL	NA	full	q23.3	FCGR3A	HSPA6	FCGR2C	1																															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383	0.00;0.00;0.00;0.00;0.00;0.00	Immunodeficiency 20, 615707 (3) AR		dbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A	1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527	0.00;0.01;0.03;0.01;0.00;0.00;0.01;7.68			1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095			1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915	chr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730			1:161488422-161634845 DDD:3093;	chr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar			0.450	0.535							1:161518644-161565122	1:161518644-161565122								92.43				0.0515701444991238	-0.213860724130331						146740			yes		8	3.6955e-06	1.2227e-05	0.9	1A (cf Gene_count, RE_gene, +0.00);2E-1 (FCGR3A, +0.90);3A (1 gene, +0.00);5F (+0.00)	4
1_161518811_161519500_DEL_1	1	161518811	161519500	-689	DEL	NA	split	q23.3	FCGR3A				NM_000569	8	161511548	161519608	690	25	3	yes	5	exon1-exon2	CDS	10	5'	161518810	161519500																										1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095																												92.43				0.0515701444991238	-0.213860724130331	autosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity	AR	Supportive	23006327[PMID]	2214	146740	Immunodeficiency 20, 615707 (3) AR	AR	yes		8	3.6955e-06	1.2227e-05			full=4
1_161518811_161519850_DEL_1	1	161518811	161519850	-1039	DEL	NA	full	q23.3	FCGR3A	HSPA6	FCGR2C	1																															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383	0.00;0.00;0.00;0.00;0.00;0.01	Immunodeficiency 20, 615707 (3) AR		dbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A	1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527	0.00;0.01;0.04;0.01;0.01;0.01;0.02;11.58			1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095			1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915	chr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730			1:161488422-161634845 DDD:3093;chr1:161519612-161593482 dbVar;1:161519613-161593482 esv3587731	chr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar;1:161519613-161593482 1000g			0.450	0.570							1:161518644-161565122	1:161518644-161565122								92.43				0.0515701444991238	-0.213860724130331						146740			yes		8	3.6955e-06	1.2227e-05	0.9	1A (cf Gene_count, RE_gene, +0.00);2C-1 (FCGR3A, +0.90);3A (1 gene, +0.00);5F (+0.00)	4
1_161518811_161519850_DEL_1	1	161518811	161519850	-1039	DEL	NA	split	q23.3	FCGR3A				NM_001127592	2	161511548	161519893	1040	366	33	no	5	exon1-exon2	5'UTR-CDS	10	5'	161518810	161519850																										1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095																												92.43				0.0515701444991238	-0.213860724130331	autosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity	AR	Supportive	23006327[PMID]	2214	146740	Immunodeficiency 20, 615707 (3) AR	AR	yes		8	3.6955e-06	1.2227e-05			full=4
1_161511001_161512900_DEL_1	1	161511001	161512900	-1899	DEL	NA	full	q23.3	FCGR3A	HSPA6	FCGR2C	1																															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383	0.00;0.00;0.00;0.00;0.01;0.01	Immunodeficiency 20, 615707 (3) AR		dbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A	1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527	0.00;0.02;0.07;0.03;0.01;0.01;0.03;15.06			1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095			1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915	chr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730			1:161488422-161634845 DDD:3093;	chr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar			0.435	0.425	1:161510916-161511163	L2c					1:161479598-161518642	1:161479598-161518642								92.43				0.0515701444991238	-0.213860724130331						146740			yes		8	3.6955e-06	1.2227e-05	0.45	1A (cf Gene_count, RE_gene, +0.00);2D-3 (FCGR3A, +0.45);3A (1 gene, +0.00);5F (+0.00)	3
1_161511001_161512900_DEL_1	1	161511001	161512900	-1899	DEL	NA	split	q23.3	FCGR3A				NM_000569	8	161511548	161519608	1352	99	12	no	5	exon5-txEnd	CDS-3'UTR	89	3'	161511548	161512900																										1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095																												92.43				0.0515701444991238	-0.213860724130331	autosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity	AR	Supportive	23006327[PMID]	2214	146740	Immunodeficiency 20, 615707 (3) AR	AR	yes		8	3.6955e-06	1.2227e-05			full=3
1_161511001_161511600_DEL_1	1	161511001	161511600	-599	DEL	NA	full	q23.3	FCGR3A	HSPA6	FCGR2C	1																															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383	0.00;0.00;0.00;0.00;0.00;0.00	Immunodeficiency 20, 615707 (3) AR		dbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A	1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527	0.00;0.01;0.02;0.01;0.00;0.00;0.01;0.58			1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095			1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915	chr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730			1:161488422-161634845 DDD:3093;	chr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar			0.435	0.335	1:161510916-161511163	L2c	1:161511571-161511646	L3			1:161479598-161518642	1:161479598-161518642								92.43				0.0515701444991238	-0.213860724130331						146740			yes		8	3.6955e-06	1.2227e-05	-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI and OMIM_morbid, +0.00);2D-1 (FCGR3A,+0.00);3A (1 gene, +0.00);5F (+0.00)	1
1_161511001_161511600_DEL_1	1	161511001	161511600	-599	DEL	NA	split	q23.3	FCGR3A				NM_000569	8	161511548	161519608	52	0	0	no	5	exon5-txEnd	3'UTR	1389	3'	161511548	161511600																										1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095																												92.43				0.0515701444991238	-0.213860724130331	autosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity	AR	Supportive	23006327[PMID]	2214	146740	Immunodeficiency 20, 615707 (3) AR	AR	yes		8	3.6955e-06	1.2227e-05			full=1
1_161511001_161519950_DEL_1	1	161511001	161519950	-8949	DEL	NA	full	q23.3	FCGR3A	HSPA6	FCGR2C	1																ATF6 (morbid/RE=EA_enhancer);MPZ (morbid/RE=EA_enhancer);SDHC (HI=3/morbid/RE=EA_enhancer)															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383	0.00;0.00;0.00;0.01;0.03;0.05	Immunodeficiency 20, 615707 (3) AR		dbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A	1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527	0.01;0.09;0.35;0.12;0.05;0.06;0.15;93.57			1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095			1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915	chr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730			1:161488422-161634845 DDD:3093;chr1:161519612-161593482 dbVar;1:161519613-161593482 esv3587731	chr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar;1:161519613-161593482 1000g			0.435	0.545	1:161510916-161511163	L2c					1:161479598-161518642	1:161518644-161565122								92.43				0.0515701444991238	-0.213860724130331						146740			yes		8	3.6955e-06	1.2227e-05	-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI and OMIM_morbid, +0.00);3A (1 gene, +0.00);5F (+0.00)	1
1_161511001_161519950_DEL_1	1	161511001	161519950	-8949	DEL	NA	split	q23.3	FCGR3A				NM_001127592	2	161511548	161519893	8345	1077	100	no	5	txStart-txEnd	5'UTR-3'UTR			161511548	161519893																										1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095																												92.43				0.0515701444991238	-0.213860724130331	autosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity	AR	Supportive	23006327[PMID]	2214	146740	Immunodeficiency 20, 615707 (3) AR	AR	yes		8	3.6955e-06	1.2227e-05			full=1
1_161512001_161512500_DEL_1	1	161512001	161512500	-499	DEL	NA	full	q23.3	FCGR3A	HSPA6	FCGR2C	1																															dbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506	1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383	0.00;0.00;0.00;0.00;0.00;0.00	Immunodeficiency 20, 615707 (3) AR		dbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A	1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527	0.00;0.00;0.02;0.01;0.00;0.00;0.01;5.57			1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095			1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915	chr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730			1:161488422-161634845 DDD:3093;	chr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar			0.490	0.360							1:161479598-161518642	1:161479598-161518642								92.43				0.0515701444991238	-0.213860724130331						146740			yes		8	3.6955e-06	1.2227e-05	-1.0	1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI and OMIM_morbid, +0.00);2D-1 (FCGR3A,+0.00);3A (1 gene, +0.00);5F (+0.00)	1
1_161512001_161512500_DEL_1	1	161512001	161512500	-499	DEL	NA	split	q23.3	FCGR3A				NM_000569	8	161511548	161519608	500	0	0	no	5	exon5-exon5	3'UTR	489	3'	161512000	161512500																										1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915	chr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576	0.1000	DDD:3093;dbVar	chr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959	0.0769				IMH	1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701	0.3095																												92.43				0.0515701444991238	-0.213860724130331	autosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity	AR	Supportive	23006327[PMID]	2214	146740	Immunodeficiency 20, 615707 (3) AR	AR	yes		8	3.6955e-06	1.2227e-05			full=1


================================================
FILE: tests/AnnotSV/test_04_ExternalBEDannotationFiles/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

# Check the use of an external BED file (provided by the user)
##############################################################
#
# User_BED_file_1 = ./input/user_FtIncludedInSV.bed
# User_BED_file_2 = ./input/user_SVincludedInFt.bed


User_BED_file_1="./input/user_FtIncludedInSV.bed"
User_BED_file_2="./input/user_SVincludedInFt.bed"


cp "$User_BED_file_1" $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/FtIncludedInSV/
cp "$User_BED_file_2" $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/SVincludedInFt

mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv" "./output/output.log"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtBEDcol 5 -overlap 70 -genomeBuild GRCh37 &> "./output/output.log"


# Validation of the use of "User_BED_file_1"
############################################
if [ `grep -c "AAAAAAAAAAAAAAAAAAAA" "./output/output.log"` == 2 ] && [ `grep -c "FtIncludedInSV" "./output/output.log"` == 1 ]
then
	echo "Ok"
else
        echo "error 1: $User_BED_file_1 not used!"
        exit 1
fi

# Validation of the use of "User_BED_file_2"
############################################
if [ `grep -c "BBBBBBBBBBBBBBBBBBBB" "./output/output.log"` == 2 ] && [ `grep -c "SVincludedInFt" "./output/output.log"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: $User_BED_file_2 not used!"
        exit 1
fi


# The output columns should have "SVincludedInFt" and "FtIncludedInSV" annotations
##################################################################################
annotations=`$cut "./output/test_tcl.annotated.tsv" "BBBBBBBBBBBBBBBBBBBB"`
if [ `echo $annotations | tr " " "\n" | grep -c "SVincludedInFt"` == 9 ]
then
        echo "Ok"
else
        echo "error 1: SVincludedInFt annotations NOT present in the output file "
        exit 1
fi

annotations=`$cut "./output/test_tcl.annotated.tsv" "AAAAAAAAAAAAAAAAAAAA"`
if [ `echo $annotations | tr " " "\n" | grep -c "FtIncludedInSV"` == 2 ]
then
        echo "Ok"
else
        echo "error 1: FtIncludedInSV annotations NOT present in the output file "
        exit 1
fi


# Clean
#######
rm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/FtIncludedInSV/user_FtIncludedInSV.*
rm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/SVincludedInFt/user_SVincludedInFt.*



echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_04_ExternalBEDannotationFiles/input/test.bed
================================================
#chrom	start	end	tutu	SV type
1	2902537	3529849	ii	DEL


================================================
FILE: tests/AnnotSV/test_04_ExternalBEDannotationFiles/input/user_FtIncludedInSV.bed
================================================
#chrom	start	end	AAAAAAAAAAAAAAAAAAAA
1	3002537	3429849	FtIncludedInSV


================================================
FILE: tests/AnnotSV/test_04_ExternalBEDannotationFiles/input/user_SVincludedInFt.bed
================================================
#chrom	start	end	BBBBBBBBBBBBBBBBBBBB
1	1902537	4529849	SVincludedInFt


================================================
FILE: tests/AnnotSV/test_05_BEDwithoutHeader/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


# Check input BED file with header
##################################
# more input/test.bed
# ---------------------------------------------
# #chrom  start   end     tutu    SV type
# 1       2902537 3529849 ii      DEL
# ---------------------------------------------
# => We should have the "tutu" annotation column (extracted from the BED input file)

# Check input BED file without header
#####################################
# 
# more input/test.withoutHeader.bed
# ---------------------------------------------
# 1       2902537 3529849 ii      DEL
# ---------------------------------------------

# output colum names NOT given in the input file:
# => only "SV_type" should be in the output
# => we should not have "tutu" anymore, but "user#1"
# ---------------------------------------------
# user#1
# ii
# ii
# ii
# ii
# ii
# ii
# ii
# ii
# ---------------------------------------------



# Input BED file with header
############################
mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtBEDcol 5 -overlap 70 -genomeBuild GRCh37

# Check if the "tutu" annotation column from the BED file was added
if [ `grep -c "tutu" "./output/test_tcl.annotated.tsv"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: \"tutu\" annotation column from the input BED file NOT added"
        exit 1
fi


# Input BED file without header
###############################
rm -f "./output/test.withoutHeader_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.withoutHeader.bed" -SVinputInfo 1 -outputFile "./output/test.withoutHeader_tcl.annotated.tsv" -svtBEDcol 5 -overlap 70 -genomeBuild GRCh37 

# Check if the "SV_type" annotation column from the BED file was added
if [ `grep -c "SV_type" "./output/test_tcl.annotated.tsv"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: \"SV_type\" annotation column from the input BED file NOT added"
        exit 1
fi


# Check if the "user#1" annotation column from the BED file was added
if [ `grep -c "user#1" "./output/test.withoutHeader_tcl.annotated.tsv"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: \"user#1\" annotation column from the input BED file NOT added"
        exit 1
fi



echo "ok - Finished"





================================================
FILE: tests/AnnotSV/test_05_BEDwithoutHeader/input/test.bed
================================================
#chrom	start	end	tutu	SV type
1	2902537	3529849	ii	DEL


================================================
FILE: tests/AnnotSV/test_05_BEDwithoutHeader/input/test.withoutHeader.bed
================================================
1	2902537	3529849	ii	DEL


================================================
FILE: tests/AnnotSV/test_06_VCFfromLumpy/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}


# Check that no column is shifted
#################################

# Check the number of annotated SV
###################################
# => should be the same in the VCF and in the annotated file

# There are 2 paires of square-bracketed notations in ALT:
# 
# # First SV:
# 1       67452229        166_1   N       [1:67452635[N   353.30  .       SVTYPE=BND;STRANDS=--:33;CIPOS=-2,0;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=166_2;EVENT=166;SU=33;PE=17;SR=16        GT:SU:PE:SR:GQ:
# SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB 1/1:9:5:4:87:0.00:-11,-20,-82:102:93:8:92:7:51:3:0:41:4:0.071   0/1:24:12:12:200:353.30:-44,-9,-59:105:81:23:80:22:41:11:0:39:11:0.22
# 1       67452635        166_2   N       [1:67452229[N   353.30  .       SVTYPE=BND;STRANDS=--:33;CIPOS=-10,9;CIEND=-2,0;CIPOS95=0,0;CIEND95=0,0;MATEID=166_1;EVENT=166;SECONDARY;SU=33;PE=17;SR=16      GT:SU:P
# E:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB 0/0:9:5:4:87:0.00:-11,-20,-82:102:93:8:92:7:51:3:0:41:4:0.071   0/1:24:12:12:200:353.30:-44,-9,-59:105:81:23:80:22:41:11:0:39:11:0.22
# 
# # Second SV:
# 1       186826187       370_1   N       N]1:186826404]  98.88   .       SVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_2;EVENT=370;SU=8;PE=0;SR=8   GT:SU:PE:SR:GQ:SQ:GL:DP
# :RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB 0/0:3:0:3:48:0.00:-5,-10,-39:47:43:3:43:3:43:3:0:0:0:0.065      0/1:5:0:5:71:98.88:-11,-1,-8:18:12:5:12:5:12:5:0:0:0:0.29
# 1       186826404       370_2   N       N]1:186826187]  98.88   .       SVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_1;EVENT=370;SECONDARY;SU=8;PE=0;SR=8 GT:SU:PE:SR:GQ:
# SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB 0/0:3:0:3:48:0.00:-5,-10,-39:47:43:3:43:3:43:3:0:0:0:0.065      0/1:5:0:5:71:98.88:-11,-1,-8:18:12:5:12:5:12:5:0:0:0:0.29




mkdir -p ./output
rm -f "./output/test1_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test1.vcf" -SVinputInfo 0 -outputFile "./output/test1_tcl.annotated.tsv" -genomeBuild GRCh37


# Check that no column is shifted
for v in `$cut "./output/test1_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "error1: Error with Lumpy VCF input file"
                exit 1
        fi
done


# Check the number of annotated SV
nVCF=`grep -v "^#" "./input/test1.vcf" | wc -l`

nTSV=`$cut ."/output/test1_tcl.annotated.tsv" "Annotation_mode" | grep -c "full"`
nUnnanotatedTSV=`wc -l "./output/test1_tcl.unannotated.tsv" | cut -d" " -f 1`
nTSV=`echo $(($nTSV + $nUnnanotatedTSV))`

if [ "$nVCF" != "$nTSV" ]
then
        echo "error 1: not the expected number of annotated SV"
        exit 1
else
	echo "ok - Finished"
fi



================================================
FILE: tests/AnnotSV/test_06_VCFfromLumpy/input/test.DEL.DUP.vcf
================================================
##fileformat=VCFv4.2
##source=LUMPY
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=STRANDS,Number=.,Type=String,Description="Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description="Confidence interval (95%) around POS for imprecise variants">
##INFO=<ID=CIEND95,Number=2,Type=Integer,Description="Confidence interval (95%) around END for imprecise variants">
##INFO=<ID=MATEID,Number=.,Type=String,Description="ID of mate breakends">
##INFO=<ID=EVENT,Number=1,Type=String,Description="ID of event associated to breakend">
##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description="Secondary breakend in a multi-line variants">
##INFO=<ID=SU,Number=.,Type=Integer,Description="Number of pieces of evidence supporting the variant across all samples">
##INFO=<ID=PE,Number=.,Type=Integer,Description="Number of paired-end reads supporting the variant across all samples">
##INFO=<ID=SR,Number=.,Type=Integer,Description="Number of split reads supporting the variant across all samples">
##INFO=<ID=BD,Number=.,Type=Integer,Description="Amount of BED evidence supporting the variant across all samples">
##INFO=<ID=EV,Number=.,Type=String,Description="Type of LUMPY evidence contributing to the variant call">
##INFO=<ID=PRPOS,Number=.,Type=String,Description="LUMPY probability curve of the POS breakend">
##INFO=<ID=PREND,Number=.,Type=String,Description="LUMPY probability curve of the END breakend">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=DUP:TANDEM,Description="Tandem duplication">
##ALT=<ID=INS,Description="Insertion of novel sequence">
##ALT=<ID=CNV,Description="Copy number variable region">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=SU,Number=1,Type=Integer,Description="Number of pieces of evidence supporting the variant">
##FORMAT=<ID=PE,Number=1,Type=Integer,Description="Number of paired-end reads supporting the variant">
##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Number of split reads supporting the variant">
##FORMAT=<ID=BD,Number=1,Type=Integer,Description="Amount of BED evidence supporting the variant">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample1	sample2
##INFO=<ID=STRANDS,Number=.,Type=String,Description="Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=DUP:TANDEM,Description="Tandem duplication">
1	118091051	275	N	<DEL>	311.66	.	SVTYPE=DEL;SVLEN=-207;END=118091258;STRANDS=+-:13;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=13;PE=0;SR=13	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	1/0:4:0:4:33:0.00:-10,-13,-57:74:66:7:65:6:37:3:1:28:1:0.085	0/0:9:0:9:178:311.66:-33,-2,-20:49:32:16:31:15:11:8:1:20:5:0.33
1	182884306	367	N	<DEL>	149.85	.	SVTYPE=DEL;SVLEN=-14;END=182884320;STRANDS=+-:7;CIPOS=-5,4;CIEND=-5,4;CIPOS95=0,0;CIEND95=0,0;SU=7;PE=0;SR=7	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:6:0:6:45:0.00:-0,-5,-15:15:15:0:15:0:15:0:0:0:0:0	0/1:1:0:1:72:149.85:-16,-1,-8:21:13:7:13:7:13:0:6:0:0:0.35
2	27313898	606	N	<DUP>	59.61	.	SVTYPE=DUP;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043	0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13
2	35576937	649	N	<DEL>	68.88	.	SVTYPE=DEL;SVLEN=-27;END=35576964;STRANDS=+-:8;CIPOS=-10,9;CIEND=-9,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:5:0:5:78:0.00:-0,-8,-26:26:26:0:26:0:26:0:0:0:0:0	0/1:3:0:3:68:68.88:-9,-2,-10:18:13:4:13:4:13:0:3:0:0:0.24
2	88429841	756	N	<DEL>	296.20	.	SVTYPE=DEL;SVLEN=-311;END=88430152;STRANDS=+-:15;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=15;PE=0;SR=15	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:6:0:6:0:2.70:-17,-17,-77:103:91:11:90:10:46:7:1:44:2:0.1	0/1:9:0:9:200:293.50:-35,-6,-40:75:56:18:55:17:24:9:3:31:4:0.24
2	129550225	855	N	<DEL>	4.68	.	SVTYPE=DEL;SVLEN=-28;END=129550253;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:4:0:4:96:0.00:-3,-13,-47:53:50:2:50:2:50:1:0:0:0:0.038	0/1:2:0:2:2:4.68:-4,-3,-15:20:17:2:17:2:17:1:0:0:0:0.11
2	224699787	1036	N	<DUP>	53.85	.	SVTYPE=DUP;SVLEN=-10;END=224699797;STRANDS=+-:16;CIPOS=-2,1;CIEND=-2,1;CIPOS95=0,0;CIEND95=0,0;SU=16;PE=0;SR=16	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:13:0:13:42:0.00:-0,-4,-14:14:14:0:14:0:14:0:0:0:0:0	0/1:3:0:3:53:53.85:-8,-3,-14:23:18:4:18:4:18:0:3:0:0:0.18
2	236378717	1068	N	<DEL>	99.30	.	SVTYPE=DEL;SVLEN=-26;END=236378743;STRANDS=+-:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:6:0:6:27:0.01:-0,-3,-9:9:9:0:9:0:9:0:0:0:0:0	0/1:2:0:2:10:99.29:-10,-1,-2:8:3:4:3:4:3:0:3:0:0:0.57
2	241726086	1097	N	<DEL>	26.62	.	SVTYPE=DEL;SVLEN=-33;END=241726119;STRANDS=+-:8;CIPOS=-10,9;CIEND=-1,7;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:6:0:6:102:0.00:-15,-26,-110:135:124:10:124:10:124:5:4:0:0:0.075	0/1:2:0:2:26:26.62:-12,-10,-46:62:54:7:54:7:54:1:5:0:0:0.11
2	242411342	1105	N	<DEL>	137.63	.	SVTYPE=DEL;SVLEN=-180;END=242411522;STRANDS=+-:5;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=5;PE=0;SR=5	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:1:0:1:66:0.00:-6,-13,-52:63:58:4:58:4:58:0:3:0:0:0.065	0/1:4:0:4:137:137.63:-20,-6,-34:55:44:10:44:10:44:3:6:0:0:0.19
3	6162950	1125	N	<DEL>	260.82	.	SVTYPE=DEL;SVLEN=-91;END=6163041;STRANDS=+-:8;CIPOS=-10,8;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:1:0:1:39:0.00:-3,-7,-28:34:31:2:31:2:31:0:1:0:0:0.061	0/1:7:0:7:55:260.82:-27,-1,-6:24:12:11:12:11:12:6:4:0:0:0.48
3	7905948	1132	N	<DEL>	362.44	.	SVTYPE=DEL;SVLEN=-202;END=7906150;STRANDS=+-:9;CIPOS=-4,3;CIEND=-4,3;CIPOS95=0,0;CIEND95=0,0;SU=9;PE=0;SR=9	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:2:0:2:114:0.00:-4,-16,-60:71:66:4:65:3:35:1:0:30:1:0.044	0/1:7:0:7:200:362.44:-42,-5,-41:82:60:21:59:20:29:6:5:30:8:0.25
3	26450970	1166	N	<DEL>	563.52	.	SVTYPE=DEL;SVLEN=-1328;END=26452298;STRANDS=+-:29;CIPOS=-2,1;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=29;PE=14;SR=15	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:4:2:2:123:0.00:-4,-17,-63:74:69:4:68:3:39:1:0:29:1:0.042	0/1:25:12:13:194:563.52:-58,-1,-21:65:38:26:37:25:19:12:1:18:11:0.4


================================================
FILE: tests/AnnotSV/test_06_VCFfromLumpy/input/test1.csv
================================================
id,start_chrom,start,end_chrom,end,ref,alt,length,brackets,type_inferred
166_1,1,67452229,1,67452635,N,[1:67452635[N,406,[N,INV
275,1,118091051,1,118091258,N,<DEL>,207,N[,DEL
367,1,182884306,1,182884320,N,<DEL>,14,N[,DEL
370_1,1,186826187,1,186826404,N,N]1:186826404],217,N],INV
606,2,27313898,2,27314025,N,<DEL>,127,N[,DEL
649,2,35576937,2,35576964,N,<DEL>,27,N[,DEL
756,2,88429841,2,88430152,N,<DEL>,311,N[,DEL
855,2,129550225,2,129550253,N,<DEL>,28,N[,DEL
1036,2,224699787,2,224699797,N,<DEL>,10,N[,DEL
1068,2,236378717,2,236378743,N,<DEL>,26,N[,DEL
1097,2,241726086,2,241726119,N,<DEL>,33,N[,DEL
1105,2,242411342,2,242411522,N,<DEL>,180,N[,DEL
1125,3,6162950,3,6163041,N,<DEL>,91,N[,DEL
1132,3,7905948,3,7906150,N,<DEL>,202,N[,DEL
1166,3,26450970,3,26452298,N,<DEL>,1328,N[,DEL


================================================
FILE: tests/AnnotSV/test_06_VCFfromLumpy/input/test1.vcf
================================================
##fileformat=VCFv4.2
##source=LUMPY
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=STRANDS,Number=.,Type=String,Description="Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description="Confidence interval (95%) around POS for imprecise variants">
##INFO=<ID=CIEND95,Number=2,Type=Integer,Description="Confidence interval (95%) around END for imprecise variants">
##INFO=<ID=MATEID,Number=.,Type=String,Description="ID of mate breakends">
##INFO=<ID=EVENT,Number=1,Type=String,Description="ID of event associated to breakend">
##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description="Secondary breakend in a multi-line variants">
##INFO=<ID=SU,Number=.,Type=Integer,Description="Number of pieces of evidence supporting the variant across all samples">
##INFO=<ID=PE,Number=.,Type=Integer,Description="Number of paired-end reads supporting the variant across all samples">
##INFO=<ID=SR,Number=.,Type=Integer,Description="Number of split reads supporting the variant across all samples">
##INFO=<ID=BD,Number=.,Type=Integer,Description="Amount of BED evidence supporting the variant across all samples">
##INFO=<ID=EV,Number=.,Type=String,Description="Type of LUMPY evidence contributing to the variant call">
##INFO=<ID=PRPOS,Number=.,Type=String,Description="LUMPY probability curve of the POS breakend">
##INFO=<ID=PREND,Number=.,Type=String,Description="LUMPY probability curve of the END breakend">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=DUP:TANDEM,Description="Tandem duplication">
##ALT=<ID=INS,Description="Insertion of novel sequence">
##ALT=<ID=CNV,Description="Copy number variable region">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=SU,Number=1,Type=Integer,Description="Number of pieces of evidence supporting the variant">
##FORMAT=<ID=PE,Number=1,Type=Integer,Description="Number of paired-end reads supporting the variant">
##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Number of split reads supporting the variant">
##FORMAT=<ID=BD,Number=1,Type=Integer,Description="Amount of BED evidence supporting the variant">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample1	sample2
1	67452229	166_1	N	[1:67452635[N	353.30	.	SVTYPE=BND;STRANDS=--:33;CIPOS=-2,0;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=166_2;EVENT=166;SU=33;PE=17;SR=16	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	1/1:9:5:4:87:0.00:-11,-20,-82:102:93:8:92:7:51:3:0:41:4:0.071	0/1:24:12:12:200:353.30:-44,-9,-59:105:81:23:80:22:41:11:0:39:11:0.22
1	67452635	166_2	N	N]1:67452229]	353.30	.	SVTYPE=BND;STRANDS=--:33;CIPOS=-10,9;CIEND=-2,0;CIPOS95=0,0;CIEND95=0,0;MATEID=166_1;EVENT=166;SECONDARY;SU=33;PE=17;SR=16	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:9:5:4:87:0.00:-11,-20,-82:102:93:8:92:7:51:3:0:41:4:0.071	0/1:24:12:12:200:353.30:-44,-9,-59:105:81:23:80:22:41:11:0:39:11:0.22
1	118091051	275	N	<DEL>	311.66	.	SVTYPE=DEL;SVLEN=-207;END=118091258;STRANDS=+-:13;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=13;PE=0;SR=13	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	1/0:4:0:4:33:0.00:-10,-13,-57:74:66:7:65:6:37:3:1:28:1:0.085	0/0:9:0:9:178:311.66:-33,-2,-20:49:32:16:31:15:11:8:1:20:5:0.33
1	182884306	367	N	<DEL>	149.85	.	SVTYPE=DEL;SVLEN=-14;END=182884320;STRANDS=+-:7;CIPOS=-5,4;CIEND=-5,4;CIPOS95=0,0;CIEND95=0,0;SU=7;PE=0;SR=7	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:6:0:6:45:0.00:-0,-5,-15:15:15:0:15:0:15:0:0:0:0:0	0/1:1:0:1:72:149.85:-16,-1,-8:21:13:7:13:7:13:0:6:0:0:0.35
1	186826187	370_1	N	[1:186826404[N	98.88	.	SVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_2;EVENT=370;SU=8;PE=0;SR=8	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:3:0:3:48:0.00:-5,-10,-39:47:43:3:43:3:43:3:0:0:0:0.065	0/1:5:0:5:71:98.88:-11,-1,-8:18:12:5:12:5:12:5:0:0:0:0.29
1	186826404	370_2	N	N]1:186826187]	98.88	.	SVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_1;EVENT=370;SECONDARY;SU=8;PE=0;SR=8	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:3:0:3:48:0.00:-5,-10,-39:47:43:3:43:3:43:3:0:0:0:0.065	0/1:5:0:5:71:98.88:-11,-1,-8:18:12:5:12:5:12:5:0:0:0:0.29
2	27313898	606	N	<DEL>	59.61	.	SVTYPE=DEL;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043	0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13
2	35576937	649	N	<DEL>	68.88	.	SVTYPE=DEL;SVLEN=-27;END=35576964;STRANDS=+-:8;CIPOS=-10,9;CIEND=-9,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:5:0:5:78:0.00:-0,-8,-26:26:26:0:26:0:26:0:0:0:0:0	0/1:3:0:3:68:68.88:-9,-2,-10:18:13:4:13:4:13:0:3:0:0:0.24
2	88429841	756	N	<DEL>	296.20	.	SVTYPE=DEL;SVLEN=-311;END=88430152;STRANDS=+-:15;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=15;PE=0;SR=15	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:6:0:6:0:2.70:-17,-17,-77:103:91:11:90:10:46:7:1:44:2:0.1	0/1:9:0:9:200:293.50:-35,-6,-40:75:56:18:55:17:24:9:3:31:4:0.24
2	129550225	855	N	<DEL>	4.68	.	SVTYPE=DEL;SVLEN=-28;END=129550253;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:4:0:4:96:0.00:-3,-13,-47:53:50:2:50:2:50:1:0:0:0:0.038	0/1:2:0:2:2:4.68:-4,-3,-15:20:17:2:17:2:17:1:0:0:0:0.11
2	224699787	1036	N	<DEL>	53.85	.	SVTYPE=DEL;SVLEN=-10;END=224699797;STRANDS=+-:16;CIPOS=-2,1;CIEND=-2,1;CIPOS95=0,0;CIEND95=0,0;SU=16;PE=0;SR=16	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:13:0:13:42:0.00:-0,-4,-14:14:14:0:14:0:14:0:0:0:0:0	0/1:3:0:3:53:53.85:-8,-3,-14:23:18:4:18:4:18:0:3:0:0:0.18
2	236378717	1068	N	<DEL>	99.30	.	SVTYPE=DEL;SVLEN=-26;END=236378743;STRANDS=+-:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:6:0:6:27:0.01:-0,-3,-9:9:9:0:9:0:9:0:0:0:0:0	0/1:2:0:2:10:99.29:-10,-1,-2:8:3:4:3:4:3:0:3:0:0:0.57
2	241726086	1097	N	<DEL>	26.62	.	SVTYPE=DEL;SVLEN=-33;END=241726119;STRANDS=+-:8;CIPOS=-10,9;CIEND=-1,7;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:6:0:6:102:0.00:-15,-26,-110:135:124:10:124:10:124:5:4:0:0:0.075	0/1:2:0:2:26:26.62:-12,-10,-46:62:54:7:54:7:54:1:5:0:0:0.11
2	242411342	1105	N	<DEL>	137.63	.	SVTYPE=DEL;SVLEN=-180;END=242411522;STRANDS=+-:5;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=5;PE=0;SR=5	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:1:0:1:66:0.00:-6,-13,-52:63:58:4:58:4:58:0:3:0:0:0.065	0/1:4:0:4:137:137.63:-20,-6,-34:55:44:10:44:10:44:3:6:0:0:0.19
3	6162950	1125	N	<DEL>	260.82	.	SVTYPE=DEL;SVLEN=-91;END=6163041;STRANDS=+-:8;CIPOS=-10,8;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:1:0:1:39:0.00:-3,-7,-28:34:31:2:31:2:31:0:1:0:0:0.061	0/1:7:0:7:55:260.82:-27,-1,-6:24:12:11:12:11:12:6:4:0:0:0.48
3	7905948	1132	N	<DEL>	362.44	.	SVTYPE=DEL;SVLEN=-202;END=7906150;STRANDS=+-:9;CIPOS=-4,3;CIEND=-4,3;CIPOS95=0,0;CIEND95=0,0;SU=9;PE=0;SR=9	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:2:0:2:114:0.00:-4,-16,-60:71:66:4:65:3:35:1:0:30:1:0.044	0/1:7:0:7:200:362.44:-42,-5,-41:82:60:21:59:20:29:6:5:30:8:0.25
3	26450970	1166	N	<DEL>	563.52	.	SVTYPE=DEL;SVLEN=-1328;END=26452298;STRANDS=+-:29;CIPOS=-2,1;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=29;PE=14;SR=15	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:4:2:2:123:0.00:-4,-17,-63:74:69:4:68:3:39:1:0:29:1:0.042	0/1:25:12:13:194:563.52:-58,-1,-21:65:38:26:37:25:19:12:1:18:11:0.4


================================================
FILE: tests/AnnotSV/test_07_RegulatoryElement/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail

cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

# Case study 1:
###############

# Fœtus with retrognathia and cleft palate ( HP:0000278; HP:0000175 )
# A 3.2 Mb deletion encompassing known pathogenic ClinGen and OMIM CNV close to SOX9:
# GRCh37, chr17:66426540-69629770 DEL
# - SOX9 gene not overlapped with the SV
# - SOX9 RE overlapped with the SV


# Case study 2:
###############

# Deletion at about 600 kB of MEF2C
# MEF2C (NM_001131005), GRCh38, chr5:88914328-91802402
# - MEF2C not overlapped with the SV
# - MEF2C RE overlapped with the SV


## Check with the SOX9 gene, Exomiser and GRCh37
################################################

mkdir -p ./output
rm -f "./output/delSOX9_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/delSOX9.bed" -hpo "HP:0000278;HP:0000175" -outputFile "./output/delSOX9_tcl.annotated.tsv" -svtBEDcol 4 -REreport 1 -genomeBuild GRCh37

# Check that the "SOX9 RE" is annotated
# SOX9 (HI=3/EX=0.9959/morbid/RE=ABC_enhancer+GH_enhancer)
val=`$cut "./output/delSOX9_tcl.annotated.tsv" "RE_gene"`
if [ `echo $val | egrep -c "SOX9 \(HI=3/EX=0.(7|8|9)"` != 1 ]
then
        echo "error1: The SOX9 RE is not annotated!"
        exit 1
fi

# Check that the "ACMG_class" is "3"
val=`$cut "./output/delSOX9_tcl.annotated.tsv" "ACMG_class"`
if [ `echo $val | grep -c "3"` != 1 ]
then
        echo "error1: The ACMG_class is not set to 3"
        exit 1
fi

# Check if the RE report exists
if [ ! -e "./output/delSOX9_tcl.SV_RE_intersect.report" ] 
then
	echo "error1: The RE report (./output/delSOX9_tcl.SV_RE_intersect.report) was not created"
        exit 1
fi


## Check with the MEF2C gene, without Exomiser, candidateGenesFile and GRCh38
#############################################################################

rm -f "./output/delMEF2C_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/delMEF2C.bed" -outputFile "./output/delMEF2C_tcl.annotated.tsv" -svtBEDcol 4 -REreport 1 -genomeBuild GRCh38 -candidateGenesFile "./input/candidateGenesFile.txt"

# Check that the "MEF2C RE" is annotated
val=`$cut "./output/delMEF2C_tcl.annotated.tsv" "RE_gene"`
# ;MEF2C (HI=3/morbid/candidate/RE=EA_enhancer+GH_enhancer);
if [ `echo $val | egrep -c ";MEF2C \([^)]*GH_enhancer"` != 1 ]
then
        echo "error1: The MEF2C RE is not annotated!"
        exit 1
fi

# Check that the "ACMG_class" is "5"
val=`$cut ./output/delMEF2C_tcl.annotated.tsv "ACMG_class"`
if [ `echo $val | grep -c "5"` != 1 ]
then
        echo "error1: The ACMG_class is not set to 5"
        exit 1
fi

# Check if the RE report exists
if [ ! -e "./output/delMEF2C_tcl.SV_RE_intersect.report" ]
then
        echo "error1: The RE report (./output/delMEF2C_tcl.SV_RE_intersect.report) was not created"
        exit 1
fi


echo "ok - Finished"






================================================
FILE: tests/AnnotSV/test_07_RegulatoryElement/input/candidateGenesFile.txt
================================================
CETN3 MEF2C


================================================
FILE: tests/AnnotSV/test_07_RegulatoryElement/input/delMEF2C.bed
================================================
5	88914328	91802402	DEL


================================================
FILE: tests/AnnotSV/test_07_RegulatoryElement/input/delSOX9.bed
================================================
chr17	68912390	69629770	DEL


================================================
FILE: tests/AnnotSV/test_08_largeSV/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}


# Test with a large SV (105 Mb)
###############################
# (overlapping too many TAD boundaries => previously, caused a bug in excel display (split the line with a "\n")
# chr1:2806107-107058351

mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtBEDcol 6 -genomeBuild GRCh37


# Check that no column is shifted
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "error1: Error with Large SV. Columns shifted."
                exit 1
        fi
done


echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_08_largeSV/input/test.bed
================================================
1	2806107	107058351	104252245	M	DEL	238169240	57	25


================================================
FILE: tests/AnnotSV/test_09_InsertionInAgene/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

# Check the annotation of an insertion in the BBS1 gene:
########################################################
# 11      66278204        66278205        104252245       M        <INS>  M       M       M
 

mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtBEDcol 6 -genomeBuild GRCh37


if [ `$cut "./output/test_tcl.annotated.tsv" "Gene_name" | grep -c BBS1` != 2 ]
then
        echo "error1: Insertion is not annotated in the BBS1 gene."
        exit 1
fi

echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_09_InsertionInAgene/input/test.bed
================================================
11	66278204	66278205	104252245	M	 <INS>	M	M	M


================================================
FILE: tests/AnnotSV/test_10_BadVCFformat/command_Tcl.sh
================================================
#!/bin/bash -x

# The return status of the following AnnotSV command is 2 (failed).
# It's normal and we want to continue the script execution => not using the -e option of pipefail
set -o pipefail



# #################################
# ## 1 - Check d'un VCF sans header
# #################################
# 
# The following error message should be displayed:
# ERROR:
# testVCFwithoutHeader.vcf: no VCF header line (prefixed with "#CHROM"). Check your VCF.
# Exit with error
# 
# 
# #################################################################
# # 2 - Non official format for translocations in an input VCF file
# #################################################################
# 
# # Official VCF format
# #####################
# 
# For TRA, the official description in a VCF is done with BND
# 
# 
# # Bad format example:
# #####################
# 
# # Calling of somatic SV with "novobreak" (analysing data from WGS of cancer)
# chr8    1314        N       .       <TRA>   60      PASS    "PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr11;END=870;SVLEN=0"   GT      ./.
# 
# => Translocation from chr8 (1314) to chr11 (870)
# => Start = 1314
# => End = 870
#         start > end, pas sur le même chrom
# 
# => From AnnotSV v 2.2, this non official format is correctly parsed by AnnotSV



# VCF without header:
#####################

mkdir -p ./output
rm -f "./output/testVCFwithoutHeader_tcl.annotated.tsv" "./output/testVCFwithoutHeader_tcl.log"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/testVCFwithoutHeader.vcf" -SVinputInfo 1 -outputFile "./output/testVCFwithoutHeader_tcl.annotated.tsv" -svtBEDcol 6 -genomeBuild GRCh37 &> "./output/testVCFwithoutHeader_tcl.log"


if [ `grep -c "no VCF header line" "./output/testVCFwithoutHeader_tcl.log"` != 1 ]
then
        echo "error1: Please check the error message for VCF without header."
        exit 1
fi
echo "VCF without header is correctly checked by AnnotSV."



# Bad TRA VCF format: 
#####################

set -eo pipefail

# All the SV should be annotated
rm -f "./output/testTRA_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/testTRA.vcf" -SVinputInfo 1 -outputFile "./output/testTRA_tcl.annotated.tsv" -genomeBuild GRCh37

nInput=`grep -v "^#" "./input/testTRA.vcf" | wc -l`
nOutput=`grep -v "split" "./output/testTRA_tcl.annotated.tsv" | grep -c full`

if [ $nInput != $nOutput ]
then
        echo "error1: Not all SV from the input file ($nInput) are reported in the output ($nOutput)."
        exit 1		
fi


# All the output lines should have the same length
length=`while read line
do  
	echo  "$line" | tr "\t" "\n" | wc -l  
done < "./output/testTRA_tcl.annotated.tsv" | sort -u | wc -l`

if [ $length != 1 ]
then
	echo "error1: The output lines are not all the same length ($length)"
        exit 1
fi



echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_10_BadVCFformat/input/testTRA.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	s1	s2	s3	s4	s5	s6	s7	s8	s9	s10	s11	s12	s13	s14	s15	s16	s17	s18	s19	s20	s21	s22	s23	s24	s25	s26	s27	s28	s29	s30	
chr1	63705386	N	.	<TRA>	51	PASS	"PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chrX;END=103478444;SVLEN=0"	GT	./.	E450570	contig1	size250	3	cov1.80	14	5	12.4	1	42	16	5	23.8	3	33	14	5	56.4	5	56.4	11	0	0	0	0	6	0	7	0
chr10	24094616	N	.	<TRA>	56	PASS	"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr22;END=29065201;SVLEN=0"	GT	./.	E413112	contig1	size568	12	cov3.17	22	7	13	2	45.5	22	0	0	0	0	20	0	0	0	0	21	0	0	0	0	4	0	11	0
chr10	72262149	N	.	<DEL>	60	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr10;END=72262285;SVLEN=136"	GT	./.	E434477	contig1	size274	4	cov2.17	36	2	60	2	60	29	0	0	0	0	26	3	60	3	60	20	0	0	0	0	215	173	208	173
chr10	75132915	N	.	<DEL>	60	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr10;END=75133073;SVLEN=158"	GT	./.	E55155	contig2	size441	6	cov2.04	20	4	43.5	4	43.5	14	0	0	0	0	13	3	60	3	60	17	0	0	0	0	132	148	140	148
chr10	129333382	N	.	<TRA>	60	PASS	"PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr22;END=29065680;SVLEN=0"	GT	./.	E206132	contig1	size547	13	cov3.56	30	5	60	5	60	24	0	0	0	0	23	1	60	1	60	16	0	0	0	0	7	0	11	0
chr11	2115497	N	.	<DUP>	60	PASS	"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DUP;CHR2=chr11;END=2245835;SVLEN=-130338"	GT	./.	E393307	contig1	size699	9	cov1.93	16	4	60	4	60	37	0	0	0	0	31	9	60	9	60	25	0	0	0	0	9	0	10	0
chr11	47464564	N	.	<DEL>	60	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr11;END=47501857;SVLEN=37293"	GT	./.	E87609	contig1	size457	8	cov2.62	27	8	60	8	60	33	0	0	0	0	16	7	54.14285714	7	54.14285714	27	0	0	0	0	7	0	7	0
chr11	57497816	N	.	<INV>	0	PASS	"PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=INV;CHR2=chr11;END=62150912;SVLEN=4653095"	GT	./.	E475348	contig2	size185	2	cov1.62	18	4	7.5	1	30	9	0	0	0	0	7	6	7.666666667	1	46	13	0	0	0	0	10	0	8	0
chr11	74464541	N	.	<DUP>	60	PASS	"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DUP;CHR2=chr11;END=74550711;SVLEN=-86170"	GT	./.	E46192	contig1	size217	4	cov2.76	30	6	60	6	60	29	0	0	0	0	25	6	60	6	60	21	0	0	0	0	5	0	3	0
chr12	111553901	N	.	<DUP>	60	PASS	"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DUP;CHR2=chr12;END=111763461;SVLEN=-209560"	GT	./.	E8342	contig1	size226	4	cov2.65	19	2	60	2	60	21	0	0	0	0	1	4	60	4	60	0	0	0	0	0	4	0	4	0
chr13	113994377	N	.	<DEL>	60	PASS	"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr13;END=113994728;SVLEN=-351"	GT	./.	E211497	contig1	size368	11	cov4.48	29	6	60	6	60	21	1	60	1	60	23	6	47	5	55.8	16	0	0	0	0	201	145	183	155
chr14	65007997	N	.	<DEL>	22	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr14;END=65008106;SVLEN=109"	GT	./.	E226228	contig2	size624	7	cov1.68	56	2	15	0	0	18	0	0	0	0	77	14	35.21428571	11	39.18181818	17	0	0	0	0	202	168	201	173
chr15	67419954	N	.	<DEL>	60	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr15;END=67464390;SVLEN=44436"	GT	./.	E103684	contig1	size928	16	cov2.58	24	8	60	8	60	24	0	0	0	0	16	5	60	5	60	19	0	0	0	0	5	0	5	0
chr15	67464564	N	.	<DEL>	60	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr15;END=67760726;SVLEN=296162"	GT	./.	E103684	contig1	size928	16	cov2.58	13	4	60	4	60	22	0	0	0	0	11	5	60	5	60	24	0	0	0	0	5	0	4	0
chr16	2960179	N	.	<DEL>	60	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr16;END=2960312;SVLEN=133"	GT	./.	E259134	contig1	size422	5	cov1.78	23	1	60	1	60	10	0	0	0	0	23	5	51.8	4	60	17	0	0	0	0	171	153	169	160
chr17	61023690	N	.	<DEL>	60	PASS	"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr17;END=61023980;SVLEN=-290"	GT	./.	E454618	contig1	size183	4	cov3.28	21	3	60	3	60	22	0	0	0	0	14	2	57	2	57	14	0	0	0	0	166	167	179	169
chr19	4836003	N	.	<DEL>	60	PASS	"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr19;END=4836266;SVLEN=-263"	GT	./.	E178162	contig1	size236	5	cov3.18	19	5	59.2	5	59.2	15	0	0	0	0	14	6	60	6	60	17	0	0	0	0	158	145	151	147
chr20	14996078	N	.	<DEL>	60	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr20;END=15138778;SVLEN=142700"	GT	./.	E341303	contig3	size248	7	cov4.23	31	6	60	6	60	25	0	0	0	0	25	5	60	5	60	31	0	0	0	0	4	0	4	0
chr21	24253579	N	.	<TRA>	60	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr4;END=57931247;SVLEN=0"	GT	./.	E69492	contig1	size749	15	cov3.00	21	4	60	4	60	34	0	0	0	0	28	5	60	5	60	18	0	0	0	0	5	0	6	0
chr7	112155563	N	.	<DEL>	60	PASS	"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr7;END=112155713;SVLEN=-150"	GT	./.	E437359	contig1	size707	20	cov4.24	22	14	60	14	60	30	0	0	0	0	37	12	57	11	60	26	0	0	0	0	209	193	204	196
chr8	13119175	N	.	<DEL>	60	PASS	"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr8;END=15348431;SVLEN=-2229256"	GT	./.	E349392	contig1	size541	18	cov4.99	27	0	0	0	0	35	0	0	0	0	20	14	60	14	60	21	0	0	0	0	10	0	9	0
chr8	13142009	N	.	<TRA>	60	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr11;END=8708663;SVLEN=0"	GT	./.	E286535	contig1	size935	9	cov1.44	16	4	60	4	60	28	0	0	0	0	21	8	60	8	60	25	0	0	0	0	4	0	6	1
chr8	19258862	N	.	<TRA>	60	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chrX;END=30579234;SVLEN=0"	GT	./.	E475427	contig1	size602	16	cov3.99	17	15	60	15	60	25	0	0	0	0	13	8	60	8	60	12	0	0	0	0	10	0	10	0
chr8	19259046	N	.	<TRA>	60	PASS	"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr11;END=9299530;SVLEN=0"	GT	./.	E143883	contig1	size658	18	cov4.10	27	10	60	10	60	19	0	0	0	0	21	9	60	9	60	28	0	0	0	0	7	0	11	0
chr8	50704271	N	.	<DEL>	60	PASS	"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr8;END=50704386;SVLEN=115"	GT	./.	E368105	contig1	size349	6	cov2.58	12	4	60	4	60	9	0	0	0	0	5	3	60	3	60	10	0	0	0	0	100	124	121	126
chrX	54458403	N	.	<DEL>	60	PASS	"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chrX;END=54458563;SVLEN=-160"	GT	./.	E354802	contig1	size346	5	cov2.16	11	6	60	6	60	5	0	0	0	0	14	5	60	5	60	7	0	0	0	0	77	66	74	54
chrX	103478444	N	.	<TRA>	30	PASS	"PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr1;END=63705386;SVLEN=0"	GT	./.	E423477	contig2	size399	8	cov3.01	14	5	56.4	5	56.4	11	0	0	0	0	14	5	12.4	1	42	16	5	23.8	3	33	7	0	6	0


================================================
FILE: tests/AnnotSV/test_10_BadVCFformat/input/testVCFwithoutHeader.vcf
================================================
1	797179	MantaBND:16:0:1:0:0:0:0	T	[8:245697[T	231	NoPairSupport	SVTYPE=BND;MATEID=MantaBND:16:0:1:0:0:0:1;CIPOS=0,40;HOMLEN=40;HOMSEQ=GATAGATCATTGATAGATGATAGGTAGATAGTAGATAGAT;BND_DEPTH=73;MATE_BND_DEPTH=46;CSQT=1|LINC01128|ENST00000445118|	GT:FT:GQ:PL:PR:SR	0/1:PASS:231:281,0,999:53,0:28,11


================================================
FILE: tests/AnnotSV/test_11_RamTracking/README
================================================
#####################################
## RAM tracking while running AnnotSV
#####################################

# Input files:
##############
-rw-r--r-- 1 geoffroy lgm 1937148 Mar 20  2018 HG00096.chr1.phase3_shapeit2_mvncall_integrated_v5_extra_anno.20130502.genotypes.withoutSV.filtered.vcf
-rw-r--r-- 1 geoffroy lgm  136400 Mar 12  2018 HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed


# Command line:
###############
command_Tcl.tcl >& command_Tcl.log
=> Look at the logfile (no error message?) and report the RAM in this readme



#########
## BILAN:
#########

## AnnotSV v3.5.7 (2026/04/14)
- 473776 ko

## AnnotSV 3.5 (2025/07/17)
- 481472 Ko

## AnnotSV 3.2 (2022/12/13)
- 283884 Ko

## AnnotSV 3.1 (2021/10/26)
- 179724 Ko

## AnnotSV 3.0 (2020/12/18)
- 152804 Ko

## AnnotSV v2.5 (2020/10/12)
- 680 Mb

## AnnotSV v2.4 (2020/07/30)
- 679 Mb

## AnnotSV v2.3 (2019-12-20)
- 679 Mb

## AnnotSV v2.2 (2019/07/08)
- 664 Mb

## AnnotSV v2.1 (2019/04/05)
- 651 Mb

## AnnotSV v1.2 utilise :
- 615 Mb en écrivant les lignes 1 par 1 dans l'output
- 619 Mb en écrivant l'output à la fin




================================================
FILE: tests/AnnotSV/test_11_RamTracking/commandAnnotSV.sh
================================================
#!/bin/bash 

set -eo pipefail

touch "running.flag"

SVinputFile="../test_02_HG00096/input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed"
SNVindelInputFile="./input/HG00096.chr1.phase3_shapeit2_mvncall_integrated_v5_extra_anno.20130502.genotypes.withoutSV.filtered.vcf.gz"

pid=$$
$ANNOTSV/bin/AnnotSV -SVinputFile "$SVinputFile" -SVinputInfo 1 -snvIndelFiles "$SNVindelInputFile" -outputFile ./output/HG00096.SV_tcl.annotated.tsv -genomeBuild GRCh37 &> tutu.$pid.log 

rm -f "running.flag"
rm -f tutu.$pid.log



================================================
FILE: tests/AnnotSV/test_11_RamTracking/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


# Run in background AnnotSV + creation of a flag ("running.flag") during the process
./commandAnnotSV.sh &

# RAM tracking
rm -f ramAnnotSV-*-ram.txt
ramFile="ramAnnotSV-`hostname`-ram.txt"

sleep 1
pid=`ps -ef | grep AnnotSV | grep -v "grep" | grep "bin/AnnotSV" | awk '{print $2}'`
while [ -e running.flag ]
do
	# "rss" = physical memory (Ko) allocated at the moment
	# The last command fails, the "echo" command will run anyway thanks to the "||"
        ps -o rss= -p $pid >> $ramFile ||  echo "End of the while"
        sleep 0.01
done

max=`sort -n $ramFile  | tail -1`
echo "rss = $max Ko"

#rm -f $ramFile


echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_12_SpaceSeparatedBED/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}



# BED = Tab Separated Values (OK) 
#     => Check that no column is shifted
###################################################################
mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/tab-separated.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37 

for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with ./input/test.bed"
                echo "error 1"
                exit 1
        fi
done


# BED = Space separated values (~in place of tabulations) 
#     => BUG 
# (space-separated-input.bed)
###################################################################

# $ANNOTSV/bin/AnnotSV -SVinputFile space-separated-input.bed -SVinputInfo 1 -outputFile ./space-separated-input_tcl.annotated.tsv -svtBEDcol -1 -genomeBuild GRCh37
#
# => plante :
# ----------------------------------------------------------------------------------------------------------------
# -- refGeneAnnotation --
# bedtools intersect -sorted -a ./space-separated-input.formatted.sorted.bed -b /home/geoffroy/analysisOfSV/AnnotSV/AnnotSV_dev/share/AnnotSV/Annotations_Human/RefGene/GRCh37/refGene.sorted.bed -wa -wb > ./space-separ
# ated-input_tcl.annotated.tsv.tmp.tmp
# Error: unable to open file or unable to determine types for file ./space-separated-input.formatted.sorted.bed
# Exit with error
# ----------------------------------------------------------------------------------------------------------------


# The above "set -e" option instructs bash to immediately exit if any command has a non-zero exit status.
# So here, as the "AnnotSV" command fails, the "echo" command will run anyway thanks to the "||"
rm -f "./output/space-separated_tcl.annotated.tsv"
checks=`$ANNOTSV/bin/AnnotSV -SVinputFile "./input/space-separated.bed" -SVinputInfo 1 -outputFile "./output/space-separated_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37 || echo "AnnotSV error"`

# grep -E "motif1|motif2"
if [ `echo $checks | grep -E -c "has non positional records, which are only valid for the groupBy tool|Please ensure that your file is TAB delimited"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: \"non positional records\" error message NOT found"
        exit 1
fi

rm -f space-separated.NA.bed

echo "ok - Finished"




================================================
FILE: tests/AnnotSV/test_12_SpaceSeparatedBED/input/space-separated.NA.bed
================================================
3 595259 660365 DEL 46.6272	NA
3 21802965 21809296 DEL 69.597	NA
4 69375345 69436236 DEL 273.905	NA
5 172662014 172664164 DEL 79.7484	NA
6 32234922 32235385 DEL 93.4138	NA
6 32453238 32575659 DEL 239.412	NA
6 32592200 32599510 DEL 58.3926	NA
6 32611641 32620287 DEL 59.2892	NA
8 39221844 39341915 DEL 106.943	NA
9 41982829 42163261 DEL 160.41	NA
10 16716673 16716743 DEL 118.351	NA
11 18948751 18963684 DEL 54.8421	NA
11 34912059 34932271 DEL 76.9134	NA
11 55371141 55418665 DEL 580.662	NA
13 29958147 29966092 DEL 61.1997	NA
15 94908904 94911022 DEL 56.5386	NA
18 14181341 14281663 DEL 57.593	NA
18 57846945 57850423 DEL 156.604	NA
21 25900944 25905358 DEL 41.3106	NA
X 107834453 107844667 DEL 67.6054	NA
2 47630253 47630532 DUP 45.6116	NA
12 19517583 19573651 DUP 44.5041	NA
20 29811475 31779077 DUP 132.974	NA
X 2699898 3961923 DUP 352.409	NA
X 5462647 18582623 DUP 521.354	NA
X 18622108 23881793 DUP 568.576	NA
X 23968240 25739082 DUP 175.732	NA
X 29887933 31186057 DUP 229.828	NA
X 37812321 58488111 DUP 1027.53	NA
X 61685547 63412292 DUP 46.3037	NA
X 67283798 71684550 DUP 1016.59	NA
X 73034254 74101261 DUP 120.378	NA
X 90394104 92272788 DUP 115.422	NA
X 99226435 104510808 DUP 1048.03	NA
X 106467752 107830554 DUP 171.733	NA
X 107849336 113818583 DUP 992.51	NA
X 114488536 119551558 DUP 357.347	NA
X 121653838 125257614 DUP 784.169	NA
X 126909857 134852105 DUP 1211.31	NA
X 135822540 140050448 DUP 652.738	NA
X 148586564 149731207 DUP 277.733	NA
X 149838814 154854339 DUP 585.13	NA
1 108555222 110372199 DUP 75.4062	NA
8 106573578 108187890 DUP 53.3966	NA
17 57322954 58933809 DUP 25.0266	NA
X 5464341 8503632 DUP 81.9911	NA
X 8509301 9678574 DUP 37.2043	NA
X 9684952 12177644 DUP 51.1819	NA
X 12186486 13252408 DUP 53.2883	NA
X 13266530 18582623 DUP 111.02	NA
X 20629197 22336601 DUP 32.0408	NA
X 22340960 23881793 DUP 88.695	NA
X 23979867 25739082 DUP 27.3431	NA
X 29888592 31186057 DUP 34.4823	NA
X 37831155 44852216 DUP 149.157	NA
X 44879325 47522088 DUP 48.1608	NA
X 47605015 58488111 DUP 73.881	NA
X 67288207 70802621 DUP 66.0776	NA
X 99245141 101782767 DUP 42.1869	NA
X 101821792 104510808 DUP 31.1242	NA
X 107924114 113818583 DUP 70.943	NA
X 114524338 116884103 DUP 60.8436	NA
X 116890099 119551558 DUP 53.5103	NA
X 121659180 125257614 DUP 92.1906	NA
X 126912349 134852105 DUP 112.584	NA
X 135825852 140050448 DUP 85.0456	NA
X 148590033 149731207 DUP 25.4298	NA
X 149844200 154854339 DUP 109.716	NA


================================================
FILE: tests/AnnotSV/test_12_SpaceSeparatedBED/input/space-separated.bed
================================================
#Chrom	Start	End	SV type	Score
3 595259 660365 DEL 46.6272
3 21802965 21809296 DEL 69.597
4 69375345 69436236 DEL 273.905
5 172662014 172664164 DEL 79.7484
6 32234922 32235385 DEL 93.4138
6 32453238 32575659 DEL 239.412
6 32592200 32599510 DEL 58.3926
6 32611641 32620287 DEL 59.2892
8 39221844 39341915 DEL 106.943
9 41982829 42163261 DEL 160.41
10 16716673 16716743 DEL 118.351
11 18948751 18963684 DEL 54.8421
11 34912059 34932271 DEL 76.9134
11 55371141 55418665 DEL 580.662
13 29958147 29966092 DEL 61.1997
15 94908904 94911022 DEL 56.5386
18 14181341 14281663 DEL 57.593
18 57846945 57850423 DEL 156.604
21 25900944 25905358 DEL 41.3106
X 107834453 107844667 DEL 67.6054
2 47630253 47630532 DUP 45.6116
12 19517583 19573651 DUP 44.5041
20 29811475 31779077 DUP 132.974
X 2699898 3961923 DUP 352.409
X 5462647 18582623 DUP 521.354
X 18622108 23881793 DUP 568.576
X 23968240 25739082 DUP 175.732
X 29887933 31186057 DUP 229.828
X 37812321 58488111 DUP 1027.53
X 61685547 63412292 DUP 46.3037
X 67283798 71684550 DUP 1016.59
X 73034254 74101261 DUP 120.378
X 90394104 92272788 DUP 115.422
X 99226435 104510808 DUP 1048.03
X 106467752 107830554 DUP 171.733
X 107849336 113818583 DUP 992.51
X 114488536 119551558 DUP 357.347
X 121653838 125257614 DUP 784.169
X 126909857 134852105 DUP 1211.31
X 135822540 140050448 DUP 652.738
X 148586564 149731207 DUP 277.733
X 149838814 154854339 DUP 585.13
1 108555222 110372199 DUP 75.4062
8 106573578 108187890 DUP 53.3966
17 57322954 58933809 DUP 25.0266
X 5464341 8503632 DUP 81.9911
X 8509301 9678574 DUP 37.2043
X 9684952 12177644 DUP 51.1819
X 12186486 13252408 DUP 53.2883
X 13266530 18582623 DUP 111.02
X 20629197 22336601 DUP 32.0408
X 22340960 23881793 DUP 88.695
X 23979867 25739082 DUP 27.3431
X 29888592 31186057 DUP 34.4823
X 37831155 44852216 DUP 149.157
X 44879325 47522088 DUP 48.1608
X 47605015 58488111 DUP 73.881
X 67288207 70802621 DUP 66.0776
X 99245141 101782767 DUP 42.1869
X 101821792 104510808 DUP 31.1242
X 107924114 113818583 DUP 70.943
X 114524338 116884103 DUP 60.8436
X 116890099 119551558 DUP 53.5103
X 121659180 125257614 DUP 92.1906
X 126912349 134852105 DUP 112.584
X 135825852 140050448 DUP 85.0456
X 148590033 149731207 DUP 25.4298
X 149844200 154854339 DUP 109.716

================================================
FILE: tests/AnnotSV/test_12_SpaceSeparatedBED/input/tab-separated.bed
================================================
# chrom	Start	End	Variant_type	Biologist_annotation	Biologist_ranking
4	71552	9371067	DEL	4p- syndrom	Pathogenic
5	723194	777000	DUP		Benign
7	110276505	110478039	INS		NA
11	66287088	66288847	DEL	BBS1 internal frameshift	Pathogenic
15	34735949	34806953	DEL		Benign
16	1565629	1571297	DUP	IFT140 tandem duplication 	Pathogenic


================================================
FILE: tests/AnnotSV/test_13_txFile/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail

cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


################################
# Check the "-txFile" option
################################

# INFO: Transcript annotation comes from $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed


## Check 1: the CDK11B gene (with a BED input file)
###################################################

# grep CDK11B $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed
# 1       1570602 1590465 -       CDK11B  NM_001291345    1571125 1588935 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1577746,1580486,1586824,1588824,1590374,     1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577362,1577869,1580625,1586938,1588948,1590465,
# 1       1570602 1590465 -       CDK11B  NM_001787       1571125 1588935 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1577707,1580486,1586818,1588824,1590374,     1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577362,1577869,1580625,1586938,1588948,1590465,
# 1       1570602 1590465 -       CDK11B  NM_033486       1571125 1588935 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1577746,1580486,1586818,1588824,1590374,     1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577362,1577869,1580625,1586938,1588948,1590465,
# 1       1570602 1590465 -       CDK11B  NM_033487       1571125 1577348 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1586817,1588824,1590374,        1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577365,1586938,1588948,1590465,
# 1       1570602 1590465 -       CDK11B  NM_033489       1571125 1588714 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1577746,1580486,1586818,1588705,1588824,1590374,     1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577362,1577869,1580625,1586938,1588752,1588948,1590465,
# 1       1570602 1590465 -       CDK11B  NM_033490       1571125 1577849 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1577746,1586817,1588824,1590374,    1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577362,1577871,1586938,1588948,1590465,

# By default, the CDK11B gene is annotated with the "NM_001787" transcript (and not the "NM_033486")
mkdir -p ./output
rm -f "./output/test.check1_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.check1.bed" -outputFile "./output/test.check1_tcl.annotated.tsv" -svtBEDcol 5 -genomeBuild GRCh37
annotations=`$cut "./output/test.check1_tcl.annotated.tsv" "Gene_name;Tx" | grep "CDK11B"`
if [ `echo $annotations | grep -c "NM_001787"` != 0 ]
then
        echo "Ok"
else
        echo "error 1: the CDK11B gene is not annotated with the NM_001787 transcript"
        exit 1
fi


# Changing of the transcript default:
# => "NM_033486" transcript is given in the "txFile.check1.txt" file
rm -f "./output/test.check1.WithTx_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.check1.bed" -outputFile "./output/test.check1.WithTx_tcl.annotated.tsv" -svtBEDcol 5 -txFile "./input/txFile.check1.txt" -genomeBuild GRCh37
annotations=`$cut "./output/test.check1.WithTx_tcl.annotated.tsv" "Gene_name;Tx" | grep "CDK11B"`
#=> Now, the CDK11B gene is annotated with "NM_033486"
if [ `echo $annotations | grep -c "NM_033486"` != 0 ]
then
        echo "Ok"
else
        echo "error 1: the CDK11B gene is not annotated with the NM_033486 transcript"
        exit 1
fi


## Check 2: the NAV1 gene (with a VCF input file)
#################################################

# grep NAV1 $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed
# 1       201508254       201796097       +       NAV1    NM_001389615    201592012       201789060       201508254,201557666,201591980,201598531,201617761,201681944,201687517,201749548,201750139,201751303,201752533,201754437,201755556,201758867,201759816,201762919,201763593,201772720,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,       201508470,201557777,201592734,201598635,201618553,201682047,201687883,201749687,201750437,201751997,201752980,201754479,201755705,201758920,201759894,201763003,201763705,201772842,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,
# 1       201508254       201796097       +       NAV1    NM_001389616    201592012       201789060       201508254,201591980,201598531,201617761,201681944,201687517,201749548,201750139,201751303,201752533,201754437,201755556,201758867,201759681,201759816,201762919,201763593,201772720,201773616,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964, 201508470,201592734,201598635,201618553,201682047,201687883,201749687,201750437,201751997,201752980,201754479,201755705,201758920,201759705,201759894,201763003,201763705,201772842,201773625,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,
# 1       201508254       201796097       +       NAV1    NM_001389617    201592012       201789060       201508254,201557666,201591980,201598531,201617761,201681944,201687517,201749548,201750139,201751303,201752533,201754437,201755556,201757595,201758867,201759681,201759816,201762919,201763593,201772720,201773616,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,      201508470,201557777,201592734,201598635,201618553,201682047,201687883,201749687,201750437,201751997,201752980,201754479,201755705,201757766,201758920,201759705,201759894,201763003,201763705,201772842,201773625,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,
# 1       201617793       201796097       +       NAV1    NM_020443       201617796       201789060       201617793,201681944,201687517,201749548,201750139,201751303,201752533,201754437,201755556,201757595,201758867,201759681,201759816,201762919,201763593,201772720,201773616,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964, 201618553,201682047,201687883,201749687,201750437,201751997,201752980,201754479,201755705,201757766,201758920,201759705,201759894,201763003,201763705,201772842,201773625,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,
# 1       201709027       201796097       +       NAV1    NM_001167738    201709151       201789060       201709027,201749548,201750139,201751303,201752533,201754437,201755556,201757595,201758867,201759681,201759816,201762919,201763593,201772720,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,       201709204,201749687,201750437,201751997,201752980,201754479,201755705,201757766,201758920,201759705,201759894,201763003,201763705,201772842,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,
# 1       201709027       201796097       +       NAV1    NM_001389611    201709151       201789060       201709027,201749548,201750139,201751303,201752533,201754437,201755556,201757595,201758867,201759681,201759816,201762919,201763593,201772720,201773616,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,     201709204,201749687,201750437,201751997,201752980,201754479,201755705,201757766,201758920,201759705,201759894,201763003,201763705,201772842,201773625,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,
# 1       201709027       201796097       +       NAV1    NM_001389612    201709151       201789060       201709027,201749548,201750139,201751303,201752533,201754437,201755556,201757595,201758867,201759816,201762919,201763593,201772720,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964, 201709204,201749687,201750437,201751997,201752980,201754479,201755705,201757766,201758920,201759894,201763003,201763705,201772842,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,
# 1       201709027       201796097       +       NAV1    NM_001389613    201709151       201789060       201709027,201749548,201750139,201751303,201752533,201754437,201755556,201758867,201759681,201759816,201762919,201763593,201772720,201773616,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,       201709204,201749687,201750437,201751997,201752980,201754479,201755705,201758920,201759705,201759894,201763003,201763705,201772842,201773625,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,
# 1       201709027       201796097       +       NAV1    NM_001389614    201709151       201789060       201709027,201749548,201750139,201751303,201752533,201754437,201755556,201758867,201759816,201762919,201763593,201772720,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,   201709204,201749687,201750437,201751997,201752980,201754479,201755705,201758920,201759894,201763003,201763705,201772842,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,

# By default, the NAV1 gene is annotated with the "NM_001389615" transcript (and not the "NM_001167738")
rm -f "./output/test.check2_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.check2.vcf" -outputFile "./output/test.check2_tcl.annotated.tsv" -genomeBuild GRCh37
annotations=`$cut "./output/test.check2_tcl.annotated.tsv" "Gene_name;Tx" | grep "NAV1"`
if [ `echo $annotations | grep -c "NM_001389615"` != 0 ]
then
        echo "Ok"
else
        echo "error 1: the NAV1 gene is not annotated with the NM_001389615 transcript"
        exit 1
fi


# Changing of the transcript default:
# => "NM_001167738" transcript is given in the "txfile.check2.txt" file
rm -f "./output/test.check2.WithTx_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.check2.vcf" -outputFile "./output/test.check2.WithTx_tcl.annotated.tsv" -txFile "./input/txFile.check2.txt" -genomeBuild GRCh37
annotations=`$cut "./output/test.check2.WithTx_tcl.annotated.tsv" "Gene_name;Tx" | grep "NAV1"`
#=> Now, the NAV1 gene is annotated with "NM_001167738"
if [ `echo $annotations | grep -c "NM_001167738"` != 0 ]
then
        echo "Ok"
else
        echo "error 1: the NAV1 gene is not annotated with the NM_001167738 transcript"
        exit 1
fi



############################
# Check the "-tx" option
############################

## Check 3
##########

# By default, tx="RefSeq"
# Check with tx="ENSEMBL"
rm -f "./output/test.check3_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.check1.bed" -outputFile "./output/test.check3_tcl.annotated.tsv" -svtBEDcol 5 -tx "ENSEMBL" -genomeBuild GRCh37
annotations=`$cut "./output/test.check3_tcl.annotated.tsv" "Gene_name;Tx" | grep "CDK11B"`
if [ `echo $annotations | grep -c "ENST00000407249"` != 0 ]
then
        echo "Ok"
else
        echo "error 1: the CDK11B gene is not annotated with the ENST00000407249 transcript"
        exit 1
fi


# Changing of the transcript default:
# => "ENST00000341832" transcript is given in the "txfile.check3.txt" file
rm -f "./output/test.check3.WithTx_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.check1.bed" -outputFile "./output/test.check3.WithTx_tcl.annotated.tsv" -txFile "./input/txFile.check3.txt" -svtBEDcol 5 -tx "ENSEMBL" -genomeBuild GRCh37
annotations=`$cut "./output/test.check3.WithTx_tcl.annotated.tsv" "Gene_name;Tx" | grep "CDK11B"`
#=> Now, the CDK11B gene is annotated with "ENST00000341832"
if [ `echo $annotations | grep -c "ENST00000341832"` != 0 ]
then
        echo "Ok"
else
        echo "error 1: the CDK11B gene is not annotated with the ENST00000341832 transcript"
        exit 1
fi




echo "ok - Finished"









================================================
FILE: tests/AnnotSV/test_13_txFile/input/test.check1.bed
================================================
#chrom	start	end	score	SV type
1	1490001	1530001	0222	DUP
1	1570602	1585465	DEL
1	94190001	95198431	0.001	DUP


================================================
FILE: tests/AnnotSV/test_13_txFile/input/test.check2.vcf
================================================
##fileformat=VCFv4.2
##ALT=<ID=INV,Description="Inversion">
##FILTER=<ID=ASSEMBLY_ONLY,Description="Variant is supported only by assembly evidence.">
##FILTER=<ID=ASSEMBLY_TOO_FEW_READ,Description="Not enough reads contribute to this assembly as specified by 'assembly.minReads'">
##FILTER=<ID=ASSEMBLY_TOO_SHORT,Description="This assembly is shorter than a read length">
##FILTER=<ID=INSUFFICIENT_SUPPORT,Description="Does not reach the required threshold quality for calling as specified by 'variantcalling.minScore'">
##FILTER=<ID=LOW_QUAL,Description="Low quality call as specified by 'variantcalling.lowQuality'">
##FILTER=<ID=NO_ASSEMBLY,Description="No assembly supporting this variant could be found.">
##FILTER=<ID=REF,Description="Breakpoint corresponds to reference allele">
##FILTER=<ID=SINGLE_ASSEMBLY,Description="Only one side of the breakpoint could be assembled.">
##FILTER=<ID=SINGLE_SUPPORT,Description="Supported by fewer than 'variantcalling.minReads' fragments">
##FILTER=<ID=SMALL_EVENT,Description="Event size is smaller than the minimum reportable size specified by 'variantcalling.minSize'">
##FORMAT=<ID=ASQ,Number=1,Type=Float,Description="Pro-rata quality score contribution of assemblies supporting breakpoint">
##FORMAT=<ID=ASRP,Number=1,Type=Integer,Description="Count of read pairs incorporated into any breakpoint assembly">
##FORMAT=<ID=ASSR,Number=1,Type=Integer,Description="Count of split, soft clipped or indel-containing reads incorporated into any breakpoint assemblies">
##FORMAT=<ID=BANRP,Number=1,Type=Integer,Description="Count of read pairs at this breakend assembled into a contig that does not support the breakpoint.">
##FORMAT=<ID=BANRPQ,Number=1,Type=Float,Description="Quality score of read pairs at this breakend assembled into a contig that does not support the breakpoint.">
##FORMAT=<ID=BANSR,Number=1,Type=Integer,Description="Count of split reads at this breakend assembled into a contig that does not support the breakpoint.">
##FORMAT=<ID=BANSRQ,Number=1,Type=Float,Description="Quality score of split reads at this breakend assembled into a contig that does not support the breakpoint.">
##FORMAT=<ID=BAQ,Number=1,Type=Float,Description="Pro-rata quality score contribution of assemblies supporting just local breakend">
##FORMAT=<ID=BASRP,Number=1,Type=Integer,Description="Count of read pairs incorporated into any breakend assembly">
##FORMAT=<ID=BASSR,Number=1,Type=Integer,Description="Count of split, soft clipped or indel-containing reads incorporated into any breakend assemblies">
##FORMAT=<ID=BQ,Number=1,Type=Float,Description="Quality score of breakend evidence after evidence reallocation">
##FORMAT=<ID=BSC,Number=1,Type=Integer,Description="Count of soft clips supporting just local breakend per category">
##FORMAT=<ID=BSCQ,Number=1,Type=Float,Description="Quality score of soft clips supporting just local breakend per category">
##FORMAT=<ID=BUM,Number=1,Type=Integer,Description="Count of read pairs (with one read unmapped) supporting just local breakend per category">
##FORMAT=<ID=BUMQ,Number=1,Type=Float,Description="Quality score of read pairs (with one read unmapped) supporting just local breakend per category">
##FORMAT=<ID=BVF,Number=1,Type=Integer,Description="Count of fragments providing breakend for the variant allele.">
##FORMAT=<ID=CASQ,Number=1,Type=Float,Description="Pro-rata quality score of complex compound breakpoint assemblies supporting breakpoint from elsewhere">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=IC,Number=1,Type=Integer,Description="Count of read indels supporting breakpoint per category">
##FORMAT=<ID=IQ,Number=1,Type=Float,Description="Quality score of read indels supporting breakpoint per category">
##FORMAT=<ID=QUAL,Number=1,Type=Float,Description="Quality score of breakend evidence after evidence reallocation">
##FORMAT=<ID=RASQ,Number=1,Type=Float,Description="Pro-rata quality score contribution of assemblies supporting breakpoint from remote breakend">
##FORMAT=<ID=REF,Number=1,Type=Integer,Description="Count of reads mapping across this breakend">
##FORMAT=<ID=REFPAIR,Number=1,Type=Integer,Description="Count of reference read pairs spanning this breakpoint supporting the reference allele">
##FORMAT=<ID=RF,Number=1,Type=Integer,Description="Reference fragments. Count of fragments supporting the reference allele and not the variant allele.">
##FORMAT=<ID=RP,Number=1,Type=Integer,Description="Count of read pairs supporting breakpoint per category">
##FORMAT=<ID=RPQ,Number=1,Type=Float,Description="Quality score of read pairs supporting breakpoint per category">
##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Count of split reads supporting breakpoint per category">
##FORMAT=<ID=SRQ,Number=1,Type=Float,Description="Quality score of split reads supporting breakpoint per category">
##FORMAT=<ID=VF,Number=1,Type=Integer,Description="Count of fragments suspporting the variant breakpoint allele and not the reference allele.">
##INFO=<ID=AS,Number=1,Type=Integer,Description="Count of assemblies supporting breakpoint">
##INFO=<ID=ASQ,Number=1,Type=Float,Description="Quality score of assemblies supporting breakpoint">
##INFO=<ID=ASRP,Number=1,Type=Integer,Description="Count of read pairs incorporated into any breakpoint assembly">
##INFO=<ID=ASSR,Number=1,Type=Integer,Description="Count of split, soft clipped or indel-containing reads incorporated into any breakpoint assemblies">
##INFO=<ID=BA,Number=1,Type=Integer,Description="Count of assemblies supporting just local breakend">
##INFO=<ID=BANRP,Number=1,Type=Integer,Description="Count of read pairs at this breakend assembled into a contig that does not support the breakpoint.">
##INFO=<ID=BANRPQ,Number=1,Type=Float,Description="Quality score of read pairs at this breakend assembled into a contig that does not support the breakpoint.">
##INFO=<ID=BANSR,Number=1,Type=Integer,Description="Count of split reads at this breakend assembled into a contig that does not support the breakpoint.">
##INFO=<ID=BANSRQ,Number=1,Type=Float,Description="Quality score of split reads at this breakend assembled into a contig that does not support the breakpoint.">
##INFO=<ID=BAQ,Number=1,Type=Float,Description="Quality score of assemblies supporting just local breakend">
##INFO=<ID=BASRP,Number=1,Type=Integer,Description="Count of read pairs incorporated into any breakend assembly">
##INFO=<ID=BASSR,Number=1,Type=Integer,Description="Count of split, soft clipped or indel-containing reads incorporated into any breakend assemblies">
##INFO=<ID=BEALN,Number=.,Type=String,Description="Potential alignment locations of breakend sequence in the format chr:start|strand|cigar|mapq. Depending on the alignment information available, strand and mapq may be empty.">
##INFO=<ID=BEID,Number=.,Type=String,Description="Identifiers of assemblies supporting the variant.">
##INFO=<ID=BEIDH,Number=.,Type=Integer,Description="Remote chimeric alignment offset of corresponding BEID assembly.">
##INFO=<ID=BEIDL,Number=.,Type=Integer,Description="Local chimeric alignment offset of corresponding BEID assembly. ">
##INFO=<ID=BQ,Number=1,Type=Float,Description="Quality score of breakend evidence">
##INFO=<ID=BSC,Number=1,Type=Integer,Description="Count of soft clips supporting just local breakend">
##INFO=<ID=BSCQ,Number=1,Type=Float,Description="Quality score of soft clips supporting just local breakend">
##INFO=<ID=BUM,Number=1,Type=Integer,Description="Count of read pairs (with one read unmapped) supporting just local breakend">
##INFO=<ID=BUMQ,Number=1,Type=Float,Description="Quality score of read pairs (with one read unmapped) supporting just local breakend">
##INFO=<ID=BVF,Number=1,Type=Integer,Description="Count of fragments providing breakend for the variant allele.">
##INFO=<ID=CAS,Number=1,Type=Integer,Description="Count of complex compound breakpoint assemblies supporting breakpoint from elsewhere">
##INFO=<ID=CASQ,Number=1,Type=Float,Description="Quality score of complex compound breakpoint assemblies supporting breakpoint from elsewhere">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=CIRPOS,Number=2,Type=Integer,Description="Confidence interval around remote breakend POS for imprecise variants">
##INFO=<ID=CQ,Number=1,Type=Float,Description="Breakpoint quality score before evidence reallocation">
##INFO=<ID=END,Number=1,Type=Integer,Description="Stop position of the interval">
##INFO=<ID=EVENT,Number=1,Type=String,Description="ID of event associated to breakend">
##INFO=<ID=HOMLEN,Number=.,Type=Integer,Description="Length of base pair identical micro-homology at event breakpoints">
##INFO=<ID=HOMSEQ,Number=.,Type=String,Description="Sequence of base pair identical micro-homology at event breakpoints">
##INFO=<ID=IC,Number=1,Type=Integer,Description="Count of read indels supporting breakpoint">
##INFO=<ID=IHOMPOS,Number=2,Type=Integer,Description="Position of inexact homology">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=IQ,Number=1,Type=Float,Description="Quality score of read indels supporting breakpoint">
##INFO=<ID=PARID,Number=1,Type=String,Description="ID of partner breakend">
##INFO=<ID=RAS,Number=1,Type=Integer,Description="Count of assemblies supporting breakpoint from remote breakend">
##INFO=<ID=RASQ,Number=1,Type=Float,Description="Quality score of assemblies supporting breakpoint from remote breakend">
##INFO=<ID=REF,Number=1,Type=Integer,Description="Count of reads mapping across this breakend">
##INFO=<ID=REFPAIR,Number=1,Type=Integer,Description="Count of reference read pairs spanning this breakpoint supporting the reference allele">
##INFO=<ID=RF,Number=1,Type=Integer,Description="Reference fragments. Count of fragments suspporting the reference allele and not the variant allele.">
##INFO=<ID=RP,Number=1,Type=Integer,Description="Count of read pairs supporting breakpoint">
##INFO=<ID=RPQ,Number=1,Type=Float,Description="Quality score of read pairs supporting breakpoint">
##INFO=<ID=RSI,Number=.,Type=Integer,Description="Support interval offsets of partner breakend.">
##INFO=<ID=SB,Number=1,Type=Float,Description="Strand bias of the reads supporting the variant.1 indicates that reads would be aligned to the positive strand if the reference was changed to the variant allele. 0 indicates that reads bases would be aligned to the negative strand if the reference was changed to the variant allele. Strand bias is calculated purely from supporting reads and exclude read pair support since these are 100% strand bias. Note that reads both directly supporting the variant, and supporting via assembly will be double-counted. Both breakpoint and breakend supporting reads are included.">
##INFO=<ID=SC,Number=1,Type=String,Description="CIGAR for displaying anchoring alignment of any contributing evidence and microhomologies.">
##INFO=<ID=SELF,Number=0,Type=Flag,Description="Indicates a breakpoint is self-intersecting">
##INFO=<ID=SI,Number=.,Type=Integer,Description="Support interval offsets from breakend position in which at least one supporting read/read pair/assembly is mapped.">
##INFO=<ID=SR,Number=1,Type=Integer,Description="Count of split reads supporting breakpoint">
##INFO=<ID=SRQ,Number=1,Type=Float,Description="Quality score of split reads supporting breakpoint">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=VF,Number=1,Type=Integer,Description="Count of fragments suspporting the variant breakpoint allele and not the reference allele.">
##contig=<ID=1,length=249250621>
##contig=<ID=2,length=243199373>
##contig=<ID=3,length=198022430>
##contig=<ID=4,length=191154276>
##contig=<ID=5,length=180915260>
##contig=<ID=6,length=171115067>
##contig=<ID=7,length=159138663>
##contig=<ID=8,length=146364022>
##contig=<ID=9,length=141213431>
##contig=<ID=10,length=135534747>
##contig=<ID=11,length=135006516>
##contig=<ID=12,length=133851895>
##contig=<ID=13,length=115169878>
##contig=<ID=14,length=107349540>
##contig=<ID=15,length=102531392>
##contig=<ID=16,length=90354753>
##contig=<ID=17,length=81195210>
##contig=<ID=18,length=78077248>
##contig=<ID=19,length=59128983>
##contig=<ID=20,length=63025520>
##contig=<ID=21,length=48129895>
##contig=<ID=22,length=51304566>
##contig=<ID=X,length=155270560>
##contig=<ID=Y,length=59373566>
##contig=<ID=MT,length=16569>
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	Germline
1	30859118	gridss3_16b	C	.GCCGAGACTGC	116.66	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=58.33;BASRP=0;BASSR=3;BEID=asm3-14;BEIDH=-1;BEIDL=10;BQ=116.66;BSC=3;BSCQ=58.33;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=116.66;EVENT=gridss3_16;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=36;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:58.33:0:3:116.66:3:58.33:0:0.00:3:0.00:0:0.00:0.00:0.00:36:0:0:0.00:0:0.00:0
1	111494024	gridss11_5o	G	G[1:111494097[	104.86	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.67;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm11-55;BEIDH=2;BEIDL=0;BQ=40.40;BSC=2;BSCQ=40.40;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-39,40;CIRPOS=-16,17;CQ=125.33;EVENT=gridss11_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss11_5h;RAS=0;RASQ=0.00;REF=518;REFPAIR=26;RP=2;RPQ=42.20;SB=0.5;SC=141M87D1X78N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.67:3:0:0:0.00:0:0.00:0.00:0:0:40.40:2:40.40:0:0.00:2:0.00:0:0.00:104.86:0.00:518:26:2:42.20:0:0.00:3
1	111494097	gridss11_5h	T	]1:111494024]T	104.86	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm11-55;BEIDH=0;BEIDL=2;BQ=19.31;BSC=1;BSCQ=19.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-16,17;CIRPOS=-39,40;CQ=125.33;EVENT=gridss11_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss11_5o;RAS=1;RASQ=62.67;REF=677;REFPAIR=48;RP=2;RPQ=42.20;SB=0.0;SC=1X32N1X193M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:19.31:1:19.31:0:0.00:1:0.00:0:0.00:104.86:62.67:677:48:2:42.20:0:0.00:3
1	111494244	gridss11_8o	G	G[1:111494318[	145.70	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.14;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm11-54;BEIDH=2;BEIDL=0;BQ=47.65;BSC=2;BSCQ=47.65;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-3,3;CQ=145.70;EVENT=gridss11_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss11_8h;RAS=0;RASQ=0.00;REF=632;REFPAIR=42;RP=4;RPQ=83.55;SB=0.5;SC=243M1X63N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.14:3:0:1:21.41:0:0.00:0.00:0:0:47.65:2:47.65:0:0.00:2:0.00:0:0.00:145.70:0.00:632:42:4:83.55:0:0.00:4
1	111494318	gridss11_8h	T	]1:111494244]T	145.70	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm11-54;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-32,32;CQ=145.70;EVENT=gridss11_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss11_8o;RAS=1;RASQ=62.14;REF=660;REFPAIR=57;RP=4;RPQ=83.55;SC=1X5N1X121M79D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:145.70:62.14:660:57:4:83.55:0:0.00:4
1	111494368	gridss11_10o	C	C[1:111494471[	104.61	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.01;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm11-57;BEIDH=2;BEIDL=0;BQ=27.54;BSC=1;BSCQ=27.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-50,51;CIRPOS=-50,51;CQ=126.02;EVENT=gridss11_10;IC=0;IMPRECISE;IQ=0.00;PARID=gridss11_10h;RAS=0;RASQ=0.00;REF=629;REFPAIR=49;RP=2;RPQ=41.60;SB=0.0;SC=122M1X100N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.01:3:0:0:0.00:0:0.00:0.00:0:0:27.54:1:27.54:0:0.00:1:0.00:0:0.00:104.61:0.00:629:49:2:41.60:0:0.00:3
1	111494471	gridss11_10h	C	]1:111494368]C	104.61	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm11-57;BEIDH=0;BEIDL=2;BQ=20.53;BSC=1;BSCQ=20.53;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-50,51;CIRPOS=-50,51;CQ=126.02;EVENT=gridss11_10;IC=0;IMPRECISE;IQ=0.00;PARID=gridss11_10o;RAS=1;RASQ=63.01;REF=446;REFPAIR=30;RP=2;RPQ=41.60;SB=1.0;SC=1X100N1X125M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:20.53:1:20.53:0:0.00:1:0.00:0:0.00:104.61:63.01:446:30:2:41.60:0:0.00:3
1	111494718	gridss11_15o	A	A[1:111494817[	83.10	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.66;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm11-56;BEIDH=2;BEIDL=0;BQ=49.28;BSC=2;BSCQ=49.28;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-35,36;CQ=125.32;EVENT=gridss11_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss11_15h;RAS=0;RASQ=0.00;REF=493;REFPAIR=30;RP=1;RPQ=20.45;SB=0.0;SC=100M1X70N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.66:3:0:0:0.00:0:0.00:0.00:0:0:49.28:2:49.28:0:0.00:2:0.00:0:0.00:83.10:0.00:493:30:1:20.45:0:0.00:3
1	111494817	gridss11_15h	A	]1:111494718]A	83.10	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm11-56;BEIDH=0;BEIDL=2;BQ=19.56;BSC=1;BSCQ=19.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-35,36;CQ=125.32;EVENT=gridss11_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss11_15o;RAS=1;RASQ=62.66;REF=489;REFPAIR=27;RP=1;RPQ=20.45;SB=0.0;SC=1X70N1X151M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:19.56:1:19.56:0:0.00:1:0.00:0:0.00:83.10:62.66:489:27:1:20.45:0:0.00:3
1	201754413	gridss20_57b	T	.GGTCTGCTTCCCCCACCCCAAGGGTCCTAACCCCTATTCCCTAAGTGGGCCCCACTTGCTTTCTCCCCCCCCCT	638.64	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=129.06;BASRP=0;BASSR=5;BEID=asm20-44;BEIDH=-1;BEIDL=73;BQ=638.64;BSC=19;BSCQ=509.58;BUM=0;BUMQ=0.00;BVF=19;CAS=0;CASQ=0.00;CQ=339.20;EVENT=gridss20_57;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=98;REFPAIR=14;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:129.06:0:5:638.64:19:509.58:0:0.00:19:0.00:0:0.00:0.00:0.00:98:14:0:0.00:0:0.00:0
1	202302502	gridss20_3o	A	A[1:202302547[	62.10	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=45.20;BSC=2;BSCQ=45.20;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-36,36;CIRPOS=-7,7;CQ=62.10;EVENT=gridss20_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss20_3h;RAS=0;RASQ=0.00;REF=190;REFPAIR=12;RP=3;RPQ=62.10;SB=0.0;SC=31M61D115M1X71N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:45.20:2:45.20:0:0.00:2:0.00:0:0.00:62.10:0.00:190:12:3:62.10:0:0.00:3
1	202302547	gridss20_3h	C	]1:202302502]C	62.10	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.17;BSC=1;BSCQ=19.17;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-36,36;CQ=62.10;EVENT=gridss20_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss20_3o;RAS=0;RASQ=0.00;REF=187;REFPAIR=13;RP=3;RPQ=62.10;SB=0.0;SC=1X13N1X100M11D182M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.17:1:19.17:0:0.00:1:0.00:0:0.00:62.10:0.00:187:13:3:62.10:0:0.00:3
1	226551879	gridss22_6o	A	A[1:226551959[	62.86	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-32,32;CQ=62.86;EVENT=gridss22_6;IC=0;IMPRECISE;IQ=0.00;PARID=gridss22_6h;RAS=0;RASQ=0.00;REF=445;REFPAIR=27;RP=3;RPQ=62.86;SC=292M1X14N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.86:0.00:445:27:3:62.86:0:0.00:3
1	226551959	gridss22_6h	C	]1:226551879]C	62.86	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=20.10;BSC=1;BSCQ=20.10;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-7,8;CQ=62.86;EVENT=gridss22_6;IC=0;IMPRECISE;IQ=0.00;PARID=gridss22_6o;RAS=0;RASQ=0.00;REF=491;REFPAIR=27;RP=3;RPQ=62.86;SB=1.0;SC=1X63N1X100M18D125M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.10:1:20.10:0:0.00:1:0.00:0:0.00:62.86:0.00:491:27:3:62.86:0:0.00:3
1	226554032	gridss22_9o	A	A[1:226554248[	106.78	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.96;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm22-68;BEIDH=2;BEIDL=0;BQ=44.30;BSC=2;BSCQ=44.30;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-65,66;CIRPOS=-65,66;CQ=106.78;EVENT=gridss22_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss22_9h;RAS=0;RASQ=0.00;REF=340;REFPAIR=18;RP=2;RPQ=42.82;SB=0.0;SC=176M1X130N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.96:3:0:0:0.00:0:0.00:0.00:0:0:44.30:2:44.30:0:0.00:2:0.00:0:0.00:106.78:0.00:340:18:2:42.82:0:0.00:3
1	226554248	gridss22_9h	G	]1:226554032]G	106.78	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm22-68;BEIDH=0;BEIDL=2;BQ=67.81;BSC=3;BSCQ=67.81;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-65,66;CIRPOS=-65,66;CQ=106.78;EVENT=gridss22_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss22_9o;RAS=1;RASQ=63.96;REF=235;REFPAIR=19;RP=2;RPQ=42.82;SB=1.0;SC=1X130N1X162M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.82:0:0.00:0.00:0:0:67.81:3:67.81:0:0.00:3:0.00:0:0.00:106.78:63.96:235:19:2:42.82:0:0.00:3
2	17937034	gridss26_5o	C	C[2:17937141[	165.20	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=82.60;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-81;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-2,3;CQ=165.20;EVENT=gridss26_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_5h;RAS=0;RASQ=0.00;REF=316;REFPAIR=16;RP=4;RPQ=82.60;SC=101M18D183M1X4N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:82.60:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:165.20:0.00:316:16:4:82.60:0:0.00:4
2	17937141	gridss26_5h	C	]2:17937034]C	165.20	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-81;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-2,3;CQ=165.20;EVENT=gridss26_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_5o;RAS=1;RASQ=82.60;REF=187;REFPAIR=23;RP=4;RPQ=82.60;SC=1X4N1X200M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:165.20:82.60:187:23:4:82.60:0:0.00:4
2	17938513	gridss26_402b	C	.AAAATAATCTATATATTGATTAGGGTTTTTTTTTAAACAATTGCATTCTGGTC	1509.93	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=107.15;BASRP=0;BASSR=4;BEID=asm26-343,asm26-344;BEIDH=-1,-1;BEIDL=62,52;BQ=1509.93;BSC=54;BSCQ=1402.79;BUM=0;BUMQ=0.00;BVF=54;CAS=0;CASQ=0.00;CQ=832.65;EVENT=gridss26_402;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=138;REFPAIR=54;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:107.15:0:4:1509.93:54:1402.79:0:0.00:54:0.00:0:0.00:0.00:0.00:138:54:0:0.00:0:0.00:0
2	17940432	gridss26_15o	T	T[2:17940483[	209.93	LOW_QUAL	AS=1;ASQ=104.96;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-128,asm26-414;BEIDH=2,284;BEIDL=0,0;BQ=21.65;BSC=1;BSCQ=21.65;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-12,12;CIRPOS=-12,12;CQ=209.93;EVENT=gridss26_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_15h;RAS=1;RASQ=0.00;REF=376;REFPAIR=14;RP=5;RPQ=104.96;SB=1.0;SC=283M1X23N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.96:5:0:0:0.00:0:0.00:0.00:0:0:21.65:1:21.65:0:0.00:1:0.00:0:0.00:209.93:0.00:376:14:5:104.96:0:0.00:5
2	17940483	gridss26_15h	A	]2:17940432]A	209.93	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-128,asm26-414;BEIDH=0,0;BEIDL=2,284;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,12;CIRPOS=-12,12;CQ=209.93;EVENT=gridss26_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_15o;RAS=1;RASQ=104.96;REF=213;REFPAIR=26;RP=5;RPQ=104.96;SC=1X23N1X246M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:209.93:104.96:213:26:5:104.96:0:0.00:5
2	17940806	gridss26_16o	C	C[2:17940878[	210.90	LOW_QUAL	AS=1;ASQ=105.45;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-129,asm26-416;BEIDH=2,126;BEIDL=0,0;BQ=149.09;BSC=7;BSCQ=149.09;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-28,28;CQ=210.90;EVENT=gridss26_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_16h;RAS=1;RASQ=0.00;REF=260;REFPAIR=26;RP=5;RPQ=105.45;SB=0.14285715;SC=126M16D109M1X55N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.45:5:0:0:0.00:0:0.00:0.00:0:0:149.09:7:149.09:0:0.00:7:0.00:0:0.00:210.90:0.00:260:26:5:105.45:0:0.00:5
2	17940878	gridss26_16h	G	]2:17940806]G	210.90	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=2;BANRPQ=41.71;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-129,asm26-416;BEIDH=0,0;BEIDL=2,126;BQ=153.27;BSC=7;BSCQ=153.27;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-28,28;CQ=210.90;EVENT=gridss26_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_16o;RAS=1;RASQ=105.45;REF=309;REFPAIR=22;RP=5;RPQ=105.45;SB=0.2857143;SC=1X55N1X229M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:2:41.71:0:0.00:0.00:0:0:153.27:7:153.27:0:0.00:7:0.00:0:0.00:210.90:105.45:309:22:5:105.45:0:0.00:5
2	17940985	gridss26_19o	G	G[2:17941123[	252.41	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=146.75;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-127;BEIDH=2;BEIDL=0;BQ=23.94;BSC=1;BSCQ=23.94;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-12,13;CQ=252.41;EVENT=gridss26_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_19h;RAS=0;RASQ=0.00;REF=643;REFPAIR=36;RP=5;RPQ=105.66;SB=0.0;SC=282M1X24N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:146.75:7:0:0:0.00:0:0.00:0.00:0:0:23.94:1:23.94:0:0.00:1:0.00:0:0.00:252.41:0.00:643:36:5:105.66:0:0.00:7
2	17941123	gridss26_19h	T	]2:17940985]T	252.41	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=7;ASSR=0;BA=0;BANRP=5;BANRPQ=105.66;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-127;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-12,13;CQ=252.41;EVENT=gridss26_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_19o;RAS=1;RASQ=146.75;REF=234;REFPAIR=21;RP=5;RPQ=105.66;SC=1X24N1X280M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:7:0:5:105.66:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:252.41:146.75:234:21:5:105.66:0:0.00:7
2	17952488	gridss26_39o	T	T[2:17952621[	148.69	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.46;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-223;BEIDH=2;BEIDL=0;BQ=24.64;BSC=1;BSCQ=24.64;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-29,29;CQ=148.69;EVENT=gridss26_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_39h;RAS=0;RASQ=0.00;REF=364;REFPAIR=18;RP=3;RPQ=64.23;SB=1.0;SC=138M11D100M1X57N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.46:4:0:0:0.00:0:0.00:0.00:0:0:24.64:1:24.64:0:0.00:1:0.00:0:0.00:148.69:0.00:364:18:3:64.23:0:0.00:4
2	17952621	gridss26_39h	C	]2:17952488]C	148.69	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-223;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-29,29;CQ=148.69;EVENT=gridss26_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_39o;RAS=1;RASQ=84.46;REF=124;REFPAIR=16;RP=3;RPQ=64.23;SC=1X57N1X292M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:148.69:84.46:124:16:3:64.23:0:0.00:4
2	17953056	gridss26_491b	A	.ATTTTCTAAAACATGTTTTCTATTTTTGAAAAAAGATTGGGGCTTCTTTATTTTTTTTGGTTTAA	146.01	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=73.01;BASRP=0;BASSR=3;BEID=asm26-466;BEIDH=-1;BEIDL=64;BQ=146.01;BSC=3;BSCQ=73.01;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=146.01;EVENT=gridss26_491;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=125;REFPAIR=15;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:73.01:0:3:146.01:3:73.01:0:0.00:3:0.00:0:0.00:0.00:0.00:125:15:0:0.00:0:0.00:0
2	17959732	gridss26_515b	T	.TACACACATATGTGTGTACATACACACATATGTATGTGTATCTATAT	1160.93	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=568.37;BASRP=0;BASSR=26;BEID=asm26-513;BEIDH=-1;BEIDL=46;BQ=1160.93;BSC=27;BSCQ=592.56;BUM=0;BUMQ=0.00;BVF=25;CAS=0;CASQ=0.00;CQ=1160.93;EVENT=gridss26_515;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=33;REFPAIR=0;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:568.37:0:26:1160.93:27:592.56:0:0.00:25:0.00:0:0.00:0.00:0.00:33:0:0:0.00:0:0.00:0
2	17961935	gridss26_52o	A	A[2:17962027[	167.99	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-271;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=167.99;EVENT=gridss26_52;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_52h;RAS=0;RASQ=0.00;REF=284;REFPAIR=23;RP=4;RPQ=84.00;SC=101M1D199M1X5N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.99:0.00:284:23:4:84.00:0:0.00:4
2	17962027	gridss26_52h	A	]2:17961935]A	167.99	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=2;BANRPQ=42.38;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-271;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=167.99;EVENT=gridss26_52;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_52o;RAS=1;RASQ=84.00;REF=490;REFPAIR=40;RP=4;RPQ=84.00;SC=1X5N1X265M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:2:42.38:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.99:84.00:490:40:4:84.00:0:0.00:4
2	17962188	gridss26_54o	C	C[2:17962294[	63.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-556;BEIDH=143;BEIDL=0;BQ=87.63;BSC=4;BSCQ=87.63;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-82,83;CIRPOS=-10,11;CQ=63.29;EVENT=gridss26_54;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_54h;RAS=1;RASQ=0.00;REF=547;REFPAIR=33;RP=3;RPQ=63.29;SB=0.5;SC=142M1X164N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:87.63:4:87.63:0:0.00:4:0.00:0:0.00:63.29:0.00:547:33:3:63.29:0:0.00:3
2	17962294	gridss26_54h	T	]2:17962188]T	63.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm26-556;BEIDH=0;BEIDL=143;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-82,83;CQ=63.29;EVENT=gridss26_54;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_54o;RAS=0;RASQ=0.00;REF=393;REFPAIR=33;RP=3;RPQ=63.29;SC=1X20N1X100M4D182M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.29:0.00:393:33:3:63.29:0:0.00:3
2	25549002	gridss27_1o	T	T]13:44205011]	54	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-17,0;CIRPOS=-17,0;CQ=54.00;EVENT=gridss27_1;HOMLEN=17;HOMSEQ=TGTGTGTGTGTGTGTGT;IC=0;IHOMPOS=0,15;IQ=0.00;PARID=gridss27_1h;RAS=0;RASQ=0.00;REF=13;REFPAIR=1;RP=0;RPQ=0.00;SB=0.0;SC=22M1X16N1X;SR=2;SRQ=54.00;SVTYPE=BND;VF=2	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:54.00:0.00:13:1:0:0.00:2:54.00:2
2	29372290	gridss27_86b	T	TTTTTTTGAGTTTAAACCATTTTTTTTCTTTACCTAACTTTTGGTGGGGTGGGGAGAAAAAAAATTGGTTTTAAACCTT.	1080.71	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=513.98;BASRP=0;BASSR=20;BEID=asm27-74;BEIDH=-1;BEIDL=0;BQ=1080.71;BSC=22;BSCQ=566.73;BUM=0;BUMQ=0.00;BVF=22;CAS=0;CASQ=0.00;CQ=1050.52;EVENT=gridss27_86;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=151;REFPAIR=23;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:513.98:0:20:1080.71:22:566.73:0:0.00:22:0.00:0:0.00:0.00:0.00:151:23:0:0.00:0:0.00:0
2	39564894	gridss28_29b	T	.AATAAAAAAAAATTAAATAAAACATTAATAGTTATAATTATAATTTAATCATTGACCCTGTTCTTT	1289.89	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=30.00;BASRP=0;BASSR=1;BEID=asm28-17;BEIDH=-1;BEIDL=65;BQ=1289.89;BSC=47;BSCQ=1259.89;BUM=0;BUMQ=0.00;BVF=47;CAS=0;CASQ=0.00;CQ=871.56;EVENT=gridss28_29;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=70;REFPAIR=24;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:30.00:0:1:1289.89:47:1259.89:0:0.00:47:0.00:0:0.00:0.00:0.00:70:24:0:0.00:0:0.00:0
2	39564921	gridss28_10b	T	TTTTTTGAAGGGGGG.	239.96	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=121.10;BASRP=1;BASSR=5;BEID=asm28-6;BEIDH=-1;BEIDL=0;BQ=239.96;BSC=6;BSCQ=118.86;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=220.79;EVENT=gridss28_10;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=62;REFPAIR=8;RP=0;RPQ=0.00;SB=0.72727275;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:121.10:1:5:239.96:6:118.86:0:0.00:7:0.00:0:0.00:0.00:0.00:62:8:0:0.00:0:0.00:0
2	47599027	gridss29_10o	A	A[2:47599068[	166.63	LOW_QUAL	AS=1;ASQ=62.14;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-48,asm29-853;BEIDH=2,115;BEIDL=0,0;BQ=19.17;BSC=1;BSCQ=19.17;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-17,18;CQ=166.63;EVENT=gridss29_10;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_10h;RAS=1;RASQ=0.00;REF=396;REFPAIR=37;RP=5;RPQ=104.49;SB=1.0;SC=101M74D114M1X17N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.14:3:0:0:0.00:0:0.00:0.00:0:0:19.17:1:19.17:0:0.00:1:0.00:0:0.00:166.63:0.00:396:37:5:104.49:0:0.00:5
2	47599068	gridss29_10h	T	]2:47599027]T	166.63	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-48,asm29-853;BEIDH=0,0;BEIDL=2,115;BQ=21.39;BSC=1;BSCQ=21.39;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-17,18;CIRPOS=-9,9;CQ=166.63;EVENT=gridss29_10;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_10o;RAS=1;RASQ=62.14;REF=340;REFPAIR=27;RP=5;RPQ=104.49;SB=0.0;SC=1X34N1X123M27D122M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:21.39:1:21.39:0:0.00:1:0.00:0:0.00:166.63:62.14:340:27:5:104.49:0:0.00:5
2	47612506	gridss29_18o	T	T[2:47612586[	209.74	LOW_QUAL	AS=1;ASQ=104.87;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-102,asm29-924;BEIDH=2,177;BEIDL=0,0;BQ=28.37;BSC=1;BSCQ=28.37;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-26,26;CQ=209.74;EVENT=gridss29_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_18h;RAS=1;RASQ=0.00;REF=410;REFPAIR=21;RP=5;RPQ=104.87;SB=0.0;SC=255M1X51N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.87:5:0:0:0.00:0:0.00:0.00:0:0:28.37:1:28.37:0:0.00:1:0.00:0:0.00:209.74:0.00:410:21:5:104.87:0:0.00:5
2	47612586	gridss29_18h	T	]2:47612506]T	209.74	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-102,asm29-924;BEIDH=0,0;BEIDL=2,177;BQ=81.61;BSC=4;BSCQ=81.61;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-26,26;CQ=209.74;EVENT=gridss29_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_18o;RAS=1;RASQ=104.87;REF=446;REFPAIR=34;RP=5;RPQ=104.87;SB=0.75;SC=1X51N1X212M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:81.61:4:81.61:0:0.00:4:0.00:0:0.00:209.74:104.87:446:34:5:104.87:0:0.00:5
2	47612865	gridss29_299b	T	TGTCAA.	112.05	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=56.03;BASRP=0;BASSR=3;BEID=asm29-91;BEIDH=-1;BEIDL=0;BQ=112.05;BSC=3;BSCQ=56.03;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=112.05;EVENT=gridss29_299;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=303;REFPAIR=25;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:56.03:0:3:112.05:3:56.03:0:0.00:3:0.00:0:0.00:0.00:0.00:303:25:0:0.00:0:0.00:0
2	47631105	gridss29_33o	C	C[2:47631237[	145.63	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.11;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-168;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-25,25;CQ=145.63;EVENT=gridss29_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_33h;RAS=0;RASQ=0.00;REF=68;REFPAIR=5;RP=4;RPQ=83.52;SC=101M13D122M1X70N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.11:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:145.63:0.00:68:5:4:83.52:0:0.00:4
2	47631237	gridss29_33h	C	]2:47631105]C	145.63	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-168;BEIDH=0;BEIDL=2;BQ=37.08;BSC=1;BSCQ=37.08;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-25,25;CIRPOS=-35,36;CQ=145.63;EVENT=gridss29_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_33o;RAS=1;RASQ=62.11;REF=358;REFPAIR=16;RP=4;RPQ=83.52;SB=1.0;SC=1X49N1X140M19D98M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:37.08:1:37.08:0:0.00:1:0.00:0:0.00:145.63:62.11:358:16:4:83.52:0:0.00:4
2	47631449	gridss29_36o	G	G[2:47631549[	64.10	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,23;CIRPOS=-29,29;CQ=64.10;EVENT=gridss29_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_36h;RAS=0;RASQ=0.00;REF=288;REFPAIR=21;RP=3;RPQ=64.10;SC=101M39D122M1X44N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.10:0.00:288:21:3:64.10:0:0.00:3
2	47631549	gridss29_36h	G	]2:47631449]G	64.10	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.56;BSC=1;BSCQ=19.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-22,23;CQ=64.10;EVENT=gridss29_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_36o;RAS=0;RASQ=0.00;REF=283;REFPAIR=18;RP=3;RPQ=64.10;SB=0.0;SC=1X57N1X100M3D149M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.56:1:19.56:0:0.00:1:0.00:0:0.00:64.10:0.00:283:18:3:64.10:0:0.00:3
2	47641563	gridss29_1108b	A	.AAATGGGTATTTGAGCAGACAAAACCCTTAACCCTTTTCAGAGA	142.34	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=48.96;BASRP=0;BASSR=2;BEID=asm29-1033;BEIDH=-1;BEIDL=43;BQ=142.34;BSC=4;BSCQ=93.38;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=142.34;EVENT=gridss29_1108;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=43;REFPAIR=15;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:48.96:0:2:142.34:4:93.38:0:0.00:4:0.00:0:0.00:0.00:0.00:43:15:0:0.00:0:0.00:0
2	47643478	gridss29_41o	T	T[2:47643515[	166.38	LOW_QUAL	AS=1;ASQ=62.59;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1051,asm29-204;BEIDH=140,2;BEIDL=0,0;BQ=20.23;BSC=1;BSCQ=20.23;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-10,10;CIRPOS=-3,4;CQ=166.38;EVENT=gridss29_41;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_41h;RAS=1;RASQ=0.00;REF=464;REFPAIR=26;RP=5;RPQ=103.80;SB=0.0;SC=147M1D139M1X19N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.59:3:0:0:0.00:0:0.00:0.00:0:0:20.23:1:20.23:0:0.00:1:0.00:0:0.00:166.38:0.00:464:26:5:103.80:0:0.00:5
2	47643515	gridss29_41h	T	]2:47643478]T	166.38	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1051,asm29-204;BEIDH=0,0;BEIDL=140,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,4;CIRPOS=-10,10;CQ=166.38;EVENT=gridss29_41;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_41o;RAS=1;RASQ=62.59;REF=477;REFPAIR=32;RP=5;RPQ=103.80;SC=1X6N1X128M32D131M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:166.38:62.59:477:32:5:103.80:0:0.00:5
2	47652989	gridss29_426b	T	TGAGACAG.	151.04	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=75.52;BASRP=0;BASSR=4;BEID=asm29-230;BEIDH=-1;BEIDL=0;BQ=151.04;BSC=4;BSCQ=75.52;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=180.79;EVENT=gridss29_426;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=46;REFPAIR=6;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:75.52:0:4:151.04:4:75.52:0:0.00:4:0.00:0:0.00:0.00:0.00:46:6:0:0.00:0:0.00:0
2	47657852	gridss29_53o	C	C[2:47658099[	127.59	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.80;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-272;BEIDH=2;BEIDL=0;BQ=19.00;BSC=1;BSCQ=19.00;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-1,2;CQ=106.53;EVENT=gridss29_53;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_53h;RAS=0;RASQ=0.00;REF=197;REFPAIR=9;RP=3;RPQ=63.80;SB=1.0;SC=101M81D100M1X24N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.80:3:0:0:0.00:0:0.00:0.00:0:0:19.00:1:19.00:0:0.00:1:0.00:0:0.00:127.59:0.00:197:9:3:63.80:0:0.00:3
2	47657855	gridss29_1183b	T	.GCATTTT	213.35	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=93.70;BASRP=0;BASSR=5;BEID=asm29-1095;BEIDH=-1;BEIDL=6;BQ=213.35;BSC=6;BSCQ=119.65;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=187.40;EVENT=gridss29_1183;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=216;REFPAIR=13;RP=0;RPQ=0.00;SB=0.45454547;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:93.70:0:5:213.35:6:119.65:0:0.00:6:0.00:0:0.00:0.00:0.00:216:13:0:0.00:0:0.00:0
2	47658099	gridss29_53h	C	]2:47657852]C	127.59	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-272;BEIDH=0;BEIDL=2;BQ=38.44;BSC=2;BSCQ=38.44;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-12,13;CQ=106.53;EVENT=gridss29_53;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_53o;RAS=1;RASQ=63.80;REF=459;REFPAIR=38;RP=3;RPQ=63.80;SB=1.0;SC=1X2N1X123M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:38.44:2:38.44:0:0.00:2:0.00:0:0.00:127.59:63.80:459:38:3:63.80:0:0.00:3
2	47659569	gridss29_458b	T	TGTTTTTTAT.	293.62	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=133.40;BASRP=0;BASSR=7;BEID=asm29-275;BEIDH=-1;BEIDL=0;BQ=293.62;BSC=8;BSCQ=160.22;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=266.81;EVENT=gridss29_458;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=110;REFPAIR=21;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:133.40:0:7:293.62:8:160.22:0:0.00:8:0.00:0:0.00:0.00:0.00:110:21:0:0.00:0:0.00:0
2	47662232	gridss29_469b	T	TGATAA.	172.09	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=74.70;BASRP=0;BASSR=4;BEID=asm29-277;BEIDH=-1;BEIDL=0;BQ=172.09;BSC=5;BSCQ=97.39;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=172.09;EVENT=gridss29_469;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=288;REFPAIR=16;RP=0;RPQ=0.00;SB=0.5555556;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:74.70:0:4:172.09:5:97.39:0:0.00:5:0.00:0:0.00:0.00:0.00:288:16:0:0.00:0:0.00:0
2	47672459	gridss29_65o	A	A[2:47672513[	167.19	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.40;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.39;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-338;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-4,5;CQ=167.19;EVENT=gridss29_65;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_65h;RAS=0;RASQ=0.00;REF=550;REFPAIR=28;RP=5;RPQ=104.79;SC=306M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.40:3:0:2:42.39:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.19:0.00:550:28:5:104.79:0:0.00:5
2	47672513	gridss29_65h	T	]2:47672459]T	167.19	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=4;BANRPQ=83.81;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-338;BEIDH=0;BEIDL=2;BQ=49.00;BSC=2;BSCQ=49.00;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=0,1;CQ=167.19;EVENT=gridss29_65;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_65o;RAS=1;RASQ=62.40;REF=367;REFPAIR=43;RP=5;RPQ=104.79;SB=0.0;SC=1X8N1X154M37D107M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:4:83.81:0:0.00:0.00:0:0:49.00:2:49.00:0:0.00:2:0.00:0:0.00:167.19:62.40:367:43:5:104.79:0:0.00:5
2	47672542	gridss29_67o	C	C[2:47672686[	84.15	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.27;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-341;BEIDH=2;BEIDL=0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-23,24;CIRPOS=-23,24;CQ=126.54;EVENT=gridss29_67;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_67h;RAS=0;RASQ=0.00;REF=251;REFPAIR=24;RP=1;RPQ=20.88;SB=0.0;SC=100M1X46N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.27:3:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:84.15:0.00:251:24:1:20.88:0:0.00:3
2	47672686	gridss29_67h	G	]2:47672542]G	84.15	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-341;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-23,24;CIRPOS=-23,24;CQ=126.54;EVENT=gridss29_67;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_67o;RAS=1;RASQ=63.27;REF=211;REFPAIR=17;RP=1;RPQ=20.88;SC=1X46N1X153M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.15:63.27:211:17:1:20.88:0:0.00:3
2	47673613	gridss29_501b	T	TCTTGTTA.	227.68	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=113.84;BASRP=0;BASSR=6;BEID=asm29-313;BEIDH=-1;BEIDL=0;BQ=227.68;BSC=6;BSCQ=113.84;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=227.68;EVENT=gridss29_501;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=78;REFPAIR=7;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:113.84:0:6:227.68:6:113.84:0:0.00:6:0.00:0:0.00:0.00:0.00:78:7:0:0.00:0:0.00:0
2	47679372	gridss29_520b	T	TTTTTTTTTTGAGAC.	164.29	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=82.14;BASRP=0;BASSR=4;BEID=asm29-345;BEIDH=-1;BEIDL=0;BQ=164.29;BSC=4;BSCQ=82.14;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=164.29;EVENT=gridss29_520;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=9;REFPAIR=4;RP=0;RPQ=0.00;SB=0.25;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:82.14:0:4:164.29:4:82.14:0:0.00:4:0.00:0:0.00:0.00:0.00:9:4:0:0.00:0:0.00:0
2	47680820	gridss29_79o	A	A[2:47680866[	167.24	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.62;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-370;BEIDH=2;BEIDL=0;BQ=38.24;BSC=2;BSCQ=38.24;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-16,16;CQ=167.24;EVENT=gridss29_79;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_79h;RAS=0;RASQ=0.00;REF=497;REFPAIR=37;RP=4;RPQ=83.62;SB=1.0;SC=119M51D100M1X31N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.62:4:0:0:0.00:0:0.00:0.00:0:0:38.24:2:38.24:0:0.00:2:0.00:0:0.00:167.24:0.00:497:37:4:83.62:0:0.00:4
2	47680866	gridss29_79h	T	]2:47680820]T	167.24	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-370;BEIDH=0;BEIDL=2;BQ=61.47;BSC=3;BSCQ=61.47;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-16,16;CQ=167.24;EVENT=gridss29_79;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_79o;RAS=1;RASQ=83.62;REF=491;REFPAIR=49;RP=4;RPQ=83.62;SB=1.0;SC=1X31N1X233M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:61.47:3:61.47:0:0.00:3:0.00:0:0.00:167.24:83.62:491:49:4:83.62:0:0.00:4
2	47690222	gridss29_88o	A	A[2:47690293[	208.88	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=104.44;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-413;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=208.88;EVENT=gridss29_88;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_88h;RAS=0;RASQ=0.00;REF=336;REFPAIR=30;RP=5;RPQ=104.44;SC=301M1X5N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.44:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:208.88:0.00:336:30:5:104.44:0:0.00:5
2	47690293	gridss29_88h	G	]2:47690222]G	208.88	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=5;BANRPQ=104.44;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-413;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=208.88;EVENT=gridss29_88;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_88o;RAS=1;RASQ=104.44;REF=363;REFPAIR=17;RP=5;RPQ=104.44;SC=1X5N1X250M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:5:104.44:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:208.88:104.44:363:17:5:104.44:0:0.00:5
2	47690390	gridss29_91o	C	C[2:47690510[	126.76	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.38;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-412;BEIDH=2;BEIDL=0;BQ=104.69;BSC=4;BSCQ=104.69;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-34,34;CQ=126.76;EVENT=gridss29_91;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_91h;RAS=0;RASQ=0.00;REF=402;REFPAIR=26;RP=3;RPQ=63.38;SB=0.25;SC=130M9D100M1X67N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.38:3:0:0:0.00:0:0.00:0.00:0:0:104.69:4:104.69:0:0.00:4:0.00:0:0.00:126.76:0.00:402:26:3:63.38:0:0.00:3
2	47690403	gridss29_579b	T	TCCACGTCCCT.	429.14	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=214.57;BASRP=0;BASSR=11;BEID=asm29-402;BEIDH=-1;BEIDL=0;BQ=429.14;BSC=11;BSCQ=214.57;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=429.14;EVENT=gridss29_579;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=473;REFPAIR=33;RP=0;RPQ=0.00;SB=0.72727275;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:214.57:0:11:429.14:11:214.57:0:0.00:11:0.00:0:0.00:0.00:0.00:473:33:0:0.00:0:0.00:0
2	47690510	gridss29_91h	G	]2:47690390]G	126.76	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-412;BEIDH=0;BEIDL=2;BQ=21.39;BSC=1;BSCQ=21.39;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-34,34;CQ=126.76;EVENT=gridss29_91;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_91o;RAS=1;RASQ=63.38;REF=456;REFPAIR=32;RP=3;RPQ=63.38;SB=1.0;SC=1X67N1X147M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.82:0:0.00:0.00:0:0:21.39:1:21.39:0:0.00:1:0.00:0:0.00:126.76:63.38:456:32:3:63.38:0:0.00:3
2	47692269	gridss29_93o	T	T[2:47692330[	209.05	LOW_QUAL	AS=1;ASQ=83.42;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1272,asm29-421;BEIDH=175,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-28,28;CQ=209.05;EVENT=gridss29_93;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_93h;RAS=1;RASQ=0.00;REF=508;REFPAIR=39;RP=6;RPQ=125.63;SC=265M1X41N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.42:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:209.05:0.00:508:39:6:125.63:0:0.00:6
2	47692330	gridss29_93h	G	]2:47692269]G	209.05	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1272,asm29-421;BEIDH=0,0;BEIDL=175,2;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-21,21;CQ=209.05;EVENT=gridss29_93;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_93o;RAS=1;RASQ=83.42;REF=570;REFPAIR=38;RP=6;RPQ=125.63;SB=1.0;SC=1X55N1X241M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:209.05:83.42:570:38:6:125.63:0:0.00:6
2	47693775	gridss29_96o	T	T[2:47693931[	105.99	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.33;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-445;BEIDH=2;BEIDL=0;BQ=59.43;BSC=2;BSCQ=59.43;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-24,24;CQ=105.99;EVENT=gridss29_96;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_96h;RAS=0;RASQ=0.00;REF=172;REFPAIR=11;RP=2;RPQ=42.66;SB=0.5;SC=101M58D100M1X47N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.33:3:0:0:0.00:0:0.00:0.00:0:0:59.43:2:59.43:0:0.00:2:0.00:0:0.00:105.99:0.00:172:11:2:42.66:0:0.00:3
2	47693931	gridss29_96h	G	]2:47693775]G	105.99	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-445;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-24,24;CQ=105.99;EVENT=gridss29_96;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_96o;RAS=1;RASQ=63.33;REF=232;REFPAIR=13;RP=2;RPQ=42.66;SC=1X47N1X237M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:105.99:63.33:232:13:2:42.66:0:0.00:3
2	47694306	gridss29_603b	T	TTTGGAGACGG.	534.74	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=267.37;BASRP=0;BASSR=14;BEID=asm29-431;BEIDH=-1;BEIDL=0;BQ=534.74;BSC=14;BSCQ=267.37;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=534.74;EVENT=gridss29_603;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=79;REFPAIR=14;RP=0;RPQ=0.00;SB=0.2857143;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:267.37:0:14:534.74:14:267.37:0:0.00:14:0.00:0:0.00:0.00:0.00:79:14:0:0.00:0:0.00:0
2	47696093	gridss29_1336b	T	.CCTTTATTGCTGTGTTTTTTTTTTTCTTGTTTTTTTCTTGTCTTCCTTGAGTTTTATTTCTTTCCTCCTT	262.04	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=117.72;BASRP=0;BASSR=5;BEID=asm29-1289;BEIDH=-1;BEIDL=69;BQ=262.04;BSC=6;BSCQ=144.32;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=222.38;EVENT=gridss29_1336;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=34;REFPAIR=16;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:117.72:0:5:262.04:6:144.32:0:0.00:7:0.00:0:0.00:0.00:0.00:34:16:0:0.00:0:0.00:0
2	47698539	gridss29_104o	A	A[2:47698585[	227.20	LOW_QUAL	AS=1;ASQ=103.24;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1318,asm29-488;BEIDH=264,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-4,4;CQ=227.20;EVENT=gridss29_104;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_104h;RAS=1;RASQ=0.00;REF=537;REFPAIR=36;RP=6;RPQ=123.97;SC=263M1X43N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:103.24:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:227.20:0.00:537:36:6:123.97:0:0.00:6
2	47698585	gridss29_104h	A	]2:47698539]A	227.20	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1318,asm29-488;BEIDH=0,0;BEIDL=264,2;BQ=24.06;BSC=1;BSCQ=24.06;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-22,22;CQ=227.20;EVENT=gridss29_104;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_104o;RAS=1;RASQ=103.24;REF=617;REFPAIR=55;RP=6;RPQ=123.97;SB=0.0;SC=1X7N1X263M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:24.06:1:24.06:0:0.00:1:0.00:0:0.00:227.20:103.24:617:55:6:123.97:0:0.00:6
2	47702436	gridss29_1379b	T	.CCCATTGTTTTATGTAAAAAAAAATAGTTTTGGGGTTTTTT	656.10	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=98.75;BASRP=0;BASSR=4;BEID=asm29-1331;BEIDH=-1;BEIDL=40;BQ=656.10;BSC=23;BSCQ=557.36;BUM=0;BUMQ=0.00;BVF=23;CAS=0;CASQ=0.00;CQ=225.03;EVENT=gridss29_1379;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=226;REFPAIR=39;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:98.75:0:4:656.10:23:557.36:0:0.00:23:0.00:0:0.00:0.00:0.00:226:39:0:0.00:0:0.00:0
2	47702452	gridss29_1386b	T	.AGATAAAAAGATGTTTTACAAAAAAAAAGGAAAAAAACCTTTTTTTTGGGTTGTTTGGGGGTAACTTTTTTTT	1187.79	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=364.88;BASRP=0;BASSR=14;BEID=asm29-1324,asm29-1332;BEIDH=-1,-1;BEIDL=72,60;BQ=1187.79;BSC=32;BSCQ=822.91;BUM=0;BUMQ=0.00;BVF=32;CAS=0;CASQ=0.00;CQ=987.78;EVENT=gridss29_1386;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=188;REFPAIR=33;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:364.88:0:14:1187.79:32:822.91:0:0.00:32:0.00:0:0.00:0.00:0.00:188:33:0:0.00:0:0.00:0
2	47702470	gridss29_639b	T	TTTATTTTGGAGTAGAAAATTTTTT.	490.18	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=150.52;BASRP=0;BASSR=7;BEID=asm29-466;BEIDH=-1;BEIDL=0;BQ=490.18;BSC=15;BSCQ=339.66;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=321.40;EVENT=gridss29_639;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=166;REFPAIR=19;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:150.52:0:7:490.18:15:339.66:0:0.00:15:0.00:0:0.00:0.00:0.00:166:19:0:0.00:0:0.00:0
2	47703932	gridss29_118o	A	A[2:47703975[	165.22	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=61.67;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-532;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-4,4;CQ=165.22;EVENT=gridss29_118;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_118h;RAS=0;RASQ=0.00;REF=335;REFPAIR=31;RP=5;RPQ=103.54;SC=138M5D125M1X38N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:61.67:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:165.22:0.00:335:31:5:103.54:0:0.00:5
2	47703975	gridss29_118h	T	]2:47703932]T	165.22	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-532;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-19,20;CQ=165.22;EVENT=gridss29_118;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_118o;RAS=1;RASQ=61.67;REF=662;REFPAIR=32;RP=5;RPQ=103.54;SC=1X7N1X124M18D157M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:165.22:61.67:662:32:5:103.54:0:0.00:5
2	47706490	gridss29_127o	A	A[2:47706552[	62.66	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.31;BSC=1;BSCQ=19.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-5,5;CQ=62.66;EVENT=gridss29_127;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_127h;RAS=0;RASQ=0.00;REF=484;REFPAIR=39;RP=3;RPQ=62.66;SB=1.0;SC=101M33D109M1X63N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.31:1:19.31:0:0.00:1:0.00:0:0.00:62.66:0.00:484:39:3:62.66:0:0.00:3
2	47706552	gridss29_127h	A	]2:47706490]A	62.66	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=20.84;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-32,32;CQ=62.66;EVENT=gridss29_127;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_127o;RAS=0;RASQ=0.00;REF=544;REFPAIR=41;RP=3;RPQ=62.66;SC=1X9N1X100M19D178M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:20.84:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.66:0.00:544:41:3:62.66:0:0.00:3
2	48027249	gridss29_166o	T	T[2:48027320[	125.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.65;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-745;BEIDH=2;BEIDL=0;BQ=40.76;BSC=2;BSCQ=40.76;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-11,11;CQ=125.29;EVENT=gridss29_166;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_166h;RAS=0;RASQ=0.00;REF=376;REFPAIR=26;RP=3;RPQ=62.65;SB=0.5;SC=153M32D100M1X21N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.65:3:0:0:0.00:0:0.00:0.00:0:0:40.76:2:40.76:0:0.00:2:0.00:0:0.00:125.29:0.00:376:26:3:62.65:0:0.00:3
2	48027320	gridss29_166h	T	]2:48027249]T	125.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-745;BEIDH=0;BEIDL=2;BQ=20.23;BSC=1;BSCQ=20.23;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-11,11;CQ=125.29;EVENT=gridss29_166;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_166o;RAS=1;RASQ=62.65;REF=383;REFPAIR=22;RP=3;RPQ=62.65;SB=1.0;SC=1X21N1X239M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:20.23:1:20.23:0:0.00:1:0.00:0:0.00:125.29:62.65:383:22:3:62.65:0:0.00:3
2	48027939	gridss29_171o	A	A[2:48028041[	168.58	LOW_QUAL	AS=1;ASQ=63.34;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1626,asm29-744;BEIDH=243,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-8,8;CQ=168.58;EVENT=gridss29_171;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_171h;RAS=1;RASQ=0.00;REF=209;REFPAIR=12;RP=5;RPQ=105.25;SC=242M1X64N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.34:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:168.58:0.00:209:12:5:105.25:0:0.00:5
2	48028041	gridss29_171h	T	]2:48027939]T	168.58	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1626,asm29-744;BEIDH=0,0;BEIDL=243,2;BQ=20.23;BSC=1;BSCQ=20.23;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-32,33;CQ=168.58;EVENT=gridss29_171;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_171o;RAS=1;RASQ=63.34;REF=236;REFPAIR=19;RP=5;RPQ=105.25;SB=1.0;SC=1X15N1X173M59D54M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:20.23:1:20.23:0:0.00:1:0.00:0:0.00:168.58:63.34:236:19:5:105.25:0:0.00:5
2	48028123	gridss29_173o	A	A[2:48028247[	63.97	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-34,35;CQ=85.38;EVENT=gridss29_173;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_173h;RAS=0;RASQ=0.00;REF=273;REFPAIR=18;RP=3;RPQ=63.97;SC=217M1X27N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.97:0.00:273:18:3:63.97:0:0.00:3
2	48028247	gridss29_173h	A	]2:48028123]A	63.97	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=30.19;BSC=1;BSCQ=30.19;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-34,35;CIRPOS=-14,14;CQ=85.38;EVENT=gridss29_173;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_173o;RAS=0;RASQ=0.00;REF=445;REFPAIR=25;RP=3;RPQ=63.97;SB=1.0;SC=1X68N1X27D211M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:30.19:1:30.19:0:0.00:1:0.00:0:0.00:63.97:0.00:445:25:3:63.97:0:0.00:3
2	48028501	gridss29_1586b	T	.TTTTTTTTTTTTAACCCCCTTTTTTTTTTTATTCCCTTTTTGTCTTTTTTTTTTTTTTTT	2392.23	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=1071.16;BASRP=0;BASSR=42;BEID=asm29-1582;BEIDH=-1;BEIDL=59;BQ=2392.23;BSC=52;BSCQ=1321.07;BUM=0;BUMQ=0.00;BVF=52;CAS=0;CASQ=0.00;CQ=2315.91;EVENT=gridss29_1586;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=154;REFPAIR=76;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:1071.16:0:42:2392.23:52:1321.07:0:0.00:52:0.00:0:0.00:0.00:0.00:154:76:0:0.00:0:0.00:0
2	48028525	gridss29_837b	T	TTTTAGAGCTTGATTTTACTTTT.	320.53	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=140.56;BASRP=0;BASSR=7;BEID=asm29-693;BEIDH=-1;BEIDL=0;BQ=320.53;BSC=9;BSCQ=179.97;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=281.11;EVENT=gridss29_837;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=81;REFPAIR=16;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:140.56:0:7:320.53:9:179.97:0:0.00:9:0.00:0:0.00:0.00:0.00:81:16:0:0.00:0:0.00:0
2	48030733	gridss29_176o	G	G[2:48030871[	207.81	LOW_QUAL	AS=1;ASQ=103.90;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1697,asm29-743;BEIDH=178,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-9,10;CQ=207.81;EVENT=gridss29_176;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_176h;RAS=1;RASQ=0.00;REF=463;REFPAIR=25;RP=5;RPQ=103.90;SC=101M10D177M1X18N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:103.90:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:207.81:0.00:463:25:5:103.90:0:0.00:5
2	48030871	gridss29_176h	T	]2:48030733]T	207.81	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1697,asm29-743;BEIDH=0,0;BEIDL=178,2;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-9,10;CQ=207.81;EVENT=gridss29_176;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_176o;RAS=1;RASQ=103.90;REF=384;REFPAIR=41;RP=5;RPQ=103.90;SB=1.0;SC=1X18N1X209M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:207.81:103.90:384:41:5:103.90:0:0.00:5
2	48032753	gridss29_882b	T	TTAGGGGAAAATTAATTTTTTTTTTAATTTAGTGAAAATTCCCACATACTCATTCCTGGAAAAAGCCAATTCTTGGGGGC.	530.73	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=164.41;BASRP=0;BASSR=6;BEID=asm29-765;BEIDH=-1;BEIDL=0;BQ=530.73;BSC=13;BSCQ=366.32;BUM=0;BUMQ=0.00;BVF=13;CAS=0;CASQ=0.00;CQ=328.83;EVENT=gridss29_882;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=242;REFPAIR=32;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:164.41:0:6:530.73:13:366.32:0:0.00:13:0.00:0:0.00:0.00:0.00:242:32:0:0.00:0:0.00:0
2	48032880	gridss29_891b	T	TTAAAAAC.	456.58	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=228.29;BASRP=0;BASSR=12;BEID=asm29-763;BEIDH=-1;BEIDL=0;BQ=456.58;BSC=12;BSCQ=228.29;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=436.82;EVENT=gridss29_891;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=202;REFPAIR=33;RP=0;RPQ=0.00;SB=0.16666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:228.29:0:12:456.58:12:228.29:0:0.00:12:0.00:0:0.00:0.00:0.00:202:33:0:0.00:0:0.00:0
2	48033078	gridss29_184o	T	T[2:48033261[	126.92	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.46;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-801;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-13,14;CQ=126.92;EVENT=gridss29_184;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_184h;RAS=0;RASQ=0.00;REF=375;REFPAIR=30;RP=3;RPQ=63.46;SC=96M35D149M1X26N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.46:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.92:0.00:375:30:3:63.46:0:0.00:3
2	48033261	gridss29_184h	T	]2:48033078]T	126.92	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-801;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-13,14;CQ=126.92;EVENT=gridss29_184;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_184o;RAS=1;RASQ=63.46;REF=461;REFPAIR=25;RP=3;RPQ=63.46;SC=1X26N1X150M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.92:63.46:461:25:3:63.46:0:0.00:3
2	48033620	gridss29_190o	C	C[2:48033722[	187.32	LOW_QUAL	AS=1;ASQ=83.44;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1712,asm29-812;BEIDH=104,2;BEIDL=0,0;BQ=50.77;BSC=2;BSCQ=50.77;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-40,40;CQ=187.32;EVENT=gridss29_190;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_190h;RAS=1;RASQ=0.00;REF=453;REFPAIR=38;RP=5;RPQ=103.88;SB=0.5;SC=101M23D167M1X15N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.44:4:0:0:0.00:0:0.00:0.00:0:0:50.77:2:50.77:0:0.00:2:0.00:0:0.00:187.32:0.00:453:38:5:103.88:0:0.00:5
2	48033722	gridss29_190h	A	]2:48033620]A	187.32	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1712,asm29-812;BEIDH=0,0;BEIDL=104,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-40,40;CIRPOS=-8,8;CQ=187.32;EVENT=gridss29_190;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_190o;RAS=1;RASQ=83.44;REF=157;REFPAIR=18;RP=5;RPQ=103.88;SC=1X79N1X163M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:187.32:83.44:157:18:5:103.88:0:0.00:5
2	48033906	gridss29_907b	T	TAATTCTAGGGGTAGTTTACCAGGTTAAAAAGATGAAAACATAAGTGGCTGAATCTGTCCAAATATTTCCGCCT.	352.39	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=103.10;BASRP=0;BASSR=4;BEID=asm29-764;BEIDH=-1;BEIDL=0;BQ=352.39;BSC=9;BSCQ=249.29;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=206.20;EVENT=gridss29_907;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=85;REFPAIR=10;RP=0;RPQ=0.00;SB=0.84615386;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:103.10:0:4:352.39:9:249.29:0:0.00:9:0.00:0:0.00:0.00:0.00:85:10:0:0.00:0:0.00:0
2	48034321	gridss29_192o	T	T[2:48034482[	127.46	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.73;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-803;BEIDH=2;BEIDL=0;BQ=19.17;BSC=1;BSCQ=19.17;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-13,14;CQ=127.46;EVENT=gridss29_192;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_192h;RAS=0;RASQ=0.00;REF=241;REFPAIR=16;RP=3;RPQ=63.73;SB=1.0;SC=106M74D100M1X26N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.73:3:0:0:0.00:0:0.00:0.00:0:0:19.17:1:19.17:0:0.00:1:0.00:0:0.00:127.46:0.00:241:16:3:63.73:0:0.00:3
2	48034482	gridss29_192h	T	]2:48034321]T	127.46	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-803;BEIDH=0;BEIDL=2;BQ=20.74;BSC=1;BSCQ=20.74;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-13,14;CQ=127.46;EVENT=gridss29_192;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_192o;RAS=1;RASQ=63.73;REF=326;REFPAIR=41;RP=3;RPQ=63.73;SB=1.0;SC=1X26N1X158M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:20.74:1:20.74:0:0.00:1:0.00:0:0.00:127.46:63.73:326:41:3:63.73:0:0.00:3
2	58392801	gridss30_76b	T	.GTCACTGTTAGATT	234.18	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=117.09;BASRP=0;BASSR=6;BEID=asm30-68;BEIDH=-1;BEIDL=13;BQ=234.18;BSC=6;BSCQ=117.09;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=234.18;EVENT=gridss30_76;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=132;REFPAIR=1;RP=0;RPQ=0.00;SB=0.8333333;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:117.09:0:6:234.18:6:117.09:0:0.00:6:0.00:0:0.00:0.00:0.00:132:1:0:0.00:0:0.00:0
2	95849362	gridss34_53b	T	.TATAACCTTTTTCTTATTTTATCTCTCTTTACCACAAAGTTTTTTTCTCCCCTGGCCCCCTGCTT	1042.90	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=151.95;BASRP=0;BASSR=6;BEID=asm34-35;BEIDH=-1;BEIDL=64;BQ=1042.90;BSC=34;BSCQ=890.95;BUM=0;BUMQ=0.00;BVF=34;CAS=0;CASQ=0.00;CQ=782.29;EVENT=gridss34_53;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=89;REFPAIR=22;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:151.95:0:6:1042.90:34:890.95:0:0.00:34:0.00:0:0.00:0.00:0.00:89:22:0:0.00:0:0.00:0
2	95849384	gridss34_18b	T	TTTTGGGTCATTGTCTCCTTTTGTCCCCCAGG.	376.52	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=128.29;BASRP=0;BASSR=6;BEID=asm34-7;BEIDH=-1;BEIDL=0;BQ=376.52;BSC=12;BSCQ=248.23;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=275.57;EVENT=gridss34_18;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=80;REFPAIR=10;RP=0;RPQ=0.00;SB=0.9444444;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:128.29:0:6:376.52:12:248.23:0:0.00:12:0.00:0:0.00:0.00:0.00:80:10:0:0.00:0:0.00:0
2	100936380	gridss35_1o	T	T[19:1797962[	53.63	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,0;CIRPOS=0,1;CQ=53.63;EVENT=gridss35_1;HOMLEN=1;HOMSEQ=T;IC=0;IHOMPOS=-1,0;IQ=0.00;PARID=gridss35_1h;RAS=0;RASQ=0.00;REF=251;REFPAIR=18;RP=0;RPQ=0.00;SB=0.0;SC=46M2X;SR=2;SRQ=53.63;SVTYPE=BND;VF=2	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.63:0.00:251:18:0:0.00:2:53.63:2
2	128047677	gridss37_109b	T	TATCTGTGCT.	498.42	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=249.21;BASRP=0;BASSR=13;BEID=asm37-77;BEIDH=-1;BEIDL=0;BQ=498.42;BSC=13;BSCQ=249.21;BUM=0;BUMQ=0.00;BVF=13;CAS=0;CASQ=0.00;CQ=498.42;EVENT=gridss37_109;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=279;REFPAIR=33;RP=0;RPQ=0.00;SB=0.23076923;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:249.21:0:13:498.42:13:249.21:0:0.00:13:0.00:0:0.00:0.00:0.00:279:33:0:0.00:0:0.00:0
2	152320817	gridss40_16o	A	A[2:152320923[	63.34	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-38,38;CIRPOS=-66,67;CQ=63.34;EVENT=gridss40_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_16h;RAS=0;RASQ=0.00;REF=126;REFPAIR=15;RP=3;RPQ=63.34;SC=101M13D117M1X75N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.34:0.00:126:15:3:63.34:0:0.00:3
2	152320923	gridss40_16h	G	]2:152320817]G	63.34	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=94.87;BSC=3;BSCQ=94.87;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-66,67;CIRPOS=-38,38;CQ=63.34;EVENT=gridss40_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_16o;RAS=0;RASQ=0.00;REF=196;REFPAIR=17;RP=3;RPQ=63.34;SB=0.6666667;SC=1X132N1X174M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:94.87:3:94.87:0:0.00:3:0.00:0:0.00:63.34:0.00:196:17:3:63.34:0:0.00:3
2	152321430	gridss40_19o	G	G[2:152321485[	207.72	LOW_QUAL	AS=1;ASQ=103.86;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm40-356,asm40-97;BEIDH=315,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-28,29;CIRPOS=-19,19;CQ=207.72;EVENT=gridss40_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_19h;RAS=1;RASQ=0.00;REF=164;REFPAIR=15;RP=5;RPQ=103.86;SC=314M1X56N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:103.86:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:207.72:0.00:164:15:5:103.86:0:0.00:5
2	152321485	gridss40_19h	A	]2:152321430]A	207.72	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm40-356,asm40-97;BEIDH=0,0;BEIDL=315,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-19,19;CIRPOS=-28,29;CQ=207.72;EVENT=gridss40_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_19o;RAS=1;RASQ=103.86;REF=158;REFPAIR=15;RP=5;RPQ=103.86;SC=1X37N1X269M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:207.72:103.86:158:15:5:103.86:0:0.00:5
2	152333934	gridss40_451b	T	.AAAAACCAGGGGGATTCAGGGTTTTCATGTTGTTTTTT	202.43	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=47.10;BASRP=0;BASSR=2;BEID=asm40-385;BEIDH=-1;BEIDL=37;BQ=202.43;BSC=6;BSCQ=155.32;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=142.81;EVENT=gridss40_451;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=169;REFPAIR=14;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:47.10:0:2:202.43:6:155.32:0:0.00:6:0.00:0:0.00:0.00:0.00:169:14:0:0.00:0:0.00:0
2	152335973	gridss40_42o	T	T[2:152336041[	211.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=105.53;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm40-217;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-31,32;CIRPOS=-14,15;CQ=211.06;EVENT=gridss40_42;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_42h;RAS=0;RASQ=0.00;REF=103;REFPAIR=12;RP=5;RPQ=105.53;SC=244M1X62N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.53:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:211.06:0.00:103:12:5:105.53:0:0.00:6
2	152336041	gridss40_42h	T	]2:152335973]T	211.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=4;BANRPQ=84.12;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm40-217;BEIDH=0;BEIDL=2;BQ=62.71;BSC=3;BSCQ=62.71;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-14,15;CIRPOS=-31,32;CQ=211.06;EVENT=gridss40_42;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_42o;RAS=1;RASQ=105.53;REF=331;REFPAIR=19;RP=5;RPQ=105.53;SB=0.33333334;SC=1X28N1X244M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:4:84.12:0:0.00:0.00:0:0:62.71:3:62.71:0:0.00:3:0.00:0:0.00:211.06:105.53:331:19:5:105.53:0:0.00:6
2	152337490	gridss40_244b	A	AGGACATTTTGTG.	384.92	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=192.46;BASRP=0;BASSR=10;BEID=asm40-176;BEIDH=-1;BEIDL=0;BQ=384.92;BSC=10;BSCQ=192.46;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=384.92;EVENT=gridss40_244;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=221;REFPAIR=14;RP=0;RPQ=0.00;SB=0.2;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:192.46:0:10:384.92:10:192.46:0:0.00:10:0.00:0:0.00:0.00:0.00:221:14:0:0.00:0:0.00:0
2	152337779	gridss40_50o	T	T[2:152338008[	125.47	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.73;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm40-219;BEIDH=2;BEIDL=0;BQ=45.97;BSC=2;BSCQ=45.97;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=104.93;EVENT=gridss40_50;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_50h;RAS=0;RASQ=0.00;REF=712;REFPAIR=26;RP=3;RPQ=62.73;SB=0.0;SC=83M104D100M1X8N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.73:3:0:0:0.00:0:0.00:0.00:0:0:45.97:2:45.97:0:0.00:2:0.00:0:0.00:125.47:0.00:712:26:3:62.73:0:0.00:3
2	152338008	gridss40_50h	C	]2:152337779]C	125.47	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=41.32;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm40-219;BEIDH=0;BEIDL=2;BQ=23.94;BSC=1;BSCQ=23.94;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=104.93;EVENT=gridss40_50;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_50o;RAS=1;RASQ=62.73;REF=581;REFPAIR=54;RP=3;RPQ=62.73;SB=1.0;SC=1X8N1X123M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:41.32:0:0.00:0.00:0:0:23.94:1:23.94:0:0.00:1:0.00:0:0.00:125.47:62.73:581:54:3:62.73:0:0.00:3
2	152343028	gridss40_58o	G	G[2:152343063[	208.66	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=104.33;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm40-240;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=208.66;EVENT=gridss40_58;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_58h;RAS=0;RASQ=0.00;REF=333;REFPAIR=18;RP=5;RPQ=104.33;SC=171M26D100M1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.33:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:208.66:0.00:333:18:5:104.33:0:0.00:5
2	152343063	gridss40_58h	T	]2:152343028]T	208.66	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=4;BANRPQ=84.08;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm40-240;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=208.66;EVENT=gridss40_58;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_58o;RAS=1;RASQ=104.33;REF=309;REFPAIR=29;RP=5;RPQ=104.33;SC=1X9N1X268M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:4:84.08:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:208.66:104.33:309:29:5:104.33:0:0.00:5
2	215593262	gridss46_845b	T	.ACAATTCTTCTTTAATGATTT	244.10	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=87.74;BASRP=0;BASSR=4;BEID=asm46-762;BEIDH=-1;BEIDL=20;BQ=244.10;BSC=7;BSCQ=156.35;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=219.91;EVENT=gridss46_845;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=95;REFPAIR=10;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:87.74:0:4:244.10:7:156.35:0:0.00:7:0.00:0:0.00:0.00:0.00:95:10:0:0.00:0:0.00:0
2	215593276	gridss46_201b	T	TTTTTGAAAAAAAAAAATAGAAAGTACTTCTCCTTTGTAAAAAAAGGGAAATTAAAAAAAAAAAAAAAGAATGGGGCTC.	704.33	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=216.45;BASRP=0;BASSR=8;BEID=asm46-5;BEIDH=-1;BEIDL=0;BQ=704.33;BSC=16;BSCQ=487.88;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=535.94;EVENT=gridss46_201;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=97;REFPAIR=20;RP=0;RPQ=0.00;SB=0.9166667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:216.45:0:8:704.33:16:487.88:0:0.00:16:0.00:0:0.00:0.00:0.00:97:20:0:0.00:0:0.00:0
2	215595871	gridss46_221b	A	AAACATTC.	273.61	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=115.59;BASRP=0;BASSR=6;BEID=asm46-15;BEIDH=-1;BEIDL=0;BQ=273.61;BSC=7;BSCQ=158.02;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=273.61;EVENT=gridss46_221;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=195;REFPAIR=22;RP=0;RPQ=0.00;SB=0.84615386;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:115.59:0:6:273.61:7:158.02:0:0.00:7:0.00:0:0.00:0.00:0.00:195:22:0:0.00:0:0.00:0
2	215610997	gridss46_52o	C	C[2:215611047[	62.66	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-13,14;CQ=62.66;EVENT=gridss46_52;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_52h;RAS=0;RASQ=0.00;REF=269;REFPAIR=20;RP=3;RPQ=62.66;SC=101M11D178M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.66:0.00:269:20:3:62.66:0:0.00:3
2	215611047	gridss46_52h	A	]2:215610997]A	62.66	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-8,9;CQ=62.66;EVENT=gridss46_52;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_52o;RAS=0;RASQ=0.00;REF=152;REFPAIR=14;RP=3;RPQ=62.66;SC=1X26N1X175M4D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.66:0.00:152:14:3:62.66:0:0.00:3
2	215613604	gridss46_340b	T	TTACTGAACA.	269.52	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=134.76;BASRP=0;BASSR=7;BEID=asm46-194;BEIDH=-1;BEIDL=0;BQ=269.52;BSC=7;BSCQ=134.76;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=269.52;EVENT=gridss46_340;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=85;REFPAIR=7;RP=0;RPQ=0.00;SB=0.14285715;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:134.76:0:7:269.52:7:134.76:0:0.00:7:0.00:0:0.00:0.00:0.00:85:7:0:0.00:0:0.00:0
2	215619428	gridss46_62o	G	G[2:215619534[	64.23	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-51,52;CIRPOS=-37,38;CQ=64.23;EVENT=gridss46_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_62h;RAS=0;RASQ=0.00;REF=460;REFPAIR=44;RP=3;RPQ=64.23;SB=0.0;SC=204M1X102N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:64.23:0.00:460:44:3:64.23:0:0.00:3
2	215619534	gridss46_62h	T	]2:215619428]T	64.23	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=43.90;BSC=2;BSCQ=43.90;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-37,38;CIRPOS=-51,52;CQ=64.23;EVENT=gridss46_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_62o;RAS=0;RASQ=0.00;REF=452;REFPAIR=35;RP=3;RPQ=64.23;SB=0.5;SC=1X74N1X232M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:43.90:2:43.90:0:0.00:2:0.00:0:0.00:64.23:0.00:452:35:3:64.23:0:0.00:3
2	215619831	gridss46_64o	G	G[2:215619909[	84.50	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-50,50;CIRPOS=-5,6;CQ=84.50;EVENT=gridss46_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_64h;RAS=0;RASQ=0.00;REF=231;REFPAIR=17;RP=4;RPQ=84.50;SC=207M1X99N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.50:0.00:231:17:4:84.50:0:0.00:4
2	215619909	gridss46_64h	T	]2:215619831]T	84.50	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-50,50;CQ=84.50;EVENT=gridss46_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_64o;RAS=0;RASQ=0.00;REF=227;REFPAIR=16;RP=4;RPQ=84.50;SC=1X10N1X296M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.50:0.00:227:16:4:84.50:0:0.00:4
2	215620389	gridss46_65o	A	A[2:215620465[	294.50	LOW_QUAL	AS=1;ASQ=125.85;ASRP=6;ASSR=0;BA=0;BANRP=2;BANRPQ=42.79;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-239,asm46-964;BEIDH=2,255;BEIDL=0,0;BQ=20.53;BSC=1;BSCQ=20.53;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-26,27;CIRPOS=0,1;CQ=294.50;EVENT=gridss46_65;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_65h;RAS=1;RASQ=0.00;REF=294;REFPAIR=22;RP=8;RPQ=168.65;SB=0.0;SC=254M1X52N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:125.85:6:0:2:42.79:0:0.00:0.00:0:0:20.53:1:20.53:0:0.00:1:0.00:0:0.00:294.50:0.00:294:22:8:168.65:0:0.00:8
2	215620465	gridss46_65h	A	]2:215620389]A	294.50	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-239,asm46-964;BEIDH=0,0;BEIDL=2,255;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-26,27;CQ=294.50;EVENT=gridss46_65;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_65o;RAS=1;RASQ=125.85;REF=281;REFPAIR=18;RP=8;RPQ=168.65;SC=2X306M;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:294.50:125.85:281:18:8:168.65:0:0.00:8
2	215620470	gridss46_67o	A	A[2:215620552[	84.48	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.64;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-240;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-18,19;CIRPOS=-5,6;CQ=190.76;EVENT=gridss46_67;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_67h;RAS=0;RASQ=0.00;REF=257;REFPAIR=16;RP=1;RPQ=20.84;SC=100M1X36N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.64:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.48:0.00:257:16:1:20.84:0:0.00:3
2	215620552	gridss46_67h	A	]2:215620470]A	84.48	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-240;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-18,19;CQ=190.76;EVENT=gridss46_67;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_67o;RAS=1;RASQ=63.64;REF=305;REFPAIR=24;RP=1;RPQ=20.84;SC=1X10N1X100D136M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.48:63.64:305:24:1:20.84:0:0.00:3
2	215622493	gridss46_69o	G	G[2:215622578[	63.37	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-1011;BEIDH=170;BEIDL=0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-69,69;CIRPOS=-6,7;CQ=63.37;EVENT=gridss46_69;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_69h;RAS=1;RASQ=0.00;REF=166;REFPAIR=12;RP=3;RPQ=63.37;SB=0.0;SC=169M1X137N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:63.37:0.00:166:12:3:63.37:0:0.00:3
2	215622578	gridss46_69h	A	]2:215622493]A	63.37	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-1011;BEIDH=0;BEIDL=170;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-69,69;CQ=63.37;EVENT=gridss46_69;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_69o;RAS=0;RASQ=0.00;REF=137;REFPAIR=14;RP=3;RPQ=63.37;SC=1X12N1X158M35D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.37:0.00:137:14:3:63.37:0:0.00:3
2	215623955	gridss46_75o	C	C[2:215624080[	125.71	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.85;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-287;BEIDH=2;BEIDL=0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-35,36;CQ=125.71;EVENT=gridss46_75;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_75h;RAS=0;RASQ=0.00;REF=234;REFPAIR=8;RP=3;RPQ=62.85;SB=0.0;SC=236M1X70N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.85:3:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:125.71:0.00:234:8:3:62.85:0:0.00:3
2	215624080	gridss46_75h	G	]2:215623955]G	125.71	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.71;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-287;BEIDH=0;BEIDL=2;BQ=75.01;BSC=3;BSCQ=75.01;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-35,36;CQ=125.71;EVENT=gridss46_75;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_75o;RAS=1;RASQ=62.85;REF=245;REFPAIR=9;RP=3;RPQ=62.85;SB=1.0;SC=1X70N1X136M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.71:0:0.00:0.00:0:0:75.01:3:75.01:0:0.00:3:0.00:0:0.00:125.71:62.85:245:9:3:62.85:0:0.00:3
2	215624131	gridss46_76o	A	A[2:215624362[	105.21	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.03;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-284;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=105.21;EVENT=gridss46_76;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_76h;RAS=0;RASQ=0.00;REF=354;REFPAIR=17;RP=2;RPQ=42.18;SC=101M100D100M1X5N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.03:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:105.21:0.00:354:17:2:42.18:0:0.00:3
2	215624327	gridss46_79o	A	A[2:215624474[	125.99	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.99;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-288;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-32,33;CQ=125.99;EVENT=gridss46_79;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_79h;RAS=0;RASQ=0.00;REF=76;REFPAIR=3;RP=3;RPQ=62.99;SC=101M1D127M1X77N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.99:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.99:0.00:76:3:3:62.99:0:0.00:3
2	215624362	gridss46_76h	C	]2:215624131]C	105.21	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=20.76;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-284;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=105.21;EVENT=gridss46_76;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_76o;RAS=1;RASQ=63.03;REF=117;REFPAIR=8;RP=2;RPQ=42.18;SC=1X5N1X165M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:20.76:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:105.21:63.03:117:8:2:42.18:0:0.00:3
2	215624474	gridss46_79h	A	]2:215624327]A	125.99	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-288;BEIDH=0;BEIDL=2;BQ=25.13;BSC=1;BSCQ=25.13;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-39,39;CQ=125.99;EVENT=gridss46_79;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_79o;RAS=1;RASQ=62.99;REF=136;REFPAIR=15;RP=3;RPQ=62.99;SB=0.0;SC=1X64N1X179M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.41:0:0.00:0.00:0:0:25.13:1:25.13:0:0.00:1:0.00:0:0.00:125.99:62.99:136:15:3:62.99:0:0.00:3
2	215624714	gridss46_80o	A	A[2:215624763[	62.22	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-35,36;CQ=62.22;EVENT=gridss46_80;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_80h;RAS=0;RASQ=0.00;REF=535;REFPAIR=31;RP=3;RPQ=62.22;SC=174M20D100M1X12N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.22:0.00:535:31:3:62.22:0:0.00:3
2	215624763	gridss46_80h	A	]2:215624714]A	62.22	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=40.58;BSC=2;BSCQ=40.58;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-6,7;CQ=62.22;EVENT=gridss46_80;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_80o;RAS=0;RASQ=0.00;REF=392;REFPAIR=22;RP=3;RPQ=62.22;SB=0.0;SC=1X70N1X103M32D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:40.58:2:40.58:0:0.00:2:0.00:0:0.00:62.22:0.00:392:22:3:62.22:0:0.00:3
2	215628593	gridss46_85o	A	A[2:215628695[	85.52	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-41,41;CIRPOS=-24,24;CQ=64.20;EVENT=gridss46_85;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_85h;RAS=0;RASQ=0.00;REF=247;REFPAIR=22;RP=4;RPQ=85.52;SC=225M1X81N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:85.52:0.00:247:22:4:85.52:0:0.00:4
2	215628695	gridss46_85h	C	]2:215628593]C	85.52	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-41,41;CQ=64.20;EVENT=gridss46_85;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_85o;RAS=0;RASQ=0.00;REF=342;REFPAIR=19;RP=4;RPQ=85.52;SC=1X47N1X306M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:85.52:0.00:342:19:4:85.52:0:0.00:4
2	215632036	gridss46_1076b	A	.TAAAGAGA	190.81	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=95.41;BASRP=0;BASSR=5;BEID=asm46-1029;BEIDH=-1;BEIDL=7;BQ=190.81;BSC=5;BSCQ=95.41;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=171.25;EVENT=gridss46_1076;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=159;REFPAIR=1;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:95.41:0:5:190.81:5:95.41:0:0.00:5:0.00:0:0.00:0.00:0.00:159:1:0:0.00:0:0.00:0
2	215632257	gridss46_1080b	T	.CCATGT	113.83	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=56.92;BASRP=0;BASSR=3;BEID=asm46-1030;BEIDH=-1;BEIDL=5;BQ=113.83;BSC=3;BSCQ=56.92;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=113.83;EVENT=gridss46_1080;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=344;REFPAIR=34;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:56.92:0:3:113.83:3:56.92:0:0.00:3:0.00:0:0.00:0.00:0.00:344:34:0:0.00:0:0.00:0
2	215632846	gridss46_93o	C	C[2:215632896[	62.50	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=42.43;BSC=2;BSCQ=42.43;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-29,30;CIRPOS=-7,7;CQ=62.50;EVENT=gridss46_93;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_93h;RAS=0;RASQ=0.00;REF=260;REFPAIR=20;RP=3;RPQ=62.50;SB=0.5;SC=101M36D111M1X58N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:42.43:2:42.43:0:0.00:2:0.00:0:0.00:62.50:0.00:260:20:3:62.50:0:0.00:3
2	215632896	gridss46_93h	T	]2:215632846]T	62.50	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-29,30;CQ=62.50;EVENT=gridss46_93;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_93o;RAS=0;RASQ=0.00;REF=245;REFPAIR=20;RP=3;RPQ=62.50;SC=1X13N1X100M25D134M1D34M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.50:0.00:245:20:3:62.50:0:0.00:3
2	215633340	gridss46_95o	C	C[2:215633458[	126.58	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.29;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-389;BEIDH=2;BEIDL=0;BQ=149.64;BSC=6;BSCQ=149.64;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CIPOS=-47,48;CIRPOS=-47,48;CQ=126.58;EVENT=gridss46_95;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_95h;RAS=0;RASQ=0.00;REF=439;REFPAIR=27;RP=3;RPQ=63.29;SB=0.5;SC=101M14D100M1X94N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.29:3:0:0:0.00:0:0.00:0.00:0:0:149.64:6:149.64:0:0.00:6:0.00:0:0.00:126.58:0.00:439:27:3:63.29:0:0.00:3
2	215633458	gridss46_95h	A	]2:215633340]A	126.58	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-389;BEIDH=0;BEIDL=2;BQ=40.97;BSC=2;BSCQ=40.97;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-47,48;CIRPOS=-47,48;CQ=126.58;EVENT=gridss46_95;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_95o;RAS=1;RASQ=63.29;REF=290;REFPAIR=25;RP=3;RPQ=63.29;SB=0.5;SC=1X94N1X157M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:40.97:2:40.97:0:0.00:2:0.00:0:0.00:126.58:63.29:290:25:3:63.29:0:0.00:3
2	215635482	gridss46_98o	C	C[2:215635578[	126.18	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.09;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-381;BEIDH=2;BEIDL=0;BQ=21.90;BSC=1;BSCQ=21.90;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-5,6;CQ=126.18;EVENT=gridss46_98;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_98h;RAS=0;RASQ=0.00;REF=358;REFPAIR=26;RP=3;RPQ=63.09;SB=1.0;SC=101M12D183M1X10N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.09:3:0:0:0.00:0:0.00:0.00:0:0:21.90:1:21.90:0:0.00:1:0.00:0:0.00:126.18:0.00:358:26:3:63.09:0:0.00:3
2	215635578	gridss46_98h	G	]2:215635482]G	126.18	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-381;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-5,6;CQ=126.18;EVENT=gridss46_98;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_98o;RAS=1;RASQ=63.09;REF=381;REFPAIR=25;RP=3;RPQ=63.09;SC=1X10N1X228M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.18:63.09:381:25:3:63.09:0:0.00:3
2	215636667	gridss46_501b	A	AAAACATTTTCCCTTTTTTTATAATTTGTAAATTTATTTTTTCAAGGTATGTTCTAATCTTTTTCGA.	397.74	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=152.38;BASRP=0;BASSR=6;BEID=asm46-351;BEIDH=-1;BEIDL=0;BQ=397.74;BSC=10;BSCQ=245.36;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=304.75;EVENT=gridss46_501;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=26;REFPAIR=8;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:152.38:0:6:397.74:10:245.36:0:0.00:10:0.00:0:0.00:0.00:0.00:26:8:0:0.00:0:0.00:0
2	215637832	gridss46_101o	G	G[2:215637872[	62.06	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-2,3;CQ=62.06;EVENT=gridss46_101;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_101h;RAS=0;RASQ=0.00;REF=303;REFPAIR=17;RP=3;RPQ=62.06;SC=191M6D100M1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.06:0.00:303:17:3:62.06:0:0.00:3
2	215637872	gridss46_101h	C	]2:215637832]C	62.06	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-5,5;CQ=62.06;EVENT=gridss46_101;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_101o;RAS=0;RASQ=0.00;REF=245;REFPAIR=20;RP=3;RPQ=62.06;SC=1X4N1X156M45D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.06:0.00:245:20:3:62.06:0:0.00:3
2	215644963	gridss46_108o	A	A[2:215645103[	254.29	LOW_QUAL	AS=1;ASQ=148.10;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-1148,asm46-446;BEIDH=440,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=254.29;EVENT=gridss46_108;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_108h;RAS=1;RASQ=0.00;REF=165;REFPAIR=26;RP=5;RPQ=106.19;SC=439M1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:148.10:7:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:254.29:0.00:165:26:5:106.19:0:0.00:7
2	215645103	gridss46_108h	A	]2:215644963]A	254.29	LOW_QUAL	AS=1;ASQ=0.00;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-1148,asm46-446;BEIDH=0,0;BEIDL=440,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=254.29;EVENT=gridss46_108;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_108o;RAS=1;RASQ=148.10;REF=321;REFPAIR=26;RP=5;RPQ=106.19;SC=1X9N1X276M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:7:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:254.29:148.10:321:26:5:106.19:0:0.00:7
2	215645601	gridss46_113o	A	A[2:215645667[	207.49	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=103.75;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-443;BEIDH=2;BEIDL=0;BQ=43.10;BSC=2;BSCQ=43.10;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-28,29;CIRPOS=-28,29;CQ=207.49;EVENT=gridss46_113;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_113h;RAS=0;RASQ=0.00;REF=455;REFPAIR=26;RP=5;RPQ=103.75;SB=0.5;SC=250M1X56N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:103.75:5:0:0:0.00:0:0.00:0.00:0:0:43.10:2:43.10:0:0.00:2:0.00:0:0.00:207.49:0.00:455:26:5:103.75:0:0.00:5
2	215645667	gridss46_113h	T	]2:215645601]T	207.49	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=5;BANRPQ=103.75;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-443;BEIDH=0;BEIDL=2;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-28,29;CIRPOS=-28,29;CQ=207.49;EVENT=gridss46_113;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_113o;RAS=1;RASQ=103.75;REF=508;REFPAIR=28;RP=5;RPQ=103.75;SB=1.0;SC=1X56N1X196M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:5:103.75:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:207.49:103.75:508:28:5:103.75:0:0.00:5
2	215645932	gridss46_118o	T	T[2:215646057[	192.08	LOW_QUAL	AS=1;ASQ=85.33;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-1150,asm46-445;BEIDH=162,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-19,20;CQ=192.08;EVENT=gridss46_118;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_118h;RAS=1;RASQ=0.00;REF=386;REFPAIR=22;RP=5;RPQ=106.75;SC=101M13D161M1X31N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:85.33:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:192.08:0.00:386:22:5:106.75:0:0.00:5
2	215646057	gridss46_118h	C	]2:215645932]C	192.08	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-1150,asm46-445;BEIDH=0,0;BEIDL=162,2;BQ=81.12;BSC=3;BSCQ=81.12;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-16,16;CQ=192.08;EVENT=gridss46_118;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_118o;RAS=1;RASQ=85.33;REF=488;REFPAIR=38;RP=5;RPQ=106.75;SB=0.33333334;SC=1X38N1X268M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:81.12:3:81.12:0:0.00:3:0.00:0:0.00:192.08:85.33:488:38:5:106.75:0:0.00:5
2	215651227	gridss46_120o	A	A[2:215651364[	125.67	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.83;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-476;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-37,37;CIRPOS=-37,37;CQ=125.67;EVENT=gridss46_120;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_120h;RAS=0;RASQ=0.00;REF=121;REFPAIR=7;RP=3;RPQ=62.83;SC=233M1X73N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.83:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.67:0.00:121:7:3:62.83:0:0.00:3
2	215651364	gridss46_120h	G	]2:215651227]G	125.67	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-476;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-37,37;CIRPOS=-37,37;CQ=125.67;EVENT=gridss46_120;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_120o;RAS=1;RASQ=62.83;REF=195;REFPAIR=8;RP=3;RPQ=62.83;SC=1X73N1X120M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.67:62.83:195:8:3:62.83:0:0.00:3
2	215657198	gridss46_609b	A	AAAAAACAATTAAGAAGAATTTAATTTCAAAAAAAAAACAGATTGAACAAA.	233.48	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=69.40;BASRP=0;BASSR=3;BEID=asm46-489;BEIDH=-1;BEIDL=0;BQ=233.48;BSC=7;BSCQ=164.07;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=138.80;EVENT=gridss46_609;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=59;REFPAIR=7;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:69.40:0:3:233.48:7:164.07:0:0.00:7:0.00:0:0.00:0.00:0.00:59:7:0:0.00:0:0.00:0
2	215661623	gridss46_134o	G	G[2:215661877[	64.23	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-29,30;CIRPOS=-82,82;CQ=64.23;EVENT=gridss46_134;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_134h;RAS=0;RASQ=0.00;REF=3;REFPAIR=0;RP=3;RPQ=64.23;SC=248M1X58N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:2:42.82:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.23:0.00:3:0:3:64.23:0:0.00:3
2	215661877	gridss46_134h	C	]2:215661623]C	64.23	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=41.67;BSC=2;BSCQ=41.67;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-82,82;CIRPOS=-29,30;CQ=64.23;EVENT=gridss46_134;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_134o;RAS=0;RASQ=0.00;REF=424;REFPAIR=29;RP=3;RPQ=64.23;SB=1.0;SC=1X163N1X143M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:41.67:2:41.67:0:0.00:2:0.00:0:0.00:64.23:0.00:424:29:3:64.23:0:0.00:3
2	215666574	gridss46_1242b	G	.AAAGTGTTAAAAATTAAAAAAAAGGAAGAATTTGTTGGGGGTTTGGGGTTTAAATGTTAAAAAACAAATTTTTGGGGGGG	695.04	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=303.72;BASRP=0;BASSR=11;BEID=asm46-1232;BEIDH=-1;BEIDL=79;BQ=695.04;BSC=14;BSCQ=391.32;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=656.54;EVENT=gridss46_1242;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=71;REFPAIR=8;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:303.72:0:11:695.04:14:391.32:0:0.00:14:0.00:0:0.00:0.00:0.00:71:8:0:0.00:0:0.00:0
2	215670675	gridss46_148o	C	C[2:215670839[	64.23	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-1289;BEIDH=296;BEIDL=0;BQ=93.70;BSC=4;BSCQ=93.70;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-74,75;CQ=64.23;EVENT=gridss46_148;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_148h;RAS=1;RASQ=0.00;REF=418;REFPAIR=20;RP=3;RPQ=64.23;SB=0.25;SC=158M1X148N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:93.70:4:93.70:0:0.00:4:0.00:0:0.00:64.23:0.00:418:20:3:64.23:0:0.00:3
2	215670839	gridss46_148h	C	]2:215670675]C	64.23	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-1289;BEIDH=0;BEIDL=296;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIRPOS=-74,75;CQ=64.23;EVENT=gridss46_148;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_148o;RAS=0;RASQ=0.00;REF=380;REFPAIR=28;RP=3;RPQ=64.23;SC=1X100M3D101M2D96M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.23:0.00:380:28:3:64.23:0:0.00:3
2	215670909	gridss46_152o	T	T[2:215671032[	148.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.44;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-609;BEIDH=2;BEIDL=0;BQ=37.84;BSC=2;BSCQ=37.84;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-36,36;CIRPOS=-36,36;CQ=126.88;EVENT=gridss46_152;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_152h;RAS=0;RASQ=0.00;REF=240;REFPAIR=16;RP=4;RPQ=84.85;SB=0.5;SC=310M1X71N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.44:3:0:0:0.00:0:0.00:0.00:0:0:37.84:2:37.84:0:0.00:2:0.00:0:0.00:148.29:0.00:240:16:4:84.85:0:0.00:4
2	215671032	gridss46_152h	G	]2:215670909]G	148.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-609;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-36,36;CIRPOS=-36,36;CQ=126.88;EVENT=gridss46_152;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_152o;RAS=1;RASQ=63.44;REF=106;REFPAIR=9;RP=4;RPQ=84.85;SC=1X71N1X259M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.82:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:148.29:63.44:106:9:4:84.85:0:0.00:4
2	216973924	gridss46_716b	G	GCCGGAATCTG.	351.57	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=216.75;BASRP=0;BASSR=8;BEID=asm46-632;BEIDH=-1;BEIDL=0;BQ=351.57;BSC=7;BSCQ=134.82;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=351.57;EVENT=gridss46_716;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=522;REFPAIR=66;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:216.75:0:8:351.57:7:134.82:0:0.00:9:0.00:0:0.00:0.00:0.00:522:66:0:0.00:0:0.00:0
2	216992434	gridss46_165o	C	C[2:216992555[	190.67	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=105.85;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-681;BEIDH=2;BEIDL=0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-10,11;CQ=190.67;EVENT=gridss46_165;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_165h;RAS=0;RASQ=0.00;REF=537;REFPAIR=24;RP=4;RPQ=84.82;SB=0.0;SC=128M33D125M1X20N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.85:5:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:190.67:0.00:537:24:4:84.82:0:0.00:5
2	216992555	gridss46_165h	T	]2:216992434]T	190.67	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=4;BANRPQ=84.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-681;BEIDH=0;BEIDL=2;BQ=24.53;BSC=1;BSCQ=24.53;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-10,11;CQ=190.67;EVENT=gridss46_165;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_165o;RAS=1;RASQ=105.85;REF=517;REFPAIR=45;RP=4;RPQ=84.82;SB=0.0;SC=1X20N1X262M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:4:84.82:0:0.00:0.00:0:0:24.53:1:24.53:0:0.00:1:0.00:0:0.00:190.67:105.85:517:45:4:84.82:0:0.00:5
3	14187107	gridss50_4o	G	G[3:14187279[	105.56	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.05;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm50-49;BEIDH=2;BEIDL=0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-29,29;CQ=105.56;EVENT=gridss50_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss50_4h;RAS=0;RASQ=0.00;REF=280;REFPAIR=21;RP=2;RPQ=42.51;SB=1.0;SC=101M48D100M1X57N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.05:3:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:105.56:0.00:280:21:2:42.51:0:0.00:3
3	14187279	gridss50_4h	C	]3:14187107]C	105.56	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm50-49;BEIDH=0;BEIDL=2;BQ=45.49;BSC=2;BSCQ=45.49;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-29,29;CQ=105.56;EVENT=gridss50_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss50_4o;RAS=1;RASQ=63.05;REF=278;REFPAIR=13;RP=2;RPQ=42.51;SB=0.5;SC=1X57N1X174M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:45.49:2:45.49:0:0.00:2:0.00:0:0.00:105.56:63.05:278:13:2:42.51:0:0.00:3
3	32870017	gridss52_35b	T	TTTGAG.	149.40	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=74.70;BASRP=0;BASSR=4;BEID=asm52-3;BEIDH=-1;BEIDL=0;BQ=149.40;BSC=4;BSCQ=74.70;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=149.40;EVENT=gridss52_35;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=42;REFPAIR=6;RP=0;RPQ=0.00;SB=0.25;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:74.70:0:4:149.40:4:74.70:0:0.00:4:0.00:0:0.00:0.00:0.00:42:6:0:0.00:0:0.00:0
3	36669110	gridss52_185b	C	.AGGGACC	114	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.00;BASRP=0;BASSR=3;BEID=asm52-163;BEIDH=-1;BEIDL=6;BQ=114.00;BSC=3;BSCQ=57.00;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=114.00;EVENT=gridss52_185;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=133;REFPAIR=11;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.00:0:3:114.00:3:57.00:0:0.00:3:0.00:0:0.00:0.00:0.00:133:11:0:0.00:0:0.00:0
3	36976937	gridss52_203b	T	.GGGCTCTTATTTTTTTTTCTGGTTTTCCCAGAAGGAGCCTGAAT	301.63	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=85.43;BASRP=0;BASSR=3;BEID=asm52-174;BEIDH=-1;BEIDL=43;BQ=301.63;BSC=8;BSCQ=216.19;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=322.02;EVENT=gridss52_203;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=106;REFPAIR=18;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:85.43:0:3:301.63:8:216.19:0:0.00:8:0.00:0:0.00:0.00:0.00:106:18:0:0.00:0:0.00:0
3	36976955	gridss52_52b	T	TGGGATGGGGTTTTTCTTTC.	123.70	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=61.85;BASRP=0;BASSR=3;BEID=asm52-16;BEIDH=-1;BEIDL=0;BQ=123.70;BSC=3;BSCQ=61.85;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=123.70;EVENT=gridss52_52;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=82;REFPAIR=9;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:61.85:0:3:123.70:3:61.85:0:0.00:3:0.00:0:0.00:0.00:0.00:82:9:0:0.00:0:0.00:0
3	37033604	gridss52_7o	A	A[3:37033646[	126.08	LOW_QUAL	AS=1;ASQ=63.04;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm52-255,asm52-66;BEIDH=139,2;BEIDL=0,0;BQ=25.31;BSC=1;BSCQ=25.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-20,20;CQ=167.85;EVENT=gridss52_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_7h;RAS=1;RASQ=0.00;REF=511;REFPAIR=24;RP=3;RPQ=63.04;SB=1.0;SC=139M142D1X25N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.04:3:0:0:0.00:0:0.00:0.00:0:0:25.31:1:25.31:0:0.00:1:0.00:0:0.00:126.08:0.00:511:24:3:63.04:0:0.00:3
3	37033646	gridss52_7h	A	]3:37033604]A	126.08	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm52-255,asm52-66;BEIDH=0,0;BEIDL=139,2;BQ=53.41;BSC=2;BSCQ=53.41;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-20,20;CIRPOS=-13,13;CQ=167.85;EVENT=gridss52_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_7o;RAS=1;RASQ=63.04;REF=435;REFPAIR=33;RP=3;RPQ=63.04;SB=0.5;SC=1X39N1X133M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:53.41:2:53.41:0:0.00:2:0.00:0:0.00:126.08:63.04:435:33:3:63.04:0:0.00:3
3	37033722	gridss52_9o	G	G[3:37033793[	188.02	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.35;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm52-64;BEIDH=2;BEIDL=0;BQ=42.73;BSC=2;BSCQ=42.73;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-15,16;CQ=188.02;EVENT=gridss52_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_9h;RAS=0;RASQ=0.00;REF=434;REFPAIR=37;RP=5;RPQ=104.66;SB=0.5;SC=268M1X38N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.35:4:0:0:0.00:0:0.00:0.00:0:0:42.73:2:42.73:0:0.00:2:0.00:0:0.00:188.02:0.00:434:37:5:104.66:0:0.00:5
3	37033793	gridss52_9h	A	]3:37033722]A	188.02	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=5;BANRPQ=104.66;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm52-64;BEIDH=0;BEIDL=2;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-19,20;CQ=188.02;EVENT=gridss52_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_9o;RAS=1;RASQ=83.35;REF=586;REFPAIR=46;RP=5;RPQ=104.66;SB=1.0;SC=1X30N1X276M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:5:104.66:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:188.02:83.35:586:46:5:104.66:0:0.00:5
3	37035294	gridss52_16o	T	T[3:37035399[	188.95	LOW_QUAL	AS=1;ASQ=104.84;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm52-254,asm52-65;BEIDH=132,2;BEIDL=0,0;BQ=58.60;BSC=2;BSCQ=58.60;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-21,21;CQ=188.95;EVENT=gridss52_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_16h;RAS=1;RASQ=0.00;REF=345;REFPAIR=29;RP=4;RPQ=84.11;SB=0.5;SC=74M60D131M1X41N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.84:5:0:0:0.00:0:0.00:0.00:0:0:58.60:2:58.60:0:0.00:2:0.00:0:0.00:188.95:0.00:345:29:4:84.11:0:0.00:5
3	37035399	gridss52_16h	C	]3:37035294]C	188.95	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm52-254,asm52-65;BEIDH=0,0;BEIDL=132,2;BQ=19.56;BSC=1;BSCQ=19.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-21,21;CQ=188.95;EVENT=gridss52_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_16o;RAS=1;RASQ=104.84;REF=398;REFPAIR=24;RP=4;RPQ=84.11;SB=0.0;SC=1X41N1X266M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:19.56:1:19.56:0:0.00:1:0.00:0:0.00:188.95:104.84:398:24:4:84.11:0:0.00:5
3	37035660	gridss52_19o	G	G[3:37035771[	63.40	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=58.34;BSC=3;BSCQ=58.34;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-31,31;CQ=63.40;EVENT=gridss52_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_19h;RAS=0;RASQ=0.00;REF=565;REFPAIR=44;RP=3;RPQ=63.40;SB=0.33333334;SC=111M34D100M1X61N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:58.34:3:58.34:0:0.00:3:0.00:0:0.00:63.40:0.00:565:44:3:63.40:0:0.00:3
3	37035771	gridss52_19h	G	]3:37035660]G	63.40	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIRPOS=-31,31;CQ=63.40;EVENT=gridss52_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_19o;RAS=0;RASQ=0.00;REF=357;REFPAIR=34;RP=3;RPQ=63.40;SC=1X192M14D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.40:0.00:357:34:3:63.40:0:0.00:3
3	37045927	gridss52_26o	T	T[3:37045965[	145.29	LOW_QUAL	AS=1;ASQ=62.09;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm52-128,asm52-301;BEIDH=2,150;BEIDL=0,0;BQ=67.80;BSC=3;BSCQ=67.80;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-22,23;CIRPOS=-6,7;CQ=145.29;EVENT=gridss52_26;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_26h;RAS=1;RASQ=0.00;REF=573;REFPAIR=38;RP=4;RPQ=83.20;SB=0.33333334;SC=150M12D100M1X44N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.09:3:0:0:0.00:0:0.00:0.00:0:0:67.80:3:67.80:0:0.00:3:0.00:0:0.00:145.29:0.00:573:38:4:83.20:0:0.00:4
3	37045965	gridss52_26h	G	]3:37045927]G	145.29	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm52-128,asm52-301;BEIDH=0,0;BEIDL=2,150;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-22,23;CQ=145.29;EVENT=gridss52_26;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_26o;RAS=1;RASQ=62.09;REF=556;REFPAIR=45;RP=4;RPQ=83.20;SC=1X12N1X172M21D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:145.29:62.09:556:45:4:83.20:0:0.00:4
3	37053619	gridss53_11o	T	T[3:37053788[	187.69	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=104.21;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-42;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-4,4;CQ=187.69;EVENT=gridss53_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_11h;RAS=0;RASQ=0.00;REF=164;REFPAIR=10;RP=4;RPQ=83.48;SC=299M1X7N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.21:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:187.69:0.00:164:10:4:83.48:0:0.00:5
3	37053788	gridss53_11h	A	]3:37053619]A	187.69	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-42;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-4,4;CQ=187.69;EVENT=gridss53_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_11o;RAS=1;RASQ=104.21;REF=385;REFPAIR=21;RP=4;RPQ=83.48;SC=1X7N1X189M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:187.69:104.21:385:21:4:83.48:0:0.00:5
3	37054087	gridss53_16o	T	T[3:37054138[	147.76	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.37;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-43;BEIDH=2;BEIDL=0;BQ=20.35;BSC=1;BSCQ=20.35;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-17,18;CQ=147.76;EVENT=gridss53_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_16h;RAS=0;RASQ=0.00;REF=331;REFPAIR=15;RP=4;RPQ=84.39;SB=1.0;SC=132M11D146M1X17N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.37:3:0:0:0.00:0:0.00:0.00:0:0:20.35:1:20.35:0:0.00:1:0.00:0:0.00:147.76:0.00:331:15:4:84.39:0:0.00:5
3	37054138	gridss53_16h	T	]3:37054087]T	147.76	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.43;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-43;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-17,18;CIRPOS=-9,9;CQ=147.76;EVENT=gridss53_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_16o;RAS=1;RASQ=63.37;REF=342;REFPAIR=23;RP=4;RPQ=84.39;SC=1X34N1X255M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.43:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.76:63.37:342:23:4:84.39:0:0.00:5
3	37062890	gridss53_33o	C	C[3:37063002[	85.06	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=34.72;BSC=1;BSCQ=34.72;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-29,29;CQ=85.06;EVENT=gridss53_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_33h;RAS=0;RASQ=0.00;REF=466;REFPAIR=20;RP=4;RPQ=85.06;SB=1.0;SC=294M1X30N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:34.72:1:34.72:0:0.00:1:0.00:0:0.00:85.06:0.00:466:20:4:85.06:0:0.00:4
3	37063002	gridss53_33h	C	]3:37062890]C	85.06	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-15,16;CQ=85.06;EVENT=gridss53_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_33o;RAS=0;RASQ=0.00;REF=464;REFPAIR=23;RP=4;RPQ=85.06;SC=1X57N1X109M6D134M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:85.06:0.00:464:23:4:85.06:0:0.00:4
3	37067103	gridss53_516b	T	.CCCTTTTGGGGCCTTTTTTTTTTTTTTTTTTTTTTTGGGTTTCTCCCATTTATTTTTTTTTATTTAT	122.99	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=61.49;BASRP=0;BASSR=3;BEID=asm53-467;BEIDH=-1;BEIDL=66;BQ=122.99;BSC=3;BSCQ=61.49;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=122.99;EVENT=gridss53_516;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=46;REFPAIR=10;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:61.49:0:3:122.99:3:61.49:0:0.00:3:0.00:0:0.00:0.00:0.00:46:10:0:0.00:0:0.00:0
3	37071321	gridss53_562b	T	.GGTATTTAACAGTGCCCCTTCTATTTTCCACCTATTTTCCCT	445.75	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=68.27;BASRP=0;BASSR=3;BEID=asm53-497;BEIDH=-1;BEIDL=41;BQ=445.75;BSC=15;BSCQ=377.48;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=136.54;EVENT=gridss53_562;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=118;REFPAIR=17;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:68.27:0:3:445.75:15:377.48:0:0.00:15:0.00:0:0.00:0.00:0.00:118:17:0:0.00:0:0.00:0
3	37072059	gridss53_230b	A	AAACCCTTTTGTTTTTTTTTCCGGGGCTTCTTTAATTTTTTAGGTCTCAGCCCCCTTTTGTCTATGCAA.	197.45	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=75.00;BASRP=0;BASSR=3;BEID=asm53-150;BEIDH=-1;BEIDL=0;BQ=197.45;BSC=4;BSCQ=122.45;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=160.38;EVENT=gridss53_230;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=56;REFPAIR=5;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:75.00:0:3:197.45:4:122.45:0:0.00:4:0.00:0:0.00:0.00:0.00:56:5:0:0.00:0:0.00:0
3	37072802	gridss53_53o	G	G[3:37072892[	168.01	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.01;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-196;BEIDH=2;BEIDL=0;BQ=19.97;BSC=1;BSCQ=19.97;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-38,38;CIRPOS=-38,38;CQ=168.01;EVENT=gridss53_53;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_53h;RAS=0;RASQ=0.00;REF=211;REFPAIR=22;RP=4;RPQ=84.01;SB=1.0;SC=231M1X75N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.01:4:0:0:0.00:0:0.00:0.00:0:0:19.97:1:19.97:0:0.00:1:0.00:0:0.00:168.01:0.00:211:22:4:84.01:0:0.00:4
3	37072892	gridss53_53h	T	]3:37072802]T	168.01	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=4;BANRPQ=84.01;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-196;BEIDH=0;BEIDL=2;BQ=36.04;BSC=1;BSCQ=36.04;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-38,38;CIRPOS=-38,38;CQ=168.01;EVENT=gridss53_53;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_53o;RAS=1;RASQ=84.01;REF=493;REFPAIR=41;RP=4;RPQ=84.01;SB=1.0;SC=1X75N1X193M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:4:84.01:0:0.00:0.00:0:0:36.04:1:36.04:0:0.00:1:0.00:0:0.00:168.01:84.01:493:41:4:84.01:0:0.00:4
3	37074082	gridss53_59o	G	G[3:37074267[	127.24	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.62;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-195;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-1,2;CQ=127.24;EVENT=gridss53_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_59h;RAS=0;RASQ=0.00;REF=515;REFPAIR=34;RP=3;RPQ=63.62;SC=101M45D158M1X2N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.62:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.24:0.00:515:34:3:63.62:0:0.00:3
3	37074267	gridss53_59h	C	]3:37074082]C	127.24	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-195;BEIDH=0;BEIDL=2;BQ=32.58;BSC=1;BSCQ=32.58;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-1,2;CQ=127.24;EVENT=gridss53_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_59o;RAS=1;RASQ=63.62;REF=510;REFPAIR=29;RP=3;RPQ=63.62;SB=1.0;SC=1X2N1X193M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.41:0:0.00:0.00:0:0:32.58:1:32.58:0:0.00:1:0.00:0:0.00:127.24:63.62:510:29:3:63.62:0:0.00:3
3	37083470	gridss53_68o	C	C[3:37083511[	82.94	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-609;BEIDH=145;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-15,16;CQ=82.94;EVENT=gridss53_68;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_68h;RAS=1;RASQ=0.00;REF=444;REFPAIR=31;RP=4;RPQ=82.94;SC=101M60D143M1X2N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:82.94:0.00:444:31:4:82.94:0:0.00:4
3	37083511	gridss53_68h	T	]3:37083470]T	82.94	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-609;BEIDH=0;BEIDL=145;BQ=68.40;BSC=3;BSCQ=68.40;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-1,2;CQ=82.94;EVENT=gridss53_68;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_68o;RAS=0;RASQ=0.00;REF=473;REFPAIR=36;RP=4;RPQ=82.94;SB=0.33333334;SC=1X30N1X100M12D164M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:68.40:3:68.40:0:0.00:3:0.00:0:0.00:82.94:0.00:473:36:4:82.94:0:0.00:4
3	37089519	gridss53_326b	A	AGCACCAACCAAGGACAGGACTAGGCAACCCTTCCACATCCACACCTCACAATAGTAACATCCTCTAC.	256.38	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=77.71;BASRP=0;BASSR=3;BEID=asm53-259;BEIDH=-1;BEIDL=0;BQ=256.38;BSC=7;BSCQ=178.67;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=179.08;EVENT=gridss53_326;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=147;REFPAIR=6;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:77.71:0:3:256.38:7:178.67:0:0.00:7:0.00:0:0.00:0.00:0.00:147:6:0:0.00:0:0.00:0
3	37090263	gridss53_73o	A	A[3:37090353[	63.91	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=44.62;BSC=2;BSCQ=44.62;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-41,41;CIRPOS=-45,45;CQ=63.91;EVENT=gridss53_73;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_73h;RAS=0;RASQ=0.00;REF=313;REFPAIR=22;RP=3;RPQ=63.91;SB=1.0;SC=225M1X81N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:44.62:2:44.62:0:0.00:2:0.00:0:0.00:63.91:0.00:313:22:3:63.91:0:0.00:3
3	37090353	gridss53_73h	A	]3:37090263]A	63.91	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=57.97;BSC=2;BSCQ=57.97;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-45,45;CIRPOS=-41,41;CQ=63.91;EVENT=gridss53_73;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_73o;RAS=0;RASQ=0.00;REF=320;REFPAIR=26;RP=3;RPQ=63.91;SB=1.0;SC=1X89N1X217M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:57.97:2:57.97:0:0.00:2:0.00:0:0.00:63.91:0.00:320:26:3:63.91:0:0.00:3
3	37090469	gridss53_75o	G	G[3:37090588[	126.22	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.11;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-312;BEIDH=2;BEIDL=0;BQ=25.31;BSC=1;BSCQ=25.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-37,37;CIRPOS=-37,37;CQ=126.22;EVENT=gridss53_75;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_75h;RAS=0;RASQ=0.00;REF=477;REFPAIR=27;RP=3;RPQ=63.11;SB=0.0;SC=101M3D129M1X73N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.11:3:0:0:0.00:0:0.00:0.00:0:0:25.31:1:25.31:0:0.00:1:0.00:0:0.00:126.22:0.00:477:27:3:63.11:0:0.00:3
3	37090588	gridss53_75h	T	]3:37090469]T	126.22	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-312;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-37,37;CIRPOS=-37,37;CQ=126.22;EVENT=gridss53_75;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_75o;RAS=1;RASQ=63.11;REF=474;REFPAIR=39;RP=3;RPQ=63.11;SC=1X73N1X179M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.22:63.11:474:39:3:63.11:0:0.00:3
3	42368975	gridss53_385b	T	TTAAAGGAA.	113.97	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=56.98;BASRP=0;BASSR=3;BEID=asm53-335;BEIDH=-1;BEIDL=0;BQ=113.97;BSC=3;BSCQ=56.98;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=113.97;EVENT=gridss53_385;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=79;REFPAIR=10;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:56.98:0:3:113.97:3:56.98:0:0.00:3:0.00:0:0.00:0.00:0.00:79:10:0:0.00:0:0.00:0
3	52442376	gridss54_28o	G	G[3:52442604[	148.81	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.70;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm54-120;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-10,10;CIRPOS=-4,4;CQ=148.81;EVENT=gridss54_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss54_28h;RAS=0;RASQ=0.00;REF=758;REFPAIR=56;RP=4;RPQ=85.11;SC=184M3D100M1X19N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.70:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:148.81:0.00:758:56:4:85.11:0:0.00:4
3	52442604	gridss54_28h	G	]3:52442376]G	148.81	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm54-120;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-10,10;CQ=148.81;EVENT=gridss54_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss54_28o;RAS=1;RASQ=63.70;REF=521;REFPAIR=36;RP=4;RPQ=85.11;SC=1X7N1X102M96D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.82:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:148.81:63.70:521:36:4:85.11:0:0.00:4
3	52443102	gridss54_30o	C	C[3:52443275[	147.83	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.37;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm54-119;BEIDH=2;BEIDL=0;BQ=21.65;BSC=1;BSCQ=21.65;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-18,19;CIRPOS=-18,19;CQ=147.83;EVENT=gridss54_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss54_30h;RAS=0;RASQ=0.00;REF=429;REFPAIR=23;RP=3;RPQ=63.46;SB=0.0;SC=101M8D161M1X36N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.37:4:0:0:0.00:0:0.00:0.00:0:0:21.65:1:21.65:0:0.00:1:0.00:0:0.00:147.83:0.00:429:23:3:63.46:0:0.00:4
3	52443275	gridss54_30h	A	]3:52443102]A	147.83	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=2;BANRPQ=42.05;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm54-119;BEIDH=0;BEIDL=2;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-18,19;CIRPOS=-18,19;CQ=147.83;EVENT=gridss54_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss54_30o;RAS=1;RASQ=84.37;REF=279;REFPAIR=21;RP=3;RPQ=63.46;SB=0.0;SC=1X36N1X197M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:2:42.05:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:147.83:84.37:279:21:3:63.46:0:0.00:4
3	121150789	gridss61_5o	A	A[3:121150951[	187.61	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=104.10;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-13;BEIDH=2;BEIDL=0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-13,13;CQ=187.61;EVENT=gridss61_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_5h;RAS=0;RASQ=0.00;REF=403;REFPAIR=37;RP=4;RPQ=83.50;SB=1.0;SC=101M50D130M1X25N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.10:5:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:187.61:0.00:403:37:4:83.50:0:0.00:5
3	121150951	gridss61_5h	T	]3:121150789]T	187.61	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=4;BANRPQ=83.50;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-13;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-13,13;CQ=187.61;EVENT=gridss61_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_5o;RAS=1;RASQ=104.10;REF=499;REFPAIR=26;RP=4;RPQ=83.50;SC=1X25N1X193M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:4:83.50:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:187.61:104.10:499:26:4:83.50:0:0.00:5
3	121206592	gridss61_15o	A	A[3:121206693[	293.48	LOW_QUAL	AS=1;ASQ=146.74;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-226,asm61-80;BEIDH=449,2;BEIDL=0,0;BQ=21.90;BSC=1;BSCQ=21.90;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-1,2;CQ=293.48;EVENT=gridss61_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_15h;RAS=1;RASQ=0.00;REF=650;REFPAIR=35;RP=7;RPQ=146.74;SB=0.0;SC=448M1X2N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:146.74:7:0:0:0.00:0:0.00:0.00:0:0:21.90:1:21.90:0:0.00:1:0.00:0:0.00:293.48:0.00:650:35:7:146.74:0:0.00:7
3	121206693	gridss61_15h	A	]3:121206592]A	293.48	LOW_QUAL	AS=1;ASQ=0.00;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-226,asm61-80;BEIDH=0,0;BEIDL=449,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-1,2;CQ=293.48;EVENT=gridss61_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_15o;RAS=1;RASQ=146.74;REF=317;REFPAIR=22;RP=7;RPQ=146.74;SC=1X2N1X269M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:7:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:293.48:146.74:317:22:7:146.74:0:0.00:7
3	121207262	gridss61_21o	C	C[3:121207304[	63.68	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=119.82;BSC=5;BSCQ=119.82;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-8,9;CQ=84.35;EVENT=gridss61_21;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_21h;RAS=0;RASQ=0.00;REF=540;REFPAIR=34;RP=3;RPQ=63.68;SB=0.0;SC=101M25D118M1X51N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:119.82:5:119.82:0:0.00:5:0.00:0:0.00:63.68:0.00:540:34:3:63.68:0:0.00:3
3	121207304	gridss61_21h	C	]3:121207262]C	63.68	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=20.35;BSC=1;BSCQ=20.35;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-26,26;CQ=84.35;EVENT=gridss61_21;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_21o;RAS=0;RASQ=0.00;REF=495;REFPAIR=50;RP=3;RPQ=63.68;SB=0.0;SC=1X16N1X154D136M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:21.41:0:0.00:0.00:0:0:20.35:1:20.35:0:0.00:1:0.00:0:0.00:63.68:0.00:495:50:3:63.68:0:0.00:3
3	121207578	gridss61_22o	T	T[3:121207739[	62.84	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-228;BEIDH=214;BEIDL=0;BQ=39.92;BSC=2;BSCQ=39.92;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-48,49;CIRPOS=-4,5;CQ=62.84;EVENT=gridss61_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_22h;RAS=1;RASQ=0.00;REF=418;REFPAIR=16;RP=3;RPQ=62.84;SB=0.5;SC=213M1X96N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:39.92:2:39.92:0:0.00:2:0.00:0:0.00:62.84:0.00:418:16:3:62.84:0:0.00:3
3	121207739	gridss61_22h	T	]3:121207578]T	62.84	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-228;BEIDH=0;BEIDL=214;BQ=20.10;BSC=1;BSCQ=20.10;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-48,49;CQ=62.84;EVENT=gridss61_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_22o;RAS=0;RASQ=0.00;REF=485;REFPAIR=33;RP=3;RPQ=62.84;SB=0.0;SC=1X8N1X112M88D98M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.10:1:20.10:0:0.00:1:0.00:0:0.00:62.84:0.00:485:33:3:62.84:0:0.00:3
3	121207986	gridss61_27o	T	T[3:121208048[	331.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=186.53;ASRP=9;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-79;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-6,7;CQ=309.73;EVENT=gridss61_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_27h;RAS=0;RASQ=0.00;REF=550;REFPAIR=32;RP=7;RPQ=144.53;SC=294M1X12N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=9	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:186.53:9:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:331.06:0.00:550:32:7:144.53:0:0.00:9
3	121208048	gridss61_27h	T	]3:121207986]T	331.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=9;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-79;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-6,7;CQ=309.73;EVENT=gridss61_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_27o;RAS=1;RASQ=186.53;REF=514;REFPAIR=43;RP=7;RPQ=144.53;SC=1X12N1X322M;SR=0;SRQ=0.00;SVTYPE=BND;VF=9	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:9:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:331.06:186.53:514:43:7:144.53:0:0.00:9
3	121208446	gridss61_39o	T	T[3:121208550[	169.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.53;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-86;BEIDH=2;BEIDL=0;BQ=68.27;BSC=3;BSCQ=68.27;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-33,34;CIRPOS=-33,34;CQ=169.06;EVENT=gridss61_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_39h;RAS=0;RASQ=0.00;REF=359;REFPAIR=23;RP=4;RPQ=84.53;SB=0.6666667;SC=240M1X66N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.53:4:0:0:0.00:0:0.00:0.00:0:0:68.27:3:68.27:0:0.00:3:0.00:0:0.00:169.06:0.00:359:23:4:84.53:0:0.00:4
3	121208550	gridss61_39h	A	]3:121208446]A	169.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-86;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-33,34;CIRPOS=-33,34;CQ=169.06;EVENT=gridss61_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_39o;RAS=1;RASQ=84.53;REF=356;REFPAIR=24;RP=4;RPQ=84.53;SC=1X66N1X167M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:169.06:84.53:356:24:4:84.53:0:0.00:4
3	133327532	gridss62_6o	A	A[3:133327603[	62.85	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-15,16;CQ=62.85;EVENT=gridss62_6;IC=0;IMPRECISE;IQ=0.00;PARID=gridss62_6h;RAS=0;RASQ=0.00;REF=178;REFPAIR=14;RP=3;RPQ=62.85;SC=175M16D100M1X15N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.85:0.00:178:14:3:62.85:0:0.00:3
3	133327603	gridss62_6h	T	]3:133327532]T	62.85	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-8,8;CQ=62.85;EVENT=gridss62_6;IC=0;IMPRECISE;IQ=0.00;PARID=gridss62_6o;RAS=0;RASQ=0.00;REF=113;REFPAIR=3;RP=3;RPQ=62.85;SC=1X30N1X171M4D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.85:0.00:113:3:3:62.85:0:0.00:3
3	133337114	gridss62_7o	T	T[3:133337207[	207.56	LOW_QUAL	AS=1;ASQ=103.78;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm62-140,asm62-38;BEIDH=129,2;BEIDL=0,0;BQ=23.05;BSC=1;BSCQ=23.05;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-44,45;CIRPOS=-44,45;CQ=207.56;EVENT=gridss62_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss62_7h;RAS=1;RASQ=0.00;REF=238;REFPAIR=27;RP=5;RPQ=103.78;SB=0.0;SC=218M1X88N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:103.78:5:0:0:0.00:0:0.00:0.00:0:0:23.05:1:23.05:0:0.00:1:0.00:0:0.00:207.56:0.00:238:27:5:103.78:0:0.00:5
3	133337207	gridss62_7h	G	]3:133337114]G	207.56	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm62-140,asm62-38;BEIDH=0,0;BEIDL=129,2;BQ=39.51;BSC=2;BSCQ=39.51;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-44,45;CIRPOS=-44,45;CQ=207.56;EVENT=gridss62_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss62_7o;RAS=1;RASQ=103.78;REF=394;REFPAIR=28;RP=5;RPQ=103.78;SB=1.0;SC=1X88N1X148M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:39.51:2:39.51:0:0.00:2:0.00:0:0.00:207.56:103.78:394:28:5:103.78:0:0.00:5
3	142168990	gridss63_9o	G	G[3:142169091[	147.80	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.38;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-50;BEIDH=2;BEIDL=0;BQ=29.24;BSC=1;BSCQ=29.24;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-45,45;CIRPOS=-45,45;CQ=126.76;EVENT=gridss63_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_9h;RAS=0;RASQ=0.00;REF=241;REFPAIR=22;RP=4;RPQ=84.42;SB=0.0;SC=156M8D100M1X89N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.38:3:0:0:0.00:0:0.00:0.00:0:0:29.24:1:29.24:0:0.00:1:0.00:0:0.00:147.80:0.00:241:22:4:84.42:0:0.00:4
3	142169091	gridss63_9h	C	]3:142168990]C	147.80	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.45;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-50;BEIDH=0;BEIDL=2;BQ=144.28;BSC=6;BSCQ=144.28;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-45,45;CIRPOS=-45,45;CQ=126.76;EVENT=gridss63_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_9o;RAS=1;RASQ=63.38;REF=351;REFPAIR=27;RP=4;RPQ=84.42;SB=0.5;SC=1X89N1X135M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.45:0:0.00:0.00:0:0:144.28:6:144.28:0:0.00:5:0.00:0:0.00:147.80:63.38:351:27:4:84.42:0:0.00:4
3	142169937	gridss63_15o	T	T[3:142170044[	125.57	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.78;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-47;BEIDH=2;BEIDL=0;BQ=54.18;BSC=2;BSCQ=54.18;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-19,20;CQ=125.57;EVENT=gridss63_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_15h;RAS=0;RASQ=0.00;REF=352;REFPAIR=26;RP=3;RPQ=62.78;SB=0.0;SC=101M9D158M1X38N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.78:3:0:0:0.00:0:0.00:0.00:0:0:54.18:2:54.18:0:0.00:2:0.00:0:0.00:125.57:0.00:352:26:3:62.78:0:0.00:3
3	142170044	gridss63_15h	C	]3:142169937]C	125.57	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=41.37;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-47;BEIDH=0;BEIDL=2;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-19,20;CQ=125.57;EVENT=gridss63_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_15o;RAS=1;RASQ=62.78;REF=426;REFPAIR=36;RP=3;RPQ=62.78;SB=1.0;SC=1X38N1X166M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:41.37:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:125.57:62.78:426:36:3:62.78:0:0.00:3
3	142170331	gridss63_19o	A	A[3:142170461[	63.01	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-813;BEIDH=214;BEIDL=0;BQ=68.29;BSC=3;BSCQ=68.29;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-80,80;CIRPOS=-10,11;CQ=63.01;EVENT=gridss63_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_19h;RAS=1;RASQ=0.00;REF=127;REFPAIR=9;RP=3;RPQ=63.01;SB=0.0;SC=213M1X159N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:68.29:3:68.29:0:0.00:3:0.00:0:0.00:63.01:0.00:127:9:3:63.01:0:0.00:3
3	142170461	gridss63_19h	G	]3:142170331]G	63.01	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-813;BEIDH=0;BEIDL=214;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-80,80;CQ=63.01;EVENT=gridss63_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_19o;RAS=0;RASQ=0.00;REF=28;REFPAIR=4;RP=3;RPQ=63.01;SC=1X20N1X118M67D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.01:0.00:28:4:3:63.01:0:0.00:3
3	142176647	gridss63_25o	A	A[3:142176700[	63.58	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-11,12;CQ=63.58;EVENT=gridss63_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_25h;RAS=0;RASQ=0.00;REF=145;REFPAIR=6;RP=3;RPQ=63.58;SC=175M31D100M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.58:0.00:145:6:3:63.58:0:0.00:3
3	142176700	gridss63_25h	C	]3:142176647]C	63.58	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,12;CIRPOS=0,1;CQ=63.58;EVENT=gridss63_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_25o;RAS=0;RASQ=0.00;REF=178;REFPAIR=12;RP=3;RPQ=63.58;SC=1X22N1X100M32D152M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.58:0.00:178:12:3:63.58:0:0.00:3
3	142177028	gridss63_28o	C	C[3:142177164[	147.20	LOW_QUAL	AS=1;ASQ=62.91;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-76,asm63-844;BEIDH=2,180;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-10,11;CQ=147.20;EVENT=gridss63_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_28h;RAS=1;RASQ=0.00;REF=344;REFPAIR=16;RP=4;RPQ=84.29;SC=101M21D179M1X5N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.91:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.20:0.00:344:16:4:84.29:0:0.00:4
3	142177164	gridss63_28h	C	]3:142177028]C	147.20	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-76,asm63-844;BEIDH=0,0;BEIDL=2,180;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-3,3;CQ=147.20;EVENT=gridss63_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_28o;RAS=1;RASQ=62.91;REF=578;REFPAIR=35;RP=4;RPQ=84.29;SC=1X20N1X242M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.20:62.91:578:35:4:84.29:0:0.00:4
3	142181912	gridss63_36o	G	G[3:142181972[	83.18	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-865;BEIDH=110;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-41,41;CQ=83.18;EVENT=gridss63_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_36h;RAS=1;RASQ=0.00;REF=273;REFPAIR=33;RP=4;RPQ=83.18;SC=101M62D143M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:83.18:0.00:273:33:4:83.18:0:0.00:4
3	142181972	gridss63_36h	A	]3:142181912]A	83.18	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-865;BEIDH=0;BEIDL=110;BQ=22.77;BSC=1;BSCQ=22.77;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-41,41;CIRPOS=0,1;CQ=83.18;EVENT=gridss63_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_36o;RAS=0;RASQ=0.00;REF=143;REFPAIR=13;RP=4;RPQ=83.18;SB=0.0;SC=1X81N1X100M1D124M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:22.77:1:22.77:0:0.00:1:0.00:0:0.00:83.18:0.00:143:13:4:83.18:0:0.00:4
3	142184883	gridss63_298b	A	AAACAAATTGAAAAAAAAAAAAGAATAAAGGTA.	145.43	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=51.00;BASRP=0;BASSR=3;BEID=asm63-108;BEIDH=-1;BEIDL=0;BQ=145.43;BSC=4;BSCQ=94.43;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=121.59;EVENT=gridss63_298;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=32;REFPAIR=5;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:51.00:0:3:145.43:4:94.43:0:0.00:4:0.00:0:0.00:0.00:0.00:32:5:0:0.00:0:0.00:0
3	142189037	gridss63_44o	T	T[3:142189081[	63.34	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-1,1;CQ=63.34;EVENT=gridss63_44;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_44h;RAS=0;RASQ=0.00;REF=228;REFPAIR=20;RP=3;RPQ=63.34;SC=101M27D160M1X18N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.34:0.00:228:20:3:63.34:0:0.00:3
3	142189081	gridss63_44h	C	]3:142189037]C	63.34	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=31.64;BSC=1;BSCQ=31.64;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-9,10;CQ=63.34;EVENT=gridss63_44;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_44o;RAS=0;RASQ=0.00;REF=172;REFPAIR=12;RP=3;RPQ=63.34;SB=0.0;SC=1X1N1X100M83D122M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:31.64:1:31.64:0:0.00:1:0.00:0:0.00:63.34:0.00:172:12:3:63.34:0:0.00:3
3	142219706	gridss63_69o	A	A[3:142219820[	251.08	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=125.54;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-241;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-13,14;CQ=251.08;EVENT=gridss63_69;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_69h;RAS=0;RASQ=0.00;REF=302;REFPAIR=26;RP=6;RPQ=125.54;SC=280M1X26N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:125.54:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:251.08:0.00:302:26:6:125.54:0:0.00:6
3	142219820	gridss63_69h	G	]3:142219706]G	251.08	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=6;BANRPQ=125.54;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-241;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-13,14;CQ=251.08;EVENT=gridss63_69;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_69o;RAS=1;RASQ=125.54;REF=427;REFPAIR=27;RP=6;RPQ=125.54;SC=1X26N1X209M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:6:125.54:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:251.08:125.54:427:27:6:125.54:0:0.00:6
3	142221693	gridss63_78o	A	A[3:142221778[	148.09	LOW_QUAL	AS=1;ASQ=63.53;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.02;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1013,asm63-254;BEIDH=202,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-43,44;CQ=148.09;EVENT=gridss63_78;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_78h;RAS=1;RASQ=0.00;REF=414;REFPAIR=26;RP=4;RPQ=84.56;SC=296M1X10N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.53:3:0:1:21.02:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:148.09:0.00:414:26:4:84.56:0:0.00:4
3	142221778	gridss63_78h	G	]3:142221693]G	148.09	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.02;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1013,asm63-254;BEIDH=0,0;BEIDL=202,2;BQ=38.77;BSC=2;BSCQ=38.77;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-43,44;CIRPOS=-5,6;CQ=148.09;EVENT=gridss63_78;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_78o;RAS=1;RASQ=63.53;REF=426;REFPAIR=25;RP=4;RPQ=84.56;SB=0.5;SC=1X86N1X220M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.02:0:0.00:0.00:0:0:38.77:2:38.77:0:0.00:2:0.00:0:0.00:148.09:63.53:426:25:4:84.56:0:0.00:4
3	142231079	gridss63_471b	A	AGAAAAAGAAGTGCTAATTTACCCTTTGTTTCTACCTTTTTTTTTTTTCATTTGCTTTGTGGTCATTTTTTTACT.	669.62	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=213.76;BASRP=0;BASSR=7;BEID=asm63-297,asm63-298;BEIDH=-1,-1;BEIDL=0,0;BQ=669.62;BSC=17;BSCQ=455.86;BUM=0;BUMQ=0.00;BVF=17;CAS=0;CASQ=0.00;CQ=263.18;EVENT=gridss63_471;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=93;REFPAIR=20;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:213.76:0:7:669.62:17:455.86:0:0.00:17:0.00:0:0.00:0.00:0.00:93:20:0:0.00:0:0.00:0
3	142234499	gridss63_90o	T	T[3:142234542[	62.73	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=41.75;BSC=2;BSCQ=41.75;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-23,24;CIRPOS=-1,2;CQ=62.73;EVENT=gridss63_90;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_90h;RAS=0;RASQ=0.00;REF=429;REFPAIR=23;RP=3;RPQ=62.73;SB=0.5;SC=57M53D117M1X46N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:41.75:2:41.75:0:0.00:2:0.00:0:0.00:62.73:0.00:429:23:3:62.73:0:0.00:3
3	142234542	gridss63_90h	A	]3:142234499]A	62.73	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-23,24;CQ=62.73;EVENT=gridss63_90;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_90o;RAS=0;RASQ=0.00;REF=378;REFPAIR=30;RP=3;RPQ=62.73;SB=0.0;SC=1X2N1X100M68D136M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:62.73:0.00:378:30:3:62.73:0:0.00:3
3	142236297	gridss63_92o	T	T[3:142236381[	167.39	LOW_QUAL	AS=1;ASQ=83.70;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1084,asm63-338;BEIDH=240,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-34,34;CQ=167.39;EVENT=gridss63_92;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_92h;RAS=1;RASQ=0.00;REF=272;REFPAIR=16;RP=4;RPQ=83.70;SC=239M1X67N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.70:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.39:0.00:272:16:4:83.70:0:0.00:4
3	142236381	gridss63_92h	A	]3:142236297]A	167.39	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1084,asm63-338;BEIDH=0,0;BEIDL=240,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-34,34;CQ=167.39;EVENT=gridss63_92;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_92o;RAS=1;RASQ=83.70;REF=454;REFPAIR=34;RP=4;RPQ=83.70;SC=1X67N1X174M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.39:83.70:454:34:4:83.70:0:0.00:4
3	142241693	gridss63_1116b	A	.TAGCTCCACTAATAAACCAAAGGAAAAGCTTTAATCCTCTACTCCCGTTTCAAGCCAAA	220.55	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=28.68;BASRP=0;BASSR=1;BEID=asm63-1092;BEIDH=-1;BEIDL=58;BQ=220.55;BSC=7;BSCQ=191.87;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=187.27;EVENT=gridss63_1116;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=167;REFPAIR=17;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:28.68:0:1:220.55:7:191.87:0:0.00:7:0.00:0:0.00:0.00:0.00:167:17:0:0.00:0:0.00:0
3	142252870	gridss63_107o	T	T[3:142252956[	146.78	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.68;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-408;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-6,7;CQ=146.78;EVENT=gridss63_107;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_107h;RAS=0;RASQ=0.00;REF=268;REFPAIR=19;RP=4;RPQ=84.09;SC=243M1X63N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.68:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.78:0.00:268:19:4:84.09:0:0.00:4
3	142252956	gridss63_107h	A	]3:142252870]A	146.78	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-408;BEIDH=0;BEIDL=2;BQ=29.24;BSC=1;BSCQ=29.24;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-32,32;CQ=146.78;EVENT=gridss63_107;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_107o;RAS=1;RASQ=62.68;REF=264;REFPAIR=20;RP=4;RPQ=84.09;SB=0.0;SC=1X12N1X294M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:29.24:1:29.24:0:0.00:1:0.00:0:0.00:146.78:62.68:264:20:4:84.09:0:0.00:4
3	142253571	gridss63_115o	A	A[3:142253701[	209.64	LOW_QUAL	AS=1;ASQ=83.41;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1143,asm63-410;BEIDH=144,2;BEIDL=0,0;BQ=19.00;BSC=1;BSCQ=19.00;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-53,53;CIRPOS=-4,5;CQ=209.64;EVENT=gridss63_115;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_115h;RAS=1;RASQ=0.00;REF=174;REFPAIR=9;RP=6;RPQ=126.23;SB=0.0;SC=201M1X105N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.41:4:0:0:0.00:0:0.00:0.00:0:0:19.00:1:19.00:0:0.00:1:0.00:0:0.00:209.64:0.00:174:9:6:126.23:0:0.00:7
3	142253701	gridss63_115h	A	]3:142253571]A	209.64	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1143,asm63-410;BEIDH=0,0;BEIDL=144,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-53,53;CQ=209.64;EVENT=gridss63_115;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_115o;RAS=1;RASQ=83.41;REF=272;REFPAIR=20;RP=6;RPQ=126.23;SC=1X8N1X157M1D140M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:209.64:83.41:272:20:6:126.23:0:0.00:7
3	142256942	gridss63_124o	C	C[3:142257024[	84.67	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=25.82;BSC=1;BSCQ=25.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-18,19;CIRPOS=-24,24;CQ=84.67;EVENT=gridss63_124;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_124h;RAS=0;RASQ=0.00;REF=265;REFPAIR=17;RP=4;RPQ=84.67;SB=1.0;SC=101M16D153M1X36N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:25.82:1:25.82:0:0.00:1:0.00:0:0.00:84.67:0.00:265:17:4:84.67:0:0.00:4
3	142257024	gridss63_124h	C	]3:142256942]C	84.67	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=4;BANRPQ=84.67;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-18,19;CQ=84.67;EVENT=gridss63_124;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_124o;RAS=0;RASQ=0.00;REF=243;REFPAIR=26;RP=4;RPQ=84.67;SC=1X47N1X259M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:4:84.67:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.67:0.00:243:26:4:84.67:0:0.00:4
3	142260530	gridss63_133o	T	T[3:142260687[	124.55	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.27;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-465;BEIDH=2;BEIDL=0;BQ=28.37;BSC=1;BSCQ=28.37;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-16,16;CQ=124.55;EVENT=gridss63_133;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_133h;RAS=0;RASQ=0.00;REF=275;REFPAIR=19;RP=3;RPQ=62.27;SB=0.0;SC=101M48D126M1X31N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.27:3:0:0:0.00:0:0.00:0.00:0:0:28.37:1:28.37:0:0.00:1:0.00:0:0.00:124.55:0.00:275:19:3:62.27:0:0.00:3
3	142260687	gridss63_133h	A	]3:142260530]A	124.55	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-465;BEIDH=0;BEIDL=2;BQ=27.36;BSC=1;BSCQ=27.36;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-16,16;CQ=124.55;EVENT=gridss63_133;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_133o;RAS=1;RASQ=62.27;REF=209;REFPAIR=14;RP=3;RPQ=62.27;SB=0.0;SC=1X31N1X175M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:27.36:1:27.36:0:0.00:1:0.00:0:0.00:124.55:62.27:209:14:3:62.27:0:0.00:3
3	142261361	gridss63_139o	C	C[3:142261433[	62.75	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-17,18;CQ=62.75;EVENT=gridss63_139;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_139h;RAS=0;RASQ=0.00;REF=390;REFPAIR=31;RP=3;RPQ=62.75;SC=101M47D124M1X34N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.75:0.00:390:31:3:62.75:0:0.00:3
3	142261433	gridss63_139h	T	]3:142261361]T	62.75	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIRPOS=-17,18;CQ=62.75;EVENT=gridss63_139;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_139o;RAS=0;RASQ=0.00;REF=416;REFPAIR=26;RP=3;RPQ=62.75;SC=1X199M7D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.75:0.00:416:26:3:62.75:0:0.00:3
3	142263484	gridss63_625b	A	AAAACCTGGGAAAAAGAAGCACCTAAAGGTTTTTGAACCCCATAAAAAATTTGTCTTT.	531	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=183.09;BASRP=0;BASSR=7;BEID=asm63-493;BEIDH=-1;BEIDL=0;BQ=531.00;BSC=14;BSCQ=347.91;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=414.82;EVENT=gridss63_625;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=71;REFPAIR=11;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:183.09:0:7:531.00:14:347.91:0:0.00:14:0.00:0:0.00:0.00:0.00:71:11:0:0.00:0:0.00:0
3	142266639	gridss63_143o	T	T[3:142266847[	127.23	LOW_QUAL	AS=1;ASQ=63.62;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1235,asm63-530;BEIDH=164,2;BEIDL=13,0;BQ=101.94;BSC=4;BSCQ=101.94;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-40,41;CIRPOS=-14,14;CQ=127.23;EVENT=gridss63_143;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_143h;RAS=1;RASQ=0.00;REF=363;REFPAIR=16;RP=3;RPQ=63.61;SB=0.75;SC=151M40D25M1X80N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.62:3:0:0:0.00:0:0.00:0.00:0:0:101.94:4:101.94:0:0.00:3:0.00:0:0.00:127.23:0.00:363:16:3:63.61:0:0.00:4
3	142266847	gridss63_143h	G	]3:142266639]G	127.23	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1235,asm63-530;BEIDH=13,0;BEIDL=164,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-40,41;CQ=127.23;EVENT=gridss63_143;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_143o;RAS=1;RASQ=63.62;REF=223;REFPAIR=12;RP=3;RPQ=63.61;SC=1X27N1X100M18D133M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.23:63.62:223:12:3:63.61:0:0.00:4
3	142268696	gridss63_148o	C	C[3:142268811[	128.02	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=64.01;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-529;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-32,33;CQ=128.02;EVENT=gridss63_148;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_148h;RAS=0;RASQ=0.00;REF=168;REFPAIR=12;RP=3;RPQ=64.01;SC=101M9D132M1X64N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.01:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:128.02:0.00:168:12:3:64.01:0:0.00:3
3	142268811	gridss63_148h	A	]3:142268696]A	128.02	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-529;BEIDH=0;BEIDL=2;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-32,33;CQ=128.02;EVENT=gridss63_148;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_148o;RAS=1;RASQ=64.01;REF=264;REFPAIR=19;RP=3;RPQ=64.01;SB=1.0;SC=1X64N1X198M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:128.02:64.01:264:19:3:64.01:0:0.00:3
3	142268918	gridss63_150o	G	G[3:142269081[	191.27	LOW_QUAL	AS=1;ASQ=84.93;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1234,asm63-528;BEIDH=219,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-44,45;CIRPOS=-1,2;CQ=191.27;EVENT=gridss63_150;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_150h;RAS=1;RASQ=0.00;REF=255;REFPAIR=20;RP=5;RPQ=106.34;SC=218M1X88N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.93:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:191.27:0.00:255:20:5:106.34:0:0.00:5
3	142269081	gridss63_150h	C	]3:142268918]C	191.27	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1234,asm63-528;BEIDH=0,0;BEIDL=219,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-44,45;CQ=191.27;EVENT=gridss63_150;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_150o;RAS=1;RASQ=84.93;REF=424;REFPAIR=20;RP=5;RPQ=106.34;SC=1X2N1X304M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:191.27:84.93:424:20:5:106.34:0:0.00:5
3	142280923	gridss63_704b	G	GTAGTCCAGACT.	344.62	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=172.31;BASRP=0;BASSR=9;BEID=asm63-587;BEIDH=-1;BEIDL=0;BQ=344.62;BSC=9;BSCQ=172.31;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=344.62;EVENT=gridss63_704;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=123;REFPAIR=20;RP=0;RPQ=0.00;SB=0.11111111;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:172.31:0:9:344.62:9:172.31:0:0.00:9:0.00:0:0.00:0.00:0.00:123:20:0:0.00:0:0.00:0
3	142280926	gridss63_1271b	C	.AATAGTGTAGTC	117.40	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=58.70;BASRP=0;BASSR=3;BEID=asm63-1299;BEIDH=-1;BEIDL=11;BQ=117.40;BSC=3;BSCQ=58.70;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=117.40;EVENT=gridss63_1271;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=120;REFPAIR=20;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:58.70:0:3:117.40:3:58.70:0:0.00:3:0.00:0:0.00:0.00:0.00:120:20:0:0.00:0:0.00:0
3	142280936	gridss63_170o	C	C[3:142280984[	62.83	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=27.36;BSC=1;BSCQ=27.36;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-4,4;CQ=62.83;EVENT=gridss63_170;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_170h;RAS=0;RASQ=0.00;REF=60;REFPAIR=9;RP=3;RPQ=62.83;SB=0.0;SC=229M1X77N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:27.36:1:27.36:0:0.00:1:0.00:0:0.00:62.83:0.00:60:9:3:62.83:0:0.00:3
3	142280984	gridss63_170h	T	]3:142280936]T	62.83	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-39,39;CQ=62.83;EVENT=gridss63_170;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_170o;RAS=0;RASQ=0.00;REF=58;REFPAIR=9;RP=3;RPQ=62.83;SC=1X7N1X176M22D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.83:0.00:58:9:3:62.83:0:0.00:3
3	142281628	gridss63_174o	C	C[3:142281801[	127.94	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.97;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-601;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-7,7;CQ=127.94;EVENT=gridss63_174;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_174h;RAS=0;RASQ=0.00;REF=344;REFPAIR=17;RP=3;RPQ=63.97;SC=101M52D140M1X13N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.97:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.94:0.00:344:17:3:63.97:0:0.00:3
3	142281801	gridss63_174h	T	]3:142281628]T	127.94	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-601;BEIDH=0;BEIDL=2;BQ=37.08;BSC=1;BSCQ=37.08;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-7,7;CQ=127.94;EVENT=gridss63_174;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_174o;RAS=1;RASQ=63.97;REF=404;REFPAIR=23;RP=3;RPQ=63.97;SB=1.0;SC=1X13N1X196M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:37.08:1:37.08:0:0.00:1:0.00:0:0.00:127.94:63.97:404:23:3:63.97:0:0.00:3
3	142284927	gridss63_178o	C	C[3:142285005[	251.43	LOW_QUAL	AS=1;ASQ=125.71;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1344,asm63-640;BEIDH=279,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,15;CIRPOS=-14,15;CQ=251.43;EVENT=gridss63_178;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_178h;RAS=1;RASQ=0.00;REF=391;REFPAIR=31;RP=6;RPQ=125.71;SC=278M1X28N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:125.71:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:251.43:0.00:391:31:6:125.71:0:0.00:6
3	142285005	gridss63_178h	C	]3:142284927]C	251.43	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1344,asm63-640;BEIDH=0,0;BEIDL=279,2;BQ=29.24;BSC=1;BSCQ=29.24;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-14,15;CIRPOS=-14,15;CQ=251.43;EVENT=gridss63_178;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_178o;RAS=1;RASQ=125.71;REF=406;REFPAIR=30;RP=6;RPQ=125.71;SB=1.0;SC=1X28N1X258M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:29.24:1:29.24:0:0.00:1:0.00:0:0.00:251.43:125.71:406:30:6:125.71:0:0.00:6
3	142296550	gridss63_192o	T	T[3:142296604[	84.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1389;BEIDH=271;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-5,5;CQ=84.29;EVENT=gridss63_192;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_192h;RAS=1;RASQ=0.00;REF=296;REFPAIR=18;RP=4;RPQ=84.29;SC=270M1X67N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.29:0.00:296:18:4:84.29:0:0.00:4
3	142296604	gridss63_192h	A	]3:142296550]A	84.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1389;BEIDH=0;BEIDL=271;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-34,34;CQ=84.29;EVENT=gridss63_192;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_192o;RAS=0;RASQ=0.00;REF=360;REFPAIR=25;RP=4;RPQ=84.29;SC=1X9N1X297M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.29:0.00:360:25:4:84.29:0:0.00:4
3	178867261	gridss67_9o	T	T[3:178867363[	189.51	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.05;ASRP=4;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-57;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-31,31;CIRPOS=-13,13;CQ=168.42;EVENT=gridss67_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_9h;RAS=0;RASQ=0.00;REF=506;REFPAIR=26;RP=5;RPQ=105.46;SC=245M1X61N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.05:4:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:189.51:0.00:506:26:5:105.46:0:0.00:5
3	178867303	gridss67_11o	G	G[3:178867482[	105.60	LOW_QUAL	AS=1;ASQ=84.19;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-55,asm67-689;BEIDH=2,264;BEIDL=0,0;BQ=26.40;BSC=1;BSCQ=26.40;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-55,55;CIRPOS=-35,35;CQ=148.36;EVENT=gridss67_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_11h;RAS=1;RASQ=0.00;REF=477;REFPAIR=25;RP=1;RPQ=21.41;SB=0.0;SC=263M1X109N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.19:4:0:0:0.00:0:0.00:0.00:0:0:26.40:1:26.40:0:0.00:1:0.00:0:0.00:105.60:0.00:477:25:1:21.41:0:0.00:4
3	178867363	gridss67_9h	A	]3:178867261]A	189.51	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=5;BANRPQ=105.46;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-57;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-31,31;CQ=168.42;EVENT=gridss67_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_9o;RAS=1;RASQ=84.05;REF=472;REFPAIR=25;RP=5;RPQ=105.46;SC=1X25N1X281M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:5:105.46:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:189.51:84.05:472:25:5:105.46:0:0.00:5
3	178867482	gridss67_11h	G	]3:178867303]G	105.60	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-55,asm67-689;BEIDH=0,0;BEIDL=2,264;BQ=47.17;BSC=2;BSCQ=47.17;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-55,55;CQ=148.36;EVENT=gridss67_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_11o;RAS=1;RASQ=84.19;REF=494;REFPAIR=45;RP=1;RPQ=21.41;SB=1.0;SC=1X69N1X39D222M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:47.17:2:47.17:0:0.00:2:0.00:0:0.00:105.60:84.19:494:45:1:21.41:0:0.00:4
3	178867804	gridss67_773b	T	.TTCGTTTTTAATTTTTTTTTT	225.66	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=59.63;BASRP=0;BASSR=3;BEID=asm67-646;BEIDH=-1;BEIDL=20;BQ=225.66;BSC=8;BSCQ=166.03;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=205.69;EVENT=gridss67_773;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=319;REFPAIR=28;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:59.63:0:3:225.66:8:166.03:0:0.00:8:0.00:0:0.00:0.00:0.00:319:28:0:0.00:0:0.00:0
3	178874656	gridss67_29o	A	A[3:178874697[	251.34	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=146.97;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-85;BEIDH=1;BEIDL=0;BQ=25.03;BSC=1;BSCQ=25.03;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CQ=230.54;EVENT=gridss67_29;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_29h;RAS=0;RASQ=0.00;REF=540;REFPAIR=32;RP=5;RPQ=104.37;SB=0.0;SC=103M23D181M1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:146.97:7:0:0:0.00:0:0.00:0.00:0:0:25.03:1:25.03:0:0.00:1:0.00:0:0.00:251.34:0.00:540:32:5:104.37:0:0.00:8
3	178874697	gridss67_29h	A	]3:178874656]A	251.34	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=7;ASSR=0;BA=0;BANRP=5;BANRPQ=104.37;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-85;BEIDH=0;BEIDL=1;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=230.54;EVENT=gridss67_29;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_29o;RAS=1;RASQ=146.97;REF=557;REFPAIR=39;RP=5;RPQ=104.37;SC=1X351M;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:7:0:5:104.37:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:251.34:146.97:557:39:5:104.37:0:0.00:8
3	178874911	gridss67_33o	G	G[3:178875131[	126.54	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.71;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-86;BEIDH=2;BEIDL=0;BQ=40.40;BSC=1;BSCQ=40.40;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-56,56;CIRPOS=-56,56;CQ=126.54;EVENT=gridss67_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_33h;RAS=0;RASQ=0.00;REF=263;REFPAIR=20;RP=2;RPQ=42.82;SB=0.0;SC=195M1X111N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.71:4:0:0:0.00:0:0.00:0.00:0:0:40.40:1:40.40:0:0.00:1:0.00:0:0.00:126.54:0.00:263:20:2:42.82:0:0.00:4
3	178875131	gridss67_33h	A	]3:178874911]A	126.54	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-86;BEIDH=0;BEIDL=2;BQ=47.14;BSC=2;BSCQ=47.14;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-56,56;CIRPOS=-56,56;CQ=126.54;EVENT=gridss67_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_33o;RAS=1;RASQ=83.71;REF=152;REFPAIR=14;RP=2;RPQ=42.82;SB=0.0;SC=1X111N1X209M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:47.14:2:47.14:0:0.00:2:0.00:0:0.00:126.54:83.71:152:14:2:42.82:0:0.00:4
3	178876647	gridss67_39o	T	T[3:178876680[	269.48	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=206.91;ASRP=10;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-106;BEIDH=2;BEIDL=0;BQ=20.53;BSC=1;BSCQ=20.53;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-10,10;CIRPOS=-10,10;CQ=393.30;EVENT=gridss67_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_39h;RAS=0;RASQ=0.00;REF=703;REFPAIR=53;RP=3;RPQ=62.57;SB=0.0;SC=140M147D1X19N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=10	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:206.91:10:0:0:0.00:0:0.00:0.00:0:0:20.53:1:20.53:0:0.00:1:0.00:0:0.00:269.48:0.00:703:53:3:62.57:0:0.00:10
3	178876680	gridss67_39h	T	]3:178876647]T	269.48	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=10;ASSR=0;BA=0;BANRP=3;BANRPQ=62.57;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-106;BEIDH=0;BEIDL=2;BQ=47.01;BSC=2;BSCQ=47.01;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-10,10;CIRPOS=-10,10;CQ=393.30;EVENT=gridss67_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_39o;RAS=1;RASQ=206.91;REF=654;REFPAIR=46;RP=3;RPQ=62.57;SB=0.5;SC=1X19N1X310M;SR=0;SRQ=0.00;SVTYPE=BND;VF=10	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:10:0:3:62.57:0:0.00:0.00:0:0:47.01:2:47.01:0:0.00:2:0.00:0:0.00:269.48:206.91:654:46:3:62.57:0:0.00:10
3	178876851	gridss67_49o	A	A[3:178876967[	213.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=106.96;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-107;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-43,44;CIRPOS=-43,44;CQ=192.60;EVENT=gridss67_49;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_49h;RAS=0;RASQ=0.00;REF=212;REFPAIR=19;RP=5;RPQ=106.96;SC=220M1X86N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.96:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:213.91:0.00:212:19:5:106.96:0:0.00:5
3	178876967	gridss67_49h	T	]3:178876851]T	213.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=4;BANRPQ=85.65;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-107;BEIDH=0;BEIDL=2;BQ=32.06;BSC=1;BSCQ=32.06;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-43,44;CIRPOS=-43,44;CQ=192.60;EVENT=gridss67_49;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_49o;RAS=1;RASQ=106.96;REF=215;REFPAIR=24;RP=5;RPQ=106.96;SB=1.0;SC=1X86N1X274M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:4:85.65:0:0.00:0.00:0:0:32.06:1:32.06:0:0.00:1:0.00:0:0.00:213.91:106.96:215:24:5:106.96:0:0.00:5
3	178878741	gridss67_858b	T	.TTACATAGTT	573.65	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=286.82;BASRP=0;BASSR=15;BEID=asm67-731;BEIDH=-1;BEIDL=9;BQ=573.65;BSC=15;BSCQ=286.82;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=573.65;EVENT=gridss67_858;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=466;REFPAIR=42;RP=0;RPQ=0.00;SB=0.6;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:286.82:0:15:573.65:15:286.82:0:0.00:14:0.00:0:0.00:0.00:0.00:466:42:0:0.00:0:0.00:0
3	178878744	gridss67_309b	T	TTAGTAGGCA.	556.69	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=268.56;BASRP=0;BASSR=14;BEID=asm67-110;BEIDH=-1;BEIDL=0;BQ=556.69;BSC=15;BSCQ=288.13;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=537.12;EVENT=gridss67_309;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=452;REFPAIR=41;RP=0;RPQ=0.00;SB=0.37931034;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:268.56:0:14:556.69:15:288.13:0:0.00:15:0.00:0:0.00:0.00:0.00:452:41:0:0.00:0:0.00:0
3	178884401	gridss67_61o	C	C[3:178884508[	169.47	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.74;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-173;BEIDH=2;BEIDL=0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-34,35;CIRPOS=-34,35;CQ=169.47;EVENT=gridss67_61;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_61h;RAS=0;RASQ=0.00;REF=344;REFPAIR=29;RP=4;RPQ=84.74;SB=1.0;SC=102M19D117M1X68N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.74:4:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:169.47:0.00:344:29:4:84.74:0:0.00:4
3	178884508	gridss67_61h	A	]3:178884401]A	169.47	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-173;BEIDH=0;BEIDL=2;BQ=44.21;BSC=2;BSCQ=44.21;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-34,35;CIRPOS=-34,35;CQ=169.47;EVENT=gridss67_61;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_61o;RAS=1;RASQ=84.74;REF=366;REFPAIR=16;RP=4;RPQ=84.74;SB=0.5;SC=1X68N1X209M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:44.21:2:44.21:0:0.00:2:0.00:0:0.00:169.47:84.74:366:16:4:84.74:0:0.00:4
3	178897985	gridss67_75o	G	G[3:178898099[	169.77	LOW_QUAL	AS=1;ASQ=63.64;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-257,asm67-889;BEIDH=2,175;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-66,67;CIRPOS=-4,5;CQ=169.77;EVENT=gridss67_75;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_75h;RAS=1;RASQ=0.00;REF=536;REFPAIR=32;RP=5;RPQ=106.14;SC=174M1X132N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.64:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:169.77:0.00:536:32:5:106.14:0:0.00:5
3	178898099	gridss67_75h	A	]3:178897985]A	169.77	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-257,asm67-889;BEIDH=0,0;BEIDL=2,175;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-66,67;CQ=169.77;EVENT=gridss67_75;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_75o;RAS=1;RASQ=63.64;REF=584;REFPAIR=22;RP=5;RPQ=106.14;SC=1X8N1X192M5D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:169.77:63.64:584:22:5:106.14:0:0.00:5
3	178901453	gridss67_93o	A	A[3:178901500[	207.68	LOW_QUAL	AS=1;ASQ=103.84;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-249,asm67-885;BEIDH=2,267;BEIDL=0,0;BQ=23.85;BSC=1;BSCQ=23.85;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-20,21;CQ=207.68;EVENT=gridss67_93;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_93h;RAS=1;RASQ=0.00;REF=101;REFPAIR=12;RP=5;RPQ=103.84;SB=1.0;SC=266M1X40N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:103.84:5:0:0:0.00:0:0.00:0.00:0:0:23.85:1:23.85:0:0.00:1:0.00:0:0.00:207.68:0.00:101:12:5:103.84:0:0.00:5
3	178901500	gridss67_93h	A	]3:178901453]A	207.68	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-249,asm67-885;BEIDH=0,0;BEIDL=2,267;BQ=38.51;BSC=1;BSCQ=38.51;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-20,21;CQ=207.68;EVENT=gridss67_93;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_93o;RAS=1;RASQ=103.84;REF=159;REFPAIR=17;RP=5;RPQ=103.84;SB=1.0;SC=1X40N1X223M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:38.51:1:38.51:0:0.00:1:0.00:0:0.00:207.68:103.84:159:17:5:103.84:0:0.00:5
3	178902781	gridss67_103o	C	C[3:178902941[	128.14	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=64.07;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-255;BEIDH=2;BEIDL=0;BQ=66.71;BSC=3;BSCQ=66.71;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-38,38;CIRPOS=-38,38;CQ=128.14;EVENT=gridss67_103;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_103h;RAS=0;RASQ=0.00;REF=401;REFPAIR=20;RP=3;RPQ=64.07;SB=0.33333334;SC=120M11D100M1X75N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.07:3:0:0:0.00:0:0.00:0.00:0:0:66.71:3:66.71:0:0.00:3:0.00:0:0.00:128.14:0.00:401:20:3:64.07:0:0.00:3
3	178902941	gridss67_103h	T	]3:178902781]T	128.14	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-255;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-38,38;CIRPOS=-38,38;CQ=128.14;EVENT=gridss67_103;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_103o;RAS=1;RASQ=64.07;REF=200;REFPAIR=8;RP=3;RPQ=64.07;SC=1X75N1X138M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.82:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:128.14:64.07:200:8:3:64.07:0:0.00:3
3	178904233	gridss67_104o	A	A[3:178904400[	191.67	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.73;ASRP=4;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-292;BEIDH=2;BEIDL=0;BQ=47.69;BSC=2;BSCQ=47.69;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-12,13;CQ=191.67;EVENT=gridss67_104;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_104h;RAS=0;RASQ=0.00;REF=348;REFPAIR=18;RP=5;RPQ=106.95;SB=0.0;SC=265M1X41N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.73:4:0:1:21.41:0:0.00:0.00:0:0:47.69:2:47.69:0:0.00:2:0.00:0:0.00:191.67:0.00:348:18:5:106.95:0:0.00:6
3	178904400	gridss67_104h	G	]3:178904233]G	191.67	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=5;BANRPQ=106.95;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-292;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-21,21;CQ=191.67;EVENT=gridss67_104;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_104o;RAS=1;RASQ=84.73;REF=521;REFPAIR=36;RP=5;RPQ=106.95;SC=1X24N1X282M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:5:106.95:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:191.67:84.73:521:36:5:106.95:0:0.00:6
3	178904402	gridss67_107o	A	A[3:178904578[	127.33	LOW_QUAL	AS=1;ASQ=84.51;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-293,asm67-925;BEIDH=2,157;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-16,17;CIRPOS=-16,17;CQ=148.74;EVENT=gridss67_107;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_107h;RAS=1;RASQ=0.00;REF=521;REFPAIR=36;RP=2;RPQ=42.82;SC=126M1X32N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.51:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.33:0.00:521:36:2:42.82:0:0.00:4
3	178904560	gridss67_109o	G	G[3:178904716[	63.10	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=63.10;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=82.99;BSC=3;BSCQ=82.99;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-1,1;CQ=84.51;EVENT=gridss67_109;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_109h;RAS=0;RASQ=0.00;REF=666;REFPAIR=44;RP=3;RPQ=63.10;SB=0.33333334;SC=212M1X64N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:63.10:0:0.00:0.00:0:0:82.99:3:82.99:0:0.00:3:0.00:0:0.00:63.10:0.00:666:44:3:63.10:0:0.00:3
3	178904578	gridss67_107h	C	]3:178904402]C	127.33	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-293,asm67-925;BEIDH=0,0;BEIDL=2,157;BQ=20.10;BSC=1;BSCQ=20.10;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-16,17;CIRPOS=-16,17;CQ=148.74;EVENT=gridss67_107;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_107o;RAS=1;RASQ=84.51;REF=666;REFPAIR=57;RP=2;RPQ=42.82;SB=1.0;SC=1X32N1X247M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:20.10:1:20.10:0:0.00:1:0.00:0:0.00:127.33:84.51:666:57:2:42.82:0:0.00:4
3	178904716	gridss67_109h	A	]3:178904560]A	63.10	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-32,33;CQ=84.51;EVENT=gridss67_109;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_109o;RAS=0;RASQ=0.00;REF=560;REFPAIR=37;RP=3;RPQ=63.10;SC=1X1N1X24D101M40D140M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.10:0.00:560:37:3:63.10:0:0.00:3
3	178908440	gridss67_480b	C	CGTTAAT.	151.35	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=75.67;BASRP=0;BASSR=4;BEID=asm67-297;BEIDH=-1;BEIDL=0;BQ=151.35;BSC=4;BSCQ=75.67;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=151.35;EVENT=gridss67_480;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=78;REFPAIR=6;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:75.67:0:4:151.35:4:75.67:0:0.00:4:0.00:0:0.00:0.00:0.00:78:6:0:0.00:0:0.00:0
3	178911146	gridss67_120o	G	G[3:178911362[	127.90	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.95;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-324;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-9,10;CQ=127.90;EVENT=gridss67_120;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_120h;RAS=0;RASQ=0.00;REF=364;REFPAIR=27;RP=3;RPQ=63.95;SC=101M55D132M1X18N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.95:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.90:0.00:364:27:3:63.95:0:0.00:3
3	178911362	gridss67_120h	A	]3:178911146]A	127.90	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-324;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-9,10;CQ=127.90;EVENT=gridss67_120;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_120o;RAS=1;RASQ=63.95;REF=78;REFPAIR=8;RP=3;RPQ=63.95;SC=1X18N1X154M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.90:63.95:78:8:3:63.95:0:0.00:3
3	178912817	gridss67_498b	A	ACACAAAGGAGAGATAGAAAACAAGAAATTCTTAACAACTACACAGTAAATGGGGATAGAG.	559.60	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=77.06;BASRP=0;BASSR=3;BEID=asm67-338;BEIDH=-1;BEIDL=0;BQ=559.60;BSC=19;BSCQ=482.54;BUM=0;BUMQ=0.00;BVF=19;CAS=0;CASQ=0.00;CQ=304.65;EVENT=gridss67_498;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=77;REFPAIR=9;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:77.06:0:3:559.60:19:482.54:0:0.00:19:0.00:0:0.00:0.00:0.00:77:9:0:0.00:0:0.00:0
3	178913819	gridss67_124o	A	A[3:178913974[	149.17	LOW_QUAL	AS=1;ASQ=63.88;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-380,asm67-987;BEIDH=2,112;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-58,59;CQ=149.17;EVENT=gridss67_124;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_124h;RAS=1;RASQ=0.00;REF=228;REFPAIR=24;RP=4;RPQ=85.29;SC=246M1X63N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.88:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:149.17:0.00:228:24:4:85.29:0:0.00:4
3	178913974	gridss67_124h	T	]3:178913819]T	149.17	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-380,asm67-987;BEIDH=0,0;BEIDL=2,112;BQ=46.73;BSC=2;BSCQ=46.73;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-58,59;CIRPOS=-32,32;CQ=149.17;EVENT=gridss67_124;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_124o;RAS=1;RASQ=63.88;REF=226;REFPAIR=16;RP=4;RPQ=85.29;SB=0.5;SC=1X116N1X190M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:46.73:2:46.73:0:0.00:2:0.00:0:0.00:149.17:63.88:226:16:4:85.29:0:0.00:4
3	178913992	gridss67_127o	T	T[3:178914109[	127.09	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.54;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-379;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-13,14;CQ=148.50;EVENT=gridss67_127;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_127h;RAS=0;RASQ=0.00;REF=243;REFPAIR=25;RP=3;RPQ=63.54;SC=154M1X2N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.54:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.09:0.00:243:25:3:63.54:0:0.00:3
3	178914109	gridss67_127h	T	]3:178913992]T	127.09	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-379;BEIDH=0;BEIDL=2;BQ=47.44;BSC=2;BSCQ=47.44;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-1,2;CQ=148.50;EVENT=gridss67_127;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_127o;RAS=1;RASQ=63.54;REF=303;REFPAIR=24;RP=3;RPQ=63.54;SB=0.5;SC=1X26N1X109D142M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:47.44:2:47.44:0:0.00:2:0.00:0:0.00:127.09:63.54:303:24:3:63.54:0:0.00:3
3	178915813	gridss67_129o	T	T[3:178915902[	249.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=124.92;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-378;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-17,17;CQ=249.91;EVENT=gridss67_129;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_129h;RAS=0;RASQ=0.00;REF=195;REFPAIR=14;RP=6;RPQ=124.99;SC=263M1X43N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:124.92:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:249.91:0.00:195:14:6:124.99:0:0.00:7
3	178915902	gridss67_129h	A	]3:178915813]A	249.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=6;BANRPQ=124.99;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-378;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-22,22;CQ=249.91;EVENT=gridss67_129;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_129o;RAS=1;RASQ=124.92;REF=99;REFPAIR=14;RP=6;RPQ=124.99;SC=1X33N1X271M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:6:124.99:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:249.91:124.92:99:14:6:124.99:0:0.00:7
3	178921254	gridss67_1096b	T	.ATATGTAAAT	421.29	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=191.28;BASRP=0;BASSR=10;BEID=asm67-1011;BEIDH=-1;BEIDL=9;BQ=421.29;BSC=12;BSCQ=230.01;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=401.72;EVENT=gridss67_1096;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=197;REFPAIR=15;RP=0;RPQ=0.00;SB=0.8181818;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:191.28:0:10:421.29:12:230.01:0:0.00:12:0.00:0:0.00:0.00:0.00:197:15:0:0.00:0:0.00:0
3	178921255	gridss67_576b	A	AAATAGTCAT.	191.43	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=95.72;BASRP=0;BASSR=5;BEID=asm67-401;BEIDH=-1;BEIDL=0;BQ=191.43;BSC=5;BSCQ=95.72;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=191.43;EVENT=gridss67_576;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=207;REFPAIR=13;RP=0;RPQ=0.00;SB=0.4;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:95.72:0:5:191.43:5:95.72:0:0.00:5:0.00:0:0.00:0.00:0.00:207:13:0:0.00:0:0.00:0
3	178925324	gridss67_591b	T	TTTCTTTTCT.	152.81	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=76.41;BASRP=0;BASSR=4;BEID=asm67-460;BEIDH=-1;BEIDL=0;BQ=152.81;BSC=4;BSCQ=76.41;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=173.17;EVENT=gridss67_591;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=27;REFPAIR=6;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:76.41:0:4:152.81:4:76.41:0:0.00:4:0.00:0:0.00:0.00:0.00:27:6:0:0.00:0:0.00:0
3	178941152	gridss67_171o	A	A[3:178941214[	63.63	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-39,39;CQ=63.63;EVENT=gridss67_171;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_171h;RAS=0;RASQ=0.00;REF=376;REFPAIR=24;RP=3;RPQ=63.63;SB=1.0;SC=122M58D100M1X26N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:63.63:0.00:376:24:3:63.63:0:0.00:3
3	178941214	gridss67_171h	A	]3:178941152]A	63.63	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=44.20;BSC=2;BSCQ=44.20;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-13,14;CQ=63.63;EVENT=gridss67_171;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_171o;RAS=0;RASQ=0.00;REF=384;REFPAIR=27;RP=3;RPQ=63.63;SB=1.0;SC=1X77N1X118M10D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:44.20:2:44.20:0:0.00:2:0.00:0:0.00:63.63:0.00:384:27:3:63.63:0:0.00:3
3	178942267	gridss67_657b	C	CAATTTGTTGG.	195.14	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=97.57;BASRP=0;BASSR=5;BEID=asm67-518;BEIDH=-1;BEIDL=0;BQ=195.14;BSC=5;BSCQ=97.57;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=195.14;EVENT=gridss67_657;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=44;REFPAIR=3;RP=0;RPQ=0.00;SB=0.2;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:97.57:0:5:195.14:5:97.57:0:0.00:5:0.00:0:0.00:0.00:0.00:44:3:0:0.00:0:0.00:0
3	178944635	gridss67_188o	T	T[3:178944739[	269.99	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=145.70;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-581;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=249.45;EVENT=gridss67_188;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_188h;RAS=0;RASQ=0.00;REF=576;REFPAIR=37;RP=6;RPQ=124.29;SC=290M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:145.70:7:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:269.99:0.00:576:37:6:124.29:0:0.00:7
3	178944739	gridss67_188h	G	]3:178944635]G	269.99	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=7;ASSR=0;BA=0;BANRP=5;BANRPQ=102.88;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-581;BEIDH=0;BEIDL=2;BQ=84.32;BSC=3;BSCQ=84.32;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=249.45;EVENT=gridss67_188;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_188o;RAS=1;RASQ=145.70;REF=376;REFPAIR=37;RP=6;RPQ=124.29;SB=0.33333334;SC=1X16N1X245M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:7:0:5:102.88:0:0.00:0.00:0:0:84.32:3:84.32:0:0.00:3:0.00:0:0.00:269.99:145.70:376:37:6:124.29:0:0.00:7
3	191856717	gridss68_37b	T	.CATTATTTGT	715.21	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=343.92;BASRP=0;BASSR=18;BEID=asm68-29;BEIDH=-1;BEIDL=9;BQ=715.21;BSC=19;BSCQ=371.28;BUM=0;BUMQ=0.00;BVF=18;CAS=0;CASQ=0.00;CQ=687.85;EVENT=gridss68_37;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=155;REFPAIR=7;RP=0;RPQ=0.00;SB=0.5135135;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:343.92:0:18:715.21:19:371.28:0:0.00:18:0.00:0:0.00:0.00:0.00:155:7:0:0.00:0:0.00:0
4	55598236	gridss74_43b	T	TTTTTTTGAGATCAGAGC.	420.87	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=81.75;BASRP=0;BASSR=4;BEID=asm74-27;BEIDH=-1;BEIDL=0;BQ=420.87;BSC=14;BSCQ=339.12;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=163.50;EVENT=gridss74_43;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=83;REFPAIR=9;RP=0;RPQ=0.00;SB=0.8333333;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:81.75:0:4:420.87:14:339.12:0:0.00:14:0.00:0:0.00:0.00:0.00:83:9:0:0.00:0:0.00:0
4	71215902	gridss76_6b	A	AAACCAA.	112.70	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=56.35;BASRP=0;BASSR=3;BEID=asm76-4;BEIDH=-1;BEIDL=0;BQ=112.70;BSC=3;BSCQ=56.35;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=112.70;EVENT=gridss76_6;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=34;REFPAIR=1;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:56.35:0:3:112.70:3:56.35:0:0.00:3:0.00:0:0.00:0.00:0.00:34:1:0:0.00:0:0.00:0
4	80932465	gridss77_70b	C	CATCTATCT.	152.30	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=76.15;BASRP=0;BASSR=4;BEID=asm77-2;BEIDH=-1;BEIDL=0;BQ=152.30;BSC=4;BSCQ=76.15;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=152.30;EVENT=gridss77_70;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=81;REFPAIR=14;RP=0;RPQ=0.00;SB=0.25;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:76.15:0:4:152.30:4:76.15:0:0.00:3:0.00:0:0.00:0.00:0.00:81:14:0:0.00:0:0.00:0
4	84373409	gridss77_9o	A	A[4:84373496[	147.92	LOW_QUAL	AS=1;ASQ=63.26;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-305,asm77-69;BEIDH=201,2;BEIDL=0,0;BQ=62.17;BSC=3;BSCQ=62.17;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-53,54;CIRPOS=-18,19;CQ=147.92;EVENT=gridss77_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_9h;RAS=1;RASQ=0.00;REF=174;REFPAIR=10;RP=4;RPQ=84.67;SB=0.6666667;SC=200M1X106N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.26:3:0:0:0.00:0:0.00:0.00:0:0:62.17:3:62.17:0:0.00:3:0.00:0:0.00:147.92:0.00:174:10:4:84.67:0:0.00:4
4	84373496	gridss77_9h	C	]4:84373409]C	147.92	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-305,asm77-69;BEIDH=0,0;BEIDL=201,2;BQ=39.74;BSC=2;BSCQ=39.74;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-18,19;CIRPOS=-53,54;CQ=147.92;EVENT=gridss77_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_9o;RAS=1;RASQ=63.26;REF=355;REFPAIR=28;RP=4;RPQ=84.67;SB=1.0;SC=1X36N1X155M14D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:39.74:2:39.74:0:0.00:2:0.00:0:0.00:147.92:63.26:355:28:4:84.67:0:0.00:4
4	84374162	gridss77_11o	A	A[4:84374197[	228.61	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=103.89;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-67;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-3,3;CQ=228.61;EVENT=gridss77_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_11h;RAS=0;RASQ=0.00;REF=507;REFPAIR=42;RP=6;RPQ=124.72;SC=174M28D100M1X4N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:103.89:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:228.61:0.00:507:42:6:124.72:0:0.00:6
4	84374197	gridss77_11h	G	]4:84374162]G	228.61	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=4;BANRPQ=83.03;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-67;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-2,3;CQ=228.61;EVENT=gridss77_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_11o;RAS=1;RASQ=103.89;REF=515;REFPAIR=35;RP=6;RPQ=124.72;SC=1X5N1X301M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:4:83.03:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:228.61:103.89:515:35:6:124.72:0:0.00:6
4	84382835	gridss77_22o	C	C[4:84383012[	211.26	LOW_QUAL	AS=1;ASQ=105.63;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-102,asm77-334;BEIDH=2,204;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=211.26;EVENT=gridss77_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_22h;RAS=1;RASQ=0.00;REF=584;REFPAIR=46;RP=5;RPQ=105.63;SC=298M1X8N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.63:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:211.26:0.00:584:46:5:105.63:0:0.00:5
4	84383012	gridss77_22h	T	]4:84382835]T	211.26	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-102,asm77-334;BEIDH=0,0;BEIDL=2,204;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=211.26;EVENT=gridss77_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_22o;RAS=1;RASQ=105.63;REF=263;REFPAIR=18;RP=5;RPQ=105.63;SC=1X8N1X194M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:211.26:105.63:263:18:5:105.63:0:0.00:5
4	84383380	gridss77_23o	A	A[4:84383475[	166.87	LOW_QUAL	AS=1;ASQ=83.44;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-103,asm77-335;BEIDH=2,172;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-29,29;CQ=166.87;EVENT=gridss77_23;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_23h;RAS=1;RASQ=0.00;REF=71;REFPAIR=6;RP=4;RPQ=83.44;SC=249M1X57N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.44:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:166.87:0.00:71:6:4:83.44:0:0.00:4
4	84383475	gridss77_23h	A	]4:84383380]A	166.87	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-103,asm77-335;BEIDH=0,0;BEIDL=2,172;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-29,29;CQ=166.87;EVENT=gridss77_23;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_23o;RAS=1;RASQ=83.44;REF=207;REFPAIR=7;RP=4;RPQ=83.44;SB=1.0;SC=1X57N1X193M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:166.87:83.44:207:7:4:83.44:0:0.00:4
4	84385625	gridss77_27o	A	A[4:84385758[	64.07	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-337;BEIDH=167;BEIDL=0;BQ=59.31;BSC=2;BSCQ=59.31;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-70,71;CIRPOS=-4,5;CQ=64.07;EVENT=gridss77_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_27h;RAS=1;RASQ=0.00;REF=136;REFPAIR=6;RP=3;RPQ=64.07;SB=0.0;SC=166M1X140N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:21.41:0:0.00:0.00:0:0:59.31:2:59.31:0:0.00:2:0.00:0:0.00:64.07:0.00:136:6:3:64.07:0:0.00:3
4	84385758	gridss77_27h	T	]4:84385625]T	64.07	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-337;BEIDH=0;BEIDL=167;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-70,71;CQ=64.07;EVENT=gridss77_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_27o;RAS=0;RASQ=0.00;REF=556;REFPAIR=24;RP=3;RPQ=64.07;SC=1X8N1X183M14D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.07:0.00:556:24:3:64.07:0:0.00:3
4	84391918	gridss77_35o	A	A[4:84392004[	232.23	LOW_QUAL	AS=1;ASQ=105.57;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-136,asm77-384;BEIDH=2,122;BEIDL=0,0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-37,38;CIRPOS=-4,4;CQ=232.23;EVENT=gridss77_35;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_35h;RAS=1;RASQ=0.00;REF=268;REFPAIR=25;RP=6;RPQ=126.66;SB=0.0;SC=232M1X74N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.57:5:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:232.23:0.00:268:25:6:126.66:0:0.00:6
4	84392004	gridss77_35h	T	]4:84391918]T	232.23	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-136,asm77-384;BEIDH=0,0;BEIDL=2,122;BQ=23.05;BSC=1;BSCQ=23.05;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-37,38;CQ=232.23;EVENT=gridss77_35;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_35o;RAS=1;RASQ=105.57;REF=387;REFPAIR=23;RP=6;RPQ=126.66;SB=1.0;SC=1X7N1X296M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:23.05:1:23.05:0:0.00:1:0.00:0:0.00:232.23:105.57:387:23:6:126.66:0:0.00:6
4	84397630	gridss77_39o	A	A[4:84397710[	148.45	LOW_QUAL	AS=1;ASQ=63.60;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-191,asm77-430;BEIDH=2,268;BEIDL=0,0;BQ=19.56;BSC=1;BSCQ=19.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-21,22;CIRPOS=-9,9;CQ=148.45;EVENT=gridss77_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_39h;RAS=1;RASQ=0.00;REF=152;REFPAIR=8;RP=4;RPQ=84.85;SB=1.0;SC=267M1X42N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.60:3:0:0:0.00:0:0.00:0.00:0:0:19.56:1:19.56:0:0.00:1:0.00:0:0.00:148.45:0.00:152:8:4:84.85:0:0.00:4
4	84397710	gridss77_39h	A	]4:84397630]A	148.45	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-191,asm77-430;BEIDH=0,0;BEIDL=2,268;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-21,22;CQ=148.45;EVENT=gridss77_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_39o;RAS=1;RASQ=63.60;REF=150;REFPAIR=17;RP=4;RPQ=84.85;SB=1.0;SC=1X17N1X232M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:148.45:63.60:150:17:4:84.85:0:0.00:4
4	84399143	gridss77_45o	T	T[4:84399212[	206.56	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=103.28;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-181;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-14,14;CQ=206.56;EVENT=gridss77_45;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_45h;RAS=0;RASQ=0.00;REF=600;REFPAIR=48;RP=5;RPQ=103.28;SC=279M1X27N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:103.28:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:206.56:0.00:600:48:5:103.28:0:0.00:5
4	84399212	gridss77_45h	C	]4:84399143]C	206.56	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=5;BANRPQ=103.28;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-181;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-14,14;CQ=206.56;EVENT=gridss77_45;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_45o;RAS=1;RASQ=103.28;REF=642;REFPAIR=45;RP=5;RPQ=103.28;SC=1X27N1X234M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:5:103.28:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:206.56:103.28:642:45:5:103.28:0:0.00:5
4	84399329	gridss77_46o	T	T[4:84399538[	106.41	LOW_QUAL	AS=1;ASQ=63.59;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-182,asm77-433;BEIDH=2,227;BEIDL=0,0;BQ=27.54;BSC=1;BSCQ=27.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-74,75;CIRPOS=-74,75;CQ=106.41;EVENT=gridss77_46;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_46h;RAS=1;RASQ=0.00;REF=529;REFPAIR=36;RP=2;RPQ=42.82;SB=0.0;SC=226M1X148N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.59:3:0:0:0.00:0:0.00:0.00:0:0:27.54:1:27.54:0:0.00:1:0.00:0:0.00:106.41:0.00:529:36:2:42.82:0:0.00:3
4	84399538	gridss77_46h	T	]4:84399329]T	106.41	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-182,asm77-433;BEIDH=0,0;BEIDL=2,227;BQ=77.28;BSC=3;BSCQ=77.28;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-74,75;CIRPOS=-74,75;CQ=106.41;EVENT=gridss77_46;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_46o;RAS=1;RASQ=63.59;REF=392;REFPAIR=18;RP=2;RPQ=42.82;SB=0.6666667;SC=1X148N1X173M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:77.28:3:77.28:0:0.00:3:0.00:0:0.00:106.41:63.59:392:18:2:42.82:0:0.00:3
4	84399859	gridss77_50o	G	G[4:84399895[	62.70	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-10,10;CIRPOS=-23,23;CQ=62.70;EVENT=gridss77_50;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_50h;RAS=0;RASQ=0.00;REF=494;REFPAIR=40;RP=3;RPQ=62.70;SC=115M72D100M1X19N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.70:0.00:494:40:3:62.70:0:0.00:3
4	84399895	gridss77_50h	C	]4:84399859]C	62.70	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=82.08;BSC=3;BSCQ=82.08;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-10,10;CQ=62.70;EVENT=gridss77_50;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_50o;RAS=0;RASQ=0.00;REF=451;REFPAIR=30;RP=3;RPQ=62.70;SB=0.6666667;SC=1X45N1X115M45D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:82.08:3:82.08:0:0.00:3:0.00:0:0.00:62.70:0.00:451:30:3:62.70:0:0.00:3
4	84404431	gridss77_498b	T	.CCTAAGTACCAAGTTTTTTGAGCAACTAAGAGTGTAAAATT	269	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=68.66;BASRP=0;BASSR=3;BEID=asm77-453;BEIDH=-1;BEIDL=40;BQ=269.00;BSC=8;BSCQ=200.34;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=137.32;EVENT=gridss77_498;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=102;REFPAIR=16;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:68.66:0:3:269.00:8:200.34:0:0.00:8:0.00:0:0.00:0.00:0.00:102:16:0:0.00:0:0.00:0
4	84405672	gridss77_62o	T	T[4:84405754[	166.84	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.42;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-231;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-39,39;CQ=166.84;EVENT=gridss77_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_62h;RAS=0;RASQ=0.00;REF=381;REFPAIR=13;RP=4;RPQ=83.42;SC=229M1X77N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.42:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:166.84:0.00:381:13:4:83.42:0:0.00:4
4	84405754	gridss77_62h	C	]4:84405672]C	166.84	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-231;BEIDH=0;BEIDL=2;BQ=32.58;BSC=1;BSCQ=32.58;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-39,39;CQ=166.84;EVENT=gridss77_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_62o;RAS=1;RASQ=83.42;REF=302;REFPAIR=24;RP=4;RPQ=83.42;SB=1.0;SC=1X77N1X156M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:32.58:1:32.58:0:0.00:1:0.00:0:0.00:166.84:83.42:302:24:4:83.42:0:0.00:4
4	140534144	gridss83_16b	C	.TTATCCAATC	270.06	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=135.03;BASRP=0;BASSR=7;BEID=asm83-14;BEIDH=-1;BEIDL=9;BQ=270.06;BSC=7;BSCQ=135.03;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=270.06;EVENT=gridss83_16;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=246;REFPAIR=23;RP=0;RPQ=0.00;SB=0.2857143;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:135.03:0:7:270.06:7:135.03:0:0.00:7:0.00:0:0.00:0.00:0.00:246:23:0:0.00:0:0.00:0
4	140534169	gridss83_4b	A	AATCAGGGTG.	365.41	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=171.88;BASRP=0;BASSR=9;BEID=asm83-1;BEIDH=-1;BEIDL=0;BQ=365.41;BSC=10;BSCQ=193.53;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=343.77;EVENT=gridss83_4;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=216;REFPAIR=17;RP=0;RPQ=0.00;SB=0.42105263;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:171.88:0:9:365.41:10:193.53:0:0.00:10:0.00:0:0.00:0.00:0.00:216:17:0:0.00:0:0.00:0
4	148379484	gridss83_28b	C	.ATTTTGTAAAGTC	271.83	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=135.92;BASRP=0;BASSR=7;BEID=asm83-26;BEIDH=-1;BEIDL=12;BQ=271.83;BSC=7;BSCQ=135.92;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=271.83;EVENT=gridss83_28;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=8;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:135.92:0:7:271.83:7:135.92:0:0.00:7:0.00:0:0.00:0.00:0.00:8:0:0:0.00:0:0.00:0
4	167645180	gridss85_8b	A	AGGCCTA.	170.66	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=75.67;BASRP=0;BASSR=4;BEID=asm85-5;BEIDH=-1;BEIDL=0;BQ=170.66;BSC=5;BSCQ=94.98;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=151.35;EVENT=gridss85_8;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=34;REFPAIR=6;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:75.67:0:4:170.66:5:94.98:0:0.00:5:0.00:0:0.00:0.00:0.00:34:6:0:0.00:0:0.00:0
4	171966095	gridss86_27b	A	.GAAACAGAGA	139.31	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=58.13;BASRP=0;BASSR=3;BEID=asm86-21;BEIDH=-1;BEIDL=9;BQ=139.31;BSC=4;BSCQ=81.18;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=116.26;EVENT=gridss86_27;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=82;REFPAIR=14;RP=0;RPQ=0.00;SB=0.2857143;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:58.13:0:3:139.31:4:81.18:0:0.00:4:0.00:0:0.00:0.00:0.00:82:14:0:0.00:0:0.00:0
4	175889944	gridss86_16b	A	AGCTTAATGTAATT.	163.32	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=59.77;BASRP=0;BASSR=3;BEID=asm86-8;BEIDH=-1;BEIDL=0;BQ=163.32;BSC=5;BSCQ=103.55;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=119.54;EVENT=gridss86_16;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=102;REFPAIR=8;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:59.77:0:3:163.32:5:103.55:0:0.00:5:0.00:0:0.00:0.00:0.00:102:8:0:0.00:0:0.00:0
5	62197281	gridss94_7b	T	TATTTTTCTTT.	214.37	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=94.47;BASRP=0;BASSR=5;BEID=asm94-5;BEIDH=-1;BEIDL=0;BQ=214.37;BSC=6;BSCQ=119.91;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=188.93;EVENT=gridss94_7;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=255;REFPAIR=11;RP=0;RPQ=0.00;SB=0.27272728;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:94.47:0:5:214.37:6:119.91:0:0.00:6:0.00:0:0.00:0.00:0.00:255:11:0:0.00:0:0.00:0
5	74808328	gridss95_7o	T	T[5:74808405[	230.38	LOW_QUAL	AS=1;ASQ=104.63;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm95-173,asm95-55;BEIDH=263,2;BEIDL=0,0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-22,23;CIRPOS=-22,23;CQ=230.38;EVENT=gridss95_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss95_7h;RAS=1;RASQ=0.00;REF=409;REFPAIR=32;RP=6;RPQ=125.75;SB=0.0;SC=262M1X44N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.63:5:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:230.38:0.00:409:32:6:125.75:0:0.00:6
5	74808405	gridss95_7h	G	]5:74808328]G	230.38	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm95-173,asm95-55;BEIDH=0,0;BEIDL=263,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,23;CIRPOS=-22,23;CQ=230.38;EVENT=gridss95_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss95_7o;RAS=1;RASQ=104.63;REF=509;REFPAIR=25;RP=6;RPQ=125.75;SC=1X44N1X215M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:230.38:104.63:509:25:6:125.75:0:0.00:6
5	74892593	gridss95_18o	T	T[5:74892662[	125.50	LOW_QUAL	AS=1;ASQ=62.75;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm95-124,asm95-248;BEIDH=2,187;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-12,13;CQ=167.35;EVENT=gridss95_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss95_18h;RAS=1;RASQ=0.00;REF=193;REFPAIR=19;RP=3;RPQ=62.75;SC=187M119D2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.75:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.50:0.00:193:19:3:62.75:0:0.00:3
5	74892662	gridss95_18h	G	]5:74892593]G	125.50	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm95-124,asm95-248;BEIDH=0,0;BEIDL=2,187;BQ=20.35;BSC=1;BSCQ=20.35;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=0,1;CQ=167.35;EVENT=gridss95_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss95_18o;RAS=1;RASQ=62.75;REF=258;REFPAIR=18;RP=3;RPQ=62.75;SB=1.0;SC=1X24N1X151M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:20.35:1:20.35:0:0.00:1:0.00:0:0.00:125.50:62.75:258:18:3:62.75:0:0.00:3
5	74892744	gridss95_19o	T	T[5:74892796[	167.96	LOW_QUAL	AS=1;ASQ=63.06;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm95-122,asm95-246;BEIDH=2,216;BEIDL=0,0;BQ=40.32;BSC=2;BSCQ=40.32;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-36,37;CIRPOS=-10,11;CQ=167.96;EVENT=gridss95_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss95_19h;RAS=1;RASQ=0.00;REF=423;REFPAIR=26;RP=5;RPQ=104.90;SB=0.5;SC=215M1X72N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.06:3:0:0:0.00:0:0.00:0.00:0:0:40.32:2:40.32:0:0.00:2:0.00:0:0.00:167.96:0.00:423:26:5:104.90:0:0.00:5
5	74892796	gridss95_19h	A	]5:74892744]A	167.96	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm95-122,asm95-246;BEIDH=0,0;BEIDL=2,216;BQ=39.99;BSC=2;BSCQ=39.99;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-36,37;CQ=167.96;EVENT=gridss95_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss95_19o;RAS=1;RASQ=63.06;REF=493;REFPAIR=24;RP=5;RPQ=104.90;SB=1.0;SC=1X20N1X290M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:39.99:2:39.99:0:0.00:2:0.00:0:0.00:167.96:63.06:493:24:5:104.90:0:0.00:5
5	82554475	gridss96_3o	A	A[5:82554623[	126.10	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.05;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm96-17;BEIDH=2;BEIDL=0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-33,33;CIRPOS=-33,33;CQ=126.10;EVENT=gridss96_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss96_3h;RAS=0;RASQ=0.00;REF=112;REFPAIR=10;RP=3;RPQ=63.05;SB=0.0;SC=101M34D106M1X65N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.05:3:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:126.10:0.00:112:10:3:63.05:0:0.00:3
5	82554623	gridss96_3h	T	]5:82554475]T	126.10	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm96-17;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-33,33;CIRPOS=-33,33;CQ=126.10;EVENT=gridss96_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss96_3o;RAS=1;RASQ=63.05;REF=28;REFPAIR=3;RP=3;RPQ=63.05;SC=1X65N1X208M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.10:63.05:28:3:3:63.05:0:0.00:3
5	131915152	gridss101_2o	A	A[5:131915246[	63.73	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-2,2;CQ=63.73;EVENT=gridss101_2;IC=0;IMPRECISE;IQ=0.00;PARID=gridss101_2h;RAS=0;RASQ=0.00;REF=289;REFPAIR=32;RP=3;RPQ=63.73;SB=0.0;SC=101M77D115M1X13N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:63.73:0.00:289:32:3:63.73:0:0.00:3
5	131915246	gridss101_2h	T	]5:131915152]T	63.73	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-7,7;CQ=63.73;EVENT=gridss101_2;IC=0;IMPRECISE;IQ=0.00;PARID=gridss101_2o;RAS=0;RASQ=0.00;REF=120;REFPAIR=8;RP=3;RPQ=63.73;SC=1X3N1X100M42D161M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.73:0.00:120:8:3:63.73:0:0.00:3
5	131978121	gridss101_12o	T	T[5:131978203[	106.01	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.21;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm101-112;BEIDH=2;BEIDL=0;BQ=26.25;BSC=1;BSCQ=26.25;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-27,28;CQ=147.22;EVENT=gridss101_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss101_12h;RAS=0;RASQ=0.00;REF=214;REFPAIR=24;RP=2;RPQ=42.81;SB=1.0;SC=115M175D1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.21:3:0:0:0.00:0:0.00:0.00:0:0:26.25:1:26.25:0:0.00:1:0.00:0:0.00:106.01:0.00:214:24:2:42.81:0:0.00:3
5	131978203	gridss101_12h	T	]5:131978121]T	106.01	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm101-112;BEIDH=0;BEIDL=2;BQ=44.01;BSC=2;BSCQ=44.01;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-27,28;CIRPOS=-8,9;CQ=147.22;EVENT=gridss101_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss101_12o;RAS=1;RASQ=63.21;REF=309;REFPAIR=15;RP=2;RPQ=42.81;SB=0.0;SC=1X54N1X163M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:44.01:2:44.01:0:0.00:2:0.00:0:0.00:106.01:63.21:309:15:2:42.81:0:0.00:3
5	131978330	gridss101_15o	C	C[5:131978369[	311.56	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=145.38;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm101-108;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-9,10;CQ=290.76;EVENT=gridss101_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss101_15h;RAS=0;RASQ=0.00;REF=515;REFPAIR=35;RP=8;RPQ=166.18;SC=308M1X18N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:145.38:7:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:311.56:0.00:515:35:8:166.18:0:0.00:8
5	131978369	gridss101_15h	A	]5:131978330]A	311.56	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=7;ASSR=0;BA=0;BANRP=7;BANRPQ=145.93;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm101-108;BEIDH=0;BEIDL=2;BQ=26.25;BSC=1;BSCQ=26.25;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-9,10;CQ=290.76;EVENT=gridss101_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss101_15o;RAS=1;RASQ=145.38;REF=452;REFPAIR=24;RP=8;RPQ=166.18;SB=0.0;SC=1X18N1X255M;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:7:0:7:145.93:0:0.00:0.00:0:0:26.25:1:26.25:0:0.00:1:0.00:0:0.00:311.56:145.38:452:24:8:166.18:0:0.00:8
5	131978601	gridss101_18o	T	T[5:131978648[	209.08	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=104.54;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm101-109;BEIDH=2;BEIDL=0;BQ=29.48;BSC=1;BSCQ=29.48;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-27,27;CIRPOS=-18,18;CQ=209.08;EVENT=gridss101_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss101_18h;RAS=0;RASQ=0.00;REF=473;REFPAIR=33;RP=5;RPQ=104.54;SB=0.0;SC=253M1X53N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.54:5:0:0:0.00:0:0.00:0.00:0:0:29.48:1:29.48:0:0.00:1:0.00:0:0.00:209.08:0.00:473:33:5:104.54:0:0.00:5
5	131978648	gridss101_18h	T	]5:131978601]T	209.08	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=4;BANRPQ=83.86;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm101-109;BEIDH=0;BEIDL=2;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-27,27;CQ=209.08;EVENT=gridss101_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss101_18o;RAS=1;RASQ=104.54;REF=466;REFPAIR=33;RP=5;RPQ=104.54;SB=0.0;SC=1X35N1X271M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:4:83.86:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:209.08:104.54:466:33:5:104.54:0:0.00:5
5	131979872	gridss101_24o	G	G[5:131979971[	85.19	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm101-217;BEIDH=172;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-25,26;CIRPOS=-55,56;CQ=85.19;EVENT=gridss101_24;IC=0;IMPRECISE;IQ=0.00;PARID=gridss101_24h;RAS=1;RASQ=0.00;REF=340;REFPAIR=22;RP=4;RPQ=85.19;SC=256M1X50N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:85.19:0.00:340:22:4:85.19:0:0.00:4
5	131979971	gridss101_24h	G	]5:131979872]G	85.19	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm101-217;BEIDH=0;BEIDL=172;BQ=82.69;BSC=4;BSCQ=82.69;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-55,56;CIRPOS=-25,26;CQ=85.19;EVENT=gridss101_24;IC=0;IMPRECISE;IQ=0.00;PARID=gridss101_24o;RAS=0;RASQ=0.00;REF=533;REFPAIR=26;RP=4;RPQ=85.19;SB=0.75;SC=1X110N1X196M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:82.69:4:82.69:0:0.00:4:0.00:0:0.00:85.19:0.00:533:26:4:85.19:0:0.00:4
5	172421761	gridss105_127b	T	.ATTTGCTAGTTTTTTTATTGCATTTTTCT	381.80	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=22.94;BASRP=0;BASSR=1;BEID=asm105-105;BEIDH=-1;BEIDL=28;BQ=381.80;BSC=15;BSCQ=358.86;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=191.55;EVENT=gridss105_127;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=238;REFPAIR=17;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:22.94:0:1:381.80:15:358.86:0:0.00:15:0.00:0:0.00:0.00:0.00:238:17:0:0.00:0:0.00:0
5	172421774	gridss105_27b	T	TAGTGTTATCTTTAACAT.	248.62	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=60.50;BASRP=0;BASSR=3;BEID=asm105-14;BEIDH=-1;BEIDL=0;BQ=248.62;BSC=8;BSCQ=188.12;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=178.07;EVENT=gridss105_27;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=232;REFPAIR=9;RP=0;RPQ=0.00;SB=0.90909094;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:60.50:0:3:248.62:8:188.12:0:0.00:8:0.00:0:0.00:0.00:0.00:232:9:0:0.00:0:0.00:0
5	174805149	gridss105_33b	A	AAAACAAAATAAGACATTTTGTACCAAAGATTAGCCAAAAAAAAAAAAAAAATTAACCAAAA.	412.91	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=186.46;BASRP=0;BASSR=8;BEID=asm105-18;BEIDH=-1;BEIDL=0;BQ=412.91;BSC=9;BSCQ=226.46;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=412.91;EVENT=gridss105_33;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=52;REFPAIR=9;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:186.46:0:8:412.91:9:226.46:0:0.00:9:0.00:0:0.00:0.00:0.00:52:9:0:0.00:0:0.00:0
5	176396045	gridss105_8o	A	A[5:176396140[	62.17	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-29,30;CIRPOS=-55,56;CQ=62.17;EVENT=gridss105_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss105_8h;RAS=0;RASQ=0.00;REF=471;REFPAIR=35;RP=3;RPQ=62.17;SC=98M12D138M1X58N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.17:0.00:471:35:3:62.17:0:0.00:3
5	176396140	gridss105_8h	G	]5:176396045]G	62.17	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=63.74;BSC=3;BSCQ=63.74;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-55,56;CIRPOS=-29,30;CQ=62.17;EVENT=gridss105_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss105_8o;RAS=0;RASQ=0.00;REF=372;REFPAIR=22;RP=3;RPQ=62.17;SB=0.33333334;SC=1X110N1X199M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:63.74:3:63.74:0:0.00:3:0.00:0:0.00:62.17:0.00:372:22:3:62.17:0:0.00:3
5	178363130	gridss106_2o	T	TTCCAGTCTCTCTTGGCTAGGTGACCTTTCAAGG[5:178363164[	876.78	SINGLE_ASSEMBLY	AS=1;ASQ=876.78;ASRP=0;ASSR=22;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm106-1;BEIDH=0;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=876.78;EVENT=gridss106_2;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss106_2h;RAS=0;RASQ=0.00;REF=68;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=58M1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=22	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:876.78:0:22:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:876.78:0.00:68:0:0:0.00:0:0.00:22
5	178363164	gridss106_2h	T	]5:178363130]TCCAGTCTCTCTTGGCTAGGTGACCTTTCAAGGT	876.78	SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=22;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm106-1;BEIDH=0;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=876.78;EVENT=gridss106_2;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss106_2o;RAS=1;RASQ=876.78;REF=156;REFPAIR=2;RP=0;RPQ=0.00;SB=1.0;SC=1X94M;SR=0;SRQ=0.00;SVTYPE=BND;VF=22	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:22:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:876.78:876.78:156:2:0:0.00:0:0.00:22
6	35434187	gridss109_5o	T	T[6:35434367[	126.20	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.10;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm109-38;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-17,17;CQ=126.20;EVENT=gridss109_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss109_5h;RAS=0;RASQ=0.00;REF=329;REFPAIR=20;RP=3;RPQ=63.10;SC=273M1X33N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.10:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.20:0.00:329:20:3:63.10:0:0.00:3
6	35434367	gridss109_5h	G	]6:35434187]G	126.20	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm109-38;BEIDH=0;BEIDL=2;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-17,17;CQ=126.20;EVENT=gridss109_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss109_5o;RAS=1;RASQ=63.10;REF=191;REFPAIR=11;RP=3;RPQ=63.10;SB=1.0;SC=1X33N1X123M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:126.20:63.10:191:11:3:63.10:0:0.00:3
6	44615915	gridss110_31b	T	TCCTGCCTG.	662.14	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=286.90;BASRP=0;BASSR=15;BEID=asm110-19;BEIDH=-1;BEIDL=0;BQ=662.14;BSC=19;BSCQ=375.23;BUM=0;BUMQ=0.00;BVF=17;CAS=0;CASQ=0.00;CQ=592.97;EVENT=gridss110_31;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=194;REFPAIR=17;RP=0;RPQ=0.00;SB=0.23529412;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:286.90:0:15:662.14:19:375.23:0:0.00:17:0.00:0:0.00:0.00:0.00:194:17:0:0.00:0:0.00:0
6	44615919	gridss110_52b	C	.TCCTCCTGC	136.35	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.48;BASRP=0;BASSR=3;BEID=asm110-43;BEIDH=-1;BEIDL=8;BQ=136.35;BSC=4;BSCQ=78.87;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=136.35;EVENT=gridss110_52;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=183;REFPAIR=17;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.48:0:3:136.35:4:78.87:0:0.00:4:0.00:0:0.00:0.00:0.00:183:17:0:0.00:0:0.00:0
6	107141225	gridss117_4b	A	AAATGTGTCCAAA.	136.10	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=58.27;BASRP=0;BASSR=3;BEID=asm117-1;BEIDH=-1;BEIDL=0;BQ=136.10;BSC=4;BSCQ=77.83;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=116.53;EVENT=gridss117_4;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=85;REFPAIR=8;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:58.27:0:3:136.10:4:77.83:0:0.00:4:0.00:0:0.00:0.00:0.00:85:8:0:0.00:0:0.00:0
6	142691947	gridss120_78b	T	.AAGTGGGGGGGGTTTTTTGGTGTT	522.27	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=22.26;BASRP=0;BASSR=1;BEID=asm120-69;BEIDH=-1;BEIDL=23;BQ=522.27;BSC=19;BSCQ=500.01;BUM=0;BUMQ=0.00;BVF=19;CAS=0;CASQ=0.00;CQ=93.59;EVENT=gridss120_78;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=105;REFPAIR=14;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:22.26:0:1:522.27:19:500.01:0:0.00:19:0.00:0:0.00:0.00:0.00:105:14:0:0.00:0:0.00:0
6	145422101	gridss120_41b	T	TGATACTGTGAGCCCAGCAAATGCGTTACACC.	339.91	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=169.95;BASRP=0;BASSR=8;BEID=asm120-33;BEIDH=-1;BEIDL=0;BQ=339.91;BSC=8;BSCQ=169.95;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=339.91;EVENT=gridss120_41;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=2;REFPAIR=3;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:169.95:0:8:339.91:8:169.95:0:0.00:8:0.00:0:0.00:0.00:0.00:2:3:0:0.00:0:0.00:0
6	170877555	gridss123_15b	T	TTTTGAGA.	226.07	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=113.04;BASRP=0;BASSR=6;BEID=asm123-12;BEIDH=-1;BEIDL=0;BQ=226.07;BSC=6;BSCQ=113.04;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=226.07;EVENT=gridss123_15;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=116;REFPAIR=12;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:113.04:0:6:226.07:6:113.04:0:0.00:6:0.00:0:0.00:0.00:0.00:116:12:0:0.00:0:0.00:0
7	6037073	gridss124_80b	A	ATTCACAAATACTTACCAATAAA.	143.32	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=59.97;BASRP=0;BASSR=3;BEID=asm124-56;BEIDH=-1;BEIDL=0;BQ=143.32;BSC=4;BSCQ=83.35;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=101.26;EVENT=gridss124_80;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=79;REFPAIR=6;RP=0;RPQ=0.00;SB=0.71428573;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:59.97:0:3:143.32:4:83.35:0:0.00:4:0.00:0:0.00:0.00:0.00:79:6:0:0.00:0:0.00:0
7	6047489	gridss124_228b	T	.AAACCAAATAAAGGCAACAGGAACAATTTTGAT	799.02	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=69.67;BASRP=0;BASSR=3;BEID=asm124-210;BEIDH=-1;BEIDL=32;BQ=799.02;BSC=26;BSCQ=729.35;BUM=0;BUMQ=0.00;BVF=26;CAS=0;CASQ=0.00;CQ=197.22;EVENT=gridss124_228;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=96;REFPAIR=13;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:69.67:0:3:799.02:26:729.35:0:0.00:26:0.00:0:0.00:0.00:0.00:96:13:0:0.00:0:0.00:0
7	105173431	gridss134_7o	C	C[7:105173511[	190.53	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.81;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-41;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-46,46;CIRPOS=-5,6;CQ=190.53;EVENT=gridss134_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_7h;RAS=0;RASQ=0.00;REF=363;REFPAIR=19;RP=5;RPQ=105.73;SC=215M1X91N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.81:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:190.53:0.00:363:19:5:105.73:0:0.00:5
7	105173511	gridss134_7h	G	]7:105173431]G	190.53	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=3;BANRPQ=63.74;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-41;BEIDH=0;BEIDL=2;BQ=38.64;BSC=2;BSCQ=38.64;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-46,46;CQ=190.53;EVENT=gridss134_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_7o;RAS=1;RASQ=84.81;REF=426;REFPAIR=34;RP=5;RPQ=105.73;SB=0.5;SC=1X10N1X263M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:3:63.74:0:0.00:0.00:0:0:38.64:2:38.64:0:0.00:2:0.00:0:0.00:190.53:84.81:426:34:5:105.73:0:0.00:5
7	105177573	gridss134_354b	T	.TAAAACCAAATAATTTCATGGCATTAAAAAATTTTAACCATGTGGAAAACACAATAATTTAATT	344.04	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=88.00;BASRP=0;BASSR=4;BEID=asm134-270;BEIDH=-1;BEIDL=63;BQ=344.04;BSC=10;BSCQ=256.04;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=212.83;EVENT=gridss134_354;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=34;REFPAIR=7;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:88.00:0:4:344.04:10:256.04:0:0.00:10:0.00:0:0.00:0.00:0.00:34:7:0:0.00:0:0.00:0
7	105179000	gridss134_15o	G	G[7:105179177[	125.63	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.82;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-82;BEIDH=6;BEIDL=0;BQ=79.61;BSC=3;BSCQ=79.61;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-2,2;CQ=125.63;EVENT=gridss134_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_15h;RAS=0;RASQ=0.00;REF=645;REFPAIR=51;RP=3;RPQ=62.82;SB=0.33333334;SC=101M28D174M1X3N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.82:3:0:0:0.00:0:0.00:0.00:0:0:79.61:3:79.61:0:0.00:3:0.00:0:0.00:125.63:0.00:645:51:3:62.82:0:0.00:3
7	105179177	gridss134_15h	A	]7:105179000]A	125.63	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-82;BEIDH=0;BEIDL=6;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-2,2;CQ=125.63;EVENT=gridss134_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_15o;RAS=1;RASQ=62.82;REF=495;REFPAIR=37;RP=3;RPQ=62.82;SC=1X3N1X139M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.63:62.82:495:37:3:62.82:0:0.00:3
7	105187631	gridss134_28o	T	T[7:105187739[	210.20	LOW_QUAL	AS=1;ASQ=105.10;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-106,asm134-401;BEIDH=2,253;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-27,28;CIRPOS=-27,28;CQ=189.87;EVENT=gridss134_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_28h;RAS=1;RASQ=0.00;REF=628;REFPAIR=31;RP=5;RPQ=105.10;SC=252M1X54N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.10:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:210.20:0.00:628:31:5:105.10:0:0.00:5
7	105187739	gridss134_28h	C	]7:105187631]C	210.20	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-106,asm134-401;BEIDH=0,0;BEIDL=2,253;BQ=42.17;BSC=2;BSCQ=42.17;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-27,28;CIRPOS=-27,28;CQ=189.87;EVENT=gridss134_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_28o;RAS=1;RASQ=105.10;REF=444;REFPAIR=27;RP=5;RPQ=105.10;SB=0.5;SC=1X54N1X218M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:42.17:2:42.17:0:0.00:2:0.00:0:0.00:210.20:105.10:444:27:5:105.10:0:0.00:5
7	105190474	gridss134_32o	A	A[7:105190537[	210.13	LOW_QUAL	AS=1;ASQ=83.83;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-137,asm134-396;BEIDH=2,246;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-24,25;CIRPOS=-21,21;CQ=210.13;EVENT=gridss134_32;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_32h;RAS=1;RASQ=0.00;REF=304;REFPAIR=25;RP=6;RPQ=126.30;SC=258M1X48N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.83:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:210.13:0.00:304:25:6:126.30:0:0.00:6
7	105190537	gridss134_32h	T	]7:105190474]T	210.13	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-137,asm134-396;BEIDH=0,0;BEIDL=2,246;BQ=51.74;BSC=2;BSCQ=51.74;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-24,25;CQ=210.13;EVENT=gridss134_32;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_32o;RAS=1;RASQ=83.83;REF=508;REFPAIR=32;RP=6;RPQ=126.30;SB=0.5;SC=1X41N1X265M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:51.74:2:51.74:0:0.00:2:0.00:0:0.00:210.13:83.83:508:32:6:126.30:0:0.00:6
7	105190689	gridss134_36o	T	T[7:105190769[	187.65	LOW_QUAL	AS=1;ASQ=83.18;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-136,asm134-397;BEIDH=2,241;BEIDL=0,0;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-33,34;CIRPOS=-33,34;CQ=187.65;EVENT=gridss134_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_36h;RAS=1;RASQ=0.00;REF=636;REFPAIR=60;RP=5;RPQ=104.47;SB=0.0;SC=240M1X66N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.18:4:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:187.65:0.00:636:60:5:104.47:0:0.00:5
7	105190769	gridss134_36h	G	]7:105190689]G	187.65	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-136,asm134-397;BEIDH=0,0;BEIDL=2,241;BQ=79.68;BSC=3;BSCQ=79.68;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-33,34;CIRPOS=-33,34;CQ=187.65;EVENT=gridss134_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_36o;RAS=1;RASQ=83.18;REF=749;REFPAIR=57;RP=5;RPQ=104.47;SB=0.33333334;SC=1X66N1X186M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:79.68:3:79.68:0:0.00:3:0.00:0:0.00:187.65:83.18:749:57:5:104.47:0:0.00:5
7	105198756	gridss134_216b	A	AAAAAAAGTCCACCAATTTGGATAATTTCATTTTTTTTTAAAGTTTTATTTTTTTTTTTATAATTTAAAAAATAATTA.	495.23	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=104.90;BASRP=0;BASSR=4;BEID=asm134-156;BEIDH=-1;BEIDL=0;BQ=495.23;BSC=15;BSCQ=390.33;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=430.02;EVENT=gridss134_216;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=85;REFPAIR=12;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:104.90:0:4:495.23:15:390.33:0:0.00:15:0.00:0:0.00:0.00:0.00:85:12:0:0.00:0:0.00:0
7	105205612	gridss134_52o	T	T[7:105205839[	105.87	LOW_QUAL	AS=1;ASQ=63.05;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-226,asm134-454;BEIDH=2,127;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-90,91;CIRPOS=-90,91;CQ=105.87;EVENT=gridss134_52;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_52h;RAS=1;RASQ=0.00;REF=70;REFPAIR=5;RP=2;RPQ=42.82;SC=126M1X180N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.05:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:105.87:0.00:70:5:2:42.82:0:0.00:3
7	105205839	gridss134_52h	T	]7:105205612]T	105.87	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-226,asm134-454;BEIDH=0,0;BEIDL=2,127;BQ=76.03;BSC=3;BSCQ=76.03;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-90,91;CIRPOS=-90,91;CQ=105.87;EVENT=gridss134_52;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_52o;RAS=1;RASQ=63.05;REF=321;REFPAIR=17;RP=2;RPQ=42.82;SB=1.0;SC=1X180N1X169M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:76.03:3:76.03:0:0.00:3:0.00:0:0.00:105.87:63.05:321:17:2:42.82:0:0.00:3
7	120083748	gridss135_30b	T	TTTTCATTGCTTTTTAAGTCCAAT.	132.55	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=66.27;BASRP=0;BASSR=3;BEID=asm135-26;BEIDH=-1;BEIDL=0;BQ=132.55;BSC=3;BSCQ=66.27;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=132.55;EVENT=gridss135_30;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=239;REFPAIR=9;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:66.27:0:3:132.55:3:66.27:0:0.00:3:0.00:0:0.00:0.00:0.00:239:9:0:0.00:0:0.00:0
7	152346271	gridss138_20o	A	A[7:152346334[	168.45	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.23;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-98;BEIDH=2;BEIDL=0;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-25,25;CIRPOS=-25,25;CQ=168.45;EVENT=gridss138_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_20h;RAS=0;RASQ=0.00;REF=303;REFPAIR=18;RP=4;RPQ=84.23;SB=1.0;SC=122M35D100M1X49N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.23:4:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:0:0.00:0:0.00:168.45:0.00:303:18:4:84.23:0:0.00:4
7	152346334	gridss138_20h	A	]7:152346271]A	168.45	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-98;BEIDH=0;BEIDL=2;BQ=78.85;BSC=3;BSCQ=78.85;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-25,25;CIRPOS=-25,25;CQ=168.45;EVENT=gridss138_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_20o;RAS=1;RASQ=84.23;REF=445;REFPAIR=23;RP=4;RPQ=84.23;SB=0.6666667;SC=1X49N1X264M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:78.85:3:78.85:0:0.00:2:0.00:0:0.00:168.45:84.23:445:23:4:84.23:0:0.00:4
7	152349640	gridss138_26o	C	C[7:152349726[	168.74	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.37;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-125;BEIDH=2;BEIDL=0;BQ=28.05;BSC=1;BSCQ=28.05;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-33,33;CIRPOS=-33,33;CQ=168.74;EVENT=gridss138_26;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_26h;RAS=0;RASQ=0.00;REF=444;REFPAIR=32;RP=4;RPQ=84.37;SB=0.0;SC=241M1X65N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.37:4:0:0:0.00:0:0.00:0.00:0:0:28.05:1:28.05:0:0.00:1:0.00:0:0.00:168.74:0.00:444:32:4:84.37:0:0.00:4
7	152349726	gridss138_26h	C	]7:152349640]C	168.74	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-125;BEIDH=0;BEIDL=2;BQ=34.72;BSC=1;BSCQ=34.72;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-33,33;CIRPOS=-33,33;CQ=168.74;EVENT=gridss138_26;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_26o;RAS=1;RASQ=84.37;REF=430;REFPAIR=30;RP=4;RPQ=84.37;SB=0.0;SC=1X65N1X177M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:34.72:1:34.72:0:0.00:1:0.00:0:0.00:168.74:84.37:430:30:4:84.37:0:0.00:4
7	152351611	gridss138_28o	T	T[7:152351661[	166.04	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.44;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=41.16;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-132;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-7,8;CQ=145.89;EVENT=gridss138_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_28h;RAS=0;RASQ=0.00;REF=191;REFPAIR=11;RP=5;RPQ=103.60;SC=301M1X5N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.44:3:0:2:41.16:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:166.04:0.00:191:11:5:103.60:0:0.00:5
7	152351661	gridss138_28h	G	]7:152351611]G	166.04	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=41.16;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-132;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-3,3;CQ=145.89;EVENT=gridss138_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_28o;RAS=1;RASQ=62.44;REF=243;REFPAIR=12;RP=5;RPQ=103.60;SC=1X14N1X292M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:41.16:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:166.04:62.44:243:12:5:103.60:0:0.00:5
7	152358541	gridss138_37o	G	G[7:152358585[	146.97	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.30;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-147;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-33,33;CQ=146.97;EVENT=gridss138_37;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_37h;RAS=0;RASQ=0.00;REF=424;REFPAIR=22;RP=4;RPQ=83.67;SC=241M1X65N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.30:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.97:0.00:424:22:4:83.67:0:0.00:4
7	152358585	gridss138_37h	C	]7:152358541]C	146.97	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-147;BEIDH=0;BEIDL=2;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIRPOS=-33,33;CQ=146.97;EVENT=gridss138_37;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_37o;RAS=1;RASQ=63.30;REF=414;REFPAIR=38;RP=4;RPQ=83.67;SB=1.0;SC=1X100M37D170M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:146.97:63.30:414:38:4:83.67:0:0.00:4
7	154756183	gridss138_55o	G	G[7:154756269[	104.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-3,3;CQ=104.32;EVENT=gridss138_55;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_55h;RAS=0;RASQ=0.00;REF=309;REFPAIR=22;RP=5;RPQ=104.32;SC=249M1X57N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:104.32:0.00:309:22:5:104.32:0:0.00:5
7	154756269	gridss138_55h	T	]7:154756183]T	104.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=5;BANRPQ=104.32;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=21.52;BSC=1;BSCQ=21.52;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-29,29;CQ=104.32;EVENT=gridss138_55;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_55o;RAS=0;RASQ=0.00;REF=654;REFPAIR=33;RP=5;RPQ=104.32;SB=0.0;SC=1X5N1X199M1D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:5:104.32:0:0.00:0.00:0:0:21.52:1:21.52:0:0.00:1:0.00:0:0.00:104.32:0.00:654:33:5:104.32:0:0.00:5
7	154756922	gridss138_86o	G	]7:154756987]G	246.94	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=8;ASSR=0;BA=0;BANRP=4;BANRPQ=82.15;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-260;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-22,22;CQ=164.78;EVENT=gridss138_86;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_86h;RAS=1;RASQ=164.78;REF=300;REFPAIR=20;RP=4;RPQ=82.15;SC=1X43N1X400M;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:8:0:4:82.15:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:246.94:164.78:300:20:4:82.15:0:0.00:8
7	154756987	gridss138_86h	G	G[7:154756922[	246.94	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=164.78;ASRP=8;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-260;BEIDH=2;BEIDL=0;BQ=22.69;BSC=1;BSCQ=22.69;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-22,22;CQ=164.78;EVENT=gridss138_86;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_86o;RAS=0;RASQ=0.00;REF=300;REFPAIR=25;RP=4;RPQ=82.15;SB=0.0;SC=251M12D1X43N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:164.78:8:0:0:0.00:0:0.00:0.00:0:0:22.69:1:22.69:0:0.00:1:0.00:0:0.00:246.94:0.00:300:25:4:82.15:0:0.00:8
7	154760417	gridss138_67o	C	C[7:154760562[	169.51	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.75;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-286;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-18,18;CQ=169.51;EVENT=gridss138_67;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_67h;RAS=0;RASQ=0.00;REF=281;REFPAIR=31;RP=4;RPQ=84.75;SC=170M1D100M1X35N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.75:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:169.51:0.00:281:31:4:84.75:0:0.00:4
7	154760562	gridss138_67h	T	]7:154760417]T	169.51	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=3;BANRPQ=64.22;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-286;BEIDH=0;BEIDL=2;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-18,18;CQ=169.51;EVENT=gridss138_67;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_67o;RAS=1;RASQ=84.75;REF=356;REFPAIR=17;RP=4;RPQ=84.75;SB=0.0;SC=1X35N1X144M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:3:64.22:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:169.51:84.75:356:17:4:84.75:0:0.00:4
7	154767717	gridss138_72o	A	A[7:154767794[	83.78	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-8,9;CQ=63.43;EVENT=gridss138_72;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_72h;RAS=0;RASQ=0.00;REF=301;REFPAIR=20;RP=4;RPQ=83.78;SB=0.0;SC=132M19D120M1X35N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:83.78:0.00:301:20:4:83.78:0:0.00:4
7	154767794	gridss138_72h	G	]7:154767717]G	83.78	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-18,18;CQ=63.43;EVENT=gridss138_72;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_72o;RAS=0;RASQ=0.00;REF=436;REFPAIR=23;RP=4;RPQ=83.78;SC=1X16N1X100M32D158M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:83.78:0.00:436:23:4:83.78:0:0.00:4
7	154792046	gridss138_78o	C	C[7:154792175[	167.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.95;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-343;BEIDH=2;BEIDL=0;BQ=25.44;BSC=1;BSCQ=25.44;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-24,24;CQ=147.20;EVENT=gridss138_78;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_78h;RAS=0;RASQ=0.00;REF=495;REFPAIR=30;RP=4;RPQ=83.95;SB=0.0;SC=259M1X47N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.95:4:0:0:0.00:0:0.00:0.00:0:0:25.44:1:25.44:0:0.00:1:0.00:0:0.00:167.91:0.00:495:30:4:83.95:0:0.00:4
7	154792175	gridss138_78h	A	]7:154792046]A	167.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm138-343;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-24,24;CQ=147.20;EVENT=gridss138_78;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_78o;RAS=1;RASQ=83.95;REF=640;REFPAIR=24;RP=4;RPQ=83.95;SC=1X47N1X209M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:2:42.82:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.91:83.95:640:24:4:83.95:0:0.00:4
8	1130623	gridss139_16b	C	CTTACCATCGAGTGTGTCGGT.	328.35	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=164.18;BASRP=0;BASSR=8;BEID=asm139-12;BEIDH=-1;BEIDL=0;BQ=328.35;BSC=8;BSCQ=164.18;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=307.61;EVENT=gridss139_16;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=60;REFPAIR=7;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:164.18:0:8:328.35:8:164.18:0:0.00:8:0.00:0:0.00:0.00:0.00:60:7:0:0.00:0:0.00:0
8	6765906	gridss140_2b	T	TCGTGGACTTACGAAC.	275.25	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=137.62;BASRP=0;BASSR=7;BEID=asm140-2;BEIDH=-1;BEIDL=0;BQ=275.25;BSC=7;BSCQ=137.62;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=275.25;EVENT=gridss140_2;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=93;REFPAIR=9;RP=0;RPQ=0.00;SB=0.71428573;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:137.62:0:7:275.25:7:137.62:0:0.00:7:0.00:0:0.00:0.00:0.00:93:9:0:0.00:0:0.00:0
8	6765911	gridss140_13b	G	.AGGTCGTGG	114.59	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.30;BASRP=0;BASSR=3;BEID=asm140-10;BEIDH=-1;BEIDL=8;BQ=114.59;BSC=3;BSCQ=57.30;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=114.59;EVENT=gridss140_13;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=92;REFPAIR=9;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.30:0:3:114.59:3:57.30:0:0.00:3:0.00:0:0.00:0.00:0.00:92:9:0:0.00:0:0.00:0
8	25272426	gridss141_25b	T	.AAAAGAAACAAACACCTAAAAATATTTAAAAAAAAAATTTTTAGTCAATTCCGGGGCCTTTTTTTTTTTTTTTTTT	1452.45	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=714.23;BASRP=0;BASSR=28;BEID=asm141-17;BEIDH=-1;BEIDL=75;BQ=1452.45;BSC=29;BSCQ=738.23;BUM=0;BUMQ=0.00;BVF=29;CAS=0;CASQ=0.00;CQ=1428.45;EVENT=gridss141_25;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=49;REFPAIR=21;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:714.23:0:28:1452.45:29:738.23:0:0.00:29:0.00:0:0.00:0.00:0.00:49:21:0:0.00:0:0.00:0
8	25272438	gridss141_12b	T	TTTTTTTTTTTTTTTTTTTGAAGCTCCCTGGGTTTTAAT.	577.28	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=266.56;BASRP=0;BASSR=12;BEID=asm141-8;BEIDH=-1;BEIDL=0;BQ=577.28;BSC=14;BSCQ=310.72;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=577.28;EVENT=gridss141_12;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=35;REFPAIR=4;RP=0;RPQ=0.00;SB=0.88461536;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:266.56:0:12:577.28:14:310.72:0:0.00:14:0.00:0:0.00:0.00:0.00:35:4:0:0.00:0:0.00:0
8	30938649	gridss142_3o	G	G[8:30938755[	167.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.95;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm142-27;BEIDH=2;BEIDL=0;BQ=44.59;BSC=2;BSCQ=44.59;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-18,18;CQ=167.91;EVENT=gridss142_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss142_3h;RAS=0;RASQ=0.00;REF=308;REFPAIR=17;RP=4;RPQ=83.95;SB=1.0;SC=271M1X35N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.95:4:0:0:0.00:0:0.00:0.00:0:0:44.59:2:44.59:0:0.00:2:0.00:0:0.00:167.91:0.00:308:17:4:83.95:0:0.00:4
8	30938755	gridss142_3h	T	]8:30938649]T	167.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=4;BANRPQ=83.95;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm142-27;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-18,18;CQ=167.91;EVENT=gridss142_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss142_3o;RAS=1;RASQ=83.95;REF=341;REFPAIR=24;RP=4;RPQ=83.95;SC=1X35N1X186M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:4:83.95:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.91:83.95:341:24:4:83.95:0:0.00:4
8	30954245	gridss142_174b	T	.TTCCCTTTCTTTT	138.83	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=59.37;BASRP=0;BASSR=3;BEID=asm142-153;BEIDH=-1;BEIDL=12;BQ=138.83;BSC=4;BSCQ=79.47;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=118.73;EVENT=gridss142_174;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=98;REFPAIR=6;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:59.37:0:3:138.83:4:79.47:0:0.00:4:0.00:0:0.00:0.00:0.00:98:6:0:0.00:0:0.00:0
8	30954264	gridss142_66b	T	TTTTTTTTTTTTTTTTTACACAGGAAAATACGGGTTTTT.	215.04	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=93.50;BASRP=0;BASSR=4;BEID=asm142-46;BEIDH=-1;BEIDL=0;BQ=215.04;BSC=5;BSCQ=121.55;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=186.99;EVENT=gridss142_66;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=145;REFPAIR=16;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:93.50:0:4:215.04:5:121.55:0:0.00:5:0.00:0:0.00:0.00:0.00:145:16:0:0.00:0:0.00:0
8	90946685	gridss148_2o	G	G[8:90946842[	63.29	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-28,29;CIRPOS=-35,36;CQ=63.29;EVENT=gridss148_2;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_2h;RAS=0;RASQ=0.00;REF=0;REFPAIR=0;RP=3;RPQ=63.29;SC=101M48D101M1X56N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.29:0.00:0:0:3:63.29:0:0.00:3
8	90946842	gridss148_2h	G	]8:90946685]G	63.29	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=46.04;BSC=2;BSCQ=46.04;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-28,29;CQ=63.29;EVENT=gridss148_2;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_2o;RAS=0;RASQ=0.00;REF=160;REFPAIR=0;RP=3;RPQ=63.29;SB=1.0;SC=1X70N1X112M23D65M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:46.04:2:46.04:0:0.00:2:0.00:0:0.00:63.29:0.00:160:0:3:63.29:0:0.00:3
8	90948758	gridss148_146b	T	TAGGCCTGC.	115.29	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.64;BASRP=0;BASSR=3;BEID=asm148-6;BEIDH=-1;BEIDL=0;BQ=115.29;BSC=3;BSCQ=57.64;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=115.29;EVENT=gridss148_146;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=84;REFPAIR=12;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.64:0:3:115.29:3:57.64:0:0.00:3:0.00:0:0.00:0.00:0.00:84:12:0:0.00:0:0.00:0
8	90948760	gridss148_495b	G	.ATAATAGG	115	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.50;BASRP=0;BASSR=3;BEID=asm148-424;BEIDH=-1;BEIDL=7;BQ=115.00;BSC=3;BSCQ=57.50;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=95.84;EVENT=gridss148_495;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=86;REFPAIR=13;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.50:0:3:115.00:3:57.50:0:0.00:3:0.00:0:0.00:0.00:0.00:86:13:0:0.00:0:0.00:0
8	90949373	gridss148_12o	A	A[8:90949475[	147.98	LOW_QUAL	AS=1;ASQ=63.29;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-446,asm148-47;BEIDH=168,2;BEIDL=0,0;BQ=25.95;BSC=1;BSCQ=25.95;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-70,70;CIRPOS=-28,28;CQ=147.98;EVENT=gridss148_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_12h;RAS=1;RASQ=0.00;REF=306;REFPAIR=22;RP=4;RPQ=84.70;SB=0.0;SC=167M1X139N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.29:3:0:0:0.00:0:0.00:0.00:0:0:25.95:1:25.95:0:0.00:1:0.00:0:0.00:147.98:0.00:306:22:4:84.70:0:0.00:4
8	90949475	gridss148_12h	C	]8:90949373]C	147.98	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-446,asm148-47;BEIDH=0,0;BEIDL=168,2;BQ=28.37;BSC=1;BSCQ=28.37;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-70,70;CQ=147.98;EVENT=gridss148_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_12o;RAS=1;RASQ=63.29;REF=611;REFPAIR=41;RP=4;RPQ=84.70;SB=0.0;SC=1X55N1X147M3D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:28.37:1:28.37:0:0.00:1:0.00:0:0.00:147.98:63.29:611:41:4:84.70:0:0.00:4
8	90951488	gridss148_510b	G	.GCAAACG	114	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.00;BASRP=0;BASSR=3;BEID=asm148-465;BEIDH=-1;BEIDL=6;BQ=114.00;BSC=3;BSCQ=57.00;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=114.00;EVENT=gridss148_510;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=100;REFPAIR=13;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.00:0:3:114.00:3:57.00:0:0.00:3:0.00:0:0.00:0.00:0.00:100:13:0:0.00:0:0.00:0
8	90957392	gridss148_19o	T	T[8:90957598[	128.30	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=64.15;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-96;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-52,53;CIRPOS=-52,53;CQ=106.97;EVENT=gridss148_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_19h;RAS=0;RASQ=0.00;REF=187;REFPAIR=11;RP=3;RPQ=64.15;SC=101M1D100M1X104N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.15:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:128.30:0.00:187:11:3:64.15:0:0.00:3
8	90957598	gridss148_19h	G	]8:90957392]G	128.30	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-96;BEIDH=0;BEIDL=2;BQ=19.31;BSC=1;BSCQ=19.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-52,53;CIRPOS=-52,53;CQ=106.97;EVENT=gridss148_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_19o;RAS=1;RASQ=64.15;REF=247;REFPAIR=15;RP=3;RPQ=64.15;SB=0.0;SC=1X104N1X187M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:19.31:1:19.31:0:0.00:1:0.00:0:0.00:128.30:64.15:247:15:3:64.15:0:0.00:3
8	90958319	gridss148_25o	T	T[8:90958355[	185.06	LOW_QUAL	AS=1;ASQ=82.23;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-494,asm148-94;BEIDH=212,2;BEIDL=0,0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-19,20;CQ=185.06;EVENT=gridss148_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_25h;RAS=1;RASQ=0.00;REF=328;REFPAIR=24;RP=5;RPQ=102.83;SB=0.0;SC=299M1X7N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:82.23:4:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:185.06:0.00:328:24:5:102.83:0:0.00:5
8	90958355	gridss148_25h	T	]8:90958319]T	185.06	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=1;BANRPQ=20.60;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-494,asm148-94;BEIDH=0,0;BEIDL=212,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-4,4;CQ=185.06;EVENT=gridss148_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_25o;RAS=1;RASQ=82.23;REF=321;REFPAIR=26;RP=5;RPQ=102.83;SC=1X38N1X168M4D24M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:1:20.60:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:185.06:82.23:321:26:5:102.83:0:0.00:5
8	90958540	gridss148_28o	A	A[8:90958581[	63.68	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-20,20;CIRPOS=-6,6;CQ=84.39;EVENT=gridss148_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_28h;RAS=0;RASQ=0.00;REF=120;REFPAIR=12;RP=3;RPQ=63.68;SC=238M1X39N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.68:0.00:120:12:3:63.68:0:0.00:3
8	90958581	gridss148_28h	C	]8:90958540]C	63.68	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=2;BANRPQ=42.81;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-20,20;CQ=84.39;EVENT=gridss148_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_28o;RAS=0;RASQ=0.00;REF=94;REFPAIR=5;RP=3;RPQ=63.68;SC=1X11N1X88D207M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:2:42.81:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.68:0.00:94:5:3:63.68:0:0.00:3
8	90960749	gridss148_35o	A	A[8:90960826[	187.38	LOW_QUAL	AS=1;ASQ=83.06;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-137,asm148-537;BEIDH=2,266;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-30,30;CQ=187.38;EVENT=gridss148_35;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_35h;RAS=1;RASQ=0.00;REF=327;REFPAIR=27;RP=5;RPQ=104.32;SC=265M1X41N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.06:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:187.38:0.00:327:27:5:104.32:0:0.00:5
8	90960826	gridss148_35h	G	]8:90960749]G	187.38	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-137,asm148-537;BEIDH=0,0;BEIDL=2,266;BQ=19.97;BSC=1;BSCQ=19.97;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-30,30;CIRPOS=-21,21;CQ=187.38;EVENT=gridss148_35;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_35o;RAS=1;RASQ=83.06;REF=347;REFPAIR=29;RP=5;RPQ=104.32;SB=0.0;SC=1X59N1X210M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:19.97:1:19.97:0:0.00:1:0.00:0:0.00:187.38:83.06:347:29:5:104.32:0:0.00:5
8	90962981	gridss148_566b	T	.AATGAAAGT	646.83	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=323.41;BASRP=0;BASSR=17;BEID=asm148-516;BEIDH=-1;BEIDL=8;BQ=646.83;BSC=17;BSCQ=323.41;BUM=0;BUMQ=0.00;BVF=17;CAS=0;CASQ=0.00;CQ=646.83;EVENT=gridss148_566;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=280;REFPAIR=30;RP=0;RPQ=0.00;SB=0.7647059;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:323.41:0:17:646.83:17:323.41:0:0.00:17:0.00:0:0.00:0.00:0.00:280:30:0:0.00:0:0.00:0
8	90966006	gridss148_53o	T	T[8:90966087[	169.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.53;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-201;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=169.06;EVENT=gridss148_53;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_53h;RAS=0;RASQ=0.00;REF=336;REFPAIR=18;RP=4;RPQ=84.53;SC=163M35D100M1X8N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.53:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:169.06:0.00:336:18:4:84.53:0:0.00:4
8	90966087	gridss148_53h	A	]8:90966006]A	169.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=3;BANRPQ=63.71;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-201;BEIDH=0;BEIDL=2;BQ=42.86;BSC=2;BSCQ=42.86;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=169.06;EVENT=gridss148_53;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_53o;RAS=1;RASQ=84.53;REF=344;REFPAIR=39;RP=4;RPQ=84.53;SB=0.5;SC=1X8N1X250M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:3:63.71:0:0.00:0.00:0:0:42.86:2:42.86:0:0.00:2:0.00:0:0.00:169.06:84.53:344:39:4:84.53:0:0.00:4
8	90968443	gridss148_291b	A	AACAAGAAGGCAGGGAAAC.	206.90	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=83.35;BASRP=0;BASSR=4;BEID=asm148-170;BEIDH=-1;BEIDL=0;BQ=206.90;BSC=6;BSCQ=123.55;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=166.70;EVENT=gridss148_291;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=60;REFPAIR=4;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:83.35:0:4:206.90:6:123.55:0:0.00:6:0.00:0:0.00:0.00:0.00:60:4:0:0.00:0:0.00:0
8	90971028	gridss148_64o	T	T[8:90971124[	64.13	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-23,23;CQ=64.13;EVENT=gridss148_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_64h;RAS=0;RASQ=0.00;REF=439;REFPAIR=29;RP=3;RPQ=64.13;SC=101M72D126M1X7N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.13:0.00:439:29:3:64.13:0:0.00:3
8	90971124	gridss148_64h	G	]8:90971028]G	64.13	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-4,4;CQ=64.13;EVENT=gridss148_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_64o;RAS=0;RASQ=0.00;REF=357;REFPAIR=27;RP=3;RPQ=64.13;SC=1X45N1X100M53D108M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.13:0.00:357:27:3:64.13:0:0.00:3
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8	90974076	gridss148_70h	G	]8:90973972]G	126.46	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-247;BEIDH=0;BEIDL=2;BQ=42.36;BSC=2;BSCQ=42.36;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-45,45;CIRPOS=-45,45;CQ=126.46;EVENT=gridss148_70;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_70o;RAS=1;RASQ=63.23;REF=220;REFPAIR=19;RP=3;RPQ=63.23;SB=1.0;SC=1X89N1X164M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:42.36:2:42.36:0:0.00:2:0.00:0:0.00:126.46:63.23:220:19:3:63.23:0:0.00:3
8	90982887	gridss148_82o	G	G[8:90982997[	84.46	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=64.09;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-43,43;CQ=84.46;EVENT=gridss148_82;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_82h;RAS=0;RASQ=0.00;REF=368;REFPAIR=26;RP=4;RPQ=84.46;SC=105M45D153M1X3N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:64.09:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.46:0.00:368:26:4:84.46:0:0.00:4
8	90982997	gridss148_82h	T	]8:90982887]T	84.46	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=4;BANRPQ=84.46;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-43,43;CIRPOS=-2,2;CQ=84.46;EVENT=gridss148_82;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_82o;RAS=0;RASQ=0.00;REF=442;REFPAIR=22;RP=4;RPQ=84.46;SC=1X85N1X221M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:4:84.46:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.46:0.00:442:22:4:84.46:0:0.00:4
8	90984280	gridss148_86o	A	A[8:90984353[	146.27	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.49;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.29;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-303;BEIDH=2;BEIDL=0;BQ=117.83;BSC=5;BSCQ=117.83;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-33,34;CIRPOS=-34,35;CQ=146.27;EVENT=gridss148_86;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_86h;RAS=0;RASQ=0.00;REF=504;REFPAIR=39;RP=4;RPQ=83.78;SB=0.6;SC=240M1X66N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.49:3:0:1:21.29:0:0.00:0.00:0:0:117.83:5:117.83:0:0.00:5:0.00:0:0.00:146.27:0.00:504:39:4:83.78:0:0.00:4
8	90984353	gridss148_86h	C	]8:90984280]C	146.27	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=4;BANRPQ=83.78;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-303;BEIDH=0;BEIDL=2;BQ=48.06;BSC=2;BSCQ=48.06;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-34,35;CIRPOS=-33,34;CQ=146.27;EVENT=gridss148_86;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_86o;RAS=1;RASQ=62.49;REF=418;REFPAIR=29;RP=4;RPQ=83.78;SB=1.0;SC=1X68N1X238M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:4:83.78:0:0.00:0.00:0:0:48.06:2:48.06:0:0.00:2:0.00:0:0.00:146.27:62.49:418:29:4:83.78:0:0.00:4
8	90984385	gridss148_90o	G	G[8:90984487[	105.15	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.22;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-304;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-39,39;CQ=126.43;EVENT=gridss148_90;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_90h;RAS=0;RASQ=0.00;REF=396;REFPAIR=15;RP=2;RPQ=41.93;SC=101M31D100M1X77N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.22:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:105.15:0.00:396:15:2:41.93:0:0.00:3
8	90984487	gridss148_90h	A	]8:90984385]A	105.15	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-304;BEIDH=0;BEIDL=2;BQ=51.55;BSC=2;BSCQ=51.55;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-39,39;CQ=126.43;EVENT=gridss148_90;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_90o;RAS=1;RASQ=63.22;REF=168;REFPAIR=11;RP=2;RPQ=41.93;SB=0.0;SC=1X77N1X181M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.41:0:0.00:0.00:0:0:51.55:2:51.55:0:0.00:2:0.00:0:0.00:105.15:63.22:168:11:2:41.93:0:0.00:3
8	90987531	gridss148_96o	C	C[8:90987628[	232.08	LOW_QUAL	AS=1;ASQ=105.34;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-334,asm148-706;BEIDH=2,307;BEIDL=0,0;BQ=87.33;BSC=3;BSCQ=87.33;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-8,9;CQ=232.08;EVENT=gridss148_96;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_96h;RAS=1;RASQ=0.00;REF=342;REFPAIR=25;RP=6;RPQ=126.75;SB=0.6666667;SC=306M1X55N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.34:5:0:0:0.00:0:0.00:0.00:0:0:87.33:3:87.33:0:0.00:3:0.00:0:0.00:232.08:0.00:342:25:6:126.75:0:0.00:6
8	90987628	gridss148_96h	T	]8:90987531]T	232.08	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-334,asm148-706;BEIDH=0,0;BEIDL=2,307;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-28,28;CQ=232.08;EVENT=gridss148_96;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_96o;RAS=1;RASQ=105.34;REF=277;REFPAIR=28;RP=6;RPQ=126.75;SC=1X16N1X290M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:232.08:105.34:277:28:6:126.75:0:0.00:6
8	90992938	gridss148_108o	A	A[8:90993033[	233.59	LOW_QUAL	AS=1;ASQ=106.22;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-390,asm148-742;BEIDH=2,273;BEIDL=0,0;BQ=43.64;BSC=2;BSCQ=43.64;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-49,49;CIRPOS=-39,39;CQ=212.44;EVENT=gridss148_108;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_108h;RAS=1;RASQ=0.00;REF=161;REFPAIR=11;RP=6;RPQ=127.37;SB=0.5;SC=267M1X97N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.22:5:0:0:0.00:0:0.00:0.00:0:0:43.64:2:43.64:0:0.00:1:0.00:0:0.00:233.59:0.00:161:11:6:127.37:0:0.00:6
8	90993033	gridss148_108h	C	]8:90992938]C	233.59	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-390,asm148-742;BEIDH=0,0;BEIDL=2,273;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-49,49;CQ=212.44;EVENT=gridss148_108;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_108o;RAS=1;RASQ=106.22;REF=345;REFPAIR=21;RP=6;RPQ=127.37;SC=1X77N1X229M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:233.59:106.22:345:21:6:127.37:0:0.00:6
8	90993367	gridss148_112o	T	T[8:90993551[	64.23	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-745;BEIDH=165;BEIDL=0;BQ=28.37;BSC=1;BSCQ=28.37;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-71,72;CIRPOS=-48,49;CQ=64.23;EVENT=gridss148_112;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_112h;RAS=1;RASQ=0.00;REF=163;REFPAIR=8;RP=3;RPQ=64.23;SB=0.0;SC=164M1X142N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:28.37:1:28.37:0:0.00:1:0.00:0:0.00:64.23:0.00:163:8:3:64.23:0:0.00:3
8	90993551	gridss148_112h	A	]8:90993367]A	64.23	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-745;BEIDH=0;BEIDL=165;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-48,49;CIRPOS=-71,72;CQ=64.23;EVENT=gridss148_112;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_112o;RAS=0;RASQ=0.00;REF=198;REFPAIR=11;RP=3;RPQ=64.23;SB=1.0;SC=1X96N1X210M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:64.23:0.00:198:11:3:64.23:0:0.00:3
8	90994377	gridss148_117o	T	T[8:90994460[	210.91	LOW_QUAL	AS=1;ASQ=105.46;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-391,asm148-743;BEIDH=2,275;BEIDL=0,0;BQ=23.25;BSC=1;BSCQ=23.25;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-16,17;CIRPOS=-16,17;CQ=210.91;EVENT=gridss148_117;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_117h;RAS=1;RASQ=0.00;REF=289;REFPAIR=24;RP=5;RPQ=105.46;SB=1.0;SC=274M1X32N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.46:5:0:0:0.00:0:0.00:0.00:0:0:23.25:1:23.25:0:0.00:1:0.00:0:0.00:210.91:0.00:289:24:5:105.46:0:0.00:5
8	90994460	gridss148_117h	A	]8:90994377]A	210.91	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-391,asm148-743;BEIDH=0,0;BEIDL=2,275;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-16,17;CIRPOS=-16,17;CQ=210.91;EVENT=gridss148_117;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_117o;RAS=1;RASQ=105.46;REF=227;REFPAIR=18;RP=5;RPQ=105.46;SC=1X32N1X244M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:210.91:105.46:227:18:5:105.46:0:0.00:5
8	136902222	gridss153_5b	T	TCAAAGCAACTTGAATTT.	155.97	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=77.99;BASRP=0;BASSR=4;BEID=asm153-2;BEIDH=-1;BEIDL=0;BQ=155.97;BSC=4;BSCQ=77.99;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=155.97;EVENT=gridss153_5;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=24;REFPAIR=9;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:77.99:0:4:155.97:4:77.99:0:0.00:4:0.00:0:0.00:0.00:0.00:24:9:0:0.00:0:0.00:0
8	143612125	gridss153_38b	G	.GAGAATTG	134.12	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.01;BASRP=0;BASSR=3;BEID=asm153-43;BEIDH=-1;BEIDL=7;BQ=134.12;BSC=4;BSCQ=77.11;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=114.02;EVENT=gridss153_38;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=183;REFPAIR=15;RP=0;RPQ=0.00;SB=0.85714287;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.01:0:3:134.12:4:77.11:0:0.00:4:0.00:0:0.00:0.00:0.00:183:15:0:0.00:0:0.00:0
9	35076543	gridss157_8o	A	A[9:35076623[	84.10	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm157-236;BEIDH=213;BEIDL=0;BQ=65.59;BSC=3;BSCQ=65.59;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-47,48;CIRPOS=-10,10;CQ=84.10;EVENT=gridss157_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss157_8h;RAS=1;RASQ=0.00;REF=198;REFPAIR=4;RP=4;RPQ=84.10;SB=0.33333334;SC=212M1X94N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:65.59:3:65.59:0:0.00:3:0.00:0:0.00:84.10:0.00:198:4:4:84.10:0:0.00:4
9	35076623	gridss157_8h	C	]9:35076543]C	84.10	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm157-236;BEIDH=0;BEIDL=213;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-10,10;CIRPOS=-47,48;CQ=84.10;EVENT=gridss157_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss157_8o;RAS=0;RASQ=0.00;REF=130;REFPAIR=6;RP=4;RPQ=84.10;SC=1X19N1X287M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.10:0.00:130:6:4:84.10:0:0.00:4
9	78108510	gridss161_2o	G	GAACAATGCTGCAGTAACAATCATCTAAATTTAT[9:78108544[	1017.36	SINGLE_ASSEMBLY	AS=1;ASQ=1017.36;ASRP=0;ASSR=22;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm161-4;BEIDH=0;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=1017.36;EVENT=gridss161_2;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss161_2h;RAS=0;RASQ=0.00;REF=188;REFPAIR=15;RP=0;RPQ=0.00;SB=0.45454547;SC=65M1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=21	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:1017.36:0:22:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:1017.36:0.00:188:15:0:0.00:0:0.00:21
9	78108544	gridss161_2h	G	]9:78108510]AACAATGCTGCAGTAACAATCATCTAAATTTATG	1017.36	SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=22;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm161-4;BEIDH=0;BEIDL=0;BQ=20.23;BSC=1;BSCQ=20.23;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CQ=1017.36;EVENT=gridss161_2;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss161_2o;RAS=1;RASQ=1017.36;REF=217;REFPAIR=10;RP=0;RPQ=0.00;SB=0.4347826;SC=1X24M;SR=0;SRQ=0.00;SVTYPE=BND;VF=21	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:22:0:0.00:0:0.00:0.00:0:0:20.23:1:20.23:0:0.00:1:0.00:0:0.00:1017.36:1017.36:217:10:0:0.00:0:0.00:21
9	97862107	gridss163_4o	T	T[9:97862266[	64.21	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-46,46;CQ=64.21;EVENT=gridss163_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss163_4h;RAS=0;RASQ=0.00;REF=253;REFPAIR=18;RP=3;RPQ=64.21;SC=271M1X35N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.21:0.00:253:18:3:64.21:0:0.00:3
9	97862266	gridss163_4h	G	]9:97862107]G	64.21	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=67.74;BSC=3;BSCQ=67.74;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-46,46;CIRPOS=-18,18;CQ=64.21;EVENT=gridss163_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss163_4o;RAS=0;RASQ=0.00;REF=267;REFPAIR=12;RP=3;RPQ=64.21;SB=1.0;SC=1X91N1X215M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:67.74:3:67.74:0:0.00:3:0.00:0:0.00:64.21:0.00:267:12:3:64.21:0:0.00:3
9	97889270	gridss163_25o	C	C[9:97889325[	62.64	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.31;BSC=1;BSCQ=19.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-12,12;CQ=62.64;EVENT=gridss163_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss163_25h;RAS=0;RASQ=0.00;REF=490;REFPAIR=44;RP=3;RPQ=62.64;SB=1.0;SC=280M1X26N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.31:1:19.31:0:0.00:1:0.00:0:0.00:62.64:0.00:490:44:3:62.64:0:0.00:3
9	97889325	gridss163_25h	T	]9:97889270]T	62.64	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,12;CIRPOS=-13,14;CQ=62.64;EVENT=gridss163_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss163_25o;RAS=0;RASQ=0.00;REF=479;REFPAIR=26;RP=3;RPQ=62.64;SC=1X23N1X156M26D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.64:0.00:479:26:3:62.64:0:0.00:3
10	14940202	gridss169_242b	T	.TTTTTTCTTATTTTCTGTTAAGTTTTTTTTTTTTTTT	855.16	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=265.34;BASRP=0;BASSR=11;BEID=asm169-210;BEIDH=-1;BEIDL=36;BQ=855.16;BSC=23;BSCQ=589.82;BUM=0;BUMQ=0.00;BVF=23;CAS=0;CASQ=0.00;CQ=722.86;EVENT=gridss169_242;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=103;REFPAIR=18;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:265.34:0:11:855.16:23:589.82:0:0.00:23:0.00:0:0.00:0.00:0.00:103:18:0:0.00:0:0.00:0
10	14940229	gridss169_65b	T	TTGAAATAGTTTTTTTTTTTTCTTTTTTTTTGAGAAATTGT.	964.48	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=3;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=321.91;BASRP=0;BASSR=13;BEID=asm169-13,asm169-14,asm169-16;BEIDH=-1,-1,-1;BEIDL=0,0,0;BQ=964.48;BSC=26;BSCQ=642.56;BUM=0;BUMQ=0.00;BVF=26;CAS=0;CASQ=0.00;CQ=560.85;EVENT=gridss169_65;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=102;REFPAIR=26;RP=0;RPQ=0.00;SB=0.974359;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:321.91:0:13:964.48:26:642.56:0:0.00:26:0.00:0:0.00:0.00:0.00:102:26:0:0.00:0:0.00:0
10	14946884	gridss169_6o	C	C[10:14946982[	189.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.25;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm169-117;BEIDH=2;BEIDL=0;BQ=102.91;BSC=4;BSCQ=102.91;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-52,53;CIRPOS=-23,23;CQ=189.91;EVENT=gridss169_6;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_6h;RAS=0;RASQ=0.00;REF=353;REFPAIR=31;RP=5;RPQ=105.66;SB=0.25;SC=202M1X104N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.25:4:0:0:0.00:0:0.00:0.00:0:0:102.91:4:102.91:0:0.00:4:0.00:0:0.00:189.91:0.00:353:31:5:105.66:0:0.00:5
10	14946982	gridss169_6h	T	]10:14946884]T	189.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=5;BANRPQ=105.66;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm169-117;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-52,53;CQ=189.91;EVENT=gridss169_6;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_6o;RAS=1;RASQ=84.25;REF=342;REFPAIR=36;RP=5;RPQ=105.66;SC=1X45N1X150M10D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:5:105.66:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:189.91:84.25:342:36:5:105.66:0:0.00:5
10	14949162	gridss169_22o	T	T[10:14949195[	62.80	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=21.30;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=56.39;BSC=2;BSCQ=56.39;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-16,16;CQ=145.80;EVENT=gridss169_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_22h;RAS=0;RASQ=0.00;REF=333;REFPAIR=29;RP=3;RPQ=62.80;SB=0.5;SC=194M99D1X11N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:21.30:0:0.00:0.00:0:0:56.39:2:56.39:0:0.00:2:0.00:0:0.00:62.80:0.00:333:29:3:62.80:0:0.00:3
10	14949195	gridss169_22h	T	]10:14949162]T	62.80	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=21.30;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=89.36;BSC=4;BSCQ=89.36;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-6,6;CQ=145.80;EVENT=gridss169_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_22o;RAS=0;RASQ=0.00;REF=394;REFPAIR=27;RP=3;RPQ=62.80;SB=0.75;SC=1X31N1X225M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:21.30:0:0.00:0.00:0:0:89.36:4:89.36:0:0.00:4:0.00:0:0.00:62.80:0.00:394:27:3:62.80:0:0.00:3
10	14949751	gridss169_31o	G	G[10:14949938[	63.40	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=34.72;BSC=1;BSCQ=34.72;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-29,30;CIRPOS=-6,7;CQ=63.40;EVENT=gridss169_31;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_31h;RAS=0;RASQ=0.00;REF=563;REFPAIR=14;RP=3;RPQ=63.40;SB=0.0;SC=116M32D100M1X58N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:34.72:1:34.72:0:0.00:1:0.00:0:0.00:63.40:0.00:563:14:3:63.40:0:0.00:3
10	14949938	gridss169_31h	G	]10:14949751]G	63.40	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-29,30;CQ=63.40;EVENT=gridss169_31;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_31o;RAS=0;RASQ=0.00;REF=24;REFPAIR=3;RP=3;RPQ=63.40;SC=1X12N1X104M115D75M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.40:0.00:24:3:3:63.40:0:0.00:3
10	14950186	gridss169_141b	T	TTTTTTTTTTTAAAATGAAAAATTTTTTATTTTTTTTGCCAAGGCTGTTGGGATCTCCTCGGACTAACCATTTCGC.	571.45	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=217.06;BASRP=0;BASSR=9;BEID=asm169-48;BEIDH=-1;BEIDL=0;BQ=571.45;BSC=13;BSCQ=354.39;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=456.85;EVENT=gridss169_141;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=41;REFPAIR=14;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:217.06:0:9:571.45:13:354.39:0:0.00:14:0.00:0:0.00:0.00:0.00:41:14:0:0.00:0:0.00:0
10	14950663	gridss169_33o	C	C[10:14950703[	228.86	LOW_QUAL	AS=1;ASQ=83.04;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm169-115,asm169-336,asm169-345;BEIDH=2,199,109;BEIDL=0,0,0;BQ=40.40;BSC=1;BSCQ=40.40;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-6,6;CQ=228.86;EVENT=gridss169_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_33h;RAS=2;RASQ=0.00;REF=681;REFPAIR=41;RP=7;RPQ=145.83;SB=0.0;SC=297M1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.04:4:0:0:0.00:0:0.00:0.00:0:0:40.40:1:40.40:0:0.00:1:0.00:0:0.00:228.86:0.00:681:41:7:145.83:0:0.00:7
10	14950703	gridss169_33h	C	]10:14950663]C	228.86	LOW_QUAL	AS=2;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm169-115,asm169-336,asm169-345;BEIDH=0,0,0;BEIDL=2,199,109;BQ=42.36;BSC=2;BSCQ=42.36;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-5,5;CQ=228.86;EVENT=gridss169_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_33o;RAS=1;RASQ=83.04;REF=708;REFPAIR=47;RP=7;RPQ=145.83;SB=0.5;SC=1X11N1X279M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:42.36:2:42.36:0:0.00:2:0.00:0:0.00:228.86:83.04:708:47:7:145.83:0:0.00:7
10	15149125	gridss169_211b	A	ATTAGGCTTAGTTTCCAAAAAAACCTTTTTTAGGACCCCCGGAATTGAATTTTTTGTTTTTTT.	462.40	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=75.64;BASRP=0;BASSR=3;BEID=asm169-184;BEIDH=-1;BEIDL=0;BQ=462.40;BSC=16;BSCQ=386.76;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=151.29;EVENT=gridss169_211;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=99;REFPAIR=15;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:75.64:0:3:462.40:16:386.76:0:0.00:16:0.00:0:0.00:0.00:0.00:99:15:0:0.00:0:0.00:0
10	30663459	gridss171_8b	G	GCGAAAGGAGGTGTG.	195.14	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=97.57;BASRP=0;BASSR=5;BEID=asm171-3;BEIDH=-1;BEIDL=0;BQ=195.14;BSC=5;BSCQ=97.57;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=175.04;EVENT=gridss171_8;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=11;REFPAIR=5;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:97.57:0:5:195.14:5:97.57:0:0.00:5:0.00:0:0.00:0.00:0.00:11:5:0:0.00:0:0.00:0
10	50663630	gridss173_5o	A	A[10:50663753[	212.83	LOW_QUAL	AS=1;ASQ=106.41;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm173-212,asm173-45;BEIDH=314,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-25,25;CQ=212.83;EVENT=gridss173_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_5h;RAS=1;RASQ=0.00;REF=250;REFPAIR=20;RP=5;RPQ=106.41;SC=313M1X67N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.41:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:212.83:0.00:250:20:5:106.41:0:0.00:5
10	50663753	gridss173_5h	A	]10:50663630]A	212.83	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm173-212,asm173-45;BEIDH=0,0;BEIDL=314,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-25,25;CIRPOS=-34,34;CQ=212.83;EVENT=gridss173_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_5o;RAS=1;RASQ=106.41;REF=306;REFPAIR=17;RP=5;RPQ=106.41;SC=1X49N1X257M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:212.83:106.41:306:17:5:106.41:0:0.00:5
10	50664616	gridss173_7o	G	G[10:50664694[	63.83	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=42.73;BSC=2;BSCQ=42.73;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-7,8;CQ=63.83;EVENT=gridss173_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_7h;RAS=0;RASQ=0.00;REF=437;REFPAIR=15;RP=3;RPQ=63.83;SB=0.0;SC=101M3D125M1X77N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:42.73:2:42.73:0:0.00:2:0.00:0:0.00:63.83:0.00:437:15:3:63.83:0:0.00:3
10	50664694	gridss173_7h	A	]10:50664616]A	63.83	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-39,39;CQ=63.83;EVENT=gridss173_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_7o;RAS=0;RASQ=0.00;REF=226;REFPAIR=10;RP=3;RPQ=63.83;SC=1X14N1X100M68D124M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.83:0.00:226:10:3:63.83:0:0.00:3
10	50668213	gridss173_16o	T	T[10:50668279[	146.10	LOW_QUAL	AS=1;ASQ=62.36;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm173-268,asm173-48;BEIDH=149,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-38,39;CQ=146.10;EVENT=gridss173_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_16h;RAS=1;RASQ=0.00;REF=377;REFPAIR=28;RP=4;RPQ=83.74;SC=101M17D148M1X40N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.36:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.10:0.00:377:28:4:83.74:0:0.00:4
10	50668279	gridss173_16h	A	]10:50668213]A	146.10	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm173-268,asm173-48;BEIDH=0,0;BEIDL=149,2;BQ=45.97;BSC=2;BSCQ=45.97;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-38,39;CIRPOS=-20,21;CQ=146.10;EVENT=gridss173_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_16o;RAS=1;RASQ=62.36;REF=323;REFPAIR=26;RP=4;RPQ=83.74;SB=1.0;SC=1X76N1X230M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:45.97:2:45.97:0:0.00:2:0.00:0:0.00:146.10:62.36:323:26:4:83.74:0:0.00:4
10	50678427	gridss173_18o	T	T[10:50678577[	189.37	LOW_QUAL	AS=1;ASQ=84.47;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm173-284,asm173-79;BEIDH=210,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-1,1;CQ=189.37;EVENT=gridss173_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_18h;RAS=1;RASQ=0.00;REF=666;REFPAIR=41;RP=5;RPQ=104.89;SC=305M1X1N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.47:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:189.37:0.00:666:41:5:104.89:0:0.00:5
10	50678577	gridss173_18h	A	]10:50678427]A	189.37	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm173-284,asm173-79;BEIDH=0,0;BEIDL=210,2;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-1,1;CQ=189.37;EVENT=gridss173_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_18o;RAS=1;RASQ=84.47;REF=587;REFPAIR=39;RP=5;RPQ=104.89;SB=1.0;SC=1X1N1X174M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:189.37:84.47:587:39:5:104.89:0:0.00:5
10	50724546	gridss173_28o	T	T[10:50724637[	168.26	LOW_QUAL	AS=1;ASQ=62.72;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm173-136,asm173-340;BEIDH=2,109;BEIDL=0,0;BQ=19.56;BSC=1;BSCQ=19.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-6,6;CQ=168.26;EVENT=gridss173_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_28h;RAS=1;RASQ=0.00;REF=394;REFPAIR=35;RP=5;RPQ=105.54;SB=1.0;SC=163M1D122M1X20N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.72:3:0:0:0.00:0:0.00:0.00:0:0:19.56:1:19.56:0:0.00:1:0.00:0:0.00:168.26:0.00:394:35:5:105.54:0:0.00:5
10	50724637	gridss173_28h	A	]10:50724546]A	168.26	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.07;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm173-136,asm173-340;BEIDH=0,0;BEIDL=2,109;BQ=25.13;BSC=1;BSCQ=25.13;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-10,11;CQ=168.26;EVENT=gridss173_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_28o;RAS=1;RASQ=62.72;REF=400;REFPAIR=35;RP=5;RPQ=105.54;SB=0.0;SC=1X11N1X295M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.07:0:0.00:0.00:0:0:25.13:1:25.13:0:0.00:1:0.00:0:0.00:168.26:62.72:400:35:5:105.54:0:0.00:5
10	50724931	gridss173_34o	T	T[10:50725083[	187.85	LOW_QUAL	AS=1;ASQ=83.22;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm173-134,asm173-338;BEIDH=2,113;BEIDL=0,0;BQ=43.24;BSC=2;BSCQ=43.24;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-8,9;CQ=187.85;EVENT=gridss173_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_34h;RAS=1;RASQ=0.00;REF=458;REFPAIR=33;RP=5;RPQ=104.63;SB=0.0;SC=125M40D112M1X18N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.22:4:0:0:0.00:0:0.00:0.00:0:0:43.24:2:43.24:0:0.00:2:0.00:0:0.00:187.85:0.00:458:33:5:104.63:0:0.00:5
10	50725083	gridss173_34h	C	]10:50724931]C	187.85	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm173-134,asm173-338;BEIDH=0,0;BEIDL=2,113;BQ=49.32;BSC=2;BSCQ=49.32;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-9,10;CQ=187.85;EVENT=gridss173_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss173_34o;RAS=1;RASQ=83.22;REF=519;REFPAIR=33;RP=5;RPQ=104.63;SB=0.5;SC=1X16N1X191M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:1:21.41:0:0.00:0.00:0:0:49.32:2:49.32:0:0.00:2:0.00:0:0.00:187.85:83.22:519:33:5:104.63:0:0.00:5
10	69548310	gridss175_5b	G	GAGAAGTC.	152.33	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=76.17;BASRP=0;BASSR=4;BEID=asm175-4;BEIDH=-1;BEIDL=0;BQ=152.33;BSC=4;BSCQ=76.17;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=152.33;EVENT=gridss175_5;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=155;REFPAIR=15;RP=0;RPQ=0.00;SB=0.75;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:76.17:0:4:152.33:4:76.17:0:0.00:4:0.00:0:0.00:0.00:0.00:155:15:0:0.00:0:0.00:0
10	69548313	gridss175_16b	G	.TTCAAGAG	114.33	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.17;BASRP=0;BASSR=3;BEID=asm175-12;BEIDH=-1;BEIDL=7;BQ=114.33;BSC=3;BSCQ=57.17;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=114.33;EVENT=gridss175_16;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=156;REFPAIR=14;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.17:0:3:114.33:3:57.17:0:0.00:3:0.00:0:0.00:0.00:0.00:156:14:0:0.00:0:0.00:0
10	89624563	gridss177_9o	T	T[10:89624778[	232.57	LOW_QUAL	AS=1;ASQ=126.37;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-62,asm177-830;BEIDH=2,151;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-6,7;CQ=232.57;EVENT=gridss177_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_9h;RAS=1;RASQ=0.00;REF=391;REFPAIR=36;RP=5;RPQ=106.20;SC=151M5D138M1X12N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:126.37:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:232.57:0.00:391:36:5:106.20:0:0.00:6
10	89624778	gridss177_9h	T	]10:89624563]T	232.57	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=3;BANRPQ=63.37;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-62,asm177-830;BEIDH=0,0;BEIDL=2,151;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-6,7;CQ=232.57;EVENT=gridss177_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_9o;RAS=1;RASQ=126.37;REF=381;REFPAIR=47;RP=5;RPQ=106.20;SC=1X12N1X189M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:3:63.37:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:232.57:126.37:381:47:5:106.20:0:0.00:6
10	89625011	gridss177_14o	T	T[10:89625076[	126.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.15;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-65;BEIDH=2;BEIDL=0;BQ=54.61;BSC=2;BSCQ=54.61;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-4,5;CQ=167.98;EVENT=gridss177_14;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_14h;RAS=0;RASQ=0.00;REF=659;REFPAIR=61;RP=3;RPQ=63.15;SB=0.0;SC=139M147D1X20N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.15:3:0:0:0.00:0:0.00:0.00:0:0:54.61:2:54.61:0:0.00:2:0.00:0:0.00:126.29:0.00:659:61:3:63.15:0:0.00:3
10	89625076	gridss177_14h	T	]10:89625011]T	126.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-65;BEIDH=0;BEIDL=2;BQ=35.26;BSC=1;BSCQ=35.26;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-10,11;CQ=167.98;EVENT=gridss177_14;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_14o;RAS=1;RASQ=63.15;REF=814;REFPAIR=64;RP=3;RPQ=63.15;SB=1.0;SC=1X8N1X133M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:35.26:1:35.26:0:0.00:1:0.00:0:0.00:126.29:63.15:814:64:3:63.15:0:0.00:3
10	89628410	gridss177_38o	T	T[10:89628483[	230.57	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=125.99;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-63;BEIDH=2;BEIDL=0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-35,35;CQ=210.30;EVENT=gridss177_38;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_38h;RAS=0;RASQ=0.00;REF=522;REFPAIR=38;RP=5;RPQ=104.58;SB=0.0;SC=237M1X69N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:125.99:6:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:230.57:0.00:522:38:5:104.58:0:0.00:6
10	89628483	gridss177_38h	T	]10:89628410]T	230.57	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=5;BANRPQ=104.58;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-63;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-35,35;CQ=210.30;EVENT=gridss177_38;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_38o;RAS=1;RASQ=125.99;REF=501;REFPAIR=35;RP=5;RPQ=104.58;SC=1X69N1X249M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:5:104.58:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:230.57:125.99:501:35:5:104.58:0:0.00:6
10	89628944	gridss177_925b	T	.AAAATTTTAAAGGTTTTTTGAAATTT	241.56	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=63.66;BASRP=0;BASSR=3;BEID=asm177-772;BEIDH=-1;BEIDL=25;BQ=241.56;BSC=8;BSCQ=177.90;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=106.96;EVENT=gridss177_925;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=313;REFPAIR=29;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:63.66:0:3:241.56:8:177.90:0:0.00:8:0.00:0:0.00:0.00:0.00:313:29:0:0.00:0:0.00:0
10	89630905	gridss177_49o	G	G[10:89630947[	250.11	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=145.42;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-108;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-16,17;CIRPOS=-16,17;CQ=250.11;EVENT=gridss177_49;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_49h;RAS=0;RASQ=0.00;REF=546;REFPAIR=37;RP=5;RPQ=104.69;SC=274M1X32N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:145.42:7:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:250.11:0.00:546:37:5:104.69:0:0.00:7
10	89630947	gridss177_49h	T	]10:89630905]T	250.11	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=7;ASSR=0;BA=0;BANRP=4;BANRPQ=83.28;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-108;BEIDH=0;BEIDL=2;BQ=23.05;BSC=1;BSCQ=23.05;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-16,17;CIRPOS=-16,17;CQ=250.11;EVENT=gridss177_49;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_49o;RAS=1;RASQ=145.42;REF=660;REFPAIR=46;RP=5;RPQ=104.69;SB=1.0;SC=1X32N1X332M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:7:0:4:83.28:0:0.00:0.00:0:0:23.05:1:23.05:0:0.00:1:0.00:0:0.00:250.11:145.42:660:46:5:104.69:0:0.00:7
10	89635120	gridss177_60o	T	T[10:89635209[	147.25	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.33;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-171;BEIDH=2;BEIDL=0;BQ=21.52;BSC=1;BSCQ=21.52;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-40,40;CIRPOS=-40,40;CQ=147.25;EVENT=gridss177_60;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_60h;RAS=0;RASQ=0.00;REF=320;REFPAIR=24;RP=3;RPQ=62.92;SB=0.0;SC=227M1X79N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.33:4:0:0:0.00:0:0.00:0.00:0:0:21.52:1:21.52:0:0.00:1:0.00:0:0.00:147.25:0.00:320:24:3:62.92:0:0.00:4
10	89635209	gridss177_60h	T	]10:89635120]T	147.25	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-171;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-40,40;CIRPOS=-40,40;CQ=147.25;EVENT=gridss177_60;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_60o;RAS=1;RASQ=84.33;REF=550;REFPAIR=27;RP=3;RPQ=62.92;SC=1X79N1X164M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.25:84.33:550:27:3:62.92:0:0.00:4
10	89635304	gridss177_62o	G	G[10:89635410[	147.32	LOW_QUAL	AS=1;ASQ=63.07;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-173,asm177-888;BEIDH=2,191;BEIDL=0,0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-44,44;CQ=147.32;EVENT=gridss177_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_62h;RAS=1;RASQ=0.00;REF=132;REFPAIR=9;RP=4;RPQ=84.25;SB=0.0;SC=273M1X33N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.07:3:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:147.32:0.00:132:9:4:84.25:0:0.00:4
10	89635410	gridss177_62h	G	]10:89635304]G	147.32	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-173,asm177-888;BEIDH=0,0;BEIDL=2,191;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-44,44;CIRPOS=-17,17;CQ=147.32;EVENT=gridss177_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_62o;RAS=1;RASQ=63.07;REF=26;REFPAIR=1;RP=4;RPQ=84.25;SC=1X87N1X200M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.32:63.07:26:1:4:84.25:0:0.00:4
10	89635780	gridss177_64o	G	G[10:89635838[	168.19	LOW_QUAL	AS=1;ASQ=62.85;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-169,asm177-886;BEIDH=2,149;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-21,22;CQ=146.91;EVENT=gridss177_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_64h;RAS=1;RASQ=0.00;REF=170;REFPAIR=11;RP=5;RPQ=105.34;SC=101M59D148M1X31N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.85:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:168.19:0.00:170:11:5:105.34:0:0.00:5
10	89635838	gridss177_64h	T	]10:89635780]T	168.19	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-169,asm177-886;BEIDH=0,0;BEIDL=2,149;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-21,22;CIRPOS=-16,16;CQ=146.91;EVENT=gridss177_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_64o;RAS=1;RASQ=62.85;REF=204;REFPAIR=10;RP=5;RPQ=105.34;SC=1X42N1X100M4D160M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:168.19:62.85:204:10:5:105.34:0:0.00:5
10	89636696	gridss177_376b	T	TTTACGAAAAACATTTTGAAAATTTTCAGTTTATTTTGTGGGGAAAAGAGTTTGGTTTATT.	763.35	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=220.29;BASRP=0;BASSR=8;BEID=asm177-123,asm177-124;BEIDH=-1,-1;BEIDL=0,0;BQ=763.35;BSC=20;BSCQ=543.06;BUM=0;BUMQ=0.00;BVF=20;CAS=0;CASQ=0.00;CQ=440.59;EVENT=gridss177_376;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=51;REFPAIR=18;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:220.29:0:8:763.35:20:543.06:0:0.00:20:0.00:0:0.00:0.00:0.00:51:18:0:0.00:0:0.00:0
10	89638705	gridss177_73o	C	C[10:89638820[	232.13	LOW_QUAL	AS=1;ASQ=126.19;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-170,asm177-953;BEIDH=2,227;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-40,41;CIRPOS=-31,31;CQ=232.13;EVENT=gridss177_73;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_73h;RAS=1;RASQ=0.00;REF=226;REFPAIR=16;RP=5;RPQ=105.94;SC=226M1X80N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:126.19:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:232.13:0.00:226:16:5:105.94:0:0.00:6
10	89638820	gridss177_73h	C	]10:89638705]C	232.13	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-170,asm177-953;BEIDH=0,0;BEIDL=2,227;BQ=91.05;BSC=4;BSCQ=91.05;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-31,31;CIRPOS=-40,41;CQ=232.13;EVENT=gridss177_73;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_73o;RAS=1;RASQ=126.19;REF=326;REFPAIR=27;RP=5;RPQ=105.94;SB=0.25;SC=1X61N1X303M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:91.05:4:91.05:0:0.00:4:0.00:0:0.00:232.13:126.19:326:27:5:105.94:0:0.00:6
10	89639923	gridss177_77o	T	T[10:89640056[	167.41	LOW_QUAL	AS=1;ASQ=83.71;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-218,asm177-954;BEIDH=2,174;BEIDL=0,0;BQ=90.38;BSC=4;BSCQ=90.38;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=167.41;EVENT=gridss177_77;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_77h;RAS=1;RASQ=0.00;REF=435;REFPAIR=46;RP=4;RPQ=83.71;SB=0.25;SC=101M24D173M1X8N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.71:4:0:0:0.00:0:0.00:0.00:0:0:90.38:4:90.38:0:0.00:4:0.00:0:0.00:167.41:0.00:435:46:4:83.71:0:0.00:4
10	89640036	gridss177_1016b	T	.AGTGTGGTAATTTTTTTTTT	272.68	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=81.02;BASRP=0;BASSR=4;BEID=asm177-912;BEIDH=-1;BEIDL=19;BQ=272.68;BSC=8;BSCQ=191.66;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=216.29;EVENT=gridss177_1016;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=233;REFPAIR=28;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:81.02:0:4:272.68:8:191.66:0:0.00:8:0.00:0:0.00:0.00:0.00:233:28:0:0.00:0:0.00:0
10	89640051	gridss177_403b	T	TTTCAAATTGAGGTTTTTTTGTTAAATTAAAGAGTTTGTAATATTGCTTTCAAGGAGAAAACTTTCTAACAA.	405.05	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=127.99;BASRP=0;BASSR=5;BEID=asm177-197;BEIDH=-1;BEIDL=0;BQ=405.05;BSC=11;BSCQ=277.06;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=282.05;EVENT=gridss177_403;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=237;REFPAIR=37;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:127.99:0:5:405.05:11:277.06:0:0.00:11:0.00:0:0.00:0.00:0.00:237:37:0:0.00:0:0.00:0
10	89640056	gridss177_77h	G	]10:89639923]G	167.41	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-218,asm177-954;BEIDH=0,0;BEIDL=2,174;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=167.41;EVENT=gridss177_77;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_77o;RAS=1;RASQ=83.71;REF=234;REFPAIR=37;RP=4;RPQ=83.71;SC=1X8N1X195M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.41:83.71:234:37:4:83.71:0:0.00:4
10	89653712	gridss177_89o	T	T[10:89653894[	144.40	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=82.41;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-284;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=144.40;EVENT=gridss177_89;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_89h;RAS=0;RASQ=0.00;REF=282;REFPAIR=22;RP=3;RPQ=61.99;SC=101M74D115M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:82.41:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:144.40:0.00:282:22:3:61.99:0:0.00:4
10	89653894	gridss177_89h	A	]10:89653712]A	144.40	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=2;BANRPQ=40.58;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-284;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=144.40;EVENT=gridss177_89;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_89o;RAS=1;RASQ=82.41;REF=204;REFPAIR=27;RP=3;RPQ=61.99;SC=1X16N1X172M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:2:40.58:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:144.40:82.41:204:27:3:61.99:0:0.00:4
10	89654211	gridss177_95o	T	T[10:89654274[	314.22	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=188.27;ASRP=9;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-283;BEIDH=2;BEIDL=0;BQ=41.67;BSC=2;BSCQ=41.67;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-20,21;CQ=314.22;EVENT=gridss177_95;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_95h;RAS=0;RASQ=0.00;REF=374;REFPAIR=29;RP=6;RPQ=125.95;SB=0.0;SC=266M1X40N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=9	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:188.27:9:0:0:0.00:0:0.00:0.00:0:0:41.67:2:41.67:0:0.00:2:0.00:0:0.00:314.22:0.00:374:29:6:125.95:0:0.00:9
10	89654274	gridss177_95h	A	]10:89654211]A	314.22	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=9;ASSR=0;BA=0;BANRP=6;BANRPQ=125.95;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-283;BEIDH=0;BEIDL=2;BQ=19.56;BSC=1;BSCQ=19.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-20,21;CQ=314.22;EVENT=gridss177_95;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_95o;RAS=1;RASQ=188.27;REF=315;REFPAIR=28;RP=6;RPQ=125.95;SB=1.0;SC=1X40N1X377M;SR=0;SRQ=0.00;SVTYPE=BND;VF=9	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:9:0:6:125.95:0:0.00:0.00:0:0:19.56:1:19.56:0:0.00:1:0.00:0:0.00:314.22:188.27:315:28:6:125.95:0:0.00:9
10	89655377	gridss177_100o	G	G[10:89655551[	128.21	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=64.11;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-286;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-38,38;CIRPOS=-38,38;CQ=128.21;EVENT=gridss177_100;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_100h;RAS=0;RASQ=0.00;REF=239;REFPAIR=14;RP=3;RPQ=64.11;SC=101M19D111M1X75N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.11:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:128.21:0.00:239:14:3:64.11:0:0.00:3
10	89655551	gridss177_100h	T	]10:89655377]T	128.21	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-286;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-38,38;CIRPOS=-38,38;CQ=128.21;EVENT=gridss177_100;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_100o;RAS=1;RASQ=64.11;REF=407;REFPAIR=20;RP=3;RPQ=64.11;SC=1X75N1X136M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:128.21:64.11:407:20:3:64.11:0:0.00:3
10	89676001	gridss177_116o	T	T[10:89676165[	210.29	LOW_QUAL	AS=1;ASQ=105.14;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1080,asm177-332;BEIDH=208,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=210.29;EVENT=gridss177_116;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_116h;RAS=1;RASQ=0.00;REF=469;REFPAIR=15;RP=5;RPQ=105.14;SC=208M44D118M1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.14:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:210.29:0.00:469:15:5:105.14:0:0.00:5
10	89676165	gridss177_116h	T	]10:89676001]T	210.29	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1080,asm177-332;BEIDH=0,0;BEIDL=208,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=210.29;EVENT=gridss177_116;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_116o;RAS=1;RASQ=105.14;REF=230;REFPAIR=17;RP=5;RPQ=105.14;SC=1X9N1X145M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:210.29:105.14:230:17:5:105.14:0:0.00:5
10	89685539	gridss177_127o	T	T[10:89685721[	232.44	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=126.57;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-370;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-17,18;CIRPOS=-5,5;CQ=232.44;EVENT=gridss177_127;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_127h;RAS=0;RASQ=0.00;REF=643;REFPAIR=42;RP=5;RPQ=105.86;SC=275M1X34N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:126.57:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:232.44:0.00:643:42:5:105.86:0:0.00:6
10	89685721	gridss177_127h	A	]10:89685539]A	232.44	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-370;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-17,18;CQ=232.44;EVENT=gridss177_127;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_127o;RAS=1;RASQ=126.57;REF=527;REFPAIR=55;RP=5;RPQ=105.86;SC=1X9N1X181M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:232.44:126.57:527:55:5:105.86:0:0.00:6
10	89685778	gridss177_131o	T	T[10:89685887[	63.07	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-52,53;CQ=84.48;EVENT=gridss177_131;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_131h;RAS=0;RASQ=0.00;REF=639;REFPAIR=44;RP=3;RPQ=63.07;SC=101M33D169M1X3N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.07:0.00:639:44:3:63.07:0:0.00:3
10	89685887	gridss177_131h	T	]10:89685778]T	63.07	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=62.71;BSC=3;BSCQ=62.71;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-52,53;CIRPOS=-2,2;CQ=84.48;EVENT=gridss177_131;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_131o;RAS=0;RASQ=0.00;REF=327;REFPAIR=18;RP=3;RPQ=63.07;SB=0.6666667;SC=1X104N1X4D198M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:62.71:3:62.71:0:0.00:3:0.00:0:0.00:63.07:0.00:327:18:3:63.07:0:0.00:3
10	89687816	gridss177_138o	A	A[10:89687947[	168.87	LOW_QUAL	AS=1;ASQ=84.43;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1138,asm177-420;BEIDH=137,2;BEIDL=0,0;BQ=47.22;BSC=2;BSCQ=47.22;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-44,45;CIRPOS=-44,45;CQ=168.87;EVENT=gridss177_138;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_138h;RAS=1;RASQ=0.00;REF=275;REFPAIR=15;RP=4;RPQ=84.43;SB=0.5;SC=218M1X88N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.43:4:0:0:0.00:0:0.00:0.00:0:0:47.22:2:47.22:0:0.00:2:0.00:0:0.00:168.87:0.00:275:15:4:84.43:0:0.00:4
10	89687947	gridss177_138h	T	]10:89687816]T	168.87	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1138,asm177-420;BEIDH=0,0;BEIDL=137,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-44,45;CIRPOS=-44,45;CQ=168.87;EVENT=gridss177_138;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_138o;RAS=1;RASQ=84.43;REF=250;REFPAIR=14;RP=4;RPQ=84.43;SC=1X88N1X168M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:168.87:84.43:250:14:4:84.43:0:0.00:4
10	89689169	gridss177_144o	T	T[10:89689227[	145.99	LOW_QUAL	AS=1;ASQ=62.67;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1139,asm177-422;BEIDH=217,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-35,36;CQ=145.99;EVENT=gridss177_144;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_144h;RAS=1;RASQ=0.00;REF=533;REFPAIR=39;RP=4;RPQ=83.32;SC=305M1X1N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.67:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:145.99:0.00:533:39:4:83.32:0:0.00:4
10	89689227	gridss177_144h	T	]10:89689169]T	145.99	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1139,asm177-422;BEIDH=0,0;BEIDL=217,2;BQ=28.87;BSC=1;BSCQ=28.87;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-1,1;CQ=145.99;EVENT=gridss177_144;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_144o;RAS=1;RASQ=62.67;REF=335;REFPAIR=26;RP=4;RPQ=83.32;SB=1.0;SC=1X70N1X236M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:28.87:1:28.87:0:0.00:1:0.00:0:0.00:145.99:62.67:335:26:4:83.32:0:0.00:4
10	89717618	gridss177_191o	T	T[10:89717754[	190.59	LOW_QUAL	AS=1;ASQ=85.27;ASRP=4;ASSR=0;BA=0;BANRP=1;BANRPQ=21.20;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1369,asm177-577;BEIDH=222,2;BEIDL=0,0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-43,43;CIRPOS=-43,43;CQ=149.14;EVENT=gridss177_191;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_191h;RAS=1;RASQ=0.00;REF=394;REFPAIR=23;RP=5;RPQ=105.31;SB=1.0;SC=221M1X85N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:85.27:4:0:1:21.20:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:190.59:0.00:394:23:5:105.31:0:0.00:6
10	89717754	gridss177_191h	A	]10:89717618]A	190.59	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1369,asm177-577;BEIDH=0,0;BEIDL=222,2;BQ=60.65;BSC=2;BSCQ=60.65;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-43,43;CIRPOS=-43,43;CQ=149.14;EVENT=gridss177_191;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_191o;RAS=1;RASQ=85.27;REF=264;REFPAIR=24;RP=5;RPQ=105.31;SB=1.0;SC=1X85N1X241M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:60.65:2:60.65:0:0.00:2:0.00:0:0.00:190.59:85.27:264:24:5:105.31:0:0.00:6
10	89718138	gridss177_1342b	C	.TTTATTTTATTTTTC	385.59	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=58.38;BASRP=0;BASSR=3;BEID=asm177-1335;BEIDH=-1;BEIDL=14;BQ=385.59;BSC=12;BSCQ=327.21;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=123.02;EVENT=gridss177_1342;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=217;REFPAIR=27;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:58.38:0:3:385.59:12:327.21:0:0.00:12:0.00:0:0.00:0.00:0.00:217:27:0:0.00:0:0.00:0
10	89726158	gridss177_206o	C	C[10:89726351[	106.13	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.52;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-670;BEIDH=2;BEIDL=0;BQ=24.53;BSC=1;BSCQ=24.53;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-13,14;CQ=106.13;EVENT=gridss177_206;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_206h;RAS=0;RASQ=0.00;REF=543;REFPAIR=38;RP=2;RPQ=42.61;SB=0.0;SC=101M79D100M1X26N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.52:3:0:0:0.00:0:0.00:0.00:0:0:24.53:1:24.53:0:0.00:1:0.00:0:0.00:106.13:0.00:543:38:2:42.61:0:0.00:3
10	89726351	gridss177_206h	C	]10:89726158]C	106.13	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-670;BEIDH=0;BEIDL=2;BQ=27.54;BSC=1;BSCQ=27.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-13,14;CQ=106.13;EVENT=gridss177_206;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_206o;RAS=1;RASQ=63.52;REF=289;REFPAIR=16;RP=2;RPQ=42.61;SB=1.0;SC=1X26N1X176M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:27.54:1:27.54:0:0.00:1:0.00:0:0.00:106.13:63.52:289:16:2:42.61:0:0.00:3
10	89726688	gridss177_777b	T	TTTTTATTTTCAGTGTTGAATTATTTTTTTTTTGTTTTCCCCCCGGGTGGGCCAGGGGGCTCAATT.	878.61	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=286.13;BASRP=0;BASSR=11;BEID=asm177-620;BEIDH=-1;BEIDL=0;BQ=878.61;BSC=23;BSCQ=592.48;BUM=0;BUMQ=0.00;BVF=23;CAS=0;CASQ=0.00;CQ=572.25;EVENT=gridss177_777;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=66;REFPAIR=23;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:286.13:0:11:878.61:23:592.48:0:0.00:23:0.00:0:0.00:0.00:0.00:66:23:0:0.00:0:0.00:0
10	89727287	gridss177_211o	A	A[10:89727397[	166.58	LOW_QUAL	AS=1;ASQ=83.29;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1450,asm177-669;BEIDH=158,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-15,16;CQ=166.58;EVENT=gridss177_211;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_211h;RAS=1;RASQ=0.00;REF=221;REFPAIR=12;RP=4;RPQ=83.29;SC=101M18D157M1X30N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.29:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:166.58:0.00:221:12:4:83.29:0:0.00:4
10	89727397	gridss177_211h	G	]10:89727287]G	166.58	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1450,asm177-669;BEIDH=0,0;BEIDL=158,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-15,16;CQ=166.58;EVENT=gridss177_211;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_211o;RAS=1;RASQ=83.29;REF=263;REFPAIR=26;RP=4;RPQ=83.29;SC=1X30N1X183M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:166.58:83.29:263:26:4:83.29:0:0.00:4
10	89728692	gridss177_801b	A	AATGGTCTAAAGATAAATTATTTGTTTTCTCTATTTTTATTAATAAAAAAAAATTT.	714.05	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=153.80;BASRP=0;BASSR=6;BEID=asm177-628,asm177-630;BEIDH=-1,-1;BEIDL=0,0;BQ=714.05;BSC=22;BSCQ=560.25;BUM=0;BUMQ=0.00;BVF=22;CAS=0;CASQ=0.00;CQ=480.39;EVENT=gridss177_801;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=53;REFPAIR=14;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:153.80:0:6:714.05:22:560.25:0:0.00:22:0.00:0:0.00:0.00:0.00:53:14:0:0.00:0:0.00:0
10	115540996	gridss179_10b	A	ACCTCCTTCCCCAA.	382.44	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=137.83;BASRP=0;BASSR=7;BEID=asm179-4;BEIDH=-1;BEIDL=0;BQ=382.44;BSC=12;BSCQ=244.61;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=295.63;EVENT=gridss179_10;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=100;REFPAIR=31;RP=0;RPQ=0.00;SB=0.57894737;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:137.83:0:7:382.44:12:244.61:0:0.00:12:0.00:0:0.00:0.00:0.00:100:31:0:0.00:0:0.00:0
10	115541018	gridss179_12b	C	CCAACACTGCCTT.	215.32	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=97.48;BASRP=0;BASSR=5;BEID=asm179-3;BEIDH=-1;BEIDL=0;BQ=215.32;BSC=6;BSCQ=117.84;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=215.32;EVENT=gridss179_12;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=19;REFPAIR=34;RP=0;RPQ=0.00;SB=0.18181819;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:97.48:0:5:215.32:6:117.84:0:0.00:6:0.00:0:0.00:0.00:0.00:19:34:0:0.00:0:0.00:0
10	116594882	gridss179_24b	G	.GAAAGTTG	417.08	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=208.54;BASRP=0;BASSR=11;BEID=asm179-22;BEIDH=-1;BEIDL=7;BQ=417.08;BSC=11;BSCQ=208.54;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=417.08;EVENT=gridss179_24;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=174;REFPAIR=17;RP=0;RPQ=0.00;SB=0.54545456;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:208.54:0:11:417.08:11:208.54:0:0.00:9:0.00:0:0.00:0.00:0.00:174:17:0:0.00:0:0.00:0
10	123215328	gridss180_38b	T	.TTTTATATACATCCCTTTTTTTTTAAAAAACCACATGAATACAAATTTACAAACTTCCCCTCCTTTTTTTT	1600.37	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=659.44;BASRP=0;BASSR=26;BEID=asm180-24,asm180-25;BEIDH=-1,-1;BEIDL=70,59;BQ=1600.37;BSC=36;BSCQ=940.93;BUM=0;BUMQ=0.00;BVF=37;CAS=0;CASQ=0.00;CQ=1488.68;EVENT=gridss180_38;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=119;REFPAIR=49;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:659.44:0:26:1600.37:36:940.93:0:0.00:37:0.00:0:0.00:0.00:0.00:119:49:0:0.00:0:0.00:0
10	123215349	gridss180_10b	T	TTTTTTTAGTTGGGTTTTTTTT.	183.37	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=81.51;BASRP=0;BASSR=4;BEID=asm180-7;BEIDH=-1;BEIDL=0;BQ=183.37;BSC=5;BSCQ=101.86;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=183.37;EVENT=gridss180_10;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=65;REFPAIR=14;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:81.51:0:4:183.37:5:101.86:0:0.00:5:0.00:0:0.00:0.00:0.00:65:14:0:0.00:0:0.00:0
11	5079403	gridss182_28b	A	.ACCCGGCAA	114.31	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.15;BASRP=0;BASSR=3;BEID=asm182-24;BEIDH=-1;BEIDL=8;BQ=114.31;BSC=3;BSCQ=57.15;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=114.31;EVENT=gridss182_28;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=15;REFPAIR=0;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.15:0:3:114.31:3:57.15:0:0.00:3:0.00:0:0.00:0.00:0.00:15:0:0:0.00:0:0.00:0
11	22645018	gridss184_4o	T	T[11:22645085[	63.80	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm184-71;BEIDH=172;BEIDL=0;BQ=41.45;BSC=2;BSCQ=41.45;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-29,30;CIRPOS=-24,25;CQ=63.80;EVENT=gridss184_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss184_4h;RAS=1;RASQ=0.00;REF=242;REFPAIR=22;RP=3;RPQ=63.80;SB=0.5;SC=101M32D115M1X58N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:41.45:2:41.45:0:0.00:2:0.00:0:0.00:63.80:0.00:242:22:3:63.80:0:0.00:3
11	22645085	gridss184_4h	C	]11:22645018]C	63.80	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm184-71;BEIDH=0;BEIDL=172;BQ=29.76;BSC=1;BSCQ=29.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-24,25;CIRPOS=-29,30;CQ=63.80;EVENT=gridss184_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss184_4o;RAS=0;RASQ=0.00;REF=211;REFPAIR=16;RP=3;RPQ=63.80;SB=0.0;SC=1X48N1X100M49D109M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:29.76:1:29.76:0:0.00:1:0.00:0:0.00:63.80:0.00:211:16:3:63.80:0:0.00:3
11	22645759	gridss184_7o	A	A[11:22645974[	167.93	LOW_QUAL	AS=1;ASQ=83.96;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm184-22,asm184-69;BEIDH=2,139;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-12,13;CQ=147.23;EVENT=gridss184_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss184_7h;RAS=1;RASQ=0.00;REF=253;REFPAIR=17;RP=4;RPQ=83.96;SC=88M88D106M1X24N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.96:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.93:0.00:253:17:4:83.96:0:0.00:4
11	22645974	gridss184_7h	G	]11:22645759]G	167.93	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm184-22,asm184-69;BEIDH=0,0;BEIDL=2,139;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-12,13;CQ=147.23;EVENT=gridss184_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss184_7o;RAS=1;RASQ=83.96;REF=284;REFPAIR=11;RP=4;RPQ=83.96;SC=1X24N1X147M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.93:83.96:284:11:4:83.96:0:0.00:4
11	61068589	gridss187_4o	A	A[11:61068745[	84.77	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-39,39;CQ=84.77;EVENT=gridss187_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_4h;RAS=0;RASQ=0.00;REF=297;REFPAIR=31;RP=4;RPQ=84.77;SC=141M32D126M1X7N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.77:0.00:297:31:4:84.77:0:0.00:4
11	61068745	gridss187_4h	A	]11:61068589]A	84.77	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-4,4;CQ=84.77;EVENT=gridss187_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_4o;RAS=0;RASQ=0.00;REF=301;REFPAIR=19;RP=4;RPQ=84.77;SC=1X77N1X229M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.77:0.00:301:19:4:84.77:0:0.00:4
11	61069889	gridss187_9o	T	T[11:61069967[	168.54	LOW_QUAL	AS=1;ASQ=83.96;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm187-293,asm187-46;BEIDH=287,2;BEIDL=0,0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-23,24;CQ=168.54;EVENT=gridss187_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_9h;RAS=1;RASQ=0.00;REF=459;REFPAIR=31;RP=4;RPQ=84.58;SB=0.0;SC=282M1X63N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.96:4:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:168.54:0.00:459:31:4:84.58:0:0.00:5
11	61069967	gridss187_9h	T	]11:61069889]T	168.54	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm187-293,asm187-46;BEIDH=0,0;BEIDL=287,2;BQ=30.19;BSC=1;BSCQ=30.19;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-23,24;CIRPOS=-32,32;CQ=168.54;EVENT=gridss187_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_9o;RAS=1;RASQ=83.96;REF=437;REFPAIR=25;RP=4;RPQ=84.58;SB=1.0;SC=1X46N1X301M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:30.19:1:30.19:0:0.00:1:0.00:0:0.00:168.54:83.96:437:25:4:84.58:0:0.00:5
11	61070049	gridss187_12o	C	C[11:61070263[	105.01	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.62;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm187-47;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-18,19;CIRPOS=-18,19;CQ=105.01;EVENT=gridss187_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_12h;RAS=0;RASQ=0.00;REF=516;REFPAIR=28;RP=2;RPQ=42.39;SC=101M69D100M1X36N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.62:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:105.01:0.00:516:28:2:42.39:0:0.00:3
11	61070263	gridss187_12h	T	]11:61070049]T	105.01	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm187-47;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-18,19;CIRPOS=-18,19;CQ=105.01;EVENT=gridss187_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_12o;RAS=1;RASQ=62.62;REF=444;REFPAIR=37;RP=2;RPQ=42.39;SC=1X36N1X116M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:105.01:62.62:444:37:2:42.39:0:0.00:3
11	61078789	gridss187_138b	A	ACATAA.	112.05	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=56.03;BASRP=0;BASSR=3;BEID=asm187-65;BEIDH=-1;BEIDL=0;BQ=112.05;BSC=3;BSCQ=56.03;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=112.05;EVENT=gridss187_138;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=21;REFPAIR=4;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:56.03:0:3:112.05:3:56.03:0:0.00:3:0.00:0:0.00:0.00:0.00:21:4:0:0.00:0:0.00:0
11	61081853	gridss187_24o	T	T[11:61081977[	63.93	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-2,2;CQ=63.93;EVENT=gridss187_24;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_24h;RAS=0;RASQ=0.00;REF=373;REFPAIR=28;RP=3;RPQ=63.93;SC=152M14D100M1X69N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.93:0.00:373:28:3:63.93:0:0.00:3
11	61081977	gridss187_24h	A	]11:61081853]A	63.93	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=2;BANRPQ=42.65;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-35,35;CQ=63.93;EVENT=gridss187_24;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_24o;RAS=0;RASQ=0.00;REF=320;REFPAIR=26;RP=3;RPQ=63.93;SC=1X3N1X100M16D101M14D72M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:2:42.65:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.93:0.00:320:26:3:63.93:0:0.00:3
11	61082316	gridss187_165b	T	TGTGAAAGAGTTTCTTTTTT.	162.26	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=61.37;BASRP=0;BASSR=3;BEID=asm187-92;BEIDH=-1;BEIDL=0;BQ=162.26;BSC=5;BSCQ=100.89;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=122.73;EVENT=gridss187_165;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=132;REFPAIR=8;RP=0;RPQ=0.00;SB=0.875;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:61.37:0:3:162.26:5:100.89:0:0.00:5:0.00:0:0.00:0.00:0.00:132:8:0:0.00:0:0.00:0
11	61089020	gridss187_33o	A	A[11:61089092[	62.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-58,59;CQ=62.32;EVENT=gridss187_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_33h;RAS=0;RASQ=0.00;REF=357;REFPAIR=21;RP=3;RPQ=62.32;SC=101M103D100M1X2N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.32:0.00:357:21:3:62.32:0:0.00:3
11	61089092	gridss187_33h	G	]11:61089020]G	62.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=20.25;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=21.39;BSC=1;BSCQ=21.39;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-58,59;CIRPOS=-1,2;CQ=62.32;EVENT=gridss187_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_33o;RAS=0;RASQ=0.00;REF=317;REFPAIR=18;RP=3;RPQ=62.32;SB=0.0;SC=1X116N1X193M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:20.25:0:0.00:0.00:0:0:21.39:1:21.39:0:0.00:1:0.00:0:0.00:62.32:0.00:317:18:3:62.32:0:0.00:3
11	61089255	gridss187_35o	C	C[11:61089358[	149.15	LOW_QUAL	AS=1;ASQ=63.87;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm187-181,asm187-445;BEIDH=2,140;BEIDL=0,0;BQ=45.50;BSC=1;BSCQ=45.50;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-25,26;CIRPOS=-21,22;CQ=149.15;EVENT=gridss187_35;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_35h;RAS=1;RASQ=0.00;REF=306;REFPAIR=17;RP=4;RPQ=85.28;SB=1.0;SC=101M16D139M1X50N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.87:3:0:0:0.00:0:0.00:0.00:0:0:45.50:1:45.50:0:0.00:1:0.00:0:0.00:149.15:0.00:306:17:4:85.28:0:0.00:4
11	61089358	gridss187_35h	A	]11:61089255]A	149.15	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm187-181,asm187-445;BEIDH=0,0;BEIDL=2,140;BQ=26.07;BSC=1;BSCQ=26.07;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-21,22;CIRPOS=-25,26;CQ=149.15;EVENT=gridss187_35;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_35o;RAS=1;RASQ=63.87;REF=296;REFPAIR=25;RP=4;RPQ=85.28;SB=1.0;SC=1X42N1X264M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.41:0:0.00:0.00:0:0:26.07:1:26.07:0:0.00:1:0.00:0:0.00:149.15:63.87:296:25:4:85.28:0:0.00:4
11	61090021	gridss187_40o	C	C[11:61090061[	62.94	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=37.74;BSC=1;BSCQ=37.74;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-9,9;CQ=62.94;EVENT=gridss187_40;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_40h;RAS=0;RASQ=0.00;REF=385;REFPAIR=33;RP=3;RPQ=62.94;SB=1.0;SC=101M51D128M1X26N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:37.74:1:37.74:0:0.00:1:0.00:0:0.00:62.94:0.00:385:33:3:62.94:0:0.00:3
11	61090061	gridss187_40h	G	]11:61090021]G	62.94	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-13,14;CQ=62.94;EVENT=gridss187_40;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_40o;RAS=0;RASQ=0.00;REF=440;REFPAIR=27;RP=3;RPQ=62.94;SC=1X17N1X100M70D119M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.94:0.00:440:27:3:62.94:0:0.00:3
11	61093262	gridss187_47o	G	G[11:61093460[	166.94	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.47;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm187-177;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-11,11;CQ=146.71;EVENT=gridss187_47;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_47h;RAS=0;RASQ=0.00;REF=310;REFPAIR=25;RP=4;RPQ=83.47;SC=101M6D178M1X21N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.47:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:166.94:0.00:310:25:4:83.47:0:0.00:4
11	61093460	gridss187_47h	C	]11:61093262]C	166.94	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm187-177;BEIDH=0;BEIDL=2;BQ=38.51;BSC=1;BSCQ=38.51;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-11,11;CQ=146.71;EVENT=gridss187_47;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_47o;RAS=1;RASQ=83.47;REF=303;REFPAIR=19;RP=4;RPQ=83.47;SB=1.0;SC=1X21N1X167M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:38.51:1:38.51:0:0.00:1:0.00:0:0.00:166.94:83.47:303:19:4:83.47:0:0.00:4
11	61099585	gridss187_489b	A	.AAGAAA	261.46	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=130.73;BASRP=0;BASSR=7;BEID=asm187-487;BEIDH=-1;BEIDL=5;BQ=261.46;BSC=7;BSCQ=130.73;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=261.46;EVENT=gridss187_489;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=303;REFPAIR=29;RP=0;RPQ=0.00;SB=0.5714286;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:130.73:0:7:261.46:7:130.73:0:0.00:7:0.00:0:0.00:0.00:0.00:303:29:0:0.00:0:0.00:0
11	61099586	gridss187_265b	A	AAAGTCCGAG.	152.45	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=76.23;BASRP=0;BASSR=4;BEID=asm187-214;BEIDH=-1;BEIDL=0;BQ=152.45;BSC=4;BSCQ=76.23;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=152.45;EVENT=gridss187_265;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=315;REFPAIR=25;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:76.23:0:4:152.45:4:76.23:0:0.00:4:0.00:0:0.00:0.00:0.00:315:25:0:0.00:0:0.00:0
11	61099600	gridss187_56o	A	A[11:61099746[	148.82	LOW_QUAL	AS=1;ASQ=64.23;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm187-234,asm187-505;BEIDH=2,185;BEIDL=0,0;BQ=42.49;BSC=2;BSCQ=42.49;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-51,52;CIRPOS=-61,62;CQ=148.82;EVENT=gridss187_56;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_56h;RAS=1;RASQ=0.00;REF=256;REFPAIR=18;RP=4;RPQ=84.58;SB=0.5;SC=204M1X102N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.23:3:0:0:0.00:0:0.00:0.00:0:0:42.49:2:42.49:0:0.00:2:0.00:0:0.00:148.82:0.00:256:18:4:84.58:0:0.00:4
11	61099746	gridss187_56h	T	]11:61099600]T	148.82	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm187-234,asm187-505;BEIDH=0,0;BEIDL=2,185;BQ=87.43;BSC=3;BSCQ=87.43;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-61,62;CIRPOS=-51,52;CQ=148.82;EVENT=gridss187_56;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_56o;RAS=1;RASQ=64.23;REF=370;REFPAIR=21;RP=4;RPQ=84.58;SB=0.6666667;SC=1X122N1X127M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:87.43:3:87.43:0:0.00:3:0.00:0:0.00:148.82:64.23:370:21:4:84.58:0:0.00:4
11	94151337	gridss191_7o	A	A[11:94151393[	63.41	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-25,26;CIRPOS=-12,12;CQ=63.41;EVENT=gridss191_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_7h;RAS=0;RASQ=0.00;REF=173;REFPAIR=13;RP=3;RPQ=63.41;SC=101M19D136M1X50N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.41:0.00:173:13:3:63.41:0:0.00:3
11	94151393	gridss191_7h	T	]11:94151337]T	63.41	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,12;CIRPOS=-25,26;CQ=63.41;EVENT=gridss191_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_7o;RAS=0;RASQ=0.00;REF=290;REFPAIR=18;RP=3;RPQ=63.41;SC=1X23N1X100M62D121M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.41:0.00:290:18:3:63.41:0:0.00:3
11	94154629	gridss191_17o	T	T[11:94154721[	167.34	LOW_QUAL	AS=1;ASQ=83.67;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-437,asm191-55;BEIDH=140,2;BEIDL=0,0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-23,23;CQ=167.34;EVENT=gridss191_17;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_17h;RAS=1;RASQ=0.00;REF=137;REFPAIR=9;RP=4;RPQ=83.67;SB=0.0;SC=101M7D139M1X69N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.67:4:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:167.34:0.00:137:9:4:83.67:0:0.00:4
11	94154721	gridss191_17h	T	]11:94154629]T	167.34	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=1;BANRPQ=21.35;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-437,asm191-55;BEIDH=0,0;BEIDL=140,2;BQ=124.24;BSC=5;BSCQ=124.24;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-35,35;CQ=167.34;EVENT=gridss191_17;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_17o;RAS=1;RASQ=83.67;REF=309;REFPAIR=21;RP=4;RPQ=83.67;SB=0.4;SC=1X45N1X214M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:1:21.35:0:0.00:0.00:0:0:124.24:5:124.24:0:0.00:4:0.00:0:0.00:167.34:83.67:309:21:4:83.67:0:0.00:4
11	94155713	gridss191_472b	A	.AAGCTACA	230.22	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=115.11;BASRP=0;BASSR=6;BEID=asm191-420;BEIDH=-1;BEIDL=7;BQ=230.22;BSC=6;BSCQ=115.11;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=210.12;EVENT=gridss191_472;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=165;REFPAIR=11;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:115.11:0:6:230.22:6:115.11:0:0.00:6:0.00:0:0.00:0.00:0.00:165:11:0:0.00:0:0.00:0
11	94169141	gridss191_24o	T	T[11:94169219[	63.95	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=36.04;BSC=1;BSCQ=36.04;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-7,8;CQ=63.95;EVENT=gridss191_24;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_24h;RAS=0;RASQ=0.00;REF=242;REFPAIR=24;RP=3;RPQ=63.95;SB=0.0;SC=120M77D98M1X11N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:36.04:1:36.04:0:0.00:1:0.00:0:0.00:63.95:0.00:242:24:3:63.95:0:0.00:3
11	94169219	gridss191_24h	T	]11:94169141]T	63.95	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=2;BANRPQ=42.62;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-6,6;CQ=63.95;EVENT=gridss191_24;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_24o;RAS=0;RASQ=0.00;REF=383;REFPAIR=24;RP=3;RPQ=63.95;SC=1X14N1X109M84D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:2:42.62:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.95:0.00:383:24:3:63.95:0:0.00:3
11	94173611	gridss191_210b	A	AATTTCAAAGGGCATGAAAAAGCT.	224.06	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=112.03;BASRP=0;BASSR=5;BEID=asm191-126;BEIDH=-1;BEIDL=0;BQ=224.06;BSC=5;BSCQ=112.03;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=224.06;EVENT=gridss191_210;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=118;REFPAIR=14;RP=0;RPQ=0.00;SB=0.8;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:112.03:0:5:224.06:5:112.03:0:0.00:5:0.00:0:0.00:0.00:0.00:118:14:0:0.00:0:0.00:0
11	94180033	gridss191_38o	T	T[11:94180130[	125.22	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.61;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-162;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-19,20;CQ=125.22;EVENT=gridss191_38;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_38h;RAS=0;RASQ=0.00;REF=359;REFPAIR=26;RP=3;RPQ=62.61;SC=151M17D100M1X38N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.61:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.22:0.00:359:26:3:62.61:0:0.00:3
11	94180130	gridss191_38h	C	]11:94180033]C	125.22	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-162;BEIDH=0;BEIDL=2;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-19,20;CQ=125.22;EVENT=gridss191_38;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_38o;RAS=1;RASQ=62.61;REF=282;REFPAIR=16;RP=3;RPQ=62.61;SB=0.0;SC=1X38N1X174M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:125.22:62.61:282:16:3:62.61:0:0.00:3
11	94193707	gridss191_47o	T	T[11:94193910[	61.26	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-572;BEIDH=95;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,25;CIRPOS=0,25;CQ=81.56;EVENT=gridss191_47;HOMLEN=25;HOMSEQ=TAACATTAATTAAACACTAATTTTC;IC=0;IHOMPOS=0,56;IQ=0.00;PARID=gridss191_47h;RAS=1;RASQ=61.26;REF=108;REFPAIR=8;RP=0;RPQ=0.00;SC=94M1X24N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:61.26:61.26:108:8:0:0.00:0:0.00:3
11	94193910	gridss191_47h	T	]11:94193707]T	61.26	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=61.26;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-572;BEIDH=0;BEIDL=95;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,25;CIRPOS=0,25;CQ=81.56;EVENT=gridss191_47;HOMLEN=25;HOMSEQ=TAACATTAATTAAACACTAATTTTC;IC=0;IHOMPOS=0,56;IQ=0.00;PARID=gridss191_47o;RAS=0;RASQ=0.00;REF=233;REFPAIR=15;RP=0;RPQ=0.00;SC=1X24N1X158M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:61.26:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:61.26:0.00:233:15:0:0.00:0:0.00:3
11	94198562	gridss191_618b	T	.GAAAAATATGTGATTCCCTTAAAAAAAATATTTTTGTTTTTCCCAACACATCTTTTTTTTTTT	960.20	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=221.40;BASRP=0;BASSR=8;BEID=asm191-587;BEIDH=-1;BEIDL=62;BQ=960.20;BSC=27;BSCQ=738.80;BUM=0;BUMQ=0.00;BVF=27;CAS=0;CASQ=0.00;CQ=579.45;EVENT=gridss191_618;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=94;REFPAIR=28;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:221.40:0:8:960.20:27:738.80:0:0.00:27:0.00:0:0.00:0.00:0.00:94:28:0:0.00:0:0.00:0
11	94198581	gridss191_292b	T	TTTTGAGATGGC.	157.21	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=59.00;BASRP=0;BASSR=3;BEID=asm191-214;BEIDH=-1;BEIDL=0;BQ=157.21;BSC=5;BSCQ=98.21;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=138.53;EVENT=gridss191_292;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=67;REFPAIR=6;RP=0;RPQ=0.00;SB=0.75;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:59.00:0:3:157.21:5:98.21:0:0.00:5:0.00:0:0.00:0.00:0.00:67:6:0:0.00:0:0.00:0
11	94203765	gridss191_59o	G	G[11:94203889[	146.58	LOW_QUAL	AS=1;ASQ=62.58;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-254,asm191-649;BEIDH=2,211;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-48,49;CIRPOS=-48,49;CQ=146.58;EVENT=gridss191_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_59h;RAS=1;RASQ=0.00;REF=283;REFPAIR=18;RP=4;RPQ=83.99;SC=210M1X96N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.58:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.58:0.00:283:18:4:83.99:0:0.00:4
11	94203889	gridss191_59h	T	]11:94203765]T	146.58	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-254,asm191-649;BEIDH=0,0;BEIDL=2,211;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-48,49;CIRPOS=-48,49;CQ=146.58;EVENT=gridss191_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_59o;RAS=1;RASQ=62.58;REF=140;REFPAIR=9;RP=4;RPQ=83.99;SC=1X96N1X210M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.58:62.58:140:9:4:83.99:0:0.00:4
11	94212774	gridss191_74o	T	T[11:94212872[	168.49	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.25;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-293;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-1,1;CQ=168.49;EVENT=gridss191_74;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_74h;RAS=0;RASQ=0.00;REF=284;REFPAIR=11;RP=4;RPQ=84.25;SC=305M1X1N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.25:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:168.49:0.00:284:11:4:84.25:0:0.00:4
11	94212872	gridss191_74h	T	]11:94212774]T	168.49	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-293;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-1,1;CQ=168.49;EVENT=gridss191_74;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_74o;RAS=1;RASQ=84.25;REF=331;REFPAIR=21;RP=4;RPQ=84.25;SC=1X1N1X247M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:168.49:84.25:331:21:4:84.25:0:0.00:4
11	94213128	gridss191_76o	T	T[11:94213219[	189.04	LOW_QUAL	AS=1;ASQ=83.82;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-291,asm191-686;BEIDH=2,180;BEIDL=0,0;BQ=19.56;BSC=1;BSCQ=19.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-14,15;CIRPOS=-15,15;CQ=189.04;EVENT=gridss191_76;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_76h;RAS=1;RASQ=0.00;REF=140;REFPAIR=5;RP=5;RPQ=105.23;SB=0.0;SC=278M1X28N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.82:4:0:0:0.00:0:0.00:0.00:0:0:19.56:1:19.56:0:0.00:1:0.00:0:0.00:189.04:0.00:140:5:5:105.23:0:0.00:5
11	94213219	gridss191_76h	T	]11:94213128]T	189.04	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-291,asm191-686;BEIDH=0,0;BEIDL=2,180;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-15,15;CIRPOS=-14,15;CQ=189.04;EVENT=gridss191_76;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_76o;RAS=1;RASQ=83.82;REF=134;REFPAIR=9;RP=5;RPQ=105.23;SC=1X29N1X158M18D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:189.04:83.82:134:9:5:105.23:0:0.00:5
11	94226423	gridss191_91o	C	C[11:94226492[	145.96	LOW_QUAL	AS=1;ASQ=62.32;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-345,asm191-745;BEIDH=2,154;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-8,9;CQ=145.96;EVENT=gridss191_91;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_91h;RAS=1;RASQ=0.00;REF=428;REFPAIR=31;RP=4;RPQ=83.64;SC=101M50D153M1X2N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.32:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:145.96:0.00:428:31:4:83.64:0:0.00:4
11	94226492	gridss191_91h	A	]11:94226423]A	145.96	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-345,asm191-745;BEIDH=0,0;BEIDL=2,154;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-1,2;CQ=145.96;EVENT=gridss191_91;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_91o;RAS=1;RASQ=62.32;REF=344;REFPAIR=18;RP=4;RPQ=83.64;SC=1X16N1X290M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:145.96:62.32:344:18:4:83.64:0:0.00:4
11	94226935	gridss191_92o	A	A[11:94227015[	247.88	LOW_QUAL	AS=1;ASQ=103.34;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-344,asm191-747;BEIDH=2,164;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=247.88;EVENT=gridss191_92;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_92h;RAS=1;RASQ=0.00;REF=319;REFPAIR=29;RP=7;RPQ=144.54;SC=101M1D195M1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:103.34:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:247.88:0.00:319:29:7:144.54:0:0.00:7
11	94227015	gridss191_92h	C	]11:94226935]C	247.88	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-344,asm191-747;BEIDH=0,0;BEIDL=2,164;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=247.88;EVENT=gridss191_92;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_92o;RAS=1;RASQ=103.34;REF=334;REFPAIR=22;RP=7;RPQ=144.54;SB=0.0;SC=1X9N1X227M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:247.88:103.34:334:22:7:144.54:0:0.00:7
11	108093026	gridss192_3o	C	C[11:108093112[	63.30	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=41.24;BSC=2;BSCQ=41.24;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-50,51;CIRPOS=-2,3;CQ=63.30;EVENT=gridss192_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_3h;RAS=0;RASQ=0.00;REF=344;REFPAIR=23;RP=3;RPQ=63.30;SB=0.0;SC=206M1X100N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:41.24:2:41.24:0:0.00:2:0.00:0:0.00:63.30:0.00:344:23:3:63.30:0:0.00:3
11	108093112	gridss192_3h	A	]11:108093026]A	63.30	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-50,51;CQ=63.30;EVENT=gridss192_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_3o;RAS=0;RASQ=0.00;REF=366;REFPAIR=18;RP=3;RPQ=63.30;SB=1.0;SC=1X4N1X100M7D195M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:63.30:0.00:366:18:3:63.30:0:0.00:3
11	108100106	gridss192_1152b	T	.ATAAATAAGTAATTTAATAAATTATAAAAAAATGAAGAAAAAAATTTGTGTTGCGAGAGTT	413.01	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=134.24;BASRP=0;BASSR=5;BEID=asm192-1016;BEIDH=-1;BEIDL=60;BQ=413.01;BSC=11;BSCQ=278.77;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=388.49;EVENT=gridss192_1152;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=73;REFPAIR=17;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:134.24:0:5:413.01:11:278.77:0:0.00:11:0.00:0:0.00:0.00:0.00:73:17:0:0.00:0:0.00:0
11	108100119	gridss192_317b	T	TTTTAGATTTTTTTAAAG.	148.10	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=60.37;BASRP=0;BASSR=3;BEID=asm192-66;BEIDH=-1;BEIDL=0;BQ=148.10;BSC=4;BSCQ=87.73;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=148.10;EVENT=gridss192_317;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=68;REFPAIR=11;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:60.37:0:3:148.10:4:87.73:0:0.00:4:0.00:0:0.00:0.00:0.00:68:11:0:0.00:0:0.00:0
11	108114964	gridss192_25o	A	A[11:108115038[	356.13	LOW_QUAL	AS=1;ASQ=167.58;ASRP=8;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1137,asm192-150;BEIDH=284,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,12;CIRPOS=-6,7;CQ=356.13;EVENT=gridss192_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_25h;RAS=1;RASQ=0.00;REF=288;REFPAIR=22;RP=9;RPQ=188.55;SC=283M1X23N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=9	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:167.58:8:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:356.13:0.00:288:22:9:188.55:0:0.00:9
11	108115038	gridss192_25h	A	]11:108114964]A	356.13	LOW_QUAL	AS=1;ASQ=0.00;ASRP=8;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1137,asm192-150;BEIDH=0,0;BEIDL=284,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-12,12;CQ=356.13;EVENT=gridss192_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_25o;RAS=1;RASQ=167.58;REF=460;REFPAIR=26;RP=9;RPQ=188.55;SC=1X12N1X294M;SR=0;SRQ=0.00;SVTYPE=BND;VF=9	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:8:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:356.13:167.58:460:26:9:188.55:0:0.00:9
11	108115552	gridss192_28o	G	G[11:108115643[	64.03	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-19,20;CQ=64.03;EVENT=gridss192_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_28h;RAS=0;RASQ=0.00;REF=426;REFPAIR=38;RP=3;RPQ=64.03;SB=1.0;SC=82M1D19M5D131M1X69N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:64.03:0.00:426:38:3:64.03:0:0.00:3
11	108115643	gridss192_28h	A	]11:108115552]A	64.03	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-35,35;CQ=64.03;EVENT=gridss192_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_28o;RAS=0;RASQ=0.00;REF=324;REFPAIR=25;RP=3;RPQ=64.03;SC=1X38N1X100M1D167M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.03:0.00:324:25:3:64.03:0:0.00:3
11	108116549	gridss192_1201b	T	.AAAAAAATTTAGTTTTTGTTTTTATTAATTTAAAAAATTTTTTTTAACCTTTTT	1949.39	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=3;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=427.40;BASRP=0;BASSR=17;BEID=asm192-1105,asm192-1106,asm192-1118;BEIDH=-1,-1,-1;BEIDL=53,70,41;BQ=1949.39;BSC=55;BSCQ=1521.99;BUM=0;BUMQ=0.00;BVF=55;CAS=0;CASQ=0.00;CQ=1272.24;EVENT=gridss192_1201;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=101;REFPAIR=59;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:427.40:0:17:1949.39:55:1521.99:0:0.00:55:0.00:0:0.00:0.00:0.00:101:59:0:0.00:0:0.00:0
11	108119902	gridss192_35o	G	G[11:108119994[	63.85	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-27,27;CIRPOS=-59,59;CQ=63.85;EVENT=gridss192_35;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_35h;RAS=0;RASQ=0.00;REF=363;REFPAIR=34;RP=3;RPQ=63.85;SC=101M27D125M1X53N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.85:0.00:363:34:3:63.85:0:0.00:3
11	108119994	gridss192_35h	T	]11:108119902]T	63.85	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-59,59;CIRPOS=-27,27;CQ=63.85;EVENT=gridss192_35;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_35o;RAS=0;RASQ=0.00;REF=388;REFPAIR=30;RP=3;RPQ=63.85;SC=1X117N1X189M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.85:0.00:388:30:3:63.85:0:0.00:3
11	108121411	gridss192_1220b	T	.TAATGTGTAAGTGACAATTATATATATTTCCTTTTTAATTTTTTATGTGATGTGATATTTTTCTAATTTTTCTT	580.03	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=164.38;BASRP=0;BASSR=7;BEID=asm192-1154;BEIDH=-1;BEIDL=73;BQ=580.03;BSC=17;BSCQ=415.64;BUM=0;BUMQ=0.00;BVF=17;CAS=0;CASQ=0.00;CQ=502.28;EVENT=gridss192_1220;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=206;REFPAIR=41;RP=0;RPQ=0.00;SB=0.06666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:164.38:0:7:580.03:17:415.64:0:0.00:17:0.00:0:0.00:0.00:0.00:206:41:0:0.00:0:0.00:0
11	108121472	gridss192_39o	T	T[11:108121555[	64.13	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=81.79;BSC=4;BSCQ=81.79;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-17,18;CIRPOS=-19,19;CQ=64.13;EVENT=gridss192_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_39h;RAS=0;RASQ=0.00;REF=334;REFPAIR=28;RP=3;RPQ=64.13;SB=1.0;SC=128M45D99M1X34N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:81.79:4:81.79:0:0.00:4:0.00:0:0.00:64.13:0.00:334:28:3:64.13:0:0.00:3
11	108121555	gridss192_39h	G	]11:108121472]G	64.13	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.17;BSC=1;BSCQ=19.17;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-19,19;CIRPOS=-17,18;CQ=64.13;EVENT=gridss192_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_39o;RAS=0;RASQ=0.00;REF=343;REFPAIR=21;RP=3;RPQ=64.13;SB=0.0;SC=1X37N1X147M21D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.17:1:19.17:0:0.00:1:0.00:0:0.00:64.13:0.00:343:21:3:64.13:0:0.00:3
11	108122662	gridss192_41o	G	G[11:108122732[	63.53	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=25.95;BSC=1;BSCQ=25.95;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-8,9;CQ=63.53;EVENT=gridss192_41;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_41h;RAS=0;RASQ=0.00;REF=413;REFPAIR=32;RP=3;RPQ=63.53;SB=0.0;SC=201M1X69N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:25.95:1:25.95:0:0.00:1:0.00:0:0.00:63.53:0.00:413:32:3:63.53:0:0.00:3
11	108122732	gridss192_41h	C	]11:108122662]C	63.53	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=27.54;BSC=1;BSCQ=27.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-35,35;CQ=63.53;EVENT=gridss192_41;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_41o;RAS=0;RASQ=0.00;REF=486;REFPAIR=41;RP=3;RPQ=63.53;SB=1.0;SC=1X16N1X100M48D142M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:27.54:1:27.54:0:0.00:1:0.00:0:0.00:63.53:0.00:486:41:3:63.53:0:0.00:3
11	108130758	gridss192_1280b	T	.TTTGTTATTTTTAATTTTTTTTTTGTTTATGGAAGTTTTTTTGT	1456.51	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=126.70;BASRP=0;BASSR=5;BEID=asm192-1214,asm192-1215;BEIDH=-1,-1;BEIDL=43,67;BQ=1456.51;BSC=50;BSCQ=1329.81;BUM=0;BUMQ=0.00;BVF=50;CAS=0;CASQ=0.00;CQ=954.87;EVENT=gridss192_1280;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=111;REFPAIR=53;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:126.70:0:5:1456.51:50:1329.81:0:0.00:50:0.00:0:0.00:0.00:0.00:111:53:0:0.00:0:0.00:0
11	108142155	gridss192_61o	G	G[11:108142309[	63.65	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=20.35;BSC=1;BSCQ=20.35;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-33,33;CQ=63.65;EVENT=gridss192_61;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_61h;RAS=0;RASQ=0.00;REF=557;REFPAIR=50;RP=3;RPQ=63.65;SB=1.0;SC=101M97D108M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.35:1:20.35:0:0.00:1:0.00:0:0.00:63.65:0.00:557:50:3:63.65:0:0.00:3
11	108142309	gridss192_61h	T	]11:108142155]T	63.65	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=2;BANRPQ=42.24;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=71.65;BSC=3;BSCQ=71.65;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-33,33;CIRPOS=0,1;CQ=63.65;EVENT=gridss192_61;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_61o;RAS=0;RASQ=0.00;REF=520;REFPAIR=46;RP=3;RPQ=63.65;SB=0.6666667;SC=1X65N1X241M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:2:42.24:0:0.00:0.00:0:0:71.65:3:71.65:0:0.00:3:0.00:0:0.00:63.65:0.00:520:46:3:63.65:0:0.00:3
11	108143315	gridss192_64o	G	G[11:108143431[	62.80	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=98.53;BSC=5;BSCQ=98.53;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-58,58;CIRPOS=-45,45;CQ=62.80;EVENT=gridss192_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_64h;RAS=0;RASQ=0.00;REF=288;REFPAIR=21;RP=3;RPQ=62.80;SB=0.4;SC=191M1X115N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:98.53:5:98.53:0:0.00:5:0.00:0:0.00:62.80:0.00:288:21:3:62.80:0:0.00:3
11	108143431	gridss192_64h	A	]11:108143315]A	62.80	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-45,45;CIRPOS=-58,58;CQ=62.80;EVENT=gridss192_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_64o;RAS=0;RASQ=0.00;REF=283;REFPAIR=22;RP=3;RPQ=62.80;SC=1X89N1X115M1D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.80:0.00:283:22:3:62.80:0:0.00:3
11	108156410	gridss192_89o	G	G[11:108156559[	63	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=346.45;BSC=14;BSCQ=346.45;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CIPOS=-61,62;CIRPOS=-39,39;CQ=63.00;EVENT=gridss192_89;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_89h;RAS=0;RASQ=0.00;REF=222;REFPAIR=18;RP=3;RPQ=63.00;SB=1.0;SC=184M1X122N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:346.45:14:346.45:0:0.00:14:0.00:0:0.00:63.00:0.00:222:18:3:63.00:0:0.00:3
11	108156559	gridss192_89h	C	]11:108156410]C	63	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-61,62;CQ=63.00;EVENT=gridss192_89;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_89o;RAS=0;RASQ=0.00;REF=332;REFPAIR=15;RP=3;RPQ=63.00;SC=1X77N1X100M28D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.00:0.00:332:15:3:63.00:0:0.00:3
11	108159229	gridss192_1408b	T	.CATTAGAGTTGTTTTCTTGGTTTTATTGTAAGCTTCTTTAAAATATTCTTTTTTTT	941.20	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=306.00;BASRP=0;BASSR=17;BEID=asm192-1362;BEIDH=-1;BEIDL=55;BQ=941.20;BSC=25;BSCQ=635.20;BUM=0;BUMQ=0.00;BVF=25;CAS=0;CASQ=0.00;CQ=894.07;EVENT=gridss192_1408;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=108;REFPAIR=30;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:306.00:0:17:941.20:25:635.20:0:0.00:25:0.00:0:0.00:0.00:0.00:108:30:0:0.00:0:0.00:0
11	108159246	gridss192_601b	T	TTTAAGGTGCCCCAATGTTCTGGGCAATAAAAAAAATAAATATTACTTAGAAAGTAATTTAAAATATGTAATTTC.	755.68	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=250.45;BASRP=0;BASSR=8;BEID=asm192-406;BEIDH=-1;BEIDL=0;BQ=755.68;BSC=16;BSCQ=505.22;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=540.91;EVENT=gridss192_601;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=127;REFPAIR=19;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:250.45:0:8:755.68:16:505.22:0:0.00:16:0.00:0:0.00:0.00:0.00:127:19:0:0.00:0:0.00:0
11	108163537	gridss192_101o	T	T[11:108163640[	211.37	LOW_QUAL	AS=1;ASQ=105.68;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1430,asm192-461;BEIDH=231,2;BEIDL=0,0;BQ=19.17;BSC=1;BSCQ=19.17;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-38,39;CIRPOS=-32,33;CQ=211.37;EVENT=gridss192_101;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_101h;RAS=1;RASQ=0.00;REF=126;REFPAIR=5;RP=5;RPQ=105.68;SB=1.0;SC=230M1X76N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.68:5:0:0:0.00:0:0.00:0.00:0:0:19.17:1:19.17:0:0.00:1:0.00:0:0.00:211.37:0.00:126:5:5:105.68:0:0.00:5
11	108163640	gridss192_101h	A	]11:108163537]A	211.37	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1430,asm192-461;BEIDH=0,0;BEIDL=231,2;BQ=20.53;BSC=1;BSCQ=20.53;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-38,39;CQ=211.37;EVENT=gridss192_101;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_101o;RAS=1;RASQ=105.68;REF=89;REFPAIR=6;RP=5;RPQ=105.68;SB=1.0;SC=1X64N1X242M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:20.53:1:20.53:0:0.00:1:0.00:0:0.00:211.37:105.68:89:6:5:105.68:0:0.00:5
11	108172777	gridss192_119o	T	T[11:108172850[	189.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=104.79;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-537;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-1,1;CQ=189.17;EVENT=gridss192_119;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_119h;RAS=0;RASQ=0.00;REF=370;REFPAIR=27;RP=4;RPQ=84.37;SC=166M39D100M1X1N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.79:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:189.17:0.00:370:27:4:84.37:0:0.00:5
11	108172850	gridss192_119h	T	]11:108172777]T	189.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=3;BANRPQ=64.07;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-537;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-1,1;CQ=189.17;EVENT=gridss192_119;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_119o;RAS=1;RASQ=104.79;REF=518;REFPAIR=35;RP=4;RPQ=84.37;SC=1X1N1X368M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:3:64.07:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:189.17:104.79:518:35:4:84.37:0:0.00:5
11	108174651	gridss192_131o	A	A[11:108174720[	229.96	LOW_QUAL	AS=1;ASQ=104.37;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1485,asm192-536;BEIDH=195,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-5,5;CQ=229.96;EVENT=gridss192_131;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_131h;RAS=1;RASQ=0.00;REF=415;REFPAIR=19;RP=6;RPQ=125.60;SC=290M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.37:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:229.96:0.00:415:19:6:125.60:0:0.00:6
11	108174720	gridss192_131h	T	]11:108174651]T	229.96	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1485,asm192-536;BEIDH=0,0;BEIDL=195,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-8,9;CQ=229.96;EVENT=gridss192_131;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_131o;RAS=1;RASQ=104.37;REF=480;REFPAIR=35;RP=6;RPQ=125.60;SC=1X9N1X100M2D171M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:229.96:104.37:480:35:6:125.60:0:0.00:6
11	108183415	gridss192_764b	T	TGCCACT.	116.83	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=58.42;BASRP=0;BASSR=3;BEID=asm192-595;BEIDH=-1;BEIDL=0;BQ=116.83;BSC=3;BSCQ=58.42;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=116.83;EVENT=gridss192_764;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=21;REFPAIR=0;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:58.42:0:3:116.83:3:58.42:0:0.00:3:0.00:0:0.00:0.00:0.00:21:0:0:0.00:0:0.00:0
11	108186999	gridss192_154o	G	G[11:108187036[	146.46	LOW_QUAL	AS=1;ASQ=62.97;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1590,asm192-615;BEIDH=183,2;BEIDL=0,0;BQ=64.80;BSC=3;BSCQ=64.80;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-2,3;CQ=146.46;EVENT=gridss192_154;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_154h;RAS=1;RASQ=0.00;REF=205;REFPAIR=18;RP=4;RPQ=83.49;SB=0.33333334;SC=261M1X45N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.97:3:0:0:0.00:0:0.00:0.00:0:0:64.80:3:64.80:0:0.00:3:0.00:0:0.00:146.46:0.00:205:18:4:83.49:0:0.00:4
11	108187036	gridss192_154h	G	]11:108186999]G	146.46	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1590,asm192-615;BEIDH=0,0;BEIDL=183,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-23,23;CQ=146.46;EVENT=gridss192_154;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_154o;RAS=1;RASQ=62.97;REF=184;REFPAIR=16;RP=4;RPQ=83.49;SC=1X4N1X100M19D181M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.46:62.97:184:16:4:83.49:0:0.00:4
11	108195977	gridss192_1603b	T	.CTTTGTATTATTATATTTTTTTCTCTTAAGTTTGGGAAATTAATTATT	342.18	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=25.54;BASRP=0;BASSR=1;BEID=asm192-1612;BEIDH=-1;BEIDL=47;BQ=342.18;BSC=13;BSCQ=316.64;BUM=0;BUMQ=0.00;BVF=13;CAS=0;CASQ=0.00;CQ=202.20;EVENT=gridss192_1603;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=80;REFPAIR=19;RP=0;RPQ=0.00;SB=0.0625;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:25.54:0:1:342.18:13:316.64:0:0.00:13:0.00:0:0.00:0.00:0.00:80:19:0:0.00:0:0.00:0
11	108201183	gridss192_187o	C	C[11:108201292[	210.50	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=105.25;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-735;BEIDH=2;BEIDL=0;BQ=39.51;BSC=2;BSCQ=39.51;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-72,73;CIRPOS=-7,8;CQ=210.50;EVENT=gridss192_187;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_187h;RAS=0;RASQ=0.00;REF=115;REFPAIR=9;RP=5;RPQ=105.25;SB=0.0;SC=162M1X144N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.25:5:0:0:0.00:0:0.00:0.00:0:0:39.51:2:39.51:0:0.00:2:0.00:0:0.00:210.50:0.00:115:9:5:105.25:0:0.00:6
11	108201292	gridss192_187h	T	]11:108201183]T	210.50	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=3;BANRPQ=63.19;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-735;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-72,73;CQ=210.50;EVENT=gridss192_187;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_187o;RAS=1;RASQ=105.25;REF=127;REFPAIR=10;RP=5;RPQ=105.25;SC=1X14N1X157M34D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:3:63.19:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:210.50:105.25:127:10:5:105.25:0:0.00:6
11	108201885	gridss192_189o	T	T[11:108202039[	275.35	LOW_QUAL	AS=1;ASQ=147.68;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1694,asm192-739;BEIDH=197,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-1,1;CQ=275.35;EVENT=gridss192_189;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_189h;RAS=1;RASQ=0.00;REF=402;REFPAIR=29;RP=6;RPQ=127.68;SC=101M8D196M1X1N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:147.68:7:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:275.35:0.00:402:29:6:127.68:0:0.00:7
11	108202039	gridss192_189h	A	]11:108201885]A	275.35	LOW_QUAL	AS=1;ASQ=0.00;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1694,asm192-739;BEIDH=0,0;BEIDL=197,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-1,1;CQ=275.35;EVENT=gridss192_189;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_189o;RAS=1;RASQ=147.68;REF=244;REFPAIR=24;RP=6;RPQ=127.68;SC=1X1N1X288M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:7:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:275.35:147.68:244:24:6:127.68:0:0.00:7
11	108202613	gridss192_194o	C	C[11:108202666[	84.37	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-31,32;CIRPOS=-2,3;CQ=84.37;EVENT=gridss192_194;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_194h;RAS=0;RASQ=0.00;REF=281;REFPAIR=19;RP=4;RPQ=84.37;SC=112M32D100M1X62N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.37:0.00:281:19:4:84.37:0:0.00:4
11	108202666	gridss192_194h	G	]11:108202613]G	84.37	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-31,32;CQ=84.37;EVENT=gridss192_194;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_194o;RAS=0;RASQ=0.00;REF=328;REFPAIR=34;RP=4;RPQ=84.37;SC=1X4N1X173M28D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.37:0.00:328:34:4:84.37:0:0.00:4
11	108203399	gridss192_195o	A	A[11:108203538[	144.41	LOW_QUAL	AS=1;ASQ=61.50;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1693,asm192-784;BEIDH=192,2;BEIDL=0,0;BQ=25.13;BSC=1;BSCQ=25.13;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-58,58;CIRPOS=-1,1;CQ=144.41;EVENT=gridss192_195;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_195h;RAS=1;RASQ=0.00;REF=239;REFPAIR=12;RP=4;RPQ=82.91;SB=0.0;SC=191M1X115N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:61.50:3:0:0:0.00:0:0.00:0.00:0:0:25.13:1:25.13:0:0.00:1:0.00:0:0.00:144.41:0.00:239:12:4:82.91:0:0.00:4
11	108203538	gridss192_195h	G	]11:108203399]G	144.41	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1693,asm192-784;BEIDH=0,0;BEIDL=192,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-58,58;CQ=144.41;EVENT=gridss192_195;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_195o;RAS=1;RASQ=61.50;REF=359;REFPAIR=20;RP=4;RPQ=82.91;SC=1X1N1X121M83D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:144.41:61.50:359:20:4:82.91:0:0.00:4
11	108205649	gridss192_204o	A	A[11:108205732[	250.64	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=124.91;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-777;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-8,8;CQ=250.64;EVENT=gridss192_204;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_204h;RAS=0;RASQ=0.00;REF=238;REFPAIR=29;RP=6;RPQ=125.73;SC=291M1X15N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:124.91:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:250.64:0.00:238:29:6:125.73:0:0.00:7
11	108205732	gridss192_204h	A	]11:108205649]A	250.64	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=6;BANRPQ=125.73;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-777;BEIDH=0;BEIDL=2;BQ=47.23;BSC=2;BSCQ=47.23;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-8,8;CQ=250.64;EVENT=gridss192_204;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_204o;RAS=1;RASQ=124.91;REF=400;REFPAIR=34;RP=6;RPQ=125.73;SB=1.0;SC=1X15N1X293M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:6:125.73:0:0.00:0.00:0:0:47.23:2:47.23:0:0.00:2:0.00:0:0.00:250.64:124.91:400:34:6:125.73:0:0.00:7
11	108234963	gridss192_238o	T	T[11:108235068[	146.93	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.76;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-946;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-4,4;CQ=146.93;EVENT=gridss192_238;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_238h;RAS=0;RASQ=0.00;REF=403;REFPAIR=21;RP=4;RPQ=84.17;SC=266M1X40N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.76:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.93:0.00:403:21:4:84.17:0:0.00:4
11	108235068	gridss192_238h	A	]11:108234963]A	146.93	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.81;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-946;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-20,21;CQ=146.93;EVENT=gridss192_238;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_238o;RAS=1;RASQ=62.76;REF=274;REFPAIR=26;RP=4;RPQ=84.17;SC=1X7N1X196M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.81:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.93:62.76:274:26:4:84.17:0:0.00:4
11	108236775	gridss192_1046b	A	AGAAAATTATTTGAAATTTAACTAGAAAAAATTC.	169.36	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=63.10;BASRP=0;BASSR=3;BEID=asm192-921;BEIDH=-1;BEIDL=0;BQ=169.36;BSC=5;BSCQ=106.26;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=106.90;EVENT=gridss192_1046;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=45;REFPAIR=7;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:63.10:0:3:169.36:5:106.26:0:0.00:5:0.00:0:0.00:0.00:0.00:45:7:0:0.00:0:0.00:0
11	113669387	gridss193_4o	C	C[11:113669450[	191.28	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=85.05;ASRP=4;ASSR=0;BA=0;BANRP=2;BANRPQ=42.47;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm193-23;BEIDH=2;BEIDL=0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-33,34;CQ=191.27;EVENT=gridss193_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss193_4h;RAS=0;RASQ=0.00;REF=352;REFPAIR=30;RP=5;RPQ=106.23;SB=1.0;SC=160M2D46M1X47N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:85.05:4:0:2:42.47:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:191.28:0.00:352:30:5:106.23:0:0.00:6
11	113669450	gridss193_4h	A	]11:113669387]A	191.28	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=2;BANRPQ=42.52;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm193-23;BEIDH=0;BEIDL=2;BQ=27.36;BSC=1;BSCQ=27.36;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-33,34;CIRPOS=-24,24;CQ=191.27;EVENT=gridss193_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss193_4o;RAS=1;RASQ=85.05;REF=310;REFPAIR=16;RP=5;RPQ=106.23;SB=1.0;SC=1X66N1X314M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:2:42.52:0:0.00:0.00:0:0:27.36:1:27.36:0:0.00:1:0.00:0:0.00:191.28:85.05:310:16:5:106.23:0:0.00:6
11	113669561	gridss193_7o	T	T[11:113669615[	127.34	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.91;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm193-24;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-13,13;CQ=169.82;EVENT=gridss193_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss193_7h;RAS=0;RASQ=0.00;REF=234;REFPAIR=15;RP=2;RPQ=42.44;SC=101M23D100M1X25N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.91:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.34:0.00:234:15:2:42.44:0:0.00:4
11	113669615	gridss193_7h	T	]11:113669561]T	127.34	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm193-24;BEIDH=0;BEIDL=2;BQ=20.35;BSC=1;BSCQ=20.35;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-13,13;CQ=169.82;EVENT=gridss193_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss193_7o;RAS=1;RASQ=84.91;REF=280;REFPAIR=21;RP=2;RPQ=42.44;SB=0.0;SC=1X25N1X274M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:20.35:1:20.35:0:0.00:1:0.00:0:0.00:127.34:84.91:280:21:2:42.44:0:0.00:4
11	113678954	gridss193_14o	G	G[11:113679108[	125.45	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.72;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm193-49;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-7,7;CQ=125.45;EVENT=gridss193_14;IC=0;IMPRECISE;IQ=0.00;PARID=gridss193_14h;RAS=0;RASQ=0.00;REF=96;REFPAIR=6;RP=3;RPQ=62.72;SC=96M72D125M1X13N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.72:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.45:0.00:96:6:3:62.72:0:0.00:3
11	113679108	gridss193_14h	G	]11:113678954]G	125.45	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm193-49;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-7,7;CQ=125.45;EVENT=gridss193_14;IC=0;IMPRECISE;IQ=0.00;PARID=gridss193_14o;RAS=1;RASQ=62.72;REF=206;REFPAIR=10;RP=3;RPQ=62.72;SC=1X13N1X170M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.45:62.72:206:10:3:62.72:0:0.00:3
11	125495210	gridss194_48b	C	CCCTCAAGC.	189.32	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=94.66;BASRP=0;BASSR=5;BEID=asm194-3;BEIDH=-1;BEIDL=0;BQ=189.32;BSC=5;BSCQ=94.66;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=189.32;EVENT=gridss194_48;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=338;REFPAIR=39;RP=0;RPQ=0.00;SB=0.8;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:94.66:0:5:189.32:5:94.66:0:0.00:5:0.00:0:0.00:0.00:0.00:338:39:0:0.00:0:0.00:0
11	125495212	gridss194_171b	T	.CCTGACCCT	249.77	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=114.77;BASRP=0;BASSR=6;BEID=asm194-141;BEIDH=-1;BEIDL=8;BQ=249.77;BSC=7;BSCQ=135.00;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=229.54;EVENT=gridss194_171;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=339;REFPAIR=38;RP=0;RPQ=0.00;SB=0.61538464;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:114.77:0:6:249.77:7:135.00:0:0.00:7:0.00:0:0.00:0.00:0.00:339:38:0:0.00:0:0.00:0
11	125496642	gridss194_8o	A	A[11:125496759[	84.19	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=2;BANRPQ=41.37;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm194-181;BEIDH=177;BEIDL=0;BQ=119.70;BSC=5;BSCQ=119.70;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-65,66;CIRPOS=-11,11;CQ=84.19;EVENT=gridss194_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_8h;RAS=1;RASQ=0.00;REF=673;REFPAIR=45;RP=4;RPQ=84.19;SB=1.0;SC=176M1X130N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:2:41.37:0:0.00:0.00:0:0:119.70:5:119.70:0:0.00:5:0.00:0:0.00:84.19:0.00:673:45:4:84.19:0:0.00:4
11	125496759	gridss194_8h	T	]11:125496642]T	84.19	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm194-181;BEIDH=0;BEIDL=177;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-65,66;CQ=84.19;EVENT=gridss194_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_8o;RAS=0;RASQ=0.00;REF=509;REFPAIR=39;RP=4;RPQ=84.19;SC=1X21N1X285M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.19:0.00:509:39:4:84.19:0:0.00:4
11	125502535	gridss194_93b	T	TCAGGGGTTGGTCC.	217.32	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=64.17;BASRP=0;BASSR=3;BEID=asm194-67;BEIDH=-1;BEIDL=0;BQ=217.32;BSC=6;BSCQ=153.15;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=89.06;EVENT=gridss194_93;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=561;REFPAIR=28;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:64.17:0:3:217.32:6:153.15:0:0.00:6:0.00:0:0.00:0.00:0.00:561:28:0:0.00:0:0.00:0
11	125507176	gridss194_22o	A	A[11:125507299[	402.39	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=211.71;ASRP=10;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm194-87;BEIDH=2;BEIDL=0;BQ=21.90;BSC=1;BSCQ=21.90;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=402.39;EVENT=gridss194_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_22h;RAS=0;RASQ=0.00;REF=283;REFPAIR=35;RP=9;RPQ=190.68;SB=0.0;SC=105M10D186M1X5N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=10	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:211.71:10:0:0:0.00:0:0.00:0.00:0:0:21.90:1:21.90:0:0.00:1:0.00:0:0.00:402.39:0.00:283:35:9:190.68:0:0.00:10
11	125507299	gridss194_22h	C	]11:125507176]C	402.39	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=10;ASSR=0;BA=0;BANRP=7;BANRPQ=147.86;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm194-87;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=402.39;EVENT=gridss194_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_22o;RAS=1;RASQ=211.71;REF=510;REFPAIR=32;RP=9;RPQ=190.68;SC=1X5N1X285M;SR=0;SRQ=0.00;SVTYPE=BND;VF=10	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:10:0:7:147.86:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:402.39:211.71:510:32:9:190.68:0:0.00:10
11	125513862	gridss194_26o	T	T[11:125513993[	148.46	LOW_QUAL	AS=1;ASQ=63.05;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm194-102,asm194-254;BEIDH=10,223;BEIDL=0,0;BQ=26.07;BSC=1;BSCQ=26.07;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-46,47;CIRPOS=-2,2;CQ=148.46;EVENT=gridss194_26;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_26h;RAS=1;RASQ=0.00;REF=216;REFPAIR=9;RP=4;RPQ=85.41;SB=0.0;SC=222M1X92N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.05:3:0:0:0.00:0:0.00:0.00:0:0:26.07:1:26.07:0:0.00:1:0.00:0:0.00:148.46:0.00:216:9:4:85.41:0:0.00:5
11	125513993	gridss194_26h	A	]11:125513862]A	148.46	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm194-102,asm194-254;BEIDH=0,0;BEIDL=10,223;BQ=72.86;BSC=2;BSCQ=72.86;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-46,47;CQ=148.46;EVENT=gridss194_26;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_26o;RAS=1;RASQ=63.05;REF=294;REFPAIR=26;RP=4;RPQ=85.41;SB=1.0;SC=1X3N1X100M3D185M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:72.86:2:72.86:0:0.00:2:0.00:0:0.00:148.46:63.05:294:26:4:85.41:0:0.00:5
11	125524742	gridss194_30o	C	C[11:125524824[	191.02	LOW_QUAL	AS=1;ASQ=84.83;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm194-128,asm194-277;BEIDH=2,187;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-15,15;CQ=191.02;EVENT=gridss194_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_30h;RAS=1;RASQ=0.00;REF=289;REFPAIR=20;RP=5;RPQ=106.19;SC=275M1X31N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.83:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:191.02:0.00:289:20:5:106.19:0:0.00:5
11	125524824	gridss194_30h	A	]11:125524742]A	191.02	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm194-128,asm194-277;BEIDH=0,0;BEIDL=2,187;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,15;CIRPOS=-16,16;CQ=191.02;EVENT=gridss194_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_30o;RAS=1;RASQ=84.83;REF=532;REFPAIR=29;RP=5;RPQ=106.19;SB=0.0;SC=1X29N1X277M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:191.02:84.83:532:29:5:106.19:0:0.00:5
11	125525589	gridss194_283b	T	.CATATTTCT	266.92	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=133.46;BASRP=0;BASSR=7;BEID=asm194-265;BEIDH=-1;BEIDL=8;BQ=266.92;BSC=7;BSCQ=133.46;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=266.92;EVENT=gridss194_283;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=286;REFPAIR=42;RP=0;RPQ=0.00;SB=0.42857143;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:133.46:0:7:266.92:7:133.46:0:0.00:7:0.00:0:0.00:0.00:0.00:286:42:0:0.00:0:0.00:0
11	125525590	gridss194_149b	T	TTCTTCCATGTTGC.	424.08	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=212.04;BASRP=0;BASSR=11;BEID=asm194-114;BEIDH=-1;BEIDL=0;BQ=424.08;BSC=11;BSCQ=212.04;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=424.08;EVENT=gridss194_149;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=277;REFPAIR=47;RP=0;RPQ=0.00;SB=0.45454547;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:212.04:0:11:424.08:11:212.04:0:0.00:11:0.00:0:0.00:0.00:0.00:277:47:0:0.00:0:0.00:0
12	4418785	gridss195_2o	G	]12:4418812]GCTCTATGCTCTGCTCTGGAATGCCCCCG	1000.69	PASS	AS=1;ASQ=552.69;ASRP=0;ASSR=37;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm195-23,asm195-69;BEIDH=0,0;BEIDL=121,64;BQ=1026.97;BSC=44;BSCQ=1026.97;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=1000.69;EVENT=gridss195_2;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss195_2h;RAS=1;RASQ=418.02;REF=141;REFPAIR=9;RP=0;RPQ=0.00;SB=0.5086207;SC=1X95M;SR=1;SRQ=29.97;SVTYPE=BND;VF=34	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:552.69:0:37:0:0.00:0:0.00:0.00:0:0:1026.97:44:1026.97:0:0.00:12:0.00:0:0.00:1000.69:418.02:141:9:0:0.00:1:29.97:34
12	4418812	gridss195_2h	C	CGCTCTATGCTCTGCTCTGGAATGCCCCC[12:4418785[	977.74	PASS	AS=1;ASQ=395.08;ASRP=0;ASSR=36;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm195-23,asm195-69;BEIDH=121,64;BEIDL=0,0;BQ=770.74;BSC=32;BSCQ=770.74;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=1000.69;EVENT=gridss195_2;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss195_2o;RAS=1;RASQ=552.69;REF=174;REFPAIR=11;RP=0;RPQ=0.00;SB=0.5480769;SC=92M1X;SR=1;SRQ=29.97;SVTYPE=BND;VF=33	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:395.08:0:36:0:0.00:0:0.00:0.00:0:0:770.74:32:770.74:0:0.00:8:0.00:0:0.00:977.74:552.69:174:11:0:0.00:1:29.97:33
12	6707343	gridss196_16o	C	C[12:6707538[	127.41	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.71;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm196-161;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-9,9;CQ=106.33;EVENT=gridss196_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss196_16h;RAS=0;RASQ=0.00;REF=186;REFPAIR=11;RP=3;RPQ=63.71;SC=101M15D173M1X17N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.71:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.41:0.00:186:11:3:63.71:0:0.00:3
12	6707538	gridss196_16h	C	]12:6707343]C	127.41	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm196-161;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-9,9;CQ=106.33;EVENT=gridss196_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss196_16o;RAS=1;RASQ=63.71;REF=325;REFPAIR=20;RP=3;RPQ=63.71;SC=1X17N1X157M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.41:63.71:325:20:3:63.71:0:0.00:3
12	21629994	gridss197_131b	C	.GTCTACCTACAACC	121.86	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=60.93;BASRP=0;BASSR=3;BEID=asm197-126;BEIDH=-1;BEIDL=13;BQ=121.86;BSC=3;BSCQ=60.93;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=121.86;EVENT=gridss197_131;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=115;REFPAIR=10;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:60.93:0:3:121.86:3:60.93:0:0.00:3:0.00:0:0.00:0.00:0.00:115:10:0:0.00:0:0.00:0
12	25348488	gridss197_156b	G	.CCGGTGGGAG	346.33	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=173.16;BASRP=0;BASSR=9;BEID=asm197-148;BEIDH=-1;BEIDL=9;BQ=346.33;BSC=9;BSCQ=173.16;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=346.33;EVENT=gridss197_156;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=274;REFPAIR=13;RP=0;RPQ=0.00;SB=0.22222222;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:173.16:0:9:346.33:9:173.16:0:0.00:8:0.00:0:0.00:0.00:0.00:274:13:0:0.00:0:0.00:0
12	25348493	gridss197_87b	G	GGAGGCCTGG.	230.70	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=115.35;BASRP=0;BASSR=6;BEID=asm197-81;BEIDH=-1;BEIDL=0;BQ=230.70;BSC=6;BSCQ=115.35;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=230.70;EVENT=gridss197_87;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=277;REFPAIR=15;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:115.35:0:6:230.70:6:115.35:0:0.00:6:0.00:0:0.00:0.00:0.00:277:15:0:0.00:0:0.00:0
12	133199998	gridss208_3o	G	G[12:133200038[	62.99	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIRPOS=-5,6;CQ=62.99;EVENT=gridss208_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_3h;RAS=0;RASQ=0.00;REF=233;REFPAIR=14;RP=3;RPQ=62.99;SC=101M76D130M1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.99:0.00:233:14:3:62.99:0:0.00:3
12	133200038	gridss208_3h	A	]12:133199998]A	62.99	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=33.28;BSC=1;BSCQ=33.28;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,6;CQ=62.99;EVENT=gridss208_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_3o;RAS=0;RASQ=0.00;REF=208;REFPAIR=16;RP=3;RPQ=62.99;SB=0.0;SC=1X10N1X100M86D110M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:33.28:1:33.28:0:0.00:1:0.00:0:0.00:62.99:0.00:208:16:3:62.99:0:0.00:3
12	133202086	gridss208_11o	C	C[12:133202179[	84.30	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-794;BEIDH=183;BEIDL=0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-2,3;CQ=84.30;EVENT=gridss208_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_11h;RAS=1;RASQ=0.00;REF=361;REFPAIR=33;RP=4;RPQ=84.30;SB=0.0;SC=101M2D182M1X21N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:84.30:0.00:361:33:4:84.30:0:0.00:4
12	133202179	gridss208_11h	A	]12:133202086]A	84.30	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-794;BEIDH=0;BEIDL=183;BQ=38.24;BSC=2;BSCQ=38.24;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-11,11;CQ=84.30;EVENT=gridss208_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_11o;RAS=0;RASQ=0.00;REF=284;REFPAIR=22;RP=4;RPQ=84.30;SB=0.5;SC=1X4N1X302M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:38.24:2:38.24:0:0.00:2:0.00:0:0.00:84.30:0.00:284:22:4:84.30:0:0.00:4
12	133208287	gridss208_187b	G	GAAAAC.	149.40	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=74.70;BASRP=0;BASSR=4;BEID=asm208-67;BEIDH=-1;BEIDL=0;BQ=149.40;BSC=4;BSCQ=74.70;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=149.40;EVENT=gridss208_187;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=162;REFPAIR=17;RP=0;RPQ=0.00;SB=0.25;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:74.70:0:4:149.40:4:74.70:0:0.00:4:0.00:0:0.00:0.00:0.00:162:17:0:0.00:0:0.00:0
12	133210585	gridss208_21o	C	C[12:133210708[	125.82	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.91;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-109;BEIDH=2;BEIDL=0;BQ=27.54;BSC=1;BSCQ=27.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-46,46;CIRPOS=-46,46;CQ=125.82;EVENT=gridss208_21;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_21h;RAS=0;RASQ=0.00;REF=209;REFPAIR=16;RP=3;RPQ=62.91;SB=0.0;SC=101M3D111M1X91N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.91:3:0:0:0.00:0:0.00:0.00:0:0:27.54:1:27.54:0:0.00:1:0.00:0:0.00:125.82:0.00:209:16:3:62.91:0:0.00:3
12	133210708	gridss208_21h	A	]12:133210585]A	125.82	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-109;BEIDH=0;BEIDL=2;BQ=44.30;BSC=2;BSCQ=44.30;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-46,46;CIRPOS=-46,46;CQ=125.82;EVENT=gridss208_21;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_21o;RAS=1;RASQ=62.91;REF=237;REFPAIR=21;RP=3;RPQ=62.91;SB=0.0;SC=1X91N1X138M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.41:0:0.00:0.00:0:0:44.30:2:44.30:0:0.00:2:0.00:0:0.00:125.82:62.91:237:21:3:62.91:0:0.00:3
12	133214124	gridss208_29o	G	G[12:133214217[	148.99	LOW_QUAL	AS=1;ASQ=63.85;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-163,asm208-911;BEIDH=2,167;BEIDL=0,0;BQ=22.26;BSC=1;BSCQ=22.26;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-27,28;CQ=148.99;EVENT=gridss208_29;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_29h;RAS=1;RASQ=0.00;REF=310;REFPAIR=29;RP=4;RPQ=85.14;SB=1.0;SC=167M25D100M1X14N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.85:3:0:0:0.00:0:0.00:0.00:0:0:22.26:1:22.26:0:0.00:1:0.00:0:0.00:148.99:0.00:310:29:4:85.14:0:0.00:4
12	133214217	gridss208_29h	A	]12:133214124]A	148.99	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-163,asm208-911;BEIDH=0,0;BEIDL=2,167;BQ=19.56;BSC=1;BSCQ=19.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-27,28;CIRPOS=-7,8;CQ=148.99;EVENT=gridss208_29;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_29o;RAS=1;RASQ=63.85;REF=444;REFPAIR=27;RP=4;RPQ=85.14;SB=0.0;SC=1X54N1X131M20D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:19.56:1:19.56:0:0.00:1:0.00:0:0.00:148.99:63.85:444:27:4:85.14:0:0.00:4
12	133224047	gridss208_428b	A	AATGGTTTTATGCTTTTTTTTCCTATTATTTTAAGTATAAAATTTTATTCTATCTT.	179.96	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=66.30;BASRP=0;BASSR=3;BEID=asm208-355;BEIDH=-1;BEIDL=0;BQ=179.96;BSC=5;BSCQ=113.66;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=151.28;EVENT=gridss208_428;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=104;REFPAIR=10;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:66.30:0:3:179.96:5:113.66:0:0.00:5:0.00:0:0.00:0.00:0.00:104:10:0:0.00:0:0.00:0
12	133224178	gridss208_52o	G	G[12:133224413[	128.47	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=64.23;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-393;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-34,34;CQ=128.47;EVENT=gridss208_52;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_52h;RAS=0;RASQ=0.00;REF=387;REFPAIR=27;RP=3;RPQ=64.23;SC=138M4D100M1X67N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.23:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:128.47:0.00:387:27:3:64.23:0:0.00:3
12	133224413	gridss208_52h	C	]12:133224178]C	128.47	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-393;BEIDH=0;BEIDL=2;BQ=24.53;BSC=1;BSCQ=24.53;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-34,34;CQ=128.47;EVENT=gridss208_52;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_52o;RAS=1;RASQ=64.23;REF=121;REFPAIR=8;RP=3;RPQ=64.23;SB=1.0;SC=1X67N1X138M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.82:0:0.00:0.00:0:0:24.53:1:24.53:0:0.00:1:0.00:0:0.00:128.47:64.23:121:8:3:64.23:0:0.00:3
12	133225719	gridss208_53o	C	C[12:133225753[	62.67	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-9,9;CQ=62.67;EVENT=gridss208_53;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_53h;RAS=0;RASQ=0.00;REF=372;REFPAIR=16;RP=3;RPQ=62.67;SC=115M82D100M1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.67:0.00:372:16:3:62.67:0:0.00:3
12	133225753	gridss208_53h	G	]12:133225719]G	62.67	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-5,5;CQ=62.67;EVENT=gridss208_53;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_53o;RAS=0;RASQ=0.00;REF=271;REFPAIR=19;RP=3;RPQ=62.67;SC=1X17N1X129M59D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.67:0.00:271:19:3:62.67:0:0.00:3
12	133227459	gridss208_1239b	T	.TTTAATTTTTAACCCAAAAACACACATGGGGGACCCTTTTGACTGAAATTTTTTT	1432.49	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=475.44;BASRP=0;BASSR=19;BEID=asm208-1302,asm208-1303;BEIDH=-1,-1;BEIDL=54,68;BQ=1432.49;BSC=37;BSCQ=957.05;BUM=0;BUMQ=0.00;BVF=38;CAS=0;CASQ=0.00;CQ=757.86;EVENT=gridss208_1239;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=100;REFPAIR=46;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:475.44:0:19:1432.49:37:957.05:0:0.00:38:0.00:0:0.00:0.00:0.00:100:46:0:0.00:0:0.00:0
12	133234742	gridss208_1263b	G	.CACGTGCGTGTG	387.68	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=193.84;BASRP=0;BASSR=10;BEID=asm208-1343;BEIDH=-1;BEIDL=11;BQ=387.68;BSC=10;BSCQ=193.84;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=451.08;EVENT=gridss208_1263;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=451;REFPAIR=47;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:193.84:0:10:387.68:10:193.84:0:0.00:10:0.00:0:0.00:0.00:0.00:451:47:0:0.00:0:0.00:0
12	133234743	gridss208_487b	T	TGTGTATGTG.	387.10	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=193.55;BASRP=0;BASSR=10;BEID=asm208-403;BEIDH=-1;BEIDL=0;BQ=387.10;BSC=10;BSCQ=193.55;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=387.10;EVENT=gridss208_487;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=462;REFPAIR=45;RP=0;RPQ=0.00;SB=0.7;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:193.55:0:10:387.10:10:193.55:0:0.00:10:0.00:0:0.00:0.00:0.00:462:45:0:0.00:0:0.00:0
12	133234928	gridss208_63o	C	C[12:133235018[	232.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.04;ASRP=4;ASSR=0;BA=0;BANRP=3;BANRPQ=64.22;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-434;BEIDH=2;BEIDL=0;BQ=22.69;BSC=1;BSCQ=22.69;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,15;CIRPOS=-18,19;CQ=232.29;EVENT=gridss208_63;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_63h;RAS=0;RASQ=0.00;REF=440;REFPAIR=52;RP=7;RPQ=148.25;SB=1.0;SC=277M1X29N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.04:4:0:3:64.22:0:0.00:0.00:0:0:22.69:1:22.69:0:0.00:1:0.00:0:0.00:232.29:0.00:440:52:7:148.25:0:0.00:7
12	133235001	gridss208_65o	C	C[12:133235130[	106.93	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=85.57;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-435;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-28,28;CQ=171.15;EVENT=gridss208_65;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_65h;RAS=0;RASQ=0.00;REF=433;REFPAIR=43;RP=1;RPQ=21.36;SC=100M1X55N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:85.57:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:106.93:0.00:433:43:1:21.36:0:0.00:4
12	133235018	gridss208_63h	A	]12:133234928]A	232.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=7;BANRPQ=148.25;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-434;BEIDH=0;BEIDL=2;BQ=20.74;BSC=1;BSCQ=20.74;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-18,19;CIRPOS=-15,15;CQ=232.29;EVENT=gridss208_63;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_63o;RAS=1;RASQ=84.04;REF=452;REFPAIR=43;RP=7;RPQ=148.25;SB=0.0;SC=1X36N1X270M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:7:148.25:0:0.00:0.00:0:0:20.74:1:20.74:0:0.00:1:0.00:0:0.00:232.29:84.04:452:43:7:148.25:0:0.00:7
12	133235130	gridss208_65h	C	]12:133235001]C	106.93	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=1;BANRPQ=21.36;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-435;BEIDH=0;BEIDL=2;BQ=62.86;BSC=3;BSCQ=62.86;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-28,28;CQ=171.15;EVENT=gridss208_65;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_65o;RAS=1;RASQ=85.57;REF=323;REFPAIR=22;RP=1;RPQ=21.36;SB=0.33333334;SC=1X55N1X203M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:1:21.36:0:0.00:0.00:0:0:62.86:3:62.86:0:0.00:3:0.00:0:0.00:106.93:85.57:323:22:1:21.36:0:0.00:4
12	133237766	gridss208_514b	A	AGGGCAGGACAGCCGGGGGCAGGGGCCCCTGGGGGCCCCCCACCTTTCCCCCCCCCCCCCTCCCCCCCCC.	850.56	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=132.57;BASRP=0;BASSR=5;BEID=asm208-448;BEIDH=-1;BEIDL=0;BQ=850.56;BSC=29;BSCQ=717.99;BUM=0;BUMQ=0.00;BVF=29;CAS=0;CASQ=0.00;CQ=378.05;EVENT=gridss208_514;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=220;REFPAIR=34;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:132.57:0:5:850.56:29:717.99:0:0.00:29:0.00:0:0.00:0.00:0.00:220:34:0:0.00:0:0.00:0
12	133243789	gridss208_76o	T	T[12:133243858[	84.60	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-14,15;CQ=84.60;EVENT=gridss208_76;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_76h;RAS=0;RASQ=0.00;REF=283;REFPAIR=17;RP=4;RPQ=84.60;SC=273M1X33N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.60:0.00:283:17:4:84.60:0:0.00:4
12	133243858	gridss208_76h	T	]12:133243789]T	84.60	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=63.53;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,15;CIRPOS=-17,17;CQ=84.60;EVENT=gridss208_76;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_76o;RAS=0;RASQ=0.00;REF=396;REFPAIR=22;RP=4;RPQ=84.60;SC=1X28N1X278M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:63.53:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.60:0.00:396:22:4:84.60:0:0.00:4
12	133248576	gridss208_85o	T	T[12:133248690[	167.58	LOW_QUAL	AS=1;ASQ=83.79;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-1501,asm208-576;BEIDH=159,2;BEIDL=0,0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-13,13;CQ=167.58;EVENT=gridss208_85;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_85h;RAS=1;RASQ=0.00;REF=479;REFPAIR=27;RP=4;RPQ=83.79;SB=1.0;SC=281M1X25N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.79:4:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:167.58:0.00:479:27:4:83.79:0:0.00:4
12	133248690	gridss208_85h	C	]12:133248576]C	167.58	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-1501,asm208-576;BEIDH=0,0;BEIDL=159,2;BQ=62.72;BSC=3;BSCQ=62.72;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-13,13;CQ=167.58;EVENT=gridss208_85;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_85o;RAS=1;RASQ=83.79;REF=601;REFPAIR=48;RP=4;RPQ=83.79;SB=0.33333334;SC=1X25N1X177M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:2:42.82:0:0.00:0.00:0:0:62.72:3:62.72:0:0.00:3:0.00:0:0.00:167.58:83.79:601:48:4:83.79:0:0.00:4
12	133249197	gridss208_89o	C	C[12:133249302[	147.50	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.05;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-577;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-23,24;CIRPOS=-23,24;CQ=147.50;EVENT=gridss208_89;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_89h;RAS=0;RASQ=0.00;REF=265;REFPAIR=18;RP=4;RPQ=84.46;SC=260M1X46N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.05:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.50:0.00:265:18:4:84.46:0:0.00:4
12	133249302	gridss208_89h	C	]12:133249197]C	147.50	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=41.64;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-577;BEIDH=0;BEIDL=2;BQ=20.74;BSC=1;BSCQ=20.74;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-23,24;CIRPOS=-23,24;CQ=147.50;EVENT=gridss208_89;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_89o;RAS=1;RASQ=63.05;REF=440;REFPAIR=20;RP=4;RPQ=84.46;SB=1.0;SC=1X46N1X259M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:41.64:0:0.00:0.00:0:0:20.74:1:20.74:0:0.00:1:0.00:0:0.00:147.50:63.05:440:20:4:84.46:0:0.00:4
12	133255540	gridss208_102o	A	A[12:133255745[	170.66	LOW_QUAL	AS=1;ASQ=85.33;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-1569,asm208-690;BEIDH=162,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-19,20;CQ=149.25;EVENT=gridss208_102;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_102h;RAS=1;RASQ=0.00;REF=576;REFPAIR=38;RP=4;RPQ=85.33;SC=101M49D118M1X38N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:85.33:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:170.66:0.00:576:38:4:85.33:0:0.00:4
12	133255745	gridss208_102h	G	]12:133255540]G	170.66	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-1569,asm208-690;BEIDH=0,0;BEIDL=162,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-19,20;CQ=149.25;EVENT=gridss208_102;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_102o;RAS=1;RASQ=85.33;REF=574;REFPAIR=29;RP=4;RPQ=85.33;SC=1X38N1X217M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:170.66:85.33:574:29:4:85.33:0:0.00:4
12	133255894	gridss208_105o	C	C[12:133256032[	213.39	LOW_QUAL	AS=1;ASQ=106.70;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-1567,asm208-691;BEIDH=302,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=213.39;EVENT=gridss208_105;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_105h;RAS=1;RASQ=0.00;REF=435;REFPAIR=34;RP=5;RPQ=106.70;SC=301M1X5N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.70:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:213.39:0.00:435:34:5:106.70:0:0.00:5
12	133256032	gridss208_105h	C	]12:133255894]C	213.39	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-1567,asm208-691;BEIDH=0,0;BEIDL=302,2;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=213.39;EVENT=gridss208_105;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_105o;RAS=1;RASQ=106.70;REF=479;REFPAIR=38;RP=5;RPQ=106.70;SB=0.0;SC=1X5N1X257M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:213.39:106.70:479:38:5:106.70:0:0.00:5
12	133256390	gridss208_109o	A	ATACCCCAAAGCAACAAATTTTGTGGGT[12:133256418[	70.95	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=70.95;EVENT=gridss208_109;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss208_109h;RAS=0;RASQ=0.00;REF=416;REFPAIR=44;RP=2;RPQ=40.98;SB=0.0;SC=168M1X;SR=1;SRQ=29.97;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.95:0.00:416:44:2:40.98:1:29.97:3
12	133256418	gridss208_109h	G	]12:133256390]TACCCCAAAGCAACAAATTTTGTGGGTG	70.95	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=70.95;EVENT=gridss208_109;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss208_109o;RAS=0;RASQ=0.00;REF=447;REFPAIR=30;RP=2;RPQ=40.98;SB=0.0;SC=1X36M101D116M;SR=1;SRQ=29.97;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.95:0.00:447:30:2:40.98:1:29.97:3
12	133257068	gridss208_113o	G	G[12:133257196[	84.53	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-1566;BEIDH=267;BEIDL=0;BQ=91.24;BSC=4;BSCQ=91.24;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-5,5;CQ=84.53;EVENT=gridss208_113;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_113h;RAS=1;RASQ=0.00;REF=310;REFPAIR=23;RP=4;RPQ=84.53;SB=0.25;SC=266M1X40N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:91.24:4:91.24:0:0.00:4:0.00:0:0.00:84.53:0.00:310:23:4:84.53:0:0.00:4
12	133257196	gridss208_113h	A	]12:133257068]A	84.53	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm208-1566;BEIDH=0;BEIDL=267;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-20,21;CQ=84.53;EVENT=gridss208_113;IC=0;IMPRECISE;IQ=0.00;PARID=gridss208_113o;RAS=0;RASQ=0.00;REF=325;REFPAIR=24;RP=4;RPQ=84.53;SC=1X9N1X297M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.53:0.00:325:24:4:84.53:0:0.00:4
13	28569047	gridss211_74b	T	.TAATAAAAGTTAATCAATAATATTTTT	709.25	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=80.59;BASRP=0;BASSR=3;BEID=asm211-65,asm211-67;BEIDH=-1,-1;BEIDL=74,26;BQ=709.25;BSC=23;BSCQ=628.67;BUM=0;BUMQ=0.00;BVF=23;CAS=0;CASQ=0.00;CQ=246.81;EVENT=gridss211_74;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=77;REFPAIR=23;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:80.59:0:3:709.25:23:628.67:0:0.00:23:0.00:0:0.00:0.00:0.00:77:23:0:0.00:0:0.00:0
13	32889238	gridss212_3o	C	C[13:32889463[	126.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.46;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-36;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-32,33;CQ=106.24;EVENT=gridss212_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_3h;RAS=0;RASQ=0.00;REF=398;REFPAIR=26;RP=3;RPQ=63.46;SC=101M41D100M1X64N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.46:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.91:0.00:398:26:3:63.46:0:0.00:3
13	32889463	gridss212_3h	C	]13:32889238]C	126.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-36;BEIDH=0;BEIDL=2;BQ=37.67;BSC=2;BSCQ=37.67;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-32,33;CQ=106.24;EVENT=gridss212_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_3o;RAS=1;RASQ=63.46;REF=317;REFPAIR=18;RP=3;RPQ=63.46;SB=0.5;SC=1X64N1X150M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:37.67:2:37.67:0:0.00:2:0.00:0:0.00:126.91:63.46:317:18:3:63.46:0:0.00:3
13	32892577	gridss212_581b	T	.AATTCCCATTTTTTCCTCCCTCTAGACTCTTTTACAAACTTTTTTATATTTTTGAATTTTTATTTGTGAAATCTTT	238.85	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=84.00;BASRP=0;BASSR=4;BEID=asm212-501;BEIDH=-1;BEIDL=75;BQ=238.85;BSC=5;BSCQ=154.85;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=216.08;EVENT=gridss212_581;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=180;REFPAIR=17;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:84.00:0:4:238.85:5:154.85:0:0.00:5:0.00:0:0.00:0.00:0.00:180:17:0:0.00:0:0.00:0
13	32900551	gridss212_18o	A	A[13:32900717[	148.86	LOW_QUAL	AS=1;ASQ=64.10;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-534,asm212-87;BEIDH=192,2;BEIDL=0,0;BQ=23.48;BSC=1;BSCQ=23.48;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-58,58;CIRPOS=-58,58;CQ=128.21;EVENT=gridss212_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_18h;RAS=1;RASQ=0.00;REF=289;REFPAIR=19;RP=4;RPQ=84.76;SB=1.0;SC=191M1X115N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.10:3:0:0:0.00:0:0.00:0.00:0:0:23.48:1:23.48:0:0.00:1:0.00:0:0.00:148.86:0.00:289:19:4:84.76:0:0.00:4
13	32900717	gridss212_18h	A	]13:32900551]A	148.86	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-534,asm212-87;BEIDH=0,0;BEIDL=192,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-58,58;CIRPOS=-58,58;CQ=128.21;EVENT=gridss212_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_18o;RAS=1;RASQ=64.10;REF=298;REFPAIR=17;RP=4;RPQ=84.76;SC=1X115N1X125M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:148.86:64.10:298:17:4:84.76:0:0.00:4
13	32901021	gridss212_20o	A	A[13:32901207[	170.64	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=85.32;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-86;BEIDH=2;BEIDL=0;BQ=19.17;BSC=1;BSCQ=19.17;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-14,14;CQ=170.64;EVENT=gridss212_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_20h;RAS=0;RASQ=0.00;REF=485;REFPAIR=34;RP=4;RPQ=85.32;SB=1.0;SC=101M15D163M1X27N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:85.32:4:0:0:0.00:0:0.00:0.00:0:0:19.17:1:19.17:0:0.00:1:0.00:0:0.00:170.64:0.00:485:34:4:85.32:0:0.00:4
13	32901207	gridss212_20h	G	]13:32901021]G	170.64	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=4;BANRPQ=85.32;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-86;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-14,14;CQ=170.64;EVENT=gridss212_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_20o;RAS=1;RASQ=85.32;REF=331;REFPAIR=24;RP=4;RPQ=85.32;SC=1X27N1X192M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:4:85.32:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:170.64:85.32:331:24:4:85.32:0:0.00:4
13	32903013	gridss212_614b	G	.AAAGTG	112.05	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=56.03;BASRP=0;BASSR=3;BEID=asm212-537;BEIDH=-1;BEIDL=5;BQ=112.05;BSC=3;BSCQ=56.03;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=112.05;EVENT=gridss212_614;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=456;REFPAIR=16;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:56.03:0:3:112.05:3:56.03:0:0.00:3:0.00:0:0.00:0.00:0.00:456:16:0:0.00:0:0.00:0
13	32903396	gridss212_22o	A	A[13:32903506[	146.55	LOW_QUAL	AS=1;ASQ=62.57;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-106,asm212-543;BEIDH=2,256;BEIDL=0,0;BQ=22.26;BSC=1;BSCQ=22.26;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-2,3;CQ=146.55;EVENT=gridss212_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_22h;RAS=1;RASQ=0.00;REF=327;REFPAIR=20;RP=4;RPQ=83.98;SB=1.0;SC=255M1X51N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.57:3:0:1:21.41:0:0.00:0.00:0:0:22.26:1:22.26:0:0.00:1:0.00:0:0.00:146.55:0.00:327:20:4:83.98:0:0.00:4
13	32903443	gridss212_23o	T	T[13:32903571[	84.87	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.46;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-107;BEIDH=2;BEIDL=0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-73,73;CIRPOS=-11,11;CQ=126.51;EVENT=gridss212_23;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_23h;RAS=0;RASQ=0.00;REF=130;REFPAIR=10;RP=1;RPQ=21.41;SB=0.0;SC=101M4D1X145N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.46:3:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:84.87:0.00:130:10:1:21.41:0:0.00:3
13	32903506	gridss212_22h	T	]13:32903396]T	146.55	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-106,asm212-543;BEIDH=0,0;BEIDL=2,256;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-26,26;CQ=146.55;EVENT=gridss212_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_22o;RAS=1;RASQ=62.57;REF=138;REFPAIR=11;RP=4;RPQ=83.98;SC=1X4N1X173M28D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.55:62.57:138:11:4:83.98:0:0.00:4
13	32903571	gridss212_23h	A	]13:32903443]A	84.87	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-107;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-73,73;CQ=126.51;EVENT=gridss212_23;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_23o;RAS=1;RASQ=63.46;REF=155;REFPAIR=15;RP=1;RPQ=21.41;SC=1X21N1X128D188M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.87:63.46:155:15:1:21.41:0:0.00:3
13	32911070	gridss212_34o	A	A[13:32911121[	125.46	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.73;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-171;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-3,3;CQ=167.99;EVENT=gridss212_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_34h;RAS=0;RASQ=0.00;REF=137;REFPAIR=10;RP=3;RPQ=62.73;SC=179M114D1X13N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.73:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.46:0.00:137:10:3:62.73:0:0.00:3
13	32911121	gridss212_34h	C	]13:32911070]C	125.46	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=62.73;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-171;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-7,7;CQ=167.99;EVENT=gridss212_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_34o;RAS=1;RASQ=62.73;REF=179;REFPAIR=13;RP=3;RPQ=62.73;SC=1X5N1X170M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:3:62.73:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.46:62.73:179:13:3:62.73:0:0.00:3
13	32911160	gridss212_36o	T	T[13:32911266[	169.66	LOW_QUAL	AS=1;ASQ=63.47;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.71;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-170,asm212-613;BEIDH=2,170;BEIDL=0,0;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-19,19;CIRPOS=-43,44;CQ=169.66;EVENT=gridss212_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_36h;RAS=1;RASQ=0.00;REF=209;REFPAIR=11;RP=5;RPQ=106.18;SB=1.0;SC=269M1X37N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.47:3:0:2:42.71:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:0:0.00:0:0.00:169.66:0.00:209:11:5:106.18:0:0.00:5
13	32911266	gridss212_36h	C	]13:32911160]C	169.66	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-170,asm212-613;BEIDH=0,0;BEIDL=2,170;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-43,44;CIRPOS=-19,19;CQ=169.66;EVENT=gridss212_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_36o;RAS=1;RASQ=63.47;REF=290;REFPAIR=15;RP=5;RPQ=106.18;SC=1X86N1X222M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:169.66:63.47:290:15:5:106.18:0:0.00:5
13	32911267	gridss212_38o	T	T[13:32911331[	83.55	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.13;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-169;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=0,1;CQ=147.19;EVENT=gridss212_38;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_38h;RAS=0;RASQ=0.00;REF=310;REFPAIR=15;RP=1;RPQ=20.42;SC=100M1X47N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.13:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:83.55:0.00:310:15:1:20.42:0:0.00:3
13	32911331	gridss212_38h	T	]13:32911267]T	83.55	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-169;BEIDH=0;BEIDL=2;BQ=27.54;BSC=1;BSCQ=27.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-24,24;CQ=147.19;EVENT=gridss212_38;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_38o;RAS=1;RASQ=63.13;REF=257;REFPAIR=29;RP=1;RPQ=20.42;SB=1.0;SC=2X97D134M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:27.54:1:27.54:0:0.00:1:0.00:0:0.00:83.55:63.13:257:29:1:20.42:0:0.00:3
13	32914145	gridss212_54o	T	T[13:32914376[	213.64	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=106.71;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-167;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-9,9;CQ=213.64;EVENT=gridss212_54;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_54h;RAS=0;RASQ=0.00;REF=284;REFPAIR=18;RP=5;RPQ=106.93;SC=285M1X21N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.71:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:213.64:0.00:284:18:5:106.93:0:0.00:6
13	32914376	gridss212_54h	A	]13:32914145]A	213.64	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=5;BANRPQ=106.93;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-167;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-11,11;CQ=213.64;EVENT=gridss212_54;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_54o;RAS=1;RASQ=106.71;REF=332;REFPAIR=21;RP=5;RPQ=106.93;SC=1X17N1X260M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:5:106.93:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:213.64:106.71:332:21:5:106.93:0:0.00:6
13	32914773	gridss212_64o	A	A[13:32914883[	169	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.50;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-164;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-15,16;CQ=169.00;EVENT=gridss212_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_64h;RAS=0;RASQ=0.00;REF=292;REFPAIR=13;RP=4;RPQ=84.50;SC=276M1X30N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.50:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:169.00:0.00:292:13:4:84.50:0:0.00:4
13	32914883	gridss212_64h	A	]13:32914773]A	169	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=4;BANRPQ=84.50;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-164;BEIDH=0;BEIDL=2;BQ=24.75;BSC=1;BSCQ=24.75;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-15,16;CQ=169.00;EVENT=gridss212_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_64o;RAS=1;RASQ=84.50;REF=113;REFPAIR=13;RP=4;RPQ=84.50;SB=0.0;SC=1X30N1X223M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:4:84.50:0:0.00:0.00:0:0:24.75:1:24.75:0:0.00:1:0.00:0:0.00:169.00:84.50:113:13:4:84.50:0:0.00:4
13	32915008	gridss212_66o	A	A[13:32915153[	126.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.09;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-204;BEIDH=2;BEIDL=0;BQ=24.64;BSC=1;BSCQ=24.64;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=126.17;EVENT=gridss212_66;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_66h;RAS=0;RASQ=0.00;REF=180;REFPAIR=17;RP=3;RPQ=63.09;SB=0.0;SC=101M51D138M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.09:3:0:0:0.00:0:0.00:0.00:0:0:24.64:1:24.64:0:0.00:1:0.00:0:0.00:126.17:0.00:180:17:3:63.09:0:0.00:3
13	32915153	gridss212_66h	A	]13:32915008]A	126.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=63.09;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-204;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=126.17;EVENT=gridss212_66;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_66o;RAS=1;RASQ=63.09;REF=220;REFPAIR=17;RP=3;RPQ=63.09;SC=1X16N1X168M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:3:63.09:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.17:63.09:220:17:3:63.09:0:0.00:3
13	32915207	gridss212_68o	G	G[13:32915397[	171.15	LOW_QUAL	AS=1;ASQ=85.57;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-203,asm212-637;BEIDH=2,141;BEIDL=0,0;BQ=44.75;BSC=2;BSCQ=44.75;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-32,32;CQ=171.15;EVENT=gridss212_68;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_68h;RAS=1;RASQ=0.00;REF=295;REFPAIR=19;RP=4;RPQ=85.57;SB=0.0;SC=101M2D140M1X63N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:85.57:4:0:0:0.00:0:0.00:0.00:0:0:44.75:2:44.75:0:0.00:2:0.00:0:0.00:171.15:0.00:295:19:4:85.57:0:0.00:4
13	32915397	gridss212_68h	C	]13:32915207]C	171.15	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-203,asm212-637;BEIDH=0,0;BEIDL=2,141;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-32,32;CQ=171.15;EVENT=gridss212_68;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_68o;RAS=1;RASQ=85.57;REF=427;REFPAIR=38;RP=4;RPQ=85.57;SB=1.0;SC=1X63N1X135M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:1:21.41:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:171.15:85.57:427:38:4:85.57:0:0.00:4
13	32915412	gridss212_319b	A	AGAGTGTTA.	210.50	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=94.98;BASRP=0;BASSR=5;BEID=asm212-192;BEIDH=-1;BEIDL=0;BQ=210.50;BSC=6;BSCQ=115.52;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=189.97;EVENT=gridss212_319;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=466;REFPAIR=52;RP=0;RPQ=0.00;SB=0.27272728;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:94.98:0:5:210.50:6:115.52:0:0.00:6:0.00:0:0.00:0.00:0.00:466:52:0:0.00:0:0.00:0
13	32915415	gridss212_697b	A	.CATGCTAACA	229.12	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=114.56;BASRP=0;BASSR=6;BEID=asm212-631;BEIDH=-1;BEIDL=9;BQ=229.12;BSC=6;BSCQ=114.56;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=229.12;EVENT=gridss212_697;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=465;REFPAIR=53;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:114.56:0:6:229.12:6:114.56:0:0.00:6:0.00:0:0.00:0.00:0.00:465:53:0:0.00:0:0.00:0
13	32928991	gridss212_78o	A	A[13:32929129[	64.15	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-19,20;CQ=64.15;EVENT=gridss212_78;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_78h;RAS=0;RASQ=0.00;REF=354;REFPAIR=19;RP=3;RPQ=64.15;SC=101M9D193M1X3N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.15:0.00:354:19:3:64.15:0:0.00:3
13	32929129	gridss212_78h	A	]13:32928991]A	64.15	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-2,2;CQ=64.15;EVENT=gridss212_78;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_78o;RAS=0;RASQ=0.00;REF=328;REFPAIR=36;RP=3;RPQ=64.15;SC=1X38N1X131M36D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.15:0.00:328:36:3:64.15:0:0.00:3
13	32945495	gridss212_98o	G	G[13:32945646[	170.65	LOW_QUAL	AS=1;ASQ=85.32;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-311,asm212-744;BEIDH=2,148;BEIDL=0,0;BQ=60.63;BSC=2;BSCQ=60.63;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-31,32;CIRPOS=-31,32;CQ=170.65;EVENT=gridss212_98;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_98h;RAS=1;RASQ=0.00;REF=494;REFPAIR=21;RP=4;RPQ=85.32;SB=0.0;SC=244M1X62N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:85.32:4:0:0:0.00:0:0.00:0.00:0:0:60.63:2:60.63:0:0.00:2:0.00:0:0.00:170.65:0.00:494:21:4:85.32:0:0.00:4
13	32945646	gridss212_98h	T	]13:32945495]T	170.65	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-311,asm212-744;BEIDH=0,0;BEIDL=2,148;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-31,32;CIRPOS=-31,32;CQ=170.65;EVENT=gridss212_98;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_98o;RAS=1;RASQ=85.32;REF=66;REFPAIR=10;RP=4;RPQ=85.32;SC=1X62N1X179M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:170.65:85.32:66:10:4:85.32:0:0.00:4
13	32952165	gridss212_101o	T	T[13:32952256[	64.03	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-37,37;CIRPOS=-38,39;CQ=64.03;EVENT=gridss212_101;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_101h;RAS=0;RASQ=0.00;REF=229;REFPAIR=13;RP=3;RPQ=64.03;SC=233M1X73N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.03:0.00:229:13:3:64.03:0:0.00:3
13	32952256	gridss212_101h	G	]13:32952165]G	64.03	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-38,39;CIRPOS=-37,37;CQ=64.03;EVENT=gridss212_101;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_101o;RAS=0;RASQ=0.00;REF=50;REFPAIR=1;RP=3;RPQ=64.03;SC=1X76N1X100M2D128M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:64.03:0.00:50:1:3:64.03:0:0.00:3
13	32953338	gridss212_105o	C	C[13:32953558[	147.95	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.61;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-339;BEIDH=2;BEIDL=0;BQ=51.36;BSC=2;BSCQ=51.36;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-3,4;CIRPOS=-3,4;CQ=147.95;EVENT=gridss212_105;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_105h;RAS=0;RASQ=0.00;REF=584;REFPAIR=39;RP=3;RPQ=63.34;SB=1.0;SC=101M15D184M1X6N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.61:4:0:0:0.00:0:0.00:0.00:0:0:51.36:2:51.36:0:0.00:2:0.00:0:0.00:147.95:0.00:584:39:3:63.34:0:0.00:4
13	32953558	gridss212_105h	A	]13:32953338]A	147.95	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-339;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,4;CIRPOS=-3,4;CQ=147.95;EVENT=gridss212_105;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_105o;RAS=1;RASQ=84.61;REF=230;REFPAIR=17;RP=3;RPQ=63.34;SC=1X6N1X188M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.95:84.61:230:17:3:63.34:0:0.00:4
13	32959280	gridss212_112o	G	G[13:32959320[	147.52	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.38;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-371;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-11,12;CQ=147.52;EVENT=gridss212_112;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_112h;RAS=0;RASQ=0.00;REF=425;REFPAIR=36;RP=4;RPQ=84.14;SC=116M88D100M1X2N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.38:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.52:0.00:425:36:4:84.14:0:0.00:4
13	32959320	gridss212_112h	C	]13:32959280]C	147.52	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=63.38;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-371;BEIDH=0;BEIDL=2;BQ=28.37;BSC=1;BSCQ=28.37;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-11,12;CIRPOS=-1,2;CQ=147.52;EVENT=gridss212_112;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_112o;RAS=1;RASQ=63.38;REF=438;REFPAIR=37;RP=4;RPQ=84.14;SB=1.0;SC=1X22N1X176M7D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:3:63.38:0:0.00:0.00:0:0:28.37:1:28.37:0:0.00:1:0.00:0:0.00:147.52:63.38:438:37:4:84.14:0:0.00:4
13	32969173	gridss212_131o	T	T[13:32969343[	209.10	LOW_QUAL	AS=1;ASQ=104.55;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-444,asm212-869;BEIDH=2,160;BEIDL=0,0;BQ=19.97;BSC=1;BSCQ=19.97;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=188.95;EVENT=gridss212_131;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_131h;RAS=1;RASQ=0.00;REF=447;REFPAIR=37;RP=5;RPQ=104.55;SB=1.0;SC=301M1X5N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.55:5:0:0:0.00:0:0.00:0.00:0:0:19.97:1:19.97:0:0.00:1:0.00:0:0.00:209.10:0.00:447:37:5:104.55:0:0.00:5
13	32969343	gridss212_131h	G	]13:32969173]G	209.10	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-444,asm212-869;BEIDH=0,0;BEIDL=2,160;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=188.95;EVENT=gridss212_131;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_131o;RAS=1;RASQ=104.55;REF=295;REFPAIR=28;RP=5;RPQ=104.55;SC=1X5N1X181M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:2:42.82:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:209.10:104.55:295:28:5:104.55:0:0.00:5
13	32973925	gridss212_879b	T	.AAGCAGGAGACCAACATCTATTCACAGTATTCTCCTATTTGTTTAACCACT	620.16	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=26.07;BASRP=0;BASSR=1;BEID=asm212-828;BEIDH=-1;BEIDL=50;BQ=620.16;BSC=22;BSCQ=594.09;BUM=0;BUMQ=0.00;BVF=22;CAS=0;CASQ=0.00;CQ=162.25;EVENT=gridss212_879;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=159;REFPAIR=20;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:26.07:0:1:620.16:22:594.09:0:0.00:22:0.00:0:0.00:0.00:0.00:159:20:0:0.00:0:0.00:0
13	48934371	gridss213_4o	A	A[13:48934526[	148.05	LOW_QUAL	AS=1;ASQ=63.32;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm213-144,asm213-27;BEIDH=244,2;BEIDL=0,0;BQ=25.03;BSC=1;BSCQ=25.03;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-47,47;CIRPOS=-21,21;CQ=148.05;EVENT=gridss213_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss213_4h;RAS=1;RASQ=0.00;REF=284;REFPAIR=26;RP=4;RPQ=84.73;SB=0.0;SC=243M1X93N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.32:3:0:0:0.00:0:0.00:0.00:0:0:25.03:1:25.03:0:0.00:1:0.00:0:0.00:148.05:0.00:284:26:4:84.73:0:0.00:4
13	48934526	gridss213_4h	A	]13:48934371]A	148.05	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm213-144,asm213-27;BEIDH=0,0;BEIDL=244,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-47,47;CQ=148.05;EVENT=gridss213_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss213_4o;RAS=1;RASQ=63.32;REF=246;REFPAIR=18;RP=4;RPQ=84.73;SC=1X41N1X105M59D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:148.05:63.32:246:18:4:84.73:0:0.00:4
13	49019128	gridss213_185b	T	.ATAGTAGT	157.61	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=59.97;BASRP=0;BASSR=3;BEID=asm213-157;BEIDH=-1;BEIDL=7;BQ=157.61;BSC=5;BSCQ=97.64;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=119.93;EVENT=gridss213_185;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=193;REFPAIR=28;RP=0;RPQ=0.00;SB=0.75;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:59.97:0:3:157.61:5:97.64:0:0.00:5:0.00:0:0.00:0.00:0.00:193:28:0:0.00:0:0.00:0
13	49039118	gridss213_102b	T	TTTTTTTTTTTCCTCAAACTTAAAAACTTTTTTTTAACAA.	749.06	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=362.89;BASRP=0;BASSR=15;BEID=asm213-77;BEIDH=-1;BEIDL=0;BQ=749.06;BSC=15;BSCQ=386.17;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=715.78;EVENT=gridss213_102;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=49;REFPAIR=17;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:362.89:0:15:749.06:15:386.17:0:0.00:16:0.00:0:0.00:0.00:0.00:49:17:0:0.00:0:0.00:0
13	93875273	gridss218_21b	T	.GCAGAAAATTGTGGGTTTTGGTGTAAAATGGCCCGACTTCCTTCTTAAAGGGGGTAAACCTTTTTTTTT	863.61	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=470.79;BASRP=0;BASSR=16;BEID=asm218-14;BEIDH=-1;BEIDL=68;BQ=863.61;BSC=14;BSCQ=392.82;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=884.44;EVENT=gridss218_21;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=52;REFPAIR=8;RP=0;RPQ=0.00;SB=0.033333335;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:470.79:0:16:863.61:14:392.82:0:0.00:16:0.00:0:0.00:0.00:0.00:52:8:0:0.00:0:0.00:0
13	93875293	gridss218_4b	T	TTTTTTTTTTCAAAATTTTGACAAAAAACCTTTGGAAAAAATGGGGTTTTAACCCCCCCCCCACCCCAGCCAAAAGTG.	1185.78	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=617.25;BASRP=0;BASSR=24;BEID=asm218-1;BEIDH=-1;BEIDL=0;BQ=1185.78;BSC=23;BSCQ=568.53;BUM=0;BUMQ=0.00;BVF=25;CAS=0;CASQ=0.00;CQ=1156.54;EVENT=gridss218_4;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=53;REFPAIR=11;RP=0;RPQ=0.00;SB=0.85106385;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:617.25:0:24:1185.78:23:568.53:0:0.00:25:0.00:0:0.00:0.00:0.00:53:11:0:0.00:0:0.00:0
13	108861223	gridss219_25o	A	A[13:108861300[	145.57	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.26;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm219-141;BEIDH=2;BEIDL=0;BQ=19.56;BSC=1;BSCQ=19.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-41,41;CIRPOS=-14,14;CQ=145.57;EVENT=gridss219_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss219_25h;RAS=0;RASQ=0.00;REF=387;REFPAIR=21;RP=4;RPQ=83.32;SB=0.0;SC=225M1X81N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.26:3:0:0:0.00:0:0.00:0.00:0:0:19.56:1:19.56:0:0.00:1:0.00:0:0.00:145.57:0.00:387:21:4:83.32:0:0.00:4
13	108861300	gridss219_25h	G	]13:108861223]G	145.57	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm219-141;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-41,41;CQ=145.57;EVENT=gridss219_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss219_25o;RAS=1;RASQ=62.26;REF=398;REFPAIR=30;RP=4;RPQ=83.32;SC=1X27N1X192M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:145.57:62.26:398:30:4:83.32:0:0.00:4
13	108861885	gridss219_28o	A	A[13:108861991[	84.06	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=69.58;BSC=3;BSCQ=69.58;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-30,31;CQ=84.06;EVENT=gridss219_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss219_28h;RAS=0;RASQ=0.00;REF=491;REFPAIR=32;RP=4;RPQ=84.06;SB=0.33333334;SC=101M15D155M1X35N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:69.58:3:69.58:0:0.00:3:0.00:0:0.00:84.06:0.00:491:32:4:84.06:0:0.00:4
13	108861991	gridss219_28h	T	]13:108861885]T	84.06	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-30,31;CIRPOS=-18,18;CQ=84.06;EVENT=gridss219_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss219_28o;RAS=0;RASQ=0.00;REF=368;REFPAIR=19;RP=4;RPQ=84.06;SB=1.0;SC=1X60N1X246M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:84.06:0.00:368:19:4:84.06:0:0.00:4
14	45606511	gridss224_5o	T	T[14:45606575[	209.85	LOW_QUAL	AS=1;ASQ=83.81;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm224-190,asm224-50;BEIDH=337,2;BEIDL=0,0;BQ=42.76;BSC=2;BSCQ=42.76;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-34,35;CIRPOS=-4,4;CQ=188.43;EVENT=gridss224_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss224_5h;RAS=1;RASQ=0.00;REF=268;REFPAIR=18;RP=6;RPQ=126.04;SB=1.0;SC=336M1X68N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.81:4:0:0:0.00:0:0.00:0.00:0:0:42.76:2:42.76:0:0.00:2:0.00:0:0.00:209.85:0.00:268:18:6:126.04:0:0.00:6
14	45606575	gridss224_5h	C	]14:45606511]C	209.85	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm224-190,asm224-50;BEIDH=0,0;BEIDL=337,2;BQ=20.23;BSC=1;BSCQ=20.23;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-34,35;CQ=188.43;EVENT=gridss224_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss224_5o;RAS=1;RASQ=83.81;REF=406;REFPAIR=21;RP=6;RPQ=126.04;SB=0.0;SC=1X7N1X100M8D146M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:20.23:1:20.23:0:0.00:1:0.00:0:0.00:209.85:83.81:406:21:6:126.04:0:0.00:6
14	45644672	gridss224_16o	A	A[14:45644834[	145.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.25;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm224-102;BEIDH=2;BEIDL=0;BQ=19.00;BSC=1;BSCQ=19.00;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-14,15;CQ=145.91;EVENT=gridss224_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss224_16h;RAS=0;RASQ=0.00;REF=236;REFPAIR=24;RP=4;RPQ=83.66;SB=1.0;SC=101M29D143M1X33N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.25:3:0:0:0.00:0:0.00:0.00:0:0:19.00:1:19.00:0:0.00:1:0.00:0:0.00:145.91:0.00:236:24:4:83.66:0:0.00:4
14	45644834	gridss224_16h	A	]14:45644672]A	145.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm224-102;BEIDH=0;BEIDL=2;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-14,15;CIRPOS=-17,17;CQ=145.91;EVENT=gridss224_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss224_16o;RAS=1;RASQ=62.25;REF=240;REFPAIR=27;RP=4;RPQ=83.66;SB=1.0;SC=1X28N1X176M1D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:145.91:62.25:240:27:4:83.66:0:0.00:4
14	68331717	gridss227_56b	T	TTTTTTAAAGGTCCCCCAGGTTGGGAAAAAACTTTGTTTTTTAAAATAAT.	401.47	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=141.82;BASRP=0;BASSR=6;BEID=asm227-15;BEIDH=-1;BEIDL=0;BQ=401.47;BSC=11;BSCQ=259.65;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=302.95;EVENT=gridss227_56;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=76;REFPAIR=8;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:141.82:0:6:401.47:11:259.65:0:0.00:11:0.00:0:0.00:0.00:0.00:76:8:0:0.00:0:0.00:0
14	69006906	gridss227_167b	T	TAAATAAGGGATCTACAGGTTTCAAATGATTTCCTTGAG.	478.57	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=97.24;BASRP=0;BASSR=4;BEID=asm227-149;BEIDH=-1;BEIDL=0;BQ=478.57;BSC=14;BSCQ=381.33;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=194.48;EVENT=gridss227_167;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=58;REFPAIR=11;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:97.24:0:4:478.57:14:381.33:0:0.00:14:0.00:0:0.00:0.00:0.00:58:11:0:0.00:0:0.00:0
14	69061972	gridss227_27o	C	C[14:69062153[	103.98	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.35;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm227-181;BEIDH=2;BEIDL=0;BQ=20.10;BSC=1;BSCQ=20.10;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-15,16;CQ=103.98;EVENT=gridss227_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss227_27h;RAS=0;RASQ=0.00;REF=440;REFPAIR=31;RP=2;RPQ=41.64;SB=1.0;SC=101M75D100M1X30N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.35:3:0:0:0.00:0:0.00:0.00:0:0:20.10:1:20.10:0:0.00:1:0.00:0:0.00:103.98:0.00:440:31:2:41.64:0:0.00:3
14	69062153	gridss227_27h	A	]14:69061972]A	103.98	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm227-181;BEIDH=0;BEIDL=2;BQ=22.77;BSC=1;BSCQ=22.77;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-15,16;CQ=103.98;EVENT=gridss227_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss227_27o;RAS=1;RASQ=62.35;REF=431;REFPAIR=21;RP=2;RPQ=41.64;SB=0.0;SC=1X30N1X159M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.41:0:0.00:0.00:0:0:22.77:1:22.77:0:0.00:1:0.00:0:0.00:103.98:62.35:431:21:2:41.64:0:0.00:3
14	69062266	gridss227_30o	C	C[14:69062349[	275.32	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=147.99;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm227-180;BEIDH=2;BEIDL=0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=275.32;EVENT=gridss227_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss227_30h;RAS=0;RASQ=0.00;REF=430;REFPAIR=33;RP=6;RPQ=127.33;SB=0.0;SC=290M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:147.99:7:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:275.32:0.00:430:33:6:127.33:0:0.00:7
14	69062349	gridss227_30h	G	]14:69062266]G	275.32	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=7;ASSR=0;BA=0;BANRP=6;BANRPQ=127.33;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm227-180;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=275.32;EVENT=gridss227_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss227_30o;RAS=1;RASQ=147.99;REF=284;REFPAIR=23;RP=6;RPQ=127.33;SC=1X16N1X280M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:7:0:6:127.33:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:275.32:147.99:284:23:6:127.33:0:0.00:7
14	69077913	gridss227_32o	A	A[14:69077979[	250.74	LOW_QUAL	AS=1;ASQ=125.37;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm227-199,asm227-404;BEIDH=2,218;BEIDL=0,0;BQ=63.52;BSC=3;BSCQ=63.52;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-45,45;CIRPOS=-19,19;CQ=250.74;EVENT=gridss227_32;IC=0;IMPRECISE;IQ=0.00;PARID=gridss227_32h;RAS=1;RASQ=0.00;REF=438;REFPAIR=30;RP=6;RPQ=125.37;SB=0.0;SC=217M1X89N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:125.37:6:0:0:0.00:0:0.00:0.00:0:0:63.52:3:63.52:0:0.00:3:0.00:0:0.00:250.74:0.00:438:30:6:125.37:0:0.00:6
14	69077979	gridss227_32h	T	]14:69077913]T	250.74	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm227-199,asm227-404;BEIDH=0,0;BEIDL=2,218;BQ=19.56;BSC=1;BSCQ=19.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-19,19;CIRPOS=-45,45;CQ=250.74;EVENT=gridss227_32;IC=0;IMPRECISE;IQ=0.00;PARID=gridss227_32o;RAS=1;RASQ=125.37;REF=506;REFPAIR=29;RP=6;RPQ=125.37;SB=1.0;SC=1X37N1X269M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:19.56:1:19.56:0:0.00:1:0.00:0:0.00:250.74:125.37:506:29:6:125.37:0:0.00:6
14	69149631	gridss227_406b	T	.AAAAATTTGGAGGTTTTGGCT	182.60	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=40.81;BASRP=0;BASSR=2;BEID=asm227-409;BEIDH=-1;BEIDL=20;BQ=182.60;BSC=7;BSCQ=141.78;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=145.25;EVENT=gridss227_406;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=41;REFPAIR=4;RP=0;RPQ=0.00;SB=0.27272728;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:40.81:0:2:182.60:7:141.78:0:0.00:7:0.00:0:0.00:0.00:0.00:41:4:0:0.00:0:0.00:0
14	69149647	gridss227_219b	T	TTGGGAGTTAAACTATGACTTTGAAAGGGGAAAGAAGCAGG.	404.88	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=89.37;BASRP=0;BASSR=4;BEID=asm227-206;BEIDH=-1;BEIDL=0;BQ=404.88;BSC=12;BSCQ=315.51;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=250.09;EVENT=gridss227_219;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=57;REFPAIR=13;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:89.37:0:4:404.88:12:315.51:0:0.00:12:0.00:0:0.00:0.00:0.00:57:13:0:0.00:0:0.00:0
14	100794450	gridss230_169b	T	.GGACATCTACAGAAAGACCAACCCCCCCAGGACCAGCCAGAAGGTTTAATGATTT	556.75	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=147.07;BASRP=0;BASSR=6;BEID=asm230-140;BEIDH=-1;BEIDL=54;BQ=556.75;BSC=16;BSCQ=409.68;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=448.69;EVENT=gridss230_169;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=96;REFPAIR=20;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:147.07:0:6:556.75:16:409.68:0:0.00:16:0.00:0:0.00:0.00:0.00:96:20:0:0.00:0:0.00:0
14	104172070	gridss230_13o	C	C[14:104172247[	64.23	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm230-225;BEIDH=243;BEIDL=0;BQ=74.63;BSC=3;BSCQ=74.63;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-39,40;CQ=64.23;EVENT=gridss230_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss230_13h;RAS=1;RASQ=0.00;REF=412;REFPAIR=31;RP=3;RPQ=64.23;SB=0.33333334;SC=242M1X64N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:74.63:3:74.63:0:0.00:3:0.00:0:0.00:64.23:0.00:412:31:3:64.23:0:0.00:3
14	104172247	gridss230_13h	T	]14:104172070]T	64.23	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm230-225;BEIDH=0;BEIDL=243;BQ=19.17;BSC=1;BSCQ=19.17;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-39,40;CIRPOS=-32,33;CQ=64.23;EVENT=gridss230_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss230_13o;RAS=0;RASQ=0.00;REF=278;REFPAIR=15;RP=3;RPQ=64.23;SB=0.0;SC=1X78N1X104M23D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.17:1:19.17:0:0.00:1:0.00:0:0.00:64.23:0.00:278:15:3:64.23:0:0.00:3
15	40987750	gridss235_3o	C	C[15:40987889[	167.72	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.86;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm235-11;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-10,10;CIRPOS=-10,10;CQ=167.72;EVENT=gridss235_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss235_3h;RAS=0;RASQ=0.00;REF=326;REFPAIR=35;RP=4;RPQ=83.86;SC=101M56D130M1X19N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.86:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.72:0.00:326:35:4:83.86:0:0.00:4
15	40987889	gridss235_3h	T	]15:40987750]T	167.72	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm235-11;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-10,10;CIRPOS=-10,10;CQ=167.72;EVENT=gridss235_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss235_3o;RAS=1;RASQ=83.86;REF=395;REFPAIR=28;RP=4;RPQ=83.86;SC=1X19N1X211M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.72:83.86:395:28:4:83.86:0:0.00:4
15	41023553	gridss235_6o	A	A[15:41023642[	187.21	LOW_QUAL	AS=1;ASQ=104.31;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm235-289,asm235-51;BEIDH=163,2;BEIDL=0,0;BQ=42.16;BSC=2;BSCQ=42.16;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-26,27;CIRPOS=-26,27;CQ=187.21;EVENT=gridss235_6;IC=0;IMPRECISE;IQ=0.00;PARID=gridss235_6h;RAS=1;RASQ=0.00;REF=514;REFPAIR=36;RP=4;RPQ=82.90;SB=1.0;SC=254M1X52N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.31:5:0:0:0.00:0:0.00:0.00:0:0:42.16:2:42.16:0:0.00:2:0.00:0:0.00:187.21:0.00:514:36:4:82.90:0:0.00:5
15	41023642	gridss235_6h	T	]15:41023553]T	187.21	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm235-289,asm235-51;BEIDH=0,0;BEIDL=163,2;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-26,27;CIRPOS=-26,27;CQ=187.21;EVENT=gridss235_6;IC=0;IMPRECISE;IQ=0.00;PARID=gridss235_6o;RAS=1;RASQ=104.31;REF=726;REFPAIR=45;RP=4;RPQ=82.90;SB=1.0;SC=1X52N1X188M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:187.21:104.31:726:45:4:82.90:0:0.00:5
15	43720171	gridss235_162b	A	AAAAAAAAAAA.	206.41	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=61.12;BASRP=0;BASSR=3;BEID=asm235-132;BEIDH=-1;BEIDL=0;BQ=206.41;BSC=6;BSCQ=145.28;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=122.25;EVENT=gridss235_162;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=54;REFPAIR=6;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:61.12:0:3:206.41:6:145.28:0:0.00:6:0.00:0:0.00:0.00:0.00:54:6:0:0.00:0:0.00:0
15	43784052	gridss235_36o	C	C[15:43784140[	147.26	LOW_QUAL	AS=1;ASQ=62.92;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm235-209,asm235-426;BEIDH=2,229;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-39,40;CIRPOS=-39,40;CQ=125.85;EVENT=gridss235_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss235_36h;RAS=1;RASQ=0.00;REF=95;REFPAIR=6;RP=4;RPQ=84.33;SC=312M1X78N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.92:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.26:0.00:95:6:4:84.33:0:0.00:4
15	43784140	gridss235_36h	C	]15:43784052]C	147.26	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm235-209,asm235-426;BEIDH=0,0;BEIDL=2,229;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-39,40;CIRPOS=-39,40;CQ=125.85;EVENT=gridss235_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss235_36o;RAS=1;RASQ=62.92;REF=138;REFPAIR=8;RP=4;RPQ=84.33;SC=1X78N1X239M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.26:62.92:138:8:4:84.33:0:0.00:4
15	67153598	gridss237_8b	A	ACGTGT.	135.53	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=56.03;BASRP=0;BASSR=3;BEID=asm237-7;BEIDH=-1;BEIDL=0;BQ=135.53;BSC=4;BSCQ=79.51;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=112.05;EVENT=gridss237_8;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=224;REFPAIR=11;RP=0;RPQ=0.00;SB=0.5714286;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:56.03:0:3:135.53:4:79.51:0:0.00:4:0.00:0:0.00:0.00:0.00:224:11:0:0.00:0:0.00:0
15	75643616	gridss238_128b	T	.TCCGAGGTTATATACCCCCCCCCCCCTATCCCCCCTTATTTTTT	354.17	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=108.00;BASRP=0;BASSR=5;BEID=asm238-120;BEIDH=-1;BEIDL=43;BQ=354.17;BSC=11;BSCQ=246.17;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=238.69;EVENT=gridss238_128;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=51;REFPAIR=8;RP=0;RPQ=0.00;SB=0.0625;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:108.00:0:5:354.17:11:246.17:0:0.00:11:0.00:0:0.00:0.00:0.00:51:8:0:0.00:0:0.00:0
15	75645566	gridss238_151b	A	.TTATACACA	229.18	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=114.59;BASRP=0;BASSR=6;BEID=asm238-122;BEIDH=-1;BEIDL=8;BQ=229.18;BSC=6;BSCQ=114.59;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=229.18;EVENT=gridss238_151;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=162;REFPAIR=5;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:114.59:0:6:229.18:6:114.59:0:0.00:6:0.00:0:0.00:0.00:0.00:162:5:0:0.00:0:0.00:0
15	75645591	gridss238_62b	C	CACACGCAC.	156.28	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=58.38;BASRP=0;BASSR=3;BEID=asm238-29;BEIDH=-1;BEIDL=0;BQ=156.28;BSC=5;BSCQ=97.89;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=137.60;EVENT=gridss238_62;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=209;REFPAIR=14;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:58.38:0:3:156.28:5:97.89:0:0.00:5:0.00:0:0.00:0.00:0.00:209:14:0:0.00:0:0.00:0
15	89802063	gridss240_2o	T	T[15:89802104[	272.21	LOW_QUAL	AS=1;ASQ=125.82;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-18,asm240-645;BEIDH=2,263;BEIDL=0,0;BQ=26.25;BSC=1;BSCQ=26.25;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-22,23;CIRPOS=0,1;CQ=272.21;EVENT=gridss240_2;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_2h;RAS=1;RASQ=0.00;REF=480;REFPAIR=25;RP=7;RPQ=146.38;SB=0.0;SC=262M1X44N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:125.82:6:0:0:0.00:0:0.00:0.00:0:0:26.25:1:26.25:0:0.00:1:0.00:0:0.00:272.21:0.00:480:25:7:146.38:0:0.00:7
15	89802104	gridss240_2h	A	]15:89802063]A	272.21	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-18,asm240-645;BEIDH=0,0;BEIDL=2,263;BQ=24.75;BSC=1;BSCQ=24.75;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-22,23;CQ=272.21;EVENT=gridss240_2;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_2o;RAS=1;RASQ=125.82;REF=535;REFPAIR=33;RP=7;RPQ=146.38;SB=0.0;SC=2X306M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:24.75:1:24.75:0:0.00:1:0.00:0:0.00:272.21:125.82:535:33:7:146.38:0:0.00:7
15	89802295	gridss240_5o	G	G[15:89802403[	167.33	LOW_QUAL	AS=1;ASQ=62.64;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-19,asm240-646;BEIDH=2,137;BEIDL=0,0;BQ=68.31;BSC=3;BSCQ=68.31;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-43,43;CIRPOS=-30,30;CQ=167.33;EVENT=gridss240_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_5h;RAS=1;RASQ=0.00;REF=606;REFPAIR=38;RP=5;RPQ=104.69;SB=0.33333334;SC=221M1X85N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.64:3:0:0:0.00:0:0.00:0.00:0:0:68.31:3:68.31:0:0.00:3:0.00:0:0.00:167.33:0.00:606:38:5:104.69:0:0.00:5
15	89802403	gridss240_5h	T	]15:89802295]T	167.33	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-19,asm240-646;BEIDH=0,0;BEIDL=2,137;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-30,30;CIRPOS=-43,43;CQ=167.33;EVENT=gridss240_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_5o;RAS=1;RASQ=62.64;REF=509;REFPAIR=38;RP=5;RPQ=104.69;SC=1X59N1X242M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.33:62.64:509:38:5:104.69:0:0.00:5
15	89850973	gridss240_26o	G	G[15:89851120[	126.02	LOW_QUAL	AS=1;ASQ=63.01;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-121,asm240-762;BEIDH=2,168;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-7,8;CQ=126.02;EVENT=gridss240_26;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_26h;RAS=1;RASQ=0.00;REF=161;REFPAIR=9;RP=3;RPQ=63.01;SC=168M24D100M1X14N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.01:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.02:0.00:161:9:3:63.01:0:0.00:3
15	89851120	gridss240_26h	A	]15:89850973]A	126.02	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-121,asm240-762;BEIDH=0,0;BEIDL=2,168;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-7,8;CQ=126.02;EVENT=gridss240_26;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_26o;RAS=1;RASQ=63.01;REF=375;REFPAIR=33;RP=3;RPQ=63.01;SC=1X14N1X187M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.02:63.01:375:33:3:63.01:0:0.00:3
15	89860293	gridss240_32o	C	C[15:89860362[	146.74	LOW_QUAL	AS=1;ASQ=62.66;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-143,asm240-776;BEIDH=2,184;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-12,13;CQ=146.74;EVENT=gridss240_32;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_32h;RAS=1;RASQ=0.00;REF=125;REFPAIR=13;RP=4;RPQ=84.07;SC=242M1X64N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.66:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.74:0.00:125:13:4:84.07:0:0.00:4
15	89860362	gridss240_32h	T	]15:89860293]T	146.74	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-143,asm240-776;BEIDH=0,0;BEIDL=2,184;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-32,33;CQ=146.74;EVENT=gridss240_32;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_32o;RAS=1;RASQ=62.66;REF=245;REFPAIR=19;RP=4;RPQ=84.07;SB=1.0;SC=1X24N1X166M15D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:146.74:62.66:245:19:4:84.07:0:0.00:4
15	91289816	gridss240_142o	A	]15:91289945]A	188.12	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=8;ASSR=0;BA=0;BANRP=1;BANRPQ=20.84;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-223;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-30,30;CIRPOS=-30,30;CQ=167.28;EVENT=gridss240_142;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_142h;RAS=1;RASQ=167.28;REF=410;REFPAIR=33;RP=1;RPQ=20.84;SC=1X59N1X453M;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:8:0:1:20.84:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:188.12:167.28:410:33:1:20.84:0:0.00:8
15	91289945	gridss240_142h	T	T[15:91289816[	188.12	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=167.28;ASRP=8;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-223;BEIDH=2;BEIDL=0;BQ=39.52;BSC=2;BSCQ=39.52;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-30,30;CIRPOS=-30,30;CQ=167.28;EVENT=gridss240_142;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_142o;RAS=0;RASQ=0.00;REF=495;REFPAIR=45;RP=1;RPQ=20.84;SB=0.5;SC=101M146D1X59N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:167.28:8:0:0:0.00:0:0.00:0.00:0:0:39.52:2:39.52:0:0.00:2:0.00:0:0.00:188.12:0.00:495:45:1:20.84:0:0.00:8
15	91289945	gridss240_44o	T	T[15:91290001[	84.05	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=4;BANRPQ=84.05;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-843;BEIDH=444;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-30,30;CIRPOS=-9,9;CQ=104.89;EVENT=gridss240_44;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_44h;RAS=1;RASQ=0.00;REF=495;REFPAIR=45;RP=4;RPQ=84.05;SC=409M1X59N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:4:84.05:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.05:0.00:495:45:4:84.05:0:0.00:4
15	91290001	gridss240_44h	G	]15:91289945]G	84.05	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-843;BEIDH=0;BEIDL=444;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-30,30;CQ=104.89;EVENT=gridss240_44;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_44o;RAS=0;RASQ=0.00;REF=565;REFPAIR=65;RP=4;RPQ=84.05;SC=1X17N1X53D236M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.05:0.00:565:65:4:84.05:0:0.00:4
15	91290468	gridss240_918b	A	.TTAGTTATGTGAAAATTTTTTTTTTAAATGGTTCCTAATTTAAAAATAAAAAAACGTCTTTTAAA	601.53	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=160.48;BASRP=0;BASSR=7;BEID=asm240-829;BEIDH=-1;BEIDL=64;BQ=601.53;BSC=18;BSCQ=441.06;BUM=0;BUMQ=0.00;BVF=18;CAS=0;CASQ=0.00;CQ=384.24;EVENT=gridss240_918;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=71;REFPAIR=22;RP=0;RPQ=0.00;SB=0.074074075;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:160.48:0:7:601.53:18:441.06:0:0.00:18:0.00:0:0.00:0.00:0.00:71:22:0:0.00:0:0.00:0
15	91290492	gridss240_355b	A	ACACTACATCTGCCACAATCCATAAAATCAAATTCCTATAATCAAATAACCTCATAGCTCCTAAGAAAA.	818.24	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=172.11;BASRP=0;BASSR=7;BEID=asm240-192;BEIDH=-1;BEIDL=0;BQ=818.24;BSC=26;BSCQ=646.13;BUM=0;BUMQ=0.00;BVF=26;CAS=0;CASQ=0.00;CQ=351.00;EVENT=gridss240_355;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=90;REFPAIR=18;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:172.11:0:7:818.24:26:646.13:0:0.00:26:0.00:0:0.00:0.00:0.00:90:18:0:0.00:0:0.00:0
15	91301955	gridss240_60o	T	T[15:91302028[	145.60	LOW_QUAL	AS=1;ASQ=62.10;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-307,asm240-899;BEIDH=2,264;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-8,8;CQ=145.60;EVENT=gridss240_60;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_60h;RAS=1;RASQ=0.00;REF=419;REFPAIR=21;RP=4;RPQ=83.50;SC=263M1X43N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.10:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:145.60:0.00:419:21:4:83.50:0:0.00:4
15	91302028	gridss240_60h	A	]15:91301955]A	145.60	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-307,asm240-899;BEIDH=0,0;BEIDL=2,264;BQ=21.65;BSC=1;BSCQ=21.65;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-22,22;CQ=145.60;EVENT=gridss240_60;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_60o;RAS=1;RASQ=62.10;REF=423;REFPAIR=25;RP=4;RPQ=83.50;SB=1.0;SC=1X15N1X162M28D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:21.65:1:21.65:0:0.00:1:0.00:0:0.00:145.60:62.10:423:25:4:83.50:0:0.00:4
15	91304245	gridss240_65o	C	C[15:91304347[	127.55	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.77;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-309;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-14,14;CQ=127.55;EVENT=gridss240_65;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_65h;RAS=0;RASQ=0.00;REF=379;REFPAIR=32;RP=3;RPQ=63.77;SC=113M66D100M1X27N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.77:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.55:0.00:379:32:3:63.77:0:0.00:3
15	91304347	gridss240_65h	G	]15:91304245]G	127.55	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=20.95;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-309;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-14,14;CQ=127.55;EVENT=gridss240_65;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_65o;RAS=1;RASQ=63.77;REF=339;REFPAIR=27;RP=3;RPQ=63.77;SC=1X27N1X219M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:20.95:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.55:63.77:339:27:3:63.77:0:0.00:3
15	91304369	gridss240_66o	A	A[15:91304565[	84.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-916;BEIDH=162;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-5,5;CQ=84.17;EVENT=gridss240_66;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_66h;RAS=1;RASQ=0.00;REF=301;REFPAIR=24;RP=4;RPQ=84.17;SC=162M5D124M1X15N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.17:0.00:301:24:4:84.17:0:0.00:4
15	91304565	gridss240_66h	A	]15:91304369]A	84.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-916;BEIDH=0;BEIDL=162;BQ=20.53;BSC=1;BSCQ=20.53;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-8,8;CQ=84.17;EVENT=gridss240_66;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_66o;RAS=0;RASQ=0.00;REF=165;REFPAIR=13;RP=4;RPQ=84.17;SB=1.0;SC=1X9N1X103M64D130M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.53:1:20.53:0:0.00:1:0.00:0:0.00:84.17:0.00:165:13:4:84.17:0:0.00:4
15	91304764	gridss240_68o	C	C[15:91304995[	128.36	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=64.18;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-306;BEIDH=2;BEIDL=0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-25,26;CIRPOS=-25,26;CQ=128.36;EVENT=gridss240_68;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_68h;RAS=0;RASQ=0.00;REF=369;REFPAIR=22;RP=3;RPQ=64.18;SB=0.0;SC=117M39D100M1X50N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.18:3:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:128.36:0.00:369:22:3:64.18:0:0.00:3
15	91304995	gridss240_68h	G	]15:91304764]G	128.36	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-306;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-25,26;CIRPOS=-25,26;CQ=128.36;EVENT=gridss240_68;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_68o;RAS=1;RASQ=64.18;REF=104;REFPAIR=6;RP=3;RPQ=64.18;SC=1X50N1X121M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:128.36:64.18:104:6:3:64.18:0:0.00:3
15	91318054	gridss240_500b	A	AAAAAAAGGTAAGGCCCAAGGAAAGGGGAAAAAAAAAAGGGGAAAGGGGGGAAAAAAAAG.	428.45	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=148.14;BASRP=0;BASSR=5;BEID=asm240-384;BEIDH=-1;BEIDL=0;BQ=428.45;BSC=10;BSCQ=280.31;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=296.28;EVENT=gridss240_500;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=36;REFPAIR=11;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:148.14:0:5:428.45:10:280.31:0:0.00:10:0.00:0:0.00:0.00:0.00:36:11:0:0.00:0:0.00:0
15	91341137	gridss240_104o	G	G[15:91341257[	85.15	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-1082;BEIDH=189;BEIDL=0;BQ=19.00;BSC=1;BSCQ=19.00;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-59,60;CIRPOS=-11,11;CQ=85.15;EVENT=gridss240_104;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_104h;RAS=1;RASQ=0.00;REF=209;REFPAIR=18;RP=4;RPQ=85.15;SB=0.0;SC=188M1X118N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.00:1:19.00:0:0.00:1:0.00:0:0.00:85.15:0.00:209:18:4:85.15:0:0.00:4
15	91341257	gridss240_104h	T	]15:91341137]T	85.15	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-1082;BEIDH=0;BEIDL=189;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-59,60;CQ=85.15;EVENT=gridss240_104;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_104o;RAS=0;RASQ=0.00;REF=341;REFPAIR=28;RP=4;RPQ=85.15;SC=1X21N1X285M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:85.15:0.00:341:28:4:85.15:0:0.00:4
15	91344397	gridss240_143o	A	]16:57307188]A	65.19	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=3;BANSRQ=65.19;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,17;CIRPOS=-17,0;CQ=65.19;EVENT=gridss240_143;HOMLEN=17;HOMSEQ=AAAAAAAAAAAAGTTGG;IC=0;IHOMPOS=-92,0;IQ=0.00;PARID=gridss240_143h;RAS=0;RASQ=0.00;REF=49;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X16N1X62M;SR=3;SRQ=65.19;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:3:65.19:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:65.19:0.00:49:0:0:0.00:3:65.19:3
15	91346730	gridss240_111o	C	C[15:91346785[	146.71	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.99;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-489;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-34,35;CQ=146.71;EVENT=gridss240_111;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_111h;RAS=0;RASQ=0.00;REF=485;REFPAIR=35;RP=4;RPQ=83.72;SC=290M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.99:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.71:0.00:485:35:4:83.72:0:0.00:4
15	91346785	gridss240_111h	T	]15:91346730]T	146.71	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-489;BEIDH=0;BEIDL=2;BQ=48.82;BSC=2;BSCQ=48.82;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-34,35;CIRPOS=-8,9;CQ=146.71;EVENT=gridss240_111;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_111o;RAS=1;RASQ=62.99;REF=425;REFPAIR=33;RP=4;RPQ=83.72;SB=0.5;SC=1X68N1X238M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:48.82:2:48.82:0:0.00:2:0.00:0:0.00:146.71:62.99:425:33:4:83.72:0:0.00:4
15	91352352	gridss240_117o	T	T[15:91352386[	62.73	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-29,29;CQ=62.73;EVENT=gridss240_117;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_117h;RAS=0;RASQ=0.00;REF=279;REFPAIR=28;RP=3;RPQ=62.73;SC=112M90D100M1X4N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.73:0.00:279:28:3:62.73:0:0.00:3
15	91352386	gridss240_117h	T	]15:91352352]T	62.73	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=43.79;BSC=2;BSCQ=43.79;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-2,3;CQ=62.73;EVENT=gridss240_117;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_117o;RAS=0;RASQ=0.00;REF=299;REFPAIR=26;RP=3;RPQ=62.73;SB=0.5;SC=1X57N1X249M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:43.79:2:43.79:0:0.00:1:0.00:0:0.00:62.73:0.00:299:26:3:62.73:0:0.00:3
15	91352550	gridss240_119o	C	C[15:91352680[	84.93	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-1168;BEIDH=132;BEIDL=0;BQ=28.87;BSC=1;BSCQ=28.87;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-27,27;CIRPOS=-35,36;CQ=84.93;EVENT=gridss240_119;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_119h;RAS=1;RASQ=0.00;REF=443;REFPAIR=29;RP=4;RPQ=84.93;SB=0.0;SC=253M1X53N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:28.87:1:28.87:0:0.00:1:0.00:0:0.00:84.93:0.00:443:29:4:84.93:0:0.00:4
15	91352680	gridss240_119h	T	]15:91352550]T	84.93	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-1168;BEIDH=0;BEIDL=132;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-27,27;CQ=84.93;EVENT=gridss240_119;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_119o;RAS=0;RASQ=0.00;REF=285;REFPAIR=18;RP=4;RPQ=84.93;SC=1X70N1X236M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.93:0.00:285:18:4:84.93:0:0.00:4
15	91353944	gridss240_125o	G	G[15:91354063[	168.62	LOW_QUAL	AS=1;ASQ=84.31;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-1166,asm240-556;BEIDH=155,2;BEIDL=0,0;BQ=23.56;BSC=1;BSCQ=23.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-23,23;CQ=168.62;EVENT=gridss240_125;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_125h;RAS=1;RASQ=0.00;REF=381;REFPAIR=31;RP=4;RPQ=84.31;SB=1.0;SC=101M6D154M1X45N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.31:4:0:0:0.00:0:0.00:0.00:0:0:23.56:1:23.56:0:0.00:1:0.00:0:0.00:168.62:0.00:381:31:4:84.31:0:0.00:4
15	91354063	gridss240_125h	T	]15:91353944]T	168.62	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-1166,asm240-556;BEIDH=0,0;BEIDL=155,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-23,23;CQ=168.62;EVENT=gridss240_125;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_125o;RAS=1;RASQ=84.31;REF=343;REFPAIR=30;RP=4;RPQ=84.31;SC=1X45N1X175M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:168.62:84.31:343:30:4:84.31:0:0.00:4
15	91357836	gridss240_138o	C	C[15:91357954[	127.33	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.66;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-600;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-12,13;CQ=127.33;EVENT=gridss240_138;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_138h;RAS=0;RASQ=0.00;REF=186;REFPAIR=21;RP=3;RPQ=63.66;SC=101M16D165M1X24N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.66:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.33:0.00:186:21:3:63.66:0:0.00:3
15	91357954	gridss240_138h	A	]15:91357836]A	127.33	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-600;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-12,13;CQ=127.33;EVENT=gridss240_138;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_138o;RAS=1;RASQ=63.66;REF=335;REFPAIR=16;RP=3;RPQ=63.66;SC=1X24N1X220M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.33:63.66:335:16:3:63.66:0:0.00:3
15	91358272	gridss240_1253b	G	.AGAGGAAG	151.04	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=75.52;BASRP=0;BASSR=4;BEID=asm240-1185;BEIDH=-1;BEIDL=7;BQ=151.04;BSC=4;BSCQ=75.52;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=151.04;EVENT=gridss240_1253;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=413;REFPAIR=21;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:75.52:0:4:151.04:4:75.52:0:0.00:4:0.00:0:0.00:0.00:0.00:413:21:0:0.00:0:0.00:0
15	91358275	gridss240_681b	G	GAAGGTCA.	115	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.50;BASRP=0;BASSR=3;BEID=asm240-580;BEIDH=-1;BEIDL=0;BQ=115.00;BSC=3;BSCQ=57.50;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=115.00;EVENT=gridss240_681;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=418;REFPAIR=24;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.50:0:3:115.00:3:57.50:0:0.00:3:0.00:0:0.00:0.00:0.00:418:24:0:0.00:0:0.00:0
16	2061980	gridss241_370b	A	.AAGAGTGTAACTCCATATCAA	120.48	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=40.32;BASRP=0;BASSR=2;BEID=asm241-324;BEIDH=-1;BEIDL=20;BQ=120.48;BSC=4;BSCQ=80.15;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=101.48;EVENT=gridss241_370;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=27;REFPAIR=0;RP=0;RPQ=0.00;SB=0.42857143;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:40.32:0:2:120.48:4:80.15:0:0.00:4:0.00:0:0.00:0.00:0.00:27:0:0:0.00:0:0.00:0
16	2062000	gridss241_90b	A	AAAAACAAAAAATTTTTTTAAAACACCAAAAAATTTTATATTCATAGTTTAAATTAAAAAT.	606.34	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=198.77;BASRP=0;BASSR=8;BEID=asm241-22;BEIDH=-1;BEIDL=0;BQ=606.34;BSC=16;BSCQ=407.57;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=478.55;EVENT=gridss241_90;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=45;REFPAIR=13;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:198.77:0:8:606.34:16:407.57:0:0.00:16:0.00:0:0.00:0.00:0.00:45:13:0:0.00:0:0.00:0
16	3639607	gridss241_22o	G	G[16:3639715[	125.57	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.79;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm241-146;BEIDH=2;BEIDL=0;BQ=19.97;BSC=1;BSCQ=19.97;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-28,29;CIRPOS=-28,29;CQ=125.57;EVENT=gridss241_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_22h;RAS=0;RASQ=0.00;REF=294;REFPAIR=18;RP=3;RPQ=62.79;SB=1.0;SC=253M1X56N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.79:3:0:0:0.00:0:0.00:0.00:0:0:19.97:1:19.97:0:0.00:1:0.00:0:0.00:125.57:0.00:294:18:3:62.79:0:0.00:3
16	3639715	gridss241_22h	A	]16:3639607]A	125.57	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm241-146;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-28,29;CIRPOS=-28,29;CQ=125.57;EVENT=gridss241_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_22o;RAS=1;RASQ=62.79;REF=362;REFPAIR=23;RP=3;RPQ=62.79;SC=1X56N1X240M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.57:62.79:362:23:3:62.79:0:0.00:3
16	3641324	gridss241_27o	A	A[16:3641419[	274.12	LOW_QUAL	AS=1;ASQ=126.75;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm241-145,asm241-433;BEIDH=2,323;BEIDL=0,0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-24,25;CIRPOS=-24,25;CQ=232.05;EVENT=gridss241_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_27h;RAS=1;RASQ=0.00;REF=397;REFPAIR=29;RP=7;RPQ=147.37;SB=0.0;SC=272M1X48N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:126.75:6:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:274.12:0.00:397:29:7:147.37:0:0.00:7
16	3641419	gridss241_27h	A	]16:3641324]A	274.12	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm241-145,asm241-433;BEIDH=0,0;BEIDL=2,323;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-24,25;CIRPOS=-24,25;CQ=232.05;EVENT=gridss241_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_27o;RAS=1;RASQ=126.75;REF=401;REFPAIR=24;RP=7;RPQ=147.37;SC=1X48N1X310M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:274.12:126.75:401:24:7:147.37:0:0.00:7
16	3647390	gridss241_42o	C	C[16:3647451[	63.22	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-35,35;CQ=63.22;EVENT=gridss241_42;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_42h;RAS=0;RASQ=0.00;REF=272;REFPAIR=24;RP=3;RPQ=63.22;SC=101M73D128M1X4N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.22:0.00:272:24:3:63.22:0:0.00:3
16	3647451	gridss241_42h	C	]16:3647390]C	63.22	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=108.12;BSC=5;BSCQ=108.12;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-2,3;CQ=63.22;EVENT=gridss241_42;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_42o;RAS=0;RASQ=0.00;REF=312;REFPAIR=16;RP=3;RPQ=63.22;SB=0.6;SC=1X69N1X100M33D104M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:108.12:5:108.12:0:0.00:5:0.00:0:0.00:63.22:0.00:312:16:3:63.22:0:0.00:3
16	3648854	gridss241_47o	G	G[16:3648952[	63.79	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-8,8;CQ=63.79;EVENT=gridss241_47;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_47h;RAS=0;RASQ=0.00;REF=278;REFPAIR=29;RP=3;RPQ=63.79;SC=138M17D100M1X51N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.79:0.00:278:29:3:63.79:0:0.00:3
16	3648952	gridss241_47h	C	]16:3648854]C	63.79	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-26,26;CQ=63.79;EVENT=gridss241_47;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_47o;RAS=0;RASQ=0.00;REF=575;REFPAIR=46;RP=3;RPQ=63.79;SC=1X15N1X100M82D109M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.79:0.00:575:46:3:63.79:0:0.00:3
16	3652485	gridss241_51o	A	A[16:3652644[	127.26	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.63;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm241-247;BEIDH=2;BEIDL=0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=127.26;EVENT=gridss241_51;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_51h;RAS=0;RASQ=0.00;REF=159;REFPAIR=4;RP=3;RPQ=63.63;SB=0.0;SC=101M78D118M1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.63:3:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:127.26:0.00:159:4:3:63.63:0:0.00:3
16	3652644	gridss241_51h	C	]16:3652485]C	127.26	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm241-247;BEIDH=0;BEIDL=2;BQ=19.00;BSC=1;BSCQ=19.00;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=127.26;EVENT=gridss241_51;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_51o;RAS=1;RASQ=63.63;REF=105;REFPAIR=5;RP=3;RPQ=63.63;SB=1.0;SC=1X9N1X197M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:19.00:1:19.00:0:0.00:1:0.00:0:0.00:127.26:63.63:105:5:3:63.63:0:0.00:3
16	3660131	gridss241_60o	G	G[16:3660169[	83.30	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm241-600;BEIDH=158;BEIDL=0;BQ=43.84;BSC=2;BSCQ=43.84;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-6,6;CQ=83.30;EVENT=gridss241_60;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_60h;RAS=1;RASQ=0.00;REF=516;REFPAIR=36;RP=4;RPQ=83.30;SB=0.0;SC=98M30D157M1X21N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:43.84:2:43.84:0:0.00:2:0.00:0:0.00:83.30:0.00:516:36:4:83.30:0:0.00:4
16	3660169	gridss241_60h	G	]16:3660131]G	83.30	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm241-600;BEIDH=0;BEIDL=158;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-11,11;CQ=83.30;EVENT=gridss241_60;IC=0;IMPRECISE;IQ=0.00;PARID=gridss241_60o;RAS=0;RASQ=0.00;REF=561;REFPAIR=48;RP=4;RPQ=83.30;SC=1X11N1X100M7D188M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:83.30:0.00:561:48:4:83.30:0:0.00:4
16	14029340	gridss242_7o	A	A[16:14029430[	63.12	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,15;CIRPOS=-39,40;CQ=63.12;EVENT=gridss242_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_7h;RAS=0;RASQ=0.00;REF=143;REFPAIR=8;RP=3;RPQ=63.12;SB=0.0;SC=101M72D104M1X29N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:63.12:0.00:143:8:3:63.12:0:0.00:3
16	14029430	gridss242_7h	G	]16:14029340]G	63.12	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=41.37;BSC=2;BSCQ=41.37;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-39,40;CIRPOS=-15,15;CQ=63.12;EVENT=gridss242_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_7o;RAS=0;RASQ=0.00;REF=229;REFPAIR=15;RP=3;RPQ=63.12;SB=1.0;SC=1X78N1X228M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:41.37:2:41.37:0:0.00:2:0.00:0:0.00:63.12:0.00:229:15:3:63.12:0:0.00:3
16	14043569	gridss242_20o	T	T[16:14043610[	62.21	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-11,11;CQ=62.21;EVENT=gridss242_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_20h;RAS=0;RASQ=0.00;REF=116;REFPAIR=6;RP=3;RPQ=62.21;SC=101M38D141M1X26N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.21:0.00:116:6:3:62.21:0:0.00:3
16	14043610	gridss242_20h	A	]16:14043569]A	62.21	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-13,14;CQ=62.21;EVENT=gridss242_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_20o;RAS=0;RASQ=0.00;REF=120;REFPAIR=16;RP=3;RPQ=62.21;SC=1X21N1X100M10D175M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.21:0.00:120:16:3:62.21:0:0.00:3
16	14044779	gridss242_114b	C	CATGGCTC.	301.76	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=150.88;BASRP=0;BASSR=8;BEID=asm242-60;BEIDH=-1;BEIDL=0;BQ=301.76;BSC=8;BSCQ=150.88;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=301.76;EVENT=gridss242_114;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=213;REFPAIR=28;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:150.88:0:8:301.76:8:150.88:0:0.00:7:0.00:0:0.00:0.00:0.00:213:28:0:0.00:0:0.00:0
16	14045654	gridss242_27o	T	T[16:14045825[	125.80	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.90;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm242-95;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-22,22;CQ=105.13;EVENT=gridss242_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_27h;RAS=0;RASQ=0.00;REF=431;REFPAIR=22;RP=3;RPQ=62.90;SC=101M62D100M1X43N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.90:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.80:0.00:431:22:3:62.90:0:0.00:3
16	14045825	gridss242_27h	T	]16:14045654]T	125.80	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=62.90;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm242-95;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-22,22;CQ=105.13;EVENT=gridss242_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_27o;RAS=1;RASQ=62.90;REF=383;REFPAIR=24;RP=3;RPQ=62.90;SC=1X43N1X171M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:3:62.90:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.80:62.90:383:24:3:62.90:0:0.00:3
16	14045849	gridss242_30o	C	C[16:14045992[	127.40	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.70;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm242-98;BEIDH=2;BEIDL=0;BQ=73.72;BSC=3;BSCQ=73.72;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-34,35;CIRPOS=-34,35;CQ=127.40;EVENT=gridss242_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_30h;RAS=0;RASQ=0.00;REF=383;REFPAIR=24;RP=3;RPQ=63.70;SB=0.0;SC=238M1X68N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.70:3:0:0:0.00:0:0.00:0.00:0:0:73.72:3:73.72:0:0.00:3:0.00:0:0.00:127.40:0.00:383:24:3:63.70:0:0.00:3
16	14045992	gridss242_30h	A	]16:14045849]A	127.40	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm242-98;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-34,35;CIRPOS=-34,35;CQ=127.40;EVENT=gridss242_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_30o;RAS=1;RASQ=63.70;REF=114;REFPAIR=7;RP=3;RPQ=63.70;SC=1X68N1X187M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.82:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.40:63.70:114:7:3:63.70:0:0.00:3
16	23614426	gridss243_1o	T	T[16:23614527[	85.63	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-9,9;CQ=64.23;EVENT=gridss243_1;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_1h;RAS=0;RASQ=0.00;REF=185;REFPAIR=17;RP=4;RPQ=85.63;SC=194M1D100M1X11N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:85.63:0.00:185:17:4:85.63:0:0.00:4
16	23614527	gridss243_1h	A	]16:23614426]A	85.63	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-6,6;CQ=64.23;EVENT=gridss243_1;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_1o;RAS=0;RASQ=0.00;REF=159;REFPAIR=14;RP=4;RPQ=85.63;SB=1.0;SC=1X17N1X100M45D150M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:85.63:0.00:159:14:4:85.63:0:0.00:4
16	23627696	gridss243_11o	A	A[16:23627829[	63.63	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm243-269;BEIDH=159;BEIDL=0;BQ=64.14;BSC=3;BSCQ=64.14;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-74,75;CIRPOS=-25,26;CQ=63.63;EVENT=gridss243_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_11h;RAS=1;RASQ=0.00;REF=266;REFPAIR=13;RP=3;RPQ=63.63;SB=0.33333334;SC=158M1X148N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:21.41:0:0.00:0.00:0:0:64.14:3:64.14:0:0.00:3:0.00:0:0.00:63.63:0.00:266:13:3:63.63:0:0.00:3
16	23627829	gridss243_11h	T	]16:23627696]T	63.63	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm243-269;BEIDH=0;BEIDL=159;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-25,26;CIRPOS=-74,75;CQ=63.63;EVENT=gridss243_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_11o;RAS=0;RASQ=0.00;REF=268;REFPAIR=17;RP=3;RPQ=63.63;SB=1.0;SC=1X50N1X149M6D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:63.63:0.00:268:17:3:63.63:0:0.00:3
16	23634242	gridss243_15o	A	A[16:23634372[	126.63	LOW_QUAL	AS=1;ASQ=63.31;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm243-310,asm243-95;BEIDH=156,2;BEIDL=0,0;BQ=39.07;BSC=2;BSCQ=39.07;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-48,48;CIRPOS=-48,48;CQ=126.63;EVENT=gridss243_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_15h;RAS=1;RASQ=0.00;REF=509;REFPAIR=27;RP=3;RPQ=63.31;SB=0.0;SC=211M1X95N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.31:3:0:0:0.00:0:0.00:0.00:0:0:39.07:2:39.07:0:0.00:2:0.00:0:0.00:126.63:0.00:509:27:3:63.31:0:0.00:3
16	23634372	gridss243_15h	G	]16:23634242]G	126.63	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm243-310,asm243-95;BEIDH=0,0;BEIDL=156,2;BQ=37.84;BSC=2;BSCQ=37.84;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-48,48;CIRPOS=-48,48;CQ=126.63;EVENT=gridss243_15;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_15o;RAS=1;RASQ=63.31;REF=298;REFPAIR=20;RP=3;RPQ=63.31;SB=0.0;SC=1X95N1X104M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:37.84:2:37.84:0:0.00:2:0.00:0:0.00:126.63:63.31:298:20:3:63.31:0:0.00:3
16	23634523	gridss243_347b	T	.ACAAAAAAAAAAAAAAAAGGGGGTGATGTGAGGAAAAATTTTTTAATAGAAGAGGAGGGTTTTCT	451.78	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=44.00;BASRP=0;BASSR=2;BEID=asm243-279;BEIDH=-1;BEIDL=64;BQ=451.78;BSC=15;BSCQ=407.78;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=150.10;EVENT=gridss243_347;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=56;REFPAIR=17;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:44.00:0:2:451.78:15:407.78:0:0.00:15:0.00:0:0.00:0.00:0.00:56:17:0:0.00:0:0.00:0
16	23635355	gridss243_17o	C	C[16:23635521[	186.62	LOW_QUAL	AS=1;ASQ=82.99;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm243-309,asm243-94;BEIDH=170,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-22,22;CQ=165.99;EVENT=gridss243_17;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_17h;RAS=1;RASQ=0.00;REF=468;REFPAIR=27;RP=5;RPQ=103.63;SC=120M1D142M1X43N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:82.99:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:186.62:0.00:468:27:5:103.63:0:0.00:5
16	23635521	gridss243_17h	A	]16:23635355]A	186.62	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm243-309,asm243-94;BEIDH=0,0;BEIDL=170,2;BQ=24.06;BSC=1;BSCQ=24.06;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-22,22;CQ=165.99;EVENT=gridss243_17;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_17o;RAS=1;RASQ=82.99;REF=136;REFPAIR=9;RP=5;RPQ=103.63;SB=1.0;SC=1X43N1X153M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:24.06:1:24.06:0:0.00:1:0.00:0:0.00:186.62:82.99:136:9:5:103.63:0:0.00:5
16	23641776	gridss243_26o	G	G[16:23641813[	62.16	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-7,8;CQ=62.40;EVENT=gridss243_26;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_26h;RAS=0;RASQ=0.00;REF=169;REFPAIR=23;RP=3;RPQ=62.16;SC=161M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.16:0.00:169:23:3:62.16:0:0.00:3
16	23641813	gridss243_26h	A	]16:23641776]A	62.16	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=0,1;CQ=62.40;EVENT=gridss243_26;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_26o;RAS=0;RASQ=0.00;REF=135;REFPAIR=13;RP=3;RPQ=62.16;SC=1X14N1X124D178M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.16:0.00:135:13:3:62.16:0:0.00:3
16	23646972	gridss243_31o	A	A[16:23647031[	394.70	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=228.68;ASRP=11;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm243-159;BEIDH=2;BEIDL=0;BQ=20.23;BSC=1;BSCQ=20.23;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-30,31;CIRPOS=-1,1;CQ=394.70;EVENT=gridss243_31;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_31h;RAS=0;RASQ=0.00;REF=642;REFPAIR=41;RP=8;RPQ=166.02;SB=1.0;SC=246M1X60N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=11	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:228.68:11:0:0:0.00:0:0.00:0.00:0:0:20.23:1:20.23:0:0.00:1:0.00:0:0.00:394.70:0.00:642:41:8:166.02:0:0.00:11
16	23647031	gridss243_31h	T	]16:23646972]T	394.70	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=11;ASSR=0;BA=0;BANRP=7;BANRPQ=145.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm243-159;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-30,31;CQ=394.70;EVENT=gridss243_31;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_31o;RAS=1;RASQ=228.68;REF=577;REFPAIR=45;RP=8;RPQ=166.02;SC=1X1N1X411M;SR=0;SRQ=0.00;SVTYPE=BND;VF=11	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:11:0:7:145.82:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:394.70:228.68:577:45:8:166.02:0:0.00:11
16	89804442	gridss250_2o	A	A[16:89804539[	62.74	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=132.95;BSC=6;BSCQ=132.95;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CIPOS=-63,64;CIRPOS=-3,3;CQ=62.74;EVENT=gridss250_2;IC=0;IMPRECISE;IQ=0.00;PARID=gridss250_2h;RAS=0;RASQ=0.00;REF=413;REFPAIR=21;RP=3;RPQ=62.74;SB=0.33333334;SC=137M1D42M1X126N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:132.95:6:132.95:0:0.00:6:0.00:0:0.00:62.74:0.00:413:21:3:62.74:0:0.00:3
16	89804539	gridss250_2h	A	]16:89804442]A	62.74	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-63,64;CQ=62.74;EVENT=gridss250_2;IC=0;IMPRECISE;IQ=0.00;PARID=gridss250_2o;RAS=0;RASQ=0.00;REF=434;REFPAIR=26;RP=3;RPQ=62.74;SC=1X5N1X158M42D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.74:0.00:434:26:3:62.74:0:0.00:3
16	89828794	gridss250_122b	G	GCAACATGGTGACACCC.	120.19	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=60.10;BASRP=0;BASSR=3;BEID=asm250-82;BEIDH=-1;BEIDL=0;BQ=120.19;BSC=3;BSCQ=60.10;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=120.19;EVENT=gridss250_122;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=24;REFPAIR=1;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:60.10:0:3:120.19:3:60.10:0:0.00:3:0.00:0:0.00:0.00:0.00:24:1:0:0.00:0:0.00:0
16	89835325	gridss250_144b	T	TGTTTGGGGCCT.	154.89	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=77.45;BASRP=0;BASSR=4;BEID=asm250-109;BEIDH=-1;BEIDL=0;BQ=154.89;BSC=4;BSCQ=77.45;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=154.89;EVENT=gridss250_144;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=120;REFPAIR=9;RP=0;RPQ=0.00;SB=0.25;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:77.45:0:4:154.89:4:77.45:0:0.00:4:0.00:0:0.00:0.00:0.00:120:9:0:0.00:0:0.00:0
16	89857430	gridss250_419b	T	.TTGTTTTTTTTTTTT	488.24	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=264.28;BASRP=0;BASSR=12;BEID=asm250-394,asm250-395;BEIDH=-1,-1;BEIDL=26,14;BQ=488.24;BSC=11;BSCQ=223.96;BUM=0;BUMQ=0.00;BVF=13;CAS=0;CASQ=0.00;CQ=228.10;EVENT=gridss250_419;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=130;REFPAIR=11;RP=0;RPQ=0.00;SB=0.04347826;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:264.28:0:12:488.24:11:223.96:0:0.00:13:0.00:0:0.00:0.00:0.00:130:11:0:0.00:0:0.00:0
16	89857458	gridss250_190b	G	GGGGAGGGGGGTTTTCTTTGGGGTTTCAGGGTTGGTTTCGCATATTTTTTTAAAAAAAAACACCG.	1468.02	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=308.56;BASRP=0;BASSR=13;BEID=asm250-152;BEIDH=-1;BEIDL=0;BQ=1468.02;BSC=47;BSCQ=1159.46;BUM=0;BUMQ=0.00;BVF=47;CAS=0;CASQ=0.00;CQ=660.76;EVENT=gridss250_190;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=175;REFPAIR=31;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:308.56:0:13:1468.02:47:1159.46:0:0.00:47:0.00:0:0.00:0.00:0.00:175:31:0:0.00:0:0.00:0
16	89857890	gridss250_22o	A	A[16:89858004[	62.43	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm250-416;BEIDH=135;BEIDL=0;BQ=88.24;BSC=4;BSCQ=88.24;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-68,68;CIRPOS=-32,33;CQ=62.43;EVENT=gridss250_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss250_22h;RAS=1;RASQ=0.00;REF=450;REFPAIR=36;RP=3;RPQ=62.43;SB=0.25;SC=171M1X135N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:88.24:4:88.24:0:0.00:4:0.00:0:0.00:62.43:0.00:450:36:3:62.43:0:0.00:3
16	89858004	gridss250_22h	T	]16:89857890]T	62.43	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm250-416;BEIDH=0;BEIDL=135;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-68,68;CQ=62.43;EVENT=gridss250_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss250_22o;RAS=0;RASQ=0.00;REF=476;REFPAIR=38;RP=3;RPQ=62.43;SC=1X64N1X100M41D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.43:0.00:476:38:3:62.43:0:0.00:3
17	7500822	gridss251_41b	T	TTTGGGTGGG.	175.98	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.55;BASRP=0;BASSR=3;BEID=asm251-14;BEIDH=-1;BEIDL=0;BQ=175.98;BSC=6;BSCQ=118.43;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=156.67;EVENT=gridss251_41;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=127;REFPAIR=5;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.55:0:3:175.98:6:118.43:0:0.00:6:0.00:0:0.00:0.00:0.00:127:5:0:0.00:0:0.00:0
17	7549646	gridss251_266b	T	.CCAAGT	186.75	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=93.38;BASRP=0;BASSR=5;BEID=asm251-239;BEIDH=-1;BEIDL=5;BQ=186.75;BSC=5;BSCQ=93.38;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=186.75;EVENT=gridss251_266;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=267;REFPAIR=15;RP=0;RPQ=0.00;SB=0.6;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:93.38:0:5:186.75:5:93.38:0:0.00:4:0.00:0:0.00:0.00:0.00:267:15:0:0.00:0:0.00:0
17	7582154	gridss251_138b	T	TTTAGCATGTTCTCTTTTTTTGTGTTAAATTCTTTATCTTATTTGTTAAAAATGTTTCAT.	643.30	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=203.83;BASRP=0;BASSR=8;BEID=asm251-119,asm251-83;BEIDH=-1,-1;BEIDL=0,0;BQ=643.30;BSC=17;BSCQ=439.46;BUM=0;BUMQ=0.00;BVF=17;CAS=0;CASQ=0.00;CQ=435.72;EVENT=gridss251_138;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=311;REFPAIR=12;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:203.83:0:8:643.30:17:439.46:0:0.00:17:0.00:0:0.00:0.00:0.00:311:12:0:0.00:0:0.00:0
17	7582233	gridss251_377b	C	.TTTTTTTTATGTTTTTGTTTCTC	571.06	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=61.39;BASRP=0;BASSR=3;BEID=asm251-316;BEIDH=-1;BEIDL=22;BQ=571.06;BSC=22;BSCQ=509.67;BUM=0;BUMQ=0.00;BVF=22;CAS=0;CASQ=0.00;CQ=236.44;EVENT=gridss251_377;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=238;REFPAIR=29;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:61.39:0:3:571.06:22:509.67:0:0.00:22:0.00:0:0.00:0.00:0.00:238:29:0:0.00:0:0.00:0
17	7583532	gridss251_158b	A	ACAAGTAC.	208.03	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=94.36;BASRP=0;BASSR=5;BEID=asm251-128;BEIDH=-1;BEIDL=0;BQ=208.03;BSC=6;BSCQ=113.67;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=188.72;EVENT=gridss251_158;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=109;REFPAIR=13;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:94.36:0:5:208.03:6:113.67:0:0.00:6:0.00:0:0.00:0.00:0.00:109:13:0:0.00:0:0.00:0
17	12097249	gridss251_242b	T	TCTTGATT.	266.69	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=133.34;BASRP=0;BASSR=7;BEID=asm251-210;BEIDH=-1;BEIDL=0;BQ=266.69;BSC=7;BSCQ=133.34;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=266.69;EVENT=gridss251_242;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=78;REFPAIR=7;RP=0;RPQ=0.00;SB=0.42857143;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:133.34:0:7:266.69:7:133.34:0:0.00:7:0.00:0:0.00:0.00:0.00:78:7:0:0.00:0:0.00:0
17	29564675	gridss253_186b	T	.AAACCCTTTTTATTTTCTGTCTTTTTTCACTTTTTGTTTTTTTTTTTCCCACTTTCCCTTGTTTTTTT	546.48	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=233.48;BASRP=0;BASSR=9;BEID=asm253-152;BEIDH=-1;BEIDL=67;BQ=546.48;BSC=11;BSCQ=313.00;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=441.65;EVENT=gridss253_186;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=25;REFPAIR=11;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:233.48:0:9:546.48:11:313.00:0:0.00:12:0.00:0:0.00:0.00:0.00:25:11:0:0.00:0:0.00:0
17	33426962	gridss253_4o	A	A[17:33427048[	84.25	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=56.04;BSC=2;BSCQ=56.04;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-36,37;CQ=84.25;EVENT=gridss253_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss253_4h;RAS=0;RASQ=0.00;REF=424;REFPAIR=37;RP=4;RPQ=84.25;SB=1.0;SC=288M1X18N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:56.04:2:56.04:0:0.00:2:0.00:0:0.00:84.25:0.00:424:37:4:84.25:0:0.00:4
17	33427048	gridss253_4h	C	]17:33426962]C	84.25	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-36,37;CIRPOS=-9,10;CQ=84.25;EVENT=gridss253_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss253_4o;RAS=0;RASQ=0.00;REF=375;REFPAIR=32;RP=4;RPQ=84.25;SB=0.0;SC=1X72N1X101M26D107M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:84.25:0.00:375:32:4:84.25:0:0.00:4
17	33427597	gridss253_8o	G	G[17:33427736[	126.83	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm253-69;BEIDH=2;BEIDL=0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-65,66;CIRPOS=-26,26;CQ=126.83;EVENT=gridss253_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss253_8h;RAS=0;RASQ=0.00;REF=176;REFPAIR=12;RP=3;RPQ=63.83;SB=0.0;SC=176M1X130N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.00:3:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:126.83:0.00:176:12:3:63.83:0:0.00:4
17	33427736	gridss253_8h	G	]17:33427597]G	126.83	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm253-69;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-65,66;CQ=126.83;EVENT=gridss253_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss253_8o;RAS=1;RASQ=63.00;REF=443;REFPAIR=26;RP=3;RPQ=63.83;SC=1X51N1X248M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.83:63.00:443:26:3:63.83:0:0.00:4
17	33427913	gridss253_11o	G	G[17:33427981[	63.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-15,16;CQ=84.45;EVENT=gridss253_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss253_11h;RAS=0;RASQ=0.00;REF=401;REFPAIR=28;RP=3;RPQ=63.32;SC=166M136D1X4N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.32:0.00:401:28:3:63.32:0:0.00:3
17	33427981	gridss253_11h	A	]17:33427913]A	63.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-2,3;CQ=84.45;EVENT=gridss253_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss253_11o;RAS=0;RASQ=0.00;REF=395;REFPAIR=35;RP=3;RPQ=63.32;SC=1X30N1X239M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:2:42.82:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.32:0.00:395:35:3:63.32:0:0.00:3
17	37618451	gridss254_3o	A	A[17:37618578[	126.99	LOW_QUAL	AS=1;ASQ=63.49;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-17,asm254-816;BEIDH=2,172;BEIDL=0,0;BQ=40.45;BSC=2;BSCQ=40.45;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-17,17;CQ=126.99;EVENT=gridss254_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_3h;RAS=1;RASQ=0.00;REF=487;REFPAIR=39;RP=3;RPQ=63.49;SB=0.0;SC=101M33D139M1X33N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.49:3:0:0:0.00:0:0.00:0.00:0:0:40.45:2:40.45:0:0.00:2:0.00:0:0.00:126.99:0.00:487:39:3:63.49:0:0.00:3
17	37618578	gridss254_3h	A	]17:37618451]A	126.99	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-17,asm254-816;BEIDH=0,0;BEIDL=2,172;BQ=19.31;BSC=1;BSCQ=19.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-17,17;CQ=126.99;EVENT=gridss254_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_3o;RAS=1;RASQ=63.49;REF=634;REFPAIR=54;RP=3;RPQ=63.49;SB=1.0;SC=1X33N1X193M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:19.31:1:19.31:0:0.00:1:0.00:0:0.00:126.99:63.49:634:54:3:63.49:0:0.00:3
17	37686444	gridss254_12o	T	T[17:37686527[	63.83	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=97.93;BSC=4;BSCQ=97.93;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-45,45;CIRPOS=-15,16;CQ=63.83;EVENT=gridss254_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_12h;RAS=0;RASQ=0.00;REF=410;REFPAIR=17;RP=3;RPQ=63.83;SB=0.5;SC=217M1X89N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:97.93:4:97.93:0:0.00:4:0.00:0:0.00:63.83:0.00:410:17:3:63.83:0:0.00:3
17	37686527	gridss254_12h	A	]17:37686444]A	63.83	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-45,45;CQ=63.83;EVENT=gridss254_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_12o;RAS=0;RASQ=0.00;REF=336;REFPAIR=25;RP=3;RPQ=63.83;SC=1X30N1X100M45D131M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.83:0.00:336:25:3:63.83:0:0.00:3
17	41201458	gridss254_42o	T	T[17:41201547[	63.37	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1118;BEIDH=232;BEIDL=0;BQ=58.77;BSC=3;BSCQ=58.77;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-43,43;CIRPOS=-13,14;CQ=63.37;EVENT=gridss254_42;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_42h;RAS=1;RASQ=0.00;REF=157;REFPAIR=8;RP=3;RPQ=63.37;SB=0.33333334;SC=231M1X85N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:58.77:3:58.77:0:0.00:3:0.00:0:0.00:63.37:0.00:157:8:3:63.37:0:0.00:3
17	41201547	gridss254_42h	A	]17:41201458]A	63.37	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1118;BEIDH=0;BEIDL=232;BQ=40.60;BSC=2;BSCQ=40.60;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-43,43;CQ=63.37;EVENT=gridss254_42;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_42o;RAS=0;RASQ=0.00;REF=120;REFPAIR=3;RP=3;RPQ=63.37;SB=0.5;SC=1X26N1X132M47D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:40.60:2:40.60:0:0.00:1:0.00:0:0.00:63.37:0.00:120:3:3:63.37:0:0.00:3
17	41202089	gridss254_46o	G	G[17:41202134[	146.41	LOW_QUAL	AS=1;ASQ=62.69;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1115,asm254-325;BEIDH=172,2;BEIDL=0,0;BQ=27.36;BSC=1;BSCQ=27.36;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-12,12;CIRPOS=-14,14;CQ=146.41;EVENT=gridss254_46;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_46h;RAS=1;RASQ=0.00;REF=361;REFPAIR=35;RP=4;RPQ=83.72;SB=1.0;SC=101M11D171M1X23N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.69:3:0:0:0.00:0:0.00:0.00:0:0:27.36:1:27.36:0:0.00:1:0.00:0:0.00:146.41:0.00:361:35:4:83.72:0:0.00:4
17	41202134	gridss254_46h	C	]17:41202089]C	146.41	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1115,asm254-325;BEIDH=0,0;BEIDL=172,2;BQ=26.25;BSC=1;BSCQ=26.25;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-12,12;CQ=146.41;EVENT=gridss254_46;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_46o;RAS=1;RASQ=62.69;REF=477;REFPAIR=32;RP=4;RPQ=83.72;SB=1.0;SC=1X27N1X100M7D152M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:26.25:1:26.25:0:0.00:1:0.00:0:0.00:146.41:62.69:477:32:4:83.72:0:0.00:4
17	41215575	gridss254_54o	T	T[17:41215672[	63.21	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.31;BSC=1;BSCQ=19.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-25,26;CIRPOS=-34,34;CQ=63.21;EVENT=gridss254_54;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_54h;RAS=0;RASQ=0.00;REF=393;REFPAIR=33;RP=3;RPQ=63.21;SB=0.0;SC=256M1X50N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.31:1:19.31:0:0.00:1:0.00:0:0.00:63.21:0.00:393:33:3:63.21:0:0.00:3
17	41215672	gridss254_54h	A	]17:41215575]A	63.21	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-25,26;CQ=63.21;EVENT=gridss254_54;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_54o;RAS=0;RASQ=0.00;REF=378;REFPAIR=24;RP=3;RPQ=63.21;SB=1.0;SC=1X67N1X100M31D108M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:63.21:0.00:378:24:3:63.21:0:0.00:3
17	41216088	gridss254_58o	C	C[17:41216182[	211.42	LOW_QUAL	AS=1;ASQ=84.30;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1173,asm254-380;BEIDH=224,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-42,42;CIRPOS=-9,9;CQ=211.42;EVENT=gridss254_58;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_58h;RAS=1;RASQ=0.00;REF=254;REFPAIR=21;RP=6;RPQ=127.12;SC=223M1X83N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.30:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:211.42:0.00:254:21:6:127.12:0:0.00:6
17	41216182	gridss254_58h	A	]17:41216088]A	211.42	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1173,asm254-380;BEIDH=0,0;BEIDL=224,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-42,42;CQ=211.42;EVENT=gridss254_58;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_58o;RAS=1;RASQ=84.30;REF=380;REFPAIR=27;RP=6;RPQ=127.12;SC=1X17N1X289M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:211.42:84.30:380:27:6:127.12:0:0.00:6
17	41216845	gridss254_1257b	T	.AATGTTTTTTTTTTAATTTTAAAATTTTAAATAATTTAAATTTTATTTTTT	442.87	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=155.16;BASRP=0;BASSR=7;BEID=asm254-1151;BEIDH=-1;BEIDL=50;BQ=442.87;BSC=12;BSCQ=287.71;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=366.38;EVENT=gridss254_1257;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=29;REFPAIR=13;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:155.16:0:7:442.87:12:287.71:0:0.00:12:0.00:0:0.00:0.00:0.00:29:13:0:0.00:0:0.00:0
17	41228500	gridss254_78o	C	C[17:41228605[	230.69	LOW_QUAL	AS=1;ASQ=105.11;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1254,asm254-431;BEIDH=292,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-8,8;CQ=230.69;EVENT=gridss254_78;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_78h;RAS=1;RASQ=0.00;REF=372;REFPAIR=30;RP=6;RPQ=125.58;SC=291M1X15N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.11:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:230.69:0.00:372:30:6:125.58:0:0.00:6
17	41228605	gridss254_78h	C	]17:41228500]C	230.69	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1254,asm254-431;BEIDH=0,0;BEIDL=292,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-8,8;CQ=230.69;EVENT=gridss254_78;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_78o;RAS=1;RASQ=105.11;REF=346;REFPAIR=25;RP=6;RPQ=125.58;SC=1X15N1X218M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:230.69:105.11:346:25:6:125.58:0:0.00:6
17	41233863	gridss254_89o	A	A[17:41233920[	290.55	LOW_QUAL	AS=1;ASQ=145.28;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1295,asm254-484;BEIDH=271,2;BEIDL=0,0;BQ=19.31;BSC=1;BSCQ=19.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-18,19;CIRPOS=-18,19;CQ=290.55;EVENT=gridss254_89;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_89h;RAS=1;RASQ=0.00;REF=507;REFPAIR=32;RP=7;RPQ=145.28;SB=0.0;SC=270M1X36N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:145.28:7:0:0:0.00:0:0.00:0.00:0:0:19.31:1:19.31:0:0.00:1:0.00:0:0.00:290.55:0.00:507:32:7:145.28:0:0.00:7
17	41233920	gridss254_89h	T	]17:41233863]T	290.55	LOW_QUAL	AS=1;ASQ=0.00;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1295,asm254-484;BEIDH=0,0;BEIDL=271,2;BQ=47.22;BSC=2;BSCQ=47.22;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-18,19;CIRPOS=-18,19;CQ=290.55;EVENT=gridss254_89;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_89o;RAS=1;RASQ=145.28;REF=537;REFPAIR=37;RP=7;RPQ=145.28;SB=1.0;SC=1X36N1X215M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:7:0:0:0.00:0:0.00:0.00:0:0:47.22:2:47.22:0:0.00:2:0.00:0:0.00:290.55:145.28:537:37:7:145.28:0:0.00:7
17	41236698	gridss254_99o	A	A[17:41236758[	251.56	LOW_QUAL	AS=1;ASQ=125.78;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1340,asm254-524;BEIDH=166,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-15,16;CQ=251.56;EVENT=gridss254_99;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_99h;RAS=1;RASQ=0.00;REF=454;REFPAIR=30;RP=6;RPQ=125.78;SC=276M1X30N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:125.78:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:251.56:0.00:454:30:6:125.78:0:0.00:6
17	41236758	gridss254_99h	C	]17:41236698]C	251.56	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1340,asm254-524;BEIDH=0,0;BEIDL=166,2;BQ=20.10;BSC=1;BSCQ=20.10;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-15,16;CQ=251.56;EVENT=gridss254_99;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_99o;RAS=1;RASQ=125.78;REF=482;REFPAIR=32;RP=6;RPQ=125.78;SB=0.0;SC=1X30N1X241M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:20.10:1:20.10:0:0.00:1:0.00:0:0.00:251.56:125.78:482:32:6:125.78:0:0.00:6
17	41237506	gridss254_102o	C	C[17:41237602[	63.87	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=29.76;BSC=1;BSCQ=29.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-2,3;CQ=63.87;EVENT=gridss254_102;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_102h;RAS=0;RASQ=0.00;REF=635;REFPAIR=32;RP=3;RPQ=63.87;SB=0.0;SC=101M77D113M1X15N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:29.76:1:29.76:0:0.00:1:0.00:0:0.00:63.87:0.00:635:32:3:63.87:0:0.00:3
17	41237602	gridss254_102h	A	]17:41237506]A	63.87	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-8,8;CQ=63.87;EVENT=gridss254_102;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_102o;RAS=0;RASQ=0.00;REF=637;REFPAIR=49;RP=3;RPQ=63.87;SC=1X4N1X100M35D167M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.87:0.00:637:49:3:63.87:0:0.00:3
17	41243378	gridss254_109o	C	C[17:41243466[	145.94	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.51;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-569;BEIDH=2;BEIDL=0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-35,35;CQ=125.02;EVENT=gridss254_109;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_109h;RAS=0;RASQ=0.00;REF=341;REFPAIR=24;RP=4;RPQ=83.43;SB=0.0;SC=237M1X69N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.51:3:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:145.94:0.00:341:24:4:83.43:0:0.00:4
17	41243466	gridss254_109h	A	]17:41243378]A	145.94	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-569;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-35,35;CQ=125.02;EVENT=gridss254_109;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_109o;RAS=1;RASQ=62.51;REF=390;REFPAIR=15;RP=4;RPQ=83.43;SC=1X69N1X164M3D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:145.94:62.51:390:15:4:83.43:0:0.00:4
17	41244308	gridss254_115o	C	C[17:41244360[	122.99	LOW_QUAL	AS=1;ASQ=61.50;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1396,asm254-570;BEIDH=261,2;BEIDL=0,0;BQ=59.07;BSC=2;BSCQ=59.07;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-23,24;CIRPOS=-26,27;CQ=144.04;EVENT=gridss254_115;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_115h;RAS=1;RASQ=0.00;REF=603;REFPAIR=47;RP=3;RPQ=61.50;SB=0.5;SC=260M1X46N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:61.50:3:0:0:0.00:0:0.00:0.00:0:0:59.07:2:59.07:0:0.00:2:0.00:0:0.00:122.99:0.00:603:47:3:61.50:0:0.00:3
17	41244360	gridss254_115h	G	]17:41244308]G	122.99	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1396,asm254-570;BEIDH=0,0;BEIDL=261,2;BQ=41.37;BSC=2;BSCQ=41.37;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-26,27;CIRPOS=-23,24;CQ=144.04;EVENT=gridss254_115;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_115o;RAS=1;RASQ=61.50;REF=598;REFPAIR=44;RP=3;RPQ=61.50;SB=0.5;SC=1X52N1X153M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:41.37:2:41.37:0:0.00:2:0.00:0:0.00:122.99:61.50:598:44:3:61.50:0:0.00:3
17	41244403	gridss254_118o	A	A[17:41244535[	207.01	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=103.50;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-572;BEIDH=2;BEIDL=0;BQ=28.87;BSC=1;BSCQ=28.87;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-6,6;CQ=207.01;EVENT=gridss254_118;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_118h;RAS=0;RASQ=0.00;REF=627;REFPAIR=44;RP=5;RPQ=103.50;SB=0.0;SC=295M1X11N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:103.50:5:0:0:0.00:0:0.00:0.00:0:0:28.87:1:28.87:0:0.00:1:0.00:0:0.00:207.01:0.00:627:44:5:103.50:0:0.00:5
17	41244535	gridss254_118h	C	]17:41244403]C	207.01	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=5;BANRPQ=103.50;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-572;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-6,6;CQ=207.01;EVENT=gridss254_118;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_118o;RAS=1;RASQ=103.50;REF=559;REFPAIR=33;RP=5;RPQ=103.50;SC=1X11N1X189M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:5:103.50:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:207.01:103.50:559:33:5:103.50:0:0.00:5
17	41244612	gridss254_120o	C	C[17:41244789[	167.35	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.56;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-571;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-16,16;CQ=167.35;EVENT=gridss254_120;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_120h;RAS=0;RASQ=0.00;REF=544;REFPAIR=28;RP=5;RPQ=104.80;SC=101M51D123M1X31N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.56:3:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.35:0.00:544:28:5:104.80:0:0.00:5
17	41244789	gridss254_120h	A	]17:41244612]A	167.35	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=5;BANRPQ=104.80;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-571;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-16,16;CQ=167.35;EVENT=gridss254_120;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_120o;RAS=1;RASQ=62.56;REF=476;REFPAIR=33;RP=5;RPQ=104.80;SC=1X31N1X209M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:5:104.80:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.35:62.56:476:33:5:104.80:0:0.00:5
17	41244857	gridss254_169o	T	]17:41245011]T	290.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=10;ASSR=0;BA=0;BANRP=4;BANRPQ=82.28;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-568;BEIDH=0;BEIDL=2;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-56,57;CIRPOS=-56,57;CQ=207.78;EVENT=gridss254_169;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_169h;RAS=1;RASQ=207.78;REF=370;REFPAIR=22;RP=4;RPQ=82.28;SB=0.0;SC=1X112N1X365M;SR=0;SRQ=0.00;SVTYPE=BND;VF=10	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:10:0:4:82.28:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:290.06:207.78:370:22:4:82.28:0:0.00:10
17	41245011	gridss254_169h	T	T[17:41244857[	290.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=207.78;ASRP=10;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-568;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-56,57;CIRPOS=-56,57;CQ=207.78;EVENT=gridss254_169;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_169o;RAS=0;RASQ=0.00;REF=575;REFPAIR=29;RP=4;RPQ=82.28;SC=101M20D140M54D1X112N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=10	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:207.78:10:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:290.06:0.00:575:29:4:82.28:0:0.00:10
17	41245617	gridss254_128o	C	C[17:41245754[	128.41	LOW_QUAL	AS=1;ASQ=64.20;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1444,asm254-644;BEIDH=173,2;BEIDL=0,0;BQ=99.18;BSC=4;BSCQ=99.18;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-67,68;CIRPOS=-67,68;CQ=128.41;EVENT=gridss254_128;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_128h;RAS=1;RASQ=0.00;REF=549;REFPAIR=31;RP=3;RPQ=64.20;SB=0.0;SC=172M1X134N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.20:3:0:0:0.00:0:0.00:0.00:0:0:99.18:4:99.18:0:0.00:4:0.00:0:0.00:128.41:0.00:549:31:3:64.20:0:0.00:3
17	41245754	gridss254_128h	T	]17:41245617]T	128.41	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1444,asm254-644;BEIDH=0,0;BEIDL=173,2;BQ=68.75;BSC=3;BSCQ=68.75;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-67,68;CIRPOS=-67,68;CQ=128.41;EVENT=gridss254_128;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_128o;RAS=1;RASQ=64.20;REF=467;REFPAIR=42;RP=3;RPQ=64.20;SB=0.33333334;SC=1X134N1X123M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:68.75:3:68.75:0:0.00:3:0.00:0:0.00:128.41:64.20:467:42:3:64.20:0:0.00:3
17	41246403	gridss254_131o	A	A[17:41246473[	291.64	LOW_QUAL	AS=1;ASQ=124.73;ASRP=6;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1443,asm254-642;BEIDH=194,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-57,57;CIRPOS=-9,10;CQ=291.64;EVENT=gridss254_131;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_131h;RAS=1;RASQ=0.00;REF=584;REFPAIR=29;RP=8;RPQ=166.91;SC=193M1X113N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:124.73:6:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:291.64:0.00:584:29:8:166.91:0:0.00:8
17	41246473	gridss254_131h	G	]17:41246403]G	291.64	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1443,asm254-642;BEIDH=0,0;BEIDL=194,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-57,57;CQ=291.64;EVENT=gridss254_131;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_131o;RAS=1;RASQ=124.73;REF=588;REFPAIR=28;RP=8;RPQ=166.91;SC=1X18N1X288M;SR=0;SRQ=0.00;SVTYPE=BND;VF=8	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:291.64:124.73:588:28:8:166.91:0:0.00:8
17	41246532	gridss254_134o	T	T[17:41246660[	83.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.22;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-650;BEIDH=2;BEIDL=0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-10,11;CQ=126.44;EVENT=gridss254_134;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_134h;RAS=0;RASQ=0.00;REF=461;REFPAIR=28;RP=1;RPQ=20.69;SB=0.0;SC=96M1X20N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.22:3:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:83.91:0.00:461:28:1:20.69:0:0.00:3
17	41246660	gridss254_134h	T	]17:41246532]T	83.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-650;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-10,11;CQ=126.44;EVENT=gridss254_134;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_134o;RAS=1;RASQ=63.22;REF=320;REFPAIR=27;RP=1;RPQ=20.69;SC=1X20N1X188M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:83.91:63.22:320:27:1:20.69:0:0.00:3
17	41256769	gridss254_141o	T	T[17:41256822[	62.29	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-18,19;CQ=62.29;EVENT=gridss254_141;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_141h;RAS=0;RASQ=0.00;REF=164;REFPAIR=13;RP=3;RPQ=62.29;SC=101M67D110M1X36N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.29:0.00:164:13:3:62.29:0:0.00:3
17	41256822	gridss254_141h	G	]17:41256769]G	62.29	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIRPOS=-18,19;CQ=62.29;EVENT=gridss254_141;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_141o;RAS=0;RASQ=0.00;REF=396;REFPAIR=24;RP=3;RPQ=62.29;SC=1X92M40D175M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.29:0.00:396:24:3:62.29:0:0.00:3
17	41261608	gridss254_148o	A	A[17:41261820[	147.31	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.74;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-696;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=147.31;EVENT=gridss254_148;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_148h;RAS=0;RASQ=0.00;REF=361;REFPAIR=32;RP=3;RPQ=63.57;SC=101M64D133M1X8N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.74:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.31:0.00:361:32:3:63.57:0:0.00:4
17	41261820	gridss254_148h	A	]17:41261608]A	147.31	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-696;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=147.31;EVENT=gridss254_148;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_148o;RAS=1;RASQ=83.74;REF=217;REFPAIR=14;RP=3;RPQ=63.57;SC=1X8N1X156M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.31:83.74:217:14:3:63.57:0:0.00:4
17	41275367	gridss254_1583b	T	.AAGAAATTTTTAAAAAAATTTTTTTCCAAATAAATACCCTCTCACCAACCCCAATCACCCTTTTTT	2893.62	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=5;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=894.40;BASRP=0;BASSR=33;BEID=asm254-1543,asm254-1544,asm254-1545,asm254-1546,asm254-1561;BEIDH=-1,-1,-1,-1,-1;BEIDL=65,69,71,70,28;BQ=2893.62;BSC=74;BSCQ=1999.22;BUM=0;BUMQ=0.00;BVF=74;CAS=0;CASQ=0.00;CQ=2432.08;EVENT=gridss254_1583;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=162;REFPAIR=62;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:894.40:0:33:2893.62:74:1999.22:0:0.00:74:0.00:0:0.00:0.00:0.00:162:62:0:0.00:0:0.00:0
17	41275831	gridss254_157o	G	G[17:41275944[	208.46	LOW_QUAL	AS=1;ASQ=104.23;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1606,asm254-766;BEIDH=155,2;BEIDL=0,0;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-30,30;CIRPOS=-30,30;CQ=208.46;EVENT=gridss254_157;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_157h;RAS=1;RASQ=0.00;REF=448;REFPAIR=31;RP=5;RPQ=104.23;SB=1.0;SC=247M1X59N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.23:5:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:208.46:0.00:448:31:5:104.23:0:0.00:5
17	41275944	gridss254_157h	T	]17:41275831]T	208.46	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1606,asm254-766;BEIDH=0,0;BEIDL=155,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-30,30;CIRPOS=-30,30;CQ=208.46;EVENT=gridss254_157;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_157o;RAS=1;RASQ=104.23;REF=454;REFPAIR=27;RP=5;RPQ=104.23;SC=1X59N1X171M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:208.46:104.23:454:27:5:104.23:0:0.00:5
17	41277866	gridss254_164o	T	T[17:41278040[	128.24	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=64.12;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-770;BEIDH=2;BEIDL=0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-34,35;CIRPOS=-34,35;CQ=128.24;EVENT=gridss254_164;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_164h;RAS=0;RASQ=0.00;REF=370;REFPAIR=30;RP=3;RPQ=64.12;SB=0.0;SC=238M1X68N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.12:3:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:128.24:0.00:370:30:3:64.12:0:0.00:3
17	41278040	gridss254_164h	G	]17:41277866]G	128.24	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-770;BEIDH=0;BEIDL=2;BQ=19.17;BSC=1;BSCQ=19.17;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-34,35;CIRPOS=-34,35;CQ=128.24;EVENT=gridss254_164;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_164o;RAS=1;RASQ=64.12;REF=346;REFPAIR=26;RP=3;RPQ=64.12;SB=0.0;SC=1X68N1X144M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:19.17:1:19.17:0:0.00:1:0.00:0:0.00:128.24:64.12:346:26:3:64.12:0:0.00:3
17	41463769	gridss254_1622b	G	.AAGAGCCGGCAGAGGTTTGTCATCGTGCTCG	954.27	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=466.01;BASRP=0;BASSR=20;BEID=asm254-1632;BEIDH=-1;BEIDL=30;BQ=954.27;BSC=21;BSCQ=488.26;BUM=0;BUMQ=0.00;BVF=19;CAS=0;CASQ=0.00;CQ=954.27;EVENT=gridss254_1622;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=496;REFPAIR=37;RP=0;RPQ=0.00;SB=0.6097561;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:466.01:0:20:954.27:21:488.26:0:0.00:19:0.00:0:0.00:0.00:0.00:496:37:0:0.00:0:0.00:0
17	41463829	gridss254_881b	A	AGATGCATCCAA.	540.45	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=281.43;BASRP=0;BASSR=14;BEID=asm254-782;BEIDH=-1;BEIDL=0;BQ=540.45;BSC=13;BSCQ=259.02;BUM=0;BUMQ=0.00;BVF=13;CAS=0;CASQ=0.00;CQ=540.45;EVENT=gridss254_881;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=809;REFPAIR=35;RP=0;RPQ=0.00;SB=0.6296296;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:281.43:0:14:540.45:13:259.02:0:0.00:13:0.00:0:0.00:0.00:0.00:809:35:0:0.00:0:0.00:0
17	41463888	gridss254_885b	C	CGTTCCGTGATCAATGGCTTATACTACCTGCACCTCAGTTTTTCCCGGGCAAAAAAGGAAGCTTGCTGCCGGTGCGTT.	6408.23	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=3190.70;BASRP=0;BASSR=105;BEID=asm254-781;BEIDH=-1;BEIDL=0;BQ=6408.23;BSC=106;BSCQ=3217.52;BUM=0;BUMQ=0.00;BVF=94;CAS=0;CASQ=0.00;CQ=6353.87;EVENT=gridss254_885;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=180;REFPAIR=8;RP=0;RPQ=0.00;SB=0.1800948;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:3190.70:0:105:6408.23:106:3217.52:0:0.00:94:0.00:0:0.00:0.00:0.00:180:8:0:0.00:0:0.00:0
17	56771443	gridss256_7o	C	C[17:56771559[	187.71	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=104.11;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-42;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-6,7;CQ=187.71;EVENT=gridss256_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_7h;RAS=0;RASQ=0.00;REF=475;REFPAIR=30;RP=4;RPQ=83.59;SC=281M1X25N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:104.11:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:187.71:0.00:475:30:4:83.59:0:0.00:5
17	56771559	gridss256_7h	C	]17:56771443]C	187.71	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=3;BANRPQ=62.18;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-42;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-13,13;CQ=187.71;EVENT=gridss256_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_7o;RAS=1;RASQ=104.11;REF=117;REFPAIR=8;RP=4;RPQ=83.59;SC=1X12N1X259M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:3:62.18:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:187.71:104.11:117:8:4:83.59:0:0.00:5
17	56788234	gridss256_20o	C	C[17:56788343[	63.20	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=81.96;BSC=3;BSCQ=81.96;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-79,79;CIRPOS=-3,4;CQ=63.20;EVENT=gridss256_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_20h;RAS=0;RASQ=0.00;REF=268;REFPAIR=24;RP=3;RPQ=63.20;SB=1.0;SC=149M1X157N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:81.96:3:81.96:0:0.00:3:0.00:0:0.00:63.20:0.00:268:24:3:63.20:0:0.00:3
17	56788343	gridss256_20h	C	]17:56788234]C	63.20	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,4;CIRPOS=-79,79;CQ=63.20;EVENT=gridss256_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_20o;RAS=0;RASQ=0.00;REF=223;REFPAIR=24;RP=3;RPQ=63.20;SC=1X6N1X194M5D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.20:0.00:223:24:3:63.20:0:0.00:3
17	56800359	gridss256_25o	T	T[17:56800424[	208.57	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=82.91;ASRP=4;ASSR=0;BA=0;BANRP=2;BANRPQ=42.75;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-154;BEIDH=2;BEIDL=0;BQ=60.35;BSC=2;BSCQ=60.35;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-41,42;CIRPOS=-13,13;CQ=208.57;EVENT=gridss256_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_25h;RAS=0;RASQ=0.00;REF=472;REFPAIR=31;RP=6;RPQ=125.66;SB=1.0;SC=224M1X82N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:82.91:4:0:2:42.75:0:0.00:0.00:0:0:60.35:2:60.35:0:0.00:2:0.00:0:0.00:208.57:0.00:472:31:6:125.66:0:0.00:6
17	56800391	gridss256_27o	A	A[17:56800477[	85.57	LOW_QUAL	AS=1;ASQ=64.16;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1287,asm256-158;BEIDH=225,2;BEIDL=0,0;BQ=21.65;BSC=1;BSCQ=21.65;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-73,73;CIRPOS=-5,6;CQ=169.19;EVENT=gridss256_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_27h;RAS=1;RASQ=0.00;REF=472;REFPAIR=31;RP=1;RPQ=21.41;SB=0.0;SC=224M1X145N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.16:3:0:0:0.00:0:0.00:0.00:0:0:21.65:1:21.65:0:0.00:1:0.00:0:0.00:85.57:0.00:472:31:1:21.41:0:0.00:3
17	56800424	gridss256_25h	T	]17:56800359]T	208.57	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=6;BANRPQ=125.66;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-154;BEIDH=0;BEIDL=2;BQ=22.94;BSC=1;BSCQ=22.94;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-41,42;CQ=208.57;EVENT=gridss256_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_25o;RAS=1;RASQ=82.91;REF=553;REFPAIR=38;RP=6;RPQ=125.66;SB=0.0;SC=1X25N1X281M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:6:125.66:0:0.00:0.00:0:0:22.94:1:22.94:0:0.00:1:0.00:0:0.00:208.57:82.91:553:38:6:125.66:0:0.00:6
17	56800477	gridss256_27h	T	]17:56800391]T	85.57	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1287,asm256-158;BEIDH=0,0;BEIDL=225,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-73,73;CQ=169.19;EVENT=gridss256_27;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_27o;RAS=1;RASQ=64.16;REF=559;REFPAIR=47;RP=1;RPQ=21.41;SC=1X10N1X134D141M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:85.57:64.16:559:47:1:21.41:0:0.00:3
17	56801642	gridss256_33o	A	A[17:56801718[	63.30	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=46.58;BSC=2;BSCQ=46.58;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-39,39;CQ=63.30;EVENT=gridss256_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_33h;RAS=0;RASQ=0.00;REF=578;REFPAIR=38;RP=3;RPQ=63.30;SB=0.5;SC=239M1X67N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:46.58:2:46.58:0:0.00:2:0.00:0:0.00:63.30:0.00:578:38:3:63.30:0:0.00:3
17	56801718	gridss256_33h	A	]17:56801642]A	63.30	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-34,34;CQ=63.30;EVENT=gridss256_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_33o;RAS=0;RASQ=0.00;REF=331;REFPAIR=31;RP=3;RPQ=63.30;SB=0.0;SC=1X77N1X101M27D40M1D61M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:63.30:0.00:331:31:3:63.30:0:0.00:3
17	56802061	gridss256_36o	A	A[17:56802118[	145.60	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.04;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-153;BEIDH=2;BEIDL=0;BQ=66.87;BSC=3;BSCQ=66.87;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-23,24;CIRPOS=-23,24;CQ=145.60;EVENT=gridss256_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_36h;RAS=0;RASQ=0.00;REF=265;REFPAIR=13;RP=3;RPQ=62.57;SB=0.33333334;SC=260M1X46N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.04:4:0:0:0.00:0:0.00:0.00:0:0:66.87:3:66.87:0:0.00:3:0.00:0:0.00:145.60:0.00:265:13:3:62.57:0:0.00:4
17	56802118	gridss256_36h	A	]17:56802061]A	145.60	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-153;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-23,24;CIRPOS=-23,24;CQ=145.60;EVENT=gridss256_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_36o;RAS=1;RASQ=83.04;REF=300;REFPAIR=25;RP=3;RPQ=62.57;SC=1X46N1X299M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:145.60:83.04:300:25:3:62.57:0:0.00:4
17	56802442	gridss256_39o	T	T[17:56802498[	439.65	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=230.05;ASRP=11;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-152;BEIDH=2;BEIDL=0;BQ=20.83;BSC=1;BSCQ=20.83;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-19,19;CIRPOS=-7,7;CQ=439.65;EVENT=gridss256_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_39h;RAS=0;RASQ=0.00;REF=580;REFPAIR=48;RP=10;RPQ=209.60;SB=1.0;SC=269M1X37N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=11	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:230.05:11:0:0:0.00:0:0.00:0.00:0:0:20.83:1:20.83:0:0.00:1:0.00:0:0.00:439.65:0.00:580:48:10:209.60:0:0.00:11
17	56802498	gridss256_39h	A	]17:56802442]A	439.65	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=11;ASSR=0;BA=0;BANRP=10;BANRPQ=209.60;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-152;BEIDH=0;BEIDL=2;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-19,19;CQ=439.65;EVENT=gridss256_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_39o;RAS=1;RASQ=230.05;REF=716;REFPAIR=39;RP=10;RPQ=209.60;SB=0.0;SC=1X13N1X298M;SR=0;SRQ=0.00;SVTYPE=BND;VF=11	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:11:0:10:209.60:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:439.65:230.05:716:39:10:209.60:0:0.00:11
17	56807526	gridss256_1456b	T	.TATTTTTTTTTTTCTCTTTAAAACAGCTTTTTTT	515.30	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=80.00;BASRP=0;BASSR=5;BEID=asm256-1310;BEIDH=-1;BEIDL=33;BQ=515.30;BSC=16;BSCQ=435.30;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=292.66;EVENT=gridss256_1456;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=87;REFPAIR=24;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:80.00:0:5:515.30:16:435.30:0:0.00:16:0.00:0:0.00:0.00:0.00:87:24:0:0.00:0:0.00:0
17	56811950	gridss256_1480b	T	.TTTTTCCCTTTTTCCTTTAAAATTTTTGGAAAAAACCTTTCTTTTTTTTTTTTTT	1649.94	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=558.87;BASRP=0;BASSR=22;BEID=asm256-1342,asm256-1343;BEIDH=-1,-1;BEIDL=54,74;BQ=1649.94;BSC=40;BSCQ=1091.07;BUM=0;BUMQ=0.00;BVF=40;CAS=0;CASQ=0.00;CQ=1033.33;EVENT=gridss256_1480;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=97;REFPAIR=49;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:558.87:0:22:1649.94:40:1091.07:0:0.00:40:0.00:0:0.00:0.00:0.00:97:49:0:0.00:0:0.00:0
17	58676778	gridss256_52o	G	G[17:58676888[	210.47	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=105.23;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-268;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-16,16;CQ=210.47;EVENT=gridss256_52;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_52h;RAS=0;RASQ=0.00;REF=413;REFPAIR=28;RP=5;RPQ=105.23;SC=275M1X31N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.23:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:210.47:0.00:413:28:5:105.23:0:0.00:5
17	58676888	gridss256_52h	A	]17:58676778]A	210.47	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-268;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-16,16;CQ=210.47;EVENT=gridss256_52;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_52o;RAS=1;RASQ=105.23;REF=286;REFPAIR=34;RP=5;RPQ=105.23;SC=1X31N1X246M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:210.47:105.23:286:34:5:105.23:0:0.00:5
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17	58738919	gridss256_96o	T	T[17:58739181[	147.95	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.13;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-473;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-11,11;CQ=147.95;EVENT=gridss256_96;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_96h;RAS=0;RASQ=0.00;REF=442;REFPAIR=36;RP=3;RPQ=63.82;SC=101M53D131M1X21N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.13:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.95:0.00:442:36:3:63.82:0:0.00:4
17	58738993	gridss256_97h	A	]17:58738906]A	126.25	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1612,asm256-476;BEIDH=0,0;BEIDL=158,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-29,30;CQ=147.66;EVENT=gridss256_97;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_97o;RAS=1;RASQ=63.12;REF=416;REFPAIR=37;RP=3;RPQ=63.12;SC=1X16N1X127M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.25:63.12:416:37:3:63.12:0:0.00:3
17	58739181	gridss256_96h	T	]17:58738919]T	147.95	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-473;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-11,11;CQ=147.95;EVENT=gridss256_96;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_96o;RAS=1;RASQ=84.13;REF=369;REFPAIR=33;RP=3;RPQ=63.82;SC=1X21N1X181M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:147.95:84.13:369:33:3:63.82:0:0.00:4
17	58740074	gridss256_101o	C	C[17:58740194[	211.43	LOW_QUAL	AS=1;ASQ=84.56;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1611,asm256-472;BEIDH=136,2;BEIDL=0,0;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-60,61;CIRPOS=-7,8;CQ=190.54;EVENT=gridss256_101;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_101h;RAS=1;RASQ=0.00;REF=473;REFPAIR=33;RP=6;RPQ=126.87;SB=0.0;SC=186M1X120N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.56:4:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:211.43:0.00:473:33:6:126.87:0:0.00:6
17	58740194	gridss256_101h	C	]17:58740074]C	211.43	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1611,asm256-472;BEIDH=0,0;BEIDL=136,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-60,61;CQ=190.54;EVENT=gridss256_101;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_101o;RAS=1;RASQ=84.56;REF=531;REFPAIR=47;RP=6;RPQ=126.87;SC=1X14N1X292M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:211.43:84.56:531:47:6:126.87:0:0.00:6
17	58741668	gridss256_113o	A	A[17:58741744[	188.52	LOW_QUAL	AS=1;ASQ=83.92;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1610,asm256-474;BEIDH=134,2;BEIDL=0,0;BQ=20.23;BSC=1;BSCQ=20.23;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-34,34;CQ=188.52;EVENT=gridss256_113;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_113h;RAS=1;RASQ=0.00;REF=427;REFPAIR=24;RP=5;RPQ=104.60;SB=1.0;SC=101M5D133M1X67N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.92:4:0:0:0.00:0:0.00:0.00:0:0:20.23:1:20.23:0:0.00:1:0.00:0:0.00:188.52:0.00:427:24:5:104.60:0:0.00:5
17	58741744	gridss256_113h	C	]17:58741668]C	188.52	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1610,asm256-474;BEIDH=0,0;BEIDL=134,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-34,34;CQ=188.52;EVENT=gridss256_113;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_113o;RAS=1;RASQ=83.92;REF=151;REFPAIR=12;RP=5;RPQ=104.60;SC=1X67N1X213M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:188.52:83.92:151:12:5:104.60:0:0.00:5
17	59756047	gridss256_1713b	T	.TTTTATAAAAAAAAAATTAAAAAAAAAAAAACT	88.84	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=23.48;BASRP=0;BASSR=1;BEID=asm256-1634;BEIDH=-1;BEIDL=32;BQ=88.84;BSC=3;BSCQ=65.36;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=88.84;EVENT=gridss256_1713;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=104;REFPAIR=8;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:23.48:0:1:88.84:3:65.36:0:0.00:3:0.00:0:0.00:0.00:0.00:104:8:0:0.00:0:0.00:0
17	59756060	gridss256_747b	T	TTGGAAACTAAACTCATTTAAGATTTAGGTAAGCTAATCTAGGAAAATTTTACAAAATTTCTATATCCTTTTT.	412.41	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=156.58;BASRP=0;BASSR=6;BEID=asm256-493,asm256-495;BEIDH=-1,-1;BEIDL=0,0;BQ=412.41;BSC=9;BSCQ=255.83;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=208.55;EVENT=gridss256_747;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=143;REFPAIR=9;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:156.58:0:6:412.41:9:255.83:0:0.00:9:0.00:0:0.00:0.00:0.00:143:9:0:0.00:0:0.00:0
17	59758576	gridss256_1717b	T	.GGTGGGT	112.70	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=56.35;BASRP=0;BASSR=3;BEID=asm256-1638;BEIDH=-1;BEIDL=6;BQ=112.70;BSC=3;BSCQ=56.35;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=112.70;EVENT=gridss256_1717;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=30;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:56.35:0:3:112.70:3:56.35:0:0.00:3:0.00:0:0.00:0.00:0.00:30:0:0:0.00:0:0.00:0
17	59800586	gridss256_139o	G	G[17:59800782[	149.23	LOW_QUAL	AS=1;ASQ=63.91;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1738,asm256-615;BEIDH=164,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-18,18;CQ=149.23;EVENT=gridss256_139;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_139h;RAS=1;RASQ=0.00;REF=310;REFPAIR=24;RP=4;RPQ=85.32;SC=261M1X45N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.91:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:149.23:0.00:310:24:4:85.32:0:0.00:4
17	59800782	gridss256_139h	A	]17:59800586]A	149.23	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1738,asm256-615;BEIDH=0,0;BEIDL=164,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-23,23;CQ=149.23;EVENT=gridss256_139;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_139o;RAS=1;RASQ=63.91;REF=537;REFPAIR=38;RP=4;RPQ=85.32;SC=1X35N1X271M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:149.23:63.91:537:38:4:85.32:0:0.00:4
17	59801694	gridss256_145o	C	C[17:59801990[	128.47	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=64.23;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-616;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-5,6;CQ=128.47;EVENT=gridss256_145;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_145h;RAS=0;RASQ=0.00;REF=340;REFPAIR=25;RP=3;RPQ=64.23;SC=163M33D100M1X10N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.23:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:128.47:0.00:340:25:3:64.23:0:0.00:3
17	59801990	gridss256_145h	C	]17:59801694]C	128.47	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=42.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-616;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-5,6;CQ=128.47;EVENT=gridss256_145;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_145o;RAS=1;RASQ=64.23;REF=319;REFPAIR=17;RP=3;RPQ=64.23;SC=1X10N1X141M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:42.82:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:128.47:64.23:319:17:3:64.23:0:0.00:3
17	59805675	gridss256_1809b	A	.AATAGAAACTTTTGATTTTAAAAAGATAA	335.41	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=67.14;BASRP=0;BASSR=3;BEID=asm256-1748;BEIDH=-1;BEIDL=28;BQ=335.41;BSC=9;BSCQ=268.27;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=335.41;EVENT=gridss256_1809;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=41;REFPAIR=15;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:67.14:0:3:335.41:9:268.27:0:0.00:9:0.00:0:0.00:0.00:0.00:41:15:0:0.00:0:0.00:0
17	59807610	gridss256_153o	A	A[17:59807756[	103.66	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=61.99;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-659;BEIDH=2;BEIDL=0;BQ=19.76;BSC=1;BSCQ=19.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-31,31;CIRPOS=-31,31;CQ=103.66;EVENT=gridss256_153;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_153h;RAS=0;RASQ=0.00;REF=217;REFPAIR=22;RP=2;RPQ=41.66;SB=0.0;SC=101M44D100M1X61N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:61.99:3:0:0:0.00:0:0.00:0.00:0:0:19.76:1:19.76:0:0.00:1:0.00:0:0.00:103.66:0.00:217:22:2:41.66:0:0.00:3
17	59807756	gridss256_153h	T	]17:59807610]T	103.66	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-659;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-31,31;CIRPOS=-31,31;CQ=103.66;EVENT=gridss256_153;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_153o;RAS=1;RASQ=61.99;REF=160;REFPAIR=11;RP=2;RPQ=41.66;SC=1X61N1X181M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:103.66:61.99:160:11:2:41.66:0:0.00:3
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17	59833536	gridss256_180o	T	T[17:59833580[	207.53	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=103.76;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-728;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=207.53;EVENT=gridss256_180;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_180h;RAS=0;RASQ=0.00;REF=354;REFPAIR=25;RP=5;RPQ=103.76;SC=301M1X5N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:103.76:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:207.53:0.00:354:25:5:103.76:0:0.00:5
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17	59834743	gridss256_185h	G	]17:59834663]G	148.64	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=63.63;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-730;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-18,19;CQ=148.64;EVENT=gridss256_185;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_185o;RAS=1;RASQ=63.63;REF=250;REFPAIR=22;RP=4;RPQ=85.01;SC=1X26N1X280M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:3:63.63:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:148.64:63.63:250:22:4:85.01:0:0.00:4
17	59841755	gridss256_190o	T	T[17:59841793[	62.42	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-11,12;CQ=62.42;EVENT=gridss256_190;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_190h;RAS=0;RASQ=0.00;REF=411;REFPAIR=39;RP=3;RPQ=62.42;SC=31M78D114M1X13N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.42:0.00:411:39:3:62.42:0:0.00:3
17	59841793	gridss256_190h	G	]17:59841755]G	62.42	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,12;CIRPOS=-7,7;CQ=62.42;EVENT=gridss256_190;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_190o;RAS=0;RASQ=0.00;REF=399;REFPAIR=28;RP=3;RPQ=62.42;SC=1X22N1X100M57D95M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.42:0.00:399:28:3:62.42:0:0.00:3
17	59844345	gridss256_194o	A	A[17:59844398[	124.48	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.24;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-764;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-21,21;CQ=124.48;EVENT=gridss256_194;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_194h;RAS=0;RASQ=0.00;REF=208;REFPAIR=20;RP=3;RPQ=62.24;SC=101M16D148M1X41N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.24:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:124.48:0.00:208:20:3:62.24:0:0.00:3
17	59844398	gridss256_194h	G	]17:59844345]G	124.48	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-764;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-21,21;CQ=124.48;EVENT=gridss256_194;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_194o;RAS=1;RASQ=62.24;REF=284;REFPAIR=21;RP=3;RPQ=62.24;SC=1X41N1X242M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:124.48:62.24:284:21:3:62.24:0:0.00:3
17	59852752	gridss256_200o	A	A[17:59852938[	126.08	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.04;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-784;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-6,6;CQ=126.08;EVENT=gridss256_200;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_200h;RAS=0;RASQ=0.00;REF=138;REFPAIR=11;RP=3;RPQ=63.04;SC=101M43D151M1X11N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.04:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.08:0.00:138:11:3:63.04:0:0.00:3
17	59852938	gridss256_200h	A	]17:59852752]A	126.08	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-784;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-6,6;CQ=126.08;EVENT=gridss256_200;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_200o;RAS=1;RASQ=63.04;REF=124;REFPAIR=9;RP=3;RPQ=63.04;SC=1X11N1X134M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.08:63.04:124:9:3:63.04:0:0.00:3
17	59857610	gridss256_1001b	A	AAAAAAACAACCTGGTAATTTTTTAAGATAAGGTTAGGCCC.	190.53	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=95.26;BASRP=0;BASSR=4;BEID=asm256-792;BEIDH=-1;BEIDL=0;BQ=190.53;BSC=4;BSCQ=95.26;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=171.22;EVENT=gridss256_1001;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=184;REFPAIR=19;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:95.26:0:4:190.53:4:95.26:0:0.00:4:0.00:0:0.00:0.00:0.00:184:19:0:0.00:0:0.00:0
17	59862613	gridss256_211o	T	T[17:59862690[	105.32	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.28;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-812;BEIDH=2;BEIDL=0;BQ=19.17;BSC=1;BSCQ=19.17;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-20,20;CIRPOS=-20,20;CQ=126.55;EVENT=gridss256_211;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_211h;RAS=0;RASQ=0.00;REF=214;REFPAIR=14;RP=2;RPQ=42.05;SB=0.0;SC=101M66D100M1X39N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.28:3:0:0:0.00:0:0.00:0.00:0:0:19.17:1:19.17:0:0.00:1:0.00:0:0.00:105.32:0.00:214:14:2:42.05:0:0.00:3
17	59862690	gridss256_211h	G	]17:59862613]G	105.32	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-812;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-20,20;CIRPOS=-20,20;CQ=126.55;EVENT=gridss256_211;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_211o;RAS=1;RASQ=63.28;REF=149;REFPAIR=13;RP=2;RPQ=42.05;SC=1X39N1X213M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:105.32:63.28:149:13:2:42.05:0:0.00:3
17	59876787	gridss256_1964b	A	.AGCAACA	137.28	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=56.67;BASRP=0;BASSR=3;BEID=asm256-1944;BEIDH=-1;BEIDL=6;BQ=137.28;BSC=4;BSCQ=80.61;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=113.35;EVENT=gridss256_1964;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=333;REFPAIR=28;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:56.67:0:3:137.28:4:80.61:0:0.00:4:0.00:0:0.00:0.00:0.00:333:28:0:0.00:0:0.00:0
17	59878645	gridss256_220o	T	T[17:59878766[	125.52	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.76;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-853;BEIDH=2;BEIDL=0;BQ=38.93;BSC=2;BSCQ=38.93;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-24,24;CQ=125.52;EVENT=gridss256_220;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_220h;RAS=0;RASQ=0.00;REF=643;REFPAIR=41;RP=3;RPQ=62.76;SB=0.5;SC=101M3D155M1X47N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.76:3:0:0:0.00:0:0.00:0.00:0:0:38.93:2:38.93:0:0.00:2:0.00:0:0.00:125.52:0.00:643:41:3:62.76:0:0.00:3
17	59878766	gridss256_220h	C	]17:59878645]C	125.52	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-853;BEIDH=0;BEIDL=2;BQ=26.40;BSC=1;BSCQ=26.40;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-24,24;CQ=125.52;EVENT=gridss256_220;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_220o;RAS=1;RASQ=62.76;REF=480;REFPAIR=25;RP=3;RPQ=62.76;SB=1.0;SC=1X47N1X172M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:26.40:1:26.40:0:0.00:1:0.00:0:0.00:125.52:62.76:480:25:3:62.76:0:0.00:3
17	59883650	gridss256_225o	C	C[17:59883802[	107.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=64.23;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-880;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-61,62;CIRPOS=-61,62;CQ=107.06;EVENT=gridss256_225;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_225h;RAS=0;RASQ=0.00;REF=317;REFPAIR=17;RP=2;RPQ=42.82;SC=184M1X122N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.23:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:107.06:0.00:317:17:2:42.82:0:0.00:3
17	59883802	gridss256_225h	T	]17:59883650]T	107.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-880;BEIDH=0;BEIDL=2;BQ=25.95;BSC=1;BSCQ=25.95;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-61,62;CIRPOS=-61,62;CQ=107.06;EVENT=gridss256_225;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_225o;RAS=1;RASQ=64.23;REF=62;REFPAIR=5;RP=2;RPQ=42.82;SB=0.0;SC=1X122N1X180M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:25.95:1:25.95:0:0.00:1:0.00:0:0.00:107.06:64.23:62:5:2:42.82:0:0.00:3
17	59884070	gridss256_1065b	G	GGTTGTTTTT.	271.13	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=135.56;BASRP=0;BASSR=7;BEID=asm256-866;BEIDH=-1;BEIDL=0;BQ=271.13;BSC=7;BSCQ=135.56;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=251.36;EVENT=gridss256_1065;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=89;REFPAIR=12;RP=0;RPQ=0.00;SB=0.14285715;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:135.56:0:7:271.13:7:135.56:0:0.00:7:0.00:0:0.00:0.00:0.00:89:12:0:0.00:0:0.00:0
17	59884620	gridss256_227o	A	A[17:59884885[	106.60	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.77;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-879;BEIDH=2;BEIDL=0;BQ=125.43;BSC=5;BSCQ=125.43;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-37,38;CIRPOS=-37,38;CQ=106.60;EVENT=gridss256_227;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_227h;RAS=0;RASQ=0.00;REF=156;REFPAIR=13;RP=2;RPQ=42.82;SB=0.4;SC=101M31D100M1X74N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.77:3:0:0:0.00:0:0.00:0.00:0:0:125.43:5:125.43:0:0.00:5:0.00:0:0.00:106.60:0.00:156:13:2:42.82:0:0.00:3
17	59884885	gridss256_227h	A	]17:59884620]A	106.60	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-879;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-37,38;CIRPOS=-37,38;CQ=106.60;EVENT=gridss256_227;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_227o;RAS=1;RASQ=63.77;REF=105;REFPAIR=12;RP=2;RPQ=42.82;SC=1X74N1X144M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:106.60:63.77:105:12:2:42.82:0:0.00:3
17	59887995	gridss256_237o	A	A[17:59888066[	125.19	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.60;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-903;BEIDH=2;BEIDL=0;BQ=29.97;BSC=1;BSCQ=29.97;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-28,28;CQ=125.19;EVENT=gridss256_237;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_237h;RAS=0;RASQ=0.00;REF=347;REFPAIR=15;RP=3;RPQ=62.60;SB=1.0;SC=142M9D100M1X55N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.60:3:0:0:0.00:0:0.00:0.00:0:0:29.97:1:29.97:0:0.00:1:0.00:0:0.00:125.19:0.00:347:15:3:62.60:0:0.00:3
17	59888066	gridss256_237h	C	]17:59887995]C	125.19	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-903;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-28,28;CQ=125.19;EVENT=gridss256_237;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_237o;RAS=1;RASQ=62.60;REF=150;REFPAIR=7;RP=3;RPQ=62.60;SC=1X55N1X193M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.19:62.60:150:7:3:62.60:0:0.00:3
17	59891138	gridss256_245o	T	T[17:59891228[	254.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=127.13;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-925;BEIDH=2;BEIDL=0;BQ=22.26;BSC=1;BSCQ=22.26;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-5,6;CQ=254.06;EVENT=gridss256_245;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_245h;RAS=0;RASQ=0.00;REF=489;REFPAIR=34;RP=6;RPQ=126.93;SB=0.0;SC=141M46D112M1X10N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:127.13:6:0:0:0.00:0:0.00:0.00:0:0:22.26:1:22.26:0:0.00:1:0.00:0:0.00:254.06:0.00:489:34:6:126.93:0:0.00:7
17	59891228	gridss256_245h	A	]17:59891138]A	254.06	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=6;BANRPQ=126.93;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-925;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-5,6;CQ=254.06;EVENT=gridss256_245;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_245o;RAS=1;RASQ=127.13;REF=293;REFPAIR=20;RP=6;RPQ=126.93;SC=1X10N1X318M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:6:126.93:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:254.06:127.13:293:20:6:126.93:0:0.00:7
17	59892490	gridss256_1125b	A	AACCCACATTAAAAAAAACCCCTCCTCCTTTTTCAAATTCT.	331.91	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=68.33;BASRP=0;BASSR=3;BEID=asm256-927;BEIDH=-1;BEIDL=0;BQ=331.91;BSC=11;BSCQ=263.57;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=136.66;EVENT=gridss256_1125;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=80;REFPAIR=16;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:68.33:0:3:331.91:11:263.57:0:0.00:11:0.00:0:0.00:0.00:0.00:80:16:0:0.00:0:0.00:0
17	59926259	gridss256_274o	A	A[17:59926392[	146.10	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.34;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1055;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-1,2;CQ=146.10;EVENT=gridss256_274;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_274h;RAS=0;RASQ=0.00;REF=188;REFPAIR=24;RP=4;RPQ=83.75;SC=101M52D151M1X2N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.34:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.10:0.00:188:24:4:83.75:0:0.00:4
17	59926392	gridss256_274h	C	]17:59926259]C	146.10	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=4;BANRPQ=83.75;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1055;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-1,2;CQ=146.10;EVENT=gridss256_274;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_274o;RAS=1;RASQ=62.34;REF=461;REFPAIR=37;RP=4;RPQ=83.75;SC=1X2N1X236M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:4:83.75:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:146.10:62.34:461:37:4:83.75:0:0.00:4
17	59927466	gridss256_2147b	T	.ATTCTCTCCACCCCCCTGCCTTGTTTTATTTTAATTATCTTTTTTTCCCTTCTT	505.21	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=137.14;BASRP=0;BASSR=5;BEID=asm256-2150;BEIDH=-1;BEIDL=53;BQ=505.21;BSC=14;BSCQ=368.07;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=357.96;EVENT=gridss256_2147;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=146;REFPAIR=27;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:137.14:0:5:505.21:14:368.07:0:0.00:14:0.00:0:0.00:0.00:0.00:146:27:0:0.00:0:0.00:0
17	59941034	gridss256_1267b	A	AACAAGGGCCCACGGTACCCAGCTAGGAAGGGTATAGGTACCCACTACAGTCACTAGTGTTTT.	949.70	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=186.39;BASRP=0;BASSR=7;BEID=asm256-1099;BEIDH=-1;BEIDL=0;BQ=949.70;BSC=29;BSCQ=763.31;BUM=0;BUMQ=0.00;BVF=29;CAS=0;CASQ=0.00;CQ=686.93;EVENT=gridss256_1267;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=147;REFPAIR=26;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:186.39:0:7:949.70:29:763.31:0:0.00:29:0.00:0:0.00:0.00:0.00:147:26:0:0.00:0:0.00:0
18	43928193	gridss262_29b	G	.GTTGCCCAGGGGGGGGGGGGGTGGGGGGGTGGGGGGCGAGGGGGGGG	429.70	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=129.52;BASRP=0;BASSR=5;BEID=asm262-24;BEIDH=-1;BEIDL=46;BQ=429.70;BSC=12;BSCQ=300.17;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=351.15;EVENT=gridss262_29;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=35;REFPAIR=11;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:129.52:0:5:429.70:12:300.17:0:0.00:12:0.00:0:0.00:0.00:0.00:35:11:0:0.00:0:0.00:0
19	5884720	gridss266_55b	T	.ACTTTCACCAAACCCCCCAAAATTTTGCAAAAAAACCCCAGGGGGAAACCCCAATTCAACTAATAAACT	422.73	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=90.00;BASRP=0;BASSR=3;BEID=asm266-38;BEIDH=-1;BEIDL=68;BQ=422.73;BSC=11;BSCQ=332.73;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=268.05;EVENT=gridss266_55;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=117;REFPAIR=16;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:90.00:0:3:422.73:11:332.73:0:0.00:11:0.00:0:0.00:0.00:0.00:117:16:0:0.00:0:0.00:0
19	11131824	gridss267_9o	C	C[19:11131976[	126.04	LOW_QUAL	AS=1;ASQ=63.02;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm267-252,asm267-84;BEIDH=200,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-29,30;CIRPOS=-29,30;CQ=126.04;EVENT=gridss267_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss267_9h;RAS=1;RASQ=0.00;REF=296;REFPAIR=16;RP=3;RPQ=63.02;SC=280M1X58N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.02:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.04:0.00:296:16:3:63.02:0:0.00:3
19	11131976	gridss267_9h	G	]19:11131824]G	126.04	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm267-252,asm267-84;BEIDH=0,0;BEIDL=200,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-29,30;CIRPOS=-29,30;CQ=126.04;EVENT=gridss267_9;IC=0;IMPRECISE;IQ=0.00;PARID=gridss267_9o;RAS=1;RASQ=63.02;REF=491;REFPAIR=34;RP=3;RPQ=63.02;SC=1X58N1X172M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.04:63.02:491:34:3:63.02:0:0.00:3
19	11132366	gridss267_12o	C	C[19:11132472[	146.26	LOW_QUAL	AS=1;ASQ=62.59;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm267-250,asm267-86;BEIDH=180,2;BEIDL=0,0;BQ=47.80;BSC=2;BSCQ=47.80;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-36,37;CQ=146.26;EVENT=gridss267_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss267_12h;RAS=1;RASQ=0.00;REF=251;REFPAIR=22;RP=4;RPQ=83.67;SB=0.5;SC=101M2D179M1X24N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.59:3:0:0:0.00:0:0.00:0.00:0:0:47.80:2:47.80:0:0.00:2:0.00:0:0.00:146.26:0.00:251:22:4:83.67:0:0.00:4
19	11132472	gridss267_12h	G	]19:11132366]G	146.26	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm267-250,asm267-86;BEIDH=0,0;BEIDL=180,2;BQ=44.22;BSC=2;BSCQ=44.22;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-36,37;CIRPOS=-12,13;CQ=146.26;EVENT=gridss267_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss267_12o;RAS=1;RASQ=62.59;REF=367;REFPAIR=15;RP=4;RPQ=83.67;SB=0.5;SC=1X72N1X203M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:44.22:2:44.22:0:0.00:2:0.00:0:0.00:146.26:62.59:367:15:4:83.67:0:0.00:4
19	11141982	gridss267_16o	C	C[19:11142025[	84.71	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-11,12;CQ=84.71;EVENT=gridss267_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss267_16h;RAS=0;RASQ=0.00;REF=433;REFPAIR=38;RP=4;RPQ=84.71;SC=180M1D100M1X25N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.71:0.00:433:38:4:84.71:0:0.00:4
19	11142025	gridss267_16h	A	]19:11141982]A	84.71	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=63.71;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-11,12;CIRPOS=-13,13;CQ=84.71;EVENT=gridss267_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss267_16o;RAS=0;RASQ=0.00;REF=441;REFPAIR=22;RP=4;RPQ=84.71;SB=0.0;SC=1X22N1X284M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:63.71:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:84.71:0.00:441:22:4:84.71:0:0.00:4
19	11142371	gridss267_18o	G	G[19:11142553[	146.92	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.25;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm267-132;BEIDH=7;BEIDL=0;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-29,29;CQ=126.50;EVENT=gridss267_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss267_18h;RAS=0;RASQ=0.00;REF=431;REFPAIR=44;RP=4;RPQ=83.67;SB=0.0;SC=249M1X57N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.25:3:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:146.92:0.00:431:44:4:83.67:0:0.00:4
19	11142553	gridss267_18h	T	]19:11142371]T	146.92	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=4;BANRPQ=83.67;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm267-132;BEIDH=0;BEIDL=7;BQ=45.08;BSC=2;BSCQ=45.08;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-29,29;CIRPOS=-29,29;CQ=126.50;EVENT=gridss267_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss267_18o;RAS=1;RASQ=63.25;REF=445;REFPAIR=27;RP=4;RPQ=83.67;SB=0.5;SC=1X57N1X140M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:4:83.67:0:0.00:0.00:0:0:45.08:2:45.08:0:0.00:1:0.00:0:0.00:146.92:63.25:445:27:4:83.67:0:0.00:4
19	18285693	gridss268_62b	A	AGACTCAGAAAACAGAATTCACCCCGCCCTGTCTGGCAGAGGCACAAAAAGAAA.	520.48	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=71.93;BASRP=0;BASSR=3;BEID=asm268-55;BEIDH=-1;BEIDL=0;BQ=520.48;BSC=17;BSCQ=448.54;BUM=0;BUMQ=0.00;BVF=17;CAS=0;CASQ=0.00;CQ=194.04;EVENT=gridss268_62;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=91;REFPAIR=9;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:71.93:0:3:520.48:17:448.54:0:0.00:17:0.00:0:0.00:0.00:0.00:91:9:0:0.00:0:0.00:0
19	45852961	gridss270_280b	G	.GTGGGGGGGCCCCCCAGGCCG	299.88	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=139.89;BASRP=0;BASSR=7;BEID=asm270-261;BEIDH=-1;BEIDL=20;BQ=299.88;BSC=8;BSCQ=159.99;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=279.79;EVENT=gridss270_280;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=5;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:139.89:0:7:299.88:8:159.99:0:0.00:8:0.00:0:0.00:0.00:0.00:5:0:0:0.00:0:0.00:0
19	45859087	gridss270_110b	T	TAAAGAGA.	228.34	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=76.33;BASRP=0;BASSR=4;BEID=asm270-91;BEIDH=-1;BEIDL=0;BQ=228.34;BSC=8;BSCQ=152.01;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=152.67;EVENT=gridss270_110;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=104;REFPAIR=12;RP=0;RPQ=0.00;SB=0.16666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:76.33:0:4:228.34:8:152.01:0:0.00:8:0.00:0:0.00:0.00:0.00:104:12:0:0.00:0:0.00:0
19	45874128	gridss270_384b	T	.CCAAGATT	227.91	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=113.96;BASRP=0;BASSR=6;BEID=asm270-376;BEIDH=-1;BEIDL=7;BQ=227.91;BSC=6;BSCQ=113.96;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=208.15;EVENT=gridss270_384;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=213;REFPAIR=10;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:113.96:0:6:227.91:6:113.96:0:0.00:6:0.00:0:0.00:0.00:0.00:213:10:0:0.00:0:0.00:0
19	45917735	gridss270_419b	A	.GCCAAAAGATGGGGATACCAGTTAAA	171.59	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=45.95;BASRP=0;BASSR=2;BEID=asm270-406;BEIDH=-1;BEIDL=25;BQ=171.59;BSC=6;BSCQ=125.64;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=149.34;EVENT=gridss270_419;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=82;REFPAIR=5;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:45.95:0:2:171.59:6:125.64:0:0.00:6:0.00:0:0.00:0.00:0.00:82:5:0:0.00:0:0.00:0
19	45917748	gridss270_218b	A	AAGGGAATAGGCAGGAAAGGGGGGAGGGGGGAGGAAGG.	348.35	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=66.00;BASRP=0;BASSR=3;BEID=asm270-196;BEIDH=-1;BEIDL=0;BQ=348.35;BSC=11;BSCQ=282.35;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=141.44;EVENT=gridss270_218;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=106;REFPAIR=8;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:66.00:0:3:348.35:11:282.35:0:0.00:11:0.00:0:0.00:0.00:0.00:106:8:0:0.00:0:0.00:0
19	47528067	gridss271_180b	T	.TGAATTCTAGTACAGAGACTGGCAGGAAGAAGGGGGGGCCGCCCGTCTCAAATGATGGGAGTCCCTATTTCTT	1159.78	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=348.74;BASRP=0;BASSR=12;BEID=asm271-152;BEIDH=-1;BEIDL=72;BQ=1159.78;BSC=28;BSCQ=811.04;BUM=0;BUMQ=0.00;BVF=28;CAS=0;CASQ=0.00;CQ=917.99;EVENT=gridss271_180;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=133;REFPAIR=33;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:348.74:0:12:1159.78:28:811.04:0:0.00:28:0.00:0:0.00:0.00:0.00:133:33:0:0.00:0:0.00:0
19	50888784	gridss271_201b	T	.CCGGGGGGGGGCAGGGGGGGGCCGGGGCCCCGCCCCAGCCCTTCCCCGGAAGGACCTTGTTCCCCCTTTTTTTT	853.77	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=64.00;BASRP=0;BASSR=4;BEID=asm271-182;BEIDH=-1;BEIDL=73;BQ=853.77;BSC=28;BSCQ=789.77;BUM=0;BUMQ=0.00;BVF=28;CAS=0;CASQ=0.00;CQ=516.01;EVENT=gridss271_201;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=129;REFPAIR=52;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:64.00:0:4:853.77:28:789.77:0:0.00:28:0.00:0:0.00:0.00:0.00:129:52:0:0.00:0:0.00:0
19	50916796	gridss271_19o	G	G[19:50917009[	127.33	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.67;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm271-139;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=127.33;EVENT=gridss271_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss271_19h;RAS=0;RASQ=0.00;REF=254;REFPAIR=17;RP=3;RPQ=63.67;SC=101M91D106M1X8N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.67:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.33:0.00:254:17:3:63.67:0:0.00:3
19	50917009	gridss271_19h	G	]19:50916796]G	127.33	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm271-139;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=127.33;EVENT=gridss271_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss271_19o;RAS=1;RASQ=63.67;REF=292;REFPAIR=11;RP=3;RPQ=63.67;SC=1X8N1X192M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:127.33:63.67:292:11:3:63.67:0:0.00:3
19	50918004	gridss271_20o	T	T[19:50918081[	104.51	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm271-310;BEIDH=135;BEIDL=0;BQ=75.85;BSC=3;BSCQ=75.85;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-29,30;CQ=104.51;EVENT=gridss271_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss271_20h;RAS=1;RASQ=0.00;REF=312;REFPAIR=20;RP=5;RPQ=104.51;SB=0.6666667;SC=101M60D134M1X11N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:75.85:3:75.85:0:0.00:3:0.00:0:0.00:104.51:0.00:312:20:5:104.51:0:0.00:5
19	50918081	gridss271_20h	C	]19:50918004]C	104.51	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm271-310;BEIDH=0;BEIDL=135;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-29,30;CIRPOS=-6,6;CQ=104.51;EVENT=gridss271_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss271_20o;RAS=0;RASQ=0.00;REF=348;REFPAIR=12;RP=5;RPQ=104.51;SC=1X58N1X254M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:104.51:0.00:348:12:5:104.51:0:0.00:5
19	50919800	gridss271_22o	G	G[19:50919840[	62.64	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-10,11;CQ=62.64;EVENT=gridss271_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss271_22h;RAS=0;RASQ=0.00;REF=201;REFPAIR=10;RP=3;RPQ=62.64;SC=136M70D100M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.64:0.00:201:10:3:62.64:0:0.00:3
19	50919840	gridss271_22h	G	]19:50919800]G	62.64	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=45.97;BSC=2;BSCQ=45.97;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=0,1;CQ=62.64;EVENT=gridss271_22;IC=0;IMPRECISE;IQ=0.00;PARID=gridss271_22o;RAS=0;RASQ=0.00;REF=191;REFPAIR=10;RP=3;RPQ=62.64;SB=1.0;SC=1X20N1X141M44D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:45.97:2:45.97:0:0.00:2:0.00:0:0.00:62.64:0.00:191:10:3:62.64:0:0.00:3
20	32264115	gridss275_3o	C	C[20:32264248[	63.17	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=36.04;BSC=1;BSCQ=36.04;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-30,31;CIRPOS=-7,7;CQ=63.17;EVENT=gridss275_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss275_3h;RAS=0;RASQ=0.00;REF=312;REFPAIR=16;RP=3;RPQ=63.17;SB=0.0;SC=246M1X60N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:36.04:1:36.04:0:0.00:1:0.00:0:0.00:63.17:0.00:312:16:3:63.17:0:0.00:3
20	32264248	gridss275_3h	C	]20:32264115]C	63.17	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-30,31;CQ=63.17;EVENT=gridss275_3;IC=0;IMPRECISE;IQ=0.00;PARID=gridss275_3o;RAS=0;RASQ=0.00;REF=485;REFPAIR=26;RP=3;RPQ=63.17;SC=1X13N1X130M62D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.17:0.00:485:26:3:63.17:0:0.00:3
20	60512323	gridss278_92b	A	AAAAAAATTGCCCTTTAGGTCATGTACCATATTGCCTCACACATTGCCTTGCTGACATCTCCCCATCACTACC.	451.80	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=180.00;BASRP=0;BASSR=9;BEID=asm278-59;BEIDH=-1;BEIDL=0;BQ=451.80;BSC=9;BSCQ=271.80;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=451.80;EVENT=gridss278_92;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=53;REFPAIR=14;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:180.00:0:9:451.80:9:271.80:0:0.00:10:0.00:0:0.00:0.00:0.00:53:14:0:0.00:0:0.00:0
20	60512340	gridss278_229b	A	.GGTACA	206.98	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=93.38;BASRP=0;BASSR=5;BEID=asm278-202;BEIDH=-1;BEIDL=5;BQ=206.98;BSC=6;BSCQ=113.61;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=186.75;EVENT=gridss278_229;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=118;REFPAIR=10;RP=0;RPQ=0.00;SB=0.8181818;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:93.38:0:5:206.98:6:113.61:0:0.00:6:0.00:0:0.00:0.00:0.00:118:10:0:0.00:0:0.00:0
20	60512854	gridss278_233b	G	.ACAGAAG	149.74	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.24;BASRP=0;BASSR=3;BEID=asm278-214;BEIDH=-1;BEIDL=6;BQ=149.74;BSC=4;BSCQ=92.50;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=114.48;EVENT=gridss278_233;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=297;REFPAIR=22;RP=0;RPQ=0.00;SB=0.71428573;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.24:0:3:149.74:4:92.50:0:0.00:4:0.00:0:0.00:0.00:0.00:297:22:0:0.00:0:0.00:0
20	60512873	gridss278_99b	G	GGATCCTGCAT.	192.48	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=96.24;BASRP=0;BASSR=5;BEID=asm278-61;BEIDH=-1;BEIDL=0;BQ=192.48;BSC=5;BSCQ=96.24;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=192.48;EVENT=gridss278_99;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=343;REFPAIR=23;RP=0;RPQ=0.00;SB=0.6;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:96.24:0:5:192.48:5:96.24:0:0.00:5:0.00:0:0.00:0.00:0.00:343:23:0:0.00:0:0.00:0
20	60512877	gridss278_235b	C	.CCAGGATCC	210.73	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=96.03;BASRP=0;BASSR=5;BEID=asm278-203;BEIDH=-1;BEIDL=8;BQ=210.73;BSC=6;BSCQ=114.70;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=210.73;EVENT=gridss278_235;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=337;REFPAIR=23;RP=0;RPQ=0.00;SB=0.36363637;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:96.03:0:5:210.73:6:114.70:0:0.00:6:0.00:0:0.00:0.00:0.00:337:23:0:0.00:0:0.00:0
20	60513839	gridss278_7o	C	C[20:60513901[	63.36	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.97;BSC=1;BSCQ=19.97;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-12,12;CIRPOS=-6,6;CQ=63.36;EVENT=gridss278_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss278_7h;RAS=0;RASQ=0.00;REF=385;REFPAIR=14;RP=3;RPQ=63.36;SB=1.0;SC=283M1X23N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.97:1:19.97:0:0.00:1:0.00:0:0.00:63.36:0.00:385:14:3:63.36:0:0.00:3
20	60513901	gridss278_7h	G	]20:60513839]G	63.36	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-12,12;CQ=63.36;EVENT=gridss278_7;IC=0;IMPRECISE;IQ=0.00;PARID=gridss278_7o;RAS=0;RASQ=0.00;REF=348;REFPAIR=24;RP=3;RPQ=63.36;SC=1X11N1X188M6D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.36:0.00:348:24:3:63.36:0:0.00:3
20	60515218	gridss278_13o	G	G[20:60515309[	62.76	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=89.91;BSC=3;BSCQ=89.91;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-23,23;CQ=62.76;EVENT=gridss278_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss278_13h;RAS=0;RASQ=0.00;REF=431;REFPAIR=13;RP=3;RPQ=62.76;SB=0.6666667;SC=239M1X67N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:89.91:3:89.91:0:0.00:3:0.00:0:0.00:62.76:0.00:431:13:3:62.76:0:0.00:3
20	60515309	gridss278_13h	T	]20:60515218]T	62.76	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=28.87;BSC=1;BSCQ=28.87;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-34,34;CQ=62.76;EVENT=gridss278_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss278_13o;RAS=0;RASQ=0.00;REF=373;REFPAIR=20;RP=3;RPQ=62.76;SB=1.0;SC=1X45N1X261M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:28.87:1:28.87:0:0.00:1:0.00:0:0.00:62.76:0.00:373:20:3:62.76:0:0.00:3
21	19544135	gridss280_23b	G	.ATGTGTCCACCCCTG	551.07	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=275.53;BASRP=0;BASSR=14;BEID=asm280-20;BEIDH=-1;BEIDL=14;BQ=551.07;BSC=14;BSCQ=275.53;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=551.07;EVENT=gridss280_23;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=91;REFPAIR=2;RP=0;RPQ=0.00;SB=0.78571427;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:275.53:0:14:551.07:14:275.53:0:0.00:14:0.00:0:0.00:0.00:0.00:91:2:0:0.00:0:0.00:0
22	29094708	gridss286_13o	T	T[22:29094782[	166.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.14;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm286-81;BEIDH=2;BEIDL=0;BQ=44.77;BSC=2;BSCQ=44.77;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-35,36;CQ=166.29;EVENT=gridss286_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss286_13h;RAS=0;RASQ=0.00;REF=444;REFPAIR=21;RP=4;RPQ=83.14;SB=0.0;SC=236M1X70N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.14:4:0:0:0.00:0:0.00:0.00:0:0:44.77:2:44.77:0:0.00:2:0.00:0:0.00:166.29:0.00:444:21:4:83.14:0:0.00:4
22	29094782	gridss286_13h	A	]22:29094708]A	166.29	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm286-81;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-35,36;CQ=166.29;EVENT=gridss286_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss286_13o;RAS=1;RASQ=83.14;REF=490;REFPAIR=27;RP=4;RPQ=83.14;SC=1X70N1X177M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:166.29:83.14:490:27:4:83.14:0:0.00:4
22	29115634	gridss286_38o	A	A[22:29115714[	84.61	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-10,10;CQ=84.61;EVENT=gridss286_38;IC=0;IMPRECISE;IQ=0.00;PARID=gridss286_38h;RAS=0;RASQ=0.00;REF=132;REFPAIR=17;RP=4;RPQ=84.61;SC=128M35D100M1X43N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.61:0.00:132:17:4:84.61:0:0.00:4
22	29115714	gridss286_38h	C	]22:29115634]C	84.61	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=64.07;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-10,10;CIRPOS=-22,22;CQ=84.61;EVENT=gridss286_38;IC=0;IMPRECISE;IQ=0.00;PARID=gridss286_38o;RAS=0;RASQ=0.00;REF=292;REFPAIR=17;RP=4;RPQ=84.61;SC=1X19N1X287M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:64.07:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:84.61:0.00:292:17:4:84.61:0:0.00:4
22	29118810	gridss286_41o	T	T[22:29118959[	63.87	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm286-450;BEIDH=237;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-63,63;CQ=63.87;EVENT=gridss286_41;IC=0;IMPRECISE;IQ=0.00;PARID=gridss286_41h;RAS=1;RASQ=0.00;REF=11;REFPAIR=0;RP=3;RPQ=63.87;SC=236M1X70N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.87:0.00:11:0:3:63.87:0:0.00:3
22	29118959	gridss286_41h	C	]22:29118810]C	63.87	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm286-450;BEIDH=0;BEIDL=237;BQ=38.90;BSC=2;BSCQ=38.90;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-63,63;CIRPOS=-35,36;CQ=63.87;EVENT=gridss286_41;IC=0;IMPRECISE;IQ=0.00;PARID=gridss286_41o;RAS=0;RASQ=0.00;REF=158;REFPAIR=9;RP=3;RPQ=63.87;SB=0.5;SC=1X125N1X181M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:38.90:2:38.90:0:0.00:2:0.00:0:0.00:63.87:0.00:158:9:3:63.87:0:0.00:3
22	29121326	gridss286_45o	T	T[22:29121398[	229.46	LOW_QUAL	AS=1;ASQ=125.44;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm286-193,asm286-461;BEIDH=2,295;BEIDL=0,0;BQ=39.84;BSC=2;BSCQ=39.84;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-6,7;CQ=229.46;EVENT=gridss286_45;IC=0;IMPRECISE;IQ=0.00;PARID=gridss286_45h;RAS=1;RASQ=0.00;REF=580;REFPAIR=33;RP=5;RPQ=104.03;SB=0.0;SC=294M1X12N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:125.44:6:0:0:0.00:0:0.00:0.00:0:0:39.84:2:39.84:0:0.00:2:0.00:0:0.00:229.46:0.00:580:33:5:104.03:0:0.00:6
22	29121398	gridss286_45h	G	]22:29121326]G	229.46	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm286-193,asm286-461;BEIDH=0,0;BEIDL=2,295;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-6,7;CQ=229.46;EVENT=gridss286_45;IC=0;IMPRECISE;IQ=0.00;PARID=gridss286_45o;RAS=1;RASQ=125.44;REF=392;REFPAIR=37;RP=5;RPQ=104.03;SC=1X12N1X242M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:229.46:125.44:392:37:5:104.03:0:0.00:6
22	42017312	gridss287_2o	C	C[22:42017475[	105.93	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.38;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm287-13;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-39,39;CQ=105.93;EVENT=gridss287_2;IC=0;IMPRECISE;IQ=0.00;PARID=gridss287_2h;RAS=0;RASQ=0.00;REF=431;REFPAIR=24;RP=2;RPQ=42.55;SC=101M28D100M1X77N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.38:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:105.93:0.00:431:24:2:42.55:0:0.00:3
22	42017475	gridss287_2h	A	]22:42017312]A	105.93	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm287-13;BEIDH=0;BEIDL=2;BQ=18.68;BSC=1;BSCQ=18.68;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-39,39;CQ=105.93;EVENT=gridss287_2;IC=0;IMPRECISE;IQ=0.00;PARID=gridss287_2o;RAS=1;RASQ=63.38;REF=236;REFPAIR=23;RP=2;RPQ=42.55;SB=0.0;SC=1X77N1X192M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:18.68:1:18.68:0:0.00:1:0.00:0:0.00:105.93:63.38:236:23:2:42.55:0:0.00:3
X	14863182	gridss290_5o	C	C[X:14863272[	211.26	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=105.63;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm290-15;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=0,1;CQ=211.26;EVENT=gridss290_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss290_5h;RAS=0;RASQ=0.00;REF=416;REFPAIR=39;RP=5;RPQ=105.63;SC=305M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.63:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:211.26:0.00:416:39:5:105.63:0:0.00:5
X	14863272	gridss290_5h	T	]X:14863182]T	211.26	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm290-15;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=0,1;CQ=211.26;EVENT=gridss290_5;IC=0;IMPRECISE;IQ=0.00;PARID=gridss290_5o;RAS=1;RASQ=105.63;REF=423;REFPAIR=25;RP=5;RPQ=105.63;SC=2X265M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:211.26:105.63:423:25:5:105.63:0:0.00:5
X	14882854	gridss290_8o	G	G[X:14882971[	63.79	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.31;BSC=1;BSCQ=19.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-15,15;CQ=63.79;EVENT=gridss290_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss290_8h;RAS=0;RASQ=0.00;REF=491;REFPAIR=45;RP=3;RPQ=63.79;SB=0.0;SC=101M40D150M1X15N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.31:1:19.31:0:0.00:1:0.00:0:0.00:63.79:0.00:491:45:3:63.79:0:0.00:3
X	14882971	gridss290_8h	T	]X:14882854]T	63.79	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=22.41;BSC=1;BSCQ=22.41;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,15;CIRPOS=-8,8;CQ=63.79;EVENT=gridss290_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss290_8o;RAS=0;RASQ=0.00;REF=341;REFPAIR=25;RP=3;RPQ=63.79;SB=1.0;SC=1X29N1X88M21D168M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:22.41:1:22.41:0:0.00:1:0.00:0:0.00:63.79:0.00:341:25:3:63.79:0:0.00:3
X	124689714	gridss301_3h	T	TCATTTTTGGGGGTGAGAACATTTAAAATT[X:124689714[	97	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=70.00;ASRP=0;ASSR=5;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm301-1;BEIDH=108;BEIDL=0;BQ=170.62;BSC=7;BSCQ=170.62;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=97.00;EVENT=gridss301_3;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss301_3o;RAS=0;RASQ=0.00;REF=117;REFPAIR=8;RP=0;RPQ=0.00;SB=0.5;SC=78M1X;SR=1;SRQ=27.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:70.00:0:5:0:0.00:0:0.00:0.00:0:0:170.62:7:170.62:0:0.00:3:0.00:0:0.00:97.00:0.00:117:8:0:0.00:1:27.00:5
X	124689714	gridss301_3o	T	]X:124689714]CATTTTTGGGGGTGAGAACATTTAAAATTT	97	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=5;BA=0;BANRP=0;BANRPQ=0.00;BANSR=1;BANSRQ=27.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm301-1;BEIDH=0;BEIDL=108;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=97.00;EVENT=gridss301_3;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss301_3h;RAS=1;RASQ=70.00;REF=115;REFPAIR=10;RP=0;RPQ=0.00;SB=0.5555556;SC=1X30M;SR=1;SRQ=27.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:5:0:0.00:1:27.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:97.00:70.00:115:10:0:0.00:1:27.00:5
X	154300571	gridss304_4o	C	C[X:154300707[	167.88	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=83.94;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-52;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-4,4;CQ=167.88;EVENT=gridss304_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_4h;RAS=0;RASQ=0.00;REF=582;REFPAIR=49;RP=4;RPQ=83.94;SC=299M1X7N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:83.94:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:167.88:0.00:582:49:4:83.94:0:0.00:4
X	154300707	gridss304_4h	A	]X:154300571]A	167.88	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-52;BEIDH=0;BEIDL=2;BQ=26.82;BSC=1;BSCQ=26.82;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-4,4;CQ=167.88;EVENT=gridss304_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_4o;RAS=1;RASQ=83.94;REF=590;REFPAIR=47;RP=4;RPQ=83.94;SB=1.0;SC=1X7N1X168M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:26.82:1:26.82:0:0.00:1:0.00:0:0.00:167.88:83.94:590:47:4:83.94:0:0.00:4
X	154303567	gridss304_375b	C	.AATGCTAAGCCCACTCTTTCCCCTGAAACTCTTGTACCATTTCATTGTTCTGGTTTTGCCTTCTTTGTCTTCCTC	5128.68	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=2553.52;BASRP=0;BASSR=109;BEID=asm304-287;BEIDH=-1;BEIDL=74;BQ=5128.68;BSC=110;BSCQ=2575.16;BUM=0;BUMQ=0.00;BVF=93;CAS=0;CASQ=0.00;CQ=5082.01;EVENT=gridss304_375;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=471;REFPAIR=38;RP=0;RPQ=0.00;SB=0.5890411;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:2553.52:0:109:5128.68:110:2575.16:0:0.00:93:0.00:0:0.00:0.00:0.00:471:38:0:0.00:0:0.00:0
X	154303571	gridss304_121b	G	GAAACTCTTGTACCATTTCATTGTTCTGGTTTTGCCTTCTTTGTCTTCCTCCCTGGCCCTTCTTGTTCTTCCCCAC.	5007.94	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=2462.11;BASRP=0;BASSR=98;BEID=asm304-8;BEIDH=-1;BEIDL=0;BQ=5007.94;BSC=101;BSCQ=2545.83;BUM=0;BUMQ=0.00;BVF=88;CAS=0;CASQ=0.00;CQ=4931.72;EVENT=gridss304_121;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=522;REFPAIR=48;RP=0;RPQ=0.00;SB=0.5678392;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:2462.11:0:98:5007.94:101:2545.83:0:0.00:88:0.00:0:0.00:0.00:0.00:522:48:0:0.00:0:0.00:0
X	154306851	gridss304_17o	A	A[X:154306923[	230.89	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=146.68;ASRP=7;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-92;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=230.89;EVENT=gridss304_17;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_17h;RAS=0;RASQ=0.00;REF=470;REFPAIR=31;RP=4;RPQ=84.21;SC=234M63D1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:146.68:7:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:230.89:0.00:470:31:4:84.21:0:0.00:7
X	154306923	gridss304_17h	A	]X:154306851]A	230.89	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=7;ASSR=0;BA=0;BANRP=4;BANRPQ=84.21;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-92;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-5,5;CQ=230.89;EVENT=gridss304_17;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_17o;RAS=1;RASQ=146.68;REF=566;REFPAIR=44;RP=4;RPQ=84.21;SC=1X9N1X336M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:7:0:4:84.21:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:230.89:146.68:566:44:4:84.21:0:0.00:7
X	154306982	gridss304_21o	A	A[X:154307054[	83.77	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=62.48;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-7,8;CQ=105.06;EVENT=gridss304_21;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_21h;RAS=0;RASQ=0.00;REF=491;REFPAIR=37;RP=4;RPQ=83.77;SC=229M1X13N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:62.48:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:83.77:0.00:491:37:4:83.77:0:0.00:4
X	154307054	gridss304_21h	T	]X:154306982]T	83.77	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=4;BANRPQ=83.77;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=23.56;BSC=1;BSCQ=23.56;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-7,7;CQ=105.06;EVENT=gridss304_21;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_21o;RAS=0;RASQ=0.00;REF=202;REFPAIR=12;RP=4;RPQ=83.77;SB=0.0;SC=1X14N1X51D241M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:4:83.77:0:0.00:0.00:0:0:23.56:1:23.56:0:0.00:1:0.00:0:0.00:83.77:0.00:202:12:4:83.77:0:0.00:4
X	154308677	gridss304_24o	C	C[X:154308713[	62.95	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-6,7;CQ=62.95;EVENT=gridss304_24;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_24h;RAS=0;RASQ=0.00;REF=203;REFPAIR=9;RP=3;RPQ=62.95;SC=182M31D100M1X25N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:62.95:0.00:203:9:3:62.95:0:0.00:3
X	154308713	gridss304_24h	G	]X:154308677]G	62.95	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=23.48;BSC=1;BSCQ=23.48;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-13,13;CQ=62.95;EVENT=gridss304_24;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_24o;RAS=0;RASQ=0.00;REF=155;REFPAIR=18;RP=3;RPQ=62.95;SB=0.0;SC=1X12N1X19M1D49M10D101M13D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:23.48:1:23.48:0:0.00:0:0.00:0:0.00:62.95:0.00:155:18:3:62.95:0:0.00:3
X	154310409	gridss304_29o	C	C[X:154310449[	83.96	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-4,5;CQ=83.96;EVENT=gridss304_29;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_29h;RAS=0;RASQ=0.00;REF=181;REFPAIR=14;RP=4;RPQ=83.96;SC=265M1X41N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:83.96:0.00:181:14:4:83.96:0:0.00:4
X	154310449	gridss304_29h	C	]X:154310409]C	83.96	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-21,21;CQ=83.96;EVENT=gridss304_29;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_29o;RAS=0;RASQ=0.00;REF=258;REFPAIR=16;RP=4;RPQ=83.96;SC=1X8N1X139M25D134M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:83.96:0.00:258:16:4:83.96:0:0.00:4
X	154315453	gridss304_34o	G	G[X:154315549[	63.38	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-30,30;CQ=63.38;EVENT=gridss304_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_34h;RAS=0;RASQ=0.00;REF=365;REFPAIR=23;RP=3;RPQ=63.38;SC=198M8D100M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.38:0.00:365:23:3:63.38:0:0.00:3
X	154315549	gridss304_34h	C	]X:154315453]C	63.38	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=58.79;BSC=3;BSCQ=58.79;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-30,30;CIRPOS=0,1;CQ=63.38;EVENT=gridss304_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_34o;RAS=0;RASQ=0.00;REF=344;REFPAIR=32;RP=3;RPQ=63.38;SB=0.0;SC=1X59N1X109M37D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:58.79:3:58.79:0:0.00:3:0.00:0:0.00:63.38:0.00:344:32:3:63.38:0:0.00:3
X	154318832	gridss304_40o	T	T[X:154318943[	212.31	LOW_QUAL	AS=1;ASQ=85.28;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-188,asm304-462;BEIDH=2,170;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-10,10;CIRPOS=-10,11;CQ=212.31;EVENT=gridss304_40;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_40h;RAS=1;RASQ=0.00;REF=738;REFPAIR=52;RP=6;RPQ=127.02;SC=101M33D157M1X19N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:85.28:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:212.31:0.00:738:52:6:127.02:0:0.00:6
X	154318943	gridss304_40h	A	]X:154318832]A	212.31	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-188,asm304-462;BEIDH=0,0;BEIDL=2,170;BQ=25.03;BSC=1;BSCQ=25.03;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-10,10;CQ=212.31;EVENT=gridss304_40;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_40o;RAS=1;RASQ=85.28;REF=612;REFPAIR=47;RP=6;RPQ=127.02;SB=0.0;SC=1X20N1X260M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:25.03:1:25.03:0:0.00:1:0.00:0:0.00:212.31:85.28:612:47:6:127.02:0:0.00:6
X	154319203	gridss304_44o	T	T[X:154319405[	105.74	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=63.07;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-189;BEIDH=2;BEIDL=0;BQ=108.23;BSC=5;BSCQ=108.23;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-40,40;CIRPOS=-40,40;CQ=105.74;EVENT=gridss304_44;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_44h;RAS=0;RASQ=0.00;REF=444;REFPAIR=30;RP=2;RPQ=42.67;SB=0.6;SC=101M33D93M1X79N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:63.07:3:0:0:0.00:0:0.00:0.00:0:0:108.23:5:108.23:0:0.00:4:0.00:0:0.00:105.74:0.00:444:30:2:42.67:0:0.00:3
X	154319405	gridss304_44h	T	]X:154319203]T	105.74	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-189;BEIDH=0;BEIDL=2;BQ=59.07;BSC=2;BSCQ=59.07;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-40,40;CIRPOS=-40,40;CQ=105.74;EVENT=gridss304_44;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_44o;RAS=1;RASQ=63.07;REF=451;REFPAIR=26;RP=2;RPQ=42.67;SB=0.0;SC=1X79N1X139M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:59.07:2:59.07:0:0.00:2:0.00:0:0.00:105.74:63.07:451:26:2:42.67:0:0.00:3
X	154344029	gridss304_47o	T	T[X:154344094[	83.18	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-521;BEIDH=277;BEIDL=0;BQ=19.97;BSC=1;BSCQ=19.97;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-25,26;CIRPOS=-17,17;CQ=83.18;EVENT=gridss304_47;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_47h;RAS=1;RASQ=0.00;REF=344;REFPAIR=29;RP=4;RPQ=83.18;SB=0.0;SC=256M1X50N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.97:1:19.97:0:0.00:1:0.00:0:0.00:83.18:0.00:344:29:4:83.18:0:0.00:4
X	154344094	gridss304_47h	T	]X:154344029]T	83.18	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-521;BEIDH=0;BEIDL=277;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-25,26;CQ=83.18;EVENT=gridss304_47;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_47o;RAS=0;RASQ=0.00;REF=345;REFPAIR=25;RP=4;RPQ=83.18;SC=1X33N1X273M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:83.18:0.00:345:25:4:83.18:0:0.00:4
X	154348599	gridss304_59o	A	A[X:154348790[	63.46	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=27.54;BSC=1;BSCQ=27.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-26,26;CQ=63.46;EVENT=gridss304_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_59h;RAS=0;RASQ=0.00;REF=430;REFPAIR=29;RP=3;RPQ=63.46;SB=0.0;SC=101M65D115M1X25N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:27.54:1:27.54:0:0.00:1:0.00:0:0.00:63.46:0.00:430:29:3:63.46:0:0.00:3
X	154348790	gridss304_59h	C	]X:154348599]C	63.46	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-13,13;CQ=63.46;EVENT=gridss304_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_59o;RAS=0;RASQ=0.00;REF=170;REFPAIR=20;RP=3;RPQ=63.46;SC=1X51N1X255M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.46:0.00:170:20:3:63.46:0:0.00:3
X	154348939	gridss304_62o	T	T[X:154349033[	125.28	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=62.64;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-263;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-21,22;CIRPOS=-19,20;CQ=167.89;EVENT=gridss304_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_62h;RAS=0;RASQ=0.00;REF=472;REFPAIR=41;RP=3;RPQ=62.64;SC=193M71D1X42N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:62.64:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.28:0.00:472:41:3:62.64:0:0.00:3
X	154349017	gridss304_64o	G	G[X:154349146[	168.77	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=84.38;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-262;BEIDH=2;BEIDL=0;BQ=64.95;BSC=3;BSCQ=64.95;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-47,47;CIRPOS=-47,47;CQ=168.77;EVENT=gridss304_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_64h;RAS=0;RASQ=0.00;REF=311;REFPAIR=23;RP=4;RPQ=84.38;SB=0.6666667;SC=101M8D104M1X93N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:84.38:4:0:0:0.00:0:0.00:0.00:0:0:64.95:3:64.95:0:0.00:3:0.00:0:0.00:168.77:0.00:311:23:4:84.38:0:0.00:4
X	154349033	gridss304_62h	G	]X:154348939]G	125.28	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=62.64;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-263;BEIDH=0;BEIDL=2;BQ=24.64;BSC=1;BSCQ=24.64;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-21,22;CQ=167.89;EVENT=gridss304_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_62o;RAS=1;RASQ=62.64;REF=346;REFPAIR=23;RP=3;RPQ=62.64;SB=1.0;SC=1X38N1X126M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:3:62.64:0:0.00:0.00:0:0:24.64:1:24.64:0:0.00:1:0.00:0:0.00:125.28:62.64:346:23:3:62.64:0:0.00:3
X	154349146	gridss304_64h	T	]X:154349017]T	168.77	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-262;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-47,47;CIRPOS=-47,47;CQ=168.77;EVENT=gridss304_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_64o;RAS=1;RASQ=84.38;REF=244;REFPAIR=20;RP=4;RPQ=84.38;SC=1X93N1X136M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:168.77:84.38:244:20:4:84.38:0:0.00:4


================================================
FILE: tests/AnnotSV/test_13_txFile/input/txFile.check1.txt
================================================
dddd NM_033486.2 lll
ENST00000341832


================================================
FILE: tests/AnnotSV/test_13_txFile/input/txFile.check2.txt
================================================
tutu	NM_001167738	tata


================================================
FILE: tests/AnnotSV/test_13_txFile/input/txFile.check3.txt
================================================
dddd NM_033486.2 lll
ENST00000341832


================================================
FILE: tests/AnnotSV/test_14_candidateGenesFile/5
================================================


================================================
FILE: tests/AnnotSV/test_14_candidateGenesFile/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


# -candidateGenesFile:            Path of a file containing the candidate genes of the user (gene names can be space-separated, tabulation-separated, or line-break-separated)
# -candidateGenesFiltering:       To select only the SV annotations ("split" and "full") overlapping a gene from the "candidateGenesFile"

# candidateGenesFile.txt:
# BBS5 CDK11A SSU72


# Run without the "-candidateGenesFiltering" option
###################################################

mkdir -p ./output
rm -f "./output/test.without_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test.without_tcl.annotated.tsv" -svtBEDcol 5 -candidateGenesFile "./input/candidateGenesFile.txt" -genomeBuild GRCh37

nLines_Without=`wc -l "./output/test.without_tcl.annotated.tsv" | cut -d" " -f 1`


# Run with the "-candidateGenesFiltering" option
################################################

rm -f "./output/test.with_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test.with_tcl.annotated.tsv" -svtBEDcol 5 -candidateGenesFile "./input/candidateGenesFile.txt" -candidateGenesFiltering 1 -genomeBuild GRCh37 

nLines_With=`wc -l "./output/test.with_tcl.annotated.tsv" | cut -d" " -f 1`

nBadLines_With=`$cut "./output/test.with_tcl.annotated.tsv" "AnnotSV_ID;Gene_name;Annotation_mode" | egrep -v "BBS5|CDK11A|SSU72" | wc -l`
# => Only the header line
# => $nBadLines_With == 1


# Check the line filtering
##########################
if [ $nLines_Without > $nLines_With ]
then
        echo "Ok"
else
        echo "error 1: the \"-candidateGenesFiltering\" option does not work"
        exit 1
fi

if [ $nBadLines_With == 1 ]
then
        echo "Ok"
else
        echo "error 1: the \"-candidateGenesFiltering\" option does not work"
        exit 1
fi


echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_14_candidateGenesFile/input/candidateGenesFile.txt
================================================
BBS5 CDK11A 
SSU72


================================================
FILE: tests/AnnotSV/test_14_candidateGenesFile/input/test.bed
================================================
#chrom	start	end	score	SV type
1	1490001	1530001	0222	DUP
1	1613810	1687739	0.25	DEL
1	94190001	95198431	0.001	DUP


================================================
FILE: tests/AnnotSV/test_15_EmptyVCF/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


# VCF input: 
# => contains header lines
# => do not contain variant

# => Error message in the output:
#    ############################################################################
#    SVinputFile (test.vcf is empty, no SV to annotate - Exit without error.
#    ############################################################################

mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv" "./output/test_tcl.log"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.vcf" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" &> "./output/test_tcl.log"

if [ `grep -c "SVinputFile (./input/test.vcf is empty, no SV to annotate - Exit without error." "./output/test_tcl.log"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: \"SVinputFile (test.vcf is empty, no SV to annotate - Exit without error.\" error message NOT found"
        exit 1
fi


echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_15_EmptyVCF/input/test.vcf
================================================
##fileformat=VCFv4.2
##ALT=<ID=INV,Description="Inversion">
##FILTER=<ID=ASSEMBLY_ONLY,Description="Variant is supported only by assembly evidence.">
##FILTER=<ID=ASSEMBLY_TOO_FEW_READ,Description="Not enough reads contribute to this assembly as specified by 'assembly.minReads'">
##FILTER=<ID=ASSEMBLY_TOO_SHORT,Description="This assembly is shorter than a read length">
##FILTER=<ID=INSUFFICIENT_SUPPORT,Description="Does not reach the required threshold quality for calling as specified by 'variantcalling.minScore'">
##FILTER=<ID=LOW_QUAL,Description="Low quality call as specified by 'variantcalling.lowQuality'">
##FILTER=<ID=NO_ASSEMBLY,Description="No assembly supporting this variant could be found.">
##FILTER=<ID=REF,Description="Breakpoint corresponds to reference allele">
##FILTER=<ID=SINGLE_ASSEMBLY,Description="Only one side of the breakpoint could be assembled.">
##FILTER=<ID=SINGLE_SUPPORT,Description="Supported by fewer than 'variantcalling.minReads' fragments">
##FILTER=<ID=SMALL_EVENT,Description="Event size is smaller than the minimum reportable size specified by 'variantcalling.minSize'">
##FORMAT=<ID=ASQ,Number=1,Type=Float,Description="Pro-rata quality score contribution of assemblies supporting breakpoint">
##FORMAT=<ID=ASRP,Number=1,Type=Integer,Description="Count of read pairs incorporated into any breakpoint assembly">
##FORMAT=<ID=ASSR,Number=1,Type=Integer,Description="Count of split, soft clipped or indel-containing reads incorporated into any breakpoint assemblies">
##FORMAT=<ID=BANRP,Number=1,Type=Integer,Description="Count of read pairs at this breakend assembled into a contig that does not support the breakpoint.">
##FORMAT=<ID=BANRPQ,Number=1,Type=Integer,Description="Quality score of read pairs at this breakend assembled into a contig that does not support the breakpoint.">
##FORMAT=<ID=BANSR,Number=1,Type=Integer,Description="Count of split reads at this breakend assembled into a contig that does not support the breakpoint.">
##FORMAT=<ID=BANSRQ,Number=1,Type=Integer,Description="Quality score of split reads at this breakend assembled into a contig that does not support the breakpoint.">
##FORMAT=<ID=BAQ,Number=1,Type=Float,Description="Pro-rata quality score contribution of assemblies supporting just local breakend">
##FORMAT=<ID=BASRP,Number=1,Type=Integer,Description="Count of read pairs incorporated into any breakend assembly">
##FORMAT=<ID=BASSR,Number=1,Type=Integer,Description="Count of split, soft clipped or indel-containing reads incorporated into any breakend assemblies">
##FORMAT=<ID=BQ,Number=1,Type=Float,Description="Quality score of breakend evidence after evidence reallocation">
##FORMAT=<ID=BSC,Number=1,Type=Integer,Description="Count of soft clips supporting just local breakend per category">
##FORMAT=<ID=BSCQ,Number=1,Type=Float,Description="Quality score of soft clips supporting just local breakend per category">
##FORMAT=<ID=BUM,Number=1,Type=Integer,Description="Count of read pairs (with one read unmapped) supporting just local breakend per category">
##FORMAT=<ID=BUMQ,Number=1,Type=Float,Description="Quality score of read pairs (with one read unmapped) supporting just local breakend per category">
##FORMAT=<ID=BVF,Number=1,Type=Integer,Description="Count of fragments providing breakend for the variant allele.">
##FORMAT=<ID=CASQ,Number=1,Type=Float,Description="Pro-rata quality score of complex compound breakpoint assemblies supporting breakpoint from elsewhere">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=IC,Number=1,Type=Integer,Description="Count of read indels supporting breakpoint per category">
##FORMAT=<ID=IQ,Number=1,Type=Float,Description="Quality score of read indels supporting breakpoint per category">
##FORMAT=<ID=QUAL,Number=1,Type=Float,Description="Quality score of breakend evidence after evidence reallocation">
##FORMAT=<ID=RASQ,Number=1,Type=Float,Description="Pro-rata quality score contribution of assemblies supporting breakpoint from remote breakend">
##FORMAT=<ID=REF,Number=1,Type=Integer,Description="Count of reads mapping across this breakend">
##FORMAT=<ID=REFPAIR,Number=1,Type=Integer,Description="Count of reference read pairs spanning this breakpoint supporting the reference allele">
##FORMAT=<ID=RF,Number=1,Type=Integer,Description="Reference fragments. Count of fragments suspporting the reference allele and not the variant allele.">
##FORMAT=<ID=RP,Number=1,Type=Integer,Description="Count of read pairs supporting breakpoint per category">
##FORMAT=<ID=RPQ,Number=1,Type=Float,Description="Quality score of read pairs supporting breakpoint per category">
##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Count of split reads supporting breakpoint per category">
##FORMAT=<ID=SRQ,Number=1,Type=Float,Description="Quality score of split reads supporting breakpoint per category">
##FORMAT=<ID=VF,Number=1,Type=Integer,Description="Count of fragments suspporting the variant breakpoint allele and not the reference allele.">
##INFO=<ID=AS,Number=1,Type=Integer,Description="Count of assemblies supporting breakpoint">
##INFO=<ID=ASQ,Number=1,Type=Float,Description="Quality score of assemblies supporting breakpoint">
##INFO=<ID=ASRP,Number=1,Type=Integer,Description="Count of read pairs incorporated into any breakpoint assembly">
##INFO=<ID=ASSR,Number=1,Type=Integer,Description="Count of split, soft clipped or indel-containing reads incorporated into any breakpoint assemblies">
##INFO=<ID=BA,Number=1,Type=Integer,Description="Count of assemblies supporting just local breakend">
##INFO=<ID=BANRP,Number=1,Type=Integer,Description="Count of read pairs at this breakend assembled into a contig that does not support the breakpoint.">
##INFO=<ID=BANRPQ,Number=1,Type=Integer,Description="Quality score of read pairs at this breakend assembled into a contig that does not support the breakpoint.">
##INFO=<ID=BANSR,Number=1,Type=Integer,Description="Count of split reads at this breakend assembled into a contig that does not support the breakpoint.">
##INFO=<ID=BANSRQ,Number=1,Type=Integer,Description="Quality score of split reads at this breakend assembled into a contig that does not support the breakpoint.">
##INFO=<ID=BAQ,Number=1,Type=Float,Description="Quality score of assemblies supporting just local breakend">
##INFO=<ID=BASRP,Number=1,Type=Integer,Description="Count of read pairs incorporated into any breakend assembly">
##INFO=<ID=BASSR,Number=1,Type=Integer,Description="Count of split, soft clipped or indel-containing reads incorporated into any breakend assemblies">
##INFO=<ID=BEALN,Number=.,Type=String,Description="Potential alignment locations of breakend sequence in the format chr:start|strand|cigar|mapq. Depending on the alignment information available, strand and mapq may be empty.">
##INFO=<ID=BEID,Number=.,Type=String,Description="Identifiers of assemblies supporting the variant.">
##INFO=<ID=BEIDH,Number=.,Type=Integer,Description="Remote chimeric alignment offset of corresponding BEID assembly.">
##INFO=<ID=BEIDL,Number=.,Type=Integer,Description="Local chimeric alignment offset of corresponding BEID assembly. ">
##INFO=<ID=BQ,Number=1,Type=Float,Description="Quality score of breakend evidence">
##INFO=<ID=BSC,Number=1,Type=Integer,Description="Count of soft clips supporting just local breakend">
##INFO=<ID=BSCQ,Number=1,Type=Float,Description="Quality score of soft clips supporting just local breakend">
##INFO=<ID=BUM,Number=1,Type=Integer,Description="Count of read pairs (with one read unmapped) supporting just local breakend">
##INFO=<ID=BUMQ,Number=1,Type=Float,Description="Quality score of read pairs (with one read unmapped) supporting just local breakend">
##INFO=<ID=BVF,Number=1,Type=Integer,Description="Count of fragments providing breakend for the variant allele.">
##INFO=<ID=CAS,Number=1,Type=Integer,Description="Count of complex compound breakpoint assemblies supporting breakpoint from elsewhere">
##INFO=<ID=CASQ,Number=1,Type=Float,Description="Quality score of complex compound breakpoint assemblies supporting breakpoint from elsewhere">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=CIRPOS,Number=2,Type=Integer,Description="Confidence interval around remote breakend POS for imprecise variants">
##INFO=<ID=CQ,Number=1,Type=Float,Description="Breakpoint quality score before evidence reallocation">
##INFO=<ID=END,Number=1,Type=Integer,Description="Stop position of the interval">
##INFO=<ID=EVENT,Number=1,Type=String,Description="ID of event associated to breakend">
##INFO=<ID=HOMLEN,Number=.,Type=Integer,Description="Length of base pair identical micro-homology at event breakpoints">
##INFO=<ID=HOMSEQ,Number=.,Type=String,Description="Sequence of base pair identical micro-homology at event breakpoints">
##INFO=<ID=IC,Number=1,Type=Integer,Description="Count of read indels supporting breakpoint">
##INFO=<ID=IHOMPOS,Number=2,Type=Integer,Description="Position of inexact homology">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=IQ,Number=1,Type=Float,Description="Quality score of read indels supporting breakpoint">
##INFO=<ID=PARID,Number=1,Type=String,Description="ID of partner breakend">
##INFO=<ID=RAS,Number=1,Type=Integer,Description="Count of assemblies supporting breakpoint from remote breakend">
##INFO=<ID=RASQ,Number=1,Type=Float,Description="Quality score of assemblies supporting breakpoint from remote breakend">
##INFO=<ID=REF,Number=1,Type=Integer,Description="Count of reads mapping across this breakend">
##INFO=<ID=REFPAIR,Number=1,Type=Integer,Description="Count of reference read pairs spanning this breakpoint supporting the reference allele">
##INFO=<ID=RF,Number=1,Type=Integer,Description="Reference fragments. Count of fragments suspporting the reference allele and not the variant allele.">
##INFO=<ID=RP,Number=1,Type=Integer,Description="Count of read pairs supporting breakpoint">
##INFO=<ID=RPQ,Number=1,Type=Float,Description="Quality score of read pairs supporting breakpoint">
##INFO=<ID=RSI,Number=.,Type=Integer,Description="Support interval offsets of partner breakend.">
##INFO=<ID=SB,Number=1,Type=Float,Description="Strand bias of the reads supporting the variant.1 indicates that reads would be aligned to the positive strand if the reference was changed to the variant allele. 0 indicates that reads bases would be aligned to the negative strand if the reference was changed to the variant allele. Strand bias is calculated purely from supporting reads and exclude read pair support since these are 100% strand bias. Note that reads both directly supporting the variant, and supporting via assembly will be double-counted. Both breakpoint and breakend supporting reads are included.">
##INFO=<ID=SC,Number=1,Type=String,Description="CIGAR for displaying anchoring alignment of any contributing evidence and microhomologies.">
##INFO=<ID=SELF,Number=0,Type=Flag,Description="Indicates a breakpoint is self-intersecting">
##INFO=<ID=SI,Number=.,Type=Integer,Description="Support interval offsets from breakend position in which at least one supporting read/read pair/assembly is mapped.">
##INFO=<ID=SR,Number=1,Type=Integer,Description="Count of split reads supporting breakpoint">
##INFO=<ID=SRQ,Number=1,Type=Float,Description="Quality score of split reads supporting breakpoint">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=VF,Number=1,Type=Integer,Description="Count of fragments suspporting the variant breakpoint allele and not the reference allele.">
##contig=<ID=1,length=249250621>
##contig=<ID=2,length=243199373>
##contig=<ID=3,length=198022430>
##contig=<ID=4,length=191154276>
##contig=<ID=5,length=180915260>
##contig=<ID=6,length=171115067>
##contig=<ID=7,length=159138663>
##contig=<ID=8,length=146364022>
##contig=<ID=9,length=141213431>
##contig=<ID=10,length=135534747>
##contig=<ID=11,length=135006516>
##contig=<ID=12,length=133851895>
##contig=<ID=13,length=115169878>
##contig=<ID=14,length=107349540>
##contig=<ID=15,length=102531392>
##contig=<ID=16,length=90354753>
##contig=<ID=17,length=81195210>
##contig=<ID=18,length=78077248>
##contig=<ID=19,length=59128983>
##contig=<ID=20,length=63025520>
##contig=<ID=21,length=48129895>
##contig=<ID=22,length=51304566>
##contig=<ID=X,length=155270560>
##contig=<ID=Y,length=59373566>
##contig=<ID=MT,length=16569>
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample_id


================================================
FILE: tests/AnnotSV/test_16_reciprocalYes/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail

cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


# -reciprocal:   Use of a reciprocal overlap between SV and user features (only for annotations with features overlapping the SV)
#                Values: 0 (default) or 1
#                <=> Only for custom SVincludedInFt annotations
#
# NOTE: It is to notice that, for pathogenic SV annotations, a reciprocal overlap cannot be used. The “-reciprocal” option can only be used with custom annotations with features overlapping the SV.
# NOTE: It is to notice that, for benign SV annotations, a reciprocal overlap cannot be used. The “-reciprocal” option can only be used with custom annotations with features overlapping the SV.
#
# Custom annotations:
# - By placing the BED file in the “SVincludedInFt” directory, only the features overlapping 100% of the SV will be reported.
# In this case, a reciprocal overlap can be used (see "reciprocal" option in USAGE/OPTIONS).


cp "./input/user_SVincludedInFt.bed" $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/SVincludedInFt/


# Checks of the "-reciprocal 0" and "-overlap 80" options with a BED input file:
################################################################################

mkdir -p ./output
rm -f "./output/testBED_tcl.annotated.reciprocalNo.Overlap80.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/testBED_tcl.annotated.reciprocalNo.Overlap80.tsv"  -svtBEDcol 4 -reciprocal 0 -overlap 80 -genomeBuild GRCh37
# => "SVincludedInFt" feature reported in the "BBBBBBBBBBBBBBBBBBBB" column

annotations=`$cut "./output/testBED_tcl.annotated.reciprocalNo.Overlap80.tsv" "BBBBBBBBBBBBBBBBBBBB" | sort -u`
annotations=`echo $annotations | sed "s/ /_/"`
if [ $annotations == "BBBBBBBBBBBBBBBBBBBB_SVincludedInFt" ]
then
        echo "Ok"
else
        echo "error 1: the \"-reciprocal\" option does not work"
        exit 1
fi



# Checks of the "-reciprocal 1" and "-overlap 80" options with a BED input file:
################################################################################

rm -f "./output/testBED_tcl.annotated.reciprocalYes.Overlap80.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/testBED_tcl.annotated.reciprocalYes.Overlap80.tsv" -svtBEDcol 4 -reciprocal 1 -overlap 80 -genomeBuild GRCh37
# => "SVincludedInFt" feature not reported in the "BBBBBBBBBBBBBBBBBBBB" column

annotations=`$cut "./output/testBED_tcl.annotated.reciprocalYes.Overlap80.tsv" "BBBBBBBBBBBBBBBBBBBB" | sort -u`

if [ $annotations == "BBBBBBBBBBBBBBBBBBBB" ]
then
        echo "Ok"
else
        echo "error 1: the \"-reciprocal\" option does not work"
        exit 1
fi



# Checks of the "-reciprocal 0" and "-overlap 80" options with a VCF input file:
################################################################################

rm -f "./output/testVCF_tcl.annotated.reciprocalNo.Overlap80.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.vcf" -SVinputInfo 1 -outputFile "./output/testVCF_tcl.annotated.reciprocalNo.Overlap80.tsv" -reciprocal 0 -overlap 80 -genomeBuild GRCh37
# => "SVincludedInFt" feature reported in the "BBBBBBBBBBBBBBBBBBBB" column

annotations=`$cut "./output/testVCF_tcl.annotated.reciprocalNo.Overlap80.tsv" "BBBBBBBBBBBBBBBBBBBB" | sort -u`
annotations=`echo $annotations | sed "s/ /_/"`

if [ $annotations == "BBBBBBBBBBBBBBBBBBBB_SVincludedInFt" ]
then
        echo "Ok"
else
        echo "error 1: the \"-reciprocal\" option does not work"
        exit 1
fi



# Checks of the "-reciprocal 1" and "-overlap 80" options with a VCF input file:
################################################################################

rm -f "./output/testVCF_tcl.annotated.reciprocalYes.Overlap80.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.vcf" -SVinputInfo 1 -outputFile "./output/testVCF_tcl.annotated.reciprocalYes.Overlap80.tsv" -reciprocal 1 -overlap 80 -genomeBuild GRCh37
# => "SVincludedInFt" feature not reported in the "BBBBBBBBBBBBBBBBBBBB" column

annotations=`$cut "./output/testVCF_tcl.annotated.reciprocalYes.Overlap80.tsv" "BBBBBBBBBBBBBBBBBBBB" | sort -u`

if [ $annotations == "BBBBBBBBBBBBBBBBBBBB" ]
then
        echo "Ok"
else
        echo "error 1: the \"-reciprocal\" option does not work"
        exit 1
fi



## Nettoyage :
##############
rm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/SVincludedInFt/user_SVincludedInFt.*




echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_16_reciprocalYes/input/test.bed
================================================
#chrom	start	end	tutu	SV type
1	2902537	3529849	ii	DEL


================================================
FILE: tests/AnnotSV/test_16_reciprocalYes/input/test.vcf
================================================
##fileformat=VCFv4.2
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample
1	2902537	.	N	<DEL>	72	PASS	END=3529849;SVTYPE=DEL	GT	1/1


================================================
FILE: tests/AnnotSV/test_16_reciprocalYes/input/user_SVincludedInFt.bed
================================================
#chrom	start	end	BBBBBBBBBBBBBBBBBBBB
1	1902537	4529849	SVincludedInFt


================================================
FILE: tests/AnnotSV/test_17_rankFiltering/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}



#########################################
# Check the "-rankFiltering" option
#########################################

# -> 1  3 4 5 (pas de 2)
mkdir -p ./output
rm -f "./output/test.1_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test.1_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37
for v in `$cut "./output/test.1_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 3 4 5 ACMG_class full=1 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with ./input/test.bed"
                echo "error 1"
                exit 1
        fi
done


# -> 1
rm -f "./output/test.2_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test.2_tcl.annotated.tsv" -svtBEDcol 4 -rankFiltering "1-2" -genomeBuild GRCh37
for v in `$cut "./output/test.2_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 ACMG_class full=1 full=2" " " "$v"
        then
                echo "Error with ./input/test.bed"
                echo "error 1"
                exit 1
        fi
done


# -> 1 3
rm -f "./output/test.3_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test.3_tcl.annotated.tsv" -svtBEDcol 4 -rankFiltering "1-3" -genomeBuild GRCh37
for v in `$cut "./output/test.3_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 3 ACMG_class full=1 full=3" " " "$v"
        then
                echo "Error with ./input/test.bed"
                echo "error 1"
                exit 1
        fi
done


# -> 1 3
rm -f "./output/test.4_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test.4_tcl.annotated.tsv" -svtBEDcol 4 -rankFiltering "1,2,3" -genomeBuild GRCh37
for v in `$cut "./output/test.4_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 3 ACMG_class full=1 full=3" " " "$v"
        then
                echo "Error with ./input/test.bed"
                echo "error 1"
                exit 1
        fi
done


# -> 1 3 4
rm -f "./output/test.5_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test.5_tcl.annotated.tsv" -svtBEDcol 4 -rankFiltering "1,2-4" -genomeBuild GRCh37
for v in `$cut "./output/test.5_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 3 4 ACMG_class full=1 full=3 full=4" " " "$v"
        then
                echo "Error with ./input/test.bed"
                echo "error 1"
                exit 1
        fi
done



echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_17_rankFiltering/input/test.bed
================================================
chrom	start	end	svtype
1	3995268	3995269	ALU;TSD=null
1	6438160	6445897	DEL
1	8200707	8211256	DUP
1	17263114	17273513	CNV
1	17676165	17677662	DEL
11	66287088	66288847	DEL
X	6595308	7515400	DEL
X	8786514	8788914	DEL


================================================
FILE: tests/AnnotSV/test_18_VCFwithBrackets/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail

cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


# The square-bracketed nomenclature ("[[") is used for DEL, DUP, INV, TRA.
# Ex: 
# => Deletion:
# 	1       11099650        .       N       N[1:11101794[     END=11101794;CHR2=1;SVTYPE=DEL;SVLEN=2144
# => Translocation:
# 	1       23224424        .       N       N]6:91004428]     END=91004428;CHR2=6;SVTYPE=TRA;

# AnnotSV must be able to annotate DEL, DUP and INV in their entirety; and the TRA only at the breakend level.



## Checking of the "END" value:
###############################

# -> Check of the end for "TRA" (We should have "end = start" )
# -> Check of the end for the other SV type (end defined with END from INFO)

mkdir -p ./output
rm -f "./output/triplesvmerge.CI0_tcl.annotated.tsv" "./output/tutu.CI0"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/triplesvmerge.vcf" -SVinputInfo 1 -outputFile "./output/triplesvmerge.CI0_tcl.annotated.tsv" -includeCI 0 -genomeBuild GRCh37

$cut "./output/triplesvmerge.CI0_tcl.annotated.tsv" "AnnotSV_ID;SV_type;Annotation_mode;SV_start;SV_end;INFO" | grep full > "./output/tutu.CI0"

test=`$ANNOTSV/tests/AnnotSV/scripts/check_end_values.tcl "./output/tutu.CI0"`

if [ $test == "Ok" ]
then
        echo "Ok"
else
        echo "error 1: END coordinates for bracketed SV not good"
        exit 1
fi




## Vérification avec l'option "-includeCI" à 1 :
################################################

# Si l'on laisse l'option "-includeCI" à 1, end != start+1 dans certains cas pour les TRA (logique !) : On aura $end-$start = $ciend-$cipos+1
# Ce VCF est un merge. On a 2 CIPOS : gridss_CIPOS et brass_CIPOS. Le code utilise le 1er trouvé dans la ligne.
rm -f "./output/triplesvmerge.CI1_tcl.annotated.tsv" "./output/tutu.CI1"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/triplesvmerge.vcf" -SVinputInfo 1 -outputFile "./output/triplesvmerge.CI1_tcl.annotated.tsv" -genomeBuild GRCh37

$cut "./output/triplesvmerge.CI1_tcl.annotated.tsv" "AnnotSV_ID;SV_type;Annotation_mode;SV_start;SV_end;INFO" | grep "TRA" | grep full > "./output/tutu.CI1"

test=`$ANNOTSV/tests/AnnotSV/scripts/check_includeCI.tcl "./output/tutu.CI1"`

if [ $test == "Ok" ]
then
        echo "Ok"
else
        echo "error 1: END coordinates for bracketed SV not good with -includeCI set to 1"
        exit 1
fi



# GRIDSS output:
# For each of both SV breakends, there are 2 annotation lines:
# 1       11734839        gridss1_4o      C       C[1:11734958[  
# 1       11734958        gridss1_4h      C       ]1:11734839]C  
#################################################################

#$ANNOTSV/bin/AnnotSV -SVinputFile ./input/INPUT_gridss_germline_output.sv.vcf  -SVinputInfo 1 -outputFile ./output/OUTPUT_gridss_germline.sv_tcl.annotated.tsv -genomeBuild GRCh37

# number of variants (SV + SNV/indel) in the input VCF:
#n_VCFinput=`grep -v "^#" ./input/INPUT_gridss_germline_output.sv.vcf | wc -l`
# n_VCFinput => 519

# number of variants in the AnnotSV output:
#n_output=`$cut ./output/OUTPUT_gridss_germline.sv_tcl.annotated.tsv "Annotation_mode" | grep -c full`
# n_output = 283

# number of unnanotated SNV/indel:
#n_nonannotated=`grep -c "< SVminSize " ./output/OUTPUT_gridss_germline.sv_tcl.unannotated.tsv`
# n_nonannotated = 242

#test=`expr $n_output + $n_nonannotated`


echo "ok - Finished"




================================================
FILE: tests/AnnotSV/test_18_VCFwithBrackets/input/INPUT_gridss_germline_output.sv.vcf
================================================
##fileformat=VCFv4.2
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sampleTest
1	11734839	gridss1_4o	C	C[1:11734958[	53.42	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-50,50;CQ=53.42;EVENT=gridss1_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss1_4h;RAS=0;RASQ=0.00;REF=76;REFPAIR=5;RP=3;RPQ=53.42;SC=101M90D116M1X18N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.42:0.00:76:5:3:53.42:0:0.00:3
1	11734958	gridss1_4h	C	]1:11734839]C	53.42	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-50,50;CIRPOS=-9,10;CQ=53.42;EVENT=gridss1_4;IC=0;IMPRECISE;IQ=0.00;PARID=gridss1_4o;RAS=0;RASQ=0.00;REF=34;REFPAIR=2;RP=3;RPQ=53.42;SC=1X99N1X226M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.42:0.00:34:2:3:53.42:0:0.00:3
1	30859118	gridss3_12b	C	.GCCGAGACTGC	104.10	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=52.05;BASRP=0;BASSR=3;BEID=asm3-10;BEIDH=-1;BEIDL=10;BQ=104.10;BSC=3;BSCQ=52.05;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=104.10;EVENT=gridss3_12;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=4;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:52.05:0:3:104.10:3:52.05:0:0.00:3:0.00:0:0.00:0.00:0.00:4:0:0:0.00:0:0.00:0
1	111489913	gridss11_47b	A	AAAAAAAATAACCTGGGAAAACATAAACTAAAAGAAAAAAAAAAAACAAAAGGCA.	1184.75	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=312.93;BASRP=0;BASSR=15;BEID=asm11-8;BEIDH=-1;BEIDL=0;BQ=1184.75;BSC=41;BSCQ=871.82;BUM=0;BUMQ=0.00;BVF=41;CAS=0;CASQ=0.00;CQ=1037.16;EVENT=gridss11_47;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=219;REFPAIR=53;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:312.93:0:15:1184.75:41:871.82:0:0.00:41:0.00:0:0.00:0.00:0.00:219:53:0:0.00:0:0.00:0
1	111490186	gridss11_10o	C	C[1:111490310[	141.52	LOW_QUAL	AS=1;ASQ=70.76;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm11-217,asm11-66;BEIDH=151,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-31,31;CIRPOS=-31,31;CQ=141.52;EVENT=gridss11_10;IC=0;IMPRECISE;IQ=0.00;PARID=gridss11_10h;RAS=1;RASQ=0.00;REF=276;REFPAIR=23;RP=4;RPQ=70.76;SC=101M13D150M1X61N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:70.76:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:141.52:0.00:276:23:4:70.76:0:0.00:4
1	111490310	gridss11_10h	C	]1:111490186]C	141.52	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm11-217,asm11-66;BEIDH=0,0;BEIDL=151,2;BQ=48.03;BSC=2;BSCQ=48.03;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-31,31;CIRPOS=-31,31;CQ=141.52;EVENT=gridss11_10;IC=0;IMPRECISE;IQ=0.00;PARID=gridss11_10o;RAS=1;RASQ=70.76;REF=159;REFPAIR=16;RP=4;RPQ=70.76;SB=0.0;SC=1X61N1X183M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:48.03:2:48.03:0:0.00:2:0.00:0:0.00:141.52:70.76:159:16:4:70.76:0:0.00:4
1	226566940	gridss22_47o	C	[13:111590551[C	96.77	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,3;CIRPOS=0,3;CQ=96.77;EVENT=gridss22_47;HOMLEN=3;HOMSEQ=CAC;IC=0;IHOMPOS=-1,0;IQ=0.00;PARID=gridss22_47h;RAS=0;RASQ=0.00;REF=174;REFPAIR=10;RP=0;RPQ=0.00;SB=0.33333334;SC=1X2N1X32M;SR=3;SRQ=96.77;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:96.77:0.00:174:10:0:0.00:3:96.77:3
2	3960075	gridss25_41b	T	.TTTTTTTTTTTTTTTTTTTTTT	230.29	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=76.00;BASRP=0;BASSR=4;BEID=asm25-33;BEIDH=-1;BEIDL=21;BQ=230.29;BSC=8;BSCQ=154.29;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=154.47;EVENT=gridss25_41;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=113;REFPAIR=8;RP=0;RPQ=0.00;SB=0.083333336;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:76.00:0:4:230.29:8:154.29:0:0.00:8:0.00:0:0.00:0.00:0.00:113:8:0:0.00:0:0.00:0
2	17953336	gridss26_62o	T	T[2:17953369[	52.76	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,4;CIRPOS=-23,24;CQ=52.76;EVENT=gridss26_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_62h;RAS=0;RASQ=0.00;REF=382;REFPAIR=33;RP=3;RPQ=52.76;SC=101M99D119M1X6N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:52.76:0.00:382:33:3:52.76:0:0.00:3
2	17953369	gridss26_62h	T	]2:17953336]T	52.76	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=40.03;BSC=2;BSCQ=40.03;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-23,24;CIRPOS=-3,4;CQ=52.76;EVENT=gridss26_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_62o;RAS=0;RASQ=0.00;REF=398;REFPAIR=30;RP=3;RPQ=52.76;SB=0.5;SC=1X46N1X100M55D124M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:40.03:2:40.03:0:0.00:2:0.00:0:0.00:52.76:0.00:398:30:3:52.76:0:0.00:3
2	17956082	gridss26_67o	T	T[2:17956140[	53.17	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=649.39;BSC=30;BSCQ=649.39;BUM=0;BUMQ=0.00;BVF=29;CAS=0;CASQ=0.00;CIPOS=-27,27;CIRPOS=-12,13;CQ=53.17;EVENT=gridss26_67;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_67h;RAS=0;RASQ=0.00;REF=352;REFPAIR=26;RP=3;RPQ=53.17;SB=0.8666667;SC=101M65D106M1X53N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:649.39:30:649.39:0:0.00:29:0.00:0:0.00:53.17:0.00:352:26:3:53.17:0:0.00:3
2	17956140	gridss26_67h	C	]2:17956082]C	53.17	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-27,27;CQ=53.17;EVENT=gridss26_67;IC=0;IMPRECISE;IQ=0.00;PARID=gridss26_67o;RAS=0;RASQ=0.00;REF=278;REFPAIR=19;RP=3;RPQ=53.17;SC=1X24N1X100M39D162M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.17:0.00:278:19:3:53.17:0:0.00:3
2	17959732	gridss26_1055b	T	.CACATATGTATGTGTATCTATAT	685.65	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=333.49;BASRP=0;BASSR=18;BEID=asm26-1069;BEIDH=-1;BEIDL=22;BQ=685.65;BSC=19;BSCQ=352.16;BUM=0;BUMQ=0.00;BVF=17;CAS=0;CASQ=0.00;CQ=666.98;EVENT=gridss26_1055;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=36;REFPAIR=0;RP=0;RPQ=0.00;SB=0.7837838;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:333.49:0:18:685.65:19:352.16:0:0.00:17:0.00:0:0.00:0.00:0.00:36:0:0:0.00:0:0.00:0
2	28117646	gridss27_25o	C	C[2:28117716[	195.54	LOW_QUAL	AS=1;ASQ=88.83;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm27-317,asm27-71;BEIDH=158,2;BEIDL=0,0;BQ=21.40;BSC=1;BSCQ=21.40;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-11,11;CQ=195.54;EVENT=gridss27_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss27_25h;RAS=1;RASQ=0.00;REF=587;REFPAIR=71;RP=6;RPQ=106.71;SB=0.0;SC=101M47D157M1X27N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:88.83:5:0:0:0.00:0:0.00:0.00:0:0:21.40:1:21.40:0:0.00:1:0.00:0:0.00:195.54:0.00:587:71:6:106.71:0:0.00:6
2	28117716	gridss27_25h	T	]2:28117646]T	195.54	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm27-317,asm27-71;BEIDH=0,0;BEIDL=158,2;BQ=23.74;BSC=1;BSCQ=23.74;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-14,14;CQ=195.54;EVENT=gridss27_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss27_25o;RAS=1;RASQ=88.83;REF=477;REFPAIR=54;RP=6;RPQ=106.71;SB=1.0;SC=1X21N1X93M1D210M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:23.74:1:23.74:0:0.00:1:0.00:0:0.00:195.54:88.83:477:54:6:106.71:0:0.00:6
2	29372277	gridss27_422b	T	.TTTAATATATATTCTGCATTTTTT	164.87	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=72.07;BASRP=0;BASSR=4;BEID=asm27-401;BEIDH=-1;BEIDL=23;BQ=164.87;BSC=5;BSCQ=92.80;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=144.15;EVENT=gridss27_422;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=101;REFPAIR=6;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:72.07:0:4:164.87:5:92.80:0:0.00:5:0.00:0:0.00:0.00:0.00:101:6:0:0.00:0:0.00:0
2	39564894	gridss28_45b	T	.TTCTCTCATAACAAACCATGACATCCAGTCATTTAATACAATATGTCTGGGGTGGCTGGGCCCCTTTTTT	246.24	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=85.00;BASRP=0;BASSR=5;BEID=asm28-45;BEIDH=-1;BEIDL=69;BQ=246.24;BSC=6;BSCQ=161.24;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=246.24;EVENT=gridss28_45;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=20;REFPAIR=7;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:85.00:0:5:246.24:6:161.24:0:0.00:6:0.00:0:0.00:0.00:0.00:20:7:0:0.00:0:0.00:0
2	47600374	gridss29_460b	A	AAAAGGGAATAAAAAAAAAAAAAAAAATTTTTCCTAAAAAAAAAACAAAATTTTAAAAAATAAAA.	778.01	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=258.07;BASRP=0;BASSR=10;BEID=asm29-27;BEIDH=-1;BEIDL=0;BQ=778.01;BSC=20;BSCQ=519.95;BUM=0;BUMQ=0.00;BVF=20;CAS=0;CASQ=0.00;CQ=543.00;EVENT=gridss29_460;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=47;REFPAIR=20;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:258.07:0:10:778.01:20:519.95:0:0.00:20:0.00:0:0.00:0.00:0.00:47:20:0:0.00:0:0.00:0
2	47601276	gridss29_82o	G	G[2:47601315[	53.35	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=43.67;BSC=2;BSCQ=43.67;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-22,23;CIRPOS=-13,13;CQ=53.35;EVENT=gridss29_82;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_82h;RAS=0;RASQ=0.00;REF=244;REFPAIR=31;RP=3;RPQ=53.35;SB=0.5;SC=101M42D138M1X44N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:43.67:2:43.67:0:0.00:2:0.00:0:0.00:53.35:0.00:244:31:3:53.35:0:0.00:3
2	47601315	gridss29_82h	T	]2:47601276]T	53.35	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=40.46;BSC=2;BSCQ=40.46;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-22,23;CQ=53.35;EVENT=gridss29_82;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_82o;RAS=0;RASQ=0.00;REF=364;REFPAIR=27;RP=3;RPQ=53.35;SB=0.5;SC=1X25N1X100M93D107M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:40.46:2:40.46:0:0.00:2:0.00:0:0.00:53.35:0.00:364:27:3:53.35:0:0.00:3
2	47608532	gridss29_2255b	A	.GAGAAAACCCGATTAAAA	117.22	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=58.61;BASRP=0;BASSR=3;BEID=asm29-2060;BEIDH=-1;BEIDL=17;BQ=117.22;BSC=3;BSCQ=58.61;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=117.22;EVENT=gridss29_2255;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=29;REFPAIR=0;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:58.61:0:3:117.22:3:58.61:0:0.00:3:0.00:0:0.00:0.00:0.00:29:0:0:0.00:0:0.00:0
2	47635536	gridss29_723b	T	TTAAGGGGAAAAAAATTG.	249.57	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=76.47;BASRP=0;BASSR=4;BEID=asm29-377;BEIDH=-1;BEIDL=0;BQ=249.57;BSC=8;BSCQ=173.10;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=152.94;EVENT=gridss29_723;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=181;REFPAIR=20;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:76.47:0:4:249.57:8:173.10:0:0.00:8:0.00:0:0.00:0.00:0.00:181:20:0:0.00:0:0.00:0
2	47641563	gridss29_2505b	A	.AGTTTTTTTGTCTTTTCCTAATAAAAAAACATGGTAGGTGGAACAAAAGGCAACCAATAGCAAATTCTGTATA	132.72	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=55.15;BASRP=0;BASSR=2;BEID=asm29-2365;BEIDH=-1;BEIDL=72;BQ=132.72;BSC=3;BSCQ=77.58;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=177.17;EVENT=gridss29_2505;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=100;REFPAIR=40;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:55.15:0:2:132.72:3:77.58:0:0.00:3:0.00:0:0.00:0.00:0.00:100:40:0:0.00:0:0.00:0
2	47641583	gridss29_777b	A	AGGGTTAAAAATGT.	449.92	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=236.09;BASRP=1;BASSR=10;BEID=asm29-421,asm29-422;BEIDH=-1,-1;BEIDL=0,0;BQ=449.92;BSC=10;BSCQ=213.83;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=234.89;EVENT=gridss29_777;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=110;REFPAIR=25;RP=0;RPQ=0.00;SB=0.95;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:236.09:1:10:449.92:10:213.83:0:0.00:12:0.00:0:0.00:0.00:0.00:110:25:0:0.00:0:0.00:0
2	47652989	gridss29_916b	T	TGAGACAG.	255.41	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=84.39;BASRP=0;BASSR=5;BEID=asm29-532;BEIDH=-1;BEIDL=0;BQ=255.41;BSC=10;BSCQ=171.02;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=151.78;EVENT=gridss29_916;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=58;REFPAIR=9;RP=0;RPQ=0.00;SB=0.2;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:84.39:0:5:255.41:10:171.02:0:0.00:10:0.00:0:0.00:0.00:0.00:58:9:0:0.00:0:0.00:0
2	47654057	gridss29_124o	A	A[2:47654090[	88.32	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=17.67;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-2529;BEIDH=165;BEIDL=0;BQ=46.74;BSC=2;BSCQ=46.74;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-17,18;CIRPOS=-9,10;CQ=88.32;EVENT=gridss29_124;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_124h;RAS=1;RASQ=0.00;REF=298;REFPAIR=27;RP=5;RPQ=88.32;SB=1.0;SC=165M14D112M1X34N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:17.67:0:0.00:0.00:0:0:46.74:2:46.74:0:0.00:2:0.00:0:0.00:88.32:0.00:298:27:5:88.32:0:0.00:5
2	47654090	gridss29_124h	A	]2:47654057]A	88.32	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-2529;BEIDH=0;BEIDL=165;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-17,18;CQ=88.32;EVENT=gridss29_124;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_124o;RAS=0;RASQ=0.00;REF=271;REFPAIR=48;RP=5;RPQ=88.32;SC=1X18N1X168M15D124M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:88.32:0.00:271:48:5:88.32:0:0.00:5
2	47654136	gridss29_2629b	A	.GGTAGGCATCCTAATTAATCTCGA	171.64	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=137.87;BASRP=1;BASSR=7;BEID=asm29-531;BEIDH=-1;BEIDL=23;BQ=171.64;BSC=2;BSCQ=33.76;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=171.64;EVENT=gridss29_2629;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=220;REFPAIR=98;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:137.87:1:7:171.64:2:33.76:0:0.00:10:0.00:0:0.00:0.00:0.00:220:98:0:0.00:0:0.00:0
2	47659569	gridss29_997b	T	TGTTTTTT.	103.57	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=51.79;BASRP=0;BASSR=3;BEID=asm29-673;BEIDH=-1;BEIDL=0;BQ=103.57;BSC=3;BSCQ=51.79;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=103.57;EVENT=gridss29_997;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=116;REFPAIR=25;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:51.79:0:3:103.57:3:51.79:0:0.00:3:0.00:0:0.00:0.00:0.00:116:25:0:0.00:0:0.00:0
2	47672503	gridss29_156o	T	T[2:47672684[	177.45	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=88.73;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-852;BEIDH=2;BEIDL=0;BQ=34.55;BSC=2;BSCQ=34.55;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=0,1;CQ=159.70;EVENT=gridss29_156;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_156h;RAS=0;RASQ=0.00;REF=352;REFPAIR=49;RP=5;RPQ=88.73;SB=0.5;SC=101M112D112M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:88.73:5:0:0:0.00:0:0.00:0.00:0:0:34.55:2:34.55:0:0.00:1:0.00:0:0.00:177.45:0.00:352:49:5:88.73:0:0.00:5
2	47672684	gridss29_156h	T	]2:47672503]T	177.45	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=4;BANRPQ=70.76;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-852;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=0,1;CQ=159.70;EVENT=gridss29_156;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_156o;RAS=1;RASQ=88.73;REF=300;REFPAIR=39;RP=5;RPQ=88.73;SC=2X197M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:4:70.76:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:177.45:88.73:300:39:5:88.73:0:0.00:5
2	47673612	gridss29_2821b	T	.AAATTTCT	100.77	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=50.39;BASRP=0;BASSR=3;BEID=asm29-2705;BEIDH=-1;BEIDL=7;BQ=100.77;BSC=3;BSCQ=50.39;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=100.77;EVENT=gridss29_2821;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=204;REFPAIR=27;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:50.39:0:3:100.77:3:50.39:0:0.00:3:0.00:0:0.00:0.00:0.00:204:27:0:0.00:0:0.00:0
2	47690412	gridss29_2992b	C	.AAGCTGATGCCTCCACGTCCC	375.62	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=158.14;BASRP=0;BASSR=9;BEID=asm29-2940;BEIDH=-1;BEIDL=20;BQ=375.62;BSC=12;BSCQ=217.49;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=352.28;EVENT=gridss29_2992;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=464;REFPAIR=49;RP=0;RPQ=0.00;SB=0.5714286;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:158.14:0:9:375.62:12:217.49:0:0.00:12:0.00:0:0.00:0.00:0.00:464:49:0:0.00:0:0.00:0
2	47690611	gridss29_185o	A	A[2:47690661[	70.79	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=37.19;BSC=2;BSCQ=37.19;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-21,22;CIRPOS=-8,9;CQ=70.79;EVENT=gridss29_185;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_185h;RAS=0;RASQ=0.00;REF=343;REFPAIR=27;RP=4;RPQ=70.79;SB=0.0;SC=177M6D100M1X42N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:37.19:2:37.19:0:0.00:2:0.00:0:0.00:70.79:0.00:343:27:4:70.79:0:0.00:4
2	47690661	gridss29_185h	T	]2:47690611]T	70.79	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=52.93;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=104.46;BSC=5;BSCQ=104.46;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-21,22;CQ=70.79;EVENT=gridss29_185;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_185o;RAS=0;RASQ=0.00;REF=324;REFPAIR=33;RP=4;RPQ=70.79;SB=0.4;SC=1X16N1X178M30D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:52.93:0:0.00:0.00:0:0:104.46:5:104.46:0:0.00:4:0.00:0:0.00:70.79:0.00:324:33:4:70.79:0:0.00:4
2	47692269	gridss29_187o	T	T[2:47692360[	71.27	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=73.24;BSC=3;BSCQ=73.24;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-25,26;CIRPOS=-9,9;CQ=71.27;EVENT=gridss29_187;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_187h;RAS=0;RASQ=0.00;REF=469;REFPAIR=45;RP=4;RPQ=71.27;SB=0.33333334;SC=142M28D105M1X50N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:73.24:3:73.24:0:0.00:3:0.00:0:0.00:71.27:0.00:469:45:4:71.27:0:0.00:4
2	47692360	gridss29_187h	T	]2:47692269]T	71.27	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-25,26;CQ=71.27;EVENT=gridss29_187;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_187o;RAS=0;RASQ=0.00;REF=429;REFPAIR=56;RP=4;RPQ=71.27;SC=1X17N1X96M43D169M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:71.27:0.00:429:56:4:71.27:0:0.00:4
2	47698523	gridss29_194o	A	A[2:47698602[	88.73	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-3112;BEIDH=226;BEIDL=0;BQ=173.32;BSC=8;BSCQ=173.32;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CIPOS=-50,51;CIRPOS=-4,5;CQ=71.14;EVENT=gridss29_194;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_194h;RAS=1;RASQ=0.00;REF=479;REFPAIR=42;RP=5;RPQ=88.73;SB=0.625;SC=225M1X100N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:173.32:8:173.32:0:0.00:8:0.00:0:0.00:88.73:0.00:479:42:5:88.73:0:0.00:5
2	47698602	gridss29_194h	T	]2:47698523]T	88.73	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-3112;BEIDH=0;BEIDL=226;BQ=26.11;BSC=1;BSCQ=26.11;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-50,51;CQ=71.14;EVENT=gridss29_194;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_194o;RAS=0;RASQ=0.00;REF=476;REFPAIR=45;RP=5;RPQ=88.73;SB=1.0;SC=1X8N1X202M12D103M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:26.11:1:26.11:0:0.00:1:0.00:0:0.00:88.73:0.00:476:45:5:88.73:0:0.00:5
2	47702207	gridss29_197o	G	G[2:47702267[	158.41	LOW_QUAL	AS=1;ASQ=70.32;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1297,asm29-3249;BEIDH=62,144;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-4,4;CQ=158.41;EVENT=gridss29_197;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_197h;RAS=1;RASQ=0.00;REF=331;REFPAIR=34;RP=5;RPQ=88.10;SC=101M46D143M1X35N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:70.32:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:158.41:0.00:331:34:5:88.10:0:0.00:5
2	47702267	gridss29_197h	A	]2:47702207]A	158.41	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1297,asm29-3249;BEIDH=0,0;BEIDL=62,144;BQ=22.27;BSC=1;BSCQ=22.27;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-18,18;CQ=158.41;EVENT=gridss29_197;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_197o;RAS=1;RASQ=70.32;REF=369;REFPAIR=28;RP=5;RPQ=88.10;SB=0.0;SC=1X7N1X100M11D183M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:22.27:1:22.27:0:0.00:1:0.00:0:0.00:158.41:70.32:369:28:5:88.10:0:0.00:5
2	47702452	gridss29_3171b	T	.TTTTGTGTTTTTTTTTTTAAGTATATTAATTTTTCTTATTTTGTGAGGATTATTTTTTT	376.86	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=198.41;BASRP=0;BASSR=9;BEID=asm29-3126,asm29-3129;BEIDH=-1,-1;BEIDL=41,58;BQ=376.86;BSC=8;BSCQ=178.46;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=651.01;EVENT=gridss29_3171;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=198;REFPAIR=40;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:198.41:0:9:376.86:8:178.46:0:0.00:9:0.00:0:0.00:0.00:0.00:198:40:0:0.00:0:0.00:0
2	47702911	gridss29_201o	A	A[2:47702960[	70.44	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CQ=70.44;EVENT=gridss29_201;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_201h;RAS=0;RASQ=0.00;REF=321;REFPAIR=35;RP=4;RPQ=70.44;SC=139M75D111M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.44:0.00:321:35:4:70.44:0:0.00:4
2	47702960	gridss29_201h	C	]2:47702911]C	70.44	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIRPOS=0,1;CQ=70.44;EVENT=gridss29_201;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_201o;RAS=0;RASQ=0.00;REF=325;REFPAIR=41;RP=4;RPQ=70.44;SC=1X109M58D159M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.44:0.00:325:41:4:70.44:0:0.00:4
2	47705568	gridss29_210o	T	T[2:47705647[	229.37	LOW_QUAL	AS=2;ASQ=106.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1419,asm29-1421,asm29-3248;BEIDH=2,2,223;BEIDL=0,0,9;BQ=54.10;BSC=2;BSCQ=54.10;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-13,13;CQ=211.64;EVENT=gridss29_210;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_210h;RAS=1;RASQ=0.00;REF=552;REFPAIR=49;RP=7;RPQ=123.37;SB=0.5;SC=284M1X41N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.00:6:0:0:0.00:0:0.00:0.00:0:0:54.10:2:54.10:0:0.00:2:0.00:0:0.00:229.37:0.00:552:49:7:123.37:0:0.00:7
2	47705647	gridss29_210h	A	]2:47705568]A	229.37	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1419,asm29-1421,asm29-3248;BEIDH=0,0,9;BEIDL=2,2,223;BQ=99.81;BSC=5;BSCQ=99.81;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-21,21;CQ=211.64;EVENT=gridss29_210;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_210o;RAS=2;RASQ=106.00;REF=465;REFPAIR=51;RP=7;RPQ=123.37;SB=0.8;SC=1X25N1X239M;SR=0;SRQ=0.00;SVTYPE=BND;VF=7	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:99.81:5:99.81:0:0.00:5:0.00:0:0.00:229.37:106.00:465:51:7:123.37:0:0.00:7
2	47706710	gridss29_212o	A	A[2:47706772[	160.42	LOW_QUAL	AS=1;ASQ=71.36;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1417,asm29-3355;BEIDH=2,196;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-30,31;CQ=160.42;EVENT=gridss29_212;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_212h;RAS=1;RASQ=0.00;REF=396;REFPAIR=46;RP=5;RPQ=89.06;SC=196M28D100M1X1N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:71.36:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:160.42:0.00:396:46:5:89.06:0:0.00:5
2	47706772	gridss29_212h	T	]2:47706710]T	160.42	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1417,asm29-3355;BEIDH=0,0;BEIDL=2,196;BQ=35.29;BSC=2;BSCQ=35.29;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-30,31;CIRPOS=-1,1;CQ=160.42;EVENT=gridss29_212;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_212o;RAS=1;RASQ=71.36;REF=323;REFPAIR=30;RP=5;RPQ=89.06;SB=1.0;SC=1X60N1X139M25D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:35.29:2:35.29:0:0.00:2:0.00:0:0.00:160.42:71.36:323:30:5:89.06:0:0.00:5
2	47707920	gridss29_215o	C	C[2:47707955[	52.68	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=43.53;BSC=1;BSCQ=43.53;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-9,9;CQ=158.75;EVENT=gridss29_215;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_215h;RAS=0;RASQ=0.00;REF=491;REFPAIR=47;RP=3;RPQ=52.68;SB=1.0;SC=169M139D1X17N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:43.53:1:43.53:0:0.00:1:0.00:0:0.00:52.68:0.00:491:47:3:52.68:0:0.00:3
2	47707955	gridss29_215h	C	]2:47707920]C	52.68	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=97.72;BSC=5;BSCQ=97.72;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-9,9;CQ=158.75;EVENT=gridss29_215;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_215o;RAS=0;RASQ=0.00;REF=550;REFPAIR=45;RP=3;RPQ=52.68;SB=0.6;SC=1X17N1X138M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:97.72:5:97.72:0:0.00:5:0.00:0:0.00:52.68:0.00:550:45:3:52.68:0:0.00:3
2	47708030	gridss29_217o	T	T[2:47708093[	212.52	LOW_QUAL	AS=2;ASQ=106.26;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1418,asm29-1425,asm29-3354;BEIDH=2,2,233;BEIDL=0,0,0;BQ=193.56;BSC=10;BSCQ=193.56;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CIPOS=-43,44;CIRPOS=-16,16;CQ=212.52;EVENT=gridss29_217;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_217h;RAS=1;RASQ=0.00;REF=483;REFPAIR=42;RP=6;RPQ=106.26;SB=0.7;SC=239M1X86N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.26:6:0:0:0.00:0:0.00:0.00:0:0:193.56:10:193.56:0:0.00:8:0.00:0:0.00:212.52:0.00:483:42:6:106.26:0:0.00:6
2	47708093	gridss29_217h	T	]2:47708030]T	212.52	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-1418,asm29-1425,asm29-3354;BEIDH=0,0,0;BEIDL=2,2,233;BQ=44.90;BSC=2;BSCQ=44.90;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-43,44;CQ=212.52;EVENT=gridss29_217;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_217o;RAS=2;RASQ=106.26;REF=398;REFPAIR=47;RP=6;RPQ=106.26;SB=1.0;SC=1X31N1X288M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:44.90:2:44.90:0:0.00:2:0.00:0:0.00:212.52:106.26:398:47:6:106.26:0:0.00:6
2	47708960	gridss29_1645b	T	TTAGTTGGAGCATTCCTGTTTCTTTTGATTAATAAAAAAAAAAAACTTTTATTCCCA.	388.75	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=72.54;BASRP=0;BASSR=3;BEID=asm29-1314;BEIDH=-1;BEIDL=0;BQ=388.75;BSC=11;BSCQ=316.21;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=145.08;EVENT=gridss29_1645;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=37;REFPAIR=7;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:72.54:0:3:388.75:11:316.21:0:0.00:11:0.00:0:0.00:0.00:0.00:37:7:0:0.00:0:0.00:0
2	48017555	gridss29_232o	A	A[2:48017632[	70.55	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-3521;BEIDH=102;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-32,32;CQ=70.55;EVENT=gridss29_232;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_232h;RAS=1;RASQ=0.00;REF=186;REFPAIR=16;RP=4;RPQ=70.55;SC=101M69D124M1X31N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.55:0.00:186:16:4:70.55:0:0.00:4
2	48017632	gridss29_232h	T	]2:48017555]T	70.55	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-3521;BEIDH=0;BEIDL=102;BQ=80.91;BSC=3;BSCQ=80.91;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-16,16;CQ=70.55;EVENT=gridss29_232;IC=0;IMPRECISE;IQ=0.00;PARID=gridss29_232o;RAS=0;RASQ=0.00;REF=264;REFPAIR=20;RP=4;RPQ=70.55;SB=0.33333334;SC=1X63N1X262M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:80.91:3:80.91:0:0.00:3:0.00:0:0.00:70.55:0.00:264:20:4:70.55:0:0.00:4
2	48028525	gridss29_1942b	T	TTTTTAGTAATGTTTTTTTTTTTTTT.	142.87	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=54.36;BASRP=0;BASSR=3;BEID=asm29-1672;BEIDH=-1;BEIDL=0;BQ=142.87;BSC=5;BSCQ=88.52;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=142.87;EVENT=gridss29_1942;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=42;REFPAIR=11;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:54.36:0:3:142.87:5:88.52:0:0.00:5:0.00:0:0.00:0.00:0.00:42:11:0:0.00:0:0.00:0
2	48032741	gridss29_3681b	T	.CAATATGAGTTTGCTTTTTTTATTT	168.03	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=54.58;BASRP=0;BASSR=3;BEID=asm29-3734;BEIDH=-1;BEIDL=24;BQ=168.03;BSC=6;BSCQ=113.45;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=109.16;EVENT=gridss29_3681;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=225;REFPAIR=40;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:54.58:0:3:168.03:6:113.45:0:0.00:6:0.00:0:0.00:0.00:0.00:225:40:0:0.00:0:0.00:0
2	48033876	gridss29_3713b	A	.GGAAGGGATAATACAATAAA	225.91	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=38.88;BASRP=0;BASSR=2;BEID=asm29-3761;BEIDH=-1;BEIDL=19;BQ=225.91;BSC=8;BSCQ=187.03;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=203.64;EVENT=gridss29_3713;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=125;REFPAIR=21;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:38.88:0:2:225.91:8:187.03:0:0.00:8:0.00:0:0.00:0.00:0.00:125:21:0:0.00:0:0.00:0
2	58387089	gridss30_12o	T	T[2:58387172[	53.72	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-18,18;CQ=53.72;EVENT=gridss30_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss30_12h;RAS=0;RASQ=0.00;REF=24;REFPAIR=4;RP=3;RPQ=53.72;SC=101M49D135M1X40N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.72:0.00:24:4:3:53.72:0:0.00:3
2	58387172	gridss30_12h	A	]2:58387089]A	53.72	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=44.20;BSC=2;BSCQ=44.20;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-20,21;CQ=53.72;EVENT=gridss30_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss30_12o;RAS=0;RASQ=0.00;REF=142;REFPAIR=5;RP=3;RPQ=53.72;SB=0.5;SC=1X35N1X100M44D146M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:44.20:2:44.20:0:0.00:2:0.00:0:0.00:53.72:0.00:142:5:3:53.72:0:0.00:3
2	95849384	gridss34_21b	T	TTTTTGAAAGAGGGTC.	439.34	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=168.39;BASRP=0;BASSR=9;BEID=asm34-11;BEIDH=-1;BEIDL=0;BQ=439.34;BSC=14;BSCQ=270.95;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=361.76;EVENT=gridss34_21;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=45;REFPAIR=6;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:168.39:0:9:439.34:14:270.95:0:0.00:15:0.00:0:0.00:0.00:0.00:45:6:0:0.00:0:0.00:0
2	152296509	gridss40_235b	A	AAAAAAAATTAAACCCTTATTTTTGATTTTTGAAAGGAAAAAAAAAAAAAAACCCATTTTTTAAAG.	956.35	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=441.58;BASRP=0;BASSR=16;BEID=asm40-88;BEIDH=-1;BEIDL=0;BQ=956.35;BSC=19;BSCQ=514.77;BUM=0;BUMQ=0.00;BVF=19;CAS=0;CASQ=0.00;CQ=883.17;EVENT=gridss40_235;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=53;REFPAIR=20;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:441.58:0:16:956.35:19:514.77:0:0.00:19:0.00:0:0.00:0.00:0.00:53:20:0:0.00:0:0.00:0
2	152325022	gridss40_69o	C	C[2:152325085[	53.25	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.80;BSC=1;BSCQ=19.80;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-19,19;CIRPOS=-5,5;CQ=53.25;EVENT=gridss40_69;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_69h;RAS=0;RASQ=0.00;REF=375;REFPAIR=41;RP=3;RPQ=53.25;SB=1.0;SC=101M48D139M1X37N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.80:1:19.80:0:0.00:1:0.00:0:0.00:53.25:0.00:375:41:3:53.25:0:0.00:3
2	152325085	gridss40_69h	T	]2:152325022]T	53.25	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=39.42;BSC=2;BSCQ=39.42;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-19,19;CQ=53.25;EVENT=gridss40_69;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_69o;RAS=0;RASQ=0.00;REF=449;REFPAIR=39;RP=3;RPQ=53.25;SB=0.5;SC=1X9N1X100M13D101M1D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:39.42:2:39.42:0:0.00:2:0.00:0:0.00:53.25:0.00:449:39:3:53.25:0:0.00:3
2	152332687	gridss40_73o	G	G[2:152332811[	143.49	LOW_QUAL	AS=1;ASQ=71.74;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm40-1000,asm40-413;BEIDH=133,2;BEIDL=0,0;BQ=19.08;BSC=1;BSCQ=19.08;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-54,54;CIRPOS=-54,54;CQ=143.49;EVENT=gridss40_73;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_73h;RAS=1;RASQ=0.00;REF=252;REFPAIR=32;RP=4;RPQ=71.74;SB=0.0;SC=218M1X107N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:71.74:4:0:0:0.00:0:0.00:0.00:0:0:19.08:1:19.08:0:0.00:1:0.00:0:0.00:143.49:0.00:252:32:4:71.74:0:0.00:4
2	152332811	gridss40_73h	G	]2:152332687]G	143.49	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm40-1000,asm40-413;BEIDH=0,0;BEIDL=133,2;BQ=172.44;BSC=7;BSCQ=172.44;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CIPOS=-54,54;CIRPOS=-54,54;CQ=143.49;EVENT=gridss40_73;IC=0;IMPRECISE;IQ=0.00;PARID=gridss40_73o;RAS=1;RASQ=71.74;REF=332;REFPAIR=34;RP=4;RPQ=71.74;SB=0.5714286;SC=1X107N1X159M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:172.44:7:172.44:0:0.00:7:0.00:0:0.00:143.49:71.74:332:34:4:71.74:0:0.00:4
2	152337487	gridss40_1098b	A	.AAGAAGGA	322.17	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=152.20;BASRP=0;BASSR=9;BEID=asm40-1017;BEIDH=-1;BEIDL=7;BQ=322.17;BSC=10;BSCQ=169.97;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=322.17;EVENT=gridss40_1098;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=287;REFPAIR=24;RP=0;RPQ=0.00;SB=0.7368421;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:152.20:0:9:322.17:10:169.97:0:0.00:10:0.00:0:0.00:0.00:0.00:287:24:0:0.00:0:0.00:0
2	152337491	gridss40_560b	C	CGACATT.	647.29	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=306.59;BASRP=0;BASSR=18;BEID=asm40-435,asm40-457;BEIDH=-1,-1;BEIDL=0,0;BQ=647.29;BSC=19;BSCQ=340.70;BUM=0;BUMQ=0.00;BVF=19;CAS=0;CASQ=0.00;CQ=323.73;EVENT=gridss40_560;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=276;REFPAIR=23;RP=0;RPQ=0.00;SB=0.45945945;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:306.59:0:18:647.29:19:340.70:0:0.00:19:0.00:0:0.00:0.00:0.00:276:23:0:0.00:0:0.00:0
2	152338540	gridss40_1128b	G	.TTGTTGAG	118.16	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=50.77;BASRP=0;BASSR=3;BEID=asm40-1061;BEIDH=-1;BEIDL=7;BQ=118.16;BSC=4;BSCQ=67.39;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=101.54;EVENT=gridss40_1128;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=221;REFPAIR=31;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:50.77:0:3:118.16:4:67.39:0:0.00:4:0.00:0:0.00:0.00:0.00:221:31:0:0.00:0:0.00:0
2	215593025	gridss46_360b	A	AAAAAAAAATTTACCTTGAGAAAAAGAGTAAAAATTTTAAAATAACAAATACATT.	1614.51	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=662.77;BASRP=0;BASSR=27;BEID=asm46-13,asm46-7;BEIDH=-1,-1;BEIDL=0,0;BQ=1614.51;BSC=38;BSCQ=951.74;BUM=0;BUMQ=0.00;BVF=39;CAS=0;CASQ=0.00;CQ=1020.26;EVENT=gridss46_360;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=87;REFPAIR=59;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:662.77:0:27:1614.51:38:951.74:0:0.00:39:0.00:0:0.00:0.00:0.00:87:59:0:0.00:0:0.00:0
2	215593263	gridss46_1817b	T	.AAACAACATAAATTACTAATCTTTCATTAAAAT	690.97	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=57.01;BASRP=0;BASSR=3;BEID=asm46-1672;BEIDH=-1;BEIDL=32;BQ=690.97;BSC=28;BSCQ=633.95;BUM=0;BUMQ=0.00;BVF=28;CAS=0;CASQ=0.00;CQ=400.66;EVENT=gridss46_1817;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=186;REFPAIR=25;RP=0;RPQ=0.00;SB=0.032258064;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:57.01:0:3:690.97:28:633.95:0:0.00:28:0.00:0:0.00:0.00:0.00:186:25:0:0.00:0:0.00:0
2	215595005	gridss46_62o	C	C[2:215595063[	141.44	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=52.91;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-126;BEIDH=2;BEIDL=0;BQ=55.26;BSC=3;BSCQ=55.26;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-17,17;CQ=123.67;EVENT=gridss46_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_62h;RAS=0;RASQ=0.00;REF=277;REFPAIR=33;RP=5;RPQ=88.52;SB=0.6666667;SC=101M7D187M1X30N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.91:3:0:0:0.00:0:0.00:0.00:0:0:55.26:3:55.26:0:0.00:2:0.00:0:0.00:141.44:0.00:277:33:5:88.52:0:0.00:5
2	215595063	gridss46_62h	A	]2:215595005]A	141.44	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-126;BEIDH=0;BEIDL=2;BQ=103.26;BSC=5;BSCQ=103.26;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-15,16;CQ=123.67;EVENT=gridss46_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_62o;RAS=1;RASQ=52.91;REF=320;REFPAIR=40;RP=5;RPQ=88.52;SB=0.6;SC=1X33N1X100M4D225M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:103.26:5:103.26:0:0.00:5:0.00:0:0.00:141.44:52.91:320:40:5:88.52:0:0.00:5
2	215603212	gridss46_85o	T	T[2:215603299[	53.31	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-13,13;CQ=53.31;EVENT=gridss46_85;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_85h;RAS=0;RASQ=0.00;REF=259;REFPAIR=19;RP=3;RPQ=53.31;SC=101M81D110M1X33N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.31:0.00:259:19:3:53.31:0:0.00:3
2	215603299	gridss46_85h	G	]2:215603212]G	53.31	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-17,17;CQ=53.31;EVENT=gridss46_85;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_85o;RAS=0;RASQ=0.00;REF=220;REFPAIR=17;RP=3;RPQ=53.31;SC=1X25N1X100M8D192M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.31:0.00:220:17:3:53.31:0:0.00:3
2	215613604	gridss46_739b	T	TTACTGAACACTCT.	241.56	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=120.78;BASRP=0;BASSR=7;BEID=asm46-407;BEIDH=-1;BEIDL=0;BQ=241.56;BSC=7;BSCQ=120.78;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=241.56;EVENT=gridss46_739;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=57;REFPAIR=9;RP=0;RPQ=0.00;SB=0.14285715;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:120.78:0:7:241.56:7:120.78:0:0.00:7:0.00:0:0.00:0.00:0.00:57:9:0:0.00:0:0.00:0
2	215619808	gridss46_121o	A	A[2:215619931[	53.90	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-13,13;CQ=53.90;EVENT=gridss46_121;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_121h;RAS=0;RASQ=0.00;REF=262;REFPAIR=29;RP=3;RPQ=53.90;SC=101M48D129M1X47N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.90:0.00:262:29:3:53.90:0:0.00:3
2	215619931	gridss46_121h	G	]2:215619808]G	53.90	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-24,24;CQ=53.90;EVENT=gridss46_121;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_121o;RAS=0;RASQ=0.00;REF=282;REFPAIR=27;RP=3;RPQ=53.90;SC=1X25N1X100M95D105M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.90:0.00:282:27:3:53.90:0:0.00:3
2	215622274	gridss46_2244b	A	.ATGATA	118.71	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=59.35;BASRP=0;BASSR=3;BEID=asm46-2194;BEIDH=-1;BEIDL=5;BQ=118.71;BSC=3;BSCQ=59.35;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=118.71;EVENT=gridss46_2244;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=395;REFPAIR=29;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:59.35:0:3:118.71:3:59.35:0:0.00:3:0.00:0:0.00:0.00:0.00:395:29:0:0.00:0:0.00:0
2	215623844	gridss46_135o	A	A[2:215623979[	53.80	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.44;BSC=1;BSCQ=19.44;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-44,45;CIRPOS=-2,2;CQ=53.80;EVENT=gridss46_135;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_135h;RAS=0;RASQ=0.00;REF=288;REFPAIR=25;RP=3;RPQ=53.80;SB=1.0;SC=237M1X88N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.44:1:19.44:0:0.00:1:0.00:0:0.00:53.80:0.00:288:25:3:53.80:0:0.00:3
2	215623979	gridss46_135h	C	]2:215623844]C	53.80	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-44,45;CQ=53.80;EVENT=gridss46_135;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_135o;RAS=0;RASQ=0.00;REF=316;REFPAIR=28;RP=3;RPQ=53.80;SC=1X3N1X100M19D86M1D116M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.80:0.00:316:28:3:53.80:0:0.00:3
2	215627854	gridss46_141o	G	G[2:215627935[	53.58	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-17,18;CQ=53.58;EVENT=gridss46_141;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_141h;RAS=0;RASQ=0.00;REF=406;REFPAIR=19;RP=3;RPQ=53.58;SB=1.0;SC=57M74D154M1X40N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:53.58:0.00:406:19:3:53.58:0:0.00:3
2	215627935	gridss46_141h	C	]2:215627854]C	53.58	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=113.84;BSC=5;BSCQ=113.84;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-17,18;CIRPOS=-20,21;CQ=53.58;EVENT=gridss46_141;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_141o;RAS=0;RASQ=0.00;REF=410;REFPAIR=32;RP=3;RPQ=53.58;SB=0.4;SC=1X34N1X134M56D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:113.84:5:113.84:0:0.00:5:0.00:0:0.00:53.58:0.00:410:32:3:53.58:0:0.00:3
2	215632036	gridss46_2396b	A	.ATAAAGAGA	283.20	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=120.76;BASRP=0;BASSR=7;BEID=asm46-2313;BEIDH=-1;BEIDL=8;BQ=283.20;BSC=9;BSCQ=162.44;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=241.37;EVENT=gridss46_2396;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=132;REFPAIR=5;RP=0;RPQ=0.00;SB=0.88235295;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:120.76:0:7:283.20:9:162.44:0:0.00:9:0.00:0:0.00:0.00:0.00:132:5:0:0.00:0:0.00:0
2	215632656	gridss46_1020b	A	AGCTAC.	116.73	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=49.86;BASRP=0;BASSR=3;BEID=asm46-799;BEIDH=-1;BEIDL=0;BQ=116.73;BSC=4;BSCQ=66.86;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=99.72;EVENT=gridss46_1020;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=248;REFPAIR=31;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:49.86:0:3:116.73:4:66.86:0:0.00:4:0.00:0:0.00:0.00:0.00:248:31:0:0.00:0:0.00:0
2	215633086	gridss46_152o	A	A[2:215633126[	53.28	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=18.67;BSC=1;BSCQ=18.67;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-29,30;CQ=53.28;EVENT=gridss46_152;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_152h;RAS=0;RASQ=0.00;REF=345;REFPAIR=27;RP=3;RPQ=53.28;SB=1.0;SC=104M113D100M1X8N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:18.67:1:18.67:0:0.00:1:0.00:0:0.00:53.28:0.00:345:27:3:53.28:0:0.00:3
2	215633126	gridss46_152h	C	]2:215633086]C	53.28	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.61;BSC=1;BSCQ=19.61;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-29,30;CIRPOS=-4,5;CQ=53.28;EVENT=gridss46_152;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_152o;RAS=0;RASQ=0.00;REF=300;REFPAIR=24;RP=3;RPQ=53.28;SB=1.0;SC=1X58N1X6M1D132M27D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.61:1:19.61:0:0.00:1:0.00:0:0.00:53.28:0.00:300:24:3:53.28:0:0.00:3
2	215634231	gridss46_1053b	C	CGAGGC.	99.72	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=49.86;BASRP=0;BASSR=3;BEID=asm46-792;BEIDH=-1;BEIDL=0;BQ=99.72;BSC=3;BSCQ=49.86;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=99.72;EVENT=gridss46_1053;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=20;REFPAIR=6;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:49.86:0:3:99.72:3:49.86:0:0.00:3:0.00:0:0.00:0.00:0.00:20:6:0:0.00:0:0.00:0
2	215636667	gridss46_1092b	A	AAACAACATTTCCCAATTTTTCATAAGTTTGAATTTTTTTTTTTTACAAAGAGTTATGGTTTTTTTAACAACTG.	321.28	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=151.97;BASRP=0;BASSR=7;BEID=asm46-791;BEIDH=-1;BEIDL=0;BQ=321.28;BSC=8;BSCQ=169.31;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=387.61;EVENT=gridss46_1092;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=91;REFPAIR=29;RP=0;RPQ=0.00;SB=0.8666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:151.97:0:7:321.28:8:169.31:0:0.00:8:0.00:0:0.00:0.00:0.00:91:29:0:0.00:0:0.00:0
2	215652503	gridss46_182o	G	G[2:215652605[	105.98	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=52.99;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-1095;BEIDH=2;BEIDL=0;BQ=37.75;BSC=2;BSCQ=37.75;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-33,33;CIRPOS=-33,33;CQ=105.98;EVENT=gridss46_182;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_182h;RAS=0;RASQ=0.00;REF=259;REFPAIR=29;RP=3;RPQ=52.99;SB=0.5;SC=101M27D132M1X65N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.99:3:0:0:0.00:0:0.00:0.00:0:0:37.75:2:37.75:0:0.00:2:0.00:0:0.00:105.98:0.00:259:29:3:52.99:0:0.00:3
2	215652605	gridss46_182h	A	]2:215652503]A	105.98	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm46-1095;BEIDH=0;BEIDL=2;BQ=116.38;BSC=6;BSCQ=116.38;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CIPOS=-33,33;CIRPOS=-33,33;CQ=105.98;EVENT=gridss46_182;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_182o;RAS=1;RASQ=52.99;REF=391;REFPAIR=33;RP=3;RPQ=52.99;SB=0.5;SC=1X65N1X168M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:116.38:6:116.38:0:0.00:6:0.00:0:0.00:105.98:52.99:391:33:3:52.99:0:0.00:3
2	215657184	gridss46_2714b	A	.AAATTGGTGAAAAAAAATA	148.24	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=36.26;BASRP=0;BASSR=2;BEID=asm46-2703;BEIDH=-1;BEIDL=18;BQ=148.24;BSC=6;BSCQ=111.98;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=96.07;EVENT=gridss46_2714;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=97;REFPAIR=16;RP=0;RPQ=0.00;SB=0.3;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:36.26:0:2:148.24:6:111.98:0:0.00:6:0.00:0:0.00:0.00:0.00:97:16:0:0.00:0:0.00:0
2	215661748	gridss46_200o	A	A[2:215661805[	53.43	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-24,24;CQ=53.43;EVENT=gridss46_200;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_200h;RAS=0;RASQ=0.00;REF=208;REFPAIR=23;RP=3;RPQ=53.43;SC=163M38D100M1X24N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.43:0.00:208:23:3:53.43:0:0.00:3
2	215661805	gridss46_200h	T	]2:215661748]T	53.43	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=42.32;BSC=2;BSCQ=42.32;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-12,13;CQ=53.43;EVENT=gridss46_200;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_200o;RAS=0;RASQ=0.00;REF=350;REFPAIR=37;RP=3;RPQ=53.43;SB=0.0;SC=1X47N1X141M36D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:42.32:2:42.32:0:0.00:2:0.00:0:0.00:53.43:0.00:350:37:3:53.43:0:0.00:3
2	216973924	gridss46_1544b	G	GCCGGAATC.	141.09	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=70.54;BASRP=0;BASSR=4;BEID=asm46-1411;BEIDH=-1;BEIDL=0;BQ=141.09;BSC=4;BSCQ=70.54;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=141.09;EVENT=gridss46_1544;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=46;REFPAIR=18;RP=0;RPQ=0.00;SB=0.25;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:70.54:0:4:141.09:4:70.54:0:0.00:4:0.00:0:0.00:0.00:0.00:46:18:0:0.00:0:0.00:0
2	216981533	gridss46_225o	G	G[2:216981591[	53.04	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=34.16;BSC=2;BSCQ=34.16;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-23,23;CQ=53.04;EVENT=gridss46_225;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_225h;RAS=0;RASQ=0.00;REF=404;REFPAIR=30;RP=3;RPQ=53.04;SB=0.0;SC=101M41D172M1X11N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:34.16:2:34.16:0:0.00:2:0.00:0:0.00:53.04:0.00:404:30:3:53.04:0:0.00:3
2	216981591	gridss46_225h	T	]2:216981533]T	53.04	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=2;BANRPQ=35.14;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-6,6;CQ=53.04;EVENT=gridss46_225;IC=0;IMPRECISE;IQ=0.00;PARID=gridss46_225o;RAS=0;RASQ=0.00;REF=332;REFPAIR=21;RP=3;RPQ=53.04;SC=1X45N1X172M7D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:2:35.14:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.04:0.00:332:21:3:53.04:0:0.00:3
2	216995651	gridss46_230o	A	A[2:216995721[	58.41	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,0;CIRPOS=0,7;CQ=58.41;EVENT=gridss46_230;HOMLEN=7;HOMSEQ=GAACAAA;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss46_230h;RAS=0;RASQ=0.00;REF=328;REFPAIR=46;RP=2;RPQ=35.25;SB=0.0;SC=132M125D40M1X6N1X;SR=1;SRQ=23.16;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:58.41:0.00:328:46:2:35.25:1:23.16:3
2	216995721	gridss46_230h	G	]2:216995651]G	58.41	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,7;CIRPOS=-7,0;CQ=58.41;EVENT=gridss46_230;HOMLEN=7;HOMSEQ=GAACAAA;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss46_230o;RAS=0;RASQ=0.00;REF=288;REFPAIR=24;RP=2;RPQ=35.25;SB=0.0;SC=1X6N1X106M;SR=1;SRQ=23.16;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:58.41:0.00:288:24:2:35.25:1:23.16:3
3	12619190	gridss50_118b	T	TGAGAGGGAGG.	138.72	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=51.00;BASRP=0;BASSR=3;BEID=asm50-81;BEIDH=-1;BEIDL=0;BQ=138.72;BSC=5;BSCQ=87.72;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=122.10;EVENT=gridss50_118;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=78;REFPAIR=11;RP=0;RPQ=0.00;SB=0.375;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:51.00:0:3:138.72:5:87.72:0:0.00:5:0.00:0:0.00:0.00:0.00:78:11:0:0.00:0:0.00:0
3	32870017	gridss52_66b	T	TTTTGTATGGGTTTTTT.	210.48	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=78.81;BASRP=0;BASSR=4;BEID=asm52-10;BEIDH=-1;BEIDL=0;BQ=210.48;BSC=7;BSCQ=131.67;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=176.10;EVENT=gridss52_66;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=47;REFPAIR=16;RP=0;RPQ=0.00;SB=0.8181818;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:78.81:0:4:210.48:7:131.67:0:0.00:7:0.00:0:0.00:0.00:0.00:47:16:0:0.00:0:0.00:0
3	37035478	gridss52_20o	T	T[3:37035555[	53.74	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-8,8;CQ=53.74;EVENT=gridss52_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_20h;RAS=0;RASQ=0.00;REF=353;REFPAIR=28;RP=3;RPQ=53.74;SC=137M78D100M1X10N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.74:0.00:353:28:3:53.74:0:0.00:3
3	37035555	gridss52_20h	T	]3:37035478]T	53.74	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.26;BSC=1;BSCQ=19.26;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-5,6;CQ=53.74;EVENT=gridss52_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_20o;RAS=0;RASQ=0.00;REF=445;REFPAIR=37;RP=3;RPQ=53.74;SB=1.0;SC=1X15N1X157M52D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.26:1:19.26:0:0.00:1:0.00:0:0.00:53.74:0.00:445:37:3:53.74:0:0.00:3
3	37045527	gridss52_32o	T	T[3:37045639[	178.34	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=106.89;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm52-241;BEIDH=2;BEIDL=0;BQ=98.34;BSC=4;BSCQ=98.34;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-32,32;CQ=178.34;EVENT=gridss52_32;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_32h;RAS=0;RASQ=0.00;REF=320;REFPAIR=28;RP=4;RPQ=71.45;SB=0.5;SC=262M1X63N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.89:6:0:0:0.00:0:0.00:0.00:0:0:98.34:4:98.34:0:0.00:4:0.00:0:0.00:178.34:0.00:320:28:4:71.45:0:0.00:6
3	37045639	gridss52_32h	T	]3:37045527]T	178.34	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=2;BANRPQ=35.82;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm52-241;BEIDH=0;BEIDL=2;BQ=86.99;BSC=4;BSCQ=86.99;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-32,32;CQ=178.34;EVENT=gridss52_32;IC=0;IMPRECISE;IQ=0.00;PARID=gridss52_32o;RAS=1;RASQ=106.89;REF=436;REFPAIR=37;RP=4;RPQ=71.45;SB=0.5;SC=1X63N1X313M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:2:35.82:0:0.00:0.00:0:0:86.99:4:86.99:0:0.00:4:0.00:0:0.00:178.34:106.89:436:37:4:71.45:0:0.00:6
3	37057164	gridss53_34o	G	G[3:37057198[	123.47	LOW_QUAL	AS=1;ASQ=52.96;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-150,asm53-862;BEIDH=2,151;BEIDL=0,0;BQ=34.86;BSC=1;BSCQ=34.86;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-20,20;CIRPOS=-3,4;CQ=123.47;EVENT=gridss53_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_34h;RAS=1;RASQ=0.00;REF=348;REFPAIR=29;RP=4;RPQ=70.51;SB=1.0;SC=101M35D150M1X39N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.96:3:0:0:0.00:0:0.00:0.00:0:0:34.86:1:34.86:0:0.00:1:0.00:0:0.00:123.47:0.00:348:29:4:70.51:0:0.00:4
3	37057198	gridss53_34h	T	]3:37057164]T	123.47	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-150,asm53-862;BEIDH=0,0;BEIDL=2,151;BQ=19.08;BSC=1;BSCQ=19.08;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-3,4;CIRPOS=-20,20;CQ=123.47;EVENT=gridss53_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_34o;RAS=1;RASQ=52.96;REF=352;REFPAIR=34;RP=4;RPQ=70.51;SB=0.0;SC=1X6N1X100M68D113M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:19.08:1:19.08:0:0.00:1:0.00:0:0.00:123.47:52.96:352:34:4:70.51:0:0.00:4
3	37058984	gridss53_38o	T	T[3:37059069[	159.34	LOW_QUAL	AS=1;ASQ=70.69;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-151,asm53-861;BEIDH=2,187;BEIDL=0,0;BQ=81.89;BSC=4;BSCQ=81.89;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-70,70;CIRPOS=-9,10;CQ=159.34;EVENT=gridss53_38;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_38h;RAS=1;RASQ=0.00;REF=399;REFPAIR=39;RP=5;RPQ=88.65;SB=0.75;SC=186M1X139N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:70.69:4:0:0:0.00:0:0.00:0.00:0:0:81.89:4:81.89:0:0.00:4:0.00:0:0.00:159.34:0.00:399:39:5:88.65:0:0.00:5
3	37059069	gridss53_38h	C	]3:37058984]C	159.34	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-151,asm53-861;BEIDH=0,0;BEIDL=2,187;BQ=44.36;BSC=2;BSCQ=44.36;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-70,70;CQ=159.34;EVENT=gridss53_38;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_38o;RAS=1;RASQ=70.69;REF=529;REFPAIR=41;RP=5;RPQ=88.65;SB=0.0;SC=1X18N1X152M54D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:44.36:2:44.36:0:0.00:2:0.00:0:0.00:159.34:70.69:529:41:5:88.65:0:0.00:5
3	37074539	gridss53_66o	T	T[3:37074609[	53.55	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-24,25;CIRPOS=-34,34;CQ=53.55;EVENT=gridss53_66;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_66h;RAS=0;RASQ=0.00;REF=229;REFPAIR=24;RP=3;RPQ=53.55;SB=0.0;SC=139M38D100M1X48N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:53.55:0.00:229:24:3:53.55:0:0.00:3
3	37074609	gridss53_66h	T	]3:37074539]T	53.55	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-24,25;CQ=53.55;EVENT=gridss53_66;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_66o;RAS=0;RASQ=0.00;REF=176;REFPAIR=25;RP=3;RPQ=53.55;SC=1X67N1X126M31D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.55:0.00:176:25:3:53.55:0:0.00:3
3	37090581	gridss53_78o	G	G[3:37090705[	123.74	LOW_QUAL	AS=1;ASQ=53.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-1305,asm53-664;BEIDH=157,2;BEIDL=0,0;BQ=79.70;BSC=3;BSCQ=79.70;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-30,31;CIRPOS=-33,34;CQ=123.74;EVENT=gridss53_78;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_78h;RAS=1;RASQ=0.00;REF=349;REFPAIR=37;RP=4;RPQ=70.74;SB=0.6666667;SC=101M8D156M1X60N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.00:3:0:0:0.00:0:0.00:0.00:0:0:79.70:3:79.70:0:0.00:3:0.00:0:0.00:123.74:0.00:349:37:4:70.74:0:0.00:4
3	37090705	gridss53_78h	A	]3:37090581]A	123.74	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm53-1305,asm53-664;BEIDH=0,0;BEIDL=157,2;BQ=25.12;BSC=1;BSCQ=25.12;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-33,34;CIRPOS=-30,31;CQ=123.74;EVENT=gridss53_78;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_78o;RAS=1;RASQ=53.00;REF=359;REFPAIR=27;RP=4;RPQ=70.74;SB=1.0;SC=1X66N1X178M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:25.12:1:25.12:0:0.00:1:0.00:0:0.00:123.74:53.00:359:27:4:70.74:0:0.00:4
3	37092257	gridss53_85o	T	T[3:37092328[	53.29	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-58,58;CQ=53.29;EVENT=gridss53_85;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_85h;RAS=0;RASQ=0.00;REF=283;REFPAIR=22;RP=3;RPQ=53.29;SC=101M89D119M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.29:0.00:283:22:3:53.29:0:0.00:3
3	37092328	gridss53_85h	C	]3:37092257]C	53.29	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=75.08;BSC=3;BSCQ=75.08;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-58,58;CIRPOS=-8,9;CQ=53.29;EVENT=gridss53_85;IC=0;IMPRECISE;IQ=0.00;PARID=gridss53_85o;RAS=0;RASQ=0.00;REF=174;REFPAIR=21;RP=3;RPQ=53.29;SB=0.6666667;SC=1X115N1X100M6D104M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:75.08:3:75.08:0:0.00:3:0.00:0:0.00:53.29:0.00:174:21:3:53.29:0:0.00:3
3	42368975	gridss53_706b	T	TTAAAGG.	497.58	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=220.66;BASRP=0;BASSR=13;BEID=asm53-688;BEIDH=-1;BEIDL=0;BQ=497.58;BSC=16;BSCQ=276.93;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=423.42;EVENT=gridss53_706;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=116;REFPAIR=22;RP=0;RPQ=0.00;SB=0.27586207;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:220.66:0:13:497.58:16:276.93:0:0.00:16:0.00:0:0.00:0.00:0.00:116:22:0:0.00:0:0.00:0
3	52439509	gridss54_242b	A	.GAGAAAAAAAAAAAAGAAAAAAAAAAAAAAGAAAAAAAAAAAAA	270.21	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=111.33;BASRP=0;BASSR=5;BEID=asm54-178;BEIDH=-1;BEIDL=43;BQ=270.21;BSC=6;BSCQ=158.88;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=204.66;EVENT=gridss54_242;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=39;REFPAIR=8;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:111.33:0:5:270.21:6:158.88:0:0.00:7:0.00:0:0.00:0.00:0.00:39:8:0:0.00:0:0.00:0
3	69323072	gridss56_46b	A	.AGGAAA	142.72	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=33.24;BASRP=0;BASSR=2;BEID=asm56-47;BEIDH=-1;BEIDL=5;BQ=142.72;BSC=6;BSCQ=109.48;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=85.37;EVENT=gridss56_46;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=121;REFPAIR=0;RP=0;RPQ=0.00;SB=0.7777778;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:33.24:0:2:142.72:6:109.48:0:0.00:6:0.00:0:0.00:0.00:0.00:121:0:0:0.00:0:0.00:0
3	121150398	gridss61_11o	A	A[3:121150787[	91.19	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=91.19;ASRP=3;ASSR=2;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-6;BEIDH=156;BEIDL=0;BQ=38.11;BSC=2;BSCQ=38.11;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,0;CIRPOS=-6,0;CQ=91.19;EVENT=gridss61_11;HOMLEN=6;HOMSEQ=GAGGCA;IC=0;IHOMPOS=-6,0;IQ=0.00;PARID=gridss61_11h;RAS=0;RASQ=0.00;REF=395;REFPAIR=44;RP=0;RPQ=0.00;SB=0.5;SC=149M1X5N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:91.19:3:2:0:0.00:0:0.00:0.00:0:0:38.11:2:38.11:0:0.00:0:0.00:0:0.00:91.19:0.00:395:44:0:0.00:0:0.00:4
3	121195308	gridss61_22o	C	CACACACACACACACACACACACACAATCATTTTA[3:121195343[	230.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=230.17;ASRP=0;ASSR=6;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-101;BEIDH=0;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=230.17;EVENT=gridss61_22;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss61_22h;RAS=0;RASQ=0.00;REF=68;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=64M1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:230.17:0:6:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:230.17:0.00:68:0:0:0.00:0:0.00:6
3	121195343	gridss61_22h	A	]3:121195308]ACACACACACACACACACACACACAATCATTTTAA	230.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=6;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm61-101;BEIDH=0;BEIDL=0;BQ=39.35;BSC=2;BSCQ=39.35;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CQ=230.17;EVENT=gridss61_22;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss61_22o;RAS=1;RASQ=230.17;REF=141;REFPAIR=3;RP=0;RPQ=0.00;SB=0.9;SC=1X34M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:6:0:0.00:0:0.00:0.00:0:0:39.35:2:39.35:0:0.00:2:0.00:0:0.00:230.17:230.17:141:3:0:0.00:0:0.00:6
3	121207475	gridss61_36o	C	C[3:121207515[	70.83	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-20,21;CQ=70.83;EVENT=gridss61_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_36h;RAS=0;RASQ=0.00;REF=291;REFPAIR=27;RP=4;RPQ=70.83;SC=149M75D100M1X1N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.83:0.00:291:27:4:70.83:0:0.00:4
3	121207515	gridss61_36h	T	]3:121207475]T	70.83	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=53.24;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=39.87;BSC=2;BSCQ=39.87;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-1,1;CQ=70.83;EVENT=gridss61_36;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_36o;RAS=0;RASQ=0.00;REF=306;REFPAIR=28;RP=4;RPQ=70.83;SB=0.5;SC=1X40N1X133M5D147M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:53.24:0:0.00:0.00:0:0:39.87:2:39.87:0:0.00:2:0.00:0:0.00:70.83:0.00:306:28:4:70.83:0:0.00:4
3	121208046	gridss61_41o	T	T[3:121208095[	53.27	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=17.14;BSC=1;BSCQ=17.14;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-8,9;CQ=88.57;EVENT=gridss61_41;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_41h;RAS=0;RASQ=0.00;REF=471;REFPAIR=40;RP=3;RPQ=53.27;SB=0.0;SC=184M1X21N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:17.14:1:17.14:0:0.00:1:0.00:0:0.00:53.27:0.00:471:40:3:53.27:0:0.00:3
3	121208095	gridss61_41h	T	]3:121208046]T	53.27	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=53.27;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=17.54;BSC=1;BSCQ=17.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-11,11;CQ=88.57;EVENT=gridss61_41;IC=0;IMPRECISE;IQ=0.00;PARID=gridss61_41o;RAS=0;RASQ=0.00;REF=522;REFPAIR=39;RP=3;RPQ=53.27;SB=0.0;SC=1X16N1X187D122M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:53.27:0:0.00:0.00:0:0:17.54:1:17.54:0:0.00:1:0.00:0:0.00:53.27:0.00:522:39:3:53.27:0:0.00:3
3	142169823	gridss63_73o	C	C[3:142169879[	70.76	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1805;BEIDH=215;BEIDL=0;BQ=22.43;BSC=1;BSCQ=22.43;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-14,14;CQ=70.76;EVENT=gridss63_73;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_73h;RAS=1;RASQ=0.00;REF=354;REFPAIR=27;RP=4;RPQ=70.76;SB=0.0;SC=215M10D100M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:22.43:1:22.43:0:0.00:1:0.00:0:0.00:70.76:0.00:354:27:4:70.76:0:0.00:4
3	142169879	gridss63_73h	T	]3:142169823]T	70.76	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1805;BEIDH=0;BEIDL=215;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=0,1;CQ=70.76;EVENT=gridss63_73;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_73o;RAS=0;RASQ=0.00;REF=256;REFPAIR=28;RP=4;RPQ=70.76;SC=1X27N1X166M31D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.76:0.00:256:28:4:70.76:0:0.00:4
3	142173302	gridss63_457b	T	TTTAGGGGGGGTTTCCCTGTCCCCC.	265.81	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=56.86;BASRP=0;BASSR=3;BEID=asm63-29;BEIDH=-1;BEIDL=0;BQ=265.81;BSC=11;BSCQ=208.95;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=136.00;EVENT=gridss63_457;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=59;REFPAIR=16;RP=0;RPQ=0.00;SB=0.71428573;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:56.86:0:3:265.81:11:208.95:0:0.00:11:0.00:0:0.00:0.00:0.00:59:16:0:0.00:0:0.00:0
3	142185121	gridss63_99o	A	A[3:142185207[	71.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=31.07;BSC=1;BSCQ=31.07;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,15;CQ=71.32;EVENT=gridss63_99;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_99h;RAS=0;RASQ=0.00;REF=261;REFPAIR=28;RP=4;RPQ=71.32;SB=0.0;SC=296M1X29N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:31.07:1:31.07:0:0.00:1:0.00:0:0.00:71.32:0.00:261:28:4:71.32:0:0.00:4
3	142215139	gridss63_2157b	T	.CATAATTCCCGACATT	186.12	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=93.06;BASRP=0;BASSR=5;BEID=asm63-2113;BEIDH=-1;BEIDL=15;BQ=186.12;BSC=5;BSCQ=93.06;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=186.12;EVENT=gridss63_2157;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=35;REFPAIR=15;RP=0;RPQ=0.00;SB=0.2;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:93.06:0:5:186.12:5:93.06:0:0.00:5:0.00:0:0.00:0.00:0.00:35:15:0:0.00:0:0.00:0
3	142215159	gridss63_742b	T	TCTGATGACATTTCC.	240.24	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=73.89;BASRP=0;BASSR=4;BEID=asm63-425;BEIDH=-1;BEIDL=0;BQ=240.24;BSC=9;BSCQ=166.36;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=147.77;EVENT=gridss63_742;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=37;REFPAIR=12;RP=0;RPQ=0.00;SB=0.30769232;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:73.89:0:4:240.24:9:166.36:0:0.00:9:0.00:0:0.00:0.00:0.00:37:12:0:0.00:0:0.00:0
3	142219027	gridss63_138o	G	G[3:142219105[	124.52	LOW_QUAL	AS=1;ASQ=53.29;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-2301,asm63-573;BEIDH=158,2;BEIDL=0,0;BQ=37.29;BSC=2;BSCQ=37.29;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-7,8;CQ=124.52;EVENT=gridss63_138;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_138h;RAS=1;RASQ=0.00;REF=238;REFPAIR=20;RP=4;RPQ=71.23;SB=0.5;SC=158M24D100M1X43N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.29:3:0:0:0.00:0:0.00:0.00:0:0:37.29:2:37.29:0:0.00:2:0.00:0:0.00:124.52:0.00:238:20:4:71.23:0:0.00:4
3	142219105	gridss63_138h	A	]3:142219027]A	124.52	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-2301,asm63-573;BEIDH=0,0;BEIDL=158,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-22,22;CQ=124.52;EVENT=gridss63_138;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_138o;RAS=1;RASQ=53.29;REF=276;REFPAIR=20;RP=4;RPQ=71.23;SC=1X14N1X155M55D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:124.52:53.29:276:20:4:71.23:0:0.00:4
3	142219810	gridss63_139o	A	A[3:142219893[	106.08	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.04;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-577;BEIDH=2;BEIDL=0;BQ=37.56;BSC=2;BSCQ=37.56;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=106.08;EVENT=gridss63_139;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_139h;RAS=0;RASQ=0.00;REF=539;REFPAIR=45;RP=3;RPQ=53.04;SB=0.5;SC=101M18D190M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.04:3:0:0:0.00:0:0.00:0.00:0:0:37.56:2:37.56:0:0.00:2:0.00:0:0.00:106.08:0.00:539:45:3:53.04:0:0.00:3
3	142219893	gridss63_139h	A	]3:142219810]A	106.08	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-577;BEIDH=0;BEIDL=2;BQ=53.82;BSC=2;BSCQ=53.82;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=106.08;EVENT=gridss63_139;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_139o;RAS=1;RASQ=53.04;REF=500;REFPAIR=54;RP=3;RPQ=53.04;SB=0.5;SC=1X16N1X232M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:53.82:2:53.82:0:0.00:2:0.00:0:0.00:106.08:53.04:500:54:3:53.04:0:0.00:3
3	142231063	gridss63_2378b	A	.TTTTAAACTAAGGTTTAAAATAAAAAACTAAAAAAGGGAAAAACGAATTACTGAATTACTAA	309.50	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=50.72;BASRP=0;BASSR=2;BEID=asm63-2359;BEIDH=-1;BEIDL=61;BQ=309.50;BSC=12;BSCQ=258.78;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=195.59;EVENT=gridss63_2378;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=151;REFPAIR=9;RP=0;RPQ=0.00;SB=0.11764706;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:50.72:0:2:309.50:12:258.78:0:0.00:12:0.00:0:0.00:0.00:0.00:151:9:0:0.00:0:0.00:0
3	142231080	gridss63_982b	A	AAAAAACAAAGTGATACATCACCAATTTATTAGACATTTATTCTTTTAGATTCTCCATGGGGACAATTCACTGTTTTTAGG.	1832.22	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=3;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=424.54;BASRP=0;BASSR=17;BEID=asm63-724,asm63-726,asm63-728;BEIDH=-1,-1,-1;BEIDL=0,0,0;BQ=1832.22;BSC=55;BSCQ=1407.68;BUM=0;BUMQ=0.00;BVF=55;CAS=0;CASQ=0.00;CQ=947.25;EVENT=gridss63_982;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=168;REFPAIR=48;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:424.54:0:17:1832.22:55:1407.68:0:0.00:55:0.00:0:0.00:0.00:0.00:168:48:0:0.00:0:0.00:0
3	142241669	gridss63_166o	A	A[3:142241718[	211.26	LOW_QUAL	AS=2;ASQ=105.63;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-2540,asm63-934,asm63-935;BEIDH=246,2,2;BEIDL=0,0,0;BQ=131.74;BSC=6;BSCQ=131.74;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CIPOS=-38,38;CIRPOS=-5,6;CQ=211.26;EVENT=gridss63_166;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_166h;RAS=1;RASQ=0.00;REF=195;REFPAIR=27;RP=6;RPQ=105.63;SB=0.8333333;SC=248M1X75N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.63:6:0:0:0.00:0:0.00:0.00:0:0:131.74:6:131.74:0:0.00:6:0.00:0:0.00:211.26:0.00:195:27:6:105.63:0:0.00:6
3	142241718	gridss63_166h	T	]3:142241669]T	211.26	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-2540,asm63-934,asm63-935;BEIDH=0,0,0;BEIDL=246,2,2;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-38,38;CQ=211.26;EVENT=gridss63_166;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_166o;RAS=2;RASQ=105.63;REF=232;REFPAIR=26;RP=6;RPQ=105.63;SB=1.0;SC=1X10N1X274M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:211.26:105.63:232:26:6:105.63:0:0.00:6
3	142252760	gridss63_176o	A	A[3:142252813[	53.26	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=31.59;BSC=1;BSCQ=31.59;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-34,34;CQ=53.26;EVENT=gridss63_176;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_176h;RAS=0;RASQ=0.00;REF=439;REFPAIR=46;RP=3;RPQ=53.26;SB=0.0;SC=101M46D100M1X21N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:31.59:1:31.59:0:0.00:1:0.00:0:0.00:53.26:0.00:439:46:3:53.26:0:0.00:3
3	142252813	gridss63_176h	T	]3:142252760]T	53.26	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=95.61;BSC=4;BSCQ=95.61;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-11,11;CQ=53.26;EVENT=gridss63_176;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_176o;RAS=0;RASQ=0.00;REF=347;REFPAIR=30;RP=3;RPQ=53.26;SB=0.5;SC=1X67N1X112M45D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:95.61:4:95.61:0:0.00:4:0.00:0:0.00:53.26:0.00:347:30:3:53.26:0:0.00:3
3	142260119	gridss63_190o	A	A[3:142260268[	142.30	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=71.15;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1135;BEIDH=2;BEIDL=0;BQ=25.12;BSC=1;BSCQ=25.12;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,15;CIRPOS=-15,15;CQ=142.30;EVENT=gridss63_190;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_190h;RAS=0;RASQ=0.00;REF=323;REFPAIR=34;RP=4;RPQ=71.15;SB=0.0;SC=296M1X29N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:71.15:4:0:0:0.00:0:0.00:0.00:0:0:25.12:1:25.12:0:0.00:1:0.00:0:0.00:142.30:0.00:323:34:4:71.15:0:0.00:4
3	142260268	gridss63_190h	T	]3:142260119]T	142.30	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1135;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-15,15;CIRPOS=-15,15;CQ=142.30;EVENT=gridss63_190;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_190o;RAS=1;RASQ=71.15;REF=238;REFPAIR=29;RP=4;RPQ=71.15;SC=1X29N1X194M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:142.30:71.15:238:29:4:71.15:0:0.00:4
3	142263484	gridss63_1354b	A	AGAGTGGGGAAGAGGTTGAATCAAAAGCATTTT.	319.47	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=132.80;BASRP=0;BASSR=6;BEID=asm63-1163;BEIDH=-1;BEIDL=0;BQ=319.47;BSC=8;BSCQ=186.67;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=468.64;EVENT=gridss63_1354;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=112;REFPAIR=29;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:132.80:0:6:319.47:8:186.67:0:0.00:8:0.00:0:0.00:0.00:0.00:112:29:0:0.00:0:0.00:0
3	142277370	gridss63_2868b	A	.CGTCTCAAA	121.36	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=51.35;BASRP=0;BASSR=3;BEID=asm63-2943;BEIDH=-1;BEIDL=8;BQ=121.36;BSC=4;BSCQ=70.01;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=102.69;EVENT=gridss63_2868;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=19;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:51.35:0:3:121.36:4:70.01:0:0.00:4:0.00:0:0.00:0.00:0.00:19:0:0:0.00:0:0.00:0
3	142278212	gridss63_229o	T	T[3:142278275[	123.74	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.13;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1414;BEIDH=2;BEIDL=0;BQ=55.25;BSC=3;BSCQ=55.25;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-55,55;CIRPOS=-3,4;CQ=123.74;EVENT=gridss63_229;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_229h;RAS=0;RASQ=0.00;REF=361;REFPAIR=32;RP=4;RPQ=70.62;SB=0.6666667;SC=216M1X109N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.13:3:0:0:0.00:0:0.00:0.00:0:0:55.25:3:55.25:0:0.00:3:0.00:0:0.00:123.74:0.00:361:32:4:70.62:0:0.00:4
3	142278275	gridss63_229h	A	]3:142278212]A	123.74	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-1414;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,4;CIRPOS=-55,55;CQ=123.74;EVENT=gridss63_229;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_229o;RAS=1;RASQ=53.13;REF=348;REFPAIR=35;RP=4;RPQ=70.62;SC=1X6N1X235M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:123.74:53.13:348:35:4:70.62:0:0.00:4
3	142281449	gridss63_234o	T	T[3:142281499[	70.99	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-3007;BEIDH=175;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-10,11;CQ=53.16;EVENT=gridss63_234;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_234h;RAS=1;RASQ=0.00;REF=270;REFPAIR=26;RP=4;RPQ=70.99;SC=101M58D170M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.99:0.00:270:26:4:70.99:0:0.00:4
3	142281499	gridss63_234h	T	]3:142281449]T	70.99	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm63-3007;BEIDH=0;BEIDL=175;BQ=17.00;BSC=1;BSCQ=17.00;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=0,1;CQ=53.16;EVENT=gridss63_234;IC=0;IMPRECISE;IQ=0.00;PARID=gridss63_234o;RAS=0;RASQ=0.00;REF=274;REFPAIR=28;RP=4;RPQ=70.99;SB=1.0;SC=1X20N1X46M67D101M11D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:17.00:1:17.00:0:0.00:1:0.00:0:0.00:70.99:0.00:274:28:4:70.99:0:0.00:4
3	142292315	gridss63_1650b	A	AAAAAATTTATAAAAACAACAAA.	235.50	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=93.79;BASRP=0;BASSR=5;BEID=asm63-1544;BEIDH=-1;BEIDL=0;BQ=235.50;BSC=6;BSCQ=141.71;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=202.44;EVENT=gridss63_1650;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=47;REFPAIR=7;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:93.79:0:5:235.50:6:141.71:0:0.00:7:0.00:0:0.00:0.00:0.00:47:7:0:0.00:0:0.00:0
3	169325568	gridss66_14b	A	ATGCTTGTAG.	276.45	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=138.22;BASRP=0;BASSR=8;BEID=asm66-10;BEIDH=-1;BEIDL=0;BQ=276.45;BSC=8;BSCQ=138.22;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=276.45;EVENT=gridss66_14;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=100;REFPAIR=12;RP=0;RPQ=0.00;SB=0.625;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:138.22:0:8:276.45:8:138.22:0:0.00:8:0.00:0:0.00:0.00:0.00:100:12:0:0.00:0:0.00:0
3	169325574	gridss66_45b	G	.ATAAATGCTTG	382.16	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=191.08;BASRP=0;BASSR=11;BEID=asm66-40;BEIDH=-1;BEIDL=10;BQ=382.16;BSC=11;BSCQ=191.08;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=382.16;EVENT=gridss66_45;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=106;REFPAIR=12;RP=0;RPQ=0.00;SB=0.45454547;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:191.08:0:11:382.16:11:191.08:0:0.00:10:0.00:0:0.00:0.00:0.00:106:12:0:0.00:0:0.00:0
3	178867286	gridss67_46o	T	T[3:178867342[	52.92	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=52.92;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-1579;BEIDH=149;BEIDL=0;BQ=36.49;BSC=2;BSCQ=36.49;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-4,5;CQ=106.26;EVENT=gridss67_46;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_46h;RAS=1;RASQ=0.00;REF=432;REFPAIR=36;RP=3;RPQ=52.92;SB=1.0;SC=149M163D1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:52.92:0:0.00:0.00:0:0:36.49:2:36.49:0:0.00:2:0.00:0:0.00:52.92:0.00:432:36:3:52.92:0:0.00:3
3	178867342	gridss67_46h	A	]3:178867286]A	52.92	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-1579;BEIDH=0;BEIDL=149;BQ=37.14;BSC=1;BSCQ=37.14;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-8,9;CQ=106.26;EVENT=gridss67_46;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_46o;RAS=0;RASQ=0.00;REF=446;REFPAIR=48;RP=3;RPQ=52.92;SB=1.0;SC=1X8N1X110M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:37.14:1:37.14:0:0.00:1:0.00:0:0.00:52.92:0.00:446:48:3:52.92:0:0.00:3
3	178867402	gridss67_48o	C	C[3:178867506[	213.48	LOW_QUAL	AS=1;ASQ=106.74;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-1578,asm67-96;BEIDH=164,2;BEIDL=0,0;BQ=39.74;BSC=2;BSCQ=39.74;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-7,8;CQ=213.48;EVENT=gridss67_48;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_48h;RAS=1;RASQ=0.00;REF=424;REFPAIR=38;RP=6;RPQ=106.74;SB=0.0;SC=295M1X30N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.74:6:0:0:0.00:0:0.00:0.00:0:0:39.74:2:39.74:0:0.00:2:0.00:0:0.00:213.48:0.00:424:38:6:106.74:0:0.00:6
3	178867506	gridss67_48h	T	]3:178867402]T	213.48	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-1578,asm67-96;BEIDH=0,0;BEIDL=164,2;BQ=22.80;BSC=1;BSCQ=22.80;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-15,16;CQ=213.48;EVENT=gridss67_48;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_48o;RAS=1;RASQ=106.74;REF=380;REFPAIR=48;RP=6;RPQ=106.74;SB=1.0;SC=1X14N1X270M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:22.80:1:22.80:0:0.00:1:0.00:0:0.00:213.48:106.74:380:48:6:106.74:0:0.00:6
3	178867968	gridss67_50o	T	TGTGTGTGTGTGTGTGTGTGTGTTGGTATTTTGCTTAAGTTTTTTCATCT[3:178868018[	118.74	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=118.74;ASRP=0;ASSR=3;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-14;BEIDH=0;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=118.74;EVENT=gridss67_50;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss67_50h;RAS=0;RASQ=0.00;REF=114;REFPAIR=20;RP=0;RPQ=0.00;SB=0.0;SC=65M1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:118.74:0:3:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:118.74:0.00:114:20:0:0.00:0:0.00:3
3	178868018	gridss67_50h	C	]3:178867968]GTGTGTGTGTGTGTGTGTGTGTTGGTATTTTGCTTAAGTTTTTTCATCTC	118.74	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=3;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-14;BEIDH=0;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=118.74;EVENT=gridss67_50;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss67_50o;RAS=1;RASQ=118.74;REF=129;REFPAIR=15;RP=0;RPQ=0.00;SB=0.0;SC=1X28M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:3:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:118.74:118.74:129:15:0:0.00:0:0.00:3
3	178871683	gridss67_59o	A	A[3:178871736[	53.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.80;BSC=1;BSCQ=19.80;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-13,14;CQ=53.32;EVENT=gridss67_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_59h;RAS=0;RASQ=0.00;REF=240;REFPAIR=23;RP=3;RPQ=53.32;SB=1.0;SC=101M7D101M2D39M1D61M1X13N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.80:1:19.80:0:0.00:1:0.00:0:0.00:53.32:0.00:240:23:3:53.32:0:0.00:3
3	178871736	gridss67_59h	A	]3:178871683]A	53.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-7,7;CQ=53.32;EVENT=gridss67_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_59o;RAS=0;RASQ=0.00;REF=246;REFPAIR=32;RP=3;RPQ=53.32;SC=1X26N1X179M19D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.32:0.00:246:32:3:53.32:0:0.00:3
3	178878740	gridss67_81o	A	A[3:178878800[	141.76	LOW_QUAL	AS=1;ASQ=53.03;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-1728,asm67-266;BEIDH=155,2;BEIDL=0,0;BQ=77.30;BSC=4;BSCQ=77.30;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-38,38;CIRPOS=-8,9;CQ=141.76;EVENT=gridss67_81;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_81h;RAS=1;RASQ=0.00;REF=441;REFPAIR=28;RP=5;RPQ=88.73;SB=0.75;SC=250M1X75N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.03:3:0:0:0.00:0:0.00:0.00:0:0:77.30:4:77.30:0:0.00:4:0.00:0:0.00:141.76:0.00:441:28:5:88.73:0:0.00:5
3	178878800	gridss67_81h	T	]3:178878740]T	141.76	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-1728,asm67-266;BEIDH=0,0;BEIDL=155,2;BQ=18.02;BSC=1;BSCQ=18.02;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-38,38;CQ=141.76;EVENT=gridss67_81;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_81o;RAS=1;RASQ=53.03;REF=475;REFPAIR=27;RP=5;RPQ=88.73;SB=1.0;SC=1X16N1X193M15D91M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:18.02:1:18.02:0:0.00:1:0.00:0:0.00:141.76:53.03:475:27:5:88.73:0:0.00:5
3	178884552	gridss67_90o	A	A[3:178884615[	212.93	LOW_QUAL	AS=2;ASQ=106.46;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-1839,asm67-399,asm67-400;BEIDH=324,2,2;BEIDL=0,0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-11,12;CQ=212.93;EVENT=gridss67_90;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_90h;RAS=1;RASQ=0.00;REF=431;REFPAIR=49;RP=6;RPQ=106.46;SC=323M1X2N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.46:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:212.93:0.00:431:49:6:106.46:0:0.00:6
3	178884615	gridss67_90h	C	]3:178884552]C	212.93	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-1839,asm67-399,asm67-400;BEIDH=0,0,0;BEIDL=324,2,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,12;CIRPOS=-1,2;CQ=212.93;EVENT=gridss67_90;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_90o;RAS=2;RASQ=106.46;REF=412;REFPAIR=42;RP=6;RPQ=106.46;SC=1X22N1X144M6D142M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:212.93:106.46:412:42:6:106.46:0:0.00:6
3	178887865	gridss67_1901b	C	.GCGCGCGTGCACAC	347.83	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=173.91;BASRP=0;BASSR=10;BEID=asm67-1765;BEIDH=-1;BEIDL=13;BQ=347.83;BSC=10;BSCQ=173.91;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=347.83;EVENT=gridss67_1901;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=40;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:173.91:0:10:347.83:10:173.91:0:0.00:10:0.00:0:0.00:0.00:0.00:40:0:0:0.00:0:0.00:0
3	178897674	gridss67_105o	C	C[3:178897725[	124.38	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.51;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-591;BEIDH=2;BEIDL=0;BQ=18.31;BSC=1;BSCQ=18.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,4;CQ=142.18;EVENT=gridss67_105;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_105h;RAS=0;RASQ=0.00;REF=341;REFPAIR=29;RP=4;RPQ=70.87;SB=0.0;SC=115M37D101M64D1X8N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.51:3:0:0:0.00:0:0.00:0.00:0:0:18.31:1:18.31:0:0.00:1:0.00:0:0.00:124.38:0.00:341:29:4:70.87:0:0.00:4
3	178897725	gridss67_105h	G	]3:178897674]G	124.38	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=53.51;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-591;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,4;CIRPOS=-4,5;CQ=142.18;EVENT=gridss67_105;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_105o;RAS=1;RASQ=53.51;REF=380;REFPAIR=46;RP=4;RPQ=70.87;SC=1X7N1X205M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:3:53.51:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:124.38:53.51:380:46:4:70.87:0:0.00:4
3	178902159	gridss67_127o	T	T[3:178902209[	70.93	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=40.56;BSC=2;BSCQ=40.56;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-2,3;CQ=70.93;EVENT=gridss67_127;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_127h;RAS=0;RASQ=0.00;REF=439;REFPAIR=39;RP=4;RPQ=70.93;SB=1.0;SC=146M71D102M1X2N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:40.56:2:40.56:0:0.00:2:0.00:0:0.00:70.93:0.00:439:39:4:70.93:0:0.00:4
3	178902209	gridss67_127h	A	]3:178902159]A	70.93	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-1,2;CQ=70.93;EVENT=gridss67_127;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_127o;RAS=0;RASQ=0.00;REF=471;REFPAIR=48;RP=4;RPQ=70.93;SC=1X4N1X129M66D126M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.93:0.00:471:48:4:70.93:0:0.00:4
3	178917172	gridss67_156o	A	A[3:178917207[	52.68	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-26,26;CQ=52.68;EVENT=gridss67_156;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_156h;RAS=0;RASQ=0.00;REF=284;REFPAIR=33;RP=3;RPQ=52.68;SC=96M120D106M1X3N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:52.68:0.00:284:33:3:52.68:0:0.00:3
3	178917207	gridss67_156h	T	]3:178917172]T	52.68	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=36.80;BSC=2;BSCQ=36.80;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-2,2;CQ=52.68;EVENT=gridss67_156;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_156o;RAS=0;RASQ=0.00;REF=208;REFPAIR=23;RP=3;RPQ=52.68;SB=1.0;SC=1X51N1X96M63D142M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:36.80:2:36.80:0:0.00:2:0.00:0:0.00:52.68:0.00:208:23:3:52.68:0:0.00:3
3	178917763	gridss67_2314b	T	.ATGATAAATTATTCTAAATAATTATAAAAGTGAATCTTTTTCCTTTTTTTTAATTTTTTTTATGTT	166.70	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=30.66;BASRP=0;BASSR=1;BEID=asm67-2260;BEIDH=-1;BEIDL=65;BQ=166.70;BSC=6;BSCQ=136.05;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=128.00;EVENT=gridss67_2314;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=115;REFPAIR=12;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:30.66:0:1:166.70:6:136.05:0:0.00:6:0.00:0:0.00:0.00:0.00:115:12:0:0.00:0:0.00:0
3	178925324	gridss67_1214b	T	TTTCTTTTCTATTT.	241.01	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=138.45;BASRP=0;BASSR=7;BEID=asm67-1012;BEIDH=-1;BEIDL=0;BQ=241.01;BSC=6;BSCQ=102.55;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=241.01;EVENT=gridss67_1214;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=74;REFPAIR=17;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:138.45:0:7:241.01:6:102.55:0:0.00:7:0.00:0:0.00:0.00:0.00:74:17:0:0.00:0:0.00:0
3	178945290	gridss67_212o	G	G[3:178945331[	70.29	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=41.69;BSC=2;BSCQ=41.69;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-10,10;CIRPOS=0,1;CQ=106.06;EVENT=gridss67_212;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_212h;RAS=0;RASQ=0.00;REF=493;REFPAIR=42;RP=4;RPQ=70.29;SB=0.5;SC=183M123D1X19N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:41.69:2:41.69:0:0.00:2:0.00:0:0.00:70.29:0.00:493:42:4:70.29:0:0.00:4
3	178945296	gridss67_214o	C	C[3:178945505[	107.25	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.63;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-1398;BEIDH=2;BEIDL=0;BQ=42.25;BSC=2;BSCQ=42.25;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-6,7;CQ=107.25;EVENT=gridss67_214;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_214h;RAS=0;RASQ=0.00;REF=486;REFPAIR=44;RP=3;RPQ=53.63;SB=0.5;SC=101M105D107M1X12N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.63:3:0:0:0.00:0:0.00:0.00:0:0:42.25:2:42.25:0:0.00:1:0.00:0:0.00:107.25:0.00:486:44:3:53.63:0:0.00:3
3	178945331	gridss67_212h	G	]3:178945290]G	70.29	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=52.43;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-10,10;CQ=106.06;EVENT=gridss67_212;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_212o;RAS=0;RASQ=0.00;REF=488;REFPAIR=53;RP=4;RPQ=70.29;SC=2X107M5D89M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:52.43:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.29:0.00:488:53:4:70.29:0:0.00:4
3	178945505	gridss67_214h	G	]3:178945296]G	107.25	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=17.97;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm67-1398;BEIDH=0;BEIDL=2;BQ=99.03;BSC=4;BSCQ=99.03;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-6,7;CQ=107.25;EVENT=gridss67_214;IC=0;IMPRECISE;IQ=0.00;PARID=gridss67_214o;RAS=1;RASQ=53.63;REF=497;REFPAIR=28;RP=3;RPQ=53.63;SB=0.75;SC=1X12N1X167M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:17.97:0:0.00:0.00:0:0:99.03:4:99.03:0:0.00:3:0.00:0:0.00:107.25:53.63:497:28:3:53.63:0:0.00:3
3	191856717	gridss68_96b	T	.CATTATTTGT	431.62	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=206.57;BASRP=0;BASSR=12;BEID=asm68-91;BEIDH=-1;BEIDL=9;BQ=431.62;BSC=13;BSCQ=225.04;BUM=0;BUMQ=0.00;BVF=13;CAS=0;CASQ=0.00;CQ=413.15;EVENT=gridss68_96;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=116;REFPAIR=1;RP=0;RPQ=0.00;SB=0.64;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:206.57:0:12:431.62:13:225.04:0:0.00:13:0.00:0:0.00:0.00:0.00:116:1:0:0.00:0:0.00:0
4	80932520	gridss77_108b	T	TATCTATCT.	54.16	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=36.00;BASRP=0;BASSR=2;BEID=asm77-552;BEIDH=-1;BEIDL=0;BQ=54.16;BSC=1;BSCQ=18.16;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=54.16;EVENT=gridss77_108;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=49;REFPAIR=9;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:36.00:0:2:54.16:1:18.16:0:0.00:3:0.00:0:0.00:0.00:0.00:49:9:0:0.00:0:0.00:0
4	84374136	gridss77_25o	A	AGAGGAATTATGTCCGGTAAGGA[4:84374159[	124.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=124.17;ASRP=0;ASSR=3;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-89;BEIDH=0;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=141.82;EVENT=gridss77_25;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss77_25h;RAS=0;RASQ=0.00;REF=498;REFPAIR=51;RP=0;RPQ=0.00;SB=0.6666667;SC=60M1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:124.17:0:3:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:124.17:0.00:498:51:0:0.00:0:0.00:3
4	84374159	gridss77_25h	A	]4:84374136]GAGGAATTATGTCCGGTAAGGAA	124.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=3;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-89;BEIDH=0;BEIDL=0;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CQ=141.82;EVENT=gridss77_25;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss77_25o;RAS=1;RASQ=124.17;REF=525;REFPAIR=55;RP=0;RPQ=0.00;SB=0.75;SC=1X94M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:3:0:0.00:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:124.17:124.17:525:55:0:0.00:0:0.00:3
4	84374654	gridss77_28o	C	C[4:84374751[	105.80	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=52.90;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-157;BEIDH=2;BEIDL=0;BQ=58.26;BSC=3;BSCQ=58.26;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-41,41;CIRPOS=-41,41;CQ=105.80;EVENT=gridss77_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_28h;RAS=0;RASQ=0.00;REF=350;REFPAIR=30;RP=3;RPQ=52.90;SB=0.0;SC=101M1D142M1X81N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.90:3:0:0:0.00:0:0.00:0.00:0:0:58.26:3:58.26:0:0.00:3:0.00:0:0.00:105.80:0.00:350:30:3:52.90:0:0.00:3
4	84374751	gridss77_28h	A	]4:84374654]A	105.80	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=17.94;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-157;BEIDH=0;BEIDL=2;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-41,41;CIRPOS=-41,41;CQ=105.80;EVENT=gridss77_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_28o;RAS=1;RASQ=52.90;REF=366;REFPAIR=30;RP=3;RPQ=52.90;SB=1.0;SC=1X81N1X152M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:17.94:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:105.80:52.90:366:30:3:52.90:0:0.00:3
4	84386472	gridss77_335b	A	AAAAAAAAAAAAAAAAAAAATAAAAAAAAAGTAAA.	174.20	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=63.00;BASRP=0;BASSR=3;BEID=asm77-185;BEIDH=-1;BEIDL=0;BQ=174.20;BSC=5;BSCQ=111.20;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=153.81;EVENT=gridss77_335;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=43;REFPAIR=6;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:63.00:0:3:174.20:5:111.20:0:0.00:5:0.00:0:0.00:0.00:0.00:43:6:0:0.00:0:0.00:0
4	84388681	gridss77_45o	A	A[4:84388758[	70.75	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=51.71;BSC=3;BSCQ=51.71;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-40,40;CIRPOS=-13,14;CQ=70.75;EVENT=gridss77_45;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_45h;RAS=0;RASQ=0.00;REF=355;REFPAIR=31;RP=4;RPQ=70.75;SB=0.33333334;SC=246M1X79N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:51.71:3:51.71:0:0.00:3:0.00:0:0.00:70.75:0.00:355:31:4:70.75:0:0.00:4
4	84388758	gridss77_45h	A	]4:84388681]A	70.75	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=37.34;BSC=2;BSCQ=37.34;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-40,40;CQ=70.75;EVENT=gridss77_45;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_45o;RAS=0;RASQ=0.00;REF=391;REFPAIR=33;RP=4;RPQ=70.75;SB=1.0;SC=1X26N1X272M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:37.34:2:37.34:0:0.00:2:0.00:0:0.00:70.75:0.00:391:33:4:70.75:0:0.00:4
4	84395298	gridss77_922b	A	.CTAAAAAATA	170.91	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=85.45;BASRP=0;BASSR=5;BEID=asm77-906;BEIDH=-1;BEIDL=9;BQ=170.91;BSC=5;BSCQ=85.45;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=170.91;EVENT=gridss77_922;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=60;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:85.45:0:5:170.91:5:85.45:0:0.00:5:0.00:0:0.00:0.00:0.00:60:0:0:0.00:0:0.00:0
4	84404048	gridss77_71o	G	G[4:84404127[	53.01	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=85.27;BSC=4;BSCQ=85.27;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-62,62;CIRPOS=-15,15;CQ=53.01;EVENT=gridss77_71;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_71h;RAS=0;RASQ=0.00;REF=411;REFPAIR=33;RP=3;RPQ=53.01;SB=0.5;SC=202M1X123N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:85.27:4:85.27:0:0.00:4:0.00:0:0.00:53.01:0.00:411:33:3:53.01:0:0.00:3
4	84404127	gridss77_71h	A	]4:84404048]A	53.01	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=79.55;BSC=4;BSCQ=79.55;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-15,15;CIRPOS=-62,62;CQ=53.01;EVENT=gridss77_71;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_71o;RAS=0;RASQ=0.00;REF=546;REFPAIR=51;RP=3;RPQ=53.01;SB=0.25;SC=1X29N1X172M23D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:79.55:4:79.55:0:0.00:3:0.00:0:0.00:53.01:0.00:546:51:3:53.01:0:0.00:3
4	84405038	gridss77_74o	T	T[4:84405184[	107.18	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.59;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-531;BEIDH=2;BEIDL=0;BQ=48.65;BSC=2;BSCQ=48.65;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-56,57;CIRPOS=-56,57;CQ=107.18;EVENT=gridss77_74;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_74h;RAS=0;RASQ=0.00;REF=291;REFPAIR=28;RP=3;RPQ=53.59;SB=0.5;SC=213M1X112N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.59:3:0:0:0.00:0:0.00:0.00:0:0:48.65:2:48.65:0:0.00:2:0.00:0:0.00:107.18:0.00:291:28:3:53.59:0:0.00:3
4	84405184	gridss77_74h	T	]4:84405038]T	107.18	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm77-531;BEIDH=0;BEIDL=2;BQ=61.19;BSC=2;BSCQ=61.19;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-56,57;CIRPOS=-56,57;CQ=107.18;EVENT=gridss77_74;IC=0;IMPRECISE;IQ=0.00;PARID=gridss77_74o;RAS=1;RASQ=53.59;REF=81;REFPAIR=9;RP=3;RPQ=53.59;SB=1.0;SC=1X112N1X152M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:61.19:2:61.19:0:0.00:2:0.00:0:0.00:107.18:53.59:81:9:3:53.59:0:0.00:3
4	140534144	gridss83_52b	C	.TTATCCAATC	137.95	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=68.98;BASRP=0;BASSR=4;BEID=asm83-40;BEIDH=-1;BEIDL=9;BQ=137.95;BSC=4;BSCQ=68.98;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=137.95;EVENT=gridss83_52;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=279;REFPAIR=33;RP=0;RPQ=0.00;SB=0.25;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:68.98:0:4:137.95:4:68.98:0:0.00:4:0.00:0:0.00:0.00:0.00:279:33:0:0.00:0:0.00:0
4	140534169	gridss83_20b	A	AATCAGG.	154.36	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=68.17;BASRP=0;BASSR=4;BEID=asm83-8;BEIDH=-1;BEIDL=0;BQ=154.36;BSC=5;BSCQ=86.19;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=136.34;EVENT=gridss83_20;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=227;REFPAIR=32;RP=0;RPQ=0.00;SB=0.44444445;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:68.17:0:4:154.36:5:86.19:0:0.00:5:0.00:0:0.00:0.00:0.00:227:32:0:0.00:0:0.00:0
4	148379484	gridss83_72b	C	.GTAAAGTC	194.88	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=87.47;BASRP=0;BASSR=5;BEID=asm83-66;BEIDH=-1;BEIDL=7;BQ=194.88;BSC=6;BSCQ=107.42;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=174.93;EVENT=gridss83_72;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=38;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:87.47:0:5:194.88:6:107.42:0:0.00:6:0.00:0:0.00:0.00:0.00:38:0:0:0.00:0:0.00:0
4	150728603	gridss84_3o	A	[17:52992861[A	96.64	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,5;CIRPOS=0,5;CQ=96.64;EVENT=gridss84_3;HOMLEN=5;HOMSEQ=AAATG;IC=0;IHOMPOS=0,3;IQ=0.00;PARID=gridss84_3h;RAS=0;RASQ=0.00;REF=132;REFPAIR=14;RP=0;RPQ=0.00;SB=0.5;SC=1X4N1X51M;SR=4;SRQ=96.64;SVTYPE=BND;VF=2	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:96.64:0.00:132:14:0:0.00:4:96.64:2
4	171966096	gridss86_12b	G	GAGAGGCA.	135.54	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=67.77;BASRP=0;BASSR=4;BEID=asm86-7;BEIDH=-1;BEIDL=0;BQ=135.54;BSC=4;BSCQ=67.77;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=135.54;EVENT=gridss86_12;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=190;REFPAIR=14;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:67.77:0:4:135.54:4:67.77:0:0.00:4:0.00:0:0.00:0.00:0.00:190:14:0:0.00:0:0.00:0
4	175889946	gridss86_24b	A	AGCTTAATGTACTTT.	126.63	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=52.96;BASRP=0;BASSR=3;BEID=asm86-24;BEIDH=-1;BEIDL=0;BQ=126.63;BSC=4;BSCQ=73.68;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=105.91;EVENT=gridss86_24;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=32;REFPAIR=8;RP=0;RPQ=0.00;SB=0.71428573;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:52.96:0:3:126.63:4:73.68:0:0.00:4:0.00:0:0.00:0.00:0.00:32:8:0:0.00:0:0.00:0
5	74893855	gridss95_25o	T	T[5:74893935[	141.56	LOW_QUAL	AS=1;ASQ=70.78;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm95-231,asm95-501;BEIDH=2,177;BEIDL=0,0;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=141.56;EVENT=gridss95_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss95_25h;RAS=1;RASQ=0.00;REF=164;REFPAIR=25;RP=4;RPQ=70.78;SB=0.0;SC=101M43D176M1X5N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:70.78:4:0:0:0.00:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:141.56:0.00:164:25:4:70.78:0:0.00:4
5	74893935	gridss95_25h	T	]5:74893855]T	141.56	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm95-231,asm95-501;BEIDH=0,0;BEIDL=2,177;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-3,3;CQ=141.56;EVENT=gridss95_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss95_25o;RAS=1;RASQ=70.78;REF=216;REFPAIR=24;RP=4;RPQ=70.78;SC=1X5N1X278M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:141.56:70.78:216:24:4:70.78:0:0.00:4
5	74895554	gridss95_29o	A	A[5:74895603[	53.17	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=22.80;BSC=1;BSCQ=22.80;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-22,23;CQ=53.17;EVENT=gridss95_29;IC=0;IMPRECISE;IQ=0.00;PARID=gridss95_29h;RAS=0;RASQ=0.00;REF=155;REFPAIR=13;RP=3;RPQ=53.17;SB=1.0;SC=101M51D164M1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:22.80:1:22.80:0:0.00:1:0.00:0:0.00:53.17:0.00:155:13:3:53.17:0:0.00:3
5	74895603	gridss95_29h	T	]5:74895554]T	53.17	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,23;CIRPOS=-5,5;CQ=53.17;EVENT=gridss95_29;IC=0;IMPRECISE;IQ=0.00;PARID=gridss95_29o;RAS=0;RASQ=0.00;REF=147;REFPAIR=12;RP=3;RPQ=53.17;SC=1X44N1X100M6D175M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.17:0.00:147:12:3:53.17:0:0.00:3
5	82554891	gridss96_13o	A	A[5:82554961[	71.17	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=60.15;BSC=3;BSCQ=60.15;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-16,16;CQ=71.17;EVENT=gridss96_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss96_13h;RAS=0;RASQ=0.00;REF=333;REFPAIR=31;RP=4;RPQ=71.17;SB=1.0;SC=101M16D116M1X51N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:60.15:3:60.15:0:0.00:3:0.00:0:0.00:71.17:0.00:333:31:4:71.17:0:0.00:4
5	82554961	gridss96_13h	A	]5:82554891]A	71.17	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=68.01;BSC=3;BSCQ=68.01;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-26,26;CQ=71.17;EVENT=gridss96_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss96_13o;RAS=0;RASQ=0.00;REF=338;REFPAIR=39;RP=4;RPQ=71.17;SB=0.6666667;SC=1X31N1X100M6D188M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:68.01:3:68.01:0:0.00:3:0.00:0:0.00:71.17:0.00:338:39:4:71.17:0:0.00:4
5	82649147	gridss96_17o	G	G[5:82649201[	53.08	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=44.14;BSC=2;BSCQ=44.14;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-44,44;CQ=53.08;EVENT=gridss96_17;IC=0;IMPRECISE;IQ=0.00;PARID=gridss96_17h;RAS=0;RASQ=0.00;REF=301;REFPAIR=31;RP=3;RPQ=53.08;SB=0.5;SC=190M32D100M1X3N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:44.14:2:44.14:0:0.00:2:0.00:0:0.00:53.08:0.00:301:31:3:53.08:0:0.00:3
5	82649201	gridss96_17h	T	]5:82649147]T	53.08	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=39.84;BSC=2;BSCQ=39.84;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-44,44;CIRPOS=-2,2;CQ=53.08;EVENT=gridss96_17;IC=0;IMPRECISE;IQ=0.00;PARID=gridss96_17o;RAS=0;RASQ=0.00;REF=307;REFPAIR=32;RP=3;RPQ=53.08;SB=0.5;SC=1X87N1X123M17D98M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:39.84:2:39.84:0:0.00:2:0.00:0:0.00:53.08:0.00:307:32:3:53.08:0:0.00:3
5	112210474	gridss99_153b	T	.AGCTGACCCAACCCCATCCCTGAACAATTCTGATCTCCTCCAATT	494.69	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=73.70;BASRP=0;BASSR=3;BEID=asm99-149;BEIDH=-1;BEIDL=44;BQ=494.69;BSC=16;BSCQ=420.99;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=205.86;EVENT=gridss99_153;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=106;REFPAIR=23;RP=0;RPQ=0.00;SB=0.04761905;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:73.70:0:3:494.69:16:420.99:0:0.00:16:0.00:0:0.00:0.00:0.00:106:23:0:0.00:0:0.00:0
5	119884476	gridss100_4o	A	]5:119884507]A	119.95	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=4;BANSRQ=88.88;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-1,0;CQ=119.95;EVENT=gridss100_4;HOMLEN=1;HOMSEQ=A;IC=0;IHOMPOS=-1,0;IQ=0.00;PARID=gridss100_4h;RAS=0;RASQ=0.00;REF=349;REFPAIR=26;RP=0;RPQ=0.00;SB=0.0;SC=2X60M;SR=5;SRQ=119.95;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:4:88.88:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:119.95:0.00:349:26:0:0.00:5:119.95:5
5	119884507	gridss100_4h	A	A[5:119884476[	88.88	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=4;BANSRQ=88.88;BAQ=0.00;BASRP=0;BASSR=0;BQ=38.71;BSC=2;BSCQ=38.71;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-1,0;CIRPOS=0,1;CQ=119.95;EVENT=gridss100_4;HOMLEN=1;HOMSEQ=A;IC=0;IHOMPOS=-1,0;IQ=0.00;PARID=gridss100_4o;RAS=0;RASQ=0.00;REF=269;REFPAIR=22;RP=0;RPQ=0.00;SB=0.33333334;SC=69M2X;SR=4;SRQ=88.88;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:4:88.88:0.00:0:0:38.71:2:38.71:0:0.00:2:0.00:0:0.00:88.88:0.00:269:22:0:0.00:4:88.88:4
5	123152790	gridss100_49b	A	.GGTAAACA	135.82	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=67.91;BASRP=0;BASSR=4;BEID=asm100-43;BEIDH=-1;BEIDL=7;BQ=135.82;BSC=4;BSCQ=67.91;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=135.82;EVENT=gridss100_49;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=39;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:67.91:0:4:135.82:4:67.91:0:0.00:4:0.00:0:0.00:0.00:0.00:39:0:0:0.00:0:0.00:0
5	176338138	gridss105_11o	A	A[5:176338177[	102.02	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,2;CIRPOS=0,2;CQ=102.02;EVENT=gridss105_11;HOMLEN=2;HOMSEQ=AA;IC=2;IHOMPOS=-25,2;IQ=102.02;PARID=gridss105_11h;RAS=0;RASQ=0.00;REF=16;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=51M1X1N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=2	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:2:102.02:102.02:0.00:16:0:0:0.00:0:0.00:2
5	176338149	gridss105_327b	A	.AAAAAAAAAAGAGAGAGAGAGA	360.63	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=210.00;BASRP=1;BASSR=9;BEID=asm105-340;BEIDH=-1;BEIDL=21;BQ=360.63;BSC=8;BSCQ=150.63;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=360.63;EVENT=gridss105_327;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=22;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:210.00:1:9:360.63:8:150.63:0:0.00:10:0.00:0:0.00:0.00:0.00:22:0:0:0.00:0:0.00:0
5	176338177	gridss105_11h	A	]5:176338138]A	123.57	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=35.29;BSC=2;BSCQ=35.29;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=0,2;CIRPOS=0,2;CQ=102.02;EVENT=gridss105_11;HOMLEN=2;HOMSEQ=AA;IC=2;IHOMPOS=-25,2;IQ=102.02;PARID=gridss105_11o;RAS=0;RASQ=0.00;REF=69;REFPAIR=0;RP=0;RPQ=0.00;SB=0.8;SC=1X1N1X46M;SR=1;SRQ=21.56;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:35.29:2:35.29:0:0.00:2:0.00:2:102.02:123.57:0.00:69:0:0:0.00:1:21.56:3
5	176397296	gridss105_189b	A	AATTTTTTTTTTTTTTTTTAAATTAAAAATTAACTTTTTTTTCTTTTTTTTTTTAAA.	1131.51	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=327.36;BASRP=0;BASSR=14;BEID=asm105-146,asm105-153;BEIDH=-1,-1;BEIDL=0,0;BQ=1131.51;BSC=31;BSCQ=804.15;BUM=0;BUMQ=0.00;BVF=31;CAS=0;CASQ=0.00;CQ=429.34;EVENT=gridss105_189;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=89;REFPAIR=38;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:327.36:0:14:1131.51:31:804.15:0:0.00:31:0.00:0:0.00:0.00:0.00:89:38:0:0.00:0:0.00:0
6	19840831	gridss108_8o	G	G[6:19840947[	107.10	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.55;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm108-89;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-25,25;CIRPOS=-25,25;CQ=107.10;EVENT=gridss108_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss108_8h;RAS=0;RASQ=0.00;REF=351;REFPAIR=37;RP=3;RPQ=53.55;SC=101M48D127M1X49N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.55:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:107.10:0.00:351:37:3:53.55:0:0.00:3
6	19840947	gridss108_8h	T	]6:19840831]T	107.10	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm108-89;BEIDH=0;BEIDL=2;BQ=18.31;BSC=1;BSCQ=18.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-25,25;CIRPOS=-25,25;CQ=107.10;EVENT=gridss108_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss108_8o;RAS=1;RASQ=53.55;REF=354;REFPAIR=36;RP=3;RPQ=53.55;SB=1.0;SC=1X49N1X231M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:18.31:1:18.31:0:0.00:1:0.00:0:0.00:107.10:53.55:354:36:3:53.55:0:0.00:3
6	44615915	gridss110_63b	T	TCCTGCCTG.	531.26	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=239.10;BASRP=0;BASSR=13;BEID=asm110-55;BEIDH=-1;BEIDL=0;BQ=531.26;BSC=15;BSCQ=292.15;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=459.89;EVENT=gridss110_63;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=182;REFPAIR=28;RP=0;RPQ=0.00;SB=0.14285715;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:239.10:0:13:531.26:15:292.15:0:0.00:15:0.00:0:0.00:0.00:0.00:182:28:0:0.00:0:0.00:0
6	44615919	gridss110_113b	C	.TCCTCCTGC	135.93	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=67.97;BASRP=0;BASSR=4;BEID=asm110-106;BEIDH=-1;BEIDL=8;BQ=135.93;BSC=4;BSCQ=67.97;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=135.93;EVENT=gridss110_113;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=171;REFPAIR=28;RP=0;RPQ=0.00;SB=0.25;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:67.97:0:4:135.93:4:67.97:0:0.00:4:0.00:0:0.00:0.00:0.00:171:28:0:0.00:0:0.00:0
6	107141206	gridss117_30b	C	.CAACCTTACAAAGC	140.01	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=70.00;BASRP=0;BASSR=4;BEID=asm117-30;BEIDH=-1;BEIDL=13;BQ=140.01;BSC=4;BSCQ=70.00;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=122.86;EVENT=gridss117_30;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=29;REFPAIR=3;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:70.00:0:4:140.01:4:70.00:0:0.00:4:0.00:0:0.00:0.00:0.00:29:3:0:0.00:0:0.00:0
6	145422101	gridss120_88b	T	TGATACTGTGAGCCCAGCAAATGCGTT.	110.66	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=55.33;BASRP=0;BASSR=3;BEID=asm120-87;BEIDH=-1;BEIDL=0;BQ=110.66;BSC=3;BSCQ=55.33;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=110.66;EVENT=gridss120_88;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=8;REFPAIR=3;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:55.33:0:3:110.66:3:55.33:0:0.00:3:0.00:0:0.00:0.00:0.00:8:3:0:0.00:0:0.00:0
7	6035276	gridss124_14o	T	T[7:6035406[	107.36	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.68;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm124-169;BEIDH=2;BEIDL=0;BQ=61.14;BSC=3;BSCQ=61.14;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-43,44;CIRPOS=-43,44;CQ=107.36;EVENT=gridss124_14;IC=0;IMPRECISE;IQ=0.00;PARID=gridss124_14h;RAS=0;RASQ=0.00;REF=381;REFPAIR=29;RP=3;RPQ=53.68;SB=0.33333334;SC=239M1X86N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.68:3:0:0:0.00:0:0.00:0.00:0:0:61.14:3:61.14:0:0.00:3:0.00:0:0.00:107.36:0.00:381:29:3:53.68:0:0.00:3
7	6035406	gridss124_14h	A	]7:6035276]A	107.36	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm124-169;BEIDH=0;BEIDL=2;BQ=17.76;BSC=1;BSCQ=17.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-43,44;CIRPOS=-43,44;CQ=107.36;EVENT=gridss124_14;IC=0;IMPRECISE;IQ=0.00;PARID=gridss124_14o;RAS=1;RASQ=53.68;REF=498;REFPAIR=25;RP=3;RPQ=53.68;SB=1.0;SC=1X86N1X176M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:17.76:1:17.76:0:0.00:1:0.00:0:0.00:107.36:53.68:498:25:3:53.68:0:0.00:3
7	85047868	gridss29_166h	T	]2:47679372]T	117.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=6;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm29-873;BEIDH=0;BEIDL=96;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-3,0;CIRPOS=-3,0;CQ=117.17;EVENT=gridss29_166;HOMLEN=3;HOMSEQ=TTT;IC=0;IHOMPOS=-3,0;IQ=0.00;PARID=gridss29_166o;RAS=1;RASQ=117.17;REF=0;REFPAIR=0;RP=0;RPQ=0.00;SB=0.6666667;SC=1X2N1X30M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:6:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:117.17:117.17:0:0:0:0.00:0:0.00:6
7	105195796	gridss134_41o	A	A[7:105195959[	106	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-436;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-26,27;CIRPOS=-26,27;CQ=106.00;EVENT=gridss134_41;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_41h;RAS=0;RASQ=0.00;REF=253;REFPAIR=23;RP=3;RPQ=53.00;SC=101M52D120M1X52N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:106.00:0.00:253:23:3:53.00:0:0.00:3
7	105195959	gridss134_41h	A	]7:105195796]A	106	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm134-436;BEIDH=0;BEIDL=2;BQ=18.67;BSC=1;BSCQ=18.67;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-26,27;CIRPOS=-26,27;CQ=106.00;EVENT=gridss134_41;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_41o;RAS=1;RASQ=53.00;REF=222;REFPAIR=29;RP=3;RPQ=53.00;SB=1.0;SC=1X52N1X131M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:18.67:1:18.67:0:0.00:1:0.00:0:0.00:106.00:53.00:222:29:3:53.00:0:0.00:3
7	105198756	gridss134_453b	A	AAAAAAATCTCTATTTTGGTTGTTTTTTTTTGATTTTTTTTTTTTTCATGTTCTGCCTC.	999.43	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=439.86;BASRP=0;BASSR=16;BEID=asm134-357;BEIDH=-1;BEIDL=0;BQ=999.43;BSC=20;BSCQ=559.56;BUM=0;BUMQ=0.00;BVF=20;CAS=0;CASQ=0.00;CQ=879.73;EVENT=gridss134_453;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=114;REFPAIR=14;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:439.86:0:16:999.43:20:559.56:0:0.00:20:0.00:0:0.00:0.00:0.00:114:14:0:0.00:0:0.00:0
7	105207578	gridss134_56o	C	C[7:105207711[	52.91	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=59.44;BSC=3;BSCQ=59.44;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-23,24;CIRPOS=-72,72;CQ=52.91;EVENT=gridss134_56;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_56h;RAS=0;RASQ=0.00;REF=342;REFPAIR=27;RP=3;RPQ=52.91;SB=0.6666667;SC=101M68D110M1X46N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:59.44:3:59.44:0:0.00:3:0.00:0:0.00:52.91:0.00:342:27:3:52.91:0:0.00:3
7	105207711	gridss134_56h	G	]7:105207578]G	52.91	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=18.16;BSC=1;BSCQ=18.16;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-72,72;CIRPOS=-23,24;CQ=52.91;EVENT=gridss134_56;IC=0;IMPRECISE;IQ=0.00;PARID=gridss134_56o;RAS=0;RASQ=0.00;REF=252;REFPAIR=27;RP=3;RPQ=52.91;SB=1.0;SC=1X143N1X127M1D55M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:18.16:1:18.16:0:0.00:1:0.00:0:0.00:52.91:0.00:252:27:3:52.91:0:0.00:3
7	148514605	gridss138_32o	A	A[7:148514648[	70.41	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=66.26;BSC=3;BSCQ=66.26;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-24,25;CIRPOS=-5,6;CQ=70.41;EVENT=gridss138_32;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_32h;RAS=0;RASQ=0.00;REF=383;REFPAIR=27;RP=4;RPQ=70.41;SB=0.0;SC=139M7D131M1X48N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:66.26:3:66.26:0:0.00:3:0.00:0:0.00:70.41:0.00:383:27:4:70.41:0:0.00:4
7	148514648	gridss138_32h	C	]7:148514605]C	70.41	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-24,25;CQ=70.41;EVENT=gridss138_32;IC=0;IMPRECISE;IQ=0.00;PARID=gridss138_32o;RAS=0;RASQ=0.00;REF=369;REFPAIR=36;RP=4;RPQ=70.41;SC=1X10N1X118M21D176M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.41:0.00:369:36:4:70.41:0:0.00:4
7	152366302	gridss138_1144b	A	.TCGACAACCAAAGTAGAAA	145.84	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=55.26;BASRP=0;BASSR=3;BEID=asm138-1157;BEIDH=-1;BEIDL=18;BQ=145.84;BSC=5;BSCQ=90.58;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=128.84;EVENT=gridss138_1144;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=122;REFPAIR=1;RP=0;RPQ=0.00;SB=0.7777778;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:55.26:0:3:145.84:5:90.58:0:0.00:4:0.00:0:0.00:0.00:0.00:122:1:0:0.00:0:0.00:0
8	25272426	gridss141_50b	T	.ACAACCCAAAAAAATAAATTTTAAAAATTTTCCTGGGCTTTTTTTTTTTTTTTTT	1382.51	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=661.77;BASRP=0;BASSR=29;BEID=asm141-44;BEIDH=-1;BEIDL=54;BQ=1382.51;BSC=32;BSCQ=720.74;BUM=0;BUMQ=0.00;BVF=32;CAS=0;CASQ=0.00;CQ=1343.49;EVENT=gridss141_50;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=84;REFPAIR=31;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:661.77:0:29:1382.51:32:720.74:0:0.00:32:0.00:0:0.00:0.00:0.00:84:31:0:0.00:0:0.00:0
8	25272438	gridss141_24b	T	TTTTTTTTTTTTTTTTTTTAAGCTCCTTGGGGTTTATAT.	744.23	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=375.33;BASRP=0;BASSR=18;BEID=asm141-15;BEIDH=-1;BEIDL=0;BQ=744.23;BSC=18;BSCQ=368.90;BUM=0;BUMQ=0.00;BVF=19;CAS=0;CASQ=0.00;CQ=744.23;EVENT=gridss141_24;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=44;REFPAIR=14;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:375.33:0:18:744.23:18:368.90:0:0.00:19:0.00:0:0.00:0.00:0.00:44:14:0:0.00:0:0.00:0
8	90948758	gridss148_222b	T	TAGGCCTG.	203.73	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=84.67;BASRP=0;BASSR=5;BEID=asm148-16;BEIDH=-1;BEIDL=0;BQ=203.73;BSC=7;BSCQ=119.06;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=203.73;EVENT=gridss148_222;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=207;REFPAIR=28;RP=0;RPQ=0.00;SB=0.25;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:84.67:0:5:203.73:7:119.06:0:0.00:7:0.00:0:0.00:0.00:0.00:207:28:0:0.00:0:0.00:0
8	90948760	gridss148_1066b	G	.ATAATAGG	188.16	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=85.20;BASRP=0;BASSR=5;BEID=asm148-959;BEIDH=-1;BEIDL=7;BQ=188.16;BSC=6;BSCQ=102.96;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=188.16;EVENT=gridss148_1066;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=204;REFPAIR=28;RP=0;RPQ=0.00;SB=0.90909094;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:85.20:0:5:188.16:6:102.96:0:0.00:6:0.00:0:0.00:0.00:0.00:204:28:0:0.00:0:0.00:0
8	90951677	gridss148_290b	A	AAAAAAAAAAAAGTCACCACCTTTTGGTTTTATAATCATTTTCCAAATTTCTCCCATTA.	244.87	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=122.43;BASRP=0;BASSR=6;BEID=asm148-22;BEIDH=-1;BEIDL=0;BQ=244.87;BSC=6;BSCQ=122.43;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=244.87;EVENT=gridss148_290;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=253;REFPAIR=33;RP=0;RPQ=0.00;SB=0.8333333;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:122.43:0:6:244.87:6:122.43:0:0.00:6:0.00:0:0.00:0.00:0.00:253:33:0:0.00:0:0.00:0
8	90958288	gridss148_42o	T	T[8:90958353[	124.85	LOW_QUAL	AS=1;ASQ=53.57;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-1203,asm148-287;BEIDH=163,2;BEIDL=0,0;BQ=18.67;BSC=1;BSCQ=18.67;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-34,34;CQ=124.85;EVENT=gridss148_42;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_42h;RAS=1;RASQ=0.00;REF=337;REFPAIR=46;RP=4;RPQ=71.28;SB=0.0;SC=163M58D100M1X4N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.57:3:0:0:0.00:0:0.00:0.00:0:0:18.67:1:18.67:0:0.00:1:0.00:0:0.00:124.85:0.00:337:46:4:71.28:0:0.00:4
8	90958353	gridss148_42h	A	]8:90958288]A	124.85	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-1203,asm148-287;BEIDH=0,0;BEIDL=163,2;BQ=69.93;BSC=4;BSCQ=69.93;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-2,3;CQ=124.85;EVENT=gridss148_42;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_42o;RAS=1;RASQ=53.57;REF=327;REFPAIR=37;RP=4;RPQ=71.28;SB=0.5;SC=1X67N1X126M31D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:69.93:4:69.93:0:0.00:4:0.00:0:0.00:124.85:53.57:327:37:4:71.28:0:0.00:4
8	90961628	gridss148_49o	A	A[8:90961797[	106.76	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.16;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-281;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-23,23;CQ=106.76;EVENT=gridss148_49;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_49h;RAS=0;RASQ=0.00;REF=279;REFPAIR=28;RP=3;RPQ=53.60;SC=101M112D100M1X12N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.16:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:106.76:0.00:279:28:3:53.60:0:0.00:4
8	90961797	gridss148_49h	A	]8:90961628]A	106.76	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=17.83;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-281;BEIDH=0;BEIDL=2;BQ=68.54;BSC=3;BSCQ=68.54;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-6,7;CQ=106.76;EVENT=gridss148_49;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_49o;RAS=1;RASQ=53.16;REF=499;REFPAIR=55;RP=3;RPQ=53.60;SB=0.33333334;SC=1X45N1X190M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:1:17.83:0:0.00:0.00:0:0:68.54:3:68.54:0:0.00:3:0.00:0:0.00:106.76:53.16:499:55:3:53.60:0:0.00:4
8	90962980	gridss148_461b	C	CGGTCTATG.	204.03	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=102.01;BASRP=0;BASSR=6;BEID=asm148-221;BEIDH=-1;BEIDL=0;BQ=204.03;BSC=6;BSCQ=102.01;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=204.03;EVENT=gridss148_461;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=325;REFPAIR=44;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:102.01:0:6:204.03:6:102.01:0:0.00:6:0.00:0:0.00:0.00:0.00:325:44:0:0.00:0:0.00:0
8	90962981	gridss148_1294b	T	.AATGAAAGT	155.27	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=67.20;BASRP=0;BASSR=4;BEID=asm148-1233;BEIDH=-1;BEIDL=8;BQ=155.27;BSC=5;BSCQ=88.07;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=134.40;EVENT=gridss148_1294;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=325;REFPAIR=44;RP=0;RPQ=0.00;SB=0.5555556;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:67.20:0:4:155.27:5:88.07:0:0.00:5:0.00:0:0.00:0.00:0.00:325:44:0:0.00:0:0.00:0
8	90992994	gridss148_115o	G	G[8:90993088[	177.77	LOW_QUAL	AS=1;ASQ=88.88;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-1789,asm148-920;BEIDH=240,2;BEIDL=0,0;BQ=96.91;BSC=4;BSCQ=96.91;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-28,29;CIRPOS=-28,29;CQ=177.77;EVENT=gridss148_115;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_115h;RAS=1;RASQ=0.00;REF=337;REFPAIR=26;RP=5;RPQ=88.88;SB=0.25;SC=269M1X56N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:88.88:5:0:0:0.00:0:0.00:0.00:0:0:96.91:4:96.91:0:0.00:4:0.00:0:0.00:177.77:0.00:337:26:5:88.88:0:0.00:5
8	90993088	gridss148_115h	A	]8:90992994]A	177.77	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm148-1789,asm148-920;BEIDH=0,0;BEIDL=240,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-28,29;CIRPOS=-28,29;CQ=177.77;EVENT=gridss148_115;IC=0;IMPRECISE;IQ=0.00;PARID=gridss148_115o;RAS=1;RASQ=88.88;REF=311;REFPAIR=40;RP=5;RPQ=88.88;SC=1X56N1X216M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:177.77:88.88:311:40:5:88.88:0:0.00:5
8	95847172	gridss149_1o	G	G]15:96892433]	52.78	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,0;CIRPOS=-6,0;CQ=52.78;EVENT=gridss149_1;HOMLEN=6;HOMSEQ=AAGGGG;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss149_1h;RAS=0;RASQ=0.00;REF=429;REFPAIR=34;RP=0;RPQ=0.00;SB=1.0;SC=41M1X5N1X;SR=2;SRQ=52.78;SVTYPE=BND;VF=2	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:52.78:0.00:429:34:0:0.00:2:52.78:2
9	78108510	gridss161_5o	G	GAACAATGCTGCAGTAACAATCATCTAAATTT[9:78108542[	183.09	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=183.09;ASRP=0;ASSR=4;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm161-12;BEIDH=0;BEIDL=0;BQ=17.00;BSC=1;BSCQ=17.00;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CQ=183.09;EVENT=gridss161_5;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss161_5h;RAS=0;RASQ=0.00;REF=246;REFPAIR=21;RP=0;RPQ=0.00;SB=0.8;SC=50M1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:183.09:0:4:0:0.00:0:0.00:0.00:0:0:17.00:1:17.00:0:0.00:1:0.00:0:0.00:183.09:0.00:246:21:0:0.00:0:0.00:4
9	78108542	gridss161_5h	A	]9:78108510]AACAATGCTGCAGTAACAATCATCTAAATTTA	183.09	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=4;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm161-12;BEIDH=0;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=183.09;EVENT=gridss161_5;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss161_5o;RAS=1;RASQ=183.09;REF=263;REFPAIR=26;RP=0;RPQ=0.00;SB=1.0;SC=1X90M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:4:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:183.09:183.09:263:26:0:0.00:0:0.00:4
9	97873005	gridss163_128b	A	ACTAAGATC.	154.42	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=68.64;BASRP=0;BASSR=4;BEID=asm163-90;BEIDH=-1;BEIDL=0;BQ=154.42;BSC=5;BSCQ=85.78;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=137.28;EVENT=gridss163_128;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=289;REFPAIR=47;RP=0;RPQ=0.00;SB=0.44444445;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:68.64:0:4:154.42:5:85.78:0:0.00:5:0.00:0:0.00:0.00:0.00:289:47:0:0.00:0:0.00:0
9	97873008	gridss163_375b	T	.GTCCTCTTT	161.84	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=67.72;BASRP=0;BASSR=4;BEID=asm163-356;BEIDH=-1;BEIDL=8;BQ=161.84;BSC=5;BSCQ=94.11;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=135.45;EVENT=gridss163_375;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=295;REFPAIR=47;RP=0;RPQ=0.00;SB=0.5555556;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:67.72:0:4:161.84:5:94.11:0:0.00:5:0.00:0:0.00:0.00:0.00:295:47:0:0.00:0:0.00:0
9	109196947	gridss165_33b	T	.CTAAAGTATAATTT	115.09	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=115.09;BASRP=0;BASSR=3;BEID=asm165-33;BEIDH=-1;BEIDL=13;BQ=115.09;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=115.09;EVENT=gridss165_33;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=55;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:115.09:0:3:115.09:0:0.00:0:0.00:3:0.00:0:0.00:0.00:0.00:55:0:0:0.00:0:0.00:0
10	14940202	gridss169_428b	T	.TTTTTTTTTTTTCTTTCTTATTTTTTTTGGGGTTTTTTTTTTTT	988.72	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=351.23;BASRP=0;BASSR=16;BEID=asm169-414;BEIDH=-1;BEIDL=43;BQ=988.72;BSC=27;BSCQ=637.49;BUM=0;BUMQ=0.00;BVF=29;CAS=0;CASQ=0.00;CQ=745.40;EVENT=gridss169_428;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=117;REFPAIR=30;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:351.23:0:16:988.72:27:637.49:0:0.00:29:0.00:0:0.00:0.00:0.00:117:30:0:0.00:0:0.00:0
10	14940229	gridss169_84b	T	TTTTTTTTTACCATAGAGGCACCATTTATGCCTTTTATGAAAGAAAAATTTTCAACTATTACAC.	1246.24	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=447.67;BASRP=0;BASSR=19;BEID=asm169-25;BEIDH=-1;BEIDL=0;BQ=1246.24;BSC=35;BSCQ=798.56;BUM=0;BUMQ=0.00;BVF=35;CAS=0;CASQ=0.00;CQ=939.10;EVENT=gridss169_84;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=89;REFPAIR=31;RP=0;RPQ=0.00;SB=0.962963;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:447.67:0:19:1246.24:35:798.56:0:0.00:35:0.00:0:0.00:0.00:0.00:89:31:0:0.00:0:0.00:0
10	14946849	gridss169_10o	T	T[10:14946896[	53.22	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-21,22;CIRPOS=-8,8;CQ=53.22;EVENT=gridss169_10;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_10h;RAS=0;RASQ=0.00;REF=444;REFPAIR=43;RP=3;RPQ=53.22;SC=159M24D100M1X42N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.22:0.00:444:43:3:53.22:0:0.00:3
10	14946896	gridss169_10h	G	]10:14946849]G	53.22	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-21,22;CQ=53.22;EVENT=gridss169_10;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_10o;RAS=0;RASQ=0.00;REF=459;REFPAIR=51;RP=3;RPQ=53.22;SC=1X15N1X155M54D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.22:0.00:459:51:3:53.22:0:0.00:3
10	14947434	gridss169_13o	T	T[10:14947481[	70.97	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=45.28;BSC=2;BSCQ=45.28;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-15,16;CQ=70.97;EVENT=gridss169_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_13h;RAS=0;RASQ=0.00;REF=457;REFPAIR=58;RP=4;RPQ=70.97;SB=0.5;SC=109M63D46M2D93M1X12N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:45.28:2:45.28:0:0.00:1:0.00:0:0.00:70.97:0.00:457:58:4:70.97:0:0.00:4
10	14947481	gridss169_13h	G	]10:14947434]G	70.97	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=18.31;BSC=1;BSCQ=18.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-6,7;CQ=70.97;EVENT=gridss169_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_13o;RAS=0;RASQ=0.00;REF=446;REFPAIR=49;RP=4;RPQ=70.97;SB=1.0;SC=1X30N1X101M19D182M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:18.31:1:18.31:0:0.00:1:0.00:0:0.00:70.97:0.00:446:49:4:70.97:0:0.00:4
10	14948208	gridss169_16o	C	C[10:14948242[	52.91	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=54.71;BSC=3;BSCQ=54.71;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-1,1;CQ=52.91;EVENT=gridss169_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_16h;RAS=0;RASQ=0.00;REF=404;REFPAIR=53;RP=3;RPQ=52.91;SB=0.33333334;SC=101M77D132M1X15N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:54.71:3:54.71:0:0.00:2:0.00:0:0.00:52.91:0.00:404:53:3:52.91:0:0.00:3
10	14948242	gridss169_16h	G	]10:14948208]G	52.91	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-8,8;CQ=52.91;EVENT=gridss169_16;IC=0;IMPRECISE;IQ=0.00;PARID=gridss169_16o;RAS=0;RASQ=0.00;REF=456;REFPAIR=31;RP=3;RPQ=52.91;SC=1X1N1X100M85D139M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:52.91:0.00:456:31:3:52.91:0:0.00:3
10	24644695	gridss170_25b	T	TTTTTTTTTTTTTTGTCTATTCTTTTTTTCCTC.	152.91	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=67.45;BASRP=0;BASSR=3;BEID=asm170-20;BEIDH=-1;BEIDL=0;BQ=152.91;BSC=4;BSCQ=85.47;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=134.89;EVENT=gridss170_25;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=33;REFPAIR=3;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:67.45:0:3:152.91:4:85.47:0:0.00:4:0.00:0:0.00:0.00:0.00:33:3:0:0.00:0:0.00:0
10	67998451	gridss175_9b	T	TGTAATTTT.	189.76	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=85.25;BASRP=0;BASSR=5;BEID=asm175-1;BEIDH=-1;BEIDL=0;BQ=189.76;BSC=6;BSCQ=104.51;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=170.50;EVENT=gridss175_9;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=63;REFPAIR=17;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:85.25:0:5:189.76:6:104.51:0:0.00:6:0.00:0:0.00:0.00:0.00:63:17:0:0.00:0:0.00:0
10	69548310	gridss175_10b	G	GAGAAGTCTGAG.	443.55	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=221.77;BASRP=0;BASSR=13;BEID=asm175-8;BEIDH=-1;BEIDL=0;BQ=443.55;BSC=13;BSCQ=221.77;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=443.55;EVENT=gridss175_10;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=75;REFPAIR=14;RP=0;RPQ=0.00;SB=0.3846154;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:221.77:0:13:443.55:13:221.77:0:0.00:12:0.00:0:0.00:0.00:0.00:75:14:0:0.00:0:0.00:0
10	69548313	gridss175_26b	G	.GAGACCCTGTTCAAGAG	124.77	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=53.05;BASRP=0;BASSR=3;BEID=asm175-19;BEIDH=-1;BEIDL=16;BQ=124.77;BSC=4;BSCQ=71.72;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=106.10;EVENT=gridss175_26;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=76;REFPAIR=14;RP=0;RPQ=0.00;SB=0.42857143;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:53.05:0:3:124.77:4:71.72:0:0.00:4:0.00:0:0.00:0.00:0.00:76:14:0:0.00:0:0.00:0
10	89624562	gridss177_34o	C	C[10:89624615[	124.08	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.14;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-131;BEIDH=2;BEIDL=0;BQ=28.77;BSC=1;BSCQ=28.77;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=0,1;CQ=124.08;EVENT=gridss177_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_34h;RAS=0;RASQ=0.00;REF=324;REFPAIR=26;RP=4;RPQ=70.94;SB=1.0;SC=101M51D164M1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.14:3:0:0:0.00:0:0.00:0.00:0:0:28.77:1:28.77:0:0.00:1:0.00:0:0.00:124.08:0.00:324:26:4:70.94:0:0.00:4
10	89624615	gridss177_34h	G	]10:89624562]G	124.08	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-131;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-5,5;CQ=124.08;EVENT=gridss177_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_34o;RAS=1;RASQ=53.14;REF=311;REFPAIR=37;RP=4;RPQ=70.94;SC=2X100M60D139M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:124.08:53.14:311:37:4:70.94:0:0.00:4
10	89624974	gridss177_37o	T	T[10:89625073[	159.04	LOW_QUAL	AS=1;ASQ=70.53;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-129,asm177-1871;BEIDH=2,164;BEIDL=0,0;BQ=25.12;BSC=1;BSCQ=25.12;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-42,43;CIRPOS=-8,9;CQ=159.04;EVENT=gridss177_37;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_37h;RAS=1;RASQ=0.00;REF=379;REFPAIR=26;RP=5;RPQ=88.50;SB=0.0;SC=241M1X84N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:70.53:4:0:0:0.00:0:0.00:0.00:0:0:25.12:1:25.12:0:0.00:1:0.00:0:0.00:159.04:0.00:379:26:5:88.50:0:0.00:5
10	89625073	gridss177_37h	A	]10:89624974]A	159.04	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-129,asm177-1871;BEIDH=0,0;BEIDL=2,164;BQ=24.15;BSC=1;BSCQ=24.15;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-42,43;CQ=159.04;EVENT=gridss177_37;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_37o;RAS=1;RASQ=70.53;REF=421;REFPAIR=43;RP=5;RPQ=88.50;SB=0.0;SC=1X16N1X129M79D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:24.15:1:24.15:0:0.00:1:0.00:0:0.00:159.04:70.53:421:43:5:88.50:0:0.00:5
10	89631857	gridss177_439b	T	TTTGTGTGT.	159.90	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=58.20;BASRP=0;BASSR=3;BEID=asm177-162;BEIDH=-1;BEIDL=0;BQ=159.90;BSC=5;BSCQ=101.70;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=137.80;EVENT=gridss177_439;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=158;REFPAIR=33;RP=0;RPQ=0.00;SB=0.75;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:58.20:0:3:159.90:5:101.70:0:0.00:5:0.00:0:0.00:0.00:0.00:158:33:0:0.00:0:0.00:0
10	89634712	gridss177_59o	G	G[10:89634773[	53.65	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=55.51;BSC=3;BSCQ=55.51;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-14,15;CIRPOS=-26,26;CQ=53.65;EVENT=gridss177_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_59h;RAS=0;RASQ=0.00;REF=272;REFPAIR=18;RP=3;RPQ=53.65;SB=0.33333334;SC=101M12D184M1X28N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:55.51:3:55.51:0:0.00:3:0.00:0:0.00:53.65:0.00:272:18:3:53.65:0:0.00:3
10	89634773	gridss177_59h	T	]10:89634712]T	53.65	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=20.24;BSC=1;BSCQ=20.24;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-14,15;CQ=53.65;EVENT=gridss177_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_59o;RAS=0;RASQ=0.00;REF=217;REFPAIR=23;RP=3;RPQ=53.65;SB=0.0;SC=1X51N1X100M56D118M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.24:1:20.24:0:0.00:1:0.00:0:0.00:53.65:0.00:217:23:3:53.65:0:0.00:3
10	89636677	gridss177_2093b	T	.TTTATTTTTTTTTTTTTTTATAATTTTTAAAAAATATTTTTTTTTTTTTTTTTT	497.15	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=198.04;BASRP=0;BASSR=10;BEID=asm177-2009;BEIDH=-1;BEIDL=53;BQ=497.15;BSC=12;BSCQ=299.11;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=401.62;EVENT=gridss177_2093;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=62;REFPAIR=31;RP=0;RPQ=0.00;SB=0.04347826;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:198.04:0:10:497.15:12:299.11:0:0.00:15:0.00:0:0.00:0.00:0.00:62:31:0:0.00:0:0.00:0
10	89637480	gridss177_67o	A	A[10:89637521[	141.21	LOW_QUAL	AS=1;ASQ=53.03;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-2140,asm177-315;BEIDH=144,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-15,16;CQ=141.21;EVENT=gridss177_67;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_67h;RAS=1;RASQ=0.00;REF=238;REFPAIR=23;RP=5;RPQ=88.18;SC=307M1X18N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.03:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:141.21:0.00:238:23:5:88.18:0:0.00:5
10	89637521	gridss177_67h	A	]10:89637480]A	141.21	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-2140,asm177-315;BEIDH=0,0;BEIDL=144,2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-9,10;CQ=141.21;EVENT=gridss177_67;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_67o;RAS=1;RASQ=53.03;REF=213;REFPAIR=21;RP=5;RPQ=88.18;SC=1X30N1X292M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:141.21:53.03:213:21:5:88.18:0:0.00:5
10	89638452	gridss177_70o	T	T[10:89638502[	53.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=23.52;BSC=1;BSCQ=23.52;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-11,11;CIRPOS=-3,4;CQ=53.32;EVENT=gridss177_70;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_70h;RAS=0;RASQ=0.00;REF=377;REFPAIR=48;RP=3;RPQ=53.32;SB=0.0;SC=130M74D100M1X21N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:23.52:1:23.52:0:0.00:1:0.00:0:0.00:53.32:0.00:377:48:3:53.32:0:0.00:3
10	89638502	gridss177_70h	T	]10:89638452]T	53.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=20.40;BSC=1;BSCQ=20.40;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-3,4;CIRPOS=-11,11;CQ=53.32;EVENT=gridss177_70;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_70o;RAS=0;RASQ=0.00;REF=312;REFPAIR=39;RP=3;RPQ=53.32;SB=0.0;SC=1X6N1X179M39D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.40:1:20.40:0:0.00:1:0.00:0:0.00:53.32:0.00:312:39:3:53.32:0:0.00:3
10	89638881	gridss177_2139b	T	.ATATGT	142.95	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=49.86;BASRP=0;BASSR=3;BEID=asm177-2040;BEIDH=-1;BEIDL=5;BQ=142.95;BSC=5;BSCQ=93.08;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=99.72;EVENT=gridss177_2139;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=255;REFPAIR=29;RP=0;RPQ=0.00;SB=0.75;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:49.86:0:3:142.95:5:93.08:0:0.00:5:0.00:0:0.00:0.00:0.00:255:29:0:0.00:0:0.00:0
10	89639709	gridss177_74o	G	G[10:89639743[	159.69	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=71.11;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-421;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,2;CIRPOS=-24,25;CQ=159.69;EVENT=gridss177_74;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_74h;RAS=0;RASQ=0.00;REF=415;REFPAIR=46;RP=5;RPQ=88.58;SC=145M78D100M1X2N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:71.11:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:159.69:0.00:415:46:5:88.58:0:0.00:5
10	89639743	gridss177_74h	G	]10:89639709]G	159.69	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=4;BANRPQ=71.11;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-421;BEIDH=0;BEIDL=2;BQ=18.31;BSC=1;BSCQ=18.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-24,25;CIRPOS=-1,2;CQ=159.69;EVENT=gridss177_74;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_74o;RAS=1;RASQ=71.11;REF=426;REFPAIR=43;RP=5;RPQ=88.58;SB=1.0;SC=1X48N1X173M3D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:4:71.11:0:0.00:0.00:0:0:18.31:1:18.31:0:0.00:1:0.00:0:0.00:159.69:71.11:426:43:5:88.58:0:0.00:5
10	89640022	gridss177_76o	G	G[10:89640161[	124.35	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=71.01;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-419;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-7,7;CQ=124.35;EVENT=gridss177_76;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_76h;RAS=0;RASQ=0.00;REF=271;REFPAIR=39;RP=3;RPQ=53.34;SC=107M105D100M1X13N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:71.01:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:124.35:0.00:271:39:3:53.34:0:0.00:4
10	89640161	gridss177_76h	A	]10:89640022]A	124.35	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-419;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-7,7;CQ=124.35;EVENT=gridss177_76;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_76o;RAS=1;RASQ=71.01;REF=272;REFPAIR=24;RP=3;RPQ=53.34;SC=1X13N1X237M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:124.35:71.01:272:24:3:53.34:0:0.00:4
10	89654266	gridss177_222o	T	]10:89654315]T	175.95	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-602;BEIDH=0;BEIDL=2;BQ=17.54;BSC=1;BSCQ=17.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=105.51;EVENT=gridss177_222;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_222h;RAS=1;RASQ=105.51;REF=290;REFPAIR=32;RP=4;RPQ=70.44;SB=1.0;SC=1X16N1X364M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:17.54:1:17.54:0:0.00:1:0.00:0:0.00:175.95:105.51:290:32:4:70.44:0:0.00:6
10	89654315	gridss177_222h	C	C[10:89654266[	175.95	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=105.51;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-602;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=105.51;EVENT=gridss177_222;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_222o;RAS=0;RASQ=0.00;REF=297;REFPAIR=25;RP=4;RPQ=70.44;SC=142M14D101M52D1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:105.51:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:175.95:0.00:297:25:4:70.44:0:0.00:6
10	89676310	gridss177_115o	G	G[10:89676343[	7095.49	PASS	AS=1;ASQ=2275.76;ASRP=0;ASSR=162;BA=0;BANRP=1;BANRPQ=17.90;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-2507,asm177-642;BEIDH=0,0;BEIDL=0,0;BQ=284.32;BSC=15;BSCQ=284.32;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=0,5;CIRPOS=0,5;CQ=7051.68;EVENT=gridss177_115;HOMLEN=5;HOMSEQ=TAGGT;IC=28;IHOMPOS=0,5;IQ=1458.04;PARID=gridss177_115h;RAS=1;RASQ=2773.09;REF=183;REFPAIR=38;RP=2;RPQ=35.31;SB=0.7758621;SC=245M1X4N1X;SR=26;SRQ=553.30;SVTYPE=BND;VF=100	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:2275.76:0:162:1:17.90:0:0.00:0.00:0:0:284.32:15:284.32:0:0.00:1:0.00:28:1458.04:7095.49:2773.09:183:38:2:35.31:26:553.30:100
10	89676343	gridss177_115h	T	]10:89676310]T	7095.49	PASS	AS=1;ASQ=2773.09;ASRP=0;ASSR=162;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-2507,asm177-642;BEIDH=0,0;BEIDL=0,0;BQ=780.07;BSC=43;BSCQ=780.07;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=0,5;CIRPOS=0,5;CQ=7051.68;EVENT=gridss177_115;HOMLEN=5;HOMSEQ=TAGGT;IC=28;IHOMPOS=0,5;IQ=1458.04;PARID=gridss177_115o;RAS=1;RASQ=2275.76;REF=258;REFPAIR=47;RP=2;RPQ=35.31;SB=0.75384617;SC=1X4N1X182M25D101M;SR=26;SRQ=553.30;SVTYPE=BND;VF=100	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:2773.09:0:162:0:0.00:0:0.00:0.00:0:0:780.07:43:780.07:0:0.00:1:0.00:28:1458.04:7095.49:2275.76:258:47:2:35.31:26:553.30:100
10	89701269	gridss177_150o	A	A[10:89701343[	71.26	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=20.09;BSC=1;BSCQ=20.09;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-56,57;CQ=71.26;EVENT=gridss177_150;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_150h;RAS=0;RASQ=0.00;REF=349;REFPAIR=30;RP=4;RPQ=71.26;SB=1.0;SC=192M21D100M1X12N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:20.09:1:20.09:0:0.00:1:0.00:0:0.00:71.26:0.00:349:30:4:71.26:0:0.00:4
10	89701343	gridss177_150h	T	]10:89701269]T	71.26	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=35.92;BSC=2;BSCQ=35.92;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-56,57;CIRPOS=-6,7;CQ=71.26;EVENT=gridss177_150;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_150o;RAS=0;RASQ=0.00;REF=263;REFPAIR=23;RP=4;RPQ=71.26;SB=0.5;SC=1X112N1X213M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:35.92:2:35.92:0:0.00:2:0.00:0:0.00:71.26:0.00:263:23:4:71.26:0:0.00:4
10	89705121	gridss177_157o	C	C[10:89705194[	53.43	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=89.55;BSC=4;BSCQ=89.55;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-12,12;CIRPOS=-51,52;CQ=53.43;EVENT=gridss177_157;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_157h;RAS=0;RASQ=0.00;REF=486;REFPAIR=40;RP=3;RPQ=53.43;SB=0.75;SC=101M87D114M1X23N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:89.55:4:89.55:0:0.00:4:0.00:0:0.00:53.43:0.00:486:40:3:53.43:0:0.00:3
10	89705194	gridss177_157h	G	]10:89705121]G	53.43	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=75.50;BSC=4;BSCQ=75.50;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-51,52;CIRPOS=-12,12;CQ=53.43;EVENT=gridss177_157;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_157o;RAS=0;RASQ=0.00;REF=479;REFPAIR=31;RP=3;RPQ=53.43;SB=0.5;SC=1X102N1X100M17D106M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:75.50:4:75.50:0:0.00:4:0.00:0:0.00:53.43:0.00:479:31:3:53.43:0:0.00:3
10	89717065	gridss177_184o	T	T[10:89717162[	123.68	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.09;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1287;BEIDH=2;BEIDL=0;BQ=17.54;BSC=1;BSCQ=17.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-17,17;CQ=106.24;EVENT=gridss177_184;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_184h;RAS=0;RASQ=0.00;REF=182;REFPAIR=22;RP=4;RPQ=70.59;SB=1.0;SC=231M1X9N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.09:3:0:0:0.00:0:0.00:0.00:0:0:17.54:1:17.54:0:0.00:1:0.00:0:0.00:123.68:0.00:182:22:4:70.59:0:0.00:5
10	89717162	gridss177_184h	T	]10:89717065]T	123.68	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=35.36;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm177-1287;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-5,5;CQ=106.24;EVENT=gridss177_184;IC=0;IMPRECISE;IQ=0.00;PARID=gridss177_184o;RAS=1;RASQ=53.09;REF=250;REFPAIR=25;RP=4;RPQ=70.59;SC=1X33N1X282M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:2:35.36:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:123.68:53.09:250:25:4:70.59:0:0.00:5
10	89726661	gridss177_3141b	T	.AAATATTACAAAAATAAATTAATTATTTTTTTTTTAAAAAATTGGGGT	643.17	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=64.68;BASRP=0;BASSR=3;BEID=asm177-3336;BEIDH=-1;BEIDL=47;BQ=643.17;BSC=23;BSCQ=578.49;BUM=0;BUMQ=0.00;BVF=23;CAS=0;CASQ=0.00;CQ=174.06;EVENT=gridss177_3141;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=81;REFPAIR=24;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:64.68:0:3:643.17:23:578.49:0:0.00:23:0.00:0:0.00:0.00:0.00:81:24:0:0.00:0:0.00:0
10	89728692	gridss177_1652b	A	AAAAATGGCCAAAAAAAAAAAAATTTTTTTTTTTTGTTTTTTTTAATAAAAAAAAAATTT.	1125.79	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=220.70;BASRP=0;BASSR=9;BEID=asm177-1453,asm177-1476;BEIDH=-1,-1;BEIDL=0,0;BQ=1125.79;BSC=35;BSCQ=905.09;BUM=0;BUMQ=0.00;BVF=35;CAS=0;CASQ=0.00;CQ=860.85;EVENT=gridss177_1652;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=90;REFPAIR=44;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:220.70:0:9:1125.79:35:905.09:0:0.00:35:0.00:0:0.00:0.00:0.00:90:44:0:0.00:0:0.00:0
10	123215328	gridss180_59b	T	.CCCTTTTTTTGTAATATCCATGGGTTTTAATATTTAAAAATTTTCTTTCCTTTTTTT	1237.14	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=489.31;BASRP=0;BASSR=20;BEID=asm180-50;BEIDH=-1;BEIDL=56;BQ=1237.14;BSC=29;BSCQ=747.83;BUM=0;BUMQ=0.00;BVF=31;CAS=0;CASQ=0.00;CQ=1126.95;EVENT=gridss180_59;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=73;REFPAIR=40;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:489.31:0:20:1237.14:29:747.83:0:0.00:31:0.00:0:0.00:0.00:0.00:73:40:0:0.00:0:0.00:0
10	123215349	gridss180_16b	T	TTTTGAG.	324.09	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=109.70;BASRP=0;BASSR=6;BEID=asm180-6;BEIDH=-1;BEIDL=0;BQ=324.09;BSC=11;BSCQ=214.39;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=219.40;EVENT=gridss180_16;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=53;REFPAIR=13;RP=0;RPQ=0.00;SB=0.64705884;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:109.70:0:6:324.09:11:214.39:0:0.00:9:0.00:0:0.00:0.00:0.00:53:13:0:0.00:0:0.00:0
11	22644780	gridss184_8o	T	T[11:22644848[	53.68	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-28,28;CQ=53.68;EVENT=gridss184_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss184_8h;RAS=0;RASQ=0.00;REF=295;REFPAIR=27;RP=3;RPQ=53.68;SC=184M3D100M1X38N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.68:0.00:295:27:3:53.68:0:0.00:3
11	22644848	gridss184_8h	T	]11:22644780]T	53.68	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=17.00;BSC=1;BSCQ=17.00;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-19,20;CQ=53.68;EVENT=gridss184_8;IC=0;IMPRECISE;IQ=0.00;PARID=gridss184_8o;RAS=0;RASQ=0.00;REF=248;REFPAIR=20;RP=3;RPQ=53.68;SB=0.0;SC=1X55N1X99M8D163M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:17.00:1:17.00:0:0.00:1:0.00:0:0.00:53.68:0.00:248:20:3:53.68:0:0.00:3
11	61082318	gridss187_193b	T	TGGAAGGTGTATCTTCTGTTCCCCC.	626.85	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=73.23;BASRP=0;BASSR=4;BEID=asm187-134;BEIDH=-1;BEIDL=0;BQ=626.85;BSC=27;BSCQ=553.62;BUM=0;BUMQ=0.00;BVF=27;CAS=0;CASQ=0.00;CQ=250.94;EVENT=gridss187_193;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=106;REFPAIR=19;RP=0;RPQ=0.00;SB=0.9032258;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:73.23:0:4:626.85:27:553.62:0:0.00:27:0.00:0:0.00:0.00:0.00:106:19:0:0.00:0:0.00:0
11	61089948	gridss187_34o	T	T[11:61090024[	53.47	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=93.55;BSC=4;BSCQ=93.55;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-38,39;CIRPOS=-17,17;CQ=53.47;EVENT=gridss187_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_34h;RAS=0;RASQ=0.00;REF=352;REFPAIR=20;RP=3;RPQ=53.47;SB=0.25;SC=101M44D104M1X76N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:93.55:4:93.55:0:0.00:4:0.00:0:0.00:53.47:0.00:352:20:3:53.47:0:0.00:3
11	61090024	gridss187_34h	A	]11:61089948]A	53.47	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=38.88;BSC=2;BSCQ=38.88;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-38,39;CQ=53.47;EVENT=gridss187_34;IC=0;IMPRECISE;IQ=0.00;PARID=gridss187_34o;RAS=0;RASQ=0.00;REF=373;REFPAIR=43;RP=3;RPQ=53.47;SB=0.5;SC=1X33N1X100M25D167M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:38.88:2:38.88:0:0.00:2:0.00:0:0.00:53.47:0.00:373:43:3:53.47:0:0.00:3
11	61099586	gridss187_388b	A	AAAGTCCCAGG.	239.16	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=100.86;BASRP=0;BASSR=6;BEID=asm187-376;BEIDH=-1;BEIDL=0;BQ=239.16;BSC=8;BSCQ=138.30;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=201.73;EVENT=gridss187_388;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=393;REFPAIR=37;RP=0;RPQ=0.00;SB=0.9285714;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:100.86:0:6:239.16:8:138.30:0:0.00:8:0.00:0:0.00:0.00:0.00:393:37:0:0.00:0:0.00:0
11	94153475	gridss191_30o	T	T[11:94153585[	123.40	LOW_QUAL	AS=1;ASQ=52.72;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=17.97;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-1088,asm191-122;BEIDH=142,2;BEIDL=0,0;BQ=78.96;BSC=3;BSCQ=78.96;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-47,48;CIRPOS=-6,6;CQ=123.40;EVENT=gridss191_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_30h;RAS=1;RASQ=0.00;REF=222;REFPAIR=28;RP=4;RPQ=70.68;SB=0.33333334;SC=231M1X94N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.72:3:0:1:17.97:0:0.00:0.00:0:0:78.96:3:78.96:0:0.00:3:0.00:0:0.00:123.40:0.00:222:28:4:70.68:0:0.00:4
11	94153585	gridss191_30h	T	]11:94153475]T	123.40	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-1088,asm191-122;BEIDH=0,0;BEIDL=142,2;BQ=26.39;BSC=1;BSCQ=26.39;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-47,48;CQ=123.40;EVENT=gridss191_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_30o;RAS=1;RASQ=52.72;REF=250;REFPAIR=31;RP=4;RPQ=70.68;SB=1.0;SC=1X11N1X166M47D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:26.39:1:26.39:0:0.00:1:0.00:0:0.00:123.40:52.72:250:31:4:70.68:0:0.00:4
11	94153628	gridss191_33o	C	C[11:94153804[	87.80	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=52.88;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-120;BEIDH=2;BEIDL=0;BQ=17.54;BSC=1;BSCQ=17.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=0,1;CQ=105.76;EVENT=gridss191_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_33h;RAS=0;RASQ=0.00;REF=236;REFPAIR=29;RP=2;RPQ=34.91;SB=0.0;SC=145M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.88:3:0:0:0.00:0:0.00:0.00:0:0:17.54:1:17.54:0:0.00:1:0.00:0:0.00:87.80:0.00:236:29:2:34.91:0:0.00:3
11	94153804	gridss191_33h	A	]11:94153628]A	87.80	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm191-120;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=0,1;CQ=105.76;EVENT=gridss191_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_33o;RAS=1;RASQ=52.88;REF=243;REFPAIR=23;RP=2;RPQ=34.91;SC=2X168M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:87.80:52.88:243:23:2:34.91:0:0.00:3
11	94155713	gridss191_1094b	A	.AGCTACA	100.49	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=50.24;BASRP=0;BASSR=3;BEID=asm191-1052;BEIDH=-1;BEIDL=6;BQ=100.49;BSC=3;BSCQ=50.24;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=100.49;EVENT=gridss191_1094;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=180;REFPAIR=30;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:50.24:0:3:100.49:3:50.24:0:0.00:3:0.00:0:0.00:0.00:0.00:180:30:0:0.00:0:0.00:0
11	94173611	gridss191_394b	A	AATCCTCAAAAGCAATCAAAAGCTGAGAACAAAACAAGGAA.	174.54	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=63.01;BASRP=0;BASSR=3;BEID=asm191-294;BEIDH=-1;BEIDL=0;BQ=174.54;BSC=5;BSCQ=111.53;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=126.03;EVENT=gridss191_394;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=158;REFPAIR=16;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:63.01:0:3:174.54:5:111.53:0:0.00:5:0.00:0:0.00:0.00:0.00:158:16:0:0.00:0:0.00:0
11	94189482	gridss191_65o	C	C[11:94189528[	53.31	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-11,12;CIRPOS=-19,19;CQ=53.31;EVENT=gridss191_65;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_65h;RAS=0;RASQ=0.00;REF=380;REFPAIR=32;RP=3;RPQ=53.31;SC=78M83D119M1X22N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.31:0.00:380:32:3:53.31:0:0.00:3
11	94189528	gridss191_65h	C	]11:94189482]C	53.31	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-19,19;CIRPOS=-11,12;CQ=53.31;EVENT=gridss191_65;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_65o;RAS=0;RASQ=0.00;REF=330;REFPAIR=26;RP=3;RPQ=53.31;SC=1X37N1X100M85D103M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.31:0.00:330:26:3:53.31:0:0.00:3
11	94198562	gridss191_1439b	T	.TTTTCCAAAATAAAGAAAACTAAGGTAATTCCCAAAAGAAATTAATTTTTTATTTACCAAGACCAACTTCCTCCCCCCTT	839.40	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=176.86;BASRP=0;BASSR=6;BEID=asm191-1435;BEIDH=-1;BEIDL=79;BQ=839.40;BSC=26;BSCQ=662.54;BUM=0;BUMQ=0.00;BVF=26;CAS=0;CASQ=0.00;CQ=728.41;EVENT=gridss191_1439;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=93;REFPAIR=40;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:176.86:0:6:839.40:26:662.54:0:0.00:26:0.00:0:0.00:0.00:0.00:93:40:0:0.00:0:0.00:0
11	94203844	gridss191_80o	T	T[11:94203892[	53.12	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=76.60;BSC=3;BSCQ=76.60;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-5,5;CQ=53.12;EVENT=gridss191_80;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_80h;RAS=0;RASQ=0.00;REF=371;REFPAIR=37;RP=3;RPQ=53.12;SB=0.0;SC=146M41D100M1X41N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:76.60:3:76.60:0:0.00:3:0.00:0:0.00:53.12:0.00:371:37:3:53.12:0:0.00:3
11	94203892	gridss191_80h	T	]11:94203844]T	53.12	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=24.33;BSC=1;BSCQ=24.33;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-21,21;CQ=53.12;EVENT=gridss191_80;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_80o;RAS=0;RASQ=0.00;REF=301;REFPAIR=34;RP=3;RPQ=53.12;SB=1.0;SC=1X9N1X129M86D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:24.33:1:24.33:0:0.00:1:0.00:0:0.00:53.12:0.00:301:34:3:53.12:0:0.00:3
11	94224330	gridss191_102o	C	C[11:94224426[	70.80	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=35.09;BSC=2;BSCQ=35.09;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-36,37;CQ=70.80;EVENT=gridss191_102;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_102h;RAS=0;RASQ=0.00;REF=263;REFPAIR=19;RP=4;RPQ=70.80;SB=0.0;SC=101M8D200M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:35.09:2:35.09:0:0.00:2:0.00:0:0.00:70.80:0.00:263:19:4:70.80:0:0.00:4
11	94224426	gridss191_102h	C	]11:94224330]C	70.80	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=24.15;BSC=1;BSCQ=24.15;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-36,37;CIRPOS=-8,9;CQ=70.80;EVENT=gridss191_102;IC=0;IMPRECISE;IQ=0.00;PARID=gridss191_102o;RAS=0;RASQ=0.00;REF=229;REFPAIR=20;RP=4;RPQ=70.80;SB=0.0;SC=1X72N1X253M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:24.15:1:24.15:0:0.00:1:0.00:0:0.00:70.80:0.00:229:20:4:70.80:0:0.00:4
11	108099190	gridss192_31o	G	G[11:108099254[	53.43	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=38.52;BSC=2;BSCQ=38.52;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-25,25;CIRPOS=-16,16;CQ=53.43;EVENT=gridss192_31;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_31h;RAS=0;RASQ=0.00;REF=304;REFPAIR=37;RP=3;RPQ=53.43;SB=0.0;SC=101M24D151M1X49N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:38.52:2:38.52:0:0.00:2:0.00:0:0.00:53.43:0.00:304:37:3:53.43:0:0.00:3
11	108099254	gridss192_31h	T	]11:108099190]T	53.43	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=41.74;BSC=2;BSCQ=41.74;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-16,16;CIRPOS=-25,25;CQ=53.43;EVENT=gridss192_31;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_31o;RAS=0;RASQ=0.00;REF=376;REFPAIR=31;RP=3;RPQ=53.43;SB=1.0;SC=1X31N1X100M70D124M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:41.74:2:41.74:0:0.00:2:0.00:0:0.00:53.43:0.00:376:31:3:53.43:0:0.00:3
11	108099920	gridss192_33o	T	T[11:108100097[	141.52	LOW_QUAL	AS=1;ASQ=70.76;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-143,asm192-2455;BEIDH=2,161;BEIDL=0,0;BQ=47.63;BSC=2;BSCQ=47.63;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-8,8;CQ=141.52;EVENT=gridss192_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_33h;RAS=1;RASQ=0.00;REF=264;REFPAIR=29;RP=4;RPQ=70.76;SB=0.0;SC=101M49D160M1X15N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:70.76:4:0:0:0.00:0:0.00:0.00:0:0:47.63:2:47.63:0:0.00:2:0.00:0:0.00:141.52:0.00:264:29:4:70.76:0:0.00:4
11	108100097	gridss192_33h	T	]11:108099920]T	141.52	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-143,asm192-2455;BEIDH=0,0;BEIDL=2,161;BQ=685.85;BSC=29;BSCQ=685.85;BUM=0;BUMQ=0.00;BVF=29;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-8,8;CQ=141.52;EVENT=gridss192_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_33o;RAS=1;RASQ=70.76;REF=199;REFPAIR=40;RP=4;RPQ=70.76;SB=0.0;SC=1X15N1X161M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:685.85:29:685.85:0:0.00:29:0.00:0:0.00:141.52:70.76:199:40:4:70.76:0:0.00:4
11	108107620	gridss192_42o	G	G[11:108107672[	70.87	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-2544;BEIDH=120;BEIDL=0;BQ=48.10;BSC=2;BSCQ=48.10;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=0,1;CQ=70.87;EVENT=gridss192_42;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_42h;RAS=1;RASQ=0.00;REF=359;REFPAIR=28;RP=4;RPQ=70.87;SB=0.5;SC=101M44D129M1X51N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:48.10:2:48.10:0:0.00:2:0.00:0:0.00:70.87:0.00:359:28:4:70.87:0:0.00:4
11	108107672	gridss192_42h	T	]11:108107620]T	70.87	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-2544;BEIDH=0;BEIDL=120;BQ=21.20;BSC=1;BSCQ=21.20;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-26,26;CQ=70.87;EVENT=gridss192_42;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_42o;RAS=0;RASQ=0.00;REF=352;REFPAIR=37;RP=4;RPQ=70.87;SB=1.0;SC=2X100M37D188M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:21.20:1:21.20:0:0.00:1:0.00:0:0.00:70.87:0.00:352:37:4:70.87:0:0.00:4
11	108108040	gridss192_46o	T	T[11:108108099[	71.06	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-31,32;CIRPOS=-18,18;CQ=71.06;EVENT=gridss192_46;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_46h;RAS=0;RASQ=0.00;REF=341;REFPAIR=26;RP=4;RPQ=71.06;SB=1.0;SC=135M28D100M1X62N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:71.06:0.00:341:26:4:71.06:0:0.00:4
11	108108099	gridss192_46h	C	]11:108108040]C	71.06	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=53.17;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=34.38;BSC=2;BSCQ=34.38;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-31,32;CQ=71.06;EVENT=gridss192_46;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_46o;RAS=0;RASQ=0.00;REF=412;REFPAIR=34;RP=4;RPQ=71.06;SB=0.0;SC=1X35N1X121M2D167M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:53.17:0:0.00:0.00:0:0:34.38:2:34.38:0:0.00:2:0.00:0:0.00:71.06:0.00:412:34:4:71.06:0:0.00:4
11	108116569	gridss192_634b	T	TTTTTCACAGAGGGCCAATTTTTGTCTCTTGA.	284.22	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=75.93;BASRP=0;BASSR=4;BEID=asm192-315;BEIDH=-1;BEIDL=0;BQ=284.22;BSC=11;BSCQ=208.29;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=169.40;EVENT=gridss192_634;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=60;REFPAIR=19;RP=0;RPQ=0.00;SB=0.8;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:75.93:0:4:284.22:11:208.29:0:0.00:10:0.00:0:0.00:0.00:0.00:60:19:0:0.00:0:0.00:0
11	108123571	gridss192_76o	A	A[11:108123661[	53.67	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-24,24;CIRPOS=-46,46;CQ=53.67;EVENT=gridss192_76;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_76h;RAS=0;RASQ=0.00;REF=318;REFPAIR=25;RP=3;RPQ=53.67;SC=101M23D154M1X47N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.67:0.00:318:25:3:53.67:0:0.00:3
11	108123661	gridss192_76h	T	]11:108123571]T	53.67	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-46,46;CIRPOS=-24,24;CQ=53.67;EVENT=gridss192_76;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_76o;RAS=0;RASQ=0.00;REF=272;REFPAIR=32;RP=3;RPQ=53.67;SC=1X91N1X234M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.67:0.00:272:32:3:53.67:0:0.00:3
11	108123942	gridss192_77o	T	T[11:108124023[	142.33	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=71.16;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-513;BEIDH=2;BEIDL=0;BQ=25.12;BSC=1;BSCQ=25.12;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-37,37;CIRPOS=-37,37;CQ=142.33;EVENT=gridss192_77;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_77h;RAS=0;RASQ=0.00;REF=250;REFPAIR=16;RP=4;RPQ=71.16;SB=0.0;SC=252M1X73N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:71.16:4:0:0:0.00:0:0.00:0.00:0:0:25.12:1:25.12:0:0.00:1:0.00:0:0.00:142.33:0.00:250:16:4:71.16:0:0.00:4
11	108124023	gridss192_77h	A	]11:108123942]A	142.33	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-513;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-37,37;CIRPOS=-37,37;CQ=142.33;EVENT=gridss192_77;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_77o;RAS=1;RASQ=71.16;REF=255;REFPAIR=21;RP=4;RPQ=71.16;SC=1X73N1X198M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:142.33:71.16:255:21:4:71.16:0:0.00:4
11	108124671	gridss192_81o	A	A[11:108124729[	53.26	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=48.38;BSC=2;BSCQ=48.38;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-11,12;CIRPOS=-15,16;CQ=53.26;EVENT=gridss192_81;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_81h;RAS=0;RASQ=0.00;REF=333;REFPAIR=25;RP=3;RPQ=53.26;SB=1.0;SC=101M74D137M1X22N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:48.38:2:48.38:0:0.00:2:0.00:0:0.00:53.26:0.00:333:25:3:53.26:0:0.00:3
11	108124729	gridss192_81h	G	]11:108124671]G	53.26	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=43.43;BSC=2;BSCQ=43.43;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-11,12;CQ=53.26;EVENT=gridss192_81;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_81o;RAS=0;RASQ=0.00;REF=266;REFPAIR=23;RP=3;RPQ=53.26;SB=0.0;SC=1X30N1X91M60D144M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:43.43:2:43.43:0:0.00:1:0.00:0:0.00:53.26:0.00:266:23:3:53.26:0:0.00:3
11	108125139	gridss192_84o	G	G[11:108125202[	135.04	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=58.40;ASRP=2;ASSR=1;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-419;BEIDH=43;BEIDL=0;BQ=19.80;BSC=1;BSCQ=19.80;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=0,5;CIRPOS=0,5;CQ=135.04;EVENT=gridss192_84;HOMLEN=5;HOMSEQ=CATCT;IC=0;IHOMPOS=0,5;IQ=0.00;PARID=gridss192_84h;RAS=0;RASQ=0.00;REF=478;REFPAIR=41;RP=3;RPQ=53.13;SB=1.0;SC=255M1X4N1X;SR=1;SRQ=23.52;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:58.40:2:1:0:0.00:0:0.00:0.00:0:0:19.80:1:19.80:0:0.00:1:0.00:0:0.00:135.04:0.00:478:41:3:53.13:1:23.52:6
11	108125202	gridss192_84h	C	]11:108125139]C	135.04	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=2;ASSR=1;BA=0;BANRP=2;BANRPQ=35.37;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-419;BEIDH=0;BEIDL=43;BQ=39.03;BSC=2;BSCQ=39.03;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=0,5;CIRPOS=0,5;CQ=135.04;EVENT=gridss192_84;HOMLEN=5;HOMSEQ=CATCT;IC=0;IHOMPOS=0,5;IQ=0.00;PARID=gridss192_84o;RAS=1;RASQ=58.40;REF=553;REFPAIR=56;RP=3;RPQ=53.13;SB=0.75;SC=1X4N1X164M1D101M;SR=1;SRQ=23.52;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:2:1:2:35.37:0:0.00:0.00:0:0:39.03:2:39.03:0:0.00:2:0.00:0:0.00:135.04:58.40:553:56:3:53.13:1:23.52:6
11	108130779	gridss192_884b	T	TTTAGAAAATGTTTTTCTTTTTT.	200.57	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=71.89;BASRP=0;BASSR=4;BEID=asm192-565;BEIDH=-1;BEIDL=0;BQ=200.57;BSC=7;BSCQ=128.68;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=143.77;EVENT=gridss192_884;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=67;REFPAIR=12;RP=0;RPQ=0.00;SB=0.90909094;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:71.89:0:4:200.57:7:128.68:0:0.00:7:0.00:0:0.00:0.00:0.00:67:12:0:0.00:0:0.00:0
11	108139474	gridss192_97o	T	T[11:108139575[	175.50	LOW_QUAL	AS=1;ASQ=87.75;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-2979,asm192-788;BEIDH=238,2;BEIDL=0,0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=175.50;EVENT=gridss192_97;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_97h;RAS=1;RASQ=0.00;REF=425;REFPAIR=38;RP=5;RPQ=87.75;SC=317M1X8N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:87.75:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:175.50:0.00:425:38:5:87.75:0:0.00:5
11	108139575	gridss192_97h	T	]11:108139474]T	175.50	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-2979,asm192-788;BEIDH=0,0;BEIDL=238,2;BQ=22.80;BSC=1;BSCQ=22.80;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-4,5;CQ=175.50;EVENT=gridss192_97;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_97o;RAS=1;RASQ=87.75;REF=289;REFPAIR=26;RP=5;RPQ=87.75;SB=0.0;SC=1X8N1X220M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:22.80:1:22.80:0:0.00:1:0.00:0:0.00:175.50:87.75:289:26:5:87.75:0:0.00:5
11	108140730	gridss192_99o	A	A[11:108140808[	106.41	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.20;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-789;BEIDH=2;BEIDL=0;BQ=36.40;BSC=2;BSCQ=36.40;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-8,8;CQ=106.41;EVENT=gridss192_99;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_99h;RAS=0;RASQ=0.00;REF=173;REFPAIR=17;RP=3;RPQ=53.20;SB=0.0;SC=101M8D201M1X15N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.20:3:0:0:0.00:0:0.00:0.00:0:0:36.40:2:36.40:0:0.00:2:0.00:0:0.00:106.41:0.00:173:17:3:53.20:0:0.00:3
11	108140808	gridss192_99h	A	]11:108140730]A	106.41	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-789;BEIDH=0;BEIDL=2;BQ=19.61;BSC=1;BSCQ=19.61;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-8,8;CQ=106.41;EVENT=gridss192_99;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_99o;RAS=1;RASQ=53.20;REF=162;REFPAIR=10;RP=3;RPQ=53.20;SB=0.0;SC=1X15N1X248M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:19.61:1:19.61:0:0.00:1:0.00:0:0.00:106.41:53.20:162:10:3:53.20:0:0.00:3
11	108155065	gridss192_122o	C	C[11:108155158[	177.27	LOW_QUAL	AS=1;ASQ=88.63;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-3168,asm192-993;BEIDH=169,2;BEIDL=0,0;BQ=37.91;BSC=2;BSCQ=37.91;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-30,30;CIRPOS=-30,30;CQ=177.27;EVENT=gridss192_122;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_122h;RAS=1;RASQ=0.00;REF=297;REFPAIR=28;RP=5;RPQ=88.63;SB=0.0;SC=266M1X59N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:88.63:5:0:0:0.00:0:0.00:0.00:0:0:37.91:2:37.91:0:0.00:2:0.00:0:0.00:177.27:0.00:297:28:5:88.63:0:0.00:5
11	108155158	gridss192_122h	G	]11:108155065]G	177.27	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-3168,asm192-993;BEIDH=0,0;BEIDL=169,2;BQ=101.29;BSC=5;BSCQ=101.29;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-30,30;CIRPOS=-30,30;CQ=177.27;EVENT=gridss192_122;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_122o;RAS=1;RASQ=88.63;REF=440;REFPAIR=34;RP=5;RPQ=88.63;SB=0.6;SC=1X59N1X221M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:101.29:5:101.29:0:0.00:4:0.00:0:0.00:177.27:88.63:440:34:5:88.63:0:0.00:5
11	108159229	gridss192_3012b	T	.TTTTGGTTTTTTTTTTTGTTTTTTGAAAATTTTTTTTTTTTT	368.24	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=76.00;BASRP=0;BASSR=4;BEID=asm192-3185;BEIDH=-1;BEIDL=41;BQ=368.24;BSC=12;BSCQ=292.24;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=265.35;EVENT=gridss192_3012;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=94;REFPAIR=20;RP=0;RPQ=0.00;SB=0.05263158;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:76.00:0:4:368.24:12:292.24:0:0.00:12:0.00:0:0.00:0.00:0.00:94:20:0:0.00:0:0.00:0
11	108159245	gridss192_1173b	T	TAATTGGGCCATATGGTCTCTGTCTTGAAAATATAATTAATTTTTTATTA.	760.67	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=137.44;BASRP=0;BASSR=5;BEID=asm192-1013;BEIDH=-1;BEIDL=0;BQ=760.67;BSC=23;BSCQ=623.23;BUM=0;BUMQ=0.00;BVF=23;CAS=0;CASQ=0.00;CQ=274.89;EVENT=gridss192_1173;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=109;REFPAIR=17;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:137.44:0:5:760.67:23:623.23:0:0.00:23:0.00:0:0.00:0.00:0.00:109:17:0:0.00:0:0.00:0
11	108159907	gridss192_9o	A	A]X:11644484]	67.14	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,0;CIRPOS=-2,0;CQ=67.14;EVENT=gridss192_9;HOMLEN=2;HOMSEQ=AA;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss192_9h;RAS=0;RASQ=0.00;REF=195;REFPAIR=20;RP=0;RPQ=0.00;SB=0.0;SC=27M1X1N1X;SR=2;SRQ=67.14;SVTYPE=BND;VF=2	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:67.14:0.00:195:20:0:0.00:2:67.14:2
11	108161569	gridss192_1208b	A	AACTTATTTCCCCAATTCTAAAATTCTAAAAAAGTATTTTCAAATTTTTAAAATTATTTTCCTAGCTTTT.	338.16	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=94.87;BASRP=0;BASSR=4;BEID=asm192-1029;BEIDH=-1;BEIDL=0;BQ=338.16;BSC=10;BSCQ=243.29;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=211.30;EVENT=gridss192_1208;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=84;REFPAIR=6;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:94.87:0:4:338.16:10:243.29:0:0.00:10:0.00:0:0.00:0.00:0.00:84:6:0:0.00:0:0.00:0
11	108172908	gridss192_154o	A	A[11:108172956[	53.34	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=83.23;BSC=4;BSCQ=83.23;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-8,9;CQ=53.34;EVENT=gridss192_154;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_154h;RAS=0;RASQ=0.00;REF=436;REFPAIR=40;RP=3;RPQ=53.34;SB=0.0;SC=168M14D100M1X43N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:83.23:4:83.23:0:0.00:4:0.00:0:0.00:53.34:0.00:436:40:3:53.34:0:0.00:3
11	108172956	gridss192_154h	A	]11:108172908]A	53.34	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=91.02;BSC=3;BSCQ=91.02;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-22,22;CQ=53.34;EVENT=gridss192_154;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_154o;RAS=0;RASQ=0.00;REF=486;REFPAIR=35;RP=3;RPQ=53.34;SB=0.6666667;SC=1X16N1X176M32D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:91.02:3:91.02:0:0.00:3:0.00:0:0.00:53.34:0.00:486:35:3:53.34:0:0.00:3
11	108173651	gridss192_156o	T	T[11:108173692[	53.28	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-26,26;CQ=53.28;EVENT=gridss192_156;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_156h;RAS=0;RASQ=0.00;REF=374;REFPAIR=48;RP=3;RPQ=53.28;SB=1.0;SC=93M63D149M1X12N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:53.28:0.00:374:48:3:53.28:0:0.00:3
11	108173692	gridss192_156h	G	]11:108173651]G	53.28	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=17.76;BSC=1;BSCQ=17.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-6,7;CQ=53.28;EVENT=gridss192_156;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_156o;RAS=0;RASQ=0.00;REF=381;REFPAIR=44;RP=3;RPQ=53.28;SB=0.0;SC=1X51N1X100M63D111M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:17.76:1:17.76:0:0.00:1:0.00:0:0.00:53.28:0.00:381:44:3:53.28:0:0.00:3
11	108178684	gridss192_166o	T	T[11:108178729[	70.73	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=71.16;BSC=3;BSCQ=71.16;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-11,12;CIRPOS=-18,18;CQ=70.73;EVENT=gridss192_166;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_166h;RAS=0;RASQ=0.00;REF=492;REFPAIR=56;RP=4;RPQ=70.73;SB=1.0;SC=155M32D116M1X22N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:71.16:3:71.16:0:0.00:3:0.00:0:0.00:70.73:0.00:492:56:4:70.73:0:0.00:4
11	108178729	gridss192_166h	G	]11:108178684]G	70.73	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=95.85;BSC=5;BSCQ=95.85;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-11,12;CQ=70.73;EVENT=gridss192_166;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_166o;RAS=0;RASQ=0.00;REF=511;REFPAIR=58;RP=4;RPQ=70.73;SB=0.8;SC=1X35N1X290M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:95.85:5:95.85:0:0.00:5:0.00:0:0.00:70.73:0.00:511:58:4:70.73:0:0.00:4
11	108185194	gridss192_1530b	T	TTCTGTGTTATAATCCTG.	153.50	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=55.55;BASRP=0;BASSR=3;BEID=asm192-1417;BEIDH=-1;BEIDL=0;BQ=153.50;BSC=5;BSCQ=97.95;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=111.10;EVENT=gridss192_1530;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=150;REFPAIR=13;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:55.55:0:3:153.50:5:97.95:0:0.00:5:0.00:0:0.00:0.00:0.00:150:13:0:0.00:0:0.00:0
11	108195977	gridss192_3471b	T	.TTATTTTAATTTTATTTCTTATTTTCAAGCATTTTCTTAT	335.77	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=2;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=120.08;BASRP=0;BASSR=5;BEID=asm192-3684,asm192-3691;BEIDH=-1,-1;BEIDL=64,39;BQ=335.77;BSC=9;BSCQ=215.69;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=288.40;EVENT=gridss192_3471;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=136;REFPAIR=47;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:120.08:0:5:335.77:9:215.69:0:0.00:9:0.00:0:0.00:0.00:0.00:136:47:0:0.00:0:0.00:0
11	108201625	gridss192_206o	T	T[11:108201764[	107	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.50;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1709;BEIDH=2;BEIDL=0;BQ=18.67;BSC=1;BSCQ=18.67;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-26,26;CQ=107.00;EVENT=gridss192_206;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_206h;RAS=0;RASQ=0.00;REF=326;REFPAIR=29;RP=3;RPQ=53.50;SB=0.0;SC=101M34D139M1X51N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.50:3:0:0:0.00:0:0.00:0.00:0:0:18.67:1:18.67:0:0.00:1:0.00:0:0.00:107.00:0.00:326:29:3:53.50:0:0.00:3
11	108201764	gridss192_206h	T	]11:108201625]T	107	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1709;BEIDH=0;BEIDL=2;BQ=54.23;BSC=2;BSCQ=54.23;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-26,26;CQ=107.00;EVENT=gridss192_206;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_206o;RAS=1;RASQ=53.50;REF=440;REFPAIR=38;RP=3;RPQ=53.50;SB=0.0;SC=1X51N1X198M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:54.23:2:54.23:0:0.00:2:0.00:0:0.00:107.00:53.50:440:38:3:53.50:0:0.00:3
11	108205793	gridss192_218o	A	A[11:108205846[	123.48	LOW_QUAL	AS=1;ASQ=52.81;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1809,asm192-3951;BEIDH=2,135;BEIDL=0,0;BQ=18.67;BSC=1;BSCQ=18.67;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-10,11;CIRPOS=-23,23;CQ=123.48;EVENT=gridss192_218;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_218h;RAS=1;RASQ=0.00;REF=443;REFPAIR=44;RP=4;RPQ=70.67;SB=0.0;SC=101M70D134M1X20N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.81:3:0:0:0.00:0:0.00:0.00:0:0:18.67:1:18.67:0:0.00:1:0.00:0:0.00:123.48:0.00:443:44:4:70.67:0:0.00:4
11	108205846	gridss192_218h	C	]11:108205793]C	123.48	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm192-1809,asm192-3951;BEIDH=0,0;BEIDL=2,135;BQ=20.40;BSC=1;BSCQ=20.40;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-23,23;CIRPOS=-10,11;CQ=123.48;EVENT=gridss192_218;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_218o;RAS=1;RASQ=52.81;REF=389;REFPAIR=40;RP=4;RPQ=70.67;SB=1.0;SC=1X45N1X100M20D160M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:20.40:1:20.40:0:0.00:1:0.00:0:0.00:123.48:52.81:389:40:4:70.67:0:0.00:4
11	108234795	gridss192_251o	A	A[11:108234857[	53.21	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=75.83;BSC=3;BSCQ=75.83;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-19,19;CIRPOS=-28,28;CQ=53.21;EVENT=gridss192_251;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_251h;RAS=0;RASQ=0.00;REF=293;REFPAIR=30;RP=3;RPQ=53.21;SB=0.33333334;SC=101M82D105M1X37N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:75.83:3:75.83:0:0.00:2:0.00:0:0.00:53.21:0.00:293:30:3:53.21:0:0.00:3
11	108234857	gridss192_251h	A	]11:108234795]A	53.21	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-19,19;CQ=53.21;EVENT=gridss192_251;IC=0;IMPRECISE;IQ=0.00;PARID=gridss192_251o;RAS=0;RASQ=0.00;REF=284;REFPAIR=31;RP=3;RPQ=53.21;SB=0.0;SC=1X55N1X100M25D145M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:53.21:0.00:284:31:3:53.21:0:0.00:3
11	113668789	gridss193_275b	T	.AAAAAAAATATTTCCATTAAAATTAAAAAATAAAATGTTTTTTTTTTTTTTTTTTTTTT	833.48	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=171.08;BASRP=0;BASSR=8;BEID=asm193-261;BEIDH=-1;BEIDL=58;BQ=833.48;BSC=27;BSCQ=662.39;BUM=0;BUMQ=0.00;BVF=27;CAS=0;CASQ=0.00;CQ=398.90;EVENT=gridss193_275;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=80;REFPAIR=24;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:171.08:0:8:833.48:27:662.39:0:0.00:27:0.00:0:0.00:0.00:0.00:80:24:0:0.00:0:0.00:0
11	125496669	gridss194_13o	A	A[11:125496711[	53	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=19.26;BSC=1;BSCQ=19.26;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-28,28;CIRPOS=-2,2;CQ=53.00;EVENT=gridss194_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_13h;RAS=0;RASQ=0.00;REF=223;REFPAIR=20;RP=3;RPQ=53.00;SB=0.0;SC=128M42D100M1X55N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:19.26:1:19.26:0:0.00:1:0.00:0:0.00:53.00:0.00:223:20:3:53.00:0:0.00:3
11	125496711	gridss194_13h	A	]11:125496669]A	53	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=18.47;BSC=1;BSCQ=18.47;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-28,28;CQ=53.00;EVENT=gridss194_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_13o;RAS=0;RASQ=0.00;REF=313;REFPAIR=28;RP=3;RPQ=53.00;SB=1.0;SC=1X3N1X132M89D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:18.47:1:18.47:0:0.00:1:0.00:0:0.00:53.00:0.00:313:28:3:53.00:0:0.00:3
11	125498096	gridss194_18o	A	A[11:125498144[	70.84	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm194-400;BEIDH=111;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-20,20;CQ=70.84;EVENT=gridss194_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_18h;RAS=1;RASQ=0.00;REF=317;REFPAIR=23;RP=4;RPQ=70.84;SC=101M64D150M1X13N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.84:0.00:317:23:4:70.84:0:0.00:4
11	125498144	gridss194_18h	G	]11:125498096]G	70.84	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=1;BANRPQ=17.85;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm194-400;BEIDH=0;BEIDL=111;BQ=52.33;BSC=2;BSCQ=52.33;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-20,20;CIRPOS=-7,7;CQ=70.84;EVENT=gridss194_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_18o;RAS=0;RASQ=0.00;REF=219;REFPAIR=21;RP=4;RPQ=70.84;SB=0.5;SC=1X39N1X97M47D142M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:1:17.85:0:0.00:0.00:0:0:52.33:2:52.33:0:0.00:2:0.00:0:0.00:70.84:0.00:219:21:4:70.84:0:0.00:4
11	125502443	gridss194_25o	C	C[11:125502526[	53.16	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-35,36;CQ=53.16;EVENT=gridss194_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_25h;RAS=0;RASQ=0.00;REF=267;REFPAIR=11;RP=3;RPQ=53.16;SC=101M94D114M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.16:0.00:267:11:3:53.16:0:0.00:3
11	125502526	gridss194_25h	T	]11:125502443]T	53.16	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=271.76;BSC=13;BSCQ=271.76;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-8,9;CQ=53.16;EVENT=gridss194_25;IC=0;IMPRECISE;IQ=0.00;PARID=gridss194_25o;RAS=0;RASQ=0.00;REF=409;REFPAIR=35;RP=3;RPQ=53.16;SB=0.30769232;SC=1X70N1X259M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:271.76:13:271.76:0:0.00:12:0.00:0:0.00:53.16:0.00:409:35:3:53.16:0:0.00:3
12	6688234	gridss196_74b	A	ACTTGGGGAGGCCAAGGTGGGTGGATCACCTG.	452.66	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=238.49;BASRP=0;BASSR=13;BEID=asm196-19;BEIDH=-1;BEIDL=0;BQ=452.66;BSC=11;BSCQ=214.16;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=452.66;EVENT=gridss196_74;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=23;REFPAIR=20;RP=0;RPQ=0.00;SB=0.041666668;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:238.49:0:13:452.66:11:214.16:0:0.00:14:0.00:0:0.00:0.00:0.00:23:20:0:0.00:0:0.00:0
12	6705137	gridss196_193b	A	AAGAACCAACCCTATCCCCC.	264.28	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=53.59;BASRP=0;BASSR=3;BEID=asm196-130;BEIDH=-1;BEIDL=0;BQ=264.28;BSC=9;BSCQ=210.69;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=155.90;EVENT=gridss196_193;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=103;REFPAIR=13;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:53.59:0:3:264.28:9:210.69:0:0.00:9:0.00:0:0.00:0.00:0.00:103:13:0:0.00:0:0.00:0
12	6705153	gridss196_198b	C	CCCCCCCCAAATCC.	169.30	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=54.49;BASRP=0;BASSR=3;BEID=asm196-133;BEIDH=-1;BEIDL=0;BQ=169.30;BSC=6;BSCQ=114.81;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=90.83;EVENT=gridss196_198;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=175;REFPAIR=16;RP=0;RPQ=0.00;SB=0.8888889;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:54.49:0:3:169.30:6:114.81:0:0.00:6:0.00:0:0.00:0.00:0.00:175:16:0:0.00:0:0.00:0
12	133234742	gridss208_1152b	G	.GTGCGTGTG	254.12	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=103.65;BASRP=0;BASSR=6;BEID=asm208-1176;BEIDH=-1;BEIDL=8;BQ=254.12;BSC=8;BSCQ=150.48;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=207.29;EVENT=gridss208_1152;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=294;REFPAIR=31;RP=0;RPQ=0.00;SB=0.64285713;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:103.65:0:6:254.12:8:150.48:0:0.00:8:0.00:0:0.00:0.00:0.00:294:31:0:0.00:0:0.00:0
12	133234743	gridss208_419b	T	TGTGTATGTG.	310.53	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=137.88;BASRP=0;BASSR=8;BEID=asm208-331;BEIDH=-1;BEIDL=0;BQ=310.53;BSC=10;BSCQ=172.66;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=275.76;EVENT=gridss208_419;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=293;REFPAIR=34;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:137.88:0:8:310.53:10:172.66:0:0.00:10:0.00:0:0.00:0.00:0.00:293:34:0:0.00:0:0.00:0
12	133247872	gridss208_575b	A	AGTTTTTTTGTATAAATTGGAAAACTTGT.	811.23	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=61.68;BASRP=0;BASSR=3;BEID=asm208-507;BEIDH=-1;BEIDL=0;BQ=811.23;BSC=30;BSCQ=749.54;BUM=0;BUMQ=0.00;BVF=30;CAS=0;CASQ=0.00;CQ=308.05;EVENT=gridss208_575;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=122;REFPAIR=19;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:61.68:0:3:811.23:30:749.54:0:0.00:30:0.00:0:0.00:0.00:0.00:122:19:0:0.00:0:0.00:0
13	19154011	gridss210_4b	T	TTTTCTGGAAAAATAGAAGAGCCT.	287.79	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=115.86;BASRP=0;BASSR=6;BEID=asm210-1;BEIDH=-1;BEIDL=0;BQ=287.79;BSC=9;BSCQ=171.93;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=231.71;EVENT=gridss210_4;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=30;REFPAIR=1;RP=0;RPQ=0.00;SB=0.93333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:115.86:0:6:287.79:9:171.93:0:0.00:9:0.00:0:0.00:0.00:0.00:30:1:0:0.00:0:0.00:0
13	23473257	gridss211_16b	C	CCTTCC.	99.72	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=49.86;BASRP=0;BASSR=3;BEID=asm211-9;BEIDH=-1;BEIDL=0;BQ=99.72;BSC=3;BSCQ=49.86;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=99.72;EVENT=gridss211_16;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=168;REFPAIR=12;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:49.86:0:3:99.72:3:49.86:0:0.00:3:0.00:0:0.00:0.00:0.00:168:12:0:0.00:0:0.00:0
13	32909500	gridss212_386b	A	AACAAAAAAAGGGGAAAACTAATAAAAAACAATTAAAT.	541.63	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=36.00;BASRP=0;BASSR=3;BEID=asm212-259;BEIDH=-1;BEIDL=0;BQ=541.63;BSC=19;BSCQ=505.63;BUM=0;BUMQ=0.00;BVF=19;CAS=0;CASQ=0.00;CQ=235.30;EVENT=gridss212_386;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=70;REFPAIR=13;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:36.00:0:3:541.63:19:505.63:0:0.00:19:0.00:0:0.00:0.00:0.00:70:13:0:0.00:0:0.00:0
13	32910722	gridss212_44o	T	T[13:32910765[	140.74	LOW_QUAL	AS=1;ASQ=52.67;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-1449,asm212-333;BEIDH=170,2;BEIDL=0,0;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-32,33;CQ=140.74;EVENT=gridss212_44;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_44h;RAS=1;RASQ=0.00;REF=401;REFPAIR=36;RP=5;RPQ=88.06;SB=0.0;SC=322M1X3N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.67:3:0:0:0.00:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:140.74:0.00:401:36:5:88.06:0:0.00:5
13	32910765	gridss212_44h	G	]13:32910722]G	140.74	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-1449,asm212-333;BEIDH=0,0;BEIDL=170,2;BQ=38.28;BSC=2;BSCQ=38.28;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-32,33;CIRPOS=-2,2;CQ=140.74;EVENT=gridss212_44;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_44o;RAS=1;RASQ=52.67;REF=388;REFPAIR=39;RP=5;RPQ=88.06;SB=0.5;SC=1X64N1X256M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:38.28:2:38.28:0:0.00:2:0.00:0:0.00:140.74:52.67:388:39:5:88.06:0:0.00:5
13	32912099	gridss212_50o	A	A[13:32912155[	53.47	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-22,22;CQ=53.47;EVENT=gridss212_50;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_50h;RAS=0;RASQ=0.00;REF=426;REFPAIR=36;RP=3;RPQ=53.47;SC=292M1X33N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.47:0.00:426:36:3:53.47:0:0.00:3
13	32912155	gridss212_50h	T	]13:32912099]T	53.47	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=53.55;BSC=2;BSCQ=53.55;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-17,17;CQ=53.47;EVENT=gridss212_50;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_50o;RAS=0;RASQ=0.00;REF=440;REFPAIR=37;RP=3;RPQ=53.47;SB=0.5;SC=1X43N1X100M57D125M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:53.55:2:53.55:0:0.00:2:0.00:0:0.00:53.47:0.00:440:37:3:53.47:0:0.00:3
13	32914264	gridss212_56o	T	T[13:32914329[	70.61	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-1575;BEIDH=150;BEIDL=0;BQ=99.28;BSC=5;BSCQ=99.28;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-6,6;CQ=70.61;EVENT=gridss212_56;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_56h;RAS=1;RASQ=0.00;REF=374;REFPAIR=36;RP=4;RPQ=70.61;SB=0.4;SC=101M57D155M1X67N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:99.28:5:99.28:0:0.00:5:0.00:0:0.00:70.61:0.00:374:36:4:70.61:0:0.00:4
13	32914329	gridss212_56h	C	]13:32914264]C	70.61	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm212-1575;BEIDH=0;BEIDL=150;BQ=27.17;BSC=1;BSCQ=27.17;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,6;CIRPOS=-34,34;CQ=70.61;EVENT=gridss212_56;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_56o;RAS=0;RASQ=0.00;REF=377;REFPAIR=37;RP=4;RPQ=70.61;SB=0.0;SC=1X11N1X30M44D112M27D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:27.17:1:27.17:0:0.00:0:0.00:0:0.00:70.61:0.00:377:37:4:70.61:0:0.00:4
13	32943343	gridss212_776b	A	AGTCTCAAAA.	198.04	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=84.79;BASRP=0;BASSR=5;BEID=asm212-714;BEIDH=-1;BEIDL=0;BQ=198.04;BSC=6;BSCQ=113.25;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=169.58;EVENT=gridss212_776;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=236;REFPAIR=23;RP=0;RPQ=0.00;SB=0.27272728;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:84.79:0:5:198.04:6:113.25:0:0.00:6:0.00:0:0.00:0.00:0.00:236:23:0:0.00:0:0.00:0
13	32944864	gridss212_88o	C	C[13:32944906[	53.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-21,21;CQ=53.32;EVENT=gridss212_88;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_88h;RAS=0;RASQ=0.00;REF=0;REFPAIR=0;RP=3;RPQ=53.32;SC=101M45D167M1X12N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.32:0.00:0:0:3:53.32:0:0.00:3
13	32944906	gridss212_88h	T	]13:32944864]T	53.32	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-6,7;CQ=53.32;EVENT=gridss212_88;IC=0;IMPRECISE;IQ=0.00;PARID=gridss212_88o;RAS=0;RASQ=0.00;REF=0;REFPAIR=0;RP=3;RPQ=53.32;SC=1X41N1X100M74D110M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.32:0.00:0:0:3:53.32:0:0.00:3
13	49019127	gridss213_504b	T	.TAGTAGT	193.50	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=50.24;BASRP=0;BASSR=3;BEID=asm213-493;BEIDH=-1;BEIDL=6;BQ=193.50;BSC=7;BSCQ=143.26;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=131.56;EVENT=gridss213_504;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=214;REFPAIR=19;RP=0;RPQ=0.00;SB=0.6363636;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:50.24:0:3:193.50:7:143.26:0:0.00:7:0.00:0:0.00:0.00:0.00:214:19:0:0.00:0:0.00:0
13	49019135	gridss213_208b	T	TAATTT.	194.16	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=66.48;BASRP=0;BASSR=4;BEID=asm213-185;BEIDH=-1;BEIDL=0;BQ=194.16;BSC=7;BSCQ=127.68;BUM=0;BUMQ=0.00;BVF=7;CAS=0;CASQ=0.00;CQ=132.96;EVENT=gridss213_208;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=225;REFPAIR=21;RP=0;RPQ=0.00;SB=0.36363637;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:66.48:0:4:194.16:7:127.68:0:0.00:7:0.00:0:0.00:0.00:0.00:225:21:0:0.00:0:0.00:0
13	49034098	gridss213_246b	T	TTCTTTCTTTCT.	161.49	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=53.55;BASRP=0;BASSR=3;BEID=asm213-211;BEIDH=-1;BEIDL=0;BQ=161.49;BSC=6;BSCQ=107.95;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=107.09;EVENT=gridss213_246;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=17;REFPAIR=9;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:53.55:0:3:161.49:6:107.95:0:0.00:6:0.00:0:0.00:0.00:0.00:17:9:0:0.00:0:0.00:0
13	49054381	gridss213_18o	A	A[13:49054464[	159.17	LOW_QUAL	AS=1;ASQ=70.60;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm213-317,asm213-602;BEIDH=2,276;BEIDL=0,0;BQ=90.34;BSC=4;BSCQ=90.34;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-55,56;CIRPOS=-14,14;CQ=159.17;EVENT=gridss213_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss213_18h;RAS=1;RASQ=0.00;REF=344;REFPAIR=34;RP=5;RPQ=88.57;SB=0.25;SC=275M1X110N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:70.60:4:0:0:0.00:0:0.00:0.00:0:0:90.34:4:90.34:0:0.00:4:0.00:0:0.00:159.17:0.00:344:34:5:88.57:0:0.00:5
13	49054464	gridss213_18h	T	]13:49054381]T	159.17	LOW_QUAL	AS=1;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm213-317,asm213-602;BEIDH=0,0;BEIDL=2,276;BQ=41.47;BSC=2;BSCQ=41.47;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-55,56;CQ=159.17;EVENT=gridss213_18;IC=0;IMPRECISE;IQ=0.00;PARID=gridss213_18o;RAS=1;RASQ=70.60;REF=350;REFPAIR=39;RP=5;RPQ=88.57;SB=0.5;SC=1X27N1X298M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:41.47:2:41.47:0:0.00:2:0.00:0:0.00:159.17:70.60:350:39:5:88.57:0:0.00:5
13	49054795	gridss213_19o	A	A[13:49054878[	105.87	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=52.93;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm213-318;BEIDH=2;BEIDL=0;BQ=48.07;BSC=2;BSCQ=48.07;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-38,39;CIRPOS=-38,39;CQ=105.87;EVENT=gridss213_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss213_19h;RAS=0;RASQ=0.00;REF=149;REFPAIR=21;RP=3;RPQ=52.93;SB=0.5;SC=101M16D132M1X76N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.93:3:0:0:0.00:0:0.00:0.00:0:0:48.07:2:48.07:0:0.00:2:0.00:0:0.00:105.87:0.00:149:21:3:52.93:0:0.00:3
13	49054878	gridss213_19h	C	]13:49054795]C	105.87	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm213-318;BEIDH=0;BEIDL=2;BQ=19.80;BSC=1;BSCQ=19.80;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-38,39;CIRPOS=-38,39;CQ=105.87;EVENT=gridss213_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss213_19o;RAS=1;RASQ=52.93;REF=216;REFPAIR=20;RP=3;RPQ=52.93;SB=0.0;SC=1X76N1X193M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:19.80:1:19.80:0:0.00:1:0.00:0:0.00:105.87:52.93:216:20:3:52.93:0:0.00:3
13	91111617	gridss217_33b	C	.AACACTC	118.26	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=50.63;BASRP=0;BASSR=3;BEID=asm217-32;BEIDH=-1;BEIDL=6;BQ=118.26;BSC=4;BSCQ=67.63;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=101.25;EVENT=gridss217_33;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=106;REFPAIR=4;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:50.63:0:3:118.26:4:67.63:0:0.00:4:0.00:0:0.00:0.00:0.00:106:4:0:0.00:0:0.00:0
13	103514582	gridss219_12o	G	G[13:103514638[	53.06	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-30,31;CQ=53.06;EVENT=gridss219_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss219_12h;RAS=0;RASQ=0.00;REF=265;REFPAIR=24;RP=3;RPQ=53.06;SC=101M86D113M1X25N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.06:0.00:265:24:3:53.06:0:0.00:3
13	103514638	gridss219_12h	A	]13:103514582]A	53.06	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=28.46;BSC=1;BSCQ=28.46;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-30,31;CIRPOS=-13,13;CQ=53.06;EVENT=gridss219_12;IC=0;IMPRECISE;IQ=0.00;PARID=gridss219_12o;RAS=0;RASQ=0.00;REF=273;REFPAIR=20;RP=3;RPQ=53.06;SB=0.0;SC=1X60N1X100M19D149M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:28.46:1:28.46:0:0.00:1:0.00:0:0.00:53.06:0.00:273:20:3:53.06:0:0.00:3
13	108861772	gridss219_30o	A	A[13:108861824[	70.97	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=71.10;BSC=4;BSCQ=71.10;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-7,7;CQ=70.97;EVENT=gridss219_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss219_30h;RAS=0;RASQ=0.00;REF=346;REFPAIR=28;RP=4;RPQ=70.97;SB=0.75;SC=118M44D100M1X63N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:71.10:4:71.10:0:0.00:3:0.00:0:0.00:70.97:0.00:346:28:4:70.97:0:0.00:4
13	108861824	gridss219_30h	T	]13:108861772]T	70.97	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=2;BANRPQ=35.55;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=43.78;BSC=2;BSCQ=43.78;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=-32,32;CQ=70.97;EVENT=gridss219_30;IC=0;IMPRECISE;IQ=0.00;PARID=gridss219_30o;RAS=0;RASQ=0.00;REF=438;REFPAIR=25;RP=4;RPQ=70.97;SB=0.5;SC=1X13N1X312M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:2:35.55:0:0.00:0.00:0:0:43.78:2:43.78:0:0.00:2:0.00:0:0.00:70.97:0.00:438:25:4:70.97:0:0.00:4
13	108863461	gridss219_39o	A	A[13:108863497[	122.97	LOW_QUAL	AS=1;ASQ=52.59;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm219-342,asm219-711;BEIDH=2,144;BEIDL=0,0;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-21,21;CQ=122.97;EVENT=gridss219_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss219_39h;RAS=1;RASQ=0.00;REF=369;REFPAIR=28;RP=4;RPQ=70.38;SB=0.0;SC=71M67D143M1X14N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.59:3:0:0:0.00:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:122.97:0.00:369:28:4:70.38:0:0.00:4
13	108863497	gridss219_39h	C	]13:108863461]C	122.97	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm219-342,asm219-711;BEIDH=0,0;BEIDL=2,144;BQ=27.17;BSC=1;BSCQ=27.17;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-7,8;CQ=122.97;EVENT=gridss219_39;IC=0;IMPRECISE;IQ=0.00;PARID=gridss219_39o;RAS=1;RASQ=52.59;REF=311;REFPAIR=25;RP=4;RPQ=70.38;SB=0.0;SC=1X41N1X100M40D138M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:27.17:1:27.17:0:0.00:1:0.00:0:0.00:122.97:52.59:311:25:4:70.38:0:0.00:4
14	68375225	gridss227_491b	T	.AAAAAAAGAAAAATTTTTGTTTTTTAAGGTTTCTTTGGATTAATTTGGTTTATTGGAGGTGGAATTTTTTTT	641.88	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=146.35;BASRP=0;BASSR=6;BEID=asm227-506;BEIDH=-1;BEIDL=71;BQ=641.88;BSC=23;BSCQ=495.54;BUM=0;BUMQ=0.00;BVF=23;CAS=0;CASQ=0.00;CQ=458.53;EVENT=gridss227_491;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=367;REFPAIR=49;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:146.35:0:6:641.88:23:495.54:0:0.00:23:0.00:0:0.00:0.00:0.00:367:49:0:0.00:0:0.00:0
14	69149628	gridss227_700b	T	.TTTAATAAAATCCTTTTTCTTTTTTTT	165.18	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=69.47;BASRP=0;BASSR=4;BEID=asm227-770;BEIDH=-1;BEIDL=26;BQ=165.18;BSC=5;BSCQ=95.71;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=148.04;EVENT=gridss227_700;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=85;REFPAIR=13;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:69.47:0:4:165.18:5:95.71:0:0.00:6:0.00:0:0.00:0.00:0.00:85:13:0:0.00:0:0.00:0
14	69149634	gridss227_28o	T	TTTTTTTTTTTTTTGTATAGGGCAGTAAACAAGAGCTCT[14:69149673[	395.37	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=395.37;ASRP=0;ASSR=10;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm227-357;BEIDH=0;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=395.37;EVENT=gridss227_28;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss227_28h;RAS=0;RASQ=0.00;REF=105;REFPAIR=12;RP=0;RPQ=0.00;SB=0.6875;SC=68M1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=9	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:395.37:0:10:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:395.37:0.00:105:12:0:0.00:0:0.00:9
14	69149673	gridss227_28h	G	]14:69149634]TTTTTTTTTTTTTGTATAGGGCAGTAAACAAGAGCTCTG	395.37	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=10;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm227-357;BEIDH=0;BEIDL=0;BQ=18.47;BSC=1;BSCQ=18.47;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CQ=395.37;EVENT=gridss227_28;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss227_28o;RAS=1;RASQ=395.37;REF=161;REFPAIR=30;RP=0;RPQ=0.00;SB=0.7058824;SC=1X71M;SR=0;SRQ=0.00;SVTYPE=BND;VF=9	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:10:0:0.00:0:0.00:0.00:0:0:18.47:1:18.47:0:0.00:1:0.00:0:0.00:395.37:395.37:161:30:0:0.00:0:0.00:9
14	80297414	gridss228_46b	T	.GACAGTCCTATT	187.45	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=170.45;BASRP=0;BASSR=5;BEID=asm228-49;BEIDH=-1;BEIDL=11;BQ=187.45;BSC=1;BSCQ=17.00;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=187.45;EVENT=gridss228_46;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=15;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:170.45:0:5:187.45:1:17.00:0:0.00:5:0.00:0:0.00:0.00:0.00:15:0:0:0.00:0:0.00:0
15	41024133	gridss235_11o	T	T[15:41024180[	53.28	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,1;CIRPOS=-7,7;CQ=53.28;EVENT=gridss235_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss235_11h;RAS=0;RASQ=0.00;REF=115;REFPAIR=12;RP=3;RPQ=53.28;SC=183M46D96M2X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.28:0.00:115:12:3:53.28:0:0.00:3
15	41024180	gridss235_11h	C	]15:41024133]C	53.28	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-7,7;CIRPOS=0,1;CQ=53.28;EVENT=gridss235_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss235_11o;RAS=0;RASQ=0.00;REF=119;REFPAIR=6;RP=3;RPQ=53.28;SC=1X13N1X165M50D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.28:0.00:119:6:3:53.28:0:0.00:3
15	89811895	gridss240_229b	T	TTTTTAAAGAGGAGAATAAATATTATTTGCCCACT.	153.13	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=55.16;BASRP=0;BASSR=3;BEID=asm240-73;BEIDH=-1;BEIDL=0;BQ=153.13;BSC=5;BSCQ=97.97;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=112.17;EVENT=gridss240_229;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=199;REFPAIR=20;RP=0;RPQ=0.00;SB=0.625;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:55.16:0:3:153.13:5:97.97:0:0.00:5:0.00:0:0.00:0.00:0.00:199:20:0:0.00:0:0.00:0
15	89816564	gridss240_235b	A	AAAAAAATTTAAATAAAATAATTCCTTATAGTTTTTCTTTTTTAAGAATAACAAGAAGGAGT.	470.99	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=116.12;BASRP=0;BASSR=5;BEID=asm240-85;BEIDH=-1;BEIDL=0;BQ=470.99;BSC=14;BSCQ=354.87;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=283.55;EVENT=gridss240_235;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=94;REFPAIR=18;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:116.12:0:5:470.99:14:354.87:0:0.00:14:0.00:0:0.00:0.00:0.00:94:18:0:0.00:0:0.00:0
15	89825176	gridss240_21o	C	C[15:89825239[	141.13	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=70.57;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-169;BEIDH=2;BEIDL=0;BQ=22.61;BSC=1;BSCQ=22.61;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=141.13;EVENT=gridss240_21;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_21h;RAS=0;RASQ=0.00;REF=505;REFPAIR=47;RP=4;RPQ=70.57;SB=0.0;SC=191M21D97M1X16N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:70.57:4:0:0:0.00:0:0.00:0.00:0:0:22.61:1:22.61:0:0.00:1:0.00:0:0.00:141.13:0.00:505:47:4:70.57:0:0.00:4
15	89825239	gridss240_21h	A	]15:89825176]A	141.13	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-169;BEIDH=0;BEIDL=2;BQ=37.92;BSC=2;BSCQ=37.92;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-8,9;CIRPOS=-8,9;CQ=141.13;EVENT=gridss240_21;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_21o;RAS=1;RASQ=70.57;REF=460;REFPAIR=46;RP=4;RPQ=70.57;SB=0.5;SC=1X16N1X258M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:37.92:2:37.92:0:0.00:2:0.00:0:0.00:141.13:70.57:460:46:4:70.57:0:0.00:4
15	91313421	gridss240_917b	T	TTGTTTTGTTTTTCTTTTGTT.	341.60	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=92.42;BASRP=0;BASSR=5;BEID=asm240-821;BEIDH=-1;BEIDL=0;BQ=341.60;BSC=13;BSCQ=249.18;BUM=0;BUMQ=0.00;BVF=13;CAS=0;CASQ=0.00;CQ=262.75;EVENT=gridss240_917;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=95;REFPAIR=17;RP=0;RPQ=0.00;SB=0.9444444;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:92.42:0:5:341.60:13:249.18:0:0.00:13:0.00:0:0.00:0.00:0.00:95:17:0:0.00:0:0.00:0
15	91314338	gridss240_940b	C	CACTTG.	99.72	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=49.86;BASRP=0;BASSR=3;BEID=asm240-822;BEIDH=-1;BEIDL=0;BQ=99.72;BSC=3;BSCQ=49.86;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=99.72;EVENT=gridss240_940;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=348;REFPAIR=22;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:49.86:0:3:99.72:3:49.86:0:0.00:3:0.00:0:0.00:0.00:0.00:348:22:0:0.00:0:0.00:0
15	91326246	gridss240_87o	T	T[15:91326343[	123.64	LOW_QUAL	AS=1;ASQ=52.84;ASRP=3;ASSR=0;BA=0;BANRP=1;BANRPQ=17.96;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-1011,asm240-2418;BEIDH=2,123;BEIDL=0,0;BQ=25.12;BSC=1;BSCQ=25.12;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-52,53;CIRPOS=-34,34;CQ=123.64;EVENT=gridss240_87;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_87h;RAS=1;RASQ=0.00;REF=277;REFPAIR=27;RP=4;RPQ=70.80;SB=0.0;SC=98M1D122M1X104N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.84:3:0:1:17.96:0:0.00:0.00:0:0:25.12:1:25.12:0:0.00:1:0.00:0:0.00:123.64:0.00:277:27:4:70.80:0:0.00:4
15	91326343	gridss240_87h	T	]15:91326246]T	123.64	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-1011,asm240-2418;BEIDH=0,0;BEIDL=2,123;BQ=61.45;BSC=3;BSCQ=61.45;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-34,34;CIRPOS=-52,53;CQ=123.64;EVENT=gridss240_87;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_87o;RAS=1;RASQ=52.84;REF=277;REFPAIR=26;RP=4;RPQ=70.80;SB=0.6666667;SC=1X67N1X258M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:61.45:3:61.45:0:0.00:3:0.00:0:0.00:123.64:52.84:277:26:4:70.80:0:0.00:4
15	91326380	gridss240_89o	C	C[15:91326496[	87.51	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=52.74;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-1010;BEIDH=2;BEIDL=0;BQ=18.47;BSC=1;BSCQ=18.47;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-39,39;CQ=105.48;EVENT=gridss240_89;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_89h;RAS=0;RASQ=0.00;REF=286;REFPAIR=37;RP=2;RPQ=34.77;SB=0.0;SC=103M1X77N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:52.74:3:0:0:0.00:0:0.00:0.00:0:0:18.47:1:18.47:0:0.00:1:0.00:0:0.00:87.51:0.00:286:37:2:34.77:0:0.00:3
15	91326496	gridss240_89h	C	]15:91326380]C	87.51	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm240-1010;BEIDH=0;BEIDL=2;BQ=82.05;BSC=4;BSCQ=82.05;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-39,39;CIRPOS=-39,39;CQ=105.48;EVENT=gridss240_89;IC=0;IMPRECISE;IQ=0.00;PARID=gridss240_89o;RAS=1;RASQ=52.74;REF=374;REFPAIR=28;RP=2;RPQ=34.77;SB=0.5;SC=1X77N1X135M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:82.05:4:82.05:0:0.00:4:0.00:0:0.00:87.51:52.74:374:28:2:34.77:0:0.00:3
15	91332279	gridss240_2324b	A	.CAATGGAGAGA	191.20	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=86.93;BASRP=0;BASSR=5;BEID=asm240-2433;BEIDH=-1;BEIDL=10;BQ=191.20;BSC=6;BSCQ=104.27;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=191.20;EVENT=gridss240_2324;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=37;REFPAIR=0;RP=0;RPQ=0.00;SB=0.8181818;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:86.93:0:5:191.20:6:104.27:0:0.00:6:0.00:0:0.00:0.00:0.00:37:0:0:0.00:0:0.00:0
15	91333235	gridss240_2360b	T	.GAACTTTCACCTTGTTTTCAATAATTAATTTGTAAGGTCTAACACCCCCCGTCCCTGGTGT	381.79	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=108.00;BASRP=0;BASSR=9;BEID=asm240-2432;BEIDH=-1;BEIDL=60;BQ=381.79;BSC=12;BSCQ=273.79;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=402.83;EVENT=gridss240_2360;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=82;REFPAIR=31;RP=0;RPQ=0.00;SB=0.16666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:108.00:0:9:381.79:12:273.79:0:0.00:12:0.00:0:0.00:0.00:0.00:82:31:0:0.00:0:0.00:0
15	91340660	gridss240_2419b	A	.AAACTCCATCTCA	105.87	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=52.93;BASRP=0;BASSR=3;BEID=asm240-2560;BEIDH=-1;BEIDL=12;BQ=105.87;BSC=3;BSCQ=52.93;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=105.87;EVENT=gridss240_2419;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=5;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:52.93:0:3:105.87:3:52.93:0:0.00:3:0.00:0:0.00:0.00:0.00:5:0:0:0.00:0:0.00:0
15	91358272	gridss240_2658b	G	.GGTCTGATTGGGATGAGAAAGAGTTAGATAAAGGGAGCCCAATGACGTCTTATTGGAGCCCTGAGCAGCTTTAGAGGAAG	757.45	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=378.73;BASRP=0;BASSR=21;BEID=asm240-2791;BEIDH=-1;BEIDL=79;BQ=757.45;BSC=21;BSCQ=378.73;BUM=0;BUMQ=0.00;BVF=21;CAS=0;CASQ=0.00;CQ=757.45;EVENT=gridss240_2658;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=440;REFPAIR=28;RP=0;RPQ=0.00;SB=0.5714286;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:378.73:0:21:757.45:21:378.73:0:0.00:21:0.00:0:0.00:0.00:0.00:440:28:0:0.00:0:0.00:0
15	91358275	gridss240_1439b	G	GAAGGTCA.	470.12	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=204.26;BASRP=0;BASSR=12;BEID=asm240-1363;BEIDH=-1;BEIDL=0;BQ=470.12;BSC=15;BSCQ=265.86;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=391.38;EVENT=gridss240_1439;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=447;REFPAIR=32;RP=0;RPQ=0.00;SB=0.25925925;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:204.26:0:12:470.12:15:265.86:0:0.00:15:0.00:0:0.00:0.00:0.00:447:32:0:0.00:0:0.00:0
16	14021435	gridss242_66b	A	AAAATTATTTTTATTTTTTTTCAATTTTATAAATAAAATCTTTTGTTAAGTG.	434.49	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=150.43;BASRP=0;BASSR=6;BEID=asm242-21;BEIDH=-1;BEIDL=0;BQ=434.49;BSC=12;BSCQ=284.06;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=300.86;EVENT=gridss242_66;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=34;REFPAIR=9;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:150.43:0:6:434.49:12:284.06:0:0.00:12:0.00:0:0.00:0.00:0.00:34:9:0:0.00:0:0.00:0
16	14026271	gridss242_9o	T	T[16:14026328[	126.96	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.20;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm242-102;BEIDH=2;BEIDL=0;BQ=17.54;BSC=1;BSCQ=17.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,0;CIRPOS=0,8;CQ=126.96;EVENT=gridss242_9;HOMLEN=8;HOMSEQ=ATGTATGT;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss242_9h;RAS=0;RASQ=0.00;REF=495;REFPAIR=57;RP=3;RPQ=53.20;SB=0.5;SC=216M1X7N1X;SR=1;SRQ=20.57;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.20:3:0:0:0.00:0:0.00:0.00:0:0:17.54:1:17.54:0:0.00:1:0.00:0:0.00:126.96:0.00:495:57:3:53.20:1:20.57:4
16	14026328	gridss242_9h	A	]16:14026271]A	126.96	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm242-102;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=0,8;CIRPOS=-8,0;CQ=126.96;EVENT=gridss242_9;HOMLEN=8;HOMSEQ=ATGTATGT;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss242_9o;RAS=1;RASQ=53.20;REF=411;REFPAIR=49;RP=3;RPQ=53.20;SB=0.0;SC=1X7N1X66M67D112M;SR=1;SRQ=20.57;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:126.96:53.20:411:49:3:53.20:1:20.57:4
16	14029354	gridss242_11o	C	C[16:14029460[	106.20	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.10;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm242-103;BEIDH=2;BEIDL=0;BQ=97.78;BSC=5;BSCQ=97.78;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-35,35;CQ=106.20;EVENT=gridss242_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_11h;RAS=0;RASQ=0.00;REF=474;REFPAIR=27;RP=3;RPQ=53.10;SB=0.8;SC=101M22D133M1X69N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.10:3:0:0:0.00:0:0.00:0.00:0:0:97.78:5:97.78:0:0.00:4:0.00:0:0.00:106.20:0.00:474:27:3:53.10:0:0.00:3
16	14029460	gridss242_11h	T	]16:14029354]T	106.20	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm242-103;BEIDH=0;BEIDL=2;BQ=83.58;BSC=4;BSCQ=83.58;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-35,35;CIRPOS=-35,35;CQ=106.20;EVENT=gridss242_11;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_11o;RAS=1;RASQ=53.10;REF=400;REFPAIR=27;RP=3;RPQ=53.10;SB=1.0;SC=1X69N1X175M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:83.58:4:83.58:0:0.00:4:0.00:0:0.00:106.20:53.10:400:27:3:53.10:0:0.00:3
16	14044779	gridss242_242b	C	CATGGCTC.	269.55	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=134.78;BASRP=0;BASSR=8;BEID=asm242-126;BEIDH=-1;BEIDL=0;BQ=269.55;BSC=8;BSCQ=134.78;BUM=0;BUMQ=0.00;BVF=8;CAS=0;CASQ=0.00;CQ=235.79;EVENT=gridss242_242;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=303;REFPAIR=28;RP=0;RPQ=0.00;SB=0.625;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:134.78:0:8:269.55:8:134.78:0:0.00:8:0.00:0:0.00:0.00:0.00:303:28:0:0.00:0:0.00:0
16	14045616	gridss242_29o	G	G[16:14045694[	53.39	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-51,51;CIRPOS=-24,25;CQ=53.39;EVENT=gridss242_29;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_29h;RAS=0;RASQ=0.00;REF=397;REFPAIR=38;RP=3;RPQ=53.39;SC=224M1X101N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.39:0.00:397:38:3:53.39:0:0.00:3
16	14045694	gridss242_29h	C	]16:14045616]C	53.39	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-24,25;CIRPOS=-51,51;CQ=53.39;EVENT=gridss242_29;IC=0;IMPRECISE;IQ=0.00;PARID=gridss242_29o;RAS=0;RASQ=0.00;REF=430;REFPAIR=56;RP=3;RPQ=53.39;SC=1X48N1X107M69D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.39:0.00:430:56:3:53.39:0:0.00:3
16	23630021	gridss243_23o	A	A[16:23630085[	212.83	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=106.42;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm243-201;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-18,18;CQ=212.83;EVENT=gridss243_23;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_23h;RAS=0;RASQ=0.00;REF=0;REFPAIR=3;RP=6;RPQ=106.42;SC=290M1X35N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.42:6:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:212.83:0.00:0:3:6:106.42:0:0.00:6
16	23630085	gridss243_23h	G	]16:23630021]G	212.83	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm243-201;BEIDH=0;BEIDL=2;BQ=80.90;BSC=3;BSCQ=80.90;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-18,18;CQ=212.83;EVENT=gridss243_23;IC=0;IMPRECISE;IQ=0.00;PARID=gridss243_23o;RAS=1;RASQ=106.42;REF=43;REFPAIR=1;RP=6;RPQ=106.42;SB=0.6666667;SC=1X35N1X269M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:80.90:3:80.90:0:0.00:3:0.00:0:0.00:212.83:106.42:43:1:6:106.42:0:0.00:6
16	89806348	gridss250_314b	T	.AAAGTT	160.34	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=49.86;BASRP=0;BASSR=3;BEID=asm250-296;BEIDH=-1;BEIDL=5;BQ=160.34;BSC=6;BSCQ=110.48;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=124.31;EVENT=gridss250_314;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=331;REFPAIR=23;RP=0;RPQ=0.00;SB=0.5555556;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:49.86:0:3:160.34:6:110.48:0:0.00:6:0.00:0:0.00:0.00:0.00:331:23:0:0.00:0:0.00:0
16	89828978	gridss250_354b	A	.AAGAGTGAAAAATATTTAAAAAAAAGAAAAAA	129.51	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=55.75;BASRP=0;BASSR=3;BEID=asm250-360;BEIDH=-1;BEIDL=31;BQ=129.51;BSC=4;BSCQ=73.77;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=111.49;EVENT=gridss250_354;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=28;REFPAIR=0;RP=0;RPQ=0.00;SB=0.71428573;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:55.75:0:3:129.51:4:73.77:0:0.00:4:0.00:0:0.00:0.00:0.00:28:0:0:0.00:0:0.00:0
16	89857436	gridss250_418b	T	.TTTTTTGTTTTTAGGGAAATTTTTGT	237.63	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=20.40;BASRP=0;BASSR=1;BEID=asm250-437;BEIDH=-1;BEIDL=25;BQ=237.63;BSC=11;BSCQ=217.23;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=77.65;EVENT=gridss250_418;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=45;REFPAIR=2;RP=0;RPQ=0.00;SB=0.14285715;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:20.40:0:1:237.63:11:217.23:0:0.00:11:0.00:0:0.00:0.00:0.00:45:2:0:0.00:0:0.00:0
17	7578726	gridss251_144b	T	TGAGATATGGTCG.	104.61	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=52.30;BASRP=0;BASSR=3;BEID=asm251-128;BEIDH=-1;BEIDL=0;BQ=104.61;BSC=3;BSCQ=52.30;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=121.61;EVENT=gridss251_144;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=56;REFPAIR=20;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:52.30:0:3:104.61:3:52.30:0:0.00:3:0.00:0:0.00:0.00:0.00:56:20:0:0.00:0:0.00:0
17	12097249	gridss251_306b	T	TCTTGATT.	152.97	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=67.91;BASRP=0;BASSR=4;BEID=asm251-304;BEIDH=-1;BEIDL=0;BQ=152.97;BSC=5;BSCQ=85.06;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=135.82;EVENT=gridss251_306;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=79;REFPAIR=12;RP=0;RPQ=0.00;SB=0.22222222;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:67.91:0:4:152.97:5:85.06:0:0.00:5:0.00:0:0.00:0.00:0.00:79:12:0:0.00:0:0.00:0
17	37618936	gridss254_13o	G	G[17:37618972[	53.31	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=47.89;BSC=2;BSCQ=47.89;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-9,10;CIRPOS=-17,17;CQ=53.31;EVENT=gridss254_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_13h;RAS=0;RASQ=0.00;REF=190;REFPAIR=19;RP=3;RPQ=53.31;SB=1.0;SC=111M96D100M1X18N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:47.89:2:47.89:0:0.00:2:0.00:0:0.00:53.31:0.00:190:19:3:53.31:0:0.00:3
17	37618972	gridss254_13h	A	]17:37618936]A	53.31	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=34.38;BSC=2;BSCQ=34.38;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-17,17;CIRPOS=-9,10;CQ=53.31;EVENT=gridss254_13;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_13o;RAS=0;RASQ=0.00;REF=212;REFPAIR=14;RP=3;RPQ=53.31;SB=1.0;SC=1X33N1X155M36D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:34.38:2:34.38:0:0.00:2:0.00:0:0.00:53.31:0.00:212:14:3:53.31:0:0.00:3
17	37689328	gridss254_1930b	A	.AAAAAAAAATTTTCTTTTAAAGGAAAGGTTCAATAACTAAA	172.34	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=66.90;BASRP=0;BASSR=3;BEID=asm254-1889;BEIDH=-1;BEIDL=40;BQ=172.34;BSC=5;BSCQ=105.44;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=172.34;EVENT=gridss254_1930;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=198;REFPAIR=28;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:66.90:0:3:172.34:5:105.44:0:0.00:5:0.00:0:0.00:0.00:0.00:198:28:0:0.00:0:0.00:0
17	41218849	gridss254_876b	T	TGAGATAGAGT.	343.26	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=54.33;BASRP=0;BASSR=3;BEID=asm254-785;BEIDH=-1;BEIDL=0;BQ=343.26;BSC=15;BSCQ=288.92;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=128.47;EVENT=gridss254_876;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=77;REFPAIR=19;RP=0;RPQ=0.00;SB=0.8333333;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:54.33:0:3:343.26:15:288.92:0:0.00:15:0.00:0:0.00:0.00:0.00:77:19:0:0.00:0:0.00:0
17	41226743	gridss254_980b	G	GTCTGAGGC.	103.36	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=51.68;BASRP=0;BASSR=3;BEID=asm254-914;BEIDH=-1;BEIDL=0;BQ=103.36;BSC=3;BSCQ=51.68;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=103.36;EVENT=gridss254_980;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=119;REFPAIR=18;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:51.68:0:3:103.36:3:51.68:0:0.00:3:0.00:0:0.00:0.00:0.00:119:18:0:0.00:0:0.00:0
17	41227080	gridss254_2500b	G	.AGGACG	106.78	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=35.65;BASRP=0;BASSR=2;BEID=asm254-2640;BEIDH=-1;BEIDL=5;BQ=106.78;BSC=4;BSCQ=71.13;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=52.66;EVENT=gridss254_2500;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=71;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:35.65:0:2:106.78:4:71.13:0:0.00:4:0.00:0:0.00:0.00:0.00:71:0:0:0.00:0:0.00:0
17	41234218	gridss254_92o	A	A[17:41234270[	141.63	LOW_QUAL	AS=1;ASQ=53.19;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1046,asm254-2775;BEIDH=2,115;BEIDL=0,0;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-1,1;CIRPOS=-14,14;CQ=141.63;EVENT=gridss254_92;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_92h;RAS=1;RASQ=0.00;REF=389;REFPAIR=39;RP=5;RPQ=88.44;SB=1.0;SC=165M59D100M1X1N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.19:3:0:0:0.00:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:0:0.00:0:0.00:141.63:0.00:389:39:5:88.44:0:0.00:5
17	41234270	gridss254_92h	T	]17:41234218]T	141.63	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1046,asm254-2775;BEIDH=0,0;BEIDL=2,115;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-14,14;CIRPOS=-1,1;CQ=141.63;EVENT=gridss254_92;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_92o;RAS=1;RASQ=53.19;REF=374;REFPAIR=25;RP=5;RPQ=88.44;SC=1X27N1X123M45D135M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:141.63:53.19:374:25:5:88.44:0:0.00:5
17	41236874	gridss254_95o	T	T[17:41236914[	141.51	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.13;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1128;BEIDH=2;BEIDL=0;BQ=46.77;BSC=2;BSCQ=46.77;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-7,8;CIRPOS=-9,9;CQ=124.00;EVENT=gridss254_95;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_95h;RAS=0;RASQ=0.00;REF=452;REFPAIR=41;RP=5;RPQ=88.38;SB=0.0;SC=165M46D100M1X14N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.13:3:0:0:0.00:0:0.00:0.00:0:0:46.77:2:46.77:0:0.00:2:0.00:0:0.00:141.51:0.00:452:41:5:88.38:0:0.00:5
17	41236914	gridss254_95h	A	]17:41236874]A	141.51	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm254-1128;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-7,8;CQ=124.00;EVENT=gridss254_95;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_95o;RAS=1;RASQ=53.13;REF=398;REFPAIR=33;RP=5;RPQ=88.38;SC=1X17N1X170M34D104M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:141.51:53.13:398:33:5:88.38:0:0.00:5
17	41243971	gridss254_108o	A	A[17:41244016[	71.35	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=17.34;BSC=1;BSCQ=17.34;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-5,5;CQ=71.35;EVENT=gridss254_108;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_108h;RAS=0;RASQ=0.00;REF=343;REFPAIR=22;RP=4;RPQ=71.35;SB=0.0;SC=156M29D100M1X40N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:17.34:1:17.34:0:0.00:1:0.00:0:0.00:71.35:0.00:343:22:4:71.35:0:0.00:4
17	41244016	gridss254_108h	T	]17:41243971]T	71.35	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=3;BANRPQ=53.50;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=17.76;BSC=1;BSCQ=17.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-5,5;CIRPOS=-20,21;CQ=71.35;EVENT=gridss254_108;IC=0;IMPRECISE;IQ=0.00;PARID=gridss254_108o;RAS=0;RASQ=0.00;REF=319;REFPAIR=26;RP=4;RPQ=71.35;SB=1.0;SC=1X9N1X41M1D206M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:3:53.50:0:0.00:0.00:0:0:17.76:1:17.76:0:0.00:1:0.00:0:0.00:71.35:0.00:319:26:4:71.35:0:0.00:4
17	41247123	gridss254_2832b	C	.ATGCAGACCCCACACCTC	409.81	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=187.76;BASRP=0;BASSR=11;BEID=asm254-2987;BEIDH=-1;BEIDL=17;BQ=409.81;BSC=13;BSCQ=222.05;BUM=0;BUMQ=0.00;BVF=13;CAS=0;CASQ=0.00;CQ=376.05;EVENT=gridss254_2832;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=322;REFPAIR=34;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:187.76:0:11:409.81:13:222.05:0:0.00:13:0.00:0:0.00:0.00:0.00:322:34:0:0.00:0:0.00:0
17	41247125	gridss254_1336b	T	TCCTATTTCC.	407.99	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=203.99;BASRP=0;BASSR=12;BEID=asm254-1280;BEIDH=-1;BEIDL=0;BQ=407.99;BSC=12;BSCQ=203.99;BUM=0;BUMQ=0.00;BVF=12;CAS=0;CASQ=0.00;CQ=390.84;EVENT=gridss254_1336;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=329;REFPAIR=30;RP=0;RPQ=0.00;SB=0.16666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:203.99:0:12:407.99:12:203.99:0:0.00:12:0.00:0:0.00:0.00:0.00:329:30:0:0.00:0:0.00:0
17	41248607	gridss254_1359b	A	AATGGGTCACACAATATTTCTAAGGGTGGGTAGGTATAAGATATGGGATTACTTAGAGTTTATTATAAA.	598.42	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=104.27;BASRP=0;BASSR=4;BEID=asm254-1283;BEIDH=-1;BEIDL=0;BQ=598.42;BSC=18;BSCQ=494.15;BUM=0;BUMQ=0.00;BVF=18;CAS=0;CASQ=0.00;CQ=208.54;EVENT=gridss254_1359;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=80;REFPAIR=14;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:104.27:0:4:598.42:18:494.15:0:0.00:18:0.00:0:0.00:0.00:0.00:80:14:0:0.00:0:0.00:0
17	41264738	gridss254_140o	C	CTTCATCAGTAGGGGTTTCAAGT[17:41264766[	1026.31	NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=38;BANSRQ=970.68;BAQ=0.00;BASRP=0;BASSR=0;BQ=1699.02;BSC=78;BSCQ=1699.02;BUM=0;BUMQ=0.00;BVF=73;CAS=0;CASQ=0.00;CQ=960.01;EVENT=gridss254_140;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss254_140h;RAS=0;RASQ=0.00;REF=48;REFPAIR=127;RP=0;RPQ=0.00;SB=0.90677965;SC=53M1X;SR=40;SRQ=1026.31;SVTYPE=BND;VF=39	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:38:970.68:0.00:0:0:1699.02:78:1699.02:0:0.00:73:0.00:0:0.00:1026.31:0.00:48:127:0:0.00:40:1026.31:39
17	41264766	gridss254_140h	T	]17:41264738]TTCATCAGTAGGGGTTTCAAGTT	1026.31	NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=40;BANSRQ=1026.31;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=960.01;EVENT=gridss254_140;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss254_140o;RAS=0;RASQ=0.00;REF=203;REFPAIR=44;RP=0;RPQ=0.00;SB=0.775;SC=1X48M;SR=40;SRQ=1026.31;SVTYPE=BND;VF=39	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:40:1026.31:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:1026.31:0.00:203:44:0:0.00:40:1026.31:39
17	41268209	gridss254_3041b	T	.TTACTAGCACTT	104.34	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=52.17;BASRP=0;BASSR=3;BEID=asm254-3203;BEIDH=-1;BEIDL=11;BQ=104.34;BSC=3;BSCQ=52.17;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=104.34;EVENT=gridss254_3041;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=125;REFPAIR=19;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:52.17:0:3:104.34:3:52.17:0:0.00:3:0.00:0:0.00:0.00:0.00:125:19:0:0.00:0:0.00:0
17	41275367	gridss254_3089b	T	.TTTAATAAAAAAACATTTTTTAAAAAAAGTTTTTCCAAAAAACATTCCCTTTATCCAACCCCCCACCCCCCTTT	1333.54	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=111.09;BASRP=0;BASSR=4;BEID=asm254-3259;BEIDH=-1;BEIDL=73;BQ=1333.54;BSC=44;BSCQ=1222.45;BUM=0;BUMQ=0.00;BVF=44;CAS=0;CASQ=0.00;CQ=904.26;EVENT=gridss254_3089;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=129;REFPAIR=40;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:111.09:0:4:1333.54:44:1222.45:0:0.00:44:0.00:0:0.00:0.00:0.00:129:40:0:0.00:0:0.00:0
17	41275391	gridss254_1583b	T	TTAAGTGGAGTTGTGCTCTTT.	331.51	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=114.13;BASRP=0;BASSR=6;BEID=asm254-1597;BEIDH=-1;BEIDL=0;BQ=331.51;BSC=11;BSCQ=217.38;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=249.81;EVENT=gridss254_1583;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=64;REFPAIR=21;RP=0;RPQ=0.00;SB=0.9411765;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:114.13:0:6:331.51:11:217.38:0:0.00:11:0.00:0:0.00:0.00:0.00:64:21:0:0.00:0:0.00:0
17	41278006	gridss254_3142b	T	.GGAGTGTT	306.50	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=135.40;BASRP=0;BASSR=8;BEID=asm254-3269;BEIDH=-1;BEIDL=7;BQ=306.50;BSC=10;BSCQ=171.10;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=270.80;EVENT=gridss254_3142;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=312;REFPAIR=24;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:135.40:0:8:306.50:10:171.10:0:0.00:10:0.00:0:0.00:0.00:0.00:312:24:0:0.00:0:0.00:0
17	41278009	gridss254_1634b	T	TGTTATGT.	457.69	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=219.83;BASRP=0;BASSR=13;BEID=asm254-1588;BEIDH=-1;BEIDL=0;BQ=457.69;BSC=14;BSCQ=237.85;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=457.69;EVENT=gridss254_1634;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=295;REFPAIR=27;RP=0;RPQ=0.00;SB=0.5925926;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:219.83:0:13:457.69:14:237.85:0:0.00:14:0.00:0:0.00:0.00:0.00:295:27:0:0.00:0:0.00:0
17	41463817	gridss254_1662b	A	AGCGGAGACTAAAGATGACTAAAGAATCACGGGTGGAGCCACGCTGCT.	413.46	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=84.70;BASRP=0;BASSR=4;BEID=asm254-1692;BEIDH=-1;BEIDL=0;BQ=413.46;BSC=15;BSCQ=328.76;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=297.48;EVENT=gridss254_1662;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=1231;REFPAIR=74;RP=0;RPQ=0.00;SB=0.2631579;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:84.70:0:4:413.46:15:328.76:0:0.00:15:0.00:0:0.00:0.00:0.00:1231:74:0:0.00:0:0.00:0
17	41463839	gridss254_3172b	A	.ATGCATACA	138.06	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=17.34;BASRP=0;BASSR=1;BEID=asm254-3391;BEIDH=-1;BEIDL=8;BQ=138.06;BSC=6;BSCQ=120.72;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=76.32;EVENT=gridss254_3172;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=1149;REFPAIR=47;RP=0;RPQ=0.00;SB=0.1;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:17.34:0:1:138.06:6:120.72:0:0.00:6:0.00:0:0.00:0.00:0.00:1149:47:0:0.00:0:0.00:0
17	41463888	gridss254_1672b	C	CGTTCCGTGATCAATGGCTTATACTACCTGCACCTCAGTTTTTCCCGGGCAAAAAAGGAAGCTTGCTGCCGGTGCGTT.	5402.58	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=2691.70;BASRP=0;BASSR=88;BEID=asm254-1691;BEIDH=-1;BEIDL=0;BQ=5402.58;BSC=89;BSCQ=2710.88;BUM=0;BUMQ=0.00;BVF=89;CAS=0;CASQ=0.00;CQ=5312.13;EVENT=gridss254_1672;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=204;REFPAIR=9;RP=0;RPQ=0.00;SB=0.12429378;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:2691.70:0:88:5402.58:89:2710.88:0:0.00:89:0.00:0:0.00:0.00:0.00:204:9:0:0.00:0:0.00:0
17	56771841	gridss256_2815b	T	.TTTGAGGAAAATTTTTATTTTTTTTTTGGTGGCTAAAAAAAAGAATACTTTTTTTAAGGAAAAATT	494.09	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=51.38;BASRP=0;BASSR=2;BEID=asm256-2830;BEIDH=-1;BEIDL=65;BQ=494.09;BSC=16;BSCQ=442.71;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=155.63;EVENT=gridss256_2815;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=111;REFPAIR=31;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:51.38:0:2:494.09:16:442.71:0:0.00:16:0.00:0:0.00:0.00:0.00:111:31:0:0.00:0:0.00:0
17	56802321	gridss256_48o	T	T[17:56802356[	159.71	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.37;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-351;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-9,9;CQ=159.71;EVENT=gridss256_48;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_48h;RAS=0;RASQ=0.00;REF=415;REFPAIR=42;RP=6;RPQ=106.34;SC=282M1X43N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.37:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:159.71:0.00:415:42:6:106.34:0:0.00:6
17	56802356	gridss256_48h	T	]17:56802321]T	159.71	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=52.98;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-351;BEIDH=0;BEIDL=2;BQ=25.12;BSC=1;BSCQ=25.12;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-22,22;CQ=159.71;EVENT=gridss256_48;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_48o;RAS=1;RASQ=53.37;REF=419;REFPAIR=51;RP=6;RPQ=106.34;SB=1.0;SC=1X17N1X308M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:3:52.98:0:0.00:0.00:0:0:25.12:1:25.12:0:0.00:1:0.00:0:0.00:159.71:53.37:419:51:6:106.34:0:0.00:6
17	56811951	gridss256_3174b	T	.TTTCCCCCTTTTTTTTCCCCTTTTTTTTTAAAATTTTTGGAAAAAACTTTTCATTTTTTTTTTTTGT	166.90	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=40.00;BASRP=0;BASSR=2;BEID=asm256-3210;BEIDH=-1;BEIDL=66;BQ=166.90;BSC=4;BSCQ=126.90;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=787.88;EVENT=gridss256_3174;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=124;REFPAIR=19;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:40.00:0:2:166.90:4:126.90:0:0.00:4:0.00:0:0.00:0.00:0.00:124:19:0:0.00:0:0.00:0
17	58680161	gridss256_804b	A	AAAAAGCTAATTTTTTTTACTGTTTTTACAAATAAAAAATATGTACT.	905.47	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=3;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=322.70;BASRP=0;BASSR=14;BEID=asm256-482,asm256-483,asm256-486;BEIDH=-1,-1,-1;BEIDL=0,0,0;BQ=905.47;BSC=24;BSCQ=582.77;BUM=0;BUMQ=0.00;BVF=25;CAS=0;CASQ=0.00;CQ=430.35;EVENT=gridss256_804;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=134;REFPAIR=37;RP=0;RPQ=0.00;SB=0.9736842;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:322.70:0:14:905.47:24:582.77:0:0.00:25:0.00:0:0.00:0.00:0.00:134:37:0:0.00:0:0.00:0
17	58740012	gridss256_104o	A	A[17:58740094[	141.75	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=70.87;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1075;BEIDH=2;BEIDL=0;BQ=79.31;BSC=4;BSCQ=79.31;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-25,26;CIRPOS=-12,12;CQ=141.75;EVENT=gridss256_104;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_104h;RAS=0;RASQ=0.00;REF=467;REFPAIR=55;RP=4;RPQ=70.87;SB=0.25;SC=126M4D145M1X50N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:70.87:4:0:0:0.00:0:0.00:0.00:0:0:79.31:4:79.31:0:0.00:4:0.00:0:0.00:141.75:0.00:467:55:4:70.87:0:0.00:4
17	58740094	gridss256_104h	T	]17:58740012]T	141.75	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1075;BEIDH=0;BEIDL=2;BQ=43.45;BSC=2;BSCQ=43.45;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-12,12;CIRPOS=-25,26;CQ=141.75;EVENT=gridss256_104;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_104o;RAS=1;RASQ=70.87;REF=472;REFPAIR=38;RP=4;RPQ=70.87;SB=0.5;SC=1X23N1X241M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:0:0.00:0:0.00:0.00:0:0:43.45:2:43.45:0:0.00:2:0.00:0:0.00:141.75:70.87:472:38:4:70.87:0:0.00:4
17	59760850	gridss256_119o	T	T[17:59760907[	195.81	LOW_QUAL	AS=1;ASQ=88.96;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1234,asm256-3982;BEIDH=2,157;BEIDL=0,0;BQ=61.95;BSC=3;BSCQ=61.95;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-21,21;CIRPOS=-8,8;CQ=195.81;EVENT=gridss256_119;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_119h;RAS=1;RASQ=0.00;REF=374;REFPAIR=31;RP=6;RPQ=106.84;SB=0.33333334;SC=157M27D100M1X41N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:88.96:5:0:0:0.00:0:0.00:0.00:0:0:61.95:3:61.95:0:0.00:3:0.00:0:0.00:195.81:0.00:374:31:6:106.84:0:0.00:6
17	59760907	gridss256_119h	G	]17:59760850]G	195.81	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1234,asm256-3982;BEIDH=0,0;BEIDL=2,157;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-21,21;CQ=195.81;EVENT=gridss256_119;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_119o;RAS=1;RASQ=88.96;REF=418;REFPAIR=47;RP=6;RPQ=106.84;SC=1X15N1X186M23D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:195.81:88.96:418:47:6:106.84:0:0.00:6
17	59761231	gridss256_121o	G	G[17:59761285[	141.89	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.29;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1236;BEIDH=2;BEIDL=0;BQ=23.94;BSC=1;BSCQ=23.94;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-12,12;CQ=141.89;EVENT=gridss256_121;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_121h;RAS=0;RASQ=0.00;REF=578;REFPAIR=40;RP=5;RPQ=88.60;SB=1.0;SC=216M1D100M1X8N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.29:3:0:0:0.00:0:0.00:0.00:0:0:23.94:1:23.94:0:0.00:1:0.00:0:0.00:141.89:0.00:578:40:5:88.60:0:0.00:5
17	59761285	gridss256_121h	A	]17:59761231]A	141.89	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=4;BANRPQ=71.26;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1236;BEIDH=0;BEIDL=2;BQ=16.62;BSC=1;BSCQ=16.62;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-12,12;CIRPOS=-4,5;CQ=141.89;EVENT=gridss256_121;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_121o;RAS=1;RASQ=53.29;REF=496;REFPAIR=36;RP=5;RPQ=88.60;SB=0.0;SC=1X23N1X128M29D145M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:4:71.26:0:0.00:0.00:0:0:16.62:1:16.62:0:0.00:1:0.00:0:0.00:141.89:53.29:496:36:5:88.60:0:0.00:5
17	59798649	gridss256_1495b	T	TTTAAAAAGGATTTTTTCT.	127.69	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=54.77;BASRP=0;BASSR=3;BEID=asm256-1326;BEIDH=-1;BEIDL=0;BQ=127.69;BSC=4;BSCQ=72.92;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=109.53;EVENT=gridss256_1495;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=21;REFPAIR=16;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:54.77:0:3:127.69:4:72.92:0:0.00:4:0.00:0:0.00:0.00:0.00:21:16:0:0.00:0:0.00:0
17	59800833	gridss256_143o	C	C[17:59800920[	196.21	LOW_QUAL	AS=1;ASQ=89.12;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1414,asm256-4142;BEIDH=2,236;BEIDL=0,0;BQ=79.73;BSC=4;BSCQ=79.73;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-35,36;CIRPOS=-6,7;CQ=196.21;EVENT=gridss256_143;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_143h;RAS=1;RASQ=0.00;REF=399;REFPAIR=28;RP=6;RPQ=107.08;SB=0.75;SC=255M1X70N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:89.12:5:0:0:0.00:0:0.00:0.00:0:0:79.73:4:79.73:0:0.00:4:0.00:0:0.00:196.21:0.00:399:28:6:107.08:0:0.00:6
17	59800920	gridss256_143h	A	]17:59800833]A	196.21	LOW_QUAL	AS=1;ASQ=0.00;ASRP=5;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1414,asm256-4142;BEIDH=0,0;BEIDL=2,236;BQ=21.72;BSC=1;BSCQ=21.72;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-6,7;CIRPOS=-35,36;CQ=196.21;EVENT=gridss256_143;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_143o;RAS=1;RASQ=89.12;REF=423;REFPAIR=29;RP=6;RPQ=107.08;SB=0.0;SC=1X12N1X313M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:5:0:0:0.00:0:0.00:0.00:0:0:21.72:1:21.72:0:0.00:1:0.00:0:0.00:196.21:89.12:423:29:6:107.08:0:0.00:6
17	59801646	gridss256_144o	A	A[17:59801681[	53.39	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=44.76;BSC=2;BSCQ=44.76;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-13,14;CIRPOS=-19,20;CQ=53.39;EVENT=gridss256_144;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_144h;RAS=0;RASQ=0.00;REF=367;REFPAIR=40;RP=3;RPQ=53.39;SB=0.0;SC=105M94D100M1X26N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:44.76:2:44.76:0:0.00:2:0.00:0:0.00:53.39:0.00:367:40:3:53.39:0:0.00:3
17	59801681	gridss256_144h	T	]17:59801646]T	53.39	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=38.84;BSC=2;BSCQ=38.84;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-13,14;CQ=53.39;EVENT=gridss256_144;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_144o;RAS=0;RASQ=0.00;REF=364;REFPAIR=41;RP=3;RPQ=53.39;SB=0.5;SC=1X38N1X100M49D138M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:38.84:2:38.84:0:0.00:2:0.00:0:0.00:53.39:0.00:364:41:3:53.39:0:0.00:3
17	59802359	gridss256_147o	T	T[17:59802395[	53.08	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=21.20;BSC=1;BSCQ=21.20;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-15,16;CQ=53.08;EVENT=gridss256_147;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_147h;RAS=0;RASQ=0.00;REF=321;REFPAIR=35;RP=3;RPQ=53.08;SB=0.0;SC=129M93D100M1X3N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:21.20:1:21.20:0:0.00:1:0.00:0:0.00:53.08:0.00:321:35:3:53.08:0:0.00:3
17	59802395	gridss256_147h	G	]17:59802359]G	53.08	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-2,2;CQ=53.08;EVENT=gridss256_147;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_147o;RAS=0;RASQ=0.00;REF=279;REFPAIR=27;RP=3;RPQ=53.08;SC=1X30N1X115M79D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:53.08:0.00:279:27:3:53.08:0:0.00:3
17	59804567	gridss256_153o	C	C[17:59804606[	142.03	LOW_QUAL	AS=1;ASQ=53.53;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1415,asm256-4195;BEIDH=2,264;BEIDL=0,0;BQ=43.75;BSC=2;BSCQ=43.75;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-31,32;CIRPOS=-3,3;CQ=142.03;EVENT=gridss256_153;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_153h;RAS=1;RASQ=0.00;REF=366;REFPAIR=38;RP=5;RPQ=88.50;SB=0.5;SC=263M1X62N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.53:3:0:0:0.00:0:0.00:0.00:0:0:43.75:2:43.75:0:0.00:2:0.00:0:0.00:142.03:0.00:366:38:5:88.50:0:0.00:5
17	59804606	gridss256_153h	A	]17:59804567]A	142.03	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1415,asm256-4195;BEIDH=0,0;BEIDL=2,264;BQ=79.61;BSC=3;BSCQ=79.61;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-3,3;CIRPOS=-31,32;CQ=142.03;EVENT=gridss256_153;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_153o;RAS=1;RASQ=53.53;REF=361;REFPAIR=35;RP=5;RPQ=88.50;SB=0.33333334;SC=1X5N1X306M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:79.61:3:79.61:0:0.00:2:0.00:0:0.00:142.03:53.53:361:35:5:88.50:0:0.00:5
17	59811527	gridss256_160o	C	C[17:59811566[	53.04	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=17.34;BSC=1;BSCQ=17.34;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-8,8;CIRPOS=-3,4;CQ=53.04;EVENT=gridss256_160;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_160h;RAS=0;RASQ=0.00;REF=416;REFPAIR=49;RP=3;RPQ=53.04;SB=0.0;SC=18M1D113M79D100M1X15N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:17.34:1:17.34:0:0.00:1:0.00:0:0.00:53.04:0.00:416:49:3:53.04:0:0.00:3
17	59811566	gridss256_160h	A	]17:59811527]A	53.04	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=25.12;BSC=1;BSCQ=25.12;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-3,4;CIRPOS=-8,8;CQ=53.04;EVENT=gridss256_160;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_160o;RAS=0;RASQ=0.00;REF=379;REFPAIR=51;RP=3;RPQ=53.04;SB=1.0;SC=1X6N1X135M83D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:25.12:1:25.12:0:0.00:1:0.00:0:0.00:53.04:0.00:379:51:3:53.04:0:0.00:3
17	59833902	gridss256_172o	A	A[17:59833972[	53.15	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=40.95;BSC=2;BSCQ=40.95;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-20,21;CIRPOS=-15,16;CQ=53.15;EVENT=gridss256_172;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_172h;RAS=0;RASQ=0.00;REF=414;REFPAIR=37;RP=3;RPQ=53.15;SB=0.5;SC=179M23D100M1X40N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:40.95:2:40.95:0:0.00:2:0.00:0:0.00:53.15:0.00:414:37:3:53.15:0:0.00:3
17	59833972	gridss256_172h	T	]17:59833902]T	53.15	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=38.89;BSC=2;BSCQ=38.89;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-15,16;CIRPOS=-20,21;CQ=53.15;EVENT=gridss256_172;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_172o;RAS=0;RASQ=0.00;REF=404;REFPAIR=50;RP=3;RPQ=53.15;SB=0.0;SC=1X30N1X100M94D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:38.89:2:38.89:0:0.00:2:0.00:0:0.00:53.15:0.00:404:50:3:53.15:0:0.00:3
17	59834267	gridss256_174o	A	A[17:59834302[	141.39	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=70.69;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1736;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-2,3;CQ=141.39;EVENT=gridss256_174;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_174h;RAS=0;RASQ=0.00;REF=426;REFPAIR=43;RP=4;RPQ=70.69;SC=184M37D100M1X4N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:70.69:4:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:141.39:0.00:426:43:4:70.69:0:0.00:4
17	59834302	gridss256_174h	A	]17:59834267]A	141.39	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=3;BANRPQ=53.27;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-1736;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-2,3;CIRPOS=-2,3;CQ=141.39;EVENT=gridss256_174;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_174o;RAS=1;RASQ=70.69;REF=398;REFPAIR=41;RP=4;RPQ=70.69;SC=1X4N1X293M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:4:0:3:53.27:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:141.39:70.69:398:41:4:70.69:0:0.00:4
17	59884056	gridss256_4525b	T	.TGTTTTTGGT	138.73	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=69.37;BASRP=0;BASSR=4;BEID=asm256-4807;BEIDH=-1;BEIDL=9;BQ=138.73;BSC=4;BSCQ=69.37;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=138.73;EVENT=gridss256_4525;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=110;REFPAIR=28;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:69.37:0:4:138.73:4:69.37:0:0.00:4:0.00:0:0.00:0.00:0.00:110:28:0:0.00:0:0.00:0
17	59884070	gridss256_2189b	G	GGTTGTTTTT.	204.93	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=102.46;BASRP=0;BASSR=6;BEID=asm256-2090;BEIDH=-1;BEIDL=0;BQ=204.93;BSC=6;BSCQ=102.46;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=204.93;EVENT=gridss256_2189;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=87;REFPAIR=18;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:102.46:0:6:204.93:6:102.46:0:0.00:6:0.00:0:0.00:0.00:0.00:87:18:0:0.00:0:0.00:0
17	59887541	gridss256_223o	T	T[17:59887626[	159.54	LOW_QUAL	AS=1;ASQ=53.23;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-2295,asm256-4943;BEIDH=2,175;BEIDL=0,0;BQ=79.36;BSC=4;BSCQ=79.36;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-52,52;CIRPOS=-5,6;CQ=142.17;EVENT=gridss256_223;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_223h;RAS=1;RASQ=0.00;REF=383;REFPAIR=29;RP=6;RPQ=106.31;SB=0.5;SC=222M1X103N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.23:3:0:0:0.00:0:0.00:0.00:0:0:79.36:4:79.36:0:0.00:4:0.00:0:0.00:159.54:0.00:383:29:6:106.31:0:0.00:6
17	59887626	gridss256_223h	T	]17:59887541]T	159.54	LOW_QUAL	AS=1;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-2295,asm256-4943;BEIDH=0,0;BEIDL=2,175;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-5,6;CIRPOS=-52,52;CQ=142.17;EVENT=gridss256_223;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_223o;RAS=1;RASQ=53.23;REF=469;REFPAIR=38;RP=6;RPQ=106.31;SC=1X10N1X52M11D252M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:159.54:53.23:469:38:6:106.31:0:0.00:6
17	59889976	gridss256_2287b	A	AAAAAAAGGGAAAAAAATTTAAATTTAAAACAAAAAATTTTAAAAATTA.	328.66	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=61.53;BASRP=0;BASSR=3;BEID=asm256-2186;BEIDH=-1;BEIDL=0;BQ=328.66;BSC=11;BSCQ=267.13;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=211.89;EVENT=gridss256_2287;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=246;REFPAIR=29;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:61.53:0:3:328.66:11:267.13:0:0.00:11:0.00:0:0.00:0.00:0.00:246:29:0:0.00:0:0.00:0
17	59890758	gridss256_230o	T	T[17:59890895[	107.11	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.55;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-2299;BEIDH=2;BEIDL=0;BQ=17.76;BSC=1;BSCQ=17.76;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-30,31;CIRPOS=-30,31;CQ=107.11;EVENT=gridss256_230;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_230h;RAS=0;RASQ=0.00;REF=131;REFPAIR=26;RP=3;RPQ=53.55;SB=1.0;SC=265M1X60N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.55:3:0:0:0.00:0:0.00:0.00:0:0:17.76:1:17.76:0:0.00:1:0.00:0:0.00:107.11:0.00:131:26:3:53.55:0:0.00:3
17	59890895	gridss256_230h	A	]17:59890758]A	107.11	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-2299;BEIDH=0;BEIDL=2;BQ=22.43;BSC=1;BSCQ=22.43;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-30,31;CIRPOS=-30,31;CQ=107.11;EVENT=gridss256_230;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_230o;RAS=1;RASQ=53.55;REF=348;REFPAIR=43;RP=3;RPQ=53.55;SB=0.0;SC=1X60N1X164M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:22.43:1:22.43:0:0.00:1:0.00:0:0.00:107.11:53.55:348:43:3:53.55:0:0.00:3
17	59926345	gridss256_256o	T	T[17:59926423[	212.58	LOW_QUAL	AS=1;ASQ=106.29;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-2621,asm256-5259;BEIDH=2,263;BEIDL=0,0;BQ=21.20;BSC=1;BSCQ=21.20;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-32,32;CQ=212.58;EVENT=gridss256_256;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_256h;RAS=1;RASQ=0.00;REF=271;REFPAIR=34;RP=6;RPQ=106.29;SB=0.0;SC=262M1X63N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:106.29:6:0:0:0.00:0:0.00:0.00:0:0:21.20:1:21.20:0:0.00:1:0.00:0:0.00:212.58:0.00:271:34:6:106.29:0:0.00:6
17	59926423	gridss256_256h	A	]17:59926345]A	212.58	LOW_QUAL	AS=1;ASQ=0.00;ASRP=6;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-2621,asm256-5259;BEIDH=0,0;BEIDL=2,263;BQ=49.17;BSC=2;BSCQ=49.17;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-32,32;CIRPOS=-32,32;CQ=212.58;EVENT=gridss256_256;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_256o;RAS=1;RASQ=106.29;REF=328;REFPAIR=25;RP=6;RPQ=106.29;SB=0.5;SC=1X63N1X201M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:6:0:0:0.00:0:0.00:0.00:0:0:49.17:2:49.17:0:0.00:2:0.00:0:0.00:212.58:106.29:328:25:6:106.29:0:0.00:6
17	59941034	gridss256_2715b	A	AAAAAGGGCCCAAGGTTCG.	893.37	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=79.07;BASRP=0;BASSR=4;BEID=asm256-2751;BEIDH=-1;BEIDL=0;BQ=893.37;BSC=32;BSCQ=814.29;BUM=0;BUMQ=0.00;BVF=31;CAS=0;CASQ=0.00;CQ=421.94;EVENT=gridss256_2715;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=164;REFPAIR=32;RP=0;RPQ=0.00;SB=0.9722222;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:79.07:0:4:893.37:32:814.29:0:0.00:31:0.00:0:0.00:0.00:0.00:164:32:0:0.00:0:0.00:0
18	20564804	gridss260_349b	T	.AGTGCTTTT	153.76	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=68.11;BASRP=0;BASSR=4;BEID=asm260-342;BEIDH=-1;BEIDL=8;BQ=153.76;BSC=5;BSCQ=85.65;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=153.76;EVENT=gridss260_349;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=134;REFPAIR=15;RP=0;RPQ=0.00;SB=0.8888889;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:68.11:0:4:153.76:5:85.65:0:0.00:5:0.00:0:0.00:0.00:0.00:134:15:0:0.00:0:0.00:0
18	48744592	gridss263_41b	A	ACTCTCTAGGCTTC.	106.83	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=53.41;BASRP=0;BASSR=3;BEID=asm263-47;BEIDH=-1;BEIDL=0;BQ=106.83;BSC=3;BSCQ=53.41;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=106.83;EVENT=gridss263_41;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=93;REFPAIR=12;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:53.41:0:3:106.83:3:53.41:0:0.00:3:0.00:0:0.00:0.00:0.00:93:12:0:0.00:0:0.00:0
19	45874219	gridss270_127b	A	AAAGTCTGAGGGGGGTAAAGAATAAAGGGAGAAGAA.	262.20	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=75.73;BASRP=0;BASSR=4;BEID=asm270-114;BEIDH=-1;BEIDL=0;BQ=262.20;BSC=9;BSCQ=186.48;BUM=0;BUMQ=0.00;BVF=9;CAS=0;CASQ=0.00;CQ=153.70;EVENT=gridss270_127;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=79;REFPAIR=18;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:75.73:0:4:262.20:9:186.48:0:0.00:9:0.00:0:0.00:0.00:0.00:79:18:0:0.00:0:0.00:0
20	37453529	gridss276_26b	T	.TGGTAGGTGCCTGTAATCCCAGCTACTT	132.93	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=56.18;BASRP=0;BASSR=3;BEID=asm276-29;BEIDH=-1;BEIDL=27;BQ=132.93;BSC=4;BSCQ=76.75;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=114.61;EVENT=gridss276_26;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=18;REFPAIR=0;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:56.18:0:3:132.93:4:76.75:0:0.00:4:0.00:0:0.00:0.00:0.00:18:0:0:0.00:0:0.00:0
20	60512272	gridss278_179b	T	.TTCTCTTTATTTTAAATTCCTCAAAAAAAAAAACTTT	276.11	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=22.00;BASRP=0;BASSR=2;BEID=asm278-190;BEIDH=-1;BEIDL=36;BQ=276.11;BSC=10;BSCQ=254.11;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=123.64;EVENT=gridss278_179;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=36;REFPAIR=10;RP=0;RPQ=0.00;SB=0.07692308;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:22.00:0:2:276.11:10:254.11:0:0.00:10:0.00:0:0.00:0.00:0.00:36:10:0:0.00:0:0.00:0
20	60512340	gridss278_185b	A	.GGTACA	232.69	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=116.34;BASRP=0;BASSR=7;BEID=asm278-185;BEIDH=-1;BEIDL=5;BQ=232.69;BSC=7;BSCQ=116.34;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=232.69;EVENT=gridss278_185;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=107;REFPAIR=30;RP=0;RPQ=0.00;SB=0.85714287;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:116.34:0:7:232.69:7:116.34:0:0.00:6:0.00:0:0.00:0.00:0.00:107:30:0:0.00:0:0.00:0
20	60512877	gridss278_187b	C	.CCAGGATCC	148.85	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=51.35;BASRP=0;BASSR=3;BEID=asm278-186;BEIDH=-1;BEIDL=8;BQ=148.85;BSC=5;BSCQ=97.50;BUM=0;BUMQ=0.00;BVF=5;CAS=0;CASQ=0.00;CQ=120.71;EVENT=gridss278_187;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=104;REFPAIR=12;RP=0;RPQ=0.00;SB=0.625;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:51.35:0:3:148.85:5:97.50:0:0.00:5:0.00:0:0.00:0.00:0.00:104:12:0:0.00:0:0.00:0
22	29088482	gridss286_136b	T	TGTTTTAAGT.	197.25	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=90.13;BASRP=0;BASSR=5;BEID=asm286-28;BEIDH=-1;BEIDL=0;BQ=197.25;BSC=6;BSCQ=107.13;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=180.25;EVENT=gridss286_136;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=144;REFPAIR=18;RP=0;RPQ=0.00;SB=0.09090909;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:90.13:0:5:197.25:6:107.13:0:0.00:6:0.00:0:0.00:0.00:0.00:144:18:0:0.00:0:0.00:0
22	29103840	gridss286_283b	T	TTTTGTGA.	189.86	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=77.17;BASRP=0;BASSR=4;BEID=asm286-239;BEIDH=-1;BEIDL=0;BQ=189.86;BSC=6;BSCQ=112.68;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=154.35;EVENT=gridss286_283;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=18;REFPAIR=10;RP=0;RPQ=0.00;SB=0.7;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:77.17:0:4:189.86:6:112.68:0:0.00:6:0.00:0:0.00:0.00:0.00:18:10:0:0.00:0:0.00:0
22	29108040	gridss286_28o	T	T[22:29108090[	70.86	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=69.27;BSC=3;BSCQ=69.27;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-18,18;CIRPOS=-24,25;CQ=70.86;EVENT=gridss286_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss286_28h;RAS=0;RASQ=0.00;REF=376;REFPAIR=20;RP=4;RPQ=70.86;SB=0.33333334;SC=290M1X35N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:69.27:3:69.27:0:0.00:3:0.00:0:0.00:70.86:0.00:376:20:4:70.86:0:0.00:4
22	29108090	gridss286_28h	A	]22:29108040]A	70.86	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=41.74;BSC=2;BSCQ=41.74;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-24,25;CIRPOS=-18,18;CQ=70.86;EVENT=gridss286_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss286_28o;RAS=0;RASQ=0.00;REF=333;REFPAIR=22;RP=4;RPQ=70.86;SB=0.5;SC=1X48N1X166M14D58M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:41.74:2:41.74:0:0.00:2:0.00:0:0.00:70.86:0.00:333:22:4:70.86:0:0.00:4
22	29116098	gridss286_381b	T	TTTTGAGA.	195.72	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=86.37;BASRP=0;BASSR=5;BEID=asm286-345;BEIDH=-1;BEIDL=0;BQ=195.72;BSC=6;BSCQ=109.35;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=172.73;EVENT=gridss286_381;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=59;REFPAIR=9;RP=0;RPQ=0.00;SB=0.27272728;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:86.37:0:5:195.72:6:109.35:0:0.00:6:0.00:0:0.00:0.00:0.00:59:9:0:0.00:0:0.00:0
X	14863139	gridss290_6o	G	G[X:14863257[	53.16	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm290-155;BEIDH=186;BEIDL=0;BQ=43.43;BSC=2;BSCQ=43.43;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-70,71;CIRPOS=-44,45;CQ=53.16;EVENT=gridss290_6;IC=0;IMPRECISE;IQ=0.00;PARID=gridss290_6h;RAS=1;RASQ=0.00;REF=343;REFPAIR=21;RP=3;RPQ=53.16;SB=0.0;SC=185M1X140N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:43.43:2:43.43:0:0.00:2:0.00:0:0.00:53.16:0.00:343:21:3:53.16:0:0.00:3
X	14863257	gridss290_6h	T	]X:14863139]T	53.16	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm290-155;BEIDH=0;BEIDL=186;BQ=18.02;BSC=1;BSCQ=18.02;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-44,45;CIRPOS=-70,71;CQ=53.16;EVENT=gridss290_6;IC=0;IMPRECISE;IQ=0.00;PARID=gridss290_6o;RAS=0;RASQ=0.00;REF=277;REFPAIR=23;RP=3;RPQ=53.16;SB=1.0;SC=1X88N1X101M35D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:18.02:1:18.02:0:0.00:1:0.00:0:0.00:53.16:0.00:277:23:3:53.16:0:0.00:3
X	124689714	gridss301_15b	T	.TAACATATCTGTCAGATCACATACTTATCATTTTTGGGGGTGAGAACATTTAAAATTT	144.17	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=72.08;BASRP=0;BASSR=3;BEID=asm301-9;BEIDH=-1;BEIDL=57;BQ=144.17;BSC=3;BSCQ=72.08;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=144.17;EVENT=gridss301_15;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=226;REFPAIR=28;RP=0;RPQ=0.00;SB=0.33333334;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:72.08:0:3:144.17:3:72.08:0:0.00:3:0.00:0:0.00:0.00:0.00:226:28:0:0.00:0:0.00:0
X	124689714	gridss301_3b	T	TCATTTTTGGGGGTGAGAACATTTAAAATTTACACCTTGCCTGGCCTATTTCACTCAGCCTAATGTTCTCCAATT.	238.19	LOW_QUAL	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=96.10;BASRP=0;BASSR=4;BEID=asm301-1;BEIDH=-1;BEIDL=0;BQ=238.19;BSC=6;BSCQ=142.09;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=192.21;EVENT=gridss301_3;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=223;REFPAIR=29;RP=0;RPQ=0.00;SB=0.5;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:96.10:0:4:238.19:6:142.09:0:0.00:6:0.00:0:0.00:0.00:0.00:223:29:0:0.00:0:0.00:0
X	154303567	gridss304_598b	C	.ATGCTAAGCCCACTCTTTCCCCTGAAACTCTTGTACCATTTCATTGTTCTGGTTTTGCCTTCTTTGTCTTCCTC	2940.93	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=1441.18;BASRP=0;BASSR=65;BEID=asm304-556;BEIDH=-1;BEIDL=73;BQ=2940.93;BSC=68;BSCQ=1499.75;BUM=0;BUMQ=0.00;BVF=64;CAS=0;CASQ=0.00;CQ=2839.66;EVENT=gridss304_598;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=329;REFPAIR=26;RP=0;RPQ=0.00;SB=0.59398496;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:1441.18:0:65:2940.93:68:1499.75:0:0.00:64:0.00:0:0.00:0.00:0.00:329:26:0:0.00:0:0.00:0
X	154303571	gridss304_130b	G	GAAACTCTTGTACCATTTCATTGTTCTGGTTTTGCCTTCTTTGTCTTCCTCCCTGGCCCTTCTTGTTCTTCCCCAC.	4368.76	PASS	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=2151.12;BASRP=0;BASSR=91;BEID=asm304-10;BEIDH=-1;BEIDL=0;BQ=4368.76;BSC=94;BSCQ=2217.64;BUM=0;BUMQ=0.00;BVF=81;CAS=0;CASQ=0.00;CQ=4296.63;EVENT=gridss304_130;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=310;REFPAIR=33;RP=0;RPQ=0.00;SB=0.47311828;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:2151.12:0:91:4368.76:94:2217.64:0:0.00:81:0.00:0:0.00:0.00:0.00:310:33:0:0.00:0:0.00:0
X	154306942	gridss304_19o	T	T[X:154307017[	143.09	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.63;ASRP=3;ASSR=0;BA=0;BANRP=2;BANRPQ=35.84;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-232;BEIDH=2;BEIDL=0;BQ=76.50;BSC=4;BSCQ=76.50;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-25,25;CIRPOS=-4,5;CQ=143.09;EVENT=gridss304_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_19h;RAS=0;RASQ=0.00;REF=377;REFPAIR=36;RP=5;RPQ=89.47;SB=0.5;SC=123M9D144M1X49N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.63:3:0:2:35.84:0:0.00:0.00:0:0:76.50:4:76.50:0:0.00:3:0.00:0:0.00:143.09:0.00:377:36:5:89.47:0:0.00:5
X	154307017	gridss304_19h	A	]X:154306942]A	143.09	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=53.63;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-232;BEIDH=0;BEIDL=2;BQ=40.00;BSC=1;BSCQ=40.00;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-4,5;CIRPOS=-25,25;CQ=143.09;EVENT=gridss304_19;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_19o;RAS=1;RASQ=53.63;REF=368;REFPAIR=21;RP=5;RPQ=89.47;SB=0.0;SC=1X8N1X170M17D130M;SR=0;SRQ=0.00;SVTYPE=BND;VF=5	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:3:53.63:0:0.00:0.00:0:0:40.00:1:40.00:0:0.00:1:0.00:0:0.00:143.09:53.63:368:21:5:89.47:0:0.00:5
X	154307057	gridss304_20o	T	T[X:154307168[	70.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.37;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-233;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-42,42;CIRPOS=-42,42;CQ=106.75;EVENT=gridss304_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_20h;RAS=0;RASQ=0.00;REF=258;REFPAIR=20;RP=1;RPQ=17.54;SC=100M1X83N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.37:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:70.91:0.00:258:20:1:17.54:0:0.00:3
X	154307168	gridss304_20h	G	]X:154307057]G	70.91	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-233;BEIDH=0;BEIDL=2;BQ=80.85;BSC=4;BSCQ=80.85;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-42,42;CIRPOS=-42,42;CQ=106.75;EVENT=gridss304_20;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_20o;RAS=1;RASQ=53.37;REF=236;REFPAIR=35;RP=1;RPQ=17.54;SB=1.0;SC=1X83N1X147M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:0:0.00:0:0.00:0.00:0:0:80.85:4:80.85:0:0.00:4:0.00:0:0.00:70.91:53.37:236:35:1:17.54:0:0.00:3
X	154308751	gridss254_164h	A	A[17:41343284[	87.80	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=64.07;ASRP=0;ASSR=3;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-158;BEIDH=93;BEIDL=0;BQ=85.58;BSC=4;BSCQ=85.58;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-7,0;CIRPOS=-7,0;CQ=64.07;EVENT=gridss254_164;HOMLEN=7;HOMSEQ=AAAAAAA;IC=0;IHOMPOS=-7,0;IQ=0.00;PARID=gridss254_164o;RAS=0;RASQ=0.00;REF=206;REFPAIR=28;RP=0;RPQ=0.00;SB=0.75;SC=85M1X6N1X;SR=1;SRQ=23.74;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:64.07:0:3:0:0.00:0:0.00:0.00:0:0:85.58:4:85.58:0:0.00:2:0.00:0:0.00:87.80:0.00:206:28:0:0.00:1:23.74:3
X	154313949	gridss304_28o	G	G[X:154314010[	71.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-832;BEIDH=182;BEIDL=0;BQ=48.74;BSC=2;BSCQ=48.74;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-18,19;CIRPOS=-2,2;CQ=71.17;EVENT=gridss304_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_28h;RAS=1;RASQ=0.00;REF=267;REFPAIR=26;RP=4;RPQ=71.17;SB=0.5;SC=101M10D181M1X36N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:48.74:2:48.74:0:0.00:2:0.00:0:0.00:71.17:0.00:267:26:4:71.17:0:0.00:4
X	154314010	gridss304_28h	C	]X:154313949]C	71.17	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-832;BEIDH=0;BEIDL=182;BQ=18.31;BSC=1;BSCQ=18.31;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-2,2;CIRPOS=-18,19;CQ=71.17;EVENT=gridss304_28;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_28o;RAS=0;RASQ=0.00;REF=249;REFPAIR=29;RP=4;RPQ=71.17;SB=1.0;SC=1X3N1X97M30D195M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:18.31:1:18.31:0:0.00:1:0.00:0:0.00:71.17:0.00:249:29:4:71.17:0:0.00:4
X	154319087	gridss304_33o	A	A[X:154319129[	53.02	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=56.67;BSC=3;BSCQ=56.67;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-12,13;CQ=53.02;EVENT=gridss304_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_33h;RAS=0;RASQ=0.00;REF=383;REFPAIR=21;RP=3;RPQ=53.02;SB=1.0;SC=167M20D100M1X38N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:56.67:3:56.67:0:0.00:3:0.00:0:0.00:53.02:0.00:383:21:3:53.02:0:0.00:3
X	154319129	gridss304_33h	G	]X:154319087]G	53.02	LOW_QUAL;NO_ASSEMBLY	AS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=39.06;BSC=2;BSCQ=39.06;BUM=0;BUMQ=0.00;BVF=2;CAS=0;CASQ=0.00;CIPOS=-12,13;CIRPOS=-19,20;CQ=53.02;EVENT=gridss304_33;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_33o;RAS=0;RASQ=0.00;REF=450;REFPAIR=34;RP=3;RPQ=53.02;SB=0.5;SC=1X24N1X145M55D101M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:39.06:2:39.06:0:0.00:2:0.00:0:0.00:53.02:0.00:450:34:3:53.02:0:0.00:3
X	154344526	gridss304_43o	G	G[X:154344670[	107.50	LOW_QUAL;SINGLE_ASSEMBLY	AS=1;ASQ=53.75;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-484;BEIDH=2;BEIDL=0;BQ=68.56;BSC=3;BSCQ=68.56;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-53,53;CIRPOS=-53,53;CQ=107.50;EVENT=gridss304_43;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_43h;RAS=0;RASQ=0.00;REF=135;REFPAIR=11;RP=3;RPQ=53.75;SB=0.6666667;SC=220M1X105N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:53.75:3:0:0:0.00:0:0.00:0.00:0:0:68.56:3:68.56:0:0.00:3:0.00:0:0.00:107.50:0.00:135:11:3:53.75:0:0.00:3
X	154344670	gridss304_43h	T	]X:154344526]T	107.50	LOW_QUAL;SINGLE_ASSEMBLY	AS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=53.75;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-484;BEIDH=0;BEIDL=2;BQ=79.07;BSC=4;BSCQ=79.07;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CIPOS=-53,53;CIRPOS=-53,53;CQ=107.50;EVENT=gridss304_43;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_43o;RAS=1;RASQ=53.75;REF=236;REFPAIR=19;RP=3;RPQ=53.75;SB=1.0;SC=1X105N1X170M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3	GT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF	.:0.00:3:0:3:53.75:0:0.00:0.00:0:0:79.07:4:79.07:0:0.00:4:0.00:0:0.00:107.50:53.75:236:19:3:53.75:0:0.00:3


================================================
FILE: tests/AnnotSV/test_18_VCFwithBrackets/input/triplesvmerge.vcf
================================================
##fileformat=VCFv4.2
##FILTER=<ID=gridss_ASSEMBLY_ONLY,Description="Variant is supported only by assembly evidence.">
##FILTER=<ID=svaba_TOOSHORT,Description="Contig alignment for part of this rearrangement has <= 25bp match to reference">
##INFO=<ID=brass_BAS,Number=.,Type=Integer,Description="Brass Assembly Score:A maximum score of 100 indicates a perfect pattern of 5 vertices in Velvet's de Bruijn graph">
##INFO=<ID=NumCallers,Number=1,Type=Integer,Description="Number of callers that made this call">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the structural variant">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=1,Type=String,Description="Length of structural variant">
##INFO=<ID=STRANDS,Number=1,Type=String,Description="Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample1	sample2
1	11099650	.	N	N[1:11101794[	.	LOWSUPPORT	END=11101794;Callers=brass;NumCallers=1;CHR2=1;SVTYPE=DEL;SVLEN=2144;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=24_1;brass_BKDIST=2143;brass_FFV=460;brass_OCC=1;brass_SID=MASP2;brass_GENE=MASP2;brass_TID=ENST00000400897;brass_AS=-1;brass_EPH=1;brass_RGN=intron;brass_RGNNO=6;brass_RGNC=11;brass_TSRDS=A00227:74:HCWC7DSXX:1:1127:3450:30765,A00227:74:HCWC7DSXX:1:1323:18222:29794,A00333:42:HCKYCDSXX:3:2629:17987:3709,A00333:42:HCKYCDSXX:4:2340:30689:21605;brass_PH=1	brass_PS:brass_RC	0:0	4:0
1	16595853	.	N	N[1:16596268[	.	LOWSUPPORT	END=16596268;Callers=svaba;NumCallers=1;CHR2=1;SVTYPE=DEL;SVLEN=415;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=14312:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_1_16586501_16611501_18C;svaba_MATENM=0;svaba_SPAN=415;svaba_HOMSEQ=CCTCGGCCTCCCAAAGTGCTGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.52:0:0:0,11.4,125.4:11.4:0:0:41	14.98:0:5:0,14.7,310.2:14.7:5:7.804:112
1	23224424	.	N	N]6:91004428]	.	PASS	END=91004428;Callers=svaba,gridss,brass;NumCallers=3;CHR2=6;SVTYPE=TRA;STRANDS=++;gridss_REF=107;gridss_ASQ=1533.34;gridss_ASRP=86;gridss_ASSR=102;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=307.55;gridss_BSC=12;gridss_BSCQ=183.31;gridss_BUM=4;gridss_BUMQ=124.24;gridss_BVF=4;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1468.82;gridss_REFPAIR=64;gridss_RP=45;gridss_RPQ=730.26;gridss_SR=41;gridss_SRQ=652.22;gridss_VF=79;gridss_AS=2;gridss_BA=0;gridss_BEID=asm115-49150,asm115-49200,asm2-42748;gridss_BEIDH=318,2,0;gridss_BEIDL=0,0,319;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=-1,0;gridss_CQ=4352.29;gridss_EVENT=gridss2_5411;gridss_HOMLEN=1;gridss_HOMSEQ=G;gridss_IHOMPOS=0,1;gridss_PARID=gridss2_5411o;gridss_RAS=1;gridss_SB=0.483871;gridss_SC=606M2X;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=617027:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=1:23224497(+)-6:91004500(+)__6_90993001_91018001D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD;brass_SVCLASS=translocation;brass_MATEID=44_1;brass_BKDIST=-1;brass_FFV=200;brass_OCC=1;brass_SID=BACH2;brass_GENE=BACH2;brass_TID=ENST00000537989;brass_AS=-1;brass_EPH=1;brass_RGN=5UTRintron;brass_RGNNO=1;brass_RGNC=7;brass_TSRDS=A00227:74:HCWC7DSXX:1:1112:18747:19993,A00227:74:HCWC7DSXX:1:1122:24740:1031,A00227:74:HCWC7DSXX:1:1137:23231:35462,A00227:74:HCWC7DSXX:1:1163:16694:6292,A00227:74:HCWC7DSXX:1:1178:30590:15922,A00227:74:HCWC7DSXX:1:1218:15908:12164,A00227:74:HCWC7DSXX:1:1237:21197:17722,A00227:74:HCWC7DSXX:1:1252:29179:13291,A00227:74:HCWC7DSXX:1:1301:14118:27759,A00227:74:HCWC7DSXX:1:1304:8467:22169,A00227:74:HCWC7DSXX:1:1324:20085:21089,A00227:74:HCWC7DSXX:1:1371:27697:34272,A00227:74:HCWC7DSXX:1:2101:13919:28260,A00227:74:HCWC7DSXX:1:2106:11044:2581,A00227:74:HCWC7DSXX:1:2121:11026:21684,A00227:74:HCWC7DSXX:1:2232:15365:14857,A00227:74:HCWC7DSXX:1:2470:17933:1799,A00227:74:HCWC7DSXX:1:2502:5213:17942,A00227:74:HCWC7DSXX:1:2533:10474:22169,A00227:74:HCWC7DSXX:1:2613:26422:18035,A00227:74:HCWC7DSXX:1:2622:22661:14716,A00227:74:HCWC7DSXX:1:2644:31476:21684,A00227:74:HCWC7DSXX:1:2675:30553:1329,A00333:42:HCKYCDSXX:3:1148:21414:2566,A00333:42:HCKYCDSXX:3:1173:3314:30185,A00333:42:HCKYCDSXX:3:1510:25626:8453,A00333:42:HCKYCDSXX:3:1525:21224:4805,A00333:42:HCKYCDSXX:3:1627:14968:32800,A00333:42:HCKYCDSXX:3:2108:17363:3912,A00333:42:HCKYCDSXX:3:2146:28646:9017,A00333:42:HCKYCDSXX:3:2252:3378:27946,A00333:42:HCKYCDSXX:3:2453:5122:15436,A00333:42:HCKYCDSXX:3:2472:29441:25238,A00333:42:HCKYCDSXX:3:2525:15890:5776,A00333:42:HCKYCDSXX:3:2542:1515:14325,A00333:42:HCKYCDSXX:4:1118:11722:3599,A00333:42:HCKYCDSXX:4:1220:15781:6214,A00333:42:HCKYCDSXX:4:1303:1407:22247,A00333:42:HCKYCDSXX:4:1321:20383:36385,A00333:42:HCKYCDSXX:4:1402:8214:24862,A00333:42:HCKYCDSXX:4:1518:31042:21527,A00333:42:HCKYCDSXX:4:1544:6054:2550,A00333:42:HCKYCDSXX:4:1614:26702:18082,A00333:42:HCKYCDSXX:4:2462:27742:8234,A00333:42:HCKYCDSXX:4:2672:21386:31892	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	43:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:36:0:0:0:0:0:5.341:0:0:0,5.1,56.1:5.1:0:0:19:0:0	64:1533.34:86:102:0:0:0:0:0:0:0:280.06:12:183.31:3:96.75:3:0:0:0:4384.64:1468.82:28:45:730.26:41:652.22:79:-132:43:0:132,12,0:12:43:132:34:45:0
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1	26678684	.	N	N]5:92736820]	.	PASS	END=92736820;Callers=svaba,gridss,brass;NumCallers=3;CHR2=5;SVTYPE=TRA;STRANDS=++;gridss_REF=113;gridss_ASQ=1256.08;gridss_ASRP=65;gridss_ASSR=88;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=161.18;gridss_BSC=11;gridss_BSCQ=161.18;gridss_BUM=0;gridss_BUMQ=0;gridss_BVF=0;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1181.15;gridss_REFPAIR=57;gridss_RP=35;gridss_RPQ=567.98;gridss_SR=35;gridss_SRQ=559.38;gridss_VF=66;gridss_AS=1;gridss_BA=0;gridss_BEID=asm2-83946,asm97-57110;gridss_BEIDH=0,406;gridss_BEIDL=407,0;gridss_CAS=0;gridss_CQ=3532.53;gridss_EVENT=gridss2_10472;gridss_IHOMPOS=0,0;gridss_PARID=gridss2_10472o;gridss_RAS=1;gridss_SB=0.447761;gridss_SC=404M1X;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=518027:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=1:26678736(+)-5:92736896(+)__5_92732501_92757501D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD;brass_BAS=95;brass_SVCLASS=translocation;brass_MATEID=53_1;brass_BKDIST=-1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1139:32117:18881,A00227:74:HCWC7DSXX:1:1150:1271:18944,A00227:74:HCWC7DSXX:1:1229:7916:35462,A00227:74:HCWC7DSXX:1:1237:29134:13902,A00227:74:HCWC7DSXX:1:1306:27172:23375,A00227:74:HCWC7DSXX:1:1343:8024:19899,A00227:74:HCWC7DSXX:1:1456:1506:33599,A00227:74:HCWC7DSXX:1:1635:32452:27727,A00227:74:HCWC7DSXX:1:2119:19913:25144,A00227:74:HCWC7DSXX:1:2161:25825:2879,A00227:74:HCWC7DSXX:1:2166:30129:31156,A00227:74:HCWC7DSXX:1:2204:29432:2644,A00227:74:HCWC7DSXX:1:2236:21829:3850,A00227:74:HCWC7DSXX:1:2303:17571:9565,A00227:74:HCWC7DSXX:1:2329:15483:28401,A00227:74:HCWC7DSXX:1:2377:24849:21887,A00227:74:HCWC7DSXX:1:2434:32750:1971,A00227:74:HCWC7DSXX:1:2569:25048:14716,A00227:74:HCWC7DSXX:1:2619:23755:36652,A00333:42:HCKYCDSXX:3:1217:32307:14794,A00333:42:HCKYCDSXX:3:1218:12020:32925,A00333:42:HCKYCDSXX:3:1243:8404:35618,A00333:42:HCKYCDSXX:3:1251:8458:34428,A00333:42:HCKYCDSXX:3:1457:31141:31344,A00333:42:HCKYCDSXX:3:2335:29134:14278,A00333:42:HCKYCDSXX:4:1149:12680:34381,A00333:42:HCKYCDSXX:4:1424:13141:20087,A00333:42:HCKYCDSXX:4:1602:9833:34460,A00333:42:HCKYCDSXX:4:2115:16034:4085,A00333:42:HCKYCDSXX:4:2138:15591:14215,A00333:42:HCKYCDSXX:4:2469:10999:34507,A00333:42:HCKYCDSXX:4:2564:6515:30968,A00333:42:HCKYCDSXX:4:2611:28782:3959,A00333:42:HCKYCDSXX:4:2629:26539:4429,A00333:42:HCKYCDSXX:4:2659:5575:22889;brass_TRDS=A00227:74:HCWC7DSXX:1:1555:16034:9345/2,A00227:74:HCWC7DSXX:1:2341:19813:30076/1,A00227:74:HCWC7DSXX:1:1635:32452:27727/2,A00227:74:HCWC7DSXX:1:1436:20166:13620/2,A00227:74:HCWC7DSXX:1:2629:6659:3004/1,A00227:74:HCWC7DSXX:1:1454:27281:17080/2,A00333:42:HCKYCDSXX:3:2456:7853:10175/2,A00333:42:HCKYCDSXX:3:1243:8404:35618/2,A00333:42:HCKYCDSXX:4:1536:11080:19492/1,A00333:42:HCKYCDSXX:3:1243:6885:35900/2,A00227:74:HCWC7DSXX:1:2303:17571:9565/2,A00333:42:HCKYCDSXX:4:1149:12680:34381/2,A00333:42:HCKYCDSXX:4:2564:6515:30968/1,A00227:74:HCWC7DSXX:1:1230:14850:32409/1,A00333:42:HCKYCDSXX:3:1217:31675:15076/2,A00227:74:HCWC7DSXX:1:1237:29134:13902/1,A00333:42:HCKYCDSXX:3:2457:30436:7263/2,A00227:74:HCWC7DSXX:1:2619:23755:36652/1,A00333:42:HCKYCDSXX:3:1251:8458:34428/2,A00227:74:HCWC7DSXX:1:2526:11957:4726/1,A00333:42:HCKYCDSXX:3:2573:24650:17033/1,A00333:42:HCKYCDSXX:3:1652:29758:33833/1,A00227:74:HCWC7DSXX:1:2329:15483:28401/1,A00227:74:HCWC7DSXX:1:2377:24849:21887/1,A00227:74:HCWC7DSXX:1:1554:15555:19163/2,A00227:74:HCWC7DSXX:1:1407:29324:18991/2,A00333:42:HCKYCDSXX:3:2335:29134:14278/1,A00227:74:HCWC7DSXX:1:1555:16107:9439/2,A00333:42:HCKYCDSXX:3:2178:24632:28870/2,A00333:42:HCKYCDSXX:3:1217:32307:14794/2,A00333:42:HCKYCDSXX:3:2457:29405:21136/2,A00333:42:HCKYCDSXX:3:1251:8377:35289/2,A00227:74:HCWC7DSXX:1:2512:10755:4899/1,A00333:42:HCKYCDSXX:3:1455:8829:36886/2,A00227:74:HCWC7DSXX:1:2447:12301:7232/1,A00333:42:HCKYCDSXX:4:1454:24044:23594/2,A00333:42:HCKYCDSXX:4:2621:16740:5525/1,A00333:42:HCKYCDSXX:4:2629:26539:4429/1	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	47:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:29:0:0:0:0:0:6.184:0:0:0,6,66:6:0:0:22:0:0	66:1256.08:65:88:0:0:0:0:0:0:0:161.18:11:161.18:0:0:0:0:0:0:3564.59:1181.15:28:35:567.98:35:559.38:66:-67.8:23:0:66.5,0,17:17:23:67.8:34:35:38
1	31672108	.	N	[6:93930476[N	.	PASS	END=93930476;Callers=svaba,gridss,brass;NumCallers=3;CHR2=6;SVTYPE=TRA;STRANDS=--;gridss_REF=106;gridss_ASQ=1170.11;gridss_ASRP=72;gridss_ASSR=79;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=133.59;gridss_BSC=5;gridss_BSCQ=73.85;gridss_BUM=2;gridss_BUMQ=59.74;gridss_BVF=2;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1261.93;gridss_REFPAIR=51;gridss_RP=38;gridss_RPQ=616.67;gridss_SR=33;gridss_SRQ=528.28;gridss_VF=60;gridss_AS=1;gridss_BA=0;gridss_BEID=asm115-166329,asm3-143799;gridss_BEIDH=0,505;gridss_BEIDL=398,0;gridss_CAS=0;gridss_CQ=3576.98;gridss_EVENT=gridss3_61103;gridss_IHOMPOS=0,0;gridss_PARID=gridss3_61103o;gridss_RAS=1;gridss_SB=0.504274;gridss_SC=1X504M;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=618215:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_6_93908501_93933501_0C;svaba_MATENM=2;svaba_SPAN=-1;svaba_EVDNC=ASDIS;brass_BAS=93;brass_SVCLASS=translocation;brass_MATEID=59_1;brass_BKDIST=-1;brass_SID=NKAIN1;brass_GENE=NKAIN1;brass_TID=ENST00000373736;brass_AS=-1;brass_RGN=intron;brass_RGNNO=1;brass_RGNC=7;brass_TSRDS=A00227:74:HCWC7DSXX:1:1104:26467:7404,A00227:74:HCWC7DSXX:1:1113:19253:12446,A00227:74:HCWC7DSXX:1:1120:16161:17738,A00227:74:HCWC7DSXX:1:1132:19045:24987,A00227:74:HCWC7DSXX:1:1172:11930:9940,A00227:74:HCWC7DSXX:1:1376:4047:15358,A00227:74:HCWC7DSXX:1:1411:21630:17973,A00227:74:HCWC7DSXX:1:1414:24813:14685,A00227:74:HCWC7DSXX:1:1448:2230:34569,A00227:74:HCWC7DSXX:1:1568:13259:22044,A00227:74:HCWC7DSXX:1:1614:12500:24424,A00227:74:HCWC7DSXX:1:1614:31078:1078,A00227:74:HCWC7DSXX:1:1648:30481:26819,A00227:74:HCWC7DSXX:1:1652:17544:9674,A00227:74:HCWC7DSXX:1:2221:1741:11616,A00227:74:HCWC7DSXX:1:2274:15347:22341,A00227:74:HCWC7DSXX:1:2277:10502:21277,A00227:74:HCWC7DSXX:1:2303:29993:5588,A00227:74:HCWC7DSXX:1:2345:6605:11898,A00227:74:HCWC7DSXX:1:2359:7898:36276,A00227:74:HCWC7DSXX:1:2413:21386:25629,A00227:74:HCWC7DSXX:1:2536:19461:7451,A00333:42:HCKYCDSXX:3:1102:18439:1642,A00333:42:HCKYCDSXX:3:1117:7139:8281,A00333:42:HCKYCDSXX:3:1222:30996:4131,A00333:42:HCKYCDSXX:3:1361:14244:34084,A00333:42:HCKYCDSXX:3:1636:31277:2487,A00333:42:HCKYCDSXX:3:2110:1570:20181,A00333:42:HCKYCDSXX:3:2374:2519:30624,A00333:42:HCKYCDSXX:3:2567:6659:14309,A00333:42:HCKYCDSXX:3:2664:24279:18145,A00333:42:HCKYCDSXX:4:1107:13223:7545,A00333:42:HCKYCDSXX:4:1117:7102:5118,A00333:42:HCKYCDSXX:4:1171:16776:20713,A00333:42:HCKYCDSXX:4:1252:11785:1204,A00333:42:HCKYCDSXX:4:1258:8811:33066,A00333:42:HCKYCDSXX:4:2172:26368:22232,A00333:42:HCKYCDSXX:4:2350:24614:34068,A00333:42:HCKYCDSXX:4:2374:23086:6840;brass_TRDS=A00227:74:HCWC7DSXX:1:2228:7355:9095/2,A00227:74:HCWC7DSXX:1:2324:29270:3615/1,A00227:74:HCWC7DSXX:1:1614:12500:24424/2,A00227:74:HCWC7DSXX:1:2303:29993:5588/1,A00227:74:HCWC7DSXX:1:1125:32434:6684/1,A00227:74:HCWC7DSXX:1:1415:24487:19914/2,A00333:42:HCKYCDSXX:3:1361:14244:34084/1,A00333:42:HCKYCDSXX:3:2374:2519:30624/1,A00227:74:HCWC7DSXX:1:1473:16052:8406/1,A00227:74:HCWC7DSXX:1:1405:8232:35227/2,A00333:42:HCKYCDSXX:3:2110:1570:20181/2,A00333:42:HCKYCDSXX:3:1345:1099:16391/2,A00227:74:HCWC7DSXX:1:1412:4336:26443/2,A00333:42:HCKYCDSXX:3:1102:18439:1642/2,A00227:74:HCWC7DSXX:1:1405:8549:28792/2,A00227:74:HCWC7DSXX:1:1113:19253:12446/1,A00227:74:HCWC7DSXX:1:2225:11080:28228/1,A00333:42:HCKYCDSXX:4:1171:16776:20713/1,A00333:42:HCKYCDSXX:3:1222:30996:4131/2,A00333:42:HCKYCDSXX:3:2636:26341:13166/1,A00227:74:HCWC7DSXX:1:1414:26594:27101/1,A00333:42:HCKYCDSXX:3:1572:8865:2065/1,A00227:74:HCWC7DSXX:1:2345:6605:11898/2,A00227:74:HCWC7DSXX:1:1411:21630:17973/1	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	30:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:28:0:0:0:0:0:4.216:0:0:0,4.2,46.2:4.2:0:0:15:0:0	76:1170.11:72:79:0:0:0:0:0:0:0:106.1:5:73.85:1:32.25:1:0:0:0:3576.98:1261.93:23:38:616.67:33:528.28:60:-171.6:23:41:171.6,15.6,0:15.6:56:171.6:50:39:24
1	39370828	.	N	N[1:39371160[	.	LOWSUPPORT	END=39371160;Callers=svaba;NumCallers=1;CHR2=1;SVTYPE=DEL;SVLEN=332;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=27993:1;svaba_MAPQ=60;svaba_NM=2;svaba_SCTG=c_1_39347001_39372001_5C;svaba_MATENM=0;svaba_SPAN=332;svaba_SUBN=4;svaba_HOMSEQ=GCCTGTAATCTCAGCACTTTGGGAGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	13.49:0:0:0,13.2,145.2:13.2:0:0:48	13.29:0:5:0,12.9,290.4:12.9:5:7.926:106
1	46217247	.	N	N[1:46217487[	.	LOWSUPPORT	END=46217487;Callers=svaba;NumCallers=1;CHR2=1;SVTYPE=DEL;SVLEN=240;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=32037:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_1_46207001_46232001_30C;svaba_MATENM=1;svaba_SPAN=240;svaba_HOMSEQ=GTGATCCGCCCGACTCGGCCTCCCAAAGTG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	13.21:0:0:0,12.9,141.9:12.9:0:0:47	20.25:0:4:0,20.1,339.9:20.1:4:5.746:119
1	54924495	.	N	]1:54924872]N	.	LOWSUPPORT	END=54924872;Callers=svaba;NumCallers=1;CHR2=1;SVTYPE=DUP;SVLEN=377;STRANDS=-+;svaba_DISC_MAPQ=18;svaba_NUMPARTS=0;svaba_MATEID=36248:1;svaba_MAPQ=18;svaba_NM=-1;svaba_SCTG=1:54924495(-)-1:54924872(+)__1_54904501_54929501D;svaba_MATENM=-1;svaba_SPAN=377;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.308:0:0:0,7.2,79.2:7.2:0:0:26	-10.59:9:0:10.7,0,159.2:10.7:9:18.47:68
1	71447029	.	N	]6:157943851]N	.	LOWSUPPORT	END=157943851;Callers=svaba;NumCallers=1;CHR2=6;SVTYPE=TRA;STRANDS=-+;svaba_DISC_MAPQ=60;svaba_NUMPARTS=3;svaba_MATEID=648137:1;svaba_MAPQ=60;svaba_NM=5;svaba_SCTG=c_6_157927001_157952001_28C;svaba_REPSEQ=CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT;svaba_MATENM=0;svaba_SPAN=-1;svaba_EVDNC=TSI_L	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	1.968:0:0:0,1.6,8.2:1.6:0:0:7	-1.649:4:5:2,0,11.7:2:5:2.538:19
1	91561229	.	N	]1:93514434]N	.	LOWSUPPORT	END=93514434;Callers=svaba;NumCallers=1;CHR2=1;SVTYPE=DUP;SVLEN=1953205;STRANDS=-+;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=54388:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=1:91561229(-)-1:93514434(+)__1_91556501_91581501D;svaba_MATENM=-1;svaba_SPAN=1953205;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	5.622:0:0:0,5.4,59.4:5.4:0:0:20	-21.34:12:0:21.5,0,140.3:21.5:12:26.51:65
1	100320084	.	N	N[1:100320508[	.	LOWSUPPORT	END=100320508;Callers=svaba;NumCallers=1;CHR2=1;SVTYPE=DEL;SVLEN=424;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=59011:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_1_100303001_100328001_44C;svaba_MATENM=0;svaba_SPAN=424;svaba_HOMSEQ=GCACTTTGGGAGGCC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.52:0:0:0,11.4,125.4:11.4:0:0:41	23.9:0:4:0,23.7,379.5:23.7:4:5.565:132
1	156961400	.	N	N[1:156961774[	.	LOWSUPPORT	END=156961774;Callers=svaba;NumCallers=1;CHR2=1;SVTYPE=DEL;SVLEN=374;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=84091:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_1_156947001_156972001_111C;svaba_MATENM=0;svaba_SPAN=374;svaba_HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	13.49:0:0:0,13.2,145.2:13.2:0:0:48	34.86:0:4:0,34.6,498.4:34.6:4:5.117:171
1	161393039	.	N	]1:161393413]N	.	LOWSUPPORT	END=161393413;Callers=svaba;NumCallers=1;CHR2=1;SVTYPE=DUP;SVLEN=374;STRANDS=-+;svaba_DISC_MAPQ=23;svaba_NUMPARTS=0;svaba_MATEID=86227:1;svaba_MAPQ=23;svaba_NM=-1;svaba_SCTG=1:161393039(-)-1:161393413(+)__1_161381501_161406501D;svaba_MATENM=-1;svaba_SPAN=374;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	14.9:0:0:0,14.7,161.7:14.7:0:0:53	17.8:9:0:0,17.5,458.8:17.5:9:14.75:169
1	224480723	.	N	N[1:224481015[	.	LOWSUPPORT	END=224481015;Callers=svaba;NumCallers=1;CHR2=1;SVTYPE=DEL;SVLEN=292;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=119879:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_1_224469001_224494001_99C;svaba_MATENM=0;svaba_SPAN=292;svaba_HOMSEQ=CCCGCCTCGGCCTCCCAAAGTGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.09:0:0:0,12,132:12:0:0:43	21.37:0:4:0,21,349.8:21:4:5.688:123
1	230530767	.	N	]1:230531602]N	.	LOWSUPPORT	END=230531602;Callers=svaba;NumCallers=1;CHR2=1;SVTYPE=DUP;SVLEN=835;STRANDS=-+;svaba_DISC_MAPQ=16;svaba_NUMPARTS=0;svaba_MATEID=123236:1;svaba_MAPQ=16;svaba_NM=-1;svaba_SCTG=1:230530767(-)-1:230531602(+)__1_230520501_230545501D;svaba_MATENM=-1;svaba_SPAN=835;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.59:0:0:0,7.5,82.5:7.5:0:0:27	-10.67:8:0:10.7,0,129.5:10.7:8:16.7:56
2	47930145	.	N	N[2:47930512[	.	LOWSUPPORT	END=47930512;Callers=svaba;NumCallers=1;CHR2=2;SVTYPE=DEL;SVLEN=367;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=161762:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_2_47922001_47947001_72C;svaba_MATENM=0;svaba_SPAN=367;svaba_HOMSEQ=TGCCACTGCACTCCAGCCTGGGCAACAGAG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.93:0:0:0,12.6,138.6:12.6:0:0:46	16.31:0:4:0,16.2,297:16.2:4:5.965:105
2	68569410	.	N	]2:68569528]N	.	LOWSUPPORT	END=68569528;Callers=gridss;NumCallers=1;CHR2=2;SVTYPE=DUP;SVLEN=118;STRANDS=-+;gridss_REF=169;gridss_ASQ=520.58;gridss_ASRP=0;gridss_ASSR=72;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=103.27;gridss_BSC=3;gridss_BSCQ=43.52;gridss_BUM=2;gridss_BUMQ=59.74;gridss_BVF=2;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=608.93;gridss_REFPAIR=68;gridss_RP=0;gridss_RPQ=0;gridss_SR=30;gridss_SRQ=477.05;gridss_VF=42;gridss_AS=1;gridss_BA=0;gridss_BEID=asm31-224126,asm31-99507;gridss_BEIDH=120,271;gridss_BEIDL=0,0;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=0,1;gridss_CQ=1606.56;gridss_EVENT=gridss31_54750;gridss_HOMLEN=1;gridss_HOMSEQ=T;gridss_IHOMPOS=0,1;gridss_PARID=gridss31_54750o;gridss_RAS=1;gridss_SB=0.485714;gridss_SC=269M2X	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF	58:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:25:0:0:0:0:0	111:520.58:0:72:0:0:0:0:0:0:0:75.77:3:43.52:1:32.25:1:0:0:0:1606.56:608.93:43:0:0:30:477.05:42
2	152243856	.	N	N[2:152244152[	.	LOWSUPPORT	END=152244152;Callers=svaba;NumCallers=1;CHR2=2;SVTYPE=DEL;SVLEN=296;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=215147:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_2_152243001_152268001_23C;svaba_MATENM=0;svaba_SPAN=296;svaba_HOMSEQ=GGATTACAGGTATGAGCCACTGCGCCTGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.24:0:0:0,11.1,122.1:11.1:0:0:40	18.63:0:5:0,18.3,349.8:18.3:5:7.563:125
2	222231429	.	N	N[2:222232501[	.	LOWSUPPORT	END=222232501;Callers=brass;NumCallers=1;CHR2=2;SVTYPE=DEL;SVLEN=1072;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=444_1;brass_BKDIST=1071;brass_OCC=1;brass_TSRDS=A00227:74:HCWC7DSXX:1:2345:29188:23829,A00333:42:HCKYCDSXX:3:1636:4896:7842,A00333:42:HCKYCDSXX:3:2373:26946:21042,A00333:42:HCKYCDSXX:4:1515:3079:13119	brass_PS:brass_RC	0:0	4:0
2	225292979	.	N	N]2:225293201]	.	LOWSUPPORT	END=225293201;Callers=svaba;NumCallers=1;CHR2=2;SVTYPE=INV;SVLEN=222;STRANDS=++;svaba_DISC_MAPQ=59;svaba_NUMPARTS=0;svaba_MATEID=252513:1;svaba_MAPQ=59;svaba_NM=-1;svaba_SCTG=2:225292979(+)-2:225293201(+)__2_225277501_225302501D;svaba_MATENM=-1;svaba_SPAN=222;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	8.433:0:0:0,8.4,92.4:8.4:0:0:30	-19.37:12:0:19.4,0,161.3:19.4:12:25.93:72
2	233573364	.	N	N[2:233573631[	.	LOWSUPPORT	END=233573631;Callers=svaba;NumCallers=1;CHR2=2;SVTYPE=DEL;SVLEN=267;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=257377:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_2_233558501_233583501_46C;svaba_MATENM=0;svaba_SPAN=267;svaba_HOMSEQ=GACCAGCCTGGGCAACATGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	9.557:0:0:0,9.3,102.3:9.3:0:0:34	12.73:0:5:0,12.6,287.1:12.6:5:7.968:104
2	235208209	.	N	N[2:236533502[	.	PASS	END=236533502;Callers=svaba,gridss,brass;NumCallers=3;CHR2=2;SVTYPE=DEL;SVLEN=1325293;STRANDS=+-;gridss_REF=112;gridss_ASQ=780.01;gridss_ASRP=50;gridss_ASSR=35;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=258.71;gridss_BSC=11;gridss_BSCQ=166.72;gridss_BUM=3;gridss_BUMQ=91.99;gridss_BVF=1;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=610.22;gridss_REFPAIR=68;gridss_RP=25;gridss_RPQ=405.7;gridss_SR=12;gridss_SRQ=189.92;gridss_VF=39;gridss_AS=1;gridss_BA=0;gridss_BEID=asm48-196947,asm48-60110;gridss_BEIDH=0,0;gridss_BEIDL=295,429;gridss_CAS=0;gridss_CIPOS=0,2;gridss_CIRPOS=0,2;gridss_CQ=1969.63;gridss_EVENT=gridss48_25619;gridss_HOMLEN=2;gridss_HOMSEQ=TC;gridss_IHOMPOS=0,2;gridss_PARID=gridss48_25619o;gridss_RAS=1;gridss_SB=0.362069;gridss_SC=1X1N1X462M;svaba_NUMPARTS=2;svaba_MATEID=259519:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_2_236523001_236548001_70C;svaba_MATENM=0;svaba_SPAN=1325293;svaba_HOMSEQ=TC;svaba_EVDNC=ASSMB;brass_BAS=75;brass_SVCLASS=deletion;brass_MATEID=452_1;brass_HOMSEQ=TC;brass_IMPRECISE;brass_CIPOS=0,2;brass_CIEND=0,2;brass_HOMLEN=2;brass_BKDIST=1325292;brass_TSRDS=A00227:74:HCWC7DSXX:1:1348:11623:7216,A00227:74:HCWC7DSXX:1:1427:18954:36010,A00227:74:HCWC7DSXX:1:1468:11026:26882,A00227:74:HCWC7DSXX:1:1477:26295:1939,A00227:74:HCWC7DSXX:1:1506:29478:22106,A00227:74:HCWC7DSXX:1:1517:27543:19727,A00227:74:HCWC7DSXX:1:1533:28420:10285,A00227:74:HCWC7DSXX:1:1567:30129:35540,A00227:74:HCWC7DSXX:1:2132:27651:14027,A00227:74:HCWC7DSXX:1:2308:10719:24784,A00227:74:HCWC7DSXX:1:2405:4978:7764,A00227:74:HCWC7DSXX:1:2451:30960:26303,A00227:74:HCWC7DSXX:1:2569:29243:34632,A00227:74:HCWC7DSXX:1:2613:25093:5462,A00227:74:HCWC7DSXX:1:2631:22101:32972,A00333:42:HCKYCDSXX:3:1144:17219:12837,A00333:42:HCKYCDSXX:3:1248:20961:17472,A00333:42:HCKYCDSXX:3:1626:19985:37012,A00333:42:HCKYCDSXX:3:2215:8178:23547,A00333:42:HCKYCDSXX:3:2358:8666:20979,A00333:42:HCKYCDSXX:3:2458:30174:2487,A00333:42:HCKYCDSXX:3:2668:29541:13604,A00333:42:HCKYCDSXX:4:1159:16785:24048,A00333:42:HCKYCDSXX:4:1443:25979:34366,A00333:42:HCKYCDSXX:4:1574:17716:5055,A00333:42:HCKYCDSXX:4:1646:23556:26569,A00333:42:HCKYCDSXX:4:2320:13720:8061;brass_TRDS=A00227:74:HCWC7DSXX:1:1401:14371:20118/1,A00227:74:HCWC7DSXX:1:1255:10059:20635/1,A00227:74:HCWC7DSXX:1:1256:13783:19507/1,A00227:74:HCWC7DSXX:1:1237:21856:7717/2,A00227:74:HCWC7DSXX:1:2451:30960:26303/1,A00227:74:HCWC7DSXX:1:2520:30915:35775/2,A00333:42:HCKYCDSXX:4:2145:15736:25739/1,A00333:42:HCKYCDSXX:4:1159:16785:24048/2,A00227:74:HCWC7DSXX:1:1533:28420:10285/2,A00227:74:HCWC7DSXX:1:2306:20555:27258/2,A00333:42:HCKYCDSXX:3:2215:8178:23547/1,A00333:42:HCKYCDSXX:3:2232:14516:7780/1,A00227:74:HCWC7DSXX:1:1477:26295:1939/1,A00227:74:HCWC7DSXX:1:1401:2184:22185/2,A00227:74:HCWC7DSXX:1:2308:10719:24784/2,A00227:74:HCWC7DSXX:1:1237:22381:5556/2;brass_SID=AGAP1;brass_GENE=AGAP1;brass_TID=ENST00000304032;brass_AS=1;brass_PH=1;brass_RGN=intron;brass_RGNNO=1;brass_RGNC=18	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	33:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:33:0:0:0:0:0:4.498:0:0:0,4.2,46.2:4.2:0:0:16:0:0	79:780.01:50:35:0:0:0:0:0:0:0:231.21:11:166.72:2:64.5:0:0:0:0:1985.86:610.22:35:25:405.7:12:189.92:39:-62.73:0:23:62.9,0,53:53:23:62.73:47:27:16
2	236395069	.	N	[2:240190022[N	.	PASS	END=240190022;Callers=svaba,gridss,brass;NumCallers=3;CHR2=2;SVTYPE=INV;SVLEN=3794953;STRANDS=--;gridss_REF=169;gridss_ASQ=843.22;gridss_ASRP=52;gridss_ASSR=54;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=106.03;gridss_BSC=5;gridss_BSCQ=73.78;gridss_BUM=1;gridss_BUMQ=32.25;gridss_BVF=1;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=845.8;gridss_REFPAIR=85;gridss_RP=29;gridss_RPQ=470.61;gridss_SR=23;gridss_SRQ=363.74;gridss_VF=44;gridss_AS=1;gridss_BA=0;gridss_BEID=asm48-194918,asm48-238848;gridss_BEIDH=457,0;gridss_BEIDL=0,392;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=-1,0;gridss_CQ=2523.37;gridss_EVENT=gridss48_59879;gridss_HOMLEN=1;gridss_HOMSEQ=G;gridss_IHOMPOS=0,1;gridss_PARID=gridss48_59879o;gridss_RAS=1;gridss_SB=0.5;gridss_SC=2X492M;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=261699:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_2_240173501_240198501_92C;svaba_MATENM=0;svaba_SPAN=3794953;svaba_HOMSEQ=G;svaba_EVDNC=ASDIS;brass_BAS=84;brass_SVCLASS=inversion;brass_MATEID=458_1;brass_HOMSEQ=G;brass_IMPRECISE;brass_CIPOS=0,1;brass_CIEND=1,0;brass_HOMLEN=1;brass_BKDIST=3794951;brass_TSRDS=A00227:74:HCWC7DSXX:1:1328:16767:9048,A00227:74:HCWC7DSXX:1:1510:3351:7326,A00227:74:HCWC7DSXX:1:1565:28881:4257,A00227:74:HCWC7DSXX:1:1650:17626:15201,A00227:74:HCWC7DSXX:1:1661:1018:3850,A00227:74:HCWC7DSXX:1:2213:24153:7185,A00227:74:HCWC7DSXX:1:2274:8079:31673,A00227:74:HCWC7DSXX:1:2362:31882:6324,A00227:74:HCWC7DSXX:1:2413:25762:28479,A00227:74:HCWC7DSXX:1:2458:11641:31955,A00227:74:HCWC7DSXX:1:2564:5466:16752,A00227:74:HCWC7DSXX:1:2571:10402:1313,A00227:74:HCWC7DSXX:1:2650:6289:11788,A00333:42:HCKYCDSXX:3:1308:6849:10535,A00333:42:HCKYCDSXX:3:1369:17508:27430,A00333:42:HCKYCDSXX:3:1549:2419:32863,A00333:42:HCKYCDSXX:3:1568:13901:36746,A00333:42:HCKYCDSXX:3:2140:23981:28275,A00333:42:HCKYCDSXX:3:2209:2645:34538,A00333:42:HCKYCDSXX:3:2239:9507:18458,A00333:42:HCKYCDSXX:3:2315:4969:31203,A00333:42:HCKYCDSXX:3:2367:8919:28150,A00333:42:HCKYCDSXX:4:1143:32615:4178,A00333:42:HCKYCDSXX:4:1212:2302:9079,A00333:42:HCKYCDSXX:4:1315:9851:2268,A00333:42:HCKYCDSXX:4:1376:30255:27868,A00333:42:HCKYCDSXX:4:2649:27335:12289,A00333:42:HCKYCDSXX:4:2651:14452:19914,A00333:42:HCKYCDSXX:4:2661:3803:15468;brass_TRDS=A00333:42:HCKYCDSXX:3:1209:5303:29966/1,A00333:42:HCKYCDSXX:3:2209:2645:34538/1,A00227:74:HCWC7DSXX:1:2213:23592:12101/1,A00227:74:HCWC7DSXX:1:2274:8079:31673/1,A00227:74:HCWC7DSXX:1:2413:25762:28479/1,A00333:42:HCKYCDSXX:4:1321:17689:1031/1,A00333:42:HCKYCDSXX:3:1308:6849:10535/2,A00333:42:HCKYCDSXX:4:1153:26521:4679/2,A00333:42:HCKYCDSXX:4:1212:2302:9079/1,A00333:42:HCKYCDSXX:3:2511:30472:26271/2,A00333:42:HCKYCDSXX:4:1153:26630:4398/2,A00227:74:HCWC7DSXX:1:2213:24153:7185/1,A00333:42:HCKYCDSXX:4:1256:23068:33458/1,A00227:74:HCWC7DSXX:1:1440:5104:18724/2,A00227:74:HCWC7DSXX:1:1328:16767:9048/1,A00333:42:HCKYCDSXX:4:1315:9851:2268/1,A00227:74:HCWC7DSXX:1:2614:14814:34350/1,A00227:74:HCWC7DSXX:1:1461:27968:16016/2;brass_SID=HDAC4;brass_GENE=HDAC4;brass_TID=ENST00000345617;brass_AS=-1;brass_PH=1;brass_RGN=intron;brass_RGNNO=2;brass_RGNC=27	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	57:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:46:0:0:0:0:0:7.59:0:0:0,7.5,82.5:7.5:0:0:27:0:0	112:843.22:52:54:0:0:0:0:0:0:0:106.03:5:73.78:1:32.25:1:0:0:0:2523.37:845.8:39:29:470.61:23:363.74:44:-118.7:22:30:117.2,0,44.6:44.6:41:118.7:65:29:18
2	236436339	.	N	N]2:240091018]	.	PASS	END=240091018;Callers=svaba,gridss,brass;NumCallers=3;CHR2=2;SVTYPE=INV;SVLEN=3654679;STRANDS=++;gridss_REF=186;gridss_ASQ=1247.37;gridss_ASRP=78;gridss_ASSR=70;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=252.09;gridss_BSC=12;gridss_BSCQ=187.59;gridss_BUM=2;gridss_BUMQ=64.5;gridss_BVF=2;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1121.45;gridss_REFPAIR=67;gridss_RP=43;gridss_RPQ=697.81;gridss_SR=28;gridss_SRQ=443.12;gridss_VF=58;gridss_AS=1;gridss_BA=0;gridss_BEID=asm48-115409,asm48-73311;gridss_BEIDH=514,0;gridss_BEIDL=0,531;gridss_CAS=0;gridss_CIPOS=0,2;gridss_CIRPOS=-2,0;gridss_CQ=3509.76;gridss_EVENT=gridss48_8351;gridss_HOMLEN=2;gridss_HOMSEQ=TT;gridss_IHOMPOS=0,2;gridss_PARID=gridss48_8351o;gridss_RAS=1;gridss_SB=0.509091;gridss_SC=530M1X1N1X;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=261659:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=2:236436401(+)-2:240091060(+)__2_240075501_240100501D;svaba_MATENM=-1;svaba_SPAN=3654659;svaba_IMPRECISE;svaba_EVDNC=DSCRD;brass_BAS=94;brass_SVCLASS=inversion;brass_MATEID=456_1;brass_HOMSEQ=TT;brass_IMPRECISE;brass_CIPOS=0,2;brass_CIEND=2,0;brass_HOMLEN=2;brass_BKDIST=3654676;brass_FFV=900;brass_SID=HDAC4;brass_GENE=HDAC4;brass_TID=ENST00000345617;brass_AS=-1;brass_EPH=1;brass_RGN=intron;brass_RGNNO=5;brass_RGNC=27;brass_TSRDS=A00227:74:HCWC7DSXX:1:1255:7952:13886,A00227:74:HCWC7DSXX:1:1331:4824:11099,A00227:74:HCWC7DSXX:1:1452:12219:35023,A00227:74:HCWC7DSXX:1:1607:21197:9831,A00227:74:HCWC7DSXX:1:2101:2727:5181,A00227:74:HCWC7DSXX:1:2149:18548:36088,A00227:74:HCWC7DSXX:1:2159:1389:24408,A00227:74:HCWC7DSXX:1:2161:5376:11584,A00227:74:HCWC7DSXX:1:2230:18430:34068,A00227:74:HCWC7DSXX:1:2257:23285:25034,A00227:74:HCWC7DSXX:1:2310:30011:7654,A00227:74:HCWC7DSXX:1:2346:8901:5603,A00227:74:HCWC7DSXX:1:2420:15465:16407,A00227:74:HCWC7DSXX:1:2467:14769:21966,A00227:74:HCWC7DSXX:1:2474:4544:21010,A00227:74:HCWC7DSXX:1:2506:21007:30796,A00227:74:HCWC7DSXX:1:2556:24650:27868,A00227:74:HCWC7DSXX:1:2644:29613:32174,A00333:42:HCKYCDSXX:3:1541:25274:27727,A00333:42:HCKYCDSXX:3:1620:27344:31908,A00333:42:HCKYCDSXX:3:2202:10520:16391,A00333:42:HCKYCDSXX:3:2307:11071:1783,A00333:42:HCKYCDSXX:3:2319:9073:17362,A00333:42:HCKYCDSXX:3:2357:29948:7670,A00333:42:HCKYCDSXX:3:2511:14606:6621,A00333:42:HCKYCDSXX:3:2547:9787:30843,A00333:42:HCKYCDSXX:4:1124:19479:27837,A00333:42:HCKYCDSXX:4:1212:19669:17519,A00333:42:HCKYCDSXX:4:1312:19217:21559,A00333:42:HCKYCDSXX:4:1372:7346:21887,A00333:42:HCKYCDSXX:4:1431:30391:21621,A00333:42:HCKYCDSXX:4:1439:26847:1892,A00333:42:HCKYCDSXX:4:1530:24071:26960,A00333:42:HCKYCDSXX:4:1607:19108:31829,A00333:42:HCKYCDSXX:4:1674:31213:28870,A00333:42:HCKYCDSXX:4:2311:10809:34710,A00333:42:HCKYCDSXX:4:2317:19669:29262,A00333:42:HCKYCDSXX:4:2330:27525:21010,A00333:42:HCKYCDSXX:4:2332:27832:27837,A00333:42:HCKYCDSXX:4:2408:31394:19727,A00333:42:HCKYCDSXX:4:2414:31259:18521,A00333:42:HCKYCDSXX:4:2651:22851:11631,A00333:42:HCKYCDSXX:4:2674:4472:25958;brass_TRDS=A00333:42:HCKYCDSXX:3:2233:24903:33129/2,A00333:42:HCKYCDSXX:4:1312:19217:21559/2,A00333:42:HCKYCDSXX:4:2618:12626:27023/1,A00227:74:HCWC7DSXX:1:2149:18548:36088/2,A00333:42:HCKYCDSXX:3:2547:10059:30812/1,A00333:42:HCKYCDSXX:4:2274:16116:33880/2,A00333:42:HCKYCDSXX:4:1212:19669:17519/2,A00227:74:HCWC7DSXX:1:2467:14769:21966/1,A00227:74:HCWC7DSXX:1:1331:4824:11099/2,A00227:74:HCWC7DSXX:1:2257:23285:25034/1,A00333:42:HCKYCDSXX:4:1439:26847:1892/1,A00227:74:HCWC7DSXX:1:2257:23285:25097/1,A00333:42:HCKYCDSXX:3:2547:9787:30843/1,A00227:74:HCWC7DSXX:1:2113:20473:35884/1,A00227:74:HCWC7DSXX:1:2644:29613:32174/1,A00333:42:HCKYCDSXX:4:2608:18747:4053/1,A00227:74:HCWC7DSXX:1:2644:29423:31532/1,A00333:42:HCKYCDSXX:4:1607:19108:31829/1,A00333:42:HCKYCDSXX:4:1431:30391:21621/1,A00227:74:HCWC7DSXX:1:1559:32859:13526/1,A00227:74:HCWC7DSXX:1:1453:13141:6840/1,A00227:74:HCWC7DSXX:1:1452:12219:35023/1;brass_PH=1	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	51:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:29:0:0:0:0:0:4.779:0:0:0,4.5,49.5:4.5:0:0:17:0:0	135:1247.37:78:70:0:0:0:0:0:0:0:252.09:12:187.59:2:64.5:2:0:0:0:3509.76:1121.45:38:43:697.81:28:443.12:58:-75:28:0:75.2,0,78.5:75.2:28:75.01:62:43:22
2	237232232	.	N	N]22:36059373]	.	PASS	END=36059373;Callers=svaba,gridss,brass;NumCallers=3;CHR2=22;SVTYPE=TRA;STRANDS=++;gridss_REF=60;gridss_ASQ=1712.28;gridss_ASRP=92;gridss_ASSR=118;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=115.78;gridss_BSC=6;gridss_BSCQ=88.28;gridss_BUM=1;gridss_BUMQ=27.49;gridss_BVF=1;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1646.39;gridss_REFPAIR=28;gridss_RP=49;gridss_RPQ=795.17;gridss_SR=53;gridss_SRQ=845.06;gridss_VF=79;gridss_AS=1;gridss_BA=0;gridss_BEID=asm287-9844,asm48-84028;gridss_BEIDH=614,0;gridss_BEIDL=0,615;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=-1,0;gridss_CQ=4998.91;gridss_EVENT=gridss48_9587;gridss_HOMLEN=1;gridss_HOMSEQ=T;gridss_IHOMPOS=0,1;gridss_PARID=gridss48_9587o;gridss_RAS=1;gridss_SB=0.542373;gridss_SC=636M2X;svaba_DISC_MAPQ=59;svaba_NUMPARTS=0;svaba_MATEID=1586273:1;svaba_MAPQ=59;svaba_NM=-1;svaba_SCTG=2:237232300(+)-22:36059444(+)__22_36039501_36064501D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD;brass_BAS=95;brass_SVCLASS=translocation;brass_MATEID=460_1;brass_HOMSEQ=T;brass_IMPRECISE;brass_CIPOS=0,1;brass_CIEND=1,0;brass_HOMLEN=1;brass_BKDIST=-1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1130:12988:5008,A00227:74:HCWC7DSXX:1:1168:10411:18771,A00227:74:HCWC7DSXX:1:1257:23375:35837,A00227:74:HCWC7DSXX:1:1324:9164:31735,A00227:74:HCWC7DSXX:1:1336:24948:31078,A00227:74:HCWC7DSXX:1:1338:14959:30311,A00227:74:HCWC7DSXX:1:1403:22462:12336,A00227:74:HCWC7DSXX:1:1440:26982:20478,A00227:74:HCWC7DSXX:1:1445:15528:4460,A00227:74:HCWC7DSXX:1:1461:2627:23359,A00227:74:HCWC7DSXX:1:1528:4833:16063,A00227:74:HCWC7DSXX:1:1571:5448:4257,A00227:74:HCWC7DSXX:1:1654:14760:5760,A00227:74:HCWC7DSXX:1:2107:19560:32957,A00227:74:HCWC7DSXX:1:2109:10068:1329,A00227:74:HCWC7DSXX:1:2112:19741:35023,A00227:74:HCWC7DSXX:1:2112:8495:18865,A00227:74:HCWC7DSXX:1:2148:24695:3740,A00227:74:HCWC7DSXX:1:2171:30092:2942,A00227:74:HCWC7DSXX:1:2244:25798:3020,A00227:74:HCWC7DSXX:1:2251:19244:3004,A00227:74:HCWC7DSXX:1:2253:23764:2409,A00227:74:HCWC7DSXX:1:2434:10682:33677,A00227:74:HCWC7DSXX:1:2510:18819:23124,A00227:74:HCWC7DSXX:1:2520:1669:8296,A00227:74:HCWC7DSXX:1:2553:13006:36918,A00227:74:HCWC7DSXX:1:2636:27868:19194,A00333:42:HCKYCDSXX:3:1132:16215:32142,A00333:42:HCKYCDSXX:3:1240:11487:35634,A00333:42:HCKYCDSXX:3:1308:11388:31955,A00333:42:HCKYCDSXX:3:1414:32967:13589,A00333:42:HCKYCDSXX:3:2215:24605:7091,A00333:42:HCKYCDSXX:3:2257:2700:36855,A00333:42:HCKYCDSXX:3:2333:28836:20400,A00333:42:HCKYCDSXX:3:2469:24171:2988,A00333:42:HCKYCDSXX:3:2501:22381:28479,A00333:42:HCKYCDSXX:3:2535:31557:36448,A00333:42:HCKYCDSXX:4:1126:1976:8422,A00333:42:HCKYCDSXX:4:1240:25491:17268,A00333:42:HCKYCDSXX:4:1523:13819:29684,A00333:42:HCKYCDSXX:4:1542:11098:35117,A00333:42:HCKYCDSXX:4:1618:16080:23171,A00333:42:HCKYCDSXX:4:2209:13087:2237,A00333:42:HCKYCDSXX:4:2318:5737:17534,A00333:42:HCKYCDSXX:4:2325:16893:10426,A00333:42:HCKYCDSXX:4:2371:30129:23547,A00333:42:HCKYCDSXX:4:2411:10077:8234,A00333:42:HCKYCDSXX:4:2416:23782:20228,A00333:42:HCKYCDSXX:4:2570:1253:1282;brass_TRDS=A00227:74:HCWC7DSXX:1:1130:12988:5008/1,A00333:42:HCKYCDSXX:3:2257:2700:36855/2,A00227:74:HCWC7DSXX:1:1331:15420:35712/2,A00333:42:HCKYCDSXX:3:1609:3622:14184/2,A00333:42:HCKYCDSXX:3:1337:6307:31297/2,A00227:74:HCWC7DSXX:1:1324:9164:31735/1,A00333:42:HCKYCDSXX:3:1371:27995:34601/1,A00333:42:HCKYCDSXX:4:2371:30129:23547/1,A00333:42:HCKYCDSXX:3:1132:16215:32142/1,A00227:74:HCWC7DSXX:1:1257:23375:35837/2,A00227:74:HCWC7DSXX:1:2112:8495:18865/1,A00333:42:HCKYCDSXX:3:2333:28836:20400/2,A00227:74:HCWC7DSXX:1:1528:4833:16063/2,A00227:74:HCWC7DSXX:1:2478:12427:9204/1,A00227:74:HCWC7DSXX:1:2307:4345:29716/2,A00227:74:HCWC7DSXX:1:1461:2627:23359/1,A00227:74:HCWC7DSXX:1:1336:24948:31078/2,A00227:74:HCWC7DSXX:1:1571:3495:30185/1,A00333:42:HCKYCDSXX:4:1415:24930:18677/2,A00227:74:HCWC7DSXX:1:2223:5656:10567/1,A00333:42:HCKYCDSXX:3:1219:3070:3490/2,A00227:74:HCWC7DSXX:1:2337:17635:34381/2,A00227:74:HCWC7DSXX:1:2171:30092:2942/2,A00227:74:HCWC7DSXX:1:2520:1669:8296/1,A00333:42:HCKYCDSXX:4:1542:11098:35117/2,A00227:74:HCWC7DSXX:1:2510:18819:23124/2,A00227:74:HCWC7DSXX:1:2562:16251:4210/2,A00333:42:HCKYCDSXX:3:2469:24171:2988/2,A00227:74:HCWC7DSXX:1:2253:23764:2409/2,A00227:74:HCWC7DSXX:1:2420:32099:1470/1;brass_SID=APOL6;brass_GENE=APOL6;brass_TID=ENST00000409652;brass_AS=1;brass_RGN=3UTRexon;brass_RGNNO=3;brass_RGNC=3	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	46:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:26:0:0:0:0:0:3.935:0:0:0,3.9,42.9:3.9:0:0:14:0:0	14:1712.28:92:118:0:0:0:0:0:0:0:88.28:6:88.28:0:0:0:0:0:0:4998.91:1646.39:2:49:795.17:53:845.06:79:-99.02:33:0:99,9,0:9:33:99.02:5:49:30
2	238586402	.	N	[22:30026555[N	.	PASS	END=30026555;Callers=svaba,gridss,brass;NumCallers=3;CHR2=22;SVTYPE=TRA;STRANDS=--;gridss_REF=64;gridss_ASQ=1443.97;gridss_ASRP=81;gridss_ASSR=97;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=118.97;gridss_BSC=4;gridss_BSCQ=59.23;gridss_BUM=2;gridss_BUMQ=59.74;gridss_BVF=2;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1456.09;gridss_REFPAIR=45;gridss_RP=43;gridss_RPQ=697.81;gridss_SR=44;gridss_SRQ=719.39;gridss_VF=72;gridss_AS=1;gridss_BA=0;gridss_BEID=asm286-143428,asm48-217695;gridss_BEIDH=0,471;gridss_BEIDL=482,0;gridss_CAS=0;gridss_CQ=4300.57;gridss_EVENT=gridss48_62445;gridss_IHOMPOS=0,0;gridss_PARID=gridss48_62445o;gridss_RAS=1;gridss_SB=0.489655;gridss_SC=1X481M;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=1582504:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_22_30012501_30037501_0C;svaba_MATENM=0;svaba_SPAN=-1;svaba_EVDNC=ASDIS;brass_BAS=95;brass_SVCLASS=translocation;brass_MATEID=463_1;brass_BKDIST=-1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1171:1877:27978,A00227:74:HCWC7DSXX:1:1178:10339:11099,A00227:74:HCWC7DSXX:1:1245:10041:9893,A00227:74:HCWC7DSXX:1:1453:19877:31563,A00227:74:HCWC7DSXX:1:1477:19027:5102,A00227:74:HCWC7DSXX:1:1529:25201:35305,A00227:74:HCWC7DSXX:1:1534:2582:8061,A00227:74:HCWC7DSXX:1:1534:27932:1705,A00227:74:HCWC7DSXX:1:2118:4227:35211,A00227:74:HCWC7DSXX:1:2121:24975:6574,A00227:74:HCWC7DSXX:1:2202:17870:6449,A00227:74:HCWC7DSXX:1:2219:31105:4257,A00227:74:HCWC7DSXX:1:2221:9579:29669,A00227:74:HCWC7DSXX:1:2262:7464:31046,A00227:74:HCWC7DSXX:1:2341:18448:29089,A00227:74:HCWC7DSXX:1:2360:25464:7889,A00227:74:HCWC7DSXX:1:2365:1181:29747,A00227:74:HCWC7DSXX:1:2377:24840:26256,A00227:74:HCWC7DSXX:1:2427:5195:23923,A00227:74:HCWC7DSXX:1:2441:15546:6809,A00227:74:HCWC7DSXX:1:2570:9182:30326,A00333:42:HCKYCDSXX:3:1332:6036:15170,A00333:42:HCKYCDSXX:3:1427:18918:33004,A00333:42:HCKYCDSXX:3:1510:21314:13041,A00333:42:HCKYCDSXX:3:2266:21151:24972,A00333:42:HCKYCDSXX:3:2371:23393:19993,A00333:42:HCKYCDSXX:3:2617:23421:4726,A00333:42:HCKYCDSXX:3:2671:12518:28213,A00333:42:HCKYCDSXX:4:1111:2736:32440,A00333:42:HCKYCDSXX:4:1239:29803:21355,A00333:42:HCKYCDSXX:4:1244:28772:20134,A00333:42:HCKYCDSXX:4:1428:22101:4006,A00333:42:HCKYCDSXX:4:1452:27633:7357,A00333:42:HCKYCDSXX:4:1572:17833:16000,A00333:42:HCKYCDSXX:4:1650:13331:2409,A00333:42:HCKYCDSXX:4:1659:30924:19820,A00333:42:HCKYCDSXX:4:2160:32922:15170,A00333:42:HCKYCDSXX:4:2224:31810:20290,A00333:42:HCKYCDSXX:4:2306:1497:25880,A00333:42:HCKYCDSXX:4:2471:27742:1939,A00333:42:HCKYCDSXX:4:2537:9616:1047,A00333:42:HCKYCDSXX:4:2624:5629:30436,A00333:42:HCKYCDSXX:4:2627:3305:24752;brass_TRDS=A00227:74:HCWC7DSXX:1:1305:2356:32471/2,A00333:42:HCKYCDSXX:3:2371:23393:19993/2,A00227:74:HCWC7DSXX:1:2302:11207:6026/2,A00333:42:HCKYCDSXX:3:1273:12961:20306/2,A00333:42:HCKYCDSXX:3:2426:4155:17895/2,A00333:42:HCKYCDSXX:4:1576:29188:5822/2,A00227:74:HCWC7DSXX:1:1477:19027:5102/2,A00333:42:HCKYCDSXX:4:1502:1768:21465/1,A00227:74:HCWC7DSXX:1:2118:4227:35211/1,A00227:74:HCWC7DSXX:1:2336:31647:34851/1,A00333:42:HCKYCDSXX:4:1659:30924:19820/1,A00333:42:HCKYCDSXX:3:2266:21151:24972/1,A00227:74:HCWC7DSXX:1:1529:25201:35305/2,A00333:42:HCKYCDSXX:4:1576:29776:5901/2,A00227:74:HCWC7DSXX:1:2406:5086:28401/1,A00333:42:HCKYCDSXX:3:1427:18918:33004/1,A00227:74:HCWC7DSXX:1:1608:32316:7451/1,A00227:74:HCWC7DSXX:1:1534:27932:1705/1,A00227:74:HCWC7DSXX:1:2219:31105:4257/1,A00333:42:HCKYCDSXX:3:2239:31693:31109/2,A00227:74:HCWC7DSXX:1:2121:24975:6574/1,A00333:42:HCKYCDSXX:4:1674:25319:4476/2,A00227:74:HCWC7DSXX:1:2603:11605:25942/2,A00333:42:HCKYCDSXX:4:2445:5602:30107/1,A00333:42:HCKYCDSXX:4:1618:15329:15577/2,A00333:42:HCKYCDSXX:3:1241:23583:29559/2,A00333:42:HCKYCDSXX:3:2116:16405:33411/1,A00333:42:HCKYCDSXX:3:2309:21133:16673/2,A00227:74:HCWC7DSXX:1:1178:10339:11099/1,A00227:74:HCWC7DSXX:1:2427:5195:23923/1,A00333:42:HCKYCDSXX:4:2436:18421:15045/1;brass_SID=NF2;brass_GENE=NF2;brass_TID=ENST00000338641;brass_AS=1;brass_RGN=intron;brass_RGNNO=1;brass_RGNC=16	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	56:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:41:0:0:0:0:0:7.59:0:0:0,7.5,82.5:7.5:0:0:27:0:0	8:1443.97:81:97:0:0:0:0:0:0:0:91.48:4:59.23:1:32.25:1:0:0:0:4317.25:1456.09:4:43:697.81:44:719.39:72:-211.3:30:47:211.2,19.2,0:19.2:69:211.3:19:43:31
3	27547489	.	N	N[3:27547855[	.	LOWSUPPORT	END=27547855;Callers=svaba;NumCallers=1;CHR2=3;SVTYPE=DEL;SVLEN=366;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=278352:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_3_27538001_27563001_64C;svaba_MATENM=1;svaba_SPAN=366;svaba_HOMSEQ=GCACTCCAGCCTGGGCAACAGAGCAAGACTC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.12:0:0:0,9.9,108.9:9.9:0:0:36	17.15:0:4:0,16.8,303.6:16.8:4:5.915:108
3	36460131	.	N	[6:108321979[N	.	LOWSUPPORT	END=108321979;Callers=brass;NumCallers=1;CHR2=6;SVTYPE=TRA;STRANDS=--;brass_SVCLASS=translocation;brass_MATEID=507_1;brass_BKDIST=-1;brass_BALS=505_1|505_2;brass_OCC=2;brass_SID=STAC;brass_GENE=STAC;brass_TID=ENST00000273183;brass_AS=1;brass_RGN=intron;brass_RGNNO=1;brass_RGNC=11;brass_TSRDS=A00227:74:HCWC7DSXX:1:1601:26142:1360,A00227:74:HCWC7DSXX:1:2574:27751:10817,A00333:42:HCKYCDSXX:3:2309:25003:15608,A00333:42:HCKYCDSXX:4:1523:21784:15546	brass_PS:brass_RC	0:0	4:0
3	36460145	.	N	N]6:108322160]	.	LOWSUPPORT	END=108322160;Callers=brass;NumCallers=1;CHR2=6;SVTYPE=TRA;STRANDS=++;brass_SVCLASS=translocation;brass_MATEID=505_1;brass_BKDIST=-1;brass_BALS=507_1|507_2;brass_OCC=2;brass_SID=STAC;brass_GENE=STAC;brass_TID=ENST00000273183;brass_AS=1;brass_RGN=intron;brass_RGNNO=1;brass_RGNC=11;brass_TSRDS=A00227:74:HCWC7DSXX:1:1331:31720:20134,A00227:74:HCWC7DSXX:1:1527:31295:2487,A00227:74:HCWC7DSXX:1:2414:11966:27164,A00227:74:HCWC7DSXX:1:2664:31919:28808	brass_PS:brass_RC	0:0	4:0
3	37450770	.	N	N[3:37451049[	.	LOWSUPPORT	END=37451049;Callers=svaba;NumCallers=1;CHR2=3;SVTYPE=DEL;SVLEN=279;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=283373:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_3_37436001_37461001_25C;svaba_MATENM=0;svaba_SPAN=279;svaba_HOMSEQ=GTGCTGGGATTACAGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.12:0:0:0,9.9,108.9:9.9:0:0:36	28.4:0:4:0,28.3,429.1:28.3:4:5.367:148
3	50050084	.	N	N[3:50050446[	.	LOWSUPPORT	END=50050446;Callers=svaba;NumCallers=1;CHR2=3;SVTYPE=DEL;SVLEN=362;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=289743:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_3_50029001_50054001_25C;svaba_MATENM=0;svaba_SPAN=362;svaba_HOMSEQ=GATTACAGGCGTGAGCCACCGTGCC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.37:0:0:0,12.3,135.3:12.3:0:0:44	16.95:0:5:0,16.8,333.3:16.8:5:7.671:119
3	67810017	.	N	]3:163697346]N	.	LOWSUPPORT	END=163697346;Callers=svaba;NumCallers=1;CHR2=3;SVTYPE=DUP;SVLEN=95887329;STRANDS=-+;svaba_DISC_MAPQ=56;svaba_NUMPARTS=0;svaba_MATEID=343990:1;svaba_MAPQ=56;svaba_NM=-1;svaba_SCTG=3:67810017(-)-3:163697346(+)__3_163684501_163709501D;svaba_MATENM=-1;svaba_SPAN=95887329;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	5.06:0:0:0,4.8,52.8:4.8:0:0:18	-11.79:8:0:11.9,0,117.5:11.9:8:16.98:52
3	75614031	.	N	]11:3587521]N	.	LOWSUPPORT	END=3587521;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=TRA;STRANDS=-+;svaba_DISC_MAPQ=29;svaba_NUMPARTS=0;svaba_MATEID=997907:1;svaba_MAPQ=29;svaba_NM=-1;svaba_SCTG=3:75614031(-)-11:3587521(+)__11_3577001_3602001D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	6.465:0:0:0,6.3,69.3:6.3:0:0:23	-8.699:8:0:8.9,0,147.5:8.9:8:16.26:63
3	77213454	.	N	]3:77213855]N	.	LOWSUPPORT	END=77213855;Callers=svaba;NumCallers=1;CHR2=3;SVTYPE=DUP;SVLEN=401;STRANDS=-+;svaba_DISC_MAPQ=41;svaba_NUMPARTS=0;svaba_MATEID=304143:1;svaba_MAPQ=41;svaba_NM=-1;svaba_SCTG=3:77213454(-)-3:77213855(+)__3_77199501_77224501D;svaba_MATENM=-1;svaba_SPAN=401;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	8.995:0:0:0,8.7,95.7:8.7:0:0:32	-8.98:8:0:9.2,0,144.5:9.2:8:16.32:62
3	100410543	.	N	[8:64140164[N	.	LOWSUPPORT	END=64140164;Callers=brass;NumCallers=1;CHR2=8;SVTYPE=TRA;STRANDS=--;brass_SVCLASS=translocation;brass_MATEID=561_1;brass_BKDIST=-1;brass_BALS=560_1|560_2;brass_OCC=2;brass_SID=GPR128;brass_GENE=GPR128;brass_TID=ENST00000273352;brass_AS=1;brass_RGN=intron;brass_RGNNO=15;brass_RGNC=16;brass_TSRDS=A00227:74:HCWC7DSXX:1:1314:23204:16532,A00227:74:HCWC7DSXX:1:1324:27561:36260,A00227:74:HCWC7DSXX:1:1559:32353:17754,A00227:74:HCWC7DSXX:1:2439:14407:13510,A00333:42:HCKYCDSXX:4:1173:8775:31469,A00333:42:HCKYCDSXX:4:1233:18358:2754	brass_PS:brass_RC	0:0	6:0
3	100410560	.	N	N]8:64140339]	.	LOWSUPPORT	END=64140339;Callers=brass;NumCallers=1;CHR2=8;SVTYPE=TRA;STRANDS=++;brass_SVCLASS=translocation;brass_MATEID=560_1;brass_BKDIST=-1;brass_BALS=561_1|561_2;brass_OCC=2;brass_SID=GPR128;brass_GENE=GPR128;brass_TID=ENST00000273352;brass_AS=1;brass_RGN=intron;brass_RGNNO=15;brass_RGNC=16;brass_TSRDS=A00227:74:HCWC7DSXX:1:1272:7681:32299,A00227:74:HCWC7DSXX:1:1318:29496:29027,A00227:74:HCWC7DSXX:1:1524:15022:25504,A00227:74:HCWC7DSXX:1:1540:22869:11350,A00227:74:HCWC7DSXX:1:2109:19235:9345,A00227:74:HCWC7DSXX:1:2632:13051:29763,A00227:74:HCWC7DSXX:1:2668:28999:27633,A00333:42:HCKYCDSXX:3:2415:24921:8359,A00333:42:HCKYCDSXX:4:1665:29107:27258	brass_PS:brass_RC	0:0	9:0
3	108739229	.	N	N[3:108739653[	.	PASS	END=108739653;Callers=svaba,gridss;NumCallers=2;CHR2=3;SVTYPE=DEL;SVLEN=424;STRANDS=+-;gridss_REF=104;gridss_ASQ=857.4;gridss_ASRP=29;gridss_ASSR=85;gridss_BANRP=2;gridss_BANRPQ=32.44;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=207.4;gridss_BSC=6;gridss_BSCQ=87.91;gridss_BUM=4;gridss_BUMQ=119.49;gridss_BVF=3;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=962.15;gridss_REFPAIR=85;gridss_RP=15;gridss_RPQ=241.96;gridss_SR=35;gridss_SRQ=559.96;gridss_VF=61;gridss_AS=1;gridss_BA=0;gridss_BEID=asm60-130494,asm60-18191;gridss_BEIDH=0,0;gridss_BEIDL=434,598;gridss_CAS=0;gridss_CQ=2621.47;gridss_EVENT=gridss60_18030;gridss_IHOMPOS=0,0;gridss_PARID=gridss60_18030o;gridss_RAS=1;gridss_SB=0.507937;gridss_SC=1X593M;svaba_NUMPARTS=2;svaba_MATEID=317583:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_3_108731001_108756001_4C;svaba_MATENM=1;svaba_SPAN=424;svaba_INSERTION=AG;svaba_EVDNC=ASSMB	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	40:0:0:0:0:0:0:0:0:0:0:54.99:0:0:2:54.99:2:0:0:0:0:0:22:0:0:0:0:0:11.24:0:0:0,11.1,122.1:11.1:0:0:40	64:857.4:29:85:2:32.44:0:0:0:0:0:152.41:6:87.91:2:64.5:1:0:0:0:2621.47:962.15:63:15:241.96:35:559.96:61:-111.7:0:42:111.8,0,128.3:99:42:111.7:96
3	109220268	.	N	N[3:109246953[	.	PASS	END=109246953;Callers=svaba,gridss,brass;NumCallers=3;CHR2=3;SVTYPE=DEL;SVLEN=26685;STRANDS=+-;gridss_REF=104;gridss_ASQ=1375.74;gridss_ASRP=95;gridss_ASSR=78;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=177.81;gridss_BSC=6;gridss_BSCQ=88.07;gridss_BUM=3;gridss_BUMQ=89.74;gridss_BVF=2;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1423.53;gridss_REFPAIR=60;gridss_RP=47;gridss_RPQ=762.72;gridss_SR=32;gridss_SRQ=508.94;gridss_VF=70;gridss_AS=1;gridss_BA=0;gridss_BEID=asm60-137420,asm60-24590;gridss_BEIDH=0,0;gridss_BEIDL=481,573;gridss_CAS=0;gridss_CIPOS=0,3;gridss_CIRPOS=0,3;gridss_CQ=4070.93;gridss_EVENT=gridss60_19302;gridss_HOMLEN=3;gridss_HOMSEQ=GTT;gridss_IHOMPOS=0,3;gridss_PARID=gridss60_19302o;gridss_RAS=1;gridss_SB=0.586207;gridss_SC=1X2N1X575M;svaba_NUMPARTS=2;svaba_MATEID=317851:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_3_109245501_109270501_41C;svaba_MATENM=3;svaba_SPAN=26685;svaba_HOMSEQ=GTT;svaba_EVDNC=ASSMB;brass_SVCLASS=deletion;brass_MATEID=569_1;brass_BKDIST=26684;brass_OCC=1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1135:20184:13557,A00227:74:HCWC7DSXX:1:1136:3233:20682,A00227:74:HCWC7DSXX:1:1206:3929:29559,A00227:74:HCWC7DSXX:1:1225:20853:30154,A00227:74:HCWC7DSXX:1:1239:13160:24846,A00227:74:HCWC7DSXX:1:1302:17987:25097,A00227:74:HCWC7DSXX:1:1335:12237:3490,A00227:74:HCWC7DSXX:1:1342:10303:14857,A00227:74:HCWC7DSXX:1:1551:29875:8891,A00227:74:HCWC7DSXX:1:1552:23755:9502,A00227:74:HCWC7DSXX:1:1553:26332:8108,A00227:74:HCWC7DSXX:1:1613:5873:1892,A00227:74:HCWC7DSXX:1:1616:17255:27148,A00227:74:HCWC7DSXX:1:1623:8739:3004,A00227:74:HCWC7DSXX:1:1625:19343:10786,A00227:74:HCWC7DSXX:1:1627:7663:27070,A00227:74:HCWC7DSXX:1:2211:3378:4836,A00227:74:HCWC7DSXX:1:2276:24795:9267,A00227:74:HCWC7DSXX:1:2309:7148:25676,A00227:74:HCWC7DSXX:1:2422:30463:30733,A00227:74:HCWC7DSXX:1:2425:13485:22091,A00227:74:HCWC7DSXX:1:2432:10945:6042,A00227:74:HCWC7DSXX:1:2461:23863:22842,A00333:42:HCKYCDSXX:3:1234:32922:11913,A00333:42:HCKYCDSXX:3:1257:21793:20854,A00333:42:HCKYCDSXX:3:1354:20039:12085,A00333:42:HCKYCDSXX:3:2116:4453:1157,A00333:42:HCKYCDSXX:3:2161:20256:14559,A00333:42:HCKYCDSXX:3:2174:6876:32033,A00333:42:HCKYCDSXX:3:2205:26223:24549,A00333:42:HCKYCDSXX:3:2213:21775:27774,A00333:42:HCKYCDSXX:3:2250:20184:7012,A00333:42:HCKYCDSXX:3:2324:31810:27837,A00333:42:HCKYCDSXX:3:2510:17128:23202,A00333:42:HCKYCDSXX:3:2510:8965:16203,A00333:42:HCKYCDSXX:3:2677:12002:27320,A00333:42:HCKYCDSXX:4:1110:10022:33379,A00333:42:HCKYCDSXX:4:1114:9860:32628,A00333:42:HCKYCDSXX:4:1124:25554:35133,A00333:42:HCKYCDSXX:4:1215:18837:20149,A00333:42:HCKYCDSXX:4:1330:27896:12821,A00333:42:HCKYCDSXX:4:1433:16025:4225,A00333:42:HCKYCDSXX:4:1468:20790:5306,A00333:42:HCKYCDSXX:4:1615:8241:33552,A00333:42:HCKYCDSXX:4:1635:24261:7905,A00333:42:HCKYCDSXX:4:1649:18231:31532,A00333:42:HCKYCDSXX:4:1666:9950:20102,A00333:42:HCKYCDSXX:4:2659:30779:6261	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	43:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:39:0:0:0:0:0:5.903:0:0:0,5.7,62.7:5.7:0:0:21:0:0	61:1375.74:95:78:0:0:0:0:0:0:0:150.32:6:88.07:2:62.25:1:0:0:0:4070.93:1423.53:21:47:762.72:32:508.94:70:-138.6:0:45:138.6,12.6,0:12.6:45:138.6:45:48:0
3	114447124	.	N	]3:114485837]N	.	LOWSUPPORT	END=114485837;Callers=svaba;NumCallers=1;CHR2=3;SVTYPE=DUP;SVLEN=38713;STRANDS=-+;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=320599:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_3_114439501_114464501_34C;svaba_MATENM=0;svaba_SPAN=38713;svaba_HOMSEQ=TGTT;svaba_EVDNC=ASDIS	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.59:0:0:0,7.5,82.5:7.5:0:0:27	4.296:2:3:0,4.2,194.7:4.2:5:8.724:74
3	127580197	.	N	N]19:39045080]	.	LOWSUPPORT	END=39045080;Callers=svaba;NumCallers=1;CHR2=19;SVTYPE=TRA;STRANDS=++;svaba_DISC_MAPQ=45;svaba_NUMPARTS=0;svaba_MATEID=1492908:1;svaba_MAPQ=45;svaba_NM=-1;svaba_SCTG=3:127580197(+)-19:39045080(+)__19_39028501_39053501D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	5.06:0:0:0,4.8,52.8:4.8:0:0:18	-24.79:11:0:24.8,0,77.6:24.8:11:26.34:41
3	195228139	.	N	]3:195228455]N	.	LOWSUPPORT	END=195228455;Callers=svaba;NumCallers=1;CHR2=3;SVTYPE=DUP;SVLEN=316;STRANDS=-+;svaba_DISC_MAPQ=28;svaba_NUMPARTS=0;svaba_MATEID=361358:1;svaba_MAPQ=28;svaba_NM=-1;svaba_SCTG=3:195228139(-)-3:195228455(+)__3_195216001_195241001D;svaba_MATENM=-1;svaba_SPAN=316;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.4:0:0:0,10.2,112.2:10.2:0:0:37	4.094:10:0:0,3.9,339.9:3.9:10:17.96:132
4	3885326	.	N	N[11:67507037[	.	LOWSUPPORT	END=67507037;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=TRA;STRANDS=+-;svaba_DISC_MAPQ=40;svaba_NUMPARTS=0;svaba_MATEID=366042:1;svaba_MAPQ=40;svaba_NM=-1;svaba_SCTG=4:3885326(+)-11:67507037(-)__4_3871001_3896001D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.308:0:0:0,7.2,79.2:7.2:0:0:26	-16.99:10:0:17,0,125.9:17:10:21.85:57
4	46056004	.	N	N[4:46058196[	.	LOWSUPPORT	END=46058196;Callers=brass;NumCallers=1;CHR2=4;SVTYPE=DEL;SVLEN=2192;STRANDS=+-;brass_BAS=91;brass_SVCLASS=deletion;brass_MATEID=670_1;brass_BKDIST=2206;brass_FFV=460;brass_SID=GABRG1;brass_GENE=GABRG1;brass_TID=ENST00000295452;brass_AS=-1;brass_EPH=1;brass_RGN=intron;brass_RGNNO=7;brass_RGNC=9;brass_TSRDS=A00227:74:HCWC7DSXX:1:1460:22507:30702,A00227:74:HCWC7DSXX:1:2262:31331:22153,A00227:74:HCWC7DSXX:1:2325:30897:13573,A00333:42:HCKYCDSXX:4:1247:21450:8547,A00333:42:HCKYCDSXX:4:2502:31006:15702;brass_TRDS=A00227:74:HCWC7DSXX:1:2262:31331:22153/2,A00333:42:HCKYCDSXX:4:1102:27624:18709/1,A00333:42:HCKYCDSXX:3:2229:22688:25066/1,A00333:42:HCKYCDSXX:4:1570:2763:7435/2,A00227:74:HCWC7DSXX:1:1223:31964:14481/2,A00333:42:HCKYCDSXX:4:1344:31060:34773/2,A00227:74:HCWC7DSXX:1:1570:26277:21919/1,A00333:42:HCKYCDSXX:3:1146:23023:31093/1,A00333:42:HCKYCDSXX:4:2145:9109:4053/2,A00333:42:HCKYCDSXX:3:2514:3956:11475/2,A00227:74:HCWC7DSXX:1:2446:17779:34131/1,A00333:42:HCKYCDSXX:3:1550:8377:19413/2,A00227:74:HCWC7DSXX:1:2624:28293:10817/1,A00227:74:HCWC7DSXX:1:1163:19144:7874/1,A00227:74:HCWC7DSXX:1:1472:16143:24345/2,A00333:42:HCKYCDSXX:3:2671:11577:15687/2,A00227:74:HCWC7DSXX:1:1561:7383:36479/2,A00333:42:HCKYCDSXX:4:1247:21197:8829/2,A00227:74:HCWC7DSXX:1:2325:30897:13573/2,A00333:42:HCKYCDSXX:4:2502:31006:15702/1,A00227:74:HCWC7DSXX:1:1557:23628:10535/2,A00227:74:HCWC7DSXX:1:1231:17879:36714/1,A00333:42:HCKYCDSXX:3:2206:7328:25927/2,A00227:74:HCWC7DSXX:1:1522:9751:7827/2,A00333:42:HCKYCDSXX:3:1673:5231:29559/2,A00227:74:HCWC7DSXX:1:1453:29125:16861/2,A00333:42:HCKYCDSXX:4:1247:21450:8547/2,A00227:74:HCWC7DSXX:1:1320:27661:35399/2;brass_NRDS=A00333:42:HCKYCDSXX:3:2312:21875:10347/1,A00333:42:HCKYCDSXX:3:1250:28040:16892/1,A00333:42:HCKYCDSXX:3:2312:21630:10551/1,A00333:42:HCKYCDSXX:3:2659:29767:7858/1,A00333:42:HCKYCDSXX:3:2210:22733:29747/1,A00333:42:HCKYCDSXX:4:2304:7383:25207/1,A00333:42:HCKYCDSXX:4:1669:19868:4178/1,A00333:42:HCKYCDSXX:4:2364:12246:25864/1,A00333:42:HCKYCDSXX:4:1669:18792:12054/1,A00333:42:HCKYCDSXX:3:2312:21450:12179/1,A00333:42:HCKYCDSXX:4:1456:31213:25614/1,A00333:42:HCKYCDSXX:3:2250:30029:21684/1;brass_PH=1	brass_PS:brass_RC	0:0	5:28
4	81052245	.	N	]4:81052591]N	.	LOWSUPPORT	END=81052591;Callers=svaba;NumCallers=1;CHR2=4;SVTYPE=DUP;SVLEN=346;STRANDS=-+;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=411229:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_4_81046001_81071001_78C;svaba_MATENM=0;svaba_SPAN=346;svaba_HOMSEQ=T;svaba_EVDNC=ASDIS	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.4:0:0:0,10.2,112.2:10.2:0:0:37	10.34:4:5:0,10.2,320.1:10.2:7:11.78:119
4	82068541	.	N	[6:32744262[N	.	LOWSUPPORT	END=32744262;Callers=svaba;NumCallers=1;CHR2=6;SVTYPE=TRA;STRANDS=--;svaba_DISC_MAPQ=55;svaba_NUMPARTS=0;svaba_MATEID=585725:1;svaba_MAPQ=55;svaba_NM=-1;svaba_SCTG=4:82068541(-)-6:32744262(-)__6_32732001_32757001D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.59:0:0:0,7.5,82.5:7.5:0:0:27	-17.33:13:0:17.6,0,209:17.6:13:27.14:91
4	154193592	.	N	N[4:154193895[	.	LOWSUPPORT	END=154193895;Callers=svaba;NumCallers=1;CHR2=4;SVTYPE=DEL;SVLEN=303;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=446107:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_4_154178501_154203501_93C;svaba_MATENM=0;svaba_SPAN=303;svaba_HOMSEQ=TTACAGGCGTGAGCCACTGCG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.65:0:0:0,12.6,138.6:12.6:0:0:45	28.47:0:5:0,28.3,458.8:28.3:5:7.024:160
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4	187707631	.	N	N[5:1314469[	.	PASS	END=1314469;Callers=svaba,gridss,brass;NumCallers=3;CHR2=5;SVTYPE=TRA;STRANDS=+-;gridss_REF=132;gridss_ASQ=1487.25;gridss_ASRP=87;gridss_ASSR=99;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=299.86;gridss_BSC=1;gridss_BSCQ=14.37;gridss_BUM=9;gridss_BUMQ=285.49;gridss_BVF=9;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1489.11;gridss_REFPAIR=65;gridss_RP=44;gridss_RPQ=714.03;gridss_SR=49;gridss_SRQ=775.08;gridss_VF=72;gridss_AS=1;gridss_BA=0;gridss_BEID=asm87-106506,asm88-177743;gridss_BEIDH=0,0;gridss_BEIDL=128,571;gridss_CAS=0;gridss_CIPOS=0,2;gridss_CIRPOS=0,2;gridss_CQ=4465.48;gridss_EVENT=gridss87_33437;gridss_HOMLEN=2;gridss_HOMSEQ=CT;gridss_IHOMPOS=0,2;gridss_PARID=gridss87_33437o;gridss_RAS=1;gridss_SB=0.52349;gridss_SC=1X1N1X564M;svaba_NUMPARTS=2;svaba_MATEID=470055:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_5_1298501_1323501_19C;svaba_MATENM=0;svaba_SPAN=-1;svaba_HOMSEQ=CT;svaba_EVDNC=ASSMB;brass_BAS=85;brass_SVCLASS=translocation;brass_MATEID=786_1;brass_HOMSEQ=CT;brass_IMPRECISE;brass_CIPOS=0,2;brass_CIEND=0,2;brass_HOMLEN=2;brass_BKDIST=-1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1112:31060:15765,A00227:74:HCWC7DSXX:1:1164:23375:4711,A00227:74:HCWC7DSXX:1:1166:10276:22451,A00227:74:HCWC7DSXX:1:1231:9498:28087,A00227:74:HCWC7DSXX:1:1237:10836:27899,A00227:74:HCWC7DSXX:1:1249:10176:15358,A00227:74:HCWC7DSXX:1:1252:17056:23672,A00227:74:HCWC7DSXX:1:1265:17879:24878,A00227:74:HCWC7DSXX:1:1273:2745:7216,A00227:74:HCWC7DSXX:1:1430:24071:23015,A00227:74:HCWC7DSXX:1:1438:13241:19069,A00227:74:HCWC7DSXX:1:1554:16776:23281,A00227:74:HCWC7DSXX:1:1567:4291:7952,A00227:74:HCWC7DSXX:1:1573:20925:35446,A00227:74:HCWC7DSXX:1:1603:11586:2487,A00227:74:HCWC7DSXX:1:2125:6298:22514,A00227:74:HCWC7DSXX:1:2128:18186:17174,A00227:74:HCWC7DSXX:1:2224:9326:22091,A00227:74:HCWC7DSXX:1:2239:16541:33113,A00227:74:HCWC7DSXX:1:2256:19587:25269,A00227:74:HCWC7DSXX:1:2264:30337:4773,A00227:74:HCWC7DSXX:1:2318:27263:4711,A00227:74:HCWC7DSXX:1:2323:13937:12759,A00227:74:HCWC7DSXX:1:2331:19470:2581,A00227:74:HCWC7DSXX:1:2520:7717:13103,A00227:74:HCWC7DSXX:1:2558:11749:23249,A00227:74:HCWC7DSXX:1:2567:6686:11350,A00227:74:HCWC7DSXX:1:2633:15022:19867,A00227:74:HCWC7DSXX:1:2673:21847:1251,A00333:42:HCKYCDSXX:3:1268:27172:21527,A00333:42:HCKYCDSXX:3:1539:18114:32925,A00333:42:HCKYCDSXX:3:2237:6135:7921,A00333:42:HCKYCDSXX:3:2251:6813:3521,A00333:42:HCKYCDSXX:3:2460:4137:20932,A00333:42:HCKYCDSXX:4:1219:30436:8578,A00333:42:HCKYCDSXX:4:1311:3775:25504,A00333:42:HCKYCDSXX:4:1320:23502:2613,A00333:42:HCKYCDSXX:4:1330:24840:1705,A00333:42:HCKYCDSXX:4:1361:15808:2065,A00333:42:HCKYCDSXX:4:2313:27462:25316,A00333:42:HCKYCDSXX:4:2403:16495:25081,A00333:42:HCKYCDSXX:4:2427:21332:18302,A00333:42:HCKYCDSXX:4:2570:13711:13307,A00333:42:HCKYCDSXX:4:2577:12572:31751;brass_TRDS=A00227:74:HCWC7DSXX:1:1252:17056:23672/1,A00227:74:HCWC7DSXX:1:1505:18593:24392/1,A00333:42:HCKYCDSXX:4:1642:28754:4194/2,A00333:42:HCKYCDSXX:4:1317:6894:6918/1,A00227:74:HCWC7DSXX:1:2520:7717:13103/1,A00227:74:HCWC7DSXX:1:2405:15185:2581/1,A00333:42:HCKYCDSXX:3:2237:6135:7921/1,A00227:74:HCWC7DSXX:1:1231:9498:28087/1,A00333:42:HCKYCDSXX:4:1311:3775:25504/2,A00333:42:HCKYCDSXX:3:2256:25889:7780/2,A00227:74:HCWC7DSXX:1:1438:13241:19069/2,A00227:74:HCWC7DSXX:1:2323:13937:12759/1,A00333:42:HCKYCDSXX:3:2460:4137:20932/2,A00333:42:HCKYCDSXX:4:1553:17996:20040/1,A00227:74:HCWC7DSXX:1:1368:11198:11334/1,A00333:42:HCKYCDSXX:4:2476:23945:3317/1,A00333:42:HCKYCDSXX:4:1523:30987:31704/1,A00227:74:HCWC7DSXX:1:2128:18186:17174/2,A00227:74:HCWC7DSXX:1:1231:9426:27962/1,A00227:74:HCWC7DSXX:1:2334:23710:26115/2,A00227:74:HCWC7DSXX:1:1603:11586:2487/1,A00227:74:HCWC7DSXX:1:1157:16360:33176/1,A00227:74:HCWC7DSXX:1:1112:31060:15765/1,A00227:74:HCWC7DSXX:1:2357:20238:21919/2,A00333:42:HCKYCDSXX:3:2251:6813:3521/2,A00227:74:HCWC7DSXX:1:1265:17879:24878/2,A00227:74:HCWC7DSXX:1:1554:16776:23281/1,A00227:74:HCWC7DSXX:1:1252:16911:23610/1	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	53:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:31:0:0:0:0:0:6.746:0:0:0,6.6,72.6:6.6:0:0:24:0:0	79:1487.25:87:99:0:0:0:0:0:0:0:272.37:1:14.37:8:258:8:0:0:0:4465.48:1489.11:34:44:714.03:49:775.08:72:-164.3:0:51:161.7,9.3,0:9.3:51:164.3:57:44:28
5	1289593	.	N	N[5:1291058[	.	LOWSUPPORT	END=1291058;Callers=brass;NumCallers=1;CHR2=5;SVTYPE=DEL;SVLEN=1465;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=796_1;brass_BKDIST=1464;brass_FFV=460;brass_OCC=1;brass_SID=TERT;brass_GENE=TERT;brass_TID=ENST00000310581;brass_AS=-1;brass_EPH=1;brass_RGN=intron;brass_RGNNO=2;brass_RGNC=16;brass_TSRDS=A00333:42:HCKYCDSXX:3:1248:7988:6464,A00333:42:HCKYCDSXX:3:1273:12283:30749,A00333:42:HCKYCDSXX:3:1464:3188:12931,A00333:42:HCKYCDSXX:3:2236:3595:19116,A00333:42:HCKYCDSXX:4:2662:10755:23563;brass_PH=1	brass_PS:brass_RC	0:0	5:0
5	59387596	.	N	]10:12373332]N	.	LOWSUPPORT	END=12373332;Callers=brass;NumCallers=1;CHR2=10;SVTYPE=TRA;STRANDS=-+;brass_SVCLASS=translocation;brass_MATEID=842_2;brass_BKDIST=-1;brass_BALS=843_1|843_2;brass_OCC=2;brass_TSRDS=A00227:74:HCWC7DSXX:1:2262:7491:3537,A00227:74:HCWC7DSXX:1:2454:4336:24408,A00333:42:HCKYCDSXX:3:2271:5520:2284,A00333:42:HCKYCDSXX:4:2228:14624:11130;brass_SID=PDE4D;brass_GENE=PDE4D;brass_TID=ENST00000502484;brass_AS=-1;brass_RGN=intron;brass_RGNNO=2;brass_RGNC=17	brass_PS:brass_RC	0:0	4:0
5	59387911	.	N	N[10:12373318[	.	LOWSUPPORT	END=12373318;Callers=brass;NumCallers=1;CHR2=10;SVTYPE=TRA;STRANDS=+-;brass_SVCLASS=translocation;brass_MATEID=843_2;brass_BKDIST=-1;brass_BALS=842_1|842_2;brass_OCC=2;brass_TSRDS=A00227:74:HCWC7DSXX:1:1201:11505:36511,A00227:74:HCWC7DSXX:1:1618:29378:24095,A00227:74:HCWC7DSXX:1:2547:6777:9251,A00333:42:HCKYCDSXX:3:2511:30553:5932;brass_SID=PDE4D;brass_GENE=PDE4D;brass_TID=ENST00000502484;brass_AS=-1;brass_RGN=intron;brass_RGNNO=2;brass_RGNC=17	brass_PS:brass_RC	0:0	4:0
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5	71595442	.	N	[5:74746257[N	.	PASS	END=74746257;Callers=svaba,gridss,brass;NumCallers=3;CHR2=5;SVTYPE=INV;SVLEN=3150815;STRANDS=--;gridss_REF=105;gridss_ASQ=1407.69;gridss_ASRP=83;gridss_ASSR=87;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=268.66;gridss_BSC=13;gridss_BSCQ=208.92;gridss_BUM=2;gridss_BUMQ=59.74;gridss_BVF=2;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1329.98;gridss_REFPAIR=49;gridss_RP=44;gridss_RPQ=714.03;gridss_SR=34;gridss_SRQ=545.94;gridss_VF=71;gridss_AS=1;gridss_BA=0;gridss_BEID=asm95-103633,asm95-129802;gridss_BEIDH=546,0;gridss_BEIDL=0,559;gridss_CAS=0;gridss_CQ=4012.07;gridss_EVENT=gridss95_32724;gridss_IHOMPOS=0,0;gridss_PARID=gridss95_32724o;gridss_RAS=1;gridss_SB=0.507353;gridss_SC=1X549M;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=509485:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_5_74725001_74750001_6C;svaba_MATENM=0;svaba_SPAN=3150815;svaba_INSERTION=CACTGA;svaba_EVDNC=ASDIS;brass_SVCLASS=inversion;brass_MATEID=850_1;brass_BKDIST=3150814;brass_FFV=540;brass_OCC=1;brass_SID=COL4A3BP;brass_GENE=COL4A3BP;brass_TID=ENST00000380494;brass_AS=-1;brass_EPH=1;brass_RGN=intron;brass_RGNNO=4;brass_RGNC=19;brass_TSRDS=A00227:74:HCWC7DSXX:1:1244:27028:16736,A00227:74:HCWC7DSXX:1:1335:9010:32722,A00227:74:HCWC7DSXX:1:1371:26521:33238,A00227:74:HCWC7DSXX:1:1434:28583:1642,A00227:74:HCWC7DSXX:1:1501:20184:7795,A00227:74:HCWC7DSXX:1:1549:9579:4742,A00227:74:HCWC7DSXX:1:1630:21468:28369,A00227:74:HCWC7DSXX:1:1638:29487:10629,A00227:74:HCWC7DSXX:1:1649:14615:26991,A00227:74:HCWC7DSXX:1:2115:32949:30060,A00227:74:HCWC7DSXX:1:2118:31295:16078,A00227:74:HCWC7DSXX:1:2119:11722:2722,A00227:74:HCWC7DSXX:1:2121:17201:30906,A00227:74:HCWC7DSXX:1:2363:6596:34147,A00227:74:HCWC7DSXX:1:2372:8377:19132,A00227:74:HCWC7DSXX:1:2434:16052:11287,A00227:74:HCWC7DSXX:1:2525:7518:30326,A00227:74:HCWC7DSXX:1:2551:29478:8703,A00227:74:HCWC7DSXX:1:2601:21929:11475,A00227:74:HCWC7DSXX:1:2613:27823:26506,A00227:74:HCWC7DSXX:1:2634:7148:14372,A00227:74:HCWC7DSXX:1:2667:5249:29371,A00333:42:HCKYCDSXX:3:1226:11442:5494,A00333:42:HCKYCDSXX:3:1238:20582:3255,A00333:42:HCKYCDSXX:3:1313:15203:33927,A00333:42:HCKYCDSXX:3:1469:24053:24205,A00333:42:HCKYCDSXX:3:2134:14470:20102,A00333:42:HCKYCDSXX:3:2227:7030:2581,A00333:42:HCKYCDSXX:3:2243:9353:7983,A00333:42:HCKYCDSXX:3:2360:22869:16986,A00333:42:HCKYCDSXX:3:2368:22426:4413,A00333:42:HCKYCDSXX:3:2544:20184:25551,A00333:42:HCKYCDSXX:3:2667:22950:18850,A00333:42:HCKYCDSXX:4:1233:19162:4899,A00333:42:HCKYCDSXX:4:1413:10239:28307,A00333:42:HCKYCDSXX:4:1578:31855:5400,A00333:42:HCKYCDSXX:4:1616:15076:21684,A00333:42:HCKYCDSXX:4:2124:30843:6527,A00333:42:HCKYCDSXX:4:2213:5014:27555,A00333:42:HCKYCDSXX:4:2255:30599:35790,A00333:42:HCKYCDSXX:4:2303:28836:5024,A00333:42:HCKYCDSXX:4:2429:8531:6621,A00333:42:HCKYCDSXX:4:2502:5141:4163,A00333:42:HCKYCDSXX:4:2639:13639:26334	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	41:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:21:0:0:0:0:0:5.622:0:0:0,5.4,59.4:5.4:0:0:20:0:0	64:1407.69:83:87:0:0:0:0:0:0:0:241.17:13:208.92:1:32.25:1:0:0:0:3997.64:1329.98:28:44:714.03:34:545.94:71:-198:35:41:198,18,0:18:65:198:47:44:0
5	74766330	.	N	[6:117658390[N	.	PASS	END=117658390;Callers=svaba,gridss,brass;NumCallers=3;CHR2=6;SVTYPE=TRA;STRANDS=--;gridss_REF=100;gridss_ASQ=1240.64;gridss_ASRP=70;gridss_ASSR=82;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=177.6;gridss_BSC=8;gridss_BSCQ=117.86;gridss_BUM=2;gridss_BUMQ=59.74;gridss_BVF=2;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1181.11;gridss_REFPAIR=44;gridss_RP=37;gridss_RPQ=600.44;gridss_SR=35;gridss_SRQ=554.8;gridss_VF=65;gridss_AS=1;gridss_BA=0;gridss_BEID=asm118-114387,asm95-130022;gridss_BEIDH=0,460;gridss_BEIDL=497,0;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=-1,0;gridss_CQ=3560.77;gridss_EVENT=gridss95_35394;gridss_HOMLEN=1;gridss_HOMSEQ=C;gridss_IHOMPOS=0,1;gridss_PARID=gridss95_35394o;gridss_RAS=1;gridss_SB=0.488;gridss_SC=2X495M;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=629100:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_6_117649001_117674001_8C;svaba_MATENM=1;svaba_SPAN=-1;svaba_HOMSEQ=G;svaba_EVDNC=ASDIS;brass_BAS=94;brass_SVCLASS=translocation;brass_MATEID=853_1;brass_HOMSEQ=C;brass_IMPRECISE;brass_CIPOS=0,1;brass_CIEND=1,0;brass_HOMLEN=1;brass_BKDIST=-1;brass_FFV=500;brass_SID=ROS1;brass_GENE=ROS1;brass_TID=ENST00000368508;brass_AS=-1;brass_RGN=exon;brass_RGNNO=31;brass_RGNC=43;brass_TSRDS=A00227:74:HCWC7DSXX:1:1156:23258:6793,A00227:74:HCWC7DSXX:1:1213:6804:10676,A00227:74:HCWC7DSXX:1:1240:9001:23249,A00227:74:HCWC7DSXX:1:1278:22815:7373,A00227:74:HCWC7DSXX:1:1314:3748:20447,A00227:74:HCWC7DSXX:1:1315:26648:4805,A00227:74:HCWC7DSXX:1:1316:3143:31046,A00227:74:HCWC7DSXX:1:1333:12608:18756,A00227:74:HCWC7DSXX:1:1348:20555:6402,A00227:74:HCWC7DSXX:1:1416:1805:2331,A00227:74:HCWC7DSXX:1:1521:2944:8155,A00227:74:HCWC7DSXX:1:1636:27688:24486,A00227:74:HCWC7DSXX:1:1650:27525:6887,A00227:74:HCWC7DSXX:1:2114:16360:19335,A00227:74:HCWC7DSXX:1:2119:23990:22780,A00227:74:HCWC7DSXX:1:2160:5782:13228,A00227:74:HCWC7DSXX:1:2267:21748:8625,A00227:74:HCWC7DSXX:1:2306:16351:21919,A00227:74:HCWC7DSXX:1:2416:21386:22091,A00227:74:HCWC7DSXX:1:2522:8531:20932,A00227:74:HCWC7DSXX:1:2615:6849:13949,A00227:74:HCWC7DSXX:1:2633:4029:31579,A00333:42:HCKYCDSXX:3:1348:18186:25629,A00333:42:HCKYCDSXX:3:2213:20708:11929,A00333:42:HCKYCDSXX:3:2227:7744:14152,A00333:42:HCKYCDSXX:3:2647:29550:27273,A00333:42:HCKYCDSXX:4:1116:13819:28056,A00333:42:HCKYCDSXX:4:1134:1542:31469,A00333:42:HCKYCDSXX:4:1308:30192:24815,A00333:42:HCKYCDSXX:4:1362:6316:33223,A00333:42:HCKYCDSXX:4:1605:28962:10629,A00333:42:HCKYCDSXX:4:1660:21585:20650,A00333:42:HCKYCDSXX:4:2268:27688:1407,A00333:42:HCKYCDSXX:4:2302:19361:33489,A00333:42:HCKYCDSXX:4:2445:6442:5885,A00333:42:HCKYCDSXX:4:2472:32090:19241,A00333:42:HCKYCDSXX:4:2622:32262:6825;brass_TRDS=A00227:74:HCWC7DSXX:1:1636:27688:24486/1,A00227:74:HCWC7DSXX:1:2442:15139:31469/2,A00227:74:HCWC7DSXX:1:1348:20555:6402/2,A00227:74:HCWC7DSXX:1:1610:6867:30326/2,A00333:42:HCKYCDSXX:3:2516:26675:31657/2,A00227:74:HCWC7DSXX:1:2608:15863:34381/2,A00227:74:HCWC7DSXX:1:1213:6804:10676/1,A00227:74:HCWC7DSXX:1:1429:5150:31986/2,A00333:42:HCKYCDSXX:3:2647:29550:27273/2,A00227:74:HCWC7DSXX:1:2134:25183:22122/1,A00227:74:HCWC7DSXX:1:1446:5014:29215/1,A00227:74:HCWC7DSXX:1:1521:2944:8155/2,A00227:74:HCWC7DSXX:1:2434:31286:24799/1,A00333:42:HCKYCDSXX:3:1564:11424:29387/2,A00333:42:HCKYCDSXX:3:1563:14877:26725/2,A00227:74:HCWC7DSXX:1:2114:16360:19335/1,A00227:74:HCWC7DSXX:1:1135:16143:7529/2,A00333:42:HCKYCDSXX:3:1647:30662:13291/2,A00227:74:HCWC7DSXX:1:2176:29749:24236/2,A00333:42:HCKYCDSXX:3:1438:30789:16673/1,A00333:42:HCKYCDSXX:3:1348:18186:25629/1,A00227:74:HCWC7DSXX:1:1253:18331:12007/1	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	34:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:18:0:0:0:0:0:4.498:0:0:0,4.2,46.2:4.2:0:0:16:0:0	66:1240.64:70:82:0:0:0:0:0:0:0:150.11:8:117.86:1:32.25:1:0:0:0:3576.99:1181.11:26:37:600.44:35:554.8:65:-194.7:23:44:194.7,17.7,0:17.7:64:194.7:46:37:22
5	81289165	.	N	N]X:11609058]	.	LOWSUPPORT	END=11609058;Callers=svaba;NumCallers=1;CHR2=X;SVTYPE=TRA;STRANDS=++;svaba_DISC_MAPQ=35;svaba_NUMPARTS=0;svaba_MATEID=1605117:1;svaba_MAPQ=35;svaba_NM=-1;svaba_SCTG=5:81289165(+)-23:11609058(+)__23_11588501_11613501D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	2.53:0:0:0,2.4,26.4:2.4:0:0:9	-26.19:11:0:26.3,0,62.6:26.3:11:27.08:36
5	94337122	.	N	[6:82833167[N	.	PASS	END=82833167;Callers=gridss,brass;NumCallers=2;CHR2=6;SVTYPE=TRA;STRANDS=--;gridss_REF=90;gridss_ASQ=1949.85;gridss_ASRP=110;gridss_ASSR=124;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=199.53;gridss_BSC=7;gridss_BSCQ=102.78;gridss_BUM=3;gridss_BUMQ=96.75;gridss_BVF=3;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1828.87;gridss_REFPAIR=63;gridss_RP=56;gridss_RPQ=908.77;gridss_SR=57;gridss_SRQ=912.88;gridss_VF=89;gridss_AS=1;gridss_BA=0;gridss_BEID=asm114-133959,asm97-175368;gridss_BEIDH=0,497;gridss_BEIDL=574,0;gridss_CAS=0;gridss_CIPOS=-5,0;gridss_CIRPOS=0,5;gridss_CQ=5600.36;gridss_EVENT=gridss97_49720;gridss_HOMLEN=5;gridss_HOMSEQ=CTTCA;gridss_IHOMPOS=-5,0;gridss_PARID=gridss97_49720o;gridss_RAS=1;gridss_SB=0.515957;gridss_SC=1X4N1X563M;brass_BAS=94;brass_SVCLASS=translocation;brass_MATEID=867_1;brass_HOMSEQ=CTTCA;brass_IMPRECISE;brass_CIPOS=0,5;brass_CIEND=5,0;brass_HOMLEN=5;brass_BKDIST=-1;brass_SID=MCTP1;brass_GENE=MCTP1;brass_TID=ENST00000515393;brass_AS=-1;brass_EPH=1;brass_RGN=intron;brass_RGNNO=2;brass_RGNC=23;brass_TSRDS=A00227:74:HCWC7DSXX:1:1110:26892:11490,A00227:74:HCWC7DSXX:1:1133:19904:1423,A00227:74:HCWC7DSXX:1:1149:13928:13401,A00227:74:HCWC7DSXX:1:1152:25464:3944,A00227:74:HCWC7DSXX:1:1233:18728:2769,A00227:74:HCWC7DSXX:1:1237:19859:32941,A00227:74:HCWC7DSXX:1:1241:4526:26209,A00227:74:HCWC7DSXX:1:1311:1163:13432,A00227:74:HCWC7DSXX:1:1323:28348:9095,A00227:74:HCWC7DSXX:1:1330:25192:6042,A00227:74:HCWC7DSXX:1:1331:8956:1877,A00227:74:HCWC7DSXX:1:1333:32904:10034,A00227:74:HCWC7DSXX:1:1338:7292:16125,A00227:74:HCWC7DSXX:1:1342:16649:33896,A00227:74:HCWC7DSXX:1:1403:18656:1235,A00227:74:HCWC7DSXX:1:1519:10710:34976,A00227:74:HCWC7DSXX:1:1529:23854:14403,A00227:74:HCWC7DSXX:1:1571:9272:16047,A00227:74:HCWC7DSXX:1:1618:20130:19695,A00227:74:HCWC7DSXX:1:1659:25509:31422,A00227:74:HCWC7DSXX:1:2142:13910:34413,A00227:74:HCWC7DSXX:1:2230:18864:31187,A00227:74:HCWC7DSXX:1:2262:13042:11303,A00227:74:HCWC7DSXX:1:2266:22299:21449,A00227:74:HCWC7DSXX:1:2433:9046:26522,A00227:74:HCWC7DSXX:1:2473:17309:26052,A00227:74:HCWC7DSXX:1:2473:8169:31203,A00227:74:HCWC7DSXX:1:2528:29297:23891,A00227:74:HCWC7DSXX:1:2530:22417:8061,A00227:74:HCWC7DSXX:1:2567:16577:31360,A00227:74:HCWC7DSXX:1:2630:29496:25113,A00227:74:HCWC7DSXX:1:2646:25509:33270,A00333:42:HCKYCDSXX:3:1135:9290:2988,A00333:42:HCKYCDSXX:3:1172:12292:10598,A00333:42:HCKYCDSXX:3:1353:3803:31845,A00333:42:HCKYCDSXX:3:1404:19190:18724,A00333:42:HCKYCDSXX:3:1405:27715:35023,A00333:42:HCKYCDSXX:3:1548:23927:7326,A00333:42:HCKYCDSXX:3:1574:28565:12727,A00333:42:HCKYCDSXX:3:1623:16875:21449,A00333:42:HCKYCDSXX:3:1655:19542:33520,A00333:42:HCKYCDSXX:3:1676:1127:8829,A00333:42:HCKYCDSXX:3:2219:18168:21966,A00333:42:HCKYCDSXX:3:2238:2049:9267,A00333:42:HCKYCDSXX:3:2303:10149:30499,A00333:42:HCKYCDSXX:3:2341:2808:11710,A00333:42:HCKYCDSXX:3:2446:1380:19507,A00333:42:HCKYCDSXX:3:2470:5990:36542,A00333:42:HCKYCDSXX:3:2611:23583:10551,A00333:42:HCKYCDSXX:4:1137:1660:31172,A00333:42:HCKYCDSXX:4:1262:27877:13197,A00333:42:HCKYCDSXX:4:1508:7392:23844,A00333:42:HCKYCDSXX:4:1528:30083:31610,A00333:42:HCKYCDSXX:4:2163:10104:6308,A00333:42:HCKYCDSXX:4:2477:4227:5556,A00333:42:HCKYCDSXX:4:2523:10619:9674;brass_TRDS=A00227:74:HCWC7DSXX:1:2344:5168:15984/1,A00227:74:HCWC7DSXX:1:2262:13042:11303/1,A00227:74:HCWC7DSXX:1:1407:26901:13761/2,A00333:42:HCKYCDSXX:3:1623:16875:21449/1,A00227:74:HCWC7DSXX:1:1237:19859:32941/2,A00227:74:HCWC7DSXX:1:2319:11550:12696/1,A00227:74:HCWC7DSXX:1:1152:25464:3944/2,A00227:74:HCWC7DSXX:1:2319:11921:14685/1,A00227:74:HCWC7DSXX:1:1203:10303:6214/1,A00227:74:HCWC7DSXX:1:1670:18918:30060/2,A00227:74:HCWC7DSXX:1:2646:25509:33270/1,A00333:42:HCKYCDSXX:4:1137:1660:31172/2,A00227:74:HCWC7DSXX:1:1435:25681:7138/1,A00227:74:HCWC7DSXX:1:2473:17309:26052/1,A00227:74:HCWC7DSXX:1:1342:16649:33896/1,A00227:74:HCWC7DSXX:1:1552:29975:31015/2,A00227:74:HCWC7DSXX:1:1626:10728:9518/2,A00227:74:HCWC7DSXX:1:2567:16577:31360/1,A00227:74:HCWC7DSXX:1:1645:2691:27258/1,A00333:42:HCKYCDSXX:3:2670:8296:33426/2,A00227:74:HCWC7DSXX:1:2575:19054:24972/1,A00227:74:HCWC7DSXX:1:1529:23854:14403/1,A00227:74:HCWC7DSXX:1:2334:21368:7748/2,A00333:42:HCKYCDSXX:3:2372:9136:32127/1,A00227:74:HCWC7DSXX:1:1333:32904:10034/2,A00333:42:HCKYCDSXX:3:2611:23583:10551/1,A00227:74:HCWC7DSXX:1:2473:8169:31203/1,A00227:74:HCWC7DSXX:1:2121:2022:5619/2,A00227:74:HCWC7DSXX:1:2332:18059:6496/1,A00333:42:HCKYCDSXX:3:2555:1967:29418/1,A00333:42:HCKYCDSXX:3:1676:1127:8829/1,A00333:42:HCKYCDSXX:3:1172:12292:10598/2	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:brass_PS:brass_RC	42:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:29:0:0:0:0:0:0:0	48:1949.85:110:124:0:0:0:0:0:0:0:199.53:7:102.78:3:96.75:3:0:0:0:5600.36:1828.87:34:56:908.77:57:912.88:89:56:32
5	95156372	.	N	N[5:95156769[	.	LOWSUPPORT	END=95156769;Callers=svaba;NumCallers=1;CHR2=5;SVTYPE=DEL;SVLEN=397;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=519027:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_5_95133501_95158501_31C;svaba_MATENM=0;svaba_SPAN=397;svaba_HOMSEQ=TGCACTCCAGCCTGGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.4:0:0:0,10.2,112.2:10.2:0:0:37	22.85:0:5:0,22.6,396:22.6:5:7.315:140
5	117309153	.	N	]5:117309425]N	.	LOWSUPPORT	END=117309425;Callers=svaba;NumCallers=1;CHR2=5;SVTYPE=DUP;SVLEN=272;STRANDS=-+;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=529697:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=5:117309153(-)-5:117309425(+)__5_117306001_117331001D;svaba_MATENM=-1;svaba_SPAN=272;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	17.15:0:0:0,16.8,184.8:16.8:0:0:61	13.51:12:0:0,13.3,501.7:13.3:12:20.6:189
5	118300803	.	N	N[5:118301090[	.	LOWSUPPORT	END=118301090;Callers=svaba;NumCallers=1;CHR2=5;SVTYPE=DEL;SVLEN=287;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=530251:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_5_118286001_118311001_33C;svaba_MATENM=1;svaba_SPAN=287;svaba_HOMSEQ=CTGCCCGGCCGCCACCCCGTCTGGGAGGTG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	14.05:0:0:0,13.8,151.8:13.8:0:0:50	19.9:0:7:0,19.6,422.5:19.6:7:11:153
5	122919229	.	N	N]15:42057194]	.	PASS	END=42057194;Callers=svaba,gridss;NumCallers=2;CHR2=15;SVTYPE=TRA;STRANDS=++;gridss_REF=117;gridss_ASQ=1593.71;gridss_ASRP=54;gridss_ASSR=34;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=1507.92;gridss_BSC=31;gridss_BSCQ=480.68;gridss_BUM=32;gridss_BUMQ=1027.24;gridss_BVF=5;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=210.96;gridss_REFPAIR=46;gridss_RP=15;gridss_RPQ=243.42;gridss_SR=2;gridss_SRQ=31.06;gridss_VF=58;gridss_AS=1;gridss_BA=0;gridss_BEID=asm100-62835,asm235-38337;gridss_BEIDH=0,557;gridss_BEIDL=26,0;gridss_CAS=0;gridss_CQ=2079.16;gridss_EVENT=gridss100_6704;gridss_IHOMPOS=0,0;gridss_PARID=gridss100_6704o;gridss_RAS=1;gridss_SB=0.58209;gridss_SC=562M1X;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=532644:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_5_122916501_122941501_80C;svaba_MATENM=6;svaba_SPAN=-1;svaba_INSERTION=CAA;svaba_EVDNC=ASDIS	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	36:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:17:0:0:0:0:0:6.746:0:0:0,6.6,72.6:6.6:0:0:24	81:1593.71:54:34:0:0:0:0:0:0:0:1480.43:31:480.68:31:999.75:4:0:0:0:2079.16:210.96:29:15:243.42:2:31.06:58:-99.93:7:33:100.1,0,96.8:96.8:37:99.93:79
5	124052572	.	N	N[5:124052931[	.	LOWSUPPORT	END=124052931;Callers=svaba;NumCallers=1;CHR2=5;SVTYPE=DEL;SVLEN=359;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=532955:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_5_124043501_124068501_90C;svaba_MATENM=0;svaba_SPAN=359;svaba_HOMSEQ=GGCGAATCACCTGAGGTCGGGAGTT;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.52:0:0:0,11.4,125.4:11.4:0:0:41	23.06:0:4:0,22.8,369.6:22.8:4:5.605:129
5	164754674	.	N	]5:164754798]N	.	LOWSUPPORT	END=164754798;Callers=svaba;NumCallers=1;CHR2=5;SVTYPE=DUP;SVLEN=124;STRANDS=-+;svaba_NUMPARTS=2;svaba_MATEID=552443:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_5_164738001_164763001_7C;svaba_MATENM=0;svaba_SPAN=124;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	13.49:0:0:0,13.2,145.2:13.2:0:0:48	15.33:0:6:0,15,343.2:15:6:9.557:125
6	3448101	.	N	N[6:3448385[	.	LOWSUPPORT	END=3448385;Callers=svaba;NumCallers=1;CHR2=6;SVTYPE=DEL;SVLEN=284;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=565392:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_6_3430001_3455001_42C;svaba_MATENM=0;svaba_SPAN=284;svaba_HOMSEQ=CCTCGGCCTCCCAAAGTGCTGGGATTACAGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	9.838:0:0:0,9.6,105.6:9.6:0:0:35	8.375:0:7:0,8.1,297:8.1:7:11.97:112
6	28919406	.	N	N[6:28919683[	.	LOWSUPPORT	END=28919683;Callers=svaba;NumCallers=1;CHR2=6;SVTYPE=DEL;SVLEN=277;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=581667:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_6_28910001_28935001_25C;svaba_MATENM=0;svaba_SPAN=277;svaba_HOMSEQ=GTGGCTCACGCCTGTAATCCCAGCACT;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	13.49:0:0:0,13.2,145.2:13.2:0:0:48	25.31:0:4:0,24.9,392.7:24.9:4:5.501:137
6	75785072	.	N	N]6:84551387]	.	PASS	END=84551387;Callers=svaba,gridss,brass;NumCallers=3;CHR2=6;SVTYPE=INV;SVLEN=8766315;STRANDS=++;gridss_REF=107;gridss_ASQ=1487.36;gridss_ASRP=86;gridss_ASSR=100;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=162.4;gridss_BSC=7;gridss_BSCQ=102.65;gridss_BUM=2;gridss_BUMQ=59.74;gridss_BVF=2;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1489.24;gridss_REFPAIR=54;gridss_RP=46;gridss_RPQ=746.49;gridss_SR=43;gridss_SRQ=686.91;gridss_VF=81;gridss_AS=1;gridss_BA=0;gridss_BEID=asm113-107185,asm114-69292;gridss_BEIDH=0,395;gridss_BEIDL=390,0;gridss_CAS=0;gridss_CQ=2920.76;gridss_EVENT=gridss113_10478;gridss_IHOMPOS=-5,0;gridss_PARID=gridss113_10478o;gridss_RAS=1;gridss_SB=0.493333;gridss_SC=151M219D399M1X;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=614091:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=6:75785100(+)-6:84551452(+)__6_84549501_84574501D;svaba_MATENM=-1;svaba_SPAN=8766352;svaba_IMPRECISE;svaba_EVDNC=DSCRD;brass_BAS=94;brass_SVCLASS=inversion;brass_MATEID=1001_1;brass_BKDIST=8766320;brass_TSRDS=A00227:74:HCWC7DSXX:1:1108:16062:11710,A00227:74:HCWC7DSXX:1:1161:29460:20635,A00227:74:HCWC7DSXX:1:1165:2700:13244,A00227:74:HCWC7DSXX:1:1201:7057:17503,A00227:74:HCWC7DSXX:1:1477:21224:34554,A00227:74:HCWC7DSXX:1:1506:15564:7936,A00227:74:HCWC7DSXX:1:1513:2926:7780,A00227:74:HCWC7DSXX:1:1515:26693:11772,A00227:74:HCWC7DSXX:1:1622:30888:15405,A00227:74:HCWC7DSXX:1:1630:19343:24627,A00227:74:HCWC7DSXX:1:1641:24912:22435,A00227:74:HCWC7DSXX:1:1662:1777:19727,A00227:74:HCWC7DSXX:1:1665:21486:17440,A00227:74:HCWC7DSXX:1:2124:10628:7122,A00227:74:HCWC7DSXX:1:2314:28429:7388,A00227:74:HCWC7DSXX:1:2316:18159:8296,A00227:74:HCWC7DSXX:1:2329:17029:21433,A00227:74:HCWC7DSXX:1:2440:26467:16266,A00227:74:HCWC7DSXX:1:2455:24035:9831,A00227:74:HCWC7DSXX:1:2463:6723:13103,A00227:74:HCWC7DSXX:1:2509:3432:22153,A00227:74:HCWC7DSXX:1:2571:4399:2409,A00227:74:HCWC7DSXX:1:2663:9010:30405,A00333:42:HCKYCDSXX:3:1113:16170:8328,A00333:42:HCKYCDSXX:3:1242:25861:3568,A00333:42:HCKYCDSXX:3:1334:30581:28338,A00333:42:HCKYCDSXX:3:1515:19370:33191,A00333:42:HCKYCDSXX:3:1603:32958:31735,A00333:42:HCKYCDSXX:3:1670:27064:30420,A00333:42:HCKYCDSXX:3:2102:11713:33520,A00333:42:HCKYCDSXX:3:2223:15953:30342,A00333:42:HCKYCDSXX:3:2369:30879:7341,A00333:42:HCKYCDSXX:3:2419:5113:12446,A00333:42:HCKYCDSXX:3:2665:10285:10410,A00333:42:HCKYCDSXX:4:1109:13440:28401,A00333:42:HCKYCDSXX:4:1172:7283:10285,A00333:42:HCKYCDSXX:4:1175:29496:1752,A00333:42:HCKYCDSXX:4:1532:29957:2362,A00333:42:HCKYCDSXX:4:1618:26350:36479,A00333:42:HCKYCDSXX:4:1653:19569:2472,A00333:42:HCKYCDSXX:4:1655:16884:1736,A00333:42:HCKYCDSXX:4:2431:2871:8437,A00333:42:HCKYCDSXX:4:2558:26350:6136,A00333:42:HCKYCDSXX:4:2610:17390:2613,A00333:42:HCKYCDSXX:4:2659:7328:10833;brass_TRDS=A00227:74:HCWC7DSXX:1:2275:24117:20055/2,A00227:74:HCWC7DSXX:1:2314:28429:7388/1,A00333:42:HCKYCDSXX:4:1418:2139:36135/1,A00227:74:HCWC7DSXX:1:1327:11704:11835/2,A00333:42:HCKYCDSXX:4:1618:26350:36479/1,A00227:74:HCWC7DSXX:1:1636:27380:19570/1,A00227:74:HCWC7DSXX:1:1335:7283:3771/1,A00227:74:HCWC7DSXX:1:2165:28492:20118/1,A00333:42:HCKYCDSXX:3:1544:12364:35806/2,A00333:42:HCKYCDSXX:4:1544:28149:5901/2,A00333:42:HCKYCDSXX:3:2102:11713:33520/2,A00227:74:HCWC7DSXX:1:1165:2700:13244/2,A00227:74:HCWC7DSXX:1:1665:21486:17440/1,A00227:74:HCWC7DSXX:1:2316:18159:8296/1,A00227:74:HCWC7DSXX:1:2571:4399:2409/1,A00227:74:HCWC7DSXX:1:1504:10004:12085/2,A00227:74:HCWC7DSXX:1:1478:26377:26349/1,A00227:74:HCWC7DSXX:1:1519:30987:23813/1,A00333:42:HCKYCDSXX:3:2256:32850:8688/1,A00227:74:HCWC7DSXX:1:1242:22028:24111/1,A00227:74:HCWC7DSXX:1:1304:17472:16094/1,A00333:42:HCKYCDSXX:4:2451:12671:31516/1,A00227:74:HCWC7DSXX:1:1477:21224:34554/2,A00333:42:HCKYCDSXX:4:1640:30427:20525/1,A00333:42:HCKYCDSXX:4:2238:6189:9862/1,A00227:74:HCWC7DSXX:1:2238:32940:21183/2,A00227:74:HCWC7DSXX:1:2472:26503:22592/2,A00333:42:HCKYCDSXX:4:2558:26350:6136/1,A00227:74:HCWC7DSXX:1:2124:10628:7122/2,A00227:74:HCWC7DSXX:1:2349:1380:32315/1,A00333:42:HCKYCDSXX:4:1175:21269:20384/2,A00227:74:HCWC7DSXX:1:2455:24035:9831/2,A00227:74:HCWC7DSXX:1:2371:28094:19836/1,A00227:74:HCWC7DSXX:1:2347:21847:16250/1,A00227:74:HCWC7DSXX:1:2316:24478:33708/2	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	42:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:30:0:0:0:0:0:5.341:0:0:0,5.1,56.1:5.1:0:0:19:0:0	65:1487.36:86:100:0:0:0:0:0:0:0:134.9:7:102.65:1:32.25:1:0:0:0:4410:1489.24:24:46:746.49:43:686.91:81:-99.02:33:0:99,9,0:9:33:99.02:33:45:35
6	83901649	.	N	N[6:83901923[	.	LOWSUPPORT	END=83901923;Callers=svaba;NumCallers=1;CHR2=6;SVTYPE=DEL;SVLEN=274;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=613835:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_6_83888001_83913001_78C;svaba_MATENM=0;svaba_SPAN=274;svaba_HOMSEQ=GCAGTGAGCCGAGATCGCGCCACTGCACTCCAG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	9.276:0:0:0,9,99:9:0:0:33	11.82:0:8:0,11.4,363:11.4:8:13.46:136
6	100802581	.	N	[15:47507329[N	.	LOWSUPPORT	END=47507329;Callers=svaba;NumCallers=1;CHR2=15;SVTYPE=TRA;STRANDS=--;svaba_DISC_MAPQ=255;svaba_NUMPARTS=2;svaba_MATEID=621608:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_6_100793001_100818001_91C;svaba_MATENM=0;svaba_SPAN=-1;svaba_HOMSEQ=A;svaba_EVDNC=ASDIS	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	5.06:0:0:0,4.8,52.8:4.8:0:0:18	-3.993:2:7:4.1,0,165.8:4.1:7:13.55:68
6	134540811	.	N	N[6:134541098[	.	LOWSUPPORT	END=134541098;Callers=svaba;NumCallers=1;CHR2=6;SVTYPE=DEL;SVLEN=287;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=636580:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_6_134529501_134554501_32C;svaba_MATENM=0;svaba_SPAN=287;svaba_HOMSEQ=GAGGCAGGAGAAT;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.4:0:0:0,10.2,112.2:10.2:0:0:37	18.56:0:4:0,18.3,320.1:18.3:4:5.836:113
6	144361430	.	N	N[6:144361743[	.	LOWSUPPORT	END=144361743;Callers=svaba;NumCallers=1;CHR2=6;SVTYPE=DEL;SVLEN=313;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=641078:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_6_144354001_144379001_82C;svaba_MATENM=0;svaba_SPAN=313;svaba_HOMSEQ=GTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.52:0:0:0,11.4,125.4:11.4:0:0:41	18.28:0:4:0,18,316.8:18:4:5.852:112
6	169714512	.	N	]6:169714794]N	.	LOWSUPPORT	END=169714794;Callers=svaba;NumCallers=1;CHR2=6;SVTYPE=DUP;SVLEN=282;STRANDS=-+;svaba_DISC_MAPQ=23;svaba_NUMPARTS=0;svaba_MATEID=656450:1;svaba_MAPQ=23;svaba_NM=-1;svaba_SCTG=6:169714512(-)-6:169714794(+)__6_169711501_169736501D;svaba_MATENM=-1;svaba_SPAN=282;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.24:0:0:0,11.1,122.1:11.1:0:0:40	0.8579:8:0:0,0.6,244.2:0.6:8:14.68:97
6	170473019	.	N	]6:170473799]N	.	LOWSUPPORT	END=170473799;Callers=svaba;NumCallers=1;CHR2=6;SVTYPE=DUP;SVLEN=780;STRANDS=-+;svaba_DISC_MAPQ=28;svaba_NUMPARTS=0;svaba_MATEID=657122:1;svaba_MAPQ=28;svaba_NM=-1;svaba_SCTG=6:170473019(-)-6:170473799(+)__6_170471001_170496001D;svaba_MATENM=-1;svaba_SPAN=780;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.81:0:0:0,11.7,128.7:11.7:0:0:42	-30.96:19:0:31.1,0,252.2:31.1:19:41.13:113
7	460410	.	N	N[7:460883[	.	LOWSUPPORT	END=460883;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=473;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=658196:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_7_441001_466001_117C;svaba_MATENM=0;svaba_SPAN=473;svaba_HOMSEQ=GCCCCCCGCCCA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.93:0:0:0,12.6,138.6:12.6:0:0:46	42.17:0:4:0,41.8,577.6:41.8:4:4.873:197
7	730652	.	N	N[7:730867[	.	LOWSUPPORT	END=730867;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=215;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=658216:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_7_710501_735501_47C;svaba_MATENM=0;svaba_SPAN=215;svaba_HOMSEQ=CTGCAAATCCTACCCGAAGGGTCCCGCGCCCACCCA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.65:0:0:0,12.6,138.6:12.6:0:0:45	32.69:0:5:0,32.5,505:32.5:5:6.829:175
7	1099354	.	N	]7:1099704]N	.	LOWSUPPORT	END=1099704;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DUP;SVLEN=350;STRANDS=-+;svaba_DISC_MAPQ=18;svaba_NUMPARTS=0;svaba_MATEID=659200:1;svaba_MAPQ=18;svaba_NM=-1;svaba_SCTG=7:1099354(-)-7:1099704(+)__7_1078001_1103001D;svaba_MATENM=-1;svaba_SPAN=350;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.12:0:0:0,9.9,108.9:9.9:0:0:36	16.11:9:0:0,16,442.3:16:9:14.89:163
7	7583516	.	N	N[7:7585033[	.	LOWSUPPORT	END=7585033;Callers=brass;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=1517;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=1076_1;brass_BKDIST=1516;brass_OCC=1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1225:4960:16250,A00227:74:HCWC7DSXX:1:1506:18466:18850,A00227:74:HCWC7DSXX:1:2237:13847:11318,A00227:74:HCWC7DSXX:1:2572:21441:24251,A00333:42:HCKYCDSXX:3:1151:14678:12258,A00333:42:HCKYCDSXX:4:2211:26793:18051,A00333:42:HCKYCDSXX:4:2261:10429:28980,A00333:42:HCKYCDSXX:4:2672:8910:7717	brass_PS:brass_RC	0:0	8:0
7	12684402	.	N	N[7:12684671[	.	LOWSUPPORT	END=12684671;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=269;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=667473:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_7_12666501_12691501_66C;svaba_MATENM=1;svaba_SPAN=269;svaba_HOMSEQ=GCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.52:0:0:0,11.4,125.4:11.4:0:0:41	34.58:0:4:0,34.3,495.1:34.3:4:5.127:170
7	23727543	.	N	N[7:23727918[	.	LOWSUPPORT	END=23727918;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=375;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=672700:1;svaba_MAPQ=60;svaba_NM=2;svaba_SCTG=c_7_23716001_23741001_47C;svaba_MATENM=0;svaba_SPAN=375;svaba_HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	9.276:0:0:0,9,99:9:0:0:33	31.56:0:5:0,31.3,491.8:31.3:5:6.879:171
7	26248176	.	N	N[7:26251705[	.	LOWSUPPORT	END=26251705;Callers=brass;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=3529;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=1093_1;brass_BKDIST=3528;brass_FFV=720;brass_OCC=1;brass_SID=CBX3;brass_GENE=CBX3;brass_TID=ENST00000337620;brass_AS=1;brass_RGN=exon;brass_RGNNO=6;brass_RGNC=6;brass_TSRDS=A00227:74:HCWC7DSXX:1:2244:12997:1329,A00227:74:HCWC7DSXX:1:2603:2383:3991,A00333:42:HCKYCDSXX:3:1169:16161:14920,A00333:42:HCKYCDSXX:3:1464:12183:31328,A00333:42:HCKYCDSXX:4:2176:10917:3490;brass_PH=2	brass_PS:brass_RC	0:0	5:0
7	32774977	.	N	N[7:32777669[	.	LOWSUPPORT	END=32777669;Callers=brass;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=2692;STRANDS=+-;brass_BAS=74;brass_SVCLASS=deletion;brass_MATEID=1102_1;brass_BKDIST=2770;brass_FFV=460;brass_SID=AVL9;brass_GENE=AVL9;brass_TID=ENST00000404479;brass_AS=1;brass_RGN=intron;brass_RGNNO=10;brass_RGNC=12;brass_TSRDS=A00227:74:HCWC7DSXX:1:1522:9344:28447,A00227:74:HCWC7DSXX:1:2245:1298:28792,A00227:74:HCWC7DSXX:1:2272:24532:7341,A00227:74:HCWC7DSXX:1:2345:3161:11537,A00333:42:HCKYCDSXX:3:2237:10890:5478,A00333:42:HCKYCDSXX:4:2628:20329:6731;brass_TRDS=A00333:42:HCKYCDSXX:4:1574:31304:17065/1,A00227:74:HCWC7DSXX:1:1662:9805:36761/2,A00227:74:HCWC7DSXX:1:2174:16043:23328/1,A00227:74:HCWC7DSXX:1:2245:1298:28792/2,A00227:74:HCWC7DSXX:1:2617:17400:14184/1,A00227:74:HCWC7DSXX:1:1471:17327:24424/1,A00227:74:HCWC7DSXX:1:1526:32985:36010/1,A00333:42:HCKYCDSXX:3:2237:10890:5478/1,A00227:74:HCWC7DSXX:1:2345:3161:11537/1,A00333:42:HCKYCDSXX:4:1516:2736:18161/1,A00227:74:HCWC7DSXX:1:1522:9344:28447/2,A00227:74:HCWC7DSXX:1:1104:14226:4116/2,A00227:74:HCWC7DSXX:1:2540:15754:33630/1,A00227:74:HCWC7DSXX:1:2260:9733:24862/1,A00227:74:HCWC7DSXX:1:2226:3323:16423/1,A00227:74:HCWC7DSXX:1:1415:8775:7639/2,A00333:42:HCKYCDSXX:3:2569:26431:30389/1,A00227:74:HCWC7DSXX:1:1159:7446:1391/2,A00227:74:HCWC7DSXX:1:2272:24532:7341/2,A00333:42:HCKYCDSXX:3:2569:27977:30906/1,A00227:74:HCWC7DSXX:1:1276:11803:14638/2,A00227:74:HCWC7DSXX:1:1101:21079:16611/2,A00227:74:HCWC7DSXX:1:1360:2293:31923/2,A00227:74:HCWC7DSXX:1:2240:28556:8296/1,A00333:42:HCKYCDSXX:4:1405:6659:6449/1,A00227:74:HCWC7DSXX:1:1342:14570:11569/2,A00227:74:HCWC7DSXX:1:2174:15374:23109/1,A00333:42:HCKYCDSXX:3:2555:2591:28307/1,A00333:42:HCKYCDSXX:3:2150:23041:35665/2,A00227:74:HCWC7DSXX:1:2451:29179:4679/1,A00227:74:HCWC7DSXX:1:2260:11496:1297/1;brass_NRDS=A00333:42:HCKYCDSXX:4:2259:15899:9674/1,A00333:42:HCKYCDSXX:3:2269:21965:12226/1,A00333:42:HCKYCDSXX:4:2249:10628:6402/2,A00333:42:HCKYCDSXX:4:1455:14950:32236/2,A00333:42:HCKYCDSXX:4:2259:17924:35540/2,A00333:42:HCKYCDSXX:3:1539:30599:4820/2,A00333:42:HCKYCDSXX:3:1243:10682:35023/1,A00333:42:HCKYCDSXX:4:1259:19840:26866/2,A00333:42:HCKYCDSXX:3:2255:27905:27712/2,A00333:42:HCKYCDSXX:4:2258:14660:16642/1,A00333:42:HCKYCDSXX:4:2510:31385:18646/1,A00333:42:HCKYCDSXX:4:2578:28583:36620/1,A00333:42:HCKYCDSXX:3:1266:14308:33599/1,A00333:42:HCKYCDSXX:3:1622:16767:16063/1,A00333:42:HCKYCDSXX:4:1371:30680:19085/1,A00333:42:HCKYCDSXX:3:2269:22480:32659/1	brass_PS:brass_RC	0:0	6:31
7	44652530	.	N	N[7:44652810[	.	LOWSUPPORT	END=44652810;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=280;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=684577:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_7_44639001_44664001_106C;svaba_MATENM=0;svaba_SPAN=280;svaba_HOMSEQ=TGTCGCCCAGGCTGGA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.12:0:0:0,9.9,108.9:9.9:0:0:36	39.64:0:4:0,39.4,551.2:39.4:4:4.954:188
7	62680596	.	N	[7:62983413[N	.	LOWSUPPORT	END=62983413;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=INV;SVLEN=302817;STRANDS=--;svaba_DISC_MAPQ=48;svaba_NUMPARTS=0;svaba_MATEID=694571:1;svaba_MAPQ=48;svaba_NM=-1;svaba_SCTG=7:62680596(-)-7:62983413(-)__7_62671001_62696001D;svaba_MATENM=-1;svaba_SPAN=302817;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	6.184:0:0:0,6,66:6:0:0:22	-15.16:12:0:15.2,0,203.3:15.2:12:24.85:87
7	64504799	.	N	N[7:64505232[	.	LOWSUPPORT	END=64505232;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=433;STRANDS=+-;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=697230:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_7_64484001_64509001_151C;svaba_MATENM=0;svaba_SPAN=433;svaba_SUBN=1;svaba_HOMSEQ=TCACGCCTGTAATCCCAGCACTTTGGGAGGC;svaba_EVDNC=ASDIS	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.24:0:0:0,11.1,122.1:11.1:0:0:40	24.33:5:2:0,24.1,442.3:24.1:6:8.956:157
7	65422240	.	N	N[7:65422563[	.	LOWSUPPORT	END=65422563;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=323;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=697815:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_7_65415001_65440001_78C;svaba_MATENM=0;svaba_SPAN=323;svaba_HOMSEQ=TAATCCCAGCACTTTGGGAGGCCGAGGCGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.96:0:0:0,10.8,118.8:10.8:0:0:39	20.25:0:8:0,20.2,458.8:20.2:8:12.76:166
7	66598522	.	N	N]7:72143735]	.	LOWSUPPORT	END=72143735;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=INV;SVLEN=5545213;STRANDS=++;svaba_DISC_MAPQ=33;svaba_NUMPARTS=0;svaba_MATEID=703947:1;svaba_MAPQ=33;svaba_NM=-1;svaba_SCTG=7:66598522(+)-7:72143735(+)__7_72128001_72153001D;svaba_MATENM=-1;svaba_SPAN=5545213;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.308:0:0:0,7.2,79.2:7.2:0:0:26	-9.189:9:0:9.2,0,174.2:9.2:9:18.17:73
7	66598732	.	N	[7:72143459[N	.	LOWSUPPORT	END=72143459;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=INV;SVLEN=5544727;STRANDS=--;svaba_DISC_MAPQ=23;svaba_NUMPARTS=0;svaba_MATEID=703948:1;svaba_MAPQ=23;svaba_NM=-1;svaba_SCTG=7:66598732(-)-7:72143459(-)__7_72128001_72153001D;svaba_MATENM=-1;svaba_SPAN=5544727;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.308:0:0:0,7.2,79.2:7.2:0:0:26	-11.86:11:0:11.9,0,206.6:11.9:11:22.33:87
7	66633341	.	N	[7:72109067[N	.	LOWSUPPORT	END=72109067;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=INV;SVLEN=5475726;STRANDS=--;svaba_DISC_MAPQ=47;svaba_NUMPARTS=0;svaba_MATEID=703863:1;svaba_MAPQ=47;svaba_NM=-1;svaba_SCTG=7:66633341(-)-7:72109067(-)__7_72103501_72128501D;svaba_MATENM=-1;svaba_SPAN=5475726;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.871:0:0:0,7.8,85.8:7.8:0:0:28	-13.47:12:0:13.7,0,218.3:13.7:12:24.48:93
7	66690367	.	N	N]7:72053331]	.	LOWSUPPORT	END=72053331;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=INV;SVLEN=5362964;STRANDS=++;svaba_DISC_MAPQ=30;svaba_NUMPARTS=0;svaba_MATEID=703760:1;svaba_MAPQ=30;svaba_NM=-1;svaba_SCTG=7:66690367(+)-7:72053331(+)__7_72030001_72055001D;svaba_MATENM=-1;svaba_SPAN=5362964;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	5.06:0:0:0,4.8,52.8:4.8:0:0:18	-0.8287:8:0:1.1,0,225.5:1.1:8:14.91:91
7	69030480	.	N	N[7:69030792[	.	LOWSUPPORT	END=69030792;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=312;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=701827:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_7_69016501_69041501_57C;svaba_MATENM=0;svaba_SPAN=312;svaba_HOMSEQ=CACCCAGGCTGGAGTGCA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	9.557:0:0:0,9.3,102.3:9.3:0:0:34	26.57:0:6:0,26.5,468.7:26.5:6:8.825:165
7	71236045	.	N	N[7:71236316[	.	LOWSUPPORT	END=71236316;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=271;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=702990:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_7_71221501_71246501_101C;svaba_MATENM=0;svaba_SPAN=271;svaba_HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	13.49:0:0:0,13.2,145.2:13.2:0:0:48	42.45:0:4:0,42.1,580.9:42.1:4:4.864:198
7	72325250	.	N	N[7:72325652[	.	LOWSUPPORT	END=72325652;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=402;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=704463:1;svaba_MAPQ=36;svaba_NM=0;svaba_SCTG=c_7_72324001_72349001_93C;svaba_MATENM=0;svaba_SPAN=402;svaba_HOMSEQ=CCCAGGCTGGAGTGCAG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.65:0:0:0,12.6,138.6:12.6:0:0:45	38.8:0:4:0,38.5,541.3:38.5:4:4.981:185
7	76084442	.	N	N]7:76251200]	.	LOWSUPPORT	END=76251200;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=INV;SVLEN=166758;STRANDS=++;svaba_DISC_MAPQ=42;svaba_NUMPARTS=0;svaba_MATEID=709753:1;svaba_MAPQ=42;svaba_NM=-1;svaba_SCTG=7:76084442(+)-7:76251200(+)__7_76244001_76269001D;svaba_MATENM=-1;svaba_SPAN=166758;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	3.092:0:0:0,3,33:3:0:0:11	-30.55:13:0:30.5,0,80:30.5:13:31.78:44
7	76253592	.	N	[7:76579946[N	.	LOWSUPPORT	END=76579946;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=INV;SVLEN=326354;STRANDS=--;svaba_DISC_MAPQ=16;svaba_NUMPARTS=0;svaba_MATEID=709776:1;svaba_MAPQ=16;svaba_NM=-1;svaba_SCTG=7:76253592(-)-7:76579946(-)__7_76244001_76269001D;svaba_MATENM=-1;svaba_SPAN=326354;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	4.216:0:0:0,4.2,46.2:4.2:0:0:15	-25.77:13:0:26,0,125:26:13:29.63:61
7	77331239	.	N	N[7:77331530[	.	LOWSUPPORT	END=77331530;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=291;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=710600:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_7_77322001_77347001_8C;svaba_MATENM=0;svaba_SPAN=291;svaba_HOMSEQ=GCCTTGGCCTCCCAAAGTGCTGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	13.49:0:0:0,13.2,145.2:13.2:0:0:48	39.08:0:4:0,38.8,544.6:38.8:4:4.972:186
7	79741338	.	N	N[7:79741814[	.	LOWSUPPORT	END=79741814;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=476;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=712191:1;svaba_MAPQ=60;svaba_NM=2;svaba_SCTG=c_7_79723001_79748001_121C;svaba_MATENM=0;svaba_SPAN=476;svaba_HOMSEQ=CCAGCTACTCAGGAGGCTGA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.871:0:0:0,7.8,85.8:7.8:0:0:28	26.5:0:5:0,26.2,435.7:26.2:5:7.121:153
7	100554086	.	N	[20:39637604[N	.	LOWSUPPORT	END=39637604;Callers=brass;NumCallers=1;CHR2=20;SVTYPE=TRA;STRANDS=--;brass_SVCLASS=translocation;brass_MATEID=1213_2;brass_BKDIST=-1;brass_BALS=1214_1|1214_2;brass_OCC=2;brass_TSRDS=A00227:74:HCWC7DSXX:1:1336:23185:22983,A00227:74:HCWC7DSXX:1:1420:17743:3850,A00227:74:HCWC7DSXX:1:1507:9444:28338,A00227:74:HCWC7DSXX:1:2445:2926:5932,A00333:42:HCKYCDSXX:3:1502:12310:32831,A00333:42:HCKYCDSXX:3:1559:14082:3677;brass_SID=MUC3A;brass_GENE=MUC3A;brass_TID=ENST00000319509;brass_AS=1;brass_EPH=1;brass_RGN=intron;brass_RGNNO=2;brass_RGNC=11	brass_PS:brass_RC	0:0	6:0
7	100554097	.	N	N]20:39637774]	.	LOWSUPPORT	END=39637774;Callers=brass;NumCallers=1;CHR2=20;SVTYPE=TRA;STRANDS=++;brass_SVCLASS=translocation;brass_MATEID=1214_2;brass_BKDIST=-1;brass_BALS=1213_1|1213_2;brass_OCC=2;brass_TSRDS=A00227:74:HCWC7DSXX:1:1177:24460:20024,A00227:74:HCWC7DSXX:1:1426:14290:34475,A00227:74:HCWC7DSXX:1:2253:30373:18176,A00227:74:HCWC7DSXX:1:2558:6524:28761,A00333:42:HCKYCDSXX:3:1454:26901:4335,A00333:42:HCKYCDSXX:3:1524:27037:21355,A00333:42:HCKYCDSXX:3:2323:8929:34616,A00333:42:HCKYCDSXX:3:2551:17427:8406,A00333:42:HCKYCDSXX:4:1258:8666:27117;brass_SID=MUC3A;brass_GENE=MUC3A;brass_TID=ENST00000319509;brass_AS=1;brass_EPH=1;brass_RGN=intron;brass_RGNNO=2;brass_RGNC=11	brass_PS:brass_RC	0:0	9:0
7	112337270	.	N	N[7:112337462[	.	LOWSUPPORT	END=112337462;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=192;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=731221:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_7_112332501_112357501_71C;svaba_MATENM=0;svaba_SPAN=192;svaba_HOMSEQ=GAGGGGCTCCTCACTTCCCAGA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	13.77:0:0:0,13.5,148.5:13.5:0:0:49	32.12:0:5:0,31.9,498.4:31.9:5:6.854:173
7	154951532	.	N	]7:154951801]N	.	LOWSUPPORT	END=154951801;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DUP;SVLEN=269;STRANDS=-+;svaba_DISC_MAPQ=27;svaba_NUMPARTS=0;svaba_MATEID=756884:1;svaba_MAPQ=27;svaba_NM=-1;svaba_SCTG=7:154951532(-)-7:154951801(+)__7_154938001_154963001D;svaba_MATENM=-1;svaba_SPAN=269;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	4.779:0:0:0,4.5,49.5:4.5:0:0:17	-25.49:13:0:25.7,0,128:25.7:13:29.53:62
7	155138603	.	N	N[7:155138981[	.	LOWSUPPORT	END=155138981;Callers=svaba;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=378;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=757133:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_7_155134001_155159001_11C;svaba_MATENM=0;svaba_SPAN=378;svaba_HOMSEQ=AGAAAGCACCCCCATAGAGAG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	4.851:0:1:0,4.8,82.5:4.8:1:1.448:29	-47.32:0:26:47.6,0,295.1:47.6:26:57.79:137
7	157880688	.	N	N[7:157882482[	.	LOWSUPPORT	END=157882482;Callers=brass;NumCallers=1;CHR2=7;SVTYPE=DEL;SVLEN=1794;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=1293_1;brass_BKDIST=1793;brass_FFV=460;brass_OCC=1;brass_SID=PTPRN2;brass_GENE=PTPRN2;brass_TID=ENST00000389413;brass_AS=-1;brass_EPH=2;brass_RGN=intron;brass_RGNNO=9;brass_RGNC=22;brass_TSRDS=A00227:74:HCWC7DSXX:1:1165:29405:27837,A00227:74:HCWC7DSXX:1:1659:24623:33207,A00227:74:HCWC7DSXX:1:1671:17345:18004,A00227:74:HCWC7DSXX:1:2232:1750:23970,A00333:42:HCKYCDSXX:4:2219:1081:4961,A00333:42:HCKYCDSXX:4:2236:26386:21292,A00333:42:HCKYCDSXX:4:2360:6668:34053;brass_PH=2	brass_PS:brass_RC	0:0	7:0
8	126658874	.	N	]12:74754391]N	.	PASS	END=74754391;Callers=gridss,brass;NumCallers=2;CHR2=12;SVTYPE=TRA;STRANDS=-+;gridss_REF=173;gridss_ASQ=662.46;gridss_ASRP=53;gridss_ASSR=0;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=1633.12;gridss_BSC=32;gridss_BSCQ=541.38;gridss_BUM=34;gridss_BUMQ=1091.74;gridss_BVF=32;gridss_CASQ=484.99;gridss_IC=0;gridss_IQ=0;gridss_RASQ=113.18;gridss_REFPAIR=83;gridss_RP=5;gridss_RPQ=81.14;gridss_SR=0;gridss_SRQ=0;gridss_VF=42;gridss_AS=1;gridss_BA=0;gridss_BEID=asm152-157977,asm202-141861,asm202-141862;gridss_BEIDH=371,520,591;gridss_BEIDL=0,770,0;gridss_CAS=1;gridss_CQ=1341.77;gridss_EVENT=gridss152_34008;gridss_IHOMPOS=0,0;gridss_PARID=gridss152_34008o;gridss_RAS=1;gridss_SB=0.54375;gridss_SC=408M1X;brass_SVCLASS=translocation;brass_MATEID=1342_2;brass_BKDIST=-1;brass_OCC=3;brass_SID=RP11-81H3.2;brass_GENE=RP11-81H3.2;brass_TID=ENST00000551726;brass_AS=-1;brass_RGN=UTRintron;brass_RGNNO=2;brass_RGNC=6;brass_TSRDS=A00227:74:HCWC7DSXX:1:1473:8323:22733,A00227:74:HCWC7DSXX:1:1543:2121:11271,A00333:42:HCKYCDSXX:3:1656:29604:4758,A00333:42:HCKYCDSXX:3:1664:31123:11678,A00333:42:HCKYCDSXX:4:1645:4661:17206	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:brass_PS:brass_RC	38:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:30:0:0:0:0:0:0:0	135:662.46:53:0:0:0:0:0:0:0:0:1605.62:32:541.38:33:1064.25:31:484.99:0:0:1341.77:113.18:53:5:81.14:0:0:42:5:0
8	126658944	.	N	[12:67441936[N	.	PASS	END=67441936;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=TRA;STRANDS=--;gridss_REF=217;gridss_ASQ=1431.56;gridss_ASRP=75;gridss_ASSR=93;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=376.27;gridss_BSC=11;gridss_BSCQ=160.03;gridss_BUM=7;gridss_BUMQ=216.24;gridss_BVF=7;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1252.07;gridss_REFPAIR=87;gridss_RP=42;gridss_RPQ=681.58;gridss_SR=40;gridss_SRQ=638.63;gridss_VF=70;gridss_AS=1;gridss_BA=0;gridss_BEID=asm152-157976,asm202-175481;gridss_BEIDH=469,0;gridss_BEIDL=0,471;gridss_CAS=0;gridss_CIPOS=-4,0;gridss_CIRPOS=0,4;gridss_CQ=3971.63;gridss_EVENT=gridss152_44210;gridss_HOMLEN=4;gridss_HOMSEQ=AAAA;gridss_IHOMPOS=-4,0;gridss_PARID=gridss152_44210o;gridss_RAS=1;gridss_SB=0.472222;gridss_SC=1X3N1X464M20D136M;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=1113415:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_67424001_67449001_42C;svaba_MATENM=0;svaba_SPAN=-1;svaba_HOMSEQ=AAAA;svaba_EVDNC=ASDIS;brass_SVCLASS=translocation;brass_MATEID=1343_2;brass_BKDIST=-1;brass_OCC=3;brass_SID=RP11-123O10.3;brass_GENE=RP11-123O10.3;brass_TID=ENST00000535917;brass_AS=-1;brass_RGN=UTRintron;brass_RGNNO=3;brass_RGNC=5;brass_TSRDS=A00227:74:HCWC7DSXX:1:1150:21486:22482,A00227:74:HCWC7DSXX:1:1163:3522:29543,A00227:74:HCWC7DSXX:1:1173:16224:22294,A00227:74:HCWC7DSXX:1:1207:23131:29496,A00227:74:HCWC7DSXX:1:1216:22779:26913,A00227:74:HCWC7DSXX:1:1330:23628:10379,A00227:74:HCWC7DSXX:1:1424:7265:36370,A00227:74:HCWC7DSXX:1:1468:22498:8422,A00227:74:HCWC7DSXX:1:1524:3405:25551,A00227:74:HCWC7DSXX:1:1534:5285:21574,A00227:74:HCWC7DSXX:1:1553:25925:3959,A00227:74:HCWC7DSXX:1:2150:17598:18098,A00227:74:HCWC7DSXX:1:2208:2076:3834,A00227:74:HCWC7DSXX:1:2226:20347:12868,A00227:74:HCWC7DSXX:1:2230:16920:26694,A00227:74:HCWC7DSXX:1:2275:27651:31532,A00227:74:HCWC7DSXX:1:2312:17354:32049,A00227:74:HCWC7DSXX:1:2322:17689:32878,A00227:74:HCWC7DSXX:1:2350:15908:28823,A00227:74:HCWC7DSXX:1:2405:9263:13213,A00227:74:HCWC7DSXX:1:2475:1823:14137,A00227:74:HCWC7DSXX:1:2515:6804:9737,A00227:74:HCWC7DSXX:1:2534:32913:16094,A00227:74:HCWC7DSXX:1:2604:10402:21136,A00227:74:HCWC7DSXX:1:2604:31991:7451,A00227:74:HCWC7DSXX:1:2617:18240:31673,A00333:42:HCKYCDSXX:3:1237:31819:29450,A00333:42:HCKYCDSXX:3:1508:30427:21026,A00333:42:HCKYCDSXX:3:1609:23032:18865,A00333:42:HCKYCDSXX:3:1650:19190:30311,A00333:42:HCKYCDSXX:3:2110:28375:6605,A00333:42:HCKYCDSXX:3:2203:16468:5807,A00333:42:HCKYCDSXX:3:2304:26115:10363,A00333:42:HCKYCDSXX:3:2566:17146:31908,A00333:42:HCKYCDSXX:4:1301:27335:5368,A00333:42:HCKYCDSXX:4:1656:12572:2347,A00333:42:HCKYCDSXX:4:2144:12879:36761,A00333:42:HCKYCDSXX:4:2241:14290:19069,A00333:42:HCKYCDSXX:4:2247:13865:2675,A00333:42:HCKYCDSXX:4:2317:12454:17112,A00333:42:HCKYCDSXX:4:2416:11071:19100,A00333:42:HCKYCDSXX:4:2610:26205:1908	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	54:0:0:0:0:0:0:0:0:0:0:54.99:0:0:2:54.99:2:0:0:0:0:0:28:0:0:0:0:0:7.59:0:0:0,7.5,82.5:7.5:0:0:27:0:0	163:1431.56:75:93:0:0:0:0:0:0:0:321.28:11:160.03:5:161.25:5:0:0:0:4003.84:1252.07:59:42:681.58:40:638.63:70:-195.4:27:48:191,0,49.1:49.1:66:195.4:96:42:0
8	126658945	.	N	N]12:74753321]	.	PASS	END=74753321;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=TRA;STRANDS=++;gridss_REF=212;gridss_ASQ=2162.54;gridss_ASRP=79;gridss_ASSR=126;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=964.1;gridss_BSC=9;gridss_BSCQ=130.36;gridss_BUM=26;gridss_BUMQ=833.74;gridss_BVF=3;gridss_CASQ=243.21;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1226.56;gridss_REFPAIR=80;gridss_RP=17;gridss_RPQ=275.88;gridss_SR=55;gridss_SRQ=868.3;gridss_VF=85;gridss_AS=1;gridss_BA=0;gridss_BEID=asm152-14240,asm202-141861,asm202-141862;gridss_BEIDH=0,520,591;gridss_BEIDL=68,0,659;gridss_CAS=1;gridss_CIPOS=-4,0;gridss_CIRPOS=0,4;gridss_CQ=4776.49;gridss_EVENT=gridss152_932;gridss_HOMLEN=4;gridss_HOMSEQ=AATT;gridss_IHOMPOS=-4,0;gridss_PARID=gridss152_932o;gridss_RAS=1;gridss_SB=0.522523;gridss_SC=515M1X3N1X;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=1117882:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=8:126659024(+)-12:74753315(+)__12_74749501_74774501D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD;brass_BAS=80;brass_SVCLASS=translocation;brass_MATEID=1341_2;brass_HOMSEQ=AATT;brass_IMPRECISE;brass_CIPOS=0,4;brass_CIEND=4,0;brass_HOMLEN=4;brass_BKDIST=-1;brass_SID=RP11-81H3.2;brass_GENE=RP11-81H3.2;brass_TID=ENST00000551726;brass_AS=-1;brass_RGN=UTRintron;brass_RGNNO=2;brass_RGNC=6;brass_TSRDS=A00227:74:HCWC7DSXX:1:1174:17481:35149,A00227:74:HCWC7DSXX:1:1233:2474:10848,A00227:74:HCWC7DSXX:1:1625:2211:1031,A00227:74:HCWC7DSXX:1:2124:15058:22153,A00227:74:HCWC7DSXX:1:2434:22299:11835,A00227:74:HCWC7DSXX:1:2553:29017:23500,A00227:74:HCWC7DSXX:1:2608:28655:7874,A00227:74:HCWC7DSXX:1:2609:32081:1689,A00333:42:HCKYCDSXX:3:1660:7943:13025,A00333:42:HCKYCDSXX:3:2310:14859:20588,A00333:42:HCKYCDSXX:3:2439:21395:32221,A00333:42:HCKYCDSXX:3:2445:26720:29637,A00333:42:HCKYCDSXX:4:1224:26549:7388,A00333:42:HCKYCDSXX:4:2222:11243:36871,A00333:42:HCKYCDSXX:4:2410:3965:10895,A00333:42:HCKYCDSXX:4:2418:23104:11318,A00333:42:HCKYCDSXX:4:2418:23619:10895;brass_TRDS=A00227:74:HCWC7DSXX:1:2417:15863:5008/2,A00333:42:HCKYCDSXX:4:1515:10511:3662/1,A00227:74:HCWC7DSXX:1:1429:4987:7686/2,A00333:42:HCKYCDSXX:3:1333:31991:1376/1,A00227:74:HCWC7DSXX:1:2620:25608:14372/2,A00227:74:HCWC7DSXX:1:2244:1705:25300/1,A00333:42:HCKYCDSXX:4:1224:26549:7388/2,A00333:42:HCKYCDSXX:3:1656:29604:4758/1,A00227:74:HCWC7DSXX:1:1473:8323:22733/1,A00333:42:HCKYCDSXX:4:1224:28013:8015/2,A00227:74:HCWC7DSXX:1:1176:2546:19648/2,A00227:74:HCWC7DSXX:1:2147:9995:16141/2,A00227:74:HCWC7DSXX:1:2454:17906:25739/1,A00227:74:HCWC7DSXX:1:1605:16514:36385/1,A00333:42:HCKYCDSXX:3:1435:11315:35305/2,A00333:42:HCKYCDSXX:4:2465:27010:22717/1,A00227:74:HCWC7DSXX:1:2665:21974:18818/1,A00227:74:HCWC7DSXX:1:2618:2889:13228/2,A00333:42:HCKYCDSXX:4:1645:4661:17206/1,A00227:74:HCWC7DSXX:1:1262:31512:15671/1,A00227:74:HCWC7DSXX:1:1674:19018:7717/2,A00227:74:HCWC7DSXX:1:2464:30074:22795/1,A00227:74:HCWC7DSXX:1:1155:28971:15123/1,A00333:42:HCKYCDSXX:3:1664:31123:11678/1,A00333:42:HCKYCDSXX:3:1527:12717:36667/1,A00333:42:HCKYCDSXX:4:2222:11243:36871/1,A00227:74:HCWC7DSXX:1:2103:5674:11224/2,A00227:74:HCWC7DSXX:1:1543:2121:11271/2,A00227:74:HCWC7DSXX:1:1155:29179:15045/1,A00227:74:HCWC7DSXX:1:1531:24316:33144/2,A00227:74:HCWC7DSXX:1:2464:30373:23406/1,A00333:42:HCKYCDSXX:4:2162:11279:34961/2,A00227:74:HCWC7DSXX:1:1440:7744:36354/1,A00227:74:HCWC7DSXX:1:2143:8567:20995/1,A00227:74:HCWC7DSXX:1:2417:15863:5102/2	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	42:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:27:0:0:0:0:0:5.622:0:0:0,5.4,59.4:5.4:0:0:20:0:0	170:2162.54:79:126:0:0:0:0:0:0:0:936.6:9:130.36:25:806.25:2:243.21:0:0:4776.49:1226.56:53:17:275.88:55:868.3:85:2.054:9:0:0,1.8,287.1:1.8:9:16.37:113:17:35
8	138252426	.	N	N[8:139418964[	.	PASS	END=139418964;Callers=svaba,gridss,brass;NumCallers=3;CHR2=8;SVTYPE=DEL;SVLEN=1166538;STRANDS=+-;gridss_REF=155;gridss_ASQ=922.98;gridss_ASRP=71;gridss_ASSR=85;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=149.17;gridss_BSC=8;gridss_BSCQ=127.17;gridss_BUM=1;gridss_BUMQ=22;gridss_BVF=2;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1926.76;gridss_REFPAIR=61;gridss_RP=24;gridss_RPQ=389.47;gridss_SR=27;gridss_SRQ=431.35;gridss_VF=74;gridss_AS=1;gridss_BA=0;gridss_BEID=asm153-210995,asm153-39369;gridss_BEIDH=0,0;gridss_BEIDL=484,426;gridss_CAS=0;gridss_CIPOS=-4,0;gridss_CIRPOS=-4,0;gridss_CQ=3670.57;gridss_EVENT=gridss153_15686;gridss_HOMLEN=4;gridss_HOMSEQ=AAAA;gridss_IHOMPOS=-4,0;gridss_PARID=gridss153_15686o;gridss_RAS=1;gridss_SB=0.575;gridss_SC=1X3N1X475M;svaba_NUMPARTS=2;svaba_MATEID=833163:1;svaba_MAPQ=53;svaba_NM=0;svaba_SCTG=c_8_139405001_139430001_57C;svaba_MATENM=0;svaba_SPAN=1166538;svaba_HOMSEQ=AAAA;svaba_EVDNC=ASSMB;brass_SVCLASS=deletion;brass_MATEID=1353_1;brass_BKDIST=1166537;brass_OCC=1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1112:31358:35697,A00227:74:HCWC7DSXX:1:1147:15600:9909,A00227:74:HCWC7DSXX:1:1216:6388:28494,A00227:74:HCWC7DSXX:1:1307:17137:26694,A00227:74:HCWC7DSXX:1:1330:18982:7654,A00227:74:HCWC7DSXX:1:1459:23158:32769,A00227:74:HCWC7DSXX:1:1520:1967:36213,A00227:74:HCWC7DSXX:1:1522:18222:11287,A00227:74:HCWC7DSXX:1:1636:11957:31657,A00227:74:HCWC7DSXX:1:1666:25762:34522,A00227:74:HCWC7DSXX:1:2103:23863:36276,A00227:74:HCWC7DSXX:1:2127:4689:33505,A00227:74:HCWC7DSXX:1:2132:18647:30467,A00227:74:HCWC7DSXX:1:2211:15908:19993,A00227:74:HCWC7DSXX:1:2237:8142:13275,A00227:74:HCWC7DSXX:1:2574:31882:14779,A00227:74:HCWC7DSXX:1:2603:4092:35008,A00227:74:HCWC7DSXX:1:2604:20645:20149,A00227:74:HCWC7DSXX:1:2626:22643:17660,A00227:74:HCWC7DSXX:1:2644:17616:28808,A00227:74:HCWC7DSXX:1:2647:16532:4257,A00333:42:HCKYCDSXX:3:1143:14181:10488,A00333:42:HCKYCDSXX:3:1230:28203:21402,A00333:42:HCKYCDSXX:3:1437:14163:15499,A00333:42:HCKYCDSXX:3:1469:7301:15233,A00333:42:HCKYCDSXX:3:1510:25247:12336,A00333:42:HCKYCDSXX:3:2206:28113:17550,A00333:42:HCKYCDSXX:3:2323:27181:21324,A00333:42:HCKYCDSXX:3:2364:8368:26882,A00333:42:HCKYCDSXX:3:2472:12147:18364,A00333:42:HCKYCDSXX:3:2565:2835:32424,A00333:42:HCKYCDSXX:4:1313:5005:25629,A00333:42:HCKYCDSXX:4:1334:3875:36354,A00333:42:HCKYCDSXX:4:1339:25916:8484,A00333:42:HCKYCDSXX:4:1652:23149:35603;brass_SID=FAM135B;brass_GENE=FAM135B;brass_TID=ENST00000395297;brass_AS=-1;brass_RGN=5UTRintron;brass_RGNNO=1;brass_RGNC=20	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	41:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:20:0:0:0:0:0:5.622:0:0:0,5.4,59.4:5.4:0:0:20:0:0	114:922.98:71:85:0:0:0:0:0:0:0:149.17:8:127.17:1:22:2:0:0:0:3670.57:1926.76:41:24:389.47:27:431.35:74:-169.1:0:55:161.9,0,13.4:13.4:55:169.1:70:35:0
8	140768508	.	N	N[8:140769658[	.	LOWSUPPORT	END=140769658;Callers=brass;NumCallers=1;CHR2=8;SVTYPE=DEL;SVLEN=1150;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=1357_1;brass_BKDIST=1149;brass_FFV=460;brass_OCC=1;brass_SID=TRAPPC9;brass_GENE=TRAPPC9;brass_TID=ENST00000389328;brass_AS=-1;brass_EPH=1;brass_RGN=intron;brass_RGNNO=21;brass_RGNC=23;brass_TSRDS=A00227:74:HCWC7DSXX:1:1170:11442:5901,A00227:74:HCWC7DSXX:1:1416:17960:3411,A00227:74:HCWC7DSXX:1:1566:23077:19539,A00227:74:HCWC7DSXX:1:2513:7563:33098;brass_PH=1	brass_PS:brass_RC	0:0	4:0
8	143365276	.	N	N[8:143365452[	.	LOWSUPPORT	END=143365452;Callers=svaba;NumCallers=1;CHR2=8;SVTYPE=DEL;SVLEN=176;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=836004:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_8_143349501_143374501_61C;svaba_MATENM=0;svaba_SPAN=176;svaba_HOMSEQ=CAGAGGCGGGGCCAGTGTCTGTCA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	13.49:0:0:0,13.2,145.2:13.2:0:0:48	39.08:0:4:0,38.8,544.6:38.8:4:4.972:186
8	145288973	.	N	N[8:145289444[	.	LOWSUPPORT	END=145289444;Callers=svaba;NumCallers=1;CHR2=8;SVTYPE=DEL;SVLEN=471;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=837830:1;svaba_MAPQ=60;svaba_NM=3;svaba_SCTG=c_8_145285001_145310001_106C;svaba_MATENM=1;svaba_SPAN=471;svaba_HOMSEQ=GAGTCTTGCTCTGTCTCCCAGGCTGGAGTGCAGTGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	8.433:0:0:0,8.4,92.4:8.4:0:0:30	27.55:0:4:0,27.4,419.2:27.4:4:5.402:145
9	10806	.	N	N]11:134946561]	.	LOWSUPPORT	END=134946561;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=TRA;STRANDS=++;svaba_DISC_MAPQ=32;svaba_NUMPARTS=0;svaba_MATEID=838712:1;svaba_MAPQ=32;svaba_NM=-1;svaba_SCTG=9:10806(+)-11:134946561(+)__9_1_25001D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	3.654:0:0:0,3.6,39.6:3.6:0:0:13	-13.69:9:0:13.7,0,129.2:13.7:9:19.21:57
9	36362905	.	N	N[9:36364080[	.	LOWSUPPORT	END=36364080;Callers=brass;NumCallers=1;CHR2=9;SVTYPE=DEL;SVLEN=1175;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=1388_1;brass_BKDIST=1174;brass_FFV=460;brass_OCC=1;brass_SID=RNF38;brass_GENE=RNF38;brass_TID=ENST00000259605;brass_AS=-1;brass_RGN=intron;brass_RGNNO=4;brass_RGNC=12;brass_TSRDS=A00227:74:HCWC7DSXX:1:1154:8648:36573,A00227:74:HCWC7DSXX:1:1456:3468:6965,A00227:74:HCWC7DSXX:1:1475:29451:26005,A00227:74:HCWC7DSXX:1:1675:17598:7482,A00227:74:HCWC7DSXX:1:2272:6985:13745,A00227:74:HCWC7DSXX:1:2529:16414:9659,A00333:42:HCKYCDSXX:4:1614:20482:12195,A00333:42:HCKYCDSXX:4:2174:30653:5541,A00333:42:HCKYCDSXX:4:2524:20961:11271	brass_PS:brass_RC	0:0	9:0
9	89242792	.	N	N[9:89463698[	.	PASS	END=89463698;Callers=svaba,gridss,brass;NumCallers=3;CHR2=9;SVTYPE=DEL;SVLEN=220906;STRANDS=+-;gridss_REF=131;gridss_ASQ=1614.79;gridss_ASRP=102;gridss_ASSR=95;gridss_BANRP=2;gridss_BANRPQ=32.46;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=205.16;gridss_BSC=9;gridss_BSCQ=145.42;gridss_BUM=2;gridss_BUMQ=59.74;gridss_BVF=1;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1573.68;gridss_REFPAIR=47;gridss_RP=53;gridss_RPQ=860.09;gridss_SR=39;gridss_SRQ=625.72;gridss_VF=84;gridss_AS=1;gridss_BA=0;gridss_BEID=asm163-126645,asm163-4653;gridss_BEIDH=0,0;gridss_BEIDL=490,408;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=0,1;gridss_CQ=4674.28;gridss_EVENT=gridss163_8067;gridss_HOMLEN=1;gridss_HOMSEQ=T;gridss_IHOMPOS=0,1;gridss_PARID=gridss163_8067o;gridss_RAS=1;gridss_SB=0.461538;gridss_SC=2X605M;svaba_NUMPARTS=2;svaba_MATEID=884321:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_9_89449501_89474501_40C;svaba_MATENM=0;svaba_SPAN=220906;svaba_HOMSEQ=T;svaba_EVDNC=ASSMB;brass_BAS=93;brass_SVCLASS=deletion;brass_MATEID=1425_1;brass_HOMSEQ=T;brass_IMPRECISE;brass_CIPOS=0,1;brass_CIEND=0,1;brass_HOMLEN=1;brass_BKDIST=220905;brass_TSRDS=A00227:74:HCWC7DSXX:1:1117:19081:17033,A00227:74:HCWC7DSXX:1:1134:20473:19413,A00227:74:HCWC7DSXX:1:1253:15790:28087,A00227:74:HCWC7DSXX:1:1263:26910:29966,A00227:74:HCWC7DSXX:1:1271:2410:23046,A00227:74:HCWC7DSXX:1:1305:18466:2127,A00227:74:HCWC7DSXX:1:1314:30572:24565,A00227:74:HCWC7DSXX:1:1353:28239:17237,A00227:74:HCWC7DSXX:1:1422:13612:18427,A00227:74:HCWC7DSXX:1:1432:26702:26537,A00227:74:HCWC7DSXX:1:1455:22037:30232,A00227:74:HCWC7DSXX:1:1464:18412:8265,A00227:74:HCWC7DSXX:1:1468:11984:28416,A00227:74:HCWC7DSXX:1:1470:1235:6762,A00227:74:HCWC7DSXX:1:1516:25021:31454,A00227:74:HCWC7DSXX:1:1636:8648:23860,A00227:74:HCWC7DSXX:1:1645:31494:8844,A00227:74:HCWC7DSXX:1:1648:16667:23782,A00227:74:HCWC7DSXX:1:2218:17852:11021,A00227:74:HCWC7DSXX:1:2277:23800:14497,A00227:74:HCWC7DSXX:1:2352:11794:1219,A00227:74:HCWC7DSXX:1:2358:4327:26490,A00227:74:HCWC7DSXX:1:2425:21468:3443,A00227:74:HCWC7DSXX:1:2528:3125:16172,A00227:74:HCWC7DSXX:1:2559:1353:2174,A00227:74:HCWC7DSXX:1:2562:4770:11819,A00227:74:HCWC7DSXX:1:2603:12735:8891,A00227:74:HCWC7DSXX:1:2605:25274:6558,A00227:74:HCWC7DSXX:1:2606:19750:21261,A00227:74:HCWC7DSXX:1:2608:31702:18881,A00227:74:HCWC7DSXX:1:2635:11623:33364,A00227:74:HCWC7DSXX:1:2637:16649:25316,A00227:74:HCWC7DSXX:1:2674:32823:2503,A00333:42:HCKYCDSXX:3:1148:15944:16203,A00333:42:HCKYCDSXX:3:1414:19859:32722,A00333:42:HCKYCDSXX:3:1465:1226:21966,A00333:42:HCKYCDSXX:3:2149:28574:3724,A00333:42:HCKYCDSXX:3:2156:3839:3411,A00333:42:HCKYCDSXX:3:2304:27335:26913,A00333:42:HCKYCDSXX:3:2343:6008:6449,A00333:42:HCKYCDSXX:3:2439:29261:23359,A00333:42:HCKYCDSXX:3:2603:7609:30201,A00333:42:HCKYCDSXX:3:2623:13684:36777,A00333:42:HCKYCDSXX:3:2642:4029:23876,A00333:42:HCKYCDSXX:4:1114:11107:26115,A00333:42:HCKYCDSXX:4:1158:27968:29262,A00333:42:HCKYCDSXX:4:1355:19434:24502,A00333:42:HCKYCDSXX:4:1439:23475:27430,A00333:42:HCKYCDSXX:4:1533:7211:31234,A00333:42:HCKYCDSXX:4:2315:13422:33191,A00333:42:HCKYCDSXX:4:2403:23827:26976,A00333:42:HCKYCDSXX:4:2427:10881:8563,A00333:42:HCKYCDSXX:4:2476:25183:14293,A00333:42:HCKYCDSXX:4:2549:12762:2331;brass_TRDS=A00227:74:HCWC7DSXX:1:2341:6135:12587/2,A00333:42:HCKYCDSXX:4:1653:12933:21762/2,A00227:74:HCWC7DSXX:1:2632:25030:2284/1,A00227:74:HCWC7DSXX:1:1452:18765:4053/1,A00227:74:HCWC7DSXX:1:2104:18819:27258/1,A00227:74:HCWC7DSXX:1:1305:18466:2127/1,A00227:74:HCWC7DSXX:1:1645:32344:9471/2,A00227:74:HCWC7DSXX:1:1645:31494:8844/2,A00333:42:HCKYCDSXX:3:1161:10990:21997/2,A00227:74:HCWC7DSXX:1:2209:5113:8782/2,A00333:42:HCKYCDSXX:3:2304:27335:26913/2,A00333:42:HCKYCDSXX:3:1465:1226:21966/2,A00333:42:HCKYCDSXX:4:2549:12762:2331/1,A00227:74:HCWC7DSXX:1:1253:15790:28087/2,A00227:74:HCWC7DSXX:1:2302:14913:19429/1,A00227:74:HCWC7DSXX:1:2675:26476:22326/1,A00333:42:HCKYCDSXX:3:1538:15799:31485/2,A00227:74:HCWC7DSXX:1:2352:11794:1219/2,A00227:74:HCWC7DSXX:1:2467:20518:22028/1,A00333:42:HCKYCDSXX:3:1161:13322:25692/2,A00227:74:HCWC7DSXX:1:1468:11984:28416/2,A00227:74:HCWC7DSXX:1:2361:9498:30123/1,A00227:74:HCWC7DSXX:1:2358:4327:26490/1,A00227:74:HCWC7DSXX:1:1422:21404:26224/2,A00333:42:HCKYCDSXX:4:2403:23827:26976/1,A00227:74:HCWC7DSXX:1:2361:7907:1532/1,A00333:42:HCKYCDSXX:4:1316:15781:19460/2,A00227:74:HCWC7DSXX:1:1645:32380:9533/2,A00227:74:HCWC7DSXX:1:1314:30572:24565/1,A00227:74:HCWC7DSXX:1:2243:21965:33176/1,A00333:42:HCKYCDSXX:4:1533:7211:31234/2,A00227:74:HCWC7DSXX:1:2674:8477:19711/1,A00227:74:HCWC7DSXX:1:2606:19750:21261/2,A00333:42:HCKYCDSXX:3:1526:24587:15984/1,A00333:42:HCKYCDSXX:4:1426:12536:26553/2	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	50:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:25:0:0:0:0:0:6.465:0:0:0,6.3,69.3:6.3:0:0:23:0:0	81:1614.79:102:95:2:32.46:0:0:0:0:0:177.67:9:145.42:1:32.25:0:0:0:0:4674.28:1573.68:22:53:860.09:39:625.72:84:-168.3:0:53:168.3,15.3,0:15.3:53:168.3:55:54:35
9	94474067	.	N	]9:94474470]N	.	LOWSUPPORT	END=94474470;Callers=svaba;NumCallers=1;CHR2=9;SVTYPE=DUP;SVLEN=403;STRANDS=-+;svaba_DISC_MAPQ=43;svaba_NUMPARTS=0;svaba_MATEID=887447:1;svaba_MAPQ=43;svaba_NM=-1;svaba_SCTG=9:94474067(-)-9:94474470(+)__9_94472001_94497001D;svaba_MATENM=-1;svaba_SPAN=403;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.24:0:0:0,11.1,122.1:11.1:0:0:40	-0.7566:9:0:0.8,0,258.2:0.8:9:16.75:103
9	95448575	.	N	N[9:95448851[	.	LOWSUPPORT	END=95448851;Callers=svaba;NumCallers=1;CHR2=9;SVTYPE=DEL;SVLEN=276;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=887671:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_9_95427501_95452501_79C;svaba_MATENM=0;svaba_SPAN=276;svaba_HOMSEQ=TTGCCCAGGCTGGAGTGCAGTG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	8.714:0:0:0,8.4,92.4:8.4:0:0:31	22.21:0:4:0,21.9,359.7:21.9:4:5.646:126
9	130386811	.	N	N[9:130387142[	.	LOWSUPPORT	END=130387142;Callers=svaba;NumCallers=1;CHR2=9;SVTYPE=DEL;SVLEN=331;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=905607:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_9_130364501_130389501_2C;svaba_MATENM=1;svaba_SPAN=331;svaba_HOMSEQ=GAACCCGGGAGGCAGAGCTTGCAGTGAG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	8.714:0:0:0,8.4,92.4:8.4:0:0:31	12.45:0:5:0,12.3,283.8:12.3:5:7.989:103
9	130626198	.	N	N[9:130626602[	.	LOWSUPPORT	END=130626602;Callers=svaba;NumCallers=1;CHR2=9;SVTYPE=DEL;SVLEN=404;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=905583:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_9_130609501_130634501_39C;svaba_MATENM=0;svaba_SPAN=404;svaba_HOMSEQ=TGGTGGCTCACGCCTGTAATCCCAGCACTTTGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	8.714:0:0:0,8.4,92.4:8.4:0:0:31	19.4:0:4:0,19.2,330:19.2:4:5.791:116
10	966488	.	N	N[10:966953[	.	LOWSUPPORT	END=966953;Callers=svaba;NumCallers=1;CHR2=10;SVTYPE=DEL;SVLEN=465;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=914814:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_10_955501_980501_36C;svaba_MATENM=0;svaba_SPAN=465;svaba_HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.12:0:0:0,9.9,108.9:9.9:0:0:36	19.96:0:4:0,19.8,336.6:19.8:4:5.761:118
10	11407343	.	N	]10:11407680]N	.	LOWSUPPORT	END=11407680;Callers=svaba;NumCallers=1;CHR2=10;SVTYPE=DUP;SVLEN=337;STRANDS=-+;svaba_DISC_MAPQ=42;svaba_NUMPARTS=0;svaba_MATEID=922585:1;svaba_MAPQ=42;svaba_NM=-1;svaba_SCTG=10:11407343(-)-10:11407680(+)__10_11392501_11417501D;svaba_MATENM=-1;svaba_SPAN=337;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.09:0:0:0,12,132:12:0:0:43	-3.568:9:0:3.8,0,228.2:3.8:9:17.17:93
10	13816422	.	N	N[16:4038247[	.	LOWSUPPORT	END=4038247;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=TRA;STRANDS=+-;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=924727:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_10_13793501_13818501_98C;svaba_MATENM=0;svaba_SPAN=-1;svaba_EVDNC=ASDIS	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	6.465:0:0:0,6.3,69.3:6.3:0:0:23	-0.4828:3:4:0.5,0,142.4:0.5:5:9.313:57
10	20582212	.	N	N[10:20616895[	.	PASS	END=20616895;Callers=svaba,brass;NumCallers=2;CHR2=10;SVTYPE=DEL;SVLEN=34683;STRANDS=+-;svaba_DISC_MAPQ=57;svaba_NUMPARTS=2;svaba_MATEID=929160:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_10_20604501_20629501_18C;svaba_MATENM=1;svaba_SPAN=34683;svaba_HOMSEQ=AAG;svaba_EVDNC=ASDIS;brass_SVCLASS=deletion;brass_MATEID=1468_1;brass_BKDIST=34682;brass_OCC=1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1245:16459:7294,A00227:74:HCWC7DSXX:1:1436:28375:35070,A00227:74:HCWC7DSXX:1:1511:30789:14011,A00227:74:HCWC7DSXX:1:1601:18159:23484,A00227:74:HCWC7DSXX:1:2242:13973:24815,A00227:74:HCWC7DSXX:1:2371:19352:10113,A00227:74:HCWC7DSXX:1:2478:6036:34366,A00333:42:HCKYCDSXX:3:1173:18611:35884,A00333:42:HCKYCDSXX:3:1432:29686:27477,A00333:42:HCKYCDSXX:3:2203:5457:32174,A00333:42:HCKYCDSXX:3:2641:26078:18787,A00333:42:HCKYCDSXX:4:1320:11695:10755,A00333:42:HCKYCDSXX:4:1407:31593:3662,A00333:42:HCKYCDSXX:4:2143:27344:3067	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	6.465:0:0:0,6.3,69.3:6.3:0:0:23:0:0	-161.7:28:39:161.7,14.7,0:14.7:53:161.7:50:14:0
10	37357400	.	N	]16:16093639]N	.	LOWSUPPORT	END=16093639;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=TRA;STRANDS=-+;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=1325176:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=10:37357400(-)-16:16093639(+)__16_16072001_16097001D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	5.622:0:0:0,5.4,59.4:5.4:0:0:20	-15.16:8:0:15.2,0,84.5:15.2:8:17.99:40
11	639993	.	N	]11:640273]N	.	LOWSUPPORT	END=640273;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DUP;SVLEN=280;STRANDS=-+;svaba_DISC_MAPQ=17;svaba_NUMPARTS=0;svaba_MATEID=995214:1;svaba_MAPQ=17;svaba_NM=-1;svaba_SCTG=11:639993(-)-11:640273(+)__11_637001_662001D;svaba_MATENM=-1;svaba_SPAN=280;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	16.58:0:0:0,16.5,181.5:16.5:0:0:59	5.637:8:0:0,5.4,297:5.4:8:14.09:114
11	26328667	.	N	N[11:26328986[	.	LOWSUPPORT	END=26328986;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DEL;SVLEN=319;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1011552:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_11_26313001_26338001_93C;svaba_MATENM=0;svaba_SPAN=319;svaba_HOMSEQ=GCCTGTAATCCCAGCACTTTGGGAGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.24:0:0:0,11.1,122.1:11.1:0:0:40	23.62:0:4:0,23.4,376.2:23.4:4:5.578:131
11	61043638	.	N	N[11:61043918[	.	LOWSUPPORT	END=61043918;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DEL;SVLEN=280;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1028886:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_11_61029501_61054501_50C;svaba_MATENM=0;svaba_SPAN=280;svaba_SUBN=3;svaba_HOMSEQ=GGGGGCTCATGCCTGTCATCCCAGCACTTTG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	9.557:0:0:0,9.3,102.3:9.3:0:0:34	25.02:0:4:0,24.6,389.4:24.6:4:5.513:136
11	108457190	.	N	N[11:108457362[	.	LOWSUPPORT	END=108457362;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DEL;SVLEN=172;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1056636:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_11_108437001_108462001_69C;svaba_MATENM=0;svaba_SPAN=172;svaba_HOMSEQ=ATCCCCTTTCCTCCCTCCCCCATCCCCTTTCCTCCCT;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	4.779:0:0:0,4.5,49.5:4.5:0:0:17	-10.53:0:6:10.7,0,70.1:10.7:6:13.21:33
11	113744620	.	N	N[11:113744908[	.	LOWSUPPORT	END=113744908;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DEL;SVLEN=288;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1059133:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_11_113729001_113754001_100C;svaba_MATENM=0;svaba_SPAN=288;svaba_HOMSEQ=TCACGCCTGTAATCCCAGCACT;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.871:0:0:0,7.8,85.8:7.8:0:0:28	18.56:0:4:0,18.3,320.1:18.3:4:5.836:113
11	122959858	.	N	N[11:122960205[	.	LOWSUPPORT	END=122960205;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DEL;SVLEN=347;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1064701:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_11_122941001_122966001_85C;svaba_MATENM=0;svaba_SPAN=347;svaba_SUBN=1;svaba_HOMSEQ=GGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	13.21:0:0:0,12.9,141.9:12.9:0:0:47	17.3:0:6:0,17.1,366.3:17.1:6:9.413:132
12	529737	.	N	N[12:531360[	.	LOWSUPPORT	END=531360;Callers=brass;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=1623;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=1577_1;brass_BKDIST=1622;brass_FFV=460;brass_OCC=1;brass_SID=CCDC77;brass_GENE=CCDC77;brass_TID=ENST00000239830;brass_AS=1;brass_EPH=2;brass_RGN=intron;brass_RGNNO=5;brass_RGNC=13;brass_TSRDS=A00227:74:HCWC7DSXX:1:1171:6858:25520,A00227:74:HCWC7DSXX:1:1668:30680:12633,A00227:74:HCWC7DSXX:1:2326:10221:11271,A00333:42:HCKYCDSXX:3:2213:22146:6872,A00333:42:HCKYCDSXX:4:2528:29966:17973;brass_PH=2	brass_PS:brass_RC	0:0	5:0
12	2017782	.	N	]12:2018144]N	.	LOWSUPPORT	END=2018144;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DUP;SVLEN=362;STRANDS=-+;svaba_DISC_MAPQ=23;svaba_NUMPARTS=0;svaba_MATEID=1072942:1;svaba_MAPQ=23;svaba_NM=-1;svaba_SCTG=12:2017782(-)-12:2018144(+)__12_2009001_2034001D;svaba_MATENM=-1;svaba_SPAN=362;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.93:0:0:0,12.6,138.6:12.6:0:0:46	19.28:14:0:0,19,623.8:19:14:23.69:233
12	6157619	.	N	N[12:6157891[	.	LOWSUPPORT	END=6157891;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=272;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1075286:1;svaba_MAPQ=60;svaba_NM=2;svaba_SCTG=c_12_6149501_6174501_83C;svaba_MATENM=0;svaba_SPAN=272;svaba_HOMSEQ=AGTGCTGGGATTACAGGCGTGAGCCA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	9.838:0:0:0,9.6,105.6:9.6:0:0:35	45.83:0:4:0,45.7,620.5:45.7:4:4.764:210
12	6322926	.	N	]12:17941252]N	.	PASS	END=17941252;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=DUP;SVLEN=11618326;STRANDS=-+;gridss_REF=161;gridss_ASQ=1147.83;gridss_ASRP=78;gridss_ASSR=67;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=192.91;gridss_BSC=4;gridss_BSCQ=68.67;gridss_BUM=4;gridss_BUMQ=124.24;gridss_BVF=4;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1181.74;gridss_REFPAIR=65;gridss_RP=39;gridss_RPQ=632.89;gridss_SR=28;gridss_SRQ=446.27;gridss_VF=64;gridss_AS=2;gridss_BA=0;gridss_BEID=asm195-284776,asm197-22766,asm197-22990;gridss_BEIDH=546,456,2;gridss_BEIDL=0,0,0;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=0,1;gridss_CQ=3392.51;gridss_EVENT=gridss195_32372;gridss_HOMLEN=1;gridss_HOMSEQ=C;gridss_IHOMPOS=0,1;gridss_PARID=gridss195_32372o;gridss_RAS=1;gridss_SB=0.40404;gridss_SC=545M2X;svaba_NUMPARTS=2;svaba_MATEID=1084092:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_17934001_17959001_93C;svaba_MATENM=0;svaba_SPAN=11618326;svaba_HOMSEQ=C;svaba_EVDNC=ASSMB;brass_SVCLASS=tandem-duplication;brass_MATEID=1587_1;brass_BKDIST=11618325;brass_OCC=1;brass_SID=CD9;brass_GENE=CD9;brass_TID=ENST00000382518;brass_AS=1;brass_RGN=intron;brass_RGNNO=2;brass_RGNC=9;brass_TSRDS=A00227:74:HCWC7DSXX:1:1170:21242:20588,A00227:74:HCWC7DSXX:1:1341:32407:5415,A00227:74:HCWC7DSXX:1:1366:25437:25128,A00227:74:HCWC7DSXX:1:1377:6379:16924,A00227:74:HCWC7DSXX:1:1433:8703:5134,A00227:74:HCWC7DSXX:1:1446:25789:19413,A00227:74:HCWC7DSXX:1:1502:32325:25191,A00227:74:HCWC7DSXX:1:1538:8703:34475,A00227:74:HCWC7DSXX:1:1567:20121:14105,A00227:74:HCWC7DSXX:1:1663:32190:19507,A00227:74:HCWC7DSXX:1:2101:4987:34240,A00227:74:HCWC7DSXX:1:2203:30355:33144,A00227:74:HCWC7DSXX:1:2305:28962:21684,A00227:74:HCWC7DSXX:1:2344:14452:11835,A00227:74:HCWC7DSXX:1:2417:27986:7842,A00227:74:HCWC7DSXX:1:2477:8260:29199,A00227:74:HCWC7DSXX:1:2550:12807:4225,A00333:42:HCKYCDSXX:3:1143:32642:8359,A00333:42:HCKYCDSXX:3:1311:15194:10394,A00333:42:HCKYCDSXX:3:1518:14579:7764,A00333:42:HCKYCDSXX:3:2203:9851:4366,A00333:42:HCKYCDSXX:3:2443:12301:18004,A00333:42:HCKYCDSXX:3:2571:13232:2769,A00333:42:HCKYCDSXX:3:2573:9616:30984,A00333:42:HCKYCDSXX:3:2578:22155:31250,A00333:42:HCKYCDSXX:4:1246:28854:11287,A00333:42:HCKYCDSXX:4:1357:12310:8343,A00333:42:HCKYCDSXX:4:1359:19633:16955,A00333:42:HCKYCDSXX:4:1403:11894:11412,A00333:42:HCKYCDSXX:4:1441:25726:2988,A00333:42:HCKYCDSXX:4:1469:16025:27618,A00333:42:HCKYCDSXX:4:1621:24243:8500,A00333:42:HCKYCDSXX:4:1648:11632:31594,A00333:42:HCKYCDSXX:4:1674:5764:25379,A00333:42:HCKYCDSXX:4:2351:23574:8750,A00333:42:HCKYCDSXX:4:2368:30029:4085,A00333:42:HCKYCDSXX:4:2460:28528:33677,A00333:42:HCKYCDSXX:4:2462:23891:2127,A00333:42:HCKYCDSXX:4:2505:7111:28119,A00333:42:HCKYCDSXX:4:2636:21450:22451	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	44:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:26:0:0:0:0:0:5.341:0:0:0,5.1,56.1:5.1:0:0:19:0:0	117:1147.83:78:67:0:0:0:0:0:0:0:165.42:4:68.67:3:96.75:3:0:0:0:3408.73:1181.74:39:39:632.89:28:446.27:64:-112:0:39:110.9,0,48.2:48.2:39:112:64:40:0
12	6333582	.	N	N[12:17943375[	.	PASS	END=17943375;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=DEL;SVLEN=11609793;STRANDS=+-;gridss_REF=168;gridss_ASQ=1179.32;gridss_ASRP=80;gridss_ASSR=73;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=243.92;gridss_BSC=12;gridss_BSCQ=179.42;gridss_BUM=2;gridss_BUMQ=64.5;gridss_BVF=3;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1294.5;gridss_REFPAIR=66;gridss_RP=40;gridss_RPQ=649.12;gridss_SR=26;gridss_SRQ=423.89;gridss_VF=64;gridss_AS=1;gridss_BA=0;gridss_BEID=asm195-140349,asm197-170226;gridss_BEIDH=0,0;gridss_BEIDL=433,566;gridss_CAS=0;gridss_CQ=3561.67;gridss_EVENT=gridss195_25880;gridss_IHOMPOS=0,0;gridss_PARID=gridss195_25880o;gridss_RAS=1;gridss_SB=0.322034;gridss_SC=1X400M;svaba_NUMPARTS=2;svaba_MATEID=1084093:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_17934001_17959001_0C;svaba_MATENM=1;svaba_SPAN=11609793;svaba_INSERTION=CCAGAGGCAGGGCCTC;svaba_EVDNC=ASSMB;brass_BAS=84;brass_SVCLASS=deletion;brass_MATEID=1588_1;brass_BKDIST=11609792;brass_SID=CD9;brass_GENE=CD9;brass_TID=ENST00000382518;brass_AS=1;brass_RGN=intron;brass_RGNNO=2;brass_RGNC=9;brass_TSRDS=A00227:74:HCWC7DSXX:1:1112:31665:18568,A00227:74:HCWC7DSXX:1:1143:9598:15765,A00227:74:HCWC7DSXX:1:1272:2067:12587,A00227:74:HCWC7DSXX:1:1349:21359:33254,A00227:74:HCWC7DSXX:1:1436:18014:31250,A00227:74:HCWC7DSXX:1:1444:9923:4711,A00227:74:HCWC7DSXX:1:1517:28022:12633,A00227:74:HCWC7DSXX:1:1570:20401:31031,A00227:74:HCWC7DSXX:1:1631:13919:19523,A00227:74:HCWC7DSXX:1:1667:9100:21042,A00227:74:HCWC7DSXX:1:2134:28131:30420,A00227:74:HCWC7DSXX:1:2223:15917:24017,A00227:74:HCWC7DSXX:1:2240:21694:15483,A00227:74:HCWC7DSXX:1:2338:8684:17534,A00227:74:HCWC7DSXX:1:2515:8811:11678,A00227:74:HCWC7DSXX:1:2531:29686:14231,A00227:74:HCWC7DSXX:1:2539:30879:22310,A00227:74:HCWC7DSXX:1:2612:14714:20744,A00227:74:HCWC7DSXX:1:2651:30011:8625,A00227:74:HCWC7DSXX:1:2665:31096:25692,A00333:42:HCKYCDSXX:3:1114:17824:25066,A00333:42:HCKYCDSXX:3:1153:2989:3881,A00333:42:HCKYCDSXX:3:1156:26115:36135,A00333:42:HCKYCDSXX:3:1247:11261:33364,A00333:42:HCKYCDSXX:3:1373:16034:28823,A00333:42:HCKYCDSXX:3:1551:4246:2832,A00333:42:HCKYCDSXX:3:2218:24948:27508,A00333:42:HCKYCDSXX:3:2525:20039:9173,A00333:42:HCKYCDSXX:3:2619:13087:8500,A00333:42:HCKYCDSXX:3:2661:1434:20635,A00333:42:HCKYCDSXX:4:1253:5249:20447,A00333:42:HCKYCDSXX:4:1264:14796:24768,A00333:42:HCKYCDSXX:4:1358:14226:17018,A00333:42:HCKYCDSXX:4:1449:21504:11271,A00333:42:HCKYCDSXX:4:2149:15040:9032,A00333:42:HCKYCDSXX:4:2526:21766:13855,A00333:42:HCKYCDSXX:4:2533:6623:4100,A00333:42:HCKYCDSXX:4:2577:15203:25473,A00333:42:HCKYCDSXX:4:2654:14425:14826,A00333:42:HCKYCDSXX:4:2671:10285:15295;brass_TRDS=A00227:74:HCWC7DSXX:1:1272:2067:12587/1,A00333:42:HCKYCDSXX:4:1215:30110:21731/2,A00333:42:HCKYCDSXX:3:2661:1434:20635/2,A00227:74:HCWC7DSXX:1:1529:30409:22811/1,A00333:42:HCKYCDSXX:4:2671:10285:15295/1,A00333:42:HCKYCDSXX:4:1465:17002:13338/1,A00227:74:HCWC7DSXX:1:2134:28131:30420/1,A00227:74:HCWC7DSXX:1:2338:8684:17534/1,A00227:74:HCWC7DSXX:1:2339:6705:14011/1,A00333:42:HCKYCDSXX:4:1324:15176:5822/2,A00227:74:HCWC7DSXX:1:1631:13919:19523/2,A00227:74:HCWC7DSXX:1:2134:28275:30452/1,A00333:42:HCKYCDSXX:3:1118:24252:25833/1,A00227:74:HCWC7DSXX:1:1535:4915:10848/2,A00333:42:HCKYCDSXX:4:2149:15040:9032/2,A00227:74:HCWC7DSXX:1:2539:30879:22310/2,A00333:42:HCKYCDSXX:3:1247:11261:33364/2,A00333:42:HCKYCDSXX:3:1153:2989:3881/2,A00333:42:HCKYCDSXX:4:2406:7554:1861/1,A00333:42:HCKYCDSXX:3:1176:15971:10739/1,A00333:42:HCKYCDSXX:3:2619:13087:8500/2	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	42:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:17:0:0:0:0:0:5.341:0:0:0,5.1,56.1:5.1:0:0:19:0:0	126:1179.32:80:73:0:0:0:0:0:0:0:243.92:12:179.42:2:64.5:3:0:0:0:3546.83:1294.5:49:40:649.12:26:423.89:64:-120.9:0:43:120.5,0,71:71:43:120.9:77:40:21
12	7826503	.	N	N[12:7826784[	.	LOWSUPPORT	END=7826784;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=281;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1077024:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_7815501_7840501_15C;svaba_MATENM=0;svaba_SPAN=281;svaba_HOMSEQ=GGCGTGATCTCGGCTC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.37:0:0:0,12.3,135.3:12.3:0:0:44	33.46:0:4:0,33.4,485.2:33.4:4:5.168:166
12	22255658	.	N	N[12:22255894[	.	LOWSUPPORT	END=22255894;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=236;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1087039:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_22246001_22271001_134C;svaba_MATENM=1;svaba_SPAN=236;svaba_HOMSEQ=GGTGGCCTGCCCCTCCCTCTGGGAGCT;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.65:0:0:0,12.6,138.6:12.6:0:0:45	56.79:0:4:0,56.5,739.3:56.5:4:4.473:249
12	34439180	.	N	N[12:34439568[	.	LOWSUPPORT	END=34439568;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=388;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1095216:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_12_34422501_34447501_36C;svaba_MATENM=0;svaba_SPAN=388;svaba_HOMSEQ=GGGAGGTAGAGACACCTGTGGAAGGAAAAAAAATGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.68:0:0:0,10.5,115.5:10.5:0:0:38	39.15:0:5:0,38.8,574.3:38.8:5:6.561:198
12	34466648	.	N	N[12:34466848[	.	LOWSUPPORT	END=34466848;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=200;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1095328:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_34447001_34472001_58C;svaba_MATENM=1;svaba_SPAN=200;svaba_HOMSEQ=CACCGTGGGTGTGAACCAGGGATGCCAGGAT;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	16.58:0:0:0,16.5,181.5:16.5:0:0:59	48.29:0:7:0,48.1,736:48.1:7:9.451:254
12	46665455	.	N	]12:46677091]N	.	PASS	END=46677091;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=DUP;SVLEN=11636;STRANDS=-+;gridss_REF=218;gridss_ASQ=1343.96;gridss_ASRP=81;gridss_ASSR=85;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=231.77;gridss_BSC=7;gridss_BSCQ=102.77;gridss_BUM=4;gridss_BUMQ=129;gridss_BVF=3;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1313.21;gridss_REFPAIR=90;gridss_RP=41;gridss_RPQ=665.35;gridss_SR=38;gridss_SRQ=605.38;gridss_VF=64;gridss_AS=1;gridss_BA=0;gridss_BEID=asm200-172684,asm200-4781;gridss_BEIDH=451,596;gridss_BEIDL=0,0;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=0,1;gridss_CQ=3911.67;gridss_EVENT=gridss200_27277;gridss_HOMLEN=1;gridss_HOMSEQ=T;gridss_IHOMPOS=0,1;gridss_PARID=gridss200_27277o;gridss_RAS=1;gridss_SB=0.507692;gridss_SC=59M1D595M2X;svaba_NUMPARTS=2;svaba_MATEID=1100510:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_12_46672501_46697501_84C;svaba_MATENM=0;svaba_SPAN=11636;svaba_HOMSEQ=T;svaba_EVDNC=ASSMB;brass_BAS=78;brass_SVCLASS=tandem-duplication;brass_MATEID=1614_1;brass_HOMSEQ=T;brass_IMPRECISE;brass_CIPOS=0,1;brass_CIEND=0,1;brass_HOMLEN=1;brass_BKDIST=11633;brass_TSRDS=A00227:74:HCWC7DSXX:1:1116:30391:27477,A00227:74:HCWC7DSXX:1:1140:21504:5134,A00227:74:HCWC7DSXX:1:1147:1696:25942,A00227:74:HCWC7DSXX:1:1231:17996:24424,A00227:74:HCWC7DSXX:1:1256:14543:6511,A00227:74:HCWC7DSXX:1:1317:13042:22075,A00227:74:HCWC7DSXX:1:1436:16215:28134,A00227:74:HCWC7DSXX:1:1447:18457:15577,A00227:74:HCWC7DSXX:1:1468:27742:33786,A00227:74:HCWC7DSXX:1:1476:24523:29340,A00227:74:HCWC7DSXX:1:1632:30689:30154,A00227:74:HCWC7DSXX:1:1637:28384:8938,A00227:74:HCWC7DSXX:1:1661:6198:13573,A00227:74:HCWC7DSXX:1:2123:17146:22858,A00227:74:HCWC7DSXX:1:2178:1904:3599,A00227:74:HCWC7DSXX:1:2342:23583:9486,A00227:74:HCWC7DSXX:1:2376:25328:21214,A00227:74:HCWC7DSXX:1:2451:20763:13056,A00227:74:HCWC7DSXX:1:2519:3025:2221,A00227:74:HCWC7DSXX:1:2523:22236:9314,A00227:74:HCWC7DSXX:1:2540:23746:7607,A00227:74:HCWC7DSXX:1:2557:32009:10614,A00227:74:HCWC7DSXX:1:2561:15420:36933,A00227:74:HCWC7DSXX:1:2612:28628:27398,A00333:42:HCKYCDSXX:3:1261:1949:25786,A00333:42:HCKYCDSXX:3:1350:10493:34194,A00333:42:HCKYCDSXX:3:1361:28818:15264,A00333:42:HCKYCDSXX:3:1449:7012:5588,A00333:42:HCKYCDSXX:3:1559:30599:29309,A00333:42:HCKYCDSXX:3:1607:19877:15405,A00333:42:HCKYCDSXX:3:1639:18792:15593,A00333:42:HCKYCDSXX:3:1653:11162:21261,A00333:42:HCKYCDSXX:3:2157:31376:26021,A00333:42:HCKYCDSXX:3:2311:20980:32409,A00333:42:HCKYCDSXX:3:2365:11207:9846,A00333:42:HCKYCDSXX:3:2368:25292:26600,A00333:42:HCKYCDSXX:3:2403:2772:7983,A00333:42:HCKYCDSXX:4:1167:27633:8484,A00333:42:HCKYCDSXX:4:2153:3694:30592,A00333:42:HCKYCDSXX:4:2376:1805:18396,A00333:42:HCKYCDSXX:4:2477:5556:32722;brass_TRDS=A00227:74:HCWC7DSXX:1:2342:23339:9283/2,A00227:74:HCWC7DSXX:1:1140:21504:5134/1,A00227:74:HCWC7DSXX:1:2342:23583:9486/2,A00333:42:HCKYCDSXX:3:1261:1949:25786/1,A00333:42:HCKYCDSXX:4:2153:3694:30592/2,A00227:74:HCWC7DSXX:1:2320:17806:34428/2,A00333:42:HCKYCDSXX:4:1167:27633:8484/2,A00227:74:HCWC7DSXX:1:1661:6198:13573/1,A00227:74:HCWC7DSXX:1:1317:13042:22075/1,A00333:42:HCKYCDSXX:4:2672:19470:23406/1,A00227:74:HCWC7DSXX:1:2330:26666:2926/2,A00333:42:HCKYCDSXX:3:1653:11162:21261/1,A00227:74:HCWC7DSXX:1:2524:5746:31610/1,A00333:42:HCKYCDSXX:3:1313:1579:5541/2,A00227:74:HCWC7DSXX:1:1231:17996:24424/2,A00333:42:HCKYCDSXX:4:2162:2085:6762/2,A00227:74:HCWC7DSXX:1:1463:2799:27195/1,A00227:74:HCWC7DSXX:1:1430:21992:5447/1,A00227:74:HCWC7DSXX:1:1468:27742:33786/2,A00227:74:HCWC7DSXX:1:2523:4670:17566/1,A00227:74:HCWC7DSXX:1:2233:11478:32800/2,A00227:74:HCWC7DSXX:1:1330:29957:5776/1,A00227:74:HCWC7DSXX:1:2519:3025:2221/2	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	39:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:27:0:0:0:0:0:5.341:0:0:0,5.1,56.1:5.1:0:0:19:0:0	179:1343.96:81:85:0:0:0:0:0:0:0:231.77:7:102.77:4:129:3:0:0:0:3927.9:1313.21:63:41:665.35:38:605.38:64:-110.5:0:42:110.6,0,140.3:99:42:110.7:100:41:23
12	47021088	.	N	]12:47040741]N	.	PASS	END=47040741;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=DUP;SVLEN=19653;STRANDS=-+;gridss_REF=196;gridss_ASQ=1715.41;gridss_ASRP=111;gridss_ASSR=109;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=151.19;gridss_BSC=8;gridss_BSCQ=118.94;gridss_BUM=1;gridss_BUMQ=32.25;gridss_BVF=1;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1829.83;gridss_REFPAIR=97;gridss_RP=56;gridss_RPQ=908.77;gridss_SR=44;gridss_SRQ=703.92;gridss_VF=86;gridss_AS=1;gridss_BA=0;gridss_BEID=asm200-177848,asm200-9861;gridss_BEIDH=459,332;gridss_BEIDL=0,0;gridss_CAS=0;gridss_CQ=5157.93;gridss_EVENT=gridss200_27511;gridss_IHOMPOS=0,0;gridss_PARID=gridss200_27511o;gridss_RAS=1;gridss_SB=0.509317;gridss_SC=127M6D331M1X;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=1100616:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_47040001_47065001_84C;svaba_MATENM=0;svaba_SPAN=19653;svaba_EVDNC=ASDIS;brass_SVCLASS=tandem-duplication;brass_MATEID=1615_1;brass_BKDIST=19652;brass_FFV=100;brass_OCC=1;brass_SID=RP11-446N19.1;brass_GENE=RP11-446N19.1;brass_TID=ENST00000607353;brass_AS=1;brass_RGN=UTRintron;brass_RGNNO=2;brass_RGNC=3;brass_TSRDS=A00227:74:HCWC7DSXX:1:1108:29026:19225,A00227:74:HCWC7DSXX:1:1176:2817:8469,A00227:74:HCWC7DSXX:1:1207:26901:5118,A00227:74:HCWC7DSXX:1:1226:6406:3818,A00227:74:HCWC7DSXX:1:1254:31051:2065,A00227:74:HCWC7DSXX:1:1277:30789:36871,A00227:74:HCWC7DSXX:1:1302:18756:24392,A00227:74:HCWC7DSXX:1:1341:25247:1626,A00227:74:HCWC7DSXX:1:1352:32705:11350,A00227:74:HCWC7DSXX:1:1368:20862:25347,A00227:74:HCWC7DSXX:1:1402:10782:28119,A00227:74:HCWC7DSXX:1:1416:6117:25300,A00227:74:HCWC7DSXX:1:1508:17861:23531,A00227:74:HCWC7DSXX:1:1515:31367:33927,A00227:74:HCWC7DSXX:1:1568:24858:5932,A00227:74:HCWC7DSXX:1:1572:30996:7388,A00227:74:HCWC7DSXX:1:1630:29559:20870,A00227:74:HCWC7DSXX:1:1675:8721:32189,A00227:74:HCWC7DSXX:1:2130:26304:5556,A00227:74:HCWC7DSXX:1:2214:7346:8202,A00227:74:HCWC7DSXX:1:2430:27950:27038,A00227:74:HCWC7DSXX:1:2504:2880:3975,A00227:74:HCWC7DSXX:1:2673:18756:33129,A00227:74:HCWC7DSXX:1:2675:19497:2628,A00333:42:HCKYCDSXX:3:1101:16776:8312,A00333:42:HCKYCDSXX:3:1146:8422:32675,A00333:42:HCKYCDSXX:3:1501:30671:5885,A00333:42:HCKYCDSXX:3:1561:21459:8688,A00333:42:HCKYCDSXX:3:2115:20157:36245,A00333:42:HCKYCDSXX:3:2213:18295:4178,A00333:42:HCKYCDSXX:3:2217:16821:6386,A00333:42:HCKYCDSXX:3:2303:24297:23249,A00333:42:HCKYCDSXX:3:2336:1307:19539,A00333:42:HCKYCDSXX:3:2350:23285:31172,A00333:42:HCKYCDSXX:3:2369:26883:22936,A00333:42:HCKYCDSXX:3:2535:14073:16031,A00333:42:HCKYCDSXX:3:2610:4237:3818,A00333:42:HCKYCDSXX:4:1221:26585:32910,A00333:42:HCKYCDSXX:4:1412:11903:11240,A00333:42:HCKYCDSXX:4:1438:11605:4085,A00333:42:HCKYCDSXX:4:1533:7256:30780,A00333:42:HCKYCDSXX:4:1544:1805:10817,A00333:42:HCKYCDSXX:4:1613:12201:3803,A00333:42:HCKYCDSXX:4:1667:27489:32753,A00333:42:HCKYCDSXX:4:2207:2519:36699,A00333:42:HCKYCDSXX:4:2225:16758:26725,A00333:42:HCKYCDSXX:4:2263:16938:2707,A00333:42:HCKYCDSXX:4:2317:8910:3928,A00333:42:HCKYCDSXX:4:2461:14235:34851,A00333:42:HCKYCDSXX:4:2520:18186:19116,A00333:42:HCKYCDSXX:4:2525:30355:1485,A00333:42:HCKYCDSXX:4:2526:17083:32268	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	34:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:30:0:0:0:0:0:4.779:0:0:0,4.5,49.5:4.5:0:0:17:0:0	162:1715.41:111:109:0:0:0:0:0:0:0:151.19:8:118.94:1:32.25:1:0:0:0:5157.93:1829.83:67:56:908.77:44:703.92:86:-177.9:4:59:175.1,0,59.6:59.6:61:177.9:94:52:0
12	49529401	.	N	N[12:49529754[	.	LOWSUPPORT	END=49529754;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=353;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1102287:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_49514501_49539501_119C;svaba_MATENM=1;svaba_SPAN=353;svaba_HOMSEQ=CTCAGCCTCCCAAGTAGCTGGGA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.12:0:0:0,9.9,108.9:9.9:0:0:36	33.74:0:4:0,33.4,485.2:33.4:4:5.158:167
12	50593966	.	N	N[12:50594238[	.	LOWSUPPORT	END=50594238;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=272;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1102720:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_50592501_50617501_13C;svaba_MATENM=0;svaba_SPAN=272;svaba_HOMSEQ=CCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.52:0:0:0,11.4,125.4:11.4:0:0:41	33.81:0:5:0,33.7,518.2:33.7:5:6.78:179
12	50996593	.	N	N[12:50996884[	.	LOWSUPPORT	END=50996884;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=291;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1103055:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_50984501_51009501_37C;svaba_MATENM=0;svaba_SPAN=291;svaba_HOMSEQ=TTGCAGTGAGCCGAG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.12:0:0:0,9.9,108.9:9.9:0:0:36	27.27:0:4:0,27.1,415.9:27.1:4:5.414:144
12	54827762	.	N	N[12:54828076[	.	LOWSUPPORT	END=54828076;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=314;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1105725:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_54806501_54831501_116C;svaba_MATENM=0;svaba_SPAN=314;svaba_HOMSEQ=ATCTCGGCTCACTGCAA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	9.838:0:0:0,9.6,105.6:9.6:0:0:35	32.9:0:4:0,32.8,478.6:32.8:4:5.189:164
12	69879241	.	N	N[12:69879506[	.	LOWSUPPORT	END=69879506;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=265;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1114682:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_69874001_69899001_45C;svaba_MATENM=0;svaba_SPAN=265;svaba_HOMSEQ=CCAAAGTGCTGGGATTACAGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	9.276:0:0:0,9,99:9:0:0:33	52.64:0:5:0,52.3,722.8:52.3:5:6.094:246
12	74753356	.	N	N]12:74754432]	.	PASS	END=74754432;Callers=svaba,brass;NumCallers=2;CHR2=12;SVTYPE=INV;SVLEN=1076;STRANDS=++;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=1117890:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=12:74753392(+)-12:74754473(+)__12_74749501_74774501D;svaba_MATENM=-1;svaba_SPAN=1081;svaba_IMPRECISE;svaba_EVDNC=DSCRD;brass_SVCLASS=inversion;brass_MATEID=1632_1;brass_BKDIST=1069;brass_FFV=100;brass_OCC=1;brass_SID=RP11-81H3.2;brass_GENE=RP11-81H3.2;brass_TID=ENST00000551726;brass_AS=-1;brass_RGN=UTRintron;brass_RGNNO=2;brass_RGNC=6;brass_TSRDS=A00227:74:HCWC7DSXX:1:1262:31512:15671,A00227:74:HCWC7DSXX:1:1332:2040:16266,A00227:74:HCWC7DSXX:1:1440:7744:36354,A00227:74:HCWC7DSXX:1:1674:19018:7717,A00333:42:HCKYCDSXX:3:1246:20980:15969,A00333:42:HCKYCDSXX:3:1333:31991:1376,A00333:42:HCKYCDSXX:3:1527:12717:36667,A00333:42:HCKYCDSXX:3:2229:11505:9518,A00333:42:HCKYCDSXX:3:2406:31810:7733,A00333:42:HCKYCDSXX:4:1515:10511:3662,A00333:42:HCKYCDSXX:4:1543:31810:9580,A00333:42:HCKYCDSXX:4:2162:11279:34961	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	11.24:0:0:0,11.1,122.1:11.1:0:0:40:0:0	3.114:12:0:0,2.8,386.1:2.8:12:21.78:152:12:0
12	93899104	.	N	]12:93932084]N	.	PASS	END=93932084;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=DUP;SVLEN=32980;STRANDS=-+;gridss_REF=167;gridss_ASQ=1213.62;gridss_ASRP=72;gridss_ASSR=75;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=195.53;gridss_BSC=7;gridss_BSCQ=103.53;gridss_BUM=3;gridss_BUMQ=91.99;gridss_BVF=3;gridss_CASQ=32.02;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1114.83;gridss_REFPAIR=77;gridss_RP=38;gridss_RPQ=616.67;gridss_SR=32;gridss_SRQ=509.65;gridss_VF=57;gridss_AS=1;gridss_BA=0;gridss_BEID=asm204-195984,asm204-82136,asm204-82245;gridss_BEIDH=463,463,229;gridss_BEIDL=0,0,2;gridss_CAS=1;gridss_CQ=3470.56;gridss_EVENT=gridss204_23492;gridss_IHOMPOS=0,0;gridss_PARID=gridss204_23492o;gridss_RAS=1;gridss_SB=0.508772;gridss_SC=462M1X;svaba_NUMPARTS=2;svaba_MATEID=1126504:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_93884001_93909001_64C;svaba_MATENM=0;svaba_SPAN=32980;svaba_EVDNC=ASSMB;brass_SVCLASS=tandem-duplication;brass_MATEID=1636_1;brass_BKDIST=32979;brass_OCC=1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1160:3866:21652,A00227:74:HCWC7DSXX:1:1169:27579:13651,A00227:74:HCWC7DSXX:1:1229:30382:6261,A00227:74:HCWC7DSXX:1:1313:29668:29731,A00227:74:HCWC7DSXX:1:1319:19470:1924,A00227:74:HCWC7DSXX:1:1441:3992:35117,A00227:74:HCWC7DSXX:1:1452:19614:27759,A00227:74:HCWC7DSXX:1:1508:24352:12164,A00227:74:HCWC7DSXX:1:1517:19208:37043,A00227:74:HCWC7DSXX:1:1602:9679:35446,A00227:74:HCWC7DSXX:1:1664:7690:4445,A00227:74:HCWC7DSXX:1:2102:15854:13197,A00227:74:HCWC7DSXX:1:2125:5222:36902,A00227:74:HCWC7DSXX:1:2220:16071:24126,A00227:74:HCWC7DSXX:1:2222:32570:32972,A00227:74:HCWC7DSXX:1:2241:1976:7482,A00333:42:HCKYCDSXX:3:1308:3929:1282,A00333:42:HCKYCDSXX:3:1358:11189:17206,A00333:42:HCKYCDSXX:3:1474:16450:22122,A00333:42:HCKYCDSXX:3:1665:15953:5415,A00333:42:HCKYCDSXX:3:1669:18683:2347,A00333:42:HCKYCDSXX:3:2173:24966:34961,A00333:42:HCKYCDSXX:3:2223:19714:25708,A00333:42:HCKYCDSXX:3:2236:20157:22373,A00333:42:HCKYCDSXX:3:2274:14009:7435,A00333:42:HCKYCDSXX:4:1325:2175:22639,A00333:42:HCKYCDSXX:4:1526:12861:8108,A00333:42:HCKYCDSXX:4:2137:10954:30358,A00333:42:HCKYCDSXX:4:2140:9498:4382,A00333:42:HCKYCDSXX:4:2178:17101:24158,A00333:42:HCKYCDSXX:4:2246:1660:16548,A00333:42:HCKYCDSXX:4:2262:25590:14998,A00333:42:HCKYCDSXX:4:2265:20039:18035,A00333:42:HCKYCDSXX:4:2341:19000:30921,A00333:42:HCKYCDSXX:4:2345:19515:25207,A00333:42:HCKYCDSXX:4:2348:5376:8453,A00333:42:HCKYCDSXX:4:2440:20555:8124,A00333:42:HCKYCDSXX:4:2449:27317:18709	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	47:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:25:0:0:0:0:0:7.027:0:0:0,6.9,75.9:6.9:0:0:25:0:0	120:1213.62:72:75:0:0:0:0:0:0:0:168.03:7:103.53:2:64.5:2:32.02:0:0:3486.79:1114.83:52:38:616.67:32:509.65:57:-90.14:0:33:90.2,0,77:77:33:90.14:67:38:0
12	93931351	.	N	N[12:93931549[	.	LOWSUPPORT	END=93931549;Callers=gridss;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=198;STRANDS=+-;gridss_REF=188;gridss_ASQ=838.34;gridss_ASRP=6;gridss_ASSR=81;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=591.03;gridss_BSC=35;gridss_BSCQ=558.78;gridss_BUM=1;gridss_BUMQ=32.25;gridss_BVF=2;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=549.2;gridss_REFPAIR=101;gridss_RP=5;gridss_RPQ=80.33;gridss_SR=18;gridss_SRQ=291.9;gridss_VF=66;gridss_AS=2;gridss_BA=0;gridss_BEID=asm204-196485,asm204-196706,asm204-82137,asm204-82245;gridss_BEIDH=0,0,0,0;gridss_BEIDL=113,269,146,2;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=0,1;gridss_CQ=1759.76;gridss_EVENT=gridss204_15969;gridss_HOMLEN=1;gridss_HOMSEQ=C;gridss_IHOMPOS=0,1;gridss_PARID=gridss204_15969o;gridss_RAS=2;gridss_SB=0.447761;gridss_SC=2X534M	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF	42:0:0:0:0:0:0:0:0:0:0:12.27:1:12.27:0:0:1:0:0:0:0:0:23:0:0:0:0:0	146:838.34:6:81:0:0:0:0:0:0:0:578.76:34:546.51:1:32.25:1:0:0:0:1759.76:549.2:78:5:80.33:18:291.9:66
12	97058594	.	N	[19:42129215[N	.	LOWSUPPORT	END=42129215;Callers=svaba;NumCallers=1;CHR2=19;SVTYPE=TRA;STRANDS=--;svaba_DISC_MAPQ=6;svaba_NUMPARTS=3;svaba_MATEID=1494219:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_19_42115501_42140501_36C;svaba_REPSEQ=ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG;svaba_MATENM=0;svaba_SPAN=-1;svaba_HOMSEQ=ATATACATATATATA;svaba_EVDNC=TSI_L	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	6.184:0:0:0,5.6,27.6:5.6:0:0:22	10.48:10:1:0,8.8,86.9:8.8:11:2.099:92
12	112165007	.	N	N[12:112165278[	.	LOWSUPPORT	END=112165278;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=271;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1136580:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_112161001_112186001_77C;svaba_MATENM=0;svaba_SPAN=271;svaba_HOMSEQ=AGATCGCGCCACTGCACTCCAGCCTGGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.93:0:0:0,12.6,138.6:12.6:0:0:46	18.91:0:5:0,18.6,353.1:18.6:5:7.546:126
12	117936733	.	N	]12:117949993]N	.	PASS	END=117949993;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=DUP;SVLEN=13260;STRANDS=-+;gridss_REF=201;gridss_ASQ=1532.45;gridss_ASRP=92;gridss_ASSR=92;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=209.18;gridss_BSC=14;gridss_BSCQ=209.18;gridss_BUM=0;gridss_BUMQ=0;gridss_BVF=0;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1410.48;gridss_REFPAIR=64;gridss_RP=46;gridss_RPQ=746.49;gridss_SR=36;gridss_SRQ=576.78;gridss_VF=73;gridss_AS=1;gridss_BA=0;gridss_BEID=asm207-167854,asm207-22324;gridss_BEIDH=570,613;gridss_BEIDL=0,0;gridss_CAS=0;gridss_CIPOS=-3,0;gridss_CIRPOS=-3,0;gridss_CQ=4266.19;gridss_EVENT=gridss207_22688;gridss_HOMLEN=3;gridss_HOMSEQ=TGC;gridss_IHOMPOS=-3,0;gridss_PARID=gridss207_22688o;gridss_RAS=1;gridss_SB=0.584507;gridss_SC=609M1X2N1X;svaba_NUMPARTS=2;svaba_MATEID=1139757:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_117943001_117968001_64C;svaba_MATENM=1;svaba_SPAN=13260;svaba_HOMSEQ=TGC;svaba_EVDNC=ASSMB;brass_BAS=85;brass_SVCLASS=tandem-duplication;brass_MATEID=1645_1;brass_HOMSEQ=TGC;brass_IMPRECISE;brass_CIPOS=0,3;brass_CIEND=0,3;brass_HOMLEN=3;brass_BKDIST=13253;brass_FFV=460;brass_SID=KSR2;brass_GENE=KSR2;brass_TID=ENST00000425217;brass_AS=-1;brass_EPH=2;brass_RGN=intron;brass_RGNNO=14;brass_RGNC=20;brass_TSRDS=A00227:74:HCWC7DSXX:1:1115:20247:28072,A00227:74:HCWC7DSXX:1:1178:19081:12211,A00227:74:HCWC7DSXX:1:1259:7491:19539,A00227:74:HCWC7DSXX:1:1335:16785:24580,A00227:74:HCWC7DSXX:1:1340:25346:35837,A00227:74:HCWC7DSXX:1:1343:28438:34773,A00227:74:HCWC7DSXX:1:1441:1452:24925,A00227:74:HCWC7DSXX:1:1454:4942:3693,A00227:74:HCWC7DSXX:1:1473:5132:18082,A00227:74:HCWC7DSXX:1:1553:17463:10535,A00227:74:HCWC7DSXX:1:1556:28230:5165,A00227:74:HCWC7DSXX:1:1565:22227:36135,A00227:74:HCWC7DSXX:1:1633:27516:3020,A00227:74:HCWC7DSXX:1:1645:22444:31000,A00227:74:HCWC7DSXX:1:2131:16441:27899,A00227:74:HCWC7DSXX:1:2162:30300:17926,A00227:74:HCWC7DSXX:1:2176:23249:27038,A00227:74:HCWC7DSXX:1:2213:10655:27680,A00227:74:HCWC7DSXX:1:2262:9200:3145,A00227:74:HCWC7DSXX:1:2353:26087:28040,A00227:74:HCWC7DSXX:1:2369:16884:2519,A00227:74:HCWC7DSXX:1:2375:17119:10942,A00227:74:HCWC7DSXX:1:2407:29469:25942,A00227:74:HCWC7DSXX:1:2428:20274:27179,A00227:74:HCWC7DSXX:1:2439:17309:18944,A00227:74:HCWC7DSXX:1:2458:12075:1673,A00227:74:HCWC7DSXX:1:2459:31864:28150,A00227:74:HCWC7DSXX:1:2503:10393:24878,A00227:74:HCWC7DSXX:1:2508:14705:20635,A00227:74:HCWC7DSXX:1:2574:30282:18270,A00227:74:HCWC7DSXX:1:2609:6406:7451,A00333:42:HCKYCDSXX:3:1126:25337:3756,A00333:42:HCKYCDSXX:3:1367:7609:25285,A00333:42:HCKYCDSXX:3:1375:11966:28855,A00333:42:HCKYCDSXX:3:1560:23918:26068,A00333:42:HCKYCDSXX:3:2106:17842:11475,A00333:42:HCKYCDSXX:3:2162:26865:12414,A00333:42:HCKYCDSXX:3:2445:5773:17002,A00333:42:HCKYCDSXX:3:2561:17553:8750,A00333:42:HCKYCDSXX:4:1114:3450:30796,A00333:42:HCKYCDSXX:4:1365:3287:18176,A00333:42:HCKYCDSXX:4:1569:1036:22795,A00333:42:HCKYCDSXX:4:2274:4363:3662,A00333:42:HCKYCDSXX:4:2447:5448:31814,A00333:42:HCKYCDSXX:4:2552:13747:26710,A00333:42:HCKYCDSXX:4:2674:3866:23844;brass_TRDS=A00227:74:HCWC7DSXX:1:2503:10393:24878/1,A00227:74:HCWC7DSXX:1:2539:19434:20901/1,A00227:74:HCWC7DSXX:1:2353:26087:28040/2,A00227:74:HCWC7DSXX:1:2573:12418:6965/1,A00333:42:HCKYCDSXX:4:2166:10465:3991/2,A00227:74:HCWC7DSXX:1:1645:21513:34648/2,A00227:74:HCWC7DSXX:1:2375:17119:10942/2,A00227:74:HCWC7DSXX:1:1343:1416:21324/2,A00227:74:HCWC7DSXX:1:2574:30282:18270/2,A00227:74:HCWC7DSXX:1:1633:27516:3020/2,A00227:74:HCWC7DSXX:1:2265:19705:19742/2,A00227:74:HCWC7DSXX:1:2311:17535:8688/1,A00227:74:HCWC7DSXX:1:1178:19081:12211/1,A00227:74:HCWC7DSXX:1:1321:29921:25817/1,A00333:42:HCKYCDSXX:3:2367:5511:19554/2,A00227:74:HCWC7DSXX:1:1163:31259:26287/2,A00227:74:HCWC7DSXX:1:2131:16441:27899/1,A00227:74:HCWC7DSXX:1:1645:22444:31000/2,A00333:42:HCKYCDSXX:4:1326:20292:19132/2,A00227:74:HCWC7DSXX:1:2439:17309:18944/1,A00227:74:HCWC7DSXX:1:2176:23249:27038/1,A00227:74:HCWC7DSXX:1:1452:25039:11945/2,A00227:74:HCWC7DSXX:1:1462:7817:23046/2,A00333:42:HCKYCDSXX:4:1569:1036:22795/2,A00227:74:HCWC7DSXX:1:1462:5475:35900/2,A00227:74:HCWC7DSXX:1:2110:6334:36573/1,A00227:74:HCWC7DSXX:1:2509:28384:11318/1,A00333:42:HCKYCDSXX:3:1126:25337:3756/2,A00333:42:HCKYCDSXX:3:2162:26865:12414/1,A00227:74:HCWC7DSXX:1:1454:4942:3693/1,A00333:42:HCKYCDSXX:3:1367:7609:25285/2,A00227:74:HCWC7DSXX:1:2656:1298:9314/2,A00227:74:HCWC7DSXX:1:1556:28230:5165/2,A00333:42:HCKYCDSXX:4:1351:28818:19366/2,A00333:42:HCKYCDSXX:4:1457:6822:29089/2,A00333:42:HCKYCDSXX:3:1375:11966:28855/2,A00227:74:HCWC7DSXX:1:1340:25346:35837/2,A00227:74:HCWC7DSXX:1:1133:18231:7921/2,A00227:74:HCWC7DSXX:1:2262:9200:3145/1,A00227:74:HCWC7DSXX:1:1553:17463:10535/1;brass_PH=2	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	53:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:25:0:0:0:0:0:7.308:0:0:0,7.2,79.2:7.2:0:0:26:0:0	148:1532.45:92:92:0:0:0:0:0:0:0:209.18:14:209.18:0:0:0:0:0:0:4266.19:1410.48:39:46:746.49:36:576.78:73:-156.7:0:54:154.4,0,58.7:58.7:54:156.7:85:46:40
12	122305107	.	N	]12:122327478]N	.	PASS	END=122327478;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=DUP;SVLEN=22371;STRANDS=-+;gridss_REF=131;gridss_ASQ=1151.64;gridss_ASRP=66;gridss_ASSR=74;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=284.06;gridss_BSC=10;gridss_BSCQ=164.57;gridss_BUM=4;gridss_BUMQ=119.49;gridss_BVF=3;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1119.13;gridss_REFPAIR=73;gridss_RP=33;gridss_RPQ=535.53;gridss_SR=27;gridss_SRQ=435.52;gridss_VF=57;gridss_AS=1;gridss_BA=0;gridss_BEID=asm207-232644,asm207-85606;gridss_BEIDH=518,375;gridss_BEIDL=0,0;gridss_CAS=0;gridss_CQ=3241.81;gridss_EVENT=gridss207_24990;gridss_IHOMPOS=0,0;gridss_PARID=gridss207_24990o;gridss_RAS=1;gridss_SB=0.684685;gridss_SC=516M1X;svaba_NUMPARTS=2;svaba_MATEID=1144509:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_122304001_122329001_180C;svaba_MATENM=0;svaba_SPAN=22371;svaba_INSERTION=T;svaba_EVDNC=ASSMB;brass_BAS=94;brass_SVCLASS=tandem-duplication;brass_MATEID=1649_1;brass_BKDIST=22370;brass_TSRDS=A00227:74:HCWC7DSXX:1:1120:26838:35164,A00227:74:HCWC7DSXX:1:1137:32054:33708,A00227:74:HCWC7DSXX:1:1338:2058:36495,A00227:74:HCWC7DSXX:1:1352:16785:27305,A00227:74:HCWC7DSXX:1:1375:20410:25003,A00227:74:HCWC7DSXX:1:1418:26006:12837,A00227:74:HCWC7DSXX:1:1426:12707:17394,A00227:74:HCWC7DSXX:1:1570:14796:16219,A00227:74:HCWC7DSXX:1:1613:4752:33614,A00227:74:HCWC7DSXX:1:1640:27407:31548,A00227:74:HCWC7DSXX:1:2125:2410:3286,A00227:74:HCWC7DSXX:1:2176:10257:1157,A00227:74:HCWC7DSXX:1:2214:19443:17848,A00227:74:HCWC7DSXX:1:2238:28022:3082,A00227:74:HCWC7DSXX:1:2334:25690:22185,A00227:74:HCWC7DSXX:1:2423:1488:33285,A00227:74:HCWC7DSXX:1:2439:1570:11443,A00227:74:HCWC7DSXX:1:2565:29234:33677,A00227:74:HCWC7DSXX:1:2630:1045:22091,A00333:42:HCKYCDSXX:3:1307:3784:12023,A00333:42:HCKYCDSXX:3:1311:16911:7921,A00333:42:HCKYCDSXX:3:1322:31042:22686,A00333:42:HCKYCDSXX:3:1501:27606:18521,A00333:42:HCKYCDSXX:3:1560:14000:12399,A00333:42:HCKYCDSXX:3:2315:28727:20932,A00333:42:HCKYCDSXX:3:2565:18412:26365,A00333:42:HCKYCDSXX:4:1110:21468:23328,A00333:42:HCKYCDSXX:4:1115:3269:27195,A00333:42:HCKYCDSXX:4:1226:12924:7623,A00333:42:HCKYCDSXX:4:1271:30355:8782,A00333:42:HCKYCDSXX:4:1277:1886:26240,A00333:42:HCKYCDSXX:4:1637:2058:33614,A00333:42:HCKYCDSXX:4:2164:24668:9267,A00333:42:HCKYCDSXX:4:2335:11822:27132,A00333:42:HCKYCDSXX:4:2639:21992:1626;brass_TRDS=A00227:74:HCWC7DSXX:1:2239:23628:20744/1,A00227:74:HCWC7DSXX:1:1674:31087:10394/2,A00227:74:HCWC7DSXX:1:2630:1045:22091/1,A00227:74:HCWC7DSXX:1:2238:28022:3082/1,A00227:74:HCWC7DSXX:1:1636:9697:23234/1,A00227:74:HCWC7DSXX:1:1375:20410:25003/1,A00227:74:HCWC7DSXX:1:2215:10447:12978/2,A00227:74:HCWC7DSXX:1:2176:10257:1157/2,A00333:42:HCKYCDSXX:3:2436:16450:8594/2,A00333:42:HCKYCDSXX:3:2454:25753:29872/1,A00333:42:HCKYCDSXX:4:2568:3540:18615/1,A00333:42:HCKYCDSXX:3:2668:15501:9330/2,A00227:74:HCWC7DSXX:1:1570:14796:16219/1,A00333:42:HCKYCDSXX:3:2315:28727:20932/2,A00333:42:HCKYCDSXX:4:1110:21468:23328/2,A00227:74:HCWC7DSXX:1:2552:10836:7075/1,A00227:74:HCWC7DSXX:1:1359:21965:32737/1,A00227:74:HCWC7DSXX:1:1120:26838:35164/2,A00333:42:HCKYCDSXX:3:2557:26106:4867/2,A00227:74:HCWC7DSXX:1:1342:12771:12023/1,A00333:42:HCKYCDSXX:4:2164:24668:9267/1,A00227:74:HCWC7DSXX:1:2565:29234:33677/2,A00227:74:HCWC7DSXX:1:1338:2058:36495/2,A00227:74:HCWC7DSXX:1:1535:4264:7936/1,A00333:42:HCKYCDSXX:4:2568:3341:19554/1,A00333:42:HCKYCDSXX:3:2565:18412:26365/1,A00333:42:HCKYCDSXX:4:1271:30355:8782/1,A00227:74:HCWC7DSXX:1:1176:15212:22545/2,A00227:74:HCWC7DSXX:1:2215:10366:12680/2,A00333:42:HCKYCDSXX:3:2372:26350:17534/1,A00227:74:HCWC7DSXX:1:1254:19298:1031/2,A00227:74:HCWC7DSXX:1:1431:32913:9580/1,A00333:42:HCKYCDSXX:3:1307:3784:12023/2;brass_SID=PSMD9;brass_GENE=PSMD9;brass_TID=ENST00000541212;brass_AS=1;brass_RGN=intron;brass_RGNNO=1;brass_RGNC=6	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	32:0:0:0:0:0:0:0:0:0:0:54.99:0:0:2:54.99:2:0:0:0:0:0:28:0:0:0:0:0:8.433:0:0:0,8.4,92.4:8.4:0:0:30:0:0	99:1151.64:66:74:0:0:0:0:0:0:0:229.07:10:164.57:2:64.5:1:0:0:0:3241.81:1119.13:45:33:535.53:27:435.52:57:-99.15:0:40:99.2,0,194.9:99:40:100.9:117:35:33
12	128466882	.	N	N]X:69030208]	.	LOWSUPPORT	END=69030208;Callers=svaba;NumCallers=1;CHR2=X;SVTYPE=TRA;STRANDS=++;svaba_DISC_MAPQ=15;svaba_NUMPARTS=0;svaba_MATEID=1148049:1;svaba_MAPQ=15;svaba_NM=-1;svaba_SCTG=12:128466882(+)-23:69030208(+)__12_128453501_128478501D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	4.498:0:0:0,4.2,46.2:4.2:0:0:16	-31.39:13:0:31.4,0,71:31.4:13:32.26:41
13	19492446	.	N	[21:14874648[N	.	LOWSUPPORT	END=14874648;Callers=svaba;NumCallers=1;CHR2=21;SVTYPE=TRA;STRANDS=--;svaba_DISC_MAPQ=18;svaba_NUMPARTS=0;svaba_MATEID=1548188:1;svaba_MAPQ=18;svaba_NM=-1;svaba_SCTG=13:19492446(-)-21:14874648(-)__21_14871501_14896501D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	5.06:0:0:0,4.8,52.8:4.8:0:0:18	-15.94:9:0:16.1,0,105.2:16.1:9:19.86:49
13	19517722	.	N	N[13:19518122[	.	LOWSUPPORT	END=19518122;Callers=svaba;NumCallers=1;CHR2=13;SVTYPE=DEL;SVLEN=400;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1152737:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_13_19502001_19527001_42C;svaba_MATENM=0;svaba_SPAN=400;svaba_HOMSEQ=CCCGGGGGACTTCTTGCCGCTTTGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	18.83:0:0:0,18.6,204.6:18.6:0:0:67	29.88:0:5:0,29.8,475.3:29.8:5:6.957:165
13	25195781	.	N	N[13:25196140[	.	LOWSUPPORT	END=25196140;Callers=svaba;NumCallers=1;CHR2=13;SVTYPE=DEL;SVLEN=359;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1157152:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_13_25186001_25211001_30C;svaba_MATENM=0;svaba_SPAN=359;svaba_HOMSEQ=ATTCTCCTGCCTCAGCCTCCCGAGT;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.96:0:0:0,10.8,118.8:10.8:0:0:39	19.96:0:4:0,19.8,336.6:19.8:4:5.761:118
13	77418001	.	N	N[13:77418524[	.	PASS	END=77418524;Callers=svaba,gridss;NumCallers=2;CHR2=13;SVTYPE=DEL;SVLEN=523;STRANDS=+-;gridss_REF=121;gridss_ASQ=1202.34;gridss_ASRP=60;gridss_ASSR=90;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=171.89;gridss_BSC=10;gridss_BSCQ=144.39;gridss_BUM=1;gridss_BUMQ=27.49;gridss_BVF=1;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1177.95;gridss_REFPAIR=60;gridss_RP=29;gridss_RPQ=468.52;gridss_SR=37;gridss_SRQ=589.68;gridss_VF=70;gridss_AS=1;gridss_BA=0;gridss_BEID=asm216-170903,asm216-58605;gridss_BEIDH=0,0;gridss_BEIDL=447,495;gridss_CAS=0;gridss_CQ=3438.5;gridss_EVENT=gridss216_12096;gridss_IHOMPOS=0,0;gridss_PARID=gridss216_12096o;gridss_RAS=1;gridss_SB=0.540146;gridss_SC=1X494M;svaba_NUMPARTS=2;svaba_MATEID=1186420:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_13_77395501_77420501_87C;svaba_MATENM=0;svaba_SPAN=523;svaba_EVDNC=ASSMB	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	50:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:21:0:0:0:0:0:12.93:0:0:0,12.6,138.6:12.6:0:0:46	71:1202.34:60:90:0:0:0:0:0:0:0:144.39:10:144.39:0:0:0:0:0:0:3438.5:1177.95:39:29:468.52:37:589.68:70:-142.4:0:51:142.1,0,92.6:92.6:51:142.4:94
13	113369670	.	N	]13:113369910]N	.	LOWSUPPORT	END=113369910;Callers=svaba;NumCallers=1;CHR2=13;SVTYPE=DUP;SVLEN=240;STRANDS=-+;svaba_DISC_MAPQ=26;svaba_NUMPARTS=0;svaba_MATEID=1205699:1;svaba_MAPQ=26;svaba_NM=-1;svaba_SCTG=13:113369670(-)-13:113369910(+)__13_113361501_113386501D;svaba_MATENM=-1;svaba_SPAN=240;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	8.714:0:0:0,8.4,92.4:8.4:0:0:31	6.199:8:0:0,6,303.6:6:8:14.03:116
13	113666122	.	N	N[13:113667190[	.	LOWSUPPORT	END=113667190;Callers=brass;NumCallers=1;CHR2=13;SVTYPE=DEL;SVLEN=1068;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=1689_1;brass_BKDIST=1067;brass_FFV=460;brass_OCC=1;brass_SID=MCF2L;brass_GENE=MCF2L;brass_TID=ENST00000375604;brass_AS=1;brass_EPH=1;brass_RGN=intron;brass_RGNNO=1;brass_RGNC=30;brass_TSRDS=A00227:74:HCWC7DSXX:1:1422:2492:6120,A00227:74:HCWC7DSXX:1:2226:12707:33520,A00333:42:HCKYCDSXX:3:1373:13792:8437,A00333:42:HCKYCDSXX:3:1540:17237:21042,A00333:42:HCKYCDSXX:3:1639:28673:36370,A00333:42:HCKYCDSXX:4:2645:1868:23860;brass_PH=1	brass_PS:brass_RC	0:0	6:0
13	114185750	.	N	N[13:114186009[	.	LOWSUPPORT	END=114186009;Callers=svaba;NumCallers=1;CHR2=13;SVTYPE=DEL;SVLEN=259;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1206338:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_13_114170001_114195001_103C;svaba_MATENM=0;svaba_SPAN=259;svaba_HOMSEQ=TGCAGATCAAGAGCAGCAC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	19.96:0:0:0,19.8,217.8:19.8:0:0:71	16.67:0:9:0,16.6,448.9:16.6:9:14.85:165
14	24471168	.	N	N[14:24473353[	.	LOWSUPPORT	END=24473353;Callers=brass;NumCallers=1;CHR2=14;SVTYPE=DEL;SVLEN=2185;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=1696_1;brass_REPS=L1PA2;brass_BKDIST=2184;brass_FFV=460;brass_OCC=1;brass_SID=DHRS4L2;brass_GENE=DHRS4L2;brass_TID=ENST00000534993;brass_AS=1;brass_RGN=intron;brass_RGNNO=3;brass_RGNC=5;brass_TSRDS=A00227:74:HCWC7DSXX:1:1462:21866:7482,A00227:74:HCWC7DSXX:1:1538:30987:4241,A00227:74:HCWC7DSXX:1:1612:10384:3537,A00227:74:HCWC7DSXX:1:2402:20627:15327,A00227:74:HCWC7DSXX:1:2424:10628:17456,A00227:74:HCWC7DSXX:1:2446:11514:25160,A00333:42:HCKYCDSXX:4:1210:4942:7733,A00333:42:HCKYCDSXX:4:1554:18982:1172	brass_PS:brass_RC	0:0	8:0
14	106217138	.	N	N]14:106315394]	.	LOWSUPPORT	END=106315394;Callers=svaba;NumCallers=1;CHR2=14;SVTYPE=INV;SVLEN=98256;STRANDS=++;svaba_DISC_MAPQ=52;svaba_NUMPARTS=0;svaba_MATEID=1258377:1;svaba_MAPQ=52;svaba_NM=-1;svaba_SCTG=14:106217138(+)-14:106315394(+)__14_106207501_106232501D;svaba_MATENM=-1;svaba_SPAN=98256;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	5.622:0:0:0,5.4,59.4:5.4:0:0:20	-16.35:11:0:16.4,0,161.6:16.4:11:23.38:71
15	24575542	.	N	N[15:24783091[	.	LOWSUPPORT	END=24783091;Callers=svaba;NumCallers=1;CHR2=15;SVTYPE=DEL;SVLEN=207549;STRANDS=+-;svaba_DISC_MAPQ=43;svaba_NUMPARTS=0;svaba_MATEID=1266060:1;svaba_MAPQ=43;svaba_NM=-1;svaba_SCTG=15:24575542(+)-15:24783091(-)__15_24769501_24794501D;svaba_MATENM=-1;svaba_SPAN=207549;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	4.779:0:0:0,4.5,49.5:4.5:0:0:17	-34.34:15:0:34.4,0,100.4:34.4:15:36.19:54
15	38883407	.	N	N[15:42788162[	.	PASS	END=42788162;Callers=svaba,gridss,brass;NumCallers=3;CHR2=15;SVTYPE=DEL;SVLEN=3904755;STRANDS=+-;gridss_REF=94;gridss_ASQ=1333.12;gridss_ASRP=92;gridss_ASSR=73;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=56.24;gridss_BSC=2;gridss_BSCQ=28.75;gridss_BUM=1;gridss_BUMQ=27.49;gridss_BVF=1;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1318.98;gridss_REFPAIR=61;gridss_RP=47;gridss_RPQ=762.72;gridss_SR=35;gridss_SRQ=557.88;gridss_VF=68;gridss_AS=1;gridss_BA=0;gridss_BEID=asm234-115341,asm235-167277;gridss_BEIDH=0,0;gridss_BEIDL=569,622;gridss_CAS=0;gridss_CIPOS=-2,0;gridss_CIRPOS=-2,0;gridss_CQ=3972.7;gridss_EVENT=gridss234_17862;gridss_HOMLEN=2;gridss_HOMSEQ=AG;gridss_IHOMPOS=-2,0;gridss_PARID=gridss234_17862o;gridss_RAS=1;gridss_SB=0.454545;gridss_SC=1X1N1X570M;svaba_NUMPARTS=2;svaba_MATEID=1278014:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_15_42777001_42802001_71C;svaba_MATENM=1;svaba_SPAN=3904755;svaba_HOMSEQ=AG;svaba_EVDNC=ASSMB;brass_BAS=85;brass_SVCLASS=deletion;brass_MATEID=1766_1;brass_HOMSEQ=AG;brass_IMPRECISE;brass_CIPOS=0,2;brass_CIEND=0,2;brass_HOMLEN=2;brass_BKDIST=3904754;brass_TSRDS=A00227:74:HCWC7DSXX:1:1155:17228:5838,A00227:74:HCWC7DSXX:1:1163:18557:14152,A00227:74:HCWC7DSXX:1:1221:15365:29637,A00227:74:HCWC7DSXX:1:1231:9968:24612,A00227:74:HCWC7DSXX:1:1247:18204:12352,A00227:74:HCWC7DSXX:1:1270:10954:28667,A00227:74:HCWC7DSXX:1:1324:31910:27477,A00227:74:HCWC7DSXX:1:1325:25916:8296,A00227:74:HCWC7DSXX:1:1338:9173:17159,A00227:74:HCWC7DSXX:1:1347:22914:18161,A00227:74:HCWC7DSXX:1:1435:25825:20917,A00227:74:HCWC7DSXX:1:1460:17201:24424,A00227:74:HCWC7DSXX:1:1462:14597:27398,A00227:74:HCWC7DSXX:1:1635:10366:8202,A00227:74:HCWC7DSXX:1:1640:3341:11725,A00227:74:HCWC7DSXX:1:1649:16830:12352,A00227:74:HCWC7DSXX:1:2114:32226:11710,A00227:74:HCWC7DSXX:1:2132:27362:31594,A00227:74:HCWC7DSXX:1:2138:27823:34021,A00227:74:HCWC7DSXX:1:2220:16134:28995,A00227:74:HCWC7DSXX:1:2308:4679:12978,A00227:74:HCWC7DSXX:1:2353:25997:22028,A00227:74:HCWC7DSXX:1:2404:27706:26804,A00227:74:HCWC7DSXX:1:2428:21025:18364,A00227:74:HCWC7DSXX:1:2472:20916:27633,A00333:42:HCKYCDSXX:3:1254:9254:15734,A00333:42:HCKYCDSXX:3:1435:31855:19429,A00333:42:HCKYCDSXX:3:2143:20636:17096,A00333:42:HCKYCDSXX:3:2164:28447:17910,A00333:42:HCKYCDSXX:3:2232:1398:12587,A00333:42:HCKYCDSXX:3:2537:17960:33630,A00333:42:HCKYCDSXX:3:2563:26521:2988,A00333:42:HCKYCDSXX:4:1319:27028:23124,A00333:42:HCKYCDSXX:4:1332:9435:18364,A00333:42:HCKYCDSXX:4:1342:13196:21371,A00333:42:HCKYCDSXX:4:1441:19235:19742,A00333:42:HCKYCDSXX:4:1569:29008:12680,A00333:42:HCKYCDSXX:4:1604:24062:29982,A00333:42:HCKYCDSXX:4:1629:5529:34554,A00333:42:HCKYCDSXX:4:1670:24704:18443,A00333:42:HCKYCDSXX:4:1671:12301:33285,A00333:42:HCKYCDSXX:4:1673:26115:28369,A00333:42:HCKYCDSXX:4:2301:7934:4836,A00333:42:HCKYCDSXX:4:2348:31783:32988,A00333:42:HCKYCDSXX:4:2436:1533:12446,A00333:42:HCKYCDSXX:4:2653:19994:4554,A00333:42:HCKYCDSXX:4:2677:6117:7012;brass_TRDS=A00333:42:HCKYCDSXX:3:2537:17960:33630/1,A00227:74:HCWC7DSXX:1:1461:5421:22498/2,A00227:74:HCWC7DSXX:1:1270:10954:28667/1,A00227:74:HCWC7DSXX:1:2348:15483:14090/1,A00333:42:HCKYCDSXX:3:2624:2446:26866/1,A00227:74:HCWC7DSXX:1:1649:16830:12352/1,A00227:74:HCWC7DSXX:1:2669:32877:20791/1,A00227:74:HCWC7DSXX:1:1522:5430:9580/2,A00333:42:HCKYCDSXX:3:2659:12400:1579/2,A00227:74:HCWC7DSXX:1:1122:19696:30812/2,A00227:74:HCWC7DSXX:1:2672:8883:26835/2,A00333:42:HCKYCDSXX:4:2113:9462:10802/2,A00227:74:HCWC7DSXX:1:2138:27823:34021/1,A00227:74:HCWC7DSXX:1:1661:6524:35243/2,A00227:74:HCWC7DSXX:1:1243:12906:1172/1,A00227:74:HCWC7DSXX:1:1338:9173:17159/1;brass_SID=SNAP23;brass_GENE=SNAP23;brass_TID=ENST00000249647;brass_AS=1;brass_RGN=5UTRintron;brass_RGNNO=1;brass_RGNC=8	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	34:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:33:0:0:0:0:0:4.216:0:0:0,4.2,46.2:4.2:0:0:15:0:0	60:1333.12:92:73:0:0:0:0:0:0:0:28.75:2:28.75:0:0:0:0:0:0:3972.7:1318.98:28:47:762.72:35:557.88:68:-110.7:0:35:105.6,1.5,0:1.5:35:110.7:41:47:16
15	41860561	.	N	N[15:41862796[	.	LOWSUPPORT	END=41862796;Callers=brass;NumCallers=1;CHR2=15;SVTYPE=DEL;SVLEN=2235;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=1770_1;brass_BKDIST=2234;brass_FFV=680;brass_OCC=1;brass_SID=TYRO3;brass_GENE=TYRO3;brass_TID=ENST00000263798;brass_AS=1;brass_RGN=intron;brass_RGNNO=11;brass_RGNC=19;brass_TSRDS=A00227:74:HCWC7DSXX:1:2459:11288:3630,A00227:74:HCWC7DSXX:1:2619:32271:34522,A00333:42:HCKYCDSXX:3:2611:15203:19366,A00333:42:HCKYCDSXX:4:1642:28528:36652;brass_PH=1	brass_PS:brass_RC	0:0	4:0
15	52291182	.	N	N[15:52291478[	.	LOWSUPPORT	END=52291478;Callers=svaba;NumCallers=1;CHR2=15;SVTYPE=DEL;SVLEN=296;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1282673:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_15_52283001_52308001_34C;svaba_MATENM=1;svaba_SPAN=296;svaba_HOMSEQ=GAGCCACCGCGCCC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	9.838:0:0:0,9.6,105.6:9.6:0:0:35	13.57:0:5:0,13.2,293.7:13.2:5:7.905:107
15	52326285	.	N	N[15:52326587[	.	LOWSUPPORT	END=52326587;Callers=svaba;NumCallers=1;CHR2=15;SVTYPE=DEL;SVLEN=302;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1282809:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_15_52307501_52332501_4C;svaba_MATENM=0;svaba_SPAN=302;svaba_HOMSEQ=GCAACCTCTGCCTCCCGGGTTCAAGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.37:0:0:0,12.3,135.3:12.3:0:0:44	18.28:0:4:0,18,316.8:18:4:5.852:112
15	64917628	.	N	N[15:64917969[	.	LOWSUPPORT	END=64917969;Callers=svaba;NumCallers=1;CHR2=15;SVTYPE=DEL;SVLEN=341;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1289785:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_15_64900501_64925501_27C;svaba_MATENM=0;svaba_SPAN=341;svaba_HOMSEQ=TCCCAGCTACTTGGGAGGCTGAGGCAGGA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.68:0:0:0,10.5,115.5:10.5:0:0:38	19.19:0:5:0,18.9,356.4:18.9:5:7.528:127
15	93785861	.	N	]15:93786279]N	.	LOWSUPPORT	END=93786279;Callers=svaba;NumCallers=1;CHR2=15;SVTYPE=DUP;SVLEN=418;STRANDS=-+;svaba_DISC_MAPQ=37;svaba_NUMPARTS=0;svaba_MATEID=1306595:1;svaba_MAPQ=37;svaba_NM=-1;svaba_SCTG=15:93785861(-)-15:93786279(+)__15_93786001_93811001D;svaba_MATENM=-1;svaba_SPAN=418;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	4.498:0:0:0,4.2,46.2:4.2:0:0:16	-20.43:9:0:20.6,0,60.2:20.6:9:21.63:33
15	101314488	.	N	N[20:3422110[	.	LOWSUPPORT	END=3422110;Callers=svaba;NumCallers=1;CHR2=20;SVTYPE=TRA;STRANDS=+-;svaba_DISC_MAPQ=15;svaba_NUMPARTS=0;svaba_MATEID=1511760:1;svaba_MAPQ=15;svaba_NM=-1;svaba_SCTG=15:101314488(+)-20:3422110(-)__20_3405501_3430501D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.871:0:0:0,7.8,85.8:7.8:0:0:28	-7.856:8:0:8,0,156.5:8:8:16.09:66
16	1054898	.	N	N[16:1055158[	.	LOWSUPPORT	END=1055158;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=260;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1312976:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_16_1053501_1078501_24C;svaba_MATENM=0;svaba_SPAN=260;svaba_HOMSEQ=GAGGGAGAAGAGACGGGGGAGGGGGTAGAGATGGGGG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	4.779:0:0:0,4.5,49.5:4.5:0:0:17	-3.928:0:4:4.1,0,76.7:4.1:4:8.043:33
16	7659880	.	N	N[16:7660162[	.	LOWSUPPORT	END=7660162;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=282;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1318157:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_16_7644001_7669001_37C;svaba_MATENM=4;svaba_SPAN=282;svaba_HOMSEQ=CCCAGGCTGGAGTGCAGTGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.52:0:0:0,11.4,125.4:11.4:0:0:41	15.19:0:4:0,15,283.8:15:4:6.033:101
16	13220874	.	N	]16:13221000]N	.	LOWSUPPORT	END=13221000;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DUP;SVLEN=126;STRANDS=-+;svaba_NUMPARTS=2;svaba_MATEID=1322448:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_16_13205501_13230501_13C;svaba_MATENM=0;svaba_SPAN=126;svaba_HOMSEQ=GAGA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	8.433:0:0:0,8.4,92.4:8.4:0:0:30	-31.38:0:17:31.4,0,189.8:31.4:17:37.93:88
16	15626364	.	N	N[16:15626649[	.	LOWSUPPORT	END=15626649;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=285;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1324436:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_16_15606501_15631501_24C;svaba_MATENM=1;svaba_SPAN=285;svaba_SUBN=1;svaba_HOMSEQ=GCCTCGGCCTCCCAAAGTGTTGGGATTACAGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	9.276:0:0:0,9,99:9:0:0:33	21.16:0:5:0,21,379.5:21:5:7.411:134
16	26977591	.	N	N[16:26977959[	.	LOWSUPPORT	END=26977959;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=368;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1334117:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_16_26974501_26999501_31C;svaba_MATENM=0;svaba_SPAN=368;svaba_HOMSEQ=TTGCAGTGAGCCAAGATCGCGCCACT;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.37:0:0:0,12.3,135.3:12.3:0:0:44	9.781:0:7:0,9.6,313.5:9.6:7:11.83:117
16	58694527	.	N	N[16:58694816[	.	LOWSUPPORT	END=58694816;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=289;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1347824:1;svaba_MAPQ=60;svaba_NM=2;svaba_SCTG=c_16_58677501_58702501_1C;svaba_MATENM=0;svaba_SPAN=289;svaba_HOMSEQ=CAAAGTGCTGGGATTAAAGGTGTGAGCCACTGCGCCC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.52:0:0:0,11.4,125.4:11.4:0:0:41	21.93:0:4:0,21.6,356.4:21.6:4:5.66:125
16	74138534	.	N	N[16:74138853[	.	LOWSUPPORT	END=74138853;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=319;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1356343:1;svaba_MAPQ=60;svaba_NM=2;svaba_SCTG=c_16_74137001_74162001_12C;svaba_MATENM=0;svaba_SPAN=319;svaba_HOMSEQ=GCCCAGGCTGGAGTGCAGTGGCA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.24:0:0:0,11.1,122.1:11.1:0:0:40	22.21:0:4:0,21.9,359.7:21.9:4:5.646:126
16	89389831	.	N	N[16:89389988[	.	LOWSUPPORT	END=89389988;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=157;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1366990:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_16_89376001_89401001_69C;svaba_MATENM=0;svaba_SPAN=157;svaba_HOMSEQ=AGCCCAGGGCAGGGGGGCTGAGCC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.59:0:0:0,7.5,82.5:7.5:0:0:27	9.846:0:4:0,9.6,224.4:9.6:4:6.4:82
17	166950	.	N	]17:167298]N	.	LOWSUPPORT	END=167298;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DUP;SVLEN=348;STRANDS=-+;svaba_DISC_MAPQ=43;svaba_NUMPARTS=0;svaba_MATEID=1368982:1;svaba_MAPQ=43;svaba_NM=-1;svaba_SCTG=17:166950(-)-17:167298(+)__17_147001_172001D;svaba_MATENM=-1;svaba_SPAN=348;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.96:0:0:0,10.8,118.8:10.8:0:0:39	-0.1223:10:0:0.2,0,293.9:0.2:10:18.51:117
17	20370797	.	N	N[17:20602212[	.	LOWSUPPORT	END=20602212;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=231415;STRANDS=+-;svaba_DISC_MAPQ=33;svaba_NUMPARTS=0;svaba_MATEID=1384184:1;svaba_MAPQ=33;svaba_NM=-1;svaba_SCTG=17:20370797(+)-17:20602212(-)__17_20580001_20605001D;svaba_MATENM=-1;svaba_SPAN=231415;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.027:0:0:0,6.9,75.9:6.9:0:0:25	-21.34:12:0:21.5,0,140.3:21.5:12:26.51:65
17	29125376	.	N	N[17:29125814[	.	LOWSUPPORT	END=29125814;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=438;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1388082:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_17_29106001_29131001_80C;svaba_MATENM=0;svaba_SPAN=438;svaba_HOMSEQ=GCCACTGCACTCCAGCCTGGGCAA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.09:0:0:0,12,132:12:0:0:43	16.95:0:5:0,16.8,333.3:16.8:5:7.671:119
17	29166360	.	N	N[17:29166633[	.	LOWSUPPORT	END=29166633;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=273;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1387920:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_17_29155001_29180001_5C;svaba_MATENM=1;svaba_SPAN=273;svaba_HOMSEQ=TGTTGCCCAGGCTGGAGTGCA;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.37:0:0:0,12.3,135.3:12.3:0:0:44	16.03:0:4:0,15.9,293.7:15.9:4:5.982:104
17	42774327	.	N	N[17:42774716[	.	LOWSUPPORT	END=42774716;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=389;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1396656:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_17_42752501_42777501_71C;svaba_MATENM=0;svaba_SPAN=389;svaba_HOMSEQ=TGCTGGGATTACAGGCATAAG;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	7.027:0:0:0,6.9,75.9:6.9:0:0:25	12.66:0:4:0,12.3,254.1:12.3:4:6.197:92
17	47327796	.	N	N[17:47328168[	.	LOWSUPPORT	END=47328168;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=372;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1400262:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_17_47309501_47334501_90C;svaba_MATENM=0;svaba_SPAN=372;svaba_HOMSEQ=CTCACGCCTGTCATCCCAGCACTTTGGGAGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.96:0:0:0,10.8,118.8:10.8:0:0:39	15.47:0:4:0,15.3,287.1:15.3:4:6.016:102
17	74319984	.	N	N[17:74320402[	.	LOWSUPPORT	END=74320402;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=418;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1416830:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_17_74308501_74333501_90C;svaba_MATENM=0;svaba_SPAN=418;svaba_HOMSEQ=GGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTT;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.09:0:0:0,12,132:12:0:0:43	13.85:0:5:0,13.5,297:13.5:5:7.885:108
17	76536949	.	N	N[17:76536990[	.	LOWSUPPORT	END=76536990;Callers=gridss;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=41;STRANDS=+-;gridss_REF=61;gridss_ASQ=283.23;gridss_ASRP=0;gridss_ASSR=15;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=0;gridss_BSC=0;gridss_BSCQ=0;gridss_BUM=0;gridss_BUMQ=0;gridss_BVF=0;gridss_CASQ=0;gridss_IC=3;gridss_IQ=148.46;gridss_RASQ=148.46;gridss_REFPAIR=16;gridss_RP=0;gridss_RPQ=0;gridss_SR=2;gridss_SRQ=30.9;gridss_VF=12;gridss_AS=1;gridss_BA=0;gridss_BEID=asm258-10781,asm258-128081;gridss_BEIDH=0,0;gridss_BEIDL=0,0;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=0,1;gridss_CQ=611.04;gridss_EVENT=gridss258_2959;gridss_HOMLEN=1;gridss_HOMSEQ=T;gridss_IHOMPOS=-12,39;gridss_PARID=gridss258_2959o;gridss_RAS=1;gridss_SB=1;gridss_SC=2X145M	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF	11:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:8:0:0:0:0:0	50:283.23:0:15:0:0:0:0:0:0:0:0:0:0:0:0:0:0:3:148.46:611.04:148.46:8:0:0:2:30.9:12
18	74555488	.	N	N[18:74555781[	.	LOWSUPPORT	END=74555781;Callers=svaba;NumCallers=1;CHR2=18;SVTYPE=DEL;SVLEN=293;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1458747:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_18_74553501_74578501_98C;svaba_MATENM=0;svaba_SPAN=293;svaba_HOMSEQ=CAGTGGCTCACGCCTGTAATCCCAGCAC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	8.995:0:0:0,8.7,95.7:8.7:0:0:32	2.818:0:4:0,2.7,148.5:2.7:4:7.047:57
19	1705785	.	N	N[19:1706136[	.	LOWSUPPORT	END=1706136;Callers=svaba;NumCallers=1;CHR2=19;SVTYPE=DEL;SVLEN=351;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1463367:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_19_1690501_1715501_8C;svaba_MATENM=1;svaba_SPAN=351;svaba_HOMSEQ=GTGGGTGGATGGATGGATGGATGAATGGATGGAT;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.81:0:0:0,11.7,128.7:11.7:0:0:42	13.78:0:4:0,13.5,267.3:13.5:4:6.122:96
19	3237813	.	N	N[19:3238086[	.	LOWSUPPORT	END=3238086;Callers=svaba;NumCallers=1;CHR2=19;SVTYPE=DEL;SVLEN=273;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1464931:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_19_3234001_3259001_42C;svaba_MATENM=0;svaba_SPAN=273;svaba_HOMSEQ=TCACGCCTGTAATCCCAGCACTTTGGGAGGCC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.81:0:0:0,11.7,128.7:11.7:0:0:42	20.25:0:4:0,20.1,339.9:20.1:4:5.746:119
19	4355843	.	N	N[19:4356104[	.	LOWSUPPORT	END=4356104;Callers=svaba;NumCallers=1;CHR2=19;SVTYPE=DEL;SVLEN=261;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1466335:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_19_4336501_4361501_118C;svaba_MATENM=0;svaba_SPAN=261;svaba_HOMSEQ=CTCCCAAAGTGCTGGGATTACAGGTGTGAGCCAC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.24:0:0:0,11.1,122.1:11.1:0:0:40	14.91:0:4:0,14.7,280.5:14.7:4:6.05:100
19	18751883	.	N	N[19:18752168[	.	LOWSUPPORT	END=18752168;Callers=svaba;NumCallers=1;CHR2=19;SVTYPE=DEL;SVLEN=285;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1479043:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_19_18742501_18767501_97C;svaba_MATENM=0;svaba_SPAN=285;svaba_HOMSEQ=GCCCAGGCTGGAGTGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	10.12:0:0:0,9.9,108.9:9.9:0:0:36	16.38:0:5:0,16.2,326.7:16.2:5:7.708:117
19	47386359	.	N	]19:48560770]N	.	LOWSUPPORT	END=48560770;Callers=svaba;NumCallers=1;CHR2=19;SVTYPE=DUP;SVLEN=1174411;STRANDS=-+;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=1498023:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=19:47386359(-)-19:48560770(+)__19_47383001_47408001D;svaba_MATENM=-1;svaba_SPAN=1174411;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	4.779:0:0:0,4.5,49.5:4.5:0:0:17	-15.3:10:0:15.5,0,140.9:15.5:10:21.37:63
19	50369149	.	N	N[19:50369510[	.	LOWSUPPORT	END=50369510;Callers=svaba;NumCallers=1;CHR2=19;SVTYPE=DEL;SVLEN=361;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1501181:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_19_50347501_50372501_76C;svaba_MATENM=0;svaba_SPAN=361;svaba_HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.81:0:0:0,11.7,128.7:11.7:0:0:42	23.9:0:4:0,23.7,379.5:23.7:4:5.565:132
19	56075005	.	N	]19:56075769]N	.	LOWSUPPORT	END=56075769;Callers=svaba;NumCallers=1;CHR2=19;SVTYPE=DUP;SVLEN=764;STRANDS=-+;svaba_DISC_MAPQ=27;svaba_NUMPARTS=0;svaba_MATEID=1506925:1;svaba_MAPQ=27;svaba_NM=-1;svaba_SCTG=19:56075005(-)-19:56075769(+)__19_56056001_56081001D;svaba_MATENM=-1;svaba_SPAN=764;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	12.37:0:0:0,12.3,135.3:12.3:0:0:44	-1.528:10:0:1.7,0,278.9:1.7:10:18.71:112
20	6348938	.	N	[20:6349438[N	.	LOWSUPPORT	END=6349438;Callers=svaba;NumCallers=1;CHR2=20;SVTYPE=INV;SVLEN=500;STRANDS=--;svaba_DISC_MAPQ=23;svaba_NUMPARTS=0;svaba_MATEID=1513634:1;svaba_MAPQ=23;svaba_NM=-1;svaba_SCTG=20:6348938(-)-20:6349438(-)__20_6345501_6370501D;svaba_MATENM=-1;svaba_SPAN=500;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	18.27:0:0:0,18,198:18:0:0:65	18:8:0:0,17.8,432.4:17.8:8:12.93:158
20	37365694	.	N	N[20:37365738[	.	LOWSUPPORT	END=37365738;Callers=gridss;NumCallers=1;CHR2=20;SVTYPE=DEL;SVLEN=44;STRANDS=+-;gridss_REF=107;gridss_ASQ=549.46;gridss_ASRP=0;gridss_ASSR=22;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=89.37;gridss_BSC=2;gridss_BSCQ=29.62;gridss_BUM=2;gridss_BUMQ=59.74;gridss_BVF=3;gridss_CASQ=0;gridss_IC=10;gridss_IQ=519.2;gridss_RASQ=519.2;gridss_REFPAIR=78;gridss_RP=0;gridss_RPQ=0;gridss_SR=1;gridss_SRQ=15.95;gridss_VF=12;gridss_AS=1;gridss_BA=0;gridss_BEID=asm276-132299,asm276-9035;gridss_BEIDH=0,0;gridss_BEIDL=0,0;gridss_CAS=0;gridss_CIPOS=0,11;gridss_CIRPOS=0,11;gridss_CQ=1603.81;gridss_EVENT=gridss276_2359;gridss_HOMLEN=11;gridss_HOMSEQ=AAGAAAGAAAG;gridss_IHOMPOS=-40,43;gridss_PARID=gridss276_2359o;gridss_RAS=1;gridss_SB=0.571429;gridss_SC=1X10N1X121M	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF	28:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:19:0:0:0:0:0	79:549.46:0:22:0:0:0:0:0:0:0:61.87:2:29.62:1:32.25:2:0:10:519.2:1603.81:519.2:59:0:0:1:15.95:12
20	62476903	.	N	N[20:62477177[	.	LOWSUPPORT	END=62477177;Callers=svaba;NumCallers=1;CHR2=20;SVTYPE=DEL;SVLEN=274;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1543381:1;svaba_MAPQ=60;svaba_NM=2;svaba_SCTG=c_20_62475001_62500001_49C;svaba_MATENM=0;svaba_SPAN=274;svaba_HOMSEQ=AAAAAGTTTCACACACAAGCCAGGCGCGGTGGCTCAC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	13.21:0:0:0,12.9,141.9:12.9:0:0:47	17.58:0:6:0,17.4,369.6:17.4:6:9.393:133
21	27315752	.	N	N[21:27315998[	.	LOWSUPPORT	END=27315998;Callers=svaba;NumCallers=1;CHR2=21;SVTYPE=DEL;SVLEN=246;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1557752:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_21_27293001_27318001_51C;svaba_MATENM=1;svaba_SPAN=246;svaba_HOMSEQ=CTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGC;svaba_EVDNC=ASSMB	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	11.81:0:0:0,11.7,128.7:11.7:0:0:42	21.65:0:4:0,21.3,353.1:21.3:4:5.674:124
22	18318392	.	N	]22:18318686]N	.	PASS	END=18318686;Callers=svaba,gridss;NumCallers=2;CHR2=22;SVTYPE=DUP;SVLEN=294;STRANDS=-+;gridss_REF=117;gridss_ASQ=914.94;gridss_ASRP=26;gridss_ASSR=89;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=265.55;gridss_BSC=12;gridss_BSCQ=178.31;gridss_BUM=3;gridss_BUMQ=87.24;gridss_BVF=5;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=935.12;gridss_REFPAIR=66;gridss_RP=13;gridss_RPQ=210.64;gridss_SR=35;gridss_SRQ=556.79;gridss_VF=54;gridss_AS=1;gridss_BA=0;gridss_BEID=asm285-17196,asm285-91597;gridss_BEIDH=300,212;gridss_BEIDL=0,0;gridss_CAS=0;gridss_CQ=2493.44;gridss_EVENT=gridss285_8398;gridss_IHOMPOS=0,0;gridss_PARID=gridss285_8398o;gridss_RAS=1;gridss_SB=0.419118;gridss_SC=299M1X;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=1574553:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=22:18318391(-)-22:18318761(+)__22_18301501_18326501D;svaba_MATENM=-1;svaba_SPAN=370;svaba_IMPRECISE;svaba_EVDNC=DSCRD	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	51:0:0:0:0:0:0:0:0:0:0:54.99:0:0:2:54.99:2:0:0:0:0:0:20:0:0:0:0:0:11.81:0:0:0,11.7,128.7:11.7:0:0:42	66:914.94:26:89:0:0:0:0:0:0:0:210.56:12:178.31:1:32.25:3:0:0:0:2617.48:935.12:46:13:210.64:35:556.79:54:-41:20:0:41,0,182.9:41:20:46.11:89
22	29996794	.	N	N[22:36423021[	.	PASS	END=36423021;Callers=svaba,gridss,brass;NumCallers=3;CHR2=22;SVTYPE=DEL;SVLEN=6426227;STRANDS=+-;gridss_REF=60;gridss_ASQ=1117.48;gridss_ASRP=71;gridss_ASSR=59;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=324.8;gridss_BSC=7;gridss_BSCQ=103.81;gridss_BUM=7;gridss_BUMQ=220.99;gridss_BVF=3;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1004.87;gridss_REFPAIR=43;gridss_RP=35;gridss_RPQ=567.98;gridss_SR=23;gridss_SRQ=365.16;gridss_VF=55;gridss_AS=1;gridss_BA=0;gridss_BEID=asm286-46223,asm287-115826;gridss_BEIDH=0,0;gridss_BEIDL=375,375;gridss_CAS=0;gridss_CQ=3022.73;gridss_EVENT=gridss286_5195;gridss_IHOMPOS=0,0;gridss_PARID=gridss286_5195o;gridss_RAS=1;gridss_SB=0.516854;gridss_SC=1X387M96D151M;svaba_NUMPARTS=2;svaba_MATEID=1586494:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_22_36407001_36432001_6C;svaba_MATENM=0;svaba_SPAN=6426227;svaba_EVDNC=ASSMB;brass_SVCLASS=deletion;brass_MATEID=1938_1;brass_BKDIST=6426226;brass_OCC=1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1146:29577:23750,A00227:74:HCWC7DSXX:1:1160:25997:20525,A00227:74:HCWC7DSXX:1:1170:20166:3004,A00227:74:HCWC7DSXX:1:1263:7762:18850,A00227:74:HCWC7DSXX:1:1360:6225:20478,A00227:74:HCWC7DSXX:1:1404:27163:12336,A00227:74:HCWC7DSXX:1:1660:26250:27946,A00227:74:HCWC7DSXX:1:2126:25780:22842,A00227:74:HCWC7DSXX:1:2212:2582:24283,A00227:74:HCWC7DSXX:1:2270:21938:13213,A00227:74:HCWC7DSXX:1:2274:8359:36573,A00227:74:HCWC7DSXX:1:2324:17354:23719,A00227:74:HCWC7DSXX:1:2427:15221:17738,A00227:74:HCWC7DSXX:1:2528:11180:27993,A00227:74:HCWC7DSXX:1:2533:6171:7795,A00227:74:HCWC7DSXX:1:2571:23176:9909,A00227:74:HCWC7DSXX:1:2577:11948:13636,A00227:74:HCWC7DSXX:1:2615:11975:5666,A00227:74:HCWC7DSXX:1:2651:25654:15233,A00333:42:HCKYCDSXX:3:1218:11659:36746,A00333:42:HCKYCDSXX:3:1233:13322:33959,A00333:42:HCKYCDSXX:3:1471:14895:2988,A00333:42:HCKYCDSXX:3:2130:6858:14622,A00333:42:HCKYCDSXX:3:2173:28185:9972,A00333:42:HCKYCDSXX:3:2403:3197:26537,A00333:42:HCKYCDSXX:3:2527:6958:22341,A00333:42:HCKYCDSXX:3:2620:12780:16767,A00333:42:HCKYCDSXX:4:1407:9579:21277,A00333:42:HCKYCDSXX:4:1533:3278:22075,A00333:42:HCKYCDSXX:4:1646:23863:11036,A00333:42:HCKYCDSXX:4:2113:15302:17660,A00333:42:HCKYCDSXX:4:2250:11957:13902,A00333:42:HCKYCDSXX:4:2458:5249:32189,A00333:42:HCKYCDSXX:4:2543:29857:14465,A00333:42:HCKYCDSXX:4:2656:19985:16720,A00333:42:HCKYCDSXX:4:2657:27489:7451;brass_SID=RBFOX2;brass_GENE=RBFOX2;brass_TID=ENST00000438146;brass_AS=-1;brass_RGN=intron;brass_RGNNO=1;brass_RGNC=14	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	47:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:35:0:0:0:0:0:6.184:0:0:0,6,66:6:0:0:22:0:0	13:1117.48:71:59:0:0:0:0:0:0:0:297.31:7:103.81:6:193.5:2:0:0:0:3055.49:1004.87:8:35:567.98:23:365.16:55:-99.02:0:33:99,9,0:9:33:99.02:17:36:0
X	33446153	.	N	N[X:33631170[	.	PASS	END=33631170;Callers=svaba,gridss,brass;NumCallers=3;CHR2=X;SVTYPE=DEL;SVLEN=185017;STRANDS=+-;gridss_REF=31;gridss_ASQ=1370.01;gridss_ASRP=82;gridss_ASSR=91;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=116.91;gridss_BSC=8;gridss_BSCQ=116.91;gridss_BUM=0;gridss_BUMQ=0;gridss_BVF=0;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1388.24;gridss_REFPAIR=16;gridss_RP=44;gridss_RPQ=714.03;gridss_SR=38;gridss_SRQ=603.97;gridss_VF=71;gridss_AS=1;gridss_BA=0;gridss_BEID=asm291-64889,asm292-60491;gridss_BEIDH=0,0;gridss_BEIDL=376,379;gridss_CAS=0;gridss_CIPOS=0,3;gridss_CIRPOS=0,3;gridss_CQ=4060.03;gridss_EVENT=gridss291_6910;gridss_HOMLEN=3;gridss_HOMSEQ=ATT;gridss_IHOMPOS=0,3;gridss_PARID=gridss291_6910o;gridss_RAS=1;gridss_SB=0.40146;gridss_SC=1X2N1X502M;svaba_NUMPARTS=2;svaba_MATEID=1610290:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_23_33614001_33639001_3C;svaba_MATENM=0;svaba_SPAN=185017;svaba_HOMSEQ=ATT;svaba_EVDNC=ASSMB;brass_BAS=95;brass_SVCLASS=deletion;brass_MATEID=1955_1;brass_HOMSEQ=ATT;brass_IMPRECISE;brass_CIPOS=0,3;brass_CIEND=0,3;brass_HOMLEN=3;brass_BKDIST=185016;brass_TSRDS=A00227:74:HCWC7DSXX:1:1116:24560:9862,A00227:74:HCWC7DSXX:1:1169:23538:14638,A00227:74:HCWC7DSXX:1:1230:25870:35243,A00227:74:HCWC7DSXX:1:1404:26069:34491,A00227:74:HCWC7DSXX:1:1454:30870:19664,A00227:74:HCWC7DSXX:1:1544:16342:11005,A00227:74:HCWC7DSXX:1:1573:8214:18881,A00227:74:HCWC7DSXX:1:1603:4996:8015,A00227:74:HCWC7DSXX:1:1607:8919:30248,A00227:74:HCWC7DSXX:1:1665:7717:34522,A00227:74:HCWC7DSXX:1:1668:14516:19460,A00227:74:HCWC7DSXX:1:2162:28592:12085,A00227:74:HCWC7DSXX:1:2313:4851:30185,A00227:74:HCWC7DSXX:1:2350:21034:13839,A00227:74:HCWC7DSXX:1:2439:19479:29465,A00227:74:HCWC7DSXX:1:2470:9037:33113,A00227:74:HCWC7DSXX:1:2473:27326:34663,A00227:74:HCWC7DSXX:1:2523:17996:13150,A00227:74:HCWC7DSXX:1:2530:7419:20729,A00227:74:HCWC7DSXX:1:2611:6750:1031,A00333:42:HCKYCDSXX:3:1175:27181:30467,A00333:42:HCKYCDSXX:3:1516:15564:21746,A00333:42:HCKYCDSXX:3:1612:15275:18458,A00333:42:HCKYCDSXX:3:1648:5674:11882,A00333:42:HCKYCDSXX:3:2132:13955:28354,A00333:42:HCKYCDSXX:3:2134:12264:24298,A00333:42:HCKYCDSXX:3:2356:25084:1908,A00333:42:HCKYCDSXX:3:2366:13612:32236,A00333:42:HCKYCDSXX:3:2374:1127:35540,A00333:42:HCKYCDSXX:3:2409:2329:17769,A00333:42:HCKYCDSXX:3:2529:20654:19225,A00333:42:HCKYCDSXX:3:2533:10474:28526,A00333:42:HCKYCDSXX:4:1107:15311:27602,A00333:42:HCKYCDSXX:4:1215:11270:15562,A00333:42:HCKYCDSXX:4:1229:7229:25097,A00333:42:HCKYCDSXX:4:1309:25211:33849,A00333:42:HCKYCDSXX:4:1524:18602:24784,A00333:42:HCKYCDSXX:4:1618:22715:21073,A00333:42:HCKYCDSXX:4:2239:26612:2926,A00333:42:HCKYCDSXX:4:2269:25211:5478,A00333:42:HCKYCDSXX:4:2270:1163:12367,A00333:42:HCKYCDSXX:4:2527:8187:30984,A00333:42:HCKYCDSXX:4:2601:20871:1846,A00333:42:HCKYCDSXX:4:2611:25039:18865;brass_TRDS=A00227:74:HCWC7DSXX:1:2527:10312:34413/2,A00227:74:HCWC7DSXX:1:1331:9173:16689/1,A00227:74:HCWC7DSXX:1:1133:27127:22545/1,A00227:74:HCWC7DSXX:1:2470:9462:32816/2,A00227:74:HCWC7DSXX:1:2162:28592:12085/2,A00333:42:HCKYCDSXX:3:2134:12264:24298/1,A00227:74:HCWC7DSXX:1:1665:7717:34522/2,A00227:74:HCWC7DSXX:1:1102:28366:34867/2,A00333:42:HCKYCDSXX:3:1648:5674:11882/1,A00227:74:HCWC7DSXX:1:1204:5584:18584/1,A00227:74:HCWC7DSXX:1:1205:4906:28933/1,A00333:42:HCKYCDSXX:3:1175:27181:30467/2,A00333:42:HCKYCDSXX:3:2310:20193:9001/2,A00333:42:HCKYCDSXX:3:2309:19931:34601/2,A00227:74:HCWC7DSXX:1:1169:23538:14638/2,A00227:74:HCWC7DSXX:1:1454:30870:19664/2,A00333:42:HCKYCDSXX:4:2270:1163:12367/1,A00333:42:HCKYCDSXX:4:2527:8187:30984/1,A00227:74:HCWC7DSXX:1:1262:10556:12195/2,A00227:74:HCWC7DSXX:1:1405:19759:28260/1,A00227:74:HCWC7DSXX:1:2555:11767:18771/1,A00227:74:HCWC7DSXX:1:2473:27326:34663/2,A00333:42:HCKYCDSXX:4:1229:7229:25097/1,A00333:42:HCKYCDSXX:3:1516:15564:21746/1,A00227:74:HCWC7DSXX:1:2573:7988:15828/1,A00227:74:HCWC7DSXX:1:2414:19560:26287/1,A00227:74:HCWC7DSXX:1:2439:19479:29465/1,A00333:42:HCKYCDSXX:3:2356:25084:1908/1,A00227:74:HCWC7DSXX:1:1305:30825:1141/2,A00333:42:HCKYCDSXX:4:2239:26612:2926/2,A00333:42:HCKYCDSXX:3:2529:20654:19225/1,A00227:74:HCWC7DSXX:1:1573:8214:18881/2,A00227:74:HCWC7DSXX:1:2420:25916:20948/2,A00333:42:HCKYCDSXX:4:1146:19922:13260/1	gridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC	24:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:11:0:0:0:0:0:3.373:0:0:0,3.3,36.3:3.3:0:0:12:0:0	7:1370.01:82:91:0:0:0:0:0:0:0:116.91:8:116.91:0:0:0:0:0:0:4076.26:1388.24:5:44:714.03:38:603.97:71:-145.2:0:48:145.2,13.2,0:13.2:48:145.2:19:44:34
X	134753822	.	N	[X:134802856[N	.	LOWSUPPORT	END=134802856;Callers=svaba;NumCallers=1;CHR2=X;SVTYPE=INV;SVLEN=49034;STRANDS=--;svaba_DISC_MAPQ=45;svaba_NUMPARTS=0;svaba_MATEID=1637741:1;svaba_MAPQ=45;svaba_NM=-1;svaba_SCTG=23:134753822(-)-23:134802856(-)__23_134750001_134775001D;svaba_MATENM=-1;svaba_SPAN=49034;svaba_IMPRECISE;svaba_EVDNC=DSCRD	svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP	1.687:0:0:0,1.5,16.5:1.5:0:0:6	-26.83:10:0:26.9,0,26.9:26.9:10:26.83:22


================================================
FILE: tests/AnnotSV/test_19_Mouse/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail

cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}


#########################################
# Test with Mouse annotations 
#########################################

mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv" "./output/output.log"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -genomeBuild mm39 -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtBEDcol 4 &> "./output/output.log"

#...output columns annotation (November 08 2021 - 13:34):
#        AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_length;SV_type;score;Annotation_mode;CytoBand;Gene_name;Gene_count;Tx;Tx_start;Tx_end;Overlapped_tx_length;Overlapped_CDS_length;Overlapped_CDS_percent;Frameshift;Exon_count;Location;Location2;Dist_nearest_SS;Nearest_SS_type;Intersect_start;Intersect_end;RE_gene;GC_content_left;GC_content_right;Repeat_coord_left;Repeat_type_left;Repeat_coord_right;Repeat_type_right

if [ `grep -c "..AnnotSV is done with the analysis" "./output/output.log"` == 1 ] 
then
        echo "Ok"
else
        echo "error 1: Mouse annotation failed"
        exit 1
fi


# Cytoband annotations:
#######################

# $cut "./output/test_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;CytoBand"
#AnnotSV_ID      Annotation_mode CytoBand
#1_3038297_3156351_DEL_1 full    qA1
#1_94190001_95198035_DUP_1       full    qD
#1_94190001_95198035_DUP_1       split   qD
#...

# list = "CytoBand qA1 qD"
for v in `$cut "./output/test_tcl.annotated.tsv" "CytoBand" | sort -u`
do
        if ! exists_in_list "CytoBand qA1 qD" " " "$v"
        then
                echo "Error with Cytoband annotations"
                echo "error 1"
                exit 1
        fi
done

# Gene_name;Gene_count
######################
# $cut ./output/test_tcl.annotated.tsv "AnnotSV_ID;Annotation_mode;Gene_name;Gene_count"
#--> La ligne full indique 31 gènes


# Tx;Tx_start;Tx_end;Overlapped_tx_length;Overlapped_CDS_length;Overlapped_CDS_percent;Frameshift;Exon_count
############################################################################################################
#$cut ./output/test_tcl.annotated.tsv "AnnotSV_ID;Annotation_mode;Tx;Tx_start;Tx_end;Overlapped_tx_length;Overlapped_CDS_length;Overlapped_CDS_percent;Frameshift;Exon_count"
#AnnotSV_ID      Annotation_mode Tx      Tx_start        Tx_end  Overlapped_tx_length    Overlapped_CDS_length   Overlapped_CDS_percent  Frameshift      Exon_count
#1_3038297_3156351_DEL_1 full
#1_94190001_95198035_DUP_1       full
#1_94190001_95198035_DUP_1       split   NR_138578       94804954        94807341        2387    0       0       no      2
#1_94190001_95198035_DUP_1       split   NR_015525       94830119        94847167        17048   0       0       no      2
#1_94190001_95198035_DUP_1       split   NM_016702       95031816        95041998        10182   1245    100     no      11
#...
#--> 10 colonnes


# Location;Location2;Dist_nearest_SS;Nearest_SS_type
####################################################
#$cut ./output/test_tcl.annotated.tsv "AnnotSV_ID;Annotation_mode;Location;Location2;Dist_nearest_SS;Nearest_SS_type"
#AnnotSV_ID      Annotation_mode Location        Location2       Dist_nearest_SS Nearest_SS_type
#1_3038297_3156351_DEL_1 full
#1_94190001_95198035_DUP_1       full
#1_94190001_95198035_DUP_1       split   txStart-txEnd   UTR
#1_94190001_95198035_DUP_1       split   txStart-txEnd   UTR
#1_94190001_95198035_DUP_1       split   txStart-txEnd   5'UTR-3'UTR
#1_94190001_95198035_DUP_1       split   txStart-txEnd   5'UTR-3'UTR
#...
#1_94190001_95198035_DUP_1       split   exon4-txEnd     CDS-3'UTR       126     3'
#...

# list = "5'UTR-3'UTR CDS-3'UTR Location2 UTR"
for v in `$cut "./output/test_tcl.annotated.tsv" "Location2" | sort -u`
do
        if ! exists_in_list "5'UTR-3'UTR CDS-3'UTR Location2 UTR" " " "$v"
        then
                echo "Error with Location2 annotation"
                echo "error 1"
                exit 1
        fi
done


# Intersect_start;Intersect_end
###############################

#$cut ./output/test_tcl.annotated.tsv "AnnotSV_ID;Annotation_mode;Intersect_start;Intersect_end"
#AnnotSV_ID      Annotation_mode Intersect_start Intersect_end
#1_3038297_3156351_DEL_1 full
#1_94190001_95198035_DUP_1       full
#1_94190001_95198035_DUP_1       split   94804954        94807341
#1_94190001_95198035_DUP_1       split   94830119        94847167
#1_94190001_95198035_DUP_1       split   95031816        95041998
#1_94190001_95198035_DUP_1       split   94766705        94799483
#...


# GC content et repeat
#######################

#$cut ./output/test_tcl.annotated.tsv "AnnotSV_ID;Annotation_mode;GC_content_left;GC_content_right;Repeat_coord_left;Repeat_type_left;Repeat_coord_right;Repeat_type_right" | gr full

#1_3038297_3156351_DEL_1 full    0.290   0.335   1:3038379-3038968       Lx4B
#1_94190001_95198035_DUP_1       full    0.400   0.485                   1:95198045-95198078     (TCC)n


######################################################################################################################################################
######################################################################################################################################################
######################################################################################################################################################

# mm10/miRTargetLink_RefSeq_mm10.sorted.bed
# 1       20679055        20679076        mTL_miRNA       Adar;Bdnf;Clcn3;Cpeb1;Eif4e3;Fn1;Fstl1;Fzd7;Gja1;Hdac4;Hhip;Hmgb3;Id1;Id2;Id3;Igsf5;Map4k3;Meox2;Mmd;Mup10;Mup11;Mup12;Mup14;Mup17;Mup19;Nfat5;Notch3;Pax3;Pax7;Pdcd10;Pim1;Pola1;Rarb;Rnf170;Sh3bgrl;Smarcb1;Smarcd2;Spry1;Tgoln1;Timp3;Utrn

# test.RE.bed
# 1       20679054        20689076        DEL


# RE_gene
#########

#$ANNOTSV/bin/AnnotSV -SVinputFile ./input/test.RE.bed -genomeBuild mm10 -SVinputInfo 1 -outputFile ./output/test.RE_tcl.annotated.tsv -REselect1 0 -REselect2 0

#$cut ./output/test.RE_tcl.annotated.tsv "AnnotSV_ID;Annotation_mode;RE_gene" | gr full
#1_20679054_20689076__1  full    Acer1 (RE=mTL_miRNA);Adar (RE=mTL_miRNA);Bdnf (RE=mTL_miRNA);Clcn3 (RE=mTL_miRNA);Cpeb1 (RE=mTL_miRNA);Eif4e3 (RE=mTL_miRNA);Fn1 (RE=mTL_miRNA);Foxl2 (RE=mTL_miRNA);Fstl1 (RE=mTL_miRNA);Fzd7 (RE=mTL_miRNA);Gdf3 (RE=mTL_miRNA);Gja1 (RE=mTL_miRNA);Hdac4 (RE=mTL_miRNA);Hhip (RE=mTL_miRNA);Hmgb3 (RE=mTL_miRNA);Id1 (RE=mTL_miRNA);Id2 (RE=mTL_miRNA);Id3 (RE=mTL_miRNA);Igsf5 (RE=mTL_miRNA);Map4k3 (RE=mTL_miRNA);Meox2 (RE=mTL_miRNA);Mir133b (RE=RefSeq_promoter);Mmd (RE=mTL_miRNA);Mup10 (RE=mTL_miRNA);Mup11 (RE=mTL_miRNA);Mup12 (RE=mTL_miRNA);Mup14 (RE=mTL_miRNA);Mup17 (RE=mTL_miRNA);Mup19 (RE=mTL_miRNA);Nfat5 (RE=mTL_miRNA);Notch3 (RE=mTL_miRNA);Pax3 (RE=mTL_miRNA);Pax7 (RE=mTL_miRNA);Pdcd10 (RE=mTL_miRNA);Pim1 (RE=mTL_miRNA);Pitx3 (RE=mTL_miRNA);Pola1 (RE=mTL_miRNA);Ptbp2 (RE=mTL_miRNA);Rarb (RE=mTL_miRNA);Rnf170 (RE=mTL_miRNA);Sh3bgrl (RE=mTL_miRNA);Smarcb1 (RE=mTL_miRNA);Smarcd2 (RE=mTL_miRNA);Spry1 (RE=mTL_miRNA);Tgoln1 (RE=mTL_miRNA);Timp3 (RE=mTL_miRNA);Tnrc6b (RE=mTL_miRNA);Utrn (RE=mTL_miRNA);Zfp26 (RE=mTL_miRNA)


echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_19_Mouse/input/test.RE.bed
================================================
1	20679054	20689076	DEL


================================================
FILE: tests/AnnotSV/test_19_Mouse/input/test.bed
================================================
#chrom	start	end	SV type	score
1	3038297	3156351	DEL	0.025
1	94190001	95198035	DUP	0.001


================================================
FILE: tests/AnnotSV/test_20_MitochondrialSV/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


# Check with a bed containing 2 SV on MT chromosome
# input/test.bed
# M       649     1603
# M       987     1611

mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -genomeBuild GRCh37

test=`$cut "./output/test_tcl.annotated.tsv" "AnnotSV type"`

if [ `echo $test | grep -c "No column to display"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: AnnotSV should not annotate Sv on MT chromosome"
        exit 1
fi


echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_20_MitochondrialSV/input/test.bed
================================================
M	649	1603	
M	987	1611	


================================================
FILE: tests/AnnotSV/test_21_ExternalGeneAnnotationFile/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


#####################################################
## External Gene Annotation File (custom annotations)
#####################################################


# -> Copy "./input/user_annotations.tsv" dans $ANNOTSV/share/doc/AnnotSV/Annotations_Human/Users/ 
#################################################################################################
cp "./input/user_annotations.tsv" $ANNOTSV/share/AnnotSV/Annotations_Human/Users/

# ./input/user_annotations.tsv
##############################
# genes   	del.score       	dup.score       	cnv.score
# ARHGAP19      0.163145773187885       0.339478078191488       0.339117350686952
# PYROXD2 	0.422491880377013       1.23836979707209        1.10456867580225
# HPS1    	1.07868410168786        1.32773222664126        1.53322662103495



# configfile
############
# The external annotation colums will be added only if they are reported in the configfile
# => Use of ./input/configfile

mkdir -p ./output
rm -f "./output/input_tcl.annotated.tsv" "./output/output.log"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input.bed" -outputFile "./output/input_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37 &> "./output/output.log"
#                ...user_annotations.tsv
#                (3 gene identifiers and 3 annotations columns: del.score, dup.score, cnv.score)

if [ `grep -c "annotations columns: del.score, dup.score, cnv.score" "./output/output.log"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: External annotation not used"
        exit 1
fi

#del.score       dup.score       cnv.score
#0.163145773187885       0.339478078191488       0.339117350686952
#0.163145773187885       0.339478078191488       0.339117350686952
if [ `$cut "./output/input_tcl.annotated.tsv" "del.score;dup.score;cnv.score;Gene_name" | grep -c "cnv.score"`  == 1 ]
then
        echo "Ok"
else
        echo "error 1: END coordinates for bracketed SV not good with -includeCI set to 1"
        exit 1
fi


# -> Nettoyage
##############
rm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/user_annotations.tsv



echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_21_ExternalGeneAnnotationFile/input/configfile
================================================
# This file is used to simplify the configuration of AnnotSV.
# Anything behind a hashtag is considered as a comment
# Please, feel free to change the AnnotSV options.

#------------------
# AnnotSV Options :
#------------------


-genomeBuild:           GRCh37

-overlap:               70

-promoterSize:          500

-SVinputInfo:           1

-SVminSize:             50

-metrics:               "us"

-minTotalNumber:        "500"

-overwrite:             "1"

-reciprocal:            "0"

-annotationMode:        "both"

-snvindelPASS:          "0"


#------------------------
# AnnotSV Output columns:
#------------------------
# Output column names are listed below.
# In order to disable default annotations provided by AnnotSV, some column names (the ones that are not marked with an *) can be commented with a hash character ("#") by the user.
del.score
dup.score
cnv.score


================================================
FILE: tests/AnnotSV/test_21_ExternalGeneAnnotationFile/input/input.bed
================================================
10	98247690	99268250	DEL


================================================
FILE: tests/AnnotSV/test_21_ExternalGeneAnnotationFile/input/user_annotations.tsv
================================================
genes	del.score	dup.score	cnv.score
ARHGAP19	0.163145773187885	0.339478078191488	0.339117350686952
PYROXD2	0.422491880377013	1.23836979707209	1.10456867580225
HPS1	1.07868410168786	1.32773222664126	1.53322662103495


================================================
FILE: tests/AnnotSV/test_22_knotAnnotSV_41SV/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}


# The "KNOTANNOTSV" environment variable should exist
#####################################################
#####################################################
if [ -z ${KNOTANNOTSV+x} ] 
then 
	echo "KNOTANNOTSV is unset"
        exit 1
	
else 
	echo "KNOTANNOTSV is set to '$KNOTANNOTSV'"
fi


# Check 1: file containing different SV types: "test.41_SV.bed"
###############################################################
###############################################################
mkdir -p ./output
rm -f "./output/test.41_SV_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.41_SV.bed" -svtBedCol 4 -outputFile "./output/test.41_SV_tcl.annotated.tsv" -hpo "HP:0001156,HP:0001363,HP:0011304,HP:0010055" -genomeBuild GRCh37

for v in `$cut ./output/test.41_SV_tcl.annotated.tsv "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 5 ACMG_class full=1 full=2 full=3 full=5 full=NA NA" " " "$v"
        then
                echo "Error with ./input/test.41_SV.bed"
                echo "error 1"
                exit 1
        fi
done

## Creation of the tmp yaml file ("./output/config_41_SV_AnnotSV.tmp.yaml")
rm -f "./output/config_41_SV_AnnotSV.tmp.yaml"
$ANNOTSV/tests/AnnotSV/scripts/complete_KnotAnnotSV_YAML_test.tcl "./output/test.41_SV_tcl.annotated.tsv" "$KNOTANNOTSV/config_AnnotSV.yaml" "./output/config_41_SV_AnnotSV.tmp.yaml"

if [ ! -f "./output/config_41_SV_AnnotSV.tmp.yaml" ] 
then
	echo "File ./output/config_41_SV_AnnotSV.tmp.yaml does not exist"
        echo "error 1"
        exit 1
fi

## knotAnnotSV: creation of "./output/test.41_SV_tcl.annotated.html"
rm -f "./output/test.41_SV_tcl.annotated.html"
perl $KNOTANNOTSV/knotAnnotSV.pl --annotSVfile "./output/test.41_SV_tcl.annotated.tsv" --configFile "./output/config_41_SV_AnnotSV.tmp.yaml" --outDir "./output"

if [ ! -f "./output/test.41_SV_tcl.annotated.html" ]
then
        echo "File ./output/test.41_SV_tcl.annotated.html does not exist"
        echo "error 1"
        exit 1
fi





# Check 2: distributed knot example
###################################
###################################

# ./input/test.7_SV.bed <=> "$KNOTANNOTSV/example/example.bed"
rm -f "./output/test.7_SV_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.7_SV.bed" -svtBedCol 4 -outputFile "./output/test.7_SV_tcl.annotated.tsv" -hpo "HP:0001156,HP:0001363,HP:0011304,HP:0010055" -genomeBuild GRCh37

for v in `$cut "./output/test.7_SV_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 3 5 ACMG_class full=1 full=3 full=5 full=NA NA" " " "$v"
        then
                echo "Error with ./input/test.7_SV.bed"
                echo "error 1"
                exit 1
        fi
done

## Creation of the tmp yaml file ("./output/config_7_SV_AnnotSV.tmp.yaml")
rm -f "./output/config_7_SV_AnnotSV.tmp.yaml"
$ANNOTSV/tests/AnnotSV/scripts/complete_KnotAnnotSV_YAML_test.tcl "./output/test.7_SV_tcl.annotated.tsv" "$KNOTANNOTSV/config_AnnotSV.yaml" "./output/config_7_SV_AnnotSV.tmp.yaml"

if [ ! -f "./output/config_7_SV_AnnotSV.tmp.yaml" ]
then
        echo "File ./output/config_7_SV_AnnotSV.tmp.yaml does not exist"
        echo "error 1"
        exit 1
fi

## knotAnnotSV: creation of "./output/test.7_SV_tcl.annotated.html"
rm -f "./output/test.7_SV_tcl.annotated.html"
perl $KNOTANNOTSV/knotAnnotSV.pl --annotSVfile "./output/test.7_SV_tcl.annotated.tsv" --configFile "./output/config_7_SV_AnnotSV.tmp.yaml" --outDir "./output"

if [ ! -f "./output/test.7_SV_tcl.annotated.html" ]
then
        echo "File ./output/test.7_SV_tcl.annotated.html does not exist"
        echo "error 1"
        exit 1
fi



echo "ok - Finished"






================================================
FILE: tests/AnnotSV/test_22_knotAnnotSV_41SV/input/config_AnnotSV.tmp.yaml
================================================
##############################################################################################
# knotAnnotSV 1.1                                                                            #
#                                                                                            #
# knotAnnotSV: Creation of a customizable html file to visualize, filter                     # 
#                   and analyze an AnnotSV output                                            #
#                                                                                            #
# Author: Thomas Guignard 2020                                                               #
#                                                                                            #
# Copyright (C) 2020-2021 Thomas Guignard (t-guignard@chu-montpellier.fr)                    #
#                                                                                            #
# This is part of knotAnnotSV source code.                                                   #
#                                                                                            #
# This program is free software; you can redistribute it and/or                              #
# modify it under the terms of the GNU General Public License                                #
# as published by the Free Software Foundation; either version 3                             #
# of the License, or (at your option) any later version.                                     #
#                                                                                            #
# This program is distributed in the hope that it will be useful,                            #
# but WITHOUT ANY WARRANTY; without even the implied warranty of                             #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                              #
# GNU General Public License for more details.                                               #
#                                                                                            #
# You should have received a copy of the GNU General Public License                          #
# along with this program; If not, see <http://www.gnu.org/licenses/>.                       #
##############################################################################################
---
#### General annotations on the SV
##################################
AnnotSV_ID:    #mandatory in first position
    POSITION: 1
    RENAME: "AnnotSV ID"
ACMG_class:  # mandatory   
    POSITION: 2
    RENAME: "ACMG class"
    HEADERTIPS: "SV ranking class (from 1 to 5) following the 2020 joint consensus recommendation of ACMG and ClinGen"
    COMMENTLIST:
        - AnnotSV_ranking_score
        - AnnotSV_ranking_criteria
SV_type:
    POSITION: 3
    RENAME: "SV type"
    HEADERTIPS: "Type of the SV (DEL, DUP...)"
    COMMENTLIST:
        - SV_length
        - Gene_count

Annotation_mode: #mandatory
    POSITION: 4 
    RENAME: "Annotation mode"
    HEADERTIPS: "Type of annotation lines generated:<br>
- annotation on the SV full length (full)<br>
- annotation on each gene overlapped by the SV (split)"

### Gene annotations
####################
Gene_name:     # mandatory
    POSITION: 5
    RENAME: "Gene name"
    HEADERTIPS: "Gene symbol"
    COMMENTLIST:
        - LOEUF_bin
        - GnomAD_pLI
        - ExAC_pLI
        - HI
        - TS
        - DDD_HI_percent
        - ACMG
        - ExAC_cnvZ
        - ExAC_delZ
        - ExAC_dupZ
        - ExAC_synZ
        - ExAC_misZ
        - DDD_status
        - DDD_mode
        - DDD_consequence
        - DDD_disease
        - DDD_pmid
        - GenCC_disease
        - GenCC_moi
        - GenCC_classification
        - GenCC_pmid
Location:
    POSITION: 6
    RENAME: "Location"
    HEADERTIPS: "Hover your mouse to highlight SV location annotations in the gene"
    COMMENTLIST:
        - CytoBand
        - Location2
        - Tx
        - Tx_start
        - Tx_end
        - Exon_count
        - Overlapped_tx_length
        - Overlapped_CDS_length
        - Overlapped_CDS_percent
        - Frameshift
        - Dist_nearest_SS
        - Nearest_SS_type
        - Intersect_start
        - Intersect_end
OMIM_ID:
    POSITION: 7
    RENAME: "OMIM ID"
    HEADERTIPS: "Hover your mouse to highlight OMIM annotations"
    COMMENTLIST:
        - OMIM_phenotype
        - OMIM_inheritance
        - OMIM_morbid
        - OMIM_morbid_candidate
Exomiser_gene_pheno_score:
    POSITION: 8
    RENAME: "Exomiser score"
    HEADERTIPS: "Show how close each overlapped gene is to the patient phenotype<br>
    Highly specific and consistent phenotype: score > 0.7<br>
    Consistent phenotype: score > 0.5"
    COMMENTLIST:
        - Human_pheno_evidence
        - Mouse_pheno_evidence
        - Fish_pheno_evidence

### Annotations done with regulatory elements
#############################################
RE_gene:
    POSITION: 9
    RENAME: "Overlapped regulatory elements"
    HEADERTIPS: "Report the name of the genes potentially badly regulated"

### Annotations done with pathogenic SV
#######################################
P_gain_coord:
    POSITION: 10
    RENAME: "Pathogenic SV"
    HEADERTIPS: "Known pathogenic genes or genomic regions (with the same SV type; from ClinVar, ClinGen, dbVar, OMIM) completely overlapped with the SV to annotate"
    COMMENTLIST:
        - P_gain_source
        - P_gain_phen
        - P_gain_hpo
        - P_loss_coord
        - P_loss_source
        - P_loss_phen
        - P_loss_hpo

### Annotations done with pathogenic snv/indel
##############################################
P_snvindel_nb:
    POSITION: 11
    RENAME: "Number of pathogenic SNV/indel overlapped"
    HEADERTIPS: "Pathogenic SNV/indel (from ClinVar) completely overlapped with the SV to annotate"
    COMMENTLIST:
        - P_snvindel_phen

### Annotations done with benign SV
###################################
B_gain_source:
    POSITION: 12
    RENAME: "Benign SV"
    HEADERTIPS: "Benign genomic regions (with the same SV type; from gnomAD, ClinVar, ClinGen, DGV, DDD, 1000g, IMH) completely overlapping the SV to annotate"
    COMMENTLIST:
        - B_gain_coord
        - B_gain_AFmax
        - B_loss_source
        - B_loss_coord
        - B_loss_AFmax

### Annotations of the breakpoints
##################################
ENCODE_blacklist_characteristics_left:
    POSITION: 13
    RENAME: "Left breakpoint annotations"
    HEADERTIPS: "Hover your mouse to highlight the left SV breakpoint (+/- 100bp) annotations"
    COMMENTLIST:
        - ENCODE_blacklist_left
        - SegDup_left
        - Repeat_coord_left
        - Repeat_type_left
        - Gap_left
        - GC_content_left

ENCODE_blacklist_characteristics_right:
    POSITION: 14
    RENAME: "Right breakpoint annotations"
    HEADERTIPS: "Hover your mouse to highlight the right SV breakpoint (+/- 100bp) annotations"
    COMMENTLIST:
        - ENCODE_blacklist_right
        - SegDup_right
        - Repeat_coord_right
        - Repeat_type_right
        - Gap_right
        - GC_content_right

TAD_coordinate:
    POSITION: 0
ENCODE_experiment:
    POSITION: 0
Cosmic_ID:
    POSITION: 0
Cosmic_mut_typ:
    POSITION: 0
compound-htz(sample):
    POSITION: 0
Count_hom(sample):
    POSITION: 0
Count_htz(sample):
    POSITION: 0
Count_htz/allHom(sample):
    POSITION: 0
Count_htz/total(cohort):
    POSITION: 0
Count_total(cohort):
    POSITION: 0


Biologist_annotation: # additional user column
    POSITION: 15

Biologist_ranking: # additional user column
    POSITION: 16



================================================
FILE: tests/AnnotSV/test_22_knotAnnotSV_41SV/input/test.41_SV.bed
================================================
# chrom	Start	End	Variant_type	Biologist_annotation	Biologist_ranking
1	149041933	149209289	DEL		Benign
1	196756231	196799302	DEL		Benign
1	248738898	248785562	DEL		Benign
2	242865920	243028452	DEL		Benign
3	62939217	65268743	DEL	VOUS in 2017, reclassified in 2020	Pathogenic
3	97483033	97487074	DEL	BBS3/ARL6 promotor overlapped	Pathogenic
3	195419168	195472855	DEL		Benign
4	71552	9371067	DEL	4p- syndrom	Pathogenic
4	69392545	69462438	DEL		Benign
5	723194	777000	DUP		Benign
5	88774328	91802402	DEL	TAD MEF2C	Pathogenic
6	266079	362290	DEL		Benign
6	29854870	29896710	DEL		Benign
6	78979172	79023328	DEL		Benign
7	33397467	33397607	DEL	BBS9 inframe	Pathogenic
7	38296176	38352444	DEL		Benign
7	72726578	74139390	DEL	Williams syndrom	Pathogenic
8	7169490	7753583	DUP		Benign
8	7169490	7753583	DEL		Benign
8	56986129	57169684	DEL	VOUS in 2017, reclassified in 2020	Pathogenic
8	141035363	141061798	DEL	DI AR	Pathogenic
10	46976157	47590995	DUP		Benign
11	66287088	66288847	DEL	BBS1 internal frameshift	Pathogenic
12	63935481	64130626	DEL	DPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)	Pathogenic
12	63935481	64130626	DUP	DPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)	Pathogenic
14	22323879	22952279	DEL		Benign
14	74001651	74022324	DEL		Benign
14	107152092	107180095	DEL		Benign
15	20432851	22765687	DUP		Benign
15	20564608	22409391	DEL		Benign
15	34735949	34806953	DEL		Benign
16	1565629	1571297	DUP	IFT140 tandem duplication 	Pathogenic
16	31955076	34702366	DUP		Benign
16	32471625	33487672	DEL		Benign
16	33371443	34285848	DUP		Benign
16	34493206	34702366	DUP		Benign
17	14100118	15442066	DUP	PMP22 (CMT1A)	Pathogenic
17	34437475	34817481	DUP		Benign
17	44171888	44297143	DUP		Benign
22	18894835	21464119	DEL	Di George syndrom	Pathogenic
X	53250653	53856257	DUP	HUWE1	Pathogenic


================================================
FILE: tests/AnnotSV/test_22_knotAnnotSV_41SV/input/test.7_SV.bed
================================================
# chrom	Start	End	Variant_type	Biologist_annotation	Biologist_ranking
1	149041933	149209289	DEL		Benign
4	71552	9371067	DEL	4p- syndrom	Pathogenic
5	723194	777000	DUP		Benign
11	66287088	66288847	DEL	BBS1 internal frameshift	Pathogenic
15	34735949	34806953	DEL		Benign
16	1565629	1571297	DUP	IFT140 tandem duplication 	Pathogenic
X	53250653	53856257	DUP	HUWE1	Pathogenic


================================================
FILE: tests/AnnotSV/test_23_Exomiser/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"



####################################
# Checking of Exomiser
####################################


# Test with 1 SV:
#################

# HPO terms = HP:0001156,HP:0001363,HP:0011304,HP:0010055
# Gene positively scored with these HPO = FGFR2 (Entrez Gene: 2263)

# GRCh37:
mkdir -p ./output
rm -f "./output/GRCh37-1SV_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/GRCh37-1SV.vcf" -outputFile "./output/GRCh37-1SV_tcl.annotated.tsv" -genomeBuild GRCh37 -hpo "HP:0001156,HP:0001363,HP:0011304,HP:0010055"

annotations=`$cut "./output/GRCh37-1SV_tcl.annotated.tsv" "Annotation_mode;Gene_name;Exomiser_gene_pheno_score;Human_pheno_evidence;Mouse_pheno_evidence;Fish_pheno_evidence"`
# Annotation_mode Gene_name       Exomiser_gene_pheno_score       Human_pheno_evidence    Mouse_pheno_evidence    Fish_pheno_evidence
# full    FGFR2;WDR11;WDR11-AS1   1.0000
#split   FGFR2   1.0000  Brachydactyly;Broad hallux;Broad metatarsal;Broad thumb;Craniosynostosis;Jackson-Weiss syndrome Brachydactyly;Broad hallux;Broad thumb;Craniosynostosis;abnormal sternum morphology;premature cranial suture closure
# split   WDR11   0.6748  Broad hallux;Kallmann syndrome;Pes cavus        Brachydactyly;Broad hallux;Broad thumb;Craniosynostosis;decreased bone mineralization;syndactyly
# split   WDR11-AS1       0.0000

if [ `echo $annotations | grep -c "Craniosynostosis"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: Exomiser does not work (GRCh37-1SV)"
        exit 1
fi


# GRCh38:
# => Exomiser annote les gènes (build independant), on doit avoir exactement le même résultat
rm -f "./output/GRCh38-1SV_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/GRCh38-1SV.vcf" -outputFile "./output/GRCh38-1SV_tcl.annotated.tsv" -genomeBuild GRCh38 -hpo "HP:0001156,HP:0001363,HP:0011304,HP:0010055"

annotations=`$cut "./output/GRCh38-1SV_tcl.annotated.tsv" "Annotation_mode;Gene_name;Exomiser_gene_pheno_score;Human_pheno_evidence;Mouse_pheno_evidence;Fish_pheno_evidence"`
if [ `echo $annotations | grep -c "Craniosynostosis"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: Exomiser does not work (GRCh38-1SV)"
        exit 1
fi


# Test with > 6000 SV:
######################

# GRCh37:
# Timing: 20 min
rm -f "./output/GRCh37-multi_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/GRCh37-multiSV.vcf" -outputFile "./output/GRCh37-multi_tcl.annotated.tsv" -genomeBuild GRCh37 -hpo "HP:0001156,HP:0001363,HP:0011304,HP:0010055"

annotations=`$cut "./output/GRCh37-multi_tcl.annotated.tsv" "Annotation_mode;Gene_name;Exomiser_gene_pheno_score;Human_pheno_evidence;Mouse_pheno_evidence;Fish_pheno_evidence" | grep PRDM16`
if [ `echo $annotations | grep -c "Craniosynostosis"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: Exomiser does not work (GRCh37-multiSV)"
        exit 1
fi


# GRCh38:
# => Exomiser annote les gènes (build independant), on doit avoir exactement le même résultat
# Timing: 20 min
rm -f "./output/GRCh38-multi_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/GRCh38-multiSV.vcf" -outputFile "./output/GRCh38-multi_tcl.annotated.tsv" -genomeBuild GRCh38 -hpo "HP:0001156,HP:0001363,HP:0011304,HP:0010055"

annotations=`$cut "./output/GRCh38-multi_tcl.annotated.tsv" "Annotation_mode;Gene_name;Exomiser_gene_pheno_score;Human_pheno_evidence;Mouse_pheno_evidence;Fish_pheno_evidence" | grep PRDM16`
if [ `echo $annotations | grep -c "Craniosynostosis"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: Exomiser does not work (GRCh38-multiSV)"
        exit 1
fi




echo "ok - Finished"





================================================
FILE: tests/AnnotSV/test_23_Exomiser/input/GRCh37-1SV.vcf
================================================
##fileformat=VCFv4.2
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample1
10	123237900	569156:2	A	]10:122457304]C	72	PASS	EVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62


================================================
FILE: tests/AnnotSV/test_23_Exomiser/input/GRCh37-multiSV.vcf
================================================
##fileformat=VCFv4.2
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample1
1	1477855	389:1	G	]1:1477984]G	37	PASS	EVDNC=ASSMB;INSERTION=TGT;MAPQ=60;MATEID=389:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_1470001_1495001_12C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
1	1477984	389:2	A	A[1:1477855[	37	PASS	EVDNC=ASSMB;INSERTION=TGT;MAPQ=60;MATEID=389:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_1470001_1495001_12C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
1	1934936	523:1	T	T[1:1935574[	49	PASS	DISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=GTGTTAGGTTGTAGGTACACAGGT;MAPQ=60;MATEID=523:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_1_1911001_1936001_35C;SPAN=638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:16:4:-49.51:49.51
1	1935574	523:2	G	]1:1934936]G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGTTAGGTTGTAGGTACACAGGT;MAPQ=60;MATEID=523:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_1_1911001_1936001_35C;SPAN=638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:16:4:-49.51:49.51
1	3176048	1705:1	C	]1:3176290]C	16	PASS	EVDNC=ASSMB;HOMSEQ=CATCCATCCATCCATCCATCCATC;MAPQ=60;MATEID=1705:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_3160501_3185501_4C;SPAN=242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22
1	3176290	1705:2	C	C[1:3176048[	16	PASS	EVDNC=ASSMB;HOMSEQ=CATCCATCCATCCATCCATCCATC;MAPQ=60;MATEID=1705:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_3160501_3185501_4C;SPAN=242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22
1	4018528	1874:1	G	G[1:4019251[	22	PASS	EVDNC=ASSMB;INSERTION=CTC;MAPQ=60;MATEID=1874:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_4018001_4043001_10C;SPAN=723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
1	4019251	1874:2	T	]1:4018528]T	22	PASS	EVDNC=ASSMB;INSERTION=CTC;MAPQ=60;MATEID=1874:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_4018001_4043001_10C;SPAN=723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
1	6937887	655207:1	C	C[12:132742761[	20	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=655207:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:6937887(+)-12:132742761(-)__12_132741001_132766001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36
1	7429774	888671:1	T	T[20:61337291[	16	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=888671:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:7429774(+)-20:61337291(-)__20_61323501_61348501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:59:16.4:16.4,0,131.9:0:10:-16.43:21.68
1	9045606	3054:1	G	]1:9049477]G	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCA;MAPQ=60;MATEID=3054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_9040501_9065501_7C;SPAN=3871;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:26:7.5:82.5,7.5,0:16:17:-82.52:82.52
1	9049477	3054:2	A	A[1:9045606[	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCA;MAPQ=60;MATEID=3054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_9040501_9065501_7C;SPAN=3871;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:26:7.5:82.5,7.5,0:16:17:-82.52:82.52
1	13299454	4064:1	G	G[6:33062526[	46	PASS	DISC_MAPQ=13;EVDNC=TSI_L;MAPQ=23;MATEID=4064:2;MATENM=11;NM=1;NUMPARTS=3;REPSEQ=GG;SCTG=c_1_13279001_13304001_4C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:13:5:-46.21:46.21
1	16621374	4878:1	C	[1:16951695[C	16	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=4878:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:16621374(-)-1:16951695(-)__1_16611001_16636001D;SPAN=330321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:37:16.1:16.1,0,75.5:0:8:-16.01:18.29
1	16725253	63373:1	A	[1:234776441[A	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GCAGAAGCCGGCGGGATGGGGC;MAPQ=60;MATEID=63373:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_234759001_234784001_38C;SPAN=218051188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:81:22:22.5:247.5,22.5,0:52:53:-247.6:247.6
1	16951695	4878:2	T	[1:16621374[T	16	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=4878:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:16621374(-)-1:16951695(-)__1_16611001_16636001D;SPAN=330321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:37:16.1:16.1,0,75.5:0:8:-16.01:18.29
1	23392332	6511:1	G	]1:23392792]G	29	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=6511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:23392332(-)-1:23392792(+)__1_23373001_23398001D;SPAN=460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3
1	23392792	6511:2	C	C[1:23392332[	29	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=6511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:23392332(-)-1:23392792(+)__1_23373001_23398001D;SPAN=460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3
1	23628304	6591:1	G	G[1:23628951[	49	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=GCCCACCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=6591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_23618001_23643001_9C;SPAN=647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:11:6:-49.51:49.51
1	23628951	6591:2	G	]1:23628304]G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCCACCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=6591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_23618001_23643001_9C;SPAN=647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:11:6:-49.51:49.51
1	24832212	6918:1	T	T[1:24835019[	46	PASS	EVDNC=ASSMB;HOMSEQ=TTGATTTTTTATTTTT;MAPQ=60;MATEID=6918:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_1_24818501_24843501_5C;SPAN=2807;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
1	24835019	6918:2	T	]1:24832212]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TTGATTTTTTATTTTT;MAPQ=60;MATEID=6918:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_1_24818501_24843501_5C;SPAN=2807;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
1	25287187	7022:1	C	]1:25405599]C	23	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=7022:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287187(-)-1:25405599(+)__1_25382001_25407001D;SPAN=118412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
1	25287371	7007:1	G	G]1:25287867]	19	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=7007:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287371(+)-1:25287867(+)__1_25284001_25309001D;SPAN=496;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
1	25287867	7007:2	C	C]1:25287371]	19	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=7007:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287371(+)-1:25287867(+)__1_25284001_25309001D;SPAN=496;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
1	25405599	7022:2	A	A[1:25287187[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=7022:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287187(-)-1:25405599(+)__1_25382001_25407001D;SPAN=118412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
1	28189261	847363:1	T	T]19:23845125]	23	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=847363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:28189261(+)-19:23845125(+)__19_23838501_23863501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
1	28410089	7545:1	C	]1:28410215]C	26	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=7545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_28395501_28420501_15C;SPAN=126;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
1	28410215	7545:2	C	C[1:28410089[	26	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=7545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_28395501_28420501_15C;SPAN=126;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
1	29279188	307504:1	T	T]5:110659597]	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=307504:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29279188(+)-5:110659597(+)__5_110642001_110667001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
1	29552243	7974:1	N	N]1:30655921]	20	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=7974:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29552243(+)-1:30655921(+)__1_30649501_30674501D;SPAN=1103678;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
1	30655921	7974:2	G	G]1:29552243]	20	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=7974:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29552243(+)-1:30655921(+)__1_30649501_30674501D;SPAN=1103678;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
1	32790315	122996:1	T	T]2:161095746]	19	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=122996:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:32790315(+)-2:161095746(+)__2_161087501_161112501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
1	33010843	14040:1	A	A[1:58630799[	28	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=14040:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:33010843(+)-1:58630799(-)__1_58628501_58653501D;SPAN=25619956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81
1	33050733	8608:1	A	]7:24409092]A	99	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=8608:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_33050501_33075501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:32:10.2:112.2,10.2,0:37:0:-112.2:112.2
1	35161530	8994:1	C	C[1:35161848[	82	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGGC;MAPQ=60;MATEID=8994:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_35157501_35182501_39C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:13:7.5:82.5,7.5,0:22:7:-82.52:82.52
1	35161848	8994:2	G	]1:35161530]G	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGC;MAPQ=60;MATEID=8994:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_35157501_35182501_39C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:13:7.5:82.5,7.5,0:22:7:-82.52:82.52
1	35259113	739080:1	A	A[15:76800145[	92	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=A;MAPQ=33;MATEID=739080:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_76783001_76808001_25C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:29:9:-92.42:92.42
1	36267575	9227:1	C	C]1:36269076]	17	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=9227:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36267575(+)-1:36269076(+)__1_36260001_36285001D;SPAN=1501;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
1	36267982	9229:1	C	[1:36268906[C	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGCCTGGCCAATATGGTGAAACCCCATCTCTACT;MAPQ=60;MATEID=9229:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_36260001_36285001_7C;SPAN=924;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:18:7:-69.32:69.32
1	36268906	9229:2	A	[1:36267982[A	69	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCAGCCTGGCCAATATGGTGAAACCCCATCTCTACT;MAPQ=60;MATEID=9229:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_36260001_36285001_7C;SPAN=924;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:18:7:-69.32:69.32
1	36269076	9227:2	T	T]1:36267575]	17	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=9227:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36267575(+)-1:36269076(+)__1_36260001_36285001D;SPAN=1501;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
1	36958707	9337:1	C	C[1:36960147[	66	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=9337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36958707(+)-1:36960147(-)__1_36946001_36971001D;SPAN=1440;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:4:6:66,6,0:0:22:-66.02:66.02
1	36960147	9337:2	G	]1:36958707]G	66	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=9337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36958707(+)-1:36960147(-)__1_36946001_36971001D;SPAN=1440;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:4:6:66,6,0:0:22:-66.02:66.02
1	37472656	90165:1	T	]2:68687747]T	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATTAG;MAPQ=60;MATEID=90165:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_14C;SPAN=-1;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:9:10:-42.24:42.24
1	37472775	90166:1	G	G[2:68687751[	56	PASS	EVDNC=ASSMB;HOMSEQ=CCAG;MAPQ=60;MATEID=90166:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_111C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:18:5.1:56.1,5.1,0:19:0:-56.11:56.11
1	39504305	9980:1	T	]1:39504874]T	65	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=9980:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:39504305(-)-1:39504874(+)__1_39494001_39519001D;SPAN=569;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:0:23:-66.36:66.36
1	39504874	9980:2	G	G[1:39504305[	65	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=9980:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:39504305(-)-1:39504874(+)__1_39494001_39519001D;SPAN=569;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:0:23:-66.36:66.36
1	43593625	10849:1	G	G]1:43594215]	69	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGGCACGGTGGCT;INSERTION=AC;MAPQ=60;MATEID=10849:2;MATENM=0;NM=3;NUMPARTS=3;SCTG=c_1_43585501_43610501_3C;SECONDARY;SPAN=590;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32
1	43594215	10849:2	G	G]1:43593625]	69	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGGCACGGTGGCT;INSERTION=AC;MAPQ=60;MATEID=10849:1;MATENM=3;NM=0;NUMPARTS=3;SCTG=c_1_43585501_43610501_3C;SECONDARY;SPAN=590;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32
1	44098924	160041:1	T	]3:41609700]T	29	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=160041:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:44098924(-)-3:41609700(+)__3_41601001_41626001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71
1	44104205	160035:1	T	T[3:41580812[	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=160035:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_41576501_41601501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
1	44779028	11200:1	T	T[1:44779477[	17	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=11200:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_44761501_44786501_16C;SPAN=449;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39
1	44779477	11200:2	C	]1:44779028]C	17	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=11200:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_44761501_44786501_16C;SPAN=449;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39
1	45703368	11370:1	T	T[Un_KN707671v1_decoy:1[	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=11370:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_45692501_45717501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:19:6:66,6,0:22:0:-66.02:66.02
1	46939969	11731:1	A	[1:47138878[A	38	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=11731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:46939969(-)-1:47138878(-)__1_47138001_47163001D;SPAN=198909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:0:13:-39.01:39.01
1	47138878	11731:2	A	[1:46939969[A	38	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=11731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:46939969(-)-1:47138878(-)__1_47138001_47163001D;SPAN=198909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:0:13:-39.01:39.01
1	51609009	12475:1	A	]1:51840062]A	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=12475:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_51817501_51842501_2C;SPAN=231053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:8:8:-26.55:26.57
1	51840062	12475:2	A	A[1:51609009[	26	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=12475:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_51817501_51842501_2C;SPAN=231053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:8:8:-26.55:26.57
1	53952867	12975:1	T	]1:56216061]T	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=12975:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_65C;SPAN=2263194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:39:45.2:45.2,0,51.8:9:14:-45.15:45.19
1	53952995	12977:1	C	]18:6317356]C	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_190C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:52:15.2:15.2,0,114.2:6:3:-15.09:19.61
1	53953226	12984:1	G	G[9:25849461[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12984:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:6:6:-22.05:23.72
1	53953310	12986:1	T	T]1:53953873]	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=12986:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53953310(+)-1:53953873(+)__1_53949001_53974001D;SPAN=563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
1	53953873	12986:2	A	A]1:53953310]	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=12986:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53953310(+)-1:53953873(+)__1_53949001_53974001D;SPAN=563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
1	53953907	866065:1	C	[20:21065659[C	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=866065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21045501_21070501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:9:4:-33.83:33.83
1	53954234	13008:1	T	[8:1724902[T	26	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=A;INSERTION=AGCCCAGAGACAGAGCTTTCAAGGTGCCTGCTCAGTTTATGAGCCAAGTTTCTATTCTTTTCTGCATGTGTTT;MAPQ=60;MATEID=13008:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_53949001_53974001_174C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:93:26.9:26.9,0,205.1:16:3:-26.67:34.81
1	53954236	260688:1	A	A[4:149687001[	30	PASS	EVDNC=ASSMB;HOMSEQ=ACATAA;MAPQ=60;MATEID=260688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149670501_149695501_34C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
1	53954306	578367:1	C	[11:20762949[C	39	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=578367:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_20751501_20776501_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:9:3.6:39.6,3.6,0:11:3:-39.61:39.61
1	53954324	13015:1	C	]13:56018554]C	0	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=13015:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_79C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:108:6.9:0,6.9,283.8:7:0:7.251:12.08
1	53954398	13030:1	T	T[4:116923084[	0	PASS	EVDNC=ASSMB;HOMSEQ=TATTTCAT;MAPQ=60;MATEID=13030:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:98:4.2:0,4.2,254.1:7:0:4.44:12.39
1	53954555	13050:1	T	T]2:198602574]	16	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=13050:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_99C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:94:16.7:16.7,0,218:11:5:-16.49:26.94
1	53954591	23420:1	T	[1:101901145[T	27	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=23420:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_101895501_101920501_8C;SPAN=47946554;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:8:3:-27.73:27.73
1	53954647	355239:1	T	[6:94103373[T	49	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AATA;MAPQ=60;MATEID=355239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94080001_94105001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:10:12:-49.51:49.51
1	53954656	13059:1	T	]9:29653849]T	7	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=13059:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_206C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:90:7.7:7.7,0,218.9:10:0:-7.712:19.71
1	53954687	283944:1	T	]5:28235202]T	38	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=283944:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28224001_28249001_78C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:9:10:-38.69:38.69
1	53954735	13066:1	C	]X:141414291]C	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=60;MATEID=13066:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:94:0.2:0.2,0,234.5:6:4:0.01462:14.79
1	53954830	13069:1	G	G[7:71849933[	3	PASS	EVDNC=ASSMB;INSERTION=ACAGTACTACAATGAACACTCTTA;MAPQ=60;MATEID=13069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:93:3.8:3.8,0,228.2:9:0:-3.568:17.17
1	53954930	23510:1	T	]1:102149200]T	39	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=23510:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_102140501_102165501_11C;SPAN=48194270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
1	53955314	13082:1	T	T[14:54941811[	28	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=13082:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53955314(+)-14:54941811(-)__1_53949001_53974001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
1	55240234	998154:1	G	G]Un_JTFH01000519v1_decoy:1533]	95	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=998154:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1362_1_1533_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:9:8.7:95.7,8.7,0:32:0:-95.72:95.72
1	56216061	12975:2	T	T[1:53952867[	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=12975:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_65C;SPAN=2263194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:39:45.2:45.2,0,51.8:9:14:-45.15:45.19
1	56365452	13595:1	C	C[1:56369290[	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGAACCACTGCCTC;MAPQ=60;MATEID=13595:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_1_56350001_56375001_21C;SPAN=3838;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22
1	56369290	13595:2	A	]1:56365452]A	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGAACCACTGCCTC;MAPQ=60;MATEID=13595:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_1_56350001_56375001_21C;SPAN=3838;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22
1	56530361	13644:1	C	]1:56530674]C	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=13644:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_56521501_56546501_16C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:39:35.3:35.3,0,61.7:14:3:-35.25:35.68
1	56530674	13644:2	T	T[1:56530361[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=13644:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_56521501_56546501_16C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:39:35.3:35.3,0,61.7:14:3:-35.25:35.68
1	58630799	14040:2	C	]1:33010843]C	28	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=14040:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:33010843(+)-1:58630799(-)__1_58628501_58653501D;SPAN=25619956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81
1	58631258	78199:1	T	T[2:31823482[	52	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=78199:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:58631258(+)-2:31823482(-)__2_31801001_31826001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:15:4.8:52.8,4.8,0:0:18:-52.81:52.81
1	59491056	439496:1	T	[8:6678940[T	42	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA;MAPQ=45;MATEID=439496:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_6664001_6689001_35C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91
1	60822424	14479:1	A	]1:60822666]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=14479:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_60809001_60834001_4C;SPAN=242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:58:46.4:99.2,0,46.4:35:0:-100.3:100.3
1	60822666	14479:2	A	A[1:60822424[	99	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=14479:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_60809001_60834001_4C;SPAN=242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:58:46.4:99.2,0,46.4:35:0:-100.3:100.3
1	63956963	16730:1	C	C]1:70234741]	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=16730:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:63956963(+)-1:70234741(+)__1_70217001_70242001D;SPAN=6277778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:0:10:-29.91:29.91
1	64373280	15448:1	T	T]1:64389687]	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=15448:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:64373280(+)-1:64389687(+)__1_64386001_64411001D;SPAN=16407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
1	64389687	15448:2	T	T]1:64373280]	23	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=15448:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:64373280(+)-1:64389687(+)__1_64386001_64411001D;SPAN=16407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
1	65345199	17796:1	T	]1:74835106]T	56	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=17796:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:65345199(-)-1:74835106(+)__1_74823001_74848001D;SPAN=9489907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
1	70234741	16730:2	C	C]1:63956963]	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=16730:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:63956963(+)-1:70234741(+)__1_70217001_70242001D;SPAN=6277778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:0:10:-29.91:29.91
1	72339814	989548:1	C	C]Un_KN707820v1_decoy:8307]	62	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=989548:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_671_1_8307_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:6:5.7:62.7,5.7,0:21:0:-62.72:62.72
1	73903568	81804:1	T	]2:40869772]T	18	PASS	EVDNC=ASSMB;INSERTION=GAT;MAPQ=60;MATEID=81804:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40866001_40891001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
1	74835106	17796:2	C	C[1:65345199[	56	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=17796:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:65345199(-)-1:74835106(+)__1_74823001_74848001D;SPAN=9489907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
1	79184460	18692:1	A	]1:79184589]A	51	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=18692:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_79184001_79209001_0C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
1	79184589	18692:2	A	A[1:79184460[	51	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=18692:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_79184001_79209001_0C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
1	79756214	18804:1	G	G[1:79757394[	42	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=18804:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:79756214(+)-1:79757394(-)__1_79747501_79772501D;SPAN=1180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
1	79757394	18804:2	C	]1:79756214]C	42	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=18804:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:79756214(+)-1:79757394(-)__1_79747501_79772501D;SPAN=1180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
1	81194666	19073:1	T	T]1:81195873]	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=60;MATEID=19073:2;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_1_81193001_81218001_6C;SPAN=1207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:19:4:-69.32:69.32
1	81194672	19074:1	C	[1:81195686[C	24	PASS	EVDNC=ASSMB;INSERTION=ATTTTAAATTATTAAAAAA;MAPQ=60;MATEID=19074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_81193001_81218001_0C;SPAN=1014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
1	81195686	19074:2	T	[1:81194672[T	24	PASS	EVDNC=ASSMB;INSERTION=ATTTTAAATTATTAAAAAA;MAPQ=60;MATEID=19074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_81193001_81218001_0C;SPAN=1014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
1	81195873	19073:2	A	A]1:81194666]	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=60;MATEID=19073:1;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_1_81193001_81218001_6C;SPAN=1207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:19:4:-69.32:69.32
1	82660293	19398:1	C	C[1:82661887[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATGGTTCATGC;MAPQ=60;MATEID=19398:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_1_82638501_82663501_1C;SPAN=1594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:10:9:-42.91:42.91
1	82661887	19398:2	A	]1:82660293]A	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATGGTTCATGC;MAPQ=60;MATEID=19398:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_1_82638501_82663501_1C;SPAN=1594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:10:9:-42.91:42.91
1	83390671	407388:1	A	]7:76846695]A	16	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=407388:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390671(-)-7:76846695(+)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51
1	83390908	407389:1	T	T[7:76847406[	47	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=407389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390908(+)-7:76847406(-)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:0:17:-47.25:47.25
1	83426016	407403:1	G	]7:76882570]G	25	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=407403:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83426016(-)-7:76882570(+)__7_76881001_76906001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
1	83590531	19632:1	T	]1:83591652]T	69	PASS	EVDNC=ASSMB;INSERTION=TATCAA;MAPQ=60;MATEID=19632:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_83569501_83594501_12C;SPAN=1121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56
1	83591652	19632:2	T	T[1:83590531[	69	PASS	EVDNC=ASSMB;INSERTION=TATCAA;MAPQ=60;MATEID=19632:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_83569501_83594501_12C;SPAN=1121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56
1	84052256	19733:1	T	T[1:84058947[	48	PASS	EVDNC=ASSMB;HOMSEQ=TGATTTGTTTTTCT;MAPQ=60;MATEID=19733:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_84035001_84060001_6C;SPAN=6691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46
1	84058947	19733:2	T	]1:84052256]T	48	PASS	EVDNC=ASSMB;HOMSEQ=TGATTTGTTTTTCT;MAPQ=60;MATEID=19733:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_84035001_84060001_6C;SPAN=6691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46
1	86662852	20268:1	C	]1:86673324]C	27	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=20268:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86662852(-)-1:86673324(+)__1_86656501_86681501D;SPAN=10472;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
1	86663300	20269:1	C	C[1:86673647[	22	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=20269:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86663300(+)-1:86673647(-)__1_86656501_86681501D;SPAN=10347;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
1	86664107	20270:1	A	[1:86665916[A	20	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=20270:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86664107(-)-1:86665916(-)__1_86656501_86681501D;SPAN=1809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
1	86665916	20270:2	A	[1:86664107[A	20	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=20270:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86664107(-)-1:86665916(-)__1_86656501_86681501D;SPAN=1809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
1	86673324	20268:2	C	C[1:86662852[	27	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=20268:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86662852(-)-1:86673324(+)__1_86656501_86681501D;SPAN=10472;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
1	86673647	20269:2	G	]1:86663300]G	22	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=20269:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86663300(+)-1:86673647(-)__1_86656501_86681501D;SPAN=10347;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
1	88297535	20596:1	A	]1:88386949]A	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=20596:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:88297535(-)-1:88386949(+)__1_88371501_88396501D;SPAN=89414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
1	88386949	20596:2	G	G[1:88297535[	25	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=20596:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:88297535(-)-1:88386949(+)__1_88371501_88396501D;SPAN=89414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
1	88507126	802912:1	T	[17:33736830[T	49	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=802912:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:88507126(-)-17:33736830(-)__17_33736501_33761501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51
1	88507142	802914:1	T	T]17:33737644]	52	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=802914:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_33736501_33761501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81
1	94841278	21975:1	T	]1:95183553]T	33	PASS	EVDNC=ASSMB;INSERTION=CTTAAACATTTAACATAAAG;MAPQ=60;MATEID=21975:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_95182501_95207501_1C;SPAN=342275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:11:0:-33.01:33.01
1	95183553	21975:2	A	A[1:94841278[	33	PASS	EVDNC=ASSMB;INSERTION=CTTAAACATTTAACATAAAG;MAPQ=60;MATEID=21975:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_95182501_95207501_1C;SPAN=342275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:11:0:-33.01:33.01
1	101895084	23464:1	A	]1:102015776]A	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=23464:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_101993501_102018501_8C;SPAN=120692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:9:8:-33.83:33.83
1	101901145	23420:2	G	[1:53954591[G	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=23420:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_101895501_101920501_8C;SPAN=47946554;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:8:3:-27.73:27.73
1	102015776	23464:2	T	T[1:101895084[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=23464:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_101993501_102018501_8C;SPAN=120692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:9:8:-33.83:33.83
1	102149200	23510:2	T	T[1:53954930[	39	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=23510:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_102140501_102165501_11C;SPAN=48194270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
1	103230510	219488:1	A	]4:19519813]A	75	PASS	DISC_MAPQ=0;EVDNC=TSI_G;HOMSEQ=ATACATACATATATATGTACATACATACATATATA;INSERTION=TATACGTACATACATACATATATACATACATATATACGTACATACATATATATGTACATACATACATACGTACATACATATATATGTACATACATACATATGTACATACATATATATGTACATACATACATAT;MAPQ=55;MATEID=219488:2;MATENM=4;NM=4;NUMPARTS=5;SCTG=c_4_19502001_19527001_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:5:6.9:75.9,6.9,0:24:5:-75.92:75.92
1	105473276	24459:1	T	T[1:105480775[	79	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=24459:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:105473276(+)-1:105480775(-)__1_105472501_105497501D;SPAN=7499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:4:7.2:79.2,7.2,0:0:26:-79.22:79.22
1	105480775	24459:2	G	]1:105473276]G	79	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=24459:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:105473276(+)-1:105480775(-)__1_105472501_105497501D;SPAN=7499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:4:7.2:79.2,7.2,0:0:26:-79.22:79.22
1	105943242	24579:1	A	]1:105943358]A	28	PASS	EVDNC=ASSMB;INSERTION=TCCTGTTGTGT;MAPQ=60;MATEID=24579:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_105938001_105963001_4C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
1	105943358	24579:2	G	G[1:105943242[	28	PASS	EVDNC=ASSMB;INSERTION=TCCTGTTGTGT;MAPQ=60;MATEID=24579:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_105938001_105963001_4C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
1	106192958	165185:1	A	]3:63948014]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=165185:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63945001_63970001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:53:14.7:161.7,14.7,0:49:0:-160.5:160.5
1	106260694	24645:1	T	T[17:60756794[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=24645:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106256501_106281501_135C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:87:1.2:0,1.2,221.1:5:2:1.348:12.76
1	106530936	24780:1	A	]20:47506404]A	41	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=24780:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106526001_106551001_55C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:89:41:41,0,182.9:20:0:-41:46.11
1	106630185	883008:1	C	]20:48074953]C	10	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=883008:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48069001_48094001_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:153:10:10,0,373.1:13:6:-9.809:31.08
1	106886633	25624:1	C	C[1:108105777[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=25624:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_64C;SPAN=1219144;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:38:72:75.5:105.2,0,75.5:38:0:-105.4:105.4
1	106943617	602819:1	G	[11:96004715[G	66	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=602819:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_95991001_96016001_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:12:6:66,6,0:18:14:-66.02:66.02
1	106982020	25023:1	G	[17:61814571[G	37	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=25023:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106967001_106992001_105C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:68:37.1:37.1,0,132.8:15:5:-37:40.1
1	107060056	26772:1	T	]1:111868101]T	27	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=26772:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_111867001_111892001_5C;SPAN=4808045;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:92:27.2:27.2,0,202.1:16:0:-26.96:34.89
1	107091117	25102:1	A	[20:47170985[A	43	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=25102:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107089501_107114501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:106:43.1:43.1,0,221.3:12:17:-42.83:49.86
1	107200026	27877:1	G	]1:114620454]G	0	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=27877:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_114611001_114636001_127C;SPAN=7420428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:175:2.8:0,2.8,445.6:14:0:2.977:25.49
1	107258745	25214:1	C	C]7:43049975]	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CACCACTGGGGCCCACCACTGT;MAPQ=60;MATEID=25214:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_107236501_107261501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:145:0.9:0,0.9,366.3:10:3:1.146:22.03
1	107264508	25218:1	A	A[20:47787044[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CATGACAGGACAGGAGGCTGGGGGGAA;MAPQ=60;MATEID=25218:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_107261001_107286001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:143:23.5:0,23.5,405.9:2:3:23.69:7.268
1	107571647	884509:1	G	[20:51129425[G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=884509:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51107001_51132001_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:38:10.5:115.5,10.5,0:22:32:-114.4:114.4
1	107577023	885591:1	A	A[20:53413597[	69	PASS	EVDNC=ASSMB;INSERTION=GTAAATA;MAPQ=60;MATEID=885591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_53410001_53435001_13C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
1	107584696	27430:1	C	[1:113807900[C	58	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=27430:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113802501_113827501_116C;SPAN=6223204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:75:58.1:58.1,0,130.7:7:17:-58.14:59.68
1	107860352	25484:1	T	T[1:107862863[	50	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=25484:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107849001_107874001_69C;SPAN=2511;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:69:50:50,0,122.6:21:0:-49.93:51.66
1	107862863	25484:2	A	]1:107860352]A	50	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=25484:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107849001_107874001_69C;SPAN=2511;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:69:50:50,0,122.6:21:0:-49.93:51.66
1	108105777	25624:2	C	]1:106886633]C	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=25624:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_64C;SPAN=1219144;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:38:72:75.5:105.2,0,75.5:38:0:-105.4:105.4
1	108106953	25634:1	C	C[20:47414043[	76	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=25634:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_99C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:46:36.8:76.4,0,36.8:27:0:-76.82:76.82
1	108824497	25945:1	T	T[1:108829337[	29	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=25945:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:108824497(+)-1:108829337(-)__1_108829001_108854001D;SPAN=4840;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
1	108829337	25945:2	T	]1:108824497]T	29	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=25945:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:108824497(+)-1:108829337(-)__1_108829001_108854001D;SPAN=4840;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
1	108952236	184409:1	T	]3:110694547]T	89	PASS	EVDNC=ASSMB;INSERTION=TTGCAG;MAPQ=60;MATEID=184409:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_110691001_110716001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:12:8.1:89.1,8.1,0:29:0:-89.12:89.12
1	109030610	25996:1	T	T[1:109032559[	43	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=25996:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_109025001_109050001_35C;SPAN=1949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8
1	109032559	25996:2	T	]1:109030610]T	43	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=25996:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_109025001_109050001_35C;SPAN=1949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8
1	109194083	508919:1	T	[9:104854285[T	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGTCTCCAGGACATTTTTGTATA;MAPQ=60;MATEID=508919:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104835501_104860501_16C;SPAN=-1;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:12:10:-45.49:45.49
1	109198402	504384:1	C	C[9:89437208[	42	PASS	EVDNC=ASSMB;INSERTION=ACCATATATATAAATGTATGGCTGGAGA;MAPQ=60;MATEID=504384:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_89425001_89450001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9
1	111822912	809881:1	T	[17:58962856[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=809881:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58947001_58972001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:50:105:99:135.5,0,128.9:34:28:-135.5:135.5
1	111868101	26772:2	G	G[1:107060056[	27	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=26772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_111867001_111892001_5C;SPAN=4808045;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:92:27.2:27.2,0,202.1:16:0:-26.96:34.89
1	112292483	26890:1	A	A[1:112295044[	92	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGGACACAAACAA;MAPQ=60;MATEID=26890:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_112283501_112308501_38C;SPAN=2561;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:16:8.4:92.4,8.4,0:30:0:-92.42:92.42
1	112295044	26890:2	A	]1:112292483]A	92	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGGACACAAACAA;MAPQ=60;MATEID=26890:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_112283501_112308501_38C;SPAN=2561;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:16:8.4:92.4,8.4,0:30:0:-92.42:92.42
1	113068804	27110:1	C	C[1:113071155[	72	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=27110:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113068804(+)-1:113071155(-)__1_113067501_113092501D;SPAN=2351;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62
1	113071155	27110:2	A	]1:113068804]A	72	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=27110:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113068804(+)-1:113071155(-)__1_113067501_113092501D;SPAN=2351;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62
1	113497297	27249:1	G	G[1:113503309[	39	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=27249:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113497297(+)-1:113503309(-)__1_113484001_113509001D;SPAN=6012;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77
1	113503309	27249:2	G	]1:113497297]G	39	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=27249:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113497297(+)-1:113503309(-)__1_113484001_113509001D;SPAN=6012;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77
1	113684515	591775:1	T	[11:59681933[T	46	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=591775:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_59682001_59707001_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:8:13:-46.21:46.21
1	113762203	27966:1	T	[1:114680592[T	36	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GTTGTAA;MAPQ=60;MATEID=27966:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_114660001_114685001_71C;SPAN=918389;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:151:36.8:36.8,0,343.7:17:13:-36.78:51.31
1	113786160	885592:1	A	[20:53431676[A	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=885592:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_53410001_53435001_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:24:12.6:138.6,12.6,0:31:26:-138.6:138.6
1	113786165	883730:1	T	T[20:49309026[	47	PASS	EVDNC=ASSMB;HOMSEQ=AGAT;MAPQ=60;MATEID=883730:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
1	113798539	27425:1	G	]3:62653401]G	15	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=27425:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113778001_113803001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
1	113801494	27426:1	T	T[3:64698562[	25	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=27426:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_113778001_113803001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06
1	113802953	27448:1	G	[1:113834992[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TGC;MAPQ=60;MATEID=27448:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113827001_113852001_40C;SPAN=32039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:79:73.7:123.2,0,73.7:23:30:-123.6:123.6
1	113807900	27430:2	T	[1:107584696[T	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=27430:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113802501_113827501_116C;SPAN=6223204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:75:58.1:58.1,0,130.7:7:17:-58.14:59.68
1	113813812	27442:1	C	[17:60735668[C	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=27442:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113802501_113827501_57C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:87:97.7:120.8,0,97.7:23:34:-120.9:120.9
1	113834992	27448:2	T	[1:113802953[T	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TGC;MAPQ=60;MATEID=27448:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113827001_113852001_40C;SPAN=32039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:79:73.7:123.2,0,73.7:23:30:-123.6:123.6
1	113905874	164554:1	T	]3:62730756]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=164554:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_62720001_62745001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:72:29.3:29.3,0,151.4:15:0:-29.28:34.02
1	114215076	164618:1	T	[3:62865047[T	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=T;INSERTION=GAATATGGAAGAACCCCCAAGAAATGTTTTGAACACAGTA;MAPQ=60;MATEID=164618:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_3_62842501_62867501_111C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:39:97:99:101.6,0,141.2:29:15:-101.5:101.9
1	114236570	164633:1	A	[3:62871544[A	96	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=164633:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_62867001_62892001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:81:96.2:96.2,0,106.1:26:15:-96.07:96.11
1	114491354	27803:1	G	]20:48030664]G	0	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=27803:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_114488501_114513501_55C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:130:13.2:0,13.2,353.1:7:0:13.44:11.51
1	114500909	27809:1	G	G[1:114501211[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTGGG;MAPQ=60;MATEID=27809:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_114488501_114513501_64C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:84:118:52.7:244.1,0,52.7:84:0:-251:251
1	114501211	27809:2	A	]1:114500909]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTGGG;MAPQ=60;MATEID=27809:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_114488501_114513501_64C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:84:118:52.7:244.1,0,52.7:84:0:-251:251
1	114616011	27881:1	C	[20:53736867[C	5	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=27881:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_114611001_114636001_102C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:145:5.6:5.6,0,358.7:9:8:-5.456:26.69
1	114620454	27877:2	G	G[1:107200026[	0	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=27877:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_114611001_114636001_127C;SPAN=7420428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:175:2.8:0,2.8,445.6:14:0:2.977:25.49
1	114680592	27966:2	G	[1:113762203[G	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTTGTAA;MAPQ=60;MATEID=27966:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_114660001_114685001_71C;SPAN=918389;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:151:36.8:36.8,0,343.7:17:13:-36.78:51.31
1	114690356	165075:1	C	C[3:63626756[	50	PASS	EVDNC=ASSMB;INSERTION=CAAAAGC;MAPQ=60;MATEID=165075:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63626501_63651501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:81:50:50,0,152.3:22:0:-49.85:52.82
1	114692386	27990:1	T	[20:48883196[T	2	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=27990:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_114684501_114709501_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:120:2.6:2.6,0,299.6:8:7:-2.58:20.71
1	114822463	881169:1	T	T[20:42447943[	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=881169:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42434001_42459001_33C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:51:41:14.1:155.1,14.1,0:51:0:-155.1:155.1
1	114957233	645044:1	T	]12:107973569]T	19	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=645044:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_107971501_107996501_49C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
1	116254645	883009:1	A	[20:48085502[A	1	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ACCT;MAPQ=60;MATEID=883009:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48069001_48094001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:147:1.6:1.6,0,368:8:9:-1.593:24.26
1	116328915	28737:1	A	]1:116588466]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=28737:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_116571001_116596001_24C;SPAN=259551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6
1	116588466	28737:2	G	G[1:116328915[	47	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=43;MATEID=28737:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_116571001_116596001_24C;SPAN=259551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6
1	118858672	115326:1	C	C]2:141095450]	42	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=115326:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:118858672(+)-2:141095450(+)__2_141071001_141096001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91
1	119016159	29566:1	T	T[1:119016468[	31	PASS	EVDNC=ASSMB;HOMSEQ=CAGTAATTCTT;MAPQ=60;MATEID=29566:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_118996501_119021501_109C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
1	119016468	29566:2	C	]1:119016159]C	31	PASS	EVDNC=ASSMB;HOMSEQ=CAGTAATTCTT;MAPQ=60;MATEID=29566:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_118996501_119021501_109C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
1	119717902	880606:1	G	[20:40861608[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=880606:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_40841501_40866501_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:52:21:14.4:158.4,14.4,0:29:38:-158.4:158.4
1	119844586	881265:1	G	]20:42679541]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881265:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_42679001_42704001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:27:11.1:122.1,11.1,0:40:0:-122.1:122.1
1	123059666	32735:1	T	T[1:123802270[	99	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=32735:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123059666(+)-1:123802270(-)__1_123798501_123823501D;SPAN=742604;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:24:9:99,9,0:0:33:-99.02:99.02
1	123283955	292697:1	G	G]5:49623939]	33	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=292697:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123283955(+)-5:49623939(+)__5_49612501_49637501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:0:11:-33.01:33.01
1	123508702	33738:1	G	]1:124397084]G	21	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=33738:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123508702(-)-1:124397084(+)__1_124386501_124411501D;SPAN=888382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
1	123802270	32735:2	G	]1:123059666]G	99	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=32735:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123059666(+)-1:123802270(-)__1_123798501_123823501D;SPAN=742604;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:24:9:99,9,0:0:33:-99.02:99.02
1	124397084	33738:2	G	G[1:123508702[	21	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=33738:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123508702(-)-1:124397084(+)__1_124386501_124411501D;SPAN=888382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
1	124801523	34161:1	G	]1:124809210]G	33	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=34161:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:124801523(-)-1:124809210(+)__1_124803001_124828001D;SPAN=7687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:1:3:33,3,0:0:11:-33.01:33.01
1	124809210	34161:2	C	C[1:124801523[	33	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=34161:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:124801523(-)-1:124809210(+)__1_124803001_124828001D;SPAN=7687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:1:3:33,3,0:0:11:-33.01:33.01
1	124977945	34306:1	N	N[1:124978327[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GCCGGAAATTGCTCCAAGCATCCACCTACATATCCTGCAAAGAAACTGTTTCTAAACAGCTCTCTCAAGAGGAAGGTGCAGCTCTGTGAGTTGAATGCACACATCACAAACAAATTCCTGAGAATGCTTCTGTCTAGTTTTTCTGTGAAGATATTTCCTTTTCCAACATAGGCTTCAAATCGCTCCAAATATCCAATTGCAGATTCTGCAAAAAGATTGTTT;MAPQ=60;MATEID=34306:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_1_124974501_124999501_30C;SPAN=382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:8:11.1:122.1,11.1,0:40:0:-122.1:122.1
1	124978327	34306:2	C	]1:124977945]C	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GCCGGAAATTGCTCCAAGCATCCACCTACATATCCTGCAAAGAAACTGTTTCTAAACAGCTCTCTCAAGAGGAAGGTGCAGCTCTGTGAGTTGAATGCACACATCACAAACAAATTCCTGAGAATGCTTCTGTCTAGTTTTTCTGTGAAGATATTTCCTTTTCCAACATAGGCTTCAAATCGCTCCAAATATCCAATTGCAGATTCTGCAAAAAGATTGTTT;MAPQ=60;MATEID=34306:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_1_124974501_124999501_30C;SPAN=382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:8:11.1:122.1,11.1,0:40:0:-122.1:122.1
1	125080586	34586:1	C	]1:125080769]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CATTCGAGTCCATT;MAPQ=60;MATEID=34586:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_1_125072501_125097501_328C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:299:57.5:0,57.5,868.1:8:0:57.64:10.7
1	125080769	34586:2	T	T[1:125080586[	0	PASS	EVDNC=ASSMB;HOMSEQ=CATTCGAGTCCATT;MAPQ=36;MATEID=34586:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_1_125072501_125097501_328C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:299:57.5:0,57.5,868.1:8:0:57.64:10.7
1	143864342	35280:1	T	T]1:207739629]	36	PASS	DISC_MAPQ=4;EVDNC=ASDIS;INSERTION=CTCC;MAPQ=17;MATEID=35280:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_143864001_143889001_6C;SPAN=63875287;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:9:6:-36.31:36.31
1	145815067	36638:1	G	]1:148070222]G	20	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=36638:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:145815067(-)-1:148070222(+)__1_148053501_148078501D;SPAN=2255155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25
1	147652890	36513:1	G	]1:147653211]G	17	PASS	DISC_MAPQ=11;EVDNC=ASDIS;HOMSEQ=GATCTCGGCTCACTGCAA;MAPQ=44;MATEID=36513:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_1_147637001_147662001_6C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:2:-17.06:20.24
1	147653211	36513:2	A	A[1:147652890[	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCTCGGCTCACTGCAA;MAPQ=60;MATEID=36513:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_1_147637001_147662001_6C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:2:-17.06:20.24
1	148070222	36638:2	T	T[1:145815067[	20	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=36638:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:145815067(-)-1:148070222(+)__1_148053501_148078501D;SPAN=2255155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25
1	150621245	295608:1	C	[5:56152290[C	26	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=295608:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:150621245(-)-5:56152290(-)__5_56129501_56154501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29
1	150718975	37741:1	T	T[1:150719294[	99	PASS	EVDNC=ASSMB;HOMSEQ=AGAATTCTCAATTAAT;MAPQ=60;MATEID=37741:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_150699501_150724501_40C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:35:14.7:161.7,14.7,0:53:0:-161.7:161.7
1	150719294	37741:2	A	]1:150718975]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AGAATTCTCAATTAAT;MAPQ=60;MATEID=37741:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_150699501_150724501_40C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:35:14.7:161.7,14.7,0:53:0:-161.7:161.7
1	151211760	38014:1	C	C[1:151212045[	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGCTTGCAGTGAGCCAAGATC;MAPQ=60;MATEID=38014:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151189501_151214501_60C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:55:2.1:0,2.1,141.9:4:0:2.256:7.112
1	151212045	38014:2	G	]1:151211760]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGCTTGCAGTGAGCCAAGATC;MAPQ=60;MATEID=38014:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151189501_151214501_60C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:55:2.1:0,2.1,141.9:4:0:2.256:7.112
1	151938858	38348:1	T	T[1:151939885[	10	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=38348:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151924501_151949501_25C;SPAN=1027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4
1	151939885	38348:2	C	]1:151938858]C	10	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=38348:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151924501_151949501_25C;SPAN=1027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4
1	151974841	38399:1	G	]1:152087871]G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38399:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:151974841(-)-1:152087871(+)__1_152071501_152096501D;SPAN=113030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09
1	152087871	38399:2	T	T[1:151974841[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38399:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:151974841(-)-1:152087871(+)__1_152071501_152096501D;SPAN=113030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09
1	152213285	38428:1	A	A[1:152214664[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGCCAGACCCATGTTGGCCGTAGCTGGAAGA;MAPQ=60;MATEID=38428:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_1_152194001_152219001_88C;SPAN=1379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:157:99:107.9,0,286.1:30:17:-107.7:112.3
1	152214664	38428:2	G	]1:152213285]G	99	PASS	DISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=GAGCCAGACCCATGTTGGCCGTAGCTGGAAGA;MAPQ=60;MATEID=38428:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_1_152194001_152219001_88C;SPAN=1379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:157:99:107.9,0,286.1:30:17:-107.7:112.3
1	152583177	38584:1	G	G[1:152615264[	99	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=38584:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:152583177(+)-1:152615264(-)__1_152610501_152635501D;SPAN=32087;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:4:9:99,9,0:0:33:-99.02:99.02
1	152615264	38584:2	T	]1:152583177]T	99	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=38584:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:152583177(+)-1:152615264(-)__1_152610501_152635501D;SPAN=32087;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:4:9:99,9,0:0:33:-99.02:99.02
1	153070710	38737:1	G	G[1:153093702[	23	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=38737:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153070710(+)-1:153093702(-)__1_153051501_153076501D;SPAN=22992;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
1	153071239	38741:1	G	]1:153094217]G	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153071239(-)-1:153094217(+)__1_153076001_153101001D;SPAN=22978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
1	153093702	38737:2	A	]1:153070710]A	23	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=38737:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153070710(+)-1:153093702(-)__1_153051501_153076501D;SPAN=22992;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
1	153094217	38741:2	G	G[1:153071239[	19	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=38741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153071239(-)-1:153094217(+)__1_153076001_153101001D;SPAN=22978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
1	153161232	38758:1	A	A[1:153161488[	99	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=38758:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_1_153149501_153174501_38C;SPAN=256;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8
1	153161488	38758:2	T	]1:153161232]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=38758:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_1_153149501_153174501_38C;SPAN=256;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8
1	154713957	39323:1	C	]1:154714620]C	44	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=39323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:154713957(-)-1:154714620(+)__1_154693001_154718001D;SPAN=663;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:40:44.9:44.9,0,54.8:0:17:-44.87:44.94
1	154714620	39323:2	T	T[1:154713957[	44	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=39323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:154713957(-)-1:154714620(+)__1_154693001_154718001D;SPAN=663;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:40:44.9:44.9,0,54.8:0:17:-44.87:44.94
1	155147370	39479:1	A	]1:155147439]A	78	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATAGATACATATTTAAATATGTAT;INSERTION=AATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATAAATATGTATCTATTTAATAGATACATATTTAAGTATCTATTT;MAPQ=60;MATEID=39479:2;MATENM=4;NM=4;NUMPARTS=4;SCTG=c_1_155134001_155159001_119C;SPAN=69;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:62:75.2:78.5,0,75.2:29:0:-78.3:78.3
1	155147439	39479:2	A	A[1:155147370[	78	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATAGATACATATTTAAATATGTAT;INSERTION=AATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATAAATATGTATCTATTTAATAGATACATATTTAAGTATCTATTT;MAPQ=60;MATEID=39479:1;MATENM=4;NM=4;NUMPARTS=4;SCTG=c_1_155134001_155159001_119C;SPAN=69;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:62:75.2:78.5,0,75.2:29:0:-78.3:78.3
1	155531284	39855:1	G	]1:156495760]G	33	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=39855:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_156481501_156506501_9C;SPAN=964476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:11:0:-33.01:33.01
1	156495760	39855:2	G	G[1:155531284[	33	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=39855:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_156481501_156506501_9C;SPAN=964476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:11:0:-33.01:33.01
1	156556931	39879:1	C	C[1:156559144[	46	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATTGAGTAGCTCAGC;MAPQ=60;MATEID=39879:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_156555001_156580001_74C;SPAN=2213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21
1	156559144	39879:2	A	]1:156556931]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATTGAGTAGCTCAGC;MAPQ=60;MATEID=39879:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_156555001_156580001_74C;SPAN=2213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21
1	157204074	40074:1	A	A[1:157205607[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTTATCAAATTT;MAPQ=60;MATEID=40074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_157192001_157217001_10C;SPAN=1533;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:6:5:-23.81:23.84
1	157205607	40074:2	A	]1:157204074]A	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTTATCAAATTT;MAPQ=60;MATEID=40074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_157192001_157217001_10C;SPAN=1533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:6:5:-23.81:23.84
1	157570871	40199:1	A	A[1:157571087[	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=40199:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_157559501_157584501_117C;SPAN=216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
1	157571087	40199:2	T	]1:157570871]T	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=40199:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_157559501_157584501_117C;SPAN=216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
1	157699943	318970:1	A	A[5:169468974[	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=318970:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_169466501_169491501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
1	158108318	46063:1	C	[1:178946978[C	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=46063:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_178923501_178948501_7C;SPAN=20838660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:19:8.7:95.7,8.7,0:17:19:-95.72:95.72
1	158441289	45917:1	A	A]1:178096153]	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=45917:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158441289(+)-1:178096153(+)__1_178090501_178115501D;SPAN=19654864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93
1	158991664	40561:1	A	A[1:158996411[	46	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=40561:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158991664(+)-1:158996411(-)__1_158980501_159005501D;SPAN=4747;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
1	158996411	40561:2	T	]1:158991664]T	46	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=40561:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158991664(+)-1:158996411(-)__1_158980501_159005501D;SPAN=4747;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
1	159050757	40583:1	T	T[1:159051098[	95	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTCCCCTCCCGCCTAATTTTTCACGTCCATGACTCTTTTTAGTTCCTGCCATTATTCAGATTGGAGAGCCTCTAACCTGGGCCCCTTCAGATTAGGAAAGTTTGTGGAGTCTTCCAGTGGCTGCCTTAATGATGTTTTTGCAACATAGTGCTGCTTCATTAGAAAGGGCTTTGCAATTTGGTTCTTTAAAATGCCCCTATCTACTAGAATGAGTTCCAACTGAAATCTCATGAAATCTAAGGTTTGTGGTTGAGACTATTCCTTACTCTGAATGCTAGTAATATGATTTTTTTCTCTATTTTTATTTTATTTGGTCACTGTCATATTAGGCAGGAGGGA;MAPQ=60;MATEID=40583:2;MATENM=6;NM=6;NUMPARTS=3;SCTG=c_1_159029501_159054501_5C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:21:8.7:95.7,8.7,0:32:0:-95.72:95.72
1	159051098	40583:2	T	]1:159050757]T	95	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTCCCCTCCCGCCTAATTTTTCACGTCCATGACTCTTTTTAGTTCCTGCCATTATTCAGATTGGAGAGCCTCTAACCTGGGCCCCTTCAGATTAGGAAAGTTTGTGGAGTCTTCCAGTGGCTGCCTTAATGATGTTTTTGCAACATAGTGCTGCTTCATTAGAAAGGGCTTTGCAATTTGGTTCTTTAAAATGCCCCTATCTACTAGAATGAGTTCCAACTGAAATCTCATGAAATCTAAGGTTTGTGGTTGAGACTATTCCTTACTCTGAATGCTAGTAATATGATTTTTTTCTCTATTTTTATTTTATTTGGTCACTGTCATATTAGGCAGGAGGGA;MAPQ=60;MATEID=40583:1;MATENM=6;NM=6;NUMPARTS=3;SCTG=c_1_159029501_159054501_5C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:21:8.7:95.7,8.7,0:32:0:-95.72:95.72
1	161481848	41076:1	G	G[1:161487634[	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=41076:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:161481848(+)-1:161487634(-)__1_161479501_161504501D;SPAN=5786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
1	161487634	41076:2	A	]1:161481848]A	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=41076:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:161481848(+)-1:161487634(-)__1_161479501_161504501D;SPAN=5786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
1	165582917	42054:1	T	T[1:165583115[	39	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TATGTGTATACATATACACATATATGT;MAPQ=60;MATEID=42054:2;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=TGTG;SCTG=c_1_165571001_165596001_23C;SPAN=198;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:7:3.6:39.6,3.6,0:13:0:-39.61:39.61
1	165583115	42054:2	T	]1:165582917]T	39	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TATGTGTATACATATACACATATATGT;MAPQ=60;MATEID=42054:1;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=TGTG;SCTG=c_1_165571001_165596001_23C;SPAN=198;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:7:3.6:39.6,3.6,0:13:0:-39.61:39.61
1	166564699	42673:1	A	[1:168370833[A	49	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=42673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_168364001_168389001_45C;SPAN=1806134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:15:7:-49.51:49.51
1	167056589	42402:1	A	]1:167057025]A	44	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=42402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:167056589(-)-1:167057025(+)__1_167041001_167066001D;SPAN=436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:41:44.6:44.6,0,57.8:0:17:-44.59:44.7
1	167057025	42402:2	G	G[1:167056589[	44	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=42402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:167056589(-)-1:167057025(+)__1_167041001_167066001D;SPAN=436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:41:44.6:44.6,0,57.8:0:17:-44.59:44.7
1	167120498	861891:1	A	A[20:6681439[	62	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=861891:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_6664001_6689001_24C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
1	168370833	42673:2	T	[1:166564699[T	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=42673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_168364001_168389001_45C;SPAN=1806134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:15:7:-49.51:49.51
1	168543261	42725:1	C	[1:168578878[C	21	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=42725:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543261(-)-1:168578878(-)__1_168560001_168585001D;SPAN=35617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36
1	168543770	42721:1	T	[1:168576851[T	22	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=42721:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543770(-)-1:168576851(-)__1_168535501_168560501D;SPAN=33081;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
1	168576851	42721:2	C	[1:168543770[C	22	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=42721:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543770(-)-1:168576851(-)__1_168535501_168560501D;SPAN=33081;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
1	168578878	42725:2	C	[1:168543261[C	21	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=42725:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543261(-)-1:168578878(-)__1_168560001_168585001D;SPAN=35617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36
1	169035123	42878:1	G	G[1:169035992[	47	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=42878:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_169025501_169050501_100C;SPAN=869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
1	169035992	42878:2	T	]1:169035123]T	47	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=42878:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_169025501_169050501_100C;SPAN=869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
1	169190799	42950:1	T	T[1:169191112[	32	PASS	EVDNC=ASSMB;HOMSEQ=GCAAGTGAACTGTTTCT;MAPQ=60;MATEID=42950:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_169172501_169197501_174C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
1	169191112	42950:2	G	]1:169190799]G	32	PASS	EVDNC=ASSMB;HOMSEQ=GCAAGTGAACTGTTTCT;MAPQ=60;MATEID=42950:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_169172501_169197501_174C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
1	169993658	43328:1	T	]1:169993838]T	74	PASS	EVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCCAGAT;MAPQ=60;MATEID=43328:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_169981001_170006001_70C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:41:28.1:74.3,0,28.1:26:0:-75.39:75.39
1	169993838	43328:2	T	T[1:169993658[	74	PASS	EVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCCAGAT;MAPQ=60;MATEID=43328:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_169981001_170006001_70C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:41:28.1:74.3,0,28.1:26:0:-75.39:75.39
1	171021024	43754:1	A	]1:171030867]A	21	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=43754:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:171021024(-)-1:171030867(+)__1_171010001_171035001D;SPAN=9843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:40:21.8:21.8,0,77.9:0:10:-21.77:23.59
1	171030867	43754:2	A	A[1:171021024[	21	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=43754:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:171021024(-)-1:171030867(+)__1_171010001_171035001D;SPAN=9843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:40:21.8:21.8,0,77.9:0:10:-21.77:23.59
1	171547927	43910:1	A	A[1:171548217[	3	PASS	EVDNC=ASSMB;HOMSEQ=CCTTGGCCTCCCAAAGTGCTGGGATTA;MAPQ=60;MATEID=43910:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_171524501_171549501_63C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753
1	171548217	43910:2	C	]1:171547927]C	3	PASS	EVDNC=ASSMB;HOMSEQ=CCTTGGCCTCCCAAAGTGCTGGGATTA;MAPQ=60;MATEID=43910:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_171524501_171549501_63C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753
1	173886819	44589:1	A	]1:173897273]A	59	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=44589:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_173876501_173901501_80C;SPAN=10454;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:47:56.3:59.6,0,56.3:22:0:-59.41:59.41
1	173897273	44589:2	G	G[1:173886819[	59	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=44589:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_173876501_173901501_80C;SPAN=10454;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:47:56.3:59.6,0,56.3:22:0:-59.41:59.41
1	174178577	44791:1	G	]1:174384561]G	18	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=44791:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_174366501_174391501_27C;SPAN=205984;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42
1	174319638	44748:1	A	]1:174320886]A	4	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=44748:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_174317501_174342501_30C;SPAN=1248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:55:4.4:4.4,0,133.1:3:6:-4.346:11.77
1	174320886	44748:2	G	G[1:174319638[	4	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=44748:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_174317501_174342501_30C;SPAN=1248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:55:4.4:4.4,0,133.1:3:6:-4.346:11.77
1	174384561	44791:2	A	A[1:174178577[	18	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=44791:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_174366501_174391501_27C;SPAN=205984;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42
1	174937737	999349:1	C	[Un_JTFH01000855v1_decoy:1[C	85	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGCCTGGG;INSERTION=AAAATTAGCTGGGTCTGGTGGCACATG;MAPQ=60;MATEID=999349:2;MATENM=1;NM=1;NUMPARTS=9;SCTG=c_1698_1_1088_0C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:9:7.8:85.8,7.8,0:28:0:-85.82:85.82
1	175231392	45123:1	T	T]1:175232880]	20	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=45123:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:175231392(+)-1:175232880(+)__1_175224001_175249001D;SPAN=1488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:43:20.9:20.9,0,86.9:0:10:-20.92:23.23
1	175232880	45123:2	G	G]1:175231392]	20	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=45123:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:175231392(+)-1:175232880(+)__1_175224001_175249001D;SPAN=1488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:43:20.9:20.9,0,86.9:0:10:-20.92:23.23
1	178095595	45920:1	A	]1:178102057]A	34	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=45920:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_178090501_178115501_73C;SPAN=6462;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3
1	178096153	45917:2	T	T]1:158441289]	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=45917:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158441289(+)-1:178096153(+)__1_178090501_178115501D;SPAN=19654864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93
1	178102057	45920:2	G	G[1:178095595[	34	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=45920:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_178090501_178115501_73C;SPAN=6462;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3
1	178946978	46063:2	T	[1:158108318[T	95	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=46063:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_178923501_178948501_7C;SPAN=20838660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:19:8.7:95.7,8.7,0:17:19:-95.72:95.72
1	179261094	46195:1	C	]1:179301500]C	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTTGGGCACA;MAPQ=60;MATEID=46195:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179291001_179316001_27C;SPAN=40406;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:20:14.3:14.3,0,34.1:3:4:-14.18:14.72
1	179301500	46195:2	G	G[1:179261094[	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTTGGGCACA;MAPQ=60;MATEID=46195:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179291001_179316001_27C;SPAN=40406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:20:14.3:14.3,0,34.1:3:4:-14.18:14.72
1	179638146	46431:1	A	A[1:179638925[	41	PASS	EVDNC=ASSMB;INSERTION=TCGTGGGTAAA;MAPQ=60;MATEID=46431:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179634001_179659001_25C;SPAN=779;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
1	179638925	46431:2	T	]1:179638146]T	41	PASS	EVDNC=ASSMB;INSERTION=TCGTGGGTAAA;MAPQ=60;MATEID=46431:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179634001_179659001_25C;SPAN=779;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
1	181698030	47398:1	G	G[1:182409037[	75	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=47398:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182402501_182427501_9C;SPAN=711007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92
1	182409037	47398:2	G	]1:181698030]G	75	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=47398:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182402501_182427501_9C;SPAN=711007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92
1	182451352	47412:1	G	]1:182451475]G	41	PASS	EVDNC=ASSMB;HOMSEQ=GAG;MAPQ=60;MATEID=47412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182427001_182452001_78C;SPAN=123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:54:41:41,0,93.8:17:0:-40.94:42.13
1	182451475	47412:2	G	G[1:182451352[	41	PASS	EVDNC=ASSMB;HOMSEQ=GAG;MAPQ=60;MATEID=47412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182427001_182452001_78C;SPAN=123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:54:41:41,0,93.8:17:0:-40.94:42.13
1	184309605	47956:1	G	G[1:184309908[	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGAAACTCTGATG;MAPQ=60;MATEID=47956:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_184289001_184314001_97C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:22:7.5:82.5,7.5,0:22:6:-82.52:82.52
1	184309908	47956:2	A	]1:184309605]A	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGAAACTCTGATG;MAPQ=60;MATEID=47956:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_184289001_184314001_97C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:22:7.5:82.5,7.5,0:22:6:-82.52:82.52
1	184845698	48124:1	T	T[1:184851643[	85	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=48124:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:184845698(+)-1:184851643(-)__1_184828001_184853001D;SPAN=5945;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:0:28:-85.82:85.82
1	184851643	48124:2	T	]1:184845698]T	85	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=48124:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:184845698(+)-1:184851643(-)__1_184828001_184853001D;SPAN=5945;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:0:28:-85.82:85.82
1	185403974	48241:1	C	C[1:185404303[	79	PASS	EVDNC=ASSMB;HOMSEQ=CCCAAGATTC;MAPQ=60;MATEID=48241:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_1_185391501_185416501_69C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22
1	185404303	48241:2	C	]1:185403974]C	79	PASS	EVDNC=ASSMB;HOMSEQ=CCCAAGATTC;MAPQ=60;MATEID=48241:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_1_185391501_185416501_69C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22
1	187495696	48778:1	T	T[1:187497598[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CCT;INSERTION=AATATGCTTTCTGTTTTTGGGTGTCACTCTCAATTTTTTTGAAACAATACATTTTTCCGTCTTACTTTAATTCATCCCTTGTCATCCATTTCTCATCCATTACATTCTAGCATTCATATCTATCCCTTCCCCACTGAAATCGATCTCACTAAGTCACTGATGTTCCCAAGTTTTTAACACAAGTTTCTGTCTTTGGTTTTCAGCCTAATTTTTTAGATATTACTACCAATAGAATGGTCTCCTGGATTT;MAPQ=60;MATEID=48778:2;MATENM=0;NM=3;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=1902;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:75:28:21:231,21,0:75:0:-231.1:231.1
1	187495696	48777:1	T	T]1:187497595]	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=48777:2;MATENM=0;NM=3;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_1_187474001_187499001_33C;SPAN=1899;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:57:29:15.9:174.9,15.9,0:48:16:-174.9:174.9
1	187497344	48780:1	A	[1:187497598[A	95	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CCT;MAPQ=60;MATEID=48780:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:26:8.7:95.7,8.7,0:32:0:-95.72:95.72
1	187497595	48777:2	T	T]1:187495696]	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=48777:1;MATENM=3;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_1_187474001_187499001_33C;SPAN=1899;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:57:29:15.9:174.9,15.9,0:48:16:-174.9:174.9
1	187497598	48780:2	C	[1:187497344[C	95	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CCT;MAPQ=60;MATEID=48780:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:26:8.7:95.7,8.7,0:32:0:-95.72:95.72
1	187497598	48778:2	C	]1:187495696]C	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CCT;INSERTION=AATATGCTTTCTGTTTTTGGGTGTCACTCTCAATTTTTTTGAAACAATACATTTTTCCGTCTTACTTTAATTCATCCCTTGTCATCCATTTCTCATCCATTACATTCTAGCATTCATATCTATCCCTTCCCCACTGAAATCGATCTCACTAAGTCACTGATGTTCCCAAGTTTTTAACACAAGTTTCTGTCTTTGGTTTTCAGCCTAATTTTTTAGATATTACTACCAATAGAATGGTCTCCTGGATTT;MAPQ=60;MATEID=48778:1;MATENM=3;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=1902;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:75:28:21:231,21,0:75:0:-231.1:231.1
1	187746975	48909:1	A	A[1:187753402[	59	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=48909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_187743501_187768501_130C;SPAN=6427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07
1	187753402	48909:2	G	]1:187746975]G	59	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=48909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_187743501_187768501_130C;SPAN=6427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07
1	188015229	49018:1	C	]1:188029002]C	33	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=49018:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:188015229(-)-1:188029002(+)__1_188013001_188038001D;SPAN=13773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:47:33.2:33.2,0,82.7:0:14:-33:34.28
1	188029002	49018:2	A	A[1:188015229[	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=49018:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:188015229(-)-1:188029002(+)__1_188013001_188038001D;SPAN=13773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:47:33.2:33.2,0,82.7:0:14:-33:34.28
1	188086594	805051:1	G	[17:44048921[G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGC;MAPQ=60;MATEID=805051:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44026501_44051501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:13:9:-49.51:49.51
1	188238750	49140:1	T	T[1:188238972[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATATAAAATATATATATATAAA;MAPQ=60;MATEID=49140:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_188233501_188258501_22C;SPAN=222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:12:9:99,9,0:29:4:-99.02:99.02
1	188238972	49140:2	A	]1:188238750]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATATAAAATATATATATATAAA;MAPQ=60;MATEID=49140:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_188233501_188258501_22C;SPAN=222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:12:9:99,9,0:29:4:-99.02:99.02
1	190868192	50402:1	T	T[1:190868361[	60	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=50402:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_190855001_190880001_71C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
1	190868361	50402:2	A	]1:190868192]A	60	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=50402:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_190855001_190880001_71C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
1	192830145	51140:1	A	A]1:193074178]	82	PASS	DISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=TTCACAATAGCAAAGACTTGGAACCA;MAPQ=43;MATEID=51140:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_192815001_192840001_40C;SPAN=244033;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:13:7.5:82.5,7.5,0:16:13:-82.52:82.52
1	193074178	51140:2	A	A]1:192830145]	82	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TTCACAATAGCAAAGACTTGGAACCA;MAPQ=31;MATEID=51140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_192815001_192840001_40C;SPAN=244033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:13:7.5:82.5,7.5,0:16:13:-82.52:82.52
1	195115153	51946:1	A	]1:195115296]A	75	PASS	EVDNC=ASSMB;INSERTION=ATAATAATAGTTTTAATGATATTTA;MAPQ=60;MATEID=51946:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_195093501_195118501_7C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88
1	195115296	51946:2	A	A[1:195115153[	75	PASS	EVDNC=ASSMB;INSERTION=ATAATAATAGTTTTAATGATATTTA;MAPQ=60;MATEID=51946:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_195093501_195118501_7C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88
1	195422180	52049:1	G	G[1:195422969[	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=52049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195412001_195437001_33C;SPAN=789;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
1	195422969	52049:2	G	]1:195422180]G	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=52049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195412001_195437001_33C;SPAN=789;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
1	195605433	52131:1	A	]1:195640364]A	25	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=52131:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195632501_195657501_26C;SPAN=34931;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
1	195640364	52131:2	A	A[1:195605433[	25	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=52131:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195632501_195657501_26C;SPAN=34931;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
1	196626791	52438:1	T	T[1:196627468[	26	PASS	EVDNC=ASSMB;INSERTION=TAAAATAGTAATTTAAAATAGTAATTTAAAATAGTAATTC;MAPQ=60;MATEID=52438:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_196612501_196637501_5C;SPAN=677;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
1	196627468	52438:2	A	]1:196626791]A	26	PASS	EVDNC=ASSMB;INSERTION=TAAAATAGTAATTTAAAATAGTAATTTAAAATAGTAATTC;MAPQ=60;MATEID=52438:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_196612501_196637501_5C;SPAN=677;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
1	196766665	52471:1	T	]1:196775958]T	31	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=52471:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:196766665(-)-1:196775958(+)__1_196759501_196784501D;SPAN=9293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31
1	196775958	52471:2	A	A[1:196766665[	31	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=52471:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:196766665(-)-1:196775958(+)__1_196759501_196784501D;SPAN=9293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31
1	197531390	52816:1	T	T[1:197534142[	58	PASS	EVDNC=ASSMB;HOMSEQ=AACAAATCTTTT;MAPQ=60;MATEID=52816:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_197519001_197544001_32C;SPAN=2752;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:87:58.1:58.1,0,160.4:25:0:-58.07:60.75
1	197534142	52816:2	A	]1:197531390]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AACAAATCTTTT;MAPQ=60;MATEID=52816:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_197519001_197544001_32C;SPAN=2752;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:87:58.1:58.1,0,160.4:25:0:-58.07:60.75
1	197544937	52839:1	A	[10:21717820[A	49	PASS	DISC_MAPQ=55;EVDNC=TSI_L;INSERTION=CCCTTCTCC;MAPQ=60;MATEID=52839:2;MATENM=0;NM=14;NUMPARTS=3;REPSEQ=CC;SCTG=c_1_197543501_197568501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:8:4.5:49.5,4.5,0:15:9:-49.51:49.51
1	197787659	52920:1	T	[1:197788855[T	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=52920:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_197788501_197813501_146C;SPAN=1196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:13:8.4:92.4,8.4,0:21:13:-92.42:92.42
1	197788855	52920:2	C	[1:197787659[C	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=52920:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_197788501_197813501_146C;SPAN=1196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:13:8.4:92.4,8.4,0:21:13:-92.42:92.42
1	198394972	53112:1	C	[1:198396527[C	27	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=46;MATEID=53112:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_198376501_198401501_35C;SPAN=1555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:33:27.2:27.2,0,53.6:6:8:-27.04:27.59
1	198396527	53112:2	T	[1:198394972[T	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=53112:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_198376501_198401501_35C;SPAN=1555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:33:27.2:27.2,0,53.6:6:8:-27.04:27.59
1	198411139	887423:1	T	T[20:58411089[	7	PASS	EVDNC=ASSMB;INSERTION=AAGAAAC;MAPQ=60;MATEID=887423:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58408001_58433001_70C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:68:7.4:7.4,0,162.5:8:0:-7.294:15.98
1	199469615	53457:1	A	A[1:199471106[	80	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATATTGGGTCTCA;MAPQ=60;MATEID=53457:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_199454501_199479501_28C;SPAN=1491;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76
1	199471106	53457:2	A	]1:199469615]A	80	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATATTGGGTCTCA;MAPQ=60;MATEID=53457:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_199454501_199479501_28C;SPAN=1491;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76
1	201509820	54322:1	T	]1:201560289]T	51	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=54322:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_201537001_201562001_61C;SPAN=50469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:10:14:-52.37:52.37
1	201560289	54322:2	T	T[1:201509820[	51	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=54322:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_201537001_201562001_61C;SPAN=50469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:10:14:-52.37:52.37
1	201763560	54467:1	G	G[1:202017203[	40	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=54467:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_202002501_202027501_0C;SPAN=253643;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65
1	201949360	69640:1	T	[2:5997703[T	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=69640:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_5978001_6003001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:8:5:-31.6:31.6
1	202017203	54467:2	T	]1:201763560]T	40	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=54467:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_202002501_202027501_0C;SPAN=253643;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65
1	202207989	69642:1	A	A]2:5987300]	26	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=69642:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:202207989(+)-2:5987300(+)__2_5978001_6003001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
1	202625106	723413:1	G	G[15:30173126[	31	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTGTGG;INSERTION=TGTTGTGTGTGGCCTGTAATAGG;MAPQ=60;MATEID=723413:2;MATENM=0;NM=1;NUMPARTS=3;REPSEQ=GTGTGTGT;SCTG=c_15_30159501_30184501_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:33:11:31,0,11:10:10:-31.29:31.29
1	203095218	54940:1	A	A[1:203096063[	41	PASS	EVDNC=ASSMB;INSERTION=TCCTATCTGTTT;MAPQ=60;MATEID=54940:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_203080501_203105501_70C;SPAN=845;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
1	203096063	54940:2	T	]1:203095218]T	41	PASS	EVDNC=ASSMB;INSERTION=TCCTATCTGTTT;MAPQ=60;MATEID=54940:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_203080501_203105501_70C;SPAN=845;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
1	203715212	55121:1	T	T[1:203717071[	56	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=55121:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:203715212(+)-1:203717071(-)__1_203693001_203718001D;SPAN=1859;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:24:3.2:56,0,3.2:0:19:-58.57:58.57
1	203717071	55121:2	G	]1:203715212]G	56	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=55121:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:203715212(+)-1:203717071(-)__1_203693001_203718001D;SPAN=1859;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:24:3.2:56,0,3.2:0:19:-58.57:58.57
1	205966752	55983:1	C	C[1:205967055[	53	PASS	EVDNC=ASSMB;HOMSEQ=AAGATAAAGGAGGC;MAPQ=60;MATEID=55983:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_205947001_205972001_100C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:33:27.2:53.6,0,27.2:19:0:-53.81:53.81
1	205967055	55983:2	A	]1:205966752]A	53	PASS	EVDNC=ASSMB;HOMSEQ=AAGATAAAGGAGGC;MAPQ=60;MATEID=55983:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_205947001_205972001_100C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:33:27.2:53.6,0,27.2:19:0:-53.81:53.81
1	206923997	56211:1	G	]1:206924644]G	60	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=56211:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:206923997(-)-1:206924644(+)__1_206902501_206927501D;SPAN=647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:43:47.3:60.5,0,47.3:0:22:-60.61:60.61
1	206924644	56211:2	T	T[1:206923997[	60	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=56211:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:206923997(-)-1:206924644(+)__1_206902501_206927501D;SPAN=647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:43:47.3:60.5,0,47.3:0:22:-60.61:60.61
1	207119002	56272:1	A	[1:207119851[A	48	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=AACAC;MAPQ=60;MATEID=56272:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=ACAC;SCTG=c_1_207098501_207123501_11C;SPAN=849;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:15:6:-48.46:48.46
1	207119017	56274:1	G	G[1:207119851[	62	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GAATTCATTCCAGTTTACAATGGTGGGCTTTACTCGCTCATCTTTGCAGGTTCCACGTTTGTCCTTGAAGCACTCAGTTCATGTCTATCTAACAC;MAPQ=60;MATEID=56274:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_1_207098501_207123501_11C;SPAN=834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:38:32.3:62,0,32.3:22:0:-62.39:62.39
1	207119851	56272:2	G	[1:207119002[G	48	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=AACAC;MAPQ=60;MATEID=56272:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=ACAC;SCTG=c_1_207098501_207123501_11C;SPAN=849;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:15:6:-48.46:48.46
1	207119851	56274:2	G	]1:207119017]G	62	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GAATTCATTCCAGTTTACAATGGTGGGCTTTACTCGCTCATCTTTGCAGGTTCCACGTTTGTCCTTGAAGCACTCAGTTCATGTCTATCTAACAC;MAPQ=60;MATEID=56274:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_1_207098501_207123501_11C;SPAN=834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:38:32.3:62,0,32.3:22:0:-62.39:62.39
1	207291869	56340:1	C	C[1:207293505[	20	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=56340:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207291869(+)-1:207293505(-)__1_207270001_207295001D;SPAN=1636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
1	207293505	56340:2	A	]1:207291869]A	20	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=56340:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207291869(+)-1:207293505(-)__1_207270001_207295001D;SPAN=1636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
1	207368688	56373:1	C	C[1:207372219[	54	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=56373:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207368688(+)-1:207372219(-)__1_207368001_207393001D;SPAN=3531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:30:21.2:54.2,0,21.2:0:19:-55.07:55.07
1	207372219	56373:2	C	]1:207368688]C	54	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=56373:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207368688(+)-1:207372219(-)__1_207368001_207393001D;SPAN=3531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:30:21.2:54.2,0,21.2:0:19:-55.07:55.07
1	207739629	35280:2	C	C]1:143864342]	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCC;MAPQ=60;MATEID=35280:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_143864001_143889001_6C;SPAN=63875287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:9:6:-36.31:36.31
1	209405199	56773:1	C	C[1:209405400[	12	PASS	EVDNC=ASSMB;HOMSEQ=TAC;MAPQ=60;MATEID=56773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_209401501_209426501_12C;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
1	209405400	56773:2	T	]1:209405199]T	12	PASS	EVDNC=ASSMB;HOMSEQ=TAC;MAPQ=60;MATEID=56773:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_209401501_209426501_12C;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
1	209904710	56838:1	A	A[1:209912633[	36	PASS	EVDNC=ASSMB;INSERTION=GAATTA;MAPQ=60;MATEID=56838:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_1_209891501_209916501_14C;SPAN=7923;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:12:0:-36.31:36.31
1	209912633	56838:2	G	]1:209904710]G	36	PASS	EVDNC=ASSMB;INSERTION=GAATTA;MAPQ=60;MATEID=56838:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_1_209891501_209916501_14C;SPAN=7923;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:12:0:-36.31:36.31
1	213160429	57479:1	T	]1:213170967]T	45	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TGCA;MAPQ=60;MATEID=57479:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_213150001_213175001_21C;SPAN=10538;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:12:12:-46.05:46.05
1	213170967	57479:2	A	A[1:213160429[	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCA;MAPQ=60;MATEID=57479:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_213150001_213175001_21C;SPAN=10538;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:12:12:-46.05:46.05
1	213512566	57547:1	T	[1:213625887[T	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=57547:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_213615501_213640501_20C;SPAN=113321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:11:6.3:69.3,6.3,0:17:9:-69.32:69.32
1	213512572	57548:1	T	T]1:213626164]	72	PASS	DISC_MAPQ=54;EVDNC=ASDIS;MAPQ=60;MATEID=57548:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_213615501_213640501_10C;SPAN=113592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:11:6.6:72.6,6.6,0:17:9:-72.62:72.62
1	213625887	57547:2	C	[1:213512566[C	69	PASS	DISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=55;MATEID=57547:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_213615501_213640501_20C;SPAN=113321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:11:6.3:69.3,6.3,0:17:9:-69.32:69.32
1	213626164	57548:2	A	A]1:213512572]	72	PASS	DISC_MAPQ=16;EVDNC=ASDIS;MAPQ=42;MATEID=57548:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_213615501_213640501_10C;SPAN=113592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:11:6.6:72.6,6.6,0:17:9:-72.62:72.62
1	214483362	57747:1	T	T]5:115842122]	28	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=57747:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:214483362(+)-5:115842122(+)__1_214473001_214498001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
1	214639551	57774:1	C	[20:57108067[C	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAG;MAPQ=60;MATEID=57774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_214620001_214645001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:21:5.7:62.7,5.7,0:14:9:-62.72:62.72
1	215441801	58040:1	A	]1:215442558]A	69	PASS	EVDNC=ASSMB;HOMSEQ=AAT;MAPQ=60;MATEID=58040:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_215428501_215453501_11C;SPAN=757;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:59:69.2:69.2,0,79.1:26:0:-69.24:69.28
1	215442558	58040:2	T	T[1:215441801[	69	PASS	EVDNC=ASSMB;HOMSEQ=AAT;MAPQ=60;MATEID=58040:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_215428501_215453501_11C;SPAN=757;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:59:69.2:69.2,0,79.1:26:0:-69.24:69.28
1	217284629	58620:1	C	C[1:217285059[	64	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=58620:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_217266001_217291001_80C;SPAN=430;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65
1	217285059	58620:2	T	]1:217284629]T	64	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=58620:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_217266001_217291001_80C;SPAN=430;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65
1	217677003	58748:1	A	]1:217682529]A	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTTATTATTTTAAATTATTAAAATATTATTATTTTAATAATTTAATATTATTAATAATAATTAATTAATATTATTAATTTAATATTATTAAAATAATATTAAAATATTATTAAAATATTATTTAAATTATTA;MAPQ=60;MATEID=58748:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217658001_217683001_8C;SPAN=5526;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:56:37.1:37.1,0,103.1:15:2:-37.08:38.84
1	217682529	58748:2	T	T[1:217677003[	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTTATTATTTTAAATTATTAAAATATTATTATTTTAATAATTTAATATTATTAATAATAATTAATTAATATTATTAATTTAATATTATTAAAATAATATTAAAATATTATTAAAATATTATTTAAATTATTA;MAPQ=60;MATEID=58748:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217658001_217683001_8C;SPAN=5526;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:56:37.1:37.1,0,103.1:15:2:-37.08:38.84
1	217744180	58785:1	C	C[1:217744483[	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATTTTC;MAPQ=60;MATEID=58785:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217731501_217756501_27C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07
1	217744483	58785:2	A	]1:217744180]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATTTTC;MAPQ=60;MATEID=58785:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217731501_217756501_27C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07
1	218009279	58916:1	A	A[1:218015252[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=58916:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:218009279(+)-1:218015252(-)__1_218001001_218026001D;SPAN=5973;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:11:9.3:102.3,9.3,0:0:34:-102.3:102.3
1	218015252	58916:2	C	]1:218009279]C	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=58916:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:218009279(+)-1:218015252(-)__1_218001001_218026001D;SPAN=5973;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:11:9.3:102.3,9.3,0:0:34:-102.3:102.3
1	218072296	58956:1	A	A[1:218073148[	56	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAGAA;MAPQ=60;MATEID=58956:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_218050001_218075001_13C;SPAN=852;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:34:26.9:56.6,0,26.9:20:0:-56.93:56.93
1	218073148	58956:2	A	]1:218072296]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAGAA;MAPQ=60;MATEID=58956:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_218050001_218075001_13C;SPAN=852;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:34:26.9:56.6,0,26.9:20:0:-56.93:56.93
1	223081189	60131:1	G	G]Un_JTFH01001976v1_decoy:2126]	52	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=60131:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_223072501_223097501_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81
1	223557417	60201:1	C	C[1:223608936[	23	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=60201:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:223557417(+)-1:223608936(-)__1_223587001_223612001D;SPAN=51519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:4:2.1:23.1,2.1,0:0:8:-23.11:23.11
1	223608936	60201:2	T	]1:223557417]T	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=60201:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:223557417(+)-1:223608936(-)__1_223587001_223612001D;SPAN=51519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:4:2.1:23.1,2.1,0:0:8:-23.11:23.11
1	224945988	60758:1	C	C[1:225060988[	46	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=60758:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:224945988(+)-1:225060988(-)__1_225057001_225082001D;SPAN=115000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21
1	225060988	60758:2	C	]1:224945988]C	46	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=60758:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:224945988(+)-1:225060988(-)__1_225057001_225082001D;SPAN=115000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21
1	225835379	400824:1	A	]7:66112826]A	23	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=400824:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:225835379(-)-7:66112826(+)__7_66101001_66126001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:36:23:23,0,65.9:0:10:-22.89:24.13
1	227836405	61932:1	C	C[1:227836705[	30	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAAGCTTCC;MAPQ=60;MATEID=61932:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_227825501_227850501_75C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
1	227836705	61932:2	A	]1:227836405]A	30	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAAGCTTCC;MAPQ=60;MATEID=61932:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_227825501_227850501_75C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
1	227927495	62260:1	C	]1:228934655]C	82	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=62260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_228928001_228953001_20C;SPAN=1007160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:15:7.5:82.5,7.5,0:27:0:-82.52:82.52
1	228154057	416704:1	G	[7:100470421[G	79	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=416704:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100450001_100475001_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:15:7.2:79.2,7.2,0:14:19:-79.22:79.22
1	228212126	62042:1	C	C[7:100658692[	20	PASS	EVDNC=ASSMB;INSERTION=TGGAGGGTTTGGGAGCCTGTCCA;MAPQ=60;MATEID=62042:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_228193001_228218001_63C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
1	228934655	62260:2	G	G[1:227927495[	82	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=62260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_228928001_228953001_20C;SPAN=1007160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:15:7.5:82.5,7.5,0:27:0:-82.52:82.52
1	230555216	62473:1	G	]1:230555362]G	21	PASS	EVDNC=ASSMB;HOMSEQ=GCCTGTAATCCCAGC;MAPQ=60;MATEID=62473:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_230545001_230570001_6C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23
1	230555362	62473:2	C	C[1:230555216[	21	PASS	EVDNC=ASSMB;HOMSEQ=GCCTGTAATCCCAGC;MAPQ=60;MATEID=62473:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_230545001_230570001_6C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23
1	232116541	62784:1	A	A]7:98344850]	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATTCTCCTGCCTCA;MAPQ=60;MATEID=62784:2;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_1_232113001_232138001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:14:2:-46.21:46.21
1	233826553	63177:1	T	T[1:233827866[	46	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=63177:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:233826553(+)-1:233827866(-)__1_233828001_233853001D;SPAN=1313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:0:4.2:46.2,4.2,0:0:16:-46.21:46.21
1	233827866	63177:2	A	]1:233826553]A	46	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=63177:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:233826553(+)-1:233827866(-)__1_233828001_233853001D;SPAN=1313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:0:4.2:46.2,4.2,0:0:16:-46.21:46.21
1	234776441	63373:2	A	[1:16725253[A	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=GCAGAAGCCGGCGGGATGGGGC;MAPQ=60;MATEID=63373:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_234759001_234784001_38C;SPAN=218051188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:81:22:22.5:247.5,22.5,0:52:53:-247.6:247.6
1	235078244	63458:1	G	]1:235078726]G	18	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=63458:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:235078244(-)-1:235078726(+)__1_235077501_235102501D;SPAN=482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76
1	235078726	63458:2	G	G[1:235078244[	18	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=63458:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:235078244(-)-1:235078726(+)__1_235077501_235102501D;SPAN=482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76
1	236958951	63979:1	A	A[1:236961747[	39	PASS	EVDNC=ASSMB;INSERTION=TTCTAGGAAGGAGGTGCACATC;MAPQ=60;MATEID=63979:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_236939501_236964501_2C;SPAN=2796;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61
1	236961747	63979:2	T	]1:236958951]T	39	PASS	EVDNC=ASSMB;INSERTION=TTCTAGGAAGGAGGTGCACATC;MAPQ=60;MATEID=63979:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_236939501_236964501_2C;SPAN=2796;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61
1	237031073	64001:1	C	C[1:237031884[	25	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=64001:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_237013001_237038001_32C;SPAN=811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99
1	237031884	64001:2	G	]1:237031073]G	25	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=64001:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_237013001_237038001_32C;SPAN=811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99
1	237402791	64097:1	A	A]1:237402976]	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237402791(+)-1:237402976(+)__1_237380501_237405501D;SPAN=185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
1	237402976	64097:2	A	A]1:237402791]	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237402791(+)-1:237402976(+)__1_237380501_237405501D;SPAN=185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
1	237925038	64246:1	T	]1:237966824]T	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64246:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237925038(-)-1:237966824(+)__1_237944001_237969001D;SPAN=41786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
1	237966824	64246:2	T	T[1:237925038[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64246:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237925038(-)-1:237966824(+)__1_237944001_237969001D;SPAN=41786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
1	239952717	64778:1	T	[1:239953384[T	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAGCTC;MAPQ=60;MATEID=64778:2;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_1_239953001_239978001_1C;SPAN=667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:19:18:-72.62:72.62
1	239953183	64780:1	T	T]1:239953450]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64780:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:239953183(+)-1:239953450(+)__1_239953001_239978001D;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
1	239953384	64778:2	C	[1:239952717[C	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAGCTC;MAPQ=60;MATEID=64778:1;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_1_239953001_239978001_1C;SPAN=667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:19:18:-72.62:72.62
1	239953450	64780:2	T	T]1:239953183]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64780:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:239953183(+)-1:239953450(+)__1_239953001_239978001D;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
1	241920572	65248:1	C	]1:241920722]C	72	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAGTGCTGG;MAPQ=60;MATEID=65248:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_241913001_241938001_3C;SPAN=150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58
1	241920722	65248:2	G	G[1:241920572[	72	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAGTGCTGG;MAPQ=60;MATEID=65248:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_241913001_241938001_3C;SPAN=150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58
1	242964495	65568:1	G	G[1:242965914[	49	PASS	DISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=65568:2;MATENM=19;NM=2;NUMPARTS=2;SCTG=c_1_242942001_242967001_8C;SPAN=1419;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:5:4.5:49.5,4.5,0:15:7:-49.51:49.51
1	242965914	65568:2	G	]1:242964495]G	49	PASS	DISC_MAPQ=21;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=65568:1;MATENM=2;NM=19;NUMPARTS=2;SCTG=c_1_242942001_242967001_8C;SPAN=1419;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:5:4.5:49.5,4.5,0:15:7:-49.51:49.51
1	243619556	65663:1	A	A[1:243620461[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=65663:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:243619556(+)-1:243620461(-)__1_243603501_243628501D;SPAN=905;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91
1	243620461	65663:2	A	]1:243619556]A	42	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=65663:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:243619556(+)-1:243620461(-)__1_243603501_243628501D;SPAN=905;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91
1	247687256	66816:1	G	G[1:247693206[	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=66816:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:247687256(+)-1:247693206(-)__1_247670501_247695501D;SPAN=5950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
1	247693206	66816:2	A	]1:247687256]A	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=66816:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:247687256(+)-1:247693206(-)__1_247670501_247695501D;SPAN=5950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
1	247888190	66912:1	T	T[1:247894337[	89	PASS	EVDNC=ASSMB;HOMSEQ=GCATGTATTTATTT;MAPQ=60;MATEID=66912:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_1_247891001_247916001_24C;SPAN=6147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12
1	247894337	66912:2	G	]1:247888190]G	89	PASS	EVDNC=ASSMB;HOMSEQ=GCATGTATTTATTT;MAPQ=60;MATEID=66912:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_1_247891001_247916001_24C;SPAN=6147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12
1	248752958	891075:1	A	A]21:6070645]	26	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=891075:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:248752958(+)-21:6070645(+)__21_6051501_6076501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:2:2.4:26.4,2.4,0:0:9:-26.41:26.41
2	1099575	67773:1	T	]2:1099681]T	56	PASS	EVDNC=ASSMB;HOMSEQ=TCTGAAGGTGGGTGTAGTGAGGGCAGT;MAPQ=60;MATEID=67773:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_2_1078001_1103001_15C;SPAN=106;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:44:53.6:56.9,0,53.6:21:0:-56.96:56.96
2	1099681	67773:2	T	T[2:1099575[	56	PASS	EVDNC=ASSMB;HOMSEQ=TCTGAAGGTGGGTGTAGTGAGGGCAGT;MAPQ=60;MATEID=67773:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_2_1078001_1103001_15C;SPAN=106;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:44:53.6:56.9,0,53.6:21:0:-56.96:56.96
2	1111743	67779:1	A	]2:1112592]A	37	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=67779:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:1111743(-)-2:1112592(+)__2_1102501_1127501D;SPAN=849;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:32:37.4:37.4,0,40.7:0:14:-37.22:37.25
2	1112592	67779:2	G	G[2:1111743[	37	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=67779:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:1111743(-)-2:1112592(+)__2_1102501_1127501D;SPAN=849;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:32:37.4:37.4,0,40.7:0:14:-37.22:37.25
2	1751730	68180:1	G	]2:1751781]G	86	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGAGGTCTTGAGGGTCCTCACCTTGTTAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGGGGTCTTGAGGGTCCTCACCTTGTGAGAGT;MAPQ=60;MATEID=68180:2;MATENM=1;NM=0;NUMPARTS=4;SCTG=c_2_1739501_1764501_123C;SPAN=51;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:69:86.3:86.3,0,86.3:32:0:-86.24:86.24
2	1751781	68180:2	T	T[2:1751730[	86	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGAGGTCTTGAGGGTCCTCACCTTGTTAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGGGGTCTTGAGGGTCCTCACCTTGTGAGAGT;MAPQ=60;MATEID=68180:1;MATENM=0;NM=1;NUMPARTS=4;SCTG=c_2_1739501_1764501_123C;SPAN=51;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:69:86.3:86.3,0,86.3:32:0:-86.24:86.24
2	2750138	68404:1	G	]2:2750607]G	19	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=68404:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:2750138(-)-2:2750607(+)__2_2744001_2769001D;SPAN=469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
2	2750607	68404:2	T	T[2:2750138[	19	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=68404:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:2750138(-)-2:2750607(+)__2_2744001_2769001D;SPAN=469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
2	3046153	996191:1	T	]Un_JTFH01000155v1_decoy:2887]T	69	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=996191:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_998_1_2887_0C;SPAN=-1;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:7:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	3046162	996192:1	T	T[Un_JTFH01000155v1_decoy:1[	59	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=996192:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_998_1_2887_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:6:5.4:59.4,5.4,0:20:0:-59.41:59.41
2	3046162	68513:1	T	T[Un_JTFH01000155v1_decoy:1[	72	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=68513:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_3038001_3063001_29C;SPAN=-1;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76
2	3141039	68552:1	G	]2:3141594]G	37	PASS	DISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=GTCCACTCCCACAGCCCCTCAATCAATGCTGATAGACATGGAATCAT;MAPQ=60;MATEID=68552:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_3136001_3161001_53C;SPAN=555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:10:4:-37.5:37.51
2	3141594	68552:2	T	T[2:3141039[	37	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GTCCACTCCCACAGCCCCTCAATCAATGCTGATAGACATGGAATCAT;MAPQ=27;MATEID=68552:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_3136001_3161001_53C;SPAN=555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:10:4:-37.5:37.51
2	3448579	68680:1	A	]2:3448762]A	15	PASS	EVDNC=ASSMB;HOMSEQ=AGGGCGTGGAGAGCAGCCGGTTAC;MAPQ=60;MATEID=68680:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_3430001_3455001_33C;SPAN=183;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
2	3448762	68680:2	C	C[2:3448579[	15	PASS	EVDNC=ASSMB;HOMSEQ=AGGGCGTGGAGAGCAGCCGGTTAC;MAPQ=60;MATEID=68680:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_3430001_3455001_33C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
2	3592332	760178:1	G	[16:31103571[G	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTCC;MAPQ=60;MATEID=760178:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_31090501_31115501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:8:2:-24.99:24.99
2	4274462	933497:1	C	[X:64512169[C	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=933497:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_64508501_64533501_2C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:7:5:-36.31:36.31
2	4733720	69159:1	A	A[2:4739767[	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAGATACTGCA;MAPQ=60;MATEID=69159:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_4728501_4753501_22C;SPAN=6047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:21:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	4739767	69159:2	A	]2:4733720]A	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAGATACTGCA;MAPQ=60;MATEID=69159:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_4728501_4753501_22C;SPAN=6047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:21:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	5022592	69326:1	A	]2:5023212]A	83	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=69326:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:5022592(-)-2:5023212(+)__2_5022501_5047501D;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:56:56.9:83.3,0,56.9:0:30:-83.54:83.54
2	5023212	69326:2	A	A[2:5022592[	83	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=69326:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:5022592(-)-2:5023212(+)__2_5022501_5047501D;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:56:56.9:83.3,0,56.9:0:30:-83.54:83.54
2	5347649	69456:1	T	T[2:5347903[	49	PASS	EVDNC=ASSMB;HOMSEQ=TCTTCTGAATTTCT;MAPQ=60;MATEID=69456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_5341001_5366001_85C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74
2	5347903	69456:2	T	]2:5347649]T	49	PASS	EVDNC=ASSMB;HOMSEQ=TCTTCTGAATTTCT;MAPQ=60;MATEID=69456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_5341001_5366001_85C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74
2	5987300	69642:2	G	G]1:202207989]	26	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=69642:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:202207989(+)-2:5987300(+)__2_5978001_6003001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
2	5997703	69640:2	T	[1:201949360[T	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=69640:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_5978001_6003001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:8:5:-31.6:31.6
2	6260376	69707:1	C	C[2:6262062[	50	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=69707:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_6247501_6272501_84C;SPAN=1686;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33
2	6262062	69707:2	A	]2:6260376]A	50	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=69707:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_6247501_6272501_84C;SPAN=1686;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33
2	6495945	69807:1	G	]2:6496024]G	36	PASS	EVDNC=ASSMB;HOMSEQ=GCTTC;MAPQ=32;MATEID=69807:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_6492501_6517501_61C;SPAN=79;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:47:36.5:36.5,0,79.4:15:0:-36.3:37.28
2	6496024	69807:2	C	C[2:6495945[	36	PASS	EVDNC=ASSMB;HOMSEQ=GCTTC;MAPQ=60;MATEID=69807:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_6492501_6517501_61C;SPAN=79;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:47:36.5:36.5,0,79.4:15:0:-36.3:37.28
2	6658148	69895:1	C	C[18:12202407[	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=69895:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:6658148(+)-18:12202407(-)__2_6639501_6664501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
2	9998890	70988:1	A	[13:85488927[A	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATATAT;MAPQ=60;MATEID=70988:2;MATENM=48;NM=0;NUMPARTS=2;SCTG=c_2_9996001_10021001_50C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:6:4.8:52.8,4.8,0:11:8:-52.81:52.81
2	10011510	70991:1	C	]2:10013339]C	25	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=70991:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10011510(-)-2:10013339(+)__2_9996001_10021001D;SPAN=1829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:39:25.4:25.4,0,71.6:0:11:-25.35:26.63
2	10013339	70991:2	T	T[2:10011510[	25	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=70991:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10011510(-)-2:10013339(+)__2_9996001_10021001D;SPAN=1829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:39:25.4:25.4,0,71.6:0:11:-25.35:26.63
2	10291379	71120:1	A	A[2:10291576[	65	PASS	EVDNC=ASSMB;INSERTION=TACGTATATACACATATATACGTATACATATACACGTATATATACATATATGTATACGTATACGTATACACGTATATATACATATG;MAPQ=60;MATEID=71120:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_10290001_10315001_45C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:27:2.3:65,0,2.3:22:0:-68.44:68.44
2	10291576	71120:2	T	]2:10291379]T	65	PASS	EVDNC=ASSMB;INSERTION=TACGTATATACACATATATACGTATACATATACACGTATATATACATATATGTATACGTATACGTATACACGTATATATACATATG;MAPQ=60;MATEID=71120:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_10290001_10315001_45C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:27:2.3:65,0,2.3:22:0:-68.44:68.44
2	10629240	71249:1	C	]2:10629728]C	13	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=71249:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10629240(-)-2:10629728(+)__2_10608501_10633501D;SPAN=488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36
2	10629241	71250:1	A	]2:10629638]A	35	PASS	EVDNC=ASSMB;INSERTION=TGCAAAGAAATGTAACAGAATTATTT;MAPQ=60;MATEID=71250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_10608501_10633501_34C;SPAN=397;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:49:35.9:35.9,0,85.4:15:0:-35.74:36.95
2	10629638	71250:2	A	A[2:10629241[	35	PASS	EVDNC=ASSMB;INSERTION=TGCAAAGAAATGTAACAGAATTATTT;MAPQ=60;MATEID=71250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_10608501_10633501_34C;SPAN=397;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:49:35.9:35.9,0,85.4:15:0:-35.74:36.95
2	10629728	71249:2	T	T[2:10629240[	13	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=71249:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10629240(-)-2:10629728(+)__2_10608501_10633501D;SPAN=488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36
2	11380447	71691:1	A	A[2:11380717[	45	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=71691:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_11368001_11393001_71C;SPAN=270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:39:45.2:45.2,0,51.8:17:0:-45.15:45.19
2	11380717	71691:2	G	]2:11380447]G	45	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=71691:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_11368001_11393001_71C;SPAN=270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:39:45.2:45.2,0,51.8:17:0:-45.15:45.19
2	11853890	71889:1	G	]2:11854829]G	13	PASS	DISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=GATGATGCAGGGTGAGTGCTTAGACCCACTGCTTCCAGAATGCCTGTGCATTCACCCCGATGATGCAGGGTGAG;MAPQ=35;MATEID=71889:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_2_11833501_11858501_84C;SPAN=939;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:8:2:-13.76:17.53
2	11854829	71889:2	G	G[2:11853890[	13	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GATGATGCAGGGTGAGTGCTTAGACCCACTGCTTCCAGAATGCCTGTGCATTCACCCCGATGATGCAGGGTGAG;MAPQ=18;MATEID=71889:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_2_11833501_11858501_84C;SPAN=939;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:8:2:-13.76:17.53
2	14239176	72679:1	T	T[2:14245877[	17	PASS	EVDNC=ASSMB;INSERTION=AACCTCACCT;MAPQ=60;MATEID=72679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14234501_14259501_51C;SPAN=6701;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
2	14245877	72679:2	C	]2:14239176]C	17	PASS	EVDNC=ASSMB;INSERTION=AACCTCACCT;MAPQ=60;MATEID=72679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14234501_14259501_51C;SPAN=6701;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
2	14391167	72772:1	C	C[2:14391495[	40	PASS	EVDNC=ASSMB;INSERTION=AATGTCA;MAPQ=60;MATEID=72772:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14381501_14406501_96C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
2	14391495	72772:2	T	]2:14391167]T	40	PASS	EVDNC=ASSMB;INSERTION=AATGTCA;MAPQ=60;MATEID=72772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14381501_14406501_96C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
2	14564047	72832:1	G	G[2:14569993[	62	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=72832:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14553001_14578001_5C;SPAN=5946;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:35:23.3:62.9,0,23.3:22:0:-63.65:63.65
2	14569993	72832:2	A	]2:14564047]A	62	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=72832:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14553001_14578001_5C;SPAN=5946;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:35:23.3:62.9,0,23.3:22:0:-63.65:63.65
2	15475786	73136:1	A	]2:15492424]A	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=73136:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_15484001_15509001_176C;SPAN=16638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:29:14.9:57.8,0,14.9:18:9:-59.26:59.26
2	15492424	73136:2	A	A[2:15475786[	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=73136:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_15484001_15509001_176C;SPAN=16638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:29:14.9:57.8,0,14.9:18:9:-59.26:59.26
2	16110969	73436:1	T	T[2:16111310[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTCTCCACCCTCCG;MAPQ=60;MATEID=73436:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_2_16096501_16121501_39C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:28:11.7:128.7,11.7,0:36:9:-128.7:128.7
2	16111310	73436:2	G	]2:16110969]G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTCTCCACCCTCCG;MAPQ=60;MATEID=73436:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_2_16096501_16121501_39C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:28:11.7:128.7,11.7,0:36:9:-128.7:128.7
2	16131544	73449:1	G	G[2:16133693[	46	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=73449:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16131544(+)-2:16133693(-)__2_16121001_16146001D;SPAN=2149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21
2	16133693	73449:2	A	]2:16131544]A	46	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=73449:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16131544(+)-2:16133693(-)__2_16121001_16146001D;SPAN=2149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21
2	16224895	73484:1	T	T]2:16225346]	20	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=73484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16224895(+)-2:16225346(+)__2_16219001_16244001D;SPAN=451;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:0:9:-20.43:21.63
2	16225346	73484:2	T	T]2:16224895]	20	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=73484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16224895(+)-2:16225346(+)__2_16219001_16244001D;SPAN=451;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:0:9:-20.43:21.63
2	18392977	74156:1	T	T[2:18393259[	30	PASS	EVDNC=ASSMB;HOMSEQ=GTGAAAGATCTTT;MAPQ=60;MATEID=74156:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_18375001_18400001_27C;SPAN=282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
2	18393259	74156:2	G	]2:18392977]G	30	PASS	EVDNC=ASSMB;HOMSEQ=GTGAAAGATCTTT;MAPQ=60;MATEID=74156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_18375001_18400001_27C;SPAN=282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
2	19412343	74443:1	T	]2:19424559]T	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=74443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:19412343(-)-2:19424559(+)__2_19404001_19429001D;SPAN=12216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:0:9:-18.75:20.87
2	19424559	74443:2	C	C[2:19412343[	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=74443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:19412343(-)-2:19424559(+)__2_19404001_19429001D;SPAN=12216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:0:9:-18.75:20.87
2	19567822	74511:1	T	T[2:19570802[	46	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=74511:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_19551001_19576001_28C;SPAN=2980;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
2	19570802	74511:2	G	]2:19567822]G	46	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=74511:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_19551001_19576001_28C;SPAN=2980;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
2	20466917	74769:1	G	G[2:20467212[	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATGCCATGTG;MAPQ=60;MATEID=74769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20457501_20482501_24C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:12:5:-51.34:51.34
2	20467212	74769:2	A	]2:20466917]A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATGCCATGTG;MAPQ=60;MATEID=74769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20457501_20482501_24C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:12:5:-51.34:51.34
2	20809619	74841:1	C	]2:20845442]C	37	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=74841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20825001_20850001_18C;SPAN=35823;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78
2	20845442	74841:2	A	A[2:20809619[	37	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=74841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20825001_20850001_18C;SPAN=35823;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78
2	21964098	75152:1	A	]2:21970342]A	19	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=75152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21952001_21977001_1C;SPAN=6244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48
2	21970342	75152:2	C	C[2:21964098[	19	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=75152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21952001_21977001_1C;SPAN=6244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48
2	21986910	75157:1	C	]2:21995787]C	27	PASS	EVDNC=ASSMB;INSERTION=AATT;MAPQ=60;MATEID=75157:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21976501_22001501_19C;SPAN=8877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:12:0:-27.24:28.84
2	21995787	75157:2	G	G[2:21986910[	27	PASS	EVDNC=ASSMB;INSERTION=AATT;MAPQ=60;MATEID=75157:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21976501_22001501_19C;SPAN=8877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:12:0:-27.24:28.84
2	26333431	989648:1	A	[Un_KN707840v1_decoy:1[A	89	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=989648:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_691_1_3298_13C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:10:8.1:89.1,8.1,0:29:0:-89.12:89.12
2	26714469	996560:1	G	]Un_JTFH01000208v1_decoy:2601]G	82	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=996560:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1051_1_2601_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:7:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	30640060	77857:1	C	]2:30738106]C	33	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=77857:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_30723001_30748001_4C;SPAN=98046;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:23:23.3:33.2,0,23.3:12:0:-33.21:33.21
2	30738106	77857:2	C	C[2:30640060[	33	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=77857:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_30723001_30748001_4C;SPAN=98046;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:23:23.3:33.2,0,23.3:12:0:-33.21:33.21
2	31119875	77958:1	G	G[2:31120175[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATAATGAGCTAG;MAPQ=60;MATEID=77958:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_31115001_31140001_98C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:30:8.4:92.4,8.4,0:22:10:-92.42:92.42
2	31120175	77958:2	A	]2:31119875]A	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATAATGAGCTAG;MAPQ=60;MATEID=77958:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_31115001_31140001_98C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:30:8.4:92.4,8.4,0:22:10:-92.42:92.42
2	31423208	769777:1	A	[16:70087940[A	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=769777:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_70070001_70095001_81C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:14:9.6:105.6,9.6,0:26:21:-105.6:105.6
2	31823482	78199:2	T	]1:58631258]T	52	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=78199:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:58631258(+)-2:31823482(-)__2_31801001_31826001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:15:4.8:52.8,4.8,0:0:18:-52.81:52.81
2	32866671	78642:1	T	T[2:32870557[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAATATTCCAT;MAPQ=60;MATEID=78642:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_32854501_32879501_56C;SPAN=3886;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:11:12:-59.38:59.38
2	32870557	78642:2	A	]2:32866671]A	56	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAATATTCCAT;MAPQ=60;MATEID=78642:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_32854501_32879501_56C;SPAN=3886;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:11:12:-59.38:59.38
2	32999395	78690:1	A	A[2:33002226[	72	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=78690:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_33001501_33026501_15C;SPAN=2831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
2	33002226	78690:2	C	]2:32999395]C	72	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=78690:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_33001501_33026501_15C;SPAN=2831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
2	33894159	926022:1	T	[X:11714296[T	17	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=926022:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_11711001_11736001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:3:5:-17.49:17.74
2	34298589	79234:1	G	G[2:34300653[	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=79234:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_34300001_34325001_16C;SPAN=2064;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:10:9.6:105.6,9.6,0:35:0:-105.6:105.6
2	34300653	79234:2	G	]2:34298589]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=79234:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_34300001_34325001_16C;SPAN=2064;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:10:9.6:105.6,9.6,0:35:0:-105.6:105.6
2	34418581	79317:1	T	T[2:34418871[	89	PASS	EVDNC=ASSMB;HOMSEQ=AACTCTCTTGGAATTTCT;MAPQ=60;MATEID=79317:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_34398001_34423001_92C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:15:8.1:89.1,8.1,0:29:0:-89.12:89.12
2	34418871	79317:2	A	]2:34418581]A	89	PASS	EVDNC=ASSMB;HOMSEQ=AACTCTCTTGGAATTTCT;MAPQ=60;MATEID=79317:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_34398001_34423001_92C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:15:8.1:89.1,8.1,0:29:0:-89.12:89.12
2	35865456	80027:1	A	A[2:35865762[	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATAAAGAGAAA;MAPQ=60;MATEID=80027:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_35843501_35868501_176C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:13:6:-49.68:49.68
2	35865762	80027:2	A	]2:35865456]A	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATAAAGAGAAA;MAPQ=60;MATEID=80027:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_35843501_35868501_176C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:13:6:-49.68:49.68
2	36728531	80380:1	T	T[2:36728834[	47	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAAAAAATATT;MAPQ=60;MATEID=80380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_36725501_36750501_23C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
2	36728834	80380:2	A	]2:36728531]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAAAAAATATT;MAPQ=60;MATEID=80380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_36725501_36750501_23C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
2	37848471	80767:1	C	]2:37848614]C	8	PASS	EVDNC=ASSMB;INSERTION=ATT;MAPQ=60;MATEID=80767:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_37828001_37853001_4C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73
2	37848614	80767:2	T	T[2:37848471[	8	PASS	EVDNC=ASSMB;INSERTION=ATT;MAPQ=60;MATEID=80767:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_37828001_37853001_4C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73
2	37874819	80820:1	G	]2:38031160]G	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=80820:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_38024001_38049001_2C;SPAN=156341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:8:7:-32.06:32.06
2	38031160	80820:2	T	T[2:37874819[	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=80820:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_38024001_38049001_2C;SPAN=156341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:8:7:-32.06:32.06
2	40326783	81573:1	G	]2:40368222]G	30	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=81573:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_40351501_40376501_18C;SPAN=41439;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
2	40368222	81573:2	G	G[2:40326783[	30	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=81573:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_40351501_40376501_18C;SPAN=41439;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
2	40670800	81728:1	C	]2:40734469]C	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=81728:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40719001_40744001_102C;SPAN=63669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:6:10:-29:29.05
2	40734469	81728:2	T	T[2:40670800[	29	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=81728:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40719001_40744001_102C;SPAN=63669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:6:10:-29:29.05
2	40869772	81804:2	T	T[1:73903568[	18	PASS	EVDNC=ASSMB;INSERTION=GAT;MAPQ=60;MATEID=81804:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40866001_40891001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
2	41011229	81856:1	A	A[2:41023154[	36	PASS	EVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=81856:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_41013001_41038001_41C;SPAN=11925;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31
2	41023154	81856:2	A	]2:41011229]A	36	PASS	EVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=81856:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_41013001_41038001_41C;SPAN=11925;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31
2	41825584	234074:1	T	T[4:65548212[	49	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=234074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:41825584(+)-4:65548212(-)__4_65537501_65562501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51
2	42431514	82399:1	A	]2:42651232]A	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGT;MAPQ=60;MATEID=82399:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_42630001_42655001_20C;SPAN=219718;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:6:8:-35.78:35.78
2	42651232	82399:2	T	T[2:42431514[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGT;MAPQ=60;MATEID=82399:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_42630001_42655001_20C;SPAN=219718;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:6:8:-35.78:35.78
2	43431646	82614:1	T	T[2:43432156[	6	PASS	EVDNC=ASSMB;HOMSEQ=AATTTTTTGTACTTTT;MAPQ=60;MATEID=82614:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_43414001_43439001_54C;SPAN=510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:36:6.5:6.5,0,82.4:5:0:-6.386:10.37
2	43432156	82614:2	A	]2:43431646]A	6	PASS	EVDNC=ASSMB;HOMSEQ=AATTTTTTGTACTTTT;MAPQ=60;MATEID=82614:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_43414001_43439001_54C;SPAN=510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:36:6.5:6.5,0,82.4:5:0:-6.386:10.37
2	44240073	82829:1	C	C[2:44241692[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=82829:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:44240073(+)-2:44241692(-)__2_44222501_44247501D;SPAN=1619;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91
2	44241692	82829:2	A	]2:44240073]A	42	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=82829:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:44240073(+)-2:44241692(-)__2_44222501_44247501D;SPAN=1619;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91
2	47092142	948741:1	G	[X:154456620[G	56	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=948741:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_154448001_154473001_7C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:12:9:-56.11:56.11
2	47385991	83671:1	C	]2:47440172]C	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=83671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_47432001_47457001_26C;SPAN=54181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21
2	47440172	83671:2	T	T[2:47385991[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=83671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_47432001_47457001_26C;SPAN=54181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21
2	47582850	914841:1	T	[22:23853676[T	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=914841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_79C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:15:2:-49.48:49.48
2	48624053	84132:1	A	A[2:48630814[	58	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=84132:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_48608001_48633001_62C;SPAN=6761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
2	48630814	84132:2	T	]2:48624053]T	58	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=84132:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_48608001_48633001_62C;SPAN=6761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
2	49385759	84300:1	T	T[2:49386067[	89	PASS	EVDNC=ASSMB;HOMSEQ=CAATATTTTTACTCTT;MAPQ=60;MATEID=84300:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_49367501_49392501_53C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:24:8.1:89.1,8.1,0:29:0:-89.12:89.12
2	49386067	84300:2	C	]2:49385759]C	89	PASS	EVDNC=ASSMB;HOMSEQ=CAATATTTTTACTCTT;MAPQ=60;MATEID=84300:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_49367501_49392501_53C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:24:8.1:89.1,8.1,0:29:0:-89.12:89.12
2	49597021	84369:1	A	A[2:49597348[	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=84369:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49588001_49613001_28C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
2	49597348	84369:2	A	]2:49597021]A	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=84369:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49588001_49613001_28C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
2	49725367	84398:1	T	]2:49726478]T	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCA;MAPQ=60;MATEID=84398:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49710501_49735501_34C;SPAN=1111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:39:38.6:38.6,0,58.4:11:11:-38.55:38.8
2	49726478	84398:2	A	A[2:49725367[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCA;MAPQ=60;MATEID=84398:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49710501_49735501_34C;SPAN=1111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:39:38.6:38.6,0,58.4:11:11:-38.55:38.8
2	49836216	84429:1	G	]2:49842728]G	23	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=84429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49833001_49858001_8C;SPAN=6512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
2	49842728	84429:2	G	G[2:49836216[	23	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=84429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49833001_49858001_8C;SPAN=6512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
2	50587435	84741:1	T	T]2:50589480]	52	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=84741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:50587435(+)-2:50589480(+)__2_50568001_50593001D;SPAN=2045;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81
2	50589480	84741:2	C	C]2:50587435]	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=84741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:50587435(+)-2:50589480(+)__2_50568001_50593001D;SPAN=2045;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81
2	54338356	85639:1	G	G[2:54340337[	99	PASS	EVDNC=ASSMB;INSERTION=TAA;MAPQ=60;MATEID=85639:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_54316501_54341501_38C;SPAN=1981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:21:11.7:128.7,11.7,0:42:0:-128.7:128.7
2	54340337	85639:2	A	]2:54338356]A	99	PASS	EVDNC=ASSMB;INSERTION=TAA;MAPQ=60;MATEID=85639:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_54316501_54341501_38C;SPAN=1981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:21:11.7:128.7,11.7,0:42:0:-128.7:128.7
2	54466357	85680:1	T	T[2:54466606[	49	PASS	EVDNC=ASSMB;HOMSEQ=AAGTATGTTTATTCTT;MAPQ=60;MATEID=85680:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_54463501_54488501_20C;SPAN=249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:60:49.1:49.1,0,101.9:20:0:-49.15:50.17
2	54466606	85680:2	A	]2:54466357]A	49	PASS	EVDNC=ASSMB;HOMSEQ=AAGTATGTTTATTCTT;MAPQ=60;MATEID=85680:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_54463501_54488501_20C;SPAN=249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:60:49.1:49.1,0,101.9:20:0:-49.15:50.17
2	55567377	86186:1	T	]2:55678660]T	21	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=86186:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55664001_55689001_27C;SPAN=111283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4
2	55633365	86159:1	G	G[2:55633523[	28	PASS	EVDNC=ASSMB;HOMSEQ=TCCCAGCTACTGGGGAGGCTGAG;MAPQ=60;MATEID=86159:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_55615001_55640001_46C;SPAN=158;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
2	55633523	86159:2	T	]2:55633365]T	28	PASS	EVDNC=ASSMB;HOMSEQ=TCCCAGCTACTGGGGAGGCTGAG;MAPQ=60;MATEID=86159:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_55615001_55640001_46C;SPAN=158;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
2	55678660	86186:2	C	C[2:55567377[	21	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=86186:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55664001_55689001_27C;SPAN=111283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4
2	55843973	86245:1	A	A[2:55844263[	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=86245:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55835501_55860501_48C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:28:9.3:102.3,9.3,0:26:10:-102.3:102.3
2	55844263	86245:2	A	]2:55843973]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=86245:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55835501_55860501_48C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:28:9.3:102.3,9.3,0:26:10:-102.3:102.3
2	57115608	86554:1	T	T[2:57115922[	35	PASS	EVDNC=ASSMB;HOMSEQ=GCTAGTAGCTTTTT;MAPQ=60;MATEID=86554:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_57109501_57134501_28C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78
2	57115922	86554:2	G	]2:57115608]G	35	PASS	EVDNC=ASSMB;HOMSEQ=GCTAGTAGCTTTTT;MAPQ=60;MATEID=86554:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_57109501_57134501_28C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78
2	61473639	87757:1	T	[2:61476025[T	55	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCAGCCTCCCCAGTAGCTGGGA;MAPQ=60;MATEID=87757:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_61470501_61495501_64C;SPAN=2386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:27:12.2:55.1,0,12.2:14:10:-56.6:56.6
2	61476025	87757:2	C	[2:61473639[C	55	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCAGCCTCCCCAGTAGCTGGGA;MAPQ=60;MATEID=87757:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_61470501_61495501_64C;SPAN=2386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:27:12.2:55.1,0,12.2:14:10:-56.6:56.6
2	65580385	89177:1	T	T[2:65580684[	85	PASS	EVDNC=ASSMB;HOMSEQ=CATGTTACTTTT;MAPQ=60;MATEID=89177:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_65562001_65587001_72C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:16:7.8:85.8,7.8,0:28:0:-85.82:85.82
2	65580684	89177:2	C	]2:65580385]C	85	PASS	EVDNC=ASSMB;HOMSEQ=CATGTTACTTTT;MAPQ=60;MATEID=89177:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_65562001_65587001_72C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:16:7.8:85.8,7.8,0:28:0:-85.82:85.82
2	66278462	89363:1	T	T[2:66280422[	19	PASS	EVDNC=ASSMB;HOMSEQ=TATAT;MAPQ=60;MATEID=89363:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_66272501_66297501_17C;SPAN=1960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
2	66280422	89363:2	T	]2:66278462]T	19	PASS	EVDNC=ASSMB;HOMSEQ=TATAT;MAPQ=60;MATEID=89363:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_66272501_66297501_17C;SPAN=1960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
2	66762898	89508:1	T	]2:66763041]T	65	PASS	EVDNC=ASSMB;HOMSEQ=TATATGTGTGTATATATA;MAPQ=60;MATEID=89508:2;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_2_66762501_66787501_12C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36
2	66763041	89508:2	A	A[2:66762898[	65	PASS	EVDNC=ASSMB;HOMSEQ=TATATGTGTGTATATATA;MAPQ=60;MATEID=89508:1;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_2_66762501_66787501_12C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36
2	68687723	297711:1	T	T]5:65172244]	26	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=297711:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:68687723(+)-5:65172244(+)__5_65170001_65195001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7
2	68687747	90165:2	T	T[1:37472656[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATTAG;MAPQ=60;MATEID=90165:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:9:10:-42.24:42.24
2	68687751	90166:2	C	]1:37472775]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CCAG;MAPQ=60;MATEID=90166:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_68673501_68698501_111C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:18:5.1:56.1,5.1,0:19:0:-56.11:56.11
2	70434172	556451:1	T	T]10:77573728]	10	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ATAGAATAGAATAGAATAG;INSERTION=C;MAPQ=60;MATEID=556451:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATA;SCTG=c_10_77567001_77592001_32C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:3.4:10.3,0,3.4:2:9:-10.19:10.19
2	71662937	91046:1	T	]2:71663041]T	40	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTG;MAPQ=60;MATEID=91046:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_71662501_71687501_16C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96
2	71663041	91046:2	G	G[2:71662937[	40	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTG;MAPQ=60;MATEID=91046:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_71662501_71687501_16C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96
2	74269063	91744:1	A	]2:74518704]A	29	PASS	EVDNC=ASSMB;INSERTION=TC;MAPQ=60;MATEID=91744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_74504501_74529501_22C;SPAN=249641;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
2	74518704	91744:2	T	T[2:74269063[	29	PASS	EVDNC=ASSMB;INSERTION=TC;MAPQ=60;MATEID=91744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_74504501_74529501_22C;SPAN=249641;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
2	74561101	652191:1	A	[12:126832129[A	51	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=CTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCT;MAPQ=37;MATEID=652191:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_12_126812001_126837001_50C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:27:15.5:51.8,0,15.5:12:4:-52.86:52.86
2	76299386	92375:1	T	T[2:76301768[	66	PASS	EVDNC=ASSMB;HOMSEQ=GTTTTCCATGTTTT;MAPQ=60;MATEID=92375:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_76293001_76318001_29C;SPAN=2382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:22:0:-66.02:66.02
2	76301768	92375:2	G	]2:76299386]G	66	PASS	EVDNC=ASSMB;HOMSEQ=GTTTTCCATGTTTT;MAPQ=60;MATEID=92375:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_76293001_76318001_29C;SPAN=2382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:22:0:-66.02:66.02
2	76546427	92510:1	T	T[2:76548327[	99	PASS	EVDNC=ASSMB;INSERTION=TTATTCTTTTA;MAPQ=60;MATEID=92510:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_76538001_76563001_108C;SPAN=1900;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:21:10.2:112.2,10.2,0:37:0:-112.2:112.2
2	76548327	92510:2	A	]2:76546427]A	99	PASS	EVDNC=ASSMB;INSERTION=TTATTCTTTTA;MAPQ=60;MATEID=92510:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_76538001_76563001_108C;SPAN=1900;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:21:10.2:112.2,10.2,0:37:0:-112.2:112.2
2	77890765	92950:1	A	A[2:77891232[	59	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=92950:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_77885501_77910501_43C;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:25:2.9:59,0,2.9:20:0:-61.85:61.85
2	77891232	92950:2	A	]2:77890765]A	59	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=92950:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_77885501_77910501_43C;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:25:2.9:59,0,2.9:20:0:-61.85:61.85
2	78714738	93188:1	A	A[2:78715161[	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=93188:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_78694001_78719001_1C;SPAN=423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
2	78715161	93188:2	A	]2:78714738]A	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=93188:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_78694001_78719001_1C;SPAN=423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
2	78830532	93233:1	T	T[2:78830858[	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGAGTTTCTT;MAPQ=60;MATEID=93233:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_78816501_78841501_72C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:27:18.8:48.5,0,18.8:11:7:-49.21:49.21
2	78830858	93233:2	A	]2:78830532]A	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGAGTTTCTT;MAPQ=60;MATEID=93233:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_78816501_78841501_72C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:27:18.8:48.5,0,18.8:11:7:-49.21:49.21
2	82135166	94181:1	C	C[2:82135354[	49	PASS	EVDNC=ASSMB;HOMSEQ=CTATCTATCTATC;MAPQ=60;MATEID=94181:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_82124001_82149001_9C;SPAN=188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:25:12.8:49.1,0,12.8:17:0:-50.18:50.18
2	82135354	94181:2	C	]2:82135166]C	49	PASS	EVDNC=ASSMB;HOMSEQ=CTATCTATCTATC;MAPQ=60;MATEID=94181:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_82124001_82149001_9C;SPAN=188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:25:12.8:49.1,0,12.8:17:0:-50.18:50.18
2	83176495	94386:1	T	T[2:83178048[	35	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=94386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_83177501_83202501_120C;SPAN=1553;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
2	83178048	94386:2	G	]2:83176495]G	35	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=94386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_83177501_83202501_120C;SPAN=1553;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
2	85291998	94967:1	T	T[2:85292320[	29	PASS	EVDNC=ASSMB;HOMSEQ=GGTCATATGTATTTTT;MAPQ=60;MATEID=94967:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_85284501_85309501_12C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:71:29.6:29.6,0,148.4:15:0:-29.56:34.13
2	85292320	94967:2	G	]2:85291998]G	29	PASS	EVDNC=ASSMB;HOMSEQ=GGTCATATGTATTTTT;MAPQ=60;MATEID=94967:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_85284501_85309501_12C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:71:29.6:29.6,0,148.4:15:0:-29.56:34.13
2	85486995	922294:1	C	]22:49029656]C	26	PASS	DISC_MAPQ=15;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=922294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_49024501_49049501_90C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:7:4:-26.41:26.41
2	85510440	95053:1	C	C[2:85510844[	5	PASS	EVDNC=ASSMB;HOMSEQ=GTGATCCGCCCACCTCGGC;MAPQ=60;MATEID=95053:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_85505001_85530001_92C;SPAN=404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:40:5.3:5.3,0,94.4:5:0:-5.261:10.13
2	85510844	95053:2	G	]2:85510440]G	5	PASS	EVDNC=ASSMB;HOMSEQ=GTGATCCGCCCACCTCGGC;MAPQ=60;MATEID=95053:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_85505001_85530001_92C;SPAN=404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:40:5.3:5.3,0,94.4:5:0:-5.261:10.13
2	87411927	95712:1	A	]2:87415975]A	35	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=95712:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:87411927(-)-2:87415975(+)__2_87391501_87416501D;SPAN=4048;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:50:35.6:35.6,0,88.4:0:15:-35.46:36.79
2	87415975	95712:2	G	G[2:87411927[	35	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=95712:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:87411927(-)-2:87415975(+)__2_87391501_87416501D;SPAN=4048;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:50:35.6:35.6,0,88.4:0:15:-35.46:36.79
2	88301312	96152:1	T	T[2:88301624[	40	PASS	EVDNC=ASSMB;HOMSEQ=GAGACCTACTTTCTT;MAPQ=60;MATEID=96152:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_88298001_88323001_127C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
2	88301624	96152:2	G	]2:88301312]G	40	PASS	EVDNC=ASSMB;HOMSEQ=GAGACCTACTTTCTT;MAPQ=60;MATEID=96152:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_88298001_88323001_127C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
2	88729728	96278:1	G	G[2:88732766[	30	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATATTAAAACTAAG;MAPQ=60;MATEID=96278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_88714501_88739501_14C;SPAN=3038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:68:30.5:30.5,0,139.4:15:0:-30.4:34.45
2	88732766	96278:2	G	]2:88729728]G	30	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATATTAAAACTAAG;MAPQ=60;MATEID=96278:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_88714501_88739501_14C;SPAN=3038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:68:30.5:30.5,0,139.4:15:0:-30.4:34.45
2	90371363	96983:1	T	T[10:15915313[	92	PASS	DISC_MAPQ=1;EVDNC=ASDIS;INSERTION=TTTTTTTTTA;MAPQ=14;MATEID=96983:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_90356001_90381001_107C;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:81:92.9:92.9,0,109.4:27:14:-92.77:92.86
2	91409350	97080:1	A	A]16:34954400]	99	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=97080:2;MATENM=2;NM=5;NUMPARTS=2;SCTG=c_2_91385001_91410001_138C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:38:10.5:115.5,10.5,0:27:15:-115.5:115.5
2	91412660	97181:1	C	C[2:91412842[	55	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATCATC;INSERTION=TCGAATGGAATCATCATTGAGTGTAATCGAATGG;MAPQ=60;MATEID=97181:2;MATENM=3;NM=2;NUMPARTS=3;SCTG=c_2_91409501_91434501_201C;SECONDARY;SPAN=182;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:157:55.1:55.1,0,338.9:30:0:-54.9:66.78
2	91412842	97181:2	A	]2:91412660]A	55	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATCATC;INSERTION=TCGAATGGAATCATCATTGAGTGTAATCGAATGG;MAPQ=60;MATEID=97181:1;MATENM=2;NM=3;NUMPARTS=3;SCTG=c_2_91409501_91434501_201C;SECONDARY;SPAN=182;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:157:55.1:55.1,0,338.9:30:0:-54.9:66.78
2	91530893	97619:1	T	]2:91531369]T	51	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TTTATGTTATATATAATATAAACATGATGTATATTCTTAT;MAPQ=12;MATEID=97619:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_91507501_91532501_165C;SPAN=476;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:112:51.2:51.2,0,229.4:24:4:-51.04:57.56
2	91531369	97619:2	T	T[2:91530893[	51	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TTTATGTTATATATAATATAAACATGATGTATATTCTTAT;MAPQ=15;MATEID=97619:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_91507501_91532501_165C;SPAN=476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:112:51.2:51.2,0,229.4:24:4:-51.04:57.56
2	92308749	98845:1	A	]2:93108543]A	19	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=98845:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92308749(-)-2:93108543(+)__2_93100001_93125001D;SPAN=799794;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
2	92651208	98625:1	A	A[2:92867362[	24	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=98625:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92651208(+)-2:92867362(-)__2_92855001_92880001D;SPAN=216154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74
2	92743347	98519:1	C	C[2:94054277[	14	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=98519:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92743347(+)-2:94054277(-)__2_92732501_92757501D;SPAN=1310930;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:42:14.6:14.6,0,90.5:0:8:-14.6:17.8
2	92867362	98625:2	T	]2:92651208]T	24	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=98625:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92651208(+)-2:92867362(-)__2_92855001_92880001D;SPAN=216154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74
2	92875179	98636:1	G	G[2:93532754[	37	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=98636:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92875179(+)-2:93532754(-)__2_92855001_92880001D;SPAN=657575;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44
2	93108543	98845:2	T	T[2:92308749[	19	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=98845:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92308749(-)-2:93108543(+)__2_93100001_93125001D;SPAN=799794;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
2	93450067	99624:1	A	A[2:94089858[	22	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99624:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93450067(+)-2:94089858(-)__2_94080001_94105001D;SPAN=639791;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
2	93469219	99143:1	T	]2:93647620]T	26	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99143:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93469219(-)-2:93647620(+)__2_93467501_93492501D;SPAN=178401;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
2	93532754	98636:2	C	]2:92875179]C	37	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=98636:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92875179(+)-2:93532754(-)__2_92855001_92880001D;SPAN=657575;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44
2	93574645	99223:1	G	]2:93889839]G	39	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=99223:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93574645(-)-2:93889839(+)__2_93565501_93590501D;SPAN=315194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61
2	93647620	99143:2	T	T[2:93469219[	26	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=99143:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93469219(-)-2:93647620(+)__2_93467501_93492501D;SPAN=178401;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
2	93889839	99223:2	A	A[2:93574645[	39	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=99223:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93574645(-)-2:93889839(+)__2_93565501_93590501D;SPAN=315194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61
2	94038860	99636:1	T	]2:94087446]T	29	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=99636:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94038860(-)-2:94087446(+)__2_94080001_94105001D;SPAN=48586;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1
2	94054277	98519:2	T	]2:92743347]T	14	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=98519:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92743347(+)-2:94054277(-)__2_92732501_92757501D;SPAN=1310930;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:42:14.6:14.6,0,90.5:0:8:-14.6:17.8
2	94087446	99636:2	C	C[2:94038860[	29	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99636:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94038860(-)-2:94087446(+)__2_94080001_94105001D;SPAN=48586;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1
2	94089858	99624:2	A	]2:93450067]A	22	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=99624:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93450067(+)-2:94089858(-)__2_94080001_94105001D;SPAN=639791;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
2	94189122	99662:1	C	]20:27295507]C	50	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=99662:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94189122(-)-20:27295507(+)__2_94178001_94203001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:0:18:-51.49:51.49
2	94520458	99799:1	T	T[2:94537151[	61	PASS	DISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=ACATCACAAAGAAGTTTCTGAGAATGCTTCT;MAPQ=56;MATEID=99799:2;MATENM=0;NM=11;NUMPARTS=2;SCTG=c_2_94496501_94521501_88C;SPAN=16693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:29:11.6:61.1,0,11.6:9:14:-63.06:63.06
2	94537151	99799:2	A	]2:94520458]A	61	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ACATCACAAAGAAGTTTCTGAGAATGCTTCT;MAPQ=47;MATEID=99799:1;MATENM=11;NM=0;NUMPARTS=2;SCTG=c_2_94496501_94521501_88C;SPAN=16693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:29:11.6:61.1,0,11.6:9:14:-63.06:63.06
2	95544969	100172:1	A	[2:95545592[A	87	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=100172:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95544969(-)-2:95545592(-)__2_95525501_95550501D;SPAN=623;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:53:44.6:87.5,0,44.6:0:31:-88.13:88.13
2	95545592	100172:2	C	[2:95544969[C	87	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=100172:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95544969(-)-2:95545592(-)__2_95525501_95550501D;SPAN=623;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:53:44.6:87.5,0,44.6:0:31:-88.13:88.13
2	95830277	100286:1	C	]2:95957789]C	39	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=100286:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_95942001_95967001_156C;SPAN=127512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:36:39.5:39.5,0,49.4:15:0:-39.4:39.48
2	95957789	100286:2	T	T[2:95830277[	39	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=100286:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_95942001_95967001_156C;SPAN=127512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:36:39.5:39.5,0,49.4:15:0:-39.4:39.48
2	95974103	100699:1	A	]2:97572285]A	25	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=100699:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95974103(-)-2:97572285(+)__2_97559001_97584001D;SPAN=1598182;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
2	96816191	100522:1	A	]2:96984406]A	39	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=100522:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_96971001_96996001_45C;SPAN=168215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18
2	96984406	100522:2	A	A[2:96816191[	39	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=100522:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_96971001_96996001_45C;SPAN=168215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18
2	97123668	100702:1	T	[2:97579760[T	21	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=100702:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97123668(-)-2:97579760(-)__2_97559001_97584001D;SPAN=456092;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23
2	97194623	100638:1	A	[2:97545900[A	52	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=100638:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97194623(-)-2:97545900(-)__2_97191501_97216501D;SPAN=351277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:0:18:-53.39:53.39
2	97204302	100643:1	G	G[2:97208123[	5	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=100643:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97204302(+)-2:97208123(-)__2_97191501_97216501D;SPAN=3821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:75:5.3:5.3,0,183.5:0:8:-5.326:15.61
2	97208123	100643:2	A	]2:97204302]A	5	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=100643:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97204302(+)-2:97208123(-)__2_97191501_97216501D;SPAN=3821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:75:5.3:5.3,0,183.5:0:8:-5.326:15.61
2	97545900	100638:2	A	[2:97194623[A	52	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=100638:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97194623(-)-2:97545900(-)__2_97191501_97216501D;SPAN=351277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:0:18:-53.39:53.39
2	97572285	100699:2	A	A[2:95974103[	25	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=100699:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95974103(-)-2:97572285(+)__2_97559001_97584001D;SPAN=1598182;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
2	97579760	100702:2	T	[2:97123668[T	21	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=100702:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97123668(-)-2:97579760(-)__2_97559001_97584001D;SPAN=456092;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23
2	98616869	100962:1	C	]2:98691677]C	24	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=100962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_98686001_98711001_0C;SPAN=74808;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
2	98691677	100962:2	T	T[2:98616869[	24	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=100962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_98686001_98711001_0C;SPAN=74808;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
2	101616122	101893:1	C	C[2:101617126[	69	PASS	EVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=101893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_101601501_101626501_121C;SPAN=1004;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:27:0.9:69.3,0.9,0:23:0:-72.66:72.66
2	101617126	101893:2	A	]2:101616122]A	69	PASS	EVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=101893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_101601501_101626501_121C;SPAN=1004;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:27:0.9:69.3,0.9,0:23:0:-72.66:72.66
2	102706037	102218:1	C	C[2:102706360[	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATGAGTTCC;MAPQ=60;MATEID=102218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_102704001_102729001_71C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
2	102706360	102218:2	A	]2:102706037]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATGAGTTCC;MAPQ=60;MATEID=102218:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_102704001_102729001_71C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
2	104544191	102679:1	A	A[2:104549876[	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=102679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_104541501_104566501_111C;SPAN=5685;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
2	104549876	102679:2	A	]2:104544191]A	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=102679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_104541501_104566501_111C;SPAN=5685;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
2	106078622	103313:1	T	T[2:106079439[	38	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=103313:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_106060501_106085501_2C;SPAN=817;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
2	106079439	103313:2	T	]2:106078622]T	38	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=103313:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_106060501_106085501_2C;SPAN=817;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
2	108694098	104171:1	C	C[2:108695654[	50	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=104171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_108682001_108707001_109C;SPAN=1556;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01
2	108695654	104171:2	C	]2:108694098]C	50	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=104171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_108682001_108707001_109C;SPAN=1556;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01
2	110818831	104698:1	T	T[2:110819060[	40	PASS	EVDNC=ASSMB;HOMSEQ=TGAT;MAPQ=60;MATEID=104698:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_110813501_110838501_12C;SPAN=229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98
2	110819060	104698:2	T	]2:110818831]T	40	PASS	EVDNC=ASSMB;HOMSEQ=TGAT;MAPQ=60;MATEID=104698:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_110813501_110838501_12C;SPAN=229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98
2	112957280	105463:1	T	]2:113032263]T	25	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=105463:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_113018501_113043501_75C;SPAN=74983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:10:0:-25.7:25.87
2	113032263	105463:2	C	C[2:112957280[	25	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=105463:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_113018501_113043501_75C;SPAN=74983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:10:0:-25.7:25.87
2	113393765	105599:1	G	G[2:113396035[	99	PASS	DISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=AAAAACAGTATTGCTG;MAPQ=60;MATEID=105599:2;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_2_113386001_113411001_46C;SPAN=2270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:115:7:32.1:353.1,32.1,0:94:22:-353.2:353.2
2	113396035	105599:2	A	]2:113393765]A	99	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=AAAAACAGTATTGCTG;MAPQ=60;MATEID=105599:1;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_2_113386001_113411001_46C;SPAN=2270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:115:7:32.1:353.1,32.1,0:94:22:-353.2:353.2
2	114785557	106020:1	T	T[2:114785773[	28	PASS	EVDNC=ASSMB;INSERTION=GTTTGTTGTTCAGAATTTATTGTACTTTATT;MAPQ=60;MATEID=106020:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_114782501_114807501_13C;SPAN=216;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:12:0:-28.37:29.43
2	114785773	106020:2	A	]2:114785557]A	28	PASS	EVDNC=ASSMB;INSERTION=GTTTGTTGTTCAGAATTTATTGTACTTTATT;MAPQ=60;MATEID=106020:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_114782501_114807501_13C;SPAN=216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:12:0:-28.37:29.43
2	115619092	517334:1	G	]9:128694869]G	27	PASS	EVDNC=ASSMB;HOMSEQ=GTCTCT;MAPQ=60;MATEID=517334:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_9_128674001_128699001_56C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77
2	115619217	517337:1	A	A]9:128696493]	48	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=517337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:115619217(+)-9:128696493(+)__9_128674001_128699001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:0:17:-48.77:48.77
2	115904500	106447:1	G	G[2:115905081[	65	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=106447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_115885001_115910001_118C;SPAN=581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93
2	115905081	106447:2	A	]2:115904500]A	65	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=106447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_115885001_115910001_118C;SPAN=581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93
2	116216764	106565:1	C	[2:116224311[C	53	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGT;MAPQ=60;MATEID=106565:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_71C;SPAN=7547;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:43:53.9:53.9,0,53.9:10:11:-53.93:53.93
2	116217058	106566:1	T	T[2:116220728[	42	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=106566:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_42C;SPAN=3670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:48:42.8:42.8,0,75.8:17:0:-42.62:43.2
2	116220728	106566:2	T	]2:116217058]T	42	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=106566:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_42C;SPAN=3670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:48:42.8:42.8,0,75.8:17:0:-42.62:43.2
2	116224311	106565:2	T	[2:116216764[T	53	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGT;MAPQ=60;MATEID=106565:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_116203501_116228501_71C;SPAN=7547;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:43:53.9:53.9,0,53.9:10:11:-53.93:53.93
2	117135487	106904:1	C	C[2:117135814[	30	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATACATCC;MAPQ=60;MATEID=106904:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_117134501_117159501_18C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:222:30.1:30.1,0,528.5:28:0:-30.03:56.82
2	117135814	106904:2	A	]2:117135487]A	30	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATACATCC;MAPQ=60;MATEID=106904:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_117134501_117159501_18C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:222:30.1:30.1,0,528.5:28:0:-30.03:56.82
2	117262101	106966:1	C	C[2:117263734[	22	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=106966:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_117257001_117282001_22C;SPAN=1633;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:38:22.4:22.4,0,71.9:10:0:-22.33:23.85
2	117263734	106966:2	C	]2:117262101]C	22	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=106966:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_117257001_117282001_22C;SPAN=1633;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:38:22.4:22.4,0,71.9:10:0:-22.33:23.85
2	117291982	106977:1	A	A[2:117294929[	17	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=106977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117281501_117306501_19C;SPAN=2947;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63
2	117294929	106977:2	A	]2:117291982]A	17	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=106977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117281501_117306501_19C;SPAN=2947;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63
2	117466294	107039:1	A	A[2:117469493[	68	PASS	EVDNC=ASSMB;HOMSEQ=CACA;MAPQ=60;MATEID=107039:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117453001_117478001_40C;SPAN=3199;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:28:2:68,0,2:23:0:-71.75:71.75
2	117469493	107039:2	C	]2:117466294]C	68	PASS	EVDNC=ASSMB;HOMSEQ=CACA;MAPQ=60;MATEID=107039:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117453001_117478001_40C;SPAN=3199;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:28:2:68,0,2:23:0:-71.75:71.75
2	118895753	107559:1	T	T[2:118901793[	46	PASS	EVDNC=ASSMB;HOMSEQ=CGGCACTGGCTT;MAPQ=60;MATEID=107559:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_118898501_118923501_3C;SPAN=6040;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21
2	118901793	107559:2	C	]2:118895753]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CGGCACTGGCTT;MAPQ=60;MATEID=107559:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_118898501_118923501_3C;SPAN=6040;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21
2	119525207	107732:1	G	]2:119525569]G	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=107732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119511001_119536001_108C;SPAN=362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:48:26.3:26.3,0,92.3:12:0:-26.12:28.31
2	119525569	107732:2	G	G[2:119525207[	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=107732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119511001_119536001_108C;SPAN=362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:48:26.3:26.3,0,92.3:12:0:-26.12:28.31
2	119659504	107766:1	C	]2:119660912]C	78	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=GGC;MAPQ=60;MATEID=107766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_112C;SPAN=1408;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:49:42.5:78.8,0,42.5:23:16:-79.16:79.16
2	119659624	107767:1	C	C[2:119660920[	39	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=107767:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_83C;SPAN=1296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:47:39.8:39.8,0,76.1:16:0:-39.61:40.32
2	119660912	107766:2	C	C[2:119659504[	78	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=GGC;MAPQ=60;MATEID=107766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_112C;SPAN=1408;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:49:42.5:78.8,0,42.5:23:16:-79.16:79.16
2	119660920	107767:2	G	]2:119659624]G	39	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=107767:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_119658001_119683001_83C;SPAN=1296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:47:39.8:39.8,0,76.1:16:0:-39.61:40.32
2	120540055	108111:1	T	]2:120753069]T	34	PASS	EVDNC=ASSMB;INSERTION=ATAAGGGTCA;MAPQ=60;MATEID=108111:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_120736001_120761001_31C;SPAN=213014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76
2	120753069	108111:2	T	T[2:120540055[	34	PASS	EVDNC=ASSMB;INSERTION=ATAAGGGTCA;MAPQ=60;MATEID=108111:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_120736001_120761001_31C;SPAN=213014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76
2	121040233	108217:1	G	G[2:121040824[	24	PASS	EVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=108217:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_121030001_121055001_47C;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
2	121040824	108217:2	C	]2:121040233]C	24	PASS	EVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=108217:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_121030001_121055001_47C;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
2	122607302	108621:1	A	A[2:122607801[	82	PASS	EVDNC=ASSMB;INSERTION=ATGGCAAATTAAATCCACCCAAGTCTATCA;MAPQ=60;MATEID=108621:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_135C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:29:4.8:82.5,4.8,0:26:0:-83.85:83.85
2	122607801	108621:2	A	]2:122607302]A	82	PASS	EVDNC=ASSMB;INSERTION=ATGGCAAATTAAATCCACCCAAGTCTATCA;MAPQ=60;MATEID=108621:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_135C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:29:4.8:82.5,4.8,0:26:0:-83.85:83.85
2	122612412	108622:1	A	]2:122613125]A	35	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=108622:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:122612412(-)-2:122613125(+)__2_122598001_122623001D;SPAN=713;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:39:35.3:35.3,0,61.7:0:14:-35.25:35.68
2	122612418	108624:1	G	G[2:122612766[	44	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=108624:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_26C;SPAN=348;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:31:31.1:44.3,0,31.1:16:0:-44.17:44.17
2	122612766	108624:2	T	]2:122612418]T	44	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=108624:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_26C;SPAN=348;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:31:31.1:44.3,0,31.1:16:0:-44.17:44.17
2	122613125	108622:2	A	A[2:122612412[	35	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=108622:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:122612412(-)-2:122613125(+)__2_122598001_122623001D;SPAN=713;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:39:35.3:35.3,0,61.7:0:14:-35.25:35.68
2	122719026	108679:1	G	[2:122724930[G	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=108679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122720501_122745501_3C;SPAN=5904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:19:5.7:62.7,5.7,0:12:16:-62.72:62.72
2	122724930	108679:2	T	[2:122719026[T	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=108679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122720501_122745501_3C;SPAN=5904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:19:5.7:62.7,5.7,0:12:16:-62.72:62.72
2	124294183	109318:1	T	[2:124295338[T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAGG;MAPQ=60;MATEID=109318:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_124288501_124313501_27C;SPAN=1155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:45:12.6:138.6,12.6,0:32:18:-138.6:138.6
2	124295338	109318:2	C	[2:124294183[C	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=GTAGG;MAPQ=60;MATEID=109318:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_124288501_124313501_27C;SPAN=1155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:45:12.6:138.6,12.6,0:32:18:-138.6:138.6
2	125008984	109599:1	C	C[2:125010671[	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=109599:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_2_124999001_125024001_30C;SPAN=1687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:38:50:12.5:111.5,0,12.5:38:0:-115.7:115.7
2	125008985	109602:1	A	]2:125010824]A	99	PASS	EVDNC=ASSMB;INSERTION=TCTATACTCACTACTACACTAT;MAPQ=60;MATEID=109602:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_124999001_125024001_27C;SPAN=1839;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:36:13.8:151.8,13.8,0:50:0:-151.8:151.8
2	125010671	109599:2	C	]2:125008984]C	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=109599:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_2_124999001_125024001_30C;SPAN=1687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:38:50:12.5:111.5,0,12.5:38:0:-115.7:115.7
2	125010824	109602:2	C	C[2:125008985[	99	PASS	EVDNC=ASSMB;INSERTION=TCTATACTCACTACTACACTAT;MAPQ=60;MATEID=109602:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_124999001_125024001_27C;SPAN=1839;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:36:13.8:151.8,13.8,0:50:0:-151.8:151.8
2	125013432	471947:1	A	[8:117667362[A	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAATAAAAT;MAPQ=60;MATEID=471947:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_117649001_117674001_5C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:26:8.4:92.4,8.4,0:27:7:-92.42:92.42
2	125276952	109688:1	A	]2:125284312]A	24	PASS	DISC_MAPQ=32;EVDNC=ASDIS;MAPQ=60;MATEID=109688:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_125268501_125293501_20C;SPAN=7360;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:42:24.5:24.5,0,80.6:9:7:-24.51:26.21
2	125284312	109688:2	T	T[2:125276952[	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=109688:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_125268501_125293501_20C;SPAN=7360;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:42:24.5:24.5,0,80.6:9:7:-24.51:26.21
2	125685674	109860:1	C	C[2:125694255[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAAC;MAPQ=60;MATEID=109860:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_125660501_125685501_31C;SPAN=8581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:0:11.7:128.7,11.7,0:30:17:-128.7:128.7
2	125694255	109860:2	T	]2:125685674]T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TAAC;MAPQ=60;MATEID=109860:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_125660501_125685501_31C;SPAN=8581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:0:11.7:128.7,11.7,0:30:17:-128.7:128.7
2	125852537	109909:1	G	G[2:125866487[	28	PASS	EVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=109909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_125856501_125881501_11C;SPAN=13950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
2	125866487	109909:2	T	]2:125852537]T	28	PASS	EVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=109909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_125856501_125881501_11C;SPAN=13950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
2	126315750	989664:1	G	]Un_KN707841v1_decoy:8992]G	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=989664:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_692_1_8992_0C;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:11:0:-33.01:33.01
2	126315751	110043:1	T	T[Un_KN707841v1_decoy:1[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=110043:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_126297501_126322501_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:23:10.1:46.4,0,10.1:16:0:-47.52:47.52
2	126917182	110225:1	C	C[2:126919697[	51	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=110225:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_126910001_126935001_60C;SPAN=2515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:27:15.5:51.8,0,15.5:18:0:-52.86:52.86
2	126919697	110225:2	T	]2:126917182]T	51	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=110225:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_126910001_126935001_60C;SPAN=2515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:27:15.5:51.8,0,15.5:18:0:-52.86:52.86
2	127188819	110351:1	A	]2:127316157]A	56	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=110351:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:127188819(-)-2:127316157(+)__2_127302001_127327001D;SPAN=127338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:21:2.4:56.1,2.4,0:0:18:-57:57
2	127316157	110351:2	T	T[2:127188819[	56	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=110351:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:127188819(-)-2:127316157(+)__2_127302001_127327001D;SPAN=127338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:21:2.4:56.1,2.4,0:0:18:-57:57
2	128082406	110651:1	C	C[3:185432358[	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTGTGTTTTTAGTAGAGACAGGGTTTCAC;MAPQ=60;MATEID=110651:2;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_2_128061501_128086501_81C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:13:6:66,6,0:18:9:-66.02:66.02
2	128792240	110897:1	C	]2:128792506]C	9	PASS	DISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=CACAGTGTCTCACACACACATCCACACA;MAPQ=60;MATEID=110897:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_2_128772001_128797001_8C;SPAN=266;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:48:9.8:9.8,0,108.8:5:2:-9.615:14.68
2	128792369	110900:1	C	C[2:128792446[	18	PASS	EVDNC=ASSMB;INSERTION=GCACAGTGTCTCA;MAPQ=33;MATEID=110900:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_2_128772001_128797001_44C;SPAN=77;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:10:0:-18.67:22.39
2	128792402	110902:1	A	A[2:128792446[	6	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CACACACATGCACACACA;MAPQ=45;MATEID=110902:2;MATENM=7;NM=5;NUMPARTS=3;REPSEQ=ACACACAC;SCTG=c_2_128772001_128797001_60C;SPAN=44;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:6:6,0,59.8:10:0:-5.664:9.489
2	128792446	110900:2	C	]2:128792369]C	18	PASS	EVDNC=ASSMB;INSERTION=GCACAGTGTCTCA;MAPQ=60;MATEID=110900:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_2_128772001_128797001_44C;SPAN=77;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:10:0:-18.67:22.39
2	128792446	110902:2	C	]2:128792402]C	6	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CACACACATGCACACACA;MAPQ=60;MATEID=110902:1;MATENM=5;NM=7;NUMPARTS=3;REPSEQ=ACACACAC;SCTG=c_2_128772001_128797001_60C;SPAN=44;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:6:6,0,59.8:10:0:-5.664:9.489
2	128792446	110905:1	C	]2:128792506]C	53	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACACACATGCACACACA;INSERTION=CAGTGTCTCTCACAAAGACCTCTCACACACACACATCCACACACATGCACAGTGTCACACACATCTCACACACGCACACAGTGTCA;MAPQ=60;MATEID=110905:2;MATENM=3;NM=7;NUMPARTS=3;SCTG=c_2_128772001_128797001_60C;SPAN=60;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:45:53.3:53.3,0,59.9:20:0:-53.37:53.39
2	128792506	110897:2	A	A[2:128792240[	9	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGTGTCTCACACACACATCCACACA;MAPQ=60;MATEID=110897:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_2_128772001_128797001_8C;SPAN=266;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:48:9.8:9.8,0,108.8:5:2:-9.615:14.68
2	128792506	110905:2	A	A[2:128792446[	53	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACACACATGCACACACA;INSERTION=CAGTGTCTCTCACAAAGACCTCTCACACACACACATCCACACACATGCACAGTGTCACACACATCTCACACACGCACACAGTGTCA;MAPQ=60;MATEID=110905:1;MATENM=7;NM=3;NUMPARTS=3;SCTG=c_2_128772001_128797001_60C;SPAN=60;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:45:53.3:53.3,0,59.9:20:0:-53.37:53.39
2	128927599	110968:1	A	[2:128928241[A	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=110968:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_128919001_128944001_113C;SPAN=642;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:49:39.2:39.2,0,82.1:13:6:-39.04:39.96
2	128928241	110968:2	T	[2:128927599[T	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=110968:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_128919001_128944001_113C;SPAN=642;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:49:39.2:39.2,0,82.1:13:6:-39.04:39.96
2	128946262	110984:1	G	G]2:128964689]	42	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=110984:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:128946262(+)-2:128964689(+)__2_128943501_128968501D;SPAN=18427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:37:42.5:42.5,0,49.1:0:16:-42.42:42.46
2	128964689	110984:2	T	T]2:128946262]	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=110984:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:128946262(+)-2:128964689(+)__2_128943501_128968501D;SPAN=18427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:37:42.5:42.5,0,49.1:0:16:-42.42:42.46
2	130185786	111787:1	T	[2:131488904[T	32	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=111787:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:130185786(-)-2:131488904(-)__2_131467001_131492001D;SPAN=1303118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
2	130197366	111380:1	A	A[2:130199831[	45	PASS	EVDNC=ASSMB;HOMSEQ=CACACCTGTA;MAPQ=60;MATEID=111380:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_130193001_130218001_124C;SPAN=2465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05
2	130199831	111380:2	C	]2:130197366]C	45	PASS	EVDNC=ASSMB;HOMSEQ=CACACCTGTA;MAPQ=60;MATEID=111380:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_130193001_130218001_124C;SPAN=2465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05
2	130208252	111774:1	G	G]2:131464145]	49	PASS	DISC_MAPQ=0;EVDNC=ASDIS;INSERTION=GACAT;MAPQ=33;MATEID=111774:2;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_2_131442501_131467501_12C;SPAN=1255893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:11:4:-48.04:48.04
2	130210907	511441:1	A	]9:111642641]A	42	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=511441:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_111622001_111647001_71C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:15:2:-43.34:43.34
2	131129004	111642:1	T	[2:131129734[T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=TT;MAPQ=60;MATEID=111642:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_131124001_131149001_16C;SPAN=730;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:45:12.6:138.6,12.6,0:44:19:-138.6:138.6
2	131129734	111642:2	C	[2:131129004[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TT;MAPQ=60;MATEID=111642:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_131124001_131149001_16C;SPAN=730;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:45:12.6:138.6,12.6,0:44:19:-138.6:138.6
2	131464145	111774:2	A	A]2:130208252]	49	PASS	DISC_MAPQ=14;EVDNC=ASDIS;INSERTION=GACAT;MAPQ=40;MATEID=111774:1;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_2_131442501_131467501_12C;SPAN=1255893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:11:4:-48.04:48.04
2	131488904	111787:2	A	[2:130185786[A	32	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=111787:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:130185786(-)-2:131488904(-)__2_131467001_131492001D;SPAN=1303118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
2	131777353	112018:1	A	[2:131821297[A	52	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=112018:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:131777353(-)-2:131821297(-)__2_131810001_131835001D;SPAN=43944;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:0:17:-52.81:52.81
2	131777354	111989:1	A	[2:131821781[A	99	PASS	DISC_MAPQ=27;EVDNC=ASDIS;HOMSEQ=GCT;MAPQ=60;MATEID=111989:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_2_131761001_131786001_0C;SPAN=44427;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:9:12.6:138.6,12.6,0:35:20:-138.6:138.6
2	131821297	112018:2	G	[2:131777353[G	52	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=112018:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:131777353(-)-2:131821297(-)__2_131810001_131835001D;SPAN=43944;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:0:17:-52.81:52.81
2	131821781	111989:2	G	[2:131777354[G	99	PASS	DISC_MAPQ=25;EVDNC=ASDIS;HOMSEQ=GCT;MAPQ=60;MATEID=111989:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_2_131761001_131786001_0C;SPAN=44427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:9:12.6:138.6,12.6,0:35:20:-138.6:138.6
2	132243814	112281:1	T	[14:18223617[T	95	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=112281:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132243814(-)-14:18223617(-)__2_132226501_132251501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:29:8.7:95.7,8.7,0:0:32:-95.72:95.72
2	132270852	875478:1	G	G[20:30502676[	59	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=875478:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132270852(+)-20:30502676(-)__20_30502501_30527501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:0:18:-58.15:58.15
2	132544930	112605:1	C	]2:132883250]C	15	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CATG;MAPQ=60;MATEID=112605:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132863501_132888501_16C;SPAN=338320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:4:4:-15.03:15.24
2	132883250	112605:2	G	G[2:132544930[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CATG;MAPQ=60;MATEID=112605:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132863501_132888501_16C;SPAN=338320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:4:4:-15.03:15.24
2	133005391	112633:1	C	C[2:133006981[	20	PASS	EVDNC=ASSMB;INSERTION=AAACAACAAAAAATTATT;MAPQ=60;MATEID=112633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132986001_133011001_15C;SPAN=1590;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63
2	133006981	112633:2	T	]2:133005391]T	20	PASS	EVDNC=ASSMB;INSERTION=AAACAACAAAAAATTATT;MAPQ=60;MATEID=112633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132986001_133011001_15C;SPAN=1590;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63
2	133212138	112700:1	G	]2:133287509]G	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=112700:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_133280001_133305001_15C;SPAN=75371;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:7:2:-19.38:19.89
2	133287509	112700:2	A	A[2:133212138[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=112700:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_133280001_133305001_15C;SPAN=75371;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:7:2:-19.38:19.89
2	133702708	112810:1	T	T[2:133703001[	95	PASS	EVDNC=ASSMB;HOMSEQ=CTCGTCTCTTTTTCT;MAPQ=60;MATEID=112810:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_133696501_133721501_7C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:18:8.7:95.7,8.7,0:32:0:-95.72:95.72
2	133703001	112810:2	C	]2:133702708]C	95	PASS	EVDNC=ASSMB;HOMSEQ=CTCGTCTCTTTTTCT;MAPQ=60;MATEID=112810:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_133696501_133721501_7C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:18:8.7:95.7,8.7,0:32:0:-95.72:95.72
2	133786720	112839:1	A	A[2:133787036[	37	PASS	EVDNC=ASSMB;HOMSEQ=AAATAATTGATGATTTA;MAPQ=60;MATEID=112839:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_133770001_133795001_54C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:55:37.4:37.4,0,100.1:16:0:-37.36:38.98
2	133787036	112839:2	A	]2:133786720]A	37	PASS	EVDNC=ASSMB;HOMSEQ=AAATAATTGATGATTTA;MAPQ=60;MATEID=112839:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_133770001_133795001_54C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:55:37.4:37.4,0,100.1:16:0:-37.36:38.98
2	134209146	112961:1	T	T[2:134212560[	29	PASS	EVDNC=ASSMB;HOMSEQ=AGAACTGGCTTATTTTT;MAPQ=60;MATEID=112961:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134211001_134236001_46C;SPAN=3414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08
2	134212560	112961:2	A	]2:134209146]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AGAACTGGCTTATTTTT;MAPQ=60;MATEID=112961:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134211001_134236001_46C;SPAN=3414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08
2	134524328	113044:1	G	G[2:134525016[	53	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=113044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134505001_134530001_4C;SPAN=688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:34:30.2:53.3,0,30.2:19:0:-53.43:53.43
2	134525016	113044:2	G	]2:134524328]G	53	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=113044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134505001_134530001_4C;SPAN=688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:34:30.2:53.3,0,30.2:19:0:-53.43:53.43
2	134921604	113147:1	T	T[2:134923614[	13	PASS	EVDNC=ASSMB;HOMSEQ=GCCT;MAPQ=60;MATEID=113147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134921501_134946501_50C;SPAN=2010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:46:13.7:13.7,0,99.5:8:0:-13.48:17.45
2	134923614	113147:2	G	]2:134921604]G	13	PASS	EVDNC=ASSMB;HOMSEQ=GCCT;MAPQ=60;MATEID=113147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134921501_134946501_50C;SPAN=2010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:46:13.7:13.7,0,99.5:8:0:-13.48:17.45
2	137225736	113732:1	T	T[2:137226890[	48	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=113732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_137224501_137249501_17C;SPAN=1154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:27:18.8:48.5,0,18.8:17:0:-49.21:49.21
2	137226890	113732:2	A	]2:137225736]A	48	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=113732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_137224501_137249501_17C;SPAN=1154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:27:18.8:48.5,0,18.8:17:0:-49.21:49.21
2	138199265	114138:1	A	]2:138199333]A	33	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=114138:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_138180001_138205001_40C;SPAN=68;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:35:33.2:33.2,0,53:13:0:-33.08:33.38
2	138199333	114138:2	A	A[2:138199265[	33	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=114138:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_138180001_138205001_40C;SPAN=68;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:35:33.2:33.2,0,53:13:0:-33.08:33.38
2	140883094	115249:1	C	]2:140942060]C	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAGAAT;MAPQ=60;MATEID=115249:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_140924001_140949001_4C;SPAN=58966;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:8:12:-47.02:47.02
2	140942060	115249:2	A	A[2:140883094[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAGAAT;MAPQ=60;MATEID=115249:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_140924001_140949001_4C;SPAN=58966;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:8:12:-47.02:47.02
2	141095450	115326:2	A	A]1:118858672]	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=115326:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:118858672(+)-2:141095450(+)__2_141071001_141096001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91
2	141141086	115406:1	T	T[2:141224396[	39	PASS	EVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=115406:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_141218001_141243001_34C;SPAN=83310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
2	141211129	115452:1	A	A[2:141354574[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=115452:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_141340501_141365501_3C;SPAN=143445;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:5:4:-21.93:21.93
2	141224396	115406:2	A	]2:141141086]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=115406:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_141218001_141243001_34C;SPAN=83310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
2	141354574	115452:2	A	]2:141211129]A	22	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=115452:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_141340501_141365501_3C;SPAN=143445;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:5:4:-21.93:21.93
2	142677053	115964:1	T	T[2:142677375[	48	PASS	EVDNC=ASSMB;HOMSEQ=CAAAGCTTTCATTTTTT;MAPQ=60;MATEID=115964:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_142663501_142688501_29C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:62:48.8:48.8,0,104.9:20:0:-48.59:49.82
2	142677375	115964:2	C	]2:142677053]C	48	PASS	EVDNC=ASSMB;HOMSEQ=CAAAGCTTTCATTTTTT;MAPQ=60;MATEID=115964:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_142663501_142688501_29C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:62:48.8:48.8,0,104.9:20:0:-48.59:49.82
2	143253785	835731:1	A	A]18:71950157]	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=835731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:143253785(+)-18:71950157(+)__18_71932001_71957001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:6:3.3:36.3,3.3,0:0:12:-36.31:36.31
2	144160369	116411:1	A	]2:144160541]A	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=116411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_144158001_144183001_13C;SPAN=172;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:38:19.1:19.1,0,75.2:9:0:-19.03:20.99
2	144160541	116411:2	C	C[2:144160369[	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=116411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_144158001_144183001_13C;SPAN=172;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:38:19.1:19.1,0,75.2:9:0:-19.03:20.99
2	144833448	116606:1	T	T[2:144835123[	17	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=116606:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:144833448(+)-2:144835123(-)__2_144819501_144844501D;SPAN=1675;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63
2	144835123	116606:2	G	]2:144833448]G	17	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=116606:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:144833448(+)-2:144835123(-)__2_144819501_144844501D;SPAN=1675;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63
2	145668177	116850:1	A	]2:145716276]A	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=116850:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_145701501_145726501_17C;SPAN=48099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:23:23.3:33.2,0,23.3:10:9:-33.21:33.21
2	145716276	116850:2	T	T[2:145668177[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=116850:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_145701501_145726501_17C;SPAN=48099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:23:23.3:33.2,0,23.3:10:9:-33.21:33.21
2	146105053	117026:1	T	T[2:146119295[	35	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=117026:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_146118001_146143001_26C;SPAN=14242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
2	146119295	117026:2	G	]2:146105053]G	35	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=117026:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_146118001_146143001_26C;SPAN=14242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
2	148379770	117653:1	A	]2:148427543]A	31	PASS	DISC_MAPQ=48;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=117653:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_148372001_148397001_19C;SPAN=47773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:11:8:-31.74:31.78
2	148427543	117653:2	A	A[2:148379770[	31	PASS	DISC_MAPQ=36;EVDNC=ASDIS;INSERTION=T;MAPQ=47;MATEID=117653:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_148372001_148397001_19C;SPAN=47773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:11:8:-31.74:31.78
2	150174624	118294:1	T	T[2:150181733[	99	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=118294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_150160501_150185501_19C;SPAN=7109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:39:4.2:105.6,4.2,0:34:0:-108.4:108.4
2	150181733	118294:2	G	]2:150174624]G	99	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=118294:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_150160501_150185501_19C;SPAN=7109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:39:4.2:105.6,4.2,0:34:0:-108.4:108.4
2	151184691	118701:1	T	T[2:151184979[	44	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=118701:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_151165001_151190001_57C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:55:44:44,0,93.5:18:0:-43.96:44.97
2	151184979	118701:2	T	]2:151184691]T	44	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=118701:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_151165001_151190001_57C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:55:44:44,0,93.5:18:0:-43.96:44.97
2	154039258	119963:1	G	G[2:154042666[	65	PASS	EVDNC=ASSMB;INSERTION=GATT;MAPQ=60;MATEID=119963:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_154031501_154056501_62C;SPAN=3408;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:61:65.6:65.6,0,85.4:25:0:-65.38:65.57
2	154042666	119963:2	A	]2:154039258]A	65	PASS	EVDNC=ASSMB;INSERTION=GATT;MAPQ=60;MATEID=119963:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_154031501_154056501_62C;SPAN=3408;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:61:65.6:65.6,0,85.4:25:0:-65.38:65.57
2	154150374	125028:1	T	[2:166690583[T	99	PASS	DISC_MAPQ=19;EVDNC=ASDIS;INSERTION=A;MAPQ=47;MATEID=125028:2;MATENM=10;NM=0;NUMPARTS=2;SCTG=c_2_166673501_166698501_5C;SPAN=12540209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:69:21:19.2:211.2,19.2,0:64:17:-211.3:211.3
2	155019728	120494:1	A	]2:155343836]A	34	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=120494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155330001_155355001_14C;SPAN=324108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:9:10:-34.2:34.27
2	155034681	120386:1	T	T[2:155034983[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGCTGTTACTTTTT;MAPQ=60;MATEID=120386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155011501_155036501_107C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:59:9.8:138.5,0,9.8:41:12:-145.2:145.2
2	155034983	120386:2	C	]2:155034681]C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGCTGTTACTTTTT;MAPQ=60;MATEID=120386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155011501_155036501_107C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:59:9.8:138.5,0,9.8:41:12:-145.2:145.2
2	155343836	120494:2	G	G[2:155019728[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=120494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155330001_155355001_14C;SPAN=324108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:9:10:-34.2:34.27
2	157171629	940773:1	A	]X:105542844]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAT;MAPQ=60;MATEID=940773:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_105521501_105546501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
2	157576837	121345:1	T	T[2:157577155[	99	PASS	EVDNC=ASSMB;HOMSEQ=TGAAATTTTCTT;MAPQ=60;MATEID=121345:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_157559501_157584501_73C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:44:12.3:135.3,12.3,0:43:0:-135.3:135.3
2	157577155	121345:2	T	]2:157576837]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TGAAATTTTCTT;MAPQ=60;MATEID=121345:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_157559501_157584501_73C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:44:12.3:135.3,12.3,0:43:0:-135.3:135.3
2	158805484	121844:1	C	C[2:158806361[	60	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=121844:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_158784501_158809501_18C;SPAN=877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:55:60.5:60.5,0,77:23:0:-60.46:60.59
2	158806361	121844:2	G	]2:158805484]G	60	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=121844:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_158784501_158809501_18C;SPAN=877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:55:60.5:60.5,0,77:23:0:-60.46:60.59
2	159292615	122074:1	C	C[2:159295138[	99	PASS	EVDNC=ASSMB;HOMSEQ=TAGAATTTC;MAPQ=60;MATEID=122074:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_159274501_159299501_119C;SPAN=2523;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114
2	159295138	122074:2	T	]2:159292615]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TAGAATTTC;MAPQ=60;MATEID=122074:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_159274501_159299501_119C;SPAN=2523;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114
2	161095746	122996:2	C	C]1:32790315]	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=122996:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:32790315(+)-2:161095746(+)__2_161087501_161112501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
2	161386035	123118:1	A	A[2:161388256[	16	PASS	EVDNC=ASSMB;HOMSEQ=AAAA;MAPQ=60;MATEID=123118:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_161381501_161406501_28C;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77
2	161388256	123118:2	A	]2:161386035]A	16	PASS	EVDNC=ASSMB;HOMSEQ=AAAA;MAPQ=60;MATEID=123118:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_161381501_161406501_28C;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77
2	161475875	123145:1	C	C[2:161477530[	99	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=123145:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:161475875(+)-2:161477530(-)__2_161455001_161480001D;SPAN=1655;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:77:15:21.3:234.3,21.3,0:0:77:-234.4:234.4
2	161477530	123145:2	G	]2:161475875]G	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=123145:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:161475875(+)-2:161477530(-)__2_161455001_161480001D;SPAN=1655;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:77:15:21.3:234.3,21.3,0:0:77:-234.4:234.4
2	162753054	123497:1	C	C]9:24546560]	17	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=123497:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:162753054(+)-9:24546560(+)__2_162729001_162754001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63
2	165158185	124267:1	G	G[2:165160235[	67	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=124267:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_165154501_165179501_143C;SPAN=2050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07
2	165160235	124267:2	T	]2:165158185]T	67	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=124267:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_165154501_165179501_143C;SPAN=2050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07
2	165411013	124385:1	C	C[2:165411322[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCTCCAGACCC;MAPQ=60;MATEID=124385:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_165399501_165424501_116C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7
2	165411322	124385:2	A	]2:165411013]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCTCCAGACCC;MAPQ=60;MATEID=124385:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_165399501_165424501_116C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7
2	166689462	125038:1	A	A[2:166690576[	82	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=125038:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:166689462(+)-2:166690576(-)__2_166673501_166698501D;SPAN=1114;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:16:7.5:82.5,7.5,0:0:27:-82.52:82.52
2	166690576	125038:2	T	]2:166689462]T	82	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=125038:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:166689462(+)-2:166690576(-)__2_166673501_166698501D;SPAN=1114;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:16:7.5:82.5,7.5,0:0:27:-82.52:82.52
2	166690583	125028:2	A	[2:154150374[A	99	PASS	DISC_MAPQ=42;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=125028:1;MATENM=0;NM=10;NUMPARTS=2;SCTG=c_2_166673501_166698501_5C;SPAN=12540209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:69:21:19.2:211.2,19.2,0:64:17:-211.3:211.3
2	168039311	125455:1	G	G[2:168039617[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAGCAGATCAG;MAPQ=60;MATEID=125455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_168021001_168046001_91C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:39:10.8:118.8,10.8,0:38:0:-118.8:118.8
2	168039617	125455:2	A	]2:168039311]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAGCAGATCAG;MAPQ=60;MATEID=125455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_168021001_168046001_91C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:39:10.8:118.8,10.8,0:38:0:-118.8:118.8
2	169004595	135835:1	C	C[2:194709245[	27	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=135835:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_194701501_194726501_15C;SPAN=25704650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
2	169248623	125952:1	A	A[2:169254653[	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAACAGCAATGTTGA;MAPQ=60;MATEID=125952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_169246001_169271001_139C;SPAN=6030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:37:39.2:52.4,0,39.2:19:0:-52.39:52.39
2	169254653	125952:2	A	]2:169248623]A	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAACAGCAATGTTGA;MAPQ=60;MATEID=125952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_169246001_169271001_139C;SPAN=6030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:37:39.2:52.4,0,39.2:19:0:-52.39:52.39
2	169785008	126220:1	C	C[2:169787442[	82	PASS	EVDNC=ASSMB;HOMSEQ=TCATTATTTTC;MAPQ=60;MATEID=126220:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_169785001_169810001_42C;SPAN=2434;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:25:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	169787442	126220:2	T	]2:169785008]T	82	PASS	EVDNC=ASSMB;HOMSEQ=TCATTATTTTC;MAPQ=60;MATEID=126220:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_169785001_169810001_42C;SPAN=2434;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:25:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	171438928	126956:1	C	C[12:104125233[	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TCAGTC;MAPQ=60;MATEID=126956:2;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_2_171426501_171451501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:30:12.9:141.9,12.9,0:46:9:-141.9:141.9
2	171976067	127221:1	A	[Un_JTFH01001495v1_decoy:1[A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=127221:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_171965501_171990501_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:27:12.6:138.6,12.6,0:45:0:-138.6:138.6
2	171976069	987138:1	C	C[Un_KN707623v1_decoy:1[	75	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=987138:2;MATENM=2;NM=0;NUMPARTS=7;REPSEQ=CGACGA;SCTG=c_474_1_3784_1C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:10:8.6:75.4,8.6,0:32:0:-75.43:75.43
2	172041326	127279:1	G	G[2:172045508[	59	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAAATTAGCCGGGCGTGGTGG;MAPQ=60;MATEID=127279:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_172039001_172064001_63C;SPAN=4182;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:12:11:-59.41:59.41
2	172045508	127279:2	A	]2:172041326]A	59	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AAAATTAGCCGGGCGTGGTGG;MAPQ=60;MATEID=127279:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_172039001_172064001_63C;SPAN=4182;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:12:11:-59.41:59.41
2	172139606	127333:1	T	T[2:172142746[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=127333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:172139606(+)-2:172142746(-)__2_172137001_172162001D;SPAN=3140;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23
2	172142746	127333:2	A	]2:172139606]A	21	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=127333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:172139606(+)-2:172142746(-)__2_172137001_172162001D;SPAN=3140;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23
2	173287016	127742:1	T	T[2:173287318[	51	PASS	EVDNC=ASSMB;HOMSEQ=CTCTTTAACTTTTT;MAPQ=60;MATEID=127742:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_2_173264001_173289001_76C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
2	173287318	127742:2	C	]2:173287016]C	51	PASS	EVDNC=ASSMB;HOMSEQ=CTCTTTAACTTTTT;MAPQ=60;MATEID=127742:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_2_173264001_173289001_76C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
2	176400917	128762:1	T	T[2:176407313[	99	PASS	EVDNC=ASSMB;HOMSEQ=TATT;MAPQ=60;MATEID=128762:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_176400001_176425001_18C;SPAN=6396;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:22:9.6:105.6,9.6,0:35:0:-105.6:105.6
2	176407313	128762:2	T	]2:176400917]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TATT;MAPQ=60;MATEID=128762:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_176400001_176425001_18C;SPAN=6396;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:22:9.6:105.6,9.6,0:35:0:-105.6:105.6
2	177252359	129060:1	A	A[2:177259301[	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=129060:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:177252359(+)-2:177259301(-)__2_177257501_177282501D;SPAN=6942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
2	177259301	129060:2	C	]2:177252359]C	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=129060:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:177252359(+)-2:177259301(-)__2_177257501_177282501D;SPAN=6942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
2	177422909	129133:1	C	C[2:177423334[	99	PASS	EVDNC=ASSMB;INSERTION=AGCCAAACAG;MAPQ=60;MATEID=129133:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_177404501_177429501_28C;SPAN=425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:38:7.2:108.9,7.2,0:34:0:-109.6:109.6
2	177423334	129133:2	T	]2:177422909]T	99	PASS	EVDNC=ASSMB;INSERTION=AGCCAAACAG;MAPQ=60;MATEID=129133:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_177404501_177429501_28C;SPAN=425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:38:7.2:108.9,7.2,0:34:0:-109.6:109.6
2	178826569	129781:1	T	]2:178874593]T	29	PASS	EVDNC=ASSMB;INSERTION=AGTTGTTTCCAACTGCTTTGCAG;MAPQ=60;MATEID=129781:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178874501_178899501_47C;SPAN=48024;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
2	178838895	129763:1	A	A[2:178839864[	92	PASS	EVDNC=ASSMB;INSERTION=TGAAAGTA;MAPQ=60;MATEID=129763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178825501_178850501_1C;SPAN=969;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:37:0.3:92.4,0.3,0:31:0:-97.36:97.36
2	178839864	129763:2	C	]2:178838895]C	92	PASS	EVDNC=ASSMB;INSERTION=TGAAAGTA;MAPQ=60;MATEID=129763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178825501_178850501_1C;SPAN=969;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:37:0.3:92.4,0.3,0:31:0:-97.36:97.36
2	178874593	129781:2	C	C[2:178826569[	29	PASS	EVDNC=ASSMB;INSERTION=AGTTGTTTCCAACTGCTTTGCAG;MAPQ=60;MATEID=129781:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178874501_178899501_47C;SPAN=48024;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
2	181061110	130693:1	T	T[2:181061423[	85	PASS	EVDNC=ASSMB;HOMSEQ=GACCACTTCT;MAPQ=60;MATEID=130693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_181055001_181080001_61C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82
2	181061423	130693:2	G	]2:181061110]G	85	PASS	EVDNC=ASSMB;HOMSEQ=GACCACTTCT;MAPQ=60;MATEID=130693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_181055001_181080001_61C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82
2	182289080	131078:1	C	]2:182289280]C	26	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=131078:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_182280001_182305001_6C;SPAN=200;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:58:26.6:26.6,0,119:13:0:-26.61:29.96
2	182289280	131078:2	T	T[2:182289080[	26	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=131078:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_182280001_182305001_6C;SPAN=200;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:58:26.6:26.6,0,119:13:0:-26.61:29.96
2	183929705	131661:1	A	A[2:183939304[	99	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=131661:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_183921501_183946501_80C;SPAN=9599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:37:3.6:99,3.6,0:32:0:-101.7:101.7
2	183939304	131661:2	G	]2:183929705]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=131661:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_183921501_183946501_80C;SPAN=9599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:37:3.6:99,3.6,0:32:0:-101.7:101.7
2	186472273	132612:1	T	T[2:186473340[	31	PASS	EVDNC=ASSMB;INSERTION=CCCCATGGTCTCCCTCTCCCTCTTTCCATGGTCTCCC;MAPQ=60;MATEID=132612:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_186469501_186494501_55C;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
2	186473340	132612:2	G	]2:186472273]G	31	PASS	EVDNC=ASSMB;INSERTION=CCCCATGGTCTCCCTCTCCCTCTTTCCATGGTCTCCC;MAPQ=60;MATEID=132612:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_186469501_186494501_55C;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
2	187785173	133134:1	G	]2:194591082]G	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGC;MAPQ=60;MATEID=133134:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_187768001_187793001_76C;SPAN=6805909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:20:8.4:92.4,8.4,0:26:6:-92.42:92.42
2	189753180	133859:1	C	C[2:189765979[	85	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=133859:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_189752501_189777501_15C;SPAN=12799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:37:6.2:85.4,0,6.2:29:0:-89.11:89.11
2	189765979	133859:2	A	]2:189753180]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=39;MATEID=133859:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_189752501_189777501_15C;SPAN=12799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:37:6.2:85.4,0,6.2:29:0:-89.11:89.11
2	191154732	134413:1	C	]2:191154907]C	41	PASS	EVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=134413:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191149001_191174001_96C;SPAN=175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:76:41.6:41.6,0,147.2:19:0:-41.36:44.82
2	191154907	134413:2	T	T[2:191154732[	41	PASS	EVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=134413:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191149001_191174001_96C;SPAN=175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:76:41.6:41.6,0,147.2:19:0:-41.36:44.82
2	191834730	134685:1	T	]2:191863633]T	75	PASS	EVDNC=ASSMB;INSERTION=TAAT;MAPQ=60;MATEID=134685:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191859501_191884501_27C;SPAN=28903;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:36:13.1:75.8,0,13.1:26:0:-78.01:78.01
2	191863633	134685:2	T	T[2:191834730[	75	PASS	EVDNC=ASSMB;INSERTION=TAAT;MAPQ=60;MATEID=134685:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191859501_191884501_27C;SPAN=28903;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:36:13.1:75.8,0,13.1:26:0:-78.01:78.01
2	193213246	135182:1	C	[11:25101793[C	85	PASS	DISC_MAPQ=3;EVDNC=ASDIS;MAPQ=11;MATEID=135182:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_193207001_193232001_9C;SPAN=-1;SUBN=10;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:25:7:-85.82:85.82
2	193680440	702567:1	T	T[14:64980572[	44	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702567:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:193680440(+)-14:64980572(-)__14_64974001_64999001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:31:31.1:44.3,0,31.1:0:16:-44.17:44.17
2	193824778	135427:1	G	G[2:193834042[	99	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=135427:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_2_193819501_193844501_3C;SPAN=9264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:21:12.9:141.9,12.9,0:47:0:-141.9:141.9
2	193834042	135427:2	G	]2:193824778]G	99	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=135427:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_2_193819501_193844501_3C;SPAN=9264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:21:12.9:141.9,12.9,0:47:0:-141.9:141.9
2	194591082	133134:2	C	C[2:187785173[	92	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGC;MAPQ=60;MATEID=133134:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_187768001_187793001_76C;SPAN=6805909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:20:8.4:92.4,8.4,0:26:6:-92.42:92.42
2	194709245	135835:2	C	]2:169004595]C	27	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=135835:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_194701501_194726501_15C;SPAN=25704650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
2	195871703	136348:1	A	A[2:195871967[	42	PASS	EVDNC=ASSMB;HOMSEQ=AAACTACTTAAGGGAA;MAPQ=60;MATEID=136348:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_195853001_195878001_3C;SPAN=264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:36:42.8:42.8,0,46.1:16:0:-42.7:42.71
2	195871967	136348:2	A	]2:195871703]A	42	PASS	EVDNC=ASSMB;HOMSEQ=AAACTACTTAAGGGAA;MAPQ=60;MATEID=136348:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_195853001_195878001_3C;SPAN=264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:36:42.8:42.8,0,46.1:16:0:-42.7:42.71
2	198602574	13050:2	T	T]1:53954555]	16	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=13050:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_99C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:94:16.7:16.7,0,218:11:5:-16.49:26.94
2	200330213	137704:1	C	C[2:200330215[	99	PASS	EVDNC=ASSMB;INSERTION=TGTTATTGTTAATCAGTATTGGTATTTGAATAGGGATATCCAAAGTATTTGCTGAACAGAAAGCATGTTGTTTTAGGTCCATATTTTCCCTGAAAGTATTTTTATTATTATCATTTTTAAAATTTTTCCCTCCAATGGTCTTATTTAAATTAATTTACTTAACAAGCCGTATATTCCTTGTGG;MAPQ=60;MATEID=137704:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_200312001_200337001_67C;SPAN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:46:15:165,15,0:54:0:-165:165
2	200330215	137704:2	A	]2:200330213]A	99	PASS	EVDNC=ASSMB;INSERTION=TGTTATTGTTAATCAGTATTGGTATTTGAATAGGGATATCCAAAGTATTTGCTGAACAGAAAGCATGTTGTTTTAGGTCCATATTTTCCCTGAAAGTATTTTTATTATTATCATTTTTAAAATTTTTCCCTCCAATGGTCTTATTTAAATTAATTTACTTAACAAGCCGTATATTCCTTGTGG;MAPQ=60;MATEID=137704:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_200312001_200337001_67C;SPAN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:46:15:165,15,0:54:0:-165:165
2	200892641	137952:1	T	]2:200999744]T	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=137952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_200998001_201023001_37C;SPAN=107103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:14:6.3:69.3,6.3,0:19:16:-69.32:69.32
2	200999744	137952:2	T	T[2:200892641[	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=137952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_200998001_201023001_37C;SPAN=107103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:14:6.3:69.3,6.3,0:19:16:-69.32:69.32
2	201224090	138022:1	G	G]2:201224836]	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=138022:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:201224090(+)-2:201224836(+)__2_201218501_201243501D;SPAN=746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59
2	201224836	138022:2	G	G]2:201224090]	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=138022:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:201224090(+)-2:201224836(+)__2_201218501_201243501D;SPAN=746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59
2	204726519	138791:1	A	A[2:204836612[	33	PASS	EVDNC=ASSMB;INSERTION=TCACCTT;MAPQ=60;MATEID=138791:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_204820001_204845001_17C;SPAN=110093;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:7:3:33,3,0:11:0:-33.01:33.01
2	204836612	138791:2	G	]2:204726519]G	33	PASS	EVDNC=ASSMB;INSERTION=TCACCTT;MAPQ=60;MATEID=138791:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_204820001_204845001_17C;SPAN=110093;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:7:3:33,3,0:11:0:-33.01:33.01
2	207609829	139331:1	G	G[2:207612088[	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=139331:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:207609829(+)-2:207612088(-)__2_207588501_207613501D;SPAN=2259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
2	207612088	139331:2	T	]2:207609829]T	29	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=139331:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:207609829(+)-2:207612088(-)__2_207588501_207613501D;SPAN=2259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
2	208098598	139470:1	T	]Un_KN707702v1_decoy:6466]T	82	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AAAATTTTTTGGGTACATAGTAGGTATATATATTTAA;INSERTION=A;MAPQ=60;MATEID=139470:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_2_208078501_208103501_28C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	208587006	139691:1	T	T[2:208587320[	10	PASS	EVDNC=ASSMB;HOMSEQ=GTTTGTTGATTTTT;MAPQ=60;MATEID=139691:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_208568501_208593501_24C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:22:10.4:10.4,0,43.4:5:0:-10.32:11.56
2	208587320	139691:2	G	]2:208587006]G	10	PASS	EVDNC=ASSMB;HOMSEQ=GTTTGTTGATTTTT;MAPQ=60;MATEID=139691:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_208568501_208593501_24C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:22:10.4:10.4,0,43.4:5:0:-10.32:11.56
2	212191435	140743:1	A	]2:212191551]A	53	PASS	EVDNC=ASSMB;INSERTION=ACATGTTATACCTGTTATATATA;MAPQ=60;MATEID=140743:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_212170001_212195001_87C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66
2	212191551	140743:2	T	T[2:212191435[	53	PASS	EVDNC=ASSMB;INSERTION=ACATGTTATACCTGTTATATATA;MAPQ=60;MATEID=140743:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_212170001_212195001_87C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66
2	212709962	140980:1	C	C[2:212710254[	69	PASS	EVDNC=ASSMB;HOMSEQ=AAAATAGCAAGGCCC;MAPQ=60;MATEID=140980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_212709001_212734001_32C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	212710254	140980:2	A	]2:212709962]A	69	PASS	EVDNC=ASSMB;HOMSEQ=AAAATAGCAAGGCCC;MAPQ=60;MATEID=140980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_212709001_212734001_32C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	213306364	141169:1	T	T[Un_KN707739v1_decoy:1[	75	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=141169:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_213297001_213322001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:11:6.9:75.9,6.9,0:25:0:-75.92:75.92
2	213642624	141246:1	A	A[2:213642846[	9	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGAGACTGGTCTA;MAPQ=60;MATEID=141246:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_213640001_213665001_27C;SPAN=222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:13:9.5:9.5,0,22.7:4:0:-9.55:9.863
2	213642846	141246:2	A	]2:213642624]A	9	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGAGACTGGTCTA;MAPQ=60;MATEID=141246:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_213640001_213665001_27C;SPAN=222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:13:9.5:9.5,0,22.7:4:0:-9.55:9.863
2	214647889	141837:1	A	]2:215113891]A	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATT;MAPQ=60;MATEID=141837:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_215110001_215135001_11C;SPAN=466002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:10:7:-39.01:39.01
2	215113891	141837:2	T	T[2:214647889[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATT;MAPQ=60;MATEID=141837:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_215110001_215135001_11C;SPAN=466002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:10:7:-39.01:39.01
2	215919785	142169:1	G	]2:215919902]G	30	PASS	EVDNC=ASSMB;INSERTION=TCTTTCCTGCAAGGGCA;MAPQ=60;MATEID=142169:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_215918501_215943501_67C;SPAN=117;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15
2	215919902	142169:2	T	T[2:215919785[	30	PASS	EVDNC=ASSMB;INSERTION=TCTTTCCTGCAAGGGCA;MAPQ=60;MATEID=142169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_215918501_215943501_67C;SPAN=117;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15
2	216225272	142263:1	T	T[2:216227775[	66	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=142263:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:216225272(+)-2:216227775(-)__2_216212501_216237501D;SPAN=2503;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:10:6:66,6,0:0:22:-66.02:66.02
2	216227775	142263:2	C	]2:216225272]C	66	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=142263:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:216225272(+)-2:216227775(-)__2_216212501_216237501D;SPAN=2503;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:10:6:66,6,0:0:22:-66.02:66.02
2	216228074	142267:1	T	T[2:216228389[	69	PASS	EVDNC=ASSMB;HOMSEQ=TCTTTCTTTCTTTCT;MAPQ=60;MATEID=142267:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_216212501_216237501_20C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	216228389	142267:2	T	]2:216228074]T	69	PASS	EVDNC=ASSMB;HOMSEQ=TCTTTCTTTCTTTCT;MAPQ=60;MATEID=142267:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_216212501_216237501_20C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	217091173	142474:1	G	G[2:217092544[	69	PASS	EVDNC=ASSMB;HOMSEQ=GGTGG;MAPQ=60;MATEID=142474:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_217070001_217095001_2C;SPAN=1371;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	217092544	142474:2	G	]2:217091173]G	69	PASS	EVDNC=ASSMB;HOMSEQ=GGTGG;MAPQ=60;MATEID=142474:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_217070001_217095001_2C;SPAN=1371;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	219367977	143177:1	C	C[2:219368443[	89	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCAAGATCACACCATTGCACTCCAGCCTGGGTGACAGAGC;MAPQ=60;MATEID=143177:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_219348501_219373501_5C;SPAN=466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:23:8.1:89.1,8.1,0:19:16:-89.12:89.12
2	219368443	143177:2	C	]2:219367977]C	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGATCACACCATTGCACTCCAGCCTGGGTGACAGAGC;MAPQ=60;MATEID=143177:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_219348501_219373501_5C;SPAN=466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:23:8.1:89.1,8.1,0:19:16:-89.12:89.12
2	220481216	143576:1	C	C[2:220481540[	35	PASS	EVDNC=ASSMB;HOMSEQ=TTTTC;MAPQ=60;MATEID=143576:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_220475501_220500501_164C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78
2	220481540	143576:2	T	]2:220481216]T	35	PASS	EVDNC=ASSMB;HOMSEQ=TTTTC;MAPQ=60;MATEID=143576:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_220475501_220500501_164C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78
2	230460594	146493:1	T	T[2:230460923[	34	PASS	EVDNC=ASSMB;HOMSEQ=GGTAATCTGTTTCTT;MAPQ=60;MATEID=146493:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_230447001_230472001_45C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
2	230460923	146493:2	G	]2:230460594]G	34	PASS	EVDNC=ASSMB;HOMSEQ=GGTAATCTGTTTCTT;MAPQ=60;MATEID=146493:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_230447001_230472001_45C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
2	232514141	146962:1	C	C[2:232515638[	25	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=146962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_232505001_232530001_66C;SPAN=1497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
2	232515638	146962:2	C	]2:232514141]C	25	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=146962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_232505001_232530001_66C;SPAN=1497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
2	237405139	148427:1	T	]2:237625329]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=148427:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_237601001_237626001_14C;SPAN=220190;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:15:9.3:102.3,9.3,0:34:0:-102.3:102.3
2	237517179	148353:1	G	]2:237517715]G	43	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=148353:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:237517179(-)-2:237517715(+)__2_237503001_237528001D;SPAN=536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:69:43.4:43.4,0,129.2:0:19:-43.32:45.76
2	237517715	148353:2	G	G[2:237517179[	43	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=148353:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:237517179(-)-2:237517715(+)__2_237503001_237528001D;SPAN=536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:69:43.4:43.4,0,129.2:0:19:-43.32:45.76
2	237561091	148404:1	T	]17:497801]T	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=148404:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_237552001_237577001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:41:21.5:21.5,0,80.9:7:6:-21.49:23.47
2	237623393	716693:1	C	C[14:104206456[	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=716693:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_104198501_104223501_154C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
2	237625329	148427:2	C	C[2:237405139[	99	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=148427:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_237601001_237626001_14C;SPAN=220190;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:15:9.3:102.3,9.3,0:34:0:-102.3:102.3
2	238591867	148627:1	C	C[2:238593091[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=148627:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:238591867(+)-2:238593091(-)__2_238581001_238606001D;SPAN=1224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
2	238593091	148627:2	A	]2:238591867]A	23	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=148627:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:238591867(+)-2:238593091(-)__2_238581001_238606001D;SPAN=1224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
2	240614048	918199:1	C	]22:34476818]C	25	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=918199:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_34471501_34496501_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99
3	503842	149668:1	T	T[3:504455[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CC;MAPQ=60;MATEID=149668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_490001_515001_9C;SPAN=613;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:5:9:-25.91:26.93
3	504455	149668:2	T	]3:503842]T	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CC;MAPQ=60;MATEID=149668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_490001_515001_9C;SPAN=613;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:5:9:-25.91:26.93
3	927890	149808:1	G	]3:953617]G	24	PASS	EVDNC=ASSMB;INSERTION=AGCCACG;MAPQ=60;MATEID=149808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_931001_956001_12C;SPAN=25727;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
3	953617	149808:2	A	A[3:927890[	24	PASS	EVDNC=ASSMB;INSERTION=AGCCACG;MAPQ=60;MATEID=149808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_931001_956001_12C;SPAN=25727;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
3	1263028	149945:1	T	T[3:1264837[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGT;MAPQ=60;MATEID=149945:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_1249501_1274501_18C;SPAN=1809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:6:2:-15.73:18.19
3	1264837	149945:2	T	]3:1263028]T	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGT;MAPQ=60;MATEID=149945:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_1249501_1274501_18C;SPAN=1809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:6:2:-15.73:18.19
3	1279142	149948:1	G	G[3:1279700[	20	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=149948:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_3_1274001_1299001_10C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:70:20:20,0,155.3:12:0:-19.94:26.09
3	1279700	149948:2	G	]3:1279142]G	20	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=149948:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_3_1274001_1299001_10C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:70:20:20,0,155.3:12:0:-19.94:26.09
3	1927848	150204:1	C	C[3:1930087[	26	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=150204:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_1911001_1936001_6C;SPAN=2239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:45:26.9:26.9,0,86.3:12:0:-26.96:28.7
3	1930087	150204:2	C	]3:1927848]C	26	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=150204:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_1911001_1936001_6C;SPAN=2239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:45:26.9:26.9,0,86.3:12:0:-26.96:28.7
3	2224305	150313:1	T	]3:2238399]T	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=150313:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_2229501_2254501_6C;SPAN=14094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:10:10:-46.91:46.91
3	2238399	150313:2	C	C[3:2224305[	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=150313:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_2229501_2254501_6C;SPAN=14094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:10:10:-46.91:46.91
3	2523747	150456:1	C	C[3:2567702[	31	PASS	EVDNC=ASSMB;INSERTION=AATTCCCATTTCTCCTCAA;MAPQ=60;MATEID=150456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_2548001_2573001_7C;SPAN=43955;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
3	2567702	150456:2	T	]3:2523747]T	31	PASS	EVDNC=ASSMB;INSERTION=AATTCCCATTTCTCCTCAA;MAPQ=60;MATEID=150456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_2548001_2573001_7C;SPAN=43955;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
3	4025374	150957:1	T	T[3:4027871[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=150957:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:4025374(+)-3:4027871(-)__3_4018001_4043001D;SPAN=2497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:55:17:15.3:168.3,15.3,0:0:55:-168.3:168.3
3	4027871	150957:2	G	]3:4025374]G	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=150957:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:4025374(+)-3:4027871(-)__3_4018001_4043001D;SPAN=2497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:55:17:15.3:168.3,15.3,0:0:55:-168.3:168.3
3	4765626	151198:1	A	A[3:4819268[	26	PASS	EVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=151198:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_4802001_4827001_11C;SPAN=53642;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
3	4819268	151198:2	A	]3:4765626]A	26	PASS	EVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=151198:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_4802001_4827001_11C;SPAN=53642;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
3	6311359	151854:1	T	]3:6311647]T	99	PASS	EVDNC=ASSMB;INSERTION=GAACCTCAGTAAGT;MAPQ=60;MATEID=151854:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_6296501_6321501_2C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:53:31.4:100.7,0,31.4:35:0:-102.5:102.5
3	6311647	151854:2	G	G[3:6311359[	99	PASS	EVDNC=ASSMB;INSERTION=GAACCTCAGTAAGT;MAPQ=60;MATEID=151854:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_6296501_6321501_2C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:53:31.4:100.7,0,31.4:35:0:-102.5:102.5
3	6604527	151993:1	C	[3:6612951[C	81	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAATTA;MAPQ=60;MATEID=151993:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AA;SCTG=c_3_6590501_6615501_5C;SPAN=8424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:40:18.5:81.2,0,18.5:21:11:-83.3:83.3
3	6604720	151995:1	A	A]3:6608526]	72	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=151995:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6604720(+)-3:6608526(+)__3_6590501_6615501D;SPAN=3806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:26:3.9:72.6,3.9,0:0:23:-73.74:73.74
3	6608526	151995:2	G	G]3:6604720]	72	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=151995:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6604720(+)-3:6608526(+)__3_6590501_6615501D;SPAN=3806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:26:3.9:72.6,3.9,0:0:23:-73.74:73.74
3	6608570	151999:1	T	T[3:6612945[	92	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=151999:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6608570(+)-3:6612945(-)__3_6590501_6615501D;SPAN=4375;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:5:8.4:92.4,8.4,0:0:30:-92.42:92.42
3	6612945	151999:2	A	]3:6608570]A	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=151999:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6608570(+)-3:6612945(-)__3_6590501_6615501D;SPAN=4375;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:5:8.4:92.4,8.4,0:0:30:-92.42:92.42
3	6612951	151993:2	T	[3:6604527[T	81	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAATTA;MAPQ=60;MATEID=151993:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AA;SCTG=c_3_6590501_6615501_5C;SPAN=8424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:40:18.5:81.2,0,18.5:21:11:-83.3:83.3
3	7404156	152269:1	T	]3:7437597]T	20	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=152269:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_7423501_7448501_25C;SPAN=33441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
3	7437597	152269:2	T	T[3:7404156[	20	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=152269:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_7423501_7448501_25C;SPAN=33441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
3	7997094	152479:1	T	]3:8055413]T	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=152479:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_8036001_8061001_9C;SPAN=58319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
3	8055413	152479:2	A	A[3:7997094[	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=152479:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_8036001_8061001_9C;SPAN=58319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
3	9340576	152847:1	C	]3:9357043]C	15	PASS	EVDNC=ASSMB;INSERTION=GGATTCCATGAGTCAGGCAGAC;MAPQ=60;MATEID=152847:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_9334501_9359501_22C;SPAN=16467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78
3	9357043	152847:2	A	A[3:9340576[	15	PASS	EVDNC=ASSMB;INSERTION=GGATTCCATGAGTCAGGCAGAC;MAPQ=60;MATEID=152847:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_9334501_9359501_22C;SPAN=16467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78
3	10636914	153237:1	T	T]11:78154046]	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAA;MAPQ=60;MATEID=153237:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_10633001_10658001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:10:4:-37.47:37.47
3	11599603	518254:1	C	C]9:130392964]	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTC;MAPQ=60;MATEID=518254:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_9_130389001_130414001_29C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:9:12:-49.51:49.51
3	11914405	153544:1	T	T[3:12871893[	52	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=153544:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914405(+)-3:12871893(-)__3_11907001_11932001D;SPAN=957488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:7:4.8:52.8,4.8,0:0:18:-52.81:52.81
3	11914580	153548:1	A	]3:12872086]A	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=153548:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914580(-)-3:12872086(+)__3_11907001_11932001D;SPAN=957506;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35
3	12871893	153544:2	T	]3:11914405]T	52	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=153544:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914405(+)-3:12871893(-)__3_11907001_11932001D;SPAN=957488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:7:4.8:52.8,4.8,0:0:18:-52.81:52.81
3	12872086	153548:2	A	A[3:11914580[	25	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=153548:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914580(-)-3:12872086(+)__3_11907001_11932001D;SPAN=957506;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35
3	13639803	154020:1	T	T[3:13640772[	75	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=154020:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:13639803(+)-3:13640772(-)__3_13622001_13647001D;SPAN=969;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:0:25:-75.92:75.92
3	13640772	154020:2	A	]3:13639803]A	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154020:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:13639803(+)-3:13640772(-)__3_13622001_13647001D;SPAN=969;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:0:25:-75.92:75.92
3	15230578	154422:1	G	]3:15359990]G	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=154422:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_15214501_15239501_5C;SPAN=129412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43
3	15359990	154422:2	T	T[3:15230578[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=154422:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_15214501_15239501_5C;SPAN=129412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43
3	17060242	154851:1	C	]3:17080219]C	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:17060242(-)-3:17080219(+)__3_17076501_17101501D;SPAN=19977;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:0:13:-37.47:37.47
3	17080219	154851:2	G	G[3:17060242[	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:17060242(-)-3:17080219(+)__3_17076501_17101501D;SPAN=19977;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:0:13:-37.47:37.47
3	20552852	155688:1	C	C[3:20553073[	2	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGGCAGTGGGAGCAGGCACTTC;MAPQ=60;MATEID=155688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_20531001_20556001_2C;SPAN=221;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:39:2.3:2.3,0,94.7:4:0:-2.241:7.735
3	20553073	155688:2	G	]3:20552852]G	2	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGGCAGTGGGAGCAGGCACTTC;MAPQ=60;MATEID=155688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_20531001_20556001_2C;SPAN=221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:39:2.3:2.3,0,94.7:4:0:-2.241:7.735
3	21370237	155889:1	A	]3:21373497]A	17	PASS	EVDNC=ASSMB;INSERTION=ATAAATGTTCTCCAATTTCTAC;MAPQ=60;MATEID=155889:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_21364001_21389001_12C;SPAN=3260;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24
3	21373497	155889:2	C	C[3:21370237[	17	PASS	EVDNC=ASSMB;INSERTION=ATAAATGTTCTCCAATTTCTAC;MAPQ=60;MATEID=155889:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_21364001_21389001_12C;SPAN=3260;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24
3	21682213	155995:1	T	T[3:21684475[	99	PASS	EVDNC=ASSMB;INSERTION=CTCTCTCTCTCTCTCTCTCTCTCC;MAPQ=60;MATEID=155995:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_3_21658001_21683001_0C;SPAN=2262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:6:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	21684475	155995:2	C	]3:21682213]C	99	PASS	EVDNC=ASSMB;INSERTION=CTCTCTCTCTCTCTCTCTCTCTCC;MAPQ=60;MATEID=155995:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_3_21658001_21683001_0C;SPAN=2262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:6:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	22050869	156124:1	G	G[3:22056304[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTCAATGTG;MAPQ=60;MATEID=156124:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_22050001_22075001_1C;SPAN=5435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:35:9.6:105.6,9.6,0:35:0:-105.6:105.6
3	22056304	156124:2	A	]3:22050869]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTCAATGTG;MAPQ=60;MATEID=156124:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_22050001_22075001_1C;SPAN=5435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:35:9.6:105.6,9.6,0:35:0:-105.6:105.6
3	23466045	167961:1	T	T[3:73822008[	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAT;MAPQ=60;MATEID=167961:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_73818501_73843501_134C;SPAN=50355963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:19:14.6:14.6,0,31.1:5:5:-14.47:14.88
3	26409479	157128:1	T	T[3:26410808[	92	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=157128:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_3_26386501_26411501_35C;SPAN=1329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42
3	26410808	157128:2	T	]3:26409479]T	92	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=157128:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_3_26386501_26411501_35C;SPAN=1329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42
3	28705934	157608:1	C	[3:28772274[C	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=157608:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_28763001_28788001_11C;SPAN=66340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:6:8:-32.06:32.06
3	28758676	157609:1	T	T]3:28780225]	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TATAG;MAPQ=60;MATEID=157609:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_28763001_28788001_0C;SPAN=21549;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:9:9:-49.51:49.51
3	28772274	157608:2	A	[3:28705934[A	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=157608:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_28763001_28788001_11C;SPAN=66340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:6:8:-32.06:32.06
3	28780225	157609:2	A	A]3:28758676]	49	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TATAG;MAPQ=60;MATEID=157609:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_28763001_28788001_0C;SPAN=21549;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:9:9:-49.51:49.51
3	32060560	158220:1	C	C[3:32066392[	92	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=158220:2;MATENM=7;NM=3;NUMPARTS=2;SCTG=c_3_32046001_32071001_6C;SPAN=5832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42
3	32066392	158220:2	C	]3:32060560]C	92	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=158220:1;MATENM=3;NM=7;NUMPARTS=2;SCTG=c_3_32046001_32071001_6C;SPAN=5832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42
3	32765329	158374:1	A	A[3:32766533[	46	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=158374:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:32765329(+)-3:32766533(-)__3_32756501_32781501D;SPAN=1204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:2:4.2:46.2,4.2,0:0:15:-46.21:46.21
3	32766533	158374:2	T	]3:32765329]T	46	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=158374:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:32765329(+)-3:32766533(-)__3_32756501_32781501D;SPAN=1204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:2:4.2:46.2,4.2,0:0:15:-46.21:46.21
3	41580812	160035:2	A	]1:44104205]A	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=160035:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_41576501_41601501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
3	41609700	160041:2	A	A[1:44098924[	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=160041:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:44098924(-)-3:41609700(+)__3_41601001_41626001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71
3	41969203	160126:1	G	]3:42014202]G	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=160126:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:41969203(-)-3:42014202(+)__3_41993001_42018001D;SPAN=44999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
3	42014202	160126:2	C	C[3:41969203[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=160126:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:41969203(-)-3:42014202(+)__3_41993001_42018001D;SPAN=44999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
3	42796989	160264:1	C	C[3:42799318[	59	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=160264:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:42796989(+)-3:42799318(-)__3_42777001_42802001D;SPAN=2329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41
3	42799318	160264:2	A	]3:42796989]A	59	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=160264:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:42796989(+)-3:42799318(-)__3_42777001_42802001D;SPAN=2329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41
3	43549152	160436:1	G	]3:43790599]G	49	PASS	DISC_MAPQ=52;EVDNC=ASDIS;INSERTION=AAT;MAPQ=60;MATEID=160436:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_43781501_43806501_1C;SPAN=241447;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:9:4.5:49.5,4.5,0:12:13:-49.51:49.51
3	43790599	160436:2	C	C[3:43549152[	49	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=AAT;MAPQ=60;MATEID=160436:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_43781501_43806501_1C;SPAN=241447;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:9:4.5:49.5,4.5,0:12:13:-49.51:49.51
3	44699499	160603:1	C	[3:44700771[C	82	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=160603:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_44688001_44713001_21C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:15:7.5:82.5,7.5,0:17:14:-82.52:82.52
3	44699521	160604:1	A	A]3:44700793]	35	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=160604:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_44688001_44713001_3C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:7:7:-37.11:37.11
3	44700771	160603:2	T	[3:44699499[T	82	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=160603:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_44688001_44713001_21C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:15:7.5:82.5,7.5,0:17:14:-82.52:82.52
3	44700793	160604:2	G	G]3:44699521]	35	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=160604:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_44688001_44713001_3C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:7:7:-37.11:37.11
3	47737029	161208:1	A	]4:100603230]A	32	PASS	EVDNC=ASSMB;HOMSEQ=ACC;MAPQ=60;MATEID=161208:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_47726001_47751001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
3	47825187	161281:1	G	G[4:100380547[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=161281:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:47825187(+)-4:100380547(-)__3_47824001_47849001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
3	48900724	161458:1	C	C[3:48902495[	46	PASS	EVDNC=ASSMB;HOMSEQ=TGAACC;MAPQ=60;MATEID=161458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_48877501_48902501_6C;SPAN=1771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:15:0:-46.21:46.21
3	48902495	161458:2	T	]3:48900724]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TGAACC;MAPQ=60;MATEID=161458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_48877501_48902501_6C;SPAN=1771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:15:0:-46.21:46.21
3	50184842	161692:1	C	]3:50407164]C	28	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=161692:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_50176001_50201001_0C;SPAN=222322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
3	50407164	161692:2	G	G[3:50184842[	28	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=161692:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_50176001_50201001_0C;SPAN=222322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
3	51393313	161916:1	G	G]3:51496273]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=161916:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:51393313(+)-3:51496273(+)__3_51376501_51401501D;SPAN=102960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
3	51496273	161916:2	C	C]3:51393313]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=161916:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:51393313(+)-3:51496273(+)__3_51376501_51401501D;SPAN=102960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
3	57537096	163075:1	A	A[3:57538371[	52	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=163075:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:57537096(+)-3:57538371(-)__3_57526001_57551001D;SPAN=1275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81
3	57538371	163075:2	A	]3:57537096]A	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=163075:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:57537096(+)-3:57538371(-)__3_57526001_57551001D;SPAN=1275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81
3	60296487	163598:1	T	T[3:60313542[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=163598:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_60294501_60319501_28C;SPAN=17055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
3	60313542	163598:2	A	]3:60296487]A	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=163598:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_60294501_60319501_28C;SPAN=17055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
3	60765503	163725:1	A	]3:60814698]A	42	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=163725:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_60809001_60834001_1C;SPAN=49195;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:14:0:-42.91:42.91
3	60814698	163725:2	A	A[3:60765503[	42	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=163725:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_60809001_60834001_1C;SPAN=49195;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:14:0:-42.91:42.91
3	61619502	809610:1	G	[17:58558972[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=809610:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58555001_58580001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:99:40:27.6:303.6,27.6,0:43:68:-303.7:303.7
3	61639528	809639:1	C	[17:58608924[C	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=809639:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_58604001_58629001_60C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:106:0.2:0.2,0,264.2:3:7:0.08672:16.63
3	61807360	164077:1	T	[20:54727260[T	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTACA;MAPQ=60;MATEID=164077:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_61789001_61814001_51C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:98:15.5:15.5,0,230:9:8:-15.37:26.69
3	61900033	164115:1	T	T[20:47231949[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GA;MAPQ=60;MATEID=164115:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_61887001_61912001_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:74:0.9:0,0.9,188.1:4:3:0.9948:10.96
3	62083030	164220:1	A	A[3:62083994[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=164220:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62083001_62108001_96C;SPAN=964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:142:16.6:0,16.6,389.4:6:2:16.81:11.23
3	62083994	164220:2	A	]3:62083030]A	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=164220:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62083001_62108001_96C;SPAN=964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:142:16.6:0,16.6,389.4:6:2:16.81:11.23
3	62586884	164465:1	A	A]8:72874467]	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=164465:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62573001_62598001_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:89:5.1:0,5.1,234.3:4:3:5.211:10.46
3	62653401	27425:2	G	G[1:113798539[	15	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=27425:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113778001_113803001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
3	62727512	164561:1	A	[20:54778249[A	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=164561:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_62720001_62745001_150C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:40:78:83.9:110.3,0,83.9:29:24:-110.3:110.3
3	62730756	164554:2	A	A[1:113905874[	29	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=164554:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_62720001_62745001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:72:29.3:29.3,0,151.4:15:0:-29.28:34.02
3	62828754	164615:1	T	T[3:62829192[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=164615:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62818001_62843001_96C;SPAN=438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:145:10.9:0,10.9,386.1:6:4:11.05:15.36
3	62829192	164615:2	G	]3:62828754]G	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=164615:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62818001_62843001_96C;SPAN=438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:145:10.9:0,10.9,386.1:6:4:11.05:15.36
3	62858227	165000:1	C	]3:63528112]C	62	PASS	EVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=165000:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_63504001_63529001_97C;SPAN=669885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:82:62.9:62.9,0,142.1:26:0:-62.78:64.53
3	62865005	164629:1	T	T[20:53847498[	46	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=164629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62842501_62867501_139C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:82:46.4:46.4,0,158.6:21:0:-46.27:49.79
3	62865047	164618:2	G	[1:114215076[G	99	PASS	DISC_MAPQ=59;EVDNC=TSI_G;HOMSEQ=T;INSERTION=GAATATGGAAGAACCCCCAAGAAATGTTTTGAACACAGTA;MAPQ=60;MATEID=164618:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_3_62842501_62867501_111C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:39:97:99:101.6,0,141.2:29:15:-101.5:101.9
3	62871544	164633:2	T	[1:114236570[T	96	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=164633:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_62867001_62892001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:81:96.2:96.2,0,106.1:26:15:-96.07:96.11
3	62965447	165001:1	A	[3:63505004[A	13	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=165001:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_117C;SPAN=539557;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:82:13.4:13.4,0,191.6:9:3:-13.26:22.64
3	62965785	164691:1	G	G]3:62966272]	0	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=164691:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:62965785(+)-3:62966272(+)__3_62965001_62990001D;SPAN=487;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:202:30.1:0,30.1,567.7:0:8:30.37:12.07
3	62966272	164691:2	T	T]3:62965785]	0	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=164691:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:62965785(+)-3:62966272(+)__3_62965001_62990001D;SPAN=487;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:202:30.1:0,30.1,567.7:0:8:30.37:12.07
3	63046108	165003:1	G	[3:63510792[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=165003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_88C;SPAN=464684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:51:88:77.6:143.6,0,77.6:36:34:-144.7:144.7
3	63094518	164981:1	C	C[3:63456384[	28	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=164981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63455001_63480001_2C;SPAN=361866;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:77:28.1:28.1,0,163.4:15:0:-27.87:33.53
3	63456384	164981:2	G	]3:63094518]G	28	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=164981:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63455001_63480001_2C;SPAN=361866;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:77:28.1:28.1,0,163.4:15:0:-27.87:33.53
3	63505004	165001:2	T	[3:62965447[T	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=165001:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_117C;SPAN=539557;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:82:13.4:13.4,0,191.6:9:3:-13.26:22.64
3	63510792	165003:2	G	[3:63046108[G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=165003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_88C;SPAN=464684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:51:88:77.6:143.6,0,77.6:36:34:-144.7:144.7
3	63528112	165000:2	C	C[3:62858227[	62	PASS	EVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=165000:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_97C;SPAN=669885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:82:62.9:62.9,0,142.1:26:0:-62.78:64.53
3	63626756	165075:2	C	]1:114690356]C	50	PASS	EVDNC=ASSMB;INSERTION=CAAAAGC;MAPQ=60;MATEID=165075:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63626501_63651501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:81:50:50,0,152.3:22:0:-49.85:52.82
3	63718451	810346:1	T	]17:60802106]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=810346:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_60784501_60809501_53C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:51:80:53.6:146,0,53.6:51:0:-148.1:148.1
3	63755964	165192:1	C	C[3:63992058[	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=165192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63969501_63994501_3C;SPAN=236094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:56:119:99:151.4,0,148.1:56:0:-151.4:151.4
3	63948014	165185:2	G	G[1:106192958[	99	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=165185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63945001_63970001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:53:14.7:161.7,14.7,0:49:0:-160.5:160.5
3	63976823	809737:1	A	]17:58731201]A	38	PASS	EVDNC=ASSMB;HOMSEQ=ACCT;MAPQ=60;MATEID=809737:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_58726501_58751501_107C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:88:38:38,0,183.2:19:0:-37.98:43.43
3	63992058	165192:2	C	]3:63755964]C	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=165192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63969501_63994501_3C;SPAN=236094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:56:119:99:151.4,0,148.1:56:0:-151.4:151.4
3	64698562	27426:2	T	]1:113801494]T	25	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=27426:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_113778001_113803001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06
3	66074255	165649:1	C	]3:66074906]C	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=165649:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_66052001_66077001_132C;SPAN=651;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:39:12.2:84.8,0,12.2:16:21:-87.73:87.73
3	66074906	165649:2	C	C[3:66074255[	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=165649:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_66052001_66077001_132C;SPAN=651;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:39:12.2:84.8,0,12.2:16:21:-87.73:87.73
3	66713349	165844:1	G	]3:66713486]G	29	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=165844:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_66689001_66714001_52C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:35:29.9:29.9,0,56.3:12:0:-29.77:30.28
3	66713486	165844:2	G	G[3:66713349[	29	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=165844:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_66689001_66714001_52C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:35:29.9:29.9,0,56.3:12:0:-29.77:30.28
3	67443400	166105:1	C	C[3:67446375[	36	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=166105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:67443400(+)-3:67446375(-)__3_67424001_67449001D;SPAN=2975;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
3	67446375	166105:2	A	]3:67443400]A	36	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=166105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:67443400(+)-3:67446375(-)__3_67424001_67449001D;SPAN=2975;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
3	67849380	166213:1	A	A[3:67851162[	23	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=166213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67840501_67865501_21C;SPAN=1782;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59
3	67851162	166213:2	T	]3:67849380]T	23	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=166213:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67840501_67865501_21C;SPAN=1782;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59
3	67959153	166245:1	A	A[3:67960425[	59	PASS	EVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=166245:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67938501_67963501_55C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
3	67960425	166245:2	C	]3:67959153]C	59	PASS	EVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=166245:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67938501_67963501_55C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
3	68585622	166416:1	T	T[3:68591103[	18	PASS	EVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=166416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68575501_68600501_24C;SPAN=5481;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27
3	68591103	166416:2	A	]3:68585622]A	18	PASS	EVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=166416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68575501_68600501_24C;SPAN=5481;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27
3	68841064	166474:1	A	A[3:68841345[	27	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAATCCA;MAPQ=60;MATEID=166474:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68820501_68845501_187C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73
3	68841345	166474:2	A	]3:68841064]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAATCCA;MAPQ=60;MATEID=166474:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68820501_68845501_187C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73
3	70894164	167013:1	T	T[3:70894499[	99	PASS	DISC_MAPQ=42;EVDNC=ASDIS;INSERTION=GGT;MAPQ=60;MATEID=167013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_70878501_70903501_21C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:5:9:99,9,0:27:8:-99.02:99.02
3	70894499	167013:2	T	]3:70894164]T	99	PASS	DISC_MAPQ=31;EVDNC=ASDIS;INSERTION=GGT;MAPQ=60;MATEID=167013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_70878501_70903501_21C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:5:9:99,9,0:27:8:-99.02:99.02
3	72330575	167459:1	A	A[3:72330856[	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACGAAGACAGTA;MAPQ=60;MATEID=167459:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_72324001_72349001_32C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39
3	72330856	167459:2	A	]3:72330575]A	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACGAAGACAGTA;MAPQ=60;MATEID=167459:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_72324001_72349001_32C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39
3	73013926	167710:1	C	C[3:73014404[	43	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=167710:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_3_73010001_73035001_71C;SPAN=478;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:5:10:-44.87:44.87
3	73014404	167710:2	G	]3:73013926]G	43	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=167710:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_3_73010001_73035001_71C;SPAN=478;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:5:10:-44.87:44.87
3	73822008	167961:2	A	]3:23466045]A	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAT;MAPQ=60;MATEID=167961:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_73818501_73843501_134C;SPAN=50355963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:19:14.6:14.6,0,31.1:5:5:-14.47:14.88
3	74716275	168219:1	T	T[3:74716585[	46	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGTTATTTTCT;MAPQ=60;MATEID=168219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_74700501_74725501_73C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
3	74716585	168219:2	T	]3:74716275]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGTTATTTTCT;MAPQ=60;MATEID=168219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_74700501_74725501_73C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
3	75414219	189909:1	T	T[3:130080581[	49	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=189909:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414219(+)-3:130080581(-)__3_130070501_130095501D;SPAN=54666362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51
3	75414274	378752:1	T	]7:6923050]T	30	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=378752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414274(-)-7:6923050(+)__7_6909001_6934001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:0:11:-30.82:30.82
3	75662822	872855:1	A	A]20:29418432]	23	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=872855:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75662822(+)-20:29418432(+)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
3	75668011	168580:1	A	A]20:29412524]	37	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=168580:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75668011(+)-20:29412524(+)__3_75656001_75681001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:44:37.1:37.1,0,73.4:0:15:-37.15:37.81
3	75673010	872869:1	A	[20:29407505[A	33	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=872869:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75673010(-)-20:29407505(-)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:45:33.5:33.5,0,79.7:0:14:-33.57:34.6
3	75703640	168761:1	T	[20:29375944[T	66	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=168761:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75703640(-)-20:29375944(-)__3_75680501_75705501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:26:0.6:66,0.6,0:0:22:-69.34:69.34
3	80013716	170496:1	A	A]3:80016128]	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=170496:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_79992501_80017501_19C;SPAN=2412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:9:4:-37.05:37.05
3	80015320	170497:1	A	[3:80015952[A	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTTG;MAPQ=60;MATEID=170497:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_79992501_80017501_23C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:15:6:-46.05:46.05
3	80015952	170497:2	C	[3:80015320[C	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTTG;MAPQ=60;MATEID=170497:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_79992501_80017501_23C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:15:6:-46.05:46.05
3	80016128	170496:2	A	A]3:80013716]	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=170496:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_79992501_80017501_19C;SPAN=2412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:9:4:-37.05:37.05
3	80876163	170815:1	T	T[3:80877454[	95	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=170815:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_80874501_80899501_60C;SPAN=1291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:36:3.3:95.7,3.3,0:31:0:-98.33:98.33
3	80877454	170815:2	T	]3:80876163]T	95	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=170815:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_80874501_80899501_60C;SPAN=1291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:36:3.3:95.7,3.3,0:31:0:-98.33:98.33
3	81296931	170944:1	G	G[3:81297230[	13	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGAGTACCTGTG;MAPQ=60;MATEID=170944:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81291001_81316001_36C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:22:13.7:13.7,0,40.1:6:0:-13.62:14.42
3	81297230	170944:2	A	]3:81296931]A	13	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGAGTACCTGTG;MAPQ=60;MATEID=170944:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81291001_81316001_36C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:22:13.7:13.7,0,40.1:6:0:-13.62:14.42
3	81858356	171075:1	C	C[3:81858662[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAACTGGTAAACC;MAPQ=60;MATEID=171075:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81854501_81879501_38C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:20:9.6:105.6,9.6,0:27:11:-105.6:105.6
3	81858662	171075:2	A	]3:81858356]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAACTGGTAAACC;MAPQ=60;MATEID=171075:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81854501_81879501_38C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:20:9.6:105.6,9.6,0:27:11:-105.6:105.6
3	83803977	171677:1	T	T[3:83806199[	89	PASS	EVDNC=ASSMB;HOMSEQ=TATATGGCCTTTT;MAPQ=60;MATEID=171677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_83790001_83815001_51C;SPAN=2222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:20:8.1:89.1,8.1,0:29:0:-89.12:89.12
3	83806199	171677:2	T	]3:83803977]T	89	PASS	EVDNC=ASSMB;HOMSEQ=TATATGGCCTTTT;MAPQ=60;MATEID=171677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_83790001_83815001_51C;SPAN=2222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:20:8.1:89.1,8.1,0:29:0:-89.12:89.12
3	84055791	171778:1	C	C[3:84058234[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=171778:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_84035001_84060001_31C;SPAN=2443;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:8:2:-23.53:23.59
3	84058234	171778:2	A	]3:84055791]A	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=171778:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_84035001_84060001_31C;SPAN=2443;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:8:2:-23.53:23.59
3	88404582	173339:1	T	T[3:88404859[	66	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=173339:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_88396001_88421001_37C;SPAN=277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:21:6:66,6,0:22:0:-66.02:66.02
3	88404859	173339:2	C	]3:88404582]C	66	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=173339:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_88396001_88421001_37C;SPAN=277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:21:6:66,6,0:22:0:-66.02:66.02
3	89460367	398109:1	T	]7:62334070]T	44	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=398109:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_62328001_62353001_253C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:5:14:-45.49:45.49
3	90350671	173897:1	T	]3:90351556]T	21	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TCCAAATATCCACTTGCAGATTTTACAAAAAG;MAPQ=39;MATEID=173897:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90331501_90356501_118C;SPAN=885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:31:21.2:21.2,0,54.2:2:8:-21:21.92
3	90351556	173897:2	G	G[3:90350671[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCCAAATATCCACTTGCAGATTTTACAAAAAG;MAPQ=60;MATEID=173897:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90331501_90356501_118C;SPAN=885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:31:21.2:21.2,0,54.2:2:8:-21:21.92
3	90402956	173942:1	A	]3:90403683]A	26	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AAAGAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTG;MAPQ=60;MATEID=173942:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90380501_90405501_95C;SPAN=727;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:8:6:-26.4:28.44
3	90403683	173942:2	G	G[3:90402956[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTG;MAPQ=60;MATEID=173942:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90380501_90405501_95C;SPAN=727;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:8:6:-26.4:28.44
3	90498706	174243:1	G	G[3:90599779[	17	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=174243:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90498706(+)-3:90599779(-)__3_90478501_90503501D;SPAN=101073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
3	90536612	174785:1	C	C[3:90537933[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAATTCTTCTGTCTAGTTTTATATGAAGAAATC;MAPQ=60;MATEID=174785:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_90527501_90552501_470C;SPAN=1321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:78:21.2:21.2,0,173:8:6:-20.99:28.09
3	90537933	174785:2	T	]3:90536612]T	21	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAATTCTTCTGTCTAGTTTTATATGAAGAAATC;MAPQ=60;MATEID=174785:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_90527501_90552501_470C;SPAN=1321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:78:21.2:21.2,0,173:8:6:-20.99:28.09
3	90599779	174243:2	T	]3:90498706]T	17	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=174243:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90498706(+)-3:90599779(-)__3_90478501_90503501D;SPAN=101073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
3	90785200	177847:1	A	A[3:90900668[	66	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=177847:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90785200(+)-3:90900668(-)__3_90895001_90920001D;SPAN=115468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:8:6:66,6,0:0:22:-66.02:66.02
3	90793288	177493:1	A	]3:90968900]A	19	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=177493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90793288(-)-3:90968900(+)__3_90772501_90797501D;SPAN=175612;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:0:10:-19.52:22.68
3	90832509	177854:1	T	]3:90914890]T	26	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=177854:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90832509(-)-3:90914890(+)__3_90895001_90920001D;SPAN=82381;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
3	90863052	178318:1	T	T[3:91078769[	79	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=178318:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90863052(+)-3:91078769(-)__3_91066501_91091501D;SPAN=215717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:0:26:-81.69:81.69
3	90871032	178673:1	A	A[3:91221920[	27	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=178673:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90871032(+)-3:91221920(-)__3_91213501_91238501D;SPAN=350888;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:0:10:-27.41:27.41
3	90900668	177847:2	C	]3:90785200]C	66	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=177847:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90785200(+)-3:90900668(-)__3_90895001_90920001D;SPAN=115468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:8:6:66,6,0:0:22:-66.02:66.02
3	90914890	177854:2	C	C[3:90832509[	26	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=177854:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90832509(-)-3:90914890(+)__3_90895001_90920001D;SPAN=82381;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
3	90925354	177943:1	T	]3:91069782]T	49	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=177943:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90925354(-)-3:91069782(+)__3_90919501_90944501D;SPAN=144428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:4:4.5:49.5,4.5,0:0:17:-49.51:49.51
3	90968900	177493:2	T	T[3:90793288[	19	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=177493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90793288(-)-3:90968900(+)__3_90772501_90797501D;SPAN=175612;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:0:10:-19.52:22.68
3	91069782	177943:2	A	A[3:90925354[	49	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=177943:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90925354(-)-3:91069782(+)__3_90919501_90944501D;SPAN=144428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:4:4.5:49.5,4.5,0:0:17:-49.51:49.51
3	91078769	178318:2	T	]3:90863052]T	79	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=178318:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90863052(+)-3:91078769(-)__3_91066501_91091501D;SPAN=215717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:0:26:-81.69:81.69
3	91221920	178673:2	C	]3:90871032]C	27	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=178673:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90871032(+)-3:91221920(-)__3_91213501_91238501D;SPAN=350888;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:0:10:-27.41:27.41
3	93736476	179203:1	G	]3:93737280]G	37	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=179203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:93736476(-)-3:93737280(+)__3_93737001_93762001D;SPAN=804;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93
3	93737280	179203:2	T	T[3:93736476[	37	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=179203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:93736476(-)-3:93737280(+)__3_93737001_93762001D;SPAN=804;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93
3	95397364	179722:1	T	T[3:95397679[	49	PASS	EVDNC=ASSMB;HOMSEQ=CCAACCTGACTTACTT;MAPQ=60;MATEID=179722:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95378501_95403501_7C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
3	95397679	179722:2	C	]3:95397364]C	49	PASS	EVDNC=ASSMB;HOMSEQ=CCAACCTGACTTACTT;MAPQ=60;MATEID=179722:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95378501_95403501_7C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
3	95746924	179868:1	G	G[3:95751920[	35	PASS	EVDNC=ASSMB;HOMSEQ=CAAG;MAPQ=60;MATEID=179868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_73C;SPAN=4996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:13:0:-35.04:35.04
3	95749273	179871:1	A	]3:95752156]A	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGCATAGGG;MAPQ=60;MATEID=179871:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_35C;SPAN=2883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:23:10:-85.82:85.82
3	95751920	179868:2	C	]3:95746924]C	35	PASS	EVDNC=ASSMB;HOMSEQ=CAAG;MAPQ=60;MATEID=179868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_73C;SPAN=4996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:13:0:-35.04:35.04
3	95752156	179871:2	T	T[3:95749273[	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGCATAGGG;MAPQ=60;MATEID=179871:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_35C;SPAN=2883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:23:10:-85.82:85.82
3	99180219	180863:1	T	T[3:99183546[	26	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=180863:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_99176001_99201001_115C;SPAN=3327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
3	99183546	180863:2	C	]3:99180219]C	26	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=180863:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_99176001_99201001_115C;SPAN=3327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
3	99909938	181038:1	T	T[3:99910788[	40	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=181038:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_99886501_99911501_48C;SPAN=850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
3	99910788	181038:2	C	]3:99909938]C	40	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=181038:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_99886501_99911501_48C;SPAN=850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
3	100066519	181071:1	T	T[3:100066813[	59	PASS	EVDNC=ASSMB;HOMSEQ=GGCTTTGCTTCTT;MAPQ=60;MATEID=181071:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_100058001_100083001_45C;SPAN=294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15
3	100066813	181071:2	G	]3:100066519]G	59	PASS	EVDNC=ASSMB;HOMSEQ=GGCTTTGCTTCTT;MAPQ=60;MATEID=181071:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_100058001_100083001_45C;SPAN=294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15
3	101428791	181443:1	G	G[3:101431411[	26	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=ATTG;MAPQ=60;MATEID=181443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101430001_101455001_8C;SPAN=2620;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:9:5:-26.41:26.41
3	101431411	181443:2	A	]3:101428791]A	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATTG;MAPQ=60;MATEID=181443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101430001_101455001_8C;SPAN=2620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:9:5:-26.41:26.41
3	101469536	181461:1	A	A[3:101469849[	25	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AAAAGAACAGA;MAPQ=60;MATEID=181461:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101454501_101479501_125C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:5:5:-25.74:25.74
3	101469849	181461:2	A	]3:101469536]A	25	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=AAAAGAACAGA;MAPQ=60;MATEID=181461:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101454501_101479501_125C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:5:5:-25.74:25.74
3	102564943	181797:1	T	T[3:102565269[	16	PASS	EVDNC=ASSMB;HOMSEQ=ATTTCCTCTTCTT;MAPQ=60;MATEID=181797:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_102557001_102582001_6C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
3	102565269	181797:2	A	]3:102564943]A	16	PASS	EVDNC=ASSMB;HOMSEQ=ATTTCCTCTTCTT;MAPQ=60;MATEID=181797:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_102557001_102582001_6C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
3	103091520	181926:1	T	T[3:103091820[	62	PASS	EVDNC=ASSMB;HOMSEQ=TAGTTTTATTTTTCT;MAPQ=60;MATEID=181926:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_3_103071501_103096501_29C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68
3	103091820	181926:2	T	]3:103091520]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TAGTTTTATTTTTCT;MAPQ=60;MATEID=181926:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_3_103071501_103096501_29C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68
3	103194123	181974:1	A	A[3:103195276[	35	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=181974:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_103194001_103219001_10C;SPAN=1153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:25:26:35.9,0,26:13:0:-35.95:35.95
3	103195276	181974:2	T	]3:103194123]T	35	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=181974:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_103194001_103219001_10C;SPAN=1153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:25:26:35.9,0,26:13:0:-35.95:35.95
3	103962954	671890:1	T	]13:60886851]T	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=671890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_60882501_60907501_30C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:9:4:-33.01:33.01
3	104229404	182318:1	T	T[3:104240690[	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=182318:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104223001_104248001_62C;SPAN=11286;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:2:7:-20.79:20.87
3	104240690	182318:2	T	]3:104229404]T	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=182318:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104223001_104248001_62C;SPAN=11286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:2:7:-20.79:20.87
3	104559356	182457:1	A	A[3:104560203[	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=182457:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104541501_104566501_2C;SPAN=847;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	104560203	182457:2	A	]3:104559356]A	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=182457:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104541501_104566501_2C;SPAN=847;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	107017130	183282:1	G	G[3:107017386[	18	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=183282:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_107016001_107041001_83C;SPAN=256;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42
3	107017386	183282:2	G	]3:107017130]G	18	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=183282:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_107016001_107041001_83C;SPAN=256;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42
3	107319102	183337:1	G	G[3:107321486[	85	PASS	EVDNC=ASSMB;INSERTION=AAAAT;MAPQ=60;MATEID=183337:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_107310001_107335001_68C;SPAN=2384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:21:7.8:85.8,7.8,0:28:0:-85.82:85.82
3	107321486	183337:2	G	]3:107319102]G	85	PASS	EVDNC=ASSMB;INSERTION=AAAAT;MAPQ=60;MATEID=183337:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_107310001_107335001_68C;SPAN=2384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:21:7.8:85.8,7.8,0:28:0:-85.82:85.82
3	108262809	183955:1	A	[3:109509118[A	20	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=183955:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:108262809(-)-3:109509118(-)__3_109490501_109515501D;SPAN=1246309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
3	108561275	183679:1	G	]3:108624761]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=183679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_108608501_108633501_41C;SPAN=63486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:17:4.8:52.8,4.8,0:18:0:-52.81:52.81
3	108571285	183658:1	A	]3:108599231]A	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=183658:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_108559501_108584501_45C;SPAN=27946;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:9:8:-41.77:41.77
3	108599231	183658:2	T	T[3:108571285[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=183658:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_108559501_108584501_45C;SPAN=27946;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:9:8:-41.77:41.77
3	108624761	183679:2	G	G[3:108561275[	52	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=183679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_108608501_108633501_41C;SPAN=63486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:17:4.8:52.8,4.8,0:18:0:-52.81:52.81
3	109509118	183955:2	T	[3:108262809[T	20	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=183955:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:108262809(-)-3:109509118(-)__3_109490501_109515501D;SPAN=1246309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
3	110032910	350614:1	A	[6:77939704[A	47	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=350614:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_77934501_77959501_20C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:8:9:-49.48:49.48
3	110694547	184409:2	C	C[1:108952236[	89	PASS	EVDNC=ASSMB;INSERTION=TTGCAG;MAPQ=60;MATEID=184409:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_110691001_110716001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:12:8.1:89.1,8.1,0:29:0:-89.12:89.12
3	111555239	475914:1	T	[8:127521585[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=AAAAAAATAAAAAA;MAPQ=60;MATEID=475914:2;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_8_127498001_127523001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:87:45:24.3:267.3,24.3,0:46:56:-267.4:267.4
3	112384218	184910:1	T	T[3:112395203[	26	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=184910:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:112384218(+)-3:112395203(-)__3_112381501_112406501D;SPAN=10985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
3	112395203	184910:2	C	]3:112384218]C	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=184910:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:112384218(+)-3:112395203(-)__3_112381501_112406501D;SPAN=10985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
3	113481549	185291:1	A	]3:113597111]A	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=185291:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_113582001_113607001_18C;SPAN=115562;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
3	113597111	185291:2	C	C[3:113481549[	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=185291:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_113582001_113607001_18C;SPAN=115562;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
3	114574669	185573:1	A	A[3:114647553[	19	PASS	EVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=185573:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_114635501_114660501_3C;SPAN=72884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89
3	114647553	185573:2	A	]3:114574669]A	19	PASS	EVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=185573:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_114635501_114660501_3C;SPAN=72884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89
3	116391306	186143:1	G	G[3:116836522[	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=186143:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_116816001_116841001_39C;SPAN=445216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:9:0.8:20.6,0,0.8:6:4:-21.46:21.46
3	116556437	186069:1	G	G[3:116556749[	21	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATCTTCAG;MAPQ=60;MATEID=186069:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_116546501_116571501_32C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:8:0:-21.35:21.36
3	116556749	186069:2	A	]3:116556437]A	21	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATCTTCAG;MAPQ=60;MATEID=186069:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_116546501_116571501_32C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:8:0:-21.35:21.36
3	116836522	186143:2	A	]3:116391306]A	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=186143:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_116816001_116841001_39C;SPAN=445216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:9:0.8:20.6,0,0.8:6:4:-21.46:21.46
3	120222955	187040:1	A	]3:120223088]A	77	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=187040:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_120221501_120246501_22C;SPAN=133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:55:60.5:77,0,60.5:28:0:-77.06:77.06
3	120223088	187040:2	T	T[3:120222955[	77	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=187040:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_120221501_120246501_22C;SPAN=133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:55:60.5:77,0,60.5:28:0:-77.06:77.06
3	122934047	187839:1	A	]12:49498997]A	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=187839:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:122934047(-)-12:49498997(+)__3_122916501_122941501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
3	124690602	188279:1	G	[20:47378938[G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=188279:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_124680501_124705501_76C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:7:12:-50.34:50.34
3	125089786	188472:1	T	[Un_KN707699v1_decoy:1[T	85	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=188472:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_125072501_125097501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:11:7.8:85.8,7.8,0:28:0:-85.82:85.82
3	125217451	188523:1	T	T[3:125218320[	38	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=188523:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_125195001_125220001_17C;SPAN=869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
3	125218320	188523:2	G	]3:125217451]G	38	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=188523:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_125195001_125220001_17C;SPAN=869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
3	125720746	188658:1	G	]3:125743434]G	26	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=188658:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:125720746(-)-3:125743434(+)__3_125709501_125734501D;SPAN=22688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
3	125743434	188658:2	A	A[3:125720746[	26	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=188658:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:125720746(-)-3:125743434(+)__3_125709501_125734501D;SPAN=22688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
3	126640095	189005:1	T	T[3:126640407[	35	PASS	EVDNC=ASSMB;HOMSEQ=GCTGCTTGTGTTTTCT;MAPQ=60;MATEID=189005:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_126616001_126641001_28C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	126640407	189005:2	G	]3:126640095]G	35	PASS	EVDNC=ASSMB;HOMSEQ=GCTGCTTGTGTTTTCT;MAPQ=60;MATEID=189005:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_126616001_126641001_28C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	128140300	987204:1	C	]Un_KN707627v1_decoy:5821]C	56	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=987204:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_478_1_5821_13C;SPAN=-1;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11
3	128657391	611288:1	C	[11:129051675[C	17	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GGCTGGG;MAPQ=60;MATEID=611288:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_129041501_129066501_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:4:3:-17.77:17.94
3	130044539	189911:1	C	C[3:130087903[	72	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=189911:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_130070501_130095501_18C;SPAN=43364;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62
3	130080581	189909:2	C	]3:75414219]C	49	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=189909:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414219(+)-3:130080581(-)__3_130070501_130095501D;SPAN=54666362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51
3	130087903	189911:2	A	]3:130044539]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=189911:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_130070501_130095501_18C;SPAN=43364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62
3	130167162	189995:1	T	T[12:8307812[	23	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=189995:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167162(+)-12:8307812(-)__3_130144001_130169001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11
3	130167390	614848:1	C	]12:8308047]C	22	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=614848:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167390(-)-12:8308047(+)__12_8305501_8330501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
3	131958971	190506:1	T	T[3:131959300[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATACACCTTTCT;MAPQ=60;MATEID=190506:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_131957001_131982001_39C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:59:29.6:29.6,0,118.7:11:6:-29.63:32.66
3	131959300	190506:2	G	]3:131958971]G	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATACACCTTTCT;MAPQ=60;MATEID=190506:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_131957001_131982001_39C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:59:29.6:29.6,0,118.7:11:6:-29.63:32.66
3	131989409	190518:1	T	T[3:131994541[	62	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TG;INSERTION=TCTCATATCTGTTTTCCTGGTAGAATACAGCACCATGAGGGTAGGACTCT;MAPQ=60;MATEID=190518:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5132;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:21:5.7:62.7,5.7,0:21:0:-62.72:62.72
3	131989515	190519:1	C	[3:131994541[C	59	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TG;MAPQ=60;MATEID=190519:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5026;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:20:5.4:59.4,5.4,0:17:7:-59.41:59.41
3	131994541	190518:2	T	]3:131989409]T	62	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TG;INSERTION=TCTCATATCTGTTTTCCTGGTAGAATACAGCACCATGAGGGTAGGACTCT;MAPQ=60;MATEID=190518:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5132;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:21:5.7:62.7,5.7,0:21:0:-62.72:62.72
3	131994541	190519:2	T	[3:131989515[T	59	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TG;MAPQ=60;MATEID=190519:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5026;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:20:5.4:59.4,5.4,0:17:7:-59.41:59.41
3	132270290	190645:1	G	G[3:132276206[	29	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=190645:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:132270290(+)-3:132276206(-)__3_132275501_132300501D;SPAN=5916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71
3	132276206	190645:2	A	]3:132270290]A	29	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=190645:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:132270290(+)-3:132276206(-)__3_132275501_132300501D;SPAN=5916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71
3	133884925	191035:1	A	]3:133885105]A	8	PASS	EVDNC=ASSMB;HOMSEQ=ACCAGAGGATGGGGGACTCACACACC;MAPQ=60;MATEID=191035:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_133868001_133893001_0C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:30:8:8,0,67.4:5:0:-8.072:10.8
3	133885105	191035:2	C	C[3:133884925[	8	PASS	EVDNC=ASSMB;HOMSEQ=ACCAGAGGATGGGGGACTCACACACC;MAPQ=60;MATEID=191035:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_133868001_133893001_0C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:30:8:8,0,67.4:5:0:-8.072:10.8
3	136302171	191628:1	C	C[3:136307358[	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=191628:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_136293501_136318501_36C;SPAN=5187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:19:7.2:79.2,7.2,0:17:19:-79.22:79.22
3	136307358	191628:2	T	]3:136302171]T	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=191628:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_136293501_136318501_36C;SPAN=5187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:19:7.2:79.2,7.2,0:17:19:-79.22:79.22
3	137595612	192027:1	T	T[3:137597601[	59	PASS	EVDNC=ASSMB;INSERTION=TATCTCTGCGCC;MAPQ=60;MATEID=192027:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_137592001_137617001_25C;SPAN=1989;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
3	137597601	192027:2	C	]3:137595612]C	59	PASS	EVDNC=ASSMB;INSERTION=TATCTCTGCGCC;MAPQ=60;MATEID=192027:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_137592001_137617001_25C;SPAN=1989;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
3	139885156	234286:1	A	A]4:65936763]	75	PASS	DISC_MAPQ=9;EVDNC=ASDIS;INSERTION=GG;MAPQ=31;MATEID=234286:2;MATENM=0;NM=12;NUMPARTS=2;SCTG=c_4_65929501_65954501_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:21:4:-75.92:75.92
3	140825566	192860:1	T	T[3:140828201[	31	PASS	EVDNC=ASSMB;HOMSEQ=CCACT;MAPQ=60;MATEID=192860:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_140826001_140851001_38C;SPAN=2635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06
3	140828201	192860:2	C	]3:140825566]C	31	PASS	EVDNC=ASSMB;HOMSEQ=CCACT;MAPQ=60;MATEID=192860:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_140826001_140851001_38C;SPAN=2635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06
3	144071898	193746:1	T	]3:144089433]T	41	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=193746:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_144084501_144109501_46C;SPAN=17535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:8:8:-42.92:42.92
3	144089433	193746:2	T	T[3:144071898[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=193746:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_144084501_144109501_46C;SPAN=17535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:8:8:-42.92:42.92
3	146015409	194390:1	C	]3:146015560]C	34	PASS	EVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=194390:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_145995501_146020501_107C;SPAN=151;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12
3	146015560	194390:2	T	T[3:146015409[	34	PASS	EVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=194390:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_145995501_146020501_107C;SPAN=151;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12
3	146088175	203693:1	C	]3:172347176]C	25	PASS	EVDNC=ASSMB;HOMSEQ=CAGT;MAPQ=60;MATEID=203693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_172333001_172358001_99C;SPAN=26259001;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66
3	146667403	194657:1	A	A[3:146677075[	65	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=194657:2;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_3_146657001_146682001_118C;SPAN=9672;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82
3	146672618	194660:1	A	]3:146677378]A	99	PASS	EVDNC=ASSMB;INSERTION=ATTGGGGAG;MAPQ=60;MATEID=194660:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_146657001_146682001_45C;SPAN=4760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:29:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	146677075	194657:2	C	]3:146667403]C	65	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=194657:1;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_3_146657001_146682001_118C;SPAN=9672;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82
3	146677378	194660:2	A	A[3:146672618[	99	PASS	EVDNC=ASSMB;INSERTION=ATTGGGGAG;MAPQ=60;MATEID=194660:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_146657001_146682001_45C;SPAN=4760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:29:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	148563653	195155:1	G	G[3:148567640[	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=195155:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_3_148543501_148568501_31C;SPAN=3987;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:25:12:132,12,0:43:0:-132:132
3	148567640	195155:2	A	]3:148563653]A	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=195155:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_3_148543501_148568501_31C;SPAN=3987;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:25:12:132,12,0:43:0:-132:132
3	148761366	195224:1	C	C]3:148781756]	82	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=195224:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761366(+)-3:148781756(+)__3_148739501_148764501D;SPAN=20390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52
3	148761604	195225:1	A	[3:148781404[A	35	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=195225:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761604(-)-3:148781404(-)__3_148739501_148764501D;SPAN=19800;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78
3	148781404	195225:2	T	[3:148761604[T	35	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=195225:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761604(-)-3:148781404(-)__3_148739501_148764501D;SPAN=19800;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78
3	148781756	195224:2	A	A]3:148761366]	82	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=195224:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761366(+)-3:148781756(+)__3_148739501_148764501D;SPAN=20390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52
3	148849015	195256:1	T	T[3:148849324[	99	PASS	EVDNC=ASSMB;HOMSEQ=AGACCTCTTT;MAPQ=60;MATEID=195256:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_148837501_148862501_66C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:22:9.9:108.9,9.9,0:36:0:-108.9:108.9
3	148849324	195256:2	A	]3:148849015]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AGACCTCTTT;MAPQ=60;MATEID=195256:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_148837501_148862501_66C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:22:9.9:108.9,9.9,0:36:0:-108.9:108.9
3	149126599	195347:1	A	A[3:149126914[	27	PASS	EVDNC=ASSMB;HOMSEQ=AAGATGCAAAAATA;MAPQ=60;MATEID=195347:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149107001_149132001_114C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77
3	149126914	195347:2	A	]3:149126599]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AAGATGCAAAAATA;MAPQ=60;MATEID=195347:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149107001_149132001_114C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77
3	149550689	195535:1	A	A[3:149552360[	85	PASS	EVDNC=ASSMB;HOMSEQ=AGGGA;MAPQ=60;MATEID=195535:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149548001_149573001_52C;SPAN=1671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
3	149552360	195535:2	A	]3:149550689]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AGGGA;MAPQ=60;MATEID=195535:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149548001_149573001_52C;SPAN=1671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
3	152031061	205410:1	G	G]3:176727181]	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=205410:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_176718501_176743501_72C;SPAN=24696120;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:23:11:-89.12:89.12
3	152593949	196598:1	T	T[3:152595367[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGGTCACTGTTT;MAPQ=60;MATEID=196598:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152586001_152611001_23C;SPAN=1418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:44:2.4:115.5,2.4,0:38:0:-120.7:120.7
3	152595367	196598:2	A	]3:152593949]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGGTCACTGTTT;MAPQ=60;MATEID=196598:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152586001_152611001_23C;SPAN=1418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:44:2.4:115.5,2.4,0:38:0:-120.7:120.7
3	152899403	196720:1	T	T[3:152899593[	5	PASS	EVDNC=ASSMB;INSERTION=AGCTAGGTA;MAPQ=60;MATEID=196720:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152880001_152905001_13C;SPAN=190;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
3	152899593	196720:2	T	]3:152899403]T	5	PASS	EVDNC=ASSMB;INSERTION=AGCTAGGTA;MAPQ=60;MATEID=196720:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152880001_152905001_13C;SPAN=190;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
3	155693184	197706:1	T	T[3:155693494[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAGCACAGACTT;MAPQ=60;MATEID=197706:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_155673001_155698001_87C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:23:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	155693494	197706:2	A	]3:155693184]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAGCACAGACTT;MAPQ=60;MATEID=197706:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_155673001_155698001_87C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:23:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	158399128	198545:1	T	T[3:158399456[	9	PASS	EVDNC=ASSMB;HOMSEQ=CTATTATTTCCTTTTT;MAPQ=60;MATEID=198545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158392501_158417501_63C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:156:9.1:9.1,0,382.1:16:0:-8.966:30.94
3	158399456	198545:2	C	]3:158399128]C	9	PASS	EVDNC=ASSMB;HOMSEQ=CTATTATTTCCTTTTT;MAPQ=60;MATEID=198545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158392501_158417501_63C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:156:9.1:9.1,0,382.1:16:0:-8.966:30.94
3	158632951	198663:1	C	C[3:158634123[	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=198663:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158613001_158638001_13C;SPAN=1172;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:43:20.9:20.9,0,86.9:10:0:-20.92:23.23
3	158634123	198663:2	C	]3:158632951]C	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=198663:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158613001_158638001_13C;SPAN=1172;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:43:20.9:20.9,0,86.9:10:0:-20.92:23.23
3	158729656	198943:1	C	]3:159791445]C	47	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=198943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_159789001_159814001_25C;SPAN=1061789;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:13:10:-46.91:46.91
3	158733071	198708:1	C	]3:158737844]C	56	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=198708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158735501_158760501_49C;SPAN=4773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:36:32.9:56,0,32.9:14:16:-56.16:56.16
3	158737844	198708:2	A	A[3:158733071[	56	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=198708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158735501_158760501_49C;SPAN=4773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:36:32.9:56,0,32.9:14:16:-56.16:56.16
3	159306188	198837:1	T	]3:159306326]T	43	PASS	EVDNC=ASSMB;HOMSEQ=TAATAAC;MAPQ=60;MATEID=198837:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_159299001_159324001_42C;SPAN=138;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:68:43.7:43.7,0,126.2:19:0:-43.61:45.9
3	159306326	198837:2	C	C[3:159306188[	43	PASS	EVDNC=ASSMB;HOMSEQ=TAATAAC;MAPQ=60;MATEID=198837:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_159299001_159324001_42C;SPAN=138;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:68:43.7:43.7,0,126.2:19:0:-43.61:45.9
3	159791445	198943:2	T	T[3:158729656[	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=198943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_159789001_159814001_25C;SPAN=1061789;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:13:10:-46.91:46.91
3	161025129	199594:1	T	]3:161713703]T	55	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=199594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161700001_161725001_21C;SPAN=688574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:37:35.9:55.7,0,35.9:20:0:-55.81:55.81
3	161528940	199540:1	T	T[3:161529260[	99	PASS	EVDNC=ASSMB;HOMSEQ=AGAATGTGTCATTCCT;MAPQ=60;MATEID=199540:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161528501_161553501_66C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:36:11.7:128.7,11.7,0:42:0:-128.7:128.7
3	161529260	199540:2	A	]3:161528940]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AGAATGTGTCATTCCT;MAPQ=60;MATEID=199540:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161528501_161553501_66C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:36:11.7:128.7,11.7,0:42:0:-128.7:128.7
3	161569425	199605:1	C	]3:161742789]C	24	PASS	EVDNC=ASSMB;INSERTION=CCTCA;MAPQ=60;MATEID=199605:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_161724501_161749501_109C;SPAN=173364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
3	161713703	199594:2	A	A[3:161025129[	55	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=199594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161700001_161725001_21C;SPAN=688574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:37:35.9:55.7,0,35.9:20:0:-55.81:55.81
3	161742789	199605:2	A	A[3:161569425[	24	PASS	EVDNC=ASSMB;INSERTION=CCTCA;MAPQ=60;MATEID=199605:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_161724501_161749501_109C;SPAN=173364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
3	162690522	200063:1	T	T[3:162690825[	17	PASS	EVDNC=ASSMB;HOMSEQ=TATGTTTCTGTTTT;MAPQ=60;MATEID=200063:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_162680001_162705001_149C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:8:0:-17.98:19.13
3	162690825	200063:2	T	]3:162690522]T	17	PASS	EVDNC=ASSMB;HOMSEQ=TATGTTTCTGTTTT;MAPQ=60;MATEID=200063:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_162680001_162705001_149C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:8:0:-17.98:19.13
3	162827575	200142:1	G	[3:162829871[G	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=200142:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_162827001_162852001_35C;SPAN=2296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:35:29.9:29.9,0,56.3:9:7:-29.77:30.28
3	162829871	200142:2	A	[3:162827575[A	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=200142:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_162827001_162852001_35C;SPAN=2296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:35:29.9:29.9,0,56.3:9:7:-29.77:30.28
3	163047113	200254:1	T	T[3:163051297[	34	PASS	EVDNC=ASSMB;INSERTION=GT;MAPQ=60;MATEID=200254:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_163047501_163072501_40C;SPAN=4184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
3	163051297	200254:2	A	]3:163047113]A	34	PASS	EVDNC=ASSMB;INSERTION=GT;MAPQ=60;MATEID=200254:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_163047501_163072501_40C;SPAN=4184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
3	163386382	200395:1	G	G[Un_KN707713v1_decoy:1[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=200395:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_163366001_163391001_33C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:26:10.2:112.2,10.2,0:37:0:-112.2:112.2
3	163386382	988285:1	G	G[Un_KN707713v1_decoy:1[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_564_1_1308_4C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:11:9.6:105.6,9.6,0:35:0:-105.6:105.6
3	165861102	283092:1	G	]5:26230726]G	39	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=283092:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:165861102(-)-5:26230726(+)__5_26215001_26240001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:0:13:-39.61:39.61
3	166722402	201766:1	C	[5:51925610[C	57	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=201766:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:166722402(-)-5:51925610(-)__3_166698001_166723001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:31:17.9:57.5,0,17.9:0:20:-58.24:58.24
3	170401792	203025:1	A	A[3:170402090[	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAAAAACTAAATAATA;MAPQ=60;MATEID=203025:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_170397501_170422501_40C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:67:25:18.6:204.6,18.6,0:46:26:-204.7:204.7
3	170402090	203025:2	A	]3:170401792]A	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAAAACTAAATAATA;MAPQ=60;MATEID=203025:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_170397501_170422501_40C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:67:25:18.6:204.6,18.6,0:46:26:-204.7:204.7
3	172347176	203693:2	T	T[3:146088175[	25	PASS	EVDNC=ASSMB;HOMSEQ=CAGT;MAPQ=60;MATEID=203693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_172333001_172358001_99C;SPAN=26259001;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66
3	174952168	204975:1	C	]3:175621829]C	70	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=204975:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175616001_175641001_58C;SPAN=669661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:24:0:-73.47:73.47
3	175307660	204822:1	C	C[3:175421297[	31	PASS	EVDNC=ASSMB;HOMSEQ=CAGC;MAPQ=60;MATEID=204822:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175420001_175445001_37C;SPAN=113637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:13:0:-31.39:32.26
3	175421297	204822:2	C	]3:175307660]C	31	PASS	EVDNC=ASSMB;HOMSEQ=CAGC;MAPQ=60;MATEID=204822:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175420001_175445001_37C;SPAN=113637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:13:0:-31.39:32.26
3	175448963	204886:1	G	G[3:175512033[	17	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=204886:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175493501_175518501_16C;SPAN=63070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63
3	175512033	204886:2	T	]3:175448963]T	17	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=204886:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175493501_175518501_16C;SPAN=63070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63
3	175621829	204975:2	C	C[3:174952168[	70	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=204975:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175616001_175641001_58C;SPAN=669661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:24:0:-73.47:73.47
3	176102403	205151:1	G	]3:176102572]G	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=205151:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_176081501_176106501_72C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:55:34.1:34.1,0,103.4:15:0:-34.06:36.05
3	176102572	205151:2	C	C[3:176102403[	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=205151:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_176081501_176106501_72C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:55:34.1:34.1,0,103.4:15:0:-34.06:36.05
3	176189690	916262:1	C	]22:28669436]C	6	PASS	EVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=916262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_73C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:105:6.8:6.8,0,257.6:11:0:-6.796:21.38
3	176434607	205326:1	A	]3:176444476]A	99	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=205326:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_176424501_176449501_53C;SPAN=9869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:46:13.7:99.5,0,13.7:34:0:-102.7:102.7
3	176444476	205326:2	A	A[3:176434607[	99	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=205326:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_176424501_176449501_53C;SPAN=9869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:46:13.7:99.5,0,13.7:34:0:-102.7:102.7
3	176727181	205410:2	A	A]3:152031061]	89	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=38;MATEID=205410:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_176718501_176743501_72C;SPAN=24696120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:23:11:-89.12:89.12
3	177122919	371708:1	C	C[6:153202309[	92	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=371708:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:177122919(+)-6:153202309(-)__6_153198501_153223501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:6:8.4:92.4,8.4,0:0:31:-92.42:92.42
3	177126512	371709:1	T	T[6:153202067[	69	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATC;INSERTION=T;MAPQ=60;MATEID=371709:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
3	178832345	206192:1	C	C[3:178833084[	95	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=206192:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_178825501_178850501_51C;SPAN=739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:15:8.7:95.7,8.7,0:32:0:-95.72:95.72
3	178833084	206192:2	G	]3:178832345]G	95	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=206192:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_178825501_178850501_51C;SPAN=739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:15:8.7:95.7,8.7,0:32:0:-95.72:95.72
3	178849865	206201:1	A	A[3:178850556[	79	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206201:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_178850001_178875001_90C;SPAN=691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:18:7.2:79.2,7.2,0:26:0:-79.22:79.22
3	178850556	206201:2	A	]3:178849865]A	79	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206201:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_178850001_178875001_90C;SPAN=691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:18:7.2:79.2,7.2,0:26:0:-79.22:79.22
3	178965525	206219:1	A	A[3:178965814[	25	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_178948001_178973001_1C;SPAN=289;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:40:25.1:25.1,0,74.6:11:0:-25.07:26.48
3	178965814	206219:2	A	]3:178965525]A	25	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_178948001_178973001_1C;SPAN=289;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:40:25.1:25.1,0,74.6:11:0:-25.07:26.48
3	179936553	206454:1	C	C[3:179937017[	82	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=206454:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_179928001_179953001_81C;SPAN=464;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:27:7.5:82.5,7.5,0:27:0:-82.52:82.52
3	179937017	206454:2	T	]3:179936553]T	82	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=206454:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_179928001_179953001_81C;SPAN=464;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:27:7.5:82.5,7.5,0:27:0:-82.52:82.52
3	182153134	207028:1	C	]3:182153263]C	94	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=207028:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182133001_182158001_26C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:65:67.7:94.1,0,67.7:34:0:-94.15:94.15
3	182153263	207028:2	A	A[3:182153134[	94	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=207028:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182133001_182158001_26C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:65:67.7:94.1,0,67.7:34:0:-94.15:94.15
3	182830325	207207:1	A	]3:182975990]A	30	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=207207:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182966001_182991001_41C;SPAN=145665;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:7:10:-30.82:30.82
3	182975990	207207:2	A	A[3:182830325[	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=207207:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182966001_182991001_41C;SPAN=145665;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:7:10:-30.82:30.82
3	183712226	560853:1	T	T[10:94531640[	23	PASS	EVDNC=ASSMB;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTT;MAPQ=60;MATEID=560853:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_10_94521001_94546001_53C;SECONDARY;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
3	184159056	207741:1	G	G[3:184159616[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTG;MAPQ=60;MATEID=207741:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_184142001_184167001_71C;SPAN=560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:11:8:-41.77:41.77
3	184159616	207741:2	G	]3:184159056]G	41	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTG;MAPQ=60;MATEID=207741:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_184142001_184167001_71C;SPAN=560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:11:8:-41.77:41.77
3	185432358	110651:2	T	]2:128082406]T	66	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TTTTTGTGTTTTTAGTAGAGACAGGGTTTCAC;MAPQ=33;MATEID=110651:1;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_2_128061501_128086501_81C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:13:6:66,6,0:18:9:-66.02:66.02
3	185794263	208397:1	G	G[3:185794490[	35	PASS	EVDNC=ASSMB;INSERTION=GGGATCACAGAGC;MAPQ=60;MATEID=208397:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_3_185783501_185808501_121C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	185794490	208397:2	C	]3:185794263]C	35	PASS	EVDNC=ASSMB;INSERTION=GGGATCACAGAGC;MAPQ=60;MATEID=208397:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_3_185783501_185808501_121C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	186858374	482537:1	T	[8:143618862[T	52	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=482537:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143619001_143644001_92C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:1:4.8:52.8,4.8,0:13:9:-52.81:52.81
3	186863244	208824:1	G	G[3:186867496[	86	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATATTGCAAATAG;MAPQ=60;MATEID=208824:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_186861501_186886501_57C;SPAN=4252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98
3	186867496	208824:2	G	]3:186863244]G	86	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATATTGCAAATAG;MAPQ=60;MATEID=208824:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_186861501_186886501_57C;SPAN=4252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98
3	187108877	208922:1	T	T[3:187109182[	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATTTGTT;MAPQ=60;MATEID=208922:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_187106501_187131501_36C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:25:8.1:89.1,8.1,0:23:6:-89.12:89.12
3	187109182	208922:2	A	]3:187108877]A	89	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAAATTTGTT;MAPQ=60;MATEID=208922:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_187106501_187131501_36C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:25:8.1:89.1,8.1,0:23:6:-89.12:89.12
3	188357984	209436:1	A	]3:188394904]A	29	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=209436:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_188380501_188405501_6C;SPAN=36920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
3	188394904	209436:2	T	T[3:188357984[	29	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=209436:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_188380501_188405501_6C;SPAN=36920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
3	190019559	210058:1	A	A[3:190022736[	66	PASS	EVDNC=ASSMB;HOMSEQ=CTCA;MAPQ=60;MATEID=210058:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190022001_190047001_21C;SPAN=3177;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:14:6:66,6,0:22:0:-66.02:66.02
3	190022736	210058:2	C	]3:190019559]C	66	PASS	EVDNC=ASSMB;HOMSEQ=CTCA;MAPQ=60;MATEID=210058:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190022001_190047001_21C;SPAN=3177;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:14:6:66,6,0:22:0:-66.02:66.02
3	190237631	210179:1	T	T[3:190237921[	48	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTGTTTTTT;MAPQ=60;MATEID=210179:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190218001_190243001_78C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77
3	190237921	210179:2	C	]3:190237631]C	48	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTGTTTTTT;MAPQ=60;MATEID=210179:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190218001_190243001_78C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77
3	190572861	210321:1	T	T[3:190573148[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATGCTTTGTT;MAPQ=60;MATEID=210321:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_190561001_190586001_38C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:7:7:-39.01:39.01
3	190573148	210321:2	A	]3:190572861]A	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATGCTTTGTT;MAPQ=60;MATEID=210321:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_190561001_190586001_38C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:7:7:-39.01:39.01
3	190952018	210426:1	A	A[3:190952332[	85	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAGTGTA;MAPQ=60;MATEID=210426:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_3_190928501_190953501_0C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:28:7.8:85.8,7.8,0:26:0:-85.43:85.43
3	190952332	210426:2	A	]3:190952018]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAGTGTA;MAPQ=60;MATEID=210426:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_3_190928501_190953501_0C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:28:7.8:85.8,7.8,0:26:0:-85.43:85.43
3	190978865	210444:1	C	C[3:190979149[	43	PASS	EVDNC=ASSMB;HOMSEQ=ATATAAATTACCC;MAPQ=60;MATEID=210444:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_190977501_191002501_1C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
3	190979149	210444:2	A	]3:190978865]A	43	PASS	EVDNC=ASSMB;HOMSEQ=ATATAAATTACCC;MAPQ=60;MATEID=210444:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_190977501_191002501_1C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
3	192345405	211008:1	A	A[3:192345703[	85	PASS	EVDNC=ASSMB;HOMSEQ=AAGATATAACATA;MAPQ=60;MATEID=211008:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_192325001_192350001_16C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
3	192345703	211008:2	A	]3:192345405]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AAGATATAACATA;MAPQ=60;MATEID=211008:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_192325001_192350001_16C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
3	193059075	211257:1	T	T[3:193064810[	49	PASS	EVDNC=ASSMB;HOMSEQ=TTTGT;MAPQ=60;MATEID=211257:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193060001_193085001_76C;SPAN=5735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51
3	193064810	211257:2	T	]3:193059075]T	49	PASS	EVDNC=ASSMB;HOMSEQ=TTTGT;MAPQ=60;MATEID=211257:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193060001_193085001_76C;SPAN=5735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51
3	193473457	211437:1	T	]3:193543259]T	69	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=211437:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193525501_193550501_36C;SPAN=69802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
3	193543259	211437:2	T	T[3:193473457[	69	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=211437:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193525501_193550501_36C;SPAN=69802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
3	194569581	211821:1	C	C[3:194569800[	16	PASS	EVDNC=ASSMB;HOMSEQ=CAGGAATTCGAGACCAGCCTGACCAAC;MAPQ=60;MATEID=211821:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194554501_194579501_37C;SPAN=219;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
3	194569800	211821:2	C	]3:194569581]C	16	PASS	EVDNC=ASSMB;HOMSEQ=CAGGAATTCGAGACCAGCCTGACCAAC;MAPQ=60;MATEID=211821:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194554501_194579501_37C;SPAN=219;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
3	194663426	211869:1	C	C[3:194663749[	67	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCTGCCTCAGAGAAAGCCTTTCCCTTCTTC;MAPQ=60;MATEID=211869:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_194652501_194677501_173C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:32:11:67.1,0,11:16:8:-68.92:68.92
3	194663749	211869:2	C	]3:194663426]C	67	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCTGCCTCAGAGAAAGCCTTTCCCTTCTTC;MAPQ=60;MATEID=211869:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_194652501_194677501_173C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:32:11:67.1,0,11:16:8:-68.92:68.92
3	194678016	211879:1	C	C[3:194679562[	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=211879:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:194678016(+)-3:194679562(-)__3_194677001_194702001D;SPAN=1546;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:0:11:-29.57:29.57
3	194679562	211879:2	A	]3:194678016]A	29	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=211879:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:194678016(+)-3:194679562(-)__3_194677001_194702001D;SPAN=1546;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:0:11:-29.57:29.57
3	194822565	211925:1	G	G[3:194825528[	39	PASS	EVDNC=ASSMB;HOMSEQ=GGTG;MAPQ=60;MATEID=211925:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_168C;SPAN=2963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77
3	194822581	211927:1	C	]3:194825702]C	50	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=211927:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_194824001_194849001_105C;SPAN=3121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01
3	194825528	211925:2	G	]3:194822565]G	39	PASS	EVDNC=ASSMB;HOMSEQ=GGTG;MAPQ=60;MATEID=211925:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_168C;SPAN=2963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77
3	194825702	211927:2	C	C[3:194822581[	50	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=211927:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_105C;SPAN=3121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01
3	194894010	211954:1	T	T[3:194894311[	58	PASS	EVDNC=ASSMB;HOMSEQ=CTATGCGCTCTTTCTT;MAPQ=60;MATEID=211954:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_194873001_194898001_35C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
3	194894311	211954:2	C	]3:194894010]C	58	PASS	EVDNC=ASSMB;HOMSEQ=CTATGCGCTCTTTCTT;MAPQ=60;MATEID=211954:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_194873001_194898001_35C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
3	195886346	883494:1	C	[20:48827701[C	1	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=CTACTT;MAPQ=60;MATEID=883494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48804001_48829001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:55:1.1:1.1,0,136.4:3:3:-1.045:9.394
3	196523895	213005:1	C	C[3:196524559[	21	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=213005:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_196514501_196539501_24C;SPAN=664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:66:21.2:21.2,0,143.3:12:0:-21.06:26.43
3	196524559	213005:2	C	]3:196523895]C	21	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=213005:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_196514501_196539501_24C;SPAN=664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:66:21.2:21.2,0,143.3:12:0:-21.06:26.43
3	196591623	213057:1	T	[11:45377756[T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=213057:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_196588001_196613001_28C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:15:12.6:138.6,12.6,0:44:7:-138.6:138.6
3	196602062	213065:1	A	A[3:196602380[	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCA;MAPQ=60;MATEID=213065:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_196588001_196613001_4C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:70:3:0,3,181.5:5:0:3.171:8.849
3	196602380	213065:2	G	]3:196602062]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCA;MAPQ=60;MATEID=213065:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_196588001_196613001_4C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:70:3:0,3,181.5:5:0:3.171:8.849
3	197032518	213254:1	G	G[3:197033039[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTTGCTGACTGGTTGGGG;MAPQ=60;MATEID=213254:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_197029001_197054001_99C;SPAN=521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:8:7:-39.11:39.25
3	197033039	213254:2	C	]3:197032518]C	39	PASS	DISC_MAPQ=14;EVDNC=ASDIS;HOMSEQ=CTCTTGCTGACTGGTTGGGG;MAPQ=23;MATEID=213254:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_197029001_197054001_99C;SPAN=521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:8:7:-39.11:39.25
3	197384100	213329:1	A	]3:197384470]A	99	PASS	DISC_MAPQ=53;EVDNC=ASDIS;INSERTION=TATCCGTAGTGTATTTGCGAG;MAPQ=60;MATEID=213329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_197372001_197397001_24C;SPAN=370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:104:99:122.6,0,139.1:43:8:-122.6:122.7
3	197384470	213329:2	C	C[3:197384100[	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TATCCGTAGTGTATTTGCGAG;MAPQ=60;MATEID=213329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_197372001_197397001_24C;SPAN=370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:104:99:122.6,0,139.1:43:8:-122.6:122.7
3	197384611	213342:1	T	T[3:197389970[	67	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GATAGTTTACTATCTGTAGTGCATTTGGGATAGT;INSERTION=GTCTGCACCACAT;MAPQ=60;MATEID=213342:2;MATENM=4;NM=7;NUMPARTS=15;SCTG=c_3_197372001_197397001_86C;SPAN=5359;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:112:67.7:67.7,0,212.9:30:0:-67.55:71.82
3	197389970	213342:2	T	]3:197384611]T	67	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GATAGTTTACTATCTGTAGTGCATTTGGGATAGT;INSERTION=GTCTGCACCACAT;MAPQ=60;MATEID=213342:1;MATENM=7;NM=4;NUMPARTS=15;SCTG=c_3_197372001_197397001_86C;SPAN=5359;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:112:67.7:67.7,0,212.9:30:0:-67.55:71.82
3	197390161	213403:1	T	]3:197390694]T	0	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=213403:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:197390161(-)-3:197390694(+)__3_197372001_197397001D;SPAN=533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:116:6:0,6,303.6:0:8:6.199:14.03
3	197390694	213403:2	A	A[3:197390161[	0	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=213403:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:197390161(-)-3:197390694(+)__3_197372001_197397001D;SPAN=533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:116:6:0,6,303.6:0:8:6.199:14.03
3	197391017	213415:1	T	T[3:197391554[	99	PASS	DISC_MAPQ=31;EVDNC=TSI_G;HOMSEQ=CATTTGGGATAGTTTGCTATCTGTAGCACATTTGGGATAGTTT;INSERTION=GCTATCTGTAGCACATTTGGGATAGTTTCCTA;MAPQ=20;MATEID=213415:2;MATENM=2;NM=0;NUMPARTS=4;SCTG=c_3_197372001_197397001_83C;SPAN=537;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:152:99:112.7,0,267.8:42:8:-112.4:116
3	197391554	213415:2	T	]3:197391017]T	99	PASS	DISC_MAPQ=27;EVDNC=TSI_G;HOMSEQ=CATTTGGGATAGTTTGCTATCTGTAGCACATTTGGGATAGTTT;INSERTION=GCTATCTGTAGCACATTTGGGATAGTTTCCTA;MAPQ=31;MATEID=213415:1;MATENM=0;NM=2;NUMPARTS=4;SCTG=c_3_197372001_197397001_83C;SPAN=537;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:152:99:112.7,0,267.8:42:8:-112.4:116
4	127126	213760:1	A	A[4:133267[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=213760:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_122501_147501_96C;SPAN=6141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:4:6:-23.53:23.59
4	133267	213760:2	A	]4:127126]A	23	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=213760:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_122501_147501_96C;SPAN=6141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:4:6:-23.53:23.59
4	152957	562623:1	T	[10:100092116[T	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=562623:2;MATENM=24;NM=0;NUMPARTS=2;SCTG=c_10_100082501_100107501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:5:8:-36.31:36.31
4	270179	213843:1	C	C[4:270450[	62	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTCTCC;MAPQ=60;MATEID=213843:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_269501_294501_49C;SPAN=271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54
4	270450	213843:2	A	]4:270179]A	62	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTCTCC;MAPQ=60;MATEID=213843:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_269501_294501_49C;SPAN=271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54
4	407263	213896:1	G	G[4:407581[	15	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAAGGCGG;MAPQ=60;MATEID=213896:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_392001_417001_70C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24
4	407581	213896:2	A	]4:407263]A	15	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAAGGCGG;MAPQ=60;MATEID=213896:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_392001_417001_70C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24
4	2561244	214587:1	A	A[4:2561536[	4	PASS	EVDNC=ASSMB;HOMSEQ=GCCCAGGCTGGAGTGCAGTGGCGCA;MAPQ=60;MATEID=214587:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_2548001_2573001_13C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:32:4.4:4.4,0,73.7:4:0:-4.209:8.1
4	2561536	214587:2	G	]4:2561244]G	4	PASS	EVDNC=ASSMB;HOMSEQ=GCCCAGGCTGGAGTGCAGTGGCGCA;MAPQ=60;MATEID=214587:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_2548001_2573001_13C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:32:4.4:4.4,0,73.7:4:0:-4.209:8.1
4	3594169	496905:1	A	[9:65437620[A	23	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=496905:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:3594169(-)-9:65437620(-)__9_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
4	3814792	214986:1	T	]4:3815327]T	57	PASS	DISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=TATACCCACTCTATCAGGCTGTACT;MAPQ=60;MATEID=214986:2;MATENM=3;NM=91;NUMPARTS=2;SCTG=c_4_3797501_3822501_110C;SPAN=535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:55:57.2:57.2,0,80.3:18:5:-57.16:57.39
4	3815327	214986:2	T	T[4:3814792[	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATACCCACTCTATCAGGCTGTACT;MAPQ=60;MATEID=214986:1;MATENM=91;NM=3;NUMPARTS=2;SCTG=c_4_3797501_3822501_110C;SPAN=535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:55:57.2:57.2,0,80.3:18:5:-57.16:57.39
4	4129499	215168:1	T	T[4:4130496[	24	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=215168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4129499(+)-4:4130496(-)__4_4116001_4141001D;SPAN=997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:0:9:-24.67:24.67
4	4130496	215168:2	A	]4:4129499]A	24	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=215168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4129499(+)-4:4130496(-)__4_4116001_4141001D;SPAN=997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:0:9:-24.67:24.67
4	4164684	215182:1	T	]4:4170704]T	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=215182:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4164684(-)-4:4170704(+)__4_4165001_4190001D;SPAN=6020;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:16:4.2:46.2,4.2,0:0:15:-46.21:46.21
4	4170704	215182:2	T	T[4:4164684[	46	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=215182:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4164684(-)-4:4170704(+)__4_4165001_4190001D;SPAN=6020;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:16:4.2:46.2,4.2,0:0:15:-46.21:46.21
4	4357811	215279:1	T	]4:4357945]T	30	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=215279:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_4336501_4361501_98C;SPAN=134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:43:30.8:30.8,0,77:13:0:-30.83:31.94
4	4357945	215279:2	C	C[4:4357811[	30	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=215279:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_4336501_4361501_98C;SPAN=134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:43:30.8:30.8,0,77:13:0:-30.83:31.94
4	6003698	215740:1	G	]4:6004494]G	59	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=215740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:6003698(-)-4:6004494(+)__4_6002501_6027501D;SPAN=796;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:18:5.4:59.4,5.4,0:0:20:-59.41:59.41
4	6004494	215740:2	G	G[4:6003698[	59	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=215740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:6003698(-)-4:6004494(+)__4_6002501_6027501D;SPAN=796;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:18:5.4:59.4,5.4,0:0:20:-59.41:59.41
4	6649866	216000:1	A	A[4:6651184[	46	PASS	EVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=216000:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_6639501_6664501_41C;SPAN=1318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:16:4.2:46.2,4.2,0:14:0:-44.69:44.69
4	6651184	216000:2	C	]4:6649866]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=216000:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_6639501_6664501_41C;SPAN=1318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:16:4.2:46.2,4.2,0:14:0:-44.69:44.69
4	7237365	216212:1	T	T[4:7245647[	28	PASS	EVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=216212:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7227501_7252501_105C;SPAN=8282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
4	7245647	216212:2	T	]4:7237365]T	28	PASS	EVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=216212:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7227501_7252501_105C;SPAN=8282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
4	7633785	216329:1	C	C[4:7634126[	16	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=216329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7619501_7644501_96C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92
4	7634126	216329:2	C	]4:7633785]C	16	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=216329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7619501_7644501_96C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92
4	9455471	216861:1	C	C[4:9479875[	29	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=216861:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:9455471(+)-4:9479875(-)__4_9457001_9482001D;SPAN=24404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
4	9479875	216861:2	A	]4:9455471]A	29	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=216861:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:9455471(+)-4:9479875(-)__4_9457001_9482001D;SPAN=24404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
4	10390921	217253:1	G	G[4:10400557[	85	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=217253:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:10390921(+)-4:10400557(-)__4_10388001_10413001D;SPAN=9636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:7:7.8:85.8,7.8,0:0:28:-85.82:85.82
4	10400557	217253:2	A	]4:10390921]A	85	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=217253:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:10390921(+)-4:10400557(-)__4_10388001_10413001D;SPAN=9636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:7:7.8:85.8,7.8,0:0:28:-85.82:85.82
4	10433876	217260:1	T	T[4:10435083[	7	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=217260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_10412501_10437501_24C;SPAN=1207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:22:7.1:7.1,0,46.7:4:0:-7.02:8.809
4	10435083	217260:2	T	]4:10433876]T	7	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=217260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_10412501_10437501_24C;SPAN=1207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:22:7.1:7.1,0,46.7:4:0:-7.02:8.809
4	11598244	217597:1	A	A[4:11598838[	27	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=217597:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_11588501_11613501_22C;SPAN=594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
4	11598838	217597:2	G	]4:11598244]G	27	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=217597:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_11588501_11613501_22C;SPAN=594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
4	17201142	218948:1	T	T[4:17201444[	62	PASS	EVDNC=ASSMB;HOMSEQ=TATCCTTTT;MAPQ=60;MATEID=218948:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_17199001_17224001_8C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72
4	17201444	218948:2	T	]4:17201142]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TATCCTTTT;MAPQ=60;MATEID=218948:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_17199001_17224001_8C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72
4	18278640	219210:1	G	]4:18409168]G	32	PASS	EVDNC=ASSMB;INSERTION=CAATTTCAAGG;MAPQ=60;MATEID=219210:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_18399501_18424501_13C;SPAN=130528;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
4	18409168	219210:2	A	A[4:18278640[	32	PASS	EVDNC=ASSMB;INSERTION=CAATTTCAAGG;MAPQ=60;MATEID=219210:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_18399501_18424501_13C;SPAN=130528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
4	19077842	219355:1	T	T[4:19083928[	0	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCACTGATTTGCTTT;MAPQ=60;MATEID=219355:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_19061001_19086001_22C;SPAN=6086;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:24:1328:99:0,293.7,3934:9:18:294.1:28.04
4	19083928	219355:2	C	]4:19077842]C	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCACTGATTTGCTTT;MAPQ=60;MATEID=219355:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_19061001_19086001_22C;SPAN=6086;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:24:1328:99:0,293.7,3934:9:18:294.1:28.04
4	19519813	219488:2	A	A[1:103230510[	75	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=ATACATACATATATATGTACATACATACATATATA;INSERTION=TATACGTACATACATACATATATACATACATATATACGTACATACATATATATGTACATACATACATACGTACATACATATATATGTACATACATACATATGTACATACATATATATGTACATACATACATAT;MAPQ=60;MATEID=219488:1;MATENM=4;NM=4;NUMPARTS=5;SCTG=c_4_19502001_19527001_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:5:6.9:75.9,6.9,0:24:5:-75.92:75.92
4	20376222	219768:1	A	]4:20636643]A	59	PASS	EVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=219768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20629001_20654001_8C;SPAN=260421;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41
4	20577538	219744:1	G	G[4:20601956[	33	PASS	EVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=219744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20580001_20605001_25C;SPAN=24418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
4	20601956	219744:2	G	]4:20577538]G	33	PASS	EVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=219744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20580001_20605001_25C;SPAN=24418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
4	20636643	219768:2	C	C[4:20376222[	59	PASS	EVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=219768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20629001_20654001_8C;SPAN=260421;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41
4	21159379	219876:1	A	A[4:21165475[	46	PASS	EVDNC=ASSMB;HOMSEQ=AGAAAATTATACTAAA;MAPQ=60;MATEID=219876:2;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_21143501_21168501_4C;SPAN=6096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:15:0:-46.21:46.21
4	21165475	219876:2	A	]4:21159379]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AGAAAATTATACTAAA;MAPQ=60;MATEID=219876:1;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_21143501_21168501_4C;SPAN=6096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:15:0:-46.21:46.21
4	21714832	768310:1	T	]16:63759379]T	62	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTTA;MAPQ=60;MATEID=768310:2;MATENM=10;NM=0;NUMPARTS=2;SCTG=c_16_63749001_63774001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:16:5.7:62.7,5.7,0:19:2:-62.72:62.72
4	22150365	224489:1	C	C[4:36380534[	38	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=224489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150365(+)-4:36380534(-)__4_36358001_36383001D;SPAN=14230169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
4	22150805	224490:1	A	]4:36381031]A	19	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=224490:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150805(-)-4:36381031(+)__4_36358001_36383001D;SPAN=14230226;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
4	25495543	221013:1	G	G[4:25495842[	32	PASS	EVDNC=ASSMB;HOMSEQ=AAAGACAAGTGACAG;MAPQ=60;MATEID=221013:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_25480001_25505001_129C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
4	25495842	221013:2	A	]4:25495543]A	32	PASS	EVDNC=ASSMB;HOMSEQ=AAAGACAAGTGACAG;MAPQ=60;MATEID=221013:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_25480001_25505001_129C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
4	26526697	221392:1	C	C[4:26526935[	42	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=221392:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_26509001_26534001_27C;SPAN=238;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
4	26526935	221392:2	T	]4:26526697]T	42	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=221392:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_26509001_26534001_27C;SPAN=238;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
4	27069532	221525:1	C	]4:27069662]C	26	PASS	EVDNC=ASSMB;INSERTION=TAAAGACTTTG;MAPQ=60;MATEID=221525:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_27048001_27073001_3C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:12:0:-26.4:28.44
4	27069662	221525:2	C	C[4:27069532[	26	PASS	EVDNC=ASSMB;INSERTION=TAAAGACTTTG;MAPQ=60;MATEID=221525:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_27048001_27073001_3C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:12:0:-26.4:28.44
4	28562678	222110:1	C	C[4:28562989[	56	PASS	EVDNC=ASSMB;HOMSEQ=GAAATGAGTAATAC;MAPQ=60;MATEID=222110:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_28542501_28567501_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:21:2.4:56.1,2.4,0:18:0:-57:57
4	28562989	222110:2	G	]4:28562678]G	56	PASS	EVDNC=ASSMB;HOMSEQ=GAAATGAGTAATAC;MAPQ=60;MATEID=222110:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_28542501_28567501_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:21:2.4:56.1,2.4,0:18:0:-57:57
4	31012329	222850:1	T	T[4:31013351[	29	PASS	EVDNC=ASSMB;HOMSEQ=ATGT;MAPQ=60;MATEID=222850:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_30992501_31017501_9C;SPAN=1022;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
4	31013351	222850:2	A	]4:31012329]A	29	PASS	EVDNC=ASSMB;HOMSEQ=ATGT;MAPQ=60;MATEID=222850:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_30992501_31017501_9C;SPAN=1022;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
4	31405064	223003:1	C	C[4:31405383[	10	PASS	EVDNC=ASSMB;HOMSEQ=ATTATTTTC;MAPQ=60;MATEID=223003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31384501_31409501_18C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:68:10.7:10.7,0,159.2:9:0:-10.59:18.47
4	31405383	223003:2	A	]4:31405064]A	10	PASS	EVDNC=ASSMB;HOMSEQ=ATTATTTTC;MAPQ=60;MATEID=223003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31384501_31409501_18C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:68:10.7:10.7,0,159.2:9:0:-10.59:18.47
4	31840145	223216:1	G	]4:31840263]G	8	PASS	EVDNC=ASSMB;INSERTION=ATCTTT;MAPQ=60;MATEID=223216:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31825501_31850501_67C;SPAN=118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:31:8:8,0,67.4:5:0:-7.791:10.72
4	31840263	223216:2	G	G[4:31840145[	8	PASS	EVDNC=ASSMB;INSERTION=ATCTTT;MAPQ=60;MATEID=223216:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31825501_31850501_67C;SPAN=118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:31:8:8,0,67.4:5:0:-7.791:10.72
4	32103898	223291:1	T	]4:32103993]T	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=223291:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_32095001_32120001_79C;SPAN=95;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8
4	32103993	223291:2	C	C[4:32103898[	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=223291:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_32095001_32120001_79C;SPAN=95;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8
4	32964702	223633:1	T	]4:33012312]T	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCATAT;MAPQ=60;MATEID=223633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33001501_33026501_98C;SPAN=47610;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:5:7:-31.35:31.35
4	33012312	223633:2	T	T[4:32964702[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCATAT;MAPQ=60;MATEID=223633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33001501_33026501_98C;SPAN=47610;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:5:7:-31.35:31.35
4	33471797	223751:1	A	A[4:33472122[	49	PASS	EVDNC=ASSMB;HOMSEQ=AAAATCACTGAAATA;MAPQ=60;MATEID=223751:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33467001_33492001_61C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:16:0:-50.34:50.34
4	33472122	223751:2	A	]4:33471797]A	49	PASS	EVDNC=ASSMB;HOMSEQ=AAAATCACTGAAATA;MAPQ=60;MATEID=223751:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33467001_33492001_61C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:16:0:-50.34:50.34
4	34530009	223925:1	C	C[4:34530329[	49	PASS	EVDNC=ASSMB;HOMSEQ=CAGGCCATTCCTTTC;MAPQ=60;MATEID=223925:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_34520501_34545501_89C;SPAN=320;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51
4	34530329	223925:2	C	]4:34530009]C	49	PASS	EVDNC=ASSMB;HOMSEQ=CAGGCCATTCCTTTC;MAPQ=60;MATEID=223925:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_34520501_34545501_89C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51
4	36380534	224489:2	G	]4:22150365]G	38	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=224489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150365(+)-4:36380534(-)__4_36358001_36383001D;SPAN=14230169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
4	36381031	224490:2	C	C[4:22150805[	19	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=224490:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150805(-)-4:36381031(+)__4_36358001_36383001D;SPAN=14230226;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
4	36841138	224648:1	T	T[4:36841468[	31	PASS	EVDNC=ASSMB;HOMSEQ=TGGATGAATCTTCT;MAPQ=60;MATEID=224648:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_36823501_36848501_12C;SPAN=330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
4	36841468	224648:2	T	]4:36841138]T	31	PASS	EVDNC=ASSMB;HOMSEQ=TGGATGAATCTTCT;MAPQ=60;MATEID=224648:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_36823501_36848501_12C;SPAN=330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
4	39029470	225324:1	T	T[4:39029739[	26	PASS	EVDNC=ASSMB;HOMSEQ=AAGAACTAATTTTT;MAPQ=60;MATEID=225324:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_39028501_39053501_38C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
4	39029739	225324:2	A	]4:39029470]A	26	PASS	EVDNC=ASSMB;HOMSEQ=AAGAACTAATTTTT;MAPQ=60;MATEID=225324:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_39028501_39053501_38C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
4	40023395	225782:1	T	T[4:40024660[	49	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=225782:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:40023395(+)-4:40024660(-)__4_40008501_40033501D;SPAN=1265;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51
4	40024660	225782:2	T	]4:40023395]T	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=225782:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:40023395(+)-4:40024660(-)__4_40008501_40033501D;SPAN=1265;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51
4	42903148	226777:1	T	T[4:42903837[	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=226777:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_42899501_42924501_62C;SPAN=689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
4	42903837	226777:2	T	]4:42903148]T	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=226777:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_42899501_42924501_62C;SPAN=689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
4	46200780	227682:1	C	C[4:46203010[	62	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=227682:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_4_46182501_46207501_3C;SPAN=2230;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:21:0:-62.72:62.72
4	46203010	227682:2	T	]4:46200780]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=227682:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_4_46182501_46207501_3C;SPAN=2230;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:21:0:-62.72:62.72
4	49932115	229270:1	T	T[4:51702561[	26	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=229270:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:49932115(+)-4:51702561(-)__4_51695001_51720001D;SPAN=1770446;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	51702561	229270:2	C	]4:49932115]C	26	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=229270:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:49932115(+)-4:51702561(-)__4_51695001_51720001D;SPAN=1770446;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	52081946	229353:1	G	]4:52082092]G	35	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=229353:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_52062501_52087501_37C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
4	52082092	229353:2	A	A[4:52081946[	35	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=229353:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_52062501_52087501_37C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
4	54616269	230068:1	C	C[4:54616574[	32	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAGCTTATTTACC;MAPQ=60;MATEID=230068:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_54610501_54635501_78C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57
4	54616574	230068:2	A	]4:54616269]A	32	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAGCTTATTTACC;MAPQ=60;MATEID=230068:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_54610501_54635501_78C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57
4	54942519	230152:1	A	A[4:54942753[	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAACA;MAPQ=60;MATEID=230152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_54929001_54954001_18C;SPAN=234;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
4	54942753	230152:2	A	]4:54942519]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAACA;MAPQ=60;MATEID=230152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_54929001_54954001_18C;SPAN=234;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
4	55132403	230208:1	T	T[4:55132722[	36	PASS	EVDNC=ASSMB;HOMSEQ=GAGGTTTAGAAAGTTT;MAPQ=60;MATEID=230208:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_55125001_55150001_117C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31
4	55132722	230208:2	G	]4:55132403]G	36	PASS	EVDNC=ASSMB;HOMSEQ=GAGGTTTAGAAAGTTT;MAPQ=60;MATEID=230208:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_55125001_55150001_117C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31
4	57429014	230950:1	G	]4:57429550]G	20	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=GGTTTCACCATGTTGGCCAGG;MAPQ=36;MATEID=230950:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_57428001_57453001_17C;SPAN=536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:4:5:-20.22:20.45
4	57429550	230950:2	G	G[4:57429014[	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTTTCACCATGTTGGCCAGG;MAPQ=60;MATEID=230950:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_57428001_57453001_17C;SPAN=536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:4:5:-20.22:20.45
4	58562833	231342:1	T	]4:58569632]T	74	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=231342:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_19C;SPAN=6799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:40:25.1:74.6,0,25.1:18:17:-75.86:75.86
4	58562834	231343:1	T	T[4:58569374[	48	PASS	EVDNC=ASSMB;HOMSEQ=TTTT;MAPQ=60;MATEID=231343:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_47C;SPAN=6540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46
4	58569374	231343:2	T	]4:58562834]T	48	PASS	EVDNC=ASSMB;HOMSEQ=TTTT;MAPQ=60;MATEID=231343:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_47C;SPAN=6540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46
4	58569632	231342:2	T	T[4:58562833[	74	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=231342:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_19C;SPAN=6799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:40:25.1:74.6,0,25.1:18:17:-75.86:75.86
4	58790074	231475:1	A	]4:58808344]A	42	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=231475:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_58800001_58825001_79C;SPAN=18270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:9:9:-42.71:42.71
4	58808344	231475:2	A	A[4:58790074[	42	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=231475:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_58800001_58825001_79C;SPAN=18270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:9:9:-42.71:42.71
4	59078961	231628:1	T	T[4:59084875[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=231628:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:59078961(+)-4:59084875(-)__4_59069501_59094501D;SPAN=5914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3
4	59084875	231628:2	A	]4:59078961]A	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=231628:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:59078961(+)-4:59084875(-)__4_59069501_59094501D;SPAN=5914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3
4	60231729	697955:1	T	T[14:52425216[	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=697955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_52405501_52430501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29
4	60232158	697967:1	T	]14:52476005]T	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=697967:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_52454501_52479501_37C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:25:22.7:22.7,0,39.2:7:8:-22.68:22.95
4	60450062	232202:1	T	T]4:60454315]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=232202:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:60450062(+)-4:60454315(+)__4_60441501_60466501D;SPAN=4253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:45:23.6:23.6,0,89.6:0:11:-23.66:25.82
4	60454315	232202:2	A	A]4:60450062]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=232202:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:60450062(+)-4:60454315(+)__4_60441501_60466501D;SPAN=4253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:45:23.6:23.6,0,89.6:0:11:-23.66:25.82
4	61073473	232396:1	A	A[4:61076526[	56	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=232396:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_4_61054001_61079001_21C;SPAN=3053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	61076526	232396:2	A	]4:61073473]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=232396:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_4_61054001_61079001_21C;SPAN=3053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	61162594	232429:1	G	G[4:61162877[	50	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=232429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61152001_61177001_22C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:32:27.5:50.6,0,27.5:18:0:-50.7:50.7
4	61162877	232429:2	G	]4:61162594]G	50	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=232429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61152001_61177001_22C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:32:27.5:50.6,0,27.5:18:0:-50.7:50.7
4	61939924	232702:1	T	]9:41047840]T	26	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=14;MATEID=232702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61936001_61961001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:8:5:-26.41:26.41
4	63062069	357378:1	C	[6:101065929[C	69	PASS	DISC_MAPQ=54;EVDNC=ASDIS;INSERTION=TACAAACTCACTGGGAGGAA;MAPQ=60;MATEID=357378:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_6_101062501_101087501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:15:6.3:69.3,6.3,0:22:3:-69.32:69.32
4	63828610	233390:1	G	G[4:63848674[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATTATAAAG;MAPQ=60;MATEID=233390:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_63822501_63847501_57C;SPAN=20064;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:8:3.6:39.6,3.6,0:8:9:-39.61:39.61
4	63848674	233390:2	A	]4:63828610]A	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATTATAAAG;MAPQ=60;MATEID=233390:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_63822501_63847501_57C;SPAN=20064;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:8:3.6:39.6,3.6,0:8:9:-39.61:39.61
4	63917880	233453:1	T	T[4:63918837[	69	PASS	EVDNC=ASSMB;HOMSEQ=AAGGCCAATATCTT;MAPQ=60;MATEID=233453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_63896001_63921001_8C;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:16:6.3:69.3,6.3,0:23:0:-69.32:69.32
4	63918837	233453:2	A	]4:63917880]A	69	PASS	EVDNC=ASSMB;HOMSEQ=AAGGCCAATATCTT;MAPQ=60;MATEID=233453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_63896001_63921001_8C;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:16:6.3:69.3,6.3,0:23:0:-69.32:69.32
4	64748503	233822:1	A	A]4:64749754]	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTGCCTAAATTTAGT;MAPQ=60;MATEID=233822:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_64729001_64754001_3C;SPAN=1251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:13:6:-39.11:39.25
4	64748549	233823:1	T	[4:64749438[T	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=233823:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_64729001_64754001_17C;SPAN=889;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:7:9:-31.74:31.78
4	64749438	233823:2	C	[4:64748549[C	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=233823:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_64729001_64754001_17C;SPAN=889;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:7:9:-31.74:31.78
4	64749754	233822:2	C	C]4:64748503]	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTGCCTAAATTTAGT;MAPQ=60;MATEID=233822:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_64729001_64754001_3C;SPAN=1251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:13:6:-39.11:39.25
4	64856273	233886:1	C	]4:65038861]C	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTTTCTATGGGAAGGCA;MAPQ=60;MATEID=233886:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_65023001_65048001_27C;SPAN=182588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:6:9:-35.78:35.78
4	65038861	233886:2	C	C[4:64856273[	35	PASS	DISC_MAPQ=51;EVDNC=ASDIS;INSERTION=ATTTTCTATGGGAAGGCA;MAPQ=60;MATEID=233886:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_65023001_65048001_27C;SPAN=182588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:6:9:-35.78:35.78
4	65548212	234074:2	T	]2:41825584]T	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=234074:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:41825584(+)-4:65548212(-)__4_65537501_65562501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51
4	65936763	234286:2	G	G]3:139885156]	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GG;MAPQ=60;MATEID=234286:1;MATENM=12;NM=0;NUMPARTS=2;SCTG=c_4_65929501_65954501_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:21:4:-75.92:75.92
4	65937116	988171:1	T	[Un_KN707700v1_decoy:1[T	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_551_1_3703_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:12:0:-36.31:36.31
4	66294124	234423:1	T	T[4:66294902[	27	PASS	EVDNC=ASSMB;HOMSEQ=TAGT;MAPQ=60;MATEID=234423:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_66272501_66297501_19C;SPAN=778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:11:0:-27.6:27.96
4	66294902	234423:2	T	]4:66294124]T	27	PASS	EVDNC=ASSMB;HOMSEQ=TAGT;MAPQ=60;MATEID=234423:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_66272501_66297501_19C;SPAN=778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:11:0:-27.6:27.96
4	69241718	235250:1	T	[4:69308055[T	49	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=235250:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:69241718(-)-4:69308055(-)__4_69237001_69262001D;SPAN=66337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34
4	69308055	235250:2	T	[4:69241718[T	49	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=235250:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:69241718(-)-4:69308055(-)__4_69237001_69262001D;SPAN=66337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34
4	69601740	235472:1	G	G[4:69607085[	46	PASS	EVDNC=ASSMB;INSERTION=CAACCAGCTGGTGCTAAC;MAPQ=60;MATEID=235472:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_69604501_69629501_122C;SPAN=5345;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
4	69607085	235472:2	A	]4:69601740]A	46	PASS	EVDNC=ASSMB;INSERTION=CAACCAGCTGGTGCTAAC;MAPQ=60;MATEID=235472:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_69604501_69629501_122C;SPAN=5345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
4	70009057	235602:1	G	]4:70009155]G	54	PASS	EVDNC=ASSMB;HOMSEQ=GGAAAG;MAPQ=60;MATEID=235602:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_69996501_70021501_59C;SPAN=98;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:53:54.5:54.5,0,77.6:21:0:-54.42:54.67
4	70009155	235602:2	G	G[4:70009057[	54	PASS	EVDNC=ASSMB;HOMSEQ=GGAAAG;MAPQ=60;MATEID=235602:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_69996501_70021501_59C;SPAN=98;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:53:54.5:54.5,0,77.6:21:0:-54.42:54.67
4	70092925	235620:1	A	[Un_JTFH01000105v1_decoy:1[A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=235620:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_70070001_70095001_57C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:14:9.3:102.3,9.3,0:34:0:-102.3:102.3
4	70132919	347771:1	T	T[6:69542551[	29	PASS	EVDNC=ASSMB;HOMSEQ=GCT;MAPQ=60;MATEID=347771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
4	70133000	347773:1	A	]6:69542531]A	20	PASS	EVDNC=ASSMB;HOMSEQ=ATCCCA;MAPQ=60;MATEID=347773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_105C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82
4	70133226	235647:1	C	C[4:70133846[	37	PASS	EVDNC=ASSMB;HOMSEQ=TACCC;MAPQ=60;MATEID=235647:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_70119001_70144001_18C;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:13:0:-38.44:38.44
4	70133846	235647:2	T	]4:70133226]T	37	PASS	EVDNC=ASSMB;HOMSEQ=TACCC;MAPQ=60;MATEID=235647:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_70119001_70144001_18C;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:13:0:-38.44:38.44
4	72234750	236443:1	G	]4:72287710]G	25	PASS	EVDNC=ASSMB;INSERTION=TGTGTGACA;MAPQ=47;MATEID=236443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72275001_72300001_16C;SPAN=52960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:9:0:-26.19:26.19
4	72287710	236443:2	A	A[4:72234750[	25	PASS	EVDNC=ASSMB;INSERTION=TGTGTGACA;MAPQ=60;MATEID=236443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72275001_72300001_16C;SPAN=52960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:9:0:-26.19:26.19
4	72965532	236699:1	A	A[4:72966104[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=59;MATEID=236699:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72961001_72986001_22C;SPAN=572;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69
4	72966104	236699:2	A	]4:72965532]A	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=236699:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72961001_72986001_22C;SPAN=572;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69
4	74717517	237170:1	T	T[4:74723589[	46	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=237170:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:74717517(+)-4:74723589(-)__4_74700501_74725501D;SPAN=6072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21
4	74723589	237170:2	C	]4:74717517]C	46	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=237170:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:74717517(+)-4:74723589(-)__4_74700501_74725501D;SPAN=6072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21
4	76427327	898387:1	A	A[21:18857736[	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=898387:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:76427327(+)-21:18857736(-)__21_18840501_18865501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
4	79284589	238752:1	G	G[4:79284903[	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAATGATTGAGG;MAPQ=60;MATEID=238752:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_79282001_79307001_61C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:20:6:66,6,0:14:10:-66.02:66.02
4	79284903	238752:2	A	]4:79284589]A	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAATGATTGAGG;MAPQ=60;MATEID=238752:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_79282001_79307001_61C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:20:6:66,6,0:14:10:-66.02:66.02
4	79966908	238958:1	G	G[4:79972938[	33	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAGGGCGTCCG;MAPQ=60;MATEID=238958:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_79968001_79993001_85C;SPAN=6030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
4	79972938	238958:2	A	]4:79966908]A	33	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAGGGCGTCCG;MAPQ=60;MATEID=238958:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_79968001_79993001_85C;SPAN=6030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
4	79973439	280936:1	T	T[5:21207604[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=280936:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:79973439(+)-5:21207604(-)__5_21192501_21217501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:36:9.9:108.9,9.9,0:0:34:-108.9:108.9
4	80381385	239062:1	T	T[4:80381712[	73	PASS	EVDNC=ASSMB;HOMSEQ=CATATACATTTTT;MAPQ=60;MATEID=239062:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_80360001_80385001_47C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:32:4.4:73.7,0,4.4:25:0:-76.74:76.74
4	80381712	239062:2	C	]4:80381385]C	73	PASS	EVDNC=ASSMB;HOMSEQ=CATATACATTTTT;MAPQ=60;MATEID=239062:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_80360001_80385001_47C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:32:4.4:73.7,0,4.4:25:0:-76.74:76.74
4	83253876	240056:1	T	]4:83481515]T	17	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=240056:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_83471501_83496501_117C;SPAN=227639;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39
4	83481515	240056:2	T	T[4:83253876[	17	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=240056:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_83471501_83496501_117C;SPAN=227639;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39
4	83695488	243022:1	A	]4:93378383]A	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCTTGT;MAPQ=60;MATEID=243022:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_93369501_93394501_6C;SPAN=9682895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:10:11:-51.41:51.41
4	85643235	240634:1	T	T[4:85643564[	25	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=240634:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_85627501_85652501_117C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:111:25.1:25.1,0,252.8:17:0:-24.92:36.04
4	85643564	240634:2	T	]4:85643235]T	25	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=240634:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_85627501_85652501_117C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:111:25.1:25.1,0,252.8:17:0:-24.92:36.04
4	87347149	241148:1	G	G[4:87353146[	50	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=241148:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87347149(+)-4:87353146(-)__4_87342501_87367501D;SPAN=5997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77
4	87353146	241148:2	C	]4:87347149]C	50	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=241148:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87347149(+)-4:87353146(-)__4_87342501_87367501D;SPAN=5997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77
4	87562748	241261:1	C	C[4:87565161[	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGTTACAAACAAC;MAPQ=60;MATEID=241261:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87563001_87588001_2C;SPAN=2413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:32:8.7:95.7,8.7,0:16:24:-95.72:95.72
4	87565161	241261:2	A	]4:87562748]A	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGTTACAAACAAC;MAPQ=60;MATEID=241261:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87563001_87588001_2C;SPAN=2413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:32:8.7:95.7,8.7,0:16:24:-95.72:95.72
4	87918124	241445:1	T	]4:87922117]T	12	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=241445:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87918124(-)-4:87922117(+)__4_87906001_87931001D;SPAN=3993;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2
4	87922117	241445:2	T	T[4:87918124[	12	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=241445:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87918124(-)-4:87922117(+)__4_87906001_87931001D;SPAN=3993;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2
4	87926012	241456:1	T	[4:87937548[T	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=241456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87930501_87955501_67C;SPAN=11536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:18:7.5:82.5,7.5,0:19:14:-82.52:82.52
4	87937548	241456:2	T	[4:87926012[T	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=241456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87930501_87955501_67C;SPAN=11536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:18:7.5:82.5,7.5,0:19:14:-82.52:82.52
4	87999639	241468:1	A	A[4:88000093[	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAA;MAPQ=60;MATEID=241468:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_87979501_88004501_147C;SPAN=454;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
4	88000093	241468:2	A	]4:87999639]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAA;MAPQ=60;MATEID=241468:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_87979501_88004501_147C;SPAN=454;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
4	88171507	241535:1	A	A[Un_KN707742v1_decoy:1[	26	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=241535:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_88151001_88176001_126C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69
4	88760322	241695:1	T	T[4:88760632[	27	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATGCCAAGT;MAPQ=60;MATEID=241695:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_88739001_88764001_2C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
4	88760632	241695:2	A	]4:88760322]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATGCCAAGT;MAPQ=60;MATEID=241695:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_88739001_88764001_2C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
4	89152989	242554:1	A	[4:91298139[A	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGT;MAPQ=60;MATEID=242554:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_23C;SPAN=2145150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:10:6:-40.63:40.63
4	89522258	242557:1	A	A[4:91297454[	35	PASS	EVDNC=ASSMB;INSERTION=GTTT;MAPQ=60;MATEID=242557:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_35C;SPAN=1775196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
4	90179639	242218:1	T	]4:90205868]T	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=242218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90184501_90209501_34C;SPAN=26229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
4	90205868	242218:2	T	T[4:90179639[	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=242218:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90184501_90209501_34C;SPAN=26229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
4	90473715	242279:1	C	C[4:90478988[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=242279:2;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CTCTCT;SCTG=c_4_90478501_90503501_31C;SECONDARY;SPAN=5273;SUBN=9;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:4.2:19.8,0,4.2:1:9:-20.4:20.4
4	90478988	242279:2	C	]4:90473715]C	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=0;MATEID=242279:1;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CTCTCT;SCTG=c_4_90478501_90503501_31C;SECONDARY;SPAN=5273;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:4.2:19.8,0,4.2:1:9:-20.4:20.4
4	90570520	242324:1	A	A[4:90744228[	36	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242324:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_4_90723501_90748501_0C;SPAN=173708;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:2:3.3:36.3,3.3,0:12:0:-36.31:36.31
4	90635828	242338:1	C	C[4:90816456[	39	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=242338:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90797001_90822001_26C;SPAN=180628;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:15:0.9:39.6,0.9,0:13:0:-41.34:41.34
4	90675647	242318:1	T	T[4:90681758[	22	PASS	EVDNC=ASSMB;HOMSEQ=GTGTTTTTATCTT;MAPQ=60;MATEID=242318:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_4_90674501_90699501_16C;SPAN=6111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
4	90681758	242318:2	G	]4:90675647]G	22	PASS	EVDNC=ASSMB;HOMSEQ=GTGTTTTTATCTT;MAPQ=60;MATEID=242318:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_4_90674501_90699501_16C;SPAN=6111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
4	90685271	242386:1	C	C[4:90934883[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAC;MAPQ=60;MATEID=242386:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90919501_90944501_46C;SPAN=249612;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:11:10:-46.21:46.21
4	90744228	242324:2	A	]4:90570520]A	36	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242324:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_4_90723501_90748501_0C;SPAN=173708;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:2:3.3:36.3,3.3,0:12:0:-36.31:36.31
4	90816456	242338:2	C	]4:90635828]C	39	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=242338:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90797001_90822001_26C;SPAN=180628;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:15:0.9:39.6,0.9,0:13:0:-41.34:41.34
4	90834186	242353:1	C	C[4:90834716[	16	PASS	EVDNC=ASSMB;INSERTION=TATTTTCCTTCCTAGTAC;MAPQ=60;MATEID=242353:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90821501_90846501_42C;SPAN=530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
4	90834716	242353:2	T	]4:90834186]T	16	PASS	EVDNC=ASSMB;INSERTION=TATTTTCCTTCCTAGTAC;MAPQ=60;MATEID=242353:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90821501_90846501_42C;SPAN=530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
4	90836102	242387:1	T	T[4:90927944[	29	PASS	EVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=242387:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90919501_90944501_12C;SPAN=91842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	90927944	242387:2	T	]4:90836102]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=242387:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90919501_90944501_12C;SPAN=91842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	90934883	242386:2	A	]4:90685271]A	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAC;MAPQ=60;MATEID=242386:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90919501_90944501_46C;SPAN=249612;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:11:10:-46.21:46.21
4	90997734	242586:1	G	G[4:91373474[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=242586:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_91360501_91385501_11C;SPAN=375740;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:11:9:-42.24:42.24
4	91010406	242436:1	A	A[4:91014686[	32	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242436:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90993001_91018001_49C;SPAN=4280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57
4	91014686	242436:2	A	]4:91010406]A	32	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242436:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90993001_91018001_49C;SPAN=4280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57
4	91092356	242516:1	T	T[4:91226523[	39	PASS	EVDNC=ASSMB;HOMSEQ=CATGT;MAPQ=60;MATEID=242516:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91213501_91238501_7C;SPAN=134167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41
4	91154925	242510:1	C	C[4:91191964[	82	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=59;MATEID=242510:2;MATENM=8;NM=3;NUMPARTS=2;SCTG=c_4_91189001_91214001_1C;SPAN=37039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:6:7.5:82.5,7.5,0:27:0:-82.52:82.52
4	91191964	242510:2	C	]4:91154925]C	82	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=59;MATEID=242510:1;MATENM=3;NM=8;NUMPARTS=2;SCTG=c_4_91189001_91214001_1C;SPAN=37039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:6:7.5:82.5,7.5,0:27:0:-82.52:82.52
4	91226523	242516:2	C	]4:91092356]C	39	PASS	EVDNC=ASSMB;HOMSEQ=CATGT;MAPQ=60;MATEID=242516:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91213501_91238501_7C;SPAN=134167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41
4	91297454	242557:2	A	]4:89522258]A	35	PASS	EVDNC=ASSMB;INSERTION=GTTT;MAPQ=60;MATEID=242557:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_35C;SPAN=1775196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
4	91298139	242554:2	A	[4:89152989[A	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGT;MAPQ=60;MATEID=242554:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_23C;SPAN=2145150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:10:6:-40.63:40.63
4	91298270	242563:1	A	A]4:91298737]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=242563:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:91298270(+)-4:91298737(+)__4_91287001_91312001D;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:33:23.9:23.9,0,56.9:0:10:-23.73:24.58
4	91298737	242563:2	C	C]4:91298270]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=242563:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:91298270(+)-4:91298737(+)__4_91287001_91312001D;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:33:23.9:23.9,0,56.9:0:10:-23.73:24.58
4	91373474	242586:2	T	]4:90997734]T	41	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=242586:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_91360501_91385501_11C;SPAN=375740;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:11:9:-42.24:42.24
4	91668387	242661:1	A	]4:132470810]A	25	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=242661:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_91654501_91679501_22C;SPAN=40802423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:9:3:-25.7:25.87
4	92646207	242852:1	T	]Un_JTFH01000254v1_decoy:397]T	89	PASS	EVDNC=ASSMB;HOMSEQ=TTTCT;MAPQ=60;MATEID=242852:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_92634501_92659501_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89
4	92647307	242855:1	G	G[Un_JTFH01000254v1_decoy:1952[	95	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=242855:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_92634501_92659501_1C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:22:8.7:95.7,8.7,0:32:0:-95.72:95.72
4	93189624	242967:1	T	T[4:93191584[	32	PASS	EVDNC=ASSMB;INSERTION=ATCAAATATCAAAAATCATATATCAAATATCATATATTCAAATATCACTTAGTGA;MAPQ=60;MATEID=242967:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_93173501_93198501_25C;SPAN=1960;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:38:32.3:32.3,0,62:13:0:-32.23:32.79
4	93191584	242967:2	T	]4:93189624]T	32	PASS	EVDNC=ASSMB;INSERTION=ATCAAATATCAAAAATCATATATCAAATATCATATATTCAAATATCACTTAGTGA;MAPQ=60;MATEID=242967:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_93173501_93198501_25C;SPAN=1960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:38:32.3:32.3,0,62:13:0:-32.23:32.79
4	93378383	243022:2	T	T[4:83695488[	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCTTGT;MAPQ=60;MATEID=243022:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_93369501_93394501_6C;SPAN=9682895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:10:11:-51.41:51.41
4	93638303	243080:1	T	T[4:93644340[	29	PASS	EVDNC=ASSMB;HOMSEQ=TAAAACTTGCATCTT;MAPQ=60;MATEID=243080:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_93639001_93664001_46C;SPAN=6037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
4	93644340	243080:2	T	]4:93638303]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TAAAACTTGCATCTT;MAPQ=60;MATEID=243080:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_93639001_93664001_46C;SPAN=6037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
4	94597407	390417:1	T	]7:46865077]T	89	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TTTTTTTTTTTT;MAPQ=60;MATEID=390417:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_64C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:36:0:89.1,0,0:10:25:-94.04:94.04
4	94597595	390418:1	C	C[7:46865061[	99	PASS	EVDNC=ASSMB;HOMSEQ=GAAGCC;MAPQ=60;MATEID=390418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_107C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:30:11.1:122.1,11.1,0:40:0:-122.1:122.1
4	94716594	243382:1	T	T[4:94717511[	56	PASS	EVDNC=ASSMB;HOMSEQ=ATTTT;MAPQ=60;MATEID=243382:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_94717001_94742001_52C;SPAN=917;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	94717511	243382:2	A	]4:94716594]A	56	PASS	EVDNC=ASSMB;HOMSEQ=ATTTT;MAPQ=60;MATEID=243382:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_94717001_94742001_52C;SPAN=917;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	94949314	243471:1	T	T[4:94949616[	11	PASS	EVDNC=ASSMB;HOMSEQ=TGAACTCATTCTTTTTT;MAPQ=60;MATEID=243471:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_94937501_94962501_90C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59
4	94949616	243471:2	T	]4:94949314]T	11	PASS	EVDNC=ASSMB;HOMSEQ=TGAACTCATTCTTTTTT;MAPQ=60;MATEID=243471:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_94937501_94962501_90C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59
4	97127128	245757:1	C	]4:103789730]C	28	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=245757:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103782001_103807001_54C;SPAN=6662602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
4	97127269	483259:1	A	A[9:584229[	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=483259:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:6:5:-30.15:30.15
4	100380547	161281:2	A	]3:47825187]A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=161281:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:47825187(+)-4:100380547(-)__3_47824001_47849001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	100603230	161208:2	C	C[3:47737029[	32	PASS	EVDNC=ASSMB;HOMSEQ=ACC;MAPQ=60;MATEID=161208:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_47726001_47751001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
4	100830780	245066:1	C	C[4:100831103[	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=245066:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_100817501_100842501_163C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:11:4:-38.44:38.44
4	100831103	245066:2	G	]4:100830780]G	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=245066:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_100817501_100842501_163C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:11:4:-38.44:38.44
4	102408341	245468:1	T	T[4:102410994[	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=245468:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:102408341(+)-4:102410994(-)__4_102410001_102435001D;SPAN=2653;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:11:3:33,3,0:0:10:-32.46:32.46
4	102410994	245468:2	C	]4:102408341]C	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=245468:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:102408341(+)-4:102410994(-)__4_102410001_102435001D;SPAN=2653;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:11:3:33,3,0:0:10:-32.46:32.46
4	103789730	245757:2	A	A[4:97127128[	28	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=245757:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103782001_103807001_54C;SPAN=6662602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
4	103972889	245845:1	G	G[4:103973524[	42	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=245845:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103953501_103978501_3C;SPAN=635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9
4	103973524	245845:2	T	]4:103972889]T	42	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=245845:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103953501_103978501_3C;SPAN=635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9
4	105316751	246193:1	G	G[4:105317024[	85	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=246193:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_105301001_105326001_127C;SPAN=273;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
4	105317024	246193:2	A	]4:105316751]A	85	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=246193:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_105301001_105326001_127C;SPAN=273;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
4	105671656	476702:1	A	]8:129429764]A	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=476702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_125C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:30:17.9:57.5,0,17.9:13:9:-58.74:58.74
4	105671811	489643:1	T	T]9:30288439]	56	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=ATGT;MAPQ=60;MATEID=489643:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_56C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:10:5.1:56.1,5.1,0:14:5:-56.11:56.11
4	105905762	246472:1	T	]4:106155800]T	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=246472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_24C;SPAN=250038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:25:0.3:62.7,0.3,0:17:11:-66.01:66.01
4	106135421	246475:1	C	C[4:106142206[	99	PASS	EVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=246475:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_1C;SPAN=6785;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:43:1.1:106.7,0,1.1:36:0:-113:113
4	106142206	246475:2	A	]4:106135421]A	99	PASS	EVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=246475:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_1C;SPAN=6785;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:43:1.1:106.7,0,1.1:36:0:-113:113
4	106155800	246472:2	G	G[4:105905762[	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=246472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_24C;SPAN=250038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:25:0.3:62.7,0.3,0:17:11:-66.01:66.01
4	106683143	246663:1	A	A[4:106688097[	34	PASS	EVDNC=ASSMB;HOMSEQ=AATA;MAPQ=60;MATEID=246663:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_106673001_106698001_2C;SPAN=4954;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
4	106688097	246663:2	A	]4:106683143]A	34	PASS	EVDNC=ASSMB;HOMSEQ=AATA;MAPQ=60;MATEID=246663:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_106673001_106698001_2C;SPAN=4954;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
4	107206671	246762:1	T	T[4:107210558[	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAACATTAGGATTCTCTTT;MAPQ=60;MATEID=246762:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_4_107187501_107212501_28C;SPAN=3887;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:16:7.2:79.2,7.2,0:26:0:-79.22:79.22
4	107210558	246762:2	A	]4:107206671]A	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAACATTAGGATTCTCTTT;MAPQ=60;MATEID=246762:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_4_107187501_107212501_28C;SPAN=3887;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:16:7.2:79.2,7.2,0:26:0:-79.22:79.22
4	107355664	246824:1	C	C[4:107358347[	52	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=246824:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:107355664(+)-4:107358347(-)__4_107334501_107359501D;SPAN=2683;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:38:42.2:52.1,0,42.2:0:19:-52.08:52.08
4	107358347	246824:2	A	]4:107355664]A	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=246824:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:107355664(+)-4:107358347(-)__4_107334501_107359501D;SPAN=2683;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:38:42.2:52.1,0,42.2:0:19:-52.08:52.08
4	108186534	247086:1	T	T[4:108186820[	39	PASS	EVDNC=ASSMB;HOMSEQ=AATGTTTGTATTTTTT;MAPQ=60;MATEID=247086:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_108167501_108192501_68C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39
4	108186820	247086:2	A	]4:108186534]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AATGTTTGTATTTTTT;MAPQ=60;MATEID=247086:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_108167501_108192501_68C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39
4	109577601	247504:1	T	T[4:109577910[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGTACTTGAATTCTTT;MAPQ=60;MATEID=247504:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_109564001_109589001_83C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:25:9:99,9,0:23:12:-99.02:99.02
4	109577910	247504:2	G	]4:109577601]G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGTACTTGAATTCTTT;MAPQ=60;MATEID=247504:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_109564001_109589001_83C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:25:9:99,9,0:23:12:-99.02:99.02
4	111438522	468851:1	C	]8:108770582]C	15	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=468851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:111438522(-)-8:108770582(+)__8_108755501_108780501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:0:9:-15.65:19.78
4	111533683	248239:1	T	]4:111641927]T	24	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=248239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_111622001_111647001_72C;SPAN=108244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:10:0:-24.86:25.27
4	111641927	248239:2	T	T[4:111533683[	24	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=248239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_111622001_111647001_72C;SPAN=108244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:10:0:-24.86:25.27
4	112548833	248540:1	G	G[4:112549126[	34	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGTAAAGATG;MAPQ=60;MATEID=248540:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_112528501_112553501_80C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76
4	112549126	248540:2	A	]4:112548833]A	34	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGTAAAGATG;MAPQ=60;MATEID=248540:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_112528501_112553501_80C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76
4	113213952	248806:1	T	T[4:113214422[	41	PASS	EVDNC=ASSMB;HOMSEQ=CAAAATGCTGTTTTAT;MAPQ=60;MATEID=248806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_113190001_113215001_103C;SPAN=470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:15:0:-41.77:41.77
4	113214422	248806:2	C	]4:113213952]C	41	PASS	EVDNC=ASSMB;HOMSEQ=CAAAATGCTGTTTTAT;MAPQ=60;MATEID=248806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_113190001_113215001_103C;SPAN=470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:15:0:-41.77:41.77
4	113796061	252066:1	G	]4:124022062]G	52	PASS	DISC_MAPQ=24;EVDNC=ASDIS;MAPQ=54;MATEID=252066:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_124019001_124044001_132C;SPAN=10226001;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:11:8:-51.41:51.41
4	113846014	248969:1	G	G]8:91873626]	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=248969:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_113827001_113852001_31C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:7:4:-20.43:21.63
4	113846014	261406:1	G	G[4:151810203[	39	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=GG;INSERTION=GGTTTTCTAGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTCTTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCGTAATTGCCCTGGCCAGAACTTC;MAPQ=60;MATEID=261406:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151802001_151827001_73C;SPAN=37964189;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:11:3:-39.77:39.77
4	114253972	249114:1	A	A[4:114262680[	92	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=249114:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_114243501_114268501_14C;SPAN=8708;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42
4	114262680	249114:2	A	]4:114253972]A	92	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=249114:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_114243501_114268501_14C;SPAN=8708;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42
4	116186292	271163:1	G	G[4:188802177[	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=271163:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_188797001_188822001_5C;SPAN=72615885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:3:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	116655850	260549:1	A	[4:149264903[A	32	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=260549:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116655850(-)-4:149264903(-)__4_149254001_149279001D;SPAN=32609053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59
4	116722508	464088:1	A	]8:96174456]A	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=464088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_12C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:10:11:-45.23:45.23
4	116723100	249870:1	T	T]4:124757819]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=249870:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116723100(+)-4:124757819(+)__4_116718001_116743001D;SPAN=8034719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
4	116923084	13030:2	T	]1:53954398]T	0	PASS	EVDNC=ASSMB;HOMSEQ=TATTTCAT;MAPQ=60;MATEID=13030:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_53949001_53974001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:98:4.2:0,4.2,254.1:7:0:4.44:12.39
4	117217096	485469:1	T	]9:10098711]T	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=485469:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:117217096(-)-9:10098711(+)__9_10094001_10119001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
4	117217097	258447:1	A	[4:142696557[A	25	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=258447:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_4_142688001_142713001_26C;SPAN=25479460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:9:2:-25.14:25.46
4	117766935	250231:1	T	T[4:117767341[	15	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=250231:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_117747001_117772001_1C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51
4	117767341	250231:2	T	]4:117766935]T	15	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=250231:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_117747001_117772001_1C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51
4	118375200	250416:1	T	T[4:118375524[	0	PASS	EVDNC=ASSMB;HOMSEQ=GTCTTTCATTGTT;MAPQ=60;MATEID=250416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_118359501_118384501_43C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:187:9.4:0,9.4,488.5:13:0:9.651:22.85
4	118375524	250416:2	G	]4:118375200]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GTCTTTCATTGTT;MAPQ=60;MATEID=250416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_118359501_118384501_43C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:187:9.4:0,9.4,488.5:13:0:9.651:22.85
4	119096097	250629:1	A	A[4:119096401[	75	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATGCTGCAATGA;MAPQ=60;MATEID=250629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_15C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:25:0:-75.92:75.92
4	119096401	250629:2	A	]4:119096097]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATGCTGCAATGA;MAPQ=60;MATEID=250629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_15C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:25:0:-75.92:75.92
4	119106089	250638:1	T	T[4:119106426[	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AT;MAPQ=60;MATEID=250638:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_94C;SPAN=337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:19:6.6:72.6,6.6,0:21:7:-72.62:72.62
4	119106426	250638:2	G	]4:119106089]G	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AT;MAPQ=60;MATEID=250638:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_94C;SPAN=337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:19:6.6:72.6,6.6,0:21:7:-72.62:72.62
4	120165938	250909:1	A	A[4:120166138[	20	PASS	EVDNC=ASSMB;HOMSEQ=AGCAGA;MAPQ=60;MATEID=250909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120148001_120173001_66C;SPAN=200;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45
4	120166138	250909:2	A	]4:120165938]A	20	PASS	EVDNC=ASSMB;HOMSEQ=AGCAGA;MAPQ=60;MATEID=250909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120148001_120173001_66C;SPAN=200;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45
4	120167449	250918:1	A	]4:120175328]A	19	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=250918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120172501_120197501_1C;SPAN=7879;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:13:12.8:19.4,0,12.8:7:0:-19.51:19.51
4	120175328	250918:2	T	T[4:120167449[	19	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=250918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120172501_120197501_1C;SPAN=7879;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:13:12.8:19.4,0,12.8:7:0:-19.51:19.51
4	120887787	251139:1	T	T[4:120888092[	27	PASS	EVDNC=ASSMB;HOMSEQ=GACATTTTATCCT;MAPQ=60;MATEID=251139:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_120883001_120908001_97C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
4	120888092	251139:2	G	]4:120887787]G	27	PASS	EVDNC=ASSMB;HOMSEQ=GACATTTTATCCT;MAPQ=60;MATEID=251139:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_120883001_120908001_97C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
4	122720683	469240:1	A	]8:109517001]A	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=469240:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109515001_109540001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:53:28.1:28.1,0,104:13:0:-28.02:30.54
4	122721082	262618:1	A	A[4:155292496[	34	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=262618:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_83C;SPAN=32571414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
4	123908850	252028:1	A	]4:123909098]A	19	PASS	EVDNC=ASSMB;INSERTION=CAGTGGCAATTC;MAPQ=60;MATEID=252028:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_123896501_123921501_67C;SPAN=248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:49:19.4:19.4,0,101.9:10:0:-19.24:22.58
4	123909098	252028:2	C	C[4:123908850[	19	PASS	EVDNC=ASSMB;INSERTION=CAGTGGCAATTC;MAPQ=60;MATEID=252028:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_123896501_123921501_67C;SPAN=248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:49:19.4:19.4,0,101.9:10:0:-19.24:22.58
4	124019638	459008:1	A	]8:78595007]A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=459008:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_78571501_78596501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:12:8:-48.04:48.04
4	124022062	252066:2	T	T[4:113796061[	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=252066:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_132C;SPAN=10226001;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:11:8:-51.41:51.41
4	124022412	252074:1	T	T[4:124024032[	56	PASS	EVDNC=ASSMB;HOMSEQ=CATTACATACTTTAT;MAPQ=60;MATEID=252074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_143C;SPAN=1620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
4	124024032	252074:2	C	]4:124022412]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CATTACATACTTTAT;MAPQ=60;MATEID=252074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_143C;SPAN=1620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
4	124756824	257428:1	C	[4:139693884[C	82	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AGGA;INSERTION=ACTCTTGTCCTTATTATTTCAGCTTGGCTAAAAGCCGTATTCCTTGTATGCTTTTATTGTTTTTCTGGTTCAACAAC;MAPQ=60;MATEID=257428:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_139674501_139699501_7C;SPAN=14937060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:27:7.5:82.5,7.5,0:22:6:-81.99:81.99
4	124756824	489646:1	C	[9:30288228[C	34	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AGGA;INSERTION=AAC;MAPQ=60;MATEID=489646:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=CAACAA;SCTG=c_9_30282001_30307001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:11.3:34.7,0,11.3:16:2:-35.31:35.31
4	124757819	249870:2	A	A]4:116723100]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=249870:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116723100(+)-4:124757819(+)__4_116718001_116743001D;SPAN=8034719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
4	124870323	252421:1	C	]4:125017418]C	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=252421:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_124999001_125024001_5C;SPAN=147095;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:10:9:-39.77:39.77
4	125017418	252421:2	C	C[4:124870323[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=252421:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_124999001_125024001_5C;SPAN=147095;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:10:9:-39.77:39.77
4	126064282	476707:1	T	[8:129429474[T	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=476707:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_74C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:13:3:-39.96:39.98
4	127522065	254786:1	T	]4:132470810]T	41	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=T;INSERTION=AGAGTTACAGCATGAGAATTGCATAAACATTGCAAATGCAAAGAAGGACATGTTATTTGCTCCAAGATAGCAGAGATTTCTCCTAGCA;MAPQ=60;MATEID=254786:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_132447001_132472001_15C;SPAN=4948745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
4	127522207	475363:1	T	T[8:126114017[	20	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=475363:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126101501_126126501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
4	127800198	261761:1	C	[4:152998534[C	62	PASS	DISC_MAPQ=52;EVDNC=ASDIS;INSERTION=TTAATTAA;MAPQ=60;MATEID=261761:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_152978001_153003001_10C;SPAN=25198336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:13:11:-61.54:61.54
4	129984083	254011:1	A	]4:130048236]A	27	PASS	EVDNC=ASSMB;INSERTION=TGTTGGAAAAAAT;MAPQ=60;MATEID=254011:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130046001_130071001_25C;SPAN=64153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
4	130048236	254011:2	G	G[4:129984083[	27	PASS	EVDNC=ASSMB;INSERTION=TGTTGGAAAAAAT;MAPQ=48;MATEID=254011:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130046001_130071001_25C;SPAN=64153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
4	130410267	600538:1	A	]11:86686540]A	30	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=600538:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:130410267(-)-11:86686540(+)__11_86681001_86706001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:0:11:-30.15:30.15
4	130736338	254250:1	A	]4:130736502]A	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=254250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130732001_130757001_16C;SPAN=164;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77
4	130736502	254250:2	A	A[4:130736338[	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=254250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130732001_130757001_16C;SPAN=164;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77
4	132259629	254724:1	T	T[4:132261800[	56	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=254724:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:132259629(+)-4:132261800(-)__4_132251001_132276001D;SPAN=2171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
4	132261800	254724:2	G	]4:132259629]G	56	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=254724:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:132259629(+)-4:132261800(-)__4_132251001_132276001D;SPAN=2171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
4	132470632	259250:1	A	[4:145607336[A	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTAACCCAGACTA;MAPQ=60;MATEID=259250:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_145603501_145628501_39C;SPAN=13136704;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:7:6:-34.76:34.76
4	132470810	254786:2	A	A[4:127522065[	41	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=T;INSERTION=AGAGTTACAGCATGAGAATTGCATAAACATTGCAAATGCAAAGAAGGACATGTTATTTGCTCCAAGATAGCAGAGATTTCTCCTAGCA;MAPQ=60;MATEID=254786:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_132447001_132472001_15C;SPAN=4948745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
4	132470810	242661:2	A	A[4:91668387[	25	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=242661:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_91654501_91679501_22C;SPAN=40802423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:9:3:-25.7:25.87
4	132524277	254804:1	A	A[4:132524547[	49	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=254804:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_132520501_132545501_115C;SPAN=270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:17:0:-51.34:51.34
4	132524547	254804:2	A	]4:132524277]A	49	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=254804:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_132520501_132545501_115C;SPAN=270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:17:0:-51.34:51.34
4	132747922	261326:1	C	[4:151538082[C	67	PASS	DISC_MAPQ=57;EVDNC=TSI_G;HOMSEQ=AG;INSERTION=TGGGAAGCAGGGAATTGCTGCTGGAAAGACAACCAGATCATGTCTGCCATAGTGCTCAAAGAAAAATAATTTTAAAGTTACAGAAA;MAPQ=60;MATEID=261326:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151532501_151557501_28C;SPAN=18790160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:30:8:67.4,0,8:16:10:-70.2:70.2
4	133109854	255045:1	T	]4:133181023]T	34	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=255045:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133157501_133182501_52C;SPAN=71169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
4	133181023	255045:2	T	T[4:133109854[	34	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=255045:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133157501_133182501_52C;SPAN=71169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
4	133374405	255133:1	T	T[4:133374709[	59	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATTTGTATTTTTT;MAPQ=60;MATEID=255133:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133353501_133378501_4C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34
4	133374709	255133:2	A	]4:133374405]A	59	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATTTGTATTTTTT;MAPQ=60;MATEID=255133:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133353501_133378501_4C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34
4	133589596	480393:1	C	[8:138632595[C	17	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=480393:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_138621001_138646001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:6:3:-17.41:18.87
4	133589882	255192:1	G	G]6:35915816]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=255192:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:133589882(+)-6:35915816(+)__4_133574001_133599001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
4	134233891	255396:1	A	[4:134237140[A	52	PASS	DISC_MAPQ=44;EVDNC=ASDIS;INSERTION=ACTTTATACAAATGGAGAA;MAPQ=60;MATEID=255396:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_134235501_134260501_0C;SPAN=3249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:14:9:-53.39:53.39
4	134237140	255396:2	T	[4:134233891[T	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACTTTATACAAATGGAGAA;MAPQ=60;MATEID=255396:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_134235501_134260501_0C;SPAN=3249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:14:9:-53.39:53.39
4	134345929	255721:1	G	]4:134988026]G	16	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=255721:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134970501_134995501_166C;SPAN=642097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92
4	134511847	255539:1	A	A[4:134514547[	44	PASS	EVDNC=ASSMB;INSERTION=GTACA;MAPQ=60;MATEID=255539:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134505001_134530001_17C;SPAN=2700;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:40:44.9:44.9,0,54.8:17:0:-44.87:44.94
4	134514547	255539:2	T	]4:134511847]T	44	PASS	EVDNC=ASSMB;INSERTION=GTACA;MAPQ=60;MATEID=255539:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134505001_134530001_17C;SPAN=2700;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:40:44.9:44.9,0,54.8:17:0:-44.87:44.94
4	134969975	259711:1	G	[4:147282100[G	46	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=AATGAG;MAPQ=60;MATEID=259711:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_147269501_147294501_1C;SPAN=12312125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:9:12:-46.99:46.99
4	134988026	255721:2	G	G[4:134345929[	16	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=255721:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134970501_134995501_166C;SPAN=642097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92
4	135006396	255745:1	G	G[4:135006703[	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTGCTATACAG;MAPQ=60;MATEID=255745:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134995001_135020001_94C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:32:2.1:82.5,2.1,0:27:0:-85.01:85.01
4	135006703	255745:2	A	]4:135006396]A	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTGCTATACAG;MAPQ=60;MATEID=255745:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134995001_135020001_94C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:32:2.1:82.5,2.1,0:27:0:-85.01:85.01
4	135169406	505978:1	T	[9:94543397[T	22	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=505978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:135169406(-)-9:94543397(-)__9_94521001_94546001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
4	135304935	692387:1	A	A[14:37047457[	21	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=692387:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37044001_37069001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
4	137443236	262665:1	A	[4:155418929[A	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=262665:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155403501_155428501_47C;SPAN=17975693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:6:2:-17.77:17.94
4	138045057	256843:1	G	G[4:138046065[	99	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=256843:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_4_138033001_138058001_16C;SPAN=1008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:24:13.2:145.2,13.2,0:48:0:-145.2:145.2
4	138046065	256843:2	A	]4:138045057]A	99	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=256843:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_4_138033001_138058001_16C;SPAN=1008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:24:13.2:145.2,13.2,0:48:0:-145.2:145.2
4	138547813	257017:1	A	A[4:138552061[	61	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=257017:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:138547813(+)-4:138552061(-)__4_138547501_138572501D;SPAN=4248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:263:61.6:61.6,0,599.6:0:41:-61.41:87.27
4	138552061	257017:2	A	]4:138547813]A	61	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=257017:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:138547813(+)-4:138552061(-)__4_138547501_138572501D;SPAN=4248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:263:61.6:61.6,0,599.6:0:41:-61.41:87.27
4	139693884	257428:2	T	[4:124756824[T	82	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AGGA;INSERTION=ACTCTTGTCCTTATTATTTCAGCTTGGCTAAAAGCCGTATTCCTTGTATGCTTTTATTGTTTTTCTGGTTCAACAAC;MAPQ=60;MATEID=257428:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_139674501_139699501_7C;SPAN=14937060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:27:7.5:82.5,7.5,0:22:6:-81.99:81.99
4	139694008	464091:1	A	A[8:96173027[	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=464091:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_54C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06
4	139733131	477489:1	G	]8:131152906]G	31	PASS	EVDNC=ASSMB;INSERTION=ATCTGCATTTTT;MAPQ=60;MATEID=477489:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131148501_131173501_29C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
4	139735224	257457:1	T	T[4:153212136[	23	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=257457:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139723501_139748501_83C;SPAN=13476912;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
4	139854667	257492:1	C	]4:139854797]C	23	PASS	EVDNC=ASSMB;INSERTION=GCTCTC;MAPQ=60;MATEID=257492:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139846001_139871001_88C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18
4	139854797	257492:2	C	C[4:139854667[	23	PASS	EVDNC=ASSMB;INSERTION=GCTCTC;MAPQ=60;MATEID=257492:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139846001_139871001_88C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18
4	140519225	257763:1	C	C[4:140520652[	31	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=257763:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:140519225(+)-4:140520652(-)__4_140507501_140532501D;SPAN=1427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:0:12:-30.9:31.08
4	140520652	257763:2	A	]4:140519225]A	31	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=257763:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:140519225(+)-4:140520652(-)__4_140507501_140532501D;SPAN=1427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:0:12:-30.9:31.08
4	141260745	479452:1	G	]8:136646564]G	24	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=479452:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_40C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:8:5:-24.86:25.27
4	141260902	464688:1	T	T]8:98214711]	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AA;MAPQ=60;MATEID=464688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_98196001_98221001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:9:2:-27.11:27.11
4	141309629	258016:1	C	C[4:141311909[	60	PASS	EVDNC=ASSMB;HOMSEQ=GAGCC;MAPQ=60;MATEID=258016:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_141291501_141316501_90C;SPAN=2280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
4	141311909	258016:2	G	]4:141309629]G	60	PASS	EVDNC=ASSMB;HOMSEQ=GAGCC;MAPQ=60;MATEID=258016:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_141291501_141316501_90C;SPAN=2280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
4	141316353	262006:1	T	T[4:153664092[	23	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=262006:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_153664001_153689001_70C;SPAN=12347739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
4	142164895	258336:1	T	]4:142303352]T	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=258336:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_142296001_142321001_119C;SPAN=138457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:11:10:-40.81:40.81
4	142231121	258349:1	C	]4:142332597]C	26	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=258349:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_142320501_142345501_26C;SPAN=101476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83
4	142303352	258336:2	T	T[4:142164895[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=258336:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_142296001_142321001_119C;SPAN=138457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:11:10:-40.81:40.81
4	142332597	258349:2	A	A[4:142231121[	26	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=258349:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_142320501_142345501_26C;SPAN=101476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83
4	142696529	479453:1	C	[8:136645913[C	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=479453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:2:-26.26:26.32
4	142696557	258447:2	C	[4:117217097[C	25	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=258447:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_4_142688001_142713001_26C;SPAN=25479460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:9:2:-25.14:25.46
4	143652148	258707:1	T	T[4:143652462[	41	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTTCCTTTCTT;MAPQ=60;MATEID=258707:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_4_143643501_143668501_119C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
4	143652462	258707:2	C	]4:143652148]C	41	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTTCCTTTCTT;MAPQ=60;MATEID=258707:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_4_143643501_143668501_119C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
4	144395295	258967:1	C	C[4:144398754[	99	PASS	DISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=26;MATEID=258967:2;MATENM=34;NM=1;NUMPARTS=2;SCTG=c_4_144378501_144403501_5C;SPAN=3459;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:65:19:18:198,18,0:47:32:-198:198
4	144398754	258967:2	A	]4:144395295]A	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=258967:1;MATENM=1;NM=34;NUMPARTS=2;SCTG=c_4_144378501_144403501_5C;SPAN=3459;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:65:19:18:198,18,0:47:32:-198:198
4	145517661	259212:1	A	A[4:145519299[	37	PASS	EVDNC=ASSMB;HOMSEQ=TTGGCCA;MAPQ=60;MATEID=259212:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_145505501_145530501_34C;SPAN=1638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51
4	145519299	259212:2	T	]4:145517661]T	37	PASS	EVDNC=ASSMB;HOMSEQ=TTGGCCA;MAPQ=60;MATEID=259212:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_145505501_145530501_34C;SPAN=1638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51
4	145607336	259250:2	G	[4:132470632[G	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTAACCCAGACTA;MAPQ=60;MATEID=259250:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_145603501_145628501_39C;SPAN=13136704;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:7:6:-34.76:34.76
4	145607589	489652:1	G	G[9:30288138[	40	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=489652:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_41C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
4	145607890	479457:1	T	T[8:136646252[	16	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=479457:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:145607890(+)-8:136646252(-)__8_136636501_136661501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:36:16.4:16.4,0,72.5:0:8:-16.29:18.4
4	145998429	259347:1	T	T[4:146006589[	99	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=259347:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_4_145995501_146020501_17C;SPAN=8160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:17:11.4:125.4,11.4,0:41:0:-125.4:125.4
4	146006589	259347:2	C	]4:145998429]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=259347:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_4_145995501_146020501_17C;SPAN=8160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:17:11.4:125.4,11.4,0:41:0:-125.4:125.4
4	146286440	259415:1	C	]4:146287045]C	20	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=259415:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:146286440(-)-4:146287045(+)__4_146265001_146290001D;SPAN=605;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:67:20.9:20.9,0,146.3:0:12:-20.78:26.34
4	146287045	259415:2	T	T[4:146286440[	20	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=259415:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:146286440(-)-4:146287045(+)__4_146265001_146290001D;SPAN=605;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:67:20.9:20.9,0,146.3:0:12:-20.78:26.34
4	147282100	259711:2	G	[4:134969975[G	46	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AATGAG;MAPQ=60;MATEID=259711:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_147269501_147294501_1C;SPAN=12312125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:9:12:-46.99:46.99
4	148637296	717675:1	C	C[14:106249864[	18	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=717675:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106232001_106257001_8C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87
4	149239904	260547:1	A	A[4:149240230[	58	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTGGGCTGCTCTA;MAPQ=60;MATEID=260547:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149229501_149254501_71C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
4	149240230	260547:2	A	]4:149239904]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTGGGCTGCTCTA;MAPQ=60;MATEID=260547:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149229501_149254501_71C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
4	149264903	260549:2	T	[4:116655850[T	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=260549:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116655850(-)-4:149264903(-)__4_149254001_149279001D;SPAN=32609053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59
4	149321671	260567:1	T	T[4:149322303[	14	PASS	EVDNC=ASSMB;INSERTION=GTA;MAPQ=60;MATEID=260567:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_149303001_149328001_34C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39
4	149322303	260567:2	T	]4:149321671]T	14	PASS	EVDNC=ASSMB;INSERTION=GTA;MAPQ=60;MATEID=260567:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_149303001_149328001_34C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39
4	149687001	260688:2	A	]1:53954236]A	30	PASS	EVDNC=ASSMB;HOMSEQ=ACATAA;MAPQ=60;MATEID=260688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149670501_149695501_34C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
4	149780119	260717:1	A	]4:149807097]A	23	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=260717:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149793001_149818001_2C;SPAN=26978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15
4	149807097	260717:2	A	A[4:149780119[	23	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=260717:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149793001_149818001_2C;SPAN=26978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15
4	150090161	260794:1	T	]4:150090494]T	14	PASS	EVDNC=ASSMB;HOMSEQ=TTTGGGA;MAPQ=60;MATEID=260794:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150087001_150112001_35C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:42:14.6:14.6,0,90.5:8:0:-14.6:17.8
4	150090494	260794:2	A	A[4:150090161[	14	PASS	EVDNC=ASSMB;HOMSEQ=TTTGGGA;MAPQ=60;MATEID=260794:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150087001_150112001_35C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:42:14.6:14.6,0,90.5:8:0:-14.6:17.8
4	150697691	261070:1	A	]4:150891227]A	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=261070:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_150871001_150896001_14C;SPAN=193536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:3:-19.19:19.19
4	150824964	261103:1	C	C[4:151005890[	29	PASS	EVDNC=ASSMB;HOMSEQ=CACC;MAPQ=60;MATEID=261103:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150993501_151018501_23C;SPAN=180926;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	150889529	261357:1	T	T[4:151614011[	23	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=AC;MAPQ=60;MATEID=261357:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_71C;SPAN=724482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:6:8:-23.53:23.59
4	150891227	261070:2	A	A[4:150697691[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=261070:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_150871001_150896001_14C;SPAN=193536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:3:-19.19:19.19
4	151005890	261103:2	C	]4:150824964]C	29	PASS	EVDNC=ASSMB;HOMSEQ=CACC;MAPQ=60;MATEID=261103:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150993501_151018501_23C;SPAN=180926;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	151419570	261276:1	T	T[4:151420401[	20	PASS	EVDNC=ASSMB;HOMSEQ=GTCTGTTCCTCATTCTT;MAPQ=60;MATEID=261276:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151410001_151435001_2C;SPAN=831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:44:20.6:20.6,0,89.9:10:0:-20.64:23.11
4	151420401	261276:2	G	]4:151419570]G	20	PASS	EVDNC=ASSMB;HOMSEQ=GTCTGTTCCTCATTCTT;MAPQ=60;MATEID=261276:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151410001_151435001_2C;SPAN=831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:44:20.6:20.6,0,89.9:10:0:-20.64:23.11
4	151528024	261359:1	C	]4:151617065]C	47	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=261359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_58C;SPAN=89041;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
4	151538082	261326:2	T	[4:132747922[T	67	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AG;INSERTION=TGGGAAGCAGGGAATTGCTGCTGGAAAGACAACCAGATCATGTCTGCCATAGTGCTCAAAGAAAAATAATTTTAAAGTTACAGAAA;MAPQ=60;MATEID=261326:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151532501_151557501_28C;SPAN=18790160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:30:8:67.4,0,8:16:10:-70.2:70.2
4	151614011	261357:2	A	]4:150889529]A	23	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AC;MAPQ=60;MATEID=261357:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_71C;SPAN=724482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:6:8:-23.53:23.59
4	151617065	261359:2	G	G[4:151528024[	47	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=261359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_58C;SPAN=89041;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
4	151810203	261406:2	G	]4:113846014]G	39	PASS	DISC_MAPQ=25;EVDNC=TSI_G;HOMSEQ=GG;INSERTION=GGTTTTCTAGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTCTTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCGTAATTGCCCTGGCCAGAACTTC;MAPQ=60;MATEID=261406:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151802001_151827001_73C;SPAN=37964189;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:11:3:-39.77:39.77
4	152998534	261761:2	T	[4:127800198[T	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTAA;MAPQ=60;MATEID=261761:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_152978001_153003001_10C;SPAN=25198336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:13:11:-61.54:61.54
4	153093581	262620:1	G	[4:155297937[G	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=262620:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_94C;SPAN=2204356;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:3:4:-13.83:15.94
4	153172444	699197:1	C	]14:55912669]C	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=699197:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_55909001_55934001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:11:9:-36.66:36.66
4	153212136	257457:2	T	]4:139735224]T	23	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=257457:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139723501_139748501_83C;SPAN=13476912;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
4	153256883	698839:1	G	G[14:54749560[	22	PASS	EVDNC=ASSMB;INSERTION=CAAAACGCTAACAAAATAAATAG;MAPQ=60;MATEID=698839:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54733001_54758001_25C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:25:22.7:22.7,0,39.2:9:0:-22.68:22.95
4	153664092	262006:2	G	]4:141316353]G	23	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=262006:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_153664001_153689001_70C;SPAN=12347739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
4	154157039	262258:1	C	C[4:154212720[	62	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=262258:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:154157039(+)-4:154212720(-)__4_154203001_154228001D;SPAN=55681;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:37:29.3:62.3,0,29.3:0:22:-62.79:62.79
4	154157044	988278:1	A	[Un_KN707710v1_decoy:1[A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988278:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_561_1_5701_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:11:9.3:102.3,9.3,0:34:0:-102.3:102.3
4	154212720	262258:2	A	]4:154157039]A	62	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=262258:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:154157039(+)-4:154212720(-)__4_154203001_154228001D;SPAN=55681;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:37:29.3:62.3,0,29.3:0:22:-62.79:62.79
4	155292496	262618:2	A	]4:122721082]A	34	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=262618:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_83C;SPAN=32571414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
4	155293071	462485:1	G	G[8:91551154[	24	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=462485:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_91532001_91557001_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
4	155297937	262620:2	C	[4:153093581[C	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=262620:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_155281001_155306001_94C;SPAN=2204356;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:3:4:-13.83:15.94
4	155418929	262665:2	C	[4:137443236[C	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=262665:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155403501_155428501_47C;SPAN=17975693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:6:2:-17.77:17.94
4	155419067	485690:1	C	C[9:10841158[	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=485690:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_10829001_10854001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:8:0:-19.94:20.25
4	155578868	262731:1	G	G]4:155582329]	43	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=262731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:155578868(+)-4:155582329(+)__4_155575001_155600001D;SPAN=3461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:22:10.4:43.4,0,10.4:0:15:-44.31:44.31
4	155582329	262731:2	C	C]4:155578868]	43	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=262731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:155578868(+)-4:155582329(+)__4_155575001_155600001D;SPAN=3461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:22:10.4:43.4,0,10.4:0:15:-44.31:44.31
4	159532150	263732:1	T	T[4:159613476[	36	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=263732:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:159532150(+)-4:159613476(-)__4_159593001_159618001D;SPAN=81326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
4	159613476	263732:2	T	]4:159532150]T	36	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=263732:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:159532150(+)-4:159613476(-)__4_159593001_159618001D;SPAN=81326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
4	160672642	263986:1	G	]4:160672823]G	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=263986:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_160671001_160696001_4C;SPAN=181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:11:0:-25.91:26.93
4	160672823	263986:2	G	G[4:160672642[	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=263986:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_160671001_160696001_4C;SPAN=181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:11:0:-25.91:26.93
4	162472965	264455:1	G	G[4:162475268[	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=264455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:162472965(+)-4:162475268(-)__4_162459501_162484501D;SPAN=2303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:0:18:-52.81:52.81
4	162475268	264455:2	T	]4:162472965]T	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=264455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:162472965(+)-4:162475268(-)__4_162459501_162484501D;SPAN=2303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:0:18:-52.81:52.81
4	162657493	264507:1	T	[4:162657724[T	29	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=264507:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_162655501_162680501_9C;SPAN=231;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:7:8:-29.71:29.71
4	162657724	264507:2	T	[4:162657493[T	29	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=264507:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_162655501_162680501_9C;SPAN=231;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:7:8:-29.71:29.71
4	164281891	264869:1	T	T[4:164285064[	42	PASS	EVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=264869:2;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_4_164272501_164297501_12C;SPAN=3173;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91
4	164285064	264869:2	A	]4:164281891]A	42	PASS	EVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=264869:1;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_4_164272501_164297501_12C;SPAN=3173;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91
4	165081466	265105:1	C	C[4:165083879[	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:165081466(+)-4:165083879(-)__4_165081001_165106001D;SPAN=2413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:0:12:-36.31:36.31
4	165083879	265105:2	T	]4:165081466]T	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:165081466(+)-4:165083879(-)__4_165081001_165106001D;SPAN=2413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:0:12:-36.31:36.31
4	166756015	265491:1	G	G[4:166761920[	69	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265491:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:166756015(+)-4:166761920(-)__4_166747001_166772001D;SPAN=5905;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:16:6.3:69.3,6.3,0:0:23:-69.32:69.32
4	166761920	265491:2	A	]4:166756015]A	69	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265491:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:166756015(+)-4:166761920(-)__4_166747001_166772001D;SPAN=5905;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:16:6.3:69.3,6.3,0:0:23:-69.32:69.32
4	169359842	697857:1	A	]14:52201132]A	46	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=697857:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:169359842(-)-14:52201132(+)__14_52185001_52210001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21
4	169821466	514776:1	C	[9:120805084[C	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=514776:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120785001_120810001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:6:3:-21.56:22.23
4	169866444	266207:1	A	A]9:120805215]	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=266207:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_169858501_169883501_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:4:6:-25.35:25.35
4	170678003	509629:1	C	]9:106788574]C	20	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=509629:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:170678003(-)-9:106788574(+)__9_106771001_106796001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
4	171453361	266543:1	A	A[4:171458274[	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=266543:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:171453361(+)-4:171458274(-)__4_171451001_171476001D;SPAN=4913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92
4	171458274	266543:2	A	]4:171453361]A	75	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=266543:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:171453361(+)-4:171458274(-)__4_171451001_171476001D;SPAN=4913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92
4	172503881	266785:1	A	A[4:172512370[	42	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=266785:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_4_172504501_172529501_6C;SPAN=8489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91
4	172512370	266785:2	G	]4:172503881]G	42	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=266785:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_4_172504501_172529501_6C;SPAN=8489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91
4	173304401	266947:1	A	]4:173333626]A	29	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=266947:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_173313001_173338001_7C;SPAN=29225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	173333626	266947:2	C	C[4:173304401[	29	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=266947:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_173313001_173338001_7C;SPAN=29225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	173399528	266971:1	A	]4:173399668]A	40	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=266971:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_173386501_173411501_6C;SPAN=140;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
4	173399668	266971:2	A	A[4:173399528[	40	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=266971:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_173386501_173411501_6C;SPAN=140;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
4	173611967	267043:1	A	A[4:173614735[	26	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=267043:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:173611967(+)-4:173614735(-)__4_173607001_173632001D;SPAN=2768;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	173614735	267043:2	A	]4:173611967]A	26	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=267043:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:173611967(+)-4:173614735(-)__4_173607001_173632001D;SPAN=2768;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	178332605	268281:1	A	]4:178333677]A	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAG;MAPQ=60;MATEID=268281:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_178311001_178336001_12C;SPAN=1072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:23:17:-85.82:85.82
4	178332737	268282:1	T	T[4:178333677[	60	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=268282:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_4_178311001_178336001_13C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
4	178333677	268281:2	G	G[4:178332605[	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAG;MAPQ=60;MATEID=268281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_178311001_178336001_12C;SPAN=1072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:23:17:-85.82:85.82
4	178333677	268282:2	G	]4:178332737]G	60	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=268282:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_4_178311001_178336001_13C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
4	179498878	268551:1	C	]4:179517058]C	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCCTTTACTACTAACTTTAGGACAATAAGTCCTTTA;MAPQ=60;MATEID=268551:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_179511501_179536501_17C;SPAN=18180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:15:15.5:15.5,0,22.1:4:4:-15.59:15.65
4	179517058	268551:2	G	G[4:179498878[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCCTTTACTACTAACTTTAGGACAATAAGTCCTTTA;MAPQ=60;MATEID=268551:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_179511501_179536501_17C;SPAN=18180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:15:15.5:15.5,0,22.1:4:4:-15.59:15.65
4	179791878	268623:1	A	A[4:179792358[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTA;MAPQ=60;MATEID=268623:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_179781001_179806001_1C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:15:0.9:39.6,0.9,0:8:7:-41.34:41.34
4	179792358	268623:2	G	]4:179791878]G	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTA;MAPQ=60;MATEID=268623:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_179781001_179806001_1C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:15:0.9:39.6,0.9,0:8:7:-41.34:41.34
4	179989520	268718:1	A	A[4:180052226[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=268718:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:179989520(+)-4:180052226(-)__4_180050501_180075501D;SPAN=62706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	180052226	268718:2	C	]4:179989520]C	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=268718:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:179989520(+)-4:180052226(-)__4_180050501_180075501D;SPAN=62706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	180759783	268996:1	G	G[4:180863357[	26	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=268996:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_180859001_180884001_26C;SPAN=103574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:2:2.4:26.4,2.4,0:9:0:-26.41:26.41
4	180855405	269019:1	A	A[4:181404211[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGGTAA;MAPQ=60;MATEID=269019:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_181398001_181423001_0C;SPAN=548806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:2:3.3:36.3,3.3,0:10:6:-36.31:36.31
4	180863357	268996:2	A	]4:180759783]A	26	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=268996:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_180859001_180884001_26C;SPAN=103574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:2:2.4:26.4,2.4,0:9:0:-26.41:26.41
4	180878348	269006:1	T	T[4:180927019[	56	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269006:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_180908001_180933001_1C;SPAN=48671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:4:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	180927019	269006:2	T	]4:180878348]T	56	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269006:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_180908001_180933001_1C;SPAN=48671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:4:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	180955649	269010:1	T	T[4:180957136[	19	PASS	EVDNC=ASSMB;HOMSEQ=CTCTACAGCACTTTCT;MAPQ=60;MATEID=269010:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_180957001_180982001_9C;SPAN=1487;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:2:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	180957136	269010:2	C	]4:180955649]C	19	PASS	EVDNC=ASSMB;HOMSEQ=CTCTACAGCACTTTCT;MAPQ=60;MATEID=269010:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_180957001_180982001_9C;SPAN=1487;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:2:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	180961713	269081:1	G	G[4:181779193[	33	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=269081:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_181765501_181790501_21C;SPAN=817480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:11:0:-33.01:33.01
4	181404211	269019:2	C	]4:180855405]C	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGGTAA;MAPQ=60;MATEID=269019:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_181398001_181423001_0C;SPAN=548806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:2:3.3:36.3,3.3,0:10:6:-36.31:36.31
4	181779193	269081:2	T	]4:180961713]T	33	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=269081:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_181765501_181790501_21C;SPAN=817480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:11:0:-33.01:33.01
4	181891336	269122:1	T	T[4:181952530[	19	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269122:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_181937001_181962001_3C;SPAN=61194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:1:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	181952530	269122:2	T	]4:181891336]T	19	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269122:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_181937001_181962001_3C;SPAN=61194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:1:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	182335217	477262:1	G	[8:130535526[G	99	PASS	DISC_MAPQ=42;EVDNC=ASDIS;MAPQ=60;MATEID=477262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_130511501_130536501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:25:10.5:115.5,10.5,0:27:19:-115.5:115.5
4	183247605	330678:1	C	]6:21456465]C	23	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CTATATATACTATATATA;MAPQ=60;MATEID=330678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21437501_21462501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:7:3:-24.05:24.05
4	183382550	269465:1	T	T[4:183382860[	46	PASS	EVDNC=ASSMB;HOMSEQ=ATAGCACTTTCTTT;MAPQ=60;MATEID=269465:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_183382501_183407501_9C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21
4	183382860	269465:2	A	]4:183382550]A	46	PASS	EVDNC=ASSMB;HOMSEQ=ATAGCACTTTCTTT;MAPQ=60;MATEID=269465:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_183382501_183407501_9C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21
4	184579575	269806:1	C	]4:184601585]C	23	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=269806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_184583001_184608001_4C;SPAN=22010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74
4	184601585	269806:2	G	G[4:184579575[	23	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=269806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_184583001_184608001_4C;SPAN=22010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74
4	185129516	269933:1	A	A[4:185129779[	8	PASS	EVDNC=ASSMB;HOMSEQ=TGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=269933:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_185122001_185147001_10C;SPAN=263;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:18:8.3:8.3,0,34.7:4:0:-8.144:9.2
4	185129779	269933:2	T	]4:185129516]T	8	PASS	EVDNC=ASSMB;HOMSEQ=TGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=269933:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_185122001_185147001_10C;SPAN=263;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:18:8.3:8.3,0,34.7:4:0:-8.144:9.2
4	185520603	270120:1	T	T[4:185522919[	69	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=270120:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:185520603(+)-4:185522919(-)__4_185514001_185539001D;SPAN=2316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
4	185522919	270120:2	G	]4:185520603]G	69	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=270120:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:185520603(+)-4:185522919(-)__4_185514001_185539001D;SPAN=2316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
4	188222216	270910:1	G	]4:188276133]G	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=270910:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_188258001_188283001_23C;SPAN=53917;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:7:8:-36.31:36.31
4	188276133	270910:2	G	G[4:188222216[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=270910:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_188258001_188283001_23C;SPAN=53917;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:7:8:-36.31:36.31
4	188373022	270971:1	G	]4:188373147]G	64	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=270971:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_188356001_188381001_5C;SPAN=125;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65
4	188373147	270971:2	A	A[4:188373022[	64	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=270971:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_188356001_188381001_5C;SPAN=125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65
4	188802177	271163:2	G	]4:116186292]G	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=271163:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_188797001_188822001_5C;SPAN=72615885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:3:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	189136860	271284:1	T	T[4:189143119[	46	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATTACCCAGTCT;MAPQ=60;MATEID=271284:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_4_189140001_189165001_16C;SPAN=6259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:5:4.2:46.2,4.2,0:15:0:-46.21:46.21
4	189143119	271284:2	A	]4:189136860]A	46	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATTACCCAGTCT;MAPQ=60;MATEID=271284:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_4_189140001_189165001_16C;SPAN=6259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:5:4.2:46.2,4.2,0:15:0:-46.21:46.21
4	189449410	271447:1	G	G[4:189450079[	36	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=271447:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_189434001_189459001_5C;SPAN=669;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38
4	189450079	271447:2	G	]4:189449410]G	36	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=271447:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_189434001_189459001_5C;SPAN=669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38
4	189508176	271479:1	T	]4:189508329]T	61	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=271479:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_189507501_189532501_6C;SPAN=153;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:27:5.6:61.7,0,5.6:21:0:-64.38:64.38
4	189508329	271479:2	T	T[4:189508176[	61	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=271479:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_189507501_189532501_6C;SPAN=153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:27:5.6:61.7,0,5.6:21:0:-64.38:64.38
4	189948866	870919:1	T	T[20:29088471[	3	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=870919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:189948866(+)-20:29088471(-)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:81:3.8:3.8,0,198.5:0:8:-3.64:15.33
5	15864	322397:1	C	]6:150718]C	99	PASS	DISC_MAPQ=17;EVDNC=TSI_L;HOMSEQ=CTT;MAPQ=52;MATEID=322397:2;MATENM=6;NM=5;NUMPARTS=3;REPSEQ=TTT;SCTG=c_6_147001_172001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:30:10.8:118.8,10.8,0:32:13:-118.8:118.8
5	231835	272233:1	C	C[5:232743[	72	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=272233:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:231835(+)-5:232743(-)__5_220501_245501D;SPAN=908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:18:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	232743	272233:2	A	]5:231835]A	72	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=272233:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:231835(+)-5:232743(-)__5_220501_245501D;SPAN=908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:18:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	281934	272313:1	C	C]Un_KN707921v1_decoy:2561]	25	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=C;MAPQ=60;MATEID=272313:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_5_269501_294501_90C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46
5	693023	272546:1	C	C[5:784461[	40	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=272546:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:693023(+)-5:784461(-)__5_759501_784501D;SPAN=91438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:0:14:-41.11:41.11
5	697422	272493:1	G	]5:788754]G	18	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=272493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:697422(-)-5:788754(+)__5_686001_711001D;SPAN=91332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
5	710054	272506:1	T	]5:795262]T	18	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=272506:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:710054(-)-5:795262(+)__5_686001_711001D;SPAN=85208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
5	711897	272511:1	C	C[5:796051[	59	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTCCCAGTACTGTGCTC;MAPQ=60;MATEID=272511:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_710501_735501_41C;SPAN=84154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:13:8:-59.41:59.41
5	754009	272532:1	T	]5:754663]T	37	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=272532:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:754009(-)-5:754663(+)__5_735001_760001D;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:68:37.1:37.1,0,132.8:0:17:-37:40.1
5	754663	272532:2	G	G[5:754009[	37	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=272532:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:754009(-)-5:754663(+)__5_735001_760001D;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:68:37.1:37.1,0,132.8:0:17:-37:40.1
5	784461	272546:2	C	]5:693023]C	40	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=272546:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:693023(+)-5:784461(-)__5_759501_784501D;SPAN=91438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:0:14:-41.11:41.11
5	788754	272493:2	G	G[5:697422[	18	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=272493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:697422(-)-5:788754(+)__5_686001_711001D;SPAN=91332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
5	795262	272506:2	T	T[5:710054[	18	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=272506:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:710054(-)-5:795262(+)__5_686001_711001D;SPAN=85208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
5	796051	272511:2	T	]5:711897]T	59	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TTCCCAGTACTGTGCTC;MAPQ=31;MATEID=272511:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_710501_735501_41C;SPAN=84154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:13:8:-59.41:59.41
5	1044616	272655:1	T	]5:1045417]T	94	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=272655:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1044616(-)-5:1045417(+)__5_1029001_1054001D;SPAN=801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:39:2.3:94.7,0,2.3:0:32:-99.78:99.78
5	1045417	272655:2	T	T[5:1044616[	94	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=272655:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1044616(-)-5:1045417(+)__5_1029001_1054001D;SPAN=801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:39:2.3:94.7,0,2.3:0:32:-99.78:99.78
5	1178274	272733:1	C	C[5:1180617[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=272733:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1178274(+)-5:1180617(-)__5_1176001_1201001D;SPAN=2343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6
5	1180617	272733:2	A	]5:1178274]A	99	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=272733:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1178274(+)-5:1180617(-)__5_1176001_1201001D;SPAN=2343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6
5	1364018	694524:1	C	[14:42561542[C	39	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=694524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42556501_42581501_72C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:5:11:-39.39:39.39
5	1845407	273027:1	C	]5:1846001]C	99	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=CTCTCTCTATCTCTATATGTGTCTCCATCTCTGTCTCTATCTCTAT;MAPQ=19;MATEID=273027:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_1837501_1862501_44C;SPAN=594;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:49:13.5:148.5,13.5,0:28:25:-146.9:146.9
5	1846001	273027:2	T	T[5:1845407[	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTCTCTCTATCTCTATATGTGTCTCCATCTCTGTCTCTATCTCTAT;MAPQ=60;MATEID=273027:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_1837501_1862501_44C;SPAN=594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:49:13.5:148.5,13.5,0:28:25:-146.9:146.9
5	1941042	273098:1	T	T[5:1941341[	82	PASS	EVDNC=ASSMB;HOMSEQ=GGAAAAATTTCT;MAPQ=60;MATEID=273098:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1935501_1960501_21C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:22:7.5:82.5,7.5,0:27:0:-82.52:82.52
5	1941341	273098:2	G	]5:1941042]G	82	PASS	EVDNC=ASSMB;HOMSEQ=GGAAAAATTTCT;MAPQ=60;MATEID=273098:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1935501_1960501_21C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:22:7.5:82.5,7.5,0:27:0:-82.52:82.52
5	1950911	273108:1	G	G[5:1951342[	79	PASS	EVDNC=ASSMB;HOMSEQ=GTCGTCTGCTGTG;MAPQ=60;MATEID=273108:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_1935501_1960501_49C;SPAN=431;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68
5	1951342	273108:2	G	]5:1950911]G	79	PASS	EVDNC=ASSMB;HOMSEQ=GTCGTCTGCTGTG;MAPQ=60;MATEID=273108:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_1935501_1960501_49C;SPAN=431;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68
5	1968299	273121:1	G	G[5:1971470[	35	PASS	EVDNC=ASSMB;HOMSEQ=AAATAAAGAAAATTGTGG;MAPQ=60;MATEID=273121:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1960001_1985001_15C;SPAN=3171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:190:35.8:35.8,0,441.8:27:0:-35.72:56.29
5	1971470	273121:2	A	]5:1968299]A	35	PASS	EVDNC=ASSMB;HOMSEQ=AAATAAAGAAAATTGTGG;MAPQ=60;MATEID=273121:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1960001_1985001_15C;SPAN=3171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:190:35.8:35.8,0,441.8:27:0:-35.72:56.29
5	2145979	273172:1	A	A[5:2146365[	21	PASS	DISC_MAPQ=6;EVDNC=ASDIS;INSERTION=AGTCCAGAGCCTCCACCTCCTG;MAPQ=26;MATEID=273172:2;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_5_2131501_2156501_26C;SPAN=386;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:78:21.2:21.2,0,173:8:5:-20.99:28.09
5	2146365	273172:2	A	]5:2145979]A	21	PASS	DISC_MAPQ=2;EVDNC=ASDIS;INSERTION=AGTCCAGAGCCTCCACCTCCTG;MAPQ=10;MATEID=273172:1;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_5_2131501_2156501_26C;SPAN=386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:78:21.2:21.2,0,173:8:5:-20.99:28.09
5	3499159	273747:1	T	T[5:3499469[	18	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCAGACAT;MAPQ=60;MATEID=273747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_126C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
5	3499469	273747:2	A	]5:3499159]A	18	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCAGACAT;MAPQ=60;MATEID=273747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_126C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
5	3502213	273749:1	T	T[5:3502528[	0	PASS	EVDNC=ASSMB;HOMSEQ=CAAAATTTATTTTT;MAPQ=60;MATEID=273749:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_162C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:123:14.4:0,14.4,336.6:6:0:14.77:9.6
5	3502528	273749:2	C	]5:3502213]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CAAAATTTATTTTT;MAPQ=60;MATEID=273749:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_162C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:123:14.4:0,14.4,336.6:6:0:14.77:9.6
5	5930999	274695:1	A	]5:5931169]A	19	PASS	EVDNC=ASSMB;HOMSEQ=ATAATGCATGCCTGAATGTGTGCA;MAPQ=60;MATEID=274695:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_5929001_5954001_66C;SPAN=170;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:10:0:-19.52:22.68
5	5931169	274695:2	A	A[5:5930999[	19	PASS	EVDNC=ASSMB;HOMSEQ=ATAATGCATGCCTGAATGTGTGCA;MAPQ=60;MATEID=274695:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_5929001_5954001_66C;SPAN=170;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:10:0:-19.52:22.68
5	6481317	274867:1	C	]5:6505336]C	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AACAGA;MAPQ=60;MATEID=274867:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_6492501_6517501_47C;SPAN=24019;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:5:11:-35.78:35.78
5	6505336	274867:2	C	C[5:6481317[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AACAGA;MAPQ=60;MATEID=274867:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_6492501_6517501_47C;SPAN=24019;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:5:11:-35.78:35.78
5	7372255	275284:1	C	]5:7372743]C	32	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=275284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_7350001_7375001_31C;SPAN=488;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:5:9:-32.59:32.59
5	7372743	275284:2	A	A[5:7372255[	32	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=5;MATEID=275284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_7350001_7375001_31C;SPAN=488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:5:9:-32.59:32.59
5	8557583	275732:1	T	]5:8573594]T	12	PASS	EVDNC=ASSMB;INSERTION=AACTAAGGATAGTCTTTTT;MAPQ=60;MATEID=275732:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_8550501_8575501_60C;SPAN=16011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
5	8573594	275732:2	G	G[5:8557583[	12	PASS	EVDNC=ASSMB;INSERTION=AACTAAGGATAGTCTTTTT;MAPQ=60;MATEID=275732:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_8550501_8575501_60C;SPAN=16011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
5	8897316	284229:1	C	]5:28844816]C	50	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=284229:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28836501_28861501_24C;SPAN=19947500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:18:0:-51.49:51.49
5	9400507	276045:1	T	T[5:9400769[	29	PASS	EVDNC=ASSMB;HOMSEQ=ACATTTTTT;MAPQ=60;MATEID=276045:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_9383501_9408501_9C;SPAN=262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
5	9400769	276045:2	A	]5:9400507]A	29	PASS	EVDNC=ASSMB;HOMSEQ=ACATTTTTT;MAPQ=60;MATEID=276045:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_9383501_9408501_9C;SPAN=262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
5	10005166	276277:1	T	T[5:10005471[	99	PASS	DISC_MAPQ=53;EVDNC=ASDIS;INSERTION=CAC;MAPQ=60;MATEID=276277:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_9996001_10021001_17C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:70:19:19.5:214.5,19.5,0:58:17:-214.6:214.6
5	10005471	276277:2	A	]5:10005166]A	99	PASS	DISC_MAPQ=28;EVDNC=ASDIS;INSERTION=CAC;MAPQ=60;MATEID=276277:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_9996001_10021001_17C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:70:19:19.5:214.5,19.5,0:58:17:-214.6:214.6
5	10336485	276443:1	G	G[5:10336766[	2	PASS	EVDNC=ASSMB;HOMSEQ=CTGCACTCCAGCCTGGG;MAPQ=60;MATEID=276443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10314501_10339501_45C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:50:2.6:2.6,0,121.4:5:0:-2.45:9.611
5	10336766	276443:2	C	]5:10336485]C	2	PASS	EVDNC=ASSMB;HOMSEQ=CTGCACTCCAGCCTGGG;MAPQ=60;MATEID=276443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10314501_10339501_45C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:50:2.6:2.6,0,121.4:5:0:-2.45:9.611
5	10756070	276612:1	C	C[5:10756404[	23	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=276612:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10755501_10780501_80C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18
5	10756404	276612:2	G	]5:10756070]G	23	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=276612:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10755501_10780501_80C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18
5	11160451	276825:1	A	A[5:11399503[	18	PASS	EVDNC=ASSMB;INSERTION=TTATCTCATACAAT;MAPQ=60;MATEID=276825:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11392501_11417501_15C;SPAN=239052;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
5	11399503	276825:2	C	]5:11160451]C	18	PASS	EVDNC=ASSMB;INSERTION=TTATCTCATACAAT;MAPQ=60;MATEID=276825:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11392501_11417501_15C;SPAN=239052;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
5	11578757	276958:1	T	]5:11859207]T	20	PASS	EVDNC=ASSMB;HOMSEQ=TTAA;MAPQ=60;MATEID=276958:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11858001_11883001_108C;SPAN=280450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
5	11593958	276916:1	A	]5:11696236]A	47	PASS	EVDNC=ASSMB;HOMSEQ=ATAAAACT;MAPQ=60;MATEID=276916:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_11686501_11711501_17C;SPAN=102278;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03
5	11655906	303817:1	T	[5:94472477[T	23	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=303817:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_94472001_94497001_10C;SPAN=82816571;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:6:4:-24.74:24.74
5	11696236	276916:2	T	T[5:11593958[	47	PASS	EVDNC=ASSMB;HOMSEQ=ATAAAACT;MAPQ=60;MATEID=276916:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_11686501_11711501_17C;SPAN=102278;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03
5	11859207	276958:2	A	A[5:11578757[	20	PASS	EVDNC=ASSMB;HOMSEQ=TTAA;MAPQ=60;MATEID=276958:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11858001_11883001_108C;SPAN=280450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
5	12186388	277088:1	T	T[5:12186680[	10	PASS	EVDNC=ASSMB;HOMSEQ=AGTATTTTGTTCT;MAPQ=60;MATEID=277088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_12176501_12201501_61C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:35:10.1:10.1,0,76.1:6:0:-9.968:13.04
5	12186680	277088:2	A	]5:12186388]A	10	PASS	EVDNC=ASSMB;HOMSEQ=AGTATTTTGTTCT;MAPQ=60;MATEID=277088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_12176501_12201501_61C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:35:10.1:10.1,0,76.1:6:0:-9.968:13.04
5	13416495	277704:1	C	C[5:13422742[	92	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATCACGTCAACC;MAPQ=60;MATEID=277704:2;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_5_13401501_13426501_95C;SPAN=6247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:31:8.4:92.4,8.4,0:29:0:-92.42:92.42
5	13422742	277704:2	G	]5:13416495]G	92	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATCACGTCAACC;MAPQ=60;MATEID=277704:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_5_13401501_13426501_95C;SPAN=6247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:31:8.4:92.4,8.4,0:29:0:-92.42:92.42
5	16124701	278656:1	A	A[5:16125383[	15	PASS	EVDNC=ASSMB;INSERTION=TAGAA;MAPQ=60;MATEID=278656:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_16121001_16146001_70C;SPAN=682;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:63:15.5:15.5,0,140.9:10:0:-15.3:21.37
5	16125383	278656:2	C	]5:16124701]C	15	PASS	EVDNC=ASSMB;INSERTION=TAGAA;MAPQ=60;MATEID=278656:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_16121001_16146001_70C;SPAN=682;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:63:15.5:15.5,0,140.9:10:0:-15.3:21.37
5	16556459	278904:1	T	]5:16743998]T	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=278904:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_16733501_16758501_7C;SPAN=187539;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:5:6:-22.05:23.72
5	16743998	278904:2	T	T[5:16556459[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=278904:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_16733501_16758501_7C;SPAN=187539;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:5:6:-22.05:23.72
5	17508114	279336:1	C	]5:17621777]C	15	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=279336:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508114(-)-5:17621777(+)__5_17615501_17640501D;SPAN=113663;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:39:15.5:15.5,0,81.5:0:8:-15.45:18.09
5	17508349	279337:1	G	G[5:17622087[	50	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=279337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508349(+)-5:17622087(-)__5_17615501_17640501D;SPAN=113738;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:0:18:-49.98:49.98
5	17621777	279336:2	T	T[5:17508114[	15	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=279336:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508114(-)-5:17621777(+)__5_17615501_17640501D;SPAN=113663;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:39:15.5:15.5,0,81.5:0:8:-15.45:18.09
5	17622087	279337:2	C	]5:17508349]C	50	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=279337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508349(+)-5:17622087(-)__5_17615501_17640501D;SPAN=113738;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:0:18:-49.98:49.98
5	19375266	280181:1	A	A[5:19376287[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280181:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:19375266(+)-5:19376287(-)__5_19355001_19380001D;SPAN=1021;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3
5	19376287	280181:2	C	]5:19375266]C	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=280181:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:19375266(+)-5:19376287(-)__5_19355001_19380001D;SPAN=1021;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3
5	20832371	280763:1	T	[5:34371648[T	17	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=280763:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20832371(-)-5:34371648(-)__5_20825001_20850001D;SPAN=13539277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
5	20834797	280766:1	T	T]5:34371504]	10	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280766:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20834797(+)-5:34371504(+)__5_20825001_20850001D;SPAN=13536707;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:57:10.4:10.4,0,132.5:0:8:-10.39:16.63
5	20849244	280776:1	T	]5:20854316]T	32	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=19;MATEID=280776:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_20825001_20850001_93C;SPAN=5072;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:48:32.9:32.9,0,85.7:10:10:-32.72:34.13
5	20854316	280776:2	G	G[5:20849244[	32	PASS	DISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=43;MATEID=280776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_20825001_20850001_93C;SPAN=5072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:48:32.9:32.9,0,85.7:10:10:-32.72:34.13
5	21149159	280926:1	C	]5:21172268]C	75	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=280926:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_21168001_21193001_24C;SPAN=23109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88
5	21172268	280926:2	A	A[5:21149159[	75	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=280926:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_21168001_21193001_24C;SPAN=23109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88
5	21207604	280936:2	T	]4:79973439]T	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280936:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:79973439(+)-5:21207604(-)__5_21192501_21217501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:36:9.9:108.9,9.9,0:0:34:-108.9:108.9
5	21450121	281078:1	T	T[5:21452317[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=281078:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:21450121(+)-5:21452317(-)__5_21437501_21462501D;SPAN=2196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:6:11.7:128.7,11.7,0:0:42:-128.7:128.7
5	21452317	281078:2	T	]5:21450121]T	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=281078:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:21450121(+)-5:21452317(-)__5_21437501_21462501D;SPAN=2196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:6:11.7:128.7,11.7,0:0:42:-128.7:128.7
5	22796516	281614:1	T	T[5:22796820[	17	PASS	EVDNC=ASSMB;HOMSEQ=CAGATTTTTTATCTT;MAPQ=60;MATEID=281614:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_22785001_22810001_61C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:46:17:17,0,96.2:9:0:-16.78:20.14
5	22796820	281614:2	C	]5:22796516]C	17	PASS	EVDNC=ASSMB;HOMSEQ=CAGATTTTTTATCTT;MAPQ=60;MATEID=281614:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_22785001_22810001_61C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:46:17:17,0,96.2:9:0:-16.78:20.14
5	23902973	282017:1	C	C[5:23905101[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=282017:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:23902973(+)-5:23905101(-)__5_23887501_23912501D;SPAN=2128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:12:11.1:122.1,11.1,0:0:40:-122.1:122.1
5	23905101	282017:2	A	]5:23902973]A	99	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=282017:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:23902973(+)-5:23905101(-)__5_23887501_23912501D;SPAN=2128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:12:11.1:122.1,11.1,0:0:40:-122.1:122.1
5	24370433	282268:1	T	T[5:24373328[	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAACAAAATTTTT;MAPQ=60;MATEID=282268:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_5_24353001_24378001_2C;SPAN=2895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:111:99:167,0,110.9:60:0:-167.4:167.4
5	24373328	282268:2	T	]5:24370433]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAACAAAATTTTT;MAPQ=60;MATEID=282268:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_5_24353001_24378001_2C;SPAN=2895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:111:99:167,0,110.9:60:0:-167.4:167.4
5	24776152	282465:1	T	]5:24783207]T	0	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=282465:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_24769501_24794501_13C;SPAN=7055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:85:0.6:0,0.6,214.5:7:0:0.7858:12.84
5	24783207	282465:2	T	T[5:24776152[	0	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=282465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_24769501_24794501_13C;SPAN=7055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:85:0.6:0,0.6,214.5:7:0:0.7858:12.84
5	25623489	282763:1	A	]5:25625607]A	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAATTAAACGCAATTAACCTCACAATTAA;MAPQ=60;MATEID=282763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_25602501_25627501_20C;SPAN=2118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:64:48.2:48.2,0,110.9:16:10:-48.03:49.48
5	25625607	282763:2	C	C[5:25623489[	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAATTAAACGCAATTAACCTCACAATTAA;MAPQ=60;MATEID=282763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_25602501_25627501_20C;SPAN=2118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:64:48.2:48.2,0,110.9:16:10:-48.03:49.48
5	26119052	283048:1	T	T[5:26119284[	14	PASS	EVDNC=ASSMB;HOMSEQ=TTTACT;MAPQ=60;MATEID=283048:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26117001_26142001_22C;SPAN=232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:54:14.6:14.6,0,120.2:9:0:-14.53:19.44
5	26119284	283048:2	T	]5:26119052]T	14	PASS	EVDNC=ASSMB;HOMSEQ=TTTACT;MAPQ=60;MATEID=283048:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26117001_26142001_22C;SPAN=232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:54:14.6:14.6,0,120.2:9:0:-14.53:19.44
5	26172289	283066:1	G	G[5:26172699[	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAAA;MAPQ=60;MATEID=283066:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26166001_26191001_68C;SPAN=410;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:7:4:-17.06:20.24
5	26172699	283066:2	A	]5:26172289]A	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAAA;MAPQ=60;MATEID=283066:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26166001_26191001_68C;SPAN=410;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:7:4:-17.06:20.24
5	26230726	283092:2	C	C[3:165861102[	39	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=283092:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:165861102(-)-5:26230726(+)__5_26215001_26240001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:0:13:-39.61:39.61
5	26667517	283242:1	T	T[5:26667749[	41	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=283242:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26656001_26681001_15C;SPAN=232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:63:41.9:41.9,0,114.5:18:0:-41.71:43.69
5	26667749	283242:2	G	]5:26667517]G	41	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=283242:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26656001_26681001_15C;SPAN=232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:63:41.9:41.9,0,114.5:18:0:-41.71:43.69
5	26796592	283294:1	T	T[5:26801788[	99	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=283294:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_5_26778501_26803501_167C;SPAN=5196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:34:13.2:145.2,13.2,0:48:0:-145.2:145.2
5	26801788	283294:2	T	]5:26796592]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=283294:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_5_26778501_26803501_167C;SPAN=5196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:34:13.2:145.2,13.2,0:48:0:-145.2:145.2
5	27870154	283814:1	C	]5:27889118]C	25	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=TAGTTTT;MAPQ=60;MATEID=283814:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_27881001_27906001_7C;SPAN=18964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:7:6:-25.42:25.66
5	27889118	283814:2	C	C[5:27870154[	25	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TAGTTTT;MAPQ=60;MATEID=283814:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_27881001_27906001_7C;SPAN=18964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:7:6:-25.42:25.66
5	28235202	283944:2	T	T[1:53954687[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=283944:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28224001_28249001_78C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:9:10:-38.69:38.69
5	28813472	284223:1	G	G[5:28813723[	2	PASS	EVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=284223:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28812001_28837001_53C;SPAN=251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:60:2.9:2.9,0,148.1:6:0:-2.941:11.53
5	28813723	284223:2	C	]5:28813472]C	2	PASS	EVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=284223:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28812001_28837001_53C;SPAN=251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:60:2.9:2.9,0,148.1:6:0:-2.941:11.53
5	28844816	284229:2	C	C[5:8897316[	50	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=284229:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28836501_28861501_24C;SPAN=19947500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:18:0:-51.49:51.49
5	28932560	284280:1	A	A]5:28935019]	28	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=284280:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:28932560(+)-5:28935019(+)__5_28910001_28935001D;SPAN=2459;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:0:11:-28.44:28.58
5	28932749	284281:1	A	[5:28934786[A	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTGAAGAAATAGT;MAPQ=60;MATEID=284281:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_28910001_28935001_130C;SPAN=2037;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:63:71.6:84.8,0,71.6:26:5:-84.66:84.66
5	28934786	284281:2	T	[5:28932749[T	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTGAAGAAATAGT;MAPQ=60;MATEID=284281:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_28910001_28935001_130C;SPAN=2037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:63:71.6:84.8,0,71.6:26:5:-84.66:84.66
5	28935019	284280:2	T	T]5:28932560]	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=284280:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:28932560(+)-5:28935019(+)__5_28910001_28935001D;SPAN=2459;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:0:11:-28.44:28.58
5	31190135	285245:1	T	[5:31191075[T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=285245:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_31188501_31213501_4C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:50:13.8:151.8,13.8,0:33:31:-151.8:151.8
5	31191075	285245:2	A	[5:31190135[A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=285245:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_31188501_31213501_4C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:50:13.8:151.8,13.8,0:33:31:-151.8:151.8
5	33830191	286429:1	A	]5:34171242]A	17	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=286429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34153001_34178001_36C;SPAN=341051;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
5	34171242	286429:2	A	A[5:33830191[	17	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=286429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34153001_34178001_36C;SPAN=341051;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
5	34304693	286531:1	T	T[5:34307800[	12	PASS	DISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=ATTTTTTTT;MAPQ=60;MATEID=286531:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34300001_34325001_48C;SPAN=3107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:60:12.8:12.8,0,138.2:5:6:-12.84:18.99
5	34307800	286531:2	A	]5:34304693]A	12	PASS	DISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=ATTTTTTTT;MAPQ=60;MATEID=286531:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34300001_34325001_48C;SPAN=3107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:60:12.8:12.8,0,138.2:5:6:-12.84:18.99
5	34371504	280766:2	C	C]5:20834797]	10	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=280766:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20834797(+)-5:34371504(+)__5_20825001_20850001D;SPAN=13536707;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:57:10.4:10.4,0,132.5:0:8:-10.39:16.63
5	34371648	280763:2	G	[5:20832371[G	17	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=280763:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20832371(-)-5:34371648(-)__5_20825001_20850001D;SPAN=13539277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
5	35191048	286918:1	C	C[5:35191370[	16	PASS	EVDNC=ASSMB;HOMSEQ=CAGATGTGTTATTTTC;MAPQ=60;MATEID=286918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35182001_35207001_0C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:59:16.4:16.4,0,131.9:10:0:-16.43:21.68
5	35191370	286918:2	C	]5:35191048]C	16	PASS	EVDNC=ASSMB;HOMSEQ=CAGATGTGTTATTTTC;MAPQ=60;MATEID=286918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35182001_35207001_0C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:59:16.4:16.4,0,131.9:10:0:-16.43:21.68
5	35614083	287048:1	G	G[5:35614385[	30	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATTGAGG;MAPQ=60;MATEID=287048:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35598501_35623501_58C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:12:0:-30.06:30.47
5	35614385	287048:2	A	]5:35614083]A	30	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATTGAGG;MAPQ=60;MATEID=287048:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35598501_35623501_58C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:12:0:-30.06:30.47
5	37293717	287660:1	T	T[5:37294029[	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGCAAATGATGATTCTT;MAPQ=60;MATEID=287660:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_37289001_37314001_85C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:43:12:132,12,0:41:0:-132:132
5	37294029	287660:2	T	]5:37293717]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGCAAATGATGATTCTT;MAPQ=60;MATEID=287660:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_37289001_37314001_85C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:43:12:132,12,0:41:0:-132:132
5	39787650	288543:1	A	]9:7741406]A	64	PASS	DISC_MAPQ=17;EVDNC=ASDIS;INSERTION=GAGTT;MAPQ=26;MATEID=288543:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_39763501_39788501_1C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:20:12:-67.65:67.65
5	40662832	288928:1	T	T]5:40709960]	29	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=288928:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:40662832(+)-5:40709960(+)__5_40645501_40670501D;SPAN=47128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	40709960	288928:2	A	A]5:40662832]	29	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=288928:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:40662832(+)-5:40709960(+)__5_40645501_40670501D;SPAN=47128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	40794513	288988:1	T	T[5:40794877[	85	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=288988:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_40792501_40817501_91C;SPAN=364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
5	40794877	288988:2	T	]5:40794513]T	85	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=288988:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_40792501_40817501_91C;SPAN=364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
5	41599348	289232:1	A	A[5:41600022[	29	PASS	EVDNC=ASSMB;HOMSEQ=AGAAA;MAPQ=60;MATEID=289232:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_5_41576501_41601501_158C;SPAN=674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92
5	41600022	289232:2	A	]5:41599348]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AGAAA;MAPQ=60;MATEID=289232:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_5_41576501_41601501_158C;SPAN=674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92
5	41603901	289246:1	A	A[5:41604211[	23	PASS	EVDNC=ASSMB;HOMSEQ=AACTCTGAGATGA;MAPQ=60;MATEID=289246:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_5_41601001_41626001_59C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
5	41604211	289246:2	A	]5:41603901]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AACTCTGAGATGA;MAPQ=60;MATEID=289246:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_5_41601001_41626001_59C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
5	42165839	289387:1	T	T[5:42167668[	99	PASS	EVDNC=ASSMB;HOMSEQ=TTAAAACTTTGTT;MAPQ=60;MATEID=289387:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_42164501_42189501_125C;SPAN=1829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:32:9.3:102.3,9.3,0:34:0:-102.3:102.3
5	42167668	289387:2	T	]5:42165839]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TTAAAACTTTGTT;MAPQ=60;MATEID=289387:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_42164501_42189501_125C;SPAN=1829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:32:9.3:102.3,9.3,0:34:0:-102.3:102.3
5	43063268	289697:1	G	]6:51379339]G	23	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AAAGAAAG;INSERTION=GAA;MAPQ=60;MATEID=289697:2;MATENM=0;NM=6;NUMPARTS=3;REPSEQ=AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG;SCTG=c_5_43046501_43071501_75C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:4.8:23.4,4.8,0:8:11:-23.48:23.48
5	43086248	409531:1	C	[7:80914418[C	15	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=409531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:43086248(-)-7:80914418(-)__7_80899001_80924001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:63:15.5:15.5,0,140.9:0:10:-15.3:21.37
5	43616951	290284:1	A	]5:44910547]A	37	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=290284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_44908501_44933501_7C;SPAN=1293596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:13:0:-37.47:37.47
5	44910547	290284:2	A	A[5:43616951[	37	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=290284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_44908501_44933501_7C;SPAN=1293596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:13:0:-37.47:37.47
5	46144117	290591:1	G	G[5:46145889[	99	PASS	EVDNC=ASSMB;INSERTION=GTGAAAAA;MAPQ=60;MATEID=290591:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_46133501_46158501_27C;SPAN=1772;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
5	46145889	290591:2	G	]5:46144117]G	99	PASS	EVDNC=ASSMB;INSERTION=GTGAAAAA;MAPQ=60;MATEID=290591:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_46133501_46158501_27C;SPAN=1772;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
5	46164007	290597:1	A	A[5:46164338[	94	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTAGA;MAPQ=60;MATEID=290597:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_5_46158001_46183001_87C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:39:2.3:94.7,0,2.3:32:0:-99.78:99.78
5	46164338	290597:2	A	]5:46164007]A	94	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTAGA;MAPQ=60;MATEID=290597:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_5_46158001_46183001_87C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:39:2.3:94.7,0,2.3:32:0:-99.78:99.78
5	46270554	290636:1	T	T[5:46275735[	12	PASS	EVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=290636:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46256001_46281001_34C;SPAN=5181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05
5	46275735	290636:2	T	]5:46270554]T	12	PASS	EVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=290636:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46256001_46281001_34C;SPAN=5181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05
5	46405227	290750:1	T	T[5:46410473[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCATT;MAPQ=60;MATEID=290750:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_46403001_46428001_13C;SPAN=5246;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:38:42.2:42.2,0,52.1:8:11:-42.13:42.21
5	46410473	290750:2	G	]5:46405227]G	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCATT;MAPQ=60;MATEID=290750:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_46403001_46428001_13C;SPAN=5246;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:38:42.2:42.2,0,52.1:8:11:-42.13:42.21
5	46491020	290851:1	A	]5:46539787]A	26	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=290851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46491020(-)-5:46539787(+)__5_46476501_46501501D;SPAN=48767;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
5	46539787	290851:2	T	T[5:46491020[	26	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=290851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46491020(-)-5:46539787(+)__5_46476501_46501501D;SPAN=48767;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
5	46540265	291753:1	A	]5:46649184]A	33	PASS	DISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=AAGCATTCTCAGAAACTTCTT;MAPQ=60;MATEID=291753:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46648001_46673001_470C;SPAN=108919;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:5:3:33,3,0:8:3:-33.01:33.01
5	46565779	291959:1	T	T[5:46736987[	29	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=291959:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46565779(+)-5:46736987(-)__5_46721501_46746501D;SPAN=171208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:2:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	46571621	291810:1	G	G[5:46689519[	23	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=291810:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46571621(+)-5:46689519(-)__5_46672501_46697501D;SPAN=117898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
5	46649184	291753:2	T	T[5:46540265[	33	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=AAGCATTCTCAGAAACTTCTT;MAPQ=46;MATEID=291753:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46648001_46673001_470C;SPAN=108919;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:5:3:33,3,0:8:3:-33.01:33.01
5	46658868	292044:1	A	]5:46783997]A	54	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=292044:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46658868(-)-5:46783997(+)__5_46770501_46795501D;SPAN=125129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55
5	46659126	291914:1	G	G[5:46708874[	69	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=291914:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46659126(+)-5:46708874(-)__5_46697001_46722001D;SPAN=49748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	46689519	291810:2	T	]5:46571621]T	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=291810:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46571621(+)-5:46689519(-)__5_46672501_46697501D;SPAN=117898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
5	46692541	291853:1	A	A[5:46692991[	89	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=AAACTAGACAGAAGCATTCTCAGAAACTGCTTTGTGATGTGTGCATTTAACTCACAGACTTGA;MAPQ=60;MATEID=291853:2;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_5_46672501_46697501_418C;SPAN=450;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:28:8.1:89.1,8.1,0:22:11:-89.12:89.12
5	46692991	291853:2	A	]5:46692541]A	89	PASS	DISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=AAACTAGACAGAAGCATTCTCAGAAACTGCTTTGTGATGTGTGCATTTAACTCACAGACTTGA;MAPQ=0;MATEID=291853:1;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_5_46672501_46697501_418C;SPAN=450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:28:8.1:89.1,8.1,0:22:11:-89.12:89.12
5	46708874	291914:2	T	]5:46659126]T	69	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=291914:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46659126(+)-5:46708874(-)__5_46697001_46722001D;SPAN=49748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	46736987	291959:2	A	]5:46565779]A	29	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=291959:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46565779(+)-5:46736987(-)__5_46721501_46746501D;SPAN=171208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:2:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	46783997	292044:2	A	A[5:46658868[	54	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=292044:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46658868(-)-5:46783997(+)__5_46770501_46795501D;SPAN=125129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55
5	46912885	292214:1	T	]5:47020460]T	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGACAGAAGCA;MAPQ=60;MATEID=292214:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_47015501_47040501_88C;SPAN=107575;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:21:4:-75.92:75.92
5	46926344	292248:1	C	[5:47075336[C	69	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=292248:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46926344(-)-5:47075336(-)__5_47064501_47089501D;SPAN=148992;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:3:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	47020460	292214:2	A	A[5:46912885[	75	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGACAGAAGCA;MAPQ=60;MATEID=292214:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_47015501_47040501_88C;SPAN=107575;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:21:4:-75.92:75.92
5	47075336	292248:2	C	[5:46926344[C	69	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=292248:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46926344(-)-5:47075336(-)__5_47064501_47089501D;SPAN=148992;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:3:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	47172599	847754:1	T	]19:24896904]T	41	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=847754:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:47172599(-)-19:24896904(+)__19_24892001_24917001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:54:41:41,0,93.8:0:17:-40.94:42.13
5	49623939	292697:2	G	G]1:123283955]	33	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=292697:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123283955(+)-5:49623939(+)__5_49612501_49637501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:0:11:-33.01:33.01
5	49691392	292720:1	C	]5:49693519]C	35	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=292720:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49691392(-)-5:49693519(+)__5_49686001_49711001D;SPAN=2127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63
5	49693479	292728:1	G	G[5:49702819[	20	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=292728:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49693479(+)-5:49702819(-)__5_49686001_49711001D;SPAN=9340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
5	49693519	292720:2	T	T[5:49691392[	35	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=292720:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49691392(-)-5:49693519(+)__5_49686001_49711001D;SPAN=2127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63
5	49702819	292728:2	T	]5:49693479]T	20	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=292728:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49693479(+)-5:49702819(-)__5_49686001_49711001D;SPAN=9340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
5	49723328	293173:1	C	]5:49895193]C	7	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=293173:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49723328(-)-5:49895193(+)__5_49882001_49907001D;SPAN=171865;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:68:7.4:7.4,0,162.5:0:8:-7.294:15.98
5	49770437	293175:1	G	]5:49886143]G	42	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=293175:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49770437(-)-5:49886143(+)__5_49882001_49907001D;SPAN=115706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
5	49800374	293088:1	T	T[5:49853433[	43	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=293088:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49800374(+)-5:49853433(-)__5_49833001_49858001D;SPAN=53059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:0:15:-43.8:43.8
5	49816583	293323:1	A	A[5:49957574[	33	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=293323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49816583(+)-5:49957574(-)__5_49955501_49980501D;SPAN=140991;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:0:11:-33.01:33.01
5	49853433	293088:2	A	]5:49800374]A	43	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293088:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49800374(+)-5:49853433(-)__5_49833001_49858001D;SPAN=53059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:0:15:-43.8:43.8
5	49853709	293181:1	T	T[5:49895540[	79	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293181:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49853709(+)-5:49895540(-)__5_49882001_49907001D;SPAN=41831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
5	49886143	293175:2	G	G[5:49770437[	42	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=293175:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49770437(-)-5:49886143(+)__5_49882001_49907001D;SPAN=115706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
5	49895193	293173:2	G	G[5:49723328[	7	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293173:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49723328(-)-5:49895193(+)__5_49882001_49907001D;SPAN=171865;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:68:7.4:7.4,0,162.5:0:8:-7.294:15.98
5	49895540	293181:2	G	]5:49853709]G	79	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=293181:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49853709(+)-5:49895540(-)__5_49882001_49907001D;SPAN=41831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
5	49937653	293336:1	G	G[5:49958078[	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGAAAGAAG;MAPQ=60;MATEID=293336:2;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_5_49955501_49980501_848C;SPAN=20425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:9:12.6:138.6,12.6,0:40:12:-138.6:138.6
5	49957574	293323:2	T	]5:49816583]T	33	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=293323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49816583(+)-5:49957574(-)__5_49955501_49980501D;SPAN=140991;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:0:11:-33.01:33.01
5	49958078	293336:2	T	]5:49937653]T	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGAAAGAAG;MAPQ=60;MATEID=293336:1;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_5_49955501_49980501_848C;SPAN=20425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:9:12.6:138.6,12.6,0:40:12:-138.6:138.6
5	51925610	201766:2	C	[3:166722402[C	57	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=201766:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:166722402(-)-5:51925610(-)__3_166698001_166723001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:31:17.9:57.5,0,17.9:0:20:-58.24:58.24
5	53611921	686826:1	A	A]14:20254838]	36	PASS	DISC_MAPQ=48;EVDNC=ASDIS;INSERTION=CAACTT;MAPQ=60;MATEID=686826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20237001_20262001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:7:4:-35.86:35.86
5	53826784	294974:1	G	[5:53829682[G	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAAT;MAPQ=60;MATEID=294974:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_5_53826501_53851501_3C;SPAN=2898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:28:8.4:92.4,8.4,0:25:6:-92.42:92.42
5	53826933	294975:1	G	G]5:53829655]	85	PASS	EVDNC=ASSMB;INSERTION=CTAACTGAA;MAPQ=60;MATEID=294975:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_53826501_53851501_1C;SPAN=2722;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
5	53829655	294975:2	A	A]5:53826933]	85	PASS	EVDNC=ASSMB;INSERTION=CTAACTGAA;MAPQ=60;MATEID=294975:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_53826501_53851501_1C;SPAN=2722;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
5	53829682	294974:2	T	[5:53826784[T	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAAT;MAPQ=60;MATEID=294974:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_5_53826501_53851501_3C;SPAN=2898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:28:8.4:92.4,8.4,0:25:6:-92.42:92.42
5	56133424	295612:1	G	G[5:56134520[	82	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AGTGAGCCGAGATCGTGTCATTGCACTCCAGCCTGGGTGACAGAG;MAPQ=60;MATEID=295612:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_56129501_56154501_23C;SPAN=1096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:3:7.5:82.5,7.5,0:9:21:-82.52:82.52
5	56134520	295612:2	A	]5:56133424]A	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTGAGCCGAGATCGTGTCATTGCACTCCAGCCTGGGTGACAGAG;MAPQ=60;MATEID=295612:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_56129501_56154501_23C;SPAN=1096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:3:7.5:82.5,7.5,0:9:21:-82.52:82.52
5	56152290	295608:2	A	[1:150621245[A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=295608:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:150621245(-)-5:56152290(-)__5_56129501_56154501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29
5	58027770	296201:1	G	G[5:58037951[	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296201:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:58027770(+)-5:58037951(-)__5_58016001_58041001D;SPAN=10181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:5:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	58037951	296201:2	G	]5:58027770]G	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296201:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:58027770(+)-5:58037951(-)__5_58016001_58041001D;SPAN=10181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:5:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	58384174	296299:1	C	C[5:58390275[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAACAC;MAPQ=60;MATEID=296299:2;MATENM=2;NM=11;NUMPARTS=2;SCTG=c_5_58359001_58384001_4C;SPAN=6101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:0:10.8:118.8,10.8,0:27:18:-118.8:118.8
5	58390275	296299:2	A	]5:58384174]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAACAC;MAPQ=60;MATEID=296299:1;MATENM=11;NM=2;NUMPARTS=2;SCTG=c_5_58359001_58384001_4C;SPAN=6101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:0:10.8:118.8,10.8,0:27:18:-118.8:118.8
5	59692316	409711:1	T	[7:81172709[T	59	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=409711:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692316(-)-7:81172709(-)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:12:5.4:59.4,5.4,0:0:20:-59.41:59.41
5	59692516	409712:1	G	G]7:81172281]	25	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=409712:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692516(+)-7:81172281(+)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:40:25.1:25.1,0,74.6:0:11:-25.07:26.48
5	60193637	296744:1	A	A[5:60201074[	25	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=296744:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60193637(+)-5:60201074(-)__5_60196501_60221501D;SPAN=7437;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
5	60200548	296747:1	A	]5:60201294]A	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296747:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60200548(-)-5:60201294(+)__5_60196501_60221501D;SPAN=746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
5	60201074	296744:2	T	]5:60193637]T	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296744:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60193637(+)-5:60201074(-)__5_60196501_60221501D;SPAN=7437;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
5	60201294	296747:2	A	A[5:60200548[	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296747:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60200548(-)-5:60201294(+)__5_60196501_60221501D;SPAN=746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
5	60633808	296852:1	G	]5:60761656]G	92	PASS	EVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=296852:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_60760001_60785001_10C;SPAN=127848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42
5	60706002	296834:1	G	G[5:60707838[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296834:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60706002(+)-5:60707838(-)__5_60686501_60711501D;SPAN=1836;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:13:18.9:207.9,18.9,0:0:68:-208:208
5	60707838	296834:2	C	]5:60706002]C	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296834:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60706002(+)-5:60707838(-)__5_60686501_60711501D;SPAN=1836;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:13:18.9:207.9,18.9,0:0:68:-208:208
5	60761656	296852:2	G	G[5:60633808[	92	PASS	EVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=296852:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_60760001_60785001_10C;SPAN=127848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42
5	61453878	297015:1	C	C[5:61458570[	56	PASS	EVDNC=ASSMB;INSERTION=AGTGAGG;MAPQ=60;MATEID=297015:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_61446001_61471001_20C;SPAN=4692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78
5	61458570	297015:2	C	]5:61453878]C	56	PASS	EVDNC=ASSMB;INSERTION=AGTGAGG;MAPQ=60;MATEID=297015:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_61446001_61471001_20C;SPAN=4692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78
5	62354497	297206:1	T	]5:62433917]T	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=297206:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_62426001_62451001_9C;SPAN=79420;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:16:21:-89.12:89.12
5	62433917	297206:2	G	G[5:62354497[	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=297206:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_62426001_62451001_9C;SPAN=79420;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:16:21:-89.12:89.12
5	63277564	297467:1	C	C[5:63614896[	32	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=297467:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:63277564(+)-5:63614896(-)__5_63602001_63627001D;SPAN=337332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
5	63614896	297467:2	C	]5:63277564]C	32	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=297467:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:63277564(+)-5:63614896(-)__5_63602001_63627001D;SPAN=337332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
5	65172244	297711:2	C	C]2:68687723]	26	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=297711:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:68687723(+)-5:65172244(+)__5_65170001_65195001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7
5	73537389	299585:1	T	]5:73672251]T	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=299585:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:73537389(-)-5:73672251(+)__5_73671501_73696501D;SPAN=134862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
5	73672251	299585:2	A	A[5:73537389[	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=299585:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:73537389(-)-5:73672251(+)__5_73671501_73696501D;SPAN=134862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
5	77477364	300231:1	A	A[5:77611313[	23	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=300231:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:77477364(+)-5:77611313(-)__5_77469001_77494001D;SPAN=133949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
5	77611313	300231:2	A	]5:77477364]A	23	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=300231:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:77477364(+)-5:77611313(-)__5_77469001_77494001D;SPAN=133949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
5	78814094	300539:1	T	T[5:78816047[	72	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=300539:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:78814094(+)-5:78816047(-)__5_78792001_78817001D;SPAN=1953;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	78816047	300539:2	T	]5:78814094]T	72	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=300539:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:78814094(+)-5:78816047(-)__5_78792001_78817001D;SPAN=1953;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	78980940	300584:1	T	T[5:78981250[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTCTAGTTCTT;MAPQ=60;MATEID=300584:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_5_78963501_78988501_19C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:15:9.9:108.9,9.9,0:25:15:-108.9:108.9
5	78981250	300584:2	G	]5:78980940]G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTCTAGTTCTT;MAPQ=60;MATEID=300584:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_5_78963501_78988501_19C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:15:9.9:108.9,9.9,0:25:15:-108.9:108.9
5	81712362	301309:1	A	A[5:81712619[	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATAAAGATTACA;MAPQ=60;MATEID=301309:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_81707501_81732501_9C;SPAN=257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:14:4.8:52.8,4.8,0:18:0:-52.81:52.81
5	81712619	301309:2	A	]5:81712362]A	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATAAAGATTACA;MAPQ=60;MATEID=301309:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_81707501_81732501_9C;SPAN=257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:14:4.8:52.8,4.8,0:18:0:-52.81:52.81
5	89611142	302952:1	A	]5:89618185]A	16	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=52;MATEID=302952:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_89596501_89621501_23C;SPAN=7043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:36:16.4:16.4,0,72.5:8:0:-16.29:18.4
5	89618185	302952:2	T	T[5:89611142[	16	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=52;MATEID=302952:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_89596501_89621501_23C;SPAN=7043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:36:16.4:16.4,0,72.5:8:0:-16.29:18.4
5	91204065	303333:1	A	A[5:91206278[	79	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=303333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:91204065(+)-5:91206278(-)__5_91189001_91214001D;SPAN=2213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
5	91206278	303333:2	A	]5:91204065]A	79	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=303333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:91204065(+)-5:91206278(-)__5_91189001_91214001D;SPAN=2213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
5	91278320	303358:1	C	]5:91280018]C	61	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=303358:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_8C;SPAN=1698;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:28:8.6:61.4,0,8.6:15:13:-63.69:63.69
5	91278885	303359:1	T	T[5:91279170[	82	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCTCTCTTT;MAPQ=60;MATEID=303359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_27C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:21:7.5:82.5,7.5,0:15:16:-82.52:82.52
5	91279170	303359:2	T	]5:91278885]T	82	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TCTCTCTTT;MAPQ=60;MATEID=303359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_27C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:21:7.5:82.5,7.5,0:15:16:-82.52:82.52
5	91280018	303358:2	C	C[5:91278320[	61	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=303358:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_8C;SPAN=1698;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:28:8.6:61.4,0,8.6:15:13:-63.69:63.69
5	94472477	303817:2	G	[5:11655906[G	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=303817:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_94472001_94497001_10C;SPAN=82816571;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:6:4:-24.74:24.74
5	98524537	916269:1	A	A]22:28669971]	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916269:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:98524537(+)-22:28669971(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:74:15.5:15.5,0,170.6:0:11:-15.51:23.17
5	99009529	304939:1	G	G[5:99011777[	92	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=304939:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:99009529(+)-5:99011777(-)__5_99004501_99029501D;SPAN=2248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:4:8.4:92.4,8.4,0:0:31:-92.42:92.42
5	99011777	304939:2	C	]5:99009529]C	92	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=304939:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:99009529(+)-5:99011777(-)__5_99004501_99029501D;SPAN=2248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:4:8.4:92.4,8.4,0:0:31:-92.42:92.42
5	99532345	305053:1	T	T[5:99533288[	85	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGGTGAAACCCCGTCTCTACTAAAAATACAAAAATT;MAPQ=60;MATEID=305053:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_5_99519001_99544001_64C;SPAN=943;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:9:7.8:85.8,7.8,0:15:14:-85.82:85.82
5	99533288	305053:2	T	]5:99532345]T	85	PASS	DISC_MAPQ=5;EVDNC=ASDIS;HOMSEQ=TGGTGAAACCCCGTCTCTACTAAAAATACAAAAATT;MAPQ=60;MATEID=305053:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_5_99519001_99544001_64C;SPAN=943;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:9:7.8:85.8,7.8,0:15:14:-85.82:85.82
5	103726615	305899:1	G	G[5:103726926[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGTG;MAPQ=60;MATEID=305899:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_103708501_103733501_9C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:19:8.4:92.4,8.4,0:21:11:-92.42:92.42
5	103726926	305899:2	T	]5:103726615]T	92	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TGTG;MAPQ=60;MATEID=305899:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_103708501_103733501_9C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:19:8.4:92.4,8.4,0:21:11:-92.42:92.42
5	104518587	306071:1	A	A[5:104524626[	99	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAATTATTAA;MAPQ=60;MATEID=306071:2;MATENM=9;NM=2;NUMPARTS=2;SCTG=c_5_104517001_104542001_2C;SPAN=6039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:23:11.4:125.4,11.4,0:41:0:-125.4:125.4
5	104524626	306071:2	A	]5:104518587]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAATTATTAA;MAPQ=60;MATEID=306071:1;MATENM=2;NM=9;NUMPARTS=2;SCTG=c_5_104517001_104542001_2C;SPAN=6039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:23:11.4:125.4,11.4,0:41:0:-125.4:125.4
5	104579639	306147:1	C	]5:104775023]C	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=306147:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:104579639(-)-5:104775023(+)__5_104762001_104787001D;SPAN=195384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
5	104775023	306147:2	A	A[5:104579639[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=306147:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:104579639(-)-5:104775023(+)__5_104762001_104787001D;SPAN=195384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
5	106667444	306575:1	A	]5:106673010]A	29	PASS	EVDNC=ASSMB;INSERTION=GAAAATATAAAATG;MAPQ=60;MATEID=306575:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_106673001_106698001_18C;SPAN=5566;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
5	106673010	306575:2	A	A[5:106667444[	29	PASS	EVDNC=ASSMB;INSERTION=GAAAATATAAAATG;MAPQ=60;MATEID=306575:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_106673001_106698001_18C;SPAN=5566;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
5	106989148	306679:1	C	C[5:106990742[	72	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=306679:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:106989148(+)-5:106990742(-)__5_106967001_106992001D;SPAN=1594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:5:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	106990742	306679:2	C	]5:106989148]C	72	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=306679:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:106989148(+)-5:106990742(-)__5_106967001_106992001D;SPAN=1594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:5:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	107551672	306949:1	A	]5:108008819]A	34	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=306949:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_107996001_108021001_18C;SPAN=457147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:8:9:-34.76:34.76
5	108008819	306949:2	A	A[5:107551672[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=306949:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_107996001_108021001_18C;SPAN=457147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:8:9:-34.76:34.76
5	110659597	307504:2	T	T]1:29279188]	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=307504:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29279188(+)-5:110659597(+)__5_110642001_110667001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
5	112455705	307967:1	T	]5:113062140]T	39	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=TGGAGCTAAAGATG;MAPQ=60;MATEID=307967:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_113043001_113068001_5C;SPAN=606435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:13:10:-40.18:40.18
5	112977181	307978:1	A	]5:113116101]A	32	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TCCTTCCCCGC;MAPQ=60;MATEID=307978:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_113092001_113117001_1C;SPAN=138920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:8:6:-33.83:33.83
5	113062140	307967:2	T	T[5:112455705[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGGAGCTAAAGATG;MAPQ=60;MATEID=307967:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_113043001_113068001_5C;SPAN=606435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:13:10:-40.18:40.18
5	113116101	307978:2	G	G[5:112977181[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCCTTCCCCGC;MAPQ=60;MATEID=307978:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_113092001_113117001_1C;SPAN=138920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:8:6:-33.83:33.83
5	115420818	308409:1	T	T[5:115422193[	56	PASS	EVDNC=ASSMB;HOMSEQ=CTATCTCTTGTTTTCTT;MAPQ=60;MATEID=308409:2;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_5_115419501_115444501_4C;SPAN=1375;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
5	115422193	308409:2	C	]5:115420818]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CTATCTCTTGTTTTCTT;MAPQ=60;MATEID=308409:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_5_115419501_115444501_4C;SPAN=1375;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
5	115842122	57747:2	C	C]1:214483362]	28	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=57747:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:214483362(+)-5:115842122(+)__1_214473001_214498001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
5	115903112	308531:1	T	T[5:115913380[	25	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=308531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:115903112(+)-5:115913380(-)__5_115885001_115910001D;SPAN=10268;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
5	115913380	308531:2	C	]5:115903112]C	25	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=308531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:115903112(+)-5:115913380(-)__5_115885001_115910001D;SPAN=10268;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
5	117973459	308983:1	G	]5:117973635]G	13	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=308983:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_117967501_117992501_9C;SPAN=176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
5	117973635	308983:2	C	C[5:117973459[	13	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=308983:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_117967501_117992501_9C;SPAN=176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
5	119702489	309320:1	G	G[5:119705996[	46	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=309320:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:119702489(+)-5:119705996(-)__5_119682501_119707501D;SPAN=3507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
5	119705996	309320:2	G	]5:119702489]G	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=309320:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:119702489(+)-5:119705996(-)__5_119682501_119707501D;SPAN=3507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
5	120044567	309394:1	G	G[5:120046985[	62	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=309394:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:120044567(+)-5:120046985(-)__5_120025501_120050501D;SPAN=2418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:5:5.7:62.7,5.7,0:0:21:-62.72:62.72
5	120046985	309394:2	T	]5:120044567]T	62	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=309394:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:120044567(+)-5:120046985(-)__5_120025501_120050501D;SPAN=2418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:5:5.7:62.7,5.7,0:0:21:-62.72:62.72
5	128071820	310985:1	C	C[5:128075224[	75	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=310985:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:128071820(+)-5:128075224(-)__5_128061501_128086501D;SPAN=3404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	128075224	310985:2	A	]5:128071820]A	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=310985:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:128071820(+)-5:128075224(-)__5_128061501_128086501D;SPAN=3404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	133583356	311921:1	A	A[5:133589299[	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=311921:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:133583356(+)-5:133589299(-)__5_133574001_133599001D;SPAN=5943;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:6:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	133589299	311921:2	A	]5:133583356]A	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=311921:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:133583356(+)-5:133589299(-)__5_133574001_133599001D;SPAN=5943;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:6:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	137519022	312619:1	G	G[5:137520709[	69	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=312619:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:137519022(+)-5:137520709(-)__5_137518501_137543501D;SPAN=1687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	137520709	312619:2	G	]5:137519022]G	69	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=312619:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:137519022(+)-5:137520709(-)__5_137518501_137543501D;SPAN=1687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	139452687	313069:1	N	N[5:139453686[	42	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=313069:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:139452687(+)-5:139453686(-)__5_139454001_139479001D;SPAN=999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:0:3.9:42.9,3.9,0:0:14:-42.91:42.91
5	139453686	313069:2	T	]5:139452687]T	42	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=313069:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:139452687(+)-5:139453686(-)__5_139454001_139479001D;SPAN=999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:0:3.9:42.9,3.9,0:0:14:-42.91:42.91
5	141632067	313544:1	A	]5:142199822]A	29	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=313544:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632067(-)-5:142199822(+)__5_142198001_142223001D;SPAN=567755;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	141632296	313545:1	A	A[5:142199971[	29	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=313545:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632296(+)-5:142199971(-)__5_142198001_142223001D;SPAN=567675;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	142077508	677548:1	A	A[13:81793562[	46	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=677548:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:142077508(+)-13:81793562(-)__13_81781001_81806001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
5	142199822	313544:2	T	T[5:141632067[	29	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=313544:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632067(-)-5:142199822(+)__5_142198001_142223001D;SPAN=567755;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	142199971	313545:2	A	]5:141632296]A	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=313545:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632296(+)-5:142199971(-)__5_142198001_142223001D;SPAN=567675;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	144132924	313823:1	A	]5:144135488]A	49	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=313823:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_144133501_144158501_0C;SPAN=2564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:17:0:-49.51:49.51
5	144133302	313820:1	G	G[5:144135483[	89	PASS	EVDNC=ASSMB;INSERTION=GAATAAGCTC;MAPQ=60;MATEID=313820:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_144109001_144134001_1C;SPAN=2181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:21:8.1:89.1,8.1,0:29:0:-89.12:89.12
5	144135483	313820:2	T	]5:144133302]T	89	PASS	EVDNC=ASSMB;INSERTION=GAATAAGCTC;MAPQ=60;MATEID=313820:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_144109001_144134001_1C;SPAN=2181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:21:8.1:89.1,8.1,0:29:0:-89.12:89.12
5	144135488	313823:2	G	G[5:144132924[	49	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=313823:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_144133501_144158501_0C;SPAN=2564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:17:0:-49.51:49.51
5	149173741	603835:1	G	[11:99733408[G	42	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=G;MAPQ=45;MATEID=603835:2;MATENM=13;NM=0;NUMPARTS=2;SCTG=c_11_99715001_99740001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:9:6:-42.91:42.91
5	152076983	315337:1	A	A[5:152082886[	71	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=315337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152076983(+)-5:152082886(-)__5_152071501_152096501D;SPAN=5903;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:40:28.4:71.3,0,28.4:0:25:-72.23:72.23
5	152082886	315337:2	A	]5:152076983]A	71	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=315337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152076983(+)-5:152082886(-)__5_152071501_152096501D;SPAN=5903;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:40:28.4:71.3,0,28.4:0:25:-72.23:72.23
5	152131193	315357:1	T	]5:152135135]T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGACAA;MAPQ=60;MATEID=315357:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_152120501_152145501_9C;SPAN=3942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:36:6.6:102.3,6.6,0:22:23:-102.8:102.8
5	152131457	315358:1	A	A[5:152135133[	92	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAA;MAPQ=60;MATEID=315358:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=AA;SCTG=c_5_152120501_152145501_8C;SPAN=3676;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:30:8.4:92.4,8.4,0:24:9:-92.37:92.37
5	152131577	315360:1	C	C[5:152139302[	59	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=315360:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152131577(+)-5:152139302(-)__5_152120501_152145501D;SPAN=7725;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41
5	152135133	315358:2	C	]5:152131457]C	92	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAA;MAPQ=60;MATEID=315358:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=AA;SCTG=c_5_152120501_152145501_8C;SPAN=3676;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:30:8.4:92.4,8.4,0:24:9:-92.37:92.37
5	152135135	315357:2	A	A[5:152131193[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGACAA;MAPQ=60;MATEID=315357:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_152120501_152145501_9C;SPAN=3942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:36:6.6:102.3,6.6,0:22:23:-102.8:102.8
5	152135246	315361:1	T	T[5:152139304[	59	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCT;MAPQ=60;MATEID=315361:2;MATENM=4;NM=1;NUMPARTS=3;SCTG=c_5_152120501_152145501_8C;SPAN=4058;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41
5	152139302	315360:2	G	]5:152131577]G	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=315360:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152131577(+)-5:152139302(-)__5_152120501_152145501D;SPAN=7725;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41
5	152139304	315361:2	T	]5:152135246]T	59	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCT;MAPQ=60;MATEID=315361:1;MATENM=1;NM=4;NUMPARTS=3;SCTG=c_5_152120501_152145501_8C;SPAN=4058;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41
5	155760325	316002:1	N	N[5:155761324[	49	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGCATCACCCTCTCCATCACCCTATTCATCATCCTCTCCATCATCCTCATCATCACTCTC;MAPQ=60;MATEID=316002:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_155746501_155771501_7C;SPAN=999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:3:4.5:49.5,4.5,0:7:12:-49.51:49.51
5	155761324	316002:2	N	]5:155760325]N	49	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AGCATCACCCTCTCCATCACCCTATTCATCATCCTCTCCATCATCCTCATCATCACTCTC;MAPQ=60;MATEID=316002:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_155746501_155771501_7C;SPAN=999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:3:4.5:49.5,4.5,0:7:12:-49.51:49.51
5	161161852	317139:1	T	T[5:161163317[	39	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=317139:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:161161852(+)-5:161163317(-)__5_161161001_161186001D;SPAN=1465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61
5	161163317	317139:2	T	]5:161161852]T	39	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=317139:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:161161852(+)-5:161163317(-)__5_161161001_161186001D;SPAN=1465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61
5	167374629	318555:1	T	T[5:167384020[	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=318555:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_167384001_167409001_4C;SPAN=9391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
5	167384020	318555:2	T	]5:167374629]T	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=318555:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_167384001_167409001_4C;SPAN=9391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
5	169468974	318970:2	A	]1:157699943]A	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=318970:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_169466501_169491501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
5	170833608	321444:1	G	[5:178756116[G	72	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=321444:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:170833608(-)-5:178756116(-)__5_178752001_178777001D;SPAN=7922508;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	172787216	319739:1	A	]5:172787320]A	68	PASS	EVDNC=ASSMB;HOMSEQ=AGAGACACACA;MAPQ=60;MATEID=319739:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_172774001_172799001_9C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:61:68.9:68.9,0,82.1:26:0:-68.68:68.78
5	172787320	319739:2	A	A[5:172787216[	68	PASS	EVDNC=ASSMB;HOMSEQ=AGAGACACACA;MAPQ=60;MATEID=319739:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_172774001_172799001_9C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:61:68.9:68.9,0,82.1:26:0:-68.68:68.78
5	173783944	113403:1	A	A[7:44911156[	30	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AAAGAAA;MAPQ=60;MATEID=113403:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AAAGAAAGAAAG;SCTG=c_2_136293501_136318501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:0:6.2:30.3,6.2,0:24:0:-30.37:30.37
5	176306387	832137:1	C	C]18:57714588]	82	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=832137:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:27:7:-82.52:82.52
5	176306407	832138:1	A	[18:57714342[A	99	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=832138:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_57697501_57722501_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:15:11.7:128.7,11.7,0:25:23:-128.7:128.7
5	178095245	321220:1	C	C[5:178096986[	27	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=321220:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178095245(+)-5:178096986(-)__5_178090501_178115501D;SPAN=1741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:0:12:-27.24:28.84
5	178096986	321220:2	T	]5:178095245]T	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=321220:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178095245(+)-5:178096986(-)__5_178090501_178115501D;SPAN=1741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:0:12:-27.24:28.84
5	178727280	321428:1	C	[5:178866051[C	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=321428:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178727280(-)-5:178866051(-)__5_178703001_178728001D;SPAN=138771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
5	178756116	321444:2	T	[5:170833608[T	72	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=321444:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:170833608(-)-5:178756116(-)__5_178752001_178777001D;SPAN=7922508;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	178866051	321428:2	A	[5:178727280[A	22	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=321428:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178727280(-)-5:178866051(-)__5_178703001_178728001D;SPAN=138771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
5	179299294	321578:1	C	C]9:112100475]	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=321578:2;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_5_179291001_179316001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:12:2:-42.91:42.91
5	180437137	322042:1	C	]5:180437234]C	72	PASS	EVDNC=ASSMB;HOMSEQ=CAGCCAATGGTCCAGCAGCACCAGCCCAGGGCAGCC;MAPQ=60;MATEID=322042:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_5_180418001_180443001_13C;SPAN=97;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:49:49.1:72.2,0,49.1:26:0:-72.24:72.24
5	180437234	322042:2	C	C[5:180437137[	72	PASS	EVDNC=ASSMB;HOMSEQ=CAGCCAATGGTCCAGCAGCACCAGCCCAGGGCAGCC;MAPQ=60;MATEID=322042:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_5_180418001_180443001_13C;SPAN=97;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:49:49.1:72.2,0,49.1:26:0:-72.24:72.24
6	150718	322397:2	T	T[5:15864[	99	PASS	DISC_MAPQ=5;EVDNC=TSI_L;HOMSEQ=CTT;MAPQ=60;MATEID=322397:1;MATENM=5;NM=6;NUMPARTS=3;REPSEQ=TTT;SCTG=c_6_147001_172001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:30:10.8:118.8,10.8,0:32:13:-118.8:118.8
6	666488	322633:1	A	A[6:667821[	89	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=322633:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:666488(+)-6:667821(-)__6_661501_686501D;SPAN=1333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12
6	667821	322633:2	T	]6:666488]T	89	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=322633:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:666488(+)-6:667821(-)__6_661501_686501D;SPAN=1333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12
6	773629	322688:1	T	T[6:774803[	99	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=322688:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_6_759501_784501_14C;SPAN=1174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7
6	774803	322688:2	C	]6:773629]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=322688:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_6_759501_784501_14C;SPAN=1174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7
6	857170	322747:1	C	C[6:857563[	79	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=322747:2;MATENM=4;NM=8;NUMPARTS=2;SCTG=c_6_857501_882501_13C;SPAN=393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:3:7.2:79.2,7.2,0:26:0:-79.22:79.22
6	857563	322747:2	C	]6:857170]C	79	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=322747:1;MATENM=8;NM=4;NUMPARTS=2;SCTG=c_6_857501_882501_13C;SPAN=393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:3:7.2:79.2,7.2,0:26:0:-79.22:79.22
6	994018	322842:1	T	]6:994259]T	53	PASS	EVDNC=ASSMB;HOMSEQ=TATGTATGTATGTATGTATGTATGTATGTAT;MAPQ=60;MATEID=322842:2;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_6_980001_1005001_17C;SPAN=241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:47:53:53,0,62.9:20:0:-52.81:52.88
6	994259	322842:2	T	T[6:994018[	53	PASS	EVDNC=ASSMB;HOMSEQ=TATGTATGTATGTATGTATGTATGTATGTAT;MAPQ=60;MATEID=322842:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_6_980001_1005001_17C;SPAN=241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:47:53:53,0,62.9:20:0:-52.81:52.88
6	1051554	322871:1	G	]6:1051737]G	57	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=322871:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_1029001_1054001_3C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:67:57.2:57.2,0,110:23:0:-57.09:58.06
6	1051737	322871:2	T	T[6:1051554[	57	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=322871:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_1029001_1054001_3C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:67:57.2:57.2,0,110:23:0:-57.09:58.06
6	3145215	323598:1	T	T[6:3146275[	35	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGTGCTGGTTTGGGTCGAGTGCTGGTTCGGGTTGGAGTGCTGGTTCGGGTGGAGTGCTGATTCGGGGTGGAGTGCTGGT;MAPQ=60;MATEID=323598:2;MATENM=4;NM=4;NUMPARTS=2;SCTG=c_6_3136001_3161001_57C;SPAN=1060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:2:12:-37.11:37.11
6	3146275	323598:2	G	]6:3145215]G	35	PASS	DISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=GAGTGCTGGTTTGGGTCGAGTGCTGGTTCGGGTTGGAGTGCTGGTTCGGGTGGAGTGCTGATTCGGGGTGGAGTGCTGGT;MAPQ=60;MATEID=323598:1;MATENM=4;NM=4;NUMPARTS=2;SCTG=c_6_3136001_3161001_57C;SPAN=1060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:2:12:-37.11:37.11
6	3156553	323610:1	C	C[6:3180181[	22	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=323610:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:3156553(+)-6:3180181(-)__6_3160501_3185501D;SPAN=23628;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
6	3180181	323610:2	G	]6:3156553]G	22	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=323610:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:3156553(+)-6:3180181(-)__6_3160501_3185501D;SPAN=23628;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
6	4050023	323982:1	T	T[6:4050327[	60	PASS	EVDNC=ASSMB;HOMSEQ=GGAAACAGTTGTTTTT;MAPQ=60;MATEID=323982:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_4042501_4067501_93C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:31:14.6:60.8,0,14.6:21:0:-61.93:61.93
6	4050327	323982:2	G	]6:4050023]G	60	PASS	EVDNC=ASSMB;HOMSEQ=GGAAACAGTTGTTTTT;MAPQ=60;MATEID=323982:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_4042501_4067501_93C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:31:14.6:60.8,0,14.6:21:0:-61.93:61.93
6	5037015	324390:1	T	T[6:5038953[	82	PASS	EVDNC=ASSMB;INSERTION=AAAATCTGCTTC;MAPQ=60;MATEID=324390:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_6_5022501_5047501_11C;SPAN=1938;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:16:7.5:82.5,7.5,0:27:0:-82.52:82.52
6	5038953	324390:2	A	]6:5037015]A	82	PASS	EVDNC=ASSMB;INSERTION=AAAATCTGCTTC;MAPQ=60;MATEID=324390:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_6_5022501_5047501_11C;SPAN=1938;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:16:7.5:82.5,7.5,0:27:0:-82.52:82.52
6	5179525	324454:1	T	T[6:5380194[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=324454:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5179525(+)-6:5380194(-)__6_5169501_5194501D;SPAN=200669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
6	5380194	324454:2	G	]6:5179525]G	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=324454:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5179525(+)-6:5380194(-)__6_5169501_5194501D;SPAN=200669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
6	5852479	661746:1	T	[13:21325351[T	26	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=661746:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5852479(-)-13:21325351(-)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
6	5853533	661748:1	A	A]13:21325323]	69	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=661748:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5853533(+)-13:21325323(+)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:6:6.3:69.3,6.3,0:0:23:-69.32:69.32
6	5898216	324659:1	A	A[6:5898643[	63	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=324659:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_5880001_5905001_75C;SPAN=427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:33:17.3:63.5,0,17.3:22:0:-64.61:64.61
6	5898643	324659:2	C	]6:5898216]C	63	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=324659:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_5880001_5905001_75C;SPAN=427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:33:17.3:63.5,0,17.3:22:0:-64.61:64.61
6	6008564	324826:1	C	]6:6149684]C	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=324826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6149501_6174501_31C;SPAN=141120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:7:5:-30.15:30.15
6	6068616	324764:1	T	T[6:6068946[	0	PASS	EVDNC=ASSMB;HOMSEQ=CCCTCTTTTTCT;MAPQ=60;MATEID=324764:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6051501_6076501_146C;SPAN=330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:264:27.7:0,27.7,719.5:14:0:27.99:22.92
6	6068946	324764:2	C	]6:6068616]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CCCTCTTTTTCT;MAPQ=60;MATEID=324764:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6051501_6076501_146C;SPAN=330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:264:27.7:0,27.7,719.5:14:0:27.99:22.92
6	6149684	324826:2	T	T[6:6008564[	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=324826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6149501_6174501_31C;SPAN=141120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:7:5:-30.15:30.15
6	8227706	325594:1	T	T[6:8228009[	40	PASS	EVDNC=ASSMB;HOMSEQ=TACTGTGAAGTTTTTT;MAPQ=60;MATEID=325594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_8207501_8232501_120C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
6	8228009	325594:2	T	]6:8227706]T	40	PASS	EVDNC=ASSMB;HOMSEQ=TACTGTGAAGTTTTTT;MAPQ=60;MATEID=325594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_8207501_8232501_120C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
6	9179635	326114:1	T	]6:9180042]T	31	PASS	EVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=25;MATEID=326114:2;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_6_9163001_9188001_16C;SPAN=407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1
6	9180042	326114:2	T	T[6:9179635[	31	PASS	EVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=326114:1;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_6_9163001_9188001_16C;SPAN=407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1
6	9347213	732153:1	G	G[15:55959268[	10	PASS	EVDNC=ASSMB;HOMSEQ=TTAG;MAPQ=60;MATEID=732153:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55958001_55983001_95C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:44:10.7:10.7,0,99.8:7:0:-10.74:14.97
6	9517473	326244:1	A	]6:9517558]A	50	PASS	EVDNC=ASSMB;INSERTION=TTATAT;MAPQ=60;MATEID=326244:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_9506001_9531001_35C;SPAN=85;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:89:50.9:50.9,0,173:23:0:-50.91:54.64
6	9517558	326244:2	A	A[6:9517473[	50	PASS	EVDNC=ASSMB;INSERTION=TTATAT;MAPQ=60;MATEID=326244:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_9506001_9531001_35C;SPAN=85;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:89:50.9:50.9,0,173:23:0:-50.91:54.64
6	13128170	988636:1	C	C]Un_KN707756v1_decoy:4877]	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988636:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_607_1_4877_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:11:0:-33.01:33.01
6	13128174	327574:1	C	]9:21841795]C	49	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ATCACATCACAGGACTCTTTGCAGACATCCCCCAGCATCAGCTCAGACAGAGCCTGTTGCCCTGCTGAGTGGCTAGACCCAGAAGAGCAATAACAGTCACTGCAGTCCAGGTCTCAAGAAGCCCCATCCCTAGGGGAAGGGGGAGAGCACAACATCAAGGGGTCACCCCTTGGGACAAGAAAATCTGAACAGCAGCCCTTGAGTTTCAAACTTCTC;INSERTION=ACTTCTC;MAPQ=60;MATEID=327574:2;MATENM=8;NM=0;NUMPARTS=4;REPSEQ=CTCT;SCTG=c_6_13107501_13132501_88C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:13:6:-49.51:49.51
6	13128174	988637:1	C	[Un_KN707756v1_decoy:1[C	36	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988637:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_607_1_4877_0C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:4:3.3:36.3,3.3,0:12:0:-36.31:36.31
6	13191316	812584:1	A	A[17:66641155[	40	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=812584:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:13191316(+)-17:66641155(-)__17_66640001_66665001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:0:15:-39.96:39.98
6	13434242	327696:1	C	]6:13434601]C	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGAAGTCAAGTGCAGGGCCTTATGGGAACACAGAAGTCAAGTGCAGGGC;MAPQ=60;MATEID=327696:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_13426001_13451001_3C;SPAN=359;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:56:27.2:27.2,0,113:11:2:-27.17:30.18
6	13434601	327696:2	C	C[6:13434242[	27	PASS	DISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=CACAGAAGTCAAGTGCAGGGCCTTATGGGAACACAGAAGTCAAGTGCAGGGC;MAPQ=60;MATEID=327696:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_13426001_13451001_3C;SPAN=359;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:56:27.2:27.2,0,113:11:2:-27.17:30.18
6	17099662	328908:1	A	]6:17320764]A	48	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=328908:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_17076501_17101501_22C;SPAN=221102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68
6	17320764	328908:2	A	A[6:17099662[	48	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=328908:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_17076501_17101501_22C;SPAN=221102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68
6	18401859	329492:1	C	C[6:18402637[	92	PASS	EVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=329492:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_18399501_18424501_13C;SPAN=778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:31:0:-92.42:92.42
6	18402637	329492:2	C	]6:18401859]C	92	PASS	EVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=329492:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_18399501_18424501_13C;SPAN=778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:31:0:-92.42:92.42
6	19423383	329861:1	T	T[6:19423606[	56	PASS	EVDNC=ASSMB;HOMSEQ=TGCATTGCCTTT;MAPQ=60;MATEID=329861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19404001_19429001_69C;SPAN=223;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
6	19423606	329861:2	T	]6:19423383]T	56	PASS	EVDNC=ASSMB;HOMSEQ=TGCATTGCCTTT;MAPQ=60;MATEID=329861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19404001_19429001_69C;SPAN=223;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
6	19764886	330018:1	A	[14:76216190[A	92	PASS	DISC_MAPQ=4;EVDNC=ASDIS;INSERTION=G;MAPQ=19;MATEID=330018:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_3C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:28:15:-92.42:92.42
6	19764894	330019:1	G	G[6:19770954[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAAAAACTAACTGG;MAPQ=60;MATEID=330019:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_19747001_19772001_11C;SPAN=6060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:30:887:99:0,150,2535:13:22:150.3:43.18
6	19770954	330019:2	A	]6:19764894]A	0	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AGAAAAAAAAACTAACTGG;MAPQ=60;MATEID=330019:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_11C;SPAN=6060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:30:887:99:0,150,2535:13:22:150.3:43.18
6	20765147	330418:1	T	T[6:20765456[	74	PASS	EVDNC=ASSMB;HOMSEQ=GGTTACATTCTT;MAPQ=60;MATEID=330418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_20751501_20776501_118C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:30:1.4:74,0,1.4:25:0:-78.37:78.37
6	20765456	330418:2	G	]6:20765147]G	74	PASS	EVDNC=ASSMB;HOMSEQ=GGTTACATTCTT;MAPQ=60;MATEID=330418:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_20751501_20776501_118C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:30:1.4:74,0,1.4:25:0:-78.37:78.37
6	21205807	330582:1	A	A[6:21206084[	82	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACA;MAPQ=60;MATEID=330582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21192501_21217501_51C;SPAN=277;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:23:7.5:82.5,7.5,0:22:8:-82.52:82.52
6	21206084	330582:2	G	]6:21205807]G	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACA;MAPQ=60;MATEID=330582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21192501_21217501_51C;SPAN=277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:23:7.5:82.5,7.5,0:22:8:-82.52:82.52
6	21456465	330678:2	A	A[4:183247605[	23	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTATATATACTATATATA;MAPQ=60;MATEID=330678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21437501_21462501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:7:3:-24.05:24.05
6	22052541	330896:1	C	C[6:22053499[	79	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=330896:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22050001_22075001_4C;SPAN=958;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68
6	22053499	330896:2	C	]6:22052541]C	79	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=330896:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22050001_22075001_4C;SPAN=958;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68
6	22782439	331166:1	T	T[6:22782745[	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGTTTGGCAATTATTT;MAPQ=60;MATEID=331166:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22760501_22785501_46C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:29:4.8:82.5,4.8,0:17:10:-83.85:83.85
6	22782745	331166:2	C	]6:22782439]C	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGTTTGGCAATTATTT;MAPQ=60;MATEID=331166:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22760501_22785501_46C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:29:4.8:82.5,4.8,0:17:10:-83.85:83.85
6	22832898	331189:1	A	A[6:22833431[	8	PASS	EVDNC=ASSMB;INSERTION=CGCTCTAA;MAPQ=60;MATEID=331189:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_22809501_22834501_21C;SPAN=533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73
6	22833431	331189:2	C	]6:22832898]C	8	PASS	EVDNC=ASSMB;INSERTION=CGCTCTAA;MAPQ=60;MATEID=331189:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_22809501_22834501_21C;SPAN=533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73
6	23734339	331626:1	T	]6:23758485]T	29	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=331626:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:23734339(-)-6:23758485(+)__6_23716001_23741001D;SPAN=24146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
6	23743031	331638:1	T	T[6:23745718[	62	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=331638:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_6_23740501_23765501_45C;SPAN=2687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21
6	23745718	331638:2	G	]6:23743031]G	62	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=331638:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_6_23740501_23765501_45C;SPAN=2687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21
6	23758485	331626:2	C	C[6:23734339[	29	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=331626:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:23734339(-)-6:23758485(+)__6_23716001_23741001D;SPAN=24146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
6	24811736	332224:1	A	A[6:24817721[	79	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=332224:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:24811736(+)-6:24817721(-)__6_24794001_24819001D;SPAN=5985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
6	24817721	332224:2	T	]6:24811736]T	79	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=332224:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:24811736(+)-6:24817721(-)__6_24794001_24819001D;SPAN=5985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
6	26518278	332830:1	A	A[6:26518585[	4	PASS	EVDNC=ASSMB;HOMSEQ=GTGATCCACCCGCCTCGGCCTCCCAAA;MAPQ=60;MATEID=332830:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_26509001_26534001_11C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:30:4.7:4.7,0,70.7:4:0:-4.771:8.22
6	26518585	332830:2	G	]6:26518278]G	4	PASS	EVDNC=ASSMB;HOMSEQ=GTGATCCACCCGCCTCGGCCTCCCAAA;MAPQ=60;MATEID=332830:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_26509001_26534001_11C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:30:4.7:4.7,0,70.7:4:0:-4.771:8.22
6	29717817	333640:1	T	T[6:29720303[	0	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=333640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29717817(+)-6:29720303(-)__6_29718501_29743501D;SPAN=2486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:35:473:17.1:0,17.1,1225:0:35:17.42:62.5
6	29720303	333640:2	A	]6:29717817]A	0	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=333640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29717817(+)-6:29720303(-)__6_29718501_29743501D;SPAN=2486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:35:473:17.1:0,17.1,1225:0:35:17.42:62.5
6	29932114	333714:1	G	G[6:29933749[	99	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=333714:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29932114(+)-6:29933749(-)__6_29914501_29939501D;SPAN=1635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:7:11.4:125.4,11.4,0:0:41:-125.4:125.4
6	29933749	333714:2	A	]6:29932114]A	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=333714:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29932114(+)-6:29933749(-)__6_29914501_29939501D;SPAN=1635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:7:11.4:125.4,11.4,0:0:41:-125.4:125.4
6	31225585	334297:1	A	A[6:31226615[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=334297:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31225585(+)-6:31226615(-)__6_31213001_31238001D;SPAN=1030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
6	31226615	334297:2	T	]6:31225585]T	26	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=334297:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31225585(+)-6:31226615(-)__6_31213001_31238001D;SPAN=1030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
6	31243972	334323:1	C	C[6:31245339[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=334323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31243972(+)-6:31245339(-)__6_31237501_31262501D;SPAN=1367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:23:12.6:138.6,12.6,0:0:45:-138.6:138.6
6	31245339	334323:2	A	]6:31243972]A	99	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=334323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31243972(+)-6:31245339(-)__6_31237501_31262501D;SPAN=1367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:23:12.6:138.6,12.6,0:0:45:-138.6:138.6
6	31453847	334588:1	A	A[6:31456609[	54	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=334588:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31453847(+)-6:31456609(-)__6_31433501_31458501D;SPAN=2762;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55
6	31456609	334588:2	C	]6:31453847]C	54	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=334588:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31453847(+)-6:31456609(-)__6_31433501_31458501D;SPAN=2762;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55
6	31703416	334708:1	G	G[6:31706584[	24	PASS	EVDNC=ASSMB;INSERTION=ACATTTTC;MAPQ=60;MATEID=334708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_31703001_31728001_0C;SPAN=3168;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
6	31706584	334708:2	A	]6:31703416]A	24	PASS	EVDNC=ASSMB;INSERTION=ACATTTTC;MAPQ=60;MATEID=334708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_31703001_31728001_0C;SPAN=3168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
6	32320801	585625:1	A	A[11:40904857[	39	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=585625:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40890501_40915501_5C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
6	32594296	335097:1	A	A[6:32596831[	28	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=335097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:32594296(+)-6:32596831(-)__6_32585001_32610001D;SPAN=2535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:17:11.9:28.4,0,11.9:0:10:-28.47:28.47
6	32596831	335097:2	T	]6:32594296]T	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=335097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:32594296(+)-6:32596831(-)__6_32585001_32610001D;SPAN=2535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:17:11.9:28.4,0,11.9:0:10:-28.47:28.47
6	33062526	4064:2	C	]1:13299454]C	46	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=4064:1;MATENM=1;NM=11;NUMPARTS=3;REPSEQ=GG;SCTG=c_1_13279001_13304001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:13:5:-46.21:46.21
6	33615534	335682:1	C	C[6:33618067[	62	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=335682:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:33615534(+)-6:33618067(-)__6_33614001_33639001D;SPAN=2533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72
6	33618067	335682:2	C	]6:33615534]C	62	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=335682:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:33615534(+)-6:33618067(-)__6_33614001_33639001D;SPAN=2533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72
6	33970052	335774:1	A	A[6:33974921[	25	PASS	EVDNC=ASSMB;INSERTION=GCTTTTAT;MAPQ=60;MATEID=335774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_33957001_33982001_67C;SPAN=4869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46
6	33974921	335774:2	A	]6:33970052]A	25	PASS	EVDNC=ASSMB;INSERTION=GCTTTTAT;MAPQ=60;MATEID=335774:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_33957001_33982001_67C;SPAN=4869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46
6	34072502	335835:1	A	]6:34073328]A	45	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=335835:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34072502(-)-6:34073328(+)__6_34055001_34080001D;SPAN=826;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:51:45.2:45.2,0,81.5:0:18:-45.08:45.71
6	34073328	335835:2	C	C[6:34072502[	45	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=335835:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34072502(-)-6:34073328(+)__6_34055001_34080001D;SPAN=826;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:51:45.2:45.2,0,81.5:0:18:-45.08:45.71
6	34375168	336028:1	C	]6:34536382]C	42	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=C;MAPQ=5;MATEID=336028:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_34520501_34545501_48C;SPAN=161214;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:8:8:-42.91:42.91
6	34536382	336028:2	C	C[6:34375168[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=336028:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_34520501_34545501_48C;SPAN=161214;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:8:8:-42.91:42.91
6	34829944	336095:1	A	]6:34915313]A	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=336095:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34829944(-)-6:34915313(+)__6_34912501_34937501D;SPAN=85369;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57
6	34915313	336095:2	C	C[6:34829944[	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=336095:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34829944(-)-6:34915313(+)__6_34912501_34937501D;SPAN=85369;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57
6	35658747	336247:1	T	T[6:35661967[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=336247:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:35658747(+)-6:35661967(-)__6_35647501_35672501D;SPAN=3220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:10:9.6:105.6,9.6,0:0:35:-105.6:105.6
6	35661967	336247:2	G	]6:35658747]G	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=336247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:35658747(+)-6:35661967(-)__6_35647501_35672501D;SPAN=3220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:10:9.6:105.6,9.6,0:0:35:-105.6:105.6
6	35915816	255192:2	C	C]4:133589882]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=255192:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:133589882(+)-6:35915816(+)__4_133574001_133599001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
6	39096799	337395:1	A	A[6:39097098[	69	PASS	EVDNC=ASSMB;INSERTION=TTGTTGTTG;MAPQ=60;MATEID=337395:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_39077501_39102501_40C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
6	39097098	337395:2	A	]6:39096799]A	69	PASS	EVDNC=ASSMB;INSERTION=TTGTTGTTG;MAPQ=60;MATEID=337395:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_39077501_39102501_40C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
6	41219155	337856:1	T	]6:41219297]T	61	PASS	EVDNC=ASSMB;HOMSEQ=TGCGTATATACGAAATGTACATATATGTGCGTATATA;MAPQ=60;MATEID=337856:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_6_41209001_41234001_28C;SPAN=142;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:99:61.4:61.4,0,186.8:27:0:-61.3:64.89
6	41219297	337856:2	A	A[6:41219155[	61	PASS	EVDNC=ASSMB;HOMSEQ=TGCGTATATACGAAATGTACATATATGTGCGTATATA;MAPQ=60;MATEID=337856:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_6_41209001_41234001_28C;SPAN=142;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:99:61.4:61.4,0,186.8:27:0:-61.3:64.89
6	41436338	337911:1	T	T[6:41436646[	40	PASS	EVDNC=ASSMB;HOMSEQ=TATGCTTGAAATTTCT;MAPQ=60;MATEID=337911:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_41429501_41454501_18C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65
6	41436646	337911:2	T	]6:41436338]T	40	PASS	EVDNC=ASSMB;HOMSEQ=TATGCTTGAAATTTCT;MAPQ=60;MATEID=337911:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_41429501_41454501_18C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65
6	41897072	338045:1	T	T[6:41897594[	52	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAAGCTGAGGCAGGAGAAT;MAPQ=60;MATEID=338045:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_41895001_41920001_15C;SPAN=522;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:12:11:-52.81:52.81
6	41897594	338045:2	C	]6:41897072]C	52	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAAGCTGAGGCAGGAGAAT;MAPQ=60;MATEID=338045:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_41895001_41920001_15C;SPAN=522;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:12:11:-52.81:52.81
6	44044615	338787:1	T	]6:44045375]T	31	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=338787:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:44044615(-)-6:44045375(+)__6_44026501_44051501D;SPAN=760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:137:31.1:31.1,0,311.6:0:21:-30.81:44.53
6	44045375	338787:2	A	A[6:44044615[	31	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=338787:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:44044615(-)-6:44045375(+)__6_44026501_44051501D;SPAN=760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:137:31.1:31.1,0,311.6:0:21:-30.81:44.53
6	47167028	339768:1	T	T[6:47167380[	20	PASS	EVDNC=ASSMB;INSERTION=TTTA;MAPQ=60;MATEID=339768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_47162501_47187501_44C;SPAN=352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
6	47167380	339768:2	T	]6:47167028]T	20	PASS	EVDNC=ASSMB;INSERTION=TTTA;MAPQ=60;MATEID=339768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_47162501_47187501_44C;SPAN=352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
6	48963309	340391:1	C	C[6:48970897[	31	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=340391:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_48951001_48976001_80C;SPAN=7588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
6	48970897	340391:2	C	]6:48963309]C	31	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=340391:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_48951001_48976001_80C;SPAN=7588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
6	51133723	341121:1	T	[6:51227147[T	52	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TTTGATTGCACT;MAPQ=60;MATEID=341121:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_51205001_51230001_33C;SPAN=93424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:12:7:-52.81:52.81
6	51227147	341121:2	A	[6:51133723[A	52	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=TTTGATTGCACT;MAPQ=32;MATEID=341121:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_51205001_51230001_33C;SPAN=93424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:12:7:-52.81:52.81
6	51379339	289697:2	G	G[5:43063268[	23	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=AAAGAAAG;INSERTION=GAA;MAPQ=60;MATEID=289697:1;MATENM=6;NM=0;NUMPARTS=3;REPSEQ=AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG;SCTG=c_5_43046501_43071501_75C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:4.8:23.4,4.8,0:8:11:-23.48:23.48
6	51391502	341184:1	C	C[6:51391805[	32	PASS	EVDNC=ASSMB;HOMSEQ=AAAATTAAGGTGTC;MAPQ=60;MATEID=341184:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_51376501_51401501_45C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
6	51391805	341184:2	A	]6:51391502]A	32	PASS	EVDNC=ASSMB;HOMSEQ=AAAATTAAGGTGTC;MAPQ=60;MATEID=341184:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_51376501_51401501_45C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
6	51652566	341267:1	T	T[6:51652878[	30	PASS	EVDNC=ASSMB;HOMSEQ=TATCTCTCTTGTTTT;MAPQ=60;MATEID=341267:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_51646001_51671001_28C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:44:30.5:30.5,0,80:13:0:-30.55:31.78
6	51652878	341267:2	T	]6:51652566]T	30	PASS	EVDNC=ASSMB;HOMSEQ=TATCTCTCTTGTTTT;MAPQ=60;MATEID=341267:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_51646001_51671001_28C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:44:30.5:30.5,0,80:13:0:-30.55:31.78
6	52786107	341621:1	C	]6:52826679]C	39	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=341621:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786107(-)-6:52826679(+)__6_52822001_52847001D;SPAN=40572;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61
6	52786421	341602:1	A	A[6:52787846[	39	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=341602:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786421(+)-6:52787846(-)__6_52773001_52798001D;SPAN=1425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:35:39.8:39.8,0,46.4:0:15:-39.68:39.73
6	52787846	341602:2	A	]6:52786421]A	39	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=341602:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786421(+)-6:52787846(-)__6_52773001_52798001D;SPAN=1425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:35:39.8:39.8,0,46.4:0:15:-39.68:39.73
6	52787876	341603:1	A	]6:52826658]A	99	PASS	DISC_MAPQ=32;EVDNC=TSI_L;INSERTION=CAGTTGTATGTCCCTTTTACCAGTCATTGGGAATTCCCAAGTCTGTGATCTTGCCAAACGTAAATTCGCAATAATTGTGTGTTGATTACTTGTCTAGAGAACGTAACTTTAGCATAAACACCTACCTTTCCTCTGGCAATGATCATATTCTTAGATTAAGTAAAATGACATCATGACTATTATTTCCCCTCATGAC;MAPQ=46;MATEID=341603:2;MATENM=1;NM=8;NUMPARTS=3;REPSEQ=TT;SCTG=c_6_52773001_52798001_77C;SPAN=38782;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:22:11.4:125.4,11.4,0:38:4:-125.4:125.4
6	52826658	341603:2	C	C[6:52787876[	99	PASS	DISC_MAPQ=46;EVDNC=TSI_L;INSERTION=CAGTTGTATGTCCCTTTTACCAGTCATTGGGAATTCCCAAGTCTGTGATCTTGCCAAACGTAAATTCGCAATAATTGTGTGTTGATTACTTGTCTAGAGAACGTAACTTTAGCATAAACACCTACCTTTCCTCTGGCAATGATCATATTCTTAGATTAAGTAAAATGACATCATGACTATTATTTCCCCTCATGAC;MAPQ=60;MATEID=341603:1;MATENM=8;NM=1;NUMPARTS=3;REPSEQ=TT;SCTG=c_6_52773001_52798001_77C;SPAN=38782;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:22:11.4:125.4,11.4,0:38:4:-125.4:125.4
6	52826679	341621:2	A	A[6:52786107[	39	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=341621:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786107(-)-6:52826679(+)__6_52822001_52847001D;SPAN=40572;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61
6	53345529	341823:1	T	]6:53345659]T	59	PASS	EVDNC=ASSMB;INSERTION=ATTCA;MAPQ=60;MATEID=341823:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_53336501_53361501_10C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:48:59.3:59.3,0,59.3:22:0:-59.13:59.13
6	53345659	341823:2	A	A[6:53345529[	59	PASS	EVDNC=ASSMB;INSERTION=ATTCA;MAPQ=60;MATEID=341823:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_53336501_53361501_10C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:48:59.3:59.3,0,59.3:22:0:-59.13:59.13
6	54059860	342044:1	T	]6:54063911]T	41	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=342044:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_54047001_54072001_38C;SPAN=4051;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:15:0:-41.43:41.43
6	54060007	342045:1	T	T[6:54070031[	64	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=342045:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_54047001_54072001_5C;SPAN=10024;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:42:41:64.1,0,41:23:0:-64.37:64.37
6	54063911	342044:2	T	T[6:54059860[	41	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=342044:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_54047001_54072001_38C;SPAN=4051;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:15:0:-41.43:41.43
6	54070031	342045:2	G	]6:54060007]G	64	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=342045:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_54047001_54072001_5C;SPAN=10024;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:42:41:64.1,0,41:23:0:-64.37:64.37
6	54691651	342258:1	A	A[6:54691973[	92	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAATGTCCCA;MAPQ=60;MATEID=342258:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_54684001_54709001_67C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:30:8.4:92.4,8.4,0:30:0:-92.42:92.42
6	54691973	342258:2	A	]6:54691651]A	92	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAATGTCCCA;MAPQ=60;MATEID=342258:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_54684001_54709001_67C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:30:8.4:92.4,8.4,0:30:0:-92.42:92.42
6	58433243	343345:1	G	G[6:61307772[	89	PASS	EVDNC=ASSMB;HOMSEQ=TTCAGACAAAAAGTAGAAAGAAG;MAPQ=60;MATEID=343345:2;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_6_58432501_58457501_60C;SPAN=2874529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89
6	61027338	344228:1	C	[6:61137183[C	23	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=344228:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61027338(-)-6:61137183(-)__6_61127501_61152501D;SPAN=109845;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
6	61048724	344203:1	T	[6:61096462[T	46	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=344203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61048724(-)-6:61096462(-)__6_61078501_61103501D;SPAN=47738;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:16:4.2:46.2,4.2,0:0:14:-44.69:44.69
6	61096462	344203:2	T	[6:61048724[T	46	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=344203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61048724(-)-6:61096462(-)__6_61078501_61103501D;SPAN=47738;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:16:4.2:46.2,4.2,0:0:14:-44.69:44.69
6	61137183	344228:2	C	[6:61027338[C	23	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=344228:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61027338(-)-6:61137183(-)__6_61127501_61152501D;SPAN=109845;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
6	61307772	343345:2	T	]6:58433243]T	89	PASS	EVDNC=ASSMB;HOMSEQ=TTCAGACAAAAAGTAGAAAGAAG;MAPQ=60;MATEID=343345:1;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_6_58432501_58457501_60C;SPAN=2874529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89
6	61386959	344524:1	T	]6:61388471]T	14	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=344524:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61386959(-)-6:61388471(+)__6_61372501_61397501D;SPAN=1512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
6	61388471	344524:2	T	T[6:61386959[	14	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=344524:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61386959(-)-6:61388471(+)__6_61372501_61397501D;SPAN=1512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
6	61392871	344529:1	T	T[6:61396289[	38	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTGATAGAGCAGTTTTGAAACACTCTTTTTGT;MAPQ=60;MATEID=344529:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_61372501_61397501_122C;SPAN=3418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:8:-38.69:38.69
6	61396289	344529:2	T	]6:61392871]T	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGATAGAGCAGTTTTGAAACACTCTTTTTGT;MAPQ=60;MATEID=344529:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_61372501_61397501_122C;SPAN=3418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:8:-38.69:38.69
6	61411159	344683:1	C	C[6:61420481[	20	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=344683:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61411159(+)-6:61420481(-)__6_61397001_61422001D;SPAN=9322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25
6	61420481	344683:2	G	]6:61411159]G	20	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=344683:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61411159(+)-6:61420481(-)__6_61397001_61422001D;SPAN=9322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25
6	63957118	345607:1	A	A[6:63958454[	11	PASS	EVDNC=ASSMB;HOMSEQ=TGAA;MAPQ=60;MATEID=345607:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_63945001_63970001_71C;SPAN=1336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59
6	63958454	345607:2	T	]6:63957118]T	11	PASS	EVDNC=ASSMB;HOMSEQ=TGAA;MAPQ=60;MATEID=345607:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_63945001_63970001_71C;SPAN=1336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59
6	64312984	345733:1	G	]6:64313296]G	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCA;MAPQ=60;MATEID=345733:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64312501_64337501_31C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:38:25.7:25.7,0,68.6:11:2:-25.63:26.77
6	64313296	345733:2	A	A[6:64312984[	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCA;MAPQ=60;MATEID=345733:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64312501_64337501_31C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:38:25.7:25.7,0,68.6:11:2:-25.63:26.77
6	64475269	345800:1	A	A[6:64475574[	25	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAGAAAA;MAPQ=60;MATEID=345800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64459501_64484501_10C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35
6	64475574	345800:2	G	]6:64475269]G	25	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAGAAAA;MAPQ=60;MATEID=345800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64459501_64484501_10C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35
6	65550146	346163:1	T	T[6:65552129[	30	PASS	EVDNC=ASSMB;HOMSEQ=TACTATATCTTT;MAPQ=60;MATEID=346163:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_65537501_65562501_69C;SPAN=1983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
6	65552129	346163:2	T	]6:65550146]T	30	PASS	EVDNC=ASSMB;HOMSEQ=TACTATATCTTT;MAPQ=60;MATEID=346163:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_65537501_65562501_69C;SPAN=1983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
6	65564962	346167:1	A	A[6:65565273[	90	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGTGGGTGAA;MAPQ=60;MATEID=346167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_65562001_65587001_80C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:66:74:90.5,0,74:33:0:-90.45:90.45
6	65565273	346167:2	A	]6:65564962]A	90	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGTGGGTGAA;MAPQ=60;MATEID=346167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_65562001_65587001_80C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:66:74:90.5,0,74:33:0:-90.45:90.45
6	66298837	346482:1	T	T[6:66339024[	33	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=346482:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_66321501_66346501_25C;SPAN=40187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
6	66331014	346487:1	T	T[6:66333296[	26	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=346487:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:66331014(+)-6:66333296(-)__6_66321501_66346501D;SPAN=2282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
6	66333296	346487:2	G	]6:66331014]G	26	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=346487:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:66331014(+)-6:66333296(-)__6_66321501_66346501D;SPAN=2282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
6	66339024	346482:2	C	]6:66298837]C	33	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=346482:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_66321501_66346501_25C;SPAN=40187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
6	66782594	346626:1	A	[6:66782833[A	20	PASS	DISC_MAPQ=55;EVDNC=TSI_L;HOMSEQ=TATATATAATATCATATATATACACAAAT;MAPQ=60;MATEID=346626:2;MATENM=0;NM=3;NUMPARTS=3;REPSEQ=TATATATA;SCTG=c_6_66762501_66787501_2C;SPAN=239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:8:20,0,8:13:10:-20.11:20.11
6	66782833	346626:2	T	[6:66782594[T	20	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TATATATAATATCATATATATACACAAAT;MAPQ=60;MATEID=346626:1;MATENM=3;NM=0;NUMPARTS=3;REPSEQ=TATATATA;SCTG=c_6_66762501_66787501_2C;SPAN=239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:8:20,0,8:13:10:-20.11:20.11
6	68894805	347539:1	A	]6:68897984]A	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=347539:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_68894001_68919001_76C;SPAN=3179;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:30:34.4:34.4,0,41:9:6:-34.48:34.51
6	68897984	347539:2	A	A[6:68894805[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=347539:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_68894001_68919001_76C;SPAN=3179;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:30:34.4:34.4,0,41:9:6:-34.48:34.51
6	69480862	347749:1	C	C[6:69482377[	22	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=347749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:69480862(+)-6:69482377(-)__6_69482001_69507001D;SPAN=1515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
6	69482377	347749:2	T	]6:69480862]T	22	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=347749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:69480862(+)-6:69482377(-)__6_69482001_69507001D;SPAN=1515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
6	69542531	347773:2	A	A[4:70133000[	20	PASS	EVDNC=ASSMB;HOMSEQ=ATCCCA;MAPQ=60;MATEID=347773:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_105C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82
6	69542551	347771:2	G	]4:70132919]G	29	PASS	EVDNC=ASSMB;HOMSEQ=GCT;MAPQ=60;MATEID=347771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
6	70153588	423222:1	T	]7:120983381]T	29	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=423222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:70153588(-)-7:120983381(+)__7_120981001_121006001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
6	71198460	348415:1	A	]6:71198552]A	61	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=348415:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_71197001_71222001_76C;SPAN=92;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62
6	71198552	348415:2	A	A[6:71198460[	61	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=348415:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_71197001_71222001_76C;SPAN=92;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62
6	71861739	348671:1	T	T[6:71862047[	34	PASS	EVDNC=ASSMB;HOMSEQ=TTAAGGTGTGTTTT;MAPQ=60;MATEID=348671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_71858501_71883501_62C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:12:0:-35.24:35.24
6	71862047	348671:2	T	]6:71861739]T	34	PASS	EVDNC=ASSMB;HOMSEQ=TTAAGGTGTGTTTT;MAPQ=60;MATEID=348671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_71858501_71883501_62C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:12:0:-35.24:35.24
6	73446443	349111:1	G	G[6:73446755[	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAATCG;MAPQ=60;MATEID=349111:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_73426501_73451501_5C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41
6	73446755	349111:2	A	]6:73446443]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAATCG;MAPQ=60;MATEID=349111:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_73426501_73451501_5C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41
6	73882346	349295:1	T	T[6:73892724[	62	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=349295:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_73892001_73917001_127C;SPAN=10378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72
6	73892724	349295:2	T	]6:73882346]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=349295:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_73892001_73917001_127C;SPAN=10378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72
6	74122788	349391:1	G	G[6:74123744[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=349391:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_74112501_74137501_60C;SPAN=956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:6:3:-21.35:21.36
6	74123744	349391:2	G	]6:74122788]G	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=349391:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_74112501_74137501_60C;SPAN=956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:6:3:-21.35:21.36
6	74155824	349406:1	T	T[6:74156868[	66	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=349406:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:74155824(+)-6:74156868(-)__6_74137001_74162001D;SPAN=1044;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:9:6:66,6,0:0:22:-66.02:66.02
6	74156868	349406:2	G	]6:74155824]G	66	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=349406:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:74155824(+)-6:74156868(-)__6_74137001_74162001D;SPAN=1044;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:9:6:66,6,0:0:22:-66.02:66.02
6	75321511	349695:1	T	[18:68905257[T	49	PASS	DISC_MAPQ=5;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=18;MATEID=349695:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_75313001_75338001_23C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:14:3:-49.51:49.51
6	75610907	349808:1	G	]6:75610995]G	50	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=349808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75607001_75632001_52C;SPAN=88;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98
6	75610995	349808:2	A	A[6:75610907[	50	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=349808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75607001_75632001_52C;SPAN=88;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98
6	75678281	349877:1	A	]6:75770245]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=349877:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75754001_75779001_49C;SPAN=91964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41
6	75770245	349877:2	G	G[6:75678281[	59	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=349877:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75754001_75779001_49C;SPAN=91964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41
6	76727539	350204:1	C	C[6:76749271[	20	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=TGTGTGGGAGTCTAAGTCTCTTTGTAGGTC;MAPQ=46;MATEID=350204:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_76734001_76759001_21C;SPAN=21732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:2:6:-20.82:20.82
6	76749271	350204:2	T	]6:76727539]T	20	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TGTGTGGGAGTCTAAGTCTCTTTGTAGGTC;MAPQ=46;MATEID=350204:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_76734001_76759001_21C;SPAN=21732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:2:6:-20.82:20.82
6	77210403	350343:1	T	T[6:77210694[	62	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGCTACTGATTTTTGT;MAPQ=60;MATEID=350343:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_77199501_77224501_75C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:19:5.7:62.7,5.7,0:21:0:-62.72:62.72
6	77210694	350343:2	A	]6:77210403]A	62	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGCTACTGATTTTTGT;MAPQ=60;MATEID=350343:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_77199501_77224501_75C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:19:5.7:62.7,5.7,0:21:0:-62.72:62.72
6	77939704	350614:2	T	[3:110032910[T	47	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=350614:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_77934501_77959501_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:8:9:-49.48:49.48
6	78257477	350715:1	T	T[6:78326759[	46	PASS	EVDNC=ASSMB;INSERTION=GTCACCCAGTCTGGAGTGCTGT;MAPQ=60;MATEID=350715:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_78326501_78351501_1C;SPAN=69282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:16:0:-46.21:46.21
6	78326759	350715:2	G	]6:78257477]G	46	PASS	EVDNC=ASSMB;INSERTION=GTCACCCAGTCTGGAGTGCTGT;MAPQ=60;MATEID=350715:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_78326501_78351501_1C;SPAN=69282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:16:0:-46.21:46.21
6	79361711	350977:1	A	A[6:79363612[	36	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=350977:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361711(+)-6:79363612(-)__6_79355501_79380501D;SPAN=1901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:34:36.8:36.8,0,46.7:0:14:-36.66:36.75
6	79361925	350980:1	G	]6:79363969]G	46	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=350980:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361925(-)-6:79363969(+)__6_79355501_79380501D;SPAN=2044;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
6	79363612	350977:2	T	]6:79361711]T	36	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=350977:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361711(+)-6:79363612(-)__6_79355501_79380501D;SPAN=1901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:34:36.8:36.8,0,46.7:0:14:-36.66:36.75
6	79363969	350980:2	C	C[6:79361925[	46	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=350980:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361925(-)-6:79363969(+)__6_79355501_79380501D;SPAN=2044;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
6	81434730	351633:1	A	A[6:81469346[	26	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=351633:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81434730(+)-6:81469346(-)__6_81462501_81487501D;SPAN=34616;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
6	81435065	351618:1	G	]6:81469570]G	29	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=351618:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81435065(-)-6:81469570(+)__6_81413501_81438501D;SPAN=34505;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
6	81469346	351633:2	G	]6:81434730]G	26	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=351633:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81434730(+)-6:81469346(-)__6_81462501_81487501D;SPAN=34616;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
6	81469570	351618:2	A	A[6:81435065[	29	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=351618:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81435065(-)-6:81469570(+)__6_81413501_81438501D;SPAN=34505;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
6	82966367	352039:1	A	A[6:82966669[	11	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACCACTGA;MAPQ=60;MATEID=352039:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_82957001_82982001_48C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:19:11.3:11.3,0,34.4:5:0:-11.16:11.92
6	82966669	352039:2	A	]6:82966367]A	11	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACCACTGA;MAPQ=60;MATEID=352039:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_82957001_82982001_48C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:19:11.3:11.3,0,34.4:5:0:-11.16:11.92
6	84608433	352428:1	T	T[6:84614503[	89	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATGT;MAPQ=60;MATEID=352428:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_6_84598501_84623501_36C;SPAN=6070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:29:0:-89.12:89.12
6	84614503	352428:2	A	]6:84608433]A	89	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATGT;MAPQ=60;MATEID=352428:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_6_84598501_84623501_36C;SPAN=6070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:29:0:-89.12:89.12
6	85316647	352651:1	C	C[6:85316950[	75	PASS	EVDNC=ASSMB;HOMSEQ=AAGGGTGGGTCCC;MAPQ=60;MATEID=352651:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_85309001_85334001_16C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92
6	85316950	352651:2	A	]6:85316647]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AAGGGTGGGTCCC;MAPQ=60;MATEID=352651:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_85309001_85334001_16C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92
6	85434593	352692:1	C	C[6:85434915[	43	PASS	EVDNC=ASSMB;HOMSEQ=GAAATTGCAGGCC;MAPQ=60;MATEID=352692:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_85431501_85456501_27C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
6	85434915	352692:2	G	]6:85434593]G	43	PASS	EVDNC=ASSMB;HOMSEQ=GAAATTGCAGGCC;MAPQ=60;MATEID=352692:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_85431501_85456501_27C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
6	85914115	352816:1	C	C[6:85916115[	23	PASS	EVDNC=ASSMB;INSERTION=CATGGGG;MAPQ=60;MATEID=352816:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_85897001_85922001_1C;SPAN=2000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
6	85916115	352816:2	G	]6:85914115]G	23	PASS	EVDNC=ASSMB;INSERTION=CATGGGG;MAPQ=60;MATEID=352816:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_85897001_85922001_1C;SPAN=2000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
6	85999056	352839:1	T	T[6:86005120[	46	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=352839:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:85999056(+)-6:86005120(-)__6_85995001_86020001D;SPAN=6064;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
6	86005120	352839:2	T	]6:85999056]T	46	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=352839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:85999056(+)-6:86005120(-)__6_85995001_86020001D;SPAN=6064;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
6	87514975	353351:1	A	A[6:87625111[	40	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=353351:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_87612001_87637001_4C;SPAN=110136;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
6	87603225	353460:1	G	]6:87844554]G	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=353460:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_87832501_87857501_128C;SPAN=241329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:7:3:-26.41:26.41
6	87625111	353351:2	T	]6:87514975]T	40	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=353351:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_87612001_87637001_4C;SPAN=110136;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
6	87844554	353460:2	C	C[6:87603225[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=353460:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_87832501_87857501_128C;SPAN=241329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:7:3:-26.41:26.41
6	92996975	354864:1	G	]6:93033903]G	46	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=354864:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:92996975(-)-6:93033903(+)__6_93026501_93051501D;SPAN=36928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
6	93033903	354864:2	T	T[6:92996975[	46	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=354864:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:92996975(-)-6:93033903(+)__6_93026501_93051501D;SPAN=36928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
6	94031356	355198:1	T	T]6:94031699]	46	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=355198:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94006501_94031501_12C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
6	94031356	355209:1	T	T[Un_KN707748v1_decoy:1[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GGAGTTCCAATACATCTGGCAGCAGACTTTTCAGTGGAAATCTTACAGGCCGAGAGAGTGGCATGACATATTTAAAGTGCTGAAGGAAAAAACAAAAAACAAAAAACAAAAAACTTTTATCCTAGAATGGTATATCTGGTGAAAATAACCTTCAAGAGTGAGGGAGAAATAAAGACTTTCCTATACAAACAAACTGAGGGATTTCATCAATACTAGACCTGTCTTACACAAATGGTCAAGGGTACTCTGCAATCTGAAGGAAAAAGTATGTTAATGAGCAACAAAAAGTCAGCTGAAGGTACAAAATTCACTGGTAATAGCACACAGAAAAACACAGAATATTATAACAA;MAPQ=60;MATEID=355209:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_6_94031001_94056001_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:12:12.9:141.9,12.9,0:47:0:-141.9:141.9
6	94031699	355198:2	C	C]6:94031356]	46	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=355198:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94006501_94031501_12C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
6	94103373	355239:2	A	[1:53954647[A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATA;MAPQ=60;MATEID=355239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94080001_94105001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:10:12:-49.51:49.51
6	94483606	355385:1	A	A[6:94484619[	95	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=355385:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_94472001_94497001_0C;SPAN=1013;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:17:8.7:95.7,8.7,0:32:0:-95.72:95.72
6	94484619	355385:2	T	]6:94483606]T	95	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=355385:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_94472001_94497001_0C;SPAN=1013;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:17:8.7:95.7,8.7,0:32:0:-95.72:95.72
6	94949156	355480:1	T	T[6:94949479[	69	PASS	EVDNC=ASSMB;HOMSEQ=AACAACAATGT;MAPQ=60;MATEID=355480:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_94937501_94962501_19C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
6	94949479	355480:2	A	]6:94949156]A	69	PASS	EVDNC=ASSMB;HOMSEQ=AACAACAATGT;MAPQ=60;MATEID=355480:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_94937501_94962501_19C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
6	95104597	355551:1	G	]6:95122065]G	28	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=355551:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95109001_95134001_93C;SPAN=17468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
6	95122065	355551:2	A	A[6:95104597[	28	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=355551:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95109001_95134001_93C;SPAN=17468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
6	95251293	355670:1	T	T[6:95252916[	52	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=355670:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:95251293(+)-6:95252916(-)__6_95231501_95256501D;SPAN=1623;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81
6	95252916	355670:2	A	]6:95251293]A	52	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=355670:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:95251293(+)-6:95252916(-)__6_95231501_95256501D;SPAN=1623;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81
6	95303196	355697:1	T	T[6:95303500[	44	PASS	EVDNC=ASSMB;HOMSEQ=TCCCAAATCTTTTT;MAPQ=60;MATEID=355697:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95280501_95305501_59C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:19:1.4:44.3,0,1.4:15:0:-46.2:46.2
6	95303500	355697:2	T	]6:95303196]T	44	PASS	EVDNC=ASSMB;HOMSEQ=TCCCAAATCTTTTT;MAPQ=60;MATEID=355697:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95280501_95305501_59C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:19:1.4:44.3,0,1.4:15:0:-46.2:46.2
6	97039514	356253:1	T	T[6:97039732[	24	PASS	EVDNC=ASSMB;INSERTION=ACAATAG;MAPQ=60;MATEID=356253:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_6_97020001_97045001_20C;SPAN=218;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
6	97039732	356253:2	A	]6:97039514]A	24	PASS	EVDNC=ASSMB;INSERTION=ACAATAG;MAPQ=60;MATEID=356253:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_6_97020001_97045001_20C;SPAN=218;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
6	99586625	356965:1	A	A[6:99587446[	46	PASS	EVDNC=ASSMB;INSERTION=ATTGC;MAPQ=60;MATEID=356965:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_99568001_99593001_107C;SPAN=821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
6	99587446	356965:2	T	]6:99586625]T	46	PASS	EVDNC=ASSMB;INSERTION=ATTGC;MAPQ=60;MATEID=356965:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_99568001_99593001_107C;SPAN=821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
6	101046817	357372:1	C	C[6:101048733[	47	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=357372:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:101046817(+)-6:101048733(-)__6_101038001_101063001D;SPAN=1916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:0:16:-49.48:49.48
6	101048733	357372:2	G	]6:101046817]G	47	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=357372:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:101046817(+)-6:101048733(-)__6_101038001_101063001D;SPAN=1916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:0:16:-49.48:49.48
6	101065929	357378:2	G	[4:63062069[G	69	PASS	DISC_MAPQ=23;EVDNC=ASDIS;INSERTION=TACAAACTCACTGGGAGGAA;MAPQ=57;MATEID=357378:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_6_101062501_101087501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:15:6.3:69.3,6.3,0:22:3:-69.32:69.32
6	102367247	357846:1	T	T[6:102367939[	41	PASS	EVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=357846:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_102361001_102386001_92C;SPAN=692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:30:34.4:41,0,34.4:15:0:-41.11:41.11
6	102367939	357846:2	C	]6:102367247]C	41	PASS	EVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=357846:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_102361001_102386001_92C;SPAN=692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:30:34.4:41,0,34.4:15:0:-41.11:41.11
6	103289589	358187:1	T	T[6:103315015[	52	PASS	EVDNC=ASSMB;INSERTION=GCCA;MAPQ=60;MATEID=358187:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_103292001_103317001_15C;SPAN=25426;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81
6	103315015	358187:2	A	]6:103289589]A	52	PASS	EVDNC=ASSMB;INSERTION=GCCA;MAPQ=60;MATEID=358187:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_103292001_103317001_15C;SPAN=25426;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81
6	104812953	358589:1	C	C[6:104815883[	52	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=358589:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_104811001_104836001_23C;SPAN=2930;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:18:0:-52.81:52.81
6	104815883	358589:2	G	]6:104812953]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=358589:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_104811001_104836001_23C;SPAN=2930;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:18:0:-52.81:52.81
6	105050281	358669:1	G	G[6:105051158[	28	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=358669:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:105050281(+)-6:105051158(-)__6_105031501_105056501D;SPAN=877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
6	105051158	358669:2	G	]6:105050281]G	28	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=358669:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:105050281(+)-6:105051158(-)__6_105031501_105056501D;SPAN=877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
6	105456034	358766:1	T	]6:105555892]T	16	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGA;MAPQ=60;MATEID=358766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_105448001_105473001_3C;SPAN=99858;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:11:10.1:16.7,0,10.1:3:4:-16.78:16.78
6	105555892	358766:2	A	A[6:105456034[	16	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGA;MAPQ=60;MATEID=358766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_105448001_105473001_3C;SPAN=99858;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:11:10.1:16.7,0,10.1:3:4:-16.78:16.78
6	106535761	359076:1	T	T[6:106536067[	99	PASS	EVDNC=ASSMB;HOMSEQ=AGCCACTAACTTTT;MAPQ=60;MATEID=359076:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_106526001_106551001_145C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:24:10.5:115.5,10.5,0:38:0:-115.5:115.5
6	106536067	359076:2	A	]6:106535761]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AGCCACTAACTTTT;MAPQ=60;MATEID=359076:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_106526001_106551001_145C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:24:10.5:115.5,10.5,0:38:0:-115.5:115.5
6	107710138	359522:1	T	T[6:107711199[	14	PASS	EVDNC=ASSMB;INSERTION=TCCTCCCACTCACTCC;MAPQ=60;MATEID=359522:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_107702001_107727001_125C;SPAN=1061;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:19:14.6:14.6,0,31.1:6:0:-14.47:14.88
6	107711199	359522:2	A	]6:107710138]A	14	PASS	EVDNC=ASSMB;INSERTION=TCCTCCCACTCACTCC;MAPQ=60;MATEID=359522:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_107702001_107727001_125C;SPAN=1061;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:19:14.6:14.6,0,31.1:6:0:-14.47:14.88
6	111370154	360501:1	T	T[6:111435576[	22	PASS	EVDNC=ASSMB;INSERTION=AATTGCAGCACTATTC;MAPQ=60;MATEID=360501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_111426001_111451001_23C;SPAN=65422;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
6	111435576	360501:2	A	]6:111370154]A	22	PASS	EVDNC=ASSMB;INSERTION=AATTGCAGCACTATTC;MAPQ=60;MATEID=360501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_111426001_111451001_23C;SPAN=65422;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
6	113883834	361285:1	T	]6:113930762]T	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=361285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_113925001_113950001_52C;SPAN=46928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:7:6:-26.75:27.42
6	113930762	361285:2	C	C[6:113883834[	26	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=361285:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_113925001_113950001_52C;SPAN=46928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:7:6:-26.75:27.42
6	115303388	361736:1	G	G[6:115303689[	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAATATTTTTTTTGTG;MAPQ=60;MATEID=361736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_115297001_115322001_25C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:242:28:0,28,663.4:12:0:28.41:19.29
6	115303689	361736:2	A	]6:115303388]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAATATTTTTTTTGTG;MAPQ=60;MATEID=361736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_115297001_115322001_25C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:242:28:0,28,663.4:12:0:28.41:19.29
6	116429667	362079:1	G	G[6:116429970[	59	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATATGAGGAGTTG;MAPQ=60;MATEID=362079:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_116424001_116449001_4C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:14:8:-59.41:59.41
6	116429970	362079:2	A	]6:116429667]A	59	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATATGAGGAGTTG;MAPQ=60;MATEID=362079:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_116424001_116449001_4C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:14:8:-59.41:59.41
6	117477466	362360:1	A	]6:117477573]A	43	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=362360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_117477501_117502501_43C;SPAN=107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
6	117477573	362360:2	A	A[6:117477466[	43	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=362360:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_117477501_117502501_43C;SPAN=107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
6	118940826	362740:1	A	]6:118941155]A	18	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=362740:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_118923001_118948001_18C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:2:-18.47:20.76
6	118941155	362740:2	G	G[6:118940826[	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=362740:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_118923001_118948001_18C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:2:-18.47:20.76
6	120504096	363278:1	A	]6:120504276]A	43	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=363278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120491001_120516001_16C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:44:43.7:43.7,0,66.8:17:0:-43.75:44.02
6	120504276	363278:2	A	A[6:120504096[	43	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=363278:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120491001_120516001_16C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:44:43.7:43.7,0,66.8:17:0:-43.75:44.02
6	120942553	363442:1	T	T[6:120942778[	72	PASS	EVDNC=ASSMB;HOMSEQ=CAACAGTTT;MAPQ=60;MATEID=363442:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120932001_120957001_31C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:18:6.6:72.6,6.6,0:24:0:-72.62:72.62
6	120942778	363442:2	C	]6:120942553]C	72	PASS	EVDNC=ASSMB;HOMSEQ=CAACAGTTT;MAPQ=60;MATEID=363442:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120932001_120957001_31C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:18:6.6:72.6,6.6,0:24:0:-72.62:72.62
6	120998160	363470:1	T	T[6:120998471[	22	PASS	EVDNC=ASSMB;HOMSEQ=CCTTTCCCATTCTT;MAPQ=60;MATEID=363470:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120981001_121006001_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
6	120998471	363470:2	C	]6:120998160]C	22	PASS	EVDNC=ASSMB;HOMSEQ=CCTTTCCCATTCTT;MAPQ=60;MATEID=363470:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120981001_121006001_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
6	121472042	363657:1	A	]6:121472146]A	49	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=363657:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_6C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:36:39.5:49.4,0,39.5:18:0:-49.34:49.34
6	121472146	363657:2	C	C[6:121472042[	49	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=363657:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_6C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:36:39.5:49.4,0,39.5:18:0:-49.34:49.34
6	121486357	363669:1	C	C[6:121486645[	14	PASS	EVDNC=ASSMB;HOMSEQ=GATCTCGGCTCACTGCAGCCTC;MAPQ=60;MATEID=363669:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_57C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39
6	121486645	363669:2	G	]6:121486357]G	14	PASS	EVDNC=ASSMB;HOMSEQ=GATCTCGGCTCACTGCAGCCTC;MAPQ=60;MATEID=363669:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_121471001_121496001_57C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39
6	122378179	363918:1	C	]6:122587980]C	22	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=363918:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:122378179(-)-6:122587980(+)__6_122377501_122402501D;SPAN=209801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
6	122587980	363918:2	T	T[6:122378179[	22	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=363918:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:122378179(-)-6:122587980(+)__6_122377501_122402501D;SPAN=209801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
6	122850286	737285:1	G	G[15:70547227[	99	PASS	DISC_MAPQ=29;EVDNC=ASDIS;INSERTION=C;MAPQ=0;MATEID=737285:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_70535501_70560501_58C;SPAN=-1;SUBN=9;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:22:13.8:151.8,13.8,0:38:23:-151.8:151.8
6	124177144	364451:1	A	A[6:124177531[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=364451:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_124166001_124191001_48C;SPAN=387;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
6	124177531	364451:2	T	]6:124177144]T	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=364451:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_124166001_124191001_48C;SPAN=387;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
6	125861963	364956:1	G	G[6:125866159[	56	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=364956:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:125861963(+)-6:125866159(-)__6_125856501_125881501D;SPAN=4196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11
6	125866159	364956:2	G	]6:125861963]G	56	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=364956:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:125861963(+)-6:125866159(-)__6_125856501_125881501D;SPAN=4196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11
6	126917735	365070:1	G	G[6:126919915[	38	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=365070:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_126910001_126935001_16C;SPAN=2180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37
6	126919915	365070:2	G	]6:126917735]G	38	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=365070:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_126910001_126935001_16C;SPAN=2180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37
6	128054467	365326:1	A	]6:128144890]A	36	PASS	EVDNC=ASSMB;INSERTION=ATTTATAATTATAAATTATAAATTTATAATTTATAATTT;MAPQ=60;MATEID=365326:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_128135001_128160001_15C;SPAN=90423;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29
6	128144890	365326:2	T	T[6:128054467[	36	PASS	EVDNC=ASSMB;INSERTION=ATTTATAATTATAAATTATAAATTTATAATTTATAATTT;MAPQ=60;MATEID=365326:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_128135001_128160001_15C;SPAN=90423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29
6	130638263	366051:1	T	T[6:130638570[	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCCAAAACTTCTT;MAPQ=60;MATEID=366051:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_130634001_130659001_8C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:18:6:-72.62:72.62
6	130638570	366051:2	C	]6:130638263]C	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCCAAAACTTCTT;MAPQ=60;MATEID=366051:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_130634001_130659001_8C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:18:6:-72.62:72.62
6	133020695	366763:1	T	T[6:133026747[	65	PASS	EVDNC=ASSMB;HOMSEQ=AGGTGTGATGTTTT;MAPQ=60;MATEID=366763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133010501_133035501_54C;SPAN=6052;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93
6	133026747	366763:2	A	]6:133020695]A	65	PASS	EVDNC=ASSMB;HOMSEQ=AGGTGTGATGTTTT;MAPQ=60;MATEID=366763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133010501_133035501_54C;SPAN=6052;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93
6	133050362	366771:1	T	T[6:133050693[	10	PASS	EVDNC=ASSMB;HOMSEQ=GCCAATTTTTCTTT;MAPQ=60;MATEID=366771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133035001_133060001_2C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4
6	133050693	366771:2	G	]6:133050362]G	10	PASS	EVDNC=ASSMB;HOMSEQ=GCCAATTTTTCTTT;MAPQ=60;MATEID=366771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133035001_133060001_2C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4
6	133947842	366979:1	G	G[6:133948587[	37	PASS	EVDNC=ASSMB;HOMSEQ=AGAG;MAPQ=60;MATEID=366979:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_133941501_133966501_10C;SPAN=745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
6	133948587	366979:2	A	]6:133947842]A	37	PASS	EVDNC=ASSMB;HOMSEQ=AGAG;MAPQ=60;MATEID=366979:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_133941501_133966501_10C;SPAN=745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
6	135509695	367689:1	G	[6:136518755[G	36	PASS	DISC_MAPQ=45;EVDNC=ASDIS;INSERTION=TTGTGTGGTGCA;MAPQ=60;MATEID=367689:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_136514001_136539001_14C;SPAN=1009060;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:9:4:-36.29:36.29
6	136518755	367689:2	A	[6:135509695[A	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTGTGTGGTGCA;MAPQ=60;MATEID=367689:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_136514001_136539001_14C;SPAN=1009060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:9:4:-36.29:36.29
6	136992557	367825:1	T	T[6:136993050[	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=367825:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_136979501_137004501_57C;SPAN=493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:18:9.3:102.3,9.3,0:34:0:-102.3:102.3
6	136993050	367825:2	T	]6:136992557]T	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=367825:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_136979501_137004501_57C;SPAN=493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:18:9.3:102.3,9.3,0:34:0:-102.3:102.3
6	138626611	368262:1	A	A[6:138626919[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATTGTA;MAPQ=60;MATEID=368262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_138621001_138646001_87C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:11:5:-35.33:35.33
6	138626919	368262:2	A	]6:138626611]A	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATTGTA;MAPQ=60;MATEID=368262:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_138621001_138646001_87C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:11:5:-35.33:35.33
6	139281458	368489:1	T	T[6:139285973[	36	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=368489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:139281458(+)-6:139285973(-)__6_139282501_139307501D;SPAN=4515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31
6	139285973	368489:2	C	]6:139281458]C	36	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=368489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:139281458(+)-6:139285973(-)__6_139282501_139307501D;SPAN=4515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31
6	141227487	369042:1	C	C[6:141228894[	20	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=369042:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_141218001_141243001_41C;SPAN=1407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77
6	141228894	369042:2	T	]6:141227487]T	20	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=369042:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_141218001_141243001_41C;SPAN=1407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77
6	144317788	369819:1	A	]6:144336154]A	27	PASS	EVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=369819:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_144329501_144354501_32C;SPAN=18366;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
6	144336154	369819:2	C	C[6:144317788[	27	PASS	EVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=369819:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_144329501_144354501_32C;SPAN=18366;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
6	147050431	842826:1	C	[19:13737615[C	99	PASS	DISC_MAPQ=15;EVDNC=ASDIS;HOMSEQ=CCTGGCTAATTTTTGTATTTTTAGTAGAGA;INSERTION=AAGCCACCGTGTCCCGCCAGCATCCACCTGC;MAPQ=56;MATEID=842826:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_19_13720001_13745001_137C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:14:10.5:115.5,10.5,0:37:7:-115.5:115.5
6	148915835	370577:1	A	]6:148915968]A	39	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=370577:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_148911001_148936001_6C;SPAN=133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77
6	148915968	370577:2	A	A[6:148915835[	39	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=370577:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_148911001_148936001_6C;SPAN=133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77
6	151416863	371503:1	G	]6:152402215]G	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=371503:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_152390001_152415001_1C;SPAN=985352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:10:10:-38:38
6	151501557	371325:1	A	]6:151688188]A	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACTTCA;MAPQ=60;MATEID=371325:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151679501_151704501_5C;SPAN=186631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:33:30.5:30.5,0,50.3:8:9:-30.34:30.67
6	151549893	371281:1	G	]6:151588711]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=371281:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151581501_151606501_4C;SPAN=38818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:36:36.2:52.7,0,36.2:19:0:-52.72:52.72
6	151563417	371335:1	C	]6:151724279]C	66	PASS	EVDNC=ASSMB;HOMSEQ=CTCCC;MAPQ=60;MATEID=371335:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151704001_151729001_20C;SPAN=160862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:22:6:66,6,0:21:0:-66.02:66.02
6	151564431	371273:1	G	G[6:151716324[	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCAGG;MAPQ=60;MATEID=371273:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_151557001_151582001_15C;SPAN=151893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:6:7:-20.36:23
6	151588711	371281:2	C	C[6:151549893[	52	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=371281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151581501_151606501_4C;SPAN=38818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:36:36.2:52.7,0,36.2:19:0:-52.72:52.72
6	151688188	371325:2	A	A[6:151501557[	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACTTCA;MAPQ=60;MATEID=371325:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151679501_151704501_5C;SPAN=186631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:33:30.5:30.5,0,50.3:8:9:-30.34:30.67
6	151716324	371273:2	G	]6:151564431]G	20	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCAGG;MAPQ=60;MATEID=371273:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_151557001_151582001_15C;SPAN=151893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:6:7:-20.36:23
6	151724279	371335:2	C	C[6:151563417[	66	PASS	EVDNC=ASSMB;HOMSEQ=CTCCC;MAPQ=60;MATEID=371335:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151704001_151729001_20C;SPAN=160862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:22:6:66,6,0:21:0:-66.02:66.02
6	152402215	371503:2	G	G[6:151416863[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=371503:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_152390001_152415001_1C;SPAN=985352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:10:10:-38:38
6	153202067	371709:2	G	]3:177126512]G	69	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATC;INSERTION=T;MAPQ=60;MATEID=371709:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
6	153202080	371714:1	G	G]6:153202289]	72	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=T;MAPQ=60;MATEID=371714:2;MATENM=1;NM=8;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
6	153202289	371714:2	T	T]6:153202080]	72	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=T;MAPQ=60;MATEID=371714:1;MATENM=8;NM=1;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
6	153202309	371708:2	T	]3:177122919]T	92	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=371708:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:177122919(+)-6:153202309(-)__6_153198501_153223501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:6:8.4:92.4,8.4,0:0:31:-92.42:92.42
6	153224432	371723:1	C	]6:153230983]C	29	PASS	DISC_MAPQ=51;EVDNC=ASDIS;MAPQ=60;MATEID=371723:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_153223001_153248001_26C;SPAN=6551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:5:8:-29.57:29.57
6	153230983	371723:2	T	T[6:153224432[	29	PASS	DISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=371723:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_153223001_153248001_26C;SPAN=6551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:5:8:-29.57:29.57
6	154142158	371950:1	T	[6:154142366[T	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=371950:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:154142158(-)-6:154142366(-)__6_154129501_154154501D;SPAN=208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
6	154142366	371950:2	A	[6:154142158[A	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=371950:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:154142158(-)-6:154142366(-)__6_154129501_154154501D;SPAN=208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
6	155599677	372340:1	G	]6:155680578]G	66	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=372340:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_155673001_155698001_4C;SPAN=80901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:15:6:66,6,0:22:0:-66.02:66.02
6	155680578	372340:2	T	T[6:155599677[	66	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=372340:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_155673001_155698001_4C;SPAN=80901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:15:6:66,6,0:22:0:-66.02:66.02
6	157310372	372674:1	G	]6:157313583]G	52	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCATAGTGCCCCAGTGT;INSERTION=A;MAPQ=11;MATEID=372674:2;MATENM=2;NM=5;NUMPARTS=4;SCTG=c_6_157290001_157315001_28C;SPAN=3211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:59:52.7:52.7,0,95.6:19:2:-52.74:53.42
6	157312929	372795:1	A	]6:157313583]A	24	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATCATAGTGCCCCAGTGTTCGCTCACCTGGCCTCATCATAGTGTCCCAGATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCACAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGCCTCAGTGTGCTCTCGCCTAGCCTCATCATAGTGTCCCAGTG;INSERTION=ATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCAC;MAPQ=60;MATEID=372795:2;MATENM=1;NM=2;NUMPARTS=3;SCTG=c_6_157290001_157315001_127C;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:161:24.1:24.1,0,380.6:19:2:-24.07:42.94
6	157313583	372795:2	G	G[6:157312929[	24	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATCATAGTGCCCCAGTGTTCGCTCACCTGGCCTCATCATAGTGTCCCAGATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCACAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGCCTCAGTGTGCTCTCGCCTAGCCTCATCATAGTGTCCCAGTG;INSERTION=ATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCAC;MAPQ=60;MATEID=372795:1;MATENM=2;NM=1;NUMPARTS=3;SCTG=c_6_157290001_157315001_127C;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:161:24.1:24.1,0,380.6:19:2:-24.07:42.94
6	157313583	372674:2	G	G[6:157310372[	52	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATAGTGCCCCAGTGT;INSERTION=A;MAPQ=46;MATEID=372674:1;MATENM=5;NM=2;NUMPARTS=4;SCTG=c_6_157290001_157315001_28C;SPAN=3211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:59:52.7:52.7,0,95.6:19:2:-52.74:53.42
6	158127250	373083:1	C	C[6:158128035[	70	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATGAACATATC;MAPQ=60;MATEID=373083:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_158123001_158148001_9C;SPAN=785;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:30:4.7:70.7,0,4.7:24:0:-74.22:74.22
6	158128035	373083:2	G	]6:158127250]G	70	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATGAACATATC;MAPQ=60;MATEID=373083:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_158123001_158148001_9C;SPAN=785;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:30:4.7:70.7,0,4.7:24:0:-74.22:74.22
6	161982335	374113:1	T	T[6:161983920[	52	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=374113:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:161982335(+)-6:161983920(-)__6_161969501_161994501D;SPAN=1585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81
6	161983920	374113:2	A	]6:161982335]A	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=374113:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:161982335(+)-6:161983920(-)__6_161969501_161994501D;SPAN=1585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81
6	162219796	374192:1	A	]6:162229285]A	18	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=374192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162214501_162239501_8C;SPAN=9489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
6	162229285	374192:2	T	T[6:162219796[	18	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=374192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162214501_162239501_8C;SPAN=9489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
6	162379810	374213:1	A	A[6:162380510[	22	PASS	EVDNC=ASSMB;INSERTION=ATATGTGTGTA;MAPQ=60;MATEID=374213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162361501_162386501_24C;SPAN=700;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:8:0:-23.02:23.02
6	162380510	374213:2	T	]6:162379810]T	22	PASS	EVDNC=ASSMB;INSERTION=ATATGTGTGTA;MAPQ=60;MATEID=374213:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162361501_162386501_24C;SPAN=700;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:8:0:-23.02:23.02
6	163482678	742255:1	A	]15:86013468]A	23	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=742255:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:163482678(-)-15:86013468(+)__15_85995001_86020001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
6	167074701	375348:1	G	G[6:167076088[	39	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=375348:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167074701(+)-6:167076088(-)__6_167065501_167090501D;SPAN=1387;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:4:3.6:39.6,3.6,0:0:13:-39.61:39.61
6	167076088	375348:2	T	]6:167074701]T	39	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=375348:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167074701(+)-6:167076088(-)__6_167065501_167090501D;SPAN=1387;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:4:3.6:39.6,3.6,0:0:13:-39.61:39.61
6	167223020	375377:1	T	[6:167284198[T	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=375377:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167223020(-)-6:167284198(-)__6_167212501_167237501D;SPAN=61178;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71
6	167284198	375377:2	C	[6:167223020[C	29	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=375377:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167223020(-)-6:167284198(-)__6_167212501_167237501D;SPAN=61178;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71
6	167651416	375568:1	T	]6:167652053]T	46	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=375568:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167651416(-)-6:167652053(+)__6_167629001_167654001D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:0:14:-46.19:46.19
6	167652053	375568:2	G	G[6:167651416[	46	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=375568:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167651416(-)-6:167652053(+)__6_167629001_167654001D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:0:14:-46.19:46.19
6	168659522	375788:1	T	]6:168660106]T	20	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=375788:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:168659522(-)-6:168660106(+)__6_168658001_168683001D;SPAN=584;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
6	168660106	375788:2	G	G[6:168659522[	20	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=375788:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:168659522(-)-6:168660106(+)__6_168658001_168683001D;SPAN=584;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
6	169996908	904003:1	T	[21:38913836[T	99	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=904003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_38906001_38931001_16C;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:51:18.3:201.3,18.3,0:61:10:-201.3:201.3
6	170452835	983884:1	G	]6:170453005]G	23	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTTAGTGTGAGTGTATGTGGGAGTGAG;MAPQ=60;MATEID=983884:2;MATENM=6;NM=5;NUMPARTS=3;SCTG=c_257_171501_196501_22C;SPAN=170;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:0:2.1:23.1,2.1,0:8:0:-23.11:23.11
6	170453005	983884:2	G	G[6:170452835[	23	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTTAGTGTGAGTGTATGTGGGAGTGAG;MAPQ=60;MATEID=983884:1;MATENM=5;NM=6;NUMPARTS=3;SCTG=c_257_171501_196501_22C;SPAN=170;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:0:2.1:23.1,2.1,0:8:0:-23.11:23.11
7	237846	376498:1	G	G[7:240253[	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=ATGGTGGTGGAGGTGATGA;MAPQ=60;MATEID=376498:2;MATENM=1;NM=4;NUMPARTS=3;SCTG=c_7_220501_245501_24C;SPAN=2407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:135:99:117.2,0,222.8:36:13:-117.2:119
7	240253	376498:2	T	]7:237846]T	99	PASS	DISC_MAPQ=21;EVDNC=ASDIS;INSERTION=ATGGTGGTGGAGGTGATGA;MAPQ=54;MATEID=376498:1;MATENM=4;NM=1;NUMPARTS=3;SCTG=c_7_220501_245501_24C;SPAN=2407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:135:99:117.2,0,222.8:36:13:-117.2:119
7	357206	376618:1	G	]7:357333]G	88	PASS	EVDNC=ASSMB;MAPQ=24;MATEID=376618:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_7_343001_368001_58C;SPAN=127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:62:65.3:88.4,0,65.3:32:0:-88.34:88.34
7	357333	376618:2	G	G[7:357206[	88	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=376618:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_7_343001_368001_58C;SPAN=127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:62:65.3:88.4,0,65.3:32:0:-88.34:88.34
7	566403	376725:1	T	]7:566782]T	17	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=376725:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:566403(-)-7:566782(+)__7_563501_588501D;SPAN=379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87
7	566782	376725:2	T	T[7:566403[	17	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=376725:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:566403(-)-7:566782(+)__7_563501_588501D;SPAN=379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87
7	1517281	377054:1	G	]7:1517474]G	39	PASS	EVDNC=ASSMB;HOMSEQ=GAATC;MAPQ=60;MATEID=377054:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_1494501_1519501_29C;SPAN=193;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:15:0:-39.11:39.25
7	1517474	377054:2	C	C[7:1517281[	39	PASS	EVDNC=ASSMB;HOMSEQ=GAATC;MAPQ=60;MATEID=377054:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_1494501_1519501_29C;SPAN=193;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:15:0:-39.11:39.25
7	1876939	914635:1	C	[22:23429471[C	26	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=914635:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:1876939(-)-22:23429471(-)__22_23422001_23447001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
7	2308151	377359:1	A	]7:2414980]A	41	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=377359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_2401001_2426001_1C;SPAN=106829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:12:11:-42.12:42.12
7	2414980	377359:2	A	A[7:2308151[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=377359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_2401001_2426001_1C;SPAN=106829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:12:11:-42.12:42.12
7	4984059	378369:1	A	[7:5730535[A	17	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=378369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:4984059(-)-7:5730535(-)__7_5708501_5733501D;SPAN=746476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
7	5730535	378369:2	G	[7:4984059[G	17	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=378369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:4984059(-)-7:5730535(-)__7_5708501_5733501D;SPAN=746476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
7	5791828	378412:1	G	G[19:8473352[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCGGGAGGCTGAGGCAG;MAPQ=60;MATEID=378412:2;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_7_5782001_5807001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:10:5:-29.71:29.71
7	6923050	378752:2	G	G[3:75414274[	30	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=378752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414274(-)-7:6923050(+)__7_6909001_6934001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:0:11:-30.82:30.82
7	8152563	379134:1	C	]7:8152858]C	8	PASS	DISC_MAPQ=28;EVDNC=TSI_L;HOMSEQ=CC;MAPQ=10;MATEID=379134:2;MATENM=10;NM=2;NUMPARTS=3;REPSEQ=CACCACCACCAC;SCTG=c_7_8134001_8159001_12C;SPAN=295;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:8.5:8.5,0,18.2:7:6:-8.054:8.563
7	8152858	379134:2	C	C[7:8152563[	8	PASS	DISC_MAPQ=36;EVDNC=TSI_L;HOMSEQ=CC;MAPQ=18;MATEID=379134:1;MATENM=2;NM=10;NUMPARTS=3;REPSEQ=CACCACCACCAC;SCTG=c_7_8134001_8159001_12C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:8.5:8.5,0,18.2:7:6:-8.054:8.563
7	9051328	379360:1	A	]Un_KN707939v1_decoy:5600]A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=379360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_9040501_9065501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3
7	9595130	379530:1	T	T[7:9596347[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=379530:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:9595130(+)-7:9596347(-)__7_9579501_9604501D;SPAN=1217;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5
7	9596347	379530:2	A	]7:9595130]A	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=379530:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:9595130(+)-7:9596347(-)__7_9579501_9604501D;SPAN=1217;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5
7	14027456	380736:1	T	T[7:14027663[	17	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=380736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_14014001_14039001_10C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
7	14027663	380736:2	T	]7:14027456]T	17	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=380736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_14014001_14039001_10C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
7	14211423	380770:1	G	G[7:14212338[	89	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TGTGATATTTACTCTCATGTTTTGTGATTTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTG;MAPQ=60;MATEID=380770:2;MATENM=5;NM=21;NUMPARTS=2;SCTG=c_7_14210001_14235001_11C;SPAN=915;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:2:8.1:89.1,8.1,0:13:18:-89.12:89.12
7	14212338	380770:2	T	]7:14211423]T	89	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGTGATATTTACTCTCATGTTTTGTGATTTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTG;MAPQ=60;MATEID=380770:1;MATENM=21;NM=5;NUMPARTS=2;SCTG=c_7_14210001_14235001_11C;SPAN=915;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:2:8.1:89.1,8.1,0:13:18:-89.12:89.12
7	15184371	381082:1	G	]7:15184539]G	14	PASS	EVDNC=ASSMB;HOMSEQ=GGAAGGAAGGGAGG;MAPQ=60;MATEID=381082:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_7_15165501_15190501_14C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:20:14.3:14.3,0,34.1:6:0:-14.18:14.72
7	15184539	381082:2	G	G[7:15184371[	14	PASS	EVDNC=ASSMB;HOMSEQ=GGAAGGAAGGGAGG;MAPQ=60;MATEID=381082:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_7_15165501_15190501_14C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:20:14.3:14.3,0,34.1:6:0:-14.18:14.72
7	15423545	381167:1	T	]7:15423669]T	92	PASS	EVDNC=ASSMB;INSERTION=TAACACGGTA;MAPQ=60;MATEID=381167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_15410501_15435501_9C;SPAN=124;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:71:85.7:92.3,0,85.7:34:0:-92.29:92.29
7	15423669	381167:2	T	T[7:15423545[	92	PASS	EVDNC=ASSMB;INSERTION=TAACACGGTA;MAPQ=60;MATEID=381167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_15410501_15435501_9C;SPAN=124;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:71:85.7:92.3,0,85.7:34:0:-92.29:92.29
7	15965553	916271:1	T	T[22:28669897[	7	PASS	EVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=916271:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_80C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:103:7.4:7.4,0,251.6:11:0:-7.359:21.48
7	18905828	382078:1	T	]7:18936195]T	38	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=382078:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_18914001_18939001_10C;SPAN=30367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:29:34.7:38,0,34.7:14:0:-38.07:38.07
7	18936195	382078:2	A	A[7:18905828[	38	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=382078:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_18914001_18939001_10C;SPAN=30367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:29:34.7:38,0,34.7:14:0:-38.07:38.07
7	19494848	382261:1	C	C[7:19495294[	99	PASS	DISC_MAPQ=50;EVDNC=TSI_L;HOMSEQ=ACGTATTTACGTGTGTATACACCCAGACGTATTTACGTGTGTATACAC;INSERTION=ACACACGTATTTACATATACACATATGTGTACACACACGTACGTACACGTGCGCGCACACGTACGTACACACGTGCGCGCACACGTACGTACACACGTGCGCGTACACGTACGTACACACGTACA;MAPQ=19;MATEID=382261:2;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=CACA;SCTG=c_7_19477501_19502501_10C;SPAN=446;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:42:18.9:207.9,18.9,0:67:10:-208:208
7	19495294	382261:2	T	]7:19494848]T	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ACGTATTTACGTGTGTATACACCCAGACGTATTTACGTGTGTATACAC;INSERTION=ACACACGTATTTACATATACACATATGTGTACACACACGTACGTACACGTGCGCGCACACGTACGTACACACGTGCGCGCACACGTACGTACACACGTGCGCGTACACGTACGTACACACGTACA;MAPQ=60;MATEID=382261:1;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=CACA;SCTG=c_7_19477501_19502501_10C;SPAN=446;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:42:18.9:207.9,18.9,0:67:10:-208:208
7	20669897	771521:1	T	T[16:74811117[	26	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=771521:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:20669897(+)-16:74811117(-)__16_74798501_74823501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
7	23776047	383518:1	A	[7:23798524[A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAGCCTTTGATAAAATT;MAPQ=60;MATEID=383518:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_7_23789501_23814501_18C;SPAN=22477;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:13:12:132,12,0:39:4:-132:132
7	23776228	383519:1	G	G]7:23798402]	39	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=383519:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:23776228(+)-7:23798402(+)__7_23789501_23814501D;SPAN=22174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61
7	23798402	383519:2	A	A]7:23776228]	39	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=383519:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:23776228(+)-7:23798402(+)__7_23789501_23814501D;SPAN=22174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61
7	23798524	383518:2	A	[7:23776047[A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAGCCTTTGATAAAATT;MAPQ=60;MATEID=383518:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_7_23789501_23814501_18C;SPAN=22477;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:13:12:132,12,0:39:4:-132:132
7	24409092	8608:2	T	T[1:33050733[	99	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=8608:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_33050501_33075501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:32:10.2:112.2,10.2,0:37:0:-112.2:112.2
7	25047891	383809:1	C	C[13:60888202[	99	PASS	DISC_MAPQ=6;EVDNC=ASDIS;INSERTION=TCTC;MAPQ=16;MATEID=383809:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_25039001_25064001_16C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:24:9.6:105.6,9.6,0:27:12:-105.6:105.6
7	26097503	384069:1	C	C[7:26105875[	69	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=384069:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26097503(+)-7:26105875(-)__7_26092501_26117501D;SPAN=8372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:2:6.3:69.3,6.3,0:0:23:-69.32:69.32
7	26105875	384069:2	C	]7:26097503]C	69	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=384069:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26097503(+)-7:26105875(-)__7_26092501_26117501D;SPAN=8372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:2:6.3:69.3,6.3,0:0:23:-69.32:69.32
7	26183011	384149:1	T	]7:26242794]T	62	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=384149:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_26239501_26264501_38C;SPAN=59783;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
7	26201745	726817:1	C	[15:40561981[C	24	PASS	DISC_MAPQ=31;EVDNC=ASDIS;MAPQ=60;MATEID=726817:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_40547501_40572501_61C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:8:2:-24.37:24.37
7	26213338	384129:1	T	T]15:40561991]	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATATTTTTTTTTTAAAGAAATATAT;MAPQ=60;MATEID=384129:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_26190501_26215501_0C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:44:30.5:30.5,0,80:11:5:-30.55:31.78
7	26242794	384149:2	T	T[7:26183011[	62	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=384149:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_26239501_26264501_38C;SPAN=59783;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
7	26639999	570478:1	A	A[10:126892082[	30	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=570478:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26639999(+)-10:126892082(-)__10_126885501_126910501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
7	32186402	385665:1	C	C[11:103330539[	53	PASS	DISC_MAPQ=5;EVDNC=ASDIS;MAPQ=1;MATEID=385665:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_32168501_32193501_8C;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:9:11:-55.29:55.29
7	32350665	385711:1	T	T[7:32353499[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=385711:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:32350665(+)-7:32353499(-)__7_32340001_32365001D;SPAN=2834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:7:11.7:128.7,11.7,0:0:42:-128.7:128.7
7	32353499	385711:2	A	]7:32350665]A	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=385711:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:32350665(+)-7:32353499(-)__7_32340001_32365001D;SPAN=2834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:7:11.7:128.7,11.7,0:0:42:-128.7:128.7
7	33363934	386172:1	A	A[7:33364248[	6	PASS	EVDNC=ASSMB;HOMSEQ=TTCACTATATTTTTA;MAPQ=60;MATEID=386172:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_33344501_33369501_28C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:37:6.2:6.2,0,85.4:5:0:-6.105:10.31
7	33364248	386172:2	T	]7:33363934]T	6	PASS	EVDNC=ASSMB;HOMSEQ=TTCACTATATTTTTA;MAPQ=60;MATEID=386172:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_33344501_33369501_28C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:37:6.2:6.2,0,85.4:5:0:-6.105:10.31
7	33859244	386375:1	T	T[7:33859561[	99	PASS	EVDNC=ASSMB;HOMSEQ=TGAGCCTGGCTTTCT;MAPQ=60;MATEID=386375:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_33859001_33884001_6C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:26:10.5:115.5,10.5,0:38:0:-115.5:115.5
7	33859561	386375:2	T	]7:33859244]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TGAGCCTGGCTTTCT;MAPQ=60;MATEID=386375:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_33859001_33884001_6C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:26:10.5:115.5,10.5,0:38:0:-115.5:115.5
7	35234658	386698:1	C	C]7:35245306]	33	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=386698:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:35234658(+)-7:35245306(+)__7_35231001_35256001D;SPAN=10648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58
7	35245306	386698:2	C	C]7:35234658]	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=386698:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:35234658(+)-7:35245306(+)__7_35231001_35256001D;SPAN=10648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58
7	37773598	388655:1	A	]7:40983036]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=388655:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_40964001_40989001_13C;SPAN=3209438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
7	37817083	388106:1	T	T[7:39387613[	17	PASS	EVDNC=ASSMB;INSERTION=TTAATAATTAGGTCCACAAACTCCAGTTAAATGT;MAPQ=60;MATEID=388106:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_39371501_39396501_38C;SPAN=1570530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:7:0:-17.77:17.94
7	38468872	387827:1	C	C[7:38469188[	36	PASS	EVDNC=ASSMB;HOMSEQ=AGAACATACAGAC;MAPQ=60;MATEID=387827:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_38465001_38490001_97C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66
7	38469188	387827:2	A	]7:38468872]A	36	PASS	EVDNC=ASSMB;HOMSEQ=AGAACATACAGAC;MAPQ=60;MATEID=387827:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_38465001_38490001_97C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66
7	39387613	388106:2	G	]7:37817083]G	17	PASS	EVDNC=ASSMB;INSERTION=TTAATAATTAGGTCCACAAACTCCAGTTAAATGT;MAPQ=60;MATEID=388106:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_39371501_39396501_38C;SPAN=1570530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:7:0:-17.77:17.94
7	40415033	388518:1	A	A[7:40415766[	43	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TGG;INSERTION=ATTTACAGATAGATAACTAGTTTTGACAGTGTTTTGAATAAATACTTTTTTCTTACTAAAATAGAATTCTACA;MAPQ=60;MATEID=388518:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_7_40400501_40425501_29C;SPAN=733;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:33:37.1:43.7,0,37.1:16:0:-43.55:43.55
7	40415766	388518:2	G	]7:40415033]G	43	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TGG;INSERTION=ATTTACAGATAGATAACTAGTTTTGACAGTGTTTTGAATAAATACTTTTTTCTTACTAAAATAGAATTCTACA;MAPQ=60;MATEID=388518:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_7_40400501_40425501_29C;SPAN=733;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:33:37.1:43.7,0,37.1:16:0:-43.55:43.55
7	40983036	388655:2	C	C[7:37773598[	29	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=388655:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_40964001_40989001_13C;SPAN=3209438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
7	42565038	388997:1	T	T[7:42565366[	99	PASS	EVDNC=ASSMB;HOMSEQ=AATTATTATCTTCTT;MAPQ=60;MATEID=388997:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_42556501_42581501_7C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:34:9.3:102.3,9.3,0:33:0:-102.3:102.3
7	42565366	388997:2	A	]7:42565038]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AATTATTATCTTCTT;MAPQ=60;MATEID=388997:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_42556501_42581501_7C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:34:9.3:102.3,9.3,0:33:0:-102.3:102.3
7	43049975	25214:2	T	T]1:107258745]	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CACCACTGGGGCCCACCACTGT;MAPQ=60;MATEID=25214:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_107236501_107261501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:145:0.9:0,0.9,366.3:10:3:1.146:22.03
7	44468055	389598:1	C	[7:44691857[C	26	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=389598:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:44468055(-)-7:44691857(-)__7_44688001_44713001D;SPAN=223802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
7	44691857	389598:2	C	[7:44468055[C	26	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=389598:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:44468055(-)-7:44691857(-)__7_44688001_44713001D;SPAN=223802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
7	44911156	113403:2	A	]5:173783944]A	30	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AAAGAAA;MAPQ=60;MATEID=113403:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AAAGAAAGAAAG;SCTG=c_2_136293501_136318501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:0:6.2:30.3,6.2,0:24:0:-30.37:30.37
7	46865061	390418:2	G	]4:94597595]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GAAGCC;MAPQ=60;MATEID=390418:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_107C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:30:11.1:122.1,11.1,0:40:0:-122.1:122.1
7	46865077	390417:2	T	T[4:94597407[	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTTTTTTTTTT;MAPQ=60;MATEID=390417:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_64C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:36:0:89.1,0,0:10:25:-94.04:94.04
7	47069783	390754:1	A	]7:47591253]A	32	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=390754:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_47579001_47604001_84C;SPAN=521470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:37:32.6:32.6,0,59:13:0:-32.51:32.98
7	47591253	390754:2	C	C[7:47069783[	32	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=390754:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_47579001_47604001_84C;SPAN=521470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:37:32.6:32.6,0,59:13:0:-32.51:32.98
7	47669121	390809:1	T	]7:47669934]T	5	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTA;MAPQ=60;MATEID=390809:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_47652501_47677501_13C;SPAN=813;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:62:5.9:5.9,0,147.8:3:6:-5.679:13.85
7	47669934	390809:2	A	A[7:47669121[	5	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTA;MAPQ=60;MATEID=390809:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_47652501_47677501_13C;SPAN=813;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:62:5.9:5.9,0,147.8:3:6:-5.679:13.85
7	48511636	391301:1	T	]7:48815223]T	20	PASS	EVDNC=ASSMB;INSERTION=AAA;MAPQ=60;MATEID=391301:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_48804001_48829001_19C;SPAN=303587;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:10:0:-20.36:23
7	48699596	391280:1	T	]7:48748303]T	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGTCAGCTGTGTATG;MAPQ=60;MATEID=391280:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_48730501_48755501_13C;SPAN=48707;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:33:40.4:40.4,0,40.4:12:9:-40.24:40.24
7	48748303	391280:2	A	A[7:48699596[	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGTCAGCTGTGTATG;MAPQ=60;MATEID=391280:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_48730501_48755501_13C;SPAN=48707;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:33:40.4:40.4,0,40.4:12:9:-40.24:40.24
7	48815223	391301:2	C	C[7:48511636[	20	PASS	EVDNC=ASSMB;INSERTION=AAA;MAPQ=60;MATEID=391301:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_48804001_48829001_19C;SPAN=303587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:10:0:-20.36:23
7	49485855	404622:1	G	G[7:72934712[	47	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=404622:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:49485855(+)-7:72934712(-)__7_72912001_72937001D;SPAN=23448857;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:44:47:47,0,63.5:0:18:-47.05:47.19
7	49498884	391800:1	G	]7:49896199]G	66	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=391800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49882001_49907001_57C;SPAN=397315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:22:6:66,6,0:22:0:-66.02:66.02
7	49512479	391617:1	T	T[7:49512788[	92	PASS	EVDNC=ASSMB;HOMSEQ=TCTACTGTCT;MAPQ=60;MATEID=391617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49490001_49515001_71C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:29:8.4:92.4,8.4,0:31:0:-92.42:92.42
7	49512788	391617:2	T	]7:49512479]T	92	PASS	EVDNC=ASSMB;HOMSEQ=TCTACTGTCT;MAPQ=60;MATEID=391617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49490001_49515001_71C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:29:8.4:92.4,8.4,0:31:0:-92.42:92.42
7	49562762	391670:1	T	]7:49655378]T	27	PASS	DISC_MAPQ=30;EVDNC=ASDIS;MAPQ=60;MATEID=391670:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49539001_49564001_202C;SPAN=92616;SUBN=10;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:42:27.8:27.8,0,77.3:10:8:-27.81:29.13
7	49655378	391670:2	G	G[7:49562762[	27	PASS	DISC_MAPQ=28;EVDNC=ASDIS;MAPQ=9;MATEID=391670:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49539001_49564001_202C;SPAN=92616;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:42:27.8:27.8,0,77.3:10:8:-27.81:29.13
7	49896199	391800:2	G	G[7:49498884[	66	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=391800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49882001_49907001_57C;SPAN=397315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:22:6:66,6,0:22:0:-66.02:66.02
7	51526615	392293:1	G	G[7:51530993[	35	PASS	EVDNC=ASSMB;INSERTION=CTGCA;MAPQ=60;MATEID=392293:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_51523501_51548501_40C;SPAN=4378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:38:35.6:35.6,0,58.7:14:0:-35.53:35.88
7	51530993	392293:2	G	]7:51526615]G	35	PASS	EVDNC=ASSMB;INSERTION=CTGCA;MAPQ=60;MATEID=392293:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_51523501_51548501_40C;SPAN=4378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:38:35.6:35.6,0,58.7:14:0:-35.53:35.88
7	52635403	916274:1	A	]22:28669566]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=916274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:117:0.2:0.2,0,293.9:10:0:-0.1223:18.51
7	53199663	392924:1	T	T[7:53200024[	69	PASS	EVDNC=ASSMB;INSERTION=TTCTA;MAPQ=60;MATEID=392924:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_53189501_53214501_90C;SPAN=361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	53200024	392924:2	A	]7:53199663]A	69	PASS	EVDNC=ASSMB;INSERTION=TTCTA;MAPQ=60;MATEID=392924:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_53189501_53214501_90C;SPAN=361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	53906970	393216:1	G	]7:53908079]G	27	PASS	DISC_MAPQ=52;EVDNC=ASDIS;MAPQ=60;MATEID=393216:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_53900001_53925001_84C;SPAN=1109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:5:10:-27.24:28.84
7	53908079	393216:2	T	T[7:53906970[	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=45;MATEID=393216:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_53900001_53925001_84C;SPAN=1109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:5:10:-27.24:28.84
7	54601280	393430:1	C	C[7:54601847[	69	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=393430:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_54586001_54611001_8C;SPAN=567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	54601847	393430:2	G	]7:54601280]G	69	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=393430:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_54586001_54611001_8C;SPAN=567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	55219065	393626:1	A	A[7:55221369[	85	PASS	EVDNC=ASSMB;HOMSEQ=TGCAATGTGCTTTTA;MAPQ=60;MATEID=393626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_55198501_55223501_105C;SPAN=2304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
7	55221369	393626:2	T	]7:55219065]T	85	PASS	EVDNC=ASSMB;HOMSEQ=TGCAATGTGCTTTTA;MAPQ=60;MATEID=393626:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_55198501_55223501_105C;SPAN=2304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
7	55904079	393853:1	A	A[7:55904442[	79	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=393853:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_55884501_55909501_2C;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:9:7.2:79.2,7.2,0:14:13:-79.22:79.22
7	55904442	393853:2	A	]7:55904079]A	79	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=393853:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_55884501_55909501_2C;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:9:7.2:79.2,7.2,0:14:13:-79.22:79.22
7	56150117	393964:1	A	A[7:56152553[	72	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=393964:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:56150117(+)-7:56152553(-)__7_56129501_56154501D;SPAN=2436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:3:6.6:72.6,6.6,0:0:24:-72.62:72.62
7	56152553	393964:2	A	]7:56150117]A	72	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=393964:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:56150117(+)-7:56152553(-)__7_56129501_56154501D;SPAN=2436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:3:6.6:72.6,6.6,0:0:24:-72.62:72.62
7	57216586	394359:1	A	]7:57217236]A	5	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=394359:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57216586(-)-7:57217236(+)__7_57207501_57232501D;SPAN=650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:100:5:5,0,245.9:0:10:-4.901:19.22
7	57217236	394359:2	T	T[7:57216586[	5	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=394359:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57216586(-)-7:57217236(+)__7_57207501_57232501D;SPAN=650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:100:5:5,0,245.9:0:10:-4.901:19.22
7	57297199	394436:1	G	G[7:57297511[	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAGAGATTGGG;MAPQ=60;MATEID=394436:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57281001_57306001_145C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:10:7:-40.63:40.63
7	57297511	394436:2	A	]7:57297199]A	40	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AATAGAGATTGGG;MAPQ=60;MATEID=394436:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57281001_57306001_145C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:10:7:-40.63:40.63
7	57352716	416796:1	A	]7:100788247]A	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=416796:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57352716(-)-7:100788247(+)__7_100768501_100793501D;SPAN=43435531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42
7	57407679	394499:1	T	T[7:57408178[	40	PASS	EVDNC=ASSMB;INSERTION=GACAACTAACTACAAC;MAPQ=60;MATEID=394499:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57403501_57428501_20C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:56:40.4:40.4,0,99.8:17:0:-40.38:41.8
7	57408178	394499:2	T	]7:57407679]T	40	PASS	EVDNC=ASSMB;INSERTION=GACAACTAACTACAAC;MAPQ=60;MATEID=394499:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57403501_57428501_20C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:56:40.4:40.4,0,99.8:17:0:-40.38:41.8
7	57765386	395084:1	A	]7:57766112]A	56	PASS	DISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=AAAAAGAGTGTTTCCAACGTGCTGAATCAATATAAAGGTTTA;MAPQ=60;MATEID=395084:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_57746501_57771501_136C;SPAN=726;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:57:56.6:56.6,0,86.3:14:14:-56.6:56.95
7	57766112	395084:2	A	A[7:57765386[	56	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAAAAGAGTGTTTCCAACGTGCTGAATCAATATAAAGGTTTA;MAPQ=58;MATEID=395084:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_57746501_57771501_136C;SPAN=726;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:57:56.6:56.6,0,86.3:14:14:-56.6:56.95
7	57898025	395257:1	T	T[7:57899685[	96	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGACAGAAGAATTCTGAGAAACTTCTTTGTGAT;MAPQ=60;MATEID=395257:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_75C;SPAN=1660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:46:17:96.2,0,17:19:21:-98.83:98.83
7	57899685	395257:2	A	]7:57898025]A	96	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AGACAGAAGAATTCTGAGAAACTTCTTTGTGAT;MAPQ=60;MATEID=395257:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_57893501_57918501_75C;SPAN=1660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:46:17:96.2,0,17:19:21:-98.83:98.83
7	57906103	395274:1	T	T[7:57915470[	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGTTTTTATGTGAAGATATT;MAPQ=60;MATEID=395274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_192C;SPAN=9367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:43:50.6:57.2,0,50.6:16:8:-57.25:57.25
7	57915470	395274:2	T	]7:57906103]T	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGTTTTTATGTGAAGATATT;MAPQ=60;MATEID=395274:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_192C;SPAN=9367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:43:50.6:57.2,0,50.6:16:8:-57.25:57.25
7	58048127	395755:1	A	[16:36178073[A	19	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=395755:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58048127(-)-16:36178073(-)__7_58040501_58065501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
7	58174911	396363:1	T	]7:60121773]T	23	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=396363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58174911(-)-7:60121773(+)__7_60098501_60123501D;SPAN=1946862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
7	58175578	396150:1	G	]7:58189271]G	42	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=396150:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175578(-)-7:58189271(+)__7_58187501_58212501D;SPAN=13693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	58175826	397693:1	G	G[7:61967061[	56	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=397693:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175826(+)-7:61967061(-)__7_61960501_61985501D;SPAN=3791235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:2:5.1:56.1,5.1,0:0:19:-56.11:56.11
7	58188890	396165:1	A	]7:61964170]A	92	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=396165:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58188890(-)-7:61964170(+)__7_58187501_58212501D;SPAN=3775280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:4:8.4:92.4,8.4,0:0:30:-92.42:92.42
7	58189271	396150:2	A	A[7:58175578[	42	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=396150:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175578(-)-7:58189271(+)__7_58187501_58212501D;SPAN=13693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	58189293	396166:1	T	T[7:61967062[	42	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=396166:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58189293(+)-7:61967062(-)__7_58187501_58212501D;SPAN=3777769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	58342553	396226:1	T	]7:58796722]T	29	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=396226:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342553(-)-7:58796722(+)__7_58775501_58800501D;SPAN=454169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
7	58342809	396402:1	A	A[7:60480878[	22	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=396402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342809(+)-7:60480878(-)__7_60466001_60491001D;SPAN=2138069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25
7	58796722	396226:2	A	A[7:58342553[	29	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=396226:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342553(-)-7:58796722(+)__7_58775501_58800501D;SPAN=454169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
7	60039036	396422:1	C	C[7:60527192[	59	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=396422:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039036(+)-7:60527192(-)__7_60515001_60540001D;SPAN=488156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	60039103	396423:1	T	T[7:60535194[	24	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=396423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039103(+)-7:60535194(-)__7_60515001_60540001D;SPAN=496091;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
7	60121773	396363:2	A	A[7:58174911[	23	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=396363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58174911(-)-7:60121773(+)__7_60098501_60123501D;SPAN=1946862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
7	60480878	396402:2	A	]7:58342809]A	22	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=396402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342809(+)-7:60480878(-)__7_60466001_60491001D;SPAN=2138069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25
7	60527192	396422:2	A	]7:60039036]A	59	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=396422:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039036(+)-7:60527192(-)__7_60515001_60540001D;SPAN=488156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	60527476	396432:1	C	C[7:60535187[	89	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=396432:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60527476(+)-7:60535187(-)__7_60515001_60540001D;SPAN=7711;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:46:23.6:89.6,0,23.6:0:31:-91.3:91.3
7	60535187	396432:2	C	]7:60527476]C	89	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=396432:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60527476(+)-7:60535187(-)__7_60515001_60540001D;SPAN=7711;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:46:23.6:89.6,0,23.6:0:31:-91.3:91.3
7	60535194	396423:2	G	]7:60039103]G	24	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=396423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039103(+)-7:60535194(-)__7_60515001_60540001D;SPAN=496091;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
7	60922568	396589:1	T	T]7:61053929]	29	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=396589:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60922568(+)-7:61053929(+)__7_60907001_60932001D;SPAN=131361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1
7	60996030	396795:1	T	]7:60996925]T	9	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=396795:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60996030(-)-7:60996925(+)__7_60980501_61005501D;SPAN=895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:61:9.5:9.5,0,141.5:0:8:-9.261:16.38
7	60996925	396795:2	G	G[7:60996030[	9	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=396795:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60996030(-)-7:60996925(+)__7_60980501_61005501D;SPAN=895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:61:9.5:9.5,0,141.5:0:8:-9.261:16.38
7	61053929	396589:2	T	T]7:60922568]	29	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=396589:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60922568(+)-7:61053929(+)__7_60907001_60932001D;SPAN=131361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1
7	61065398	762605:1	T	T]16:34714098]	82	PASS	DISC_MAPQ=8;EVDNC=ASDIS;INSERTION=CAAATAGACT;MAPQ=34;MATEID=762605:2;MATENM=20;NM=7;NUMPARTS=2;SCTG=c_16_34692001_34717001_199C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:35:3.5:82.7,0,3.5:21:10:-86.59:86.59
7	61444229	397521:1	A	A[7:61512571[	21	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=397521:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:61444229(+)-7:61512571(-)__7_61495001_61520001D;SPAN=68342;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34
7	61512571	397521:2	G	]7:61444229]G	21	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=397521:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:61444229(+)-7:61512571(-)__7_61495001_61520001D;SPAN=68342;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34
7	61964170	396165:2	N	N[7:58188890[	92	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=396165:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58188890(-)-7:61964170(+)__7_58187501_58212501D;SPAN=3775280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:4:8.4:92.4,8.4,0:0:30:-92.42:92.42
7	61967061	397693:2	N	]7:58175826]N	56	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=397693:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175826(+)-7:61967061(-)__7_61960501_61985501D;SPAN=3791235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:2:5.1:56.1,5.1,0:0:19:-56.11:56.11
7	61967062	396166:2	N	]7:58189293]N	42	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=396166:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58189293(+)-7:61967062(-)__7_58187501_58212501D;SPAN=3777769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	62334070	398109:2	T	T[3:89460367[	44	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=398109:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_62328001_62353001_253C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:5:14:-45.49:45.49
7	62541998	398596:1	A	A[7:62544473[	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=398596:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:62541998(+)-7:62544473(-)__7_62524001_62549001D;SPAN=2475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:62:9:17.1:188.1,17.1,0:0:62:-188.1:188.1
7	62544473	398596:2	C	]7:62541998]C	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=398596:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:62541998(+)-7:62544473(-)__7_62524001_62549001D;SPAN=2475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:62:9:17.1:188.1,17.1,0:0:62:-188.1:188.1
7	63016535	785911:1	G	G[17:21814103[	59	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=785911:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:63016535(+)-17:21814103(-)__17_21805001_21830001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	63836181	401745:1	A	A[7:67962940[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GAGCTCAGCTGAACATCTTGATATTTTTTCCATATTGCATCAGCTAGAATTGCCTAAGTAGAGT;MAPQ=60;MATEID=401745:2;MATENM=13;NM=1;NUMPARTS=3;REPSEQ=AA;SCTG=c_7_67963001_67988001_2C;SPAN=4126759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:84:13:23.4:257.4,23.4,0:82:18:-257.5:257.5
7	64372757	399579:1	C	C[7:64373063[	35	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=399579:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64361501_64386501_50C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:64:35:35,0,124.1:16:0:-34.83:37.74
7	64373063	399579:2	G	]7:64372757]G	35	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=399579:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64361501_64386501_50C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:64:35:35,0,124.1:16:0:-34.83:37.74
7	64821074	399907:1	T	]7:66532417]T	31	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=399907:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_7_64802501_64827501_30C;SECONDARY;SPAN=1711343;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:6:9:-30.9:31.08
7	64855446	399956:1	C	C[7:64857681[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTTATTTTATC;MAPQ=60;MATEID=399956:2;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_7_64851501_64876501_7C;SPAN=2235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:82:48:22.8:250.8,22.8,0:82:0:-250.9:250.9
7	64857681	399956:2	A	]7:64855446]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTTATTTTATC;MAPQ=60;MATEID=399956:1;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_7_64851501_64876501_7C;SPAN=2235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:82:48:22.8:250.8,22.8,0:82:0:-250.9:250.9
7	64952998	400010:1	T	T[7:64953657[	18	PASS	EVDNC=ASSMB;INSERTION=CTGTATC;MAPQ=60;MATEID=400010:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64949501_64974501_72C;SPAN=659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:100:18.2:18.2,0,232.7:14:0:-18.1:29.09
7	64953657	400010:2	T	]7:64952998]T	18	PASS	EVDNC=ASSMB;INSERTION=CTGTATC;MAPQ=60;MATEID=400010:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64949501_64974501_72C;SPAN=659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:100:18.2:18.2,0,232.7:14:0:-18.1:29.09
7	65084152	400626:1	A	A[7:65773613[	40	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=400626:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65084152(+)-7:65773613(-)__7_65758001_65783001D;SPAN=689461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:103:40.4:40.4,0,218.6:0:21:-40.37:47.41
7	65340142	475916:1	A	]8:127521605]A	99	PASS	DISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=475916:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127498001_127523001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:56:37.1:103.1,0,37.1:34:6:-104.7:104.7
7	65398431	400347:1	A	A]7:101463616]	58	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=400347:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65398431(+)-7:101463616(+)__7_65390501_65415501D;SPAN=36065185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:0:20:-60.44:60.44
7	65418384	400358:1	A	A]12:42898470]	52	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=400358:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418384(+)-12:42898470(+)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:6:4.8:52.8,4.8,0:0:18:-52.81:52.81
7	65418509	400359:1	G	[12:42898157[G	75	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=400359:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418509(-)-12:42898157(-)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92
7	65499251	541640:1	G	G]10:38950967]	27	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=541640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65499251(+)-10:38950967(+)__10_38930501_38955501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:33:27.2:27.2,0,53.6:0:11:-27.04:27.59
7	65610610	405317:1	A	[7:74063673[A	67	PASS	DISC_MAPQ=36;EVDNC=ASDIS;INSERTION=GGGTTGTTACAAACAAAAACTCCAATTTACAAACAAAACAAAAAACACCAGGAGGTT;MAPQ=60;MATEID=405317:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74063501_74088501_20C;SPAN=8453063;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:41:34.7:67.7,0,34.7:18:15:-68.24:68.24
7	65761388	400629:1	G	]7:65764818]G	38	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=400629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_65758001_65783001_12C;SPAN=3430;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:65:38:38,0,123.8:10:10:-37.85:40.49
7	65764818	400629:2	A	A[7:65761388[	38	PASS	DISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=22;MATEID=400629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_65758001_65783001_12C;SPAN=3430;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:65:38:38,0,123.8:10:10:-37.85:40.49
7	65773613	400626:2	T	]7:65084152]T	40	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=400626:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65084152(+)-7:65773613(-)__7_65758001_65783001D;SPAN=689461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:103:40.4:40.4,0,218.6:0:21:-40.37:47.41
7	66112826	400824:2	A	A[1:225835379[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=400824:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:225835379(-)-7:66112826(+)__7_66101001_66126001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:36:23:23,0,65.9:0:10:-22.89:24.13
7	66532417	399907:2	G	G[7:64821074[	31	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=399907:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_7_64802501_64827501_30C;SECONDARY;SPAN=1711343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:6:9:-30.9:31.08
7	67020338	401208:1	A	A[Un_KN707615v1_decoy:1[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=401208:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_67007501_67032501_17C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:45:65:31.4:130.4,0,31.4:45:0:-133.5:133.5
7	67021538	401212:1	T	T]7:72805222]	15	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=401212:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67021538(+)-7:72805222(+)__7_67007501_67032501D;SPAN=5783684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:64:15.2:15.2,0,143.9:0:10:-15.02:21.3
7	67048108	401222:1	G	G]7:72779501]	25	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=401222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67048108(+)-7:72779501(+)__7_67032001_67057001D;SPAN=5731393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
7	67962940	401745:2	T	]7:63836181]T	99	PASS	DISC_MAPQ=57;EVDNC=TSI_L;INSERTION=GAGCTCAGCTGAACATCTTGATATTTTTTCCATATTGCATCAGCTAGAATTGCCTAAGTAGAGT;MAPQ=60;MATEID=401745:1;MATENM=1;NM=13;NUMPARTS=3;REPSEQ=AA;SCTG=c_7_67963001_67988001_2C;SPAN=4126759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:84:13:23.4:257.4,23.4,0:82:18:-257.5:257.5
7	68949183	402429:1	C	]7:68949334]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAA;MAPQ=60;MATEID=402429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_68943001_68968001_29C;SPAN=151;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:48:90:93.5:133.1,0,93.5:48:0:-133.5:133.5
7	68949334	402429:2	A	A[7:68949183[	99	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAA;MAPQ=60;MATEID=402429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_68943001_68968001_29C;SPAN=151;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:48:90:93.5:133.1,0,93.5:48:0:-133.5:133.5
7	69663221	402862:1	T	T[7:69731113[	99	PASS	EVDNC=ASSMB;INSERTION=GAGCTCTGTTACATTAATGAGG;MAPQ=60;MATEID=402862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_69727001_69752001_13C;SPAN=67892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6
7	69731113	402862:2	G	]7:69663221]G	99	PASS	EVDNC=ASSMB;INSERTION=GAGCTCTGTTACATTAATGAGG;MAPQ=60;MATEID=402862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_69727001_69752001_13C;SPAN=67892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6
7	70126134	403057:1	T	T[7:70138905[	30	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=403057:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70119001_70144001_40C;SPAN=12771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15
7	70138905	403057:2	T	]7:70126134]T	30	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=403057:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70119001_70144001_40C;SPAN=12771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15
7	70139641	403167:1	A	A[7:70426389[	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_60C;SPAN=286748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:9:0:-19.31:21.11
7	70145470	403153:1	G	G[7:70382794[	37	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=403153:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70364001_70389001_0C;SPAN=237324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51
7	70175631	403093:1	C	C[7:70235698[	32	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=403093:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70175631(+)-7:70235698(-)__7_70217001_70242001D;SPAN=60067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
7	70235698	403093:2	C	]7:70175631]C	32	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=403093:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70175631(+)-7:70235698(-)__7_70217001_70242001D;SPAN=60067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
7	70268522	403109:1	A	A[7:70306354[	31	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=403109:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70268522(+)-7:70306354(-)__7_70266001_70291001D;SPAN=37832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06
7	70306354	403109:2	G	]7:70268522]G	31	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=403109:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70268522(+)-7:70306354(-)__7_70266001_70291001D;SPAN=37832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06
7	70382794	403153:2	T	]7:70145470]T	37	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=403153:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70364001_70389001_0C;SPAN=237324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51
7	70420834	403170:1	T	T[7:70424245[	21	PASS	EVDNC=ASSMB;HOMSEQ=CTGTCTT;MAPQ=60;MATEID=403170:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_21C;SPAN=3411;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:52:21.8:21.8,0,107.6:11:0:-21.69:25.03
7	70424245	403170:2	C	]7:70420834]C	21	PASS	EVDNC=ASSMB;HOMSEQ=CTGTCTT;MAPQ=60;MATEID=403170:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_21C;SPAN=3411;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:52:21.8:21.8,0,107.6:11:0:-21.69:25.03
7	70426389	403167:2	A	]7:70139641]A	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_60C;SPAN=286748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:9:0:-19.31:21.11
7	70534124	403303:1	A	A[7:70788701[	99	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403303:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70780501_70805501_85C;SPAN=254577;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:24:10.2:112.2,10.2,0:37:0:-112.2:112.2
7	70788701	403303:2	A	]7:70534124]A	99	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403303:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70780501_70805501_85C;SPAN=254577;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:24:10.2:112.2,10.2,0:37:0:-112.2:112.2
7	70956104	403416:1	A	A]7:70973945]	88	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=403416:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70956104(+)-7:70973945(+)__7_70952001_70977001D;SPAN=17841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:39:8.9:88.1,0,8.9:0:30:-91.66:91.66
7	70961199	403420:1	A	[7:70973894[A	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=403420:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_70952001_70977001_2C;SPAN=12695;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:69:55:19.2:211.2,19.2,0:46:37:-211.3:211.3
7	70973894	403420:2	T	[7:70961199[T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=403420:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_70952001_70977001_2C;SPAN=12695;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:69:55:19.2:211.2,19.2,0:46:37:-211.3:211.3
7	70973945	403416:2	G	G]7:70956104]	88	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=403416:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70956104(+)-7:70973945(+)__7_70952001_70977001D;SPAN=17841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:39:8.9:88.1,0,8.9:0:30:-91.66:91.66
7	71747047	403893:1	A	A[7:71747968[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=403893:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:71747047(+)-7:71747968(-)__7_71736001_71761001D;SPAN=921;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:6:13.2:145.2,13.2,0:0:48:-145.2:145.2
7	71747968	403893:2	G	]7:71747047]G	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=403893:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:71747047(+)-7:71747968(-)__7_71736001_71761001D;SPAN=921;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:6:13.2:145.2,13.2,0:0:48:-145.2:145.2
7	71849933	13069:2	C	]1:53954830]C	3	PASS	EVDNC=ASSMB;INSERTION=ACAGTACTACAATGAACACTCTTA;MAPQ=60;MATEID=13069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:93:3.8:3.8,0,228.2:9:0:-3.568:17.17
7	72499762	404355:1	A	A[9:69278069[	13	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=404355:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:72499762(+)-9:69278069(-)__7_72495501_72520501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:46:13.7:13.7,0,99.5:0:8:-13.48:17.45
7	72779501	401222:2	G	G]7:67048108]	25	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=401222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67048108(+)-7:72779501(+)__7_67032001_67057001D;SPAN=5731393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
7	72805222	401212:2	C	C]7:67021538]	15	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=401212:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67021538(+)-7:72805222(+)__7_67007501_67032501D;SPAN=5783684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:64:15.2:15.2,0,143.9:0:10:-15.02:21.3
7	72934712	404622:2	G	]7:49485855]G	47	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=404622:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:49485855(+)-7:72934712(-)__7_72912001_72937001D;SPAN=23448857;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:44:47:47,0,63.5:0:18:-47.05:47.19
7	72949883	405269:1	T	]7:73964039]T	9	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=405269:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73941001_73966001_52C;SPAN=1014156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:62:9.2:9.2,0,144.5:8:0:-8.98:16.32
7	73508991	404986:1	C	C[7:73509284[	1	PASS	EVDNC=ASSMB;HOMSEQ=TGCACTCCAGCCTGGGC;MAPQ=60;MATEID=404986:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_73500001_73525001_19C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:101:1.4:1.4,0,252.2:9:0:-1.319:16.83
7	73509284	404986:2	T	]7:73508991]T	1	PASS	EVDNC=ASSMB;HOMSEQ=TGCACTCCAGCCTGGGC;MAPQ=60;MATEID=404986:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_73500001_73525001_19C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:101:1.4:1.4,0,252.2:9:0:-1.319:16.83
7	73775876	405107:1	A	A[7:73776219[	0	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATTGA;MAPQ=60;MATEID=405107:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73769501_73794501_43C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:376:75.8:0,75.8,1099:9:0:75.98:11.6
7	73776219	405107:2	A	]7:73775876]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATTGA;MAPQ=60;MATEID=405107:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73769501_73794501_43C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:376:75.8:0,75.8,1099:9:0:75.98:11.6
7	73931246	405264:1	C	C[7:73931529[	0	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=405264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73916501_73941501_30C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:121:20.4:0,20.4,343.2:4:0:20.81:5.717
7	73931529	405264:2	C	]7:73931246]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=405264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73916501_73941501_30C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:121:20.4:0,20.4,343.2:4:0:20.81:5.717
7	73964039	405269:2	T	T[7:72949883[	9	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=405269:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73941001_73966001_52C;SPAN=1014156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:62:9.2:9.2,0,144.5:8:0:-8.98:16.32
7	74063673	405317:2	T	[7:65610610[T	67	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=GGGTTGTTACAAACAAAAACTCCAATTTACAAACAAAACAAAAAACACCAGGAGGTT;MAPQ=60;MATEID=405317:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74063501_74088501_20C;SPAN=8453063;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:41:34.7:67.7,0,34.7:18:15:-68.24:68.24
7	74135538	405369:1	C	C[7:74136636[	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=405369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:74135538(+)-7:74136636(-)__7_74112501_74137501D;SPAN=1098;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:56:18:15.6:171.6,15.6,0:0:56:-171.6:171.6
7	74136636	405369:2	T	]7:74135538]T	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=405369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:74135538(+)-7:74136636(-)__7_74112501_74137501D;SPAN=1098;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:56:18:15.6:171.6,15.6,0:0:56:-171.6:171.6
7	74414165	405574:1	G	G[7:74416932[	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG;MAPQ=60;MATEID=405574:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_74406501_74431501_111C;SPAN=2767;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:95:51:26.4:290.4,26.4,0:38:75:-290.5:290.5
7	74416932	405574:2	A	]7:74414165]A	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG;MAPQ=60;MATEID=405574:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_74406501_74431501_111C;SPAN=2767;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:95:51:26.4:290.4,26.4,0:38:75:-290.5:290.5
7	74689123	405771:1	G	[9:97902289[G	55	PASS	DISC_MAPQ=50;EVDNC=ASDIS;INSERTION=GCTGTAAAAATAATAAAAATAATAAACGGAGCTGCCTGGAGGCGGCCGCACTCG;MAPQ=60;MATEID=405771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_30C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:50:55.4:55.4,0,68.6:19:2:-55.27:55.37
7	74689227	405772:1	G	G[7:74690972[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=405772:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_24C;SPAN=1745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:95:0:0,0,237.6:7:2:0.2957:14.75
7	74690972	405772:2	G	]7:74689227]G	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=405772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_24C;SPAN=1745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:95:0:0,0,237.6:7:2:0.2957:14.75
7	74691113	405776:1	T	T[7:74698961[	2	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=405776:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_21C;SPAN=7848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:122:2.3:2.3,0,302.6:11:0:-2.018:20.63
7	74698961	405776:2	G	]7:74691113]G	2	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=405776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_21C;SPAN=7848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:122:2.3:2.3,0,302.6:11:0:-2.018:20.63
7	74699096	405780:1	G	G[7:74700246[	0	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=405780:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_28C;SPAN=1150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:143:20.2:0,20.2,399.3:6:0:20.39:9.202
7	74700246	405780:2	G	]7:74699096]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=405780:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_28C;SPAN=1150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:143:20.2:0,20.2,399.3:6:0:20.39:9.202
7	75759979	406698:1	T	T]7:101055231]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=406698:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:75759979(+)-7:101055231(+)__7_75754001_75779001D;SPAN=25295252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:0:9:-21.84:22.4
7	76182048	406928:1	C	[7:76200223[C	51	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=AAATATAAACATTTGTCACAAGAGGTCTACTTCCTTTTGGATATTTTCACA;MAPQ=60;MATEID=406928:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_76195001_76220001_68C;SPAN=18175;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:51:51.8:51.8,0,74.9:18:6:-51.68:51.95
7	76200223	406928:2	T	[7:76182048[T	51	PASS	DISC_MAPQ=42;EVDNC=ASDIS;INSERTION=AAATATAAACATTTGTCACAAGAGGTCTACTTCCTTTTGGATATTTTCACA;MAPQ=60;MATEID=406928:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_76195001_76220001_68C;SPAN=18175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:51:51.8:51.8,0,74.9:18:6:-51.68:51.95
7	76455113	407277:1	C	C]7:76621893]	36	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=407277:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76455113(+)-7:76621893(+)__7_76611501_76636501D;SPAN=166780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
7	76491075	407182:1	C	]7:76989236]C	17	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=407182:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76491075(-)-7:76989236(+)__7_76489001_76514001D;SPAN=498161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
7	76621893	407277:2	T	T]7:76455113]	36	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=407277:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76455113(+)-7:76621893(+)__7_76611501_76636501D;SPAN=166780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
7	76846695	407388:2	A	A[1:83390671[	16	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=407388:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390671(-)-7:76846695(+)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51
7	76847406	407389:2	C	]1:83390908]C	47	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=407389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390908(+)-7:76847406(-)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:0:17:-47.25:47.25
7	76882570	407403:2	C	C[1:83426016[	25	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=407403:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83426016(-)-7:76882570(+)__7_76881001_76906001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
7	76989236	407182:2	T	T[7:76491075[	17	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=407182:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76491075(-)-7:76989236(+)__7_76489001_76514001D;SPAN=498161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
7	77167731	407669:1	A	[7:102703463[A	9	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=407669:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:77167731(-)-7:102703463(-)__7_77150501_77175501D;SPAN=25535732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5
7	77647707	407937:1	A	A[7:77648087[	0	PASS	EVDNC=ASSMB;HOMSEQ=GTGGCTCAGGCCTGTAATCCCAGCATTTTGGGA;MAPQ=60;MATEID=407937:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_77640501_77665501_7C;SPAN=380;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:116:12.6:0,12.6,316.8:6:0:12.8:9.755
7	77648087	407937:2	G	]7:77647707]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GTGGCTCAGGCCTGTAATCCCAGCATTTTGGGA;MAPQ=60;MATEID=407937:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_77640501_77665501_7C;SPAN=380;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:116:12.6:0,12.6,316.8:6:0:12.8:9.755
7	77743978	407983:1	G	G[7:77744269[	0	PASS	EVDNC=ASSMB;HOMSEQ=CAAGTGATCCTCCTGCCTTG;MAPQ=60;MATEID=407983:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_3C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:101:15:0,15,283.8:4:0:15.19:6.033
7	77744269	407983:2	C	]7:77743978]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CAAGTGATCCTCCTGCCTTG;MAPQ=60;MATEID=407983:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_3C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:101:15:0,15,283.8:4:0:15.19:6.033
7	77744324	407984:1	C	C[7:77744670[	0	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCAC;MAPQ=60;MATEID=407984:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_77738501_77763501_34C;SPAN=346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:92:9:0,9,247.5:5:0:9.356:8.239
7	77744670	407984:2	G	]7:77744324]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCAC;MAPQ=60;MATEID=407984:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_34C;SPAN=346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:92:9:0,9,247.5:5:0:9.356:8.239
7	78728545	408490:1	T	T[7:78728865[	23	PASS	EVDNC=ASSMB;HOMSEQ=CCATCTTTCTCTGATCTTTTT;MAPQ=60;MATEID=408490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_78718501_78743501_70C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:11:0:-23.94:25.95
7	78728865	408490:2	C	]7:78728545]C	23	PASS	EVDNC=ASSMB;HOMSEQ=CCATCTTTCTCTGATCTTTTT;MAPQ=60;MATEID=408490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_78718501_78743501_70C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:11:0:-23.94:25.95
7	79125345	412757:1	G	G[7:89181391[	47	PASS	EVDNC=ASSMB;INSERTION=CCCACCAGTTGTTTCAGTGCTGTAG;MAPQ=60;MATEID=412757:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_89180001_89205001_22C;SPAN=10056046;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6
7	79131175	408662:1	C	]20:54159808]C	34	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=408662:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79110501_79135501_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03
7	79780343	408962:1	T	T[7:79780659[	0	PASS	EVDNC=ASSMB;INSERTION=TTGG;MAPQ=60;MATEID=408962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79772001_79797001_32C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:60:0.3:0,0.3,151.8:5:0:0.3605:9.196
7	79780659	408962:2	G	]7:79780343]G	0	PASS	EVDNC=ASSMB;INSERTION=TTGG;MAPQ=60;MATEID=408962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79772001_79797001_32C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:60:0.3:0,0.3,151.8:5:0:0.3605:9.196
7	80423705	409225:1	C	[7:80603806[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAAATTGAATTGTAATT;MAPQ=60;MATEID=409225:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80409001_80434001_4C;SPAN=180101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:41:12.6:138.6,12.6,0:29:33:-138.6:138.6
7	80603145	412890:1	A	A[7:89377687[	31	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=412890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_89376001_89401001_13C;SPAN=8774542;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:12:0:-31.74:31.78
7	80603806	409225:2	A	[7:80423705[A	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=ACAAATTGAATTGTAATT;MAPQ=60;MATEID=409225:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80409001_80434001_4C;SPAN=180101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:41:12.6:138.6,12.6,0:29:33:-138.6:138.6
7	80607496	409352:1	G	]7:80633495]G	3	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=409352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80629501_80654501_61C;SPAN=25999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:69:3.8:3.8,0,168.8:7:0:-3.712:13.5
7	80633495	409352:2	A	A[7:80607496[	3	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=409352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80629501_80654501_61C;SPAN=25999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:69:3.8:3.8,0,168.8:7:0:-3.712:13.5
7	80708581	409412:1	A	A[7:80710038[	0	PASS	EVDNC=ASSMB;INSERTION=CACATATCTAT;MAPQ=60;MATEID=409412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80703001_80728001_87C;SPAN=1457;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:107:13.2:0,13.2,293.7:5:0:13.57:7.905
7	80710038	409412:2	A	]7:80708581]A	0	PASS	EVDNC=ASSMB;INSERTION=CACATATCTAT;MAPQ=60;MATEID=409412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80703001_80728001_87C;SPAN=1457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:107:13.2:0,13.2,293.7:5:0:13.57:7.905
7	80914418	409531:2	T	[5:43086248[T	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=409531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:43086248(-)-7:80914418(-)__7_80899001_80924001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:63:15.5:15.5,0,140.9:0:10:-15.3:21.37
7	81172281	409712:2	T	T]5:59692516]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=409712:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692516(+)-7:81172281(+)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:40:25.1:25.1,0,74.6:0:11:-25.07:26.48
7	81172383	409717:1	G	G[7:81172710[	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCAGTTTCTT;MAPQ=60;MATEID=409717:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_81168501_81193501_5C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:31:18.3:201.3,18.3,0:48:21:-201.3:201.3
7	81172709	409711:2	A	[5:59692316[A	59	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=409711:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692316(-)-7:81172709(-)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:12:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	81172710	409717:2	A	]7:81172383]A	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCAGTTTCTT;MAPQ=60;MATEID=409717:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_81168501_81193501_5C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:31:18.3:201.3,18.3,0:48:21:-201.3:201.3
7	81812267	409937:1	T	T[7:81813154[	92	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=409937:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:81812267(+)-7:81813154(-)__7_81805501_81830501D;SPAN=887;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:31:8.4:92.4,8.4,0:0:28:-90.61:90.61
7	81813154	409937:2	A	]7:81812267]A	92	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=409937:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:81812267(+)-7:81813154(-)__7_81805501_81830501D;SPAN=887;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:31:8.4:92.4,8.4,0:0:28:-90.61:90.61
7	82099424	410047:1	T	T[7:82099749[	99	PASS	EVDNC=ASSMB;HOMSEQ=GCAATACCTTCTT;MAPQ=60;MATEID=410047:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_82099501_82124501_74C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3
7	82099749	410047:2	G	]7:82099424]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GCAATACCTTCTT;MAPQ=60;MATEID=410047:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_82099501_82124501_74C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3
7	82809484	410398:1	T	T[7:83071482[	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=410398:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:82809484(+)-7:83071482(-)__7_82785501_82810501D;SPAN=261998;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
7	83071482	410398:2	C	]7:82809484]C	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=410398:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:82809484(+)-7:83071482(-)__7_82785501_82810501D;SPAN=261998;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
7	84080562	410862:1	T	T[7:84080872[	99	PASS	EVDNC=ASSMB;HOMSEQ=GCAGCTTATAATTCTTT;MAPQ=60;MATEID=410862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_84059501_84084501_52C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:31:12.6:138.6,12.6,0:46:0:-138.6:138.6
7	84080872	410862:2	G	]7:84080562]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GCAGCTTATAATTCTTT;MAPQ=60;MATEID=410862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_84059501_84084501_52C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:31:12.6:138.6,12.6,0:46:0:-138.6:138.6
7	85417192	411352:1	T	]7:85451315]T	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=411352:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:85417192(-)-7:85451315(+)__7_85431501_85456501D;SPAN=34123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07
7	85451315	411352:2	A	A[7:85417192[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=411352:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:85417192(-)-7:85451315(+)__7_85431501_85456501D;SPAN=34123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07
7	87380246	412124:1	C	]7:87380395]C	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=412124:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_87367001_87392001_74C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:82:66.2:66.2,0,138.8:27:0:-66.08:67.55
7	87380395	412124:2	G	G[7:87380246[	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=412124:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_87367001_87392001_74C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:82:66.2:66.2,0,138.8:27:0:-66.08:67.55
7	89181391	412757:2	T	]7:79125345]T	47	PASS	EVDNC=ASSMB;INSERTION=CCCACCAGTTGTTTCAGTGCTGTAG;MAPQ=60;MATEID=412757:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_89180001_89205001_22C;SPAN=10056046;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6
7	89377687	412890:2	T	]7:80603145]T	31	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=412890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_89376001_89401001_13C;SPAN=8774542;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:12:0:-31.74:31.78
7	89969570	413136:1	T	T[7:89969875[	88	PASS	EVDNC=ASSMB;HOMSEQ=GACCTTATTCTT;MAPQ=60;MATEID=413136:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_89964001_89989001_156C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:38:5.9:88.4,0,5.9:30:0:-92.39:92.39
7	89969875	413136:2	G	]7:89969570]G	88	PASS	EVDNC=ASSMB;HOMSEQ=GACCTTATTCTT;MAPQ=60;MATEID=413136:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_89964001_89989001_156C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:38:5.9:88.4,0,5.9:30:0:-92.39:92.39
7	90181095	413225:1	C	C[7:90183286[	50	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=413225:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_90160001_90185001_65C;SPAN=2191;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
7	90183286	413225:2	G	]7:90181095]G	50	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=58;MATEID=413225:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_90160001_90185001_65C;SPAN=2191;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
7	92838560	414210:1	C	C]7:93538835]	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=414210:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:92838560(+)-7:93538835(+)__7_92830501_92855501D;SPAN=700275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:0:14:-37.78:37.78
7	93347523	565388:1	A	]10:110418405]A	72	PASS	DISC_MAPQ=20;EVDNC=ASDIS;MAPQ=60;MATEID=565388:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_110397001_110422001_54C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:12:6.6:72.6,6.6,0:14:15:-72.62:72.62
7	93538835	414210:2	T	T]7:92838560]	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=414210:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:92838560(+)-7:93538835(+)__7_92830501_92855501D;SPAN=700275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:0:14:-37.78:37.78
7	93787629	414547:1	T	T[7:93793680[	69	PASS	EVDNC=ASSMB;HOMSEQ=TAATCATCATTCTT;MAPQ=60;MATEID=414547:2;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_7_93786001_93811001_47C;SPAN=6051;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:17:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	93793680	414547:2	T	]7:93787629]T	69	PASS	EVDNC=ASSMB;HOMSEQ=TAATCATCATTCTT;MAPQ=60;MATEID=414547:1;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_7_93786001_93811001_47C;SPAN=6051;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:17:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	93912504	414574:1	C	C[7:93913228[	37	PASS	DISC_MAPQ=36;EVDNC=ASDIS;INSERTION=CAA;MAPQ=60;MATEID=414574:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_93908501_93933501_70C;SPAN=724;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:6:11:-38.44:38.44
7	93913228	414574:2	T	]7:93912504]T	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAA;MAPQ=60;MATEID=414574:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_93908501_93933501_70C;SPAN=724;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:6:11:-38.44:38.44
7	94308706	414626:1	T	]17:61570856]T	24	PASS	EVDNC=ASSMB;INSERTION=GACTTGCTCT;MAPQ=60;MATEID=414626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_94300501_94325501_8C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
7	94467518	461134:1	A	]8:86399769]A	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=461134:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_86387001_86412001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:11:11:-37.05:37.05
7	95756956	415049:1	T	T[7:95757273[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCATTGGATTTGTT;MAPQ=60;MATEID=415049:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_7_95746001_95771001_72C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:25:14.7:161.7,14.7,0:40:18:-161.7:161.7
7	95757273	415049:2	C	]7:95756956]C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCATTGGATTTGTT;MAPQ=60;MATEID=415049:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_7_95746001_95771001_72C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:25:14.7:161.7,14.7,0:40:18:-161.7:161.7
7	96846589	415398:1	C	C[7:96852683[	92	PASS	EVDNC=ASSMB;HOMSEQ=GCAACTGGAACTTTC;MAPQ=60;MATEID=415398:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_96848501_96873501_26C;SPAN=6094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:25:8.4:92.4,8.4,0:30:0:-92.42:92.42
7	96852683	415398:2	G	]7:96846589]G	92	PASS	EVDNC=ASSMB;HOMSEQ=GCAACTGGAACTTTC;MAPQ=60;MATEID=415398:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_96848501_96873501_26C;SPAN=6094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:25:8.4:92.4,8.4,0:30:0:-92.42:92.42
7	97260359	415757:1	A	A[7:97999493[	46	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=44;MATEID=415757:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97975501_98000501_51C;SPAN=739134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	97265435	415571:1	T	T[7:97265662[	69	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACCTCAGTCCTT;MAPQ=60;MATEID=415571:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97265001_97290001_19C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	97265662	415571:2	A	]7:97265435]A	69	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACCTCAGTCCTT;MAPQ=60;MATEID=415571:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97265001_97290001_19C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	97805476	415701:1	C	C[7:97806091[	75	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGGAGAATCCCTTGAACCCGGGAGGC;MAPQ=60;MATEID=415701:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_97804001_97829001_6C;SPAN=615;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:17:6.9:75.9,6.9,0:17:18:-75.92:75.92
7	97806091	415701:2	A	]7:97805476]A	75	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=AGGAGAATCCCTTGAACCCGGGAGGC;MAPQ=60;MATEID=415701:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_97804001_97829001_6C;SPAN=615;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:17:6.9:75.9,6.9,0:17:18:-75.92:75.92
7	97999493	415757:2	A	]7:97260359]A	46	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=415757:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97975501_98000501_51C;SPAN=739134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	98344850	62784:2	C	C]1:232116541]	46	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=GATTCTCCTGCCTCA;MAPQ=35;MATEID=62784:1;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_1_232113001_232138001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:14:2:-46.21:46.21
7	98547954	416031:1	A	]7:98548572]A	64	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=416031:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:98547954(-)-7:98548572(+)__7_98539001_98564001D;SPAN=618;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:53:64.4:64.4,0,67.7:0:24:-64.33:64.34
7	98548572	416031:2	C	C[7:98547954[	64	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=416031:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:98547954(-)-7:98548572(+)__7_98539001_98564001D;SPAN=618;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:53:64.4:64.4,0,67.7:0:24:-64.33:64.34
7	100458672	426184:1	T	]7:129517338]T	52	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCCCAGCACTTTGGGAGGCCGAGG;INSERTION=CCAGGTGCAGTGGCTCACACCTGTAT;MAPQ=17;MATEID=426184:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_129507001_129532001_32C;SPAN=29058666;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81
7	100470421	416704:2	A	[1:228154057[A	79	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=416704:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100450001_100475001_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:15:7.2:79.2,7.2,0:14:19:-79.22:79.22
7	100658692	62042:2	G	]1:228212126]G	20	PASS	EVDNC=ASSMB;INSERTION=TGGAGGGTTTGGGAGCCTGTCCA;MAPQ=60;MATEID=62042:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_228193001_228218001_63C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
7	100729963	416768:1	T	T[7:100743094[	93	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GCTCACTGCAACCT;MAPQ=60;MATEID=416768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100719501_100744501_39C;SPAN=13131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:44:17.3:93.2,0,17.3:23:15:-96.2:96.2
7	100743094	416768:2	G	]7:100729963]G	93	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCTCACTGCAACCT;MAPQ=60;MATEID=416768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100719501_100744501_39C;SPAN=13131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:44:17.3:93.2,0,17.3:23:15:-96.2:96.2
7	100770427	416800:1	C	[7:100773213[C	8	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=416800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100768501_100793501_79C;SPAN=2786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:66:8:8,0,156.5:6:7:-7.856:16.09
7	100773213	416800:2	A	[7:100770427[A	8	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=416800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100768501_100793501_79C;SPAN=2786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:66:8:8,0,156.5:6:7:-7.856:16.09
7	100788247	416796:2	G	G[7:57352716[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=416796:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57352716(-)-7:100788247(+)__7_100768501_100793501D;SPAN=43435531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42
7	100804168	416828:1	T	T[7:100804454[	0	PASS	EVDNC=ASSMB;HOMSEQ=ACAGGCACGCACCACCATGCCCAGCTAATTTTT;MAPQ=60;MATEID=416828:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100793001_100818001_64C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:60:3.6:0,3.6,158.4:4:0:3.662:6.956
7	100804454	416828:2	A	]7:100804168]A	0	PASS	EVDNC=ASSMB;HOMSEQ=ACAGGCACGCACCACCATGCCCAGCTAATTTTT;MAPQ=60;MATEID=416828:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100793001_100818001_64C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:60:3.6:0,3.6,158.4:4:0:3.662:6.956
7	100867063	417117:1	G	G[7:101077595[	42	PASS	EVDNC=ASSMB;INSERTION=GACTAATTCC;MAPQ=60;MATEID=417117:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_101062501_101087501_16C;SPAN=210532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:26:22.4:42.2,0,22.4:15:0:-42.5:42.5
7	100961967	417018:1	T	T[7:100962263[	63	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTTACCT;MAPQ=60;MATEID=417018:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_100940001_100965001_355C;SPAN=296;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:45:50:63.2,0,50:23:0:-63.36:63.36
7	100962263	417018:2	A	]7:100961967]A	63	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTTACCT;MAPQ=60;MATEID=417018:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_100940001_100965001_355C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:45:50:63.2,0,50:23:0:-63.36:63.36
7	101055231	406698:2	A	A]7:75759979]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=406698:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:75759979(+)-7:101055231(+)__7_75754001_75779001D;SPAN=25295252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:0:9:-21.84:22.4
7	101077595	417117:2	C	]7:100867063]C	42	PASS	EVDNC=ASSMB;INSERTION=GACTAATTCC;MAPQ=60;MATEID=417117:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_101062501_101087501_16C;SPAN=210532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:26:22.4:42.2,0,22.4:15:0:-42.5:42.5
7	101357985	417375:1	T	T[7:101360515[	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAATTTTTGTATTTTT;MAPQ=60;MATEID=417375:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_101356501_101381501_58C;SPAN=2530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7
7	101360515	417375:2	C	]7:101357985]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAATTTTTGTATTTTT;MAPQ=60;MATEID=417375:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_101356501_101381501_58C;SPAN=2530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7
7	101415969	417445:1	T	T[7:101416963[	70	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=417445:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:101415969(+)-7:101416963(-)__7_101405501_101430501D;SPAN=994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:44:40.4:70.1,0,40.4:0:25:-70.58:70.58
7	101416963	417445:2	A	]7:101415969]A	70	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=417445:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:101415969(+)-7:101416963(-)__7_101405501_101430501D;SPAN=994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:44:40.4:70.1,0,40.4:0:25:-70.58:70.58
7	101463616	400347:2	T	T]7:65398431]	58	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=400347:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65398431(+)-7:101463616(+)__7_65390501_65415501D;SPAN=36065185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:0:20:-60.44:60.44
7	101690931	417617:1	T	T[7:101691236[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACCTGGCTCATTTTT;MAPQ=60;MATEID=417617:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_101675001_101700001_67C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:12:7:-46.21:46.21
7	101691236	417617:2	C	]7:101690931]C	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACCTGGCTCATTTTT;MAPQ=60;MATEID=417617:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_101675001_101700001_67C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:12:7:-46.21:46.21
7	102703463	407669:2	T	[7:77167731[T	9	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=407669:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:77167731(-)-7:102703463(-)__7_77150501_77175501D;SPAN=25535732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5
7	102848273	418158:1	G	G[7:102848597[	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATACACATTCG;MAPQ=60;MATEID=418158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_102826501_102851501_41C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:84:0.3:0,0.3,211.2:7:0:0.5047:12.88
7	102848597	418158:2	A	]7:102848273]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATACACATTCG;MAPQ=60;MATEID=418158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_102826501_102851501_41C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:84:0.3:0,0.3,211.2:7:0:0.5047:12.88
7	104489080	418722:1	T	T[7:104489349[	82	PASS	EVDNC=ASSMB;HOMSEQ=GTGCTGAAATCTT;MAPQ=60;MATEID=418722:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_104468001_104493001_3C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:24:7.5:82.5,7.5,0:27:0:-82.52:82.52
7	104489349	418722:2	G	]7:104489080]G	82	PASS	EVDNC=ASSMB;HOMSEQ=GTGCTGAAATCTT;MAPQ=60;MATEID=418722:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_104468001_104493001_3C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:24:7.5:82.5,7.5,0:27:0:-82.52:82.52
7	104546954	418744:1	A	A[7:104547269[	59	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATAGTAGCTCAA;MAPQ=60;MATEID=418744:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_104541501_104566501_49C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15
7	104547269	418744:2	A	]7:104546954]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATAGTAGCTCAA;MAPQ=60;MATEID=418744:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_104541501_104566501_49C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15
7	105520479	419121:1	G	[7:105521175[G	8	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGGC;MAPQ=60;MATEID=419121:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_105497001_105522001_197C;SPAN=696;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:5:3:-8.844:12.73
7	105521175	419121:2	G	[7:105520479[G	8	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGGC;MAPQ=60;MATEID=419121:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_105497001_105522001_197C;SPAN=696;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:5:3:-8.844:12.73
7	106074072	419438:1	C	]7:106208676]C	48	PASS	DISC_MAPQ=53;EVDNC=TSI_L;INSERTION=TA;MAPQ=60;MATEID=419438:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=134604;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:13:9:-49.68:49.68
7	106074178	419439:1	C	C[7:106081493[	46	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCACC;INSERTION=TA;MAPQ=60;MATEID=419439:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_7_106207501_106232501_21C;SPAN=7315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:0:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	106081493	419441:1	T	]7:106208676]T	55	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCACC;INSERTION=TACCATTGGACAGCCATACTCCAGGGAAAGGTCATTTTCCCACTCCATCCGCTTTCCGGCTCCCTGCTGACAGCCACCTCCACCACTCAATAAAACCCCCACAT;MAPQ=60;MATEID=419441:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=127183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:26:9.2:55.4,0,9.2:19:0:-57.2:57.2
7	106081493	419439:2	T	]7:106074178]T	46	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCACC;INSERTION=TA;MAPQ=60;MATEID=419439:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_7_106207501_106232501_21C;SPAN=7315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:0:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	106093547	419392:1	C	C[7:106093883[	80	PASS	EVDNC=ASSMB;HOMSEQ=CAC;MAPQ=60;MATEID=419392:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_106085001_106110001_69C;SPAN=336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
7	106093883	419392:2	C	]7:106093547]C	80	PASS	EVDNC=ASSMB;HOMSEQ=CAC;MAPQ=60;MATEID=419392:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_106085001_106110001_69C;SPAN=336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
7	106208676	419441:2	T	T[7:106081493[	55	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCACC;INSERTION=TACCATTGGACAGCCATACTCCAGGGAAAGGTCATTTTCCCACTCCATCCGCTTTCCGGCTCCCTGCTGACAGCCACCTCCACCACTCAATAAAACCCCCACAT;MAPQ=60;MATEID=419441:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=127183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:26:9.2:55.4,0,9.2:19:0:-57.2:57.2
7	106208676	419438:2	T	T[7:106074072[	48	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=TA;MAPQ=60;MATEID=419438:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=134604;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:13:9:-49.68:49.68
7	107823624	419930:1	A	A[7:107824295[	95	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=419930:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_107800001_107825001_4C;SPAN=671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:25:8.7:95.7,8.7,0:32:0:-95.72:95.72
7	107824295	419930:2	G	]7:107823624]G	95	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=419930:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_107800001_107825001_4C;SPAN=671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:25:8.7:95.7,8.7,0:32:0:-95.72:95.72
7	108712413	420213:1	A	A[7:108712728[	7	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGGAAAGA;MAPQ=60;MATEID=420213:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_108706501_108731501_59C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:21:7.4:7.4,0,43.7:4:0:-7.301:8.898
7	108712728	420213:2	A	]7:108712413]A	7	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGGAAAGA;MAPQ=60;MATEID=420213:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_108706501_108731501_59C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:21:7.4:7.4,0,43.7:4:0:-7.301:8.898
7	109796632	420517:1	T	T[7:109813845[	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=420517:2;MATENM=8;NM=5;NUMPARTS=2;SCTG=c_7_109809001_109834001_9C;SPAN=17213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:9:13.5:148.5,13.5,0:27:35:-148.5:148.5
7	109813845	420517:2	T	]7:109796632]T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=420517:1;MATENM=5;NM=8;NUMPARTS=2;SCTG=c_7_109809001_109834001_9C;SPAN=17213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:9:13.5:148.5,13.5,0:27:35:-148.5:148.5
7	110541911	420747:1	T	T[7:110548376[	19	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=420747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_110544001_110569001_88C;SPAN=6465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:7:1.8:19.8,1.8,0:7:0:-19.8:19.8
7	110548376	420747:2	T	]7:110541911]T	19	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=420747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_110544001_110569001_88C;SPAN=6465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:7:1.8:19.8,1.8,0:7:0:-19.8:19.8
7	111002957	420853:1	A	A[7:111065631[	20	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=420853:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111058501_111083501_11C;SPAN=62674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82
7	111065631	420853:2	A	]7:111002957]A	20	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=420853:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111058501_111083501_11C;SPAN=62674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82
7	111077514	420873:1	G	G[7:111178811[	29	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=420873:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111156501_111181501_10C;SPAN=101297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
7	111113982	420868:1	A	A[7:111115536[	32	PASS	EVDNC=ASSMB;INSERTION=TAAAGAGAGTGTAAA;MAPQ=60;MATEID=420868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111107501_111132501_10C;SPAN=1554;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
7	111115536	420868:2	T	]7:111113982]T	32	PASS	EVDNC=ASSMB;INSERTION=TAAAGAGAGTGTAAA;MAPQ=60;MATEID=420868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111107501_111132501_10C;SPAN=1554;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
7	111178811	420873:2	T	]7:111077514]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=420873:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111156501_111181501_10C;SPAN=101297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
7	111413698	420918:1	A	A[12:107809482[	75	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=420918:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_111401501_111426501_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92
7	111682701	916278:1	G	]22:28669482]G	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=916278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_206C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:102:5.4:0,5.4,267.3:7:2:5.564:12.26
7	113776121	421472:1	T	T[7:113782153[	75	PASS	EVDNC=ASSMB;HOMSEQ=CATAATGGCATTTTT;MAPQ=60;MATEID=421472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_113778001_113803001_26C;SPAN=6032;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92
7	113782153	421472:2	C	]7:113776121]C	75	PASS	EVDNC=ASSMB;HOMSEQ=CATAATGGCATTTTT;MAPQ=60;MATEID=421472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_113778001_113803001_26C;SPAN=6032;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92
7	114313463	421622:1	C	C[7:114313759[	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAAATATTGTC;MAPQ=60;MATEID=421622:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_114292501_114317501_13C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
7	114313759	421622:2	A	]7:114313463]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAAATATTGTC;MAPQ=60;MATEID=421622:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_114292501_114317501_13C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
7	117201963	422406:1	T	T[7:117202261[	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCGAAGCTATCTT;MAPQ=60;MATEID=422406:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_117183501_117208501_4C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:13:12:-72.62:72.62
7	117202261	422406:2	C	]7:117201963]C	72	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCGAAGCTATCTT;MAPQ=60;MATEID=422406:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_117183501_117208501_4C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:13:12:-72.62:72.62
7	118253913	422590:1	C	C[7:118254199[	46	PASS	EVDNC=ASSMB;HOMSEQ=CATCCTTGTGTATTTTC;MAPQ=60;MATEID=422590:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_118237001_118262001_43C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
7	118254199	422590:2	C	]7:118253913]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CATCCTTGTGTATTTTC;MAPQ=60;MATEID=422590:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_118237001_118262001_43C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
7	119191314	422887:1	A	A[7:119194700[	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=422887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:119191314(+)-7:119194700(-)__7_119192501_119217501D;SPAN=3386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:7:8.4:92.4,8.4,0:0:30:-92.42:92.42
7	119194700	422887:2	G	]7:119191314]G	92	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=422887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:119191314(+)-7:119194700(-)__7_119192501_119217501D;SPAN=3386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:7:8.4:92.4,8.4,0:0:30:-92.42:92.42
7	120983381	423222:2	C	C[6:70153588[	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:70153588(-)-7:120983381(+)__7_120981001_121006001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
7	121241062	423316:1	G	G[7:121241381[	64	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGAAATTATAAAACAG;MAPQ=60;MATEID=423316:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_121226001_121251001_119C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:29:8.3:64.4,0,8.3:18:7:-66.94:66.94
7	121241381	423316:2	A	]7:121241062]A	64	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGAAATTATAAAACAG;MAPQ=60;MATEID=423316:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_121226001_121251001_119C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:29:8.3:64.4,0,8.3:18:7:-66.94:66.94
7	121522363	423406:1	C	[7:121522547[C	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423406:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:121522363(-)-7:121522547(-)__7_121520001_121545001D;SPAN=184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:0:10:-26.83:26.83
7	121522547	423406:2	A	[7:121522363[A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423406:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:121522363(-)-7:121522547(-)__7_121520001_121545001D;SPAN=184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:0:10:-26.83:26.83
7	122571822	423890:1	T	T[7:122796082[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=423890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_122794001_122819001_30C;SPAN=224260;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21
7	122796082	423890:2	G	]7:122571822]G	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=423890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_122794001_122819001_30C;SPAN=224260;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21
7	123137650	424046:1	G	]7:123249081]G	18	PASS	EVDNC=ASSMB;INSERTION=CCCGGAAGGT;MAPQ=60;MATEID=424046:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_123235001_123260001_45C;SPAN=111431;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
7	123249081	424046:2	A	A[7:123137650[	18	PASS	EVDNC=ASSMB;INSERTION=CCCGGAAGGT;MAPQ=60;MATEID=424046:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_123235001_123260001_45C;SPAN=111431;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
7	123280266	424085:1	A	]7:123375157]A	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=424085:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:123280266(-)-7:123375157(+)__7_123357501_123382501D;SPAN=94891;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99
7	123375157	424085:2	C	C[7:123280266[	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=424085:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:123280266(-)-7:123375157(+)__7_123357501_123382501D;SPAN=94891;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99
7	125624166	634200:1	C	C[12:73620587[	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATA;MAPQ=60;MATEID=634200:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_12_73598001_73623001_3C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:24:6.9:75.9,6.9,0:24:7:-75.92:75.92
7	126105456	425065:1	G	]7:126150623]G	18	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=425065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_126150501_126175501_8C;SPAN=45167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
7	126150623	425065:2	T	T[7:126105456[	18	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=425065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_126150501_126175501_8C;SPAN=45167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
7	128126376	425599:1	T	T[7:128126677[	59	PASS	EVDNC=ASSMB;HOMSEQ=GGGCACAGCATCTT;MAPQ=60;MATEID=425599:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128110501_128135501_5C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:16:5.4:59.4,5.4,0:20:0:-59.41:59.41
7	128126677	425599:2	G	]7:128126376]G	59	PASS	EVDNC=ASSMB;HOMSEQ=GGGCACAGCATCTT;MAPQ=60;MATEID=425599:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128110501_128135501_5C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:16:5.4:59.4,5.4,0:20:0:-59.41:59.41
7	128669172	425900:1	T	T[7:128669476[	41	PASS	EVDNC=ASSMB;HOMSEQ=TGAACACCAGCTCTT;MAPQ=60;MATEID=425900:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128649501_128674501_79C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
7	128669476	425900:2	T	]7:128669172]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TGAACACCAGCTCTT;MAPQ=60;MATEID=425900:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128649501_128674501_79C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
7	129202957	426099:1	C	C[7:129204303[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=426099:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_129188501_129213501_47C;SPAN=1346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:5:8:-23.24:23.37
7	129204303	426099:2	A	]7:129202957]A	23	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=426099:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_129188501_129213501_47C;SPAN=1346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:5:8:-23.24:23.37
7	129517338	426184:2	G	G[7:100458672[	52	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCCCAGCACTTTGGGAGGCCGAGG;INSERTION=CCAGGTGCAGTGGCTCACACCTGTAT;MAPQ=60;MATEID=426184:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_129507001_129532001_32C;SPAN=29058666;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81
7	131224139	426882:1	A	]7:131224307]A	18	PASS	EVDNC=ASSMB;HOMSEQ=ACCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=426882:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_131222001_131247001_28C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76
7	131224307	426882:2	A	A[7:131224139[	18	PASS	EVDNC=ASSMB;HOMSEQ=ACCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=426882:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_131222001_131247001_28C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76
7	133151419	427472:1	T	T[7:133151590[	8	PASS	EVDNC=ASSMB;INSERTION=CAGGGCCACA;MAPQ=60;MATEID=427472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_133133001_133158001_28C;SPAN=171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:19:8:8,0,37.7:4:0:-7.863:9.094
7	133151590	427472:2	G	]7:133151419]G	8	PASS	EVDNC=ASSMB;INSERTION=CAGGGCCACA;MAPQ=60;MATEID=427472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_133133001_133158001_28C;SPAN=171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:19:8:8,0,37.7:4:0:-7.863:9.094
7	133422936	427543:1	A	A[7:133423251[	22	PASS	EVDNC=ASSMB;HOMSEQ=AATAGAATTAATGGAGCA;MAPQ=60;MATEID=427543:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_133402501_133427501_32C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
7	133423251	427543:2	A	]7:133422936]A	22	PASS	EVDNC=ASSMB;HOMSEQ=AATAGAATTAATGGAGCA;MAPQ=60;MATEID=427543:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_133402501_133427501_32C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
7	133435161	427546:1	A	A[8:103863624[	42	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=427546:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_133427001_133452001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91
7	134739891	427922:1	C	[9:108352880[C	26	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TAAAATTATG;MAPQ=60;MATEID=427922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_134725501_134750501_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:8:2:-26.41:26.41
7	137149719	428770:1	T	T[7:137150005[	52	PASS	EVDNC=ASSMB;HOMSEQ=GACAAAGGACAATTCTT;MAPQ=60;MATEID=428770:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_137126501_137151501_31C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81
7	137150005	428770:2	G	]7:137149719]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GACAAAGGACAATTCTT;MAPQ=60;MATEID=428770:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_137126501_137151501_31C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81
7	137638467	428909:1	T	]7:137638575]T	31	PASS	EVDNC=ASSMB;HOMSEQ=TATATATGTGTGTATATATATACACACATATAT;MAPQ=60;MATEID=428909:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_7_137616501_137641501_8C;SECONDARY;SPAN=108;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
7	137638575	428909:2	T	T[7:137638467[	31	PASS	EVDNC=ASSMB;HOMSEQ=TATATATGTGTGTATATATATACACACATATAT;MAPQ=60;MATEID=428909:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_7_137616501_137641501_8C;SECONDARY;SPAN=108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
7	138615526	429186:1	A	A[7:138615753[	46	PASS	EVDNC=ASSMB;HOMSEQ=CCACTGCACTCCA;MAPQ=60;MATEID=429186:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_138596501_138621501_46C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21
7	138615753	429186:2	C	]7:138615526]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CCACTGCACTCCA;MAPQ=60;MATEID=429186:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_138596501_138621501_46C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21
7	139057536	429380:1	T	T[7:139057840[	66	PASS	EVDNC=ASSMB;HOMSEQ=AACAATTACATTTT;MAPQ=60;MATEID=429380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_139037501_139062501_16C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:22:6:66,6,0:20:0:-64.93:64.93
7	139057840	429380:2	A	]7:139057536]A	66	PASS	EVDNC=ASSMB;HOMSEQ=AACAATTACATTTT;MAPQ=60;MATEID=429380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_139037501_139062501_16C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:22:6:66,6,0:20:0:-64.93:64.93
7	141414080	429954:1	T	T[7:141414383[	52	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAAACATCATTTTT;MAPQ=60;MATEID=429954:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_141414001_141439001_66C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:20:2.1:52.8,2.1,0:17:0:-53.67:53.67
7	141414383	429954:2	C	]7:141414080]C	52	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAAACATCATTTTT;MAPQ=60;MATEID=429954:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_141414001_141439001_66C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:20:2.1:52.8,2.1,0:17:0:-53.67:53.67
7	142060063	430145:1	T	]7:142086470]T	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=430145:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060063(-)-7:142086470(+)__7_142075501_142100501D;SPAN=26407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	142060773	430146:1	A	A[7:142087080[	26	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=430146:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060773(+)-7:142087080(-)__7_142075501_142100501D;SPAN=26307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
7	142086470	430145:2	G	G[7:142060063[	42	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=430145:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060063(-)-7:142086470(+)__7_142075501_142100501D;SPAN=26407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	142087080	430146:2	T	]7:142060773]T	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=430146:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060773(+)-7:142087080(-)__7_142075501_142100501D;SPAN=26307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
7	142578304	430476:1	A	A[7:142617917[	26	PASS	EVDNC=ASSMB;INSERTION=CCGCC;MAPQ=60;MATEID=430476:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_142614501_142639501_55C;SPAN=39613;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29
7	142617917	430476:2	A	]7:142578304]A	26	PASS	EVDNC=ASSMB;INSERTION=CCGCC;MAPQ=60;MATEID=430476:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_142614501_142639501_55C;SPAN=39613;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29
7	144800296	431053:1	A	A]7:144860189]	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=431053:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:144800296(+)-7:144860189(+)__7_144844001_144869001D;SPAN=59893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
7	144860189	431053:2	G	G]7:144800296]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=431053:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:144800296(+)-7:144860189(+)__7_144844001_144869001D;SPAN=59893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
7	146423113	431501:1	T	T[7:146423454[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGA;MAPQ=60;MATEID=431501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_3C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:9:6:-35.04:35.04
7	146423113	431502:1	T	T[7:146423476[	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGATTTTAGAAGTGTGAAAAAAAAA;MAPQ=60;MATEID=431502:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_14C;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:4:6:-17.13:18.75
7	146423454	431501:2	T	]7:146423113]T	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGA;MAPQ=60;MATEID=431501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_3C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:9:6:-35.04:35.04
7	146423476	431502:2	A	]7:146423113]A	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGATTTTAGAAGTGTGAAAAAAAAA;MAPQ=60;MATEID=431502:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_14C;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:4:6:-17.13:18.75
7	146650871	431567:1	A	]7:146657869]A	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACA;MAPQ=60;MATEID=431567:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_146657001_146682001_164C;SPAN=6998;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:9:5:-34.32:34.32
7	146657869	431567:2	A	A[7:146650871[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACA;MAPQ=60;MATEID=431567:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_146657001_146682001_164C;SPAN=6998;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:9:5:-34.32:34.32
7	147118431	431713:1	A	]7:147118535]A	64	PASS	EVDNC=ASSMB;HOMSEQ=ACTTT;MAPQ=60;MATEID=431713:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_147098001_147123001_44C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:53:64.4:64.4,0,67.7:24:0:-64.33:64.34
7	147118535	431713:2	T	T[7:147118431[	64	PASS	EVDNC=ASSMB;HOMSEQ=ACTTT;MAPQ=60;MATEID=431713:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_147098001_147123001_44C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:53:64.4:64.4,0,67.7:24:0:-64.33:64.34
7	147979998	432064:1	C	C[7:147981158[	26	PASS	EVDNC=ASSMB;HOMSEQ=AGC;MAPQ=60;MATEID=432064:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_147980001_148005001_24C;SPAN=1160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83
7	147981158	432064:2	A	]7:147979998]A	26	PASS	EVDNC=ASSMB;HOMSEQ=AGC;MAPQ=60;MATEID=432064:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_147980001_148005001_24C;SPAN=1160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83
7	148375877	432209:1	T	T[7:148379231[	59	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=432209:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:148375877(+)-7:148379231(-)__7_148372001_148397001D;SPAN=3354;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	148379231	432209:2	T	]7:148375877]T	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=432209:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:148375877(+)-7:148379231(-)__7_148372001_148397001D;SPAN=3354;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	149121088	432449:1	T	T[7:149121402[	74	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=432449:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_149107001_149132001_6C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:30:1.4:74,0,1.4:20:8:-78.37:78.37
7	149121402	432449:2	T	]7:149121088]T	74	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=432449:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_149107001_149132001_6C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:30:1.4:74,0,1.4:20:8:-78.37:78.37
7	151346416	433173:1	T	T[7:151349025[	16	PASS	EVDNC=ASSMB;HOMSEQ=CCTTT;MAPQ=60;MATEID=433173:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_151336501_151361501_4C;SPAN=2609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22
7	151349025	433173:2	C	]7:151346416]C	16	PASS	EVDNC=ASSMB;HOMSEQ=CCTTT;MAPQ=60;MATEID=433173:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_151336501_151361501_4C;SPAN=2609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22
7	152548284	433615:1	C	C[7:152549219[	72	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=433615:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_152537001_152562001_60C;SPAN=935;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:14:6.6:72.6,6.6,0:24:0:-72.62:72.62
7	152549219	433615:2	C	]7:152548284]C	72	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=433615:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_152537001_152562001_60C;SPAN=935;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:14:6.6:72.6,6.6,0:24:0:-72.62:72.62
7	152555315	433617:1	T	]7:152557061]T	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCAA;MAPQ=60;MATEID=433617:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_152537001_152562001_37C;SPAN=1746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:6:3:-18.82:19.57
7	152557061	433617:2	A	A[7:152555315[	18	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCAA;MAPQ=60;MATEID=433617:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_152537001_152562001_37C;SPAN=1746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:6:3:-18.82:19.57
7	152584618	433637:1	A	A[7:152587221[	56	PASS	EVDNC=ASSMB;HOMSEQ=CACATGTTTTA;MAPQ=60;MATEID=433637:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152586001_152611001_2C;SPAN=2603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
7	152587221	433637:2	C	]7:152584618]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CACATGTTTTA;MAPQ=60;MATEID=433637:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152586001_152611001_2C;SPAN=2603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
7	152722328	433703:1	T	T[7:152722631[	46	PASS	EVDNC=ASSMB;HOMSEQ=GGATCACTACTTTT;MAPQ=60;MATEID=433703:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152708501_152733501_91C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02
7	152722631	433703:2	G	]7:152722328]G	46	PASS	EVDNC=ASSMB;HOMSEQ=GGATCACTACTTTT;MAPQ=60;MATEID=433703:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152708501_152733501_91C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02
7	153011383	433769:1	A	A[7:153011761[	28	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=433769:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_153002501_153027501_39C;SPAN=378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
7	153011761	433769:2	T	]7:153011383]T	28	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=433769:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_153002501_153027501_39C;SPAN=378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
7	153613053	434011:1	C	C[7:153613733[	75	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTATAAC;MAPQ=60;MATEID=434011:2;MATENM=2;NM=9;NUMPARTS=2;SCTG=c_7_153590501_153615501_41C;SPAN=680;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92
7	153613733	434011:2	A	]7:153613053]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTATAAC;MAPQ=60;MATEID=434011:1;MATENM=9;NM=2;NUMPARTS=2;SCTG=c_7_153590501_153615501_41C;SPAN=680;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92
7	154456858	434314:1	T	T[7:154457985[	62	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=434314:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:154456858(+)-7:154457985(-)__7_154448001_154473001D;SPAN=1127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72
7	154457985	434314:2	A	]7:154456858]A	62	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=434314:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:154456858(+)-7:154457985(-)__7_154448001_154473001D;SPAN=1127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72
7	154600273	434395:1	A	A[7:154608021[	72	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CCAGGCTGGAGTACAGTGGCACAATCTCAGCTCACTGCAAGCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=434395:2;MATENM=18;NM=6;NUMPARTS=2;SCTG=c_7_154595001_154620001_21C;SPAN=7748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:3:6.6:72.6,6.6,0:6:22:-72.62:72.62
7	154608021	434395:2	C	]7:154600273]C	72	PASS	DISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=CCAGGCTGGAGTACAGTGGCACAATCTCAGCTCACTGCAAGCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=434395:1;MATENM=6;NM=18;NUMPARTS=2;SCTG=c_7_154595001_154620001_21C;SPAN=7748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:3:6.6:72.6,6.6,0:6:22:-72.62:72.62
7	155084843	434580:1	C	]7:155088917]C	46	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=434580:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_155085001_155110001_4C;SPAN=4074;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	155085280	434583:1	G	G[7:155088918[	50	PASS	EVDNC=ASSMB;INSERTION=CTTAT;MAPQ=60;MATEID=434583:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_155085001_155110001_15C;SPAN=3638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98
7	155088917	434580:2	C	C[7:155084843[	46	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=434580:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_155085001_155110001_4C;SPAN=4074;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	155088918	434583:2	T	]7:155085280]T	50	PASS	EVDNC=ASSMB;INSERTION=CTTAT;MAPQ=60;MATEID=434583:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_155085001_155110001_15C;SPAN=3638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98
7	155150222	434599:1	A	A[7:155150535[	42	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAGTGGGTGCAA;MAPQ=60;MATEID=434599:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_155134001_155159001_115C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
7	155150535	434599:2	A	]7:155150222]A	42	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAGTGGGTGCAA;MAPQ=60;MATEID=434599:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_155134001_155159001_115C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
7	155891399	435004:1	A	]Un_JTFH01000557v1_decoy:1459]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AGGTGGTGGTGGC;MAPQ=60;MATEID=435004:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_155869001_155894001_89C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08
7	155932667	435025:1	G	G[7:155932869[	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGTGTG;MAPQ=60;MATEID=435025:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_155918001_155943001_73C;SPAN=202;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:12:6:-50.74:50.74
7	155932869	435025:2	A	]7:155932667]A	49	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=ATGTGTG;MAPQ=60;MATEID=435025:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_155918001_155943001_73C;SPAN=202;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:12:6:-50.74:50.74
7	156957886	435424:1	T	]7:156959338]T	59	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=435424:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_156947001_156972001_74C;SPAN=1452;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:25:2.9:59,0,2.9:13:13:-61.85:61.85
7	156958050	435425:1	C	C[7:156959338[	30	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=435425:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_156947001_156972001_77C;SPAN=1288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
7	156959338	435424:2	G	G[7:156957886[	59	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=435424:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_156947001_156972001_74C;SPAN=1452;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:25:2.9:59,0,2.9:13:13:-61.85:61.85
7	156959338	435425:2	G	]7:156958050]G	30	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=435425:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_156947001_156972001_77C;SPAN=1288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
7	158410836	436263:1	T	]7:158410940]T	35	PASS	EVDNC=ASSMB;HOMSEQ=TGGGAGGCCCC;MAPQ=60;MATEID=436263:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_158392501_158417501_21C;SPAN=104;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
7	158410940	436263:2	C	C[7:158410836[	35	PASS	EVDNC=ASSMB;HOMSEQ=TGGGAGGCCCC;MAPQ=60;MATEID=436263:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_158392501_158417501_21C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
7	158454926	436501:1	G	]7:158848272]G	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=436501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_158833501_158858501_32C;SPAN=393346;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07
7	158848272	436501:2	C	C[7:158454926[	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=436501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_158833501_158858501_32C;SPAN=393346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07
8	245406	485861:1	G	]9:11384325]G	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=485861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_11368001_11393001_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:4:6:-24.99:24.99
8	644397	436892:1	G	G[8:649415[	52	PASS	EVDNC=ASSMB;INSERTION=CAA;MAPQ=60;MATEID=436892:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_637001_662001_88C;SPAN=5018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:9:4.8:52.8,4.8,0:18:0:-52.81:52.81
8	649415	436892:2	G	]8:644397]G	52	PASS	EVDNC=ASSMB;INSERTION=CAA;MAPQ=60;MATEID=436892:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_637001_662001_88C;SPAN=5018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:9:4.8:52.8,4.8,0:18:0:-52.81:52.81
8	1724902	13008:2	A	[1:53954234[A	26	PASS	DISC_MAPQ=44;EVDNC=TSI_L;HOMSEQ=A;INSERTION=AGCCCAGAGACAGAGCTTTCAAGGTGCCTGCTCAGTTTATGAGCCAAGTTTCTATTCTTTTCTGCATGTGTTT;MAPQ=60;MATEID=13008:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_53949001_53974001_174C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:93:26.9:26.9,0,205.1:16:3:-26.67:34.81
8	2085602	437510:1	C	C[8:2086130[	62	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CACTGTCGTGATCTCCGCGTGGCCCCCCACTGTTGTGATCTCTGCGTGGCCCCACTGTCGTGATCTCTGCGTGGCCCCACTGTTGTGATCTTTGCGTGGCCCCACTGTC;MAPQ=60;MATEID=437510:2;MATENM=31;NM=4;NUMPARTS=3;SCTG=c_8_2082501_2107501_114C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:4:5.7:62.7,5.7,0:3:18:-62.72:62.72
8	2086130	437510:2	C	]8:2085602]C	62	PASS	DISC_MAPQ=16;EVDNC=TSI_L;HOMSEQ=CACTGTCGTGATCTCCGCGTGGCCCCCCACTGTTGTGATCTCTGCGTGGCCCCACTGTCGTGATCTCTGCGTGGCCCCACTGTTGTGATCTTTGCGTGGCCCCACTGTC;MAPQ=60;MATEID=437510:1;MATENM=4;NM=31;NUMPARTS=3;SCTG=c_8_2082501_2107501_114C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:4:5.7:62.7,5.7,0:3:18:-62.72:62.72
8	3115324	437859:1	C	]8:3153710]C	17	PASS	EVDNC=ASSMB;HOMSEQ=CCCAGG;MAPQ=60;MATEID=437859:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_3136001_3161001_36C;SPAN=38386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56
8	3153710	437859:2	G	G[8:3115324[	17	PASS	EVDNC=ASSMB;HOMSEQ=CCCAGG;MAPQ=60;MATEID=437859:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_3136001_3161001_36C;SPAN=38386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56
8	3926369	438321:1	C	C[8:3927626[	44	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=438321:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_3920001_3945001_99C;SPAN=1257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:15:0:-45.49:45.49
8	3927626	438321:2	C	]8:3926369]C	44	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=438321:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_3920001_3945001_99C;SPAN=1257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:15:0:-45.49:45.49
8	4137359	438395:1	T	T[8:4137824[	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATGTCAC;MAPQ=60;MATEID=438395:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_8_4116001_4141001_71C;SPAN=465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:12:6:-45.49:45.49
8	4137824	438395:2	A	]8:4137359]A	44	PASS	DISC_MAPQ=48;EVDNC=ASDIS;INSERTION=ATGTCAC;MAPQ=60;MATEID=438395:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_8_4116001_4141001_71C;SPAN=465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:12:6:-45.49:45.49
8	4265362	438458:1	T	T[8:4267451[	31	PASS	EVDNC=ASSMB;INSERTION=TACATAATAATAT;MAPQ=60;MATEID=438458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_4263001_4288001_41C;SPAN=2089;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31
8	4267451	438458:2	A	]8:4265362]A	31	PASS	EVDNC=ASSMB;INSERTION=TACATAATAATAT;MAPQ=60;MATEID=438458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_4263001_4288001_41C;SPAN=2089;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31
8	4686301	438597:1	T	T[8:4686729[	49	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=438597:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_4679501_4704501_79C;SPAN=428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
8	4686729	438597:2	C	]8:4686301]C	49	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=438597:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_4679501_4704501_79C;SPAN=428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
8	5083713	438785:1	A	A[8:5083999[	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGATGGAAGTA;MAPQ=60;MATEID=438785:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_5071501_5096501_19C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
8	5083999	438785:2	A	]8:5083713]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGATGGAAGTA;MAPQ=60;MATEID=438785:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_5071501_5096501_19C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
8	5737994	439044:1	C	C[8:5748258[	21	PASS	EVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=439044:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_8_5733001_5758001_8C;SPAN=10264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4
8	5748258	439044:2	T	]8:5737994]T	21	PASS	EVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=439044:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_8_5733001_5758001_8C;SPAN=10264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4
8	5890665	439087:1	A	A[8:5890984[	38	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGGAGA;MAPQ=60;MATEID=439087:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_5880001_5905001_64C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
8	5890984	439087:2	A	]8:5890665]A	38	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGGAGA;MAPQ=60;MATEID=439087:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_5880001_5905001_64C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
8	6678940	439496:2	A	[1:59491056[A	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA;MAPQ=60;MATEID=439496:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_6664001_6689001_35C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91
8	6933349	439600:1	A	A[8:6933672[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGCTTAGGAAAAACAGTG;MAPQ=60;MATEID=439600:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_6933501_6958501_69C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:7:9:99,9,0:24:12:-99.02:99.02
8	6933672	439600:2	C	]8:6933349]C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGCTTAGGAAAAACAGTG;MAPQ=60;MATEID=439600:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_6933501_6958501_69C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:7:9:99,9,0:24:12:-99.02:99.02
8	7134147	439657:1	G	G[8:7137881[	52	PASS	EVDNC=ASSMB;HOMSEQ=TGCCTGG;MAPQ=59;MATEID=439657:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_7129501_7154501_89C;SPAN=3734;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81
8	7137881	439657:2	T	]8:7134147]T	52	PASS	EVDNC=ASSMB;HOMSEQ=TGCCTGG;MAPQ=60;MATEID=439657:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_7129501_7154501_89C;SPAN=3734;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81
8	11388052	441018:1	G	G[8:11389699[	72	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=441018:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_11368001_11393001_58C;SPAN=1647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62
8	11389699	441018:2	A	]8:11388052]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=441018:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_11368001_11393001_58C;SPAN=1647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62
8	11930717	441301:1	A	]8:12035858]A	69	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=441301:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:11930717(-)-8:12035858(+)__8_12029501_12054501D;SPAN=105141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:14:6.3:69.3,6.3,0:0:23:-69.32:69.32
8	12035858	441301:2	T	T[8:11930717[	69	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=441301:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:11930717(-)-8:12035858(+)__8_12029501_12054501D;SPAN=105141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:14:6.3:69.3,6.3,0:0:23:-69.32:69.32
8	12570090	441563:1	A	]8:12628231]A	26	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=441563:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570090(-)-8:12628231(+)__8_12568501_12593501D;SPAN=58141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
8	12570404	441566:1	A	A[8:12575326[	39	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=441566:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570404(+)-8:12575326(-)__8_12568501_12593501D;SPAN=4922;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:61:39.2:39.2,0,111.8:0:17:-38.97:41.04
8	12575326	441566:2	T	]8:12570404]T	39	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=441566:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570404(+)-8:12575326(-)__8_12568501_12593501D;SPAN=4922;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:61:39.2:39.2,0,111.8:0:17:-38.97:41.04
8	12628231	441563:2	T	T[8:12570090[	26	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=441563:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570090(-)-8:12628231(+)__8_12568501_12593501D;SPAN=58141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
8	13312080	441914:1	G	G[8:13312384[	2	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATAATTTCTTTAG;MAPQ=60;MATEID=441914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_13303501_13328501_75C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:51:2.3:2.3,0,124.4:5:0:-2.169:9.566
8	13312384	441914:2	A	]8:13312080]A	2	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATAATTTCTTTAG;MAPQ=60;MATEID=441914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_13303501_13328501_75C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:51:2.3:2.3,0,124.4:5:0:-2.169:9.566
8	14101377	442359:1	G	]8:14101564]G	35	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=442359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_14087501_14112501_40C;SPAN=187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
8	14101564	442359:2	G	G[8:14101377[	35	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=442359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_14087501_14112501_40C;SPAN=187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
8	15143770	442750:1	T	T[8:15144078[	92	PASS	EVDNC=ASSMB;HOMSEQ=CTATTATTACCTT;MAPQ=60;MATEID=442750:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_8_15141001_15166001_10C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:20:8.4:92.4,8.4,0:31:0:-92.42:92.42
8	15144078	442750:2	C	]8:15143770]C	92	PASS	EVDNC=ASSMB;HOMSEQ=CTATTATTACCTT;MAPQ=60;MATEID=442750:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_8_15141001_15166001_10C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:20:8.4:92.4,8.4,0:31:0:-92.42:92.42
8	15965406	443106:1	G	G[8:15979503[	46	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=443106:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_15974001_15999001_23C;SPAN=14097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21
8	15979503	443106:2	A	]8:15965406]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=443106:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_15974001_15999001_23C;SPAN=14097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21
8	16176924	443194:1	G	]8:16188715]G	23	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=443194:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:16176924(-)-8:16188715(+)__8_16170001_16195001D;SPAN=11791;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:35:23.3:23.3,0,62.9:0:10:-23.17:24.27
8	16188715	443194:2	C	C[8:16176924[	23	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=443194:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:16176924(-)-8:16188715(+)__8_16170001_16195001D;SPAN=11791;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:35:23.3:23.3,0,62.9:0:10:-23.17:24.27
8	16297189	443263:1	T	]8:16297276]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TTACATTTAAATGT;MAPQ=56;MATEID=443263:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16292501_16317501_11C;SPAN=87;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:42:41:41,0,64.1:16:0:-41.01:41.3
8	16297276	443263:2	T	T[8:16297189[	41	PASS	EVDNC=ASSMB;HOMSEQ=TTACATTTAAATGT;MAPQ=60;MATEID=443263:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16292501_16317501_11C;SPAN=87;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:42:41:41,0,64.1:16:0:-41.01:41.3
8	16964371	443510:1	G	G[8:16964741[	59	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=443510:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16954001_16979001_86C;SPAN=370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
8	16964741	443510:2	G	]8:16964371]G	59	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=443510:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16954001_16979001_86C;SPAN=370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
8	17104713	443545:1	C	C[8:17105020[	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTCCAGATATC;MAPQ=60;MATEID=443545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17101001_17126001_12C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
8	17105020	443545:2	A	]8:17104713]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTCCAGATATC;MAPQ=60;MATEID=443545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17101001_17126001_12C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
8	17408106	443658:1	A	A[8:17408417[	66	PASS	EVDNC=ASSMB;HOMSEQ=AAGAACATCATGGA;MAPQ=60;MATEID=443658:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17395001_17420001_29C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:17:6:66,6,0:22:0:-66.02:66.02
8	17408417	443658:2	A	]8:17408106]A	66	PASS	EVDNC=ASSMB;HOMSEQ=AAGAACATCATGGA;MAPQ=60;MATEID=443658:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17395001_17420001_29C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:17:6:66,6,0:22:0:-66.02:66.02
8	18594144	444074:1	T	T[8:18594341[	9	PASS	EVDNC=ASSMB;HOMSEQ=ATATATATT;MAPQ=60;MATEID=444074:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_18571001_18596001_54C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:4:1:0.9:9.9,0.9,0:4:0:-9.903:9.903
8	18594341	444074:2	A	]8:18594144]A	9	PASS	EVDNC=ASSMB;HOMSEQ=ATATATATT;MAPQ=60;MATEID=444074:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_18571001_18596001_54C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:4:1:0.9:9.9,0.9,0:4:0:-9.903:9.903
8	18597110	444086:1	C	C[8:18598435[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGGATC;MAPQ=60;MATEID=444086:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_8_18595501_18620501_89C;SPAN=1325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:26:9.9:108.9,9.9,0:36:0:-108.9:108.9
8	18598435	444086:2	A	]8:18597110]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGGATC;MAPQ=60;MATEID=444086:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_8_18595501_18620501_89C;SPAN=1325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:26:9.9:108.9,9.9,0:36:0:-108.9:108.9
8	18793948	444132:1	C	C[8:18794916[	62	PASS	EVDNC=ASSMB;HOMSEQ=ATGAAGC;MAPQ=60;MATEID=444132:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_8_18791501_18816501_13C;SPAN=968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72
8	18794916	444132:2	A	]8:18793948]A	62	PASS	EVDNC=ASSMB;HOMSEQ=ATGAAGC;MAPQ=60;MATEID=444132:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_8_18791501_18816501_13C;SPAN=968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72
8	19865725	444480:1	A	]8:19865798]A	15	PASS	EVDNC=ASSMB;HOMSEQ=AGGAAGGAAAGAAA;MAPQ=60;MATEID=444480:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_19845001_19870001_47C;SPAN=73;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
8	19865798	444480:2	A	A[8:19865725[	15	PASS	EVDNC=ASSMB;HOMSEQ=AGGAAGGAAAGAAA;MAPQ=60;MATEID=444480:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_19845001_19870001_47C;SPAN=73;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
8	21085893	444758:1	C	C[8:21086296[	62	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=444758:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21070001_21095001_2C;SPAN=403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:20:5.7:62.7,5.7,0:21:0:-62.72:62.72
8	21086296	444758:2	C	]8:21085893]C	62	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=444758:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21070001_21095001_2C;SPAN=403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:20:5.7:62.7,5.7,0:21:0:-62.72:62.72
8	21517297	444821:1	C	[Un_JTFH01000350v1_decoy:1[C	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=444821:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21511001_21536001_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:18:6:66,6,0:22:0:-66.02:66.02
8	21517297	997407:1	C	[Un_JTFH01000350v1_decoy:1[C	69	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=997407:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_1193_1_1954_0C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:7:6.3:69.3,6.3,0:23:0:-69.32:69.32
8	21766795	1010911:1	A	]Un_JTFH01001939v1_decoy:2292]A	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=1010911:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2782_1_2292_4C;SPAN=-1;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:4:3.3:36.3,3.3,0:12:0:-36.31:36.31
8	21766797	1010912:1	A	A[Un_JTFH01001939v1_decoy:1[	62	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=1010912:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2782_1_2292_7C;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:6:5.7:62.7,5.7,0:21:0:-62.72:62.72
8	21766797	444889:1	A	A[Un_JTFH01001939v1_decoy:1[	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=444889:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_21756001_21781001_45C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:11:6:66,6,0:22:0:-66.02:66.02
8	22332116	445121:1	C	]8:22500234]C	38	PASS	DISC_MAPQ=53;EVDNC=ASDIS;MAPQ=60;MATEID=445121:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_22491001_22516001_10C;SPAN=168118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69
8	22500234	445121:2	T	T[8:22332116[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=445121:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_22491001_22516001_10C;SPAN=168118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69
8	25114919	445971:1	C	C[8:25133429[	72	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=445971:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25112501_25137501_73C;SPAN=18510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
8	25133429	445971:2	A	]8:25114919]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=445971:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25112501_25137501_73C;SPAN=18510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
8	25209169	446016:1	G	G[8:25213137[	36	PASS	EVDNC=ASSMB;HOMSEQ=GGCTCAG;MAPQ=60;MATEID=446016:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25210501_25235501_34C;SPAN=3968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:12:0:-36.31:36.31
8	25213137	446016:2	G	]8:25209169]G	36	PASS	EVDNC=ASSMB;HOMSEQ=GGCTCAG;MAPQ=60;MATEID=446016:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25210501_25235501_34C;SPAN=3968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:12:0:-36.31:36.31
8	25340917	446063:1	T	T[8:25341712[	18	PASS	EVDNC=ASSMB;HOMSEQ=AATT;MAPQ=60;MATEID=446063:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25333001_25358001_15C;SPAN=795;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27
8	25341712	446063:2	A	]8:25340917]A	18	PASS	EVDNC=ASSMB;HOMSEQ=AATT;MAPQ=60;MATEID=446063:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25333001_25358001_15C;SPAN=795;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27
8	28576446	817809:1	G	G[17:81799230[	36	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=817809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28576446(+)-17:81799230(-)__17_81781001_81806001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:2:3.3:36.3,3.3,0:0:12:-36.31:36.31
8	28650137	447158:1	A	]8:28712090]A	39	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=447158:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28650137(-)-8:28712090(+)__8_28689501_28714501D;SPAN=61953;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
8	28712090	447158:2	G	G[8:28650137[	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=447158:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28650137(-)-8:28712090(+)__8_28689501_28714501D;SPAN=61953;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
8	29980022	447488:1	A	A[8:29980770[	32	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=447488:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_29963501_29988501_45C;SPAN=748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
8	29980770	447488:2	A	]8:29980022]A	32	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=447488:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_29963501_29988501_45C;SPAN=748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
8	32822491	448497:1	G	G[8:32833744[	59	PASS	EVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=448497:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_8_32805501_32830501_21C;SPAN=11253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41
8	32833744	448497:2	C	]8:32822491]C	59	PASS	EVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=448497:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_8_32805501_32830501_21C;SPAN=11253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41
8	35555406	449149:1	A	A[12:52358976[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=449149:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:35555406(+)-12:52358976(-)__8_35549501_35574501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
8	35961094	449181:1	T	]8:35972220]T	29	PASS	DISC_MAPQ=51;EVDNC=ASDIS;INSERTION=ATGATTC;MAPQ=60;MATEID=449181:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_35966001_35991001_0C;SPAN=11126;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:4:7:-29.71:29.71
8	35972220	449181:2	A	A[8:35961094[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATGATTC;MAPQ=60;MATEID=449181:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_35966001_35991001_0C;SPAN=11126;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:4:7:-29.71:29.71
8	37645401	449440:1	G	]Un_JTFH01000913v1_decoy:1045]G	56	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=449440:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_37632001_37657001_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11
8	39096102	449794:1	A	A[8:39096363[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=449794:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_39077501_39102501_30C;SPAN=261;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:10:4:-42.91:42.91
8	39096363	449794:2	T	]8:39096102]T	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=449794:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_39077501_39102501_30C;SPAN=261;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:10:4:-42.91:42.91
8	39907811	450065:1	A	A[8:39908128[	27	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATAATATTTAA;MAPQ=60;MATEID=450065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_39886001_39911001_16C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
8	39908128	450065:2	A	]8:39907811]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATAATATTTAA;MAPQ=60;MATEID=450065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_39886001_39911001_16C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
8	40279424	450329:1	T	]8:40531710]T	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=450329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_40523001_40548001_104C;SPAN=252286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:8:8:-36.31:36.31
8	40432188	450269:1	A	A[8:40438679[	46	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAATACACAGGA;MAPQ=60;MATEID=450269:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_8_40425001_40450001_119C;SPAN=6491;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21
8	40438679	450269:2	A	]8:40432188]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAATACACAGGA;MAPQ=60;MATEID=450269:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_8_40425001_40450001_119C;SPAN=6491;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21
8	40531710	450329:2	G	G[8:40279424[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=450329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_40523001_40548001_104C;SPAN=252286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:8:8:-36.31:36.31
8	42332967	450872:1	C	C[8:42336835[	66	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCATTGCACTCC;MAPQ=60;MATEID=450872:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_8_42336001_42361001_31C;SPAN=3868;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:1:6:66,6,0:9:14:-66.02:66.02
8	42336835	450872:2	C	]8:42332967]C	66	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCATTGCACTCC;MAPQ=60;MATEID=450872:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_8_42336001_42361001_31C;SPAN=3868;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:1:6:66,6,0:9:14:-66.02:66.02
8	43588080	734367:1	C	[15:62731836[C	49	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=734367:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62720001_62745001_57C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:11:8:-50.34:50.34
8	43776203	451387:1	T	]8:43780756]T	44	PASS	EVDNC=ASSMB;HOMSEQ=TTCTTTGGATTCAGCAGATTGGAAACACTCTTT;MAPQ=60;MATEID=451387:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_43757001_43782001_13C;SPAN=4553;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85
8	43780756	451387:2	T	T[8:43776203[	44	PASS	EVDNC=ASSMB;HOMSEQ=TTCTTTGGATTCAGCAGATTGGAAACACTCTTT;MAPQ=60;MATEID=451387:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_43757001_43782001_13C;SPAN=4553;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85
8	46080001	451746:1	T	T[8:46080812[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTTTTGATTCAACAGGTTGGAAACACTTTTTTTGTAGAAT;MAPQ=60;MATEID=451746:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46060001_46085001_11C;SPAN=811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:8:6:-38:38
8	46080812	451746:2	T	]8:46080001]T	36	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TTCTTTTGATTCAACAGGTTGGAAACACTTTTTTTGTAGAAT;MAPQ=60;MATEID=451746:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46060001_46085001_11C;SPAN=811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:8:6:-38:38
8	46469698	451798:1	T	T[8:46470019[	55	PASS	EVDNC=ASSMB;HOMSEQ=CTTTCTAGCTTTT;MAPQ=60;MATEID=451798:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46452001_46477001_68C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:25:6.2:55.7,0,6.2:19:0:-57.84:57.84
8	46470019	451798:2	C	]8:46469698]C	55	PASS	EVDNC=ASSMB;HOMSEQ=CTTTCTAGCTTTT;MAPQ=60;MATEID=451798:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46452001_46477001_68C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:25:6.2:55.7,0,6.2:19:0:-57.84:57.84
8	46494290	451803:1	A	A[8:46496276[	29	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=451803:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:46494290(+)-8:46496276(-)__8_46476501_46501501D;SPAN=1986;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71
8	46496276	451803:2	A	]8:46494290]A	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=451803:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:46494290(+)-8:46496276(-)__8_46476501_46501501D;SPAN=1986;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71
8	48174013	999226:1	T	T[Un_JTFH01000836v1_decoy:1[	49	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=999226:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1679_1_1109_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51
8	48174013	452062:1	T	T[Un_JTFH01000836v1_decoy:1[	55	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=452062:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_48167001_48192001_57C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:27:12.2:55.1,0,12.2:19:0:-56.6:56.6
8	48180826	452065:1	G	G[8:48181419[	28	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=452065:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_48167001_48192001_123C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
8	48181419	452065:2	G	]8:48180826]G	28	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=452065:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_48167001_48192001_123C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
8	49713404	987218:1	T	T[Un_KN707628v1_decoy:1[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=987218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_479_1_2960_3C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:4:4.2:46.2,4.2,0:15:0:-46.21:46.21
8	50118594	452481:1	C	C[8:50125769[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452481:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:50118594(+)-8:50125769(-)__8_50102501_50127501D;SPAN=7175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:2:4.2:46.2,4.2,0:0:16:-46.21:46.21
8	50125769	452481:2	T	]8:50118594]T	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452481:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:50118594(+)-8:50125769(-)__8_50102501_50127501D;SPAN=7175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:2:4.2:46.2,4.2,0:0:16:-46.21:46.21
8	50839986	452617:1	A	A[8:50840180[	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=452617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_50837501_50862501_21C;SPAN=194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19
8	50840180	452617:2	A	]8:50839986]A	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=452617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_50837501_50862501_21C;SPAN=194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19
8	51817582	452806:1	C	]11:38791187]C	49	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=452806:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51817582(-)-11:38791187(+)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:13:4.5:49.5,4.5,0:0:17:-49.51:49.51
8	51819021	452809:1	A	A[11:38791106[	82	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=452809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51819021(+)-11:38791106(-)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52
8	59222847	454429:1	T	]8:59224226]T	49	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=454429:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:59222847(-)-8:59224226(+)__8_59216501_59241501D;SPAN=1379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
8	59224226	454429:2	A	A[8:59222847[	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=454429:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:59222847(-)-8:59224226(+)__8_59216501_59241501D;SPAN=1379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
8	62017592	454978:1	T	T[8:62017897[	36	PASS	EVDNC=ASSMB;HOMSEQ=ATATTCTT;MAPQ=60;MATEID=454978:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_8_62009501_62034501_28C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31
8	62017897	454978:2	A	]8:62017592]A	36	PASS	EVDNC=ASSMB;HOMSEQ=ATATTCTT;MAPQ=60;MATEID=454978:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_8_62009501_62034501_28C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31
8	62346646	455114:1	G	G[8:62350676[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAG;MAPQ=60;MATEID=455114:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_62328001_62353001_14C;SPAN=4030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:9:9:-42.91:42.91
8	62350676	455114:2	T	]8:62346646]T	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAG;MAPQ=60;MATEID=455114:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_62328001_62353001_14C;SPAN=4030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:9:9:-42.91:42.91
8	63059041	504759:1	T	]9:90432262]T	25	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TTTTTTTTTGAGACGG;INSERTION=TTTTTTGTTGTTGTTG;MAPQ=60;MATEID=504759:2;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_9_90429501_90454501_9C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46
8	67227171	456003:1	C	]8:67247201]C	47	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=456003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_67228001_67253001_3C;SPAN=20030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
8	67247201	456003:2	T	T[8:67227171[	47	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=456003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_67228001_67253001_3C;SPAN=20030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
8	70380126	456829:1	A	]8:70404842]A	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=456829:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_70388501_70413501_9C;SPAN=24716;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:10:7:-39.28:39.28
8	70404842	456829:2	A	A[8:70380126[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=456829:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_70388501_70413501_9C;SPAN=24716;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:10:7:-39.28:39.28
8	70671447	456910:1	A	A[8:70672408[	92	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=456910:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:70671447(+)-8:70672408(-)__8_70658001_70683001D;SPAN=961;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:16:8.4:92.4,8.4,0:0:31:-92.42:92.42
8	70672408	456910:2	T	]8:70671447]T	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=456910:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:70671447(+)-8:70672408(-)__8_70658001_70683001D;SPAN=961;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:16:8.4:92.4,8.4,0:0:31:-92.42:92.42
8	71639183	457174:1	C	C[8:71639505[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTTTCACTATATC;MAPQ=60;MATEID=457174:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_71638001_71663001_110C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:5:5:-26.83:26.83
8	71639505	457174:2	G	]8:71639183]G	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTTTCACTATATC;MAPQ=60;MATEID=457174:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_71638001_71663001_110C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:5:5:-26.83:26.83
8	72488218	457496:1	A	]8:72492038]A	31	PASS	EVDNC=ASSMB;INSERTION=AGG;MAPQ=60;MATEID=457496:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72471001_72496001_0C;SPAN=3820;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
8	72492038	457496:2	T	T[8:72488218[	31	PASS	EVDNC=ASSMB;INSERTION=AGG;MAPQ=60;MATEID=457496:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72471001_72496001_0C;SPAN=3820;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
8	72874467	164465:2	A	A]3:62586884]	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=164465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62573001_62598001_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:89:5.1:0,5.1,234.3:4:3:5.211:10.46
8	72875540	457568:1	T	T[8:72881589[	15	PASS	EVDNC=ASSMB;HOMSEQ=TGCAAATCTT;MAPQ=60;MATEID=457568:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72863001_72888001_19C;SPAN=6049;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78
8	72881589	457568:2	T	]8:72875540]T	15	PASS	EVDNC=ASSMB;HOMSEQ=TGCAAATCTT;MAPQ=60;MATEID=457568:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72863001_72888001_19C;SPAN=6049;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78
8	74964713	458158:1	T	T[8:74965030[	40	PASS	EVDNC=ASSMB;HOMSEQ=TCTGTTTCTT;MAPQ=60;MATEID=458158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_74945501_74970501_88C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
8	74965030	458158:2	T	]8:74964713]T	40	PASS	EVDNC=ASSMB;HOMSEQ=TCTGTTTCTT;MAPQ=60;MATEID=458158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_74945501_74970501_88C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
8	78551616	469227:1	A	[8:109495685[A	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=469227:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_42C;SPAN=30944069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:38:35.6:58.7,0,35.6:14:12:-58.9:58.9
8	78595007	459008:2	T	T[4:124019638[	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=459008:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_78571501_78596501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:12:8:-48.04:48.04
8	84953160	460774:1	T	T]8:84961920]	24	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=460774:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:84953160(+)-8:84961920(+)__8_84941501_84966501D;SPAN=8760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74
8	84961920	460774:2	G	G]8:84953160]	24	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=460774:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:84953160(+)-8:84961920(+)__8_84941501_84966501D;SPAN=8760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74
8	85317928	460828:1	C	[8:85379024[C	72	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=460828:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_85358001_85383001_30C;SPAN=61096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:17:12:-72.62:72.62
8	85318987	460830:1	T	T[8:85377715[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=460830:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:85318987(+)-8:85377715(-)__8_85358001_85383001D;SPAN=58728;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
8	85377715	460830:2	A	]8:85318987]A	26	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=460830:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:85318987(+)-8:85377715(-)__8_85358001_85383001D;SPAN=58728;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
8	85379024	460828:2	T	[8:85317928[T	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=460828:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_85358001_85383001_30C;SPAN=61096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:17:12:-72.62:72.62
8	86399769	461134:2	T	T[7:94467518[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=461134:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_86387001_86412001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:11:11:-37.05:37.05
8	88379989	461722:1	T	T[8:88380286[	85	PASS	EVDNC=ASSMB;HOMSEQ=CAATTTTTTTT;MAPQ=60;MATEID=461722:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_88371501_88396501_9C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
8	88380286	461722:2	C	]8:88379989]C	85	PASS	EVDNC=ASSMB;HOMSEQ=CAATTTTTTTT;MAPQ=60;MATEID=461722:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_88371501_88396501_9C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
8	88660960	461783:1	A	]8:88762721]A	28	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=461783:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_88739001_88764001_10C;SPAN=101761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
8	88762721	461783:2	A	A[8:88660960[	28	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=461783:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_88739001_88764001_10C;SPAN=101761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
8	90572079	480933:1	T	T]8:140089087]	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=480933:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_140066501_140091501_99C;SPAN=49517008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:10:5:-43.34:43.34
8	90572448	462287:1	C	C]17:57501774]	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=462287:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_90552001_90577001_44C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:7:7:-29.85:29.85
8	90572493	462288:1	T	T]8:91552326]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=462288:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:90572493(+)-8:91552326(+)__8_90552001_90577001D;SPAN=979833;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
8	91551154	462485:2	G	]4:155293071]G	24	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=462485:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_91532001_91557001_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
8	91552255	474755:1	A	A[8:124579365[	18	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GA;MAPQ=60;MATEID=474755:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_8_124558001_124583001_91C;SPAN=33027110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:7:5:-18.75:20.87
8	91552326	462288:2	T	T]8:90572493]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=462288:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:90572493(+)-8:91552326(+)__8_90552001_90577001D;SPAN=979833;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
8	91873626	248969:2	C	C]4:113846014]	20	PASS	DISC_MAPQ=11;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=35;MATEID=248969:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_113827001_113852001_31C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:7:4:-20.43:21.63
8	93040697	462926:1	A	]8:93059897]A	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=462926:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93040697(-)-8:93059897(+)__8_93051001_93076001D;SPAN=19200;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
8	93059897	462926:2	A	A[8:93040697[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=462926:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93040697(-)-8:93059897(+)__8_93051001_93076001D;SPAN=19200;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
8	93654319	463125:1	T	T[19:9167128[	62	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=463125:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93654319(+)-19:9167128(-)__8_93639001_93664001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:0:21:-62.72:62.72
8	95863000	463991:1	T	T[8:95867363[	47	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=463991:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_95844001_95869001_11C;SPAN=4363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:17:0:-48.35:48.35
8	95867363	463991:2	C	]8:95863000]C	47	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=463991:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_95844001_95869001_11C;SPAN=4363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:17:0:-48.35:48.35
8	96085860	464075:1	A	A[8:96086198[	55	PASS	EVDNC=ASSMB;HOMSEQ=GAAAGAGAGGTATTA;MAPQ=60;MATEID=464075:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_8_96064501_96089501_8C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:168:55.3:55.3,0,365.6:31:0:-55.11:68.49
8	96086198	464075:2	G	]8:96085860]G	55	PASS	EVDNC=ASSMB;HOMSEQ=GAAAGAGAGGTATTA;MAPQ=60;MATEID=464075:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_8_96064501_96089501_8C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:168:55.3:55.3,0,365.6:31:0:-55.11:68.49
8	96173027	464091:2	C	]4:139694008]C	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=464091:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_54C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06
8	96174456	464088:2	A	A[4:116722508[	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=464088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_12C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:10:11:-45.23:45.23
8	97583181	464420:1	T	T[8:97583504[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATAATAAATTTTT;MAPQ=60;MATEID=464420:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_97583501_97608501_87C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:12:10.5:115.5,10.5,0:38:0:-115.5:115.5
8	97583504	464420:2	A	]8:97583181]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATAATAAATTTTT;MAPQ=60;MATEID=464420:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_97583501_97608501_87C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:12:10.5:115.5,10.5,0:38:0:-115.5:115.5
8	98214711	464688:2	G	G]4:141260902]	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AA;MAPQ=60;MATEID=464688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_98196001_98221001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:9:2:-27.11:27.11
8	98919076	464913:1	C	]8:99035533]C	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=464913:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:98919076(-)-8:99035533(+)__8_99029001_99054001D;SPAN=116457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76
8	99035533	464913:2	A	A[8:98919076[	22	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=464913:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:98919076(-)-8:99035533(+)__8_99029001_99054001D;SPAN=116457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76
8	100064021	882837:1	T	]20:47782526]T	63	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=882837:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47775001_47800001_26C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:116:63.2:63.2,0,228.2:20:27:-63.12:68.41
8	101325742	465752:1	T	]8:101488146]T	18	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=465752:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101307501_101332501_6C;SPAN=162404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87
8	101448776	465866:1	T	]8:101540338]T	52	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=465866:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101528001_101553001_15C;SPAN=91562;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:60:52.4:52.4,0,98.6:21:0:-52.46:53.23
8	101488146	465752:2	T	T[8:101325742[	18	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=465752:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101307501_101332501_6C;SPAN=162404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87
8	101540338	465866:2	A	A[8:101448776[	52	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=465866:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101528001_101553001_15C;SPAN=91562;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:60:52.4:52.4,0,98.6:21:0:-52.46:53.23
8	102423273	466221:1	A	A]8:102423778]	82	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TAGCTGGGATTAC;MAPQ=60;MATEID=466221:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_102410001_102435001_106C;SPAN=505;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:47:33.2:82.7,0,33.2:17:21:-83.52:83.52
8	102423778	466221:2	C	C]8:102423273]	82	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TAGCTGGGATTAC;MAPQ=60;MATEID=466221:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_102410001_102435001_106C;SPAN=505;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:47:33.2:82.7,0,33.2:17:21:-83.52:83.52
8	103749080	466883:1	T	T[8:103749364[	1	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCAT;MAPQ=36;MATEID=466883:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_103733001_103758001_111C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:53:1.7:1.7,0,130.4:5:0:-1.607:9.478
8	103749364	466883:2	G	]8:103749080]G	1	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCAT;MAPQ=60;MATEID=466883:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_103733001_103758001_111C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:53:1.7:1.7,0,130.4:5:0:-1.607:9.478
8	103833107	510495:1	T	T[9:109410883[	32	PASS	EVDNC=ASSMB;INSERTION=GCATTTTTT;MAPQ=60;MATEID=510495:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_109392501_109417501_62C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
8	103863624	427546:2	T	]7:133435161]T	42	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=427546:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_133427001_133452001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91
8	104467414	467167:1	C	]8:104538330]C	12	PASS	EVDNC=ASSMB;HOMSEQ=CCCA;MAPQ=60;MATEID=467167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_104517001_104542001_2C;SPAN=70916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:39:12.2:12.2,0,84.8:7:0:-12.14:15.37
8	104538330	467167:2	A	A[8:104467414[	12	PASS	EVDNC=ASSMB;HOMSEQ=CCCA;MAPQ=60;MATEID=467167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_104517001_104542001_2C;SPAN=70916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:39:12.2:12.2,0,84.8:7:0:-12.14:15.37
8	105955934	467732:1	A	A[8:105956892[	24	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=47;MATEID=467732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_105938001_105963001_27C;SPAN=958;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:66:24.5:24.5,0,140:9:8:-24.36:29.13
8	105956892	467732:2	A	]8:105955934]A	24	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=467732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_105938001_105963001_27C;SPAN=958;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:66:24.5:24.5,0,140:9:8:-24.36:29.13
8	106040326	467745:1	A	A[8:106040600[	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=467745:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106036001_106061001_27C;SPAN=274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:51:5.6:121.1,0,5.6:41:0:-127:127
8	106040600	467745:2	C	]8:106040326]C	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=467745:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106036001_106061001_27C;SPAN=274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:51:5.6:121.1,0,5.6:41:0:-127:127
8	106498881	467953:1	G	G[8:106499191[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATTAGGAGATG;MAPQ=60;MATEID=467953:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106477001_106502001_118C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:34:13.5:148.5,13.5,0:49:0:-148.5:148.5
8	106499191	467953:2	A	]8:106498881]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATTAGGAGATG;MAPQ=60;MATEID=467953:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106477001_106502001_118C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:34:13.5:148.5,13.5,0:49:0:-148.5:148.5
8	107108006	468214:1	G	G[8:107108310[	65	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATGCATGAACATTGG;MAPQ=60;MATEID=468214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107089501_107114501_16C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36
8	107108310	468214:2	A	]8:107108006]A	65	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATGCATGAACATTGG;MAPQ=60;MATEID=468214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107089501_107114501_16C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36
8	107368493	468346:1	T	T[8:107368851[	71	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTT;MAPQ=60;MATEID=468346:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_107359001_107384001_126C;SPAN=358;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:41:31.4:71,0,31.4:15:15:-71.79:71.79
8	107368851	468346:2	T	]8:107368493]T	71	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTT;MAPQ=60;MATEID=468346:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_107359001_107384001_126C;SPAN=358;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:41:31.4:71,0,31.4:15:15:-71.79:71.79
8	107612139	468511:1	A	]8:107622099]A	2	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACA;MAPQ=60;MATEID=468511:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107604001_107629001_103C;SPAN=9960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:96:2.9:2.9,0,237.2:2:9:-2.724:17.03
8	107622099	468511:2	A	A[8:107612139[	2	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACA;MAPQ=60;MATEID=468511:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107604001_107629001_103C;SPAN=9960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:96:2.9:2.9,0,237.2:2:9:-2.724:17.03
8	107769184	468586:1	G	G[8:107770194[	86	PASS	EVDNC=ASSMB;INSERTION=GAGCATTCAT;MAPQ=60;MATEID=468586:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_107751001_107776001_95C;SPAN=1010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:47:29.9:86,0,29.9:30:0:-87.13:87.13
8	107770194	468586:2	G	]8:107769184]G	86	PASS	EVDNC=ASSMB;INSERTION=GAGCATTCAT;MAPQ=60;MATEID=468586:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_107751001_107776001_95C;SPAN=1010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:47:29.9:86,0,29.9:30:0:-87.13:87.13
8	108717946	468836:1	T	T[8:108718258[	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGACTTAGGTTTT;MAPQ=60;MATEID=468836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_108706501_108731501_74C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:36:9.9:108.9,9.9,0:33:0:-107.6:107.6
8	108718258	468836:2	C	]8:108717946]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGACTTAGGTTTT;MAPQ=60;MATEID=468836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_108706501_108731501_74C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:36:9.9:108.9,9.9,0:33:0:-107.6:107.6
8	108770582	468851:2	A	A[4:111438522[	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=468851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:111438522(-)-8:108770582(+)__8_108755501_108780501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:0:9:-15.65:19.78
8	109065134	469005:1	A	]8:109065246]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=469005:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_8_109049501_109074501_87C;SPAN=112;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:100:99:117.2,0,133.7:44:0:-117.1:117.2
8	109065246	469005:2	A	A[8:109065134[	99	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=469005:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_8_109049501_109074501_87C;SPAN=112;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:100:99:117.2,0,133.7:44:0:-117.1:117.2
8	109222490	469108:1	C	C[8:109222824[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=469108:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_109221001_109246001_68C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:54:34.4:100.4,0,34.4:35:0:-102:102
8	109222824	469108:2	A	]8:109222490]A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=469108:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_109221001_109246001_68C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:54:34.4:100.4,0,34.4:35:0:-102:102
8	109495685	469227:2	A	[8:78551616[A	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=469227:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_42C;SPAN=30944069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:38:35.6:58.7,0,35.6:14:12:-58.9:58.9
8	109498091	469232:1	T	T[8:109498401[	80	PASS	EVDNC=ASSMB;HOMSEQ=CATGTTTTCTTTT;MAPQ=60;MATEID=469232:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_26C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:43:27.5:80.3,0,27.5:28:0:-81.73:81.73
8	109498401	469232:2	C	]8:109498091]C	80	PASS	EVDNC=ASSMB;HOMSEQ=CATGTTTTCTTTT;MAPQ=60;MATEID=469232:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_26C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:43:27.5:80.3,0,27.5:28:0:-81.73:81.73
8	109517001	469240:2	A	A[4:122720683[	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=469240:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109515001_109540001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:53:28.1:28.1,0,104:13:0:-28.02:30.54
8	111281823	469836:1	G	G[8:111284911[	86	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=469836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_111279001_111304001_53C;SPAN=3088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98
8	111284911	469836:2	G	]8:111281823]G	86	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=469836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_111279001_111304001_53C;SPAN=3088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98
8	111355427	473012:1	T	T[8:120549876[	44	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=473012:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_120540001_120565001_41C;SPAN=9194449;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85
8	113044266	470428:1	G	G[8:113046544[	99	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=470428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_113043001_113068001_9C;SPAN=2278;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:35:11.7:128.7,11.7,0:42:0:-128.7:128.7
8	113046544	470428:2	A	]8:113044266]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=470428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_113043001_113068001_9C;SPAN=2278;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:35:11.7:128.7,11.7,0:42:0:-128.7:128.7
8	114067086	470703:1	C	C[8:114068448[	99	PASS	EVDNC=ASSMB;INSERTION=CAG;MAPQ=60;MATEID=470703:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114047501_114072501_183C;SPAN=1362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:32:12:132,12,0:43:0:-132:132
8	114068448	470703:2	A	]8:114067086]A	99	PASS	EVDNC=ASSMB;INSERTION=CAG;MAPQ=60;MATEID=470703:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114047501_114072501_183C;SPAN=1362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:32:12:132,12,0:43:0:-132:132
8	114245422	470781:1	C	C[8:114246294[	22	PASS	DISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=470781:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114243501_114268501_42C;SPAN=872;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:49:22.7:22.7,0,98.6:10:2:-22.54:25.36
8	114246294	470781:2	T	]8:114245422]T	22	PASS	DISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=470781:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114243501_114268501_42C;SPAN=872;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:49:22.7:22.7,0,98.6:10:2:-22.54:25.36
8	115476006	471204:1	T	T[8:115476319[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAAAATATACTTTCT;MAPQ=60;MATEID=471204:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_115468501_115493501_69C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:32.9:32.9,0,56:8:6:-32.79:33.17
8	115476319	471204:2	C	]8:115476006]C	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAAAATATACTTTCT;MAPQ=60;MATEID=471204:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_115468501_115493501_69C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:32.9:32.9,0,56:8:6:-32.79:33.17
8	117667362	471947:2	T	[2:125013432[T	92	PASS	DISC_MAPQ=27;EVDNC=ASDIS;INSERTION=AAATAAAAT;MAPQ=0;MATEID=471947:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_117649001_117674001_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:26:8.4:92.4,8.4,0:27:7:-92.42:92.42
8	117968533	472068:1	A	A[8:117968870[	91	PASS	EVDNC=ASSMB;HOMSEQ=ATTCTGCCTTATTTA;MAPQ=60;MATEID=472068:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_117967501_117992501_107C;SPAN=337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:40:8.6:91.1,0,8.6:31:0:-94.93:94.93
8	117968870	472068:2	A	]8:117968533]A	91	PASS	EVDNC=ASSMB;HOMSEQ=ATTCTGCCTTATTTA;MAPQ=60;MATEID=472068:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_117967501_117992501_107C;SPAN=337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:40:8.6:91.1,0,8.6:31:0:-94.93:94.93
8	120321170	472949:1	G	]8:120378583]G	15	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=472949:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_120368501_120393501_35C;SPAN=57413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78
8	120378583	472949:2	C	C[8:120321170[	15	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=472949:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_120368501_120393501_35C;SPAN=57413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78
8	120549876	473012:2	T	]8:111355427]T	44	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=473012:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_120540001_120565001_41C;SPAN=9194449;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85
8	120669445	473069:1	T	T[8:120669752[	99	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATGCTTGTT;MAPQ=60;MATEID=473069:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_120662501_120687501_107C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114
8	120669752	473069:2	G	]8:120669445]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATGCTTGTT;MAPQ=60;MATEID=473069:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_120662501_120687501_107C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114
8	122286805	473790:1	T	]8:122286919]T	5	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=473790:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122279501_122304501_48C;SPAN=114;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:75:5.3:5.3,0,183.5:8:0:-5.326:15.61
8	122286919	473790:2	C	C[8:122286805[	5	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=473790:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122279501_122304501_48C;SPAN=114;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:75:5.3:5.3,0,183.5:8:0:-5.326:15.61
8	122356933	473874:1	C	]8:122460639]C	30	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=473874:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122451001_122476001_45C;SPAN=103706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
8	122460639	473874:2	C	C[8:122356933[	30	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=473874:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122451001_122476001_45C;SPAN=103706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
8	124301274	474613:1	T	]8:124311894]T	9	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=474613:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_124288501_124313501_19C;SPAN=10620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:61:9.5:9.5,0,141.5:8:0:-9.261:16.38
8	124311894	474613:2	G	G[8:124301274[	9	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=474613:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_124288501_124313501_19C;SPAN=10620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:61:9.5:9.5,0,141.5:8:0:-9.261:16.38
8	124579365	474755:2	G	]8:91552255]G	18	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GA;MAPQ=60;MATEID=474755:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_8_124558001_124583001_91C;SPAN=33027110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:7:5:-18.75:20.87
8	125582885	475223:1	A	A[8:125588891[	99	PASS	EVDNC=ASSMB;HOMSEQ=CACTCACA;MAPQ=60;MATEID=475223:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_8_125587001_125612001_12C;SPAN=6006;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:31:12.9:141.9,12.9,0:47:0:-141.9:141.9
8	125588891	475223:2	C	]8:125582885]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CACTCACA;MAPQ=60;MATEID=475223:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_8_125587001_125612001_12C;SPAN=6006;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:31:12.9:141.9,12.9,0:47:0:-141.9:141.9
8	125669145	475249:1	T	T[8:125669463[	80	PASS	EVDNC=ASSMB;HOMSEQ=TCATGTTAATTTTT;MAPQ=60;MATEID=475249:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_8_125660501_125685501_80C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
8	125669463	475249:2	T	]8:125669145]T	80	PASS	EVDNC=ASSMB;HOMSEQ=TCATGTTAATTTTT;MAPQ=60;MATEID=475249:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_8_125660501_125685501_80C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
8	126114017	475363:2	C	]4:127522207]C	20	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=475363:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126101501_126126501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
8	126179961	475380:1	C	C[8:126182328[	70	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=475380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126175001_126200001_66C;SPAN=2367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:54:64.1:70.7,0,64.1:26:0:-70.66:70.66
8	126182328	475380:2	A	]8:126179961]A	70	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=475380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126175001_126200001_66C;SPAN=2367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:54:64.1:70.7,0,64.1:26:0:-70.66:70.66
8	126236711	475428:1	T	T[8:126237039[	67	PASS	EVDNC=ASSMB;INSERTION=AAAACATT;MAPQ=60;MATEID=475428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126224001_126249001_170C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07
8	126237039	475428:2	C	]8:126236711]C	67	PASS	EVDNC=ASSMB;INSERTION=AAAACATT;MAPQ=60;MATEID=475428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126224001_126249001_170C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07
8	126797640	477799:1	T	T]8:131831800]	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCT;MAPQ=60;MATEID=477799:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131810001_131835001_1C;SPAN=5034160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:20:8:-81.69:81.69
8	127117370	475747:1	T	[8:127118469[T	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=475747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127106001_127131001_15C;SPAN=1099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:72:26:26,0,154.7:10:6:-25.98:31.28
8	127118469	475747:2	C	[8:127117370[C	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=475747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127106001_127131001_15C;SPAN=1099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:72:26:26,0,154.7:10:6:-25.98:31.28
8	127521585	475914:2	A	[3:111555239[A	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=AAAAAAATAAAAAA;MAPQ=60;MATEID=475914:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_8_127498001_127523001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:87:45:24.3:267.3,24.3,0:46:56:-267.4:267.4
8	127521605	475916:2	A	A[7:65340142[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=475916:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127498001_127523001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:56:37.1:103.1,0,37.1:34:6:-104.7:104.7
8	128092140	476301:1	A	]8:128260292]A	65	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=476301:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128257501_128282501_49C;SPAN=168152;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18
8	128260292	476301:2	A	A[8:128092140[	65	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=476301:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128257501_128282501_49C;SPAN=168152;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18
8	128452922	476384:1	T	T[8:128459021[	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAGCTTGTGTTTTT;MAPQ=60;MATEID=476384:2;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_8_128453501_128478501_6C;SPAN=6099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:23:18.3:201.3,18.3,0:66:0:-201.3:201.3
8	128459021	476384:2	C	]8:128452922]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAGCTTGTGTTTTT;MAPQ=60;MATEID=476384:1;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_8_128453501_128478501_6C;SPAN=6099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:23:18.3:201.3,18.3,0:66:0:-201.3:201.3
8	128891244	476530:1	A	A[8:131821933[	54	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=476530:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128870001_128895001_45C;SPAN=2930689;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:19:0:-55.55:55.55
8	129429457	480935:1	T	T[8:140088893[	20	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=480935:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_37C;SPAN=10659436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
8	129429474	476707:2	A	[4:126064282[A	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=476707:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_74C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:13:3:-39.96:39.98
8	129429764	476702:2	A	A[4:105671656[	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=476702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_125C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:30:17.9:57.5,0,17.9:13:9:-58.74:58.74
8	129727754	476951:1	G	]8:129865311]G	14	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=476951:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129850001_129875001_17C;SPAN=137557;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27
8	129865311	476951:2	G	G[8:129727754[	14	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=476951:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129850001_129875001_17C;SPAN=137557;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27
8	130535526	477262:2	C	[4:182335217[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=477262:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_130511501_130536501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:25:10.5:115.5,10.5,0:27:19:-115.5:115.5
8	130722580	477337:1	T	T[8:141644937[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT;MAPQ=60;MATEID=477337:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_130707501_130732501_91C;SPAN=10922357;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:5:-29.21:29.92
8	130897690	477423:1	T	[8:130898322[T	34	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=477423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:130897690(-)-8:130898322(-)__8_130879001_130904001D;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:79:34.1:34.1,0,162.8:0:17:-33.91:38.83
8	130898322	477423:2	G	[8:130897690[G	34	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=477423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:130897690(-)-8:130898322(-)__8_130879001_130904001D;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:79:34.1:34.1,0,162.8:0:17:-33.91:38.83
8	131152906	477489:2	G	G[4:139733131[	31	PASS	EVDNC=ASSMB;INSERTION=ATCTGCATTTTT;MAPQ=60;MATEID=477489:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131148501_131173501_29C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
8	131821933	476530:2	G	]8:128891244]G	54	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=476530:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128870001_128895001_45C;SPAN=2930689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:19:0:-55.55:55.55
8	131831800	477799:2	A	A]8:126797640]	79	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTCT;MAPQ=60;MATEID=477799:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131810001_131835001_1C;SPAN=5034160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:20:8:-81.69:81.69
8	133317217	478309:1	T	T[8:133317524[	99	PASS	EVDNC=ASSMB;HOMSEQ=CATAATAACTATTTTT;MAPQ=60;MATEID=478309:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_133304501_133329501_17C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3
8	133317524	478309:2	C	]8:133317217]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CATAATAACTATTTTT;MAPQ=60;MATEID=478309:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_133304501_133329501_17C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3
8	134070686	478579:1	T	T[8:134076773[	10	PASS	EVDNC=ASSMB;HOMSEQ=CATTCTTCAACATTTT;MAPQ=60;MATEID=478579:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_134064001_134089001_56C;SPAN=6087;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:58:10.1:10.1,0,135.5:8:0:-10.1:16.57
8	134076773	478579:2	C	]8:134070686]C	10	PASS	EVDNC=ASSMB;HOMSEQ=CATTCTTCAACATTTT;MAPQ=60;MATEID=478579:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_134064001_134089001_56C;SPAN=6087;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:58:10.1:10.1,0,135.5:8:0:-10.1:16.57
8	135895484	479171:1	A	]8:135918805]A	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=479171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_135901501_135926501_131C;SPAN=23321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:8:10:-40.18:40.18
8	135918805	479171:2	G	G[8:135895484[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=479171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_135901501_135926501_131C;SPAN=23321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:8:10:-40.18:40.18
8	136147954	479271:1	C	C[8:136151656[	99	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=479271:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136146501_136171501_74C;SPAN=3702;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
8	136151656	479271:2	G	]8:136147954]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=479271:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136146501_136171501_74C;SPAN=3702;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
8	136645913	479453:2	A	[4:142696529[A	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=479453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:2:-26.26:26.32
8	136646252	479457:2	G	]4:145607890]G	16	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=479457:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:145607890(+)-8:136646252(-)__8_136636501_136661501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:36:16.4:16.4,0,72.5:0:8:-16.29:18.4
8	136646564	479452:2	C	C[4:141260745[	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=479452:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_40C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:8:5:-24.86:25.27
8	138020879	886287:1	G	]20:55858690]G	22	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=886287:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_55835501_55860501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:6:8:-22.05:23.72
8	138632595	480393:2	G	[4:133589596[G	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=480393:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_138621001_138646001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:6:3:-17.41:18.87
8	139084311	671986:1	A	A[13:61171765[	29	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=671986:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_61152001_61177001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
8	139960606	480879:1	C	C[8:139962907[	33	PASS	EVDNC=ASSMB;INSERTION=AGT;MAPQ=60;MATEID=480879:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_139944001_139969001_95C;SPAN=2301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8
8	139962907	480879:2	A	]8:139960606]A	33	PASS	EVDNC=ASSMB;INSERTION=AGT;MAPQ=60;MATEID=480879:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_139944001_139969001_95C;SPAN=2301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8
8	140088893	480935:2	T	]8:129429457]T	20	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=480935:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_37C;SPAN=10659436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
8	140089087	480933:2	A	A]8:90572079]	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=480933:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_99C;SPAN=49517008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:10:5:-43.34:43.34
8	141227424	481280:1	T	T[8:141229502[	14	PASS	EVDNC=ASSMB;HOMSEQ=AGCT;MAPQ=60;MATEID=481280:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_141218001_141243001_16C;SPAN=2078;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:7:0:-13.83:15.94
8	141229502	481280:2	A	]8:141227424]A	14	PASS	EVDNC=ASSMB;HOMSEQ=AGCT;MAPQ=60;MATEID=481280:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_141218001_141243001_16C;SPAN=2078;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:7:0:-13.83:15.94
8	141347578	481342:1	T	]8:141348077]T	23	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=481342:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:141347578(-)-8:141348077(+)__8_141340501_141365501D;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
8	141348077	481342:2	A	A[8:141347578[	23	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=481342:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:141347578(-)-8:141348077(+)__8_141340501_141365501D;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
8	141644937	477337:2	T	]8:130722580]T	29	PASS	DISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT;MAPQ=37;MATEID=477337:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_130707501_130732501_91C;SPAN=10922357;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:5:-29.21:29.92
8	142222638	481809:1	A	]8:142223127]A	13	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=481809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142222638(-)-8:142223127(+)__8_142222501_142247501D;SPAN=489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:48:13.1:13.1,0,105.5:0:8:-12.92:17.28
8	142223127	481809:2	C	C[8:142222638[	13	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=481809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142222638(-)-8:142223127(+)__8_142222501_142247501D;SPAN=489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:48:13.1:13.1,0,105.5:0:8:-12.92:17.28
8	142413422	481912:1	C	C[8:142414319[	99	PASS	EVDNC=ASSMB;HOMSEQ=CACAC;MAPQ=60;MATEID=481912:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_8_142394001_142419001_27C;SPAN=897;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6
8	142414319	481912:2	C	]8:142413422]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CACAC;MAPQ=60;MATEID=481912:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_8_142394001_142419001_27C;SPAN=897;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6
8	142832825	482096:1	C	[8:142838254[C	20	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=482096:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142832825(-)-8:142838254(-)__8_142810501_142835501D;SPAN=5429;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
8	142838254	482096:2	G	[8:142832825[G	20	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=482096:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142832825(-)-8:142838254(-)__8_142810501_142835501D;SPAN=5429;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
8	142877785	482139:1	G	G[8:142915758[	42	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=482139:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142877785(+)-8:142915758(-)__8_142908501_142933501D;SPAN=37973;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91
8	142915758	482139:2	G	]8:142877785]G	42	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=482139:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142877785(+)-8:142915758(-)__8_142908501_142933501D;SPAN=37973;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91
8	143093112	482353:1	C	]8:143204625]C	60	PASS	EVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=482353:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_143202501_143227501_66C;SPAN=111513;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
8	143204625	482353:2	T	T[8:143093112[	60	PASS	EVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=482353:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_143202501_143227501_66C;SPAN=111513;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
8	143551897	482512:1	T	T[8:143554070[	82	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=482512:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_143545501_143570501_56C;SPAN=2173;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52
8	143554070	482512:2	T	]8:143551897]T	82	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=482512:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_143545501_143570501_56C;SPAN=2173;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52
8	143618862	482537:2	T	[3:186858374[T	52	PASS	DISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=6;MATEID=482537:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143619001_143644001_92C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:1:4.8:52.8,4.8,0:13:9:-52.81:52.81
8	143746946	482663:1	C	]8:143895039]C	25	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=482663:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143888501_143913501_10C;SPAN=148093;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
8	143895039	482663:2	C	C[8:143746946[	25	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=482663:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143888501_143913501_10C;SPAN=148093;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
8	144020506	482722:1	T	]8:144021175]T	32	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=482722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:144020506(-)-8:144021175(+)__8_144011001_144036001D;SPAN=669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:32.9:32.9,0,56:0:13:-32.79:33.17
8	144021175	482722:2	T	T[8:144020506[	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=482722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:144020506(-)-8:144021175(+)__8_144011001_144036001D;SPAN=669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:32.9:32.9,0,56:0:13:-32.79:33.17
8	144619941	482943:1	T	]8:144620589]T	68	PASS	EVDNC=ASSMB;HOMSEQ=TGAGAGCATGTGTGCC;MAPQ=60;MATEID=482943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_144599001_144624001_44C;SPAN=648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:63:68.3:68.3,0,88.1:26:0:-68.12:68.29
8	144620589	482943:2	C	C[8:144619941[	68	PASS	EVDNC=ASSMB;HOMSEQ=TGAGAGCATGTGTGCC;MAPQ=60;MATEID=482943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_144599001_144624001_44C;SPAN=648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:63:68.3:68.3,0,88.1:26:0:-68.12:68.29
8	145021387	483041:1	T	]8:145028047]T	99	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=483041:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:145021387(-)-8:145028047(+)__8_145015501_145040501D;SPAN=6660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:63:32:124.4,0,32:0:43:-127.1:127.1
8	145028047	483041:2	G	G[8:145021387[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=483041:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:145021387(-)-8:145028047(+)__8_145015501_145040501D;SPAN=6660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:63:32:124.4,0,32:0:43:-127.1:127.1
9	320206	483191:1	A	A[9:322353[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCAAAACCTGACCGAACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCA;MAPQ=60;MATEID=483191:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_318501_343501_0C;SPAN=2147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:4:8.4:92.4,8.4,0:9:22:-92.42:92.42
9	322353	483191:2	A	]9:320206]A	92	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=AACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCAAAACCTGACCGAACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCA;MAPQ=60;MATEID=483191:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_318501_343501_0C;SPAN=2147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:4:8.4:92.4,8.4,0:9:22:-92.42:92.42
9	584229	483259:2	A	]4:97127269]A	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=483259:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:6:5:-30.15:30.15
9	584347	483264:1	G	G[9:1096692[	24	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=483264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_8C;SPAN=512345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
9	793721	483347:1	G	G[9:794383[	39	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCCTTTCTGCTTAAACTGGCTTGAGTGAATTCTGTTGTCTGCAACTAAAAACACTAATCCACATAAGATCCTTGGTTTTATTTACTGATGCTCTAGTCACTTGCCATTTTCTACTGAATTCTCCTTTTCTCCTCATTAGGATCCCTATGTCAATGCTCTGTCCCTGCCTCTAG;MAPQ=60;MATEID=483347:2;MATENM=4;NM=6;NUMPARTS=2;SCTG=c_9_784001_809001_19C;SPAN=662;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:0:3.6:39.6,3.6,0:0:13:-39.61:39.61
9	794383	483347:2	C	]9:793721]C	39	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCCTTTCTGCTTAAACTGGCTTGAGTGAATTCTGTTGTCTGCAACTAAAAACACTAATCCACATAAGATCCTTGGTTTTATTTACTGATGCTCTAGTCACTTGCCATTTTCTACTGAATTCTCCTTTTCTCCTCATTAGGATCCCTATGTCAATGCTCTGTCCCTGCCTCTAG;MAPQ=60;MATEID=483347:1;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_9_784001_809001_19C;SPAN=662;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:0:3.6:39.6,3.6,0:0:13:-39.61:39.61
9	1096692	483264:2	A	]9:584347]A	24	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=483264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_8C;SPAN=512345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
9	2279343	483943:1	T	T]9:3813164]	23	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=483943:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:2279343(+)-9:3813164(+)__9_3797501_3822501D;SPAN=1533821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
9	3813164	483943:2	T	T]9:2279343]	23	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=483943:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:2279343(+)-9:3813164(+)__9_3797501_3822501D;SPAN=1533821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
9	6888787	484745:1	T	T[9:6889088[	46	PASS	EVDNC=ASSMB;HOMSEQ=CTTCTGTGTTTTTT;MAPQ=60;MATEID=484745:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_6884501_6909501_8C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02
9	6889088	484745:2	C	]9:6888787]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CTTCTGTGTTTTTT;MAPQ=60;MATEID=484745:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_6884501_6909501_8C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02
9	7367657	484878:1	C	]9:7439854]C	62	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=484878:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_7423501_7448501_17C;SPAN=72197;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54
9	7439854	484878:2	G	G[9:7367657[	62	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=484878:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_7423501_7448501_17C;SPAN=72197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54
9	7741406	288543:2	C	C[5:39787650[	64	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=GAGTT;MAPQ=60;MATEID=288543:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_39763501_39788501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:20:12:-67.65:67.65
9	8826067	485180:1	A	]9:8868077]A	79	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=485180:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_8844501_8869501_18C;SPAN=42010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:21:7.2:79.2,7.2,0:26:0:-79.22:79.22
9	8868077	485180:2	G	G[9:8826067[	79	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=485180:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_8844501_8869501_18C;SPAN=42010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:21:7.2:79.2,7.2,0:26:0:-79.22:79.22
9	9054481	485408:1	T	T[9:9712574[	92	PASS	EVDNC=ASSMB;INSERTION=GGCAGTTGAAATAGTAGATATAAAATTATCATGACGTTTACCAGTAATATTTATGAT;MAPQ=60;MATEID=485408:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_9702001_9727001_28C;SPAN=658093;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:14:8.4:92.4,8.4,0:30:0:-92.42:92.42
9	9712574	485408:2	A	]9:9054481]A	92	PASS	EVDNC=ASSMB;INSERTION=GGCAGTTGAAATAGTAGATATAAAATTATCATGACGTTTACCAGTAATATTTATGAT;MAPQ=60;MATEID=485408:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_9702001_9727001_28C;SPAN=658093;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:14:8.4:92.4,8.4,0:30:0:-92.42:92.42
9	10098711	485469:2	A	A[4:117217096[	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=485469:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:117217096(-)-9:10098711(+)__9_10094001_10119001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
9	10841158	485690:2	T	]4:155419067]T	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=485690:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_10829001_10854001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:8:0:-19.94:20.25
9	10945775	489659:1	A	A[9:30287949[	36	PASS	EVDNC=ASSMB;HOMSEQ=AAGA;MAPQ=60;MATEID=489659:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_17C;SPAN=19342174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31
9	11384325	485861:2	G	G[8:245406[	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=485861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_11368001_11393001_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:4:6:-24.99:24.99
9	15815423	486901:1	T	T[9:15821942[	72	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=486901:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:15815423(+)-9:15821942(-)__9_15802501_15827501D;SPAN=6519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62
9	15821942	486901:2	G	]9:15815423]G	72	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=486901:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:15815423(+)-9:15821942(-)__9_15802501_15827501D;SPAN=6519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62
9	21837129	488016:1	T	T[9:22081242[	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=488016:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:21837129(+)-9:22081242(-)__9_22074501_22099501D;SPAN=244113;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	21841795	327574:2	A	A[6:13128174[	49	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=ATCACATCACAGGACTCTTTGCAGACATCCCCCAGCATCAGCTCAGACAGAGCCTGTTGCCCTGCTGAGTGGCTAGACCCAGAAGAGCAATAACAGTCACTGCAGTCCAGGTCTCAAGAAGCCCCATCCCTAGGGGAAGGGGGAGAGCACAACATCAAGGGGTCACCCCTTGGGACAAGAAAATCTGAACAGCAGCCCTTGAGTTTCAAACTTCTC;INSERTION=ACTTCTC;MAPQ=33;MATEID=327574:1;MATENM=0;NM=8;NUMPARTS=4;REPSEQ=CTCT;SCTG=c_6_13107501_13132501_88C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:13:6:-49.51:49.51
9	22081242	488016:2	C	]9:21837129]C	29	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=488016:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:21837129(+)-9:22081242(-)__9_22074501_22099501D;SPAN=244113;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	22496528	488102:1	T	T[9:22504346[	49	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=488102:2;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_9_22491001_22516001_0C;SPAN=7818;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:10:4.5:49.5,4.5,0:17:0:-49.51:49.51
9	22504346	488102:2	C	]9:22496528]C	49	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=488102:1;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_9_22491001_22516001_0C;SPAN=7818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:10:4.5:49.5,4.5,0:17:0:-49.51:49.51
9	23362803	488288:1	A	A[9:23377688[	42	PASS	EVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=488288:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_9_23373001_23398001_1C;SPAN=14885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:14:0:-42.91:42.91
9	23377688	488288:2	T	]9:23362803]T	42	PASS	EVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=488288:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_9_23373001_23398001_1C;SPAN=14885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:14:0:-42.91:42.91
9	24546560	123497:2	G	G]2:162753054]	17	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=123497:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:162753054(+)-9:24546560(+)__2_162729001_162754001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63
9	24908456	488516:1	G	]9:24908668]G	24	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=488516:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_24892001_24917001_15C;SPAN=212;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
9	24908668	488516:2	A	A[9:24908456[	24	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=488516:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_24892001_24917001_15C;SPAN=212;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
9	24980783	488542:1	G	G]Un_KN707681v1_decoy:4379]	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=488542:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_24965501_24990501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31
9	25849461	12984:2	T	]1:53953226]T	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12984:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:6:6:-22.05:23.72
9	26921863	488914:1	T	T[9:27029400[	46	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=488914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_27023501_27048501_9C;SPAN=107537;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:15:0:-46.21:46.21
9	27029400	488914:2	A	]9:26921863]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=488914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_27023501_27048501_9C;SPAN=107537;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:15:0:-46.21:46.21
9	28733895	489296:1	A	]9:28736771]A	24	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=489296:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_28714001_28739001_0C;SPAN=2876;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
9	28736771	489296:2	C	C[9:28733895[	24	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=489296:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_28714001_28739001_0C;SPAN=2876;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
9	29653849	13059:2	A	A[1:53954656[	7	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=13059:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_206C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:90:7.7:7.7,0,218.9:10:0:-7.712:19.71
9	29661186	489518:1	A	A[9:29664028[	25	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=489518:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_29645001_29670001_21C;SPAN=2842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35
9	29664028	489518:2	T	]9:29661186]T	25	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=489518:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_29645001_29670001_21C;SPAN=2842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35
9	30287949	489659:2	A	]9:10945775]A	36	PASS	EVDNC=ASSMB;HOMSEQ=AAGA;MAPQ=60;MATEID=489659:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_17C;SPAN=19342174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31
9	30288138	489652:2	G	]4:145607589]G	40	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=489652:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_41C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
9	30288184	702277:1	T	T[14:64280428[	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=702277:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_64263501_64288501_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
9	30288228	489646:2	G	[4:124756824[G	34	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AGGA;INSERTION=AAC;MAPQ=60;MATEID=489646:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=CAACAA;SCTG=c_9_30282001_30307001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:11.3:34.7,0,11.3:16:2:-35.31:35.31
9	30288439	489643:2	T	T]4:105671811]	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGT;MAPQ=60;MATEID=489643:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_56C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:10:5.1:56.1,5.1,0:14:5:-56.11:56.11
9	30690082	945666:1	T	T]X:136874391]	32	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=945666:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:30690082(+)-23:136874391(+)__23_136857001_136882001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57
9	33423378	490422:1	T	T[9:33424657[	23	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATCTAGTTTTT;MAPQ=60;MATEID=490422:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_33418001_33443001_20C;SPAN=1279;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
9	33424657	490422:2	A	]9:33423378]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATCTAGTTTTT;MAPQ=60;MATEID=490422:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_33418001_33443001_20C;SPAN=1279;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
9	34681484	490777:1	T	]9:34681981]T	72	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=490777:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_34667501_34692501_8C;SPAN=497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76
9	34681981	490777:2	G	G[9:34681484[	72	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=490777:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_34667501_34692501_8C;SPAN=497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76
9	36362899	491079:1	T	T[9:36364083[	75	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCT;MAPQ=60;MATEID=491079:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_36358001_36383001_4C;SPAN=1184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:17:15:-75.92:75.92
9	36364083	491079:2	G	]9:36362899]G	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCT;MAPQ=60;MATEID=491079:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_36358001_36383001_4C;SPAN=1184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:17:15:-75.92:75.92
9	36423668	491100:1	G	]13:73390558]G	56	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=G;MAPQ=22;MATEID=491100:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_36407001_36432001_29C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:14:6:-56.11:56.11
9	37090389	491310:1	A	]9:37377642]A	29	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=491310:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:37090389(-)-9:37377642(+)__9_37362501_37387501D;SPAN=287253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	37377642	491310:2	G	G[9:37090389[	29	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=491310:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:37090389(-)-9:37377642(+)__9_37362501_37387501D;SPAN=287253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	40899697	492400:1	A	A[9:40902847[	36	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=492400:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40899697(+)-9:40902847(-)__9_40890501_40915501D;SPAN=3150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05
9	40902847	492400:2	T	]9:40899697]T	36	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=492400:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40899697(+)-9:40902847(-)__9_40890501_40915501D;SPAN=3150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05
9	40923207	492711:1	C	C[9:40924335[	25	PASS	EVDNC=ASSMB;HOMSEQ=GGATTCCAGAACACTCCTGC;MAPQ=60;MATEID=492711:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_40915001_40940001_43C;SPAN=1128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:74:25.4:25.4,0,160.7:14:0:-25.41:31.1
9	40924335	492711:2	G	]9:40923207]G	25	PASS	EVDNC=ASSMB;HOMSEQ=GGATTCCAGAACACTCCTGC;MAPQ=60;MATEID=492711:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_40915001_40940001_43C;SPAN=1128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:74:25.4:25.4,0,160.7:14:0:-25.41:31.1
9	40929455	492742:1	A	A]9:63918421]	28	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=492742:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40929455(+)-9:63918421(+)__9_40915001_40940001D;SPAN=22988966;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:0:11:-28.16:28.37
9	41047840	232702:2	T	T[4:61939924[	26	PASS	DISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=44;MATEID=232702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61936001_61961001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:8:5:-26.41:26.41
9	41237750	495356:1	G	G[9:62802569[	33	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=495356:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:41237750(+)-9:62802569(-)__9_62793501_62818501D;SPAN=21564819;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:57:33.5:33.5,0,109.4:0:15:-33.49:35.77
9	42258584	493761:1	G	G[9:42259464[	47	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=493761:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:42258584(+)-9:42259464(-)__9_42238001_42263001D;SPAN=880;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:0:17:-48.35:48.35
9	42259464	493761:2	A	]9:42258584]A	47	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=493761:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:42258584(+)-9:42259464(-)__9_42238001_42263001D;SPAN=880;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:0:17:-48.35:48.35
9	42387022	493824:1	T	T[9:42387326[	43	PASS	EVDNC=ASSMB;HOMSEQ=AATTTGTGT;MAPQ=60;MATEID=493824:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_42385001_42410001_40C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
9	42387326	493824:2	A	]9:42387022]A	43	PASS	EVDNC=ASSMB;HOMSEQ=AATTTGTGT;MAPQ=60;MATEID=493824:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_42385001_42410001_40C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
9	43197994	494276:1	T	]9:43199957]T	99	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=494276:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:43197994(-)-9:43199957(+)__9_43193501_43218501D;SPAN=1963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:47:13.8:151.8,13.8,0:0:50:-151.8:151.8
9	43199957	494276:2	T	T[9:43197994[	99	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=494276:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:43197994(-)-9:43199957(+)__9_43193501_43218501D;SPAN=1963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:47:13.8:151.8,13.8,0:0:50:-151.8:151.8
9	45021766	494722:1	C	]9:45152397]C	42	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=494722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:45021766(-)-9:45152397(+)__9_45129001_45154001D;SPAN=130631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91
9	45152397	494722:2	T	T[9:45021766[	42	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=494722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:45021766(-)-9:45152397(+)__9_45129001_45154001D;SPAN=130631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91
9	61735346	873198:1	A	A[20:29636132[	36	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=873198:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:61735346(+)-20:29636132(-)__20_29620501_29645501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66
9	62802569	495356:2	G	]9:41237750]G	33	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=495356:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:41237750(+)-9:62802569(-)__9_62793501_62818501D;SPAN=21564819;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:57:33.5:33.5,0,109.4:0:15:-33.49:35.77
9	63843968	870923:1	C	C]20:29090598]	39	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=870923:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:63843968(+)-20:29090598(+)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:83:39.5:39.5,0,168.2:0:19:-39.39:43.98
9	63918421	492742:2	G	G]9:40929455]	28	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=492742:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40929455(+)-9:63918421(+)__9_40915001_40940001D;SPAN=22988966;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:0:11:-28.16:28.37
9	65079191	822950:1	T	T[18:15598663[	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=822950:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:65079191(+)-18:15598663(-)__18_15582001_15607001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
9	65437620	496905:2	T	[4:3594169[T	23	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=496905:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:3594169(-)-9:65437620(-)__9_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
9	69123206	497862:1	C	C[9:69128439[	59	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=497862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_69114501_69139501_19C;SPAN=5233;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41
9	69128439	497862:2	A	]9:69123206]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=497862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_69114501_69139501_19C;SPAN=5233;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41
9	69278069	404355:2	T	]7:72499762]T	13	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=404355:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:72499762(+)-9:69278069(-)__7_72495501_72520501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:46:13.7:13.7,0,99.5:0:8:-13.48:17.45
9	69280450	497903:1	T	T[9:69281647[	39	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=497903:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:69280450(+)-9:69281647(-)__9_69261501_69286501D;SPAN=1197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
9	69281647	497903:2	T	]9:69280450]T	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=497903:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:69280450(+)-9:69281647(-)__9_69261501_69286501D;SPAN=1197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
9	74283223	499130:1	A	[9:74283474[A	75	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=ACCTTCAAAGGCTGCAATTGGCCAGTTTGCTGAAGCAGCATTGCTGATTAGTTGATTAAATTAATAAAATGGGGCTTTTGCTACCACTGCATTATCAAAGTGTTACCCAACGATAAGTCCTTGAAAATATGTAAAATAAGTTAAAAGAGAGAAGAAACTGAGAAAGCCATTCATGACCACTGACAGAATTATGTCTCCATGGTGGGCTGGCAGGGCAGAGCAGTGGCCCTCTGCTGTGATCCCCTTCAAAGAACCCCCTGAGCCACCCAAAGAAAGCTGATGTGTCCACGGTTCTGTTCTTTTCAGGGGTAGATGTAGGTGGG;MAPQ=60;MATEID=499130:2;MATENM=9;NM=1;NUMPARTS=3;REPSEQ=GGG;SCTG=c_9_74284001_74309001_0C;SPAN=251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:0:6.9:75.9,6.9,0:25:0:-75.92:75.92
9	74283474	499130:2	G	[9:74283223[G	75	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=ACCTTCAAAGGCTGCAATTGGCCAGTTTGCTGAAGCAGCATTGCTGATTAGTTGATTAAATTAATAAAATGGGGCTTTTGCTACCACTGCATTATCAAAGTGTTACCCAACGATAAGTCCTTGAAAATATGTAAAATAAGTTAAAAGAGAGAAGAAACTGAGAAAGCCATTCATGACCACTGACAGAATTATGTCTCCATGGTGGGCTGGCAGGGCAGAGCAGTGGCCCTCTGCTGTGATCCCCTTCAAAGAACCCCCTGAGCCACCCAAAGAAAGCTGATGTGTCCACGGTTCTGTTCTTTTCAGGGGTAGATGTAGGTGGG;MAPQ=60;MATEID=499130:1;MATENM=1;NM=9;NUMPARTS=3;REPSEQ=GGG;SCTG=c_9_74284001_74309001_0C;SPAN=251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:0:6.9:75.9,6.9,0:25:0:-75.92:75.92
9	75533771	885083:1	T	[20:52043400[T	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=885083:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_52038001_52063001_156C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:36:36.2:52.7,0,36.2:14:14:-52.72:52.72
9	76304638	499637:1	T	T[9:76307080[	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=499637:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:76304638(+)-9:76307080(-)__9_76293001_76318001D;SPAN=2442;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
9	76307080	499637:2	A	]9:76304638]A	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=499637:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:76304638(+)-9:76307080(-)__9_76293001_76318001D;SPAN=2442;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
9	76940846	499922:1	A	A[9:76943186[	66	PASS	EVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=499922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_76930001_76955001_81C;SPAN=2340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:33:14:66.8,0,14:23:0:-68.34:68.34
9	76943186	499922:2	T	]9:76940846]T	66	PASS	EVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=499922:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_76930001_76955001_81C;SPAN=2340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:33:14:66.8,0,14:23:0:-68.34:68.34
9	79110862	500588:1	T	T[9:79111167[	33	PASS	EVDNC=ASSMB;HOMSEQ=CTAATGCAGGATTTTCT;MAPQ=60;MATEID=500588:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_79110501_79135501_48C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
9	79111167	500588:2	C	]9:79110862]C	33	PASS	EVDNC=ASSMB;HOMSEQ=CTAATGCAGGATTTTCT;MAPQ=60;MATEID=500588:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_79110501_79135501_48C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
9	80230263	500915:1	T	T[9:80230583[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTCTT;MAPQ=60;MATEID=500915:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_9_80213001_80238001_109C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:7:9:-35.04:35.04
9	80230583	500915:2	T	]9:80230263]T	35	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTTTTCTT;MAPQ=60;MATEID=500915:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_9_80213001_80238001_109C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:7:9:-35.04:35.04
9	81353010	501453:1	C	C[9:81355769[	60	PASS	EVDNC=ASSMB;HOMSEQ=TTTATAGC;MAPQ=60;MATEID=501453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81340001_81365001_30C;SPAN=2759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:33:20.6:60.2,0,20.6:21:0:-60.95:60.95
9	81355769	501453:2	T	]9:81353010]T	60	PASS	EVDNC=ASSMB;HOMSEQ=TTTATAGC;MAPQ=60;MATEID=501453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81340001_81365001_30C;SPAN=2759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:33:20.6:60.2,0,20.6:21:0:-60.95:60.95
9	81709448	501562:1	C	C[9:81712012[	7	PASS	EVDNC=ASSMB;HOMSEQ=TAAAATGGCTCTAGC;MAPQ=60;MATEID=501562:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81707501_81732501_4C;SPAN=2564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:292:7.3:7.3,0,726.8:27:0:-7.048:50.93
9	81712012	501562:2	T	]9:81709448]T	7	PASS	EVDNC=ASSMB;HOMSEQ=TAAAATGGCTCTAGC;MAPQ=60;MATEID=501562:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81707501_81732501_4C;SPAN=2564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:292:7.3:7.3,0,726.8:27:0:-7.048:50.93
9	83888182	502921:1	C	[9:85841178[C	14	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=502921:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:83888182(-)-9:85841178(-)__9_85823501_85848501D;SPAN=1952996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
9	85286501	502766:1	T	T[9:85286798[	41	PASS	EVDNC=ASSMB;HOMSEQ=TACATGTCTTT;MAPQ=60;MATEID=502766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_85284501_85309501_72C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81
9	85286798	502766:2	T	]9:85286501]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TACATGTCTTT;MAPQ=60;MATEID=502766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_85284501_85309501_72C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81
9	85841178	502921:2	T	[9:83888182[T	14	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=502921:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:83888182(-)-9:85841178(-)__9_85823501_85848501D;SPAN=1952996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
9	86052951	502981:1	A	]9:86053805]A	38	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=502981:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:86052951(-)-9:86053805(+)__9_86044001_86069001D;SPAN=854;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:51:38.6:38.6,0,88.1:0:16:-38.48:39.62
9	86053805	502981:2	A	A[9:86052951[	38	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=502981:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:86052951(-)-9:86053805(+)__9_86044001_86069001D;SPAN=854;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:51:38.6:38.6,0,88.1:0:16:-38.48:39.62
9	86539642	503199:1	T	T[9:86541032[	99	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=A;INSERTION=TATTGTGGGCCATGCCTTTTGATCATATTAGCTAGCAAGAGCTCCAGGTTTCCTCTCCATAATGAAAATTTTTGAGCCTAACAATAGTCAA;MAPQ=60;MATEID=503199:2;MATENM=3;NM=1;NUMPARTS=3;SCTG=c_9_86534001_86559001_5C;SPAN=1390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:14:10.5:115.5,10.5,0:37:5:-115.5:115.5
9	86541032	503199:2	A	]9:86539642]A	99	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=A;INSERTION=TATTGTGGGCCATGCCTTTTGATCATATTAGCTAGCAAGAGCTCCAGGTTTCCTCTCCATAATGAAAATTTTTGAGCCTAACAATAGTCAA;MAPQ=60;MATEID=503199:1;MATENM=1;NM=3;NUMPARTS=3;SCTG=c_9_86534001_86559001_5C;SPAN=1390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:14:10.5:115.5,10.5,0:37:5:-115.5:115.5
9	87184187	503415:1	T	T[9:87184493[	47	PASS	EVDNC=ASSMB;HOMSEQ=AATTTTTTT;MAPQ=60;MATEID=503415:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_87171001_87196001_87C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
9	87184493	503415:2	A	]9:87184187]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AATTTTTTT;MAPQ=60;MATEID=503415:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_87171001_87196001_87C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
9	88244081	503895:1	T	T[9:88246049[	99	PASS	EVDNC=ASSMB;HOMSEQ=TTATGTACCTTTT;MAPQ=60;MATEID=503895:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_88224501_88249501_5C;SPAN=1968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:52:4.5:138.6,4.5,0:45:0:-143:143
9	88246049	503895:2	T	]9:88244081]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TTATGTACCTTTT;MAPQ=60;MATEID=503895:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_88224501_88249501_5C;SPAN=1968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:52:4.5:138.6,4.5,0:45:0:-143:143
9	88370208	516185:1	G	]9:125174450]G	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=516185:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_40C;SPAN=36804242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66
9	88370788	516187:1	C	C[9:125174450[	53	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=516187:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_111C;SPAN=36803662;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
9	88385279	503963:1	T	T[20:47190406[	35	PASS	EVDNC=ASSMB;INSERTION=CAAAGCTAAAAAATGTAGG;MAPQ=60;MATEID=503963:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_88371501_88396501_10C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:13:0:-35.04:35.04
9	89437208	504384:2	A	]1:109198402]A	42	PASS	EVDNC=ASSMB;INSERTION=ACCATATATATAAATGTATGGCTGGAGA;MAPQ=60;MATEID=504384:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_89425001_89450001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9
9	89730120	504478:1	A	]9:89730492]A	13	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=504478:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:89730120(-)-9:89730492(+)__9_89719001_89744001D;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:0:8:-13.76:17.53
9	89730492	504478:2	G	G[9:89730120[	13	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=504478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:89730120(-)-9:89730492(+)__9_89719001_89744001D;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:0:8:-13.76:17.53
9	89854059	509734:1	T	T]9:107177389]	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=509734:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107163001_107188001_56C;SPAN=17323330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:9:4:-27.41:27.41
9	90432262	504759:2	T	T[8:63059041[	25	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TTTTTTTTTGAGACGG;INSERTION=TTTTTTGTTGTTGTTG;MAPQ=60;MATEID=504759:1;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_9_90429501_90454501_9C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46
9	93708073	505789:1	C	C[9:93709183[	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=505789:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_93688001_93713001_43C;SPAN=1110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
9	93709183	505789:2	C	]9:93708073]C	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=505789:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_93688001_93713001_43C;SPAN=1110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
9	93737881	505800:1	T	T[9:93740761[	49	PASS	EVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=505800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_93737001_93762001_14C;SPAN=2880;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
9	93740761	505800:2	A	]9:93737881]A	49	PASS	EVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=505800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_93737001_93762001_14C;SPAN=2880;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
9	94543397	505978:2	G	[4:135169406[G	22	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=505978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:135169406(-)-9:94543397(-)__9_94521001_94546001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
9	96822325	506693:1	A	]9:96896934]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=506693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_96873001_96898001_3C;SPAN=74609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
9	96896934	506693:2	T	T[9:96822325[	58	PASS	EVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=506693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_96873001_96898001_3C;SPAN=74609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
9	97902289	405771:2	T	[7:74689123[T	55	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGTAAAAATAATAAAAATAATAAACGGAGCTGCCTGGAGGCGGCCGCACTCG;MAPQ=60;MATEID=405771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_30C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:50:55.4:55.4,0,68.6:19:2:-55.27:55.37
9	98546766	507067:1	A	A[9:98549383[	99	PASS	EVDNC=ASSMB;HOMSEQ=TCTCA;MAPQ=60;MATEID=507067:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98539001_98564001_7C;SPAN=2617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:46:9.3:132,9.3,0:41:0:-131.9:131.9
9	98549383	507067:2	T	]9:98546766]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TCTCA;MAPQ=60;MATEID=507067:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98539001_98564001_7C;SPAN=2617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:46:9.3:132,9.3,0:41:0:-131.9:131.9
9	98577128	507084:1	A	]9:98577228]A	25	PASS	EVDNC=ASSMB;HOMSEQ=ATGGATGGATGGATGGATGGATGGA;MAPQ=60;MATEID=507084:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_98563501_98588501_62C;SPAN=100;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:87:25.1:25.1,0,193.4:15:0:-25.06:32.65
9	98577228	507084:2	A	A[9:98577128[	25	PASS	EVDNC=ASSMB;HOMSEQ=ATGGATGGATGGATGGATGGATGGA;MAPQ=60;MATEID=507084:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_62C;SPAN=100;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:87:25.1:25.1,0,193.4:15:0:-25.06:32.65
9	98585704	507086:1	T	T[9:98586035[	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=507086:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_72C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
9	98586035	507086:2	T	]9:98585704]T	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=507086:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_72C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
9	98712914	917272:1	C	]22:32179921]C	46	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=917272:2;MATENM=1;NM=7;NUMPARTS=3;SCTG=c_22_32168501_32193501_13C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:11:9:-46.21:46.21
9	98715302	917274:1	T	T[22:32179925[	62	PASS	DISC_MAPQ=30;EVDNC=ASDIS;INSERTION=GCATGGTGAGTCT;MAPQ=60;MATEID=917274:2;MATENM=2;NM=35;NUMPARTS=2;SCTG=c_22_32168501_32193501_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:19:7:-62.72:62.72
9	101419834	507872:1	C	]9:101420140]C	9	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=507872:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_101405501_101430501_15C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:8:0:-9.824:16.5
9	101420140	507872:2	A	A[9:101419834[	9	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=507872:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_101405501_101430501_15C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:8:0:-9.824:16.5
9	101681697	508021:1	T	T[9:101682446[	99	PASS	EVDNC=ASSMB;HOMSEQ=GAATATATCCCTATTCTT;MAPQ=60;MATEID=508021:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101675001_101700001_19C;SPAN=749;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:22:11.4:125.4,11.4,0:41:0:-125.4:125.4
9	101682446	508021:2	G	]9:101681697]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GAATATATCCCTATTCTT;MAPQ=60;MATEID=508021:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101675001_101700001_19C;SPAN=749;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:22:11.4:125.4,11.4,0:41:0:-125.4:125.4
9	101898793	508069:1	A	A[9:101905675[	79	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=508069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101895501_101920501_47C;SPAN=6882;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:26:0:-81.69:81.69
9	101905675	508069:2	G	]9:101898793]G	79	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=508069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101895501_101920501_47C;SPAN=6882;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:26:0:-81.69:81.69
9	102716959	508265:1	T	]9:102730923]T	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=508265:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_102728501_102753501_236C;SPAN=13964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:9:9:-36.29:36.29
9	102730923	508265:2	G	G[9:102716959[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=508265:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_102728501_102753501_236C;SPAN=13964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:9:9:-36.29:36.29
9	103806086	508606:1	T	T[9:103807448[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=508606:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:103806086(+)-9:103807448(-)__9_103782001_103807001D;SPAN=1362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
9	103807448	508606:2	A	]9:103806086]A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=508606:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:103806086(+)-9:103807448(-)__9_103782001_103807001D;SPAN=1362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
9	104334655	508742:1	G	G[9:104335428[	17	PASS	EVDNC=ASSMB;INSERTION=AATTTATTATCTA;MAPQ=60;MATEID=508742:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104321001_104346001_28C;SPAN=773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:44:17.3:17.3,0,93.2:9:0:-17.34:20.33
9	104335428	508742:2	T	]9:104334655]T	17	PASS	EVDNC=ASSMB;INSERTION=AATTTATTATCTA;MAPQ=60;MATEID=508742:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104321001_104346001_28C;SPAN=773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:44:17.3:17.3,0,93.2:9:0:-17.34:20.33
9	104600936	508836:1	T	]9:104607160]T	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTAATTTCTTGAAATAAGAAGAAAAATTCTTATTTCCTCCT;MAPQ=60;MATEID=508836:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_104590501_104615501_30C;SPAN=6224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:34:36.8:46.7,0,36.8:13:5:-46.59:46.59
9	104607160	508836:2	T	T[9:104600936[	46	PASS	DISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=TCTAATTTCTTGAAATAAGAAGAAAAATTCTTATTTCCTCCT;MAPQ=60;MATEID=508836:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_104590501_104615501_30C;SPAN=6224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:34:36.8:46.7,0,36.8:13:5:-46.59:46.59
9	104638707	508859:1	T	T[9:104639007[	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAATCCTCCTT;MAPQ=60;MATEID=508859:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_104615001_104640001_147C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:12:6:-46.5:46.5
9	104639007	508859:2	A	]9:104638707]A	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAATCCTCCTT;MAPQ=60;MATEID=508859:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_104615001_104640001_147C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:12:6:-46.5:46.5
9	104854285	508919:2	T	[1:109194083[T	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGTCTCCAGGACATTTTTGTATA;MAPQ=60;MATEID=508919:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104835501_104860501_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:12:10:-45.49:45.49
9	105054371	509026:1	T	[9:105055067[T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=ACATACATAACTAGA;MAPQ=60;MATEID=509026:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_105031501_105056501_7C;SPAN=696;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:62:15.8:137.9,0,15.8:31:30:-143:143
9	105055067	509026:2	C	[9:105054371[C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=ACATACATAACTAGA;MAPQ=60;MATEID=509026:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_105031501_105056501_7C;SPAN=696;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:62:15.8:137.9,0,15.8:31:30:-143:143
9	106261848	509449:1	T	T[9:106262147[	75	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAAACCTT;MAPQ=60;MATEID=509449:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_106256501_106281501_16C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:25:6.9:75.9,6.9,0:25:0:-75.92:75.92
9	106262147	509449:2	A	]9:106261848]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAAACCTT;MAPQ=60;MATEID=509449:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_106256501_106281501_16C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:25:6.9:75.9,6.9,0:25:0:-75.92:75.92
9	106788574	509629:2	C	C[4:170678003[	20	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=509629:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:170678003(-)-9:106788574(+)__9_106771001_106796001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
9	107177389	509734:2	T	T]9:89854059]	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=509734:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107163001_107188001_56C;SPAN=17323330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:9:4:-27.41:27.41
9	107182828	760282:1	A	A[16:31371775[	24	PASS	EVDNC=ASSMB;INSERTION=TATATACATTAAACAA;MAPQ=60;MATEID=760282:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_31360001_31385001_63C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
9	107256005	509779:1	T	T[9:107258568[	99	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATCTT;MAPQ=60;MATEID=509779:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_9_107236501_107261501_40C;SPAN=2563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:67:34.1:133.1,0,34.1:46:0:-136.1:136.1
9	107258568	509779:2	A	]9:107256005]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATCTT;MAPQ=60;MATEID=509779:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_9_107236501_107261501_40C;SPAN=2563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:67:34.1:133.1,0,34.1:46:0:-136.1:136.1
9	107271163	509785:1	T	T[9:107273174[	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=509785:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107261001_107286001_70C;SPAN=2011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:33:9:99,9,0:32:0:-99.02:99.02
9	107273174	509785:2	A	]9:107271163]A	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=509785:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107261001_107286001_70C;SPAN=2011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:33:9:99,9,0:32:0:-99.02:99.02
9	107775254	509965:1	A	A[9:107778315[	89	PASS	EVDNC=ASSMB;HOMSEQ=TAAAAATATTTTGTA;MAPQ=60;MATEID=509965:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_9_107775501_107800501_26C;SPAN=3061;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12
9	107778315	509965:2	T	]9:107775254]T	89	PASS	EVDNC=ASSMB;HOMSEQ=TAAAAATATTTTGTA;MAPQ=60;MATEID=509965:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_9_107775501_107800501_26C;SPAN=3061;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12
9	108352880	427922:2	T	[7:134739891[T	26	PASS	DISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=TAAAATTATG;MAPQ=60;MATEID=427922:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_134725501_134750501_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:8:2:-26.41:26.41
9	109410883	510495:2	G	]8:103833107]G	32	PASS	EVDNC=ASSMB;INSERTION=GCATTTTTT;MAPQ=60;MATEID=510495:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_109392501_109417501_62C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
9	109523566	510532:1	A	]9:109524282]A	91	PASS	EVDNC=ASSMB;INSERTION=TGA;MAPQ=60;MATEID=510532:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_109515001_109540001_9C;SPAN=716;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:38:2.6:91.7,0,2.6:31:0:-96.48:96.48
9	109524282	510532:2	C	C[9:109523566[	91	PASS	EVDNC=ASSMB;INSERTION=TGA;MAPQ=60;MATEID=510532:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_109515001_109540001_9C;SPAN=716;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:38:2.6:91.7,0,2.6:31:0:-96.48:96.48
9	111642641	511441:2	A	A[2:130210907[	42	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=511441:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_111622001_111647001_71C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:15:2:-43.34:43.34
9	112100475	321578:2	C	C]5:179299294]	42	PASS	DISC_MAPQ=10;EVDNC=ASDIS;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=31;MATEID=321578:1;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_5_179291001_179316001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:12:2:-42.91:42.91
9	112140079	511668:1	G	G[9:112140378[	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATACAAAAATTG;MAPQ=60;MATEID=511668:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_112136501_112161501_10C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
9	112140378	511668:2	A	]9:112140079]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATACAAAAATTG;MAPQ=60;MATEID=511668:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_112136501_112161501_10C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
9	113174817	512193:1	A	A[9:113175100[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGCTAGGGAA;MAPQ=60;MATEID=512193:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_113165501_113190501_64C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:27:9.6:105.6,9.6,0:35:0:-105.6:105.6
9	113175100	512193:2	A	]9:113174817]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGCTAGGGAA;MAPQ=60;MATEID=512193:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_113165501_113190501_64C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:27:9.6:105.6,9.6,0:35:0:-105.6:105.6
9	115473327	513034:1	G	G[9:115478586[	58	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=513034:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:115473327(+)-9:115478586(-)__9_115468501_115493501D;SPAN=5259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:40:41.6:58.1,0,41.6:0:21:-58.2:58.2
9	115478586	513034:2	C	]9:115473327]C	58	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=513034:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:115473327(+)-9:115478586(-)__9_115468501_115493501D;SPAN=5259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:40:41.6:58.1,0,41.6:0:21:-58.2:58.2
9	116620017	513469:1	A	A[9:116895019[	29	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=513469:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116889501_116914501_6C;SPAN=275002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
9	116714798	513418:1	G	G[9:116715119[	52	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATCATGTGAG;MAPQ=60;MATEID=513418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116693501_116718501_2C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
9	116715119	513418:2	A	]9:116714798]A	52	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATCATGTGAG;MAPQ=60;MATEID=513418:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116693501_116718501_2C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
9	116756723	513444:1	C	C[9:116882005[	69	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=513444:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_116742501_116767501_27C;SPAN=125282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:8:6.3:69.3,6.3,0:23:0:-69.32:69.32
9	116773796	513457:1	A	A[9:116820072[	39	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=513457:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_116816001_116841001_30C;SPAN=46276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:3:3.6:39.6,3.6,0:13:0:-39.61:39.61
9	116820072	513457:2	A	]9:116773796]A	39	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=513457:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_116816001_116841001_30C;SPAN=46276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:3:3.6:39.6,3.6,0:13:0:-39.61:39.61
9	116882005	513444:2	C	]9:116756723]C	69	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=513444:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_116742501_116767501_27C;SPAN=125282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:8:6.3:69.3,6.3,0:23:0:-69.32:69.32
9	116895019	513469:2	A	]9:116620017]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=513469:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116889501_116914501_6C;SPAN=275002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
9	117057123	513582:1	G	]9:117100182]G	41	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=513582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_117085501_117110501_29C;SPAN=43059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
9	117100182	513582:2	G	G[9:117057123[	41	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=513582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_117085501_117110501_29C;SPAN=43059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
9	117377297	723297:1	T	[15:29700693[T	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=723297:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_29694001_29719001_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:6:8:-39.61:39.61
9	118242011	513972:1	C	]9:118247603]C	17	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=513972:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:118242011(-)-9:118247603(+)__9_118237001_118262001D;SPAN=5592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:46:17:17,0,96.2:0:9:-16.78:20.14
9	118247603	513972:2	A	A[9:118242011[	17	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=513972:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:118242011(-)-9:118247603(+)__9_118237001_118262001D;SPAN=5592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:46:17:17,0,96.2:0:9:-16.78:20.14
9	119030599	514253:1	T	T[9:119031168[	13	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=514253:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119021001_119046001_3C;SPAN=569;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
9	119031168	514253:2	T	]9:119030599]T	13	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=514253:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119021001_119046001_3C;SPAN=569;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
9	119769567	514485:1	C	C[9:119769875[	72	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATTGC;MAPQ=60;MATEID=514485:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119756001_119781001_19C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
9	119769875	514485:2	A	]9:119769567]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATTGC;MAPQ=60;MATEID=514485:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119756001_119781001_19C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
9	119887340	748564:1	T	]16:909933]T	32	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=748564:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_906501_931501_32C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
9	120805084	514776:2	A	[4:169821466[A	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=514776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120785001_120810001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:6:3:-21.56:22.23
9	120805215	266207:2	G	G]4:169866444]	25	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=266207:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_169858501_169883501_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:4:6:-25.35:25.35
9	120965446	514833:1	G	G[9:120965847[	18	PASS	EVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=514833:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120956501_120981501_77C;SPAN=401;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65
9	120965847	514833:2	C	]9:120965446]C	18	PASS	EVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=514833:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120956501_120981501_77C;SPAN=401;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65
9	121464631	514986:1	A	]9:121465541]A	49	PASS	EVDNC=ASSMB;INSERTION=AAACA;MAPQ=60;MATEID=514986:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_121446501_121471501_60C;SPAN=910;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:47:49.7:49.7,0,66.2:19:0:-49.51:49.68
9	121465541	514986:2	A	A[9:121464631[	49	PASS	EVDNC=ASSMB;INSERTION=AAACA;MAPQ=60;MATEID=514986:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_121446501_121471501_60C;SPAN=910;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:47:49.7:49.7,0,66.2:19:0:-49.51:49.68
9	122576590	864265:1	G	]20:15095882]G	29	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=864265:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15092001_15117001_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:10:0:-29.71:29.71
9	122577102	864334:1	A	A[20:15405783[	39	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=864334:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15386001_15411001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61
9	123223155	515633:1	C	]9:123448482]C	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=515633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_123431001_123456001_31C;SPAN=225327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43
9	123383698	515665:1	G	]9:123559605]G	24	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=515665:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:123383698(-)-9:123559605(+)__9_123553501_123578501D;SPAN=175907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
9	123448482	515633:2	G	G[9:123223155[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=515633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_123431001_123456001_31C;SPAN=225327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43
9	123559605	515665:2	T	T[9:123383698[	24	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=515665:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:123383698(-)-9:123559605(+)__9_123553501_123578501D;SPAN=175907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
9	124441172	516013:1	C	]9:124656822]C	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=516013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_124656001_124681001_23C;SPAN=215650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:4:7:-22.25:22.25
9	124656822	516013:2	A	A[9:124441172[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=516013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_124656001_124681001_23C;SPAN=215650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:4:7:-22.25:22.25
9	125123053	836323:1	C	[18:74044264[C	46	PASS	DISC_MAPQ=41;EVDNC=ASDIS;INSERTION=AGATA;MAPQ=60;MATEID=836323:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_18_74039001_74064001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:12:4:-46.21:46.21
9	125123230	836324:1	G	G]18:74044279]	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=836324:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_18_74039001_74064001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:15:6:-56.11:56.11
9	125174450	516187:2	T	]9:88370788]T	53	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=516187:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_111C;SPAN=36803662;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
9	125174450	516185:2	T	T[9:88370208[	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=516185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_40C;SPAN=36804242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66
9	128138847	517175:1	C	C[9:128139780[	85	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=GGTAAGAGGGGCTGGCTCTCAGTCCC;MAPQ=60;MATEID=517175:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_9_128135001_128160001_33C;SPAN=933;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:15:15:-85.82:85.82
9	128139780	517175:2	G	]9:128138847]G	85	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGTAAGAGGGGCTGGCTCTCAGTCCC;MAPQ=60;MATEID=517175:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_9_128135001_128160001_33C;SPAN=933;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:15:15:-85.82:85.82
9	128649826	517321:1	C	C[9:128651644[	29	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=517321:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:128649826(+)-9:128651644(-)__9_128649501_128674501D;SPAN=1818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	128651644	517321:2	G	]9:128649826]G	29	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=517321:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:128649826(+)-9:128651644(-)__9_128649501_128674501D;SPAN=1818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	128694869	517334:2	T	T[2:115619092[	27	PASS	EVDNC=ASSMB;HOMSEQ=GTCTCT;MAPQ=60;MATEID=517334:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_9_128674001_128699001_56C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77
9	128696493	517337:2	A	A]2:115619217]	48	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=517337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:115619217(+)-9:128696493(+)__9_128674001_128699001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:0:17:-48.77:48.77
9	128801967	517379:1	T	T[9:128802259[	33	PASS	EVDNC=ASSMB;HOMSEQ=TGTT;MAPQ=60;MATEID=517379:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_128796501_128821501_18C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
9	128802259	517379:2	T	]9:128801967]T	33	PASS	EVDNC=ASSMB;HOMSEQ=TGTT;MAPQ=60;MATEID=517379:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_128796501_128821501_18C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
9	128938673	517440:1	T	T[9:128939830[	99	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTCCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCT;MAPQ=60;MATEID=517440:2;MATENM=7;NM=4;NUMPARTS=2;SCTG=c_9_128919001_128944001_27C;SPAN=1157;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:6:12.6:138.6,12.6,0:10:38:-138.6:138.6
9	128939830	517440:2	T	]9:128938673]T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTCCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCT;MAPQ=60;MATEID=517440:1;MATENM=4;NM=7;NUMPARTS=2;SCTG=c_9_128919001_128944001_27C;SPAN=1157;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:6:12.6:138.6,12.6,0:10:38:-138.6:138.6
9	129264421	517552:1	T	T[9:129265791[	22	PASS	EVDNC=ASSMB;HOMSEQ=GCTGGGATTACAGGT;MAPQ=60;MATEID=517552:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_129262001_129287001_128C;SPAN=1370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
9	129265791	517552:2	G	]9:129264421]G	22	PASS	EVDNC=ASSMB;HOMSEQ=GCTGGGATTACAGGT;MAPQ=60;MATEID=517552:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_129262001_129287001_128C;SPAN=1370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
9	129396438	517595:1	G	]9:129397012]G	69	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=517595:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:129396438(-)-9:129397012(+)__9_129384501_129409501D;SPAN=574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:47:46.4:69.5,0,46.4:0:25:-69.5:69.5
9	129397012	517595:2	G	G[9:129396438[	69	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=517595:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:129396438(-)-9:129397012(+)__9_129384501_129409501D;SPAN=574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:47:46.4:69.5,0,46.4:0:25:-69.5:69.5
9	129410470	517627:1	A	A[Un_JTFH01001474v1_decoy:1[	7	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCAGCATCACCACCAACATCACAACCACCATCA;MAPQ=60;MATEID=517627:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=CACCAC;SCTG=c_9_129409001_129434001_82C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:56:7.8:7.8,0,96.2:9:0:-7.677:13.03
9	129435079	517695:1	T	T[9:129435408[	50	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGTCCTGT;MAPQ=60;MATEID=517695:2;MATENM=0;NM=38;NUMPARTS=3;REPSEQ=TTTTT;SCTG=c_9_129433501_129458501_42C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:45:50.3:50.3,0,50.3:17:8:-50.35:50.35
9	129435408	517695:2	G	]9:129435079]G	50	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGTCCTGT;MAPQ=60;MATEID=517695:1;MATENM=38;NM=0;NUMPARTS=3;REPSEQ=TTTTT;SCTG=c_9_129433501_129458501_42C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:45:50.3:50.3,0,50.3:17:8:-50.35:50.35
9	129864461	518089:1	C	C[9:130112446[	46	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=518089:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_130095001_130120001_5C;SPAN=247985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21
9	130112446	518089:2	C	]9:129864461]C	46	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=518089:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_130095001_130120001_5C;SPAN=247985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21
9	130197644	518152:1	A	]9:130221959]A	39	PASS	DISC_MAPQ=49;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=518152:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_130217501_130242501_98C;SPAN=24315;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:8:10:-40.41:40.41
9	130221959	518152:2	A	A[9:130197644[	39	PASS	DISC_MAPQ=40;EVDNC=ASDIS;INSERTION=T;MAPQ=0;MATEID=518152:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_130217501_130242501_98C;SPAN=24315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:8:10:-40.41:40.41
9	130268363	518192:1	C	C[9:130272523[	51	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=518192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_130266501_130291501_32C;SPAN=4160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:29:21.5:51.2,0,21.5:18:0:-51.92:51.92
9	130272523	518192:2	G	]9:130268363]G	51	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=518192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_130266501_130291501_32C;SPAN=4160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:29:21.5:51.2,0,21.5:18:0:-51.92:51.92
9	130392964	518254:2	C	C]3:11599603]	49	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTC;MAPQ=19;MATEID=518254:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_9_130389001_130414001_29C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:9:12:-49.51:49.51
9	131371843	518653:1	T	]9:131372761]T	0	PASS	EVDNC=ASSMB;HOMSEQ=TCGCCC;MAPQ=60;MATEID=518653:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_131369001_131394001_55C;SPAN=918;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:46:0.5:0.5,0,112.7:4:0:-0.2738:7.434
9	131372761	518653:2	C	C[9:131371843[	0	PASS	EVDNC=ASSMB;HOMSEQ=TCGCCC;MAPQ=60;MATEID=518653:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_131369001_131394001_55C;SPAN=918;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:46:0.5:0.5,0,112.7:4:0:-0.2738:7.434
9	132787337	519162:1	A	]9:132845611]A	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=519162:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_132839001_132864001_5C;SPAN=58274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
9	132845611	519162:2	T	T[9:132787337[	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=519162:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_132839001_132864001_5C;SPAN=58274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
9	133548994	519435:1	T	T[9:133549304[	59	PASS	EVDNC=ASSMB;HOMSEQ=CACAGTTTCCTTCTT;MAPQ=60;MATEID=519435:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_133525001_133550001_22C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41
9	133549304	519435:2	C	]9:133548994]C	59	PASS	EVDNC=ASSMB;HOMSEQ=CACAGTTTCCTTCTT;MAPQ=60;MATEID=519435:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_133525001_133550001_22C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41
9	134394166	999384:1	G	G]Un_JTFH01000871v1_decoy:1074]	62	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACCACCATCACCAACATCATCA;MAPQ=60;MATEID=999384:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_1714_1_1074_7C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:7:5.7:62.7,5.7,0:21:0:-62.72:62.72
9	134684963	519904:1	C	]9:134685497]C	46	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=519904:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:134684963(-)-9:134685497(+)__9_134676501_134701501D;SPAN=534;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:48:46.1:46.1,0,72.5:0:18:-45.93:46.31
9	134685497	519904:2	C	C[9:134684963[	46	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=519904:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:134684963(-)-9:134685497(+)__9_134676501_134701501D;SPAN=534;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:48:46.1:46.1,0,72.5:0:18:-45.93:46.31
9	135119029	520085:1	C	]9:135119480]C	26	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CTCACTGGATCTTTGGAAGTGCTCACTGGGTCTTTGGAAGTGCTCAC;MAPQ=60;MATEID=520085:2;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_9_135117501_135142501_33C;SPAN=451;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:61:26:26,0,125:7:6:-25.77:29.63
9	135119480	520085:2	C	C[9:135119029[	26	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CTCACTGGATCTTTGGAAGTGCTCACTGGGTCTTTGGAAGTGCTCAC;MAPQ=60;MATEID=520085:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_9_135117501_135142501_33C;SPAN=451;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:61:26:26,0,125:7:6:-25.77:29.63
9	135322220	520184:1	A	A[9:135325758[	62	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=520184:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135313501_135338501_125C;SPAN=3538;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21
9	135325758	520184:2	T	]9:135322220]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=520184:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135313501_135338501_125C;SPAN=3538;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21
9	135350173	520212:1	C	]Un_KN707757v1_decoy:3034]C	17	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=520212:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135338001_135363001_35C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:7:0:-17.77:17.94
9	135350252	988641:1	T	T[Un_KN707757v1_decoy:1[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988641:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_608_1_3034_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:4:4.2:46.2,4.2,0:16:0:-46.21:46.21
9	135350252	520213:1	T	T[Un_KN707757v1_decoy:1[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=520213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135338001_135363001_41C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21
9	135587257	520316:1	C	C[9:135588354[	99	PASS	EVDNC=ASSMB;HOMSEQ=GGC;MAPQ=60;MATEID=520316:2;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_9_135583001_135608001_28C;SPAN=1097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:18:9.9:108.9,9.9,0:36:0:-108.9:108.9
9	135588354	520316:2	G	]9:135587257]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GGC;MAPQ=60;MATEID=520316:1;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_9_135583001_135608001_28C;SPAN=1097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:18:9.9:108.9,9.9,0:36:0:-108.9:108.9
9	136772879	520714:1	A	A[9:136782783[	38	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=520714:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_136759001_136784001_89C;SPAN=9904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
9	136782783	520714:2	A	]9:136772879]A	38	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=520714:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_136759001_136784001_89C;SPAN=9904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
9	137359057	521016:1	C	C[9:137361528[	82	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TCGATCTCCTGACCTCGT;INSERTION=GATCCGTCCGCCTCGGCCTT;MAPQ=60;MATEID=521016:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_9_137347001_137372001_0C;SPAN=2471;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:5:7.5:82.5,7.5,0:23:8:-82.52:82.52
9	137361528	521016:2	A	]9:137359057]A	82	PASS	DISC_MAPQ=46;EVDNC=TSI_G;HOMSEQ=TCGATCTCCTGACCTCGT;INSERTION=GATCCGTCCGCCTCGGCCTT;MAPQ=60;MATEID=521016:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_9_137347001_137372001_0C;SPAN=2471;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:5:7.5:82.5,7.5,0:23:8:-82.52:82.52
9	137506126	521125:1	C	]9:137559807]C	99	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=521125:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_26C;SPAN=53681;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:23:10.2:112.2,10.2,0:24:26:-112.2:112.2
9	137529033	521126:1	T	T[9:137547812[	19	PASS	EVDNC=ASSMB;HOMSEQ=CTCT;MAPQ=60;MATEID=521126:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_36C;SPAN=18779;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23
9	137546395	521158:1	C	]9:137681397]C	34	PASS	DISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=521158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137665501_137690501_62C;SPAN=135002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:9:9:-33.92:34.03
9	137547812	521126:2	C	]9:137529033]C	19	PASS	EVDNC=ASSMB;HOMSEQ=CTCT;MAPQ=60;MATEID=521126:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_36C;SPAN=18779;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23
9	137559807	521125:2	C	C[9:137506126[	99	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=521125:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_26C;SPAN=53681;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:23:10.2:112.2,10.2,0:24:26:-112.2:112.2
9	137681397	521158:2	T	T[9:137546395[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137665501_137690501_62C;SPAN=135002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:9:9:-33.92:34.03
9	137888932	521254:1	G	G[9:137890829[	57	PASS	DISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=19;MATEID=521254:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137886001_137911001_34C;SPAN=1897;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:31:17.9:57.5,0,17.9:12:10:-58.24:58.24
9	137890829	521254:2	G	]9:137888932]G	57	PASS	DISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=521254:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137886001_137911001_34C;SPAN=1897;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:31:17.9:57.5,0,17.9:12:10:-58.24:58.24
9	138145282	521500:1	G	[10:79032[G	18	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=521500:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:138145282(-)-10:79032(-)__10_73501_98501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
10	79032	521500:2	T	[9:138145282[T	18	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=521500:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:138145282(-)-10:79032(-)__10_73501_98501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
10	337269	521638:1	T	]10:337797]T	35	PASS	DISC_MAPQ=33;EVDNC=ASDIS;HOMSEQ=TGTGTGTGTG;MAPQ=60;MATEID=521638:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_318501_343501_61C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:52:35:35,0,94.4:13:2:-34.9:36.48
10	337797	521638:2	G	G[10:337269[	35	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=TGTGTGTGTG;MAPQ=33;MATEID=521638:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_318501_343501_61C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:52:35:35,0,94.4:13:2:-34.9:36.48
10	367969	521652:1	C	C[10:368184[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCTGCACAGCCCCAGGTGCCTC;MAPQ=60;MATEID=521652:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_367501_392501_24C;SPAN=215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:19:5.1:56.1,5.1,0:12:8:-56.11:56.11
10	368184	521652:2	C	]10:367969]C	56	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCTGCACAGCCCCAGGTGCCTC;MAPQ=60;MATEID=521652:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_367501_392501_24C;SPAN=215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:19:5.1:56.1,5.1,0:12:8:-56.11:56.11
10	417653	521681:1	C	C[10:418146[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCCTGTGCCTGTCGGCTCAAATAGGCCTCCCTGTCTGCCTGCG;MAPQ=16;MATEID=521681:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_416501_441501_19C;SPAN=493;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:51:33:14.1:155.1,14.1,0:49:7:-155.1:155.1
10	418146	521681:2	C	]10:417653]C	99	PASS	DISC_MAPQ=36;EVDNC=ASDIS;INSERTION=GCCTGTGCCTGTCGGCTCAAATAGGCCTCCCTGTCTGCCTGCG;MAPQ=60;MATEID=521681:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_416501_441501_19C;SPAN=493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:51:33:14.1:155.1,14.1,0:49:7:-155.1:155.1
10	846157	521947:1	A	]10:1048151]A	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521947:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_1029001_1054001_64C;SPAN=201994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:9:10:-31.74:31.78
10	1048151	521947:2	G	G[10:846157[	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521947:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_1029001_1054001_64C;SPAN=201994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:9:10:-31.74:31.78
10	1174091	522022:1	T	]10:1174299]T	8	PASS	EVDNC=ASSMB;HOMSEQ=TCAGGACAGAGATGGGTGTATGTGGTCTA;MAPQ=60;MATEID=522022:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_10_1151501_1176501_99C;SPAN=208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:75:8.6:8.6,0,180.2:9:0:-8.627:18.06
10	1174299	522022:2	A	A[10:1174091[	8	PASS	EVDNC=ASSMB;HOMSEQ=TCAGGACAGAGATGGGTGTATGTGGTCTA;MAPQ=60;MATEID=522022:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_10_1151501_1176501_99C;SPAN=208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:75:8.6:8.6,0,180.2:9:0:-8.627:18.06
10	2256296	522628:1	G	G[10:2257474[	50	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=522628:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_2254001_2279001_146C;SPAN=1178;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
10	2257474	522628:2	A	]10:2256296]A	50	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=522628:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_2254001_2279001_146C;SPAN=1178;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
10	3040693	730799:1	G	G]15:53117362]	42	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=730799:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:3040693(+)-15:53117362(+)__15_53116001_53141001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:2:3.9:42.9,3.9,0:0:14:-42.91:42.91
10	3242279	523212:1	T	]10:3242421]T	85	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTGT;MAPQ=60;MATEID=523212:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_3234001_3259001_109C;SPAN=142;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:72:85.4:85.4,0,95.3:32:0:-85.39:85.43
10	3242421	523212:2	T	T[10:3242279[	85	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTGT;MAPQ=60;MATEID=523212:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_3234001_3259001_109C;SPAN=142;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:72:85.4:85.4,0,95.3:32:0:-85.39:85.43
10	4247987	523750:1	T	T[10:4249489[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=523750:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:4247987(+)-10:4249489(-)__10_4238501_4263501D;SPAN=1502;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:13:14.7:161.7,14.7,0:0:53:-161.7:161.7
10	4249489	523750:2	C	]10:4247987]C	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=523750:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:4247987(+)-10:4249489(-)__10_4238501_4263501D;SPAN=1502;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:13:14.7:161.7,14.7,0:0:53:-161.7:161.7
10	4592619	523879:1	A	A[10:4592929[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAAGA;MAPQ=60;MATEID=523879:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_4581501_4606501_146C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:43:15:165,15,0:54:0:-165:165
10	4592929	523879:2	A	]10:4592619]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAAGA;MAPQ=60;MATEID=523879:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_4581501_4606501_146C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:43:15:165,15,0:54:0:-165:165
10	4666326	523910:1	T	T[10:4668331[	99	PASS	EVDNC=ASSMB;INSERTION=ATAG;MAPQ=60;MATEID=523910:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_4655001_4680001_55C;SPAN=2005;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:20:10.5:115.5,10.5,0:38:0:-115.5:115.5
10	4668331	523910:2	T	]10:4666326]T	99	PASS	EVDNC=ASSMB;INSERTION=ATAG;MAPQ=60;MATEID=523910:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_4655001_4680001_55C;SPAN=2005;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:20:10.5:115.5,10.5,0:38:0:-115.5:115.5
10	5169108	524180:1	C	[Un_JTFH01001594v1_decoy:1[C	36	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AAAGACAGCTCAGGCACAGGGGGAGGTGCGG;MAPQ=52;MATEID=524180:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=GG;SCTG=c_10_5169501_5194501_110C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:0:3.3:36.3,3.3,0:12:0:-36.31:36.31
10	5245354	524219:1	T	T[10:5251383[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAATAGTGTAAAGT;MAPQ=60;MATEID=524219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_5243001_5268001_23C;SPAN=6029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:40:4.5:108.9,4.5,0:35:0:-111.7:111.7
10	5251383	524219:2	A	]10:5245354]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAATAGTGTAAAGT;MAPQ=60;MATEID=524219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_5243001_5268001_23C;SPAN=6029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:40:4.5:108.9,4.5,0:35:0:-111.7:111.7
10	6210012	524800:1	A	A[10:6210952[	65	PASS	EVDNC=ASSMB;HOMSEQ=CCCGCCTCGGCCTCCCA;MAPQ=60;MATEID=524800:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6198501_6223501_10C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82
10	6210952	524800:2	C	]10:6210012]C	65	PASS	EVDNC=ASSMB;HOMSEQ=CCCGCCTCGGCCTCCCA;MAPQ=60;MATEID=524800:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6198501_6223501_10C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82
10	6369618	524908:1	T	T[10:6375668[	95	PASS	EVDNC=ASSMB;HOMSEQ=CAGCAAATCATTTTCCT;MAPQ=60;MATEID=524908:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_6345501_6370501_53C;SPAN=6050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94
10	6375668	524908:2	C	]10:6369618]C	95	PASS	EVDNC=ASSMB;HOMSEQ=CAGCAAATCATTTTCCT;MAPQ=60;MATEID=524908:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_6345501_6370501_53C;SPAN=6050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94
10	6894560	525248:1	A	]10:6894663]A	99	PASS	EVDNC=ASSMB;INSERTION=GCATGGTATGGAGTAGCAGTTTCCAGCATACTGCATGGTATGGAGTAGCAGTTTCA;MAPQ=60;MATEID=525248:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6884501_6909501_96C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:52:169:99:124.4,0,299.3:52:0:-124.1:128.2
10	6894663	525248:2	T	T[10:6894560[	99	PASS	EVDNC=ASSMB;INSERTION=GCATGGTATGGAGTAGCAGTTTCCAGCATACTGCATGGTATGGAGTAGCAGTTTCA;MAPQ=60;MATEID=525248:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6884501_6909501_96C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:52:169:99:124.4,0,299.3:52:0:-124.1:128.2
10	7035078	525336:1	T	T[10:7036340[	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=525336:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_7031501_7056501_19C;SPAN=1262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:26:13.5:148.5,13.5,0:49:0:-148.5:148.5
10	7036340	525336:2	C	]10:7035078]C	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=525336:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_7031501_7056501_19C;SPAN=1262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:26:13.5:148.5,13.5,0:49:0:-148.5:148.5
10	7526497	525537:1	T	]10:7527082]T	46	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=525537:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7526497(-)-10:7527082(+)__10_7521501_7546501D;SPAN=585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:47:46.4:46.4,0,69.5:0:18:-46.21:46.52
10	7527082	525537:2	C	C[10:7526497[	46	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=525537:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7526497(-)-10:7527082(+)__10_7521501_7546501D;SPAN=585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:47:46.4:46.4,0,69.5:0:18:-46.21:46.52
10	7751867	525705:1	G	G[10:7752076[	74	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGTAACGATG;MAPQ=60;MATEID=525705:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_7742001_7767001_8C;SPAN=209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:31:1.4:74,0,1.4:25:0:-77.51:77.51
10	7752076	525705:2	A	]10:7751867]A	74	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGTAACGATG;MAPQ=60;MATEID=525705:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_7742001_7767001_8C;SPAN=209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:31:1.4:74,0,1.4:25:0:-77.51:77.51
10	7819172	525836:1	T	[10:7999791[T	53	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=CAATGCAGGGGCTCAGGCTGGTCAACAGAGCT;MAPQ=60;MATEID=525836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_7987001_8012001_49C;SPAN=180619;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:32:24.2:53.9,0,24.2:11:15:-54.21:54.21
10	7953950	525815:1	T	T[10:7954929[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=525815:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7953950(+)-10:7954929(-)__10_7938001_7963001D;SPAN=979;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:0:35:-105.6:105.6
10	7954929	525815:2	A	]10:7953950]A	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=525815:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7953950(+)-10:7954929(-)__10_7938001_7963001D;SPAN=979;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:0:35:-105.6:105.6
10	7998109	525843:1	T	T]10:8023057]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=525843:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7998109(+)-10:8023057(+)__10_7987001_8012001D;SPAN=24948;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
10	7999791	525836:2	T	[10:7819172[T	53	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=CAATGCAGGGGCTCAGGCTGGTCAACAGAGCT;MAPQ=60;MATEID=525836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_7987001_8012001_49C;SPAN=180619;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:32:24.2:53.9,0,24.2:11:15:-54.21:54.21
10	8023057	525843:2	T	T]10:7998109]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=525843:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7998109(+)-10:8023057(+)__10_7987001_8012001D;SPAN=24948;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
10	8436075	526239:1	A	]10:8535177]A	28	PASS	EVDNC=ASSMB;INSERTION=TAC;MAPQ=60;MATEID=526239:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_8526001_8551001_176C;SPAN=99102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58
10	8535177	526239:2	A	A[10:8436075[	28	PASS	EVDNC=ASSMB;INSERTION=TAC;MAPQ=60;MATEID=526239:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_8526001_8551001_176C;SPAN=99102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58
10	8740029	526412:1	T	T[10:8740345[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTTAGTTTTCTTT;MAPQ=60;MATEID=526412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_8722001_8747001_74C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:33:10.2:112.2,10.2,0:26:12:-112.2:112.2
10	8740345	526412:2	G	]10:8740029]G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTTAGTTTTCTTT;MAPQ=60;MATEID=526412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_8722001_8747001_74C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:33:10.2:112.2,10.2,0:26:12:-112.2:112.2
10	9081206	526682:1	A	]10:9240096]A	11	PASS	EVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=526682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_9065001_9090001_1C;SPAN=158890;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:43:11:11,0,96.8:7:0:-11.02:15.04
10	9240096	526682:2	A	A[10:9081206[	11	PASS	EVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=526682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_9065001_9090001_1C;SPAN=158890;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:43:11:11,0,96.8:7:0:-11.02:15.04
10	11283839	527473:1	A	]10:11284626]A	32	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=527473:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:11283839(-)-10:11284626(+)__10_11270001_11295001D;SPAN=787;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:50:32.3:32.3,0,91.7:0:14:-32.16:33.83
10	11284626	527473:2	A	A[10:11283839[	32	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=527473:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:11283839(-)-10:11284626(+)__10_11270001_11295001D;SPAN=787;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:50:32.3:32.3,0,91.7:0:14:-32.16:33.83
10	11903434	527787:1	C	C[10:11903772[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=527787:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_11882501_11907501_27C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:27:8.4:92.4,8.4,0:24:9:-92.42:92.42
10	11903772	527787:2	G	]10:11903434]G	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=527787:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_11882501_11907501_27C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:27:8.4:92.4,8.4,0:24:9:-92.42:92.42
10	12518474	528136:1	T	T[10:12520975[	56	PASS	EVDNC=ASSMB;HOMSEQ=CTTTATTCATTCTT;MAPQ=60;MATEID=528136:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_10_12519501_12544501_2C;SPAN=2501;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11
10	12520975	528136:2	C	]10:12518474]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CTTTATTCATTCTT;MAPQ=60;MATEID=528136:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_10_12519501_12544501_2C;SPAN=2501;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11
10	13490359	528682:1	T	]10:13613251]T	52	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=528682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_13597501_13622501_37C;SPAN=122892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39
10	13613251	528682:2	G	G[10:13490359[	52	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=528682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_13597501_13622501_37C;SPAN=122892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39
10	15915313	96983:2	A	]2:90371363]A	92	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTTTTTTTTA;MAPQ=60;MATEID=96983:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_90356001_90381001_107C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:81:92.9:92.9,0,109.4:27:14:-92.77:92.86
10	18214147	530576:1	A	A[10:18214661[	40	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=530576:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_18203501_18228501_20C;SPAN=514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
10	18214661	530576:2	A	]10:18214147]A	40	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=530576:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_18203501_18228501_20C;SPAN=514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
10	19116995	530955:1	T	]10:19211610]T	39	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TGAGGCAGGATAATCGCTTGAACC;MAPQ=60;MATEID=530955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_19208001_19233001_99C;SPAN=94615;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:9:3:-39.28:39.28
10	19211610	530955:2	C	C[10:19116995[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAGGCAGGATAATCGCTTGAACC;MAPQ=60;MATEID=530955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_19208001_19233001_99C;SPAN=94615;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:9:3:-39.28:39.28
10	19321258	531031:1	T	T[10:19362086[	20	PASS	EVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=531031:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_19355001_19380001_8C;SPAN=40828;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
10	19362086	531031:2	A	]10:19321258]A	20	PASS	EVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=531031:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_19355001_19380001_8C;SPAN=40828;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
10	19707705	531188:1	T	T[10:19709146[	30	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=531188:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:19707705(+)-10:19709146(-)__10_19698001_19723001D;SPAN=1441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
10	19709146	531188:2	C	]10:19707705]C	30	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=531188:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:19707705(+)-10:19709146(-)__10_19698001_19723001D;SPAN=1441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
10	20378330	531455:1	G	G[10:20378637[	72	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATTAGTAAG;MAPQ=60;MATEID=531455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_20359501_20384501_59C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
10	20378637	531455:2	A	]10:20378330]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATTAGTAAG;MAPQ=60;MATEID=531455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_20359501_20384501_59C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
10	21689372	531851:1	T	]10:21772706]T	28	PASS	EVDNC=ASSMB;HOMSEQ=TTTC;MAPQ=60;MATEID=531851:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_21756001_21781001_41C;SPAN=83334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
10	21717820	52839:2	C	[1:197544937[C	49	PASS	DISC_MAPQ=0;EVDNC=TSI_L;INSERTION=CCCTTCTCC;MAPQ=53;MATEID=52839:1;MATENM=14;NM=0;NUMPARTS=3;REPSEQ=CC;SCTG=c_1_197543501_197568501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:8:4.5:49.5,4.5,0:15:9:-49.51:49.51
10	21772706	531851:2	C	C[10:21689372[	28	PASS	EVDNC=ASSMB;HOMSEQ=TTTC;MAPQ=60;MATEID=531851:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_21756001_21781001_41C;SPAN=83334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
10	25203596	532849:1	C	C[10:25204023[	89	PASS	DISC_MAPQ=46;EVDNC=ASDIS;INSERTION=A;MAPQ=43;MATEID=532849:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_25186001_25211001_27C;SPAN=427;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:29:8.1:89.1,8.1,0:22:12:-89.12:89.12
10	25204023	532849:2	T	]10:25203596]T	89	PASS	DISC_MAPQ=40;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=532849:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_25186001_25211001_27C;SPAN=427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:29:8.1:89.1,8.1,0:22:12:-89.12:89.12
10	26065838	533215:1	C	C[10:26066145[	21	PASS	EVDNC=ASSMB;HOMSEQ=GAGCAGTGGGC;MAPQ=60;MATEID=533215:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_26043501_26068501_3C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
10	26066145	533215:2	G	]10:26065838]G	21	PASS	EVDNC=ASSMB;HOMSEQ=GAGCAGTGGGC;MAPQ=60;MATEID=533215:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_26043501_26068501_3C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
10	26710119	533592:1	A	A[10:26713225[	92	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGGTTGCAGTGAGCCGAGATCACGCCATTGCA;MAPQ=60;MATEID=533592:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_26705001_26730001_95C;SPAN=3106;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:20:17:-92.42:92.42
10	26713225	533592:2	G	]10:26710119]G	92	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GAGGTTGCAGTGAGCCGAGATCACGCCATTGCA;MAPQ=60;MATEID=533592:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_26705001_26730001_95C;SPAN=3106;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:20:17:-92.42:92.42
10	26935274	533742:1	A	A[10:26939157[	32	PASS	EVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=533742:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_26925501_26950501_46C;SPAN=3883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:51:32:32,0,94.7:14:0:-31.88:33.69
10	26935698	533746:1	T	]10:26940472]T	20	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=533746:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:26935698(-)-10:26940472(+)__10_26925501_26950501D;SPAN=4774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:0:10:-20.36:23
10	26939157	533742:2	A	]10:26935274]A	32	PASS	EVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=533742:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_26925501_26950501_46C;SPAN=3883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:51:32:32,0,94.7:14:0:-31.88:33.69
10	26940472	533746:2	T	T[10:26935698[	20	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=533746:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:26935698(-)-10:26940472(+)__10_26925501_26950501D;SPAN=4774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:0:10:-20.36:23
10	30957818	535680:1	A	A[10:30962841[	64	PASS	EVDNC=ASSMB;INSERTION=TGTTCAA;MAPQ=60;MATEID=535680:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_30943501_30968501_17C;SPAN=5023;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69
10	30962841	535680:2	C	]10:30957818]C	64	PASS	EVDNC=ASSMB;INSERTION=TGTTCAA;MAPQ=60;MATEID=535680:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_30943501_30968501_17C;SPAN=5023;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69
10	31154439	535744:1	G	G[10:31155936[	44	PASS	EVDNC=ASSMB;HOMSEQ=TTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=535744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31139501_31164501_12C;SPAN=1497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
10	31155936	535744:2	T	]10:31154439]T	44	PASS	EVDNC=ASSMB;HOMSEQ=TTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=535744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31139501_31164501_12C;SPAN=1497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
10	31687153	535880:1	T	]10:31687467]T	14	PASS	DISC_MAPQ=4;EVDNC=TSI_L;HOMSEQ=TATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATGTATATATTTATATATACATTATTTATATATAAATATATATTTATATATACATTATATATAAATATATATTTATATATA;INSERTION=ATT;MAPQ=60;MATEID=535880:2;MATENM=29;NM=0;NUMPARTS=5;REPSEQ=ATATAT;SCTG=c_10_31678501_31703501_4C;SPAN=314;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:14.5:14.5,0,27.5:7:2:-14.35:14.66
10	31687467	535880:2	T	T[10:31687153[	14	PASS	DISC_MAPQ=15;EVDNC=TSI_L;HOMSEQ=TATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATGTATATATTTATATATACATTATTTATATATAAATATATATTTATATATACATTATATATAAATATATATTTATATATA;INSERTION=ATT;MAPQ=24;MATEID=535880:1;MATENM=0;NM=29;NUMPARTS=5;REPSEQ=ATATAT;SCTG=c_10_31678501_31703501_4C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:14.5:14.5,0,27.5:7:2:-14.35:14.66
10	31968967	535994:1	G	G[10:31971685[	54	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATATTAGTTG;MAPQ=60;MATEID=535994:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31948001_31973001_30C;SPAN=2718;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:31:21.2:54.2,0,21.2:19:0:-54.63:54.63
10	31971685	535994:2	A	]10:31968967]A	54	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATATTAGTTG;MAPQ=60;MATEID=535994:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31948001_31973001_30C;SPAN=2718;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:31:21.2:54.2,0,21.2:19:0:-54.63:54.63
10	32416809	536235:1	C	C[10:32417137[	99	PASS	EVDNC=ASSMB;HOMSEQ=ATATTCTATTC;MAPQ=60;MATEID=536235:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_32413501_32438501_52C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:25:12.6:138.6,12.6,0:46:0:-138.6:138.6
10	32417137	536235:2	A	]10:32416809]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ATATTCTATTC;MAPQ=60;MATEID=536235:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_32413501_32438501_52C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:25:12.6:138.6,12.6,0:46:0:-138.6:138.6
10	33095434	536439:1	C	]10:33095535]C	54	PASS	EVDNC=ASSMB;INSERTION=ATCA;MAPQ=60;MATEID=536439:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33075001_33100001_34C;SPAN=101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:54:54.2:54.2,0,80.6:21:0:-54.14:54.45
10	33095535	536439:2	T	T[10:33095434[	54	PASS	EVDNC=ASSMB;INSERTION=ATCA;MAPQ=60;MATEID=536439:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33075001_33100001_34C;SPAN=101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:54:54.2:54.2,0,80.6:21:0:-54.14:54.45
10	33203726	536476:1	T	T[10:33204002[	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAAAGACTGCTTTT;MAPQ=60;MATEID=536476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33197501_33222501_7C;SPAN=276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:31:8.7:95.7,8.7,0:27:7:-95.72:95.72
10	33204002	536476:2	C	]10:33203726]C	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAAAGACTGCTTTT;MAPQ=60;MATEID=536476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33197501_33222501_7C;SPAN=276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:31:8.7:95.7,8.7,0:27:7:-95.72:95.72
10	34395555	536911:1	C	C[10:34395866[	62	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAACATCATC;MAPQ=60;MATEID=536911:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_34373501_34398501_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68
10	34395866	536911:2	A	]10:34395555]A	62	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAACATCATC;MAPQ=60;MATEID=536911:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_34373501_34398501_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68
10	35304294	537250:1	A	A[10:35304609[	49	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTTTCTCCTTTTA;MAPQ=60;MATEID=537250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35304501_35329501_29C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:14:4.5:49.5,4.5,0:17:0:-49.51:49.51
10	35304609	537250:2	C	]10:35304294]C	49	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTTTCTCCTTTTA;MAPQ=60;MATEID=537250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35304501_35329501_29C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:14:4.5:49.5,4.5,0:17:0:-49.51:49.51
10	35610837	537317:1	T	]Un_JTFH01000337v1_decoy:2001]T	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=537317:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35598501_35623501_83C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
10	35859514	537512:1	A	[10:36013231[A	52	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=537512:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:35859514(-)-10:36013231(-)__10_35990501_36015501D;SPAN=153717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:0:4.8:52.8,4.8,0:0:18:-52.81:52.81
10	35930733	537494:1	G	G[10:35932139[	51	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=537494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35917001_35942001_35C;SPAN=1406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
10	35932139	537494:2	T	]10:35930733]T	51	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=537494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35917001_35942001_35C;SPAN=1406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
10	36013231	537512:2	T	[10:35859514[T	52	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=537512:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:35859514(-)-10:36013231(-)__10_35990501_36015501D;SPAN=153717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:0:4.8:52.8,4.8,0:0:18:-52.81:52.81
10	38527620	539220:1	A	A[10:38529793[	0	PASS	EVDNC=ASSMB;HOMSEQ=AATGGAATGGAATGGAATGGA;MAPQ=60;MATEID=539220:2;MATENM=3;NM=1;NUMPARTS=3;SCTG=c_10_38514001_38539001_669C;SPAN=2173;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:485:89.7:0,89.7,1400:14:0:90.12:19.18
10	38529793	539220:2	A	]10:38527620]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AATGGAATGGAATGGAATGGA;MAPQ=60;MATEID=539220:1;MATENM=1;NM=3;NUMPARTS=3;SCTG=c_10_38514001_38539001_669C;SPAN=2173;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:485:89.7:0,89.7,1400:14:0:90.12:19.18
10	38950967	541640:2	T	T]7:65499251]	27	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=541640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65499251(+)-10:38950967(+)__10_38930501_38955501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:33:27.2:27.2,0,53.6:0:11:-27.04:27.59
10	39173961	541890:1	A	A[10:39175116[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAAACTGCTTTGTGATGTGAGCATTCATCTCACAGA;MAPQ=60;MATEID=541890:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_39151001_39176001_60C;SPAN=1155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:30:8.4:92.4,8.4,0:17:16:-92.42:92.42
10	39175116	541890:2	T	]10:39173961]T	92	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAAACTGCTTTGTGATGTGAGCATTCATCTCACAGA;MAPQ=60;MATEID=541890:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_39151001_39176001_60C;SPAN=1155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:30:8.4:92.4,8.4,0:17:16:-92.42:92.42
10	39347363	542023:1	A	A[10:39347685[	85	PASS	EVDNC=ASSMB;HOMSEQ=AAATATCCCTTTGCAGATTCTA;MAPQ=60;MATEID=542023:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_39322501_39347501_49C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:28:0:-85.82:85.82
10	39347685	542023:2	A	]10:39347363]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AAATATCCCTTTGCAGATTCTA;MAPQ=60;MATEID=542023:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_39322501_39347501_49C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:28:0:-85.82:85.82
10	39406263	542069:1	T	T[10:39413843[	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTGAATCTTTCTTTTGATT;MAPQ=60;MATEID=542069:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_10_39396001_39421001_58C;SPAN=7580;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:39:12.2:84.8,0,12.2:13:17:-87.73:87.73
10	39413843	542069:2	T	]10:39406263]T	84	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TGAGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTGAATCTTTCTTTTGATT;MAPQ=60;MATEID=542069:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_10_39396001_39421001_58C;SPAN=7580;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:39:12.2:84.8,0,12.2:13:17:-87.73:87.73
10	39454303	542169:1	C	C[10:39454773[	73	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TTCTGAGAATGCTTCTGTGTAGTTTTTATGTGAAGATATTTCCTTTTC;MAPQ=59;MATEID=542169:2;MATENM=8;NM=1;NUMPARTS=3;SCTG=c_10_39445001_39470001_61C;SPAN=470;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:33:7.4:73.4,0,7.4:19:6:-76.04:76.04
10	39454773	542169:2	T	]10:39454303]T	73	PASS	DISC_MAPQ=20;EVDNC=TSI_L;HOMSEQ=TTCTGAGAATGCTTCTGTGTAGTTTTTATGTGAAGATATTTCCTTTTC;MAPQ=21;MATEID=542169:1;MATENM=1;NM=8;NUMPARTS=3;SCTG=c_10_39445001_39470001_61C;SPAN=470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:33:7.4:73.4,0,7.4:19:6:-76.04:76.04
10	39496326	869771:1	C	]20:28835228]C	22	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=869771:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39496326(-)-20:28835228(+)__20_28812001_28837001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25
10	39517954	542365:1	G	G[10:39523152[	17	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=542365:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39517954(+)-10:39523152(-)__10_39518501_39543501D;SPAN=5198;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
10	39523152	542365:2	T	]10:39517954]T	17	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=542365:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39517954(+)-10:39523152(-)__10_39518501_39543501D;SPAN=5198;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
10	39561377	543316:1	T	]10:41708970]T	19	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=543316:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561377(-)-10:41708970(+)__10_41699001_41724001D;SPAN=2147593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
10	39561422	542533:1	C	]10:39900386]C	36	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=542533:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561422(-)-10:39900386(+)__10_39886001_39911001D;SPAN=338964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
10	39570652	543048:1	T	T[10:41469918[	46	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGAAT;MAPQ=53;MATEID=543048:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_41454001_41479001_291C;SPAN=1899266;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:10:9:-46.21:46.21
10	39575131	542465:1	C	C[10:39576801[	30	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=542465:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39575131(+)-10:39576801(-)__10_39567501_39592501D;SPAN=1670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:185:30.7:30.7,0,433.4:0:25:-30.52:51.53
10	39576801	542465:2	A	]10:39575131]A	30	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=542465:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39575131(+)-10:39576801(-)__10_39567501_39592501D;SPAN=1670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:185:30.7:30.7,0,433.4:0:25:-30.52:51.53
10	39580940	542869:1	T	T[10:41034331[	59	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=542869:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39580940(+)-10:41034331(-)__10_41013001_41038001D;SPAN=1453391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41
10	39758629	542522:1	G	G[10:39844905[	27	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=542522:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39758629(+)-10:39844905(-)__10_39837001_39862001D;SPAN=86276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:0:11:-27.32:27.77
10	39844905	542522:2	T	]10:39758629]T	27	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=542522:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39758629(+)-10:39844905(-)__10_39837001_39862001D;SPAN=86276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:0:11:-27.32:27.77
10	39900386	542533:2	A	A[10:39561422[	36	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=542533:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561422(-)-10:39900386(+)__10_39886001_39911001D;SPAN=338964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
10	39940223	542923:1	C	]10:41121404]C	26	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=542923:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39940223(-)-10:41121404(+)__10_41111001_41136001D;SPAN=1181181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7
10	39944712	542980:1	T	T[10:41274581[	99	PASS	DISC_MAPQ=41;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCTTTGTGTTGTGTGTATTCAACTCACAGATTTGAACCTT;MAPQ=60;MATEID=542980:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_41258001_41283001_111C;SPAN=1329869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:3:9.3:102.3,9.3,0:11:25:-102.3:102.3
10	39956209	542664:1	C	C[10:40398600[	24	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=542664:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39956209(+)-10:40398600(-)__10_40376001_40401001D;SPAN=442391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:54:24.5:24.5,0,110.3:0:12:-24.43:27.6
10	40398600	542664:2	T	]10:39956209]T	24	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=542664:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39956209(+)-10:40398600(-)__10_40376001_40401001D;SPAN=442391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:54:24.5:24.5,0,110.3:0:12:-24.43:27.6
10	40616286	542749:1	G	G[10:41514088[	36	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=542749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:40616286(+)-10:41514088(-)__10_40596501_40621501D;SPAN=897802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
10	41034331	542869:2	G	]10:39580940]G	59	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=542869:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39580940(+)-10:41034331(-)__10_41013001_41038001D;SPAN=1453391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41
10	41121404	542923:2	G	G[10:39940223[	26	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=542923:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39940223(-)-10:41121404(+)__10_41111001_41136001D;SPAN=1181181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7
10	41274581	542980:2	C	]10:39944712]C	99	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCTTTGTGTTGTGTGTATTCAACTCACAGATTTGAACCTT;MAPQ=60;MATEID=542980:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_41258001_41283001_111C;SPAN=1329869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:3:9.3:102.3,9.3,0:11:25:-102.3:102.3
10	41275126	543061:1	T	T[10:41461934[	39	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=543061:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41275126(+)-10:41461934(-)__10_41454001_41479001D;SPAN=186808;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41
10	41310093	543068:1	C	C[10:41481615[	46	PASS	DISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=ATGGAAATATCTTCGTGTAAAAACTACACAGAATCATTC;MAPQ=60;MATEID=543068:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_41478501_41503501_170C;SPAN=171522;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:5:13:-46.21:46.21
10	41461934	543061:2	G	]10:41275126]G	39	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=543061:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41275126(+)-10:41461934(-)__10_41454001_41479001D;SPAN=186808;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41
10	41469918	543048:2	T	]10:39570652]T	46	PASS	DISC_MAPQ=33;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGAAT;MAPQ=53;MATEID=543048:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_41454001_41479001_291C;SPAN=1899266;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:10:9:-46.21:46.21
10	41481615	543068:2	A	]10:41310093]A	46	PASS	DISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=ATGGAAATATCTTCGTGTAAAAACTACACAGAATCATTC;MAPQ=60;MATEID=543068:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_41478501_41503501_170C;SPAN=171522;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:5:13:-46.21:46.21
10	41498909	543111:1	T	T[10:41531348[	9	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=543111:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41498909(+)-10:41531348(-)__10_41527501_41552501D;SPAN=32439;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5
10	41514088	542749:2	G	]10:40616286]G	36	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=542749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:40616286(+)-10:41514088(-)__10_40596501_40621501D;SPAN=897802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
10	41531348	543111:2	A	]10:41498909]A	9	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=543111:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41498909(+)-10:41531348(-)__10_41527501_41552501D;SPAN=32439;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5
10	41550926	543141:1	C	C[10:41582440[	36	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=543141:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41550926(+)-10:41582440(-)__10_41527501_41552501D;SPAN=31514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
10	41578760	543295:1	T	]10:41580449]T	32	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=543295:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41578760(-)-10:41580449(+)__10_41576501_41601501D;SPAN=1689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:48:32.9:32.9,0,85.7:0:14:-32.72:34.13
10	41580449	543295:2	G	G[10:41578760[	32	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=543295:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41578760(-)-10:41580449(+)__10_41576501_41601501D;SPAN=1689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:48:32.9:32.9,0,85.7:0:14:-32.72:34.13
10	41582440	543141:2	G	]10:41550926]G	36	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=543141:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41550926(+)-10:41582440(-)__10_41527501_41552501D;SPAN=31514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
10	41708970	543316:2	A	A[10:39561377[	19	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=543316:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561377(-)-10:41708970(+)__10_41699001_41724001D;SPAN=2147593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
10	42100210	543677:1	A	A[10:42100795[	86	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=GAATGGACTCGAATGGA;MAPQ=60;MATEID=543677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_42091001_42116001_352C;SPAN=585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:45:26.9:86.3,0,26.9:26:5:-88.1:88.1
10	42100795	543677:2	G	]10:42100210]G	86	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=GAATGGACTCGAATGGA;MAPQ=60;MATEID=543677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_42091001_42116001_352C;SPAN=585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:45:26.9:86.3,0,26.9:26:5:-88.1:88.1
10	42102314	543686:1	G	]10:42103670]G	0	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=543686:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:42102314(-)-10:42103670(+)__10_42091001_42116001D;SPAN=1356;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:102:2.1:0,2.1,260.7:0:8:2.263:14.5
10	42103670	543686:2	A	A[10:42102314[	0	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=543686:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:42102314(-)-10:42103670(+)__10_42091001_42116001D;SPAN=1356;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:102:2.1:0,2.1,260.7:0:8:2.263:14.5
10	43261053	544893:1	C	]10:43394966]C	10	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CG;MAPQ=60;MATEID=544893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_43389501_43414501_79C;SPAN=133913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:21:10.7:10.7,0,40.4:2:5:-10.6:11.67
10	43394966	544893:2	G	G[10:43261053[	10	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CG;MAPQ=60;MATEID=544893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_43389501_43414501_79C;SPAN=133913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:21:10.7:10.7,0,40.4:2:5:-10.6:11.67
10	44405861	545285:1	G	G[10:44406159[	85	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CATGTATGTTT;MAPQ=60;MATEID=545285:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_44394001_44419001_86C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:19:10:-85.82:85.82
10	44406159	545285:2	A	]10:44405861]A	85	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CATGTATGTTT;MAPQ=60;MATEID=545285:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_44394001_44419001_86C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:19:10:-85.82:85.82
10	44927494	545384:1	C	]10:44928688]C	53	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=545384:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_69C;SPAN=1194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66
10	44927779	545385:1	T	T[10:44928703[	24	PASS	EVDNC=ASSMB;INSERTION=AGTCA;MAPQ=60;MATEID=545385:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_44908501_44933501_67C;SPAN=924;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:41:24.8:24.8,0,77.6:11:0:-24.79:26.34
10	44928688	545384:2	A	A[10:44927494[	53	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=545384:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_69C;SPAN=1194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66
10	44928703	545385:2	C	]10:44927779]C	24	PASS	EVDNC=ASSMB;INSERTION=AGTCA;MAPQ=60;MATEID=545385:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_67C;SPAN=924;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:41:24.8:24.8,0,77.6:11:0:-24.79:26.34
10	46106667	545817:1	A	]10:46283237]A	72	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=545817:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:46106667(-)-10:46283237(+)__10_46280501_46305501D;SPAN=176570;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62
10	46283237	545817:2	C	C[10:46106667[	72	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=545817:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:46106667(-)-10:46283237(+)__10_46280501_46305501D;SPAN=176570;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62
10	49470491	546800:1	T	]10:49497474]T	23	PASS	EVDNC=ASSMB;INSERTION=CACA;MAPQ=60;MATEID=546800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_49490001_49515001_5C;SPAN=26983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
10	49497474	546800:2	T	T[10:49470491[	23	PASS	EVDNC=ASSMB;INSERTION=CACA;MAPQ=60;MATEID=546800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_49490001_49515001_5C;SPAN=26983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
10	49795424	546900:1	T	T[10:49803011[	30	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=546900:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:49795424(+)-10:49803011(-)__10_49784001_49809001D;SPAN=7587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
10	49803011	546900:2	A	]10:49795424]A	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=546900:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:49795424(+)-10:49803011(-)__10_49784001_49809001D;SPAN=7587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
10	50043661	546988:1	G	[10:50135654[G	18	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=546988:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50043661(-)-10:50135654(-)__10_50029001_50054001D;SPAN=91993;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
10	50135654	546988:2	T	[10:50043661[T	18	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=546988:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50043661(-)-10:50135654(-)__10_50029001_50054001D;SPAN=91993;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
10	50149982	547039:1	G	G[10:50151355[	99	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=547039:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50149982(+)-10:50151355(-)__10_50151501_50176501D;SPAN=1373;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:0:9.3:102.3,9.3,0:0:34:-102.3:102.3
10	50151355	547039:2	C	]10:50149982]C	99	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=547039:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50149982(+)-10:50151355(-)__10_50151501_50176501D;SPAN=1373;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:0:9.3:102.3,9.3,0:0:34:-102.3:102.3
10	51132282	547341:1	C	]10:51156594]C	24	PASS	EVDNC=ASSMB;INSERTION=AATTTCT;MAPQ=60;MATEID=547341:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_51156001_51181001_2C;SPAN=24312;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74
10	51156594	547341:2	T	T[10:51132282[	24	PASS	EVDNC=ASSMB;INSERTION=AATTTCT;MAPQ=60;MATEID=547341:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_51156001_51181001_2C;SPAN=24312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74
10	51384972	547381:1	A	A[10:51385914[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GG;MAPQ=60;MATEID=547381:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_51376501_51401501_2C;SPAN=942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:36:36.2:36.2,0,52.7:11:6:-36.1:36.3
10	51385914	547381:2	T	]10:51384972]T	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GG;MAPQ=60;MATEID=547381:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_51376501_51401501_2C;SPAN=942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:36:36.2:36.2,0,52.7:11:6:-36.1:36.3
10	53023898	547993:1	C	C[10:53029069[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=547993:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53023898(+)-10:53029069(-)__10_53018001_53043001D;SPAN=5171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5
10	53029069	547993:2	C	]10:53023898]C	99	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=547993:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53023898(+)-10:53029069(-)__10_53018001_53043001D;SPAN=5171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5
10	53101060	548047:1	C	C[10:53101370[	43	PASS	EVDNC=ASSMB;HOMSEQ=CCCGATTTTC;MAPQ=60;MATEID=548047:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53091501_53116501_84C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
10	53101370	548047:2	C	]10:53101060]C	43	PASS	EVDNC=ASSMB;HOMSEQ=CCCGATTTTC;MAPQ=60;MATEID=548047:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53091501_53116501_84C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
10	53220202	548132:1	A	A]10:53221322]	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=548132:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53214001_53239001_57C;SPAN=1120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:44:20.6:20.6,0,89.9:5:6:-20.64:23.11
10	53221322	548132:2	T	T]10:53220202]	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=548132:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53214001_53239001_57C;SPAN=1120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:44:20.6:20.6,0,89.9:5:6:-20.64:23.11
10	53531687	575098:1	G	]11:8406229]G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=575098:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53531687(-)-11:8406229(+)__11_8403501_8428501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
10	54686224	548789:1	T	]10:54709840]T	36	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=548789:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54708501_54733501_50C;SPAN=23616;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31
10	54709840	548789:2	T	T[10:54686224[	36	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=548789:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54708501_54733501_50C;SPAN=23616;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31
10	54757278	548830:1	T	T[10:54757581[	23	PASS	EVDNC=ASSMB;HOMSEQ=AATTCTACCTT;MAPQ=60;MATEID=548830:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_54757501_54782501_28C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:8:0:-24.05:24.05
10	54757581	548830:2	A	]10:54757278]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AATTCTACCTT;MAPQ=60;MATEID=548830:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_54757501_54782501_28C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:8:0:-24.05:24.05
10	54923020	548895:1	C	C[10:54924599[	49	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=548895:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54904501_54929501_54C;SPAN=1579;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
10	54924599	548895:2	G	]10:54923020]G	49	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=548895:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54904501_54929501_54C;SPAN=1579;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
10	56786728	988246:1	T	[Un_KN707707v1_decoy:1[T	52	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988246:2;MATENM=0;NM=0;NUMPARTS=13;REPSEQ=AA;SCTG=c_558_1_4339_0C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81
10	57255466	549907:1	T	T[10:57255800[	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATCATTCTT;MAPQ=60;MATEID=549907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57232001_57257001_133C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:4:6:-13.2:17.36
10	57255800	549907:2	A	]10:57255466]A	13	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=ATCATTCTT;MAPQ=60;MATEID=549907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57232001_57257001_133C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:4:6:-13.2:17.36
10	57450027	549945:1	G	G[10:57452094[	47	PASS	EVDNC=ASSMB;INSERTION=GTTAAAGATCAATC;MAPQ=60;MATEID=549945:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57428001_57453001_8C;SPAN=2067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
10	57452094	549945:2	T	]10:57450027]T	47	PASS	EVDNC=ASSMB;INSERTION=GTTAAAGATCAATC;MAPQ=60;MATEID=549945:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57428001_57453001_8C;SPAN=2067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
10	57497185	549966:1	T	T[10:57498224[	92	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATT;INSERTION=CATTTCTTTTTTCTTATCATTTTTTTCTTTGTCAACTATTTGATGACATCTCCAAACATCACCTTTTATTCATGACAGGAGTAGGGTATCATAGTAAAGAACACTGTTAATATAATCCAGATCCTTCACCACCTTCTGAAATATAGAGGAGCTTTAAGACTATGTTTGTTTTTCCTTGTATTTGCAGAAATAGCATGAGCTTTGTTTAAAGTCAGGCATCTAAAACCTTGCCCTGTATGTATTGACAAACTACACAAAATTTGTGATCTAT;MAPQ=60;MATEID=549966:2;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_10_57477001_57502001_26C;SPAN=1039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:18:8.4:92.4,8.4,0:31:0:-92.42:92.42
10	57497238	549967:1	G	G]10:57498228]	49	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=549967:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:57497238(+)-10:57498228(+)__10_57477001_57502001D;SPAN=990;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:0:17:-49.51:49.51
10	57497899	549968:1	A	[10:57498224[A	49	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATT;MAPQ=60;MATEID=549968:2;MATENM=2;NM=3;NUMPARTS=3;REPSEQ=TT;SCTG=c_10_57477001_57502001_26C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74
10	57498224	549968:2	A	[10:57497899[A	49	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATT;MAPQ=60;MATEID=549968:1;MATENM=3;NM=2;NUMPARTS=3;REPSEQ=TT;SCTG=c_10_57477001_57502001_26C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74
10	57498224	549966:2	A	]10:57497185]A	92	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATT;INSERTION=CATTTCTTTTTTCTTATCATTTTTTTCTTTGTCAACTATTTGATGACATCTCCAAACATCACCTTTTATTCATGACAGGAGTAGGGTATCATAGTAAAGAACACTGTTAATATAATCCAGATCCTTCACCACCTTCTGAAATATAGAGGAGCTTTAAGACTATGTTTGTTTTTCCTTGTATTTGCAGAAATAGCATGAGCTTTGTTTAAAGTCAGGCATCTAAAACCTTGCCCTGTATGTATTGACAAACTACACAAAATTTGTGATCTAT;MAPQ=60;MATEID=549966:1;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_10_57477001_57502001_26C;SPAN=1039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:18:8.4:92.4,8.4,0:31:0:-92.42:92.42
10	57498228	549967:2	T	T]10:57497238]	49	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=549967:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:57497238(+)-10:57498228(+)__10_57477001_57502001D;SPAN=990;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:0:17:-49.51:49.51
10	61983869	551468:1	T	T[10:61984034[	28	PASS	EVDNC=ASSMB;HOMSEQ=CCCCTTTTGTTCTT;MAPQ=60;MATEID=551468:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_61960501_61985501_50C;SPAN=165;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58
10	61984034	551468:2	C	]10:61983869]C	28	PASS	EVDNC=ASSMB;HOMSEQ=CCCCTTTTGTTCTT;MAPQ=60;MATEID=551468:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_61960501_61985501_50C;SPAN=165;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58
10	62238624	551625:1	T	]10:62396244]T	33	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=551625:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_62377001_62402001_11C;SPAN=157620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
10	62396244	551625:2	G	G[10:62238624[	33	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=551625:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_62377001_62402001_11C;SPAN=157620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
10	64639017	552403:1	A	A[10:64640988[	32	PASS	EVDNC=ASSMB;HOMSEQ=GATA;MAPQ=60;MATEID=552403:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_64631001_64656001_38C;SPAN=1971;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
10	64640988	552403:2	G	]10:64639017]G	32	PASS	EVDNC=ASSMB;HOMSEQ=GATA;MAPQ=60;MATEID=552403:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_64631001_64656001_38C;SPAN=1971;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
10	68482435	554180:1	A	]10:69420212]A	21	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=554180:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_69408501_69433501_55C;SPAN=937777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
10	68512353	553754:1	A	A[10:68512662[	33	PASS	EVDNC=ASSMB;HOMSEQ=AAAGATAAATGATA;MAPQ=60;MATEID=553754:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_68502001_68527001_136C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92
10	68512662	553754:2	A	]10:68512353]A	33	PASS	EVDNC=ASSMB;HOMSEQ=AAAGATAAATGATA;MAPQ=60;MATEID=553754:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_68502001_68527001_136C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92
10	69026605	553996:1	C	C[10:69027557[	43	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=553996:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_69016501_69041501_87C;SPAN=952;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8
10	69027557	553996:2	C	]10:69026605]C	43	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=553996:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_69016501_69041501_87C;SPAN=952;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8
10	69238368	554126:1	C	C[10:69238679[	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCAGGTATTTTC;MAPQ=60;MATEID=554126:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_69237001_69262001_24C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:27:4.2:75.9,4.2,0:15:10:-77.11:77.11
10	69238679	554126:2	A	]10:69238368]A	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCAGGTATTTTC;MAPQ=60;MATEID=554126:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_69237001_69262001_24C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:27:4.2:75.9,4.2,0:15:10:-77.11:77.11
10	69420212	554180:2	T	T[10:68482435[	21	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=554180:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_69408501_69433501_55C;SPAN=937777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
10	72713928	555235:1	T	T[10:72716457[	29	PASS	EVDNC=ASSMB;INSERTION=CTTT;MAPQ=60;MATEID=555235:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_72716001_72741001_7C;SPAN=2529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08
10	72716457	555235:2	T	]10:72713928]T	29	PASS	EVDNC=ASSMB;INSERTION=CTTT;MAPQ=60;MATEID=555235:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_72716001_72741001_7C;SPAN=2529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08
10	73082850	555296:1	T	T[10:73083075[	23	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=555296:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_73059001_73084001_2C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
10	73083075	555296:2	T	]10:73082850]T	23	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=555296:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_73059001_73084001_2C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
10	76003922	556020:1	C	]10:76080167]C	27	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=556020:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_76072501_76097501_30C;SPAN=76245;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
10	76080167	556020:2	T	T[10:76003922[	27	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=556020:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_76072501_76097501_30C;SPAN=76245;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
10	76495938	556119:1	T	T[10:76501261[	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556119:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76495938(+)-10:76501261(-)__10_76489001_76514001D;SPAN=5323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92
10	76501261	556119:2	A	]10:76495938]A	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556119:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76495938(+)-10:76501261(-)__10_76489001_76514001D;SPAN=5323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92
10	76586965	556162:1	C	C[10:76591819[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=556162:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76586965(+)-10:76591819(-)__10_76587001_76612001D;SPAN=4854;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:14:12.3:135.3,12.3,0:0:44:-135.3:135.3
10	76591819	556162:2	A	]10:76586965]A	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556162:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76586965(+)-10:76591819(-)__10_76587001_76612001D;SPAN=4854;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:14:12.3:135.3,12.3,0:0:44:-135.3:135.3
10	77573728	556451:2	G	G]2:70434172]	10	PASS	DISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=ATAGAATAGAATAGAATAG;INSERTION=C;MAPQ=11;MATEID=556451:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATA;SCTG=c_10_77567001_77592001_32C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:3.4:10.3,0,3.4:2:9:-10.19:10.19
10	79332425	556796:1	T	T[10:79333024[	85	PASS	EVDNC=ASSMB;INSERTION=TTCTTCTCAATATAATGTCT;MAPQ=60;MATEID=556796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_79331001_79356001_10C;SPAN=599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:28:0:-85.82:85.82
10	79333024	556796:2	G	]10:79332425]G	85	PASS	EVDNC=ASSMB;INSERTION=TTCTTCTCAATATAATGTCT;MAPQ=60;MATEID=556796:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_79331001_79356001_10C;SPAN=599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:28:0:-85.82:85.82
10	80977995	557187:1	T	T[10:80978301[	38	PASS	EVDNC=ASSMB;HOMSEQ=GGTGCTTTCTCTTT;MAPQ=60;MATEID=557187:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_67C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03
10	80978301	557187:2	G	]10:80977995]G	38	PASS	EVDNC=ASSMB;HOMSEQ=GGTGCTTTCTCTTT;MAPQ=60;MATEID=557187:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_80972501_80997501_67C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03
10	80990542	557201:1	G	G[10:80992894[	92	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=557201:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_16C;SPAN=2352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:29:8.4:92.4,8.4,0:30:0:-92.42:92.42
10	80992894	557201:2	T	]10:80990542]T	92	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=557201:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_16C;SPAN=2352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:29:8.4:92.4,8.4,0:30:0:-92.42:92.42
10	81144901	557229:1	G	G[10:81145155[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=557229:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_81144001_81169001_16C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
10	81145155	557229:2	T	]10:81144901]T	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=557229:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_81144001_81169001_16C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
10	81212443	988144:1	A	[Un_KN707693v1_decoy:1[A	66	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCAATTAAACCTCTTTCCTTTATAAATTA;INSERTION=CTACCGCCATGTAAAGAAGGACGTGTTTGCTTCCCTTTCCAA;MAPQ=60;MATEID=988144:2;MATENM=2;NM=0;NUMPARTS=6;SCTG=c_544_1_2899_9C;SPAN=-1;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:7:6:66,6,0:22:0:-66.02:66.02
10	81212445	988145:1	A	A]Un_KN707693v1_decoy:2899]	49	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988145:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_544_1_2899_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51
10	81753084	557475:1	A	]10:83297494]A	12	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=557475:2;MATENM=0;NM=1;NUMPARTS=2;REPSEQ=AA;SCTG=c_10_81732001_81757001_7C;SECONDARY;SPAN=1544410;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:15:12.2:12.2,0,25.4:3:3:-12.29:12.54
10	82229402	557634:1	A	A[10:82238231[	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAA;MAPQ=60;MATEID=557634:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_82222001_82247001_45C;SPAN=8829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:5:6:-18.26:19.27
10	82238231	557634:2	A	]10:82229402]A	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAA;MAPQ=60;MATEID=557634:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_82222001_82247001_45C;SPAN=8829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:5:6:-18.26:19.27
10	82529077	557702:1	T	T[10:82658176[	42	PASS	EVDNC=ASSMB;INSERTION=ATATAT;MAPQ=60;MATEID=557702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_82638501_82663501_36C;SPAN=129099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
10	82658176	557702:2	A	]10:82529077]A	42	PASS	EVDNC=ASSMB;INSERTION=ATATAT;MAPQ=60;MATEID=557702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_82638501_82663501_36C;SPAN=129099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
10	83297494	557475:2	G	G[10:81753084[	12	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=0;MATEID=557475:1;MATENM=1;NM=0;NUMPARTS=2;REPSEQ=AA;SCTG=c_10_81732001_81757001_7C;SECONDARY;SPAN=1544410;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:15:12.2:12.2,0,25.4:3:3:-12.29:12.54
10	83907452	558069:1	A	]10:83907659]A	34	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=558069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_83888001_83913001_24C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12
10	83907659	558069:2	A	A[10:83907452[	34	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=558069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_83888001_83913001_24C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12
10	85042018	558387:1	T	T[10:85042685[	59	PASS	EVDNC=ASSMB;INSERTION=CATTCTGATTAATCCTTCTTG;MAPQ=60;MATEID=558387:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_85039501_85064501_14C;SPAN=667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66
10	85042021	558389:1	C	]10:85042847]C	68	PASS	EVDNC=ASSMB;INSERTION=AAATT;MAPQ=60;MATEID=558389:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_85039501_85064501_70C;SPAN=826;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:38:25.7:68.6,0,25.7:24:0:-69.52:69.52
10	85042685	558387:2	T	]10:85042018]T	59	PASS	EVDNC=ASSMB;INSERTION=CATTCTGATTAATCCTTCTTG;MAPQ=60;MATEID=558387:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_85039501_85064501_14C;SPAN=667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66
10	85042847	558389:2	T	T[10:85042021[	68	PASS	EVDNC=ASSMB;INSERTION=AAATT;MAPQ=60;MATEID=558389:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_85039501_85064501_70C;SPAN=826;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:38:25.7:68.6,0,25.7:24:0:-69.52:69.52
10	86524714	558731:1	C	]10:86524809]C	65	PASS	EVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=558731:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_86509501_86534501_39C;SPAN=95;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18
10	86524809	558731:2	G	G[10:86524714[	65	PASS	EVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=558731:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_86509501_86534501_39C;SPAN=95;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18
10	87516040	559033:1	G	G[10:87516812[	49	PASS	DISC_MAPQ=51;EVDNC=ASDIS;INSERTION=TGAAAATACATGT;MAPQ=60;MATEID=559033:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_87514001_87539001_34C;SPAN=772;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:14:8:-49.51:49.51
10	87516812	559033:2	A	]10:87516040]A	49	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TGAAAATACATGT;MAPQ=60;MATEID=559033:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_87514001_87539001_34C;SPAN=772;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:14:8:-49.51:49.51
10	88134552	559231:1	T	]10:88134621]T	41	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACCATCATTATAACCACCACTAC;INSERTION=CCATCACCATCATCATTATGACCACCTCACCACCACCACCACAAAGGCCATCATTATAACCACCGCTAACACTACTATCACCATCACCATCATCAT;MAPQ=60;MATEID=559231:2;MATENM=6;NM=1;NUMPARTS=3;REPSEQ=TACTACTAC;SCTG=c_10_88126501_88151501_3C;SPAN=69;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:80:41.8:41.8,0,49:35:0:-41.35:41.44
10	88134621	559231:2	A	A[10:88134552[	41	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACCATCATTATAACCACCACTAC;INSERTION=CCATCACCATCATCATTATGACCACCTCACCACCACCACCACAAAGGCCATCATTATAACCACCGCTAACACTACTATCACCATCACCATCATCAT;MAPQ=60;MATEID=559231:1;MATENM=1;NM=6;NUMPARTS=3;REPSEQ=TACTACTAC;SCTG=c_10_88126501_88151501_3C;SPAN=69;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:80:41.8:41.8,0,49:35:0:-41.35:41.44
10	92326236	560176:1	T	]10:92336729]T	17	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=560176:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92316001_92341001_16C;SPAN=10493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:42:17.9:17.9,0,87.2:9:0:-17.9:20.54
10	92336729	560176:2	A	A[10:92326236[	17	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=560176:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92316001_92341001_16C;SPAN=10493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:42:17.9:17.9,0,87.2:9:0:-17.9:20.54
10	92374842	560194:1	A	A[10:92377897[	59	PASS	EVDNC=ASSMB;INSERTION=GTTGACTTATCTTTT;MAPQ=60;MATEID=560194:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92365001_92390001_30C;SPAN=3055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
10	92377897	560194:2	A	]10:92374842]A	59	PASS	EVDNC=ASSMB;INSERTION=GTTGACTTATCTTTT;MAPQ=60;MATEID=560194:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92365001_92390001_30C;SPAN=3055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
10	93785720	560655:1	A	A[10:93786739[	99	PASS	EVDNC=ASSMB;INSERTION=CCACCACATGGCACACAAAAGGGTG;MAPQ=60;MATEID=560655:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_10_93786001_93811001_55C;SPAN=1019;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:6:9.6:105.6,9.6,0:35:0:-105.6:105.6
10	93786739	560655:2	G	]10:93785720]G	99	PASS	EVDNC=ASSMB;INSERTION=CCACCACATGGCACACAAAAGGGTG;MAPQ=60;MATEID=560655:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_10_93786001_93811001_55C;SPAN=1019;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:6:9.6:105.6,9.6,0:35:0:-105.6:105.6
10	94531640	560853:2	T	]3:183712226]T	23	PASS	EVDNC=ASSMB;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTT;MAPQ=60;MATEID=560853:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_10_94521001_94546001_53C;SECONDARY;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
10	97275116	561674:1	G	G[10:97277641[	89	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGCACTG;MAPQ=60;MATEID=561674:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_97265001_97290001_7C;SPAN=2525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:16:8.1:89.1,8.1,0:29:0:-89.12:89.12
10	97277641	561674:2	T	]10:97275116]T	89	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGCACTG;MAPQ=60;MATEID=561674:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_97265001_97290001_7C;SPAN=2525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:16:8.1:89.1,8.1,0:29:0:-89.12:89.12
10	97348534	561719:1	T	T[10:97348852[	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACTATCCT;MAPQ=60;MATEID=561719:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_97338501_97363501_125C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:18:7.8:85.8,7.8,0:23:6:-85.82:85.82
10	97348852	561719:2	C	]10:97348534]C	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACTATCCT;MAPQ=60;MATEID=561719:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_97338501_97363501_125C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:18:7.8:85.8,7.8,0:23:6:-85.82:85.82
10	100092116	562623:2	C	[4:152957[C	36	PASS	DISC_MAPQ=9;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=562623:1;MATENM=0;NM=24;NUMPARTS=2;SCTG=c_10_100082501_100107501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:5:8:-36.31:36.31
10	100398553	562722:1	T	T[10:100399781[	59	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=562722:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_10_100376501_100401501_6C;SPAN=1228;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41
10	100399781	562722:2	C	]10:100398553]C	59	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=562722:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_10_100376501_100401501_6C;SPAN=1228;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41
10	101685980	563070:1	C	C[10:101686579[	38	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=563070:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_101675001_101700001_27C;SPAN=599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37
10	101686579	563070:2	T	]10:101685980]T	38	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=563070:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_101675001_101700001_27C;SPAN=599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37
10	103293432	563413:1	G	G[10:103294423[	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGG;MAPQ=60;MATEID=563413:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_103292001_103317001_15C;SPAN=991;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:8:7.2:79.2,7.2,0:17:10:-79.22:79.22
10	103294423	563413:2	G	]10:103293432]G	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGG;MAPQ=60;MATEID=563413:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_103292001_103317001_15C;SPAN=991;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:8:7.2:79.2,7.2,0:17:10:-79.22:79.22
10	103337782	563426:1	C	C[10:103338080[	39	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATACAAAATTAGC;MAPQ=60;MATEID=563426:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_103316501_103341501_31C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61
10	103338080	563426:2	A	]10:103337782]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATACAAAATTAGC;MAPQ=60;MATEID=563426:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_103316501_103341501_31C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61
10	105493244	563943:1	G	G[10:105493594[	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGG;MAPQ=60;MATEID=563943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_105472501_105497501_69C;SPAN=350;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:13:12:-66.02:66.02
10	105493594	563943:2	A	]10:105493244]A	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGG;MAPQ=60;MATEID=563943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_105472501_105497501_69C;SPAN=350;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:13:12:-66.02:66.02
10	106270563	564296:1	C	C[10:106272784[	38	PASS	EVDNC=ASSMB;HOMSEQ=CTCC;MAPQ=60;MATEID=564296:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_106256501_106281501_80C;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
10	106272784	564296:2	C	]10:106270563]C	38	PASS	EVDNC=ASSMB;HOMSEQ=CTCC;MAPQ=60;MATEID=564296:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_106256501_106281501_80C;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
10	108459565	564965:1	T	]10:108459702]T	23	PASS	EVDNC=ASSMB;HOMSEQ=TAAA;MAPQ=60;MATEID=564965:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_108437001_108462001_27C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:35:23.3:23.3,0,62.9:10:0:-23.17:24.27
10	108459702	564965:2	A	A[10:108459565[	23	PASS	EVDNC=ASSMB;HOMSEQ=TAAA;MAPQ=60;MATEID=564965:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_108437001_108462001_27C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:35:23.3:23.3,0,62.9:10:0:-23.17:24.27
10	108936075	565091:1	T	T[10:108936418[	32	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATATATATAT;INSERTION=GTATGAATATATATGTATGAATATATGAAAAA;MAPQ=60;MATEID=565091:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_10_108927001_108952001_35C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:24:26.3:32.9,0,26.3:12:0:-32.89:32.89
10	108936418	565091:2	T	]10:108936075]T	32	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATATATATAT;INSERTION=GTATGAATATATATGTATGAATATATGAAAAA;MAPQ=60;MATEID=565091:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_10_108927001_108952001_35C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:24:26.3:32.9,0,26.3:12:0:-32.89:32.89
10	109812476	565264:1	C	C[10:109818458[	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=565264:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:109812476(+)-10:109818458(-)__10_109809001_109834001D;SPAN=5982;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92
10	109818458	565264:2	T	]10:109812476]T	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=565264:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:109812476(+)-10:109818458(-)__10_109809001_109834001D;SPAN=5982;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92
10	110418405	565388:2	A	A[7:93347523[	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=565388:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_110397001_110422001_54C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:12:6.6:72.6,6.6,0:14:15:-72.62:72.62
10	112352425	565981:1	G	G[10:112356901[	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=565981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_112357001_112382001_92C;SPAN=4476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:5:3:1.2:13.2,1.2,0:4:3:-13.2:13.2
10	112356901	565981:2	G	]10:112352425]G	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=565981:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_112357001_112382001_92C;SPAN=4476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:5:3:1.2:13.2,1.2,0:4:3:-13.2:13.2
10	112916251	566258:1	T	T[10:113538596[	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=566258:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113533001_113558001_15C;SPAN=622345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
10	113538596	566258:2	T	]10:112916251]T	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=566258:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113533001_113558001_15C;SPAN=622345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
10	113789804	566308:1	C	C[10:113790335[	19	PASS	EVDNC=ASSMB;HOMSEQ=GGTGGCTCATGC;MAPQ=60;MATEID=566308:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113778001_113803001_1C;SPAN=531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
10	113790335	566308:2	G	]10:113789804]G	19	PASS	EVDNC=ASSMB;HOMSEQ=GGTGGCTCATGC;MAPQ=60;MATEID=566308:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113778001_113803001_1C;SPAN=531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
10	115697337	566990:1	A	]10:115917901]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=566990:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_115909501_115934501_2C;SPAN=220564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18
10	115917901	566990:2	T	T[10:115697337[	39	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=566990:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_115909501_115934501_2C;SPAN=220564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18
10	116079800	567050:1	A	A[10:116121012[	23	PASS	EVDNC=ASSMB;HOMSEQ=TCGA;MAPQ=60;MATEID=567050:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116105501_116130501_72C;SPAN=41212;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
10	116121012	567050:2	T	]10:116079800]T	23	PASS	EVDNC=ASSMB;HOMSEQ=TCGA;MAPQ=60;MATEID=567050:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116105501_116130501_72C;SPAN=41212;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
10	116902437	567330:1	T	]10:116990707]T	29	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TTTTCA;MAPQ=60;MATEID=567330:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116987501_117012501_21C;SPAN=88270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:6:6:-31.35:31.35
10	116990707	567330:2	A	A[10:116902437[	29	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTTTCA;MAPQ=60;MATEID=567330:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116987501_117012501_21C;SPAN=88270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:6:6:-31.35:31.35
10	119426866	568110:1	T	]10:119427330]T	21	PASS	DISC_MAPQ=35;EVDNC=ASDIS;HOMSEQ=TGCCATCAACAGCATCACTGCC;MAPQ=35;MATEID=568110:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_119413001_119438001_56C;SPAN=464;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:53:21.5:21.5,0,110.6:4:7:-21.41:24.93
10	119427330	568110:2	C	C[10:119426866[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCCATCAACAGCATCACTGCC;MAPQ=60;MATEID=568110:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_119413001_119438001_56C;SPAN=464;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:53:21.5:21.5,0,110.6:4:7:-21.41:24.93
10	120467203	568417:1	C	C[10:120469236[	59	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGACTGCAGTGGCACAATCTCAGCTCACTGCAAGCTCCACCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=568417:2;MATENM=5;NM=5;NUMPARTS=2;SCTG=c_10_120466501_120491501_15C;SPAN=2033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:3:5.4:59.4,5.4,0:4:16:-59.41:59.41
10	120469236	568417:2	T	]10:120467203]T	59	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGACTGCAGTGGCACAATCTCAGCTCACTGCAAGCTCCACCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=568417:1;MATENM=5;NM=5;NUMPARTS=2;SCTG=c_10_120466501_120491501_15C;SPAN=2033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:3:5.4:59.4,5.4,0:4:16:-59.41:59.41
10	122457304	569156:1	G	G[10:122457748[	72	PASS	EVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
10	122457748	569156:2	A	]10:122457304]A	72	PASS	EVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
10	121496612	569156:2	A	]10:122457304]C	72	PASS	EVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
10	123254349	569333:1	T	]10:123254874]T	43	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=569333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254349(-)-10:123254874(+)__10_123235001_123260001D;SPAN=525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:33:37.1:43.7,0,37.1:0:16:-43.55:43.55
10	123254874	569333:2	A	A[10:123254349[	43	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=569333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254349(-)-10:123254874(+)__10_123235001_123260001D;SPAN=525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:33:37.1:43.7,0,37.1:0:16:-43.55:43.55
10	123254953	569351:1	C	]10:123255771]C	61	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=569351:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254953(-)-10:123255771(+)__10_123235001_123260001D;SPAN=818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:0:22:-62:62
10	123255771	569351:2	A	A[10:123254953[	61	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=569351:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254953(-)-10:123255771(+)__10_123235001_123260001D;SPAN=818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:0:22:-62:62
10	125501848	570076:1	T	[10:125502195[T	47	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=570076:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125501848(-)-10:125502195(-)__10_125489001_125514001D;SPAN=347;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:0:17:-46.91:46.91
10	125502112	570079:1	C	C]10:125508653]	99	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=570079:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_4C;SPAN=6541;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:30:9:99,9,0:33:0:-99.02:99.02
10	125502195	570076:2	C	[10:125501848[C	47	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=570076:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125501848(-)-10:125502195(-)__10_125489001_125514001D;SPAN=347;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:0:17:-46.91:46.91
10	125502228	570080:1	C	]10:125512653]C	42	PASS	EVDNC=ASSMB;HOMSEQ=CCACCAT;MAPQ=60;MATEID=570080:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_23C;SPAN=10425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:37:42.5:42.5,0,49.1:16:0:-42.42:42.46
10	125503088	570084:1	C	C[10:125508666[	57	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=570084:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_8C;SPAN=5578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:29:14.9:57.8,0,14.9:20:0:-59.26:59.26
10	125508653	570079:2	A	A]10:125502112]	99	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=570079:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_125489001_125514001_4C;SPAN=6541;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:30:9:99,9,0:33:0:-99.02:99.02
10	125508666	570084:2	G	]10:125503088]G	57	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=570084:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_10_125489001_125514001_8C;SPAN=5578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:29:14.9:57.8,0,14.9:20:0:-59.26:59.26
10	125512653	570080:2	T	T[10:125502228[	42	PASS	EVDNC=ASSMB;HOMSEQ=CCACCAT;MAPQ=60;MATEID=570080:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_23C;SPAN=10425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:37:42.5:42.5,0,49.1:16:0:-42.42:42.46
10	125894203	907396:1	A	A[22:10739861[	44	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=907396:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125894203(+)-22:10739861(-)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:75:44.9:44.9,0,143.9:0:20:-44.94:47.83
10	125895950	907397:1	C	]22:10741540]C	25	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=907397:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125895950(-)-22:10741540(+)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35
10	126251496	570306:1	C	]10:126252270]C	35	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=570306:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:126251496(-)-10:126252270(+)__10_126248501_126273501D;SPAN=774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:37:35.9:35.9,0,55.7:0:14:-35.81:36.09
10	126252270	570306:2	G	G[10:126251496[	35	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=570306:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:126251496(-)-10:126252270(+)__10_126248501_126273501D;SPAN=774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:37:35.9:35.9,0,55.7:0:14:-35.81:36.09
10	126892082	570478:2	A	]7:26639999]A	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=570478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26639999(+)-10:126892082(-)__10_126885501_126910501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
10	127169427	570581:1	T	T[10:127169686[	9	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=570581:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_127155001_127180001_14C;SPAN=259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:25:9.5:9.5,0,52.4:5:0:-9.478:11.24
10	127169686	570581:2	T	]10:127169427]T	9	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=570581:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_127155001_127180001_14C;SPAN=259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:25:9.5:9.5,0,52.4:5:0:-9.478:11.24
10	127767049	570874:1	T	T[10:127767345[	62	PASS	EVDNC=ASSMB;HOMSEQ=TAGTTTTTTTT;MAPQ=60;MATEID=570874:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_127743001_127768001_17C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:14:5.7:62.7,5.7,0:21:0:-62.72:62.72
10	127767345	570874:2	T	]10:127767049]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TAGTTTTTTTT;MAPQ=60;MATEID=570874:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_127743001_127768001_17C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:14:5.7:62.7,5.7,0:21:0:-62.72:62.72
10	129038607	571258:1	T	T[10:129039011[	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=571258:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_129017001_129042001_63C;SPAN=404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:7:4:-24.3:24.91
10	129039011	571258:2	T	]10:129038607]T	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=571258:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_129017001_129042001_63C;SPAN=404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:7:4:-24.3:24.91
10	129796916	571494:1	A	A[10:129797210[	20	PASS	EVDNC=ASSMB;HOMSEQ=GCA;MAPQ=60;MATEID=571494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_129776501_129801501_112C;SPAN=294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45
10	129797210	571494:2	G	]10:129796916]G	20	PASS	EVDNC=ASSMB;HOMSEQ=GCA;MAPQ=60;MATEID=571494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_129776501_129801501_112C;SPAN=294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45
10	130496358	571701:1	C	]10:130496511]C	96	PASS	EVDNC=ASSMB;INSERTION=GCATGATGACTTCG;MAPQ=60;MATEID=571701:2;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_10_130487001_130512001_9C;SPAN=153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:79:96.8:96.8,0,100.1:36:0:-96.63:96.64
10	130496418	571702:1	G	]10:130496534]G	85	PASS	EVDNC=ASSMB;INSERTION=GGGATGGAAGTAACCTTCTGCATGATGACTTCGCTAGTACATGGGAGGGAA;MAPQ=60;MATEID=571702:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_10_130487001_130512001_1C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:96:85.4:85.4,0,154.7:34:0:-85.25:86.4
10	130496511	571701:2	T	T[10:130496358[	96	PASS	EVDNC=ASSMB;INSERTION=GCATGATGACTTCG;MAPQ=60;MATEID=571701:1;MATENM=4;NM=6;NUMPARTS=2;SCTG=c_10_130487001_130512001_9C;SPAN=153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:79:96.8:96.8,0,100.1:36:0:-96.63:96.64
10	130496534	571702:2	C	C[10:130496418[	85	PASS	EVDNC=ASSMB;INSERTION=GGGATGGAAGTAACCTTCTGCATGATGACTTCGCTAGTACATGGGAGGGAA;MAPQ=60;MATEID=571702:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_10_130487001_130512001_1C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:96:85.4:85.4,0,154.7:34:0:-85.25:86.4
10	130790016	571781:1	T	]10:130790900]T	60	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=571781:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:130790016(-)-10:130790900(+)__10_130781001_130806001D;SPAN=884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:31:14.6:60.8,0,14.6:0:21:-61.93:61.93
10	130790062	571782:1	C	]10:130790698]C	38	PASS	EVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=571782:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_130781001_130806001_6C;SPAN=636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:53:38:38,0,94.1:16:0:-37.92:39.29
10	130790698	571782:2	A	A[10:130790062[	38	PASS	EVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=571782:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_130781001_130806001_6C;SPAN=636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:53:38:38,0,94.1:16:0:-37.92:39.29
10	130790900	571781:2	A	A[10:130790016[	60	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=571781:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:130790016(-)-10:130790900(+)__10_130781001_130806001D;SPAN=884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:31:14.6:60.8,0,14.6:0:21:-61.93:61.93
10	131176381	571919:1	A	]10:131177187]A	61	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=571919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:131176381(-)-10:131177187(+)__10_131173001_131198001D;SPAN=806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:40:38.3:61.4,0,38.3:0:22:-61.64:61.64
10	131177187	571919:2	C	C[10:131176381[	61	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=571919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:131176381(-)-10:131177187(+)__10_131173001_131198001D;SPAN=806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:40:38.3:61.4,0,38.3:0:22:-61.64:61.64
10	132056598	785033:1	A	A[17:19919536[	22	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=785033:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:132056598(+)-17:19919536(-)__17_19918501_19943501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
10	133291375	572642:1	G	G[10:133292453[	39	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=572642:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:133291375(+)-10:133292453(-)__10_133280001_133305001D;SPAN=1078;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:9:3.6:39.6,3.6,0:0:13:-39.61:39.61
10	133292453	572642:2	C	]10:133291375]C	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=572642:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:133291375(+)-10:133292453(-)__10_133280001_133305001D;SPAN=1078;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:9:3.6:39.6,3.6,0:0:13:-39.61:39.61
11	737067	574073:1	C	]11:3896184]C	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAAGTGCTGGGATTACAGGCG;MAPQ=60;MATEID=574073:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_3895501_3920501_27C;SPAN=3159117;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:21:5:-69.32:69.32
11	1078576	573385:1	C	C[11:1081475[	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=573385:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1078576(+)-11:1081475(-)__11_1053501_1078501D;SPAN=2899;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
11	1081475	573385:2	C	]11:1078576]C	36	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=573385:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1078576(+)-11:1081475(-)__11_1053501_1078501D;SPAN=2899;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
11	1094541	573395:1	C	]11:1095052]C	15	PASS	DISC_MAPQ=7;EVDNC=TSI_L;INSERTION=TCTCCAATAACCACCACTCCCAGCCCTCCAACAACCACCATGACCACCCCTT;MAPQ=25;MATEID=573395:2;MATENM=3;NM=1;NUMPARTS=3;REPSEQ=ACCAACCA;SCTG=c_11_1078001_1103001_13C;SPAN=511;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:33:15:15,0,27:10:3:-14.72:15.08
11	1095052	573395:2	C	C[11:1094541[	15	PASS	DISC_MAPQ=28;EVDNC=TSI_L;INSERTION=TCTCCAATAACCACCACTCCCAGCCCTCCAACAACCACCATGACCACCCCTT;MAPQ=21;MATEID=573395:1;MATENM=1;NM=3;NUMPARTS=3;REPSEQ=ACCAACCA;SCTG=c_11_1078001_1103001_13C;SPAN=511;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:33:15:15,0,27:10:3:-14.72:15.08
11	1155037	573441:1	T	]11:1155851]T	79	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=573441:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1155037(-)-11:1155851(+)__11_1151501_1176501D;SPAN=814;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:22:7.2:79.2,7.2,0:0:26:-79.22:79.22
11	1155851	573441:2	T	T[11:1155037[	79	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=573441:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1155037(-)-11:1155851(+)__11_1151501_1176501D;SPAN=814;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:22:7.2:79.2,7.2,0:0:26:-79.22:79.22
11	1894138	573614:1	G	G[11:1915725[	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=573614:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1894138(+)-11:1915725(-)__11_1911001_1936001D;SPAN=21587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	1915725	573614:2	T	]11:1894138]T	23	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=573614:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1894138(+)-11:1915725(-)__11_1911001_1936001D;SPAN=21587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	3896184	574073:2	G	G[11:737067[	69	PASS	DISC_MAPQ=24;EVDNC=ASDIS;HOMSEQ=CCAAAGTGCTGGGATTACAGGCG;MAPQ=60;MATEID=574073:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_3895501_3920501_27C;SPAN=3159117;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:21:5:-69.32:69.32
11	5738972	574496:1	T	T[11:5741140[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=574496:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:5738972(+)-11:5741140(-)__11_5733001_5758001D;SPAN=2168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:4:4.2:46.2,4.2,0:0:15:-46.21:46.21
11	5741140	574496:2	A	]11:5738972]A	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=574496:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:5738972(+)-11:5741140(-)__11_5733001_5758001D;SPAN=2168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:4:4.2:46.2,4.2,0:0:15:-46.21:46.21
11	7768817	574901:1	C	C[11:7770406[	29	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=574901:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:7768817(+)-11:7770406(-)__11_7766501_7791501D;SPAN=1589;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
11	7770406	574901:2	T	]11:7768817]T	29	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=574901:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:7768817(+)-11:7770406(-)__11_7766501_7791501D;SPAN=1589;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
11	8406229	575098:2	A	A[10:53531687[	26	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=575098:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53531687(-)-11:8406229(+)__11_8403501_8428501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	9302135	575297:1	T	T[11:9303055[	39	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=575297:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:9302135(+)-11:9303055(-)__11_9285501_9310501D;SPAN=920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:2:3.6:39.6,3.6,0:0:13:-39.61:39.61
11	9303055	575297:2	T	]11:9302135]T	39	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=575297:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:9302135(+)-11:9303055(-)__11_9285501_9310501D;SPAN=920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:2:3.6:39.6,3.6,0:0:13:-39.61:39.61
11	10271301	575583:1	T	T[11:10272287[	56	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=575583:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:10271301(+)-11:10272287(-)__11_10265501_10290501D;SPAN=986;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
11	10272287	575583:2	G	]11:10271301]G	56	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=575583:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:10271301(+)-11:10272287(-)__11_10265501_10290501D;SPAN=986;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
11	15686349	587688:1	G	G]11:47893214]	92	PASS	DISC_MAPQ=6;EVDNC=ASDIS;HOMSEQ=CCTCTGCCC;MAPQ=53;MATEID=587688:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_11_47873001_47898001_103C;SPAN=32206865;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:26:5:-92.42:92.42
11	16576031	577036:1	C	C[11:16576340[	89	PASS	EVDNC=ASSMB;HOMSEQ=GAAAACCACAACTAC;MAPQ=60;MATEID=577036:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_16562001_16587001_22C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12
11	16576340	577036:2	G	]11:16576031]G	89	PASS	EVDNC=ASSMB;HOMSEQ=GAAAACCACAACTAC;MAPQ=60;MATEID=577036:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_16562001_16587001_22C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12
11	17174305	577223:1	C	C[11:17174606[	16	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAACAGC;MAPQ=60;MATEID=577223:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_17174501_17199501_24C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:6:6:1.5:16.5,1.5,0:6:0:-16.5:16.5
11	17174606	577223:2	A	]11:17174305]A	16	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAACAGC;MAPQ=60;MATEID=577223:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_17174501_17199501_24C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:6:6:1.5:16.5,1.5,0:6:0:-16.5:16.5
11	18373486	577582:1	G	G[11:18374069[	24	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=577582:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_18350501_18375501_25C;SPAN=583;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
11	18374069	577582:2	G	]11:18373486]G	24	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=577582:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_18350501_18375501_25C;SPAN=583;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
11	18465185	577693:1	T	]11:18561273]T	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCTA;MAPQ=60;MATEID=577693:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_18546501_18571501_89C;SPAN=96088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:18:14.9:14.9,0,28.1:5:4:-14.75:15.05
11	18561273	577693:2	G	G[11:18465185[	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCTA;MAPQ=60;MATEID=577693:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_18546501_18571501_89C;SPAN=96088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:18:14.9:14.9,0,28.1:5:4:-14.75:15.05
11	20762949	578367:2	T	[1:53954306[T	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=578367:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_20751501_20776501_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:9:3.6:39.6,3.6,0:11:3:-39.61:39.61
11	23346027	579444:1	A	]11:23363347]A	22	PASS	EVDNC=ASSMB;INSERTION=ACTGCAC;MAPQ=60;MATEID=579444:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_23348501_23373501_147C;SPAN=17320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
11	23363347	579444:2	G	G[11:23346027[	22	PASS	EVDNC=ASSMB;INSERTION=ACTGCAC;MAPQ=60;MATEID=579444:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_23348501_23373501_147C;SPAN=17320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
11	24263186	579826:1	T	T]11:24266369]	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=579826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_12C;SPAN=3183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:36:6.5:82.4,0,6.5:27:3:-85.84:85.84
11	24263419	579827:1	C	C[11:24266243[	67	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAC;MAPQ=60;MATEID=579827:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_51C;SPAN=2824;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:29:5:67.7,0,5:22:7:-70.94:70.94
11	24263577	579828:1	T	[11:24266034[T	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=579828:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_26C;SPAN=2457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:8:3:-32.57:32.57
11	24263704	579829:1	A	A[11:24266691[	41	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=579829:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_57C;SPAN=2987;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24
11	24266034	579828:2	T	[11:24263577[T	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=579828:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_26C;SPAN=2457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:8:3:-32.57:32.57
11	24266243	579827:2	A	]11:24263419]A	67	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAC;MAPQ=60;MATEID=579827:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_51C;SPAN=2824;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:29:5:67.7,0,5:22:7:-70.94:70.94
11	24266369	579826:2	G	G]11:24263186]	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=579826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_12C;SPAN=3183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:36:6.5:82.4,0,6.5:27:3:-85.84:85.84
11	24266691	579829:2	C	]11:24263704]C	41	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=579829:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_57C;SPAN=2987;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24
11	25101793	135182:2	T	[2:193213246[T	85	PASS	DISC_MAPQ=56;EVDNC=ASDIS;MAPQ=60;MATEID=135182:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_193207001_193232001_9C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:25:7:-85.82:85.82
11	25542940	580612:1	T	T[11:25543268[	55	PASS	EVDNC=ASSMB;HOMSEQ=AAAACCATGGATGT;MAPQ=60;MATEID=580612:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_25529001_25554001_47C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:49:55.7:55.7,0,65.6:21:0:-55.55:55.62
11	25543268	580612:2	A	]11:25542940]A	55	PASS	EVDNC=ASSMB;HOMSEQ=AAAACCATGGATGT;MAPQ=60;MATEID=580612:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_25529001_25554001_47C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:49:55.7:55.7,0,65.6:21:0:-55.55:55.62
11	26007882	580897:1	A	A[11:26008113[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=580897:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_11_25994501_26019501_114C;SPAN=231;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:11:5:-46.21:46.21
11	26008113	580897:2	C	]11:26007882]C	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=580897:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_11_25994501_26019501_114C;SPAN=231;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:11:5:-46.21:46.21
11	27635716	581498:1	G	G[11:27636049[	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=581498:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_27636001_27661001_23C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:10:6:66,6,0:22:0:-66.02:66.02
11	27636049	581498:2	C	]11:27635716]C	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=581498:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_27636001_27661001_23C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:10:6:66,6,0:22:0:-66.02:66.02
11	28985768	581840:1	T	T[11:28991341[	99	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=581840:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:28985768(+)-11:28991341(-)__11_28983501_29008501D;SPAN=5573;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:8:9.3:102.3,9.3,0:0:34:-102.3:102.3
11	28991341	581840:2	G	]11:28985768]G	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=581840:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:28985768(+)-11:28991341(-)__11_28983501_29008501D;SPAN=5573;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:8:9.3:102.3,9.3,0:0:34:-102.3:102.3
11	29946032	582095:1	T	T[11:29946920[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=582095:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_29939001_29964001_1C;SPAN=888;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:9:8:-32.3:32.3
11	29946920	582095:2	T	]11:29946032]T	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=582095:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_29939001_29964001_1C;SPAN=888;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:9:8:-32.3:32.3
11	30928615	998922:1	A	]Un_JTFH01000719v1_decoy:1230]A	89	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=998922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1562_1_1230_9C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12
11	31424301	582447:1	T	]11:31433215]T	26	PASS	EVDNC=ASSMB;INSERTION=ATCAAA;MAPQ=60;MATEID=582447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_31409001_31434001_21C;SPAN=8914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57
11	31433215	582447:2	A	A[11:31424301[	26	PASS	EVDNC=ASSMB;INSERTION=ATCAAA;MAPQ=60;MATEID=582447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_31409001_31434001_21C;SPAN=8914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57
11	32265107	582645:1	T	T[11:32265428[	23	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAGGTCTT;MAPQ=60;MATEID=582645:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_32242001_32267001_80C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:36:23:23,0,65.9:10:0:-22.89:24.13
11	32265428	582645:2	A	]11:32265107]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAGGTCTT;MAPQ=60;MATEID=582645:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_32242001_32267001_80C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:36:23:23,0,65.9:10:0:-22.89:24.13
11	32367805	582688:1	T	T[11:32369112[	38	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=582688:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:32367805(+)-11:32369112(-)__11_32364501_32389501D;SPAN=1307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
11	32369112	582688:2	A	]11:32367805]A	38	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=582688:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:32367805(+)-11:32369112(-)__11_32364501_32389501D;SPAN=1307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
11	37407661	781898:1	T	T[17:10235400[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=781898:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10216501_10241501_78C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:9:5:-33.01:33.01
11	37940512	584524:1	G	G[11:37940821[	35	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATGCTTATTAG;MAPQ=60;MATEID=584524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_37926001_37951001_124C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:13:0:-35.33:35.33
11	37940821	584524:2	A	]11:37940512]A	35	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATGCTTATTAG;MAPQ=60;MATEID=584524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_37926001_37951001_124C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:13:0:-35.33:35.33
11	38791106	452809:2	G	]8:51819021]G	82	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51819021(+)-11:38791106(-)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52
11	38791187	452806:2	T	T[8:51817582[	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452806:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51817582(-)-11:38791187(+)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:13:4.5:49.5,4.5,0:0:17:-49.51:49.51
11	39783577	585236:1	T	T[11:39783900[	64	PASS	EVDNC=ASSMB;HOMSEQ=CAATTTGTAATAT;MAPQ=60;MATEID=585236:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_39763501_39788501_72C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:30:11.3:64.1,0,11.3:22:0:-66.29:66.29
11	39783900	585236:2	C	]11:39783577]C	64	PASS	EVDNC=ASSMB;HOMSEQ=CAATTTGTAATAT;MAPQ=60;MATEID=585236:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_39763501_39788501_72C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:30:11.3:64.1,0,11.3:22:0:-66.29:66.29
11	40597161	585534:1	C	C[11:40597644[	19	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=585534:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40596501_40621501_146C;SPAN=483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
11	40597644	585534:2	A	]11:40597161]A	19	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=585534:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40596501_40621501_146C;SPAN=483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
11	40904857	585625:2	C	]6:32320801]C	39	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=585625:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40890501_40915501_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
11	41140440	585728:1	A	[11:41145493[A	14	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=ATTCCTACTGATCCATCAGAACCAA;MAPQ=60;MATEID=585728:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_41135501_41160501_22C;SPAN=5053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:6:3:-13.83:15.94
11	41145493	585728:2	A	[11:41140440[A	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTCCTACTGATCCATCAGAACCAA;MAPQ=60;MATEID=585728:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_41135501_41160501_22C;SPAN=5053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:6:3:-13.83:15.94
11	42248172	586023:1	G	G]11:42253506]	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCCTGG;MAPQ=60;MATEID=586023:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_14C;SPAN=5334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:10:7:-37.93:37.93
11	42248419	586024:1	C	[11:42253515[C	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586024:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_9C;SPAN=5096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:8:6:-35.24:35.24
11	42253506	586023:2	G	G]11:42248172]	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCCTGG;MAPQ=60;MATEID=586023:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_14C;SPAN=5334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:10:7:-37.93:37.93
11	42253515	586024:2	G	[11:42248419[G	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586024:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_9C;SPAN=5096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:8:6:-35.24:35.24
11	43634621	886988:1	T	T[20:57463311[	22	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=886988:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57452501_57477501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98
11	45377756	213057:2	C	[3:196591623[C	99	PASS	DISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACTGCAA;MAPQ=49;MATEID=213057:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_196588001_196613001_28C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:15:12.6:138.6,12.6,0:44:7:-138.6:138.6
11	45796115	586861:1	G	[11:45799999[G	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586861:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_45790501_45815501_20C;SPAN=3884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:28:11.9:58.1,0,11.9:14:13:-59.83:59.83
11	45798229	600590:1	T	T]11:86852881]	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=600590:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:45798229(+)-11:86852881(+)__11_86852501_86877501D;SPAN=41054652;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21
11	45799999	586861:2	C	[11:45796115[C	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586861:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_45790501_45815501_20C;SPAN=3884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:28:11.9:58.1,0,11.9:14:13:-59.83:59.83
11	46014697	586937:1	G	G[11:46015032[	51	PASS	EVDNC=ASSMB;HOMSEQ=AATAGTTATTCTG;MAPQ=60;MATEID=586937:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46011001_46036001_60C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:39:45.2:51.8,0,45.2:19:0:-51.77:51.77
11	46015032	586937:2	A	]11:46014697]A	51	PASS	EVDNC=ASSMB;HOMSEQ=AATAGTTATTCTG;MAPQ=60;MATEID=586937:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46011001_46036001_60C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:39:45.2:51.8,0,45.2:19:0:-51.77:51.77
11	46139466	586977:1	T	T[11:46140850[	99	PASS	EVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=586977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46133501_46158501_61C;SPAN=1384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:25:12.6:138.6,12.6,0:45:0:-138.6:138.6
11	46140850	586977:2	A	]11:46139466]A	99	PASS	EVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=586977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46133501_46158501_61C;SPAN=1384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:25:12.6:138.6,12.6,0:45:0:-138.6:138.6
11	46721219	587147:1	T	]11:46722062]T	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTC;MAPQ=60;MATEID=587147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46721501_46746501_23C;SPAN=843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:11:11:-52.81:52.81
11	46722062	587147:2	C	C[11:46721219[	52	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTC;MAPQ=60;MATEID=587147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46721501_46746501_23C;SPAN=843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:11:11:-52.81:52.81
11	47638400	587549:1	T	T]Un_KN707750v1_decoy:4718]	92	PASS	EVDNC=ASSMB;HOMSEQ=CGTCTCTACTAAAAATACAAAAAAT;INSERTION=CCACATTAGAATTGGGGGCTATGTTAAAGCCTTAAAAAGTACACTGAGGACTGCAGGAACTGTTGCTATGTTTATATATATATGCAATTTTTTAGAGACAGGGTCTCAC;MAPQ=60;MATEID=587549:2;MATENM=0;NM=1;NUMPARTS=5;SCTG=c_11_47628001_47653001_50C;SPAN=-1;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:19:8.4:92.4,8.4,0:30:0:-92.42:92.42
11	47866115	587678:1	T	T[11:47866643[	47	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=587678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_47848501_47873501_36C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
11	47866643	587678:2	T	]11:47866115]T	47	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=587678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_47848501_47873501_36C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
11	47893214	587688:2	C	C]11:15686349]	92	PASS	DISC_MAPQ=36;EVDNC=ASDIS;HOMSEQ=CCTCTGCCC;MAPQ=60;MATEID=587688:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_11_47873001_47898001_103C;SPAN=32206865;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:26:5:-92.42:92.42
11	48098519	587784:1	T	T[11:48098819[	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTATCTCTT;MAPQ=60;MATEID=587784:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48093501_48118501_81C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:21:5.7:62.7,5.7,0:15:8:-62.72:62.72
11	48098819	587784:2	T	]11:48098519]T	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTATCTCTT;MAPQ=60;MATEID=587784:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48093501_48118501_81C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:21:5.7:62.7,5.7,0:15:8:-62.72:62.72
11	48425278	587888:1	G	G[11:48425559[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATCAGATGGTTG;MAPQ=60;MATEID=587888:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48412001_48437001_21C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:15:12.6:138.6,12.6,0:42:4:-138.6:138.6
11	48425559	587888:2	A	]11:48425278]A	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAAATCAGATGGTTG;MAPQ=60;MATEID=587888:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48412001_48437001_21C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:15:12.6:138.6,12.6,0:42:4:-138.6:138.6
11	48579306	587957:1	C	C[11:48582731[	41	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=587957:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_48559001_48584001_185C;SPAN=3425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81
11	48582731	587957:2	T	]11:48579306]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=587957:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_48559001_48584001_185C;SPAN=3425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81
11	48692511	588007:1	C	C[11:48693522[	47	PASS	EVDNC=ASSMB;HOMSEQ=AAACCTTTCTTTTCATTC;MAPQ=60;MATEID=588007:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_11_48681501_48706501_76C;SPAN=1011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:17:0:-46.91:46.91
11	48693522	588007:2	A	]11:48692511]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AAACCTTTCTTTTCATTC;MAPQ=60;MATEID=588007:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_11_48681501_48706501_76C;SPAN=1011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:17:0:-46.91:46.91
11	48713228	588025:1	T	T[11:48715397[	82	PASS	DISC_MAPQ=38;EVDNC=ASDIS;HOMSEQ=TTCTCAGAAAGCTTCTTTCTAGTTTTTATTTGAAGATATTTCCTTTTT;MAPQ=60;MATEID=588025:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_11_48706001_48731001_50C;SPAN=2169;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:36:6.5:82.4,0,6.5:10:22:-85.84:85.84
11	48715397	588025:2	T	]11:48713228]T	82	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTCTCAGAAAGCTTCTTTCTAGTTTTTATTTGAAGATATTTCCTTTTT;MAPQ=60;MATEID=588025:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_11_48706001_48731001_50C;SPAN=2169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:36:6.5:82.4,0,6.5:10:22:-85.84:85.84
11	48788958	588088:1	G	G[11:48789585[	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCGTATTTCCCCAGAGGTCTCAATGGGCTCACAAATATCCCTTTG;MAPQ=60;MATEID=588088:2;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_11_48779501_48804501_8C;SPAN=627;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:30:10.8:118.8,10.8,0:25:16:-118.8:118.8
11	48789585	588088:2	A	]11:48788958]A	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCGTATTTCCCCAGAGGTCTCAATGGGCTCACAAATATCCCTTTG;MAPQ=60;MATEID=588088:1;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_11_48779501_48804501_8C;SPAN=627;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:30:10.8:118.8,10.8,0:25:16:-118.8:118.8
11	48859208	588242:1	A	A[11:48860190[	99	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGCATTCTCAGAAACGTCTTTGTGATGATTGCATTCA;MAPQ=60;MATEID=588242:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_11_48853001_48878001_28C;SPAN=982;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:15:14.7:161.7,14.7,0:31:33:-161.7:161.7
11	48860190	588242:2	T	]11:48859208]T	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGCATTCTCAGAAACGTCTTTGTGATGATTGCATTCA;MAPQ=60;MATEID=588242:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_11_48853001_48878001_28C;SPAN=982;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:15:14.7:161.7,14.7,0:31:33:-161.7:161.7
11	49817800	589101:1	C	]11:49852451]C	22	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=589101:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:49817800(-)-11:49852451(+)__11_49808501_49833501D;SPAN=34651;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
11	49852451	589101:2	G	G[11:49817800[	22	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=589101:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:49817800(-)-11:49852451(+)__11_49808501_49833501D;SPAN=34651;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
11	50147426	589366:1	C	C]11:50331713]	36	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=589366:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:50147426(+)-11:50331713(+)__11_50323001_50348001D;SPAN=184287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
11	50203333	589296:1	A	A[11:50206864[	36	PASS	EVDNC=ASSMB;HOMSEQ=GTGGCA;MAPQ=60;MATEID=589296:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50200501_50225501_52C;SPAN=3531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:36:36.2:36.2,0,52.7:14:0:-36.1:36.3
11	50206864	589296:2	G	]11:50203333]G	36	PASS	EVDNC=ASSMB;HOMSEQ=GTGGCA;MAPQ=60;MATEID=589296:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50200501_50225501_52C;SPAN=3531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:36:36.2:36.2,0,52.7:14:0:-36.1:36.3
11	50331713	589366:2	T	T]11:50147426]	36	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=589366:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:50147426(+)-11:50331713(+)__11_50323001_50348001D;SPAN=184287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
11	50725179	589562:1	A	A[11:50725446[	70	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=50;MATEID=589562:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50715001_50740001_108C;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:32:7.7:70.4,0,7.7:18:8:-72.78:72.78
11	50725446	589562:2	A	]11:50725179]A	70	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=589562:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50715001_50740001_108C;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:32:7.7:70.4,0,7.7:18:8:-72.78:72.78
11	51090773	589949:1	T	]11:52010440]T	23	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=589949:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51090773(-)-11:52010440(+)__11_51989001_52014001D;SPAN=919667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	51148091	589867:1	T	T[11:53674586[	26	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=589867:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51148091(+)-11:53674586(-)__11_51131501_51156501D;SPAN=2526495;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	51472984	590301:1	T	]11:53945514]T	26	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=590301:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51472984(-)-11:53945514(+)__11_53924501_53949501D;SPAN=2472530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	52010440	589949:2	T	T[11:51090773[	23	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=589949:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51090773(-)-11:52010440(+)__11_51989001_52014001D;SPAN=919667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	52680399	590204:1	C	]11:53344504]C	26	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=590204:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:52680399(-)-11:53344504(+)__11_53336501_53361501D;SPAN=664105;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	53344504	590204:2	A	A[11:52680399[	26	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=590204:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:52680399(-)-11:53344504(+)__11_53336501_53361501D;SPAN=664105;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	53674586	589867:2	T	]11:51148091]T	26	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=589867:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51148091(+)-11:53674586(-)__11_51131501_51156501D;SPAN=2526495;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	53945514	590301:2	G	G[11:51472984[	26	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=590301:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51472984(-)-11:53945514(+)__11_53924501_53949501D;SPAN=2472530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	54345246	590459:1	C	]11:54372905]C	29	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590459:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54345246(-)-11:54372905(+)__11_54365501_54390501D;SPAN=27659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71
11	54347483	590434:1	T	T[11:54403730[	59	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=590434:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347483(+)-11:54403730(-)__11_54341001_54366001D;SPAN=56247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34
11	54347532	590435:1	T	T[11:54406005[	23	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590435:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347532(+)-11:54406005(-)__11_54341001_54366001D;SPAN=58473;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	54369337	590539:1	C	C[11:54406068[	20	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=590539:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54369337(+)-11:54406068(-)__11_54390001_54415001D;SPAN=36731;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
11	54372905	590459:2	A	A[11:54345246[	29	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590459:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54345246(-)-11:54372905(+)__11_54365501_54390501D;SPAN=27659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71
11	54374313	590545:1	T	T[11:54409169[	39	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=590545:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374313(+)-11:54409169(-)__11_54390001_54415001D;SPAN=34856;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:7:3.6:39.6,3.6,0:0:13:-39.61:39.61
11	54374525	590490:1	G	]11:54421527]G	21	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=590490:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374525(-)-11:54421527(+)__11_54365501_54390501D;SPAN=47002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07
11	54403730	590434:2	T	]11:54347483]T	59	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=590434:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347483(+)-11:54403730(-)__11_54341001_54366001D;SPAN=56247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34
11	54406005	590435:2	T	]11:54347532]T	23	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=590435:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347532(+)-11:54406005(-)__11_54341001_54366001D;SPAN=58473;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	54406068	590539:2	A	]11:54369337]A	20	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=590539:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54369337(+)-11:54406068(-)__11_54390001_54415001D;SPAN=36731;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
11	54409169	590545:2	T	]11:54374313]T	39	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=590545:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374313(+)-11:54409169(-)__11_54390001_54415001D;SPAN=34856;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:7:3.6:39.6,3.6,0:0:13:-39.61:39.61
11	54415654	590614:1	C	]11:54549099]C	19	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=590614:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54415654(-)-11:54549099(+)__11_54537001_54562001D;SPAN=133445;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
11	54421527	590490:2	T	T[11:54374525[	21	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=590490:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374525(-)-11:54421527(+)__11_54365501_54390501D;SPAN=47002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07
11	54544141	590639:1	A	A[11:54548140[	69	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=590639:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54544141(+)-11:54548140(-)__11_54537001_54562001D;SPAN=3999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:25:3.6:69.3,3.6,0:0:22:-70.38:70.38
11	54548140	590639:2	T	]11:54544141]T	69	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=590639:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54544141(+)-11:54548140(-)__11_54537001_54562001D;SPAN=3999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:25:3.6:69.3,3.6,0:0:22:-70.38:70.38
11	54549099	590614:2	A	A[11:54415654[	19	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=590614:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54415654(-)-11:54549099(+)__11_54537001_54562001D;SPAN=133445;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
11	54929760	590741:1	C	]11:54937289]C	70	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGATTCTACAACAACAGTGTTTCCAAAC;MAPQ=60;MATEID=590741:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_54929001_54954001_5C;SPAN=7529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:16:14:-73.47:73.47
11	54937289	590741:2	C	C[11:54929760[	70	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGATTCTACAACAACAGTGTTTCCAAAC;MAPQ=60;MATEID=590741:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_54929001_54954001_5C;SPAN=7529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:16:14:-73.47:73.47
11	55239601	590830:1	T	T[11:55239896[	72	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAGTGCTTTGAGGCCTATGGTGGAAAAGGAAATAT;MAPQ=60;MATEID=590830:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_11_55223001_55248001_52C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:16:9:-72.62:72.62
11	55239896	590830:2	A	]11:55239601]A	72	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAGTGCTTTGAGGCCTATGGTGGAAAAGGAAATAT;MAPQ=60;MATEID=590830:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_11_55223001_55248001_52C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:16:9:-72.62:72.62
11	56497246	608067:1	G	[11:117255064[G	41	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=608067:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_117232501_117257501_23C;SPAN=60757818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:8:11:-42.92:42.92
11	58434792	591564:1	T	]11:58456014]T	30	PASS	DISC_MAPQ=29;EVDNC=ASDIS;INSERTION=GAGTTCAAGACCAGCTTGAAC;MAPQ=60;MATEID=591564:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_58432501_58457501_0C;SPAN=21222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:9:7:-30.82:30.82
11	58456014	591564:2	G	G[11:58434792[	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGTTCAAGACCAGCTTGAAC;MAPQ=60;MATEID=591564:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_58432501_58457501_0C;SPAN=21222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:9:7:-30.82:30.82
11	58826715	591625:1	T	T[11:58828547[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=591625:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_58824501_58849501_2C;SPAN=1832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21
11	58828547	591625:2	T	]11:58826715]T	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=591625:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_58824501_58849501_2C;SPAN=1832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21
11	59041829	591672:1	A	A[11:59042145[	75	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAGAATTCCAAGTGTTA;MAPQ=60;MATEID=591672:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_11_59020501_59045501_5C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:21:5:-75.92:75.92
11	59042145	591672:2	A	]11:59041829]A	75	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGAATTCCAAGTGTTA;MAPQ=60;MATEID=591672:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_11_59020501_59045501_5C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:21:5:-75.92:75.92
11	59681933	591775:2	G	[1:113684515[G	46	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=591775:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_59682001_59707001_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:8:13:-46.21:46.21
11	60986887	592149:1	G	]11:60990806]G	35	PASS	DISC_MAPQ=3;EVDNC=TSI_L;HOMSEQ=GGA;MAPQ=14;MATEID=592149:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_11_60980501_61005501_89C;SPAN=3919;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:25:26:35.9,0,26:13:4:-35.95:35.95
11	60990806	592149:2	A	A[11:60986887[	35	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGA;MAPQ=60;MATEID=592149:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_11_60980501_61005501_89C;SPAN=3919;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:25:26:35.9,0,26:13:4:-35.95:35.95
11	62009715	592412:1	C	]11:62010599]C	31	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=592412:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:62009715(-)-11:62010599(+)__11_62009501_62034501D;SPAN=884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:0:11:-31.6:31.6
11	62010599	592412:2	G	G[11:62009715[	31	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=592412:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:62009715(-)-11:62010599(+)__11_62009501_62034501D;SPAN=884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:0:11:-31.6:31.6
11	62074341	592458:1	G	G[14:81320430[	99	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=592458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62058501_62083501_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:31:9:99,9,0:33:0:-99.02:99.02
11	62143053	592515:1	C	]11:62143188]C	25	PASS	EVDNC=ASSMB;HOMSEQ=CCACACTTTTGGGATCACAGCTCCTCC;MAPQ=60;MATEID=592515:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62132001_62157001_20C;SPAN=135;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:39:25.4:25.4,0,71.6:11:0:-25.35:26.63
11	62143188	592515:2	C	C[11:62143053[	25	PASS	EVDNC=ASSMB;HOMSEQ=CCACACTTTTGGGATCACAGCTCCTCC;MAPQ=60;MATEID=592515:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62132001_62157001_20C;SPAN=135;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:39:25.4:25.4,0,71.6:11:0:-25.35:26.63
11	62177315	592530:1	A	A[11:62177614[	56	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=592530:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62156501_62181501_84C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:24:3.2:56,0,3.2:19:0:-58.57:58.57
11	62177614	592530:2	T	]11:62177315]T	56	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=592530:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62156501_62181501_84C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:24:3.2:56,0,3.2:19:0:-58.57:58.57
11	63559621	592884:1	A	A[Un_KN707705v1_decoy:1[	48	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=592884:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63553001_63578001_31C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68
11	63559621	988237:1	A	A[Un_KN707705v1_decoy:1[	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988237:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_556_1_4632_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91
11	63931435	592993:1	C	]11:63934472]C	99	PASS	EVDNC=ASSMB;INSERTION=TCAGGGTACAAAAGGT;MAPQ=60;MATEID=592993:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_26C;SPAN=3037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:34:9.9:108.9,9.9,0:36:0:-108.9:108.9
11	63931437	592994:1	G	G[11:63934182[	80	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=592994:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_63920501_63945501_50C;SPAN=2745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
11	63934182	592994:2	G	]11:63931437]G	80	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=592994:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_50C;SPAN=2745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
11	63934472	592993:2	G	G[11:63931435[	99	PASS	EVDNC=ASSMB;INSERTION=TCAGGGTACAAAAGGT;MAPQ=60;MATEID=592993:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_26C;SPAN=3037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:34:9.9:108.9,9.9,0:36:0:-108.9:108.9
11	65426022	593388:1	A	A[11:65426240[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=593388:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_65415001_65440001_11C;SPAN=218;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:37:22.7:22.7,0,68.9:10:0:-22.61:23.99
11	65426240	593388:2	T	]11:65426022]T	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=593388:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_65415001_65440001_11C;SPAN=218;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:37:22.7:22.7,0,68.9:10:0:-22.61:23.99
11	65440194	593780:1	C	]11:66536950]C	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=593780:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66517501_66542501_11C;SPAN=1096756;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:8:6:-32.57:32.57
11	65874744	593571:1	A	A[11:65876048[	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=593571:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:65874744(+)-11:65876048(-)__11_65856001_65881001D;SPAN=1304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
11	65876048	593571:2	T	]11:65874744]T	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=593571:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:65874744(+)-11:65876048(-)__11_65856001_65881001D;SPAN=1304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
11	66251221	593686:1	G	G]11:66252427]	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCATGCCCGGC;MAPQ=60;MATEID=593686:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_58C;SPAN=1206;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:10:4:-33.36:33.58
11	66251586	593687:1	A	[11:66252433[A	28	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCCCGTCTCTACTAAAAATACAAAA;MAPQ=60;MATEID=593687:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_48C;SPAN=847;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:4:8:-28.16:28.37
11	66252427	593686:2	C	C]11:66251221]	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCATGCCCGGC;MAPQ=60;MATEID=593686:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_66248001_66273001_58C;SPAN=1206;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:10:4:-33.36:33.58
11	66252433	593687:2	T	[11:66251586[T	28	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCCCGTCTCTACTAAAAATACAAAA;MAPQ=60;MATEID=593687:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_48C;SPAN=847;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:4:8:-28.16:28.37
11	66496959	716565:1	G	[14:103842390[G	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGG;MAPQ=60;MATEID=716565:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103831001_103856001_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:10:5:-34.32:34.32
11	66501326	716602:1	C	C]14:103910481]	33	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=716602:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103904501_103929501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:8:6:-33.92:33.92
11	66536950	593780:2	T	T[11:65440194[	32	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=593780:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66517501_66542501_11C;SPAN=1096756;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:8:6:-32.57:32.57
11	66609733	707094:1	T	]14:77757579]T	20	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=707094:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:66609733(-)-14:77757579(+)__14_77738501_77763501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:0:8:-20.79:20.87
11	66985273	593887:1	C	]11:67081007]C	33	PASS	DISC_MAPQ=52;EVDNC=ASDIS;INSERTION=TCA;MAPQ=60;MATEID=593887:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_67056501_67081501_1C;SPAN=95734;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:7:8:-33.01:33.01
11	67081007	593887:2	T	T[11:66985273[	33	PASS	DISC_MAPQ=54;EVDNC=ASDIS;INSERTION=TCA;MAPQ=30;MATEID=593887:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_67056501_67081501_1C;SPAN=95734;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:7:8:-33.01:33.01
11	67233499	593930:1	A	A[Un_JTFH01000424v1_decoy:1[	82	PASS	EVDNC=ASSMB;HOMSEQ=ACGTCTCTACTAAAAATACAA;MAPQ=60;MATEID=593930:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_11_67228001_67253001_41C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:27:0:-82.52:82.52
11	68515146	594493:1	C	]11:68643930]C	19	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=594493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515146(-)-11:68643930(+)__11_68624501_68649501D;SPAN=128784;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
11	68515404	594495:1	A	A[11:68644342[	21	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=594495:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515404(+)-11:68644342(-)__11_68624501_68649501D;SPAN=128938;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
11	68643930	594493:2	G	G[11:68515146[	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=594493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515146(-)-11:68643930(+)__11_68624501_68649501D;SPAN=128784;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
11	68644342	594495:2	T	]11:68515404]T	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=594495:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515404(+)-11:68644342(-)__11_68624501_68649501D;SPAN=128938;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
11	70136449	595239:1	C	C[11:70138382[	45	PASS	EVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=595239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_70119001_70144001_87C;SPAN=1933;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5
11	70138382	595239:2	C	]11:70136449]C	45	PASS	EVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=595239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_70119001_70144001_87C;SPAN=1933;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5
11	71600176	595839:1	T	]11:71900157]T	26	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=595839:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:71600176(-)-11:71900157(+)__11_71589001_71614001D;SPAN=299981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
11	71900157	595839:2	C	C[11:71600176[	26	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=595839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:71600176(-)-11:71900157(+)__11_71589001_71614001D;SPAN=299981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
11	72150565	596054:1	T	T[11:72150869[	99	PASS	EVDNC=ASSMB;HOMSEQ=TACTGAATTGTT;MAPQ=60;MATEID=596054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_72128001_72153001_76C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:29:13.2:145.2,13.2,0:48:0:-145.2:145.2
11	72150869	596054:2	T	]11:72150565]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TACTGAATTGTT;MAPQ=60;MATEID=596054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_72128001_72153001_76C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:29:13.2:145.2,13.2,0:48:0:-145.2:145.2
11	73967021	608936:1	T	[11:119253540[T	99	PASS	DISC_MAPQ=2;EVDNC=TSI_L;INSERTION=CATGCACCACCACACCCAGCTAA;MAPQ=60;MATEID=608936:2;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=TTT;SCTG=c_11_119241501_119266501_36C;SPAN=45286519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:15:11.4:125.4,11.4,0:37:7:-125.4:125.4
11	73998981	596583:1	G	]11:73999180]G	68	PASS	EVDNC=ASSMB;HOMSEQ=GTGCAGTGGTGT;MAPQ=60;MATEID=596583:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_73990001_74015001_13C;SPAN=199;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:73:68.6:68.6,0,114.8:27:0:-68.61:69.25
11	73999180	596583:2	T	T[11:73998981[	68	PASS	EVDNC=ASSMB;HOMSEQ=GTGCAGTGGTGT;MAPQ=60;MATEID=596583:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_73990001_74015001_13C;SPAN=199;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:73:68.6:68.6,0,114.8:27:0:-68.61:69.25
11	74821378	596838:1	G	G[11:74821679[	68	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAATACAAGTGCGGG;MAPQ=60;MATEID=596838:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_74798501_74823501_57C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:28:2:68,0,2:23:0:-71.75:71.75
11	74821679	596838:2	A	]11:74821378]A	68	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAATACAAGTGCGGG;MAPQ=60;MATEID=596838:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_74798501_74823501_57C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:28:2:68,0,2:23:0:-71.75:71.75
11	75259137	596962:1	C	C[11:75259412[	3	PASS	EVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCGAGATCGCGCC;MAPQ=60;MATEID=596962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75239501_75264501_20C;SPAN=275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753
11	75259412	596962:2	T	]11:75259137]T	3	PASS	EVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCGAGATCGCGCC;MAPQ=60;MATEID=596962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75239501_75264501_20C;SPAN=275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753
11	75299453	597034:1	A	]11:75426606]A	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=597034:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75411001_75436001_53C;SPAN=127153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:9:11:-38.69:38.69
11	75426606	597034:2	A	A[11:75299453[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=597034:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75411001_75436001_53C;SPAN=127153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:9:11:-38.69:38.69
11	75857851	597159:1	T	]11:75857976]T	19	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=597159:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75852001_75877001_15C;SPAN=125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48
11	75857976	597159:2	T	T[11:75857851[	19	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=597159:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75852001_75877001_15C;SPAN=125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48
11	76704166	597476:1	A	]11:76896079]A	13	PASS	EVDNC=ASSMB;INSERTION=GTCACGGGGA;MAPQ=60;MATEID=597476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_76881001_76906001_31C;SPAN=191913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
11	76896079	597476:2	T	T[11:76704166[	13	PASS	EVDNC=ASSMB;INSERTION=GTCACGGGGA;MAPQ=60;MATEID=597476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_76881001_76906001_31C;SPAN=191913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
11	78154046	153237:2	A	A]3:10636914]	37	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AAA;MAPQ=60;MATEID=153237:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_10633001_10658001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:10:4:-37.47:37.47
11	79416445	598284:1	A	]11:79479471]A	36	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=ATTTTCTTTA;MAPQ=60;MATEID=598284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_79478001_79503001_20C;SPAN=63026;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:4:10:-36.66:36.66
11	79479471	598284:2	A	A[11:79416445[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTTTCTTTA;MAPQ=60;MATEID=598284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_79478001_79503001_20C;SPAN=63026;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:4:10:-36.66:36.66
11	85506446	600483:1	T	[11:86544042[T	56	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TTTATTTCTGCCTTTATTTCATTATGTACCCAGTAATCATTCAGGAG;MAPQ=60;MATEID=600483:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_11_86534001_86559001_130C;SPAN=1037596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:15:5.1:56.1,5.1,0:15:5:-56.11:56.11
11	85506693	600484:1	G	G]11:86543942]	35	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=600484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:85506693(+)-11:86543942(+)__11_86534001_86559001D;SPAN=1037249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78
11	86543942	600484:2	C	C]11:85506693]	35	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=600484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:85506693(+)-11:86543942(+)__11_86534001_86559001D;SPAN=1037249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78
11	86544042	600483:2	C	[11:85506446[C	56	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTATTTCTGCCTTTATTTCATTATGTACCCAGTAATCATTCAGGAG;MAPQ=60;MATEID=600483:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_11_86534001_86559001_130C;SPAN=1037596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:15:5.1:56.1,5.1,0:15:5:-56.11:56.11
11	86686540	600538:2	A	A[4:130410267[	30	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=600538:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:130410267(-)-11:86686540(+)__11_86681001_86706001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:0:11:-30.15:30.15
11	86852881	600590:2	T	T]11:45798229]	46	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=600590:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:45798229(+)-11:86852881(+)__11_86852501_86877501D;SPAN=41054652;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21
11	90222202	601482:1	A	]11:90222426]A	8	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=601482:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_90209001_90234001_9C;SPAN=224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:29:8.3:8.3,0,64.4:5:0:-8.353:10.88
11	90222426	601482:2	A	A[11:90222202[	8	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=601482:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_90209001_90234001_9C;SPAN=224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:29:8.3:8.3,0,64.4:5:0:-8.353:10.88
11	91132847	601769:1	T	T[11:91134495[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAAAATATTTAAAAACATTTAAA;MAPQ=60;MATEID=601769:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_91115501_91140501_2C;SPAN=1648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:8:7:-40.41:40.41
11	91134495	601769:2	A	]11:91132847]A	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAAAATATTTAAAAACATTTAAA;MAPQ=60;MATEID=601769:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_91115501_91140501_2C;SPAN=1648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:8:7:-40.41:40.41
11	92076576	601925:1	G	]11:92094632]G	22	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=601925:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:92076576(-)-11:92094632(+)__11_92071001_92096001D;SPAN=18056;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
11	92094632	601925:2	A	A[11:92076576[	22	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=601925:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:92076576(-)-11:92094632(+)__11_92071001_92096001D;SPAN=18056;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
11	92329739	601999:1	A	A]Un_JTFH01000460v1_decoy:1678]	33	PASS	EVDNC=ASSMB;HOMSEQ=TTTTTATTTAATAAGAGCTCTTTATTTTTAGGGA;MAPQ=60;MATEID=601999:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_92316001_92341001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:8:3:33,3,0:11:0:-33.01:33.01
11	92329739	601998:1	A	[Un_KN707678v1_decoy:1[A	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=601998:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_92316001_92341001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21
11	93288079	602178:1	T	T[11:93288986[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=602178:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:93288079(+)-11:93288986(-)__11_93271501_93296501D;SPAN=907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
11	93288986	602178:2	A	]11:93288079]A	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=602178:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:93288079(+)-11:93288986(-)__11_93271501_93296501D;SPAN=907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
11	93946078	602374:1	T	T[11:93948258[	79	PASS	EVDNC=ASSMB;HOMSEQ=GCCTGTTGGATTCTT;MAPQ=60;MATEID=602374:2;MATENM=6;NM=6;NUMPARTS=2;SCTG=c_11_93933001_93958001_7C;SPAN=2180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22
11	93948258	602374:2	G	]11:93946078]G	79	PASS	EVDNC=ASSMB;HOMSEQ=GCCTGTTGGATTCTT;MAPQ=60;MATEID=602374:1;MATENM=6;NM=6;NUMPARTS=2;SCTG=c_11_93933001_93958001_7C;SPAN=2180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22
11	94734090	602559:1	T	]11:94920235]T	29	PASS	EVDNC=ASSMB;INSERTION=ATGAA;MAPQ=60;MATEID=602559:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94913001_94938001_11C;SPAN=186145;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
11	94893362	602552:1	C	C[11:94897268[	20	PASS	EVDNC=ASSMB;INSERTION=CAAA;MAPQ=60;MATEID=602552:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94888501_94913501_5C;SPAN=3906;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63
11	94897268	602552:2	T	]11:94893362]T	20	PASS	EVDNC=ASSMB;INSERTION=CAAA;MAPQ=60;MATEID=602552:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94888501_94913501_5C;SPAN=3906;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63
11	94920235	602559:2	A	A[11:94734090[	29	PASS	EVDNC=ASSMB;INSERTION=ATGAA;MAPQ=60;MATEID=602559:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94913001_94938001_11C;SPAN=186145;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
11	95633480	602711:1	G	G]11:95634028]	37	PASS	EVDNC=ASSMB;INSERTION=TATACTCAA;MAPQ=60;MATEID=602711:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_11_95623501_95648501_10C;SPAN=548;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93
11	95634028	602711:2	A	A]11:95633480]	37	PASS	EVDNC=ASSMB;INSERTION=TATACTCAA;MAPQ=60;MATEID=602711:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_11_95623501_95648501_10C;SPAN=548;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93
11	96004715	602819:2	T	[1:106943617[T	66	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=602819:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_95991001_96016001_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:12:6:66,6,0:18:14:-66.02:66.02
11	99733408	603835:2	C	[5:149173741[C	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=603835:1;MATENM=0;NM=13;NUMPARTS=2;SCTG=c_11_99715001_99740001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:9:6:-42.91:42.91
11	99819848	603886:1	A	A]11:99820649]	81	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=603886:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:99819848(+)-11:99820649(+)__11_99813001_99838001D;SPAN=801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:39:15.5:81.5,0,15.5:0:28:-83.87:83.87
11	99820649	603886:2	A	A]11:99819848]	81	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=603886:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:99819848(+)-11:99820649(+)__11_99813001_99838001D;SPAN=801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:39:15.5:81.5,0,15.5:0:28:-83.87:83.87
11	103330539	385665:2	A	]7:32186402]A	53	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=385665:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_32168501_32193501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:9:11:-55.29:55.29
11	104139755	605101:1	C	C[11:104140090[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAAATAAC;MAPQ=60;MATEID=605101:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_11_104125001_104150001_1C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:21:13.2:145.2,13.2,0:37:18:-145.2:145.2
11	104140090	605101:2	A	]11:104139755]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAAATAAC;MAPQ=60;MATEID=605101:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_11_104125001_104150001_1C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:21:13.2:145.2,13.2,0:37:18:-145.2:145.2
11	104397023	605173:1	A	A[11:104402502[	69	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=605173:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_104394501_104419501_2C;SPAN=5479;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32
11	104402502	605173:2	A	]11:104397023]A	69	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=605173:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_104394501_104419501_2C;SPAN=5479;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32
11	104457529	605189:1	G	G[11:104458049[	27	PASS	EVDNC=ASSMB;INSERTION=AAATGG;MAPQ=60;MATEID=605189:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_104443501_104468501_0C;SPAN=520;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73
11	104458049	605189:2	C	]11:104457529]C	27	PASS	EVDNC=ASSMB;INSERTION=AAATGG;MAPQ=60;MATEID=605189:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_104443501_104468501_0C;SPAN=520;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73
11	106272375	605556:1	C	[11:106273063[C	66	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=AATAATAGTCTAATTTTCTCTTGGTAGTCCAGATCACTATCCCCAACCAACACTGTAACTCCCTTCTTAGACTGTTGAATCAGAGGCTTGAGGGACATAAAGTGTAAACATGTATAATATTATATATAATATATAATATAATTGT;INSERTION=AGGGACATAAAGTGTAAACATGTATAATATTATA;MAPQ=60;MATEID=605556:2;MATENM=2;NM=2;NUMPARTS=3;REPSEQ=GGG;SCTG=c_11_106256501_106281501_13C;SPAN=688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:24:3.3:66,3.3,0:20:5:-67.03:67.03
11	106273063	605556:2	T	[11:106272375[T	66	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AATAATAGTCTAATTTTCTCTTGGTAGTCCAGATCACTATCCCCAACCAACACTGTAACTCCCTTCTTAGACTGTTGAATCAGAGGCTTGAGGGACATAAAGTGTAAACATGTATAATATTATATATAATATATAATATAATTGT;INSERTION=AGGGACATAAAGTGTAAACATGTATAATATTATA;MAPQ=60;MATEID=605556:1;MATENM=2;NM=2;NUMPARTS=3;REPSEQ=GGG;SCTG=c_11_106256501_106281501_13C;SPAN=688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:24:3.3:66,3.3,0:20:5:-67.03:67.03
11	107280913	605801:1	A	[11:107298910[A	23	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=605801:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:107280913(-)-11:107298910(-)__11_107285501_107310501D;SPAN=17997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:1:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	107298910	605801:2	T	[11:107280913[T	23	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=605801:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:107280913(-)-11:107298910(-)__11_107285501_107310501D;SPAN=17997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:1:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	117134598	608060:1	A	A]11:117210072]	56	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=608060:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:117134598(+)-11:117210072(+)__11_117208001_117233001D;SPAN=75474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:14:5.1:56.1,5.1,0:0:19:-56.11:56.11
11	117210072	608060:2	T	T]11:117134598]	56	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=608060:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:117134598(+)-11:117210072(+)__11_117208001_117233001D;SPAN=75474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:14:5.1:56.1,5.1,0:0:19:-56.11:56.11
11	117255064	608067:2	C	[11:56497246[C	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=608067:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_117232501_117257501_23C;SPAN=60757818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:8:11:-42.92:42.92
11	117515381	608868:1	T	]11:119023562]T	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGACTAGCC;MAPQ=60;MATEID=608868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_119021001_119046001_15C;SPAN=1508181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:6:8:-29.28:29.3
11	118947887	608808:1	A	]11:118948030]A	33	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=608808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_118947501_118972501_56C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:70:33.2:33.2,0,142.1:16:0:-33.14:37.03
11	118948030	608808:2	T	T[11:118947887[	33	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=608808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_118947501_118972501_56C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:70:33.2:33.2,0,142.1:16:0:-33.14:37.03
11	119023562	608868:2	T	T[11:117515381[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGACTAGCC;MAPQ=60;MATEID=608868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_119021001_119046001_15C;SPAN=1508181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:6:8:-29.28:29.3
11	119253540	608936:2	C	[11:73967021[C	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=CATGCACCACCACACCCAGCTAA;MAPQ=60;MATEID=608936:1;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=TTT;SCTG=c_11_119241501_119266501_36C;SPAN=45286519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:15:11.4:125.4,11.4,0:37:7:-125.4:125.4
11	119486278	609005:1	A	A[11:119486553[	99	PASS	EVDNC=ASSMB;INSERTION=CCTCTGCCCCTCACCTCTGTCTCTGGGTCTTTGCCACCTGCCTCCTCCTTTCCTCCCTCCTGGACCTGCTTTCCCTCTCACTTGCTGAAGATGAGGCCCCACCACTCTTGCTTTGATGAAATCATCCATTTATGTGTTTAATCTTATAGTATTATATGCATTCTTTTACATGATTTCAAAATCTTTTGGCAGCAAAATATGCATAAATGACTGCTTATAGATGAATGCACGTGCACGTGTGTGTTTGGGGAGGGGGT;MAPQ=60;MATEID=609005:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_11_119486501_119511501_30C;SPAN=275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:61:14:16.8:184.8,16.8,0:61:0:-184.8:184.8
11	119486553	609005:2	G	]11:119486278]G	99	PASS	EVDNC=ASSMB;INSERTION=CCTCTGCCCCTCACCTCTGTCTCTGGGTCTTTGCCACCTGCCTCCTCCTTTCCTCCCTCCTGGACCTGCTTTCCCTCTCACTTGCTGAAGATGAGGCCCCACCACTCTTGCTTTGATGAAATCATCCATTTATGTGTTTAATCTTATAGTATTATATGCATTCTTTTACATGATTTCAAAATCTTTTGGCAGCAAAATATGCATAAATGACTGCTTATAGATGAATGCACGTGCACGTGTGTGTTTGGGGAGGGGGT;MAPQ=60;MATEID=609005:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_11_119486501_119511501_30C;SPAN=275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:61:14:16.8:184.8,16.8,0:61:0:-184.8:184.8
11	128967524	611508:1	G	]11:129745642]G	72	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=611508:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_129727501_129752501_2C;SPAN=778118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:24:6.6:72.6,6.6,0:24:0:-72.62:72.62
11	129051675	611288:2	G	[3:128657391[G	17	PASS	DISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=GGCTGGG;MAPQ=60;MATEID=611288:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_129041501_129066501_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:4:3:-17.77:17.94
11	129745642	611508:2	A	A[11:128967524[	72	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=611508:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_129727501_129752501_2C;SPAN=778118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:24:6.6:72.6,6.6,0:24:0:-72.62:72.62
11	134934947	612620:1	T	T[11:134936118[	52	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=612620:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:134934947(+)-11:134936118(-)__11_134921501_134946501D;SPAN=1171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:0:18:-52.81:52.81
11	134936118	612620:2	C	]11:134934947]C	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=612620:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:134934947(+)-11:134936118(-)__11_134921501_134946501D;SPAN=1171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	520552	612793:1	T	]12:520645]T	50	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=612793:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_12_514501_539501_7C;SPAN=93;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33
12	520645	612793:2	G	G[12:520552[	50	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=612793:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_12_514501_539501_7C;SPAN=93;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33
12	6429248	614235:1	G	G[12:6429610[	42	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCCGCCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=614235:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_12_6419001_6444001_4C;SPAN=362;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:10:5:-42.91:42.91
12	6429610	614235:2	G	]12:6429248]G	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCCGCCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=614235:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_12_6419001_6444001_4C;SPAN=362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:10:5:-42.91:42.91
12	7083306	614416:1	T	]12:7083723]T	46	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=614416:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:7083306(-)-12:7083723(+)__12_7080501_7105501D;SPAN=417;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21
12	7083723	614416:2	N	N[12:7083306[	46	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=614416:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:7083306(-)-12:7083723(+)__12_7080501_7105501D;SPAN=417;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21
12	7677446	614599:1	T	[18:46441888[T	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGCCC;MAPQ=60;MATEID=614599:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_7668501_7693501_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:8:3:33,3,0:9:6:-33.01:33.01
12	8307812	189995:2	T	]3:130167162]T	23	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=189995:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167162(+)-12:8307812(-)__3_130144001_130169001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11
12	8308047	614848:2	T	T[3:130167390[	22	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=614848:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167390(-)-12:8308047(+)__12_8305501_8330501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
12	8864256	615005:1	T	T[12:8865272[	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTCATGCCTGT;MAPQ=60;MATEID=615005:2;MATENM=6;NM=25;NUMPARTS=2;SCTG=c_12_8844501_8869501_10C;SPAN=1016;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:5:5.7:62.7,5.7,0:15:9:-62.72:62.72
12	8865272	615005:2	G	]12:8864256]G	62	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GCTCATGCCTGT;MAPQ=60;MATEID=615005:1;MATENM=25;NM=6;NUMPARTS=2;SCTG=c_12_8844501_8869501_10C;SPAN=1016;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:5:5.7:62.7,5.7,0:15:9:-62.72:62.72
12	9319621	615195:1	G	G]12:9412218]	29	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=615195:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9319621(+)-12:9412218(+)__12_9408001_9433001D;SPAN=92597;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
12	9405219	615188:1	T	T[12:9406080[	56	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=615188:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9405219(+)-12:9406080(-)__12_9383501_9408501D;SPAN=861;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11
12	9406080	615188:2	C	]12:9405219]C	56	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=615188:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9405219(+)-12:9406080(-)__12_9383501_9408501D;SPAN=861;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11
12	9412218	615195:2	T	T]12:9319621]	29	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=615195:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9319621(+)-12:9412218(+)__12_9408001_9433001D;SPAN=92597;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
12	9480168	620653:1	G	G]12:31201038]	26	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=620653:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9480168(+)-12:31201038(+)__12_31188501_31213501D;SPAN=21720870;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
12	12653308	616055:1	G	[Un_KN707783v1_decoy:1[G	42	PASS	EVDNC=ASSMB;HOMSEQ=GGCATGGTGGCTCACGCCTGTA;MAPQ=60;MATEID=616055:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_12642001_12667001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91
12	14323917	616477:1	T	]X:38199383]T	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGAGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGG;MAPQ=60;MATEID=616477:2;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_12_14308001_14333001_21C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:7:3.3:36.3,3.3,0:6:7:-36.31:36.31
12	17463563	617131:1	A	A[12:17464684[	52	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=617131:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:17463563(+)-12:17464684(-)__12_17444001_17469001D;SPAN=1121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:3:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	17464684	617131:2	C	]12:17463563]C	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=617131:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:17463563(+)-12:17464684(-)__12_17444001_17469001D;SPAN=1121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:3:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	25803192	619289:1	G	[12:125316601[G	52	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=619289:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:25803192(-)-12:125316601(-)__12_25798501_25823501D;SPAN=99513409;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	28908761	620046:1	A	]12:28908886]A	72	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=620046:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_28885501_28910501_8C;SPAN=125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:37:19.4:72.2,0,19.4:25:0:-73.68:73.68
12	28908886	620046:2	T	T[12:28908761[	72	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=620046:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_28885501_28910501_8C;SPAN=125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:37:19.4:72.2,0,19.4:25:0:-73.68:73.68
12	30591611	620496:1	T	T[12:30593306[	23	PASS	EVDNC=ASSMB;INSERTION=CC;MAPQ=60;MATEID=620496:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_12_30576001_30601001_5C;SPAN=1695;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:8:0:-23.11:23.11
12	30593306	620496:2	A	]12:30591611]A	23	PASS	EVDNC=ASSMB;INSERTION=CC;MAPQ=60;MATEID=620496:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_12_30576001_30601001_5C;SPAN=1695;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:8:0:-23.11:23.11
12	31201038	620653:2	A	A]12:9480168]	26	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=620653:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9480168(+)-12:31201038(+)__12_31188501_31213501D;SPAN=21720870;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
12	32891138	621190:1	A	[12:32906808[A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=621190:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_32903501_32928501_118C;SPAN=15670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:13:6:-50.74:50.74
12	32906808	621190:2	A	[12:32891138[A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=621190:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_32903501_32928501_118C;SPAN=15670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:13:6:-50.74:50.74
12	33009535	621284:1	C	[12:33119661[C	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=621284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33099501_33124501_61C;SPAN=110126;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:28:1.2:72.6,1.2,0:16:12:-76:76
12	33118851	626174:1	A	A]12:45341570]	36	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=626174:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33118851(+)-12:45341570(+)__12_45325001_45350001D;SPAN=12222719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31
12	33119661	621284:2	A	[12:33009535[A	72	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=621284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33099501_33124501_61C;SPAN=110126;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:28:1.2:72.6,1.2,0:16:12:-76:76
12	33574300	621458:1	C	C[12:33574572[	10	PASS	EVDNC=ASSMB;HOMSEQ=GGGTGGC;MAPQ=60;MATEID=621458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33565001_33590001_95C;SPAN=272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:47:10.1:10.1,0,105.8:7:0:-9.896:14.75
12	33574572	621458:2	G	]12:33574300]G	10	PASS	EVDNC=ASSMB;HOMSEQ=GGGTGGC;MAPQ=60;MATEID=621458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33565001_33590001_95C;SPAN=272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:47:10.1:10.1,0,105.8:7:0:-9.896:14.75
12	33700205	621491:1	A	A[12:33700420[	64	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=621491:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_33687501_33712501_40C;SPAN=215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:29:8.3:64.4,0,8.3:22:0:-66.94:66.94
12	33700420	621491:2	A	]12:33700205]A	64	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=621491:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_33687501_33712501_40C;SPAN=215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:29:8.3:64.4,0,8.3:22:0:-66.94:66.94
12	33864471	669322:1	G	G]13:48282773]	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=669322:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33864471(+)-13:48282773(+)__13_48265001_48290001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
12	33946461	621610:1	A	A[12:33952570[	29	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=621610:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_33932501_33957501_126C;SPAN=6109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:6:9:-29.49:30.1
12	33946492	630191:1	G	[12:59699013[G	66	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=630191:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_59682001_59707001_18C;SPAN=25752521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:19:8:-66.02:66.02
12	33947951	627288:1	A	A[12:49261288[	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=627288:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49245001_49270001_33C;SPAN=15313337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
12	33952570	621610:2	A	]12:33946461]A	29	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=621610:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_33932501_33957501_126C;SPAN=6109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:6:9:-29.49:30.1
12	34680752	621866:1	T	]12:34681291]T	8	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATGGTAGAAAAGGAAATATCTTCATA;MAPQ=0;MATEID=621866:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_97C;SPAN=539;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:75:8.6:8.6,0,180.2:3:6:-8.627:18.06
12	34681291	621866:2	A	A[12:34680752[	8	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TATGGTAGAAAAGGAAATATCTTCATA;MAPQ=48;MATEID=621866:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_97C;SPAN=539;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:75:8.6:8.6,0,180.2:3:6:-8.627:18.06
12	34692129	621876:1	T	T[12:34696203[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTTTGTGATGTGTGCATTCAACTCACAGAGTTTAACCTT;MAPQ=60;MATEID=621876:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_34667501_34692501_252C;SPAN=4074;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:8:7:-36.31:36.31
12	34696203	621876:2	C	]12:34692129]C	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTTTGTGATGTGTGCATTCAACTCACAGAGTTTAACCTT;MAPQ=60;MATEID=621876:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_252C;SPAN=4074;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:8:7:-36.31:36.31
12	34775495	621965:1	T	]12:34802522]T	99	PASS	DISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=TATCTTCGTATAAAAACTAGACAGAATCATTCT;MAPQ=51;MATEID=621965:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_34790001_34815001_170C;SPAN=27027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:7:10.8:118.8,10.8,0:36:3:-118.8:118.8
12	34797611	621973:1	T	T[12:34804209[	31	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=621973:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:34797611(+)-12:34804209(-)__12_34790001_34815001D;SPAN=6598;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78
12	34802522	621965:2	T	T[12:34775495[	99	PASS	DISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=TATCTTCGTATAAAAACTAGACAGAATCATTCT;MAPQ=60;MATEID=621965:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_34790001_34815001_170C;SPAN=27027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:7:10.8:118.8,10.8,0:36:3:-118.8:118.8
12	34804209	621973:2	C	]12:34797611]C	31	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=621973:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:34797611(+)-12:34804209(-)__12_34790001_34815001D;SPAN=6598;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78
12	35065508	622080:1	G	G[12:36036026[	69	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=622080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35065508(+)-12:36036026(-)__12_35059501_35084501D;SPAN=970518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
12	35279799	622381:1	G	G[12:36171543[	23	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=622381:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35279799(+)-12:36171543(-)__12_36162001_36187001D;SPAN=891744;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
12	35320953	622592:1	G	G[12:36636654[	46	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=622592:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35320953(+)-12:36636654(-)__12_36627501_36652501D;SPAN=1315701;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:0:16:-46.21:46.21
12	35482224	622730:1	A	A[12:37010815[	36	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=622730:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35482224(+)-12:37010815(-)__12_36995001_37020001D;SPAN=1528591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:0:12:-38:38
12	35633983	622566:1	T	T[12:36580436[	22	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=622566:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35633983(+)-12:36580436(-)__12_36578501_36603501D;SPAN=946453;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
12	36036026	622080:2	C	]12:35065508]C	69	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=622080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35065508(+)-12:36036026(-)__12_35059501_35084501D;SPAN=970518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
12	36146423	622547:1	A	]12:36542570]A	34	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=622547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36146423(-)-12:36542570(+)__12_36529501_36554501D;SPAN=396147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:0:13:-34.2:34.27
12	36170378	622749:1	T	]12:37023657]T	39	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=622749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36170378(-)-12:37023657(+)__12_37019501_37044501D;SPAN=853279;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:3:3.6:39.6,3.6,0:0:13:-39.61:39.61
12	36171543	622381:2	A	]12:35279799]A	23	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=622381:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35279799(+)-12:36171543(-)__12_36162001_36187001D;SPAN=891744;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
12	36386608	622795:1	A	]12:37141680]A	42	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=622795:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36386608(-)-12:37141680(+)__12_37117501_37142501D;SPAN=755072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
12	36542570	622547:2	A	A[12:36146423[	34	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36146423(-)-12:36542570(+)__12_36529501_36554501D;SPAN=396147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:0:13:-34.2:34.27
12	36580436	622566:2	A	]12:35633983]A	22	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=622566:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35633983(+)-12:36580436(-)__12_36578501_36603501D;SPAN=946453;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
12	36636654	622592:2	C	]12:35320953]C	46	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622592:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35320953(+)-12:36636654(-)__12_36627501_36652501D;SPAN=1315701;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:0:16:-46.21:46.21
12	37010815	622730:2	T	]12:35482224]T	36	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=622730:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35482224(+)-12:37010815(-)__12_36995001_37020001D;SPAN=1528591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:0:12:-38:38
12	37023657	622749:2	A	A[12:36170378[	39	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36170378(-)-12:37023657(+)__12_37019501_37044501D;SPAN=853279;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:3:3.6:39.6,3.6,0:0:13:-39.61:39.61
12	37141680	622795:2	A	A[12:36386608[	42	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=622795:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36386608(-)-12:37141680(+)__12_37117501_37142501D;SPAN=755072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
12	37253832	622864:1	C	]12:37255340]C	37	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=622864:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37253832(-)-12:37255340(+)__12_37240001_37265001D;SPAN=1508;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44
12	37255340	622864:2	N	N[12:37253832[	37	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=622864:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37253832(-)-12:37255340(+)__12_37240001_37265001D;SPAN=1508;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44
12	37258962	622868:1	A	]12:37261422]A	13	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=622868:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37258962(-)-12:37261422(+)__12_37240001_37265001D;SPAN=2460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36
12	37261422	622868:2	G	G[12:37258962[	13	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=622868:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37258962(-)-12:37261422(+)__12_37240001_37265001D;SPAN=2460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36
12	37333223	623069:1	N	N[12:37334767[	99	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=CTTTTGATAGAGCAGTTTTGAAACACTGCTTTTGTAGAATCTGCTTGTGGATATACGGAACTGTTTGAGGAATTCGTTGTAAACGCAATATCTTCACATGCAAACTAGACGGAAGCATTCTCAGAAACTTCTTTGTGATGTGTACATTGAACGCACAGACTTGAACATTCCTTTTGAG;INSERTION=AGAGCAGTTTCGAAACAGTGTTTTTATAGTATCTGCAAGAGGATATGTGGAACGTTTTGAGGCCTATGATGGAAAAGGAAATATCTTCACATAAATACTAGATAGAAGCATTCTCACCAACTGCTTTGTGGTGTACGCATTCATCTGACAGAGTGGAACCCTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTAGAATCTGCAAGTGTTCAGTTAGAGCACTTTGAGGCCTATGTTGGAAAAAGAAAT;MAPQ=60;MATEID=623069:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_12_37313501_37338501_237C;SECONDARY;SPAN=1544;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:11:13.2:145.2,13.2,0:46:5:-145.2:145.2
12	37334767	623069:2	N	]12:37333223]N	99	PASS	DISC_MAPQ=52;EVDNC=TSI_G;HOMSEQ=CTTTTGATAGAGCAGTTTTGAAACACTGCTTTTGTAGAATCTGCTTGTGGATATACGGAACTGTTTGAGGAATTCGTTGTAAACGCAATATCTTCACATGCAAACTAGACGGAAGCATTCTCAGAAACTTCTTTGTGATGTGTACATTGAACGCACAGACTTGAACATTCCTTTTGAG;INSERTION=AGAGCAGTTTCGAAACAGTGTTTTTATAGTATCTGCAAGAGGATATGTGGAACGTTTTGAGGCCTATGATGGAAAAGGAAATATCTTCACATAAATACTAGATAGAAGCATTCTCACCAACTGCTTTGTGGTGTACGCATTCATCTGACAGAGTGGAACCCTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTAGAATCTGCAAGTGTTCAGTTAGAGCACTTTGAGGCCTATGTTGGAAAAAGAAAT;MAPQ=60;MATEID=623069:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_12_37313501_37338501_237C;SECONDARY;SPAN=1544;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:11:13.2:145.2,13.2,0:46:5:-145.2:145.2
12	37365284	623185:1	A	A[12:37367892[	44	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=623185:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37365284(+)-12:37367892(-)__12_37362501_37387501D;SPAN=2608;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:19:1.4:44.3,0,1.4:0:15:-46.2:46.2
12	37367892	623185:2	T	]12:37365284]T	44	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=623185:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37365284(+)-12:37367892(-)__12_37362501_37387501D;SPAN=2608;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:19:1.4:44.3,0,1.4:0:15:-46.2:46.2
12	37597426	623343:1	T	T[12:37600816[	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAGCAGTTTTGAAACACT;MAPQ=60;MATEID=623343:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_37583001_37608001_116C;SPAN=3390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:9:5:-41.11:41.11
12	37600816	623343:2	A	]12:37597426]A	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAGCAGTTTTGAAACACT;MAPQ=60;MATEID=623343:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_37583001_37608001_116C;SPAN=3390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:9:5:-41.11:41.11
12	37616372	623373:1	T	T[12:37624294[	33	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAATGCTTTGAGGCCT;MAPQ=0;MATEID=623373:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_37607501_37632501_47C;SPAN=7922;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:6:10:-33.36:33.58
12	37624294	623373:2	A	]12:37616372]A	33	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAATGCTTTGAGGCCT;MAPQ=60;MATEID=623373:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_37607501_37632501_47C;SPAN=7922;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:6:10:-33.36:33.58
12	37828951	623821:1	G	]12:37833257]G	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=623821:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37828951(-)-12:37833257(+)__12_37828001_37853001D;SPAN=4306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:57:55:15.9:174.9,15.9,0:0:57:-174.9:174.9
12	37833257	623821:2	G	G[12:37828951[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=623821:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37828951(-)-12:37833257(+)__12_37828001_37853001D;SPAN=4306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:57:55:15.9:174.9,15.9,0:0:57:-174.9:174.9
12	37924184	623856:1	T	[12:37924724[T	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=623856:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_37901501_37926501_41C;SPAN=540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:41:38:38,0,64.4:12:10:-37.99:38.38
12	37924724	623856:2	T	[12:37924184[T	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=623856:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_37901501_37926501_41C;SPAN=540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:41:38:38,0,64.4:12:10:-37.99:38.38
12	39152300	926030:1	C	[X:11714300[C	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTTAGCAGC;MAPQ=60;MATEID=926030:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_11711001_11736001_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:21:14:14,0,37.1:3:6:-13.9:14.56
12	39714095	624468:1	A	]12:39714154]A	46	PASS	EVDNC=ASSMB;INSERTION=GTATGTATACGTGTATATGTATATATGTACATACGTATAT;MAPQ=60;MATEID=624468:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_39690001_39715001_31C;SPAN=59;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:36:42.8:46.1,0,42.8:17:0:-46:46
12	39714154	624468:2	C	C[12:39714095[	46	PASS	EVDNC=ASSMB;INSERTION=GTATGTATACGTGTATATGTATATATGTACATACGTATAT;MAPQ=60;MATEID=624468:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_39690001_39715001_31C;SPAN=59;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:36:42.8:46.1,0,42.8:17:0:-46:46
12	39761555	624525:1	T	]12:39850525]T	46	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TTAATTAATTGCTATATATGACTAATTAAGATATA;MAPQ=60;MATEID=624525:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_39837001_39862001_14C;SPAN=88970;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:11:7:-46.21:46.21
12	39850525	624525:2	A	A[12:39761555[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTAATTGCTATATATGACTAATTAAGATATA;MAPQ=60;MATEID=624525:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_39837001_39862001_14C;SPAN=88970;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:11:7:-46.21:46.21
12	39931333	624573:1	A	A[12:40006564[	52	PASS	EVDNC=ASSMB;INSERTION=TGCCTAATGCCTGCTACTAAATGCCTACTACTAATGCCTGCTACTAATGCCTGCTAC;MAPQ=60;MATEID=624573:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_39984001_40009001_12C;SPAN=75231;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:15:4.8:52.8,4.8,0:18:0:-52.81:52.81
12	40006564	624573:2	T	]12:39931333]T	52	PASS	EVDNC=ASSMB;INSERTION=TGCCTAATGCCTGCTACTAAATGCCTACTACTAATGCCTGCTACTAATGCCTGCTAC;MAPQ=60;MATEID=624573:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_39984001_40009001_12C;SPAN=75231;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:15:4.8:52.8,4.8,0:18:0:-52.81:52.81
12	40480965	624749:1	A	A[12:40482623[	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGGAGTGA;MAPQ=16;MATEID=624749:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_40474001_40499001_228C;SPAN=1658;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:41:44.6:44.6,0,57.8:6:14:-44.59:44.7
12	40482173	624751:1	C	]12:40485152]C	34	PASS	EVDNC=ASSMB;HOMSEQ=CAGGAACAACTGGATT;MAPQ=60;MATEID=624751:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_40474001_40499001_66C;SPAN=2979;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03
12	40482623	624749:2	C	]12:40480965]C	44	PASS	DISC_MAPQ=50;EVDNC=ASDIS;INSERTION=GCTGGAGTGA;MAPQ=60;MATEID=624749:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_40474001_40499001_228C;SPAN=1658;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:41:44.6:44.6,0,57.8:6:14:-44.59:44.7
12	40485152	624751:2	T	T[12:40482173[	34	PASS	EVDNC=ASSMB;HOMSEQ=CAGGAACAACTGGATT;MAPQ=60;MATEID=624751:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_40474001_40499001_66C;SPAN=2979;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03
12	40749548	624895:1	G	G[12:40749805[	49	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=624895:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_40743501_40768501_23C;SPAN=257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
12	40749805	624895:2	G	]12:40749548]G	49	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=624895:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_40743501_40768501_23C;SPAN=257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
12	42898157	400359:2	C	[7:65418509[C	75	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=400359:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418509(-)-12:42898157(-)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92
12	42898470	400358:2	G	G]7:65418384]	52	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=400358:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418384(+)-12:42898470(+)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:6:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	43583657	625822:1	A	A[12:43585747[	42	PASS	EVDNC=ASSMB;HOMSEQ=AAGACATTCCA;MAPQ=60;MATEID=625822:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_43585501_43610501_31C;SPAN=2090;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91
12	43585747	625822:2	A	]12:43583657]A	42	PASS	EVDNC=ASSMB;HOMSEQ=AAGACATTCCA;MAPQ=60;MATEID=625822:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_43585501_43610501_31C;SPAN=2090;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91
12	45341570	626174:2	T	T]12:33118851]	36	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=626174:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33118851(+)-12:45341570(+)__12_45325001_45350001D;SPAN=12222719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31
12	45509370	626202:1	A	A[12:45516157[	85	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=626202:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_12_45496501_45521501_3C;SPAN=6787;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	45516157	626202:2	T	]12:45509370]T	85	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=626202:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_12_45496501_45521501_3C;SPAN=6787;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	46181222	626399:1	T	]12:46213999]T	42	PASS	EVDNC=ASSMB;INSERTION=CCATGATC;MAPQ=60;MATEID=626399:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_46207001_46232001_27C;SPAN=32777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
12	46213999	626399:2	A	A[12:46181222[	42	PASS	EVDNC=ASSMB;INSERTION=CCATGATC;MAPQ=60;MATEID=626399:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_46207001_46232001_27C;SPAN=32777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
12	48331698	627120:1	T	T[12:48334598[	19	PASS	EVDNC=ASSMB;HOMSEQ=GTAATTAAGTTTATT;MAPQ=60;MATEID=627120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_48314001_48339001_68C;SPAN=2900;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
12	48334598	627120:2	G	]12:48331698]G	19	PASS	EVDNC=ASSMB;HOMSEQ=GTAATTAAGTTTATT;MAPQ=60;MATEID=627120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_48314001_48339001_68C;SPAN=2900;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
12	49261288	627288:2	C	]12:33947951]C	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=627288:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49245001_49270001_33C;SPAN=15313337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
12	49498997	187839:2	G	G[3:122934047[	29	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=187839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:122934047(-)-12:49498997(+)__3_122916501_122941501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
12	49788828	627372:1	C	C]12:49789140]	79	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TGAACCCAGGAGG;INSERTION=CAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCG;MAPQ=60;MATEID=627372:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_12_49784001_49809001_96C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:26:7.2:79.2,7.2,0:19:8:-79.22:79.22
12	49789140	627372:2	A	A]12:49788828]	79	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TGAACCCAGGAGG;INSERTION=CAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCG;MAPQ=60;MATEID=627372:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_12_49784001_49809001_96C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:26:7.2:79.2,7.2,0:19:8:-79.22:79.22
12	49877510	627407:1	A	]12:49877621]A	81	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=627407:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_49857501_49882501_91C;SPAN=111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:64:77.9:81.2,0,77.9:30:0:-81.04:81.04
12	49877621	627407:2	G	G[12:49877510[	81	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=627407:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_49857501_49882501_91C;SPAN=111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:64:77.9:81.2,0,77.9:30:0:-81.04:81.04
12	49898240	627456:1	C	]12:49898348]C	24	PASS	EVDNC=ASSMB;HOMSEQ=CCCGGCT;MAPQ=60;MATEID=627456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49882001_49907001_9C;SPAN=108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:55:24.2:24.2,0,113.3:12:0:-24.15:27.49
12	49898348	627456:2	T	T[12:49898240[	24	PASS	EVDNC=ASSMB;HOMSEQ=CCCGGCT;MAPQ=60;MATEID=627456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49882001_49907001_9C;SPAN=108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:55:24.2:24.2,0,113.3:12:0:-24.15:27.49
12	50114523	627507:1	A	A[12:50115022[	11	PASS	DISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGA;MAPQ=60;MATEID=627507:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_50102501_50127501_20C;SPAN=499;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:18:11.6:11.6,0,31.4:2:4:-11.45:12.06
12	50115022	627507:2	T	]12:50114523]T	11	PASS	DISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGA;MAPQ=60;MATEID=627507:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_50102501_50127501_20C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:18:11.6:11.6,0,31.4:2:4:-11.45:12.06
12	52355941	628411:1	G	]12:52358129]G	22	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=628411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52332001_52357001_104C;SPAN=2188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
12	52358129	628411:2	G	G[12:52355941[	22	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=628411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52332001_52357001_104C;SPAN=2188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
12	52358976	449149:2	A	]8:35555406]A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=449149:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:35555406(+)-12:52358976(-)__8_35549501_35574501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
12	52846424	628594:1	C	]12:53082540]C	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGG;MAPQ=60;MATEID=628594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52846501_52871501_22C;SPAN=236116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:5:7:-33.01:33.01
12	53082540	628594:2	T	T[12:52846424[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGG;MAPQ=12;MATEID=628594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52846501_52871501_22C;SPAN=236116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:5:7:-33.01:33.01
12	53612036	628841:1	C	C[12:53612319[	3	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=628841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_53606001_53631001_7C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:35:3.5:3.5,0,82.7:4:0:-3.366:7.934
12	53612319	628841:2	C	]12:53612036]C	3	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=628841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_53606001_53631001_7C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:35:3.5:3.5,0,82.7:4:0:-3.366:7.934
12	54231570	629060:1	A	A]12:54239608]	30	PASS	DISC_MAPQ=47;EVDNC=ASDIS;MAPQ=60;MATEID=629060:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_54218501_54243501_67C;SPAN=8038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:7:6:-30.06:30.47
12	54239608	629060:2	T	T]12:54231570]	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=629060:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_54218501_54243501_67C;SPAN=8038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:7:6:-30.06:30.47
12	56596312	629585:1	G	G[15:39702424[	85	PASS	EVDNC=ASSMB;INSERTION=AGCTAGGTGGATTTTCTCTTC;MAPQ=60;MATEID=629585:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_56595001_56620001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	59699013	630191:2	C	[12:33946492[C	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=630191:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_59682001_59707001_18C;SPAN=25752521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:19:8:-66.02:66.02
12	60018568	630268:1	T	T[12:60019728[	36	PASS	EVDNC=ASSMB;HOMSEQ=GAAT;MAPQ=50;MATEID=630268:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_60000501_60025501_61C;SPAN=1160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29
12	60019728	630268:2	G	]12:60018568]G	36	PASS	EVDNC=ASSMB;HOMSEQ=GAAT;MAPQ=60;MATEID=630268:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_60000501_60025501_61C;SPAN=1160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29
12	60128185	630298:1	T	T[12:60131254[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=630298:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:60128185(+)-12:60131254(-)__12_60123001_60148001D;SPAN=3069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3
12	60131254	630298:2	A	]12:60128185]A	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=630298:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:60128185(+)-12:60131254(-)__12_60123001_60148001D;SPAN=3069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3
12	61767342	630769:1	A	[12:61774625[A	59	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTCATTTTTT;MAPQ=60;MATEID=630769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_61764501_61789501_34C;SPAN=7283;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:48:59.3:59.3,0,59.3:18:11:-59.13:59.13
12	61774625	630769:2	A	[12:61767342[A	59	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTCATTTTTT;MAPQ=60;MATEID=630769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_61764501_61789501_34C;SPAN=7283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:48:59.3:59.3,0,59.3:18:11:-59.13:59.13
12	61805169	630789:1	T	]17:59896324]T	17	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=630789:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_61789001_61814001_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
12	62394097	630980:1	A	]12:62450606]A	33	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=630980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_62377001_62402001_36C;SPAN=56509;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:35:33.2:33.2,0,53:11:11:-33.08:33.38
12	62450606	630980:2	A	A[12:62394097[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=630980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_62377001_62402001_36C;SPAN=56509;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:35:33.2:33.2,0,53:11:11:-33.08:33.38
12	62838638	631147:1	C	C[12:62838950[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAATAGCTTCTC;MAPQ=60;MATEID=631147:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_62818001_62843001_7C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:28:9.3:102.3,9.3,0:34:0:-102.3:102.3
12	62838950	631147:2	A	]12:62838638]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAATAGCTTCTC;MAPQ=60;MATEID=631147:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_62818001_62843001_7C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:28:9.3:102.3,9.3,0:34:0:-102.3:102.3
12	63545291	631382:1	G	G[12:63740374[	17	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=631382:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:63545291(+)-12:63740374(-)__12_63528501_63553501D;SPAN=195083;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
12	63552952	631386:1	G	G[12:63553177[	85	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=631386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_63528501_63553501_13C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	63553177	631386:2	A	]12:63552952]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=631386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_63528501_63553501_13C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	63740374	631382:2	T	]12:63545291]T	17	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=631382:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:63545291(+)-12:63740374(-)__12_63528501_63553501D;SPAN=195083;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
12	65229310	632064:1	T	T[12:110829790[	17	PASS	EVDNC=ASSMB;INSERTION=AAG;MAPQ=60;MATEID=632064:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_65219001_65244001_43C;SPAN=45600480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56
12	66737454	632476:1	T	T[12:66738084[	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=632476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_66738001_66763001_6C;SPAN=630;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89
12	66738084	632476:2	A	]12:66737454]A	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=632476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_66738001_66763001_6C;SPAN=630;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89
12	69153592	648631:1	A	]12:118295227]A	22	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=648631:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:69153592(-)-12:118295227(+)__12_118286001_118311001D;SPAN=49141635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
12	70201197	633448:1	A	A[12:70203785[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=633448:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70201197(+)-12:70203785(-)__12_70192501_70217501D;SPAN=2588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:25:12:132,12,0:0:43:-132:132
12	70203785	633448:2	A	]12:70201197]A	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633448:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70201197(+)-12:70203785(-)__12_70192501_70217501D;SPAN=2588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:25:12:132,12,0:0:43:-132:132
12	70478576	633549:1	T	T[12:70484436[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633549:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70478576(+)-12:70484436(-)__12_70462001_70487001D;SPAN=5860;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:10:10.5:115.5,10.5,0:0:38:-115.5:115.5
12	70484436	633549:2	T	]12:70478576]T	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633549:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70478576(+)-12:70484436(-)__12_70462001_70487001D;SPAN=5860;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:10:10.5:115.5,10.5,0:0:38:-115.5:115.5
12	71139014	633690:1	A	[12:71139975[A	76	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAAAGTACAAAT;MAPQ=60;MATEID=633690:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_12_71123501_71148501_12C;SPAN=961;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:35:10.1:76.1,0,10.1:14:15:-78.63:78.63
12	71139975	633690:2	T	[12:71139014[T	76	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAAAGTACAAAT;MAPQ=60;MATEID=633690:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_12_71123501_71148501_12C;SPAN=961;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:35:10.1:76.1,0,10.1:14:15:-78.63:78.63
12	71795498	633859:1	T	T[12:71796793[	92	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633859:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:71795498(+)-12:71796793(-)__12_71785001_71810001D;SPAN=1295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:8:8.4:92.4,8.4,0:0:30:-92.42:92.42
12	71796793	633859:2	A	]12:71795498]A	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=633859:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:71795498(+)-12:71796793(-)__12_71785001_71810001D;SPAN=1295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:8:8.4:92.4,8.4,0:0:30:-92.42:92.42
12	71962902	633883:1	A	A[12:71964337[	85	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=633883:2;MATENM=27;NM=11;NUMPARTS=2;SCTG=c_12_71956501_71981501_6C;SPAN=1435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:4:7.8:85.8,7.8,0:4:25:-85.82:85.82
12	71964337	633883:2	C	]12:71962902]C	85	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=633883:1;MATENM=11;NM=27;NUMPARTS=2;SCTG=c_12_71956501_71981501_6C;SPAN=1435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:4:7.8:85.8,7.8,0:4:25:-85.82:85.82
12	72313309	633922:1	A	A[12:72313827[	18	PASS	EVDNC=ASSMB;INSERTION=CAGATTTCTTCC;MAPQ=60;MATEID=633922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_72299501_72324501_11C;SPAN=518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
12	72313827	633922:2	C	]12:72313309]C	18	PASS	EVDNC=ASSMB;INSERTION=CAGATTTCTTCC;MAPQ=60;MATEID=633922:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_72299501_72324501_11C;SPAN=518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
12	73620587	634200:2	T	]7:125624166]T	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATA;MAPQ=60;MATEID=634200:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_12_73598001_73623001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:24:6.9:75.9,6.9,0:24:7:-75.92:75.92
12	74298655	634412:1	A	]12:74480096]A	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=634412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_74480001_74505001_12C;SPAN=181441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:11:11:-43.34:43.34
12	74480096	634412:2	A	A[12:74298655[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=634412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_74480001_74505001_12C;SPAN=181441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:11:11:-43.34:43.34
12	74567779	634720:1	G	]12:75488812]G	24	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=634720:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_75484501_75509501_20C;SPAN=921033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
12	75488812	634720:2	C	C[12:74567779[	24	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=634720:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_75484501_75509501_20C;SPAN=921033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
12	75757901	634777:1	G	G[12:75764869[	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=634777:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:75757901(+)-12:75764869(-)__12_75754001_75779001D;SPAN=6968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:8:8.4:92.4,8.4,0:0:30:-92.42:92.42
12	75764869	634777:2	A	]12:75757901]A	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=634777:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:75757901(+)-12:75764869(-)__12_75754001_75779001D;SPAN=6968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:8:8.4:92.4,8.4,0:0:30:-92.42:92.42
12	77990109	635363:1	T	[12:77994064[T	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TTTA;MAPQ=60;MATEID=635363:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_12_77983501_78008501_0C;SPAN=3955;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:52:34:14.4:158.4,14.4,0:41:18:-158.4:158.4
12	77994064	635363:2	T	[12:77990109[T	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TTTA;MAPQ=60;MATEID=635363:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_12_77983501_78008501_0C;SPAN=3955;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:52:34:14.4:158.4,14.4,0:41:18:-158.4:158.4
12	80454444	635863:1	A	[12:80461951[A	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=635863:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:80454444(-)-12:80461951(-)__12_80433501_80458501D;SPAN=7507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
12	80461951	635863:2	G	[12:80454444[G	23	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=635863:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:80454444(-)-12:80461951(-)__12_80433501_80458501D;SPAN=7507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
12	83565451	636682:1	C	C[12:83565755[	29	PASS	EVDNC=ASSMB;HOMSEQ=AAGACTTGTACTC;MAPQ=60;MATEID=636682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_83545001_83570001_69C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
12	83565755	636682:2	A	]12:83565451]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AAGACTTGTACTC;MAPQ=60;MATEID=636682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_83545001_83570001_69C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
12	83648505	636707:1	T	T[12:83648804[	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAACAAATTT;MAPQ=60;MATEID=636707:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_83643001_83668001_134C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31
12	83648804	636707:2	A	]12:83648505]A	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAACAAATTT;MAPQ=60;MATEID=636707:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_83643001_83668001_134C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31
12	84058958	636884:1	C	]12:84059687]C	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=636884:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84059501_84084501_4C;SPAN=729;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:6:10:-38.44:38.44
12	84059687	636884:2	T	T[12:84058958[	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=636884:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84059501_84084501_4C;SPAN=729;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:6:10:-38.44:38.44
12	84199335	636931:1	A	A[12:84202233[	85	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCA;MAPQ=60;MATEID=636931:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84182001_84207001_67C;SPAN=2898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	84202233	636931:2	G	]12:84199335]G	85	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCA;MAPQ=60;MATEID=636931:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84182001_84207001_67C;SPAN=2898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	86129547	637649:1	T	T[12:86129858[	79	PASS	EVDNC=ASSMB;HOMSEQ=CACAATCTTT;MAPQ=60;MATEID=637649:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_86117501_86142501_101C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22
12	86129858	637649:2	C	]12:86129547]C	79	PASS	EVDNC=ASSMB;HOMSEQ=CACAATCTTT;MAPQ=60;MATEID=637649:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_86117501_86142501_101C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22
12	86259796	988096:1	T	]Un_KN707677v1_decoy:7267]T	89	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988096:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_528_1_7267_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12
12	90223562	638867:1	T	]12:90223665]T	48	PASS	EVDNC=ASSMB;HOMSEQ=TATATATCCTATATATATACATATATACTATAGT;MAPQ=35;MATEID=638867:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_90209001_90234001_76C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74
12	90223665	638867:2	T	T[12:90223562[	48	PASS	EVDNC=ASSMB;HOMSEQ=TATATATCCTATATATATACATATATACTATAGT;MAPQ=60;MATEID=638867:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_90209001_90234001_76C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74
12	93500781	640053:1	C	]12:93501896]C	83	PASS	EVDNC=ASSMB;INSERTION=AAATTAAA;MAPQ=60;MATEID=640053:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_93492001_93517001_1C;SPAN=1115;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92
12	93501029	640054:1	G	G[12:93501904[	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=640054:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_12_93492001_93517001_80C;SPAN=875;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:43:7.7:100.1,0,7.7:34:0:-104.8:104.8
12	93501896	640053:2	T	T[12:93500781[	83	PASS	EVDNC=ASSMB;INSERTION=AAATTAAA;MAPQ=60;MATEID=640053:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_93492001_93517001_1C;SPAN=1115;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92
12	93501904	640054:2	G	]12:93501029]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=640054:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_12_93492001_93517001_80C;SPAN=875;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:43:7.7:100.1,0,7.7:34:0:-104.8:104.8
12	93964568	640176:1	G	G[12:93964865[	25	PASS	EVDNC=ASSMB;HOMSEQ=AGAATTAGGAGCTGGG;MAPQ=60;MATEID=640176:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_93957501_93982501_64C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66
12	93964865	640176:2	A	]12:93964568]A	25	PASS	EVDNC=ASSMB;HOMSEQ=AGAATTAGGAGCTGGG;MAPQ=60;MATEID=640176:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_93957501_93982501_64C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66
12	95839932	641035:1	G	G[12:95842549[	69	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=641035:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:95839932(+)-12:95842549(-)__12_95819501_95844501D;SPAN=2617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32
12	95842549	641035:2	A	]12:95839932]A	69	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=641035:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:95839932(+)-12:95842549(-)__12_95819501_95844501D;SPAN=2617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32
12	95946577	641078:1	C	C[12:95949177[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGACTGC;MAPQ=60;MATEID=641078:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_95942001_95967001_32C;SPAN=2600;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:39:70:66.2:109.1,0,66.2:39:0:-109.6:109.6
12	95949177	641078:2	A	]12:95946577]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGACTGC;MAPQ=60;MATEID=641078:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_95942001_95967001_32C;SPAN=2600;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:39:70:66.2:109.1,0,66.2:39:0:-109.6:109.6
12	97093816	641559:1	T	T[12:97094584[	13	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=641559:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_97093501_97118501_32C;SPAN=768;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:36:13.1:13.1,0,75.8:7:0:-12.99:15.64
12	97094584	641559:2	T	]12:97093816]T	13	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=641559:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_97093501_97118501_32C;SPAN=768;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:36:13.1:13.1,0,75.8:7:0:-12.99:15.64
12	97160963	641593:1	T	T[12:97161278[	99	PASS	EVDNC=ASSMB;HOMSEQ=GAGCTTGGTGTTTT;MAPQ=60;MATEID=641593:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_97142501_97167501_30C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:29:10.2:112.2,10.2,0:37:0:-112.2:112.2
12	97161278	641593:2	G	]12:97160963]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GAGCTTGGTGTTTT;MAPQ=60;MATEID=641593:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_97142501_97167501_30C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:29:10.2:112.2,10.2,0:37:0:-112.2:112.2
12	98569527	642178:1	T	T[12:99037303[	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=642178:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_99029001_99054001_31C;SPAN=467776;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69
12	99037303	642178:2	T	]12:98569527]T	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=642178:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_99029001_99054001_31C;SPAN=467776;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69
12	100282199	642588:1	A	A[12:100282483[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTGGCTAATTTTTGTA;MAPQ=60;MATEID=642588:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100278501_100303501_22C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:27:10.5:115.5,10.5,0:30:9:-115.5:115.5
12	100282483	642588:2	G	]12:100282199]G	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTGGCTAATTTTTGTA;MAPQ=60;MATEID=642588:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100278501_100303501_22C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:27:10.5:115.5,10.5,0:30:9:-115.5:115.5
12	100627443	642686:1	T	]12:100717132]T	26	PASS	DISC_MAPQ=49;EVDNC=ASDIS;INSERTION=GCAAAC;MAPQ=60;MATEID=642686:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100695001_100720001_30C;SPAN=89689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:7:4:-27.29:27.29
12	100717132	642686:2	G	G[12:100627443[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCAAAC;MAPQ=60;MATEID=642686:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100695001_100720001_30C;SPAN=89689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:7:4:-27.29:27.29
12	101708632	643044:1	G	G[12:101713309[	14	PASS	EVDNC=ASSMB;HOMSEQ=ACAG;MAPQ=60;MATEID=643044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_101699501_101724501_55C;SPAN=4677;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:31:14.6:14.6,0,60.8:7:0:-14.39:16.16
12	101713309	643044:2	A	]12:101708632]A	14	PASS	EVDNC=ASSMB;HOMSEQ=ACAG;MAPQ=60;MATEID=643044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_101699501_101724501_55C;SPAN=4677;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:31:14.6:14.6,0,60.8:7:0:-14.39:16.16
12	103965852	651667:1	G	[12:125316602[G	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=651667:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_125293001_125318001_45C;SPAN=21350750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:23:12.9:141.9,12.9,0:39:13:-141.9:141.9
12	103985728	643737:1	A	A[12:103986948[	26	PASS	DISC_MAPQ=15;EVDNC=ASDIS;MAPQ=60;MATEID=643737:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_103978001_104003001_17C;SPAN=1220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:45:26.9:26.9,0,86.3:9:3:-26.96:28.7
12	103986948	643737:2	T	]12:103985728]T	26	PASS	DISC_MAPQ=35;EVDNC=ASDIS;MAPQ=48;MATEID=643737:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_103978001_104003001_17C;SPAN=1220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:45:26.9:26.9,0,86.3:9:3:-26.96:28.7
12	103988861	643740:1	A	A]12:125316718]	75	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=643740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:103988861(+)-12:125316718(+)__12_103978001_104003001D;SPAN=21327857;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:29:1.5:75.9,1.5,0:0:25:-79.34:79.34
12	104125233	126956:2	T	]2:171438928]T	99	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCAGTC;MAPQ=60;MATEID=126956:1;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_2_171426501_171451501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:30:12.9:141.9,12.9,0:46:9:-141.9:141.9
12	104975278	644146:1	A	A[12:104979768[	92	PASS	EVDNC=ASSMB;HOMSEQ=TATA;MAPQ=60;MATEID=644146:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_104958001_104983001_9C;SPAN=4490;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42
12	104979768	644146:2	T	]12:104975278]T	92	PASS	EVDNC=ASSMB;HOMSEQ=TATA;MAPQ=60;MATEID=644146:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_104958001_104983001_9C;SPAN=4490;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42
12	107809482	420918:2	A	]7:111413698]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=420918:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_111401501_111426501_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92
12	107828783	644977:1	A	A[12:107829087[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAGCTGGTCCA;MAPQ=60;MATEID=644977:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_107824501_107849501_47C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:30:34.4:41,0,34.4:12:6:-41.11:41.11
12	107829087	644977:2	A	]12:107828783]A	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAGCTGGTCCA;MAPQ=60;MATEID=644977:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_107824501_107849501_47C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:30:34.4:41,0,34.4:12:6:-41.11:41.11
12	107971134	645049:1	T	[12:107972746[T	27	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TTCTG;MAPQ=0;MATEID=645049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_107971501_107996501_18C;SPAN=1612;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:9:6:-27.88:28.16
12	107972746	645049:2	C	[12:107971134[C	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTG;MAPQ=60;MATEID=645049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_107971501_107996501_18C;SPAN=1612;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:9:6:-27.88:28.16
12	107973569	645044:2	T	T[1:114957233[	19	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=645044:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_107971501_107996501_49C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
12	109661407	645728:1	A	]12:109661985]A	52	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=645728:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:109661407(-)-12:109661985(+)__12_109637501_109662501D;SPAN=578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:61:52.4:52.4,0,98.6:0:21:-52.17:53.04
12	109661985	645728:2	T	T[12:109661407[	52	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=645728:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:109661407(-)-12:109661985(+)__12_109637501_109662501D;SPAN=578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:61:52.4:52.4,0,98.6:0:21:-52.17:53.04
12	109868246	645814:1	A	[12:109912750[A	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTG;MAPQ=60;MATEID=645814:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_109858001_109883001_7C;SPAN=44504;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:11:5:-33.92:33.92
12	109912750	645814:2	C	[12:109868246[C	33	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGTG;MAPQ=60;MATEID=645814:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_109858001_109883001_7C;SPAN=44504;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:11:5:-33.92:33.92
12	110216250	645904:1	G	G[12:110216550[	9	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGG;MAPQ=60;MATEID=645904:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_110201001_110226001_19C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96
12	110216550	645904:2	C	]12:110216250]C	9	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGG;MAPQ=60;MATEID=645904:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_110201001_110226001_19C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96
12	110829790	632064:2	A	]12:65229310]A	17	PASS	EVDNC=ASSMB;INSERTION=AAG;MAPQ=60;MATEID=632064:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_65219001_65244001_43C;SPAN=45600480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56
12	114529434	647132:1	A	]12:114549384]A	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=647132:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_114537501_114562501_41C;SPAN=19950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:8:7:-35.24:35.24
12	114549384	647132:2	T	T[12:114529434[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=647132:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_114537501_114562501_41C;SPAN=19950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:8:7:-35.24:35.24
12	118295227	648631:2	G	G[12:69153592[	22	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=648631:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:69153592(-)-12:118295227(+)__12_118286001_118311001D;SPAN=49141635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
12	119585902	649147:1	A	A[12:119587086[	67	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCATGA;MAPQ=60;MATEID=649147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_119584501_119609501_35C;SPAN=1184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:29:5:67.7,0,5:15:15:-70.94:70.94
12	119587086	649147:2	G	]12:119585902]G	67	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCATGA;MAPQ=60;MATEID=649147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_119584501_119609501_35C;SPAN=1184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:29:5:67.7,0,5:15:15:-70.94:70.94
12	120852804	649669:1	A	]12:120852878]A	69	PASS	EVDNC=ASSMB;INSERTION=GATATATGAAATACATATTTCATATAATATATACATATG;MAPQ=60;MATEID=649669:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_12_120834001_120859001_57C;SPAN=74;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:57:69.8:69.8,0,73.1:26:0:-69.8:69.81
12	120852878	649669:2	T	T[12:120852804[	69	PASS	EVDNC=ASSMB;INSERTION=GATATATGAAATACATATTTCATATAATATATACATATG;MAPQ=60;MATEID=649669:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_12_120834001_120859001_57C;SPAN=74;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:57:69.8:69.8,0,73.1:26:0:-69.8:69.81
12	124438685	651290:1	A	]12:124439523]A	38	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=651290:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:124438685(-)-12:124439523(+)__12_124435501_124460501D;SPAN=838;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:39:38.6:38.6,0,58.4:0:15:-38.55:38.8
12	124439523	651290:2	G	G[12:124438685[	38	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=651290:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:124438685(-)-12:124439523(+)__12_124435501_124460501D;SPAN=838;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:39:38.6:38.6,0,58.4:0:15:-38.55:38.8
12	124849873	651462:1	G	G[12:124850162[	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGGAGTTCCAGACCAGCCTGG;MAPQ=60;MATEID=651462:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_124827501_124852501_120C;SPAN=289;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:26:2.6:62,0,2.6:14:11:-65.14:65.14
12	124850162	651462:2	C	]12:124849873]C	62	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGGAGTTCCAGACCAGCCTGG;MAPQ=60;MATEID=651462:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_124827501_124852501_120C;SPAN=289;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:26:2.6:62,0,2.6:14:11:-65.14:65.14
12	125114682	651626:1	C	C[12:125114918[	23	PASS	EVDNC=ASSMB;HOMSEQ=CACATGGTAAGGGCTTCCCC;MAPQ=60;MATEID=651626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_125097001_125122001_36C;SPAN=236;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
12	125114918	651626:2	C	]12:125114682]C	23	PASS	EVDNC=ASSMB;HOMSEQ=CACATGGTAAGGGCTTCCCC;MAPQ=60;MATEID=651626:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_125097001_125122001_36C;SPAN=236;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
12	125316601	619289:2	A	[12:25803192[A	52	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=619289:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:25803192(-)-12:125316601(-)__12_25798501_25823501D;SPAN=99513409;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	125316602	651667:2	C	[12:103965852[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=651667:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_125293001_125318001_45C;SPAN=21350750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:23:12.9:141.9,12.9,0:39:13:-141.9:141.9
12	125316718	643740:2	C	C]12:103988861]	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=643740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:103988861(+)-12:125316718(+)__12_103978001_104003001D;SPAN=21327857;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:29:1.5:75.9,1.5,0:0:25:-79.34:79.34
12	126832129	652191:2	C	[2:74561101[C	51	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCT;MAPQ=60;MATEID=652191:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_12_126812001_126837001_50C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:27:15.5:51.8,0,15.5:12:4:-52.86:52.86
12	127040067	652330:1	T	T[12:127040673[	47	PASS	EVDNC=ASSMB;HOMSEQ=CTAT;MAPQ=60;MATEID=652330:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127032501_127057501_17C;SPAN=606;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96
12	127040673	652330:2	C	]12:127040067]C	47	PASS	EVDNC=ASSMB;HOMSEQ=CTAT;MAPQ=60;MATEID=652330:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127032501_127057501_17C;SPAN=606;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96
12	127310968	652478:1	T	T[12:127311375[	9	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=652478:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127302001_127327001_104C;SPAN=407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96
12	127311375	652478:2	T	]12:127310968]T	9	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=652478:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127302001_127327001_104C;SPAN=407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96
12	127553449	652605:1	T	T[12:127553750[	45	PASS	EVDNC=ASSMB;HOMSEQ=CTGTTTCTTTTCTTCTT;MAPQ=60;MATEID=652605:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_127547001_127572001_127C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05
12	127553750	652605:2	C	]12:127553449]C	45	PASS	EVDNC=ASSMB;HOMSEQ=CTGTTTCTTTTCTTCTT;MAPQ=60;MATEID=652605:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_127547001_127572001_127C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05
12	129235285	653458:1	T	T[12:129235878[	19	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=653458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_129213001_129238001_115C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23
12	129235878	653458:2	A	]12:129235285]A	19	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=653458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_129213001_129238001_115C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23
12	129575758	653630:1	T	T[12:129576074[	92	PASS	EVDNC=ASSMB;HOMSEQ=CAGATAGATACATTTT;MAPQ=60;MATEID=653630:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_129556001_129581001_93C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:28:8.4:92.4,8.4,0:30:0:-92.42:92.42
12	129576074	653630:2	C	]12:129575758]C	92	PASS	EVDNC=ASSMB;HOMSEQ=CAGATAGATACATTTT;MAPQ=60;MATEID=653630:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_129556001_129581001_93C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:28:8.4:92.4,8.4,0:30:0:-92.42:92.42
12	130043305	653846:1	A	]12:130043472]A	22	PASS	EVDNC=ASSMB;HOMSEQ=ACACATGCACACAC;MAPQ=60;MATEID=653846:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_12_130021501_130046501_3C;SPAN=167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98
12	130043472	653846:2	C	C[12:130043305[	22	PASS	EVDNC=ASSMB;HOMSEQ=ACACATGCACACAC;MAPQ=60;MATEID=653846:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_12_130021501_130046501_3C;SPAN=167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98
12	131226570	654514:1	A	[12:131439049[A	18	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=654514:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131226570(-)-12:131439049(-)__12_131418001_131443001D;SPAN=212479;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
12	131268105	654494:1	G	G]12:131402665]	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=654494:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131268105(+)-12:131402665(+)__12_131393501_131418501D;SPAN=134560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
12	131402665	654494:2	A	A]12:131268105]	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=654494:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131268105(+)-12:131402665(+)__12_131393501_131418501D;SPAN=134560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
12	131432986	654517:1	T	]12:131433079]T	39	PASS	EVDNC=ASSMB;HOMSEQ=TCCTCTCCCCTGTGTCCCGGCATCCCCCGCAT;MAPQ=36;MATEID=654517:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_12_131418001_131443001_65C;SPAN=93;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
12	131433079	654517:2	T	T[12:131432986[	39	PASS	EVDNC=ASSMB;HOMSEQ=TCCTCTCCCCTGTGTCCCGGCATCCCCCGCAT;MAPQ=60;MATEID=654517:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_12_131418001_131443001_65C;SPAN=93;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
12	131439049	654514:2	C	[12:131226570[C	18	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=654514:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131226570(-)-12:131439049(-)__12_131418001_131443001D;SPAN=212479;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
12	131613513	654667:1	T	T]12:131633939]	49	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=654667:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131613513(+)-12:131633939(+)__12_131614001_131639001D;SPAN=20426;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
12	131614588	654668:1	C	[12:131633895[C	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=654668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_131614001_131639001_72C;SPAN=19307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:8:11:-52.81:52.81
12	131633895	654668:2	G	[12:131614588[G	52	PASS	DISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=C;MAPQ=43;MATEID=654668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_131614001_131639001_72C;SPAN=19307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:8:11:-52.81:52.81
12	131633939	654667:2	C	C]12:131613513]	49	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=654667:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131613513(+)-12:131633939(+)__12_131614001_131639001D;SPAN=20426;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
12	131779209	654749:1	G	]12:131779312]G	28	PASS	EVDNC=ASSMB;HOMSEQ=GTGTGTGAAGAGGGCGGCGC;MAPQ=25;MATEID=654749:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_12_131761001_131786001_4C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
12	131779312	654749:2	C	C[12:131779209[	28	PASS	EVDNC=ASSMB;HOMSEQ=GTGTGTGAAGAGGGCGGCGC;MAPQ=60;MATEID=654749:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_12_131761001_131786001_4C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
12	132397258	654980:1	G	]12:132397846]G	22	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=GCCCTCCCCGGGGCCCCTCCTGGGCTTTCACCTGCGTCTCTGGG;MAPQ=60;MATEID=654980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132373501_132398501_39C;SPAN=588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:4:7:-22.12:22.58
12	132397846	654980:2	G	G[12:132397258[	22	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GCCCTCCCCGGGGCCCCTCCTGGGCTTTCACCTGCGTCTCTGGG;MAPQ=60;MATEID=654980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132373501_132398501_39C;SPAN=588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:4:7:-22.12:22.58
12	132411313	654995:1	C	]12:132411391]C	28	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ACACGGGCACCCACACACACACA;INSERTION=CAACACAGGCCCACACGCACCCGTGCACACACAGGCCTCCCACACACACACAGGCACT;MAPQ=60;MATEID=654995:2;MATENM=5;NM=2;NUMPARTS=3;SCTG=c_12_132398001_132423001_44C;SPAN=78;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
12	132411391	654995:2	A	A[12:132411313[	28	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ACACGGGCACCCACACACACACA;INSERTION=CAACACAGGCCCACACGCACCCGTGCACACACAGGCCTCCCACACACACACAGGCACT;MAPQ=60;MATEID=654995:1;MATENM=2;NM=5;NUMPARTS=3;SCTG=c_12_132398001_132423001_44C;SPAN=78;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
12	132473094	655080:1	T	T[12:132474099[	33	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=655080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:132473094(+)-12:132474099(-)__12_132471501_132496501D;SPAN=1005;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:0:11:-34.67:34.67
12	132474099	655080:2	T	]12:132473094]T	33	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=655080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:132473094(+)-12:132474099(-)__12_132471501_132496501D;SPAN=1005;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:0:11:-34.67:34.67
12	132474348	655090:1	C	]12:132542292]C	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=655090:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132520501_132545501_33C;SPAN=67944;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:7:8:-25.7:25.87
12	132542292	655090:2	C	C[12:132474348[	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=655090:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132520501_132545501_33C;SPAN=67944;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:7:8:-25.7:25.87
12	132742761	655207:2	C	]1:6937887]C	20	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=655207:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:6937887(+)-12:132742761(-)__12_132741001_132766001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36
13	16000705	655427:1	A	A[13:16006260[	42	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=655427:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16000705(+)-13:16006260(-)__13_15998501_16023501D;SPAN=5555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	16001321	655429:1	G	]13:16018130]G	0	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=655429:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001321(-)-13:16018130(+)__13_15998501_16023501D;SPAN=16809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:276:24.4:0,24.4,742.6:0:16:24.77:26.82
13	16001617	655434:1	C	C[13:16012944[	7	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=655434:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001617(+)-13:16012944(-)__13_15998501_16023501D;SPAN=11327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:91:7.7:7.7,0,218.9:0:10:-7.431:19.65
13	16002842	655447:1	T	]13:16014050]T	4	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=655447:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16002842(-)-13:16014050(+)__13_15998501_16023501D;SPAN=11208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:102:4.4:4.4,0,251.9:0:10:-4.339:19.13
13	16005128	655459:1	T	T[13:16016361[	47	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655459:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16005128(+)-13:16016361(-)__13_15998501_16023501D;SPAN=11233;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:88:47.9:47.9,0,173.3:0:22:-47.89:51.9
13	16006260	655427:2	G	]13:16000705]G	42	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655427:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16000705(+)-13:16006260(-)__13_15998501_16023501D;SPAN=5555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	16009131	655481:1	G	G[13:16020430[	41	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655481:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16009131(+)-13:16020430(-)__13_15998501_16023501D;SPAN=11299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:42:41:41,0,64.1:0:16:-41.01:41.3
13	16010771	655489:1	A	A[13:16016355[	1	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=655489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16010771(+)-13:16016355(-)__13_15998501_16023501D;SPAN=5584;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:102:1.1:1.1,0,255.2:0:9:-1.038:16.79
13	16011227	655498:1	A	]13:16022545]A	0	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655498:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011227(-)-13:16022545(+)__13_15998501_16023501D;SPAN=11318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:195:1.9:0,1.9,495.1:0:16:1.997:29.32
13	16011579	655500:1	C	C[13:16017146[	0	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655500:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011579(+)-13:16017146(-)__13_15998501_16023501D;SPAN=5567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:221:19:0,19,594.1:0:13:19.21:21.88
13	16012944	655434:2	C	]13:16001617]C	7	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=655434:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001617(+)-13:16012944(-)__13_15998501_16023501D;SPAN=11327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:91:7.7:7.7,0,218.9:0:10:-7.431:19.65
13	16013417	892860:1	G	[21:7969771[G	20	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=892860:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013417(-)-21:7969771(-)__21_7962501_7987501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36
13	16013930	655511:1	G	]13:16019632]G	51	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=655511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013930(-)-13:16019632(+)__13_15998501_16023501D;SPAN=5702;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:41:51.2:51.2,0,51.2:0:19:-51.19:51.2
13	16014050	655447:2	T	T[13:16002842[	4	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=655447:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16002842(-)-13:16014050(+)__13_15998501_16023501D;SPAN=11208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:102:4.4:4.4,0,251.9:0:10:-4.339:19.13
13	16014991	655523:1	A	]13:16020652]A	55	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=655523:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16014991(-)-13:16020652(+)__13_15998501_16023501D;SPAN=5661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:85:55.4:55.4,0,157.7:0:24:-55.33:58.11
13	16016339	655526:1	G	]13:16022071]G	98	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=655526:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016339(-)-13:16022071(+)__13_15998501_16023501D;SPAN=5732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:73:85.1:98.3,0,85.1:0:36:-98.36:98.36
13	16016355	655489:2	G	]13:16010771]G	1	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=655489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16010771(+)-13:16016355(-)__13_15998501_16023501D;SPAN=5584;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:102:1.1:1.1,0,255.2:0:9:-1.038:16.79
13	16016361	655459:2	T	]13:16005128]T	47	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=655459:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16005128(+)-13:16016361(-)__13_15998501_16023501D;SPAN=11233;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:88:47.9:47.9,0,173.3:0:22:-47.89:51.9
13	16016553	896677:1	G	]21:10789057]G	82	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GAAGCATTCTGAGAAACTTCTTT;MAPQ=60;MATEID=896677:2;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_21_10780001_10805001_326C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:95:82.4:82.4,0,155:11:22:-82.23:83.51
13	16016588	655540:1	T	T[13:16022261[	36	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655540:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016588(+)-13:16022261(-)__13_15998501_16023501D;SPAN=5673;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:116:36.8:36.8,0,254.6:0:21:-36.71:46.2
13	16017146	655500:2	C	]13:16011579]C	0	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655500:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011579(+)-13:16017146(-)__13_15998501_16023501D;SPAN=5567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:221:19:0,19,594.1:0:13:19.21:21.88
13	16018130	655429:2	G	G[13:16001321[	0	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=655429:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001321(-)-13:16018130(+)__13_15998501_16023501D;SPAN=16809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:276:24.4:0,24.4,742.6:0:16:24.77:26.82
13	16019632	655511:2	A	A[13:16013930[	51	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=655511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013930(-)-13:16019632(+)__13_15998501_16023501D;SPAN=5702;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:41:51.2:51.2,0,51.2:0:19:-51.19:51.2
13	16020430	655481:2	G	]13:16009131]G	41	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=655481:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16009131(+)-13:16020430(-)__13_15998501_16023501D;SPAN=11299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:42:41:41,0,64.1:0:16:-41.01:41.3
13	16020652	655523:2	G	G[13:16014991[	55	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=655523:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16014991(-)-13:16020652(+)__13_15998501_16023501D;SPAN=5661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:85:55.4:55.4,0,157.7:0:24:-55.33:58.11
13	16022071	655526:2	G	G[13:16016339[	98	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655526:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016339(-)-13:16022071(+)__13_15998501_16023501D;SPAN=5732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:73:85.1:98.3,0,85.1:0:36:-98.36:98.36
13	16022261	655540:2	A	]13:16016588]A	36	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=655540:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016588(+)-13:16022261(-)__13_15998501_16023501D;SPAN=5673;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:116:36.8:36.8,0,254.6:0:21:-36.71:46.2
13	16022545	655498:2	N	N[13:16011227[	0	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=655498:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011227(-)-13:16022545(+)__13_15998501_16023501D;SPAN=11318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:195:1.9:0,1.9,495.1:0:16:1.997:29.32
13	16031321	655617:1	A	]13:16057058]A	39	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=655617:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16031321(-)-13:16057058(+)__13_16047501_16072501D;SPAN=25737;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:0:13:-39.61:39.61
13	16057058	655617:2	T	T[13:16031321[	39	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=655617:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16031321(-)-13:16057058(+)__13_16047501_16072501D;SPAN=25737;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:0:13:-39.61:39.61
13	16125492	656014:1	C	]13:16163215]C	43	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=656014:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16125492(-)-13:16163215(+)__13_16145501_16170501D;SPAN=37723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:0:16:-43.26:43.26
13	16127862	655887:1	A	]13:16145009]A	0	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16127862(-)-13:16145009(+)__13_16121001_16146001D;SPAN=17147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:317:59.3:0,59.3,917.6:0:9:59.4:12.27
13	16145009	655887:2	T	T[13:16127862[	0	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=655887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16127862(-)-13:16145009(+)__13_16121001_16146001D;SPAN=17147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:317:59.3:0,59.3,917.6:0:9:59.4:12.27
13	16163215	656014:2	T	T[13:16125492[	43	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=656014:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16125492(-)-13:16163215(+)__13_16145501_16170501D;SPAN=37723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:0:16:-43.26:43.26
13	16166518	656143:1	C	]13:16177110]C	26	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=656143:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16166518(-)-13:16177110(+)__13_16145501_16170501D;SPAN=10592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	16176791	656569:1	C	]13:16177450]C	18	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=656569:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16176791(-)-13:16177450(+)__13_16170001_16195001D;SPAN=659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76
13	16177110	656143:2	G	G[13:16166518[	26	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=656143:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16166518(-)-13:16177110(+)__13_16145501_16170501D;SPAN=10592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	16177450	656569:2	G	G[13:16176791[	18	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=656569:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16176791(-)-13:16177450(+)__13_16170001_16195001D;SPAN=659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76
13	16182447	656725:1	A	]13:16182808]A	65	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=ATAAAAACTAGACAGAAGA;MAPQ=14;MATEID=656725:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_16170001_16195001_257C;SPAN=361;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:61:65.6:65.6,0,85.4:23:3:-65.38:65.57
13	16182808	656725:2	A	A[13:16182447[	65	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=ATAAAAACTAGACAGAAGA;MAPQ=60;MATEID=656725:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_16170001_16195001_257C;SPAN=361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:61:65.6:65.6,0,85.4:23:3:-65.38:65.57
13	16256480	658420:1	G	]13:16259419]G	72	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=658420:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16256480(-)-13:16259419(+)__13_16243501_16268501D;SPAN=2939;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:20:6.6:72.6,6.6,0:0:24:-72.62:72.62
13	16259044	658453:1	A	[20:28781252[A	92	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=TCAGAATGCTTCTGTGTAGTTTTTTTGTGAAGATATTT;MAPQ=38;MATEID=658453:2;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_13_16243501_16268501_360C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:10:8.4:92.4,8.4,0:21:9:-92.42:92.42
13	16259419	658420:2	N	N[13:16256480[	72	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658420:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16256480(-)-13:16259419(+)__13_16243501_16268501D;SPAN=2939;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:20:6.6:72.6,6.6,0:0:24:-72.62:72.62
13	16271398	658578:1	A	A[13:16274326[	2	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=658578:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271398(+)-13:16274326(-)__13_16268001_16293001D;SPAN=2928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:87:2:2,0,216.5:0:8:-1.953:15.07
13	16271442	658579:1	A	A[13:16277305[	69	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=658579:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271442(+)-13:16277305(-)__13_16268001_16293001D;SPAN=5863;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:0:21:-68.32:68.32
13	16271831	658587:1	C	C[13:16274694[	17	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=658587:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271831(+)-13:16274694(-)__13_16268001_16293001D;SPAN=2863;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:44:17.3:17.3,0,93.2:0:9:-17.34:20.33
13	16274326	658578:2	A	]13:16271398]A	2	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=658578:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271398(+)-13:16274326(-)__13_16268001_16293001D;SPAN=2928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:87:2:2,0,216.5:0:8:-1.953:15.07
13	16274694	658587:2	G	]13:16271831]G	17	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=658587:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271831(+)-13:16274694(-)__13_16268001_16293001D;SPAN=2863;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:44:17.3:17.3,0,93.2:0:9:-17.34:20.33
13	16277305	658579:2	T	]13:16271442]T	69	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=658579:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271442(+)-13:16277305(-)__13_16268001_16293001D;SPAN=5863;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:0:21:-68.32:68.32
13	16279161	658601:1	C	]13:16280739]C	42	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=658601:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16279161(-)-13:16280739(+)__13_16268001_16293001D;SPAN=1578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	16280739	658601:2	G	G[13:16279161[	42	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658601:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16279161(-)-13:16280739(+)__13_16268001_16293001D;SPAN=1578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	16293214	658722:1	T	]13:16345186]T	46	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=658722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293214(-)-13:16345186(+)__13_16341501_16366501D;SPAN=51972;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:0:15:-46.21:46.21
13	16293475	659043:1	T	T[13:16624297[	23	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=659043:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293475(+)-13:16624297(-)__13_16611001_16636001D;SPAN=330822;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84
13	16298838	658649:1	T	T[13:16678833[	33	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658649:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16298838(+)-13:16678833(-)__13_16292501_16317501D;SPAN=379995;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:0:12:-33.55:33.55
13	16326610	659640:1	G	]13:17149141]G	58	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=659640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326610(-)-13:17149141(+)__13_17125501_17150501D;SPAN=822531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:39:38.6:58.4,0,38.6:0:21:-58.54:58.54
13	16326671	659080:1	A	]13:16653519]A	18	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=659080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326671(-)-13:16653519(+)__13_16635501_16660501D;SPAN=326848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
13	16326907	658726:1	T	T[13:16358236[	52	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=658726:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326907(+)-13:16358236(-)__13_16341501_16366501D;SPAN=31329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:24:6.5:52.7,0,6.5:0:18:-54.59:54.59
13	16344756	658734:1	A	]13:16358491]A	89	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=658734:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16344756(-)-13:16358491(+)__13_16341501_16366501D;SPAN=13735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:21:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	16345186	658722:2	C	C[13:16293214[	46	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=658722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293214(-)-13:16345186(+)__13_16341501_16366501D;SPAN=51972;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:0:15:-46.21:46.21
13	16345189	659048:1	T	T[13:16624249[	75	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=659048:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16345189(+)-13:16624249(-)__13_16611001_16636001D;SPAN=279060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92
13	16358236	658726:2	A	]13:16326907]A	52	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=658726:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326907(+)-13:16358236(-)__13_16341501_16366501D;SPAN=31329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:24:6.5:52.7,0,6.5:0:18:-54.59:54.59
13	16358491	658734:2	T	T[13:16344756[	89	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=658734:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16344756(-)-13:16358491(+)__13_16341501_16366501D;SPAN=13735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:21:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	16385294	659116:1	G	]13:16679290]G	26	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659116:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16385294(-)-13:16679290(+)__13_16660001_16685001D;SPAN=293996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:1:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	16426078	659443:1	G	G[13:16940860[	0	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=659443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16426078(+)-13:16940860(-)__13_16929501_16954501D;SPAN=514782;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:95:0:0,0,237.6:0:8:0.2957:14.75
13	16427155	659118:1	G	G[13:16678845[	25	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=659118:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16427155(+)-13:16678845(-)__13_16660001_16685001D;SPAN=251690;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
13	16507002	658964:1	T	T[13:17299846[	29	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=658964:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16507002(+)-13:17299846(-)__13_16488501_16513501D;SPAN=792844;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:47:29.9:29.9,0,86:0:13:-29.7:31.34
13	16526723	658974:1	A	]13:17086687]A	99	PASS	DISC_MAPQ=44;EVDNC=ASDIS;HOMSEQ=AAAAGCAAATATCTTCCCATAAACACTAGACAGAAACATTCTCAGAAACTTCTTTATGA;MAPQ=60;MATEID=658974:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_13_16513001_16538001_654C;SPAN=559964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:29:14.7:161.7,14.7,0:32:23:-161.7:161.7
13	16526965	658976:1	A	A[13:17146679[	44	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=658976:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526965(+)-13:17146679(-)__13_16513001_16538001D;SPAN=619714;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:43:44:44,0,63.8:0:17:-44.03:44.24
13	16526973	658977:1	A	A[13:16603430[	14	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=658977:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526973(+)-13:16603430(-)__13_16513001_16538001D;SPAN=76457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
13	16527034	658978:1	G	G[13:16906930[	46	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=658978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16527034(+)-13:16906930(-)__13_16513001_16538001D;SPAN=379896;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:0:16:-46.21:46.21
13	16551507	658998:1	C	C[13:16871236[	82	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=TTGGAAACGGGAATATCTTCATATCAAATCTAGACAGAAGCATTCTCAGAAAC;MAPQ=14;MATEID=658998:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_13_16537501_16562501_35C;SPAN=319729;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:12:7.5:82.5,7.5,0:26:2:-82.52:82.52
13	16603430	658977:2	A	]13:16526973]A	14	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=658977:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526973(+)-13:16603430(-)__13_16513001_16538001D;SPAN=76457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
13	16618050	659056:1	A	A[13:16631536[	6	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=659056:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16618050(+)-13:16631536(-)__13_16611001_16636001D;SPAN=13486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:83:6.5:6.5,0,201.2:0:9:-6.378:17.63
13	16624236	659222:1	T	]13:16726447]T	47	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=659222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624236(-)-13:16726447(+)__13_16709001_16734001D;SPAN=102211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75
13	16624249	659048:2	T	]13:16345189]T	75	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=659048:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16345189(+)-13:16624249(-)__13_16611001_16636001D;SPAN=279060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92
13	16624297	659043:2	T	]13:16293475]T	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=659043:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293475(+)-13:16624297(-)__13_16611001_16636001D;SPAN=330822;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84
13	16624499	659339:1	T	T[13:16857426[	0	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=659339:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624499(+)-13:16857426(-)__13_16856001_16881001D;SPAN=232927;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:104:2.7:0,2.7,267.3:0:8:2.826:14.43
13	16624711	659065:1	C	C[13:17396031[	28	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=659065:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624711(+)-13:17396031(-)__13_16611001_16636001D;SPAN=771320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
13	16631536	659056:2	C	]13:16618050]C	6	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=659056:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16618050(+)-13:16631536(-)__13_16611001_16636001D;SPAN=13486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:83:6.5:6.5,0,201.2:0:9:-6.378:17.63
13	16653519	659080:2	A	A[13:16326671[	18	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=659080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326671(-)-13:16653519(+)__13_16635501_16660501D;SPAN=326848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
13	16656410	659717:1	A	A[13:17209367[	18	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=659717:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16656410(+)-13:17209367(-)__13_17199001_17224001D;SPAN=552957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:63:18.8:18.8,0,137.6:0:11:-18.6:24.01
13	16665301	659226:1	T	T[13:16710945[	56	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AGCATCCTCAGAAACTTCTTTGTGATGTGTGCATTCAAGTCACAGAGTTGAACATT;MAPQ=60;MATEID=659226:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_16709001_16734001_661C;SPAN=45644;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:16:8:-56.11:56.11
13	16678833	658649:2	T	]13:16298838]T	33	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=658649:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16298838(+)-13:16678833(-)__13_16292501_16317501D;SPAN=379995;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:0:12:-33.55:33.55
13	16678845	659118:2	T	]13:16427155]T	25	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=659118:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16427155(+)-13:16678845(-)__13_16660001_16685001D;SPAN=251690;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
13	16679290	659116:2	G	G[13:16385294[	26	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=659116:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16385294(-)-13:16679290(+)__13_16660001_16685001D;SPAN=293996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:1:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	16697718	659900:1	A	A[13:17361102[	89	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=659900:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697718(+)-13:17361102(-)__13_17346001_17371001D;SPAN=663384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:5:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	16697740	659651:1	A	A[13:17148635[	16	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=659651:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697740(+)-13:17148635(-)__13_17125501_17150501D;SPAN=450895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51
13	16710945	659226:2	A	]13:16665301]A	56	PASS	DISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=AGCATCCTCAGAAACTTCTTTGTGATGTGTGCATTCAAGTCACAGAGTTGAACATT;MAPQ=60;MATEID=659226:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_16709001_16734001_661C;SPAN=45644;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:16:8:-56.11:56.11
13	16726447	659222:2	T	T[13:16624236[	47	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=659222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624236(-)-13:16726447(+)__13_16709001_16734001D;SPAN=102211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75
13	16825242	659506:1	A	A[13:17018409[	31	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659506:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16825242(+)-13:17018409(-)__13_17003001_17028001D;SPAN=193167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78
13	16844805	659821:1	A	]13:17287651]A	46	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=659821:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16844805(-)-13:17287651(+)__13_17272501_17297501D;SPAN=442846;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21
13	16845061	659349:1	A	A[13:16857396[	28	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659349:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16845061(+)-13:16857396(-)__13_16856001_16881001D;SPAN=12335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:100:28.1:28.1,0,222.8:0:17:-28.01:36.89
13	16857396	659349:2	A	]13:16845061]A	28	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=659349:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16845061(+)-13:16857396(-)__13_16856001_16881001D;SPAN=12335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:100:28.1:28.1,0,222.8:0:17:-28.01:36.89
13	16857426	659339:2	A	]13:16624499]A	0	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=659339:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624499(+)-13:16857426(-)__13_16856001_16881001D;SPAN=232927;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:104:2.7:0,2.7,267.3:0:8:2.826:14.43
13	16871236	658998:2	T	]13:16551507]T	82	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=TTGGAAACGGGAATATCTTCATATCAAATCTAGACAGAAGCATTCTCAGAAAC;MAPQ=48;MATEID=658998:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_13_16537501_16562501_35C;SPAN=319729;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:12:7.5:82.5,7.5,0:26:2:-82.52:82.52
13	16871482	659378:1	G	G[13:16894583[	56	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=659378:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16871482(+)-13:16894583(-)__13_16880501_16905501D;SPAN=23101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:0:19:-56.11:56.11
13	16894583	659378:2	C	]13:16871482]C	56	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=659378:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16871482(+)-13:16894583(-)__13_16880501_16905501D;SPAN=23101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:0:19:-56.11:56.11
13	16906905	659652:1	T	]13:17146944]T	66	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=659652:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16906905(-)-13:17146944(+)__13_17125501_17150501D;SPAN=240039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:1:6:66,6,0:0:22:-66.02:66.02
13	16906930	658978:2	G	]13:16527034]G	46	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=658978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16527034(+)-13:16906930(-)__13_16513001_16538001D;SPAN=379896;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:0:16:-46.21:46.21
13	16911984	659530:1	T	]13:17039999]T	71	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=659530:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16911984(-)-13:17039999(+)__13_17027501_17052501D;SPAN=128015;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:51:55.1:71.6,0,55.1:0:26:-71.58:71.58
13	16940860	659443:2	A	]13:16426078]A	0	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16426078(+)-13:16940860(-)__13_16929501_16954501D;SPAN=514782;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:95:0:0,0,237.6:0:8:0.2957:14.75
13	17018409	659506:2	G	]13:16825242]G	31	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=659506:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16825242(+)-13:17018409(-)__13_17003001_17028001D;SPAN=193167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78
13	17039999	659530:2	T	T[13:16911984[	71	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=659530:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16911984(-)-13:17039999(+)__13_17027501_17052501D;SPAN=128015;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:51:55.1:71.6,0,55.1:0:26:-71.58:71.58
13	17086687	658974:2	A	A[13:16526723[	99	PASS	DISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=AAAAGCAAATATCTTCCCATAAACACTAGACAGAAACATTCTCAGAAACTTCTTTATGA;MAPQ=60;MATEID=658974:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_13_16513001_16538001_654C;SPAN=559964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:29:14.7:161.7,14.7,0:32:23:-161.7:161.7
13	17146679	658976:2	C	]13:16526965]C	44	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=658976:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526965(+)-13:17146679(-)__13_16513001_16538001D;SPAN=619714;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:43:44:44,0,63.8:0:17:-44.03:44.24
13	17146944	659652:2	G	G[13:16906905[	66	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=659652:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16906905(-)-13:17146944(+)__13_17125501_17150501D;SPAN=240039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:1:6:66,6,0:0:22:-66.02:66.02
13	17148635	659651:2	G	]13:16697740]G	16	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=659651:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697740(+)-13:17148635(-)__13_17125501_17150501D;SPAN=450895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51
13	17149141	659640:2	T	T[13:16326610[	58	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=659640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326610(-)-13:17149141(+)__13_17125501_17150501D;SPAN=822531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:39:38.6:58.4,0,38.6:0:21:-58.54:58.54
13	17209367	659717:2	T	]13:16656410]T	18	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=659717:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16656410(+)-13:17209367(-)__13_17199001_17224001D;SPAN=552957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:63:18.8:18.8,0,137.6:0:11:-18.6:24.01
13	17268150	659806:1	T	]13:17268348]T	99	PASS	EVDNC=ASSMB;INSERTION=AAAAATCTTCCCCTACAACG;MAPQ=60;MATEID=659806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_17248001_17273001_239C;SPAN=198;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:45:89:99:123.5,0,100.4:45:0:-123.7:123.7
13	17268348	659806:2	T	T[13:17268150[	99	PASS	EVDNC=ASSMB;INSERTION=AAAAATCTTCCCCTACAACG;MAPQ=60;MATEID=659806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_17248001_17273001_239C;SPAN=198;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:45:89:99:123.5,0,100.4:45:0:-123.7:123.7
13	17287315	659890:1	T	]13:17328244]T	29	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=659890:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17287315(-)-13:17328244(+)__13_17321501_17346501D;SPAN=40929;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
13	17287651	659821:2	T	T[13:16844805[	46	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=659821:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16844805(-)-13:17287651(+)__13_17272501_17297501D;SPAN=442846;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21
13	17299846	658964:2	A	]13:16507002]A	29	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=658964:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16507002(+)-13:17299846(-)__13_16488501_16513501D;SPAN=792844;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:47:29.9:29.9,0,86:0:13:-29.7:31.34
13	17328012	659892:1	C	]13:17396311]C	38	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659892:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17328012(-)-13:17396311(+)__13_17321501_17346501D;SPAN=68299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:0:14:-38.37:38.37
13	17328244	659890:2	A	A[13:17287315[	29	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=659890:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17287315(-)-13:17328244(+)__13_17321501_17346501D;SPAN=40929;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
13	17361102	659900:2	G	]13:16697718]G	89	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=659900:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697718(+)-13:17361102(-)__13_17346001_17371001D;SPAN=663384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:5:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	17396031	659065:2	T	]13:16624711]T	28	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=659065:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624711(+)-13:17396031(-)__13_16611001_16636001D;SPAN=771320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
13	17396311	659892:2	A	A[13:17328012[	38	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659892:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17328012(-)-13:17396311(+)__13_17321501_17346501D;SPAN=68299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:0:14:-38.37:38.37
13	17431936	660321:1	C	C[13:18028973[	18	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=660321:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17431936(+)-13:18028973(-)__13_18007501_18032501D;SPAN=597037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39
13	17553570	660051:1	G	G[13:17574225[	29	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=660051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17553570(+)-13:17574225(-)__13_17566501_17591501D;SPAN=20655;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71
13	17574225	660051:2	C	]13:17553570]C	29	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=660051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17553570(+)-13:17574225(-)__13_17566501_17591501D;SPAN=20655;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71
13	17711258	660261:1	T	T[13:17926844[	39	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=660261:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17711258(+)-13:17926844(-)__13_17909501_17934501D;SPAN=215586;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77
13	17926844	660261:2	A	]13:17711258]A	39	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=660261:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17711258(+)-13:17926844(-)__13_17909501_17934501D;SPAN=215586;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77
13	18028973	660321:2	A	]13:17431936]A	18	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=660321:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17431936(+)-13:18028973(-)__13_18007501_18032501D;SPAN=597037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39
13	18652931	822300:1	T	T]18:14406760]	20	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=822300:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:18652931(+)-18:14406760(+)__18_14406001_14431001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
13	18902672	660713:1	T	T[13:18902959[	79	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TACAGTCAACTCTTTT;MAPQ=55;MATEID=660713:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_18889501_18914501_14C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:9:7.2:79.2,7.2,0:23:5:-79.22:79.22
13	18902959	660713:2	T	]13:18902672]T	79	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TACAGTCAACTCTTTT;MAPQ=60;MATEID=660713:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_18889501_18914501_14C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:9:7.2:79.2,7.2,0:23:5:-79.22:79.22
13	19203230	661023:1	C	]13:19704496]C	17	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=661023:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19203230(-)-13:19704496(+)__13_19698001_19723001D;SPAN=501266;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87
13	19344209	660883:1	A	A]13:24542512]	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=660883:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19344209(+)-13:24542512(+)__13_19330501_19355501D;SPAN=5198303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
13	19348511	662933:1	A	[13:24537297[A	23	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=662933:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19348511(-)-13:24537297(-)__13_24524501_24549501D;SPAN=5188786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
13	19387612	662903:1	G	[13:24442077[G	26	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=662903:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19387612(-)-13:24442077(-)__13_24426501_24451501D;SPAN=5054465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
13	19549586	661710:1	C	C]13:21274569]	26	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=661710:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19549586(+)-13:21274569(+)__13_21266001_21291001D;SPAN=1724983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
13	19558512	660987:1	T	]13:19570101]T	17	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=660987:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19558512(-)-13:19570101(+)__13_19551001_19576001D;SPAN=11589;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
13	19570101	660987:2	T	T[13:19558512[	17	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=660987:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19558512(-)-13:19570101(+)__13_19551001_19576001D;SPAN=11589;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
13	19704496	661023:2	G	G[13:19203230[	17	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=661023:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19203230(-)-13:19704496(+)__13_19698001_19723001D;SPAN=501266;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87
13	19716043	661448:1	T	]13:20738863]T	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=661448:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_20727001_20752001_21C;SPAN=1022820;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:9:11:-39.01:39.01
13	19768374	661073:1	G	]13:19818698]G	30	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=661073:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_19796001_19821001_35C;SPAN=50324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
13	19818698	661073:2	T	T[13:19768374[	30	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=661073:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_19796001_19821001_35C;SPAN=50324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
13	20738863	661448:2	T	T[13:19716043[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=661448:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_20727001_20752001_21C;SPAN=1022820;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:9:11:-39.01:39.01
13	21274569	661710:2	G	G]13:19549586]	26	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=661710:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19549586(+)-13:21274569(+)__13_21266001_21291001D;SPAN=1724983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
13	21325323	661748:2	T	T]6:5853533]	69	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=661748:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5853533(+)-13:21325323(+)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:6:6.3:69.3,6.3,0:0:23:-69.32:69.32
13	21325351	661746:2	G	[6:5852479[G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=661746:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5852479(-)-13:21325351(-)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	22777302	662416:1	A	]13:23163697]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=662416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_23152501_23177501_7C;SPAN=386395;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39
13	23163697	662416:2	C	C[13:22777302[	39	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=662416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_23152501_23177501_7C;SPAN=386395;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39
13	23871309	662730:1	T	]13:24067044]T	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=662730:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_13_24059001_24084001_3C;SPAN=195735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:8:7:-27.73:27.73
13	24067044	662730:2	T	T[13:23871309[	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=662730:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_13_24059001_24084001_3C;SPAN=195735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:8:7:-27.73:27.73
13	24442077	662903:2	G	[13:19387612[G	26	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=662903:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19387612(-)-13:24442077(-)__13_24426501_24451501D;SPAN=5054465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
13	24537297	662933:2	T	[13:19348511[T	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=662933:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19348511(-)-13:24537297(-)__13_24524501_24549501D;SPAN=5188786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
13	24542512	660883:2	A	A]13:19344209]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=660883:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19344209(+)-13:24542512(+)__13_19330501_19355501D;SPAN=5198303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
13	26476016	663577:1	A	A[13:26478049[	89	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=663577:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26476016(+)-13:26478049(-)__13_26460001_26485001D;SPAN=2033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	26478049	663577:2	T	]13:26476016]T	89	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=663577:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26476016(+)-13:26478049(-)__13_26460001_26485001D;SPAN=2033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	26833724	663675:1	A	]13:26839046]A	26	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=663675:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_26827501_26852501_14C;SPAN=5322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:36:26.3:26.3,0,62.6:11:0:-26.19:27.08
13	26839046	663675:2	A	A[13:26833724[	26	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=663675:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_26827501_26852501_14C;SPAN=5322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:36:26.3:26.3,0,62.6:11:0:-26.19:27.08
13	26972727	663697:1	C	]13:26973623]C	31	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=663697:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26972727(-)-13:26973623(+)__13_26950001_26975001D;SPAN=896;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:0:13:-31.39:32.26
13	26973623	663697:2	A	A[13:26972727[	31	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=663697:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26972727(-)-13:26973623(+)__13_26950001_26975001D;SPAN=896;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:0:13:-31.39:32.26
13	29641700	664459:1	T	T[13:29647708[	46	PASS	EVDNC=ASSMB;HOMSEQ=GAGAACTACTTTTT;MAPQ=60;MATEID=664459:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_13_29645001_29670001_11C;SPAN=6008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
13	29647708	664459:2	G	]13:29641700]G	46	PASS	EVDNC=ASSMB;HOMSEQ=GAGAACTACTTTTT;MAPQ=60;MATEID=664459:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_13_29645001_29670001_11C;SPAN=6008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
13	30844083	664798:1	T	T[13:30844345[	79	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=GTGTGTGT;MAPQ=60;MATEID=664798:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_30821001_30846001_30C;SPAN=262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:17:7.2:79.2,7.2,0:17:9:-79.22:79.22
13	30844345	664798:2	G	]13:30844083]G	79	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=GTGTGTGT;MAPQ=60;MATEID=664798:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_30821001_30846001_30C;SPAN=262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:17:7.2:79.2,7.2,0:17:9:-79.22:79.22
13	35861692	665952:1	C	]13:35861791]C	44	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=665952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_35843501_35868501_5C;SPAN=99;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
13	35861791	665952:2	C	C[13:35861692[	44	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=665952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_35843501_35868501_5C;SPAN=99;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
13	35957937	665978:1	T	]13:35958395]T	12	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=665978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:35957937(-)-13:35958395(+)__13_35941501_35966501D;SPAN=458;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2
13	35958132	665982:1	C	]13:35958285]C	77	PASS	EVDNC=ASSMB;HOMSEQ=C;INSERTION=GTAACCATCACCACCATCACC;MAPQ=60;MATEID=665982:2;MATENM=3;NM=2;NUMPARTS=3;SCTG=c_13_35941501_35966501_17C;SECONDARY;SPAN=153;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:111:77.9:77.9,0,200:33:0:-77.73:80.78
13	35958285	665982:2	C	C[13:35958132[	77	PASS	EVDNC=ASSMB;HOMSEQ=C;INSERTION=GTAACCATCACCACCATCACC;MAPQ=60;MATEID=665982:1;MATENM=2;NM=3;NUMPARTS=3;SCTG=c_13_35941501_35966501_17C;SECONDARY;SPAN=153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:111:77.9:77.9,0,200:33:0:-77.73:80.78
13	35958395	665978:2	A	A[13:35957937[	12	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=665978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:35957937(-)-13:35958395(+)__13_35941501_35966501D;SPAN=458;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2
13	38483182	666631:1	A	A[13:38486065[	99	PASS	EVDNC=ASSMB;HOMSEQ=GGAA;MAPQ=60;MATEID=666631:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_13_38465001_38490001_10C;SPAN=2883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6
13	38486065	666631:2	G	]13:38483182]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GGAA;MAPQ=60;MATEID=666631:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_13_38465001_38490001_10C;SPAN=2883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6
13	40077132	667033:1	A	]13:40077229]A	72	PASS	EVDNC=ASSMB;INSERTION=AGGAAGGAAGGAGAGAAGGAAGGAAAGAGGGAAAGAAGGAAGGAAGGTAGGGAAGCGGGGGAGGAAGGAAGG;MAPQ=60;MATEID=667033:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_40057501_40082501_10C;SPAN=97;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58
13	40077229	667033:2	A	A[13:40077132[	72	PASS	EVDNC=ASSMB;INSERTION=AGGAAGGAAGGAGAGAAGGAAGGAAAGAGGGAAAGAAGGAAGGAAGGTAGGGAAGCGGGGGAGGAAGGAAGG;MAPQ=60;MATEID=667033:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_40057501_40082501_10C;SPAN=97;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58
13	42373133	667582:1	C	]13:42373518]C	75	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=667582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_42360501_42385501_8C;SPAN=385;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:50:48.8:75.2,0,48.8:27:0:-75.32:75.32
13	42373518	667582:2	T	T[13:42373133[	75	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=667582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_42360501_42385501_8C;SPAN=385;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:50:48.8:75.2,0,48.8:27:0:-75.32:75.32
13	42457888	667624:1	G	G]13:42511705]	23	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=667624:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42457888(+)-13:42511705(+)__13_42507501_42532501D;SPAN=53817;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84
13	42511705	667624:2	T	T]13:42457888]	23	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=667624:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42457888(+)-13:42511705(+)__13_42507501_42532501D;SPAN=53817;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84
13	42965789	667750:1	T	T[13:42967310[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=667750:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42965789(+)-13:42967310(-)__13_42948501_42973501D;SPAN=1521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3
13	42967310	667750:2	A	]13:42965789]A	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=667750:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42965789(+)-13:42967310(-)__13_42948501_42973501D;SPAN=1521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3
13	46145627	668526:1	A	A[13:46145943[	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGGGCA;MAPQ=60;MATEID=668526:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_13_46133501_46158501_0C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:27:7.5:82.5,7.5,0:26:0:-82.52:82.52
13	46145943	668526:2	A	]13:46145627]A	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGGGCA;MAPQ=60;MATEID=668526:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_13_46133501_46158501_0C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:27:7.5:82.5,7.5,0:26:0:-82.52:82.52
13	46526845	668674:1	T	[13:46527506[T	33	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=668674:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_13_46525501_46550501_14C;SPAN=661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:58:33.2:33.2,0,112.4:11:12:-33.21:35.64
13	46527506	668674:2	A	[13:46526845[A	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=668674:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_13_46525501_46550501_14C;SPAN=661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:58:33.2:33.2,0,112.4:11:12:-33.21:35.64
13	47537863	669085:1	C	C]13:47539357]	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669085:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:47537863(+)-13:47539357(+)__13_47530001_47555001D;SPAN=1494;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:0:12:-30.06:30.47
13	47539357	669085:2	T	T]13:47537863]	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669085:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:47537863(+)-13:47539357(+)__13_47530001_47555001D;SPAN=1494;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:0:12:-30.06:30.47
13	48282773	669322:2	A	A]12:33864471]	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=669322:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33864471(+)-13:48282773(+)__13_48265001_48290001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
13	49318685	669546:1	A	]19:32019277]A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=669546:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_49294001_49319001_26C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:14:5:-49.51:49.51
13	50495150	669774:1	A	A[13:50500942[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=669774:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:50495150(+)-13:50500942(-)__13_50470001_50495001D;SPAN=5792;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:0:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	50500942	669774:2	T	]13:50495150]T	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669774:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:50495150(+)-13:50500942(-)__13_50470001_50495001D;SPAN=5792;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:0:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	56018554	13015:2	A	A[1:53954324[	0	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=13015:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_79C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:108:6.9:0,6.9,283.8:7:0:7.251:12.08
13	57094112	671048:1	T	]13:57101297]T	39	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=671048:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_57085001_57110001_4C;SPAN=7185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:10:8:-39.39:39.39
13	57101297	671048:2	C	C[13:57094112[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=671048:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_57085001_57110001_4C;SPAN=7185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:10:8:-39.39:39.39
13	58512431	671309:1	A	A[13:58514256[	42	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=671309:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:58512431(+)-13:58514256(-)__13_58506001_58531001D;SPAN=1825;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:11:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	58514256	671309:2	A	]13:58512431]A	42	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=671309:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:58512431(+)-13:58514256(-)__13_58506001_58531001D;SPAN=1825;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:11:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	59899878	671671:1	A	A[13:59906689[	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=671671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_59902501_59927501_0C;SPAN=6811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:5:3:1.2:13.2,1.2,0:3:4:-13.2:13.2
13	59906689	671671:2	A	]13:59899878]A	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=671671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_59902501_59927501_0C;SPAN=6811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:5:3:1.2:13.2,1.2,0:3:4:-13.2:13.2
13	60886851	671890:2	A	A[3:103962954[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=671890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_60882501_60907501_30C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:9:4:-33.01:33.01
13	60888202	383809:2	C	]7:25047891]C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTC;MAPQ=60;MATEID=383809:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_25039001_25064001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:24:9.6:105.6,9.6,0:27:12:-105.6:105.6
13	61171765	671986:2	T	]8:139084311]T	29	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=671986:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_61152001_61177001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
13	66665661	680036:1	A	[13:92007460[A	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=680036:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_91997501_92022501_37C;SPAN=25341799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:7:6:-29.85:29.85
13	66665768	673423:1	T	T]13:92058480]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=673423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:66665768(+)-13:92058480(+)__13_66664501_66689501D;SPAN=25392712;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
13	71226063	916288:1	G	G]22:28674185]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916288:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:71226063(+)-22:28674185(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
13	73390558	491100:2	G	G[9:36423668[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=491100:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_36407001_36432001_29C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:14:6:-56.11:56.11
13	74341145	675549:1	T	]13:74342865]T	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCTA;MAPQ=60;MATEID=675549:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_13_74333001_74358001_1C;SPAN=1720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:41:11.4:125.4,11.4,0:30:18:-125.4:125.4
13	74342865	675549:2	A	A[13:74341145[	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TCTA;MAPQ=60;MATEID=675549:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_13_74333001_74358001_1C;SPAN=1720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:41:11.4:125.4,11.4,0:30:18:-125.4:125.4
13	78423489	676627:1	C	C[13:78424585[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCC;MAPQ=60;MATEID=676627:2;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CCC;SCTG=c_13_78424501_78449501_6C;SECONDARY;SPAN=1096;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:1:2.4:26.4,2.4,0:4:5:-26.41:26.41
13	78424585	676627:2	A	]13:78423489]A	26	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCC;MAPQ=0;MATEID=676627:1;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CCC;SCTG=c_13_78424501_78449501_6C;SECONDARY;SPAN=1096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:1:2.4:26.4,2.4,0:4:5:-26.41:26.41
13	81782375	677551:1	T	T]13:81782948]	20	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677551:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782375(+)-13:81782948(+)__13_81781001_81806001D;SPAN=573;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:34:20.3:20.3,0,63.2:0:9:-20.15:21.49
13	81782700	677552:1	T	T]13:81782901]	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782700(+)-13:81782901(+)__13_81781001_81806001D;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:40:15.2:15.2,0,84.5:0:8:-15.16:17.99
13	81782901	677552:2	T	T]13:81782700]	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782700(+)-13:81782901(+)__13_81781001_81806001D;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:40:15.2:15.2,0,84.5:0:8:-15.16:17.99
13	81782948	677551:2	A	A]13:81782375]	20	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=677551:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782375(+)-13:81782948(+)__13_81781001_81806001D;SPAN=573;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:34:20.3:20.3,0,63.2:0:9:-20.15:21.49
13	81793562	677548:2	A	]5:142077508]A	46	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=677548:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:142077508(+)-13:81793562(-)__13_81781001_81806001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
13	85488927	70988:2	T	[2:9998890[T	52	PASS	DISC_MAPQ=1;EVDNC=ASDIS;HOMSEQ=TATATAT;MAPQ=44;MATEID=70988:1;MATENM=0;NM=48;NUMPARTS=2;SCTG=c_2_9996001_10021001_50C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:6:4.8:52.8,4.8,0:11:8:-52.81:52.81
13	86269523	678532:1	C	]Un_KN707957v1_decoy:11498]C	59	PASS	EVDNC=ASSMB;HOMSEQ=AACCTTTACTGAACTTAAAATATG;MAPQ=60;MATEID=678532:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_86264501_86289501_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41
13	92007460	680036:2	T	[13:66665661[T	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=680036:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_91997501_92022501_37C;SPAN=25341799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:7:6:-29.85:29.85
13	92058480	673423:2	T	T]13:66665768]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=673423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:66665768(+)-13:92058480(+)__13_66664501_66689501D;SPAN=25392712;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
13	93608748	680421:1	G	G[13:93751818[	46	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=680421:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_13_93737001_93762001_5C;SPAN=143070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
13	93751818	680421:2	A	]13:93608748]A	46	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=680421:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_13_93737001_93762001_5C;SPAN=143070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
13	93796911	680443:1	T	]13:93797097]T	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=680443:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_93786001_93811001_10C;SPAN=186;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:12:0:-32.3:32.3
13	93797097	680443:2	T	T[13:93796911[	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=680443:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_93786001_93811001_10C;SPAN=186;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:12:0:-32.3:32.3
13	96800817	681120:1	T	]13:96829051]T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=681120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_96824001_96849001_1C;SPAN=28234;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:17:9.9:108.9,9.9,0:25:26:-108.9:108.9
13	96829051	681120:2	T	T[13:96800817[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=681120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_96824001_96849001_1C;SPAN=28234;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:17:9.9:108.9,9.9,0:25:26:-108.9:108.9
13	101241852	682110:1	C	C[13:101244073[	33	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=682110:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:101241852(+)-13:101244073(-)__13_101234001_101259001D;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:0:11:-33.01:33.01
13	101244073	682110:2	A	]13:101241852]A	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=682110:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:101241852(+)-13:101244073(-)__13_101234001_101259001D;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:0:11:-33.01:33.01
13	107584405	916294:1	C	C]22:28669946]	32	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=916294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_142C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:72:32.6:32.6,0,148.1:16:0:-32.58:36.8
13	110928542	684409:1	A	]13:110928733]A	29	PASS	EVDNC=ASSMB;HOMSEQ=ATTT;MAPQ=60;MATEID=684409:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110911501_110936501_0C;SPAN=191;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
13	110928733	684409:2	T	T[13:110928542[	29	PASS	EVDNC=ASSMB;HOMSEQ=ATTT;MAPQ=60;MATEID=684409:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110911501_110936501_0C;SPAN=191;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
13	110938204	684417:1	G	]13:110938379]G	20	PASS	EVDNC=ASSMB;INSERTION=GCATGTCCTGGAGAAAG;MAPQ=60;MATEID=684417:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110936001_110961001_10C;SPAN=175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77
13	110938379	684417:2	C	C[13:110938204[	20	PASS	EVDNC=ASSMB;INSERTION=GCATGTCCTGGAGAAAG;MAPQ=60;MATEID=684417:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110936001_110961001_10C;SPAN=175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77
13	111790677	684590:1	T	]13:111790963]T	48	PASS	EVDNC=ASSMB;HOMSEQ=TGTCCATGTCTGTCTGT;MAPQ=60;MATEID=684590:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_13_111769001_111794001_19C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77
13	111790963	684590:2	T	T[13:111790677[	48	PASS	EVDNC=ASSMB;HOMSEQ=TGTCCATGTCTGTCTGT;MAPQ=60;MATEID=684590:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_13_111769001_111794001_19C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77
13	111793420	684595:1	T	T]Un_JTFH01000010v1_decoy:9358]	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=684595:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_111769001_111794001_29C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91
13	113136637	684857:1	T	T[13:113136950[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATTCTTGTACTTTT;MAPQ=60;MATEID=684857:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_13_113116501_113141501_0C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:11:6:-46.21:46.21
13	113136950	684857:2	A	]13:113136637]A	46	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AATTCTTGTACTTTT;MAPQ=60;MATEID=684857:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_13_113116501_113141501_0C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:11:6:-46.21:46.21
13	113802656	685090:1	A	A[13:113803662[	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=685090:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:113802656(+)-13:113803662(-)__13_113802501_113827501D;SPAN=1006;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41
13	113803662	685090:2	C	]13:113802656]C	59	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=685090:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:113802656(+)-13:113803662(-)__13_113802501_113827501D;SPAN=1006;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41
14	16127970	685851:1	A	A[14:16129237[	11	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=685851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16127970(+)-14:16129237(-)__14_16121001_16146001D;SPAN=1267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:67:11:11,0,156.2:0:9:-10.88:18.53
14	16129237	685851:2	A	]14:16127970]A	11	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=685851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16127970(+)-14:16129237(-)__14_16121001_16146001D;SPAN=1267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:67:11:11,0,156.2:0:9:-10.88:18.53
14	16136222	685870:1	G	G[14:16137856[	7	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=685870:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16136222(+)-14:16137856(-)__14_16121001_16146001D;SPAN=1634;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:103:7.4:7.4,0,251.6:0:11:-7.359:21.48
14	16137856	685870:2	A	]14:16136222]A	7	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=685870:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16136222(+)-14:16137856(-)__14_16121001_16146001D;SPAN=1634;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:103:7.4:7.4,0,251.6:0:11:-7.359:21.48
14	18223617	112281:2	G	[2:132243814[G	95	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=112281:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132243814(-)-14:18223617(-)__2_132226501_132251501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:29:8.7:95.7,8.7,0:0:32:-95.72:95.72
14	20083865	686796:1	A	]14:20200104]A	31	PASS	EVDNC=ASSMB;HOMSEQ=AAATA;MAPQ=60;MATEID=686796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20188001_20213001_24C;SPAN=116239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
14	20200104	686796:2	A	A[14:20083865[	31	PASS	EVDNC=ASSMB;HOMSEQ=AAATA;MAPQ=60;MATEID=686796:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20188001_20213001_24C;SPAN=116239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
14	20254838	686826:2	A	A]5:53611921]	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAACTT;MAPQ=60;MATEID=686826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20237001_20262001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:7:4:-35.86:35.86
14	20273533	941661:1	C	]X:111769097]C	42	PASS	DISC_MAPQ=54;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=941661:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_111769001_111794001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:9:8:-42.71:42.71
14	21484465	687336:1	C	C[14:21486504[	52	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=687336:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_21486501_21511501_19C;SPAN=2039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81
14	21486504	687336:2	T	]14:21484465]T	52	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=687336:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_21486501_21511501_19C;SPAN=2039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81
14	23900202	688158:1	A	]14:23900406]A	53	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=688158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_23887501_23912501_23C;SPAN=204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:46:53.3:53.3,0,59.9:20:0:-53.09:53.14
14	23900406	688158:2	G	G[14:23900202[	53	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=688158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_23887501_23912501_23C;SPAN=204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:46:53.3:53.3,0,59.9:20:0:-53.09:53.14
14	24793131	688422:1	G	G[14:24793919[	39	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=688422:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_24769501_24794501_12C;SPAN=788;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41
14	24793919	688422:2	C	]14:24793131]C	39	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=688422:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_24769501_24794501_12C;SPAN=788;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41
14	25677909	688735:1	T	T[14:25678252[	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTAAGGTTTAT;MAPQ=60;MATEID=688735:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_25676001_25701001_30C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:22:7.8:85.8,7.8,0:22:8:-85.82:85.82
14	25678252	688735:2	G	]14:25677909]G	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTAAGGTTTAT;MAPQ=60;MATEID=688735:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_25676001_25701001_30C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:22:7.8:85.8,7.8,0:22:8:-85.82:85.82
14	26232412	688910:1	A	A[14:26232713[	17	PASS	EVDNC=ASSMB;HOMSEQ=GAAAGAAAGAA;MAPQ=60;MATEID=688910:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_26215001_26240001_53C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
14	26232713	688910:2	G	]14:26232412]G	17	PASS	EVDNC=ASSMB;HOMSEQ=GAAAGAAAGAA;MAPQ=60;MATEID=688910:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_26215001_26240001_53C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
14	29258843	689881:1	T	T[14:29259597[	95	PASS	EVDNC=ASSMB;HOMSEQ=GAGAATTCTTT;MAPQ=60;MATEID=689881:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_29253001_29278001_57C;SPAN=754;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:19:8.7:95.7,8.7,0:32:0:-95.72:95.72
14	29259597	689881:2	G	]14:29258843]G	95	PASS	EVDNC=ASSMB;HOMSEQ=GAGAATTCTTT;MAPQ=60;MATEID=689881:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_29253001_29278001_57C;SPAN=754;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:19:8.7:95.7,8.7,0:32:0:-95.72:95.72
14	29550324	689981:1	T	]14:29597866]T	38	PASS	EVDNC=ASSMB;INSERTION=AATACCTTTACCT;MAPQ=60;MATEID=689981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_29596001_29621001_6C;SPAN=47542;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
14	29597866	689981:2	A	A[14:29550324[	38	PASS	EVDNC=ASSMB;INSERTION=AATACCTTTACCT;MAPQ=60;MATEID=689981:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_29596001_29621001_6C;SPAN=47542;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
14	30183739	690144:1	T	]14:30390239]T	36	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=690144:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30380001_30405001_60C;SPAN=206500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:13:0:-37.05:37.05
14	30390239	690144:2	C	C[14:30183739[	36	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=690144:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30380001_30405001_60C;SPAN=206500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:13:0:-37.05:37.05
14	30517301	690169:1	G	G[14:30517556[	17	PASS	EVDNC=ASSMB;INSERTION=GTGCCAA;MAPQ=60;MATEID=690169:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30502501_30527501_21C;SPAN=255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:8:0:-17.13:18.75
14	30517556	690169:2	A	]14:30517301]A	17	PASS	EVDNC=ASSMB;INSERTION=GTGCCAA;MAPQ=60;MATEID=690169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30502501_30527501_21C;SPAN=255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:8:0:-17.13:18.75
14	31473803	690512:1	T	T[14:31474115[	24	PASS	EVDNC=ASSMB;HOMSEQ=GCAAATCTTTTCTT;MAPQ=60;MATEID=690512:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_31458001_31483001_77C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
14	31474115	690512:2	G	]14:31473803]G	24	PASS	EVDNC=ASSMB;HOMSEQ=GCAAATCTTTTCTT;MAPQ=60;MATEID=690512:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_31458001_31483001_77C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
14	32157501	690790:1	A	[14:32193596[A	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAC;MAPQ=60;MATEID=690790:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_32193001_32218001_25C;SPAN=36095;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:13:12.8:19.4,0,12.8:5:4:-19.51:19.51
14	32193596	690790:2	A	[14:32157501[A	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAC;MAPQ=60;MATEID=690790:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_32193001_32218001_25C;SPAN=36095;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:13:12.8:19.4,0,12.8:5:4:-19.51:19.51
14	33266964	691140:1	A	]14:33377878]A	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=691140:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_33369001_33394001_65C;SPAN=110914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:9:3:-35.86:35.86
14	33377878	691140:2	A	A[14:33266964[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=691140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_33369001_33394001_65C;SPAN=110914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:9:3:-35.86:35.86
14	34836097	691617:1	A	A[14:34836416[	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTTTCTATA;MAPQ=60;MATEID=691617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_34814501_34839501_90C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:24:0:59.4,0,0:20:0:-62.69:62.69
14	34836416	691617:2	A	]14:34836097]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTTTCTATA;MAPQ=60;MATEID=691617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_34814501_34839501_90C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:24:0:59.4,0,0:20:0:-62.69:62.69
14	34932207	691675:1	A	A[14:34932518[	30	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATTTCA;MAPQ=60;MATEID=691675:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_34912501_34937501_54C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
14	34932518	691675:2	A	]14:34932207]A	30	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATTTCA;MAPQ=60;MATEID=691675:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_34912501_34937501_54C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
14	35038580	691752:1	C	C[14:35040301[	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=691752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:35038580(+)-14:35040301(-)__14_35035001_35060001D;SPAN=1721;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96
14	35040301	691752:2	A	]14:35038580]A	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=691752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:35038580(+)-14:35040301(-)__14_35035001_35060001D;SPAN=1721;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96
14	37047457	692387:2	G	]4:135304935]G	21	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=692387:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37044001_37069001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
14	37300358	692473:1	G	G]16:61045452]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=692473:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:37300358(+)-16:61045452(+)__14_37289001_37314001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
14	37562864	692591:1	T	]14:37597657]T	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=692591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37583001_37608001_85C;SPAN=34793;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:33:11.1:122.1,11.1,0:40:0:-122.1:122.1
14	37592330	692637:1	G	]14:37715510]G	32	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GGCT;MAPQ=60;MATEID=692637:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37705501_37730501_45C;SPAN=123180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:8:9:-32.59:32.59
14	37597657	692591:2	T	T[14:37562864[	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=692591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37583001_37608001_85C;SPAN=34793;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:33:11.1:122.1,11.1,0:40:0:-122.1:122.1
14	37715510	692637:2	T	T[14:37592330[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCT;MAPQ=60;MATEID=692637:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37705501_37730501_45C;SPAN=123180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:8:9:-32.59:32.59
14	37776046	692663:1	T	T[14:37776247[	99	PASS	EVDNC=ASSMB;HOMSEQ=TGGGTCTTGATTCTTT;MAPQ=60;MATEID=692663:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_37754501_37779501_67C;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:20:9.6:105.6,9.6,0:35:0:-105.6:105.6
14	37776247	692663:2	T	]14:37776046]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TGGGTCTTGATTCTTT;MAPQ=60;MATEID=692663:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_37754501_37779501_67C;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:20:9.6:105.6,9.6,0:35:0:-105.6:105.6
14	37777674	692738:1	C	]14:37911211]C	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=692738:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37901501_37926501_37C;SPAN=133537;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:9:6:-24.86:25.27
14	37911211	692738:2	C	C[14:37777674[	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=692738:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37901501_37926501_37C;SPAN=133537;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:9:6:-24.86:25.27
14	38174306	692839:1	C	C[14:38174608[	52	PASS	EVDNC=ASSMB;HOMSEQ=CACCCTGTGCCTTTTC;MAPQ=60;MATEID=692839:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_38171001_38196001_77C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:25:9.5:52.4,0,9.5:18:0:-53.96:53.96
14	38174608	692839:2	C	]14:38174306]C	52	PASS	EVDNC=ASSMB;HOMSEQ=CACCCTGTGCCTTTTC;MAPQ=60;MATEID=692839:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_38171001_38196001_77C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:25:9.5:52.4,0,9.5:18:0:-53.96:53.96
14	39033514	693049:1	T	]14:39033642]T	85	PASS	EVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=693049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39028501_39053501_78C;SPAN=128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:61:65.6:85.4,0,65.6:31:0:-85.28:85.28
14	39033642	693049:2	A	A[14:39033514[	85	PASS	EVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=693049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39028501_39053501_78C;SPAN=128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:61:65.6:85.4,0,65.6:31:0:-85.28:85.28
14	39411765	693274:1	C	]14:39412419]C	16	PASS	EVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=693274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39396001_39421001_45C;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:47:16.7:16.7,0,99.2:9:0:-16.5:20.04
14	39412419	693274:2	C	C[14:39411765[	16	PASS	EVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=693274:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39396001_39421001_45C;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:47:16.7:16.7,0,99.2:9:0:-16.5:20.04
14	39629205	693352:1	T	T[14:39631010[	56	PASS	EVDNC=ASSMB;HOMSEQ=AGAGTCCTGAAATAACTT;MAPQ=60;MATEID=693352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39616501_39641501_23C;SPAN=1805;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:33:23.9:56.9,0,23.9:20:0:-57.35:57.35
14	39631010	693352:2	A	]14:39629205]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AGAGTCCTGAAATAACTT;MAPQ=60;MATEID=693352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39616501_39641501_23C;SPAN=1805;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:33:23.9:56.9,0,23.9:20:0:-57.35:57.35
14	40140611	693536:1	A	A[14:40148469[	99	PASS	EVDNC=ASSMB;INSERTION=CAGGCTCCTTTGTAAATAA;MAPQ=60;MATEID=693536:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_14_40131001_40156001_3C;SPAN=7858;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7
14	40148469	693536:2	T	]14:40140611]T	99	PASS	EVDNC=ASSMB;INSERTION=CAGGCTCCTTTGTAAATAA;MAPQ=60;MATEID=693536:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_14_40131001_40156001_3C;SPAN=7858;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7
14	40498185	693818:1	A	A]14:40771514]	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CT;MAPQ=60;MATEID=693818:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_40768001_40793001_9C;SPAN=273329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:15:18.8:18.8,0,18.8:6:2:-18.89:18.89
14	40498855	693697:1	T	T[14:40559038[	38	PASS	EVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=693697:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_40547501_40572501_2C;SPAN=60183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:13:0:-39.01:39.01
14	40559038	693697:2	A	]14:40498855]A	38	PASS	EVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=693697:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_40547501_40572501_2C;SPAN=60183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:13:0:-39.01:39.01
14	40771514	693818:2	C	C]14:40498185]	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CT;MAPQ=60;MATEID=693818:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_40768001_40793001_9C;SPAN=273329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:15:18.8:18.8,0,18.8:6:2:-18.89:18.89
14	40906937	693878:1	T	T]14:40907574]	56	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=693878:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:40906937(+)-14:40907574(+)__14_40890501_40915501D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:34:26.9:56.6,0,26.9:0:20:-56.93:56.93
14	40907574	693878:2	T	T]14:40906937]	56	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=693878:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:40906937(+)-14:40907574(+)__14_40890501_40915501D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:34:26.9:56.6,0,26.9:0:20:-56.93:56.93
14	41200462	703848:1	G	]14:69277912]G	18	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCC;MAPQ=60;MATEID=703848:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_69261501_69286501_67C;SPAN=28077450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:16:18.8:18.8,0,18.8:1:7:-18.61:18.62
14	42279188	694411:1	T	T[14:42279553[	1	PASS	EVDNC=ASSMB;HOMSEQ=AAGTGCTGGGATTACAGGCGTGAGCCACCGT;MAPQ=60;MATEID=694411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42262501_42287501_0C;SPAN=365;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:41:1.7:1.7,0,100.7:4:0:-1.679:7.644
14	42279553	694411:2	A	]14:42279188]A	1	PASS	EVDNC=ASSMB;HOMSEQ=AAGTGCTGGGATTACAGGCGTGAGCCACCGT;MAPQ=60;MATEID=694411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42262501_42287501_0C;SPAN=365;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:41:1.7:1.7,0,100.7:4:0:-1.679:7.644
14	42291888	694422:1	T	T[14:42292221[	78	PASS	EVDNC=ASSMB;HOMSEQ=AAAATAAAAAATTTT;MAPQ=60;MATEID=694422:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_14_42287001_42312001_18C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25
14	42292221	694422:2	A	]14:42291888]A	78	PASS	EVDNC=ASSMB;HOMSEQ=AAAATAAAAAATTTT;MAPQ=60;MATEID=694422:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_14_42287001_42312001_18C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25
14	42561542	694524:2	T	[5:1364018[T	39	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=694524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42556501_42581501_72C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:5:11:-39.39:39.39
14	44082765	707096:1	T	[14:77757284[T	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=707096:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_77738501_77763501_83C;SPAN=33674519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:15:3:-48.1:48.1
14	44119784	695089:1	A	A[14:44122512[	36	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=695089:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:44119784(+)-14:44122512(-)__14_44100001_44125001D;SPAN=2728;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66
14	44122512	695089:2	A	]14:44119784]A	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=695089:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:44119784(+)-14:44122512(-)__14_44100001_44125001D;SPAN=2728;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66
14	44417492	695199:1	C	C[14:44417494[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATCTCTAGA;INSERTION=TTCCTGGTCAGTAAGACCTCAAAAGGTTAAATACTAACAACTTACACACCTTAAATGTTTATCAAAAATTACTGGGCAATATTAATTGGCTTCACTCCACCTTGGGCATAACTACTGATAAGTTACAAAACCTGTTTTCTACCCTAAAGGGCAATATAGCCCTACACTGTCCCAGGTATTTAACTCCTGCAGCAAAAAGGGAAATTGAGGAAGTAGAGCAAGCTCTTTCTCGGAGGCAACTAGATCGCATAGACCCATGATATTCAGTTCAATAGTTTGTTTTTCTTAGTAAACATTCCCTAACAGGATTAATAAGATAGATGGCCCCAGGGCTATGCTTCCTAGAATGGGTTTTTTGCTCACTTACCAGGACTAAAACACTATCTCCCTACATCCAGCTAGTTAGTAAAGTTATCTATACAGGCCACAGATGATGCCATCAGTTGCTAGGTTATGACCCTGAGGTCATAAGAATTCCTTGAGTAAAAAGTAATTCGAAGCAGTATTGCCCT;MAPQ=60;MATEID=695199:2;MATENM=0;NM=1;NUMPARTS=5;SCTG=c_14_44394001_44419001_79C;SECONDARY;SPAN=2;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:40:11.4:125.4,11.4,0:41:0:-125.4:125.4
14	44417494	695199:2	T	]14:44417492]T	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATCTCTAGA;INSERTION=TTCCTGGTCAGTAAGACCTCAAAAGGTTAAATACTAACAACTTACACACCTTAAATGTTTATCAAAAATTACTGGGCAATATTAATTGGCTTCACTCCACCTTGGGCATAACTACTGATAAGTTACAAAACCTGTTTTCTACCCTAAAGGGCAATATAGCCCTACACTGTCCCAGGTATTTAACTCCTGCAGCAAAAAGGGAAATTGAGGAAGTAGAGCAAGCTCTTTCTCGGAGGCAACTAGATCGCATAGACCCATGATATTCAGTTCAATAGTTTGTTTTTCTTAGTAAACATTCCCTAACAGGATTAATAAGATAGATGGCCCCAGGGCTATGCTTCCTAGAATGGGTTTTTTGCTCACTTACCAGGACTAAAACACTATCTCCCTACATCCAGCTAGTTAGTAAAGTTATCTATACAGGCCACAGATGATGCCATCAGTTGCTAGGTTATGACCCTGAGGTCATAAGAATTCCTTGAGTAAAAAGTAATTCGAAGCAGTATTGCCCT;MAPQ=60;MATEID=695199:1;MATENM=1;NM=0;NUMPARTS=5;SCTG=c_14_44394001_44419001_79C;SECONDARY;SPAN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:40:11.4:125.4,11.4,0:41:0:-125.4:125.4
14	45854840	861822:1	A	A]20:6368548]	27	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=861822:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:45854840(+)-20:6368548(+)__20_6345501_6370501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
14	46108735	695643:1	G	G[14:46109041[	56	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCCTCCAATTG;MAPQ=60;MATEID=695643:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46109001_46134001_13C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11
14	46109041	695643:2	A	]14:46108735]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCCTCCAATTG;MAPQ=60;MATEID=695643:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46109001_46134001_13C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11
14	46648665	701678:1	G	[14:62759566[G	99	PASS	DISC_MAPQ=31;EVDNC=ASDIS;MAPQ=41;MATEID=701678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_62744501_62769501_35C;SPAN=16110901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:17:10.5:115.5,10.5,0:31:15:-115.5:115.5
14	46956857	695916:1	T	]14:46957155]T	1	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=695916:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46942001_46967001_19C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:43:1.1:1.1,0,106.7:4:0:-1.117:7.557
14	46957155	695916:2	T	T[14:46956857[	1	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=695916:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46942001_46967001_19C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:43:1.1:1.1,0,106.7:4:0:-1.117:7.557
14	47514459	820233:1	G	G]18:6432646]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820233:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47514459(+)-18:6432646(+)__18_6419001_6444001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
14	47597634	696119:1	A	A[14:47598663[	29	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=696119:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_47579001_47604001_3C;SPAN=1029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
14	47598663	696119:2	T	]14:47597634]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=696119:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_47579001_47604001_3C;SPAN=1029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
14	47694624	820234:1	T	[18:6432597[T	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=820234:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_6419001_6444001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:11:5:-46.21:46.21
14	47771434	696185:1	C	C[X:150398269[	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=696185:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771434(+)-23:150398269(-)__14_47750501_47775501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
14	47771706	948160:1	A	]X:150398432]A	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=948160:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771706(-)-23:150398432(+)__23_150381001_150406001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11
14	48882209	696542:1	C	C[14:49023146[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAAC;INSERTION=TTAAATAGTTATTTTCAAATAACTTGATGTGATTGTGGAAAACAGTGATAGACAAATCAAAATGACCTCCAACTATAAAGAAAATTCTTGAGCCA;MAPQ=0;MATEID=696542:2;MATENM=1;NM=5;NUMPARTS=2;REPSEQ=CC;SCTG=c_14_48877501_48902501_3C;SECONDARY;SPAN=140937;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:35:8:-118.8:118.8
14	49023146	696542:2	G	]14:48882209]G	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAAC;INSERTION=TTAAATAGTTATTTTCAAATAACTTGATGTGATTGTGGAAAACAGTGATAGACAAATCAAAATGACCTCCAACTATAAAGAAAATTCTTGAGCCA;MAPQ=60;MATEID=696542:1;MATENM=5;NM=1;NUMPARTS=2;REPSEQ=CC;SCTG=c_14_48877501_48902501_3C;SECONDARY;SPAN=140937;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:35:8:-118.8:118.8
14	49725332	696842:1	A	]14:49725627]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAAAAATAATAATGTAATAAACTGCAAAAATT;MAPQ=60;MATEID=696842:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_14_49710501_49735501_8C;SPAN=295;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:86:98:117.8,0,98:42:9:-117.9:117.9
14	49725627	696842:2	T	T[14:49725332[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAAAAATAATAATGTAATAAACTGCAAAAATT;MAPQ=60;MATEID=696842:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_14_49710501_49735501_8C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:86:98:117.8,0,98:42:9:-117.9:117.9
14	50942183	697371:1	C	C[14:50942828[	79	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TCTGTCTC;MAPQ=60;MATEID=697371:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_50935501_50960501_74C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:16:18:-78.56:78.56
14	50942828	697371:2	A	]14:50942183]A	79	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TCTGTCTC;MAPQ=60;MATEID=697371:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_50935501_50960501_74C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:16:18:-78.56:78.56
14	51134695	697453:1	T	T[14:51134990[	46	PASS	EVDNC=ASSMB;HOMSEQ=TTTTTTTTT;MAPQ=60;MATEID=697453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_51131501_51156501_45C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:16:0:-48.1:48.1
14	51134990	697453:2	T	]14:51134695]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TTTTTTTTT;MAPQ=60;MATEID=697453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_51131501_51156501_45C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:16:0:-48.1:48.1
14	52201132	697857:2	G	G[4:169359842[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=697857:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:169359842(-)-14:52201132(+)__14_52185001_52210001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21
14	52425216	697955:2	T	]4:60231729]T	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=697955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_52405501_52430501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29
14	52475035	933494:1	A	]X:64507376]A	42	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=933494:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_23_64484001_64509001_20C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:10:9:-42.91:42.91
14	52476005	697967:2	T	T[4:60232158[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=697967:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_52454501_52479501_37C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:25:22.7:22.7,0,39.2:7:8:-22.68:22.95
14	54243631	698723:1	A	A[14:54246968[	34	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=698723:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54243001_54268001_35C;SPAN=3337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:30:34.4:34.4,0,41:13:0:-34.48:34.51
14	54246968	698723:2	T	]14:54243631]T	34	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=698723:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54243001_54268001_35C;SPAN=3337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:30:34.4:34.4,0,41:13:0:-34.48:34.51
14	54749560	698839:2	G	]4:153256883]G	22	PASS	EVDNC=ASSMB;INSERTION=CAAAACGCTAACAAAATAAATAG;MAPQ=60;MATEID=698839:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54733001_54758001_25C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:25:22.7:22.7,0,39.2:9:0:-22.68:22.95
14	54941811	13082:2	A	]1:53955314]A	28	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=13082:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53955314(+)-14:54941811(-)__1_53949001_53974001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
14	55912669	699197:2	C	C[4:153172444[	36	PASS	DISC_MAPQ=58;EVDNC=ASDIS;MAPQ=60;MATEID=699197:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_55909001_55934001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:11:9:-36.66:36.66
14	56200143	699337:1	A	]14:56200312]A	52	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=699337:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_56178501_56203501_117C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:21:0:-51.89:52.86
14	56200312	699337:2	T	T[14:56200143[	52	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=699337:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_56178501_56203501_117C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:21:0:-51.89:52.86
14	57720286	699947:1	C	]22:28669457]C	19	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=699947:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_57697501_57722501_12C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
14	57720286	916297:1	C	[22:28669458[C	18	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=CA;INSERTION=GTGACTGAATCCCAAAATTATATTGGTAACATGGAAATTCCTGATAGGGGAAGAATATTCCCAGAAGTGTGACCAGTTAGGGCCAAAATAAAAGGTA;MAPQ=60;MATEID=916297:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_22_28665001_28690001_91C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:111:18.5:18.5,0,259.4:15:2:-18.31:30.92
14	59078595	700449:1	G	G[14:59078888[	31	PASS	EVDNC=ASSMB;HOMSEQ=AAATAATACTTTTAG;MAPQ=60;MATEID=700449:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_59069501_59094501_45C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
14	59078888	700449:2	A	]14:59078595]A	31	PASS	EVDNC=ASSMB;HOMSEQ=AAATAATACTTTTAG;MAPQ=60;MATEID=700449:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_59069501_59094501_45C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
14	60447081	700919:1	A	[14:60474536[A	31	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=700919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:60447081(-)-14:60474536(-)__14_60466001_60491001D;SPAN=27455;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06
14	60474536	700919:2	T	[14:60447081[T	31	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=700919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:60447081(-)-14:60474536(-)__14_60466001_60491001D;SPAN=27455;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06
14	61081182	701090:1	A	]14:61081313]A	44	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701090:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61078501_61103501_19C;SPAN=131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:54:44.3:44.3,0,90.5:18:0:-44.24:45.15
14	61081313	701090:2	A	A[14:61081182[	44	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701090:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61078501_61103501_19C;SPAN=131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:54:44.3:44.3,0,90.5:18:0:-44.24:45.15
14	61172785	701114:1	A	]14:61172905]A	74	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701114:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61152001_61177001_23C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:63:74.9:74.9,0,81.5:28:0:-74.72:74.75
14	61172905	701114:2	A	A[14:61172785[	74	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701114:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61152001_61177001_23C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:63:74.9:74.9,0,81.5:28:0:-74.72:74.75
14	62759566	701678:2	A	[14:46648665[A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=701678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_62744501_62769501_35C;SPAN=16110901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:17:10.5:115.5,10.5,0:31:15:-115.5:115.5
14	63420770	701926:1	A	A[14:63421085[	53	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGTCAACCTGA;MAPQ=60;MATEID=701926:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_63406001_63431001_6C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
14	63421085	701926:2	A	]14:63420770]A	53	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGTCAACCTGA;MAPQ=60;MATEID=701926:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_63406001_63431001_6C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
14	64280428	702277:2	G	]9:30288184]G	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=702277:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_64263501_64288501_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
14	64280468	809228:1	G	G[17:57501629[	21	PASS	EVDNC=ASSMB;INSERTION=AGAACTTGTTTTATTCACCTCATCCC;MAPQ=60;MATEID=809228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_57501501_57526501_45C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11
14	64893678	702536:1	C	C[14:64896823[	64	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTTC;MAPQ=60;MATEID=702536:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_14_64876001_64901001_87C;SPAN=3145;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69
14	64896823	702536:2	A	]14:64893678]A	64	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTTC;MAPQ=60;MATEID=702536:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_14_64876001_64901001_87C;SPAN=3145;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69
14	64980572	702567:2	G	]2:193680440]G	44	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702567:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:193680440(+)-14:64980572(-)__14_64974001_64999001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:31:31.1:44.3,0,31.1:0:16:-44.17:44.17
14	65139670	702623:1	C	C[14:65141330[	99	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=GGTTCAAGCGATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=702623:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_65121001_65146001_14C;SPAN=1660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:33:12.3:135.3,12.3,0:26:28:-135.3:135.3
14	65141330	702623:2	G	]14:65139670]G	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGTTCAAGCGATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=702623:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_65121001_65146001_14C;SPAN=1660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:33:12.3:135.3,12.3,0:26:28:-135.3:135.3
14	65375817	702738:1	G	[14:65376623[G	33	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=702738:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375817(-)-14:65376623(-)__14_65366001_65391001D;SPAN=806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58
14	65375930	702740:1	A	A]14:65376501]	79	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375930(+)-14:65376501(+)__14_65366001_65391001D;SPAN=571;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:0:26:-79.22:79.22
14	65376501	702740:2	C	C]14:65375930]	79	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=702740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375930(+)-14:65376501(+)__14_65366001_65391001D;SPAN=571;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:0:26:-79.22:79.22
14	65376623	702738:2	G	[14:65375817[G	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702738:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375817(-)-14:65376623(-)__14_65366001_65391001D;SPAN=806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58
14	65433282	702815:1	T	]14:65599914]T	32	PASS	EVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=702815:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_65586501_65611501_53C;SPAN=166632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:27:32:32,0,35.3:12:0:-32.02:32.04
14	65599914	702815:2	T	T[14:65433282[	32	PASS	EVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=702815:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_65586501_65611501_53C;SPAN=166632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:27:32:32,0,35.3:12:0:-32.02:32.04
14	65602452	702822:1	G	G[14:65611229[	53	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=702822:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65602452(+)-14:65611229(-)__14_65611001_65636001D;SPAN=8777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:32:24.2:53.9,0,24.2:0:19:-54.21:54.21
14	65611229	702822:2	A	]14:65602452]A	53	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=702822:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65602452(+)-14:65611229(-)__14_65611001_65636001D;SPAN=8777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:32:24.2:53.9,0,24.2:0:19:-54.21:54.21
14	68136341	703476:1	C	C[14:68137015[	78	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=703476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_68134501_68159501_47C;SPAN=674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25
14	68137015	703476:2	C	]14:68136341]C	78	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=703476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_68134501_68159501_47C;SPAN=674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25
14	68441295	703565:1	C	C]14:68831305]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=703565:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:68441295(+)-14:68831305(+)__14_68428501_68453501D;SPAN=390010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
14	68831305	703565:2	T	T]14:68441295]	22	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=703565:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:68441295(+)-14:68831305(+)__14_68428501_68453501D;SPAN=390010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
14	69277912	703848:2	C	C[14:41200462[	18	PASS	DISC_MAPQ=26;EVDNC=ASDIS;HOMSEQ=GCC;MAPQ=60;MATEID=703848:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_69261501_69286501_67C;SPAN=28077450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:16:18.8:18.8,0,18.8:1:7:-18.61:18.62
14	69313596	703864:1	C	]14:69313758]C	47	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=703864:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_69310501_69335501_58C;SPAN=162;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:56:47:47,0,93.2:19:0:-46.98:47.84
14	69313758	703864:2	G	G[14:69313596[	47	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=703864:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_69310501_69335501_58C;SPAN=162;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:56:47:47,0,93.2:19:0:-46.98:47.84
14	72112667	704667:1	G	]14:72167699]G	40	PASS	EVDNC=ASSMB;INSERTION=TAGTGCTAAAATA;MAPQ=60;MATEID=704667:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_72152501_72177501_19C;SPAN=55032;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
14	72167699	704667:2	A	A[14:72112667[	40	PASS	EVDNC=ASSMB;INSERTION=TAGTGCTAAAATA;MAPQ=60;MATEID=704667:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_72152501_72177501_19C;SPAN=55032;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
14	72444798	704776:1	C	]14:72444882]C	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CACCTGTTCAACCCTGGGGAGAAGACCCCAGGTTGGTGACCCCTGGTTTAGGACCA;MAPQ=60;MATEID=704776:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_14_72422001_72447001_10C;SPAN=84;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:64:41.6:117.5,0,41.6:41:0:-119.2:119.2
14	72444882	704776:2	C	C[14:72444798[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CACCTGTTCAACCCTGGGGAGAAGACCCCAGGTTGGTGACCCCTGGTTTAGGACCA;MAPQ=60;MATEID=704776:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_14_72422001_72447001_10C;SPAN=84;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:64:41.6:117.5,0,41.6:41:0:-119.2:119.2
14	72639639	704857:1	A	A[14:72640358[	46	PASS	EVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=704857:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_72618001_72643001_54C;SPAN=719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
14	72640358	704857:2	C	]14:72639639]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=704857:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_72618001_72643001_54C;SPAN=719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
14	76216190	330018:2	G	[6:19764886[G	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=330018:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:28:15:-92.42:92.42
14	76531614	706461:1	G	G[14:76532816[	38	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=706461:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_76513501_76538501_40C;SPAN=1202;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03
14	76532816	706461:2	C	]14:76531614]C	38	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=55;MATEID=706461:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_76513501_76538501_40C;SPAN=1202;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03
14	77757284	707096:2	A	[14:44082765[A	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=707096:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_77738501_77763501_83C;SPAN=33674519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:15:3:-48.1:48.1
14	77757579	707094:2	G	G[11:66609733[	20	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=707094:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:66609733(-)-14:77757579(+)__14_77738501_77763501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:0:8:-20.79:20.87
14	81002783	708144:1	T	T[14:81003084[	0	PASS	EVDNC=ASSMB;HOMSEQ=CTAATGCCTCTT;MAPQ=60;MATEID=708144:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_80997001_81022001_41C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:341:42.8:0,42.8,944:16:0:43.04:25.33
14	81003084	708144:2	C	]14:81002783]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CTAATGCCTCTT;MAPQ=60;MATEID=708144:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_80997001_81022001_41C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:341:42.8:0,42.8,944:16:0:43.04:25.33
14	81320430	592458:2	A	]11:62074341]A	99	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=592458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62058501_62083501_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:31:9:99,9,0:33:0:-99.02:99.02
14	81411867	708297:1	G	G[14:81414269[	69	PASS	EVDNC=ASSMB;INSERTION=CAGAGTTAAGATAAGCA;MAPQ=60;MATEID=708297:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81413501_81438501_5C;SPAN=2402;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
14	81414269	708297:2	G	]14:81411867]G	69	PASS	EVDNC=ASSMB;INSERTION=CAGAGTTAAGATAAGCA;MAPQ=60;MATEID=708297:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81413501_81438501_5C;SPAN=2402;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
14	81668843	708414:1	C	]14:81762140]C	18	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=708414:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81756501_81781501_108C;SPAN=93297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
14	81762140	708414:2	C	C[14:81668843[	18	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=708414:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81756501_81781501_108C;SPAN=93297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
14	81817963	708444:1	T	]14:81818083]T	36	PASS	EVDNC=ASSMB;INSERTION=CCTTCCTTTCT;MAPQ=22;MATEID=708444:2;MATENM=7;NM=4;NUMPARTS=2;SCTG=c_14_81805501_81830501_94C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:46:36.8:36.8,0,76.4:15:0:-36.59:37.45
14	81818083	708444:2	T	T[14:81817963[	36	PASS	EVDNC=ASSMB;INSERTION=CCTTCCTTTCT;MAPQ=60;MATEID=708444:1;MATENM=4;NM=7;NUMPARTS=2;SCTG=c_14_81805501_81830501_94C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:46:36.8:36.8,0,76.4:15:0:-36.59:37.45
14	81939555	708465:1	G	]14:81942886]G	17	PASS	EVDNC=ASSMB;INSERTION=CCAA;MAPQ=60;MATEID=708465:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81928001_81953001_22C;SPAN=3331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24
14	81942886	708465:2	A	A[14:81939555[	17	PASS	EVDNC=ASSMB;INSERTION=CCAA;MAPQ=60;MATEID=708465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81928001_81953001_22C;SPAN=3331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24
14	82032766	708490:1	T	T[14:82036987[	22	PASS	EVDNC=ASSMB;INSERTION=AACATAAATC;MAPQ=60;MATEID=708490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_82026001_82051001_54C;SPAN=4221;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
14	82036987	708490:2	A	]14:82032766]A	22	PASS	EVDNC=ASSMB;INSERTION=AACATAAATC;MAPQ=60;MATEID=708490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_82026001_82051001_54C;SPAN=4221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
14	83169509	708910:1	T	T[14:83170140[	50	PASS	EVDNC=ASSMB;HOMSEQ=TCCAAAGACCTTTATTT;MAPQ=60;MATEID=708910:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_83153001_83178001_88C;SPAN=631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
14	83170140	708910:2	T	]14:83169509]T	50	PASS	EVDNC=ASSMB;HOMSEQ=TCCAAAGACCTTTATTT;MAPQ=60;MATEID=708910:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_83153001_83178001_88C;SPAN=631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
14	83385696	708989:1	A	A[14:83386020[	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=708989:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83373501_83398501_6C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:15:0:-43.34:43.34
14	83386020	708989:2	C	]14:83385696]C	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=708989:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83373501_83398501_6C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:15:0:-43.34:43.34
14	83666619	709085:1	T	]14:83678044]T	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=709085:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83643001_83668001_20C;SPAN=11425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:12:14:-48.77:48.77
14	83678044	709085:2	T	T[14:83666619[	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=709085:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83643001_83668001_20C;SPAN=11425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:12:14:-48.77:48.77
14	84012128	709223:1	C	]14:84017566]C	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=709223:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84010501_84035501_3C;SPAN=5438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:5:9:-26.4:28.44
14	84017566	709223:2	A	A[14:84012128[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=709223:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84010501_84035501_3C;SPAN=5438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:5:9:-26.4:28.44
14	84672802	709441:1	A	A[14:84673282[	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=709441:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_84672001_84697001_149C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:24:7.8:85.8,7.8,0:17:19:-85.82:85.82
14	84673282	709441:2	A	]14:84672802]A	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=709441:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_84672001_84697001_149C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:24:7.8:85.8,7.8,0:17:19:-85.82:85.82
14	84860828	709538:1	G	]14:84867210]G	18	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=709538:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84843501_84868501_49C;SPAN=6382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65
14	84867210	709538:2	A	A[14:84860828[	18	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=709538:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84843501_84868501_49C;SPAN=6382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65
14	84948633	709567:1	A	]14:84948843]A	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=709567:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84941501_84966501_40C;SPAN=210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:53:21.5:21.5,0,110.6:11:0:-21.41:24.93
14	84948843	709567:2	A	A[14:84948633[	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=709567:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84941501_84966501_40C;SPAN=210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:53:21.5:21.5,0,110.6:11:0:-21.41:24.93
14	86616493	710249:1	A	]14:86637764]A	35	PASS	EVDNC=ASSMB;HOMSEQ=AGGG;MAPQ=60;MATEID=710249:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_86632001_86657001_52C;SPAN=21271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
14	86637764	710249:2	G	G[14:86616493[	35	PASS	EVDNC=ASSMB;HOMSEQ=AGGG;MAPQ=60;MATEID=710249:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_86632001_86657001_52C;SPAN=21271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
14	87380711	710517:1	A	]14:87382035]A	42	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=710517:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_6C;SPAN=1324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:59:42.8:42.8,0,105.5:18:0:-42.83:44.31
14	87382035	710517:2	A	A[14:87380711[	42	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=710517:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_6C;SPAN=1324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:59:42.8:42.8,0,105.5:18:0:-42.83:44.31
14	87391720	710518:1	T	T[14:87392040[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAATCGT;MAPQ=60;MATEID=710518:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_8C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:23:9.6:105.6,9.6,0:35:0:-105.6:105.6
14	87392040	710518:2	A	]14:87391720]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAATCGT;MAPQ=60;MATEID=710518:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_8C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:23:9.6:105.6,9.6,0:35:0:-105.6:105.6
14	88942494	711024:1	C	C[14:88942735[	79	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAAGCTC;MAPQ=60;MATEID=711024:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_88935001_88960001_17C;SPAN=241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31
14	88942735	711024:2	C	]14:88942494]C	79	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAAGCTC;MAPQ=60;MATEID=711024:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_88935001_88960001_17C;SPAN=241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31
14	96428716	714013:1	A	]14:96515169]A	61	PASS	DISC_MAPQ=44;EVDNC=ASDIS;INSERTION=TTAATTTTTTAATTTTAAATGATTTAATTTTAA;MAPQ=60;MATEID=714013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_96505501_96530501_12C;SPAN=86453;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:27:5.6:61.7,0,5.6:19:9:-64.38:64.38
14	96515169	714013:2	T	T[14:96428716[	61	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTTTTTAATTTTAAATGATTTAATTTTAA;MAPQ=60;MATEID=714013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_96505501_96530501_12C;SPAN=86453;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:27:5.6:61.7,0,5.6:19:9:-64.38:64.38
14	98308198	714618:1	G	G[14:98308510[	47	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAGGAGGAGGGAG;MAPQ=60;MATEID=714618:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_98294001_98319001_62C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03
14	98308510	714618:2	A	]14:98308198]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAGGAGGAGGGAG;MAPQ=60;MATEID=714618:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_98294001_98319001_62C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03
14	98317666	714629:1	T	T[14:98318751[	41	PASS	EVDNC=ASSMB;HOMSEQ=ATTATGAATTGAAAGATTTTTTT;MAPQ=60;MATEID=714629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_98318501_98343501_158C;SPAN=1085;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
14	98318751	714629:2	A	]14:98317666]A	41	PASS	EVDNC=ASSMB;HOMSEQ=ATTATGAATTGAAAGATTTTTTT;MAPQ=60;MATEID=714629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_98318501_98343501_158C;SPAN=1085;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
14	101524539	715689:1	A	A[14:101524866[	24	PASS	EVDNC=ASSMB;HOMSEQ=TTTGCCATTA;MAPQ=60;MATEID=715689:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_101503501_101528501_21C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
14	101524866	715689:2	T	]14:101524539]T	24	PASS	EVDNC=ASSMB;HOMSEQ=TTTGCCATTA;MAPQ=60;MATEID=715689:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_101503501_101528501_21C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
14	101998996	715900:1	C	]14:102036556]C	51	PASS	EVDNC=ASSMB;INSERTION=TATAGTCCCAGA;MAPQ=60;MATEID=715900:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_102018001_102043001_94C;SPAN=37560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
14	102036556	715900:2	A	A[14:101998996[	51	PASS	EVDNC=ASSMB;INSERTION=TATAGTCCCAGA;MAPQ=60;MATEID=715900:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_102018001_102043001_94C;SPAN=37560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
14	103842390	716565:2	C	[11:66496959[C	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGG;MAPQ=60;MATEID=716565:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103831001_103856001_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:10:5:-34.32:34.32
14	103896552	716586:1	A	]14:103896896]A	4	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=716586:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:103896552(-)-14:103896896(+)__14_103880001_103905001D;SPAN=344;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:78:4.7:4.7,0,189.5:0:8:-4.483:15.47
14	103896896	716586:2	C	C[14:103896552[	4	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=716586:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:103896552(-)-14:103896896(+)__14_103880001_103905001D;SPAN=344;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:78:4.7:4.7,0,189.5:0:8:-4.483:15.47
14	103910481	716602:2	G	G]11:66501326]	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=716602:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103904501_103929501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:8:6:-33.92:33.92
14	104206456	716693:2	G	]2:237623393]G	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=716693:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_104198501_104223501_154C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
14	104950889	717030:1	G	G[14:104951841[	29	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=717030:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:104950889(+)-14:104951841(-)__14_104933501_104958501D;SPAN=952;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:0:12:-29.21:29.92
14	104951841	717030:2	C	]14:104950889]C	29	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=717030:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:104950889(+)-14:104951841(-)__14_104933501_104958501D;SPAN=952;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:0:12:-29.21:29.92
14	105162463	717131:1	C	]14:105162670]C	29	PASS	EVDNC=ASSMB;HOMSEQ=CCAGGGCACCTTAAAGCCCAGG;MAPQ=60;MATEID=717131:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_105154001_105179001_66C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:85:29:29,0,184.1:16:0:-28.92:35.5
14	105162670	717131:2	G	G[14:105162463[	29	PASS	EVDNC=ASSMB;HOMSEQ=CCAGGGCACCTTAAAGCCCAGG;MAPQ=60;MATEID=717131:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_105154001_105179001_66C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:85:29:29,0,184.1:16:0:-28.92:35.5
14	105573461	717396:1	C	C[14:105693709[	52	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=717396:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105573461(+)-14:105693709(-)__14_105693001_105718001D;SPAN=120248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:14:4.8:52.8,4.8,0:0:18:-52.81:52.81
14	105623442	717296:1	C	C[14:105642051[	5	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=717296:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105623442(+)-14:105642051(-)__14_105619501_105644501D;SPAN=18609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:99:5.3:5.3,0,242.9:0:10:-5.182:19.27
14	105642051	717296:2	T	]14:105623442]T	5	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=717296:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105623442(+)-14:105642051(-)__14_105619501_105644501D;SPAN=18609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:99:5.3:5.3,0,242.9:0:10:-5.182:19.27
14	105646374	717325:1	T	]14:105646476]T	26	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCCTCCCACCGGCCCTGCTCACCTGTGGCTGC;MAPQ=11;MATEID=717325:2;MATENM=1;NM=3;NUMPARTS=3;REPSEQ=CC;SCTG=c_14_105619501_105644501_306C;SPAN=102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:0:2.4:26.4,2.4,0:9:0:-26.41:26.41
14	105646476	717325:2	C	C[14:105646374[	26	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCCTCCCACCGGCCCTGCTCACCTGTGGCTGC;MAPQ=60;MATEID=717325:1;MATENM=3;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_14_105619501_105644501_306C;SPAN=102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:0:2.4:26.4,2.4,0:9:0:-26.41:26.41
14	105693709	717396:2	A	]14:105573461]A	52	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=717396:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105573461(+)-14:105693709(-)__14_105693001_105718001D;SPAN=120248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:14:4.8:52.8,4.8,0:0:18:-52.81:52.81
14	106249864	717675:2	C	]4:148637296]C	18	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=717675:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106232001_106257001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87
14	106300357	717708:1	T	T[14:106300677[	83	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGAATTTTTCATTTCTTTT;MAPQ=60;MATEID=717708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106281001_106306001_124C;SPAN=320;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:54:50.9:83.9,0,50.9:24:6:-84.25:84.25
14	106300677	717708:2	C	]14:106300357]C	83	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CGAATTTTTCATTTCTTTT;MAPQ=41;MATEID=717708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106281001_106306001_124C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:54:50.9:83.9,0,50.9:24:6:-84.25:84.25
14	106727963	718064:1	A	A[14:106775262[	99	PASS	EVDNC=ASSMB;HOMSEQ=ACAGA;MAPQ=60;MATEID=718064:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_14_106771001_106796001_94C;SPAN=47299;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:25:9.9:108.9,9.9,0:36:0:-108.9:108.9
14	106775262	718064:2	A	]14:106727963]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ACAGA;MAPQ=60;MATEID=718064:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_14_106771001_106796001_94C;SPAN=47299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:25:9.9:108.9,9.9,0:36:0:-108.9:108.9
15	17009488	718140:1	A	]15:17481101]A	26	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=718140:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17009488(-)-15:17481101(+)__15_17003001_17028001D;SPAN=471613;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:35:26.6:26.6,0,59.6:0:11:-26.47:27.25
15	17090500	718529:1	T	]15:17093747]T	99	PASS	DISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=60;MATEID=718529:2;MATENM=10;NM=1;NUMPARTS=2;SCTG=c_15_17076501_17101501_143C;SPAN=3247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:79:33:21.9:240.9,21.9,0:64:15:-241:241
15	17090542	718583:1	T	]15:17103384]T	21	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=718583:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17090542(-)-15:17103384(+)__15_17101001_17126001D;SPAN=12842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34
15	17093747	718540:1	A	A[15:17163323[	99	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=32;MATEID=718540:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_17076501_17101501_72C;SPAN=69576;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:67:14:18.6:204.6,18.6,0:59:8:-204.7:204.7
15	17093747	718529:2	A	A[15:17090500[	99	PASS	DISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=30;MATEID=718529:1;MATENM=1;NM=10;NUMPARTS=2;SCTG=c_15_17076501_17101501_143C;SPAN=3247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:79:33:21.9:240.9,21.9,0:64:15:-241:241
15	17103384	718583:2	C	C[15:17090542[	21	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=718583:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17090542(-)-15:17103384(+)__15_17101001_17126001D;SPAN=12842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34
15	17103407	718596:1	A	A[15:17163364[	18	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=718596:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103407(+)-15:17163364(-)__15_17101001_17126001D;SPAN=59957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:0:8:-18.82:19.57
15	17103493	718685:1	T	T[15:17494314[	49	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=718685:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103493(+)-15:17494314(-)__15_17493001_17518001D;SPAN=390821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:9:4.5:49.5,4.5,0:0:17:-49.51:49.51
15	17163323	718540:2	T	]15:17093747]T	99	PASS	DISC_MAPQ=14;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=54;MATEID=718540:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_17076501_17101501_72C;SPAN=69576;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:67:14:18.6:204.6,18.6,0:59:8:-204.7:204.7
15	17163364	718596:2	A	]15:17103407]A	18	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=718596:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103407(+)-15:17163364(-)__15_17101001_17126001D;SPAN=59957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:0:8:-18.82:19.57
15	17481101	718140:2	T	T[15:17009488[	26	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=718140:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17009488(-)-15:17481101(+)__15_17003001_17028001D;SPAN=471613;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:35:26.6:26.6,0,59.6:0:11:-26.47:27.25
15	17494314	718685:2	G	]15:17103493]G	49	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=718685:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103493(+)-15:17494314(-)__15_17493001_17518001D;SPAN=390821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:9:4.5:49.5,4.5,0:0:17:-49.51:49.51
15	18358071	718981:1	T	]15:19563836]T	0	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=718981:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:18358071(-)-15:19563836(+)__15_19551001_19576001D;SPAN=1205765;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:214:16.9:0,16.9,571:0:13:17.24:22.07
15	19563836	718981:2	A	A[15:18358071[	0	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=718981:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:18358071(-)-15:19563836(+)__15_19551001_19576001D;SPAN=1205765;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:214:16.9:0,16.9,571:0:13:17.24:22.07
15	20340255	719837:1	G	]15:20342236]G	15	PASS	EVDNC=ASSMB;HOMSEQ=GCCAAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCAGC;MAPQ=60;MATEID=719837:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_15_20335001_20360001_235C;SPAN=1981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:181:15.1:15.1,0,440.9:20:0:-15.14:39.36
15	20340976	719853:1	G	]15:20342557]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGCCAAGCCAGCC;MAPQ=60;MATEID=719853:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_15_20335001_20360001_516C;SPAN=1581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:10:293:49.1:0,49.1,835.1:10:0:49.35:14.43
15	20342236	719837:2	C	C[15:20340255[	15	PASS	EVDNC=ASSMB;HOMSEQ=GCCAAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCAGC;MAPQ=60;MATEID=719837:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_15_20335001_20360001_235C;SPAN=1981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:181:15.1:15.1,0,440.9:20:0:-15.14:39.36
15	20342557	719853:2	C	C[15:20340976[	0	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGCCAAGCCAGCC;MAPQ=60;MATEID=719853:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_15_20335001_20360001_516C;SPAN=1581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:10:293:49.1:0,49.1,835.1:10:0:49.35:14.43
15	20376251	719952:1	G	G[15:20384361[	83	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AATACTATGCAGCCATAAGAAAGGATGAGTTCATGTCCTTTG;MAPQ=58;MATEID=719952:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_20359501_20384501_234C;SPAN=8110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:89:83.9:83.9,0,140:19:15:-83.92:84.69
15	20384361	719952:2	A	]15:20376251]A	83	PASS	DISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=AATACTATGCAGCCATAAGAAAGGATGAGTTCATGTCCTTTG;MAPQ=41;MATEID=719952:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_20359501_20384501_234C;SPAN=8110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:89:83.9:83.9,0,140:19:15:-83.92:84.69
15	23961921	721360:1	C	C[15:23962220[	39	PASS	EVDNC=ASSMB;HOMSEQ=AAAATTACTCC;MAPQ=60;MATEID=721360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_23961001_23986001_113C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
15	23962220	721360:2	A	]15:23961921]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AAAATTACTCC;MAPQ=60;MATEID=721360:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_23961001_23986001_113C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
15	25686249	722044:1	G	G[15:25687234[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=722044:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_25676001_25701001_104C;SPAN=985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:8:10:-35.33:35.33
15	25687234	722044:2	G	]15:25686249]G	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=722044:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_25676001_25701001_104C;SPAN=985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:8:10:-35.33:35.33
15	29700693	723297:2	A	[9:117377297[A	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=723297:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_29694001_29719001_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:6:8:-39.61:39.61
15	30173126	723413:2	G	]1:202625106]G	31	PASS	DISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=GTGTGTGG;INSERTION=TGTTGTGTGTGGCCTGTAATAGG;MAPQ=60;MATEID=723413:1;MATENM=1;NM=0;NUMPARTS=3;REPSEQ=GTGTGTGT;SCTG=c_15_30159501_30184501_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:33:11:31,0,11:10:10:-31.29:31.29
15	31950557	723963:1	T	]15:31956568]T	26	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=723963:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_15_31948001_31973001_63C;SPAN=6011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
15	31956568	723963:2	G	G[15:31950557[	26	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=723963:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_15_31948001_31973001_63C;SPAN=6011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
15	31999032	723972:1	T	T[15:31999326[	42	PASS	EVDNC=ASSMB;HOMSEQ=CAGCTCGTGGTTTTT;MAPQ=60;MATEID=723972:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_31997001_32022001_54C;SPAN=294;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
15	31999326	723972:2	C	]15:31999032]C	42	PASS	EVDNC=ASSMB;HOMSEQ=CAGCTCGTGGTTTTT;MAPQ=60;MATEID=723972:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_31997001_32022001_54C;SPAN=294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
15	34449542	724964:1	A	A[15:34449833[	23	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTGGAAGCTA;MAPQ=60;MATEID=724964:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_34447001_34472001_8C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:5:4:-23.11:23.11
15	34449833	724964:2	A	]15:34449542]A	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTGGAAGCTA;MAPQ=60;MATEID=724964:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_34447001_34472001_8C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:5:4:-23.11:23.11
15	34716832	725053:1	T	T[15:34717151[	52	PASS	EVDNC=ASSMB;HOMSEQ=CCAAGCAGTGGCTTTCT;MAPQ=60;MATEID=725053:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_34716501_34741501_34C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:24:6.5:52.7,0,6.5:18:0:-54.59:54.59
15	34717151	725053:2	C	]15:34716832]C	52	PASS	EVDNC=ASSMB;HOMSEQ=CCAAGCAGTGGCTTTCT;MAPQ=60;MATEID=725053:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_34716501_34741501_34C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:24:6.5:52.7,0,6.5:18:0:-54.59:54.59
15	38974815	726371:1	T	T[15:38975158[	72	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATTTATT;MAPQ=60;MATEID=726371:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_15_38955001_38980001_114C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:23:6.6:72.6,6.6,0:24:0:-72.62:72.62
15	38975158	726371:2	G	]15:38974815]G	72	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATTTATT;MAPQ=60;MATEID=726371:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_15_38955001_38980001_114C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:23:6.6:72.6,6.6,0:24:0:-72.62:72.62
15	39080194	726424:1	A	A[15:39081260[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=726424:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_15_39077501_39102501_79C;SPAN=1066;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:7:7:-39.61:39.61
15	39081260	726424:2	T	]15:39080194]T	39	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=TTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=726424:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_15_39077501_39102501_79C;SPAN=1066;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:7:7:-39.61:39.61
15	39452190	726529:1	A	A[15:39452659[	89	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=726529:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_39445001_39470001_11C;SPAN=469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:28:8.1:89.1,8.1,0:29:0:-89.12:89.12
15	39452659	726529:2	A	]15:39452190]A	89	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=726529:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_39445001_39470001_11C;SPAN=469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:28:8.1:89.1,8.1,0:29:0:-89.12:89.12
15	39702424	629585:2	A	]12:56596312]A	85	PASS	EVDNC=ASSMB;INSERTION=AGCTAGGTGGATTTTCTCTTC;MAPQ=60;MATEID=629585:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_56595001_56620001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82
15	40561981	726817:2	T	[7:26201745[T	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=726817:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_40547501_40572501_61C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:8:2:-24.37:24.37
15	40561991	384129:2	T	T]7:26213338]	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATATTTTTTTTTTAAAGAAATATAT;MAPQ=60;MATEID=384129:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_26190501_26215501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:44:30.5:30.5,0,80:11:5:-30.55:31.78
15	43844862	727594:1	A	A[15:43846655[	46	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=727594:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_43830501_43855501_14C;SPAN=1793;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
15	43846655	727594:2	G	]15:43844862]G	46	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=727594:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_43830501_43855501_14C;SPAN=1793;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
15	44932069	727843:1	C	C[15:44943043[	56	PASS	DISC_MAPQ=50;EVDNC=ASDIS;MAPQ=60;MATEID=727843:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_44933001_44958001_10C;SPAN=10974;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11
15	44943043	727843:2	G	]15:44932069]G	56	PASS	DISC_MAPQ=5;EVDNC=ASDIS;MAPQ=18;MATEID=727843:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_44933001_44958001_10C;SPAN=10974;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11
15	45775782	728113:1	T	T[15:45776117[	56	PASS	EVDNC=ASSMB;HOMSEQ=CAGTACTCAGATTTCT;MAPQ=60;MATEID=728113:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_45766001_45791001_17C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:59:56:56,0,92.3:22:0:-56.04:56.53
15	45776117	728113:2	C	]15:45775782]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CAGTACTCAGATTTCT;MAPQ=60;MATEID=728113:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_45766001_45791001_17C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:59:56:56,0,92.3:22:0:-56.04:56.53
15	46568509	728314:1	C	C[15:46568971[	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=728314:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_46550001_46575001_131C;SPAN=462;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31
15	46568971	728314:2	G	]15:46568509]G	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=728314:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_46550001_46575001_131C;SPAN=462;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31
15	48258079	728721:1	C	C[15:48258385[	66	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGTGACCTTTAC;MAPQ=60;MATEID=728721:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_48240501_48265501_24C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:22:0:-66.02:66.02
15	48258385	728721:2	A	]15:48258079]A	66	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGTGACCTTTAC;MAPQ=60;MATEID=728721:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_48240501_48265501_24C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:22:0:-66.02:66.02
15	51039721	729920:1	A	]15:51222553]A	39	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGCC;MAPQ=60;MATEID=729920:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_51205001_51230001_0C;SPAN=182832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:48:39.5:39.5,0,79.1:13:10:-39.32:40.13
15	51060779	729897:1	T	]15:51135960]T	14	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=729897:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_51131501_51156501_26C;SPAN=75181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:53:14.9:14.9,0,117.2:9:0:-14.81:19.52
15	51135960	729897:2	T	T[15:51060779[	14	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=729897:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_51131501_51156501_26C;SPAN=75181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:53:14.9:14.9,0,117.2:9:0:-14.81:19.52
15	51222553	729920:2	C	C[15:51039721[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGCC;MAPQ=60;MATEID=729920:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_51205001_51230001_0C;SPAN=182832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:48:39.5:39.5,0,79.1:13:10:-39.32:40.13
15	53117362	730799:2	T	T]10:3040693]	42	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=730799:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:3040693(+)-15:53117362(+)__15_53116001_53141001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:2:3.9:42.9,3.9,0:0:14:-42.91:42.91
15	54266895	731383:1	A	A]15:54267497]	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731383:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54266895(+)-15:54267497(+)__15_54243001_54268001D;SPAN=602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:59:32.9:32.9,0,115.4:0:15:-32.93:35.51
15	54267497	731383:2	C	C]15:54266895]	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731383:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54266895(+)-15:54267497(+)__15_54243001_54268001D;SPAN=602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:59:32.9:32.9,0,115.4:0:15:-32.93:35.51
15	54926147	731620:1	C	C[15:54932265[	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731620:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54926147(+)-15:54932265(-)__15_54904501_54929501D;SPAN=6118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
15	54932265	731620:2	C	]15:54926147]C	59	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=731620:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54926147(+)-15:54932265(-)__15_54904501_54929501D;SPAN=6118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
15	55137708	731713:1	T	T[15:55138016[	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGAACTTGCTTTA;MAPQ=60;MATEID=731713:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_55125001_55150001_39C;SPAN=308;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:76:17:21:231,21,0:58:23:-231.1:231.1
15	55138016	731713:2	T	]15:55137708]T	99	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAGAACTTGCTTTA;MAPQ=60;MATEID=731713:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_55125001_55150001_39C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:76:17:21:231,21,0:58:23:-231.1:231.1
15	55307268	731907:1	T	]15:55519627]T	14	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=731907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55517001_55542001_38C;SPAN=212359;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27
15	55363401	731803:1	A	A[15:55364830[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=731803:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:55363401(+)-15:55364830(-)__15_55345501_55370501D;SPAN=1429;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:17:12.6:138.6,12.6,0:0:45:-138.6:138.6
15	55364830	731803:2	A	]15:55363401]A	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=731803:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:55363401(+)-15:55364830(-)__15_55345501_55370501D;SPAN=1429;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:17:12.6:138.6,12.6,0:0:45:-138.6:138.6
15	55519627	731907:2	T	T[15:55307268[	14	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=731907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55517001_55542001_38C;SPAN=212359;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27
15	55959268	732153:2	T	]6:9347213]T	10	PASS	EVDNC=ASSMB;HOMSEQ=TTAG;MAPQ=60;MATEID=732153:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55958001_55983001_95C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:44:10.7:10.7,0,99.8:7:0:-10.74:14.97
15	56758841	732595:1	T	T[15:57242173[	19	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=732595:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_57232001_57257001_7C;SPAN=483332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07
15	56767901	763324:1	A	A[16:35481713[	29	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=763324:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_35476001_35501001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
15	57242173	732595:2	G	]15:56758841]G	19	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=732595:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_57232001_57257001_7C;SPAN=483332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07
15	58484217	732918:1	T	]15:58485484]T	24	PASS	EVDNC=ASSMB;HOMSEQ=TCA;MAPQ=60;MATEID=732918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_58481501_58506501_52C;SPAN=1267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
15	58485484	732918:2	A	A[15:58484217[	24	PASS	EVDNC=ASSMB;HOMSEQ=TCA;MAPQ=60;MATEID=732918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_58481501_58506501_52C;SPAN=1267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
15	62413896	734250:1	T	T[15:62415594[	33	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=734250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62401501_62426501_7C;SPAN=1698;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92
15	62415594	734250:2	A	]15:62413896]A	33	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=734250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62401501_62426501_7C;SPAN=1698;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92
15	62731836	734367:2	G	[8:43588080[G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=734367:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62720001_62745001_57C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:11:8:-50.34:50.34
15	63304215	734738:1	C	]15:63530798]C	15	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=734738:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_63528501_63553501_77C;SPAN=226583;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:27:15.5:15.5,0,51.8:7:0:-15.52:16.64
15	63530798	734738:2	A	A[15:63304215[	15	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=734738:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_63528501_63553501_77C;SPAN=226583;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:27:15.5:15.5,0,51.8:7:0:-15.52:16.64
15	66585336	735943:1	C	C[15:66586077[	85	PASS	EVDNC=ASSMB;HOMSEQ=TAGCTGGGATTACAGGCATGTGCCACC;MAPQ=60;MATEID=735943:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_15_66566501_66591501_5C;SPAN=741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:15:7.8:85.8,7.8,0:28:0:-85.82:85.82
15	66586077	735943:2	T	]15:66585336]T	85	PASS	EVDNC=ASSMB;HOMSEQ=TAGCTGGGATTACAGGCATGTGCCACC;MAPQ=60;MATEID=735943:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_15_66566501_66591501_5C;SPAN=741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:15:7.8:85.8,7.8,0:28:0:-85.82:85.82
15	66791433	736010:1	A	A[15:66791732[	29	PASS	EVDNC=ASSMB;INSERTION=TCCA;MAPQ=60;MATEID=736010:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_66787001_66812001_57C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92
15	66791732	736010:2	T	]15:66791433]T	29	PASS	EVDNC=ASSMB;INSERTION=TCCA;MAPQ=60;MATEID=736010:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_66787001_66812001_57C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92
15	67112365	736108:1	T	T[15:67113267[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGATGAGGTTTCACCGTGTT;MAPQ=60;MATEID=736108:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_67105501_67130501_22C;SPAN=902;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:4:5:-21.63:21.63
15	67113267	736108:2	T	]15:67112365]T	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGATGAGGTTTCACCGTGTT;MAPQ=60;MATEID=736108:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_67105501_67130501_22C;SPAN=902;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:4:5:-21.63:21.63
15	68133682	736498:1	A	A[15:68136590[	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGAAATTTAGATTTTTA;MAPQ=60;MATEID=736498:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_15_68134501_68159501_0C;SPAN=2908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:13:12.6:138.6,12.6,0:46:0:-138.6:138.6
15	68136590	736498:2	C	]15:68133682]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGAAATTTAGATTTTTA;MAPQ=60;MATEID=736498:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_15_68134501_68159501_0C;SPAN=2908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:13:12.6:138.6,12.6,0:46:0:-138.6:138.6
15	70547227	737285:2	G	]6:122850286]G	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=737285:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_70535501_70560501_58C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:22:13.8:151.8,13.8,0:38:23:-151.8:151.8
15	70729514	737352:1	A	A[15:70735170[	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAGATGGGAACAA;MAPQ=60;MATEID=737352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_70731501_70756501_0C;SPAN=5656;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41
15	70735170	737352:2	A	]15:70729514]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAGATGGGAACAA;MAPQ=60;MATEID=737352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_70731501_70756501_0C;SPAN=5656;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41
15	71199706	737458:1	G	]15:71199923]G	14	PASS	EVDNC=ASSMB;HOMSEQ=GGGTGTGTG;MAPQ=60;MATEID=737458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_71197001_71222001_79C;SPAN=217;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:43:14.3:14.3,0,93.5:8:0:-14.32:17.71
15	71199923	737458:2	G	G[15:71199706[	14	PASS	EVDNC=ASSMB;HOMSEQ=GGGTGTGTG;MAPQ=60;MATEID=737458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_71197001_71222001_79C;SPAN=217;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:43:14.3:14.3,0,93.5:8:0:-14.32:17.71
15	71364652	737504:1	A	A[15:71371197[	20	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=737504:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_71368501_71393501_2C;SPAN=6545;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
15	71371197	737504:2	A	]15:71364652]A	20	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=737504:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_71368501_71393501_2C;SPAN=6545;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
15	71416270	737524:1	A	A[15:71421352[	35	PASS	EVDNC=ASSMB;INSERTION=ACC;MAPQ=60;MATEID=737524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71417501_71442501_20C;SPAN=5082;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
15	71421352	737524:2	C	]15:71416270]C	35	PASS	EVDNC=ASSMB;INSERTION=ACC;MAPQ=60;MATEID=737524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71417501_71442501_20C;SPAN=5082;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
15	71589230	737607:1	T	T[15:71590628[	69	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=737607:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71589001_71614001_84C;SPAN=1398;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:23:0:-69.32:69.32
15	71590628	737607:2	A	]15:71589230]A	69	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=737607:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71589001_71614001_84C;SPAN=1398;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:23:0:-69.32:69.32
15	71810648	737769:1	G	]15:72011907]G	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=737769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_72005501_72030501_35C;SPAN=201259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
15	72011907	737769:2	A	A[15:71810648[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=737769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_72005501_72030501_35C;SPAN=201259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
15	72093702	737798:1	C	C[15:72095807[	95	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=737798:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:72093702(+)-15:72095807(-)__15_72079001_72104001D;SPAN=2105;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:5:8.7:95.7,8.7,0:0:32:-95.72:95.72
15	72095807	737798:2	T	]15:72093702]T	95	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=737798:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:72093702(+)-15:72095807(-)__15_72079001_72104001D;SPAN=2105;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:5:8.7:95.7,8.7,0:0:32:-95.72:95.72
15	73871864	738311:1	A	A[15:73872047[	25	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=738311:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_73867501_73892501_12C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06
15	73872047	738311:2	A	]15:73871864]A	25	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=738311:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_73867501_73892501_12C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06
15	75332393	739347:1	T	T]15:77948129]	79	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=739347:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:75332393(+)-15:77948129(+)__15_77934501_77959501D;SPAN=2615736;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
15	76592256	739029:1	T	T[15:76604598[	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=739029:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_15_76587001_76612001_9C;SPAN=12342;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8
15	76604598	739029:2	T	]15:76592256]T	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=739029:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_15_76587001_76612001_9C;SPAN=12342;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8
15	76800145	739080:2	A	]1:35259113]A	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=739080:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_76783001_76808001_25C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:29:9:-92.42:92.42
15	77716143	739264:1	T	T[15:77720242[	24	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=739264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_77714001_77739001_61C;SPAN=4099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74
15	77720242	739264:2	T	]15:77716143]T	24	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=739264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_77714001_77739001_61C;SPAN=4099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74
15	77948129	739347:2	T	T]15:75332393]	79	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=739347:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:75332393(+)-15:77948129(+)__15_77934501_77959501D;SPAN=2615736;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
15	77948962	739680:1	C	[15:78747005[C	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=739680:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:77948962(-)-15:78747005(-)__15_78743001_78768001D;SPAN=798043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
15	78058385	739396:1	C	C[15:78058657[	23	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=739396:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_78057001_78082001_13C;SPAN=272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
15	78058657	739396:2	C	]15:78058385]C	23	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=739396:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_78057001_78082001_13C;SPAN=272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
15	78747005	739680:2	C	[15:77948962[C	42	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=739680:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:77948962(-)-15:78747005(-)__15_78743001_78768001D;SPAN=798043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
15	79973158	740168:1	C	C]15:79973750]	11	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=740168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:79973158(+)-15:79973750(+)__15_79968001_79993001D;SPAN=592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:52:11.9:11.9,0,117.5:0:8:-11.79:16.98
15	79973404	740170:1	T	T[15:79973712[	31	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AA;INSERTION=TTGAATCTACCACAGCTTTGCACTGAGGCCACACATCCTACAGGCTGTTCCCAGCC;MAPQ=60;MATEID=740170:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_79968001_79993001_3C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1
15	79973712	740170:2	A	]15:79973404]A	31	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AA;INSERTION=TTGAATCTACCACAGCTTTGCACTGAGGCCACACATCCTACAGGCTGTTCCCAGCC;MAPQ=60;MATEID=740170:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_79968001_79993001_3C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1
15	79973750	740168:2	C	C]15:79973158]	11	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=740168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:79973158(+)-15:79973750(+)__15_79968001_79993001D;SPAN=592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:52:11.9:11.9,0,117.5:0:8:-11.79:16.98
15	82882879	741083:1	T	T[15:82888919[	26	PASS	EVDNC=ASSMB;HOMSEQ=CACCAGCCACT;MAPQ=60;MATEID=741083:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_82883501_82908501_8C;SPAN=6040;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:10:0:-26.55:26.57
15	82888919	741083:2	C	]15:82882879]C	26	PASS	EVDNC=ASSMB;HOMSEQ=CACCAGCCACT;MAPQ=60;MATEID=741083:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_82883501_82908501_8C;SPAN=6040;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:10:0:-26.55:26.57
15	83105131	741171:1	G	G[15:83105451[	12	PASS	EVDNC=ASSMB;HOMSEQ=AGAGAAACTG;MAPQ=60;MATEID=741171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_83104001_83129001_4C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
15	83105451	741171:2	A	]15:83105131]A	12	PASS	EVDNC=ASSMB;HOMSEQ=AGAGAAACTG;MAPQ=60;MATEID=741171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_83104001_83129001_4C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
15	83872801	741369:1	T	T[15:83875096[	92	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=741369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:83872801(+)-15:83875096(-)__15_83863501_83888501D;SPAN=2295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:19:8.4:92.4,8.4,0:0:31:-92.42:92.42
15	83875096	741369:2	T	]15:83872801]T	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:83872801(+)-15:83875096(-)__15_83863501_83888501D;SPAN=2295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:19:8.4:92.4,8.4,0:0:31:-92.42:92.42
15	84635421	741774:1	A	]15:84984456]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=741774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_84966001_84991001_39C;SPAN=349035;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
15	84984456	741774:2	T	T[15:84635421[	27	PASS	EVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=741774:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_84966001_84991001_39C;SPAN=349035;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
15	85009452	741814:1	T	]15:85130254]T	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741814:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:85009452(-)-15:85130254(+)__15_85113001_85138001D;SPAN=120802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81
15	85130254	741814:2	A	A[15:85009452[	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741814:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:85009452(-)-15:85130254(+)__15_85113001_85138001D;SPAN=120802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81
15	86013468	742255:2	T	T[6:163482678[	23	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=742255:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:163482678(-)-15:86013468(+)__15_85995001_86020001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
15	86850836	742646:1	A	]15:87105091]A	30	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=742646:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_87097501_87122501_6C;SPAN=254255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
15	87105091	742646:2	A	A[15:86850836[	30	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=742646:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_87097501_87122501_6C;SPAN=254255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
15	99031325	747000:1	C	C[15:99032380[	99	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGATTACAGGC;MAPQ=60;MATEID=747000:2;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_15_99029001_99054001_21C;SPAN=1055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:7:15:165,15,0:23:38:-165:165
15	99032380	747000:2	C	]15:99031325]C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGATTACAGGC;MAPQ=60;MATEID=747000:1;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_15_99029001_99054001_21C;SPAN=1055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:7:15:165,15,0:23:38:-165:165
15	100146718	747303:1	G	]15:100152928]G	22	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=747303:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146718(-)-15:100152928(+)__15_100131501_100156501D;SPAN=6210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:0:10:-22.05:23.72
15	100146883	747304:1	A	A[15:100153135[	50	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=747304:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146883(+)-15:100153135(-)__15_100131501_100156501D;SPAN=6252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33
15	100152928	747303:2	G	G[15:100146718[	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=747303:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146718(-)-15:100152928(+)__15_100131501_100156501D;SPAN=6210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:0:10:-22.05:23.72
15	100153135	747304:2	A	]15:100146883]A	50	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=747304:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146883(+)-15:100153135(-)__15_100131501_100156501D;SPAN=6252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33
15	100442708	747741:1	C	]15:101075010]C	29	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=747741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100442708(-)-15:101075010(+)__15_101062501_101087501D;SPAN=632302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
15	101075010	747741:2	G	G[15:100442708[	29	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=747741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100442708(-)-15:101075010(+)__15_101062501_101087501D;SPAN=632302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
16	458618	748395:1	T	]16:459067]T	0	PASS	EVDNC=ASSMB;HOMSEQ=TCATC;MAPQ=60;MATEID=748395:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_96C;SPAN=449;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:63:0.9:0,0.9,158.4:5:0:1.204:9.086
16	458641	748396:1	G	[16:563288[G	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=748396:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_49C;SPAN=104647;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:8:7:-33.64:33.8
16	459067	748395:2	C	C[16:458618[	0	PASS	EVDNC=ASSMB;HOMSEQ=TCATC;MAPQ=60;MATEID=748395:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_441001_466001_96C;SPAN=449;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:63:0.9:0,0.9,158.4:5:0:1.204:9.086
16	480785	748407:1	A	A[16:481069[	20	PASS	EVDNC=ASSMB;HOMSEQ=AAAGTGCTGGGATTACAGGCGTGAGCCA;MAPQ=60;MATEID=748407:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_465501_490501_143C;SPAN=284;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
16	481069	748407:2	A	]16:480785]A	20	PASS	EVDNC=ASSMB;HOMSEQ=AAAGTGCTGGGATTACAGGCGTGAGCCA;MAPQ=60;MATEID=748407:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_465501_490501_143C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
16	563288	748396:2	G	[16:458641[G	33	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=748396:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_49C;SPAN=104647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:8:7:-33.64:33.8
16	909933	748564:2	G	G[9:119887340[	32	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=748564:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_906501_931501_32C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
16	1372911	748770:1	C	C[16:1374091[	46	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=748770:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:1372911(+)-16:1374091(-)__16_1372001_1397001D;SPAN=1180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21
16	1374091	748770:2	A	]16:1372911]A	46	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=748770:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:1372911(+)-16:1374091(-)__16_1372001_1397001D;SPAN=1180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21
16	1795954	748893:1	A	A[16:1796104[	5	PASS	EVDNC=ASSMB;HOMSEQ=CTGCCTCAGCCTCCCAAGTAGCTGGGATTA;MAPQ=60;MATEID=748893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_1788501_1813501_49C;SPAN=150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
16	1796104	748893:2	C	]16:1795954]C	5	PASS	EVDNC=ASSMB;HOMSEQ=CTGCCTCAGCCTCCCAAGTAGCTGGGATTA;MAPQ=60;MATEID=748893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_1788501_1813501_49C;SPAN=150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
16	4306246	749770:1	T	]16:4449304]T	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGGTC;MAPQ=60;MATEID=749770:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_4434501_4459501_108C;SPAN=143058;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:5:5:-21.07:21.11
16	4449304	749770:2	C	C[16:4306246[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGGTC;MAPQ=10;MATEID=749770:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_4434501_4459501_108C;SPAN=143058;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:5:5:-21.07:21.11
16	4622158	749870:1	T	T[16:4622413[	69	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CTCAGCTTCCCGAGTAGCTGGGATTACAGGCACATGCCACCACACCCAGCTAATTTTT;MAPQ=60;MATEID=749870:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_16_4606001_4631001_94C;SPAN=255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:11:6.3:69.3,6.3,0:12:12:-69.32:69.32
16	4622413	749870:2	C	]16:4622158]C	69	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCAGCTTCCCGAGTAGCTGGGATTACAGGCACATGCCACCACACCCAGCTAATTTTT;MAPQ=60;MATEID=749870:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_16_4606001_4631001_94C;SPAN=255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:11:6.3:69.3,6.3,0:12:12:-69.32:69.32
16	6221570	750485:1	A	A]17:53112039]	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=750485:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:6221570(+)-17:53112039(+)__16_6198501_6223501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29
16	6222194	807773:1	A	[17:53111341[A	55	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=807773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_53091501_53116501_47C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:26:9.2:55.4,0,9.2:14:8:-57.2:57.2
16	6331609	750547:1	T	]16:6340893]T	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=750547:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_6321001_6346001_6C;SPAN=9284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:7:8:-19.31:21.11
16	6340893	750547:2	C	C[16:6331609[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=750547:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_6321001_6346001_6C;SPAN=9284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:7:8:-19.31:21.11
16	9394638	752239:1	T	]16:9394746]T	11	PASS	EVDNC=ASSMB;HOMSEQ=TCCCTCCCTTCCTCTCTCCCTCCCTTCCT;MAPQ=60;MATEID=752239:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_16_9383501_9408501_108C;SPAN=108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:6:1.7:11.6,0,1.7:4:0:-11.75:11.75
16	9394746	752239:2	T	T[16:9394638[	11	PASS	EVDNC=ASSMB;HOMSEQ=TCCCTCCCTTCCTCTCTCCCTCCCTTCCT;MAPQ=60;MATEID=752239:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_16_9383501_9408501_108C;SPAN=108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:6:1.7:11.6,0,1.7:4:0:-11.75:11.75
16	10676991	752774:1	C	]16:10677742]C	48	PASS	EVDNC=ASSMB;INSERTION=CCACC;MAPQ=60;MATEID=752774:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_10657501_10682501_92C;SPAN=751;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:52:48.2:48.2,0,81.2:19:0:-48.1:48.61
16	10677215	752775:1	A	A[16:10677733[	86	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=752775:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_10657501_10682501_163C;SPAN=518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:55:50.6:86.9,0,50.6:31:0:-87.35:87.35
16	10677733	752775:2	G	]16:10677215]G	86	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=752775:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_10657501_10682501_163C;SPAN=518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:55:50.6:86.9,0,50.6:31:0:-87.35:87.35
16	10677742	752774:2	A	A[16:10676991[	48	PASS	EVDNC=ASSMB;INSERTION=CCACC;MAPQ=60;MATEID=752774:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_10657501_10682501_92C;SPAN=751;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:52:48.2:48.2,0,81.2:19:0:-48.1:48.61
16	11589903	753150:1	T	T[16:11591439[	29	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CCTCCCAAAGTGCTGGGATTACAGGT;MAPQ=60;MATEID=753150:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_16_11588501_11613501_112C;SPAN=1536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:7:7:-29.21:29.92
16	11591439	753150:2	C	]16:11589903]C	29	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CCTCCCAAAGTGCTGGGATTACAGGT;MAPQ=60;MATEID=753150:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_16_11588501_11613501_112C;SPAN=1536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:7:7:-29.21:29.92
16	11908479	753253:1	G	G[16:11908788[	95	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATACAAAAATTAG;MAPQ=60;MATEID=753253:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_11907001_11932001_46C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94
16	11908788	753253:2	A	]16:11908479]A	95	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATACAAAAATTAG;MAPQ=60;MATEID=753253:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_11907001_11932001_46C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94
16	14359379	754285:1	T	T[16:14359797[	12	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=754285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_14357001_14382001_46C;SPAN=418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
16	14359797	754285:2	T	]16:14359379]T	12	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=754285:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_14357001_14382001_46C;SPAN=418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
16	16840521	755143:1	T	T[16:16846558[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGCTTAATTCTTTT;MAPQ=60;MATEID=755143:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_16831501_16856501_85C;SPAN=6037;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6
16	16846558	755143:2	A	]16:16840521]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGCTTAATTCTTTT;MAPQ=60;MATEID=755143:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_16831501_16856501_85C;SPAN=6037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6
16	18821324	755721:1	T	T[16:18827054[	72	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=755721:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18821324(+)-16:18827054(-)__16_18816001_18841001D;SPAN=5730;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62
16	18827054	755721:2	G	]16:18821324]G	72	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=755721:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18821324(+)-16:18827054(-)__16_18816001_18841001D;SPAN=5730;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62
16	18866485	755809:1	G	]16:18999859]G	33	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=755809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18866485(-)-16:18999859(+)__16_18987501_19012501D;SPAN=133374;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:0:11:-33.01:33.01
16	18999859	755809:2	G	G[16:18866485[	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=755809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18866485(-)-16:18999859(+)__16_18987501_19012501D;SPAN=133374;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:0:11:-33.01:33.01
16	20595326	756368:1	C	C[16:20601487[	26	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=756368:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:20595326(+)-16:20601487(-)__16_20580001_20605001D;SPAN=6161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
16	20601487	756368:2	G	]16:20595326]G	26	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=756368:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:20595326(+)-16:20601487(-)__16_20580001_20605001D;SPAN=6161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
16	20767235	756419:1	G	G[16:20767540[	89	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAACAGGGACCGG;MAPQ=60;MATEID=756419:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_20751501_20776501_13C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12
16	20767540	756419:2	A	]16:20767235]A	89	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAACAGGGACCGG;MAPQ=60;MATEID=756419:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_20751501_20776501_13C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12
16	20885123	756455:1	C	]16:20923726]C	26	PASS	DISC_MAPQ=52;EVDNC=ASDIS;INSERTION=AAT;MAPQ=24;MATEID=756455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_20923001_20948001_19C;SPAN=38603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:5:7:-26.69:26.69
16	20923726	756455:2	C	C[16:20885123[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAT;MAPQ=60;MATEID=756455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_20923001_20948001_19C;SPAN=38603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:5:7:-26.69:26.69
16	23036574	757051:1	T	T[16:23038210[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=757051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:23036574(+)-16:23038210(-)__16_23030001_23055001D;SPAN=1636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:58:11:16.2:178.2,16.2,0:0:58:-178.2:178.2
16	23038210	757051:2	G	]16:23036574]G	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=757051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:23036574(+)-16:23038210(-)__16_23030001_23055001D;SPAN=1636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:58:11:16.2:178.2,16.2,0:0:58:-178.2:178.2
16	23454885	757171:1	C	]16:23455660]C	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCAGGAGGCAGAGGCAGGAGAA;MAPQ=60;MATEID=757171:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_23446501_23471501_48C;SPAN=775;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:7:6:-18.18:20.65
16	23455660	757171:2	A	A[16:23454885[	18	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCAGGAGGCAGAGGCAGGAGAA;MAPQ=60;MATEID=757171:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_23446501_23471501_48C;SPAN=775;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:7:6:-18.18:20.65
16	23517232	757200:1	T	T[16:23517528[	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCAGCTAATTTTTTTCT;MAPQ=60;MATEID=757200:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_23495501_23520501_18C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:29:8.1:89.1,8.1,0:20:13:-89.12:89.12
16	23517528	757200:2	C	]16:23517232]C	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCAGCTAATTTTTTTCT;MAPQ=60;MATEID=757200:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_23495501_23520501_18C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:29:8.1:89.1,8.1,0:20:13:-89.12:89.12
16	23801697	757334:1	C	C[16:23801784[	12	PASS	EVDNC=ASSMB;HOMSEQ=CCCTTCCCTTCCCTTCCCTTC;MAPQ=60;MATEID=757334:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_23789501_23814501_0C;SPAN=87;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
16	23801784	757334:2	C	]16:23801697]C	12	PASS	EVDNC=ASSMB;HOMSEQ=CCCTTCCCTTCCCTTCCCTTC;MAPQ=60;MATEID=757334:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_23789501_23814501_0C;SPAN=87;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
16	24412394	813236:1	A	]17:68005944]A	49	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=813236:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:24412394(-)-17:68005944(+)__17_67987501_68012501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
16	25054926	757985:1	T	T[16:25126102[	25	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=757985:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25054926(+)-16:25126102(-)__16_25112501_25137501D;SPAN=71176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:0:10:-25.7:25.87
16	25055244	757986:1	G	]16:25126503]G	50	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=757986:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25055244(-)-16:25126503(+)__16_25112501_25137501D;SPAN=71259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77
16	25126102	757985:2	A	]16:25054926]A	25	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=757985:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25054926(+)-16:25126102(-)__16_25112501_25137501D;SPAN=71176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:0:10:-25.7:25.87
16	25126503	757986:2	T	T[16:25055244[	50	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=757986:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25055244(-)-16:25126503(+)__16_25112501_25137501D;SPAN=71259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77
16	25328890	758100:1	A	A[16:25331806[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=758100:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25328890(+)-16:25331806(-)__16_25308501_25333501D;SPAN=2916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
16	25331806	758100:2	T	]16:25328890]T	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=758100:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25328890(+)-16:25331806(-)__16_25308501_25333501D;SPAN=2916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
16	25806596	916305:1	T	]22:28669594]T	0	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=916305:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:116:0.5:0.5,0,290.9:10:0:-0.4034:18.55
16	25844053	887220:1	C	C[20:57997438[	16	PASS	EVDNC=ASSMB;INSERTION=ACTCCAGCAGTTATGTACTATATATATATAT;MAPQ=60;MATEID=887220:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57991501_58016501_94C;SPAN=-1;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77
16	26374051	758532:1	T	]16:26375000]T	99	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TGGATGGATGGGTG;MAPQ=60;MATEID=758532:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_16_26362001_26387001_113C;SPAN=949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:55:7.7:129.8,0,7.7:12:36:-136.1:136.1
16	26375000	758532:2	G	G[16:26374051[	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGGATGGATGGGTG;MAPQ=37;MATEID=758532:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_16_26362001_26387001_113C;SPAN=949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:55:7.7:129.8,0,7.7:12:36:-136.1:136.1
16	26596716	758591:1	T	T[16:26597045[	37	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTCTTCACATCTT;MAPQ=60;MATEID=758591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_26582501_26607501_31C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:7:8:-37.47:37.47
16	26597045	758591:2	C	]16:26596716]C	37	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTCTTCACATCTT;MAPQ=60;MATEID=758591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_26582501_26607501_31C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:7:8:-37.47:37.47
16	27941595	759035:1	C	[16:27942199[C	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CCCGGGAGGCAGAGGTTGCCGTGAGCCAAGATTGTGCCACTGCACTC;MAPQ=60;MATEID=759035:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_16_27930001_27955001_145C;SPAN=604;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:37:12.6:138.6,12.6,0:31:29:-138.6:138.6
16	27942199	759035:2	G	[16:27941595[G	99	PASS	DISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=CCCGGGAGGCAGAGGTTGCCGTGAGCCAAGATTGTGCCACTGCACTC;MAPQ=60;MATEID=759035:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_16_27930001_27955001_145C;SPAN=604;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:37:12.6:138.6,12.6,0:31:29:-138.6:138.6
16	29226840	759567:1	C	C]16:29227193]	23	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=759567:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:29226840(+)-16:29227193(+)__16_29204001_29229001D;SPAN=353;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:0:2.1:23.1,2.1,0:0:8:-23.11:23.11
16	29227193	759567:2	A	A]16:29226840]	23	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=759567:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:29226840(+)-16:29227193(+)__16_29204001_29229001D;SPAN=353;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:0:2.1:23.1,2.1,0:0:8:-23.11:23.11
16	31103571	760178:2	C	[2:3592332[C	25	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=CTCTCC;MAPQ=37;MATEID=760178:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_31090501_31115501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:8:2:-24.99:24.99
16	31371775	760282:2	G	]9:107182828]G	24	PASS	EVDNC=ASSMB;INSERTION=TATATACATTAAACAA;MAPQ=60;MATEID=760282:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_31360001_31385001_63C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
16	34226949	762361:1	A	]16:34231988]A	85	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=762361:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:34226949(-)-16:34231988(+)__16_34226501_34251501D;SPAN=5039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:59:62.6:85.7,0,62.6:0:31:-85.93:85.93
16	34231988	762361:2	C	C[16:34226949[	85	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=762361:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:34226949(-)-16:34231988(+)__16_34226501_34251501D;SPAN=5039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:59:62.6:85.7,0,62.6:0:31:-85.93:85.93
16	34277222	762434:1	A	A[16:36768349[	99	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCCTTGTGTTGTGTGTATTCA;MAPQ=31;MATEID=762434:2;MATENM=0;NM=12;NUMPARTS=2;SCTG=c_16_34275501_34300501_207C;SPAN=2491127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:36:11.1:122.1,11.1,0:33:10:-122.1:122.1
16	34647464	762802:1	A	]16:34750727]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=762802:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_34741001_34766001_84C;SPAN=103263;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34
16	34714098	762605:2	G	G]7:61065398]	82	PASS	DISC_MAPQ=5;EVDNC=ASDIS;INSERTION=CAAATAGACT;MAPQ=49;MATEID=762605:1;MATENM=7;NM=20;NUMPARTS=2;SCTG=c_16_34692001_34717001_199C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:35:3.5:82.7,0,3.5:21:10:-86.59:86.59
16	34715602	762653:1	T	T[16:36241058[	47	PASS	DISC_MAPQ=12;EVDNC=TSI_G;HOMSEQ=TGATGATTCCATTTGAGTCCATTCAATGGTGATTAAATTCGATTCCATTTGATGATTCCATTCAATTCCAT;INSERTION=TCCATTTGATGATTCCATTCAATTCCATACGATGATTCCATTCCATTCCTTTCAAAGATGAATT;MAPQ=28;MATEID=762653:2;MATENM=0;NM=10;NUMPARTS=3;SCTG=c_16_34692001_34717001_133C;SECONDARY;SPAN=1525456;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:17:4:-48.35:48.35
16	34750727	762802:2	T	T[16:34647464[	59	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=762802:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_34741001_34766001_84C;SPAN=103263;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34
16	34954400	97080:2	A	A]2:91409350]	99	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=2;MATEID=97080:1;MATENM=5;NM=2;NUMPARTS=2;SCTG=c_2_91385001_91410001_138C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:38:10.5:115.5,10.5,0:27:15:-115.5:115.5
16	35481713	763324:2	A	]15:56767901]A	29	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=763324:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_35476001_35501001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
16	36178073	395755:2	T	[7:58048127[T	19	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=395755:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58048127(-)-16:36178073(-)__7_58040501_58065501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
16	36241058	762653:2	C	]16:34715602]C	47	PASS	DISC_MAPQ=15;EVDNC=TSI_G;HOMSEQ=TGATGATTCCATTTGAGTCCATTCAATGGTGATTAAATTCGATTCCATTTGATGATTCCATTCAATTCCAT;INSERTION=TCCATTTGATGATTCCATTCAATTCCATACGATGATTCCATTCCATTCCTTTCAAAGATGAATT;MAPQ=38;MATEID=762653:1;MATENM=10;NM=0;NUMPARTS=3;SCTG=c_16_34692001_34717001_133C;SECONDARY;SPAN=1525456;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:17:4:-48.35:48.35
16	36315759	764049:1	A	A[16:36322173[	46	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=764049:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36315759(+)-16:36322173(-)__16_36309001_36334001D;SPAN=6414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:0:15:-47.02:47.02
16	36322173	764049:2	A	]16:36315759]A	46	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=764049:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36315759(+)-16:36322173(-)__16_36309001_36334001D;SPAN=6414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:0:15:-47.02:47.02
16	36325746	764074:1	T	]16:38254796]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAAACTAGACAGAA;MAPQ=41;MATEID=764074:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_16_36309001_36334001_69C;SPAN=1929050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:63:0:17.4:191.4,17.4,0:63:0:-191.4:191.4
16	36326163	764132:1	T	T[16:36335907[	28	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=764132:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326163(+)-16:36335907(-)__16_36333501_36358501D;SPAN=9744;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
16	36326237	764133:1	T	T]16:36337448]	17	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=764133:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326237(+)-16:36337448(+)__16_36333501_36358501D;SPAN=11211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
16	36335907	764132:2	C	]16:36326163]C	28	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=764132:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326163(+)-16:36335907(-)__16_36333501_36358501D;SPAN=9744;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
16	36337448	764133:2	C	C]16:36326237]	17	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=764133:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326237(+)-16:36337448(+)__16_36333501_36358501D;SPAN=11211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
16	36342786	764455:1	T	T[16:38253962[	41	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36342786(+)-16:38253962(-)__16_38244501_38269501D;SPAN=1911176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:39:41.9:41.9,0,55.1:0:16:-41.85:41.97
16	36343245	764152:1	A	]16:36351031]A	26	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=764152:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36343245(-)-16:36351031(+)__16_36333501_36358501D;SPAN=7786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:0:12:-26.68:28.57
16	36348587	764356:1	T	T[16:37915278[	56	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764356:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36348587(+)-16:37915278(-)__16_37901501_37926501D;SPAN=1566691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:10:5.1:56.1,5.1,0:0:19:-56.11:56.11
16	36350693	764203:1	A	]16:36714722]A	99	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=764203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36350693(-)-16:36714722(+)__16_36701001_36726001D;SPAN=364029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
16	36351031	764152:2	A	A[16:36343245[	26	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=764152:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36343245(-)-16:36351031(+)__16_36333501_36358501D;SPAN=7786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:0:12:-26.68:28.57
16	36353193	847883:1	A	A[19:27240874[	26	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=847883:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36353193(+)-19:27240874(-)__19_27219501_27244501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
16	36356275	764168:1	G	]16:36379416]G	46	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=764168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36356275(-)-16:36379416(+)__16_36358001_36383001D;SPAN=23141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
16	36379416	764168:2	A	A[16:36356275[	46	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=764168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36356275(-)-16:36379416(+)__16_36358001_36383001D;SPAN=23141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
16	36714399	764204:1	G	]16:36909413]G	79	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=764204:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36714399(-)-16:36909413(+)__16_36701001_36726001D;SPAN=195014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:8:7.2:79.2,7.2,0:0:26:-79.22:79.22
16	36714722	764203:2	A	A[16:36350693[	99	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=764203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36350693(-)-16:36714722(+)__16_36701001_36726001D;SPAN=364029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
16	36747721	764207:1	A	]16:37962854]A	89	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=764207:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36747721(-)-16:37962854(+)__16_36725501_36750501D;SPAN=1215133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12
16	36768349	762434:2	C	]16:34277222]C	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCCTTGTGTTGTGTGTATTCA;MAPQ=55;MATEID=762434:1;MATENM=12;NM=0;NUMPARTS=2;SCTG=c_16_34275501_34300501_207C;SPAN=2491127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:36:11.1:122.1,11.1,0:33:10:-122.1:122.1
16	36909413	764204:2	T	T[16:36714399[	79	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=764204:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36714399(-)-16:36909413(+)__16_36701001_36726001D;SPAN=195014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:8:7.2:79.2,7.2,0:0:26:-79.22:79.22
16	37104034	764363:1	T	]16:37939320]T	59	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=764363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37104034(-)-16:37939320(+)__16_37926001_37951001D;SPAN=835286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41
16	37915278	764356:2	T	]16:36348587]T	56	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=764356:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36348587(+)-16:37915278(-)__16_37901501_37926501D;SPAN=1566691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:10:5.1:56.1,5.1,0:0:19:-56.11:56.11
16	37938824	764402:1	T	]16:38166645]T	32	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=764402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37938824(-)-16:38166645(+)__16_38146501_38171501D;SPAN=227821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
16	37939320	764363:2	T	T[16:37104034[	59	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=764363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37104034(-)-16:37939320(+)__16_37926001_37951001D;SPAN=835286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41
16	37962854	764207:2	A	A[16:36747721[	89	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=764207:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36747721(-)-16:37962854(+)__16_36725501_36750501D;SPAN=1215133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12
16	38166645	764402:2	T	T[16:37938824[	32	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37938824(-)-16:38166645(+)__16_38146501_38171501D;SPAN=227821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
16	38253962	764455:2	C	]16:36342786]C	41	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=764455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36342786(+)-16:38253962(-)__16_38244501_38269501D;SPAN=1911176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:39:41.9:41.9,0,55.1:0:16:-41.85:41.97
16	38254796	764074:2	A	A[16:36325746[	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAAACTAGACAGAA;MAPQ=56;MATEID=764074:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_16_36309001_36334001_69C;SPAN=1929050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:63:0:17.4:191.4,17.4,0:63:0:-191.4:191.4
16	48247011	764887:1	G	]16:48247537]G	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48247011(-)-16:48247537(+)__16_48240501_48265501D;SPAN=526;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96
16	48247537	764887:2	T	T[16:48247011[	27	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=764887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48247011(-)-16:48247537(+)__16_48240501_48265501D;SPAN=526;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96
16	48871495	764957:1	A	A]16:48872234]	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764957:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871495(+)-16:48872234(+)__16_48853001_48878001D;SPAN=739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:0:15:-46.21:46.21
16	48871899	764958:1	G	[16:48872323[G	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764958:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871899(-)-16:48872323(-)__16_48853001_48878001D;SPAN=424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92
16	48872234	764957:2	T	T]16:48871495]	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764957:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871495(+)-16:48872234(+)__16_48853001_48878001D;SPAN=739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:0:15:-46.21:46.21
16	48872323	764958:2	T	[16:48871899[T	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764958:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871899(-)-16:48872323(-)__16_48853001_48878001D;SPAN=424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92
16	55760663	766440:1	C	[16:55833056[C	21	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=766440:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:55760663(-)-16:55833056(-)__16_55811001_55836001D;SPAN=72393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
16	55833056	766440:2	C	[16:55760663[C	21	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=766440:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:55760663(-)-16:55833056(-)__16_55811001_55836001D;SPAN=72393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
16	58613311	767109:1	C	C[16:58616361[	62	PASS	EVDNC=ASSMB;HOMSEQ=CTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=767109:2;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_16_58604001_58629001_1C;SPAN=3050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72
16	58616361	767109:2	C	]16:58613311]C	62	PASS	EVDNC=ASSMB;HOMSEQ=CTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=767109:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_16_58604001_58629001_1C;SPAN=3050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72
16	61045452	692473:2	A	A]14:37300358]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=692473:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:37300358(+)-16:61045452(+)__14_37289001_37314001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
16	61225881	767719:1	A	]16:61227731]A	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=767719:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_61225501_61250501_17C;SPAN=1850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3
16	61227731	767719:2	T	T[16:61225881[	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=767719:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_61225501_61250501_17C;SPAN=1850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3
16	61747718	767831:1	T	]16:61755731]T	35	PASS	EVDNC=ASSMB;INSERTION=ATTTCTAAAATTAAAATAACTGAATTT;MAPQ=60;MATEID=767831:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_61740001_61765001_3C;SPAN=8013;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:37:35.9:35.9,0,55.7:14:0:-35.81:36.09
16	61755731	767831:2	A	A[16:61747718[	35	PASS	EVDNC=ASSMB;INSERTION=ATTTCTAAAATTAAAATAACTGAATTT;MAPQ=60;MATEID=767831:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_61740001_61765001_3C;SPAN=8013;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:37:35.9:35.9,0,55.7:14:0:-35.81:36.09
16	63759379	768310:2	A	A[4:21714832[	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTTA;MAPQ=60;MATEID=768310:1;MATENM=0;NM=10;NUMPARTS=2;SCTG=c_16_63749001_63774001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:16:5.7:62.7,5.7,0:19:2:-62.72:62.72
16	65129169	1010103:1	T	[Un_JTFH01001895v1_decoy:1[T	33	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATTTTATATATTGTATAAGAATATATA;INSERTION=TATGTAATATCTATTTTATACACTATACAAGAATATGTAATATCTAATTATTTTATATACTGTGTAAGAATATATAACATATAGTTATTTTATACATTGTATAAGAATATATAATATCTAGTTATTTTATACATTGTATAAGAATATATAATATCTAGTTATTTTATATATTGTATAAGAATATATAATATCTAGT;MAPQ=60;MATEID=1010103:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_2738_1_2599_7C;SECONDARY;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:4:3:33,3,0:11:0:-33.01:33.01
16	69033084	769342:1	G	]16:69161208]G	16	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=769342:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_69016501_69041501_7C;SPAN=128124;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:5:3:-16.36:17.07
16	69161208	769342:2	T	T[16:69033084[	16	PASS	DISC_MAPQ=43;EVDNC=ASDIS;MAPQ=60;MATEID=769342:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_69016501_69041501_7C;SPAN=128124;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:5:3:-16.36:17.07
16	69727926	769622:1	C	[16:69728993[C	99	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CTTGA;MAPQ=60;MATEID=769622:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69727001_69752001_46C;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:34:9.3:102.3,9.3,0:20:17:-102.3:102.3
16	69728344	769625:1	G	G]16:69729043]	85	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=769625:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:69728344(+)-16:69729043(+)__16_69727001_69752001D;SPAN=699;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:0:28:-85.82:85.82
16	69728993	769622:2	T	[16:69727926[T	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTTGA;MAPQ=60;MATEID=769622:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69727001_69752001_46C;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:34:9.3:102.3,9.3,0:20:17:-102.3:102.3
16	69729043	769625:2	A	A]16:69728344]	85	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=769625:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:69728344(+)-16:69729043(+)__16_69727001_69752001D;SPAN=699;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:0:28:-85.82:85.82
16	69820428	769676:1	G	G[16:69824903[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=769676:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_82C;SPAN=4475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:8:2:-29.71:29.71
16	69820783	769677:1	A	]16:69825118]A	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAAAAGTGAACA;MAPQ=60;MATEID=769677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_98C;SPAN=4335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:6:9:-37.11:37.11
16	69824903	769676:2	T	]16:69820428]T	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=769676:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_82C;SPAN=4475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:8:2:-29.71:29.71
16	69825118	769677:2	A	A[16:69820783[	35	PASS	DISC_MAPQ=54;EVDNC=ASDIS;INSERTION=CAAAAGTGAACA;MAPQ=60;MATEID=769677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_98C;SPAN=4335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:6:9:-37.11:37.11
16	70087940	769777:2	T	[2:31423208[T	99	PASS	DISC_MAPQ=31;EVDNC=ASDIS;MAPQ=60;MATEID=769777:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_70070001_70095001_81C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:14:9.6:105.6,9.6,0:26:21:-105.6:105.6
16	70519121	769901:1	T	T[16:70519427[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGATTTGCATTTCT;MAPQ=60;MATEID=769901:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_70511001_70536001_3C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:27:15.5:15.5,0,51.8:5:4:-15.52:16.64
16	70519427	769901:2	A	]16:70519121]A	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGATTTGCATTTCT;MAPQ=60;MATEID=769901:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_70511001_70536001_3C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:27:15.5:15.5,0,51.8:5:4:-15.52:16.64
16	72122752	770476:1	C	C[16:72212287[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=770476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_72201501_72226501_29C;SPAN=89535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:9:9:-48.1:48.1
16	72212287	770476:2	C	]16:72122752]C	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=770476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_72201501_72226501_29C;SPAN=89535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:9:9:-48.1:48.1
16	74811117	771521:2	G	]7:20669897]G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=771521:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:20669897(+)-16:74811117(-)__16_74798501_74823501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
16	78122363	772813:1	T	]16:78137583]T	16	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=772813:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78130501_78155501_79C;SPAN=15220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:8:0:-16.57:18.51
16	78137583	772813:2	T	T[16:78122363[	16	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=772813:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78130501_78155501_79C;SPAN=15220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:8:0:-16.57:18.51
16	78199550	772890:1	C	C[16:78326597[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=772890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78326501_78351501_127C;SPAN=127047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:4:1.8:19.8,1.8,0:6:5:-19.8:19.8
16	78326597	772890:2	C	]16:78199550]C	19	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=772890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78326501_78351501_127C;SPAN=127047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:4:1.8:19.8,1.8,0:6:5:-19.8:19.8
16	78340090	772941:1	T	T[16:78456846[	27	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=772941:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:78340090(+)-16:78456846(-)__16_78449001_78474001D;SPAN=116756;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:0:11:-27.88:28.16
16	78456846	772941:2	A	]16:78340090]A	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=772941:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:78340090(+)-16:78456846(-)__16_78449001_78474001D;SPAN=116756;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:0:11:-27.88:28.16
16	81140260	774106:1	C	C[16:81140740[	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGAGGCAGAGGTTGCAGTGAGCCGAGATC;MAPQ=60;MATEID=774106:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_16_81119501_81144501_135C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:56:16:15.6:171.6,15.6,0:33:26:-171.6:171.6
16	81140740	774106:2	G	]16:81140260]G	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GGAGGCAGAGGTTGCAGTGAGCCGAGATC;MAPQ=60;MATEID=774106:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_16_81119501_81144501_135C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:56:16:15.6:171.6,15.6,0:33:26:-171.6:171.6
16	81577137	774271:1	A	]16:81578194]A	17	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=774271:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:81577137(-)-16:81578194(+)__16_81560501_81585501D;SPAN=1057;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:55:17.6:17.6,0,119.9:0:10:-17.55:22.02
16	81578194	774271:2	T	T[16:81577137[	17	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=774271:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:81577137(-)-16:81578194(+)__16_81560501_81585501D;SPAN=1057;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:55:17.6:17.6,0,119.9:0:10:-17.55:22.02
16	81765054	774339:1	C	]16:81765621]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CTCCAGCCTGGGTGACAGAGTGAGA;MAPQ=60;MATEID=774339:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_81756501_81781501_97C;SPAN=567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:53:90:77:149.6,0,77:53:0:-150.9:150.9
16	81765621	774339:2	A	A[16:81765054[	99	PASS	EVDNC=ASSMB;HOMSEQ=CTCCAGCCTGGGTGACAGAGTGAGA;MAPQ=60;MATEID=774339:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_81756501_81781501_97C;SPAN=567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:53:90:77:149.6,0,77:53:0:-150.9:150.9
16	82757477	774754:1	A	]16:82757614]A	47	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=774754:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_82736501_82761501_24C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:43:47.3:47.3,0,60.5:18:0:-47.33:47.43
16	82757614	774754:2	A	A[16:82757477[	47	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=774754:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_82736501_82761501_24C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:43:47.3:47.3,0,60.5:18:0:-47.33:47.43
16	84336396	775449:1	C	C[16:84336829[	0	PASS	EVDNC=ASSMB;HOMSEQ=GATCACGCCATTGCACTCCAGCCTGGGC;MAPQ=60;MATEID=775449:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_84329001_84354001_39C;SPAN=433;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:52:1.2:0,1.2,132:4:0:1.413:7.213
16	84336829	775449:2	G	]16:84336396]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GATCACGCCATTGCACTCCAGCCTGGGC;MAPQ=60;MATEID=775449:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_84329001_84354001_39C;SPAN=433;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:52:1.2:0,1.2,132:4:0:1.413:7.213
16	84467832	775519:1	C	C[16:84470510[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAGCTGCCCCAGGATGGACC;MAPQ=60;MATEID=775519:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_16_84451501_84476501_186C;SPAN=2678;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:36:26.3:26.3,0,62.6:10:3:-26.19:27.08
16	84470510	775519:2	C	]16:84467832]C	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAGCTGCCCCAGGATGGACC;MAPQ=60;MATEID=775519:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_16_84451501_84476501_186C;SPAN=2678;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:36:26.3:26.3,0,62.6:10:3:-26.19:27.08
16	85115938	775803:1	G	G[16:85116470[	58	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAG;MAPQ=60;MATEID=775803:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_85113001_85138001_101C;SPAN=532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:28:11.9:58.1,0,11.9:7:16:-59.83:59.83
16	85116470	775803:2	G	]16:85115938]G	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAG;MAPQ=60;MATEID=775803:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_85113001_85138001_101C;SPAN=532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:28:11.9:58.1,0,11.9:7:16:-59.83:59.83
16	85155108	775824:1	T	[16:85156196[T	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=775824:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_85137501_85162501_132C;SPAN=1088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:41:12.3:135.3,12.3,0:25:31:-135.3:135.3
16	85156196	775824:2	C	[16:85155108[C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=775824:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_85137501_85162501_132C;SPAN=1088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:41:12.3:135.3,12.3,0:25:31:-135.3:135.3
16	85268887	775861:1	G	G[16:85270785[	50	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=775861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_85260001_85285001_111C;SPAN=1898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:44:50.3:50.3,0,60.2:19:0:-50.35:50.4
16	85270785	775861:2	G	]16:85268887]G	50	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=775861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_85260001_85285001_111C;SPAN=1898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:44:50.3:50.3,0,60.2:19:0:-50.35:50.4
16	86250715	776364:1	T	T[16:86251011[	59	PASS	EVDNC=ASSMB;HOMSEQ=CTCCTGAATTCTT;MAPQ=60;MATEID=776364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_86240001_86265001_113C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66
16	86251011	776364:2	C	]16:86250715]C	59	PASS	EVDNC=ASSMB;HOMSEQ=CTCCTGAATTCTT;MAPQ=60;MATEID=776364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_86240001_86265001_113C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66
16	87502284	776954:1	C	]16:87502875]C	15	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=776954:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:87502284(-)-16:87502875(+)__16_87489501_87514501D;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:62:15.8:15.8,0,137.9:0:10:-15.58:21.45
16	87502875	776954:2	T	T[16:87502284[	15	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=776954:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:87502284(-)-16:87502875(+)__16_87489501_87514501D;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:62:15.8:15.8,0,137.9:0:10:-15.58:21.45
16	88053093	777152:1	T	]16:88053862]T	78	PASS	EVDNC=ASSMB;HOMSEQ=TAACAACCACTACCACCCCCACCTCC;MAPQ=60;MATEID=777152:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_88053001_88078001_33C;SPAN=769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:50:45.5:78.5,0,45.5:28:0:-78.78:78.78
16	88053862	777152:2	C	C[16:88053093[	78	PASS	EVDNC=ASSMB;HOMSEQ=TAACAACCACTACCACCCCCACCTCC;MAPQ=60;MATEID=777152:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_88053001_88078001_33C;SPAN=769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:50:45.5:78.5,0,45.5:28:0:-78.78:78.78
16	88079246	777183:1	C	C[16:88082061[	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=777183:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:88079246(+)-16:88082061(-)__16_88077501_88102501D;SPAN=2815;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:8:11.4:125.4,11.4,0:0:41:-125.4:125.4
16	88082061	777183:2	C	]16:88079246]C	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=777183:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:88079246(+)-16:88082061(-)__16_88077501_88102501D;SPAN=2815;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:8:11.4:125.4,11.4,0:0:41:-125.4:125.4
16	89167027	777836:1	G	]16:89259977]G	24	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=777836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_89253501_89278501_12C;SPAN=92950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
16	89259977	777836:2	T	T[16:89167027[	24	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=777836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_89253501_89278501_12C;SPAN=92950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
16	90040651	778139:1	C	C[Un_JTFH01000108v1_decoy:1[	69	PASS	EVDNC=ASSMB;HOMSEQ=GTGGGTTTCCTGTGGCC;MAPQ=60;MATEID=778139:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_90037501_90062501_109C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:19:6.3:69.3,6.3,0:23:0:-69.32:69.32
16	90040651	995643:1	C	C[Un_JTFH01000108v1_decoy:1[	79	PASS	EVDNC=ASSMB;HOMSEQ=GTGGGTTTCCTGTGGCC;INSERTION=ACCCAGCCACAGATGGCATTTTTTTTTTTGTAAATTATTTT;MAPQ=60;MATEID=995643:2;MATENM=1;NM=1;NUMPARTS=6;SCTG=c_951_1_3374_2C;SECONDARY;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:6:7.2:79.2,7.2,0:26:0:-79.22:79.22
17	494760	778350:1	G	[17:495848[G	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=778350:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_490001_515001_67C;SPAN=1088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:4:8:-22.4:22.76
17	495848	778350:2	A	[17:494760[A	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=778350:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_490001_515001_67C;SPAN=1088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:4:8:-22.4:22.76
17	497801	148404:2	T	T[2:237561091[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=148404:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_237552001_237577001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:41:21.5:21.5,0,80.9:7:6:-21.49:23.47
17	645848	778404:1	A	A[17:646775[	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACTGGAGATAGGCTCCCACACACATCTCCGTGACTGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGA;MAPQ=60;MATEID=778404:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_17_637001_662001_78C;SPAN=927;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:19:7.5:82.5,7.5,0:5:23:-82.52:82.52
17	646775	778404:2	G	]17:645848]G	82	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GACTGGAGATAGGCTCCCACACACATCTCCGTGACTGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGA;MAPQ=60;MATEID=778404:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_17_637001_662001_78C;SPAN=927;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:19:7.5:82.5,7.5,0:5:23:-82.52:82.52
17	820619	778462:1	A	A[17:821646[	46	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=GAGGCTGAGGCAGGAGAATGACGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACCCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAA;MAPQ=60;MATEID=778462:2;MATENM=5;NM=7;NUMPARTS=2;SCTG=c_17_808501_833501_85C;SPAN=1027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:2:14:-46.21:46.21
17	821646	778462:2	G	]17:820619]G	46	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGGCTGAGGCAGGAGAATGACGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACCCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAA;MAPQ=60;MATEID=778462:1;MATENM=7;NM=5;NUMPARTS=2;SCTG=c_17_808501_833501_85C;SPAN=1027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:2:14:-46.21:46.21
17	898386	778509:1	T	T[17:899018[	89	PASS	EVDNC=ASSMB;INSERTION=GGTAAAGCTCTGTCACCCAGGCTGGAGTGCAGCGC;MAPQ=58;MATEID=778509:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_17_882001_907001_3C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:13:8.1:89.1,8.1,0:29:0:-89.12:89.12
17	899018	778509:2	C	]17:898386]C	89	PASS	EVDNC=ASSMB;INSERTION=GGTAAAGCTCTGTCACCCAGGCTGGAGTGCAGCGC;MAPQ=58;MATEID=778509:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_17_882001_907001_3C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:13:8.1:89.1,8.1,0:29:0:-89.12:89.12
17	2816636	779292:1	T	T[17:2817924[	33	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=779292:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_2817501_2842501_63C;SPAN=1288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:6:3:33,3,0:11:0:-33.01:33.01
17	2817924	779292:2	C	]17:2816636]C	33	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=779292:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_2817501_2842501_63C;SPAN=1288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:6:3:33,3,0:11:0:-33.01:33.01
17	6030297	780488:1	C	C[17:6030604[	36	PASS	EVDNC=ASSMB;HOMSEQ=CAGCCATTTTC;MAPQ=60;MATEID=780488:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_6027001_6052001_69C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38
17	6030604	780488:2	C	]17:6030297]C	36	PASS	EVDNC=ASSMB;HOMSEQ=CAGCCATTTTC;MAPQ=60;MATEID=780488:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_6027001_6052001_69C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38
17	8032539	781221:1	A	]17:8232148]A	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGTC;MAPQ=60;MATEID=781221:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_8232001_8257001_59C;SPAN=199609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:7:9:-32.57:32.57
17	8232148	781221:2	T	T[17:8032539[	32	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=AGTC;MAPQ=60;MATEID=781221:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_8232001_8257001_59C;SPAN=199609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:7:9:-32.57:32.57
17	8343327	781263:1	T	T[17:8344651[	39	PASS	EVDNC=ASSMB;HOMSEQ=GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTT;MAPQ=60;MATEID=781263:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_17_8330001_8355001_52C;SPAN=1324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
17	8344651	781263:2	G	]17:8343327]G	39	PASS	EVDNC=ASSMB;HOMSEQ=GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTT;MAPQ=60;MATEID=781263:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_17_8330001_8355001_52C;SPAN=1324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
17	10235400	781898:2	T	]11:37407661]T	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=781898:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10216501_10241501_78C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:9:5:-33.01:33.01
17	10300117	781917:1	A	A[17:10300455[	13	PASS	EVDNC=ASSMB;HOMSEQ=AAGATCCTGATTCA;MAPQ=60;MATEID=781917:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10290001_10315001_20C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:58:13.4:13.4,0,132.2:9:0:-13.41:19.14
17	10300455	781917:2	A	]17:10300117]A	13	PASS	EVDNC=ASSMB;HOMSEQ=AAGATCCTGATTCA;MAPQ=60;MATEID=781917:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10290001_10315001_20C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:58:13.4:13.4,0,132.2:9:0:-13.41:19.14
17	13317181	782920:1	T	T[17:13317488[	12	PASS	EVDNC=ASSMB;HOMSEQ=AAGGGTAAAGACAGAATCTTT;MAPQ=60;MATEID=782920:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13303501_13328501_142C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
17	13317488	782920:2	A	]17:13317181]A	12	PASS	EVDNC=ASSMB;HOMSEQ=AAGGGTAAAGACAGAATCTTT;MAPQ=60;MATEID=782920:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13303501_13328501_142C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
17	13628399	783024:1	G	G[17:13629377[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGTAATCCCAGCACTTTGGGAGACTGAGGCGGG;MAPQ=60;MATEID=783024:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_13622001_13647001_14C;SPAN=978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:8:8:-46.21:46.21
17	13629377	783024:2	T	]17:13628399]T	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGTAATCCCAGCACTTTGGGAGACTGAGGCGGG;MAPQ=60;MATEID=783024:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_13622001_13647001_14C;SPAN=978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:8:8:-46.21:46.21
17	13801243	783109:1	T	T[17:13801517[	66	PASS	EVDNC=ASSMB;HOMSEQ=GCATATATGTATTCTT;MAPQ=60;MATEID=783109:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13793501_13818501_4C;SPAN=274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:12:6:66,6,0:22:0:-66.02:66.02
17	13801517	783109:2	G	]17:13801243]G	66	PASS	EVDNC=ASSMB;HOMSEQ=GCATATATGTATTCTT;MAPQ=60;MATEID=783109:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13793501_13818501_4C;SPAN=274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:12:6:66,6,0:22:0:-66.02:66.02
17	14286594	783261:1	A	A[17:14288239[	79	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=783261:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_17_14283501_14308501_0C;SPAN=1645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:15:7.2:79.2,7.2,0:26:0:-79.22:79.22
17	14288239	783261:2	A	]17:14286594]A	79	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=783261:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_17_14283501_14308501_0C;SPAN=1645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:15:7.2:79.2,7.2,0:26:0:-79.22:79.22
17	15886244	783823:1	T	T[17:15890467[	59	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=783823:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_15876001_15901001_41C;SPAN=4223;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41
17	15890467	783823:2	T	]17:15886244]T	59	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=783823:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_15876001_15901001_41C;SPAN=4223;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41
17	17252333	784312:1	C	]17:17252470]C	80	PASS	EVDNC=ASSMB;INSERTION=TACAGATAACGCTTTGGTGTGTGGGCTCTCCTGGGTA;MAPQ=60;MATEID=784312:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_17248001_17273001_6C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
17	17252470	784312:2	G	G[17:17252333[	80	PASS	EVDNC=ASSMB;INSERTION=TACAGATAACGCTTTGGTGTGTGGGCTCTCCTGGGTA;MAPQ=60;MATEID=784312:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_17248001_17273001_6C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
17	18887840	784783:1	T	T[17:18888851[	56	PASS	EVDNC=ASSMB;HOMSEQ=AACTTGTTCTTTCTT;MAPQ=60;MATEID=784783:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_18865001_18890001_110C;SPAN=1011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:16:5.1:56.1,5.1,0:19:0:-56.11:56.11
17	18888851	784783:2	A	]17:18887840]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AACTTGTTCTTTCTT;MAPQ=60;MATEID=784783:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_18865001_18890001_110C;SPAN=1011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:16:5.1:56.1,5.1,0:19:0:-56.11:56.11
17	19013598	784832:1	T	T]Un_KN707952v1_decoy:1383]	46	PASS	EVDNC=ASSMB;HOMSEQ=CATGGGGACTGTGGAGGCT;MAPQ=60;MATEID=784832:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_19012001_19037001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
17	19640120	784942:1	T	T[17:19640413[	36	PASS	EVDNC=ASSMB;HOMSEQ=AATAATAAAAATGCCT;MAPQ=60;MATEID=784942:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_19624501_19649501_32C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:45:36.8:36.8,0,76.4:15:0:-36.87:37.63
17	19640413	784942:2	A	]17:19640120]A	36	PASS	EVDNC=ASSMB;HOMSEQ=AATAATAAAAATGCCT;MAPQ=60;MATEID=784942:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_19624501_19649501_32C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:45:36.8:36.8,0,76.4:15:0:-36.87:37.63
17	19668598	784951:1	T	T[17:19669008[	62	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=784951:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_19649001_19674001_55C;SPAN=410;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
17	19669008	784951:2	T	]17:19668598]T	62	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=784951:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_19649001_19674001_55C;SPAN=410;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
17	19919536	785033:2	T	]10:132056598]T	22	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=785033:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:132056598(+)-17:19919536(-)__17_19918501_19943501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
17	21317871	785842:1	T	[17:21778359[T	42	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=T;MAPQ=36;MATEID=785842:2;MATENM=20;NM=4;NUMPARTS=2;SCTG=c_17_21756001_21781001_18C;SPAN=460488;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:12:4:-43.71:43.71
17	21427160	785785:1	A	A[17:21713088[	24	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=785785:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21427160(+)-17:21713088(-)__17_21707001_21732001D;SPAN=285928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:0:9:-24.37:24.37
17	21713088	785785:2	A	]17:21427160]A	24	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=785785:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21427160(+)-17:21713088(-)__17_21707001_21732001D;SPAN=285928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:0:9:-24.37:24.37
17	21778359	785842:2	A	[17:21317871[A	42	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=T;MAPQ=24;MATEID=785842:1;MATENM=4;NM=20;NUMPARTS=2;SCTG=c_17_21756001_21781001_18C;SPAN=460488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:12:4:-43.71:43.71
17	21814103	785911:2	N	]7:63016535]N	59	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=785911:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:63016535(+)-17:21814103(-)__17_21805001_21830001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
17	21884550	787008:1	T	T[17:21987760[	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGGAATGGAATTGAATGGAATGGAAT;MAPQ=60;MATEID=787008:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_21878501_21903501_214C;SPAN=103210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:8:6:-31.39:32.26
17	21920248	801378:1	A	A[17:26877289[	9	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=801378:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21920248(+)-17:26877289(-)__17_26876501_26901501D;SPAN=4957041;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:83:9.8:9.8,0,197.9:0:10:-9.679:20.08
17	21950588	788019:1	T	]17:21950746]T	16	PASS	EVDNC=ASSMB;HOMSEQ=TGGAATGGA;MAPQ=60;MATEID=788019:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_21927501_21952501_14C;SPAN=158;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:118:16.4:16.4,0,280.4:15:0:-16.35:30.49
17	21950746	788019:2	A	A[17:21950588[	16	PASS	EVDNC=ASSMB;HOMSEQ=TGGAATGGA;MAPQ=60;MATEID=788019:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_21927501_21952501_14C;SPAN=158;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:118:16.4:16.4,0,280.4:15:0:-16.35:30.49
17	21987760	787008:2	A	]17:21884550]A	31	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ATGGAATGGAATTGAATGGAATGGAAT;MAPQ=60;MATEID=787008:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_21878501_21903501_214C;SPAN=103210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:8:6:-31.39:32.26
17	22877406	788665:1	G	]17:23183141]G	19	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=788665:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:22877406(-)-17:23183141(+)__17_23177001_23202001D;SPAN=305735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89
17	23183141	788665:2	C	C[17:22877406[	19	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=788665:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:22877406(-)-17:23183141(+)__17_23177001_23202001D;SPAN=305735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89
17	23483975	789767:1	A	]17:23484332]A	99	PASS	DISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=AGAAGCCTTCTCAGAAA;MAPQ=13;MATEID=789767:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_23471001_23496001_74C;SPAN=357;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:12:9.9:108.9,9.9,0:30:8:-108.9:108.9
17	23484332	789767:2	A	A[17:23483975[	99	PASS	DISC_MAPQ=16;EVDNC=ASDIS;HOMSEQ=AGAAGCCTTCTCAGAAA;MAPQ=39;MATEID=789767:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_23471001_23496001_74C;SPAN=357;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:12:9.9:108.9,9.9,0:30:8:-108.9:108.9
17	24946097	793752:1	A	]17:24946925]A	26	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=793752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:24946097(-)-17:24946925(+)__17_24941001_24966001D;SPAN=828;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:6:2.4:26.4,2.4,0:0:9:-26.41:26.41
17	24946925	793752:2	T	T[17:24946097[	26	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=793752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:24946097(-)-17:24946925(+)__17_24941001_24966001D;SPAN=828;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:6:2.4:26.4,2.4,0:0:9:-26.41:26.41
17	25237545	794573:1	G	]17:26590930]G	23	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=794573:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:25237545(-)-17:26590930(+)__17_25235001_25260001D;SPAN=1353385;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
17	25539213	796561:1	A	]17:25539559]A	99	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AGCATTC;MAPQ=60;MATEID=796561:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_25872001_25897001_85C;SPAN=346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:0:11.1:122.1,11.1,0:40:0:-122.1:122.1
17	25539559	796561:2	C	C[17:25539213[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AGCATTC;MAPQ=28;MATEID=796561:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_25872001_25897001_85C;SPAN=346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:0:11.1:122.1,11.1,0:40:0:-122.1:122.1
17	25637287	795758:1	A	]17:25637632]A	99	PASS	DISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=AGCATTC;MAPQ=19;MATEID=795758:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_25627001_25652001_95C;SPAN=345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:63:80:14:185.6,0,14:60:3:-193.9:193.9
17	25637632	795758:2	C	C[17:25637287[	99	PASS	DISC_MAPQ=21;EVDNC=ASDIS;HOMSEQ=AGCATTC;MAPQ=40;MATEID=795758:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_25627001_25652001_95C;SPAN=345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:63:80:14:185.6,0,14:60:3:-193.9:193.9
17	26256377	798613:1	A	A[17:26476143[	29	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=798613:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:26256377(+)-17:26476143(-)__17_26460001_26485001D;SPAN=219766;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:3:2.7:29.7,2.7,0:0:10:-29.71:29.71
17	26476143	798613:2	G	]17:26256377]G	29	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=798613:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:26256377(+)-17:26476143(-)__17_26460001_26485001D;SPAN=219766;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:3:2.7:29.7,2.7,0:0:10:-29.71:29.71
17	26590930	794573:2	A	A[17:25237545[	23	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=794573:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:25237545(-)-17:26590930(+)__17_25235001_25260001D;SPAN=1353385;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
17	26640334	798950:1	T	T[17:26640621[	89	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTAGAATCTGCAGGTGGACATTTGGGGCGCTTTGAGGCCAATGGAGAAAAAGGAAATCTCTTCACGTAAAAGCTATACAGAAGCATTCTCAGAAACTTCTTTGTGATATGTGCATTCAACTCACAGAATTGAACATTTTTTTTCATAGAGCAGATTTGAAACACTCTGTTGAATTTGCAAGTGGATATTTGGACGGCTTAGAGGCCTTTGTTGGAAACAAGGTATCTTCACATAAAAGCTAGACAGAAGCATTCTCAGAAGCTACTTTGTGATGTGTGCATTCAACTCACAGAGTTGAACCTTTCTTTTGATAGG;MAPQ=60;MATEID=798950:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=TTTTT;SCTG=c_17_26631501_26656501_88C;SPAN=287;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:6:9:89.9,9,0:33:0:-89.99:89.99
17	26640621	798950:2	A	]17:26640334]A	89	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTAGAATCTGCAGGTGGACATTTGGGGCGCTTTGAGGCCAATGGAGAAAAAGGAAATCTCTTCACGTAAAAGCTATACAGAAGCATTCTCAGAAACTTCTTTGTGATATGTGCATTCAACTCACAGAATTGAACATTTTTTTTCATAGAGCAGATTTGAAACACTCTGTTGAATTTGCAAGTGGATATTTGGACGGCTTAGAGGCCTTTGTTGGAAACAAGGTATCTTCACATAAAAGCTAGACAGAAGCATTCTCAGAAGCTACTTTGTGATGTGTGCATTCAACTCACAGAGTTGAACCTTTCTTTTGATAGG;MAPQ=60;MATEID=798950:1;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=TTTTT;SCTG=c_17_26631501_26656501_88C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:6:9:89.9,9,0:33:0:-89.99:89.99
17	26657609	798974:1	A	A[17:26683650[	34	PASS	DISC_MAPQ=1;EVDNC=ASDIS;HOMSEQ=ACAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGCATTCAACTCACAGAGTTGAACATTTCTTTTGACAGAGAAGTTTTGAAA;MAPQ=10;MATEID=798974:2;MATENM=6;NM=8;NUMPARTS=2;SCTG=c_17_26656001_26681001_40C;SPAN=26041;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:8:4:-34.32:34.32
17	26683650	798974:2	A	]17:26657609]A	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGCATTCAACTCACAGAGTTGAACATTTCTTTTGACAGAGAAGTTTTGAAA;MAPQ=60;MATEID=798974:1;MATENM=8;NM=6;NUMPARTS=2;SCTG=c_17_26656001_26681001_40C;SPAN=26041;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:8:4:-34.32:34.32
17	26701545	798997:1	A	]17:26702093]A	50	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=ATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTG;MAPQ=60;MATEID=798997:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_26680501_26705501_20C;SPAN=548;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:9:16:-51.49:51.49
17	26702093	798997:2	G	G[17:26701545[	50	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=ATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTG;MAPQ=60;MATEID=798997:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_26680501_26705501_20C;SPAN=548;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:9:16:-51.49:51.49
17	26843013	800758:1	A	A[17:26846576[	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATGGAATGGACTCGAATGGAATGGACTGGAA;MAPQ=60;MATEID=800758:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_26827501_26852501_447C;SPAN=3563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:89:37.7:37.7,0,186.2:8:16:-37.7:43.33
17	26846576	800758:2	G	]17:26843013]G	37	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAATGGAATGGACTCGAATGGAATGGACTGGAA;MAPQ=60;MATEID=800758:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_26827501_26852501_447C;SPAN=3563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:89:37.7:37.7,0,186.2:8:16:-37.7:43.33
17	26877289	801378:2	A	]17:21920248]A	9	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=801378:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21920248(+)-17:26877289(-)__17_26876501_26901501D;SPAN=4957041;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:83:9.8:9.8,0,197.9:0:10:-9.679:20.08
17	27155352	801818:1	T	]17:27164868]T	34	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTG;MAPQ=60;MATEID=801818:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_27146001_27171001_15C;SPAN=9516;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:7:8:-34.32:34.32
17	27164868	801818:2	G	G[17:27155352[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTG;MAPQ=60;MATEID=801818:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_27146001_27171001_15C;SPAN=9516;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:7:8:-34.32:34.32
17	29271810	802159:1	C	]17:29456121]C	20	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGG;MAPQ=60;MATEID=802159:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_29449001_29474001_4C;SPAN=184311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:11:6.8:20,0,6.8:6:4:-20.32:20.32
17	29456121	802159:2	G	G[17:29271810[	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGG;MAPQ=60;MATEID=802159:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_29449001_29474001_4C;SPAN=184311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:11:6.8:20,0,6.8:6:4:-20.32:20.32
17	33736830	802912:2	G	[1:88507126[G	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=802912:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:88507126(-)-17:33736830(-)__17_33736501_33761501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51
17	33737644	802914:2	C	C]1:88507142]	52	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=802914:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_33736501_33761501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81
17	34545962	803094:1	A	A[17:34547600[	46	PASS	EVDNC=ASSMB;INSERTION=CTT;MAPQ=60;MATEID=803094:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_17_34545001_34570001_0C;SPAN=1638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21
17	34547600	803094:2	G	]17:34545962]G	46	PASS	EVDNC=ASSMB;INSERTION=CTT;MAPQ=60;MATEID=803094:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_17_34545001_34570001_0C;SPAN=1638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21
17	34977737	815353:1	G	]17:74777739]G	40	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCTTGGCCAACATGGCGAAACCCCGTCTCTACTAACAATATAAAAAAATTATCCAGGCGTGGTGGTGGGCACCTG;INSERTION=C;MAPQ=60;MATEID=815353:2;MATENM=1;NM=0;NUMPARTS=3;REPSEQ=AAA;SCTG=c_17_74774001_74799001_8C;SPAN=39800002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:11:12:-41.65:41.65
17	36446655	803455:1	A	A[17:36459258[	33	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=803455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:36446655(+)-17:36459258(-)__17_36456001_36481001D;SPAN=12603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:5:3:33,3,0:0:11:-33.01:33.01
17	36459258	803455:2	T	]17:36446655]T	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=803455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:36446655(+)-17:36459258(-)__17_36456001_36481001D;SPAN=12603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:5:3:33,3,0:0:11:-33.01:33.01
17	39616248	803979:1	A	]17:39786889]A	28	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=803979:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_39763501_39788501_24C;SPAN=170641;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
17	39729080	804185:1	C	]17:40691183]C	42	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=804185:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_40670001_40695001_8C;SPAN=962103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91
17	39786889	803979:2	G	G[17:39616248[	28	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=803979:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_39763501_39788501_24C;SPAN=170641;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
17	40691183	804185:2	T	T[17:39729080[	42	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=804185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_40670001_40695001_8C;SPAN=962103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91
17	44048921	805051:2	G	[1:188086594[G	49	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AGC;MAPQ=60;MATEID=805051:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44026501_44051501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:13:9:-49.51:49.51
17	44198003	805152:1	C	]17:44358211]C	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGTGGGG;MAPQ=60;MATEID=805152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44345001_44370001_15C;SPAN=160208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:12:5:-48.04:48.04
17	44358211	805152:2	G	G[17:44198003[	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGTGGGG;MAPQ=60;MATEID=805152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44345001_44370001_15C;SPAN=160208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:12:5:-48.04:48.04
17	45488644	934007:1	T	]X:68328802]T	52	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=934007:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:45488644(-)-23:68328802(+)__23_68306001_68331001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81
17	47670040	805985:1	A	]20:53866284]A	23	PASS	EVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=805985:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_47652501_47677501_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
17	48538270	806286:1	G	]17:48539858]G	85	PASS	DISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=GGA;MAPQ=60;MATEID=806286:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_48534501_48559501_6C;SPAN=1588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:36:3.2:85.7,0,3.2:17:17:-89.88:89.88
17	48538441	806287:1	G	G[17:48539859[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=806287:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_48534501_48559501_8C;SPAN=1418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:37:10.2:112.2,10.2,0:37:0:-112.2:112.2
17	48539858	806286:2	A	A[17:48538270[	85	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGA;MAPQ=60;MATEID=806286:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_48534501_48559501_6C;SPAN=1588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:36:3.2:85.7,0,3.2:17:17:-89.88:89.88
17	48539859	806287:2	A	]17:48538441]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=806287:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_48534501_48559501_8C;SPAN=1418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:37:10.2:112.2,10.2,0:37:0:-112.2:112.2
17	48813086	887898:1	A	[20:59473634[A	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=887898:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_31C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:48:13.1:13.1,0,105.5:4:6:-12.92:17.28
17	49274477	806552:1	A	A[17:49275757[	18	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=806552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:49274477(+)-17:49275757(-)__17_49269501_49294501D;SPAN=1280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
17	49275757	806552:2	T	]17:49274477]T	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=806552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:49274477(+)-17:49275757(-)__17_49269501_49294501D;SPAN=1280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
17	50673981	930954:1	T	T]X:46827692]	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT;MAPQ=60;MATEID=930954:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_46819501_46844501_18C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:3:7:-29.71:29.71
17	50783035	807096:1	C	]17:51292796]C	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=807096:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_12C;SPAN=509761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:9:9:-32.3:32.3
17	51221496	807098:1	C	]17:51300764]C	50	PASS	EVDNC=ASSMB;HOMSEQ=CAAA;MAPQ=60;MATEID=807098:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_97C;SPAN=79268;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:17:0:-52.77:52.77
17	51292796	807096:2	C	C[17:50783035[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=807096:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_12C;SPAN=509761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:9:9:-32.3:32.3
17	51300764	807098:2	A	A[17:51221496[	50	PASS	EVDNC=ASSMB;HOMSEQ=CAAA;MAPQ=60;MATEID=807098:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_97C;SPAN=79268;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:17:0:-52.77:52.77
17	51419125	807186:1	A	]17:51459549]A	31	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=807186:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_51450001_51475001_71C;SPAN=40424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
17	51459549	807186:2	C	C[17:51419125[	31	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=807186:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_51450001_51475001_71C;SPAN=40424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
17	52598598	995132:1	A	]Un_JTFH01000033v1_decoy:5897]A	95	PASS	EVDNC=ASSMB;HOMSEQ=AGGC;MAPQ=60;MATEID=995132:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_876_1_5898_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:9:8.7:95.7,8.7,0:32:0:-95.72:95.72
17	52598606	807511:1	G	G]X:49142499]	29	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=807511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:52598606(+)-23:49142499(+)__17_52577001_52602001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3
17	53110849	807783:1	C	C[17:53111170[	18	PASS	EVDNC=ASSMB;INSERTION=ATAATTATGAT;MAPQ=60;MATEID=807783:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_53091501_53116501_23C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76
17	53111170	807783:2	T	]17:53110849]T	18	PASS	EVDNC=ASSMB;INSERTION=ATAATTATGAT;MAPQ=60;MATEID=807783:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_53091501_53116501_23C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76
17	53111341	807773:2	T	[16:6222194[T	55	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=807773:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_53091501_53116501_47C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:26:9.2:55.4,0,9.2:14:8:-57.2:57.2
17	53112039	750485:2	T	T]16:6221570]	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=750485:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:6221570(+)-17:53112039(+)__16_6198501_6223501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29
17	53662312	807970:1	A	]17:53672240]A	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAC;MAPQ=60;MATEID=807970:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_53655001_53680001_42C;SPAN=9928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:7:5:-13.76:17.53
17	53672240	807970:2	A	A[17:53662312[	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAC;MAPQ=60;MATEID=807970:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_53655001_53680001_42C;SPAN=9928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:7:5:-13.76:17.53
17	54452322	808244:1	G	G[17:54455866[	85	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=808244:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_54439001_54464001_1C;SPAN=3544;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:23:7.8:85.8,7.8,0:28:0:-85.82:85.82
17	54455866	808244:2	A	]17:54452322]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=808244:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_54439001_54464001_1C;SPAN=3544;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:23:7.8:85.8,7.8,0:28:0:-85.82:85.82
17	55763133	916311:1	G	G[22:28669793[	73	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=ACTAAGCAAATTATTTAAAATAATAATTTTAAAATAAAATGACTAAGCAAATTATTTAAAATAATAATTTGCTTAGTCATTTATTCA;MAPQ=60;MATEID=916311:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_22_28665001_28690001_87C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:138:73.7:73.7,0,271.7:34:5:-73.44:79.95
17	55763576	916313:1	C	]22:28669943]C	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916313:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:55763576(-)-22:28669943(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:71:26.3:26.3,0,151.7:0:14:-26.26:31.38
17	56544115	808859:1	T	]17:56662442]T	22	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=808859:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:56544115(-)-17:56662442(+)__17_56521501_56546501D;SPAN=118327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
17	56662442	808859:2	G	G[17:56544115[	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=808859:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:56544115(-)-17:56662442(+)__17_56521501_56546501D;SPAN=118327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
17	57501629	809228:2	A	]14:64280468]A	21	PASS	EVDNC=ASSMB;INSERTION=AGAACTTGTTTTATTCACCTCATCCC;MAPQ=60;MATEID=809228:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_57501501_57526501_45C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11
17	57501774	462287:2	A	A]8:90572448]	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=462287:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_90552001_90577001_44C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:7:7:-29.85:29.85
17	57610549	809267:1	G	G[17:57612553[	89	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=809267:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:57610549(+)-17:57612553(-)__17_57599501_57624501D;SPAN=2004;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:7:8.1:89.1,8.1,0:0:29:-89.12:89.12
17	57612553	809267:2	C	]17:57610549]C	89	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=809267:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:57610549(+)-17:57612553(-)__17_57599501_57624501D;SPAN=2004;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:7:8.1:89.1,8.1,0:0:29:-89.12:89.12
17	58558972	809610:2	C	[3:61619502[C	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=809610:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58555001_58580001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:99:40:27.6:303.6,27.6,0:43:68:-303.7:303.7
17	58608924	809639:2	A	[3:61639528[A	0	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=809639:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_58604001_58629001_60C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:106:0.2:0.2,0,264.2:3:7:0.08672:16.63
17	58625792	881140:1	G	[20:42374557[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=881140:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42360501_42385501_15C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:34:13.5:148.5,13.5,0:31:28:-148.5:148.5
17	58626292	809653:1	G	G[17:58626590[	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAGCCTCCTGGCTGGGTG;MAPQ=60;MATEID=809653:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58604001_58629001_107C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:171:31.3:0,31.3,491.8:5:0:31.56:6.879
17	58626590	809653:2	A	]17:58626292]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAGCCTCCTGGCTGGGTG;MAPQ=60;MATEID=809653:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58604001_58629001_107C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:171:31.3:0,31.3,491.8:5:0:31.56:6.879
17	58731201	809737:2	T	T[3:63976823[	38	PASS	EVDNC=ASSMB;HOMSEQ=ACCT;MAPQ=60;MATEID=809737:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_58726501_58751501_107C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:88:38:38,0,183.2:19:0:-37.98:43.43
17	58962856	809881:2	G	[1:111822912[G	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=809881:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58947001_58972001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:50:105:99:135.5,0,128.9:34:28:-135.5:135.5
17	59122425	809904:1	A	A[17:59829566[	99	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=809904:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_59118501_59143501_43C;SPAN=707141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:58:88:54.5:166.7,0,54.5:58:0:-169.8:169.8
17	59286635	809997:1	C	C[17:59288345[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=809997:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:59286635(+)-17:59288345(-)__17_59265501_59290501D;SPAN=1710;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:0:16:-48.1:48.1
17	59288345	809997:2	A	]17:59286635]A	46	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=809997:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:59286635(+)-17:59288345(-)__17_59265501_59290501D;SPAN=1710;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:0:16:-48.1:48.1
17	59829566	809904:2	A	]17:59122425]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=809904:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_59118501_59143501_43C;SPAN=707141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:58:88:54.5:166.7,0,54.5:58:0:-169.8:169.8
17	59896324	630789:2	G	G[12:61805169[	17	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=630789:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_61789001_61814001_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
17	60735668	27442:2	T	[1:113813812[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=27442:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113802501_113827501_57C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:87:97.7:120.8,0,97.7:23:34:-120.9:120.9
17	60756794	24645:2	T	]1:106260694]T	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=24645:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106256501_106281501_135C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:87:1.2:0,1.2,221.1:5:2:1.348:12.76
17	60802106	810346:2	G	G[3:63718451[	99	PASS	EVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=810346:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_60784501_60809501_53C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:51:80:53.6:146,0,53.6:51:0:-148.1:148.1
17	61210341	888229:1	C	[20:60270342[C	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TGTG;MAPQ=60;MATEID=888229:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60270001_60295001_15C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:97:155:99:276.8,0,111.8:59:56:-280.3:280.3
17	61398559	884135:1	G	[20:50110068[G	17	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=884135:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_50102501_50127501_30C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:4:6:-16.85:18.63
17	61570856	414626:2	T	T[7:94308706[	24	PASS	EVDNC=ASSMB;INSERTION=GACTTGCTCT;MAPQ=60;MATEID=414626:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_94300501_94325501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
17	61814571	25023:2	C	[1:106982020[C	37	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=25023:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106967001_106992001_105C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:68:37.1:37.1,0,132.8:15:5:-37:40.1
17	61909172	886070:1	C	C[20:55576908[	99	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=886070:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_55566001_55591001_71C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:167:99:151.4,0,266.9:60:0:-151.1:152.9
17	61924313	882804:1	C	]20:47143282]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=882804:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:119:99:118.4,0,181.1:46:0:-118.4:119.1
17	61924536	882806:1	A	A[20:47149699[	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=882806:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_44C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:88:79:24.6:270.6,24.6,0:20:79:-270.7:270.7
17	62000916	882808:1	C	]20:47150452]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CCA;MAPQ=56;MATEID=882808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:62:129:99:168.5,0,155.3:62:0:-168.4:168.4
17	62017132	886073:1	T	[20:55584209[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TCAA;MAPQ=60;MATEID=886073:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_55566001_55591001_45C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:74:124:99:209.6,0,100.7:41:53:-211.4:211.4
17	62018502	810629:1	C	C[17:62110864[	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=810629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62107501_62132501_14C;SPAN=92362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:62:179:99:154.4,0,296.3:62:0:-154.3:156.8
17	62110864	810629:2	C	]17:62018502]C	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=810629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62107501_62132501_14C;SPAN=92362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:62:179:99:154.4,0,296.3:62:0:-154.3:156.8
17	62135637	811105:1	G	[17:62961840[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=811105:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62940501_62965501_5C;SPAN=826203;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:104:168:99:296.3,0,124.7:69:73:-299.8:299.8
17	62660892	810968:1	A	A]20:61529111]	60	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=810968:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:62660892(+)-20:61529111(+)__17_62646501_62671501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:32:17.6:60.5,0,17.6:0:21:-61.42:61.42
17	62812070	889980:1	T	]20:63870915]T	12	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GTGTG;MAPQ=60;MATEID=889980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63847001_63872001_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:14:12.5:12.5,0,22.4:2:4:-12.57:12.73
17	62961840	811105:2	C	[17:62135637[C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=811105:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62940501_62965501_5C;SPAN=826203;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:104:168:99:296.3,0,124.7:69:73:-299.8:299.8
17	62965942	886924:1	C	C[20:57100409[	99	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=886924:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_57085001_57110001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:48:156:99:114.8,0,276.5:48:0:-114.6:118.4
17	63001506	889876:1	T	[20:63664882[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=889876:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63651001_63676001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:52:64:5.3:153.8,0,5.3:36:18:-161.6:161.6
17	63002553	882810:1	A	A[20:47156833[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=882810:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_67C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:71:137:99:196.1,0,146.6:71:0:-196.2:196.2
17	63093446	811194:1	G	G]17:63101678]	50	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=811194:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63093446(+)-17:63101678(+)__17_63087501_63112501D;SPAN=8232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:80:50.3:50.3,0,149.3:0:22:-50.14:52.96
17	63101678	811194:2	A	A]17:63093446]	50	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=811194:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63093446(+)-17:63101678(+)__17_63087501_63112501D;SPAN=8232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:80:50.3:50.3,0,149.3:0:22:-50.14:52.96
17	63842219	811520:1	C	]17:63878730]C	36	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=60;MATEID=811520:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_63871501_63896501_153C;SPAN=36511;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:35:36.5:36.5,0,49.7:11:12:-36.38:36.52
17	63863783	811504:1	G	G[17:63887370[	15	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=811504:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63863783(+)-17:63887370(-)__17_63847001_63872001D;SPAN=23587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:0:8:-15.73:18.19
17	63878730	811520:2	G	G[17:63842219[	36	PASS	DISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=27;MATEID=811520:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_63871501_63896501_153C;SPAN=36511;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:35:36.5:36.5,0,49.7:11:12:-36.38:36.52
17	63887370	811504:2	C	]17:63863783]C	15	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=811504:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63863783(+)-17:63887370(-)__17_63847001_63872001D;SPAN=23587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:0:8:-15.73:18.19
17	64135849	811613:1	C	C[17:64136778[	95	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCC;MAPQ=60;MATEID=811613:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_64116501_64141501_14C;SPAN=929;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:16:8.7:95.7,8.7,0:15:21:-95.72:95.72
17	64136778	811613:2	G	]17:64135849]G	95	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCC;MAPQ=60;MATEID=811613:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_64116501_64141501_14C;SPAN=929;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:16:8.7:95.7,8.7,0:15:21:-95.72:95.72
17	64310797	811695:1	G	]20:54940897]G	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CAACAAATGTTTATTGAGTTTATACTATAAACCTTCTCCTCTTTCCTTTGCTGACTCTCTGCCTGGAACT;MAPQ=60;MATEID=811695:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_64288001_64313001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:118:103:33:363,33,0:118:0:-363.1:363.1
17	65276006	811993:1	T	T[17:65276255[	66	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GCCTCGGCCTCCCAAAGTGCTGGGATTACCGGCATGAGCCACCGCACCCGGCCTATAGCAGCATTATTCTT;MAPQ=60;MATEID=811993:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_65268001_65293001_24C;SPAN=249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:12:13:-66.02:66.02
17	65276255	811993:2	G	]17:65276006]G	66	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTCGGCCTCCCAAAGTGCTGGGATTACCGGCATGAGCCACCGCACCCGGCCTATAGCAGCATTATTCTT;MAPQ=60;MATEID=811993:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_65268001_65293001_24C;SPAN=249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:12:13:-66.02:66.02
17	65499944	812061:1	G	]17:65500418]G	35	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=812061:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:65499944(-)-17:65500418(+)__17_65488501_65513501D;SPAN=474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:62:35.6:35.6,0,118.1:0:16:-35.39:38
17	65500418	812061:2	A	A[17:65499944[	35	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=812061:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:65499944(-)-17:65500418(+)__17_65488501_65513501D;SPAN=474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:62:35.6:35.6,0,118.1:0:16:-35.39:38
17	66203075	812369:1	A	]17:66215365]A	19	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=812369:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_66199001_66224001_105C;SPAN=12290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:8:7:-19.52:22.68
17	66215365	812369:2	A	A[17:66203075[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=812369:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_66199001_66224001_105C;SPAN=12290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:8:7:-19.52:22.68
17	66268939	812410:1	G	G[17:66269997[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATGTTTTAAG;MAPQ=60;MATEID=812410:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_66248001_66273001_0C;SPAN=1058;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:36:6.6:102.3,6.6,0:32:0:-102.8:102.8
17	66269997	812410:2	A	]17:66268939]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATGTTTTAAG;MAPQ=60;MATEID=812410:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_66248001_66273001_0C;SPAN=1058;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:36:6.6:102.3,6.6,0:32:0:-102.8:102.8
17	66641155	812584:2	T	]6:13191316]T	40	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=812584:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:13191316(+)-17:66641155(-)__17_66640001_66665001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:0:15:-39.96:39.98
17	68005944	813236:2	G	G[16:24412394[	49	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=813236:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:24412394(-)-17:68005944(+)__17_67987501_68012501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
17	69091525	813744:1	T	T[17:69091822[	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAAATAGACTTCTT;MAPQ=60;MATEID=813744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_69090001_69115001_19C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:43:5.4:118.8,5.4,0:38:0:-121.8:121.8
17	69091822	813744:2	C	]17:69091525]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAAATAGACTTCTT;MAPQ=60;MATEID=813744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_69090001_69115001_19C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:43:5.4:118.8,5.4,0:38:0:-121.8:121.8
17	69309485	887352:1	A	]20:58273305]A	15	PASS	EVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=887352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58261001_58286001_61C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78
17	69341591	813847:1	C	C]17:75821480]	62	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=813847:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:69341591(+)-17:75821480(+)__17_69335001_69360001D;SPAN=6479889;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:16:5.7:62.7,5.7,0:0:21:-62.72:62.72
17	72085980	814650:1	G	]17:72298446]G	75	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=41;MATEID=814650:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72275001_72300001_17C;SPAN=212466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:25:6.9:75.9,6.9,0:9:24:-75.92:75.92
17	72298446	814650:2	G	G[17:72085980[	75	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=814650:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72275001_72300001_17C;SPAN=212466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:25:6.9:75.9,6.9,0:9:24:-75.92:75.92
17	72685322	814760:1	T	]17:72685450]T	82	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=814760:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72667001_72692001_1C;SPAN=128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:49:39.2:82.1,0,39.2:29:0:-82.67:82.67
17	72685450	814760:2	T	T[17:72685322[	82	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=814760:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72667001_72692001_1C;SPAN=128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:49:39.2:82.1,0,39.2:29:0:-82.67:82.67
17	72701864	814770:1	G	]17:72702013]G	43	PASS	EVDNC=ASSMB;HOMSEQ=GCTGAGGTGG;MAPQ=60;MATEID=814770:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_72691501_72716501_15C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:35:43.1:43.1,0,43.1:16:0:-42.98:42.98
17	72702013	814770:2	G	G[17:72701864[	43	PASS	EVDNC=ASSMB;HOMSEQ=GCTGAGGTGG;MAPQ=60;MATEID=814770:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_72691501_72716501_15C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:35:43.1:43.1,0,43.1:16:0:-42.98:42.98
17	72819091	814807:1	C	C[17:72825222[	56	PASS	EVDNC=ASSMB;HOMSEQ=TCC;MAPQ=60;MATEID=814807:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_17_72814001_72839001_4C;SPAN=6131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
17	72825222	814807:2	T	]17:72819091]T	56	PASS	EVDNC=ASSMB;HOMSEQ=TCC;MAPQ=60;MATEID=814807:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_17_72814001_72839001_4C;SPAN=6131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
17	72880967	814830:1	C	C[Un_KN707893v1_decoy:1[	49	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=814830:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72863001_72888001_3C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:15:0:-48.04:48.04
17	72880967	991392:1	C	C[Un_KN707893v1_decoy:1[	52	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=991392:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=CC;SCTG=c_744_1_8049_5C;SPAN=-1;SUBN=9;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:6:4.8:52.8,4.8,0:18:0:-52.81:52.81
17	74777739	815353:2	G	G[17:34977737[	40	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCTTGGCCAACATGGCGAAACCCCGTCTCTACTAACAATATAAAAAAATTATCCAGGCGTGGTGGTGGGCACCTG;INSERTION=C;MAPQ=25;MATEID=815353:1;MATENM=0;NM=1;NUMPARTS=3;REPSEQ=AAA;SCTG=c_17_74774001_74799001_8C;SPAN=39800002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:11:12:-41.65:41.65
17	75259894	815709:1	A	]17:75528391]A	26	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=815709:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75509001_75534001_14C;SPAN=268497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
17	75280201	885044:1	T	]20:52003779]T	61	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=885044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51989001_52014001_51C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62
17	75431293	815914:1	G	]17:76013043]G	38	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC;MAPQ=60;MATEID=815914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75999001_76024001_11C;SPAN=581750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:12:5:-39.01:39.01
17	75514279	815782:1	A	]17:75693640]A	23	PASS	EVDNC=ASSMB;INSERTION=ATTTCCT;MAPQ=60;MATEID=815782:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75680501_75705501_62C;SPAN=179361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
17	75528391	815709:2	A	A[17:75259894[	26	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=815709:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75509001_75534001_14C;SPAN=268497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
17	75693640	815782:2	C	C[17:75514279[	23	PASS	EVDNC=ASSMB;INSERTION=ATTTCCT;MAPQ=60;MATEID=815782:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75680501_75705501_62C;SPAN=179361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
17	75821480	813847:2	C	C]17:69341591]	62	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=813847:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:69341591(+)-17:75821480(+)__17_69335001_69360001D;SPAN=6479889;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:16:5.7:62.7,5.7,0:0:21:-62.72:62.72
17	76013043	815914:2	C	C[17:75431293[	38	PASS	DISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC;MAPQ=28;MATEID=815914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75999001_76024001_11C;SPAN=581750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:12:5:-39.01:39.01
17	78861205	816744:1	C	]17:78878251]C	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCC;MAPQ=60;MATEID=816744:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_78841001_78866001_7C;SPAN=17046;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:3:10:-31.6:31.6
17	78878251	816744:2	C	C[17:78861205[	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCC;MAPQ=60;MATEID=816744:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_78841001_78866001_7C;SPAN=17046;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:3:10:-31.6:31.6
17	79555272	816912:1	T	]17:79555909]T	50	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=816912:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:79555272(-)-17:79555909(+)__17_79551501_79576501D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33
17	79555909	816912:2	T	T[17:79555272[	50	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=816912:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:79555272(-)-17:79555909(+)__17_79551501_79576501D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33
17	80024303	817074:1	C	]17:80024763]C	54	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=817074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:80024303(-)-17:80024763(+)__17_80017001_80042001D;SPAN=460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:40:44.9:54.8,0,44.9:0:20:-54.82:54.82
17	80024763	817074:2	A	A[17:80024303[	54	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=817074:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:80024303(-)-17:80024763(+)__17_80017001_80042001D;SPAN=460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:40:44.9:54.8,0,44.9:0:20:-54.82:54.82
17	80488068	817257:1	G	G[17:80489964[	49	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGTGGAGGGGAGGGACGCGGTGGAG;MAPQ=60;MATEID=817257:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_80482501_80507501_16C;SECONDARY;SPAN=1896;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:4:4.5:49.5,4.5,0:3:14:-49.51:49.51
17	80489964	817257:2	G	]17:80488068]G	49	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GGTGGAGGGGAGGGACGCGGTGGAG;MAPQ=60;MATEID=817257:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_80482501_80507501_16C;SECONDARY;SPAN=1896;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:4:4.5:49.5,4.5,0:3:14:-49.51:49.51
17	80497949	817261:1	T	]17:80498108]T	21	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTGTTGTGTGTATATGTGAGTGTG;MAPQ=56;MATEID=817261:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_17_80482501_80507501_4C;SPAN=159;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:65:21.5:21.5,0,140.3:12:0:-21.34:26.51
17	80498108	817261:2	G	G[17:80497949[	21	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTGTTGTGTGTATATGTGAGTGTG;MAPQ=60;MATEID=817261:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_17_80482501_80507501_4C;SPAN=159;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:65:21.5:21.5,0,140.3:12:0:-21.34:26.51
18	3211874	819499:1	A	]18:3280177]A	53	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=819499:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_3258501_3283501_0C;SPAN=68303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
18	3280177	819499:2	A	A[18:3211874[	53	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=819499:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_3258501_3283501_0C;SPAN=68303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
18	6317356	12977:2	A	A[1:53952995[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_190C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:52:15.2:15.2,0,114.2:6:3:-15.09:19.61
18	6432597	820234:2	A	[14:47694624[A	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=820234:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_6419001_6444001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:11:5:-46.21:46.21
18	6432646	820233:2	T	T]14:47514459]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820233:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47514459(+)-18:6432646(+)__18_6419001_6444001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
18	6914999	820340:1	A	]18:6923688]A	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820340:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:6914999(-)-18:6923688(+)__18_6909001_6934001D;SPAN=8689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
18	6923688	820340:2	T	T[18:6914999[	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820340:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:6914999(-)-18:6923688(+)__18_6909001_6934001D;SPAN=8689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
18	8888408	820893:1	T	T[18:9170010[	22	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=820893:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888408(+)-18:9170010(-)__18_9163001_9188001D;SPAN=281602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76
18	8888538	820894:1	A	]18:9170224]A	42	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=820894:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888538(-)-18:9170224(+)__18_9163001_9188001D;SPAN=281686;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:0:14:-43.71:43.71
18	9170010	820893:2	T	]18:8888408]T	22	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=820893:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888408(+)-18:9170010(-)__18_9163001_9188001D;SPAN=281602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76
18	9170224	820894:2	G	G[18:8888538[	42	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=820894:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888538(-)-18:9170224(+)__18_9163001_9188001D;SPAN=281686;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:0:14:-43.71:43.71
18	12202407	69895:2	A	]2:6658148]A	28	PASS	DISC_MAPQ=13;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=69895:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:6658148(+)-18:12202407(-)__2_6639501_6664501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
18	14406760	822300:2	G	G]13:18652931]	20	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=822300:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:18652931(+)-18:14406760(+)__18_14406001_14431001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
18	14641277	822415:1	T	]18:14641411]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TCTCCCGCTTGCCGCCCTCTTTTCCCC;MAPQ=42;MATEID=822415:2;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_18_14626501_14651501_25C;SPAN=134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
18	14641411	822415:2	C	C[18:14641277[	29	PASS	EVDNC=ASSMB;HOMSEQ=TCTCCCGCTTGCCGCCCTCTTTTCCCC;MAPQ=60;MATEID=822415:1;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_18_14626501_14651501_25C;SPAN=134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
18	15388488	822796:1	G	G[18:15389964[	89	PASS	DISC_MAPQ=10;EVDNC=ASDIS;HOMSEQ=GAGCAGCTTTGAAACACTTTTTTTGTAGAATCTGCAAGTGGACATTTGGAGCACTTTGAG;MAPQ=60;MATEID=822796:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_18_15386001_15411001_113C;SPAN=1476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:48:29.6:89,0,29.6:17:19:-90.3:90.3
18	15389964	822796:2	G	]18:15388488]G	89	PASS	DISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=GAGCAGCTTTGAAACACTTTTTTTGTAGAATCTGCAAGTGGACATTTGGAGCACTTTGAG;MAPQ=60;MATEID=822796:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_18_15386001_15411001_113C;SPAN=1476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:48:29.6:89,0,29.6:17:19:-90.3:90.3
18	15472242	822965:1	G	]18:15610395]G	39	PASS	DISC_MAPQ=13;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=822965:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15472242(-)-18:15610395(+)__18_15606501_15631501D;SPAN=138153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61
18	15473014	823058:1	C	C[18:15699547[	26	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=823058:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15473014(+)-18:15699547(-)__18_15680001_15705001D;SPAN=226533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09
18	15484866	823029:1	C	C[18:15670595[	38	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=823029:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15484866(+)-18:15670595(-)__18_15655501_15680501D;SPAN=185729;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
18	15512491	822922:1	A	A[18:15572260[	26	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=822922:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15512491(+)-18:15572260(-)__18_15557501_15582501D;SPAN=59769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
18	15572260	822922:2	T	]18:15512491]T	26	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=822922:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15512491(+)-18:15572260(-)__18_15557501_15582501D;SPAN=59769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
18	15573653	823140:1	T	T[18:15770472[	99	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=823140:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573653(+)-18:15770472(-)__18_15753501_15778501D;SPAN=196819;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
18	15573782	823142:1	C	]18:15772299]C	26	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=823142:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573782(-)-18:15772299(+)__18_15753501_15778501D;SPAN=198517;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	15577908	822942:1	G	G[18:15776457[	64	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=822942:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15577908(+)-18:15776457(-)__18_15557501_15582501D;SPAN=198549;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:0:22:-67.65:67.65
18	15582223	822954:1	T	]18:15743887]T	39	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=822954:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15582223(-)-18:15743887(+)__18_15582001_15607001D;SPAN=161664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41
18	15593264	823146:1	G	G[18:15757733[	25	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=823146:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15593264(+)-18:15757733(-)__18_15753501_15778501D;SPAN=164469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99
18	15598663	822950:2	G	]9:65079191]G	23	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=822950:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:65079191(+)-18:15598663(-)__18_15582001_15607001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
18	15610395	822965:2	T	T[18:15472242[	39	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=822965:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15472242(-)-18:15610395(+)__18_15606501_15631501D;SPAN=138153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61
18	15670595	823029:2	C	]18:15484866]C	38	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=823029:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15484866(+)-18:15670595(-)__18_15655501_15680501D;SPAN=185729;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
18	15691965	823077:1	A	A[18:20640424[	99	PASS	DISC_MAPQ=36;EVDNC=ASDIS;INSERTION=TCCCTCTTTTTATAGAATTTAAAACTGGATATATGGATAGCTCTAACTATTTCTTTATAAACGTT;MAPQ=60;MATEID=823077:2;MATENM=6;NM=5;NUMPARTS=2;SCTG=c_18_15680001_15705001_713C;SPAN=4948459;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:8:9:99,9,0:30:5:-99.02:99.02
18	15699547	823058:2	T	]18:15473014]T	26	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=823058:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15473014(+)-18:15699547(-)__18_15680001_15705001D;SPAN=226533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09
18	15730131	823155:1	A	]18:15755215]A	69	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=823155:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15730131(-)-18:15755215(+)__18_15753501_15778501D;SPAN=25084;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:10:6.3:69.3,6.3,0:0:23:-69.32:69.32
18	15743887	822954:2	A	A[18:15582223[	39	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=822954:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15582223(-)-18:15743887(+)__18_15582001_15607001D;SPAN=161664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41
18	15745704	823815:1	T	T[18:20611478[	36	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=823815:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15745704(+)-18:20611478(-)__18_20604501_20629501D;SPAN=4865774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31
18	15754745	823161:1	T	]18:20640702]T	36	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=823161:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15754745(-)-18:20640702(+)__18_15753501_15778501D;SPAN=4885957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31
18	15755215	823155:2	T	T[18:15730131[	69	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=823155:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15730131(-)-18:15755215(+)__18_15753501_15778501D;SPAN=25084;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:10:6.3:69.3,6.3,0:0:23:-69.32:69.32
18	15757733	823146:2	A	]18:15593264]A	25	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=823146:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15593264(+)-18:15757733(-)__18_15753501_15778501D;SPAN=164469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99
18	15770472	823140:2	T	]18:15573653]T	99	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=823140:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573653(+)-18:15770472(-)__18_15753501_15778501D;SPAN=196819;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
18	15772299	823142:2	C	C[18:15573782[	26	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=823142:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573782(-)-18:15772299(+)__18_15753501_15778501D;SPAN=198517;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	15776457	822942:2	C	]18:15577908]C	64	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=822942:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15577908(+)-18:15776457(-)__18_15557501_15582501D;SPAN=198549;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:0:22:-67.65:67.65
18	15837315	823280:1	T	]18:16263138]T	28	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=823280:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15837315(-)-18:16263138(+)__18_16243501_16268501D;SPAN=425823;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
18	16263138	823280:2	A	A[18:15837315[	28	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=823280:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15837315(-)-18:16263138(+)__18_16243501_16268501D;SPAN=425823;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
18	17538975	823381:1	T	]18:18038741]T	59	PASS	DISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=TGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTA;MAPQ=54;MATEID=823381:2;MATENM=1;NM=0;NUMPARTS=2;REPSEQ=TGTG;SCTG=c_18_17517501_17542501_323C;SECONDARY;SPAN=499766;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:14:5.4:59.4,5.4,0:6:14:-59.41:59.41
18	17816419	823778:1	G	[18:20561646[G	33	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=823778:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:17816419(-)-18:20561646(-)__18_20555501_20580501D;SPAN=2745227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:0:11:-33.01:33.01
18	18038741	823381:2	A	A[18:17538975[	59	PASS	DISC_MAPQ=24;EVDNC=ASDIS;HOMSEQ=TGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTA;MAPQ=0;MATEID=823381:1;MATENM=0;NM=1;NUMPARTS=2;REPSEQ=TGTG;SCTG=c_18_17517501_17542501_323C;SECONDARY;SPAN=499766;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:14:5.4:59.4,5.4,0:6:14:-59.41:59.41
18	20066116	823754:1	T	T[18:20469675[	26	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=823754:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20066116(+)-18:20469675(-)__18_20457501_20482501D;SPAN=403559;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	20469675	823754:2	T	]18:20066116]T	26	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=823754:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20066116(+)-18:20469675(-)__18_20457501_20482501D;SPAN=403559;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	20561646	823778:2	T	[18:17816419[T	33	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=823778:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:17816419(-)-18:20561646(-)__18_20555501_20580501D;SPAN=2745227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:0:11:-33.01:33.01
18	20578751	823792:1	A	A]18:20635880]	41	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=823792:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20578751(+)-18:20635880(+)__18_20555501_20580501D;SPAN=57129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:51:41.9:41.9,0,84.8:0:17:-41.78:42.64
18	20611478	823815:2	T	]18:15745704]T	36	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=823815:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15745704(+)-18:20611478(-)__18_20604501_20629501D;SPAN=4865774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31
18	20611776	823816:1	T	T[18:20631100[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=823816:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20611776(+)-18:20631100(-)__18_20604501_20629501D;SPAN=19324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	20631100	823816:2	A	]18:20611776]A	26	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=823816:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20611776(+)-18:20631100(-)__18_20604501_20629501D;SPAN=19324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	20631485	823837:1	T	T[18:20635484[	46	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=823837:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20631485(+)-18:20635484(-)__18_20629001_20654001D;SPAN=3999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21
18	20635484	823837:2	A	]18:20631485]A	46	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=823837:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20631485(+)-18:20635484(-)__18_20629001_20654001D;SPAN=3999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21
18	20635880	823792:2	T	T]18:20578751]	41	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=823792:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20578751(+)-18:20635880(+)__18_20555501_20580501D;SPAN=57129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:51:41.9:41.9,0,84.8:0:17:-41.78:42.64
18	20640424	823077:2	A	]18:15691965]A	99	PASS	DISC_MAPQ=29;EVDNC=ASDIS;INSERTION=TCCCTCTTTTTATAGAATTTAAAACTGGATATATGGATAGCTCTAACTATTTCTTTATAAACGTT;MAPQ=60;MATEID=823077:1;MATENM=5;NM=6;NUMPARTS=2;SCTG=c_18_15680001_15705001_713C;SPAN=4948459;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:8:9:99,9,0:30:5:-99.02:99.02
18	20640702	823161:2	C	C[18:15754745[	36	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=823161:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15754745(-)-18:20640702(+)__18_15753501_15778501D;SPAN=4885957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31
18	20711508	823940:1	T	]18:20721332]T	52	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=823940:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20711508(-)-18:20721332(+)__18_20702501_20727501D;SPAN=9824;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:0:21:-51.89:52.86
18	20711878	823986:1	C	C[18:20735628[	66	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=823986:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20711878(+)-18:20735628(-)__18_20727001_20752001D;SPAN=23750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:15:6:66,6,0:0:22:-66.02:66.02
18	20721332	823940:2	G	G[18:20711508[	52	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=823940:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20711508(-)-18:20721332(+)__18_20702501_20727501D;SPAN=9824;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:0:21:-51.89:52.86
18	20735628	823986:2	T	]18:20711878]T	66	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=823986:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20711878(+)-18:20735628(-)__18_20727001_20752001D;SPAN=23750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:15:6:66,6,0:0:22:-66.02:66.02
18	20737933	824051:1	T	T[18:20802928[	31	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=824051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20737933(+)-18:20802928(-)__18_20800501_20825501D;SPAN=64995;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31
18	20802928	824051:2	A	]18:20737933]A	31	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=824051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20737933(+)-18:20802928(-)__18_20800501_20825501D;SPAN=64995;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31
18	22231992	824369:1	A	]18:22232842]A	19	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=824369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:22231992(-)-18:22232842(+)__18_22221501_22246501D;SPAN=850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:0:9:-19.59:21.23
18	22232842	824369:2	A	A[18:22231992[	19	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=824369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:22231992(-)-18:22232842(+)__18_22221501_22246501D;SPAN=850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:0:9:-19.59:21.23
18	22550726	988807:1	T	[Un_KN707780v1_decoy:1[T	42	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988807:2;MATENM=0;NM=0;NUMPARTS=4;SCTG=c_631_1_5691_3C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91
18	22550726	824462:1	T	[Un_KN707780v1_decoy:1[T	75	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=824462:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_22540001_22565001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92
18	24323408	824912:1	C	C[18:24324630[	65	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTAGC;MAPQ=60;MATEID=824912:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_24304001_24329001_24C;SPAN=1222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:60:65.6:65.6,0,85.4:25:0:-65.66:65.8
18	24324630	824912:2	A	]18:24323408]A	65	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTAGC;MAPQ=60;MATEID=824912:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_24304001_24329001_24C;SPAN=1222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:60:65.6:65.6,0,85.4:25:0:-65.66:65.8
18	27149217	825552:1	C	]18:27159058]C	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=825552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:27149217(-)-18:27159058(+)__18_27146001_27171001D;SPAN=9841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
18	27159058	825552:2	T	T[18:27149217[	30	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=825552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:27149217(-)-18:27159058(+)__18_27146001_27171001D;SPAN=9841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
18	28693120	825853:1	A	A[18:28698448[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=825853:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:28693120(+)-18:28698448(-)__18_28689501_28714501D;SPAN=5328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
18	28698448	825853:2	A	]18:28693120]A	42	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=825853:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:28693120(+)-18:28698448(-)__18_28689501_28714501D;SPAN=5328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
18	35943975	827512:1	A	]18:36231155]A	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=827512:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36211001_36236001_21C;SPAN=287180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
18	36114704	827477:1	C	]18:36135496]C	64	PASS	EVDNC=ASSMB;INSERTION=TTCCATTTCTGGAATTCATAA;MAPQ=60;MATEID=827477:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36113001_36138001_4C;SPAN=20792;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:76:64.7:64.7,0,124.1:26:0:-64.46:65.58
18	36135496	827477:2	A	A[18:36114704[	64	PASS	EVDNC=ASSMB;INSERTION=TTCCATTTCTGGAATTCATAA;MAPQ=60;MATEID=827477:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36113001_36138001_4C;SPAN=20792;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:76:64.7:64.7,0,124.1:26:0:-64.46:65.58
18	36231155	827512:2	A	A[18:35943975[	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=827512:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36211001_36236001_21C;SPAN=287180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
18	39481682	828095:1	C	C[18:39481999[	46	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATCAGATTC;MAPQ=60;MATEID=828095:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_39469501_39494501_6C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:9:4.2:46.2,4.2,0:15:0:-46.21:46.21
18	39481999	828095:2	A	]18:39481682]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATCAGATTC;MAPQ=60;MATEID=828095:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_39469501_39494501_6C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:9:4.2:46.2,4.2,0:15:0:-46.21:46.21
18	41284924	828480:1	A	A[18:41288379[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=828480:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:41284924(+)-18:41288379(-)__18_41282501_41307501D;SPAN=3455;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:5:9:99,9,0:0:33:-99.02:99.02
18	41288379	828480:2	A	]18:41284924]A	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=828480:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:41284924(+)-18:41288379(-)__18_41282501_41307501D;SPAN=3455;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:5:9:99,9,0:0:33:-99.02:99.02
18	45729261	829333:1	C	]18:45825466]C	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGTT;MAPQ=60;MATEID=829333:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_45815001_45840001_9C;SPAN=96205;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:6:5:-23.11:23.11
18	45825466	829333:2	T	T[18:45729261[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGTT;MAPQ=60;MATEID=829333:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_45815001_45840001_9C;SPAN=96205;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:6:5:-23.11:23.11
18	46441888	614599:2	G	[12:7677446[G	33	PASS	DISC_MAPQ=0;EVDNC=ASDIS;INSERTION=GGCCC;MAPQ=56;MATEID=614599:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_7668501_7693501_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:8:3:33,3,0:9:6:-33.01:33.01
18	48671984	829827:1	A	A]Un_KN707797v1_decoy:4209]	52	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=829827:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_18_48657001_48682001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81
18	50168722	830247:1	A	A[18:50172016[	49	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=830247:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:50168722(+)-18:50172016(-)__18_50151501_50176501D;SPAN=3294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:3:4.5:49.5,4.5,0:0:17:-49.51:49.51
18	50172016	830247:2	A	]18:50168722]A	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=830247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:50168722(+)-18:50172016(-)__18_50151501_50176501D;SPAN=3294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:3:4.5:49.5,4.5,0:0:17:-49.51:49.51
18	53679599	831138:1	A	A[18:53684205[	72	PASS	EVDNC=ASSMB;INSERTION=GAATAGGTGGCTATCTTCTAGGTGGCTAAACACCT;MAPQ=60;MATEID=831138:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_18_53655001_53680001_3C;SPAN=4606;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:24:0:-72.62:72.62
18	53684205	831138:2	A	]18:53679599]A	72	PASS	EVDNC=ASSMB;INSERTION=GAATAGGTGGCTATCTTCTAGGTGGCTAAACACCT;MAPQ=60;MATEID=831138:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_18_53655001_53680001_3C;SPAN=4606;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:24:0:-72.62:72.62
18	54415776	831595:1	G	]18:55012965]G	46	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=831595:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_55002501_55027501_1C;SPAN=597189;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
18	54426714	831418:1	G	G[18:54430589[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=831418:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54426714(+)-18:54430589(-)__18_54414501_54439501D;SPAN=3875;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:13:12.3:135.3,12.3,0:0:44:-135.3:135.3
18	54430589	831418:2	G	]18:54426714]G	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=831418:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54426714(+)-18:54430589(-)__18_54414501_54439501D;SPAN=3875;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:13:12.3:135.3,12.3,0:0:44:-135.3:135.3
18	54537527	831451:1	N	]18:54538399]N	95	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=831451:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54537527(-)-18:54538399(+)__18_54537001_54562001D;SPAN=872;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:25:8.7:95.7,8.7,0:0:32:-95.72:95.72
18	54538399	831451:2	A	A[18:54537527[	95	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=831451:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54537527(-)-18:54538399(+)__18_54537001_54562001D;SPAN=872;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:25:8.7:95.7,8.7,0:0:32:-95.72:95.72
18	55012965	831595:2	G	G[18:54415776[	46	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=831595:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_55002501_55027501_1C;SPAN=597189;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
18	57714342	832138:2	C	[5:176306407[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=832138:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:15:11.7:128.7,11.7,0:25:23:-128.7:128.7
18	57714588	832137:2	G	G]5:176306387]	82	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=832137:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:27:7:-82.52:82.52
18	60943836	832894:1	T	]18:61036218]T	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=832894:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_61029501_61054501_1C;SPAN=92382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:13:4.2:46.2,4.2,0:11:11:-46.21:46.21
18	61036218	832894:2	A	A[18:60943836[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=832894:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_61029501_61054501_1C;SPAN=92382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:13:4.2:46.2,4.2,0:11:11:-46.21:46.21
18	66670210	834219:1	C	]18:66682051]C	23	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=834219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_66664501_66689501_5C;SPAN=11841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
18	66682051	834219:2	T	T[18:66670210[	23	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=834219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_66664501_66689501_5C;SPAN=11841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
18	68905257	349695:2	G	[6:75321511[G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=349695:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_75313001_75338001_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:14:3:-49.51:49.51
18	71950157	835731:2	T	T]2:143253785]	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=835731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:143253785(+)-18:71950157(+)__18_71932001_71957001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:6:3.3:36.3,3.3,0:0:12:-36.31:36.31
18	74044264	836323:2	A	[9:125123053[A	46	PASS	DISC_MAPQ=7;EVDNC=ASDIS;INSERTION=AGATA;MAPQ=60;MATEID=836323:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_18_74039001_74064001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:12:4:-46.21:46.21
18	74044279	836324:2	C	C]9:125123230]	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=836324:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_18_74039001_74064001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:15:6:-56.11:56.11
19	559970	838208:1	C	C[19:560561[	12	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGC;MAPQ=60;MATEID=838208:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_539001_564001_104C;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
19	560561	838208:2	G	]19:559970]G	12	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGC;MAPQ=41;MATEID=838208:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_539001_564001_104C;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
19	1181750	838461:1	A	]19:1259508]A	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=838461:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:1181750(-)-19:1259508(+)__19_1249501_1274501D;SPAN=77758;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
19	1182662	838437:1	A	A[19:1183136[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCA;MAPQ=60;MATEID=838437:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_1176001_1201001_58C;SPAN=474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:9:4:-34.76:34.76
19	1183136	838437:2	G	]19:1182662]G	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCA;MAPQ=60;MATEID=838437:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_1176001_1201001_58C;SPAN=474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:9:4:-34.76:34.76
19	1259508	838461:2	T	T[19:1181750[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=838461:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:1181750(-)-19:1259508(+)__19_1249501_1274501D;SPAN=77758;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
19	4511483	839493:1	G	]19:4511907]G	32	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=GTCAGCACGGTCTTGGCCGTGTCTACACC;MAPQ=60;MATEID=839493:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_31C;SPAN=424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:24:26.3:32.9,0,26.3:9:3:-32.89:32.89
19	4511907	839493:2	C	C[19:4511483[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTCAGCACGGTCTTGGCCGTGTCTACACC;MAPQ=60;MATEID=839493:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_31C;SPAN=424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:24:26.3:32.9,0,26.3:9:3:-32.89:32.89
19	4512616	839494:1	T	T[19:4513083[	22	PASS	EVDNC=ASSMB;HOMSEQ=TGGTGTCCACGCCGGTCTGGATGGTTCCT;MAPQ=60;MATEID=839494:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_61C;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
19	4513083	839494:2	T	]19:4512616]T	22	PASS	EVDNC=ASSMB;HOMSEQ=TGGTGTCCACGCCGGTCTGGATGGTTCCT;MAPQ=60;MATEID=839494:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_61C;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
19	4618612	839527:1	G	G[19:4619569[	9	PASS	EVDNC=ASSMB;HOMSEQ=CCTCTCCTCTGTCTCTCCCTCTCCTCTG;MAPQ=60;MATEID=839527:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_4606001_4631001_42C;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:12:9.8:9.8,0,19.7:4:0:-9.831:10.03
19	4619569	839527:2	C	]19:4618612]C	9	PASS	EVDNC=ASSMB;HOMSEQ=CCTCTCCTCTGTCTCTCCCTCTCCTCTG;MAPQ=60;MATEID=839527:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_4606001_4631001_42C;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:12:9.8:9.8,0,19.7:4:0:-9.831:10.03
19	5396869	839792:1	A	]19:5397846]A	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=839792:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_5390001_5415001_78C;SPAN=977;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
19	5397846	839792:2	A	A[19:5396869[	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=839792:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_5390001_5415001_78C;SPAN=977;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
19	5761464	839907:1	G	]19:5761619]G	44	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=839907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_5757501_5782501_26C;SPAN=155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:29:28.1:44.6,0,28.1:16:0:-44.86:44.86
19	5761619	839907:2	G	G[19:5761464[	44	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=839907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_5757501_5782501_26C;SPAN=155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:29:28.1:44.6,0,28.1:16:0:-44.86:44.86
19	6163211	840019:1	A	A[19:6163480[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=840019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_6149501_6174501_3C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:9:13:-56.11:56.11
19	6163480	840019:2	C	]19:6163211]C	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=840019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_6149501_6174501_3C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:9:13:-56.11:56.11
19	7153006	840455:1	A	]19:7153587]A	19	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=840455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7153006(-)-19:7153587(+)__19_7129501_7154501D;SPAN=581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
19	7153587	840455:2	T	T[19:7153006[	19	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=840455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7153006(-)-19:7153587(+)__19_7129501_7154501D;SPAN=581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
19	7322146	840547:1	G	[19:7322460[G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=840547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7322146(-)-19:7322460(-)__19_7301001_7326001D;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
19	7322460	840547:2	A	[19:7322146[A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=840547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7322146(-)-19:7322460(-)__19_7301001_7326001D;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
19	8346856	841006:1	G	G[19:8349598[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=841006:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_8330001_8355001_50C;SPAN=2742;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
19	8349598	841006:2	A	]19:8346856]A	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=841006:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_8330001_8355001_50C;SPAN=2742;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
19	8473352	378412:2	T	]7:5791828]T	29	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TCGGGAGGCTGAGGCAG;MAPQ=41;MATEID=378412:1;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_7_5782001_5807001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:10:5:-29.71:29.71
19	8896565	841246:1	C	]Un_JTFH01000107v1_decoy:3383]C	19	PASS	EVDNC=ASSMB;HOMSEQ=CACCACCACCA;MAPQ=60;MATEID=841246:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_8893501_8918501_84C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89
19	8896582	994908:1	T	T]Un_JTFH01000017v1_decoy:7832]	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=994908:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_860_1_7832_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:2:3:33,3,0:11:0:-33.01:33.01
19	9112286	841364:1	C	C[19:9114446[	20	PASS	EVDNC=ASSMB;HOMSEQ=CATGCCTGTAATCCCAGC;MAPQ=60;MATEID=841364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_9114001_9139001_114C;SPAN=2160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:9:0.8:20.6,0,0.8:7:0:-21.46:21.46
19	9114446	841364:2	C	]19:9112286]C	20	PASS	EVDNC=ASSMB;HOMSEQ=CATGCCTGTAATCCCAGC;MAPQ=60;MATEID=841364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_9114001_9139001_114C;SPAN=2160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:9:0.8:20.6,0,0.8:7:0:-21.46:21.46
19	9167128	463125:2	T	]8:93654319]T	62	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=463125:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93654319(+)-19:9167128(-)__8_93639001_93664001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:0:21:-62.72:62.72
19	10890365	841999:1	T	]19:10986999]T	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=841999:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_10976001_11001001_62C;SPAN=96634;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
19	10986999	841999:2	T	T[19:10890365[	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=841999:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_10976001_11001001_62C;SPAN=96634;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
19	12445946	842403:1	G	G[19:12447413[	36	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=842403:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_19_12446001_12471001_17C;SPAN=1467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:0:3.3:36.3,3.3,0:0:12:-36.31:36.31
19	12447413	842403:2	G	]19:12445946]G	36	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=842403:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_19_12446001_12471001_17C;SPAN=1467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:0:3.3:36.3,3.3,0:0:12:-36.31:36.31
19	12584070	842464:1	A	A[19:12588117[	52	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCCCA;MAPQ=60;MATEID=842464:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_12568501_12593501_6C;SPAN=4047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	12588117	842464:2	G	]19:12584070]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCCCA;MAPQ=60;MATEID=842464:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_12568501_12593501_6C;SPAN=4047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	12677341	842528:1	A	]19:12816052]A	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=842528:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:12677341(-)-19:12816052(+)__19_12813501_12838501D;SPAN=138711;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:0:13:-39.61:39.61
19	12816052	842528:2	C	C[19:12677341[	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=842528:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:12677341(-)-19:12816052(+)__19_12813501_12838501D;SPAN=138711;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:0:13:-39.61:39.61
19	13737615	842826:2	T	[6:147050431[T	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTGGCTAATTTTTGTATTTTTAGTAGAGA;INSERTION=AAGCCACCGTGTCCCGCCAGCATCCACCTGC;MAPQ=60;MATEID=842826:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_19_13720001_13745001_137C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:14:10.5:115.5,10.5,0:37:7:-115.5:115.5
19	14621596	843081:1	T	T[19:14623316[	15	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=843081:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:14621596(+)-19:14623316(-)__19_14602001_14627001D;SPAN=1720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:52:15.2:15.2,0,114.2:0:9:-15.09:19.61
19	14623316	843081:2	A	]19:14621596]A	15	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=843081:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:14621596(+)-19:14623316(-)__19_14602001_14627001D;SPAN=1720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:52:15.2:15.2,0,114.2:0:9:-15.09:19.61
19	14935580	843247:1	T	T[19:14938666[	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=843247:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_14920501_14945501_102C;SPAN=3086;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:11:0:-29.57:29.57
19	14938666	843247:2	T	]19:14935580]T	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=843247:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_14920501_14945501_102C;SPAN=3086;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:11:0:-29.57:29.57
19	15675292	843627:1	T	[19:15777541[T	85	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TGTCCACAGGTGCACAGGAGGCACTAGCACAGAACCTGGCATAAG;MAPQ=60;MATEID=843627:2;MATENM=3;NM=14;NUMPARTS=2;SCTG=c_19_15753501_15778501_69C;SPAN=102249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:18:7.8:85.8,7.8,0:14:15:-85.82:85.82
19	15777541	843627:2	C	[19:15675292[C	85	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TGTCCACAGGTGCACAGGAGGCACTAGCACAGAACCTGGCATAAG;MAPQ=60;MATEID=843627:1;MATENM=14;NM=3;NUMPARTS=2;SCTG=c_19_15753501_15778501_69C;SPAN=102249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:18:7.8:85.8,7.8,0:14:15:-85.82:85.82
19	16256431	843938:1	C	]19:16256542]C	83	PASS	EVDNC=ASSMB;INSERTION=CTGATTAGCTGGGATCGCAGGCACATGTG;MAPQ=60;MATEID=843938:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_16243501_16268501_91C;SPAN=111;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:42:21.2:83.9,0,21.2:29:0:-85.96:85.96
19	16256542	843938:2	C	C[19:16256431[	83	PASS	EVDNC=ASSMB;INSERTION=CTGATTAGCTGGGATCGCAGGCACATGTG;MAPQ=60;MATEID=843938:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_16243501_16268501_91C;SPAN=111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:42:21.2:83.9,0,21.2:29:0:-85.96:85.96
19	17722273	844421:1	G	]19:17722440]G	27	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=844421:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_17713501_17738501_70C;SPAN=167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
19	17722440	844421:2	A	A[19:17722273[	27	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=844421:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_17713501_17738501_70C;SPAN=167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
19	17745327	844424:1	T	T[19:17745972[	42	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AAAAATTAGCTGGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACT;MAPQ=60;MATEID=844424:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_19_17738001_17763001_74C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:11:3.9:42.9,3.9,0:7:8:-42.91:42.91
19	17745972	844424:2	A	]19:17745327]A	42	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AAAAATTAGCTGGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACT;MAPQ=60;MATEID=844424:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_19_17738001_17763001_74C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:11:3.9:42.9,3.9,0:7:8:-42.91:42.91
19	18052042	844540:1	G	]19:18069225]G	12	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=844540:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_18056501_18081501_131C;SPAN=17183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:15:12.2:12.2,0,25.4:4:2:-12.29:12.54
19	18069225	844540:2	G	G[19:18052042[	12	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=844540:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_18056501_18081501_131C;SPAN=17183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:15:12.2:12.2,0,25.4:4:2:-12.29:12.54
19	19147213	844918:1	A	A[19:19147484[	47	PASS	EVDNC=ASSMB;HOMSEQ=AGGA;MAPQ=60;MATEID=844918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_19134501_19159501_81C;SPAN=271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
19	19147484	844918:2	A	]19:19147213]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AGGA;MAPQ=60;MATEID=844918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_19134501_19159501_81C;SPAN=271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
19	20065920	845168:1	T	T[19:20066218[	69	PASS	EVDNC=ASSMB;HOMSEQ=TCAATCTATTCCT;MAPQ=60;MATEID=845168:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_20065501_20090501_12C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
19	20066218	845168:2	T	]19:20065920]T	69	PASS	EVDNC=ASSMB;HOMSEQ=TCAATCTATTCCT;MAPQ=60;MATEID=845168:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_20065501_20090501_12C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
19	20618462	845443:1	A	A]19:20701122]	26	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=845443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20618462(+)-19:20701122(+)__19_20678001_20703001D;SPAN=82660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
19	20619278	845444:1	G	[19:20700182[G	59	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=845444:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20619278(-)-19:20700182(-)__19_20678001_20703001D;SPAN=80904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34
19	20700182	845444:2	T	[19:20619278[T	59	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=845444:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20619278(-)-19:20700182(-)__19_20678001_20703001D;SPAN=80904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34
19	20701122	845443:2	T	T]19:20618462]	26	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=845443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20618462(+)-19:20701122(+)__19_20678001_20703001D;SPAN=82660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
19	21089889	845809:1	A	]19:21151960]A	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATTTGTACACTTTTGCCAGCATGCCAGGCTTCTGGG;MAPQ=60;MATEID=845809:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_21143501_21168501_7C;SPAN=62071;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:10:2:-33.15:33.15
19	21136664	845806:1	T	T[19:21136820[	20	PASS	EVDNC=ASSMB;HOMSEQ=AGAAT;MAPQ=60;MATEID=845806:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_21119001_21144001_97C;SPAN=156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
19	21136820	845806:2	A	]19:21136664]A	20	PASS	EVDNC=ASSMB;HOMSEQ=AGAAT;MAPQ=60;MATEID=845806:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_21119001_21144001_97C;SPAN=156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
19	21151960	845809:2	G	G[19:21089889[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATTTGTACACTTTTGCCAGCATGCCAGGCTTCTGGG;MAPQ=60;MATEID=845809:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_21143501_21168501_7C;SPAN=62071;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:10:2:-33.15:33.15
19	21720254	846251:1	T	T[19:21722766[	23	PASS	EVDNC=ASSMB;HOMSEQ=TGTTAT;MAPQ=60;MATEID=846251:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_21707001_21732001_71C;SPAN=2512;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59
19	21722766	846251:2	T	]19:21720254]T	23	PASS	EVDNC=ASSMB;HOMSEQ=TGTTAT;MAPQ=60;MATEID=846251:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_21707001_21732001_71C;SPAN=2512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59
19	22958074	846898:1	C	C[19:22960117[	46	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=846898:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:22958074(+)-19:22960117(-)__19_22956501_22981501D;SPAN=2043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:1:4.2:46.2,4.2,0:0:16:-46.21:46.21
19	22960117	846898:2	C	]19:22958074]C	46	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=846898:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:22958074(+)-19:22960117(-)__19_22956501_22981501D;SPAN=2043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:1:4.2:46.2,4.2,0:0:16:-46.21:46.21
19	23379925	847308:1	A	A]19:23799606]	26	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=847308:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23379925(+)-19:23799606(+)__19_23789501_23814501D;SPAN=419681;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
19	23622991	847128:1	C	C[19:23625506[	66	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GGGTTCAAGCAATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=847128:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_23618001_23643001_15C;SPAN=2515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:6:6:66,6,0:13:14:-66.02:66.02
19	23625506	847128:2	G	]19:23622991]G	66	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=GGGTTCAAGCAATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=847128:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_23618001_23643001_15C;SPAN=2515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:6:6:66,6,0:13:14:-66.02:66.02
19	23753137	847263:1	G	]19:23753636]G	91	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=847263:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_23740501_23765501_17C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:39:5.6:91.4,0,5.6:22:16:-95.68:95.68
19	23753636	847263:2	G	G[19:23753137[	91	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=847263:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_23740501_23765501_17C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:39:5.6:91.4,0,5.6:22:16:-95.68:95.68
19	23799606	847308:2	A	A]19:23379925]	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=847308:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23379925(+)-19:23799606(+)__19_23789501_23814501D;SPAN=419681;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
19	23845125	847363:2	C	C]1:28189261]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=847363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:28189261(+)-19:23845125(+)__19_23838501_23863501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
19	23872785	847437:1	T	T[19:23967785[	44	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=847437:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23872785(+)-19:23967785(-)__19_23961001_23986001D;SPAN=95000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:0:15:-45.49:45.49
19	23873150	847438:1	A	]19:23968297]A	75	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=847438:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23873150(-)-19:23968297(+)__19_23961001_23986001D;SPAN=95147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:17:6.9:75.9,6.9,0:0:25:-75.92:75.92
19	23967785	847437:2	G	]19:23872785]G	44	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=847437:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23872785(+)-19:23967785(-)__19_23961001_23986001D;SPAN=95000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:0:15:-45.49:45.49
19	23968297	847438:2	A	A[19:23873150[	75	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=847438:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23873150(-)-19:23968297(+)__19_23961001_23986001D;SPAN=95147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:17:6.9:75.9,6.9,0:0:25:-75.92:75.92
19	24358987	847575:1	T	T[19:24359111[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCATTGAGGCCTATGGTGAAAAAGGAAATATCT;MAPQ=60;MATEID=847575:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_24353001_24378001_44C;SPAN=124;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:46:13.7:99.5,0,13.7:29:5:-102.7:102.7
19	24359111	847575:2	G	]19:24358987]G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCATTGAGGCCTATGGTGAAAAAGGAAATATCT;MAPQ=60;MATEID=847575:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_24353001_24378001_44C;SPAN=124;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:46:13.7:99.5,0,13.7:29:5:-102.7:102.7
19	24895890	847832:1	N	]19:24896879]N	16	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=847832:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24895890(-)-19:24896879(+)__19_24892001_24917001D;SPAN=989;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:47:16.7:16.7,0,99.2:0:9:-16.5:20.04
19	24896321	847840:1	A	]19:24897433]A	10	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=847840:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896321(-)-19:24897433(+)__19_24892001_24917001D;SPAN=1112;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:150:10.6:10.6,0,367.1:0:16:-10.65:31.23
19	24896648	847842:1	C	C[19:24897605[	6	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=847842:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896648(+)-19:24897605(-)__19_24892001_24917001D;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:129:6.8:6.8,0,317:0:13:-6.652:25.03
19	24896879	847832:2	G	G[19:24895890[	16	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=847832:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24895890(-)-19:24896879(+)__19_24892001_24917001D;SPAN=989;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:47:16.7:16.7,0,99.2:0:9:-16.5:20.04
19	24896904	847754:2	A	A[5:47172599[	41	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=847754:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:47172599(-)-19:24896904(+)__19_24892001_24917001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:54:41:41,0,93.8:0:17:-40.94:42.13
19	24897340	847848:1	T	]19:27249403]T	99	PASS	DISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=TTCCTTTAGACAGAGCAGATTTGAAACACTCTTTTTGTGGAATTTG;MAPQ=60;MATEID=847848:2;MATENM=12;NM=1;NUMPARTS=2;SCTG=c_19_24892001_24917001_37C;SPAN=2352063;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:90:53.9:172.7,0,53.9:52:10:-176.2:176.2
19	24897433	847840:2	A	A[19:24896321[	10	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=847840:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896321(-)-19:24897433(+)__19_24892001_24917001D;SPAN=1112;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:150:10.6:10.6,0,367.1:0:16:-10.65:31.23
19	24897605	847842:2	T	]19:24896648]T	6	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=847842:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896648(+)-19:24897605(-)__19_24892001_24917001D;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:129:6.8:6.8,0,317:0:13:-6.652:25.03
19	27240874	847883:2	N	]16:36353193]N	26	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=847883:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36353193(+)-19:27240874(-)__19_27219501_27244501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
19	27249403	847848:2	G	G[19:24897340[	99	PASS	DISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=TTCCTTTAGACAGAGCAGATTTGAAACACTCTTTTTGTGGAATTTG;MAPQ=60;MATEID=847848:1;MATENM=1;NM=12;NUMPARTS=2;SCTG=c_19_24892001_24917001_37C;SPAN=2352063;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:90:53.9:172.7,0,53.9:52:10:-176.2:176.2
19	27310510	848031:1	A	]19:27315694]A	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AGTTGAACCTATCTTTTGATAGAGCAGTTTTGAAACTCTCTTTTTGTAGAATCTCCAAGTGGATA;MAPQ=60;MATEID=848031:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_27293001_27318001_61C;SPAN=5184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:36:10.2:112.2,10.2,0:22:18:-112.2:112.2
19	27315694	848031:2	A	A[19:27310510[	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGTTGAACCTATCTTTTGATAGAGCAGTTTTGAAACTCTCTTTTTGTAGAATCTCCAAGTGGATA;MAPQ=60;MATEID=848031:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_27293001_27318001_61C;SPAN=5184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:36:10.2:112.2,10.2,0:22:18:-112.2:112.2
19	27339321	848102:1	T	]19:27339693]T	33	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=TTTCCAAACTTCTCAATCAAAAGAAAGGTTC;MAPQ=60;MATEID=848102:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_19_27317501_27342501_13C;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:139:33.8:33.8,0,314.3:22:2:-33.55:46.99
19	27339693	848102:2	C	C[19:27339321[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCCAAACTTCTCAATCAAAAGAAAGGTTC;MAPQ=60;MATEID=848102:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_19_27317501_27342501_13C;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:139:33.8:33.8,0,314.3:22:2:-33.55:46.99
19	27363523	848281:1	G	G[19:27397934[	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCCTTTTTCACCATAG;MAPQ=60;MATEID=848281:2;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_19_27342001_27367001_569C;SPAN=34411;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:55:47:15.3:168.3,15.3,0:39:19:-168.3:168.3
19	27365941	876115:1	T	[20:30926139[T	68	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCATATTCTACAGAAAGACTGTTTCCAAA;MAPQ=60;MATEID=876115:2;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=TT;SCTG=c_20_30919001_30944001_257C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:98:68.3:68.3,0,177.2:26:4:-68.18:70.92
19	27377200	848414:1	G	G[19:27377491[	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAACTTCCTTG;MAPQ=60;MATEID=848414:2;MATENM=3;NM=10;NUMPARTS=2;SCTG=c_19_27366501_27391501_648C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:79:83.6:113.3,0,83.6:18:23:-113.3:113.3
19	27377491	848414:2	G	]19:27377200]G	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAACTTCCTTG;MAPQ=60;MATEID=848414:1;MATENM=10;NM=3;NUMPARTS=2;SCTG=c_19_27366501_27391501_648C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:79:83.6:113.3,0,83.6:18:23:-113.3:113.3
19	27388979	848453:1	T	T[19:27389239[	6	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=848453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_27366501_27391501_76C;SPAN=260;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:96:6.2:6.2,0,233.9:10:0:-6.025:19.41
19	27389239	848453:2	T	]19:27388979]T	6	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=848453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_27366501_27391501_76C;SPAN=260;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:96:6.2:6.2,0,233.9:10:0:-6.025:19.41
19	27390865	848460:1	G	G[19:27391462[	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=ATATTTGGAGCGCTTTGAGGTCTATGGTGAAAAAGGAACTATCTTCACATTAAACCTAGACAGAATGATTCTGAGAAACTTCTTTG;MAPQ=60;MATEID=848460:2;MATENM=9;NM=8;NUMPARTS=2;SCTG=c_19_27366501_27391501_740C;SPAN=597;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:65:48:18:198,18,0:21:49:-198:198
19	27391462	848460:2	A	]19:27390865]A	99	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=ATATTTGGAGCGCTTTGAGGTCTATGGTGAAAAAGGAACTATCTTCACATTAAACCTAGACAGAATGATTCTGAGAAACTTCTTTG;MAPQ=60;MATEID=848460:1;MATENM=8;NM=9;NUMPARTS=2;SCTG=c_19_27366501_27391501_740C;SPAN=597;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:65:48:18:198,18,0:21:49:-198:198
19	27397934	848281:2	A	]19:27363523]A	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCCTTTTTCACCATAG;MAPQ=60;MATEID=848281:1;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_19_27342001_27367001_569C;SPAN=34411;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:55:47:15.3:168.3,15.3,0:39:19:-168.3:168.3
19	27470475	848602:1	A	A[19:27472339[	82	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTACACCATAGGCCTCA;MAPQ=60;MATEID=848602:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_27464501_27489501_4C;SPAN=1864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:12:7.5:82.5,7.5,0:27:0:-82.52:82.52
19	27472339	848602:2	C	]19:27470475]C	82	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTACACCATAGGCCTCA;MAPQ=60;MATEID=848602:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_27464501_27489501_4C;SPAN=1864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:12:7.5:82.5,7.5,0:27:0:-82.52:82.52
19	29459396	849209:1	T	T[19:29465260[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=849209:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:29459396(+)-19:29465260(-)__19_29449001_29474001D;SPAN=5864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91
19	29465260	849209:2	A	]19:29459396]A	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=849209:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:29459396(+)-19:29465260(-)__19_29449001_29474001D;SPAN=5864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91
19	29897897	849377:1	T	T[19:29902194[	79	PASS	EVDNC=ASSMB;HOMSEQ=TAATTTTTATTTTT;MAPQ=60;MATEID=849377:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_29890001_29915001_36C;SPAN=4297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:24:0:-78.56:78.56
19	29902194	849377:2	T	]19:29897897]T	79	PASS	EVDNC=ASSMB;HOMSEQ=TAATTTTTATTTTT;MAPQ=60;MATEID=849377:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_29890001_29915001_36C;SPAN=4297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:24:0:-78.56:78.56
19	30526433	849550:1	C	C[19:30526744[	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAC;MAPQ=60;MATEID=849550:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_30502501_30527501_43C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
19	30526744	849550:2	A	]19:30526433]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAC;MAPQ=60;MATEID=849550:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_30502501_30527501_43C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
19	32019277	669546:2	A	A[13:49318685[	49	PASS	DISC_MAPQ=7;EVDNC=ASDIS;MAPQ=60;MATEID=669546:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_49294001_49319001_26C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:14:5:-49.51:49.51
19	32596050	850106:1	C	]19:32596653]C	36	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=850106:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:32596050(-)-19:32596653(+)__19_32585001_32610001D;SPAN=603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05
19	32596653	850106:2	A	A[19:32596050[	36	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=850106:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:32596050(-)-19:32596653(+)__19_32585001_32610001D;SPAN=603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05
19	33249724	850374:1	A	]19:33250465]A	63	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=850374:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:33249724(-)-19:33250465(+)__19_33246501_33271501D;SPAN=741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:44:47:63.5,0,47:0:23:-63.68:63.68
19	33250465	850374:2	C	C[19:33249724[	63	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=850374:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:33249724(-)-19:33250465(+)__19_33246501_33271501D;SPAN=741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:44:47:63.5,0,47:0:23:-63.68:63.68
19	34392184	850796:1	T	]Un_KN707807v1_decoy:4616]T	44	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=850796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_34373501_34398501_126C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85
19	36555293	851508:1	T	T[19:36555596[	52	PASS	EVDNC=ASSMB;HOMSEQ=GCGATAAAGTTTTT;MAPQ=60;MATEID=851508:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_36554001_36579001_38C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	36555596	851508:2	G	]19:36555293]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GCGATAAAGTTTTT;MAPQ=60;MATEID=851508:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_36554001_36579001_38C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	38146650	852018:1	C	]19:38163477]C	45	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CAGAGTG;MAPQ=60;MATEID=852018:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_38146501_38171501_2C;SPAN=16827;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:27:22.1:45.2,0,22.1:11:12:-45.63:45.63
19	38163477	852018:2	G	G[19:38146650[	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAGTG;MAPQ=60;MATEID=852018:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_38146501_38171501_2C;SPAN=16827;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:27:22.1:45.2,0,22.1:11:12:-45.63:45.63
19	39766920	852503:1	T	T[19:39767211[	18	PASS	EVDNC=ASSMB;HOMSEQ=GCATCAGCGATATTTT;MAPQ=60;MATEID=852503:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_39763501_39788501_48C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:16:18.8:18.8,0,18.8:7:0:-18.61:18.62
19	39767211	852503:2	G	]19:39766920]G	18	PASS	EVDNC=ASSMB;HOMSEQ=GCATCAGCGATATTTT;MAPQ=60;MATEID=852503:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_39763501_39788501_48C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:16:18.8:18.8,0,18.8:7:0:-18.61:18.62
19	40107197	852673:1	T	T[19:40109854[	40	PASS	EVDNC=ASSMB;HOMSEQ=CCAATTAATAGTTTT;MAPQ=60;MATEID=852673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_40106501_40131501_40C;SPAN=2657;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98
19	40109854	852673:2	C	]19:40107197]C	40	PASS	EVDNC=ASSMB;HOMSEQ=CCAATTAATAGTTTT;MAPQ=60;MATEID=852673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_40106501_40131501_40C;SPAN=2657;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98
19	41102820	852998:1	C	C[19:41104286[	47	PASS	EVDNC=ASSMB;HOMSEQ=AGAAAACCCCAACATCTC;MAPQ=60;MATEID=852998:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_41086501_41111501_76C;SPAN=1466;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
19	41104286	852998:2	A	]19:41102820]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AGAAAACCCCAACATCTC;MAPQ=60;MATEID=852998:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_41086501_41111501_76C;SPAN=1466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
19	41643872	853216:1	G	G[19:41646305[	72	PASS	EVDNC=ASSMB;HOMSEQ=AAGATATAAGATTAG;MAPQ=60;MATEID=853216:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_41625501_41650501_37C;SPAN=2433;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:24:0:-72.62:72.62
19	41646305	853216:2	A	]19:41643872]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AAGATATAAGATTAG;MAPQ=60;MATEID=853216:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_41625501_41650501_37C;SPAN=2433;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:24:0:-72.62:72.62
19	41803700	853279:1	T	T[19:41807214[	47	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=853279:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_41797001_41822001_21C;SPAN=3514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96
19	41803763	853281:1	G	]19:41807383]G	69	PASS	EVDNC=ASSMB;INSERTION=CCCA;MAPQ=60;MATEID=853281:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_4C;SPAN=3620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56
19	41807214	853279:2	C	]19:41803700]C	47	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=853279:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_21C;SPAN=3514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96
19	41807383	853281:2	G	G[19:41803763[	69	PASS	EVDNC=ASSMB;INSERTION=CCCA;MAPQ=60;MATEID=853281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_4C;SPAN=3620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56
19	43679334	853729:1	T	]19:43679927]T	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TGGTGG;MAPQ=60;MATEID=853729:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_19_43659001_43684001_3C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:63:22.1:134.3,0,22.1:35:23:-138.4:138.4
19	43679927	853729:2	G	G[19:43679334[	99	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGGTGG;MAPQ=60;MATEID=853729:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_19_43659001_43684001_3C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:63:22.1:134.3,0,22.1:35:23:-138.4:138.4
19	44546246	854019:1	T	T[19:44546891[	56	PASS	EVDNC=ASSMB;HOMSEQ=GGTGGCATATAATATTTTT;MAPQ=60;MATEID=854019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_44541001_44566001_22C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:70:56.3:56.3,0,119:23:0:-56.25:57.52
19	44546891	854019:2	G	]19:44546246]G	56	PASS	EVDNC=ASSMB;HOMSEQ=GGTGGCATATAATATTTTT;MAPQ=60;MATEID=854019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_44541001_44566001_22C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:70:56.3:56.3,0,119:23:0:-56.25:57.52
19	45635085	854386:1	A	A[19:45635362[	35	PASS	EVDNC=ASSMB;HOMSEQ=CTCCTGACCTCA;MAPQ=60;MATEID=854386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_45619001_45644001_40C;SPAN=277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
19	45635362	854386:2	C	]19:45635085]C	35	PASS	EVDNC=ASSMB;HOMSEQ=CTCCTGACCTCA;MAPQ=60;MATEID=854386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_45619001_45644001_40C;SPAN=277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
19	46275906	854976:1	G	[19:47396150[G	23	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=854976:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:46275906(-)-19:47396150(-)__19_47383001_47408001D;SPAN=1120244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
19	47025044	854871:1	C	C[19:47025446[	82	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTC;MAPQ=60;MATEID=854871:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_47015501_47040501_6C;SPAN=402;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:5:7.5:82.5,7.5,0:15:18:-82.52:82.52
19	47025446	854871:2	T	]19:47025044]T	82	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTC;MAPQ=60;MATEID=854871:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_47015501_47040501_6C;SPAN=402;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:5:7.5:82.5,7.5,0:15:18:-82.52:82.52
19	47396150	854976:2	A	[19:46275906[A	23	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=854976:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:46275906(-)-19:47396150(-)__19_47383001_47408001D;SPAN=1120244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
19	47419531	996298:1	T	]Un_JTFH01000178v1_decoy:2767]T	49	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=996298:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1021_1_2767_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51
19	49078709	855632:1	T	T[19:49079002[	52	PASS	EVDNC=ASSMB;HOMSEQ=TATTTTATTTATTT;MAPQ=60;MATEID=855632:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_49073501_49098501_54C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	49079002	855632:2	T	]19:49078709]T	52	PASS	EVDNC=ASSMB;HOMSEQ=TATTTTATTTATTT;MAPQ=60;MATEID=855632:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_49073501_49098501_54C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	50574634	856125:1	T	T[19:50579255[	27	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=856125:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_50568001_50593001_52C;SPAN=4621;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
19	50579255	856125:2	C	]19:50574634]C	27	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=856125:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_50568001_50593001_52C;SPAN=4621;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
19	50901191	856299:1	C	]19:50982831]C	23	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAG;MAPQ=60;MATEID=856299:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_50960001_50985001_105C;SPAN=81640;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:8:0:-23.11:23.11
19	50903593	856267:1	T	T[19:50905076[	72	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAGTAGCTGGGATTACAGGCACCTGCCACTATGCCTGGCTAATTTTGGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCT;MAPQ=60;MATEID=856267:2;MATENM=0;NM=34;NUMPARTS=2;SCTG=c_19_50886501_50911501_46C;SPAN=1483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:12:6.6:72.6,6.6,0:6:20:-72.62:72.62
19	50905076	856267:2	G	]19:50903593]G	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGTAGCTGGGATTACAGGCACCTGCCACTATGCCTGGCTAATTTTGGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCT;MAPQ=60;MATEID=856267:1;MATENM=34;NM=0;NUMPARTS=2;SCTG=c_19_50886501_50911501_46C;SPAN=1483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:12:6.6:72.6,6.6,0:6:20:-72.62:72.62
19	50982831	856299:2	G	G[19:50901191[	23	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAG;MAPQ=60;MATEID=856299:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_50960001_50985001_105C;SPAN=81640;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:8:0:-23.11:23.11
19	51273153	856400:1	T	T[19:51273448[	20	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTACCACAACTT;MAPQ=60;MATEID=856400:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_51254001_51279001_69C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
19	51273448	856400:2	A	]19:51273153]A	20	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTACCACAACTT;MAPQ=60;MATEID=856400:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_51254001_51279001_69C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
19	51672799	856558:1	G	G[19:51674260[	99	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=856558:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:51672799(+)-19:51674260(-)__19_51670501_51695501D;SPAN=1461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6
19	51674260	856558:2	A	]19:51672799]A	99	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=856558:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:51672799(+)-19:51674260(-)__19_51670501_51695501D;SPAN=1461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6
19	51825382	856668:1	T	[19:52243049[T	11	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=856668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_52234001_52259001_18C;SPAN=417667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:17:11.9:11.9,0,28.4:2:3:-11.73:12.21
19	52243049	856668:2	G	[19:51825382[G	11	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=856668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_52234001_52259001_18C;SPAN=417667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:17:11.9:11.9,0,28.4:2:3:-11.73:12.21
19	52350629	856711:1	G	G[19:52350932[	24	PASS	EVDNC=ASSMB;HOMSEQ=GGAGGCTGCAGTGAGCCAAG;MAPQ=60;MATEID=856711:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_52332001_52357001_48C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:43:24.2:24.2,0,83.6:11:0:-24.22:26.08
19	52350932	856711:2	G	]19:52350629]G	24	PASS	EVDNC=ASSMB;HOMSEQ=GGAGGCTGCAGTGAGCCAAG;MAPQ=60;MATEID=856711:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_52332001_52357001_48C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:43:24.2:24.2,0,83.6:11:0:-24.22:26.08
19	52592887	856849:1	A	A[19:52594355[	82	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=856849:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:52592887(+)-19:52594355(-)__19_52577001_52602001D;SPAN=1468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:7:7.5:82.5,7.5,0:0:27:-82.52:82.52
19	52594355	856849:2	A	]19:52592887]A	82	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=856849:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:52592887(+)-19:52594355(-)__19_52577001_52602001D;SPAN=1468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:7:7.5:82.5,7.5,0:0:27:-82.52:82.52
19	52918961	857052:1	T	T[19:52920955[	19	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAAAAATCT;MAPQ=60;MATEID=857052:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_52920001_52945001_46C;SPAN=1994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:73:19.1:19.1,0,164.3:12:0:-19.09:25.85
19	52920955	857052:2	A	]19:52918961]A	19	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAAAAATCT;MAPQ=60;MATEID=857052:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_52920001_52945001_46C;SPAN=1994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:73:19.1:19.1,0,164.3:12:0:-19.09:25.85
19	53185924	857218:1	T	T[19:53188699[	83	PASS	EVDNC=ASSMB;HOMSEQ=GGGTTTTT;MAPQ=60;MATEID=857218:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_53165001_53190001_68C;SPAN=2775;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92
19	53188699	857218:2	G	]19:53185924]G	83	PASS	EVDNC=ASSMB;HOMSEQ=GGGTTTTT;MAPQ=60;MATEID=857218:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_53165001_53190001_68C;SPAN=2775;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92
19	53433460	857385:1	C	C[19:53470214[	73	PASS	EVDNC=ASSMB;HOMSEQ=TGTCTGGAGCCCATTTCTTTGGCTTCGACTTCGC;MAPQ=60;MATEID=857385:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_19_53459001_53484001_53C;SPAN=36754;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:33:7.4:73.4,0,7.4:25:0:-76.04:76.04
19	53442835	857387:1	G	]19:53480335]G	28	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=857387:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:53442835(-)-19:53480335(+)__19_53459001_53484001D;SPAN=37500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
19	53470214	857385:2	T	]19:53433460]T	73	PASS	EVDNC=ASSMB;HOMSEQ=TGTCTGGAGCCCATTTCTTTGGCTTCGACTTCGC;MAPQ=60;MATEID=857385:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_19_53459001_53484001_53C;SPAN=36754;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:33:7.4:73.4,0,7.4:25:0:-76.04:76.04
19	53480335	857387:2	T	T[19:53442835[	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=857387:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:53442835(-)-19:53480335(+)__19_53459001_53484001D;SPAN=37500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
19	54052300	857659:1	A	A[19:54057389[	56	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTACTCCCAGCTACTTGGGAGGCTGA;MAPQ=60;MATEID=857659:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_19_54047001_54072001_22C;SPAN=5089;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
19	54057389	857659:2	C	]19:54052300]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTACTCCCAGCTACTTGGGAGGCTGA;MAPQ=60;MATEID=857659:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_19_54047001_54072001_22C;SPAN=5089;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
19	54964364	858158:1	C	]19:54965577]C	20	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=858158:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:54964364(-)-19:54965577(+)__19_54953501_54978501D;SPAN=1213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
19	54965577	858158:2	T	T[19:54964364[	20	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=858158:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:54964364(-)-19:54965577(+)__19_54953501_54978501D;SPAN=1213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
19	56963539	859228:1	G	G[19:56964242[	75	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=859228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_56962501_56987501_14C;SPAN=703;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92
19	56964242	859228:2	A	]19:56963539]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=859228:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_56962501_56987501_14C;SPAN=703;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92
19	57824097	859732:1	T	T]19:58014702]	33	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=859732:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:57824097(+)-19:58014702(+)__19_57991501_58016501D;SPAN=190605;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:6:3:33,3,0:0:11:-33.01:33.01
19	58014702	859732:2	G	G]19:57824097]	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=859732:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:57824097(+)-19:58014702(+)__19_57991501_58016501D;SPAN=190605;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:6:3:33,3,0:0:11:-33.01:33.01
19	58106421	859805:1	G	G[19:58106734[	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAAAAAAAGACATCTG;MAPQ=60;MATEID=859805:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_58089501_58114501_22C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:12:8.1:89.1,8.1,0:17:14:-89.12:89.12
19	58106734	859805:2	A	]19:58106421]A	89	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAGAAAAAAAGACATCTG;MAPQ=60;MATEID=859805:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_58089501_58114501_22C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:12:8.1:89.1,8.1,0:17:14:-89.12:89.12
20	1408603	860540:1	T	T[20:1410170[	42	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=860540:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:1408603(+)-20:1410170(-)__20_1396501_1421501D;SPAN=1567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:0:14:-42.91:42.91
20	1410170	860540:2	A	]20:1408603]A	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=860540:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:1408603(+)-20:1410170(-)__20_1396501_1421501D;SPAN=1567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:0:14:-42.91:42.91
20	2379056	860744:1	C	]20:2379968]C	92	PASS	DISC_MAPQ=51;EVDNC=ASDIS;INSERTION=TGAGG;MAPQ=60;MATEID=860744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2376501_2401501_11C;SPAN=912;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:31:8.4:92.4,8.4,0:22:20:-92.42:92.42
20	2379968	860744:2	G	G[20:2379056[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAGG;MAPQ=60;MATEID=860744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2376501_2401501_11C;SPAN=912;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:31:8.4:92.4,8.4,0:22:20:-92.42:92.42
20	2822516	860836:1	T	T[20:2825764[	40	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAACTTGATTT;MAPQ=60;MATEID=860836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2817501_2842501_19C;SPAN=3248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96
20	2825764	860836:2	A	]20:2822516]A	40	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAACTTGATTT;MAPQ=60;MATEID=860836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2817501_2842501_19C;SPAN=3248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96
20	3751228	861147:1	T	]20:3886453]T	49	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=861147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_3871001_3896001_4C;SPAN=135225;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:12:12:-49.51:49.51
20	3886453	861147:2	G	G[20:3751228[	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=861147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_3871001_3896001_4C;SPAN=135225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:12:12:-49.51:49.51
20	4446666	988141:1	G	]Un_KN707691v1_decoy:4885]G	52	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988141:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_542_1_4885_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:4:4.8:52.8,4.8,0:18:0:-52.81:52.81
20	4988872	861527:1	T	]20:5120848]T	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=861527:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_5120501_5145501_29C;SPAN=131976;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:11:6.8:20,0,6.8:7:0:-20.32:20.32
20	5120848	861527:2	C	C[20:4988872[	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=861527:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_5120501_5145501_29C;SPAN=131976;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:11:6.8:20,0,6.8:7:0:-20.32:20.32
20	5648405	861660:1	G	G[20:5649718[	33	PASS	EVDNC=ASSMB;HOMSEQ=CTGTAATCCCAGCACTTTGGGAGGCCGAGG;MAPQ=60;MATEID=861660:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_20_5635001_5660001_0C;SPAN=1313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:4:3:33,3,0:11:0:-33.01:33.01
20	5649718	861660:2	C	]20:5648405]C	33	PASS	EVDNC=ASSMB;HOMSEQ=CTGTAATCCCAGCACTTTGGGAGGCCGAGG;MAPQ=60;MATEID=861660:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_20_5635001_5660001_0C;SPAN=1313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:4:3:33,3,0:11:0:-33.01:33.01
20	6368548	861822:2	T	T]14:45854840]	27	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=861822:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:45854840(+)-20:6368548(+)__20_6345501_6370501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
20	6681439	861891:2	A	]1:167120498]A	62	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=861891:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_6664001_6689001_24C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
20	7116263	862037:1	T	T[20:7122199[	52	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=862037:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:7116263(+)-20:7122199(-)__20_7105001_7130001D;SPAN=5936;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:17:4.8:52.8,4.8,0:0:18:-52.81:52.81
20	7122199	862037:2	C	]20:7116263]C	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=862037:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:7116263(+)-20:7122199(-)__20_7105001_7130001D;SPAN=5936;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:17:4.8:52.8,4.8,0:0:18:-52.81:52.81
20	7293703	862103:1	T	T[20:7294003[	99	PASS	EVDNC=ASSMB;HOMSEQ=GACAATACATTTTT;MAPQ=60;MATEID=862103:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_7276501_7301501_131C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:24:9.3:102.3,9.3,0:34:0:-102.3:102.3
20	7294003	862103:2	G	]20:7293703]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GACAATACATTTTT;MAPQ=60;MATEID=862103:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_7276501_7301501_131C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:24:9.3:102.3,9.3,0:34:0:-102.3:102.3
20	7850360	862267:1	T	]20:7932110]T	15	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=T;MAPQ=40;MATEID=862267:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_7913501_7938501_79C;SPAN=81750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:15:15.5:15.5,0,22.1:3:6:-15.59:15.65
20	7932110	862267:2	T	T[20:7850360[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=862267:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_7913501_7938501_79C;SPAN=81750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:15:15.5:15.5,0,22.1:3:6:-15.59:15.65
20	8006283	866149:1	A	A[20:21398815[	21	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=866149:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21388501_21413501_37C;SPAN=13392532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11
20	10323922	862941:1	C	]20:10324068]C	41	PASS	EVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=862941:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_10314501_10339501_15C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:41:41.3:41.3,0,61.1:16:0:-41.29:41.52
20	10324068	862941:2	T	T[20:10323922[	41	PASS	EVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=862941:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_10314501_10339501_15C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:41:41.3:41.3,0,61.1:16:0:-41.29:41.52
20	11666903	863362:1	G	G[20:11668022[	62	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=863362:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:11666903(+)-20:11668022(-)__20_11662001_11687001D;SPAN=1119;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:8:5.7:62.7,5.7,0:0:21:-62.72:62.72
20	11668022	863362:2	A	]20:11666903]A	62	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=863362:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:11666903(+)-20:11668022(-)__20_11662001_11687001D;SPAN=1119;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:8:5.7:62.7,5.7,0:0:21:-62.72:62.72
20	14133206	864184:1	T	T[20:14728329[	46	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=864184:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_14724501_14749501_0C;SPAN=595123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:16:0:-46.21:46.21
20	14164805	864303:1	T	T[20:15244618[	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=864303:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15239001_15264001_63C;SPAN=1079813;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:8:3.3:36.3,3.3,0:12:0:-36.31:36.31
20	14728329	864184:2	C	]20:14133206]C	46	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=864184:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_14724501_14749501_0C;SPAN=595123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:16:0:-46.21:46.21
20	14940342	864232:1	A	A[20:14972845[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=864232:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:14940342(+)-20:14972845(-)__20_14969501_14994501D;SPAN=32503;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
20	14972845	864232:2	A	]20:14940342]A	26	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=864232:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:14940342(+)-20:14972845(-)__20_14969501_14994501D;SPAN=32503;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
20	15095882	864265:2	T	T[9:122576590[	29	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=864265:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15092001_15117001_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:10:0:-29.71:29.71
20	15244618	864303:2	G	]20:14164805]G	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=864303:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15239001_15264001_63C;SPAN=1079813;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:8:3.3:36.3,3.3,0:12:0:-36.31:36.31
20	15405783	864334:2	A	]9:122577102]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=864334:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15386001_15411001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61
20	15902057	864505:1	T	T[20:15962741[	42	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=864505:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15949501_15974501_3C;SPAN=60684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:13:0:-42.71:42.71
20	15962741	864505:2	T	]20:15902057]T	42	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=864505:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15949501_15974501_3C;SPAN=60684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:13:0:-42.71:42.71
20	16188295	864602:1	T	]20:16188860]T	24	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=864602:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:16188295(-)-20:16188860(+)__20_16170001_16195001D;SPAN=565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
20	16188860	864602:2	T	T[20:16188295[	24	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=864602:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:16188295(-)-20:16188860(+)__20_16170001_16195001D;SPAN=565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
20	18047369	865156:1	C	C[20:18047636[	46	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CTGAGGTCAGGAGTTCGAGACCAGCCTGACCAATATGATGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCC;MAPQ=60;MATEID=865156:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_20_18032001_18057001_119C;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:8:6:-46.19:46.19
20	18047636	865156:2	C	]20:18047369]C	46	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=CTGAGGTCAGGAGTTCGAGACCAGCCTGACCAATATGATGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCC;MAPQ=60;MATEID=865156:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_20_18032001_18057001_119C;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:8:6:-46.19:46.19
20	18261083	865228:1	A	]20:18262525]A	43	PASS	EVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=865228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_18252501_18277501_108C;SPAN=1442;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
20	18262525	865228:2	A	A[20:18261083[	43	PASS	EVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=865228:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_18252501_18277501_108C;SPAN=1442;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
20	21065659	866065:2	A	[1:53953907[A	32	PASS	DISC_MAPQ=35;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=866065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21045501_21070501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:9:4:-33.83:33.83
20	21305489	866118:1	A	A[20:21308135[	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA;MAPQ=60;MATEID=866118:2;MATENM=11;NM=2;NUMPARTS=2;SCTG=c_20_21290501_21315501_3C;SPAN=2646;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:8:9:99,9,0:20:20:-99.02:99.02
20	21308135	866118:2	C	]20:21305489]C	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA;MAPQ=60;MATEID=866118:1;MATENM=2;NM=11;NUMPARTS=2;SCTG=c_20_21290501_21315501_3C;SPAN=2646;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:8:9:99,9,0:20:20:-99.02:99.02
20	21398815	866149:2	T	]20:8006283]T	21	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=866149:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21388501_21413501_37C;SPAN=13392532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11
20	21799466	866215:1	G	G[20:21799844[	46	PASS	EVDNC=ASSMB;INSERTION=CAACGTGACTTTGACT;MAPQ=60;MATEID=866215:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21780501_21805501_7C;SPAN=378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:35:39.8:46.4,0,39.8:17:0:-46.29:46.29
20	21799844	866215:2	A	]20:21799466]A	46	PASS	EVDNC=ASSMB;INSERTION=CAACGTGACTTTGACT;MAPQ=60;MATEID=866215:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21780501_21805501_7C;SPAN=378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:35:39.8:46.4,0,39.8:17:0:-46.29:46.29
20	21869265	866227:1	T	T[20:21869552[	44	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=866227:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_21854001_21879001_35C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:30:31.1:44.3,0,31.1:16:0:-44.51:44.51
20	21869552	866227:2	T	]20:21869265]T	44	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=866227:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_21854001_21879001_35C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:30:31.1:44.3,0,31.1:16:0:-44.51:44.51
20	23122556	866580:1	C	C[20:23122996[	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=866580:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23103501_23128501_77C;SPAN=440;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
20	23122559	866581:1	G	[20:23122996[G	10	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GG;MAPQ=60;MATEID=866581:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_20_23103501_23128501_37C;SPAN=437;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:35:10.1:10.1,0,76.1:5:4:-9.968:13.04
20	23122996	866580:2	C	]20:23122556]C	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=866580:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23103501_23128501_77C;SPAN=440;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
20	23122996	866581:2	C	[20:23122559[C	10	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GG;MAPQ=60;MATEID=866581:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_20_23103501_23128501_37C;SPAN=437;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:35:10.1:10.1,0,76.1:5:4:-9.968:13.04
20	23520466	866673:1	G	]20:23608865]G	34	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GGGGC;MAPQ=60;MATEID=866673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23495501_23520501_81C;SPAN=88399;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:7:9:-34.32:34.32
20	23608865	866673:2	C	C[20:23520466[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGGC;MAPQ=60;MATEID=866673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23495501_23520501_81C;SPAN=88399;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:7:9:-34.32:34.32
20	23664456	866799:1	A	]20:23795323]A	39	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=866799:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23664456(-)-20:23795323(+)__20_23789501_23814501D;SPAN=130867;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61
20	23702739	866762:1	A	]20:23765575]A	46	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=866762:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23702739(-)-20:23765575(+)__20_23740501_23765501D;SPAN=62836;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:0:15:-46.21:46.21
20	23765575	866762:2	A	A[20:23702739[	46	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=866762:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23702739(-)-20:23765575(+)__20_23740501_23765501D;SPAN=62836;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:0:15:-46.21:46.21
20	23795323	866799:2	T	T[20:23664456[	39	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=866799:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23664456(-)-20:23795323(+)__20_23789501_23814501D;SPAN=130867;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61
20	24288974	866997:1	C	C[20:24289194[	41	PASS	EVDNC=ASSMB;HOMSEQ=TATCCTGTATTTTC;MAPQ=60;MATEID=866997:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_24279501_24304501_80C;SPAN=220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
20	24289194	866997:2	T	]20:24288974]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TATCCTGTATTTTC;MAPQ=60;MATEID=866997:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_24279501_24304501_80C;SPAN=220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
20	24682044	867104:1	G	]20:24682157]G	99	PASS	EVDNC=ASSMB;INSERTION=GC;MAPQ=30;MATEID=867104:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_20_24671501_24696501_54C;SPAN=113;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:37:76:87.8:101,0,87.8:37:0:-100.8:100.8
20	24682157	867104:2	T	T[20:24682044[	99	PASS	EVDNC=ASSMB;INSERTION=GC;MAPQ=60;MATEID=867104:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_20_24671501_24696501_54C;SPAN=113;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:37:76:87.8:101,0,87.8:37:0:-100.8:100.8
20	24923063	867146:1	C	C[20:24923780[	66	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=867146:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_24916501_24941501_23C;SPAN=717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:22:6:66,6,0:20:0:-64.93:64.93
20	24923780	867146:2	G	]20:24923063]G	66	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=867146:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_24916501_24941501_23C;SPAN=717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:22:6:66,6,0:20:0:-64.93:64.93
20	26280028	867748:1	A	A[20:26281095[	75	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=867748:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26280028(+)-20:26281095(-)__20_26264001_26289001D;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:3:6.9:75.9,6.9,0:0:25:-75.92:75.92
20	26281095	867748:2	T	]20:26280028]T	75	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=867748:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26280028(+)-20:26281095(-)__20_26264001_26289001D;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:3:6.9:75.9,6.9,0:0:25:-75.92:75.92
20	26317015	867834:1	T	T[20:26322075[	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTTGGATCTGCAAGTCGACATTTGGAGCGCTTTGAGGCCT;MAPQ=60;MATEID=867834:2;MATENM=8;NM=8;NUMPARTS=2;SCTG=c_20_26313001_26338001_73C;SPAN=5060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:13:14.7:161.7,14.7,0:25:36:-161.7:161.7
20	26322075	867834:2	G	]20:26317015]G	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTTGGATCTGCAAGTCGACATTTGGAGCGCTTTGAGGCCT;MAPQ=60;MATEID=867834:1;MATENM=8;NM=8;NUMPARTS=2;SCTG=c_20_26313001_26338001_73C;SPAN=5060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:13:14.7:161.7,14.7,0:25:36:-161.7:161.7
20	26364309	867910:1	N	N[20:26366032[	38	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=867910:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26364309(+)-20:26366032(-)__20_26362001_26387001D;SPAN=1723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:0:14:-39.03:39.03
20	26366032	867910:2	T	]20:26364309]T	38	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=867910:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26364309(+)-20:26366032(-)__20_26362001_26387001D;SPAN=1723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:0:14:-39.03:39.03
20	26366434	867920:1	A	A[20:26368768[	99	PASS	DISC_MAPQ=9;EVDNC=TSI_G;HOMSEQ=CATTCTCAGAAACTTATTTCTGATGCGTGTACTCAACTAACAGAGTTGAACCTTTGTTTTGTCAGAGAAGATTTCAAACTCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGGTGTGTGGATTTCGCTGGAAACGGGAATACATAGAAAAAGCAGACAGCAGCGTTCTGAGAAACTACTTTGTGATGTTTGCATTGAAGTCACAGAGCTGAACACTCCCTTTCATAGATCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAATGGACATTTGGAGCGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCTATAAAAACTAGACAGAAGCATTCTCTGAAACTAGTTTATGATGCATCTACTCAACTAACAGAGTTGAACATTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTGGAATCTCCAAGTGGA;INSERTION=GTTGAACGTTTGTTTTGACAGAGCAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGTGGATGTTCGGTTAGCTTTGCGGATTTCGTTGGAAACGGGAATACGTATAAAAAGCAGACAGCAGCGTTCTGAGAAACTTCATTGTGATGTTTGCATTCAAGTCACGGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTTTGTCATATCTGGAAGTGTCCATTTGGAGCGCGTTCAAGCTTGTGTTGAAAAAAGAAATATCTTCCCTTAAAAATTAGACAGTAG;MAPQ=48;MATEID=867920:2;MATENM=23;NM=5;NUMPARTS=3;SCTG=c_20_26362001_26387001_43C;SECONDARY;SPAN=2334;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:55:67:4.4:162.8,0,4.4:54:3:-171.5:171.5
20	26368768	867920:2	C	]20:26366434]C	99	PASS	DISC_MAPQ=2;EVDNC=TSI_G;HOMSEQ=CATTCTCAGAAACTTATTTCTGATGCGTGTACTCAACTAACAGAGTTGAACCTTTGTTTTGTCAGAGAAGATTTCAAACTCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGGTGTGTGGATTTCGCTGGAAACGGGAATACATAGAAAAAGCAGACAGCAGCGTTCTGAGAAACTACTTTGTGATGTTTGCATTGAAGTCACAGAGCTGAACACTCCCTTTCATAGATCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAATGGACATTTGGAGCGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCTATAAAAACTAGACAGAAGCATTCTCTGAAACTAGTTTATGATGCATCTACTCAACTAACAGAGTTGAACATTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTGGAATCTCCAAGTGGA;INSERTION=GTTGAACGTTTGTTTTGACAGAGCAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGTGGATGTTCGGTTAGCTTTGCGGATTTCGTTGGAAACGGGAATACGTATAAAAAGCAGACAGCAGCGTTCTGAGAAACTTCATTGTGATGTTTGCATTCAAGTCACGGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTTTGTCATATCTGGAAGTGTCCATTTGGAGCGCGTTCAAGCTTGTGTTGAAAAAAGAAATATCTTCCCTTAAAAATTAGACAGTAG;MAPQ=48;MATEID=867920:1;MATENM=5;NM=23;NUMPARTS=3;SCTG=c_20_26362001_26387001_43C;SECONDARY;SPAN=2334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:55:67:4.4:162.8,0,4.4:54:3:-171.5:171.5
20	26486446	868032:1	A	A[20:26599740[	32	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=868032:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26486446(+)-20:26599740(-)__20_26484501_26509501D;SPAN=113294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:72:32.6:32.6,0,148.1:0:16:-32.58:36.8
20	26517768	868080:1	A	A[20:26596367[	42	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=868080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26517768(+)-20:26596367(-)__20_26509001_26534001D;SPAN=78599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91
20	26545266	868137:1	T	T[20:26556859[	39	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=868137:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26545266(+)-20:26556859(-)__20_26533501_26558501D;SPAN=11593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
20	26556859	868137:2	C	]20:26545266]C	39	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=868137:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26545266(+)-20:26556859(-)__20_26533501_26558501D;SPAN=11593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
20	26596367	868080:2	A	]20:26517768]A	42	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=868080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26517768(+)-20:26596367(-)__20_26509001_26534001D;SPAN=78599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91
20	26599740	868032:2	T	]20:26486446]T	32	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=868032:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26486446(+)-20:26599740(-)__20_26484501_26509501D;SPAN=113294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:72:32.6:32.6,0,148.1:0:16:-32.58:36.8
20	26608405	868274:1	C	C[20:26631417[	99	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=868274:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26608405(+)-20:26631417(-)__20_26607001_26632001D;SPAN=23012;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:0:39:-118.8:118.8
20	26615180	868475:1	G	G[20:27261198[	46	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=868475:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26615180(+)-20:27261198(-)__20_27244001_27269001D;SPAN=646018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:9:4.2:46.2,4.2,0:0:15:-46.21:46.21
20	26631417	868274:2	G	]20:26608405]G	99	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=868274:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26608405(+)-20:26631417(-)__20_26607001_26632001D;SPAN=23012;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:0:39:-118.8:118.8
20	26631898	868385:1	C	C[20:26634139[	21	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=868385:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26631898(+)-20:26634139(-)__20_26631501_26656501D;SPAN=2241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
20	26634139	868385:2	A	]20:26631898]A	21	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=868385:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26631898(+)-20:26634139(-)__20_26631501_26656501D;SPAN=2241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
20	26634424	868389:1	A	A]20:26634787]	23	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=868389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26634424(+)-20:26634787(+)__20_26631501_26656501D;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:47:23.3:23.3,0,92.6:0:11:-23.1:25.58
20	26634787	868389:2	C	C]20:26634424]	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=868389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26634424(+)-20:26634787(+)__20_26631501_26656501D;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:47:23.3:23.3,0,92.6:0:11:-23.1:25.58
20	27261198	868475:2	G	]20:26615180]G	46	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=868475:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26615180(+)-20:27261198(-)__20_27244001_27269001D;SPAN=646018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:9:4.2:46.2,4.2,0:0:15:-46.21:46.21
20	27295507	99662:2	G	G[2:94189122[	50	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=99662:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94189122(-)-20:27295507(+)__2_94178001_94203001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:0:18:-51.49:51.49
20	28728974	892538:1	N	]21:7957991]N	26	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=892538:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28728974(-)-21:7957991(+)__21_7938001_7963001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:81:26.9:26.9,0,175.4:0:15:-26.75:33.16
20	28754934	869379:1	A	A[20:28757852[	99	PASS	DISC_MAPQ=44;EVDNC=ASDIS;HOMSEQ=ATATCCCTTTGCAGACTCTA;MAPQ=60;MATEID=869379:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_28738501_28763501_506C;SPAN=2918;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:41:4:-128.7:128.7
20	28757851	896709:1	N	[21:10798083[N	0	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=896709:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28757851(-)-21:10798083(-)__21_10780001_10805001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:151:16:0,16,412.6:0:8:16.04:13.09
20	28757852	869379:2	A	]20:28754934]A	99	PASS	DISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=ATATCCCTTTGCAGACTCTA;MAPQ=60;MATEID=869379:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_28738501_28763501_506C;SPAN=2918;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:41:4:-128.7:128.7
20	28769332	869502:1	T	]20:28771426]T	60	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TGCACACATCACAAAGAAGTTTCTCAGAATGCTTCTCTCTAGTTTTTATGTGA;MAPQ=60;MATEID=869502:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_20_28763001_28788001_145C;SPAN=2094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:55:60.5:60.5,0,77:11:14:-60.46:60.59
20	28771426	869502:2	A	A[20:28769332[	60	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TGCACACATCACAAAGAAGTTTCTCAGAATGCTTCTCTCTAGTTTTTATGTGA;MAPQ=60;MATEID=869502:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_20_28763001_28788001_145C;SPAN=2094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:55:60.5:60.5,0,77:11:14:-60.46:60.59
20	28781252	658453:2	T	[13:16259044[T	92	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TCAGAATGCTTCTGTGTAGTTTTTTTGTGAAGATATTT;MAPQ=60;MATEID=658453:1;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_13_16243501_16268501_360C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:10:8.4:92.4,8.4,0:21:9:-92.42:92.42
20	28815225	869856:1	C	C[20:28824450[	0	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TATGTGAAGATATTTCC;MAPQ=60;MATEID=869856:2;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_20_28812001_28837001_258C;SPAN=9225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:243:15.1:0,15.1,640.3:10:9:15.49:27.73
20	28815434	869859:1	A	]20:28824721]A	9	PASS	DISC_MAPQ=29;EVDNC=ASDIS;HOMSEQ=ACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAG;MAPQ=60;MATEID=869859:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_20_28812001_28837001_824C;SPAN=9287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:271:9.7:9.7,0,673.1:22:4:-9.65:49.49
20	28824450	869856:2	T	]20:28815225]T	0	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TATGTGAAGATATTTCC;MAPQ=60;MATEID=869856:1;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_20_28812001_28837001_258C;SPAN=9225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:243:15.1:0,15.1,640.3:10:9:15.49:27.73
20	28824721	869859:2	G	G[20:28815434[	9	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAG;MAPQ=60;MATEID=869859:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_20_28812001_28837001_824C;SPAN=9287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:271:9.7:9.7,0,673.1:22:4:-9.65:49.49
20	28835228	869771:2	T	T[10:39496326[	22	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=869771:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39496326(-)-20:28835228(+)__20_28812001_28837001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25
20	28840026	870053:1	T	T[20:28841515[	0	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=870053:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28840026(+)-20:28841515(-)__20_28836501_28861501D;SPAN=1489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:11:160:8.5:0,8.5,419.2:0:11:8.664:19.28
20	28840894	870075:1	G	]20:29152583]G	47	PASS	DISC_MAPQ=12;EVDNC=ASDIS;HOMSEQ=GTGGAGAAGGAAATATCTTCACATAAAAACTATGCAGAAGCATTCTGAGAAAC;MAPQ=44;MATEID=870075:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_28836501_28861501_26C;SPAN=311689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:44:47:47,0,63.5:13:5:-47.05:47.19
20	28841515	870053:2	G	]20:28840026]G	0	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=870053:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28840026(+)-20:28841515(-)__20_28836501_28861501D;SPAN=1489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:11:160:8.5:0,8.5,419.2:0:11:8.664:19.28
20	28859998	870106:1	T	]20:28860195]T	66	PASS	EVDNC=ASSMB;HOMSEQ=TCACACATCACAAAGAAGTTTCTCAGA;MAPQ=60;MATEID=870106:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_116C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:46:46.7:66.5,0,46.7:24:0:-66.42:66.42
20	28860195	870106:2	A	A[20:28859998[	66	PASS	EVDNC=ASSMB;HOMSEQ=TCACACATCACAAAGAAGTTTCTCAGA;MAPQ=60;MATEID=870106:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_116C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:46:46.7:66.5,0,46.7:24:0:-66.42:66.42
20	28861335	870221:1	A	A[20:28868471[	46	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=870221:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28861335(+)-20:28868471(-)__20_28861001_28886001D;SPAN=7136;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:11:4.2:46.2,4.2,0:0:16:-46.21:46.21
20	28868471	870221:2	T	]20:28861335]T	46	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=870221:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28861335(+)-20:28868471(-)__20_28861001_28886001D;SPAN=7136;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:11:4.2:46.2,4.2,0:0:16:-46.21:46.21
20	28897172	870531:1	T	T[20:29189810[	42	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=870531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28897172(+)-20:29189810(-)__20_28885501_28910501D;SPAN=292638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:26:22.4:42.2,0,22.4:0:15:-42.5:42.5
20	29062721	873050:1	G	G]20:29515167]	37	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=873050:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29062721(+)-20:29515167(+)__20_29498001_29523001D;SPAN=452446;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:0:14:-36.94:36.99
20	29088471	870919:2	T	]4:189948866]T	3	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=870919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:189948866(+)-20:29088471(-)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:81:3.8:3.8,0,198.5:0:8:-3.64:15.33
20	29090598	870923:2	G	G]9:63843968]	39	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=870923:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:63843968(+)-20:29090598(+)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:83:39.5:39.5,0,168.2:0:19:-39.39:43.98
20	29130127	871760:1	A	]20:29193597]A	23	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=871760:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29130127(-)-20:29193597(+)__20_29179501_29204501D;SPAN=63470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
20	29152222	871389:1	A	]20:29152743]A	36	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=871389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29152222(-)-20:29152743(+)__20_29130501_29155501D;SPAN=521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
20	29152583	870075:2	C	C[20:28840894[	47	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GTGGAGAAGGAAATATCTTCACATAAAAACTATGCAGAAGCATTCTGAGAAAC;MAPQ=60;MATEID=870075:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_26C;SPAN=311689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:44:47:47,0,63.5:13:5:-47.05:47.19
20	29152743	871389:2	T	T[20:29152222[	36	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=871389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29152222(-)-20:29152743(+)__20_29130501_29155501D;SPAN=521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
20	29155988	871853:1	T	T[20:29187554[	75	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871853:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29155988(+)-20:29187554(-)__20_29179501_29204501D;SPAN=31566;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92
20	29164587	872074:1	T	T[20:29203980[	23	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=872074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29164587(+)-20:29203980(-)__20_29204001_29229001D;SPAN=39393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11
20	29174443	871670:1	A	A[20:29196966[	42	PASS	DISC_MAPQ=29;EVDNC=ASDIS;HOMSEQ=ATAAAAACTACACAGAAGCATTCTGA;MAPQ=28;MATEID=871670:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29155001_29180001_171C;SPAN=22523;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91
20	29187554	871853:2	T	]20:29155988]T	75	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871853:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29155988(+)-20:29187554(-)__20_29179501_29204501D;SPAN=31566;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92
20	29189810	870531:2	G	]20:28897172]G	42	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=870531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28897172(+)-20:29189810(-)__20_28885501_28910501D;SPAN=292638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:26:22.4:42.2,0,22.4:0:15:-42.5:42.5
20	29193222	871987:1	A	]20:29193786]A	27	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=871987:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29193222(-)-20:29193786(+)__20_29179501_29204501D;SPAN=564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
20	29193597	871760:2	G	G[20:29130127[	23	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871760:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29130127(-)-20:29193597(+)__20_29179501_29204501D;SPAN=63470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
20	29193786	871987:2	G	G[20:29193222[	27	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=871987:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29193222(-)-20:29193786(+)__20_29179501_29204501D;SPAN=564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
20	29196966	871670:2	A	]20:29174443]A	42	PASS	DISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=ATAAAAACTACACAGAAGCATTCTGA;MAPQ=60;MATEID=871670:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29155001_29180001_171C;SPAN=22523;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91
20	29203980	872074:2	C	]20:29164587]C	23	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=872074:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29164587(+)-20:29203980(-)__20_29204001_29229001D;SPAN=39393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11
20	29204766	874418:1	N	[20:29888901[N	99	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=874418:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29204766(-)-20:29888901(-)__20_29865501_29890501D;SPAN=684135;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:8:18.9:207.9,18.9,0:0:68:-208:208
20	29213586	872096:1	A	A[20:29213887[	85	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAA;MAPQ=60;MATEID=872096:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_29204001_29229001_118C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:38:9.2:85.1,0,9.2:22:9:-88.4:88.4
20	29213887	872096:2	G	]20:29213586]G	85	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAA;MAPQ=60;MATEID=872096:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_29204001_29229001_118C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:38:9.2:85.1,0,9.2:22:9:-88.4:88.4
20	29214602	872097:1	A	]20:29215222]A	24	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=872097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29214602(-)-20:29215222(+)__20_29204001_29229001D;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
20	29215222	872097:2	A	A[20:29214602[	24	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=872097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29214602(-)-20:29215222(+)__20_29204001_29229001D;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
20	29224086	872116:1	T	]20:29224489]T	23	PASS	DISC_MAPQ=27;EVDNC=ASDIS;HOMSEQ=TCTGCAAAGGGATATTTGTGAGTGCTTTGAGGCCTATGGTGAAACAGGAAATATCTTCAC;MAPQ=60;MATEID=872116:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_29204001_29229001_43C;SPAN=403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:70:23.3:23.3,0,152:11:10:-23.24:28.76
20	29224489	872116:2	C	C[20:29224086[	23	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TCTGCAAAGGGATATTTGTGAGTGCTTTGAGGCCTATGGTGAAACAGGAAATATCTTCAC;MAPQ=60;MATEID=872116:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_29204001_29229001_43C;SPAN=403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:70:23.3:23.3,0,152:11:10:-23.24:28.76
20	29258255	872237:1	A	A]20:29888628]	39	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=872237:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29258255(+)-20:29888628(+)__20_29253001_29278001D;SPAN=630373;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:0:14:-39.39:39.39
20	29294840	872375:1	A	A[20:30482683[	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=872375:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29294840(+)-20:30482683(-)__20_29277501_29302501D;SPAN=1187843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42
20	29375944	168761:2	G	[3:75703640[G	66	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=168761:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75703640(-)-20:29375944(-)__3_75680501_75705501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:26:0.6:66,0.6,0:0:22:-69.34:69.34
20	29407505	872869:2	A	[3:75673010[A	33	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=872869:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75673010(-)-20:29407505(-)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:45:33.5:33.5,0,79.7:0:14:-33.57:34.6
20	29412524	168580:2	N	N]3:75668011]	37	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=168580:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75668011(+)-20:29412524(+)__3_75656001_75681001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:44:37.1:37.1,0,73.4:0:15:-37.15:37.81
20	29418432	872855:2	T	T]3:75662822]	23	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=872855:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75662822(+)-20:29418432(+)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
20	29515167	873050:2	G	G]20:29062721]	37	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=873050:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29062721(+)-20:29515167(+)__20_29498001_29523001D;SPAN=452446;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:0:14:-36.94:36.99
20	29565353	875088:1	N	[20:30318846[N	23	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=875088:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29565353(-)-20:30318846(-)__20_30306501_30331501D;SPAN=753493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
20	29636132	873198:2	T	]9:61735346]T	36	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=873198:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:61735346(+)-20:29636132(-)__20_29620501_29645501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66
20	29700083	873591:1	A	A[20:29703090[	26	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=873591:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29700083(+)-20:29703090(-)__20_29694001_29719001D;SPAN=3007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
20	29703090	873591:2	G	]20:29700083]G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=873591:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29700083(+)-20:29703090(-)__20_29694001_29719001D;SPAN=3007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
20	29836455	874088:1	A	A[20:29837181[	5	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=874088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29816501_29841501_464C;SPAN=726;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
20	29837181	874088:2	A	]20:29836455]A	5	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=874088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29816501_29841501_464C;SPAN=726;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
20	29851924	908592:1	G	]22:11373695]G	61	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAG;MAPQ=60;MATEID=908592:2;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_22_11368001_11393001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:41:41.3:61.1,0,41.3:9:14:-61.28:61.28
20	29888628	872237:2	T	T]20:29258255]	39	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=872237:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29258255(+)-20:29888628(+)__20_29253001_29278001D;SPAN=630373;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:0:14:-39.39:39.39
20	29888901	874418:2	A	[20:29204766[A	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=874418:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29204766(-)-20:29888901(-)__20_29865501_29890501D;SPAN=684135;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:8:18.9:207.9,18.9,0:0:68:-208:208
20	29983825	874677:1	A	A[20:30140273[	99	PASS	DISC_MAPQ=48;EVDNC=TSI_L;HOMSEQ=AAAGGAAATATCTTCACATAAAAACTAGACAGA;MAPQ=56;MATEID=874677:2;MATENM=11;NM=1;NUMPARTS=3;SCTG=c_20_29963501_29988501_205C;SPAN=156448;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:87:26:24.3:267.3,24.3,0:71:25:-267.4:267.4
20	30140273	874677:2	A	]20:29983825]A	99	PASS	DISC_MAPQ=11;EVDNC=TSI_L;HOMSEQ=AAAGGAAATATCTTCACATAAAAACTAGACAGA;MAPQ=33;MATEID=874677:1;MATENM=1;NM=11;NUMPARTS=3;SCTG=c_20_29963501_29988501_205C;SPAN=156448;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:87:26:24.3:267.3,24.3,0:71:25:-267.4:267.4
20	30318846	875088:2	G	[20:29565353[G	23	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=875088:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29565353(-)-20:30318846(-)__20_30306501_30331501D;SPAN=753493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
20	30482683	872375:2	T	]20:29294840]T	23	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=872375:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29294840(+)-20:30482683(-)__20_29277501_29302501D;SPAN=1187843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42
20	30502676	875478:2	G	]2:132270852]G	59	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=875478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132270852(+)-20:30502676(-)__20_30502501_30527501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:0:18:-58.15:58.15
20	30594240	998499:1	G	]Un_JTFH01000605v1_decoy:968]G	29	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=998499:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_1448_1_1389_5C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
20	30926139	876115:2	T	[19:27365941[T	68	PASS	DISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=TGCATATTCTACAGAAAGACTGTTTCCAAA;MAPQ=19;MATEID=876115:1;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=TT;SCTG=c_20_30919001_30944001_257C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:98:68.3:68.3,0,177.2:26:4:-68.18:70.92
20	31487269	878350:1	G	]20:31768542]G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=878350:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_31752001_31777001_19C;SPAN=281273;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:15:8:-49.51:49.51
20	31768542	878350:2	G	G[20:31487269[	49	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=878350:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_31752001_31777001_19C;SPAN=281273;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:15:8:-49.51:49.51
20	32723074	878580:1	G	G[20:32724972[	66	PASS	EVDNC=ASSMB;HOMSEQ=AAAGACTTGTG;MAPQ=60;MATEID=878580:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_20_32707501_32732501_73C;SPAN=1898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:11:6:66,6,0:22:0:-66.02:66.02
20	32724972	878580:2	A	]20:32723074]A	66	PASS	EVDNC=ASSMB;HOMSEQ=AAAGACTTGTG;MAPQ=60;MATEID=878580:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_20_32707501_32732501_73C;SPAN=1898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:11:6:66,6,0:22:0:-66.02:66.02
20	34228132	878957:1	C	C[20:34231420[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGAACTTTC;MAPQ=60;MATEID=878957:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34226501_34251501_29C;SPAN=3288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:15:1244:99:0,299.7,3733:10:9:300.2:14.95
20	34231420	878957:2	T	]20:34228132]T	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGAACTTTC;MAPQ=60;MATEID=878957:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34226501_34251501_29C;SPAN=3288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:15:1244:99:0,299.7,3733:10:9:300.2:14.95
20	34528026	879054:1	T	T[20:34528340[	27	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTACCCTACTGGAGT;MAPQ=60;MATEID=879054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34520501_34545501_37C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
20	34528340	879054:2	A	]20:34528026]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTACCCTACTGGAGT;MAPQ=60;MATEID=879054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34520501_34545501_37C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
20	35033863	879169:1	A	A[20:35034175[	17	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGTAAA;MAPQ=60;MATEID=879169:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_35010501_35035501_48C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:43:17.6:17.6,0,90.2:9:0:-17.62:20.44
20	35034175	879169:2	A	]20:35033863]A	17	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGTAAA;MAPQ=60;MATEID=879169:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_35010501_35035501_48C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:43:17.6:17.6,0,90.2:9:0:-17.62:20.44
20	35041059	879174:1	A	]20:35041155]A	8	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879174:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35035001_35060001_27C;SPAN=96;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:27:8.9:8.9,0,58.4:5:0:-8.916:11.05
20	35041155	879174:2	A	A[20:35041059[	8	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879174:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35035001_35060001_27C;SPAN=96;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:27:8.9:8.9,0,58.4:5:0:-8.916:11.05
20	35564373	879364:1	A	]20:35564522]A	52	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35549501_35574501_16C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:48:52.7:52.7,0,65.9:20:0:-52.53:52.64
20	35564522	879364:2	A	A[20:35564373[	52	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35549501_35574501_16C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:48:52.7:52.7,0,65.9:20:0:-52.53:52.64
20	38793597	880214:1	C	]20:38793774]C	11	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=880214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_38783501_38808501_31C;SPAN=177;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:32:11:11,0,67.1:6:0:-10.81:13.3
20	38793774	880214:2	C	C[20:38793597[	11	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=880214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_38783501_38808501_31C;SPAN=177;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:32:11:11,0,67.1:6:0:-10.81:13.3
20	40861608	880606:2	G	[1:119717902[G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=880606:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_40841501_40866501_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:52:21:14.4:158.4,14.4,0:29:38:-158.4:158.4
20	40863081	880611:1	C	C[20:40871469[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=880611:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_20_40866001_40891001_69C;SPAN=8388;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
20	40871469	880611:2	T	]20:40863081]T	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=880611:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_20_40866001_40891001_69C;SPAN=8388;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
20	40888416	881229:1	G	]20:42600872]G	12	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=881229:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42581001_42606001_108C;SPAN=1712456;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05
20	41014579	880709:1	T	]20:41077934]T	33	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=880709:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41062001_41087001_8C;SPAN=63355;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77
20	41077934	880709:2	G	G[20:41014579[	33	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=880709:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41062001_41087001_8C;SPAN=63355;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77
20	41100800	880736:1	A	]20:41153377]A	37	PASS	EVDNC=ASSMB;INSERTION=TCATCTGCAGCCTCAAACCC;MAPQ=60;MATEID=880736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41135501_41160501_11C;SPAN=52577;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:54:37.7:37.7,0,97.1:16:0:-37.64:39.14
20	41153377	880736:2	C	C[20:41100800[	37	PASS	EVDNC=ASSMB;INSERTION=TCATCTGCAGCCTCAAACCC;MAPQ=60;MATEID=880736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41135501_41160501_11C;SPAN=52577;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:54:37.7:37.7,0,97.1:16:0:-37.64:39.14
20	41277735	880780:1	G	G[20:41278845[	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGG;MAPQ=60;MATEID=880780:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_41258001_41283001_45C;SPAN=1110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:50:13.8:151.8,13.8,0:28:32:-151.8:151.8
20	41278845	880780:2	T	]20:41277735]T	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGG;MAPQ=60;MATEID=880780:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_41258001_41283001_45C;SPAN=1110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:50:13.8:151.8,13.8,0:28:32:-151.8:151.8
20	42187003	881086:1	T	[20:57243066[T	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=881086:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42164501_42189501_4C;SPAN=15056063;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:50:22.4:101.6,0,22.4:17:25:-104.1:104.1
20	42213358	881105:1	T	]20:42215833]T	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=881105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:42213358(-)-20:42215833(+)__20_42213501_42238501D;SPAN=2475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:0:11:-23.94:25.95
20	42215833	881105:2	C	C[20:42213358[	23	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=881105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:42213358(-)-20:42215833(+)__20_42213501_42238501D;SPAN=2475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:0:11:-23.94:25.95
20	42220432	881117:1	C	]20:42244661]C	58	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=881117:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42238001_42263001_7C;SPAN=24229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:40:41.6:58.1,0,41.6:21:0:-58.2:58.2
20	42241304	883732:1	G	]20:49308943]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=883732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_43C;SPAN=7067639;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:34:9.3:102.3,9.3,0:31:0:-100.8:100.8
20	42244661	881117:2	C	C[20:42220432[	58	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=881117:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42238001_42263001_7C;SPAN=24229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:40:41.6:58.1,0,41.6:21:0:-58.2:58.2
20	42374557	881140:2	C	[17:58625792[C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=881140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42360501_42385501_15C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:34:13.5:148.5,13.5,0:31:28:-148.5:148.5
20	42447943	881169:2	T	]1:114822463]T	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=881169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42434001_42459001_33C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:51:41:14.1:155.1,14.1,0:51:0:-155.1:155.1
20	42600872	881229:2	T	T[20:40888416[	12	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=881229:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42581001_42606001_108C;SPAN=1712456;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05
20	42679541	881265:2	G	G[1:119844586[	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881265:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_42679001_42704001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:27:11.1:122.1,11.1,0:40:0:-122.1:122.1
20	43396070	881430:1	T	T[20:43397151[	89	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=881430:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43396070(+)-20:43397151(-)__20_43389501_43414501D;SPAN=1081;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12
20	43397151	881430:2	A	]20:43396070]A	89	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=881430:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43396070(+)-20:43397151(-)__20_43389501_43414501D;SPAN=1081;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12
20	43568137	881500:1	G	]20:50015936]G	62	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881500:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43561001_43586001_0C;SPAN=6447799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:21:5.7:62.7,5.7,0:20:0:-62.72:62.72
20	43595420	883769:1	G	]20:49349984]G	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GTGC;MAPQ=60;MATEID=883769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49343001_49368001_42C;SPAN=5754564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:28:9.9:108.9,9.9,0:26:24:-108.9:108.9
20	43643335	881547:1	A	A[20:43645931[	92	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=881547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43643335(+)-20:43645931(-)__20_43634501_43659501D;SPAN=2596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:1:8.4:92.4,8.4,0:0:30:-92.42:92.42
20	43645931	881547:2	C	]20:43643335]C	92	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=881547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43643335(+)-20:43645931(-)__20_43634501_43659501D;SPAN=2596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:1:8.4:92.4,8.4,0:0:30:-92.42:92.42
20	43696487	881586:1	C	]20:43697013]C	80	PASS	EVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=881586:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43683501_43708501_25C;SPAN=526;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76
20	43697013	881586:2	C	C[20:43696487[	80	PASS	EVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=881586:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43683501_43708501_25C;SPAN=526;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76
20	44025527	997507:1	G	]Un_JTFH01000380v1_decoy:1876]G	89	PASS	EVDNC=ASSMB;HOMSEQ=GCATCAGCTGCACCCCCACTCATGG;MAPQ=60;MATEID=997507:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1223_1_1876_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:8:8.1:89.1,8.1,0:29:0:-89.12:89.12
20	44677206	881853:1	T	T]20:44683574]	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=881853:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_44663501_44688501_46C;SPAN=6368;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:51:41.9:84.8,0,41.9:28:2:-85.4:85.4
20	44680251	881856:1	C	[20:44683268[C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CAGG;MAPQ=60;MATEID=881856:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_44663501_44688501_9C;SPAN=3017;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:55:7.7:129.8,0,7.7:33:16:-136.1:136.1
20	44683268	881856:2	C	[20:44680251[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGG;MAPQ=60;MATEID=881856:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_44663501_44688501_9C;SPAN=3017;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:55:7.7:129.8,0,7.7:33:16:-136.1:136.1
20	44683574	881853:2	G	G]20:44677206]	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=881853:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_44663501_44688501_46C;SPAN=6368;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:51:41.9:84.8,0,41.9:28:2:-85.4:85.4
20	47141443	886074:1	T	[20:55582440[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=886074:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_55566001_55591001_12C;SPAN=8440997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:115:158:61.4:335.3,0,61.4:71:81:-345.8:345.8
20	47143282	882804:2	T	T[17:61924313[	99	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=882804:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:119:99:118.4,0,181.1:46:0:-118.4:119.1
20	47143403	882813:1	T	T[20:47149693[	42	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=882813:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:47143403(+)-20:47149693(-)__20_47138001_47163001D;SPAN=6290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:73:42.2:42.2,0,141.2:0:19:-42.2:45.21
20	47149693	882813:2	A	]20:47143403]A	42	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=882813:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:47143403(+)-20:47149693(-)__20_47138001_47163001D;SPAN=6290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:73:42.2:42.2,0,141.2:0:19:-42.2:45.21
20	47149699	882806:2	A	]17:61924536]A	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=882806:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_44C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:88:79:24.6:270.6,24.6,0:20:79:-270.7:270.7
20	47150452	882808:2	A	A[17:62000916[	99	PASS	EVDNC=ASSMB;HOMSEQ=CCA;MAPQ=60;MATEID=882808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:62:129:99:168.5,0,155.3:62:0:-168.4:168.4
20	47156833	882810:2	A	]17:63002553]A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=882810:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_67C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:71:137:99:196.1,0,146.6:71:0:-196.2:196.2
20	47159653	889878:1	A	A[20:63657381[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=889878:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_63651001_63676001_40C;SPAN=16497728;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:72:160:99:192.8,0,209.3:72:0:-192.7:192.7
20	47170985	25102:2	T	[1:107091117[T	43	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=25102:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107089501_107114501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:106:43.1:43.1,0,221.3:12:17:-42.83:49.86
20	47190406	503963:2	G	]9:88385279]G	35	PASS	EVDNC=ASSMB;INSERTION=CAAAGCTAAAAAATGTAGG;MAPQ=60;MATEID=503963:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_88371501_88396501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:13:0:-35.04:35.04
20	47231949	164115:2	C	]3:61900033]C	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GA;MAPQ=60;MATEID=164115:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_61887001_61912001_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:74:0.9:0,0.9,188.1:4:3:0.9948:10.96
20	47378938	188279:2	A	[3:124690602[A	49	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=188279:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_124680501_124705501_76C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:7:12:-50.34:50.34
20	47414043	25634:2	G	]1:108106953]G	76	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=25634:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_99C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:46:36.8:76.4,0,36.8:27:0:-76.82:76.82
20	47506404	24780:2	A	A[1:106530936[	41	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=24780:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106526001_106551001_55C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:89:41:41,0,182.9:20:0:-41:46.11
20	47575486	883062:1	C	[20:48174860[C	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GCCAGATGGCCAGTTCCCA;MAPQ=60;MATEID=883062:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_48167001_48192001_41C;SPAN=599374;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:118:13.2:0,13.2,323.4:4:2:13.36:9.71
20	47782526	882837:2	G	G[8:100064021[	63	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=882837:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47775001_47800001_26C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:116:63.2:63.2,0,228.2:20:27:-63.12:68.41
20	47786130	882842:1	G	[20:53583543[G	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=882842:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47775001_47800001_30C;SPAN=5797413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:128:17:17,0,304.1:12:7:-16.84:32.4
20	47787044	25218:2	A	]1:107264508]A	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=CATGACAGGACAGGAGGCTGGGGGGAA;MAPQ=60;MATEID=25218:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_107261001_107286001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:143:23.5:0,23.5,405.9:2:3:23.69:7.268
20	47911413	884570:1	G	[20:51227568[G	36	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=884570:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_20_51205001_51230001_24C;SPAN=3316155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:46:36.8:36.8,0,76.4:12:4:-36.59:37.45
20	47926746	885085:1	T	]20:52041378]T	37	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=885085:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52038001_52063001_110C;SPAN=4114632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
20	47941032	884572:1	C	]20:51228057]C	29	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=884572:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51205001_51230001_7C;SPAN=3287025;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:47:29.9:29.9,0,86:13:0:-29.7:31.34
20	48030664	27803:2	T	T[1:114491354[	0	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=27803:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_114488501_114513501_55C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:130:13.2:0,13.2,353.1:7:0:13.44:11.51
20	48030700	882999:1	A	[20:53920058[A	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=882999:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48020001_48045001_102C;SPAN=5889358;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:158:21.1:0,21.1,439:7:2:21.31:10.9
20	48074545	883036:1	T	]20:48105807]T	8	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=883036:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48093501_48118501_5C;SPAN=31262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:146:8.6:8.6,0,358.4:15:0:-8.476:29.02
20	48074953	883008:2	A	A[1:106630185[	10	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=883008:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48069001_48094001_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:153:10:10,0,373.1:13:6:-9.809:31.08
20	48085502	883009:2	A	[1:116254645[A	1	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCT;MAPQ=60;MATEID=883009:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48069001_48094001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:147:1.6:1.6,0,368:8:9:-1.593:24.26
20	48105807	883036:2	A	A[20:48074545[	8	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=883036:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48093501_48118501_5C;SPAN=31262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:146:8.6:8.6,0,358.4:15:0:-8.476:29.02
20	48174860	883062:2	T	[20:47575486[T	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCCAGATGGCCAGTTCCCA;MAPQ=60;MATEID=883062:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_48167001_48192001_41C;SPAN=599374;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:118:13.2:0,13.2,323.4:4:2:13.36:9.71
20	48502384	883254:1	C	C[20:48502814[	0	PASS	EVDNC=ASSMB;HOMSEQ=GCACCGGCTCTTCCCAGGATCTCCAGC;MAPQ=60;MATEID=883254:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48485501_48510501_80C;SPAN=430;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:10:190:20.2:0,20.2,518.2:10:0:20.4:16.34
20	48502814	883254:2	G	]20:48502384]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GCACCGGCTCTTCCCAGGATCTCCAGC;MAPQ=60;MATEID=883254:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48485501_48510501_80C;SPAN=430;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:10:190:20.2:0,20.2,518.2:10:0:20.4:16.34
20	48827701	883494:2	G	[3:195886346[G	1	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTACTT;MAPQ=60;MATEID=883494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48804001_48829001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:55:1.1:1.1,0,136.4:3:3:-1.045:9.394
20	48883196	27990:2	A	[1:114692386[A	2	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=27990:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_114684501_114709501_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:120:2.6:2.6,0,299.6:8:7:-2.58:20.71
20	49298635	885111:1	C	[20:52063701[C	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=885111:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52062501_52087501_16C;SPAN=2765066;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:38:13.5:148.5,13.5,0:27:34:-148.5:148.5
20	49308943	883732:2	A	A[20:42241304[	99	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=883732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_43C;SPAN=7067639;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:34:9.3:102.3,9.3,0:31:0:-100.8:100.8
20	49309026	883730:2	A	]1:113786165]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AGAT;MAPQ=60;MATEID=883730:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
20	49325638	883756:1	T	]20:49325721]T	73	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACAGGGTTATTAGATGGATGTTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACGGGGTTATTAGATGGA;MAPQ=60;MATEID=883756:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_20_49318501_49343501_41C;SPAN=83;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:104:73.1:73.1,0,188.6:31:0:-73.1:75.93
20	49325721	883756:2	G	G[20:49325638[	73	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACAGGGTTATTAGATGGATGTTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACGGGGTTATTAGATGGA;MAPQ=60;MATEID=883756:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_20_49318501_49343501_41C;SPAN=83;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:104:73.1:73.1,0,188.6:31:0:-73.1:75.93
20	49349984	883769:2	C	C[20:43595420[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGC;MAPQ=60;MATEID=883769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49343001_49368001_42C;SPAN=5754564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:28:9.9:108.9,9.9,0:26:24:-108.9:108.9
20	49351536	885112:1	T	[20:52068428[T	70	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=885112:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52062501_52087501_17C;SPAN=2716892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:19:10:-73.47:73.47
20	49875445	883982:2	G	[17:82953195[G	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=883982:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49857501_49882501_45C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:31:8.7:95.7,8.7,0:24:12:-95.72:95.72
20	50015936	881500:2	G	G[20:43568137[	62	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881500:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43561001_43586001_0C;SPAN=6447799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:21:5.7:62.7,5.7,0:20:0:-62.72:62.72
20	50110068	884135:2	G	[17:61398559[G	17	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=884135:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_50102501_50127501_30C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:4:6:-16.85:18.63
20	50678547	889981:1	G	[20:63864221[G	44	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=889981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63847001_63872001_13C;SPAN=13185674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:29:28.1:44.6,0,28.1:6:10:-44.86:44.86
20	50816138	884415:1	G	]20:50816769]G	75	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCAGCCTCCTGAGTAGCTGGGACTACAGAC;MAPQ=60;MATEID=884415:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_50813001_50838001_17C;SPAN=631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:73:75.2:75.2,0,108.2:29:0:-75.21:75.54
20	50816769	884415:2	C	C[20:50816138[	75	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCAGCCTCCTGAGTAGCTGGGACTACAGAC;MAPQ=60;MATEID=884415:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_50813001_50838001_17C;SPAN=631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:73:75.2:75.2,0,108.2:29:0:-75.21:75.54
20	51129425	884509:2	G	[1:107571647[G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=884509:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51107001_51132001_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:38:10.5:115.5,10.5,0:22:32:-114.4:114.4
20	51227568	884570:2	C	[20:47911413[C	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=884570:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_20_51205001_51230001_24C;SPAN=3316155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:46:36.8:36.8,0,76.4:12:4:-36.59:37.45
20	51228057	884572:2	T	T[20:47941032[	29	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=884572:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51205001_51230001_7C;SPAN=3287025;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:47:29.9:29.9,0,86:13:0:-29.7:31.34
20	51569452	889168:1	G	[20:62201797[G	24	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TATC;MAPQ=60;MATEID=889168:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_62181001_62206001_66C;SPAN=10632345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:7:8:-24.3:24.91
20	52003779	885044:2	A	A[17:75280201[	61	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=885044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51989001_52014001_51C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62
20	52041378	885085:2	T	T[20:47926746[	37	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=885085:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52038001_52063001_110C;SPAN=4114632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
20	52043400	885083:2	T	[9:75533771[T	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=885083:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_52038001_52063001_156C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:36:36.2:52.7,0,36.2:14:14:-52.72:52.72
20	52063701	885111:2	G	[20:49298635[G	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=885111:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52062501_52087501_16C;SPAN=2765066;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:38:13.5:148.5,13.5,0:27:34:-148.5:148.5
20	52068428	885112:2	A	[20:49351536[A	70	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=885112:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52062501_52087501_17C;SPAN=2716892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:19:10:-73.47:73.47
20	52142667	885142:1	C	C[20:52144390[	27	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=CAACATGGTGAAACCC;MAPQ=53;MATEID=885142:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52136001_52161001_39C;SPAN=1723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:7:6:-27.73:27.73
20	52144390	885142:2	C	]20:52142667]C	27	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CAACATGGTGAAACCC;MAPQ=60;MATEID=885142:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52136001_52161001_39C;SPAN=1723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:7:6:-27.73:27.73
20	53413597	885591:2	A	]1:107577023]A	69	PASS	EVDNC=ASSMB;INSERTION=GTAAATA;MAPQ=60;MATEID=885591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_53410001_53435001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
20	53431676	885592:2	T	[1:113786160[T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=885592:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_53410001_53435001_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:24:12.6:138.6,12.6,0:31:26:-138.6:138.6
20	53583543	882842:2	C	[20:47786130[C	17	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=882842:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47775001_47800001_30C;SPAN=5797413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:128:17:17,0,304.1:12:7:-16.84:32.4
20	53736867	27881:2	G	[1:114616011[G	5	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=27881:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_114611001_114636001_102C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:145:5.6:5.6,0,358.7:9:8:-5.456:26.69
20	53847498	164629:2	T	]3:62865005]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=164629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62842501_62867501_139C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:82:46.4:46.4,0,158.6:21:0:-46.27:49.79
20	53866284	805985:2	A	A[17:47670040[	23	PASS	EVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=805985:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_47652501_47677501_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
20	53882695	903694:1	C	[21:38009271[C	85	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=903694:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_37999501_38024501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:22:7.8:85.8,7.8,0:14:18:-85.82:85.82
20	53920058	882999:2	T	[20:48030700[T	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=882999:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48020001_48045001_102C;SPAN=5889358;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:158:21.1:0,21.1,439:7:2:21.31:10.9
20	54159808	408662:2	C	C[7:79131175[	34	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=408662:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79110501_79135501_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03
20	54727260	164077:2	T	[3:61807360[T	15	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TTTACA;MAPQ=60;MATEID=164077:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_61789001_61814001_51C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:98:15.5:15.5,0,230:9:8:-15.37:26.69
20	54778249	164561:2	T	[3:62727512[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=164561:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_62720001_62745001_150C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:40:78:83.9:110.3,0,83.9:29:24:-110.3:110.3
20	54940897	811695:2	T	T[17:64310797[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CAACAAATGTTTATTGAGTTTATACTATAAACCTTCTCCTCTTTCCTTTGCTGACTCTCTGCCTGGAACT;MAPQ=60;MATEID=811695:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_64288001_64313001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:118:103:33:363,33,0:118:0:-363.1:363.1
20	55576908	886070:2	T	]17:61909172]T	99	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=886070:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_55566001_55591001_71C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:167:99:151.4,0,266.9:60:0:-151.1:152.9
20	55582440	886074:2	G	[20:47141443[G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=886074:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_55566001_55591001_12C;SPAN=8440997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:115:158:61.4:335.3,0,61.4:71:81:-345.8:345.8
20	55583060	886095:1	G	G]20:55586393]	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=886095:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:55583060(+)-20:55586393(+)__20_55566001_55591001D;SPAN=3333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:58:71:6.5:171.5,0,6.5:0:58:-180.6:180.6
20	55584209	886073:2	T	[17:62017132[T	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TCAA;MAPQ=60;MATEID=886073:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_55566001_55591001_45C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:74:124:99:209.6,0,100.7:41:53:-211.4:211.4
20	55586393	886095:2	A	A]20:55583060]	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=886095:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:55583060(+)-20:55586393(+)__20_55566001_55591001D;SPAN=3333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:58:71:6.5:171.5,0,6.5:0:58:-180.6:180.6
20	55808995	948815:1	T	]X:155159534]T	66	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=948815:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:55808995(-)-23:155159534(+)__23_155158501_155183501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:17:6:66,6,0:0:22:-66.02:66.02
20	55858690	886287:2	C	C[8:138020879[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=886287:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_55835501_55860501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:6:8:-22.05:23.72
20	55859567	886298:1	G	G[20:55865561[	99	PASS	EVDNC=ASSMB;HOMSEQ=AATAAATTTGTGG;MAPQ=60;MATEID=886298:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_20_55860001_55885001_11C;SPAN=5994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:60:63:17.4:191.4,17.4,0:60:0:-191.4:191.4
20	55865561	886298:2	A	]20:55859567]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AATAAATTTGTGG;MAPQ=60;MATEID=886298:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_20_55860001_55885001_11C;SPAN=5994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:60:63:17.4:191.4,17.4,0:60:0:-191.4:191.4
20	56814070	886767:1	T	T[20:56815236[	5	PASS	EVDNC=ASSMB;HOMSEQ=TTTGAGACAGAGTCT;MAPQ=60;MATEID=886767:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_56791001_56816001_0C;SPAN=1166;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:76:5.3:5.3,0,183.5:8:0:-5.045:15.57
20	56815236	886767:2	T	]20:56814070]T	5	PASS	EVDNC=ASSMB;HOMSEQ=TTTGAGACAGAGTCT;MAPQ=60;MATEID=886767:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_56791001_56816001_0C;SPAN=1166;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:76:5.3:5.3,0,183.5:8:0:-5.045:15.57
20	56932721	887899:1	A	[20:59474085[A	30	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=887899:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_12C;SPAN=2541364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:56:30.5:30.5,0,109.7:10:7:-30.47:33.03
20	57100409	886924:2	C	]17:62965942]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=886924:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_57085001_57110001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:48:156:99:114.8,0,276.5:48:0:-114.6:118.4
20	57108067	57774:2	A	[1:214639551[A	62	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GTAG;MAPQ=60;MATEID=57774:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_214620001_214645001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:21:5.7:62.7,5.7,0:14:9:-62.72:62.72
20	57243066	881086:2	G	[20:42187003[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=881086:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42164501_42189501_4C;SPAN=15056063;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:50:22.4:101.6,0,22.4:17:25:-104.1:104.1
20	57463311	886988:2	T	]11:43634621]T	22	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=886988:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57452501_57477501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98
20	57974892	998965:1	C	C[Un_JTFH01000734v1_decoy:1[	93	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=998965:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=TCATCA;SCTG=c_1577_1_1214_0C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:11:10.7:93.6,10.7,0:39:0:-93.64:93.64
20	57997438	887220:2	A	]16:25844053]A	16	PASS	EVDNC=ASSMB;INSERTION=ACTCCAGCAGTTATGTACTATATATATATAT;MAPQ=60;MATEID=887220:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57991501_58016501_94C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77
20	58273305	887352:2	A	A[17:69309485[	15	PASS	EVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=887352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58261001_58286001_61C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78
20	58411089	887423:2	T	]1:198411139]T	7	PASS	EVDNC=ASSMB;INSERTION=AAGAAAC;MAPQ=60;MATEID=887423:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58408001_58433001_70C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:68:7.4:7.4,0,162.5:8:0:-7.294:15.98
20	58493483	887457:1	T	T]X:142905838]	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=887457:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_58481501_58506501_64C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:59:26.3:26.3,0,122:11:2:-26.33:29.85
20	58564979	887490:1	C	C[20:58565296[	0	PASS	EVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=887490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58555001_58580001_7C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:104:6:0,6,273.9:7:0:6.127:12.2
20	58565296	887490:2	C	]20:58564979]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=887490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58555001_58580001_7C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:104:6:0,6,273.9:7:0:6.127:12.2
20	59000016	887724:1	C	C[20:59000298[	0	PASS	EVDNC=ASSMB;HOMSEQ=AACCCGGGAGGCGGAGGTTGCAGTGAGC;MAPQ=60;MATEID=887724:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_20_58996001_59021001_31C;SPAN=282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:94:6.3:0,6.3,247.5:6:0:6.617:10.32
20	59000298	887724:2	A	]20:59000016]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AACCCGGGAGGCGGAGGTTGCAGTGAGC;MAPQ=60;MATEID=887724:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_20_58996001_59021001_31C;SPAN=282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:94:6.3:0,6.3,247.5:6:0:6.617:10.32
20	59473634	887898:2	C	[17:48813086[C	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=887898:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_31C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:48:13.1:13.1,0,105.5:4:6:-12.92:17.28
20	59474085	887899:2	T	[20:56932721[T	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=887899:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_12C;SPAN=2541364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:56:30.5:30.5,0,109.7:10:7:-30.47:33.03
20	59554986	887941:1	G	G[20:59640392[	21	PASS	EVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=887941:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59535001_59560001_9C;SPAN=85406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:9:0:-21.28:22.07
20	59640392	887941:2	C	]20:59554986]C	21	PASS	EVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=887941:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59535001_59560001_9C;SPAN=85406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:9:0:-21.28:22.07
20	60270342	888229:2	T	[17:61210341[T	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TGTG;MAPQ=60;MATEID=888229:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60270001_60295001_15C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:97:155:99:276.8,0,111.8:59:56:-280.3:280.3
20	60314398	888245:1	T	]20:60314900]T	4	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=888245:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:60314398(-)-20:60314900(+)__20_60294501_60319501D;SPAN=502;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:80:4.1:4.1,0,195.5:0:8:-3.921:15.38
20	60314900	888245:2	C	C[20:60314398[	4	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=888245:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:60314398(-)-20:60314900(+)__20_60294501_60319501D;SPAN=502;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:80:4.1:4.1,0,195.5:0:8:-3.921:15.38
20	60621324	888361:1	A	A[20:60622238[	0	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=888361:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60613001_60638001_18C;SPAN=914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:85:3.9:0,3.9,221.1:6:0:4.087:10.59
20	60622238	888361:2	A	]20:60621324]A	0	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=888361:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60613001_60638001_18C;SPAN=914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:85:3.9:0,3.9,221.1:6:0:4.087:10.59
20	61007224	888548:1	A	A[20:61030462[	24	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=888548:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_61029501_61054501_3C;SPAN=23238;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:42:24.5:24.5,0,80.6:11:0:-24.51:26.21
20	61030462	888548:2	C	]20:61007224]C	24	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=888548:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_61029501_61054501_3C;SPAN=23238;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:42:24.5:24.5,0,80.6:11:0:-24.51:26.21
20	61329284	888678:1	T	]20:61329445]T	99	PASS	EVDNC=ASSMB;INSERTION=TCGTGGGTCTGGGACGCGGGTCGAGGTGGC;MAPQ=60;MATEID=888678:2;MATENM=2;NM=5;NUMPARTS=2;SCTG=c_20_61323501_61348501_127C;SPAN=161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:151:99:99.5,0,281:43:0:-99.5:104.3
20	61329445	888678:2	C	C[20:61329284[	99	PASS	EVDNC=ASSMB;INSERTION=TCGTGGGTCTGGGACGCGGGTCGAGGTGGC;MAPQ=60;MATEID=888678:1;MATENM=5;NM=2;NUMPARTS=2;SCTG=c_20_61323501_61348501_127C;SPAN=161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:151:99:99.5,0,281:43:0:-99.5:104.3
20	61337291	888671:2	A	]1:7429774]A	16	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=888671:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:7429774(+)-20:61337291(-)__20_61323501_61348501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:59:16.4:16.4,0,131.9:0:10:-16.43:21.68
20	61529111	810968:2	A	A]17:62660892]	60	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=810968:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:62660892(+)-20:61529111(+)__17_62646501_62671501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:32:17.6:60.5,0,17.6:0:21:-61.42:61.42
20	61945453	889051:1	G	]20:61946491]G	28	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=889051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:61945453(-)-20:61946491(+)__20_61936001_61961001D;SPAN=1038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
20	61946491	889051:2	G	G[20:61945453[	28	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=889051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:61945453(-)-20:61946491(+)__20_61936001_61961001D;SPAN=1038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
20	62169401	889179:1	T	T]20:62211164]	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=889179:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:62169401(+)-20:62211164(+)__20_62205501_62230501D;SPAN=41763;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
20	62201797	889168:2	T	[20:51569452[T	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATC;MAPQ=60;MATEID=889168:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_62181001_62206001_66C;SPAN=10632345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:7:8:-24.3:24.91
20	62211164	889179:2	C	C]20:62169401]	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=889179:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:62169401(+)-20:62211164(+)__20_62205501_62230501D;SPAN=41763;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
21	6070645	891075:2	T	T]1:248752958]	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=891075:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:248752958(+)-21:6070645(+)__21_6051501_6076501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:2:2.4:26.4,2.4,0:0:9:-26.41:26.41
21	6374495	891103:1	G	G[21:6374996[	52	PASS	DISC_MAPQ=16;EVDNC=ASDIS;INSERTION=AGGGGCT;MAPQ=16;MATEID=891103:2;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_21_6370001_6395001_27C;SPAN=501;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:60:52.4:52.4,0,98.6:15:8:-52.46:53.23
21	6374996	891103:2	C	]21:6374495]C	52	PASS	DISC_MAPQ=10;EVDNC=ASDIS;INSERTION=AGGGGCT;MAPQ=44;MATEID=891103:1;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_21_6370001_6395001_27C;SPAN=501;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:60:52.4:52.4,0,98.6:15:8:-52.46:53.23
21	7957991	892538:2	C	C[20:28728974[	26	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=892538:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28728974(-)-21:7957991(+)__21_7938001_7963001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:81:26.9:26.9,0,175.4:0:15:-26.75:33.16
21	7969771	892860:2	G	[13:16013417[G	20	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=892860:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013417(-)-21:7969771(-)__21_7962501_7987501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36
21	9008766	893297:1	C	C[21:9019038[	28	PASS	EVDNC=ASSMB;INSERTION=ACACAATGGACAATG;MAPQ=60;MATEID=893297:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_9016001_9041001_175C;SPAN=10272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
21	9012539	893275:1	C	C[21:9015175[	29	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=893275:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:9012539(+)-21:9015175(-)__21_8991501_9016501D;SPAN=2636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:73:29:29,0,154.4:0:15:-29:33.92
21	9015175	893275:2	T	]21:9012539]T	29	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=893275:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:9012539(+)-21:9015175(-)__21_8991501_9016501D;SPAN=2636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:73:29:29,0,154.4:0:15:-29:33.92
21	9019038	893297:2	G	]21:9008766]G	28	PASS	EVDNC=ASSMB;INSERTION=ACACAATGGACAATG;MAPQ=44;MATEID=893297:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_9016001_9041001_175C;SPAN=10272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
21	9997182	894173:1	G	G[21:9997486[	38	PASS	DISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=AGATAATGCAGTAAGG;MAPQ=60;MATEID=894173:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_9996001_10021001_249C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:29:34.7:38,0,34.7:4:10:-38.07:38.07
21	9997486	894173:2	A	]21:9997182]A	38	PASS	DISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=AGATAATGCAGTAAGG;MAPQ=60;MATEID=894173:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_9996001_10021001_249C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:29:34.7:38,0,34.7:4:10:-38.07:38.07
21	10271538	894303:1	A	[21:10324402[A	36	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=894303:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10271538(-)-21:10324402(-)__21_10265501_10290501D;SPAN=52864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
21	10324402	894303:2	C	[21:10271538[C	36	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=894303:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10271538(-)-21:10324402(-)__21_10265501_10290501D;SPAN=52864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
21	10489827	895070:1	G	]22:45595928]G	35	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=895070:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10489827(-)-22:45595928(+)__21_10486001_10511001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63
21	10543018	895113:1	T	T[21:10543301[	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGACTGTATTCTTTT;MAPQ=60;MATEID=895113:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10535001_10560001_101C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:28:13.5:148.5,13.5,0:49:0:-148.5:148.5
21	10543301	895113:2	C	]21:10543018]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGACTGTATTCTTTT;MAPQ=60;MATEID=895113:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10535001_10560001_101C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:28:13.5:148.5,13.5,0:49:0:-148.5:148.5
21	10571807	895138:1	G	G[21:10572230[	0	PASS	EVDNC=ASSMB;HOMSEQ=ACTTGAGGCCAGGAGTTCAAG;MAPQ=60;MATEID=895138:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10559501_10584501_196C;SPAN=423;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:78:8.4:0,8.4,211.2:4:0:8.721:6.488
21	10572230	895138:2	A	]21:10571807]A	0	PASS	EVDNC=ASSMB;HOMSEQ=ACTTGAGGCCAGGAGTTCAAG;MAPQ=60;MATEID=895138:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10559501_10584501_196C;SPAN=423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:78:8.4:0,8.4,211.2:4:0:8.721:6.488
21	10664259	895599:1	T	T[21:10664824[	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCCATTCCATTGCATTCCATTCCATT;MAPQ=60;MATEID=895599:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_21_10657501_10682501_180C;SPAN=565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:117:9.6:0,9.6,313.5:7:0:9.781:11.83
21	10664824	895599:2	G	]21:10664259]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCCATTCCATTGCATTCCATTCCATT;MAPQ=60;MATEID=895599:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_21_10657501_10682501_180C;SPAN=565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:117:9.6:0,9.6,313.5:7:0:9.781:11.83
21	10722194	896148:1	T	T[21:10728890[	0	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=896148:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10722194(+)-21:10728890(-)__21_10706501_10731501D;SPAN=6696;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:161:15.4:0,15.4,435.7:0:9:15.55:14.94
21	10728890	896148:2	T	]21:10722194]T	0	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=896148:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10722194(+)-21:10728890(-)__21_10706501_10731501D;SPAN=6696;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:161:15.4:0,15.4,435.7:0:9:15.55:14.94
21	10789057	896677:2	T	T[13:16016553[	82	PASS	DISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=GAAGCATTCTGAGAAACTTCTTT;MAPQ=56;MATEID=896677:1;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_21_10780001_10805001_326C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:95:82.4:82.4,0,155:11:22:-82.23:83.51
21	10798083	896709:2	T	[20:28757851[T	0	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=896709:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28757851(-)-21:10798083(-)__21_10780001_10805001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:151:16:0,16,412.6:0:8:16.04:13.09
21	10807278	896848:1	T	T[21:10807788[	0	PASS	DISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=TTCT;MAPQ=60;MATEID=896848:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_10804501_10829501_120C;SPAN=510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:242:28:0,28,663.4:12:4:28.41:19.29
21	10807788	896848:2	T	]21:10807278]T	0	PASS	DISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=TTCT;MAPQ=27;MATEID=896848:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_10804501_10829501_120C;SPAN=510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:242:28:0,28,663.4:12:4:28.41:19.29
21	13444519	897143:1	T	T[21:13445846[	52	PASS	EVDNC=ASSMB;INSERTION=AAGTGCTACTACT;MAPQ=60;MATEID=897143:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_21_13426001_13451001_46C;SPAN=1327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81
21	13445846	897143:2	A	]21:13444519]A	52	PASS	EVDNC=ASSMB;INSERTION=AAGTGCTACTACT;MAPQ=60;MATEID=897143:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_21_13426001_13451001_46C;SPAN=1327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81
21	17240014	898019:1	A	A[21:17241316[	46	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=898019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_17223501_17248501_5C;SPAN=1302;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21
21	17241316	898019:2	A	]21:17240014]A	46	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=898019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_17223501_17248501_5C;SPAN=1302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21
21	18857736	898387:2	C	]4:76427327]C	23	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=898387:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:76427327(+)-21:18857736(-)__21_18840501_18865501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
21	21235316	899250:1	A	]21:21423970]A	91	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=899250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21413001_21438001_26C;SPAN=188654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:63:65:91.4,0,65:33:0:-91.41:91.41
21	21252378	899423:1	T	]21:22048768]T	19	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=899423:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_22025501_22050501_1C;SPAN=796390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:3:4:-19.89:19.89
21	21279138	899260:1	A	]21:21438423]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=899260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21437501_21462501_20C;SPAN=159285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:39:10.8:118.8,10.8,0:39:0:-118.8:118.8
21	21325912	899202:1	T	]21:21578930]T	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=899202:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21315001_21340001_25C;SPAN=253018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:61:19.4:19.4,0,131.6:8:4:-19.16:24.18
21	21423970	899250:2	C	C[21:21235316[	91	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=899250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21413001_21438001_26C;SPAN=188654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:63:65:91.4,0,65:33:0:-91.41:91.41
21	21438423	899260:2	G	G[21:21279138[	99	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=899260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21437501_21462501_20C;SPAN=159285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:39:10.8:118.8,10.8,0:39:0:-118.8:118.8
21	21461680	899338:1	T	]21:21629146]T	59	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=899338:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21609001_21634001_13C;SPAN=167466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:18:5.4:59.4,5.4,0:20:0:-59.41:59.41
21	21578930	899202:2	T	T[21:21325912[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=899202:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21315001_21340001_25C;SPAN=253018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:61:19.4:19.4,0,131.6:8:4:-19.16:24.18
21	21629146	899338:2	C	C[21:21461680[	59	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=899338:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21609001_21634001_13C;SPAN=167466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:18:5.4:59.4,5.4,0:20:0:-59.41:59.41
21	22048768	899423:2	A	A[21:21252378[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=899423:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_22025501_22050501_1C;SPAN=796390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:3:4:-19.89:19.89
21	24391796	900120:1	A	A]21:24391873]	29	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=A;MAPQ=60;MATEID=900120:2;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_21_24377501_24402501_17C;SPAN=77;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
21	24391873	900120:2	T	T]21:24391796]	29	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=A;MAPQ=60;MATEID=900120:1;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_21_24377501_24402501_17C;SPAN=77;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
21	26001844	900591:1	T	[21:26002386[T	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGATCCA;MAPQ=60;MATEID=900591:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_21_25994501_26019501_0C;SPAN=542;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:30:9.6:105.6,9.6,0:27:25:-105.6:105.6
21	26002386	900591:2	G	[21:26001844[G	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGATCCA;MAPQ=60;MATEID=900591:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_21_25994501_26019501_0C;SPAN=542;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:30:9.6:105.6,9.6,0:27:25:-105.6:105.6
21	26236436	900686:1	T	]21:26285100]T	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=900686:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:26236436(-)-21:26285100(+)__21_26264001_26289001D;SPAN=48664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
21	26285100	900686:2	T	T[21:26236436[	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=900686:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:26236436(-)-21:26285100(+)__21_26264001_26289001D;SPAN=48664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
21	31508958	902161:1	C	]21:31616501]C	25	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=CG;MAPQ=60;MATEID=902161:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_31605001_31630001_6C;SPAN=107543;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:7:8:-25.74:25.74
21	31616501	902161:2	G	G[21:31508958[	25	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=CG;MAPQ=60;MATEID=902161:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_31605001_31630001_6C;SPAN=107543;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:7:8:-25.74:25.74
21	34817147	902939:1	T	]21:34863048]T	92	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=902939:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_34839001_34864001_12C;SPAN=45901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:31:0:-92.42:92.42
21	34863048	902939:2	C	C[21:34817147[	92	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=902939:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_34839001_34864001_12C;SPAN=45901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:31:0:-92.42:92.42
21	38009271	903694:2	G	[20:53882695[G	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=903694:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_37999501_38024501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:22:7.8:85.8,7.8,0:14:18:-85.82:85.82
21	38913836	904003:2	A	[6:169996908[A	99	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=904003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_38906001_38931001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:51:18.3:201.3,18.3,0:61:10:-201.3:201.3
21	40028389	904491:1	T	[21:40033586[T	49	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=904491:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:40028389(-)-21:40033586(-)__21_40033001_40058001D;SPAN=5197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34
21	40033586	904491:2	T	[21:40028389[T	49	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=904491:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:40028389(-)-21:40033586(-)__21_40033001_40058001D;SPAN=5197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34
21	40348105	904567:1	A	]21:40348511]A	52	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=ATCAGCCACATTATTGCAATCATACCCCATACAGTTCCTATCAGCCACATTATTGCA;MAPQ=60;MATEID=904567:2;MATENM=12;NM=8;NUMPARTS=2;SCTG=c_21_40327001_40352001_0C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:72:52.4:52.4,0,128.3:17:5:-52.38:54.17
21	40348511	904567:2	A	A[21:40348105[	52	PASS	DISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=ATCAGCCACATTATTGCAATCATACCCCATACAGTTCCTATCAGCCACATTATTGCA;MAPQ=60;MATEID=904567:1;MATENM=8;NM=12;NUMPARTS=2;SCTG=c_21_40327001_40352001_0C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:72:52.4:52.4,0,128.3:17:5:-52.38:54.17
21	41805882	905116:1	C	]21:41806838]C	52	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CCTCCATCACTATCATTACCCTCATCACCACCA;MAPQ=60;MATEID=905116:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_41797001_41822001_60C;SPAN=956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:19:2:-51.89:52.86
21	41806838	905116:2	A	A[21:41805882[	52	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=CCTCCATCACTATCATTACCCTCATCACCACCA;MAPQ=60;MATEID=905116:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_41797001_41822001_60C;SPAN=956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:19:2:-51.89:52.86
21	41930128	905195:1	C	C[21:41933376[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=905195:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:41930128(+)-21:41933376(-)__21_41919501_41944501D;SPAN=3248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:61:12:16.8:184.8,16.8,0:0:61:-184.8:184.8
21	41933376	905195:2	A	]21:41930128]A	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=905195:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:41930128(+)-21:41933376(-)__21_41919501_41944501D;SPAN=3248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:61:12:16.8:184.8,16.8,0:0:61:-184.8:184.8
21	42994295	905513:1	G	]Un_JTFH01000298v1_decoy:2143]G	82	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAT;MAPQ=60;MATEID=905513:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_21_42973001_42998001_53C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:23:7.5:82.5,7.5,0:27:0:-82.52:82.52
21	44573789	905904:1	A	]21:44600671]A	19	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=905904:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:44573789(-)-21:44600671(+)__21_44565501_44590501D;SPAN=26882;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89
21	44600671	905904:2	G	G[21:44573789[	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=905904:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:44573789(-)-21:44600671(+)__21_44565501_44590501D;SPAN=26882;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89
21	44817900	906030:1	C	]21:45021320]C	45	PASS	EVDNC=ASSMB;INSERTION=ACAGCTCCAAGGGCCGCAGGAGCGGCGCGCGGCGGCGGAGGCGCC;MAPQ=60;MATEID=906030:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_45006501_45031501_13C;SPAN=203420;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5
21	45021320	906030:2	G	G[21:44817900[	45	PASS	EVDNC=ASSMB;INSERTION=ACAGCTCCAAGGGCCGCAGGAGCGGCGCGCGGCGGCGGAGGCGCC;MAPQ=60;MATEID=906030:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_45006501_45031501_13C;SPAN=203420;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5
21	45156011	906060:1	C	]21:45156432]C	34	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=906060:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_21_45153501_45178501_9C;SPAN=421;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:5:10:-35.24:35.24
21	45156432	906060:2	C	C[21:45156011[	34	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=0;MATEID=906060:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_21_45153501_45178501_9C;SPAN=421;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:5:10:-35.24:35.24
21	46289897	906534:1	G	]21:46290060]G	58	PASS	EVDNC=ASSMB;HOMSEQ=GTGTAAGGTTGTCATAGCCTTTGT;MAPQ=60;MATEID=906534:2;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_21_46280501_46305501_61C;SPAN=163;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:74:58.4:58.4,0,127.7:24:0:-58.42:59.85
21	46290060	906534:2	T	T[21:46289897[	58	PASS	EVDNC=ASSMB;HOMSEQ=GTGTAAGGTTGTCATAGCCTTTGT;MAPQ=59;MATEID=906534:1;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_21_46280501_46305501_61C;SPAN=163;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:74:58.4:58.4,0,127.7:24:0:-58.42:59.85
21	46359215	906568:1	A	A[21:46359740[	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAA;MAPQ=60;MATEID=906568:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_46354001_46379001_3C;SPAN=525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:14:12.3:135.3,12.3,0:28:29:-135.3:135.3
21	46359740	906568:2	G	]21:46359215]G	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAA;MAPQ=60;MATEID=906568:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_46354001_46379001_3C;SPAN=525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:14:12.3:135.3,12.3,0:28:29:-135.3:135.3
21	46382911	906579:1	T	]21:46384131]T	45	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=906579:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:46382911(-)-21:46384131(+)__21_46378501_46403501D;SPAN=1220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:62:45.5:45.5,0,108.2:0:19:-45.29:46.81
21	46384131	906579:2	C	C[21:46382911[	45	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=906579:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:46382911(-)-21:46384131(+)__21_46378501_46403501D;SPAN=1220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:62:45.5:45.5,0,108.2:0:19:-45.29:46.81
22	10717767	907105:1	T	T[22:10722199[	62	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=907105:2;MATENM=10;NM=23;NUMPARTS=2;REPSEQ=GTGT;SCTG=c_22_10706501_10731501_617C;SECONDARY;SPAN=4432;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:82:62.9:62.9,0,142.1:13:13:-62.78:64.53
22	10722199	907105:2	T	]22:10717767]T	62	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=0;MATEID=907105:1;MATENM=23;NM=10;NUMPARTS=2;REPSEQ=GTGT;SCTG=c_22_10706501_10731501_617C;SECONDARY;SPAN=4432;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:82:62.9:62.9,0,142.1:13:13:-62.78:64.53
22	10726871	907286:1	A	A[22:10728283[	76	PASS	EVDNC=ASSMB;HOMSEQ=ATTCCATTCCATTCGA;MAPQ=60;MATEID=907286:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_22_10706501_10731501_274C;SPAN=1412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:70:76.1:76.1,0,99.2:29:0:-76.05:76.24
22	10728262	907316:1	C	C[22:10729335[	29	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=907316:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10728262(+)-22:10729335(-)__22_10706501_10731501D;SPAN=1073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:96:29.3:29.3,0,210.8:0:17:-29.13:37.22
22	10728283	907286:2	A	]22:10726871]A	76	PASS	EVDNC=ASSMB;HOMSEQ=ATTCCATTCCATTCGA;MAPQ=60;MATEID=907286:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_22_10706501_10731501_274C;SPAN=1412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:70:76.1:76.1,0,99.2:29:0:-76.05:76.24
22	10729335	907316:2	T	]22:10728262]T	29	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=907316:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10728262(+)-22:10729335(-)__22_10706501_10731501D;SPAN=1073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:96:29.3:29.3,0,210.8:0:17:-29.13:37.22
22	10739861	907396:2	C	]10:125894203]C	44	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=907396:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125894203(+)-22:10739861(-)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:75:44.9:44.9,0,143.9:0:20:-44.94:47.83
22	10740444	907451:1	A	A[22:10746352[	32	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=907451:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10740444(+)-22:10746352(-)__22_10731001_10756001D;SPAN=5908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:51:32:32,0,94.7:0:14:-31.88:33.69
22	10741540	907397:2	G	G[10:125895950[	25	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=907397:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125895950(-)-22:10741540(+)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35
22	10746352	907451:2	G	]22:10740444]G	32	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=907451:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10740444(+)-22:10746352(-)__22_10731001_10756001D;SPAN=5908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:51:32:32,0,94.7:0:14:-31.88:33.69
22	11031172	907897:1	G	G[22:11032168[	79	PASS	EVDNC=ASSMB;INSERTION=CCACAA;MAPQ=60;MATEID=907897:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_22_11025001_11050001_283C;SPAN=996;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:71:79.1:79.1,0,98.9:30:0:-79.07:79.2
22	11032168	907897:2	A	]22:11031172]A	79	PASS	EVDNC=ASSMB;INSERTION=CCACAA;MAPQ=60;MATEID=907897:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_22_11025001_11050001_283C;SPAN=996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:71:79.1:79.1,0,98.9:30:0:-79.07:79.2
22	11317848	949339:1	T	[Y:10134946[T	66	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GAAACTAAAAGATTTTTAATATATAAGGTTATGTCATCTGCAAACAGATA;MAPQ=45;MATEID=949339:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_24_10118501_10143501_145C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:8:6:66,6,0:15:7:-66.02:66.02
22	11373695	908592:2	G	G[20:29851924[	61	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAG;MAPQ=60;MATEID=908592:1;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_22_11368001_11393001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:41:41.3:61.1,0,41.3:9:14:-61.28:61.28
22	12698698	910274:1	A	A[22:12699025[	70	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=AAAAGAATAA;MAPQ=60;MATEID=910274:2;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_22_12691001_12716001_689C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:91:70.4:70.4,0,156.2:14:15:-70.15:72.05
22	12699025	910274:2	A	]22:12698698]A	70	PASS	DISC_MAPQ=36;EVDNC=ASDIS;HOMSEQ=AAAAGAATAA;MAPQ=60;MATEID=910274:1;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_22_12691001_12716001_689C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:91:70.4:70.4,0,156.2:14:15:-70.15:72.05
22	16034697	910884:1	A	]22:16034865]A	48	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=910884:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_16023001_16048001_164C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74
22	16034865	910884:2	A	A[22:16034697[	48	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=910884:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_16023001_16048001_164C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74
22	16080720	911037:1	T	T[22:16084271[	46	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=911037:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:16080720(+)-22:16084271(-)__22_16072001_16097001D;SPAN=3551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
22	16084271	911037:2	G	]22:16080720]G	46	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=911037:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:16080720(+)-22:16084271(-)__22_16072001_16097001D;SPAN=3551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
22	17289460	912428:1	C	C[22:17298219[	59	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=912428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17297001_17322001_39C;SPAN=8759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41
22	17298219	912428:2	C	]22:17289460]C	59	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=912428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17297001_17322001_39C;SPAN=8759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41
22	17801149	912594:1	T	T[22:17801453[	15	PASS	EVDNC=ASSMB;HOMSEQ=TCCTGAGTTTCCTTTTTCT;MAPQ=60;MATEID=912594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17787001_17812001_113C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24
22	17801453	912594:2	T	]22:17801149]T	15	PASS	EVDNC=ASSMB;HOMSEQ=TCCTGAGTTTCCTTTTTCT;MAPQ=60;MATEID=912594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17787001_17812001_113C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24
22	18036248	912659:1	T	]22:18077776]T	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCCTCCATTAACATTAACAT;MAPQ=60;MATEID=912659:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_18056501_18081501_85C;SPAN=41528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:10:9:-42.91:42.91
22	18077776	912659:2	A	A[22:18036248[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCCTCCATTAACATTAACAT;MAPQ=60;MATEID=912659:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_18056501_18081501_85C;SPAN=41528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:10:9:-42.91:42.91
22	19584096	913224:1	C	C[22:19585579[	92	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=52;MATEID=913224:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_22_19575501_19600501_112C;SPAN=1483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42
22	19585579	913224:2	C	]22:19584096]C	92	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=913224:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_22_19575501_19600501_112C;SPAN=1483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42
22	20075143	913386:1	G	]22:20075626]G	23	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=913386:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:20075143(-)-22:20075626(+)__22_20065501_20090501D;SPAN=483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:0:9:-22.96:23.15
22	20075626	913386:2	G	G[22:20075143[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=913386:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:20075143(-)-22:20075626(+)__22_20065501_20090501D;SPAN=483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:0:9:-22.96:23.15
22	22352809	914312:1	T	]22:22375955]T	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=914312:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:22352809(-)-22:22375955(+)__22_22368501_22393501D;SPAN=23146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
22	22375955	914312:2	A	A[22:22352809[	28	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=914312:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:22352809(-)-22:22375955(+)__22_22368501_22393501D;SPAN=23146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
22	23429471	914635:2	C	[7:1876939[C	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=914635:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:1876939(-)-22:23429471(-)__22_23422001_23447001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
22	23558690	914724:1	A	A[22:23561043[	24	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=914724:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:23558690(+)-22:23561043(-)__22_23544501_23569501D;SPAN=2353;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:0:9:-24.09:24.09
22	23561043	914724:2	A	]22:23558690]A	24	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=914724:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:23558690(+)-22:23561043(-)__22_23544501_23569501D;SPAN=2353;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:0:9:-24.09:24.09
22	23683431	914791:1	G	G[22:23685352[	37	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=914791:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_23667001_23692001_69C;SPAN=1921;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93
22	23685352	914791:2	G	]22:23683431]G	37	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=914791:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_23667001_23692001_69C;SPAN=1921;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93
22	23853676	914841:2	T	[2:47582850[T	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=914841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_79C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:15:2:-49.48:49.48
22	23853754	914857:1	A	A[22:23856319[	61	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAAAA;MAPQ=60;MATEID=914857:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_23838501_23863501_51C;SPAN=2565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:29:11.6:61.1,0,11.6:21:0:-63.06:63.06
22	23856319	914857:2	G	]22:23853754]G	61	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAAAA;MAPQ=60;MATEID=914857:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_51C;SPAN=2565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:29:11.6:61.1,0,11.6:21:0:-63.06:63.06
22	23931957	914955:1	A	A[22:23969109[	52	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=914955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_23961001_23986001_4C;SPAN=37152;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:12:4.8:52.8,4.8,0:18:0:-52.81:52.81
22	23969109	914955:2	C	]22:23931957]C	52	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=914955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_23961001_23986001_4C;SPAN=37152;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:12:4.8:52.8,4.8,0:18:0:-52.81:52.81
22	25006973	915214:1	C	C[22:25007371[	28	PASS	EVDNC=ASSMB;INSERTION=AGGTTTTCGGGATT;MAPQ=60;MATEID=915214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_24990001_25015001_32C;SPAN=398;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
22	25007371	915214:2	A	]22:25006973]A	28	PASS	EVDNC=ASSMB;INSERTION=AGGTTTTCGGGATT;MAPQ=60;MATEID=915214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_24990001_25015001_32C;SPAN=398;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
22	25178400	915247:2	T	]20:63640433]T	33	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=915247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:63640433(+)-22:25178400(-)__22_25161501_25186501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:10:3:33,3,0:0:11:-33.01:33.01
22	26772113	915762:1	T	T[22:26773830[	21	PASS	EVDNC=ASSMB;HOMSEQ=CTTAACCTCT;MAPQ=60;MATEID=915762:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_26754001_26779001_71C;SPAN=1717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23
22	26773830	915762:2	C	]22:26772113]C	21	PASS	EVDNC=ASSMB;HOMSEQ=CTTAACCTCT;MAPQ=60;MATEID=915762:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_26754001_26779001_71C;SPAN=1717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23
22	28669436	916262:2	T	T[3:176189690[	6	PASS	EVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=916262:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_73C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:105:6.8:6.8,0,257.6:11:0:-6.796:21.38
22	28669457	699947:2	A	A[14:57720286[	19	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=699947:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_57697501_57722501_12C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
22	28669458	916297:2	A	[14:57720286[A	18	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=CA;INSERTION=GTGACTGAATCCCAAAATTATATTGGTAACATGGAAATTCCTGATAGGGGAAGAATATTCCCAGAAGTGTGACCAGTTAGGGCCAAAATAAAAGGTA;MAPQ=60;MATEID=916297:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_22_28665001_28690001_91C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:111:18.5:18.5,0,259.4:15:2:-18.31:30.92
22	28669482	916278:2	T	T[7:111682701[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=916278:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_206C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:102:5.4:0,5.4,267.3:7:2:5.564:12.26
22	28669566	916274:2	A	A[7:52635403[	0	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=916274:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:117:0.2:0.2,0,293.9:10:0:-0.1223:18.51
22	28669594	916305:2	T	T[16:25806596[	0	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=916305:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:116:0.5:0.5,0,290.9:10:0:-0.4034:18.55
22	28669793	916311:2	A	]17:55763133]A	73	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=ACTAAGCAAATTATTTAAAATAATAATTTTAAAATAAAATGACTAAGCAAATTATTTAAAATAATAATTTGCTTAGTCATTTATTCA;MAPQ=60;MATEID=916311:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_22_28665001_28690001_87C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:138:73.7:73.7,0,271.7:34:5:-73.44:79.95
22	28669897	916271:2	A	]7:15965553]A	7	PASS	EVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=916271:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_80C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:103:7.4:7.4,0,251.6:11:0:-7.359:21.48
22	28669943	916313:2	T	T[17:55763576[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916313:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:55763576(-)-22:28669943(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:71:26.3:26.3,0,151.7:0:14:-26.26:31.38
22	28669946	916294:2	A	A]13:107584405]	32	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=916294:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_142C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:72:32.6:32.6,0,148.1:16:0:-32.58:36.8
22	28669971	916269:2	C	C]5:98524537]	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916269:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:98524537(+)-22:28669971(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:74:15.5:15.5,0,170.6:0:11:-15.51:23.17
22	28673796	916320:1	A	[22:28674065[A	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=916320:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_181C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:8:7:-23.94:25.95
22	28674065	916320:2	A	[22:28673796[A	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=916320:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_181C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:8:7:-23.94:25.95
22	28674185	916288:2	C	C]13:71226063]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916288:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:71226063(+)-22:28674185(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
22	28827617	916360:1	A	]22:28839022]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AGAC;MAPQ=60;MATEID=916360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28836501_28861501_18C;SPAN=11405;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78
22	28839022	916360:2	C	C[22:28827617[	56	PASS	EVDNC=ASSMB;HOMSEQ=AGAC;MAPQ=60;MATEID=916360:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28836501_28861501_18C;SPAN=11405;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78
22	30425970	916786:1	G	]22:30486433]G	33	PASS	EVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=916786:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_30478001_30503001_35C;SPAN=60463;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:11:3:33,3,0:10:0:-32.46:32.46
22	30486433	916786:2	A	A[22:30425970[	33	PASS	EVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=916786:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_30478001_30503001_35C;SPAN=60463;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:11:3:33,3,0:10:0:-32.46:32.46
22	32179921	917272:2	C	C[9:98712914[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=917272:1;MATENM=7;NM=1;NUMPARTS=3;SCTG=c_22_32168501_32193501_13C;SECONDARY;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:11:9:-46.21:46.21
22	32179925	917274:2	G	]9:98715302]G	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCATGGTGAGTCT;MAPQ=60;MATEID=917274:1;MATENM=35;NM=2;NUMPARTS=2;SCTG=c_22_32168501_32193501_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:19:7:-62.72:62.72
22	32899786	917609:1	C	C[22:32900091[	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAGGAAGTC;MAPQ=60;MATEID=917609:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_32879001_32904001_118C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81
22	32900091	917609:2	A	]22:32899786]A	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAGGAAGTC;MAPQ=60;MATEID=917609:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_32879001_32904001_118C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81
22	34322060	918200:1	A	[22:34474116[A	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCT;MAPQ=60;MATEID=918200:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_71C;SPAN=152056;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:19:5.1:56.1,5.1,0:16:7:-56.11:56.11
22	34474116	918200:2	T	[22:34322060[T	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCT;MAPQ=60;MATEID=918200:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_71C;SPAN=152056;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:19:5.1:56.1,5.1,0:16:7:-56.11:56.11
22	34476818	918199:2	T	T[2:240614048[	25	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=918199:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99
22	34664447	918283:1	A	A[22:34665282[	44	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=918283:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34643001_34668001_90C;SPAN=835;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
22	34665282	918283:2	A	]22:34664447]A	44	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=918283:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34643001_34668001_90C;SPAN=835;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
22	35063008	918417:1	G	G[22:35063429[	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGGGGGC;MAPQ=60;MATEID=918417:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_22_35059501_35084501_25C;SPAN=421;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:9:11:-51.41:51.41
22	35063429	918417:2	A	]22:35063008]A	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGGGGGC;MAPQ=60;MATEID=918417:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_22_35059501_35084501_25C;SPAN=421;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:9:11:-51.41:51.41
22	35249223	918484:1	T	T[22:35250146[	46	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=918484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:35249223(+)-22:35250146(-)__22_35231001_35256001D;SPAN=923;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21
22	35250146	918484:2	C	]22:35249223]C	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=918484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:35249223(+)-22:35250146(-)__22_35231001_35256001D;SPAN=923;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21
22	36533059	918828:1	T	[22:36538235[T	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=918828:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_36529501_36554501_31C;SPAN=5176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:8:5:-34.32:34.32
22	36538235	918828:2	T	[22:36533059[T	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=918828:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_36529501_36554501_31C;SPAN=5176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:8:5:-34.32:34.32
22	36747132	918917:1	T	T[22:36751852[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTAGCT;MAPQ=60;MATEID=918917:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_36750001_36775001_21C;SPAN=4720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:4:2.1:23.1,2.1,0:5:6:-23.11:23.11
22	36751852	918917:2	A	]22:36747132]A	23	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AGTAGCT;MAPQ=60;MATEID=918917:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_36750001_36775001_21C;SPAN=4720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:4:2.1:23.1,2.1,0:5:6:-23.11:23.11
22	37015985	919060:1	C	]22:37190824]C	42	PASS	EVDNC=ASSMB;HOMSEQ=CCA;MAPQ=60;MATEID=919060:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_37166501_37191501_89C;SPAN=174839;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91
22	37190824	919060:2	A	A[22:37015985[	42	PASS	EVDNC=ASSMB;HOMSEQ=CCA;MAPQ=60;MATEID=919060:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_37166501_37191501_89C;SPAN=174839;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91
22	42705458	920298:1	C	C[22:42706193[	42	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AAAATACAAAAAATTAGC;MAPQ=60;MATEID=920298:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_22_42703501_42728501_40C;SPAN=735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:2:13:-42.91:42.91
22	42706193	920298:2	A	]22:42705458]A	42	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=AAAATACAAAAAATTAGC;MAPQ=60;MATEID=920298:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_22_42703501_42728501_40C;SPAN=735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:2:13:-42.91:42.91
22	44904504	920968:1	G	G[22:44904876[	38	PASS	EVDNC=ASSMB;INSERTION=GGTATAAAATACTGAGTTGGCAGTG;MAPQ=60;MATEID=920968:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_44884001_44909001_62C;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
22	44904876	920968:2	A	]22:44904504]A	38	PASS	EVDNC=ASSMB;INSERTION=GGTATAAAATACTGAGTTGGCAGTG;MAPQ=60;MATEID=920968:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_44884001_44909001_62C;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
22	45349456	921146:1	C	C[22:45350365[	33	PASS	EVDNC=ASSMB;HOMSEQ=CCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGC;MAPQ=60;MATEID=921146:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_45325001_45350001_48C;SPAN=909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:11:0:-33.01:33.01
22	45349559	921149:1	C	]22:45350566]C	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCCTGACCTTGTGATCTGCCTGCCTCGGCCTCCCATAGTGCTGGGATTACAGGCGTGAGCCACCG;MAPQ=60;MATEID=921149:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_45349501_45374501_67C;SPAN=1007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:13:5.1:56.1,5.1,0:14:8:-56.11:56.11
22	45350365	921146:2	C	]22:45349456]C	33	PASS	EVDNC=ASSMB;HOMSEQ=CCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGC;MAPQ=60;MATEID=921146:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_45325001_45350001_48C;SPAN=909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:11:0:-33.01:33.01
22	45350566	921149:2	G	G[22:45349559[	56	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=CTCCTGACCTTGTGATCTGCCTGCCTCGGCCTCCCATAGTGCTGGGATTACAGGCGTGAGCCACCG;MAPQ=60;MATEID=921149:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_45349501_45374501_67C;SPAN=1007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:13:5.1:56.1,5.1,0:14:8:-56.11:56.11
22	45479153	921203:1	T	T[22:45479470[	22	PASS	EVDNC=ASSMB;HOMSEQ=TATTATAAATTTTT;MAPQ=60;MATEID=921203:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_45472001_45497001_108C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:9:0:-22.4:22.76
22	45479470	921203:2	T	]22:45479153]T	22	PASS	EVDNC=ASSMB;HOMSEQ=TATTATAAATTTTT;MAPQ=60;MATEID=921203:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_45472001_45497001_108C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:9:0:-22.4:22.76
22	45595928	895070:2	G	G[21:10489827[	35	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=895070:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10489827(-)-22:45595928(+)__21_10486001_10511001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63
22	46026671	921353:1	C	]22:46027582]C	15	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=921353:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_46011001_46036001_9C;SPAN=911;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51
22	46027582	921353:2	C	C[22:46026671[	15	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=921353:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_46011001_46036001_9C;SPAN=911;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51
22	47300719	921635:1	G	G[22:47301110[	42	PASS	EVDNC=ASSMB;HOMSEQ=AGGAAG;MAPQ=60;MATEID=921635:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47285001_47310001_39C;SPAN=391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
22	47301110	921635:2	A	]22:47300719]A	42	PASS	EVDNC=ASSMB;HOMSEQ=AGGAAG;MAPQ=60;MATEID=921635:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47285001_47310001_39C;SPAN=391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
22	47386239	921681:1	T	T[22:47386455[	19	PASS	EVDNC=ASSMB;INSERTION=TGTAG;MAPQ=60;MATEID=921681:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47383001_47408001_54C;SPAN=216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19
22	47386455	921681:2	C	]22:47386239]C	19	PASS	EVDNC=ASSMB;INSERTION=TGTAG;MAPQ=60;MATEID=921681:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47383001_47408001_54C;SPAN=216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19
22	49029656	922294:2	T	T[2:85486995[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=922294:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_49024501_49049501_90C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:7:4:-26.41:26.41
22	49205551	922378:1	A	]22:49205666]A	17	PASS	EVDNC=ASSMB;HOMSEQ=ACCTCCAT;MAPQ=60;MATEID=922378:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_49196001_49221001_12C;SPAN=115;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
22	49205666	922378:2	T	T[22:49205551[	17	PASS	EVDNC=ASSMB;HOMSEQ=ACCTCCAT;MAPQ=60;MATEID=922378:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_49196001_49221001_12C;SPAN=115;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
22	49226612	922392:1	C	]22:49228522]C	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=922392:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:49226612(-)-22:49228522(+)__22_49220501_49245501D;SPAN=1910;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36
22	49228522	922392:2	G	G[22:49226612[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=922392:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:49226612(-)-22:49228522(+)__22_49220501_49245501D;SPAN=1910;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36
X	522245	923061:1	T	]X:522610]T	5	PASS	DISC_MAPQ=11;EVDNC=TSI_L;HOMSEQ=TTTCTTTCTTTCTCTTTCTTTCTTTT;MAPQ=53;MATEID=923061:2;MATENM=52;NM=0;NUMPARTS=4;REPSEQ=TTCTTTCTTTCT;SCTG=c_23_514501_539501_70C;SPAN=365;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:5:5,0,16:5:5:-4.711:5.41
X	522610	923061:2	T	T[X:522245[	5	PASS	DISC_MAPQ=14;EVDNC=TSI_L;HOMSEQ=TTTCTTTCTTTCTCTTTCTTTCTTTT;MAPQ=36;MATEID=923061:1;MATENM=0;NM=52;NUMPARTS=4;REPSEQ=TTCTTTCTTTCT;SCTG=c_23_514501_539501_70C;SPAN=365;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:5:5,0,16:5:5:-4.711:5.41
X	700223	923242:1	C	C[X:700508[	6	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATGACAGGC;MAPQ=60;MATEID=923242:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_686001_711001_13C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:24:6.5:6.5,0,52.7:4:0:-6.458:8.642
X	700508	923242:2	G	]X:700223]G	6	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATGACAGGC;MAPQ=60;MATEID=923242:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_686001_711001_13C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:24:6.5:6.5,0,52.7:4:0:-6.458:8.642
X	1083702	923494:1	C	C[X:1084699[	52	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=923494:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:1083702(+)-23:1084699(-)__23_1078001_1103001D;SPAN=997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:2:4.8:52.8,4.8,0:0:18:-52.81:52.81
X	1084699	923494:2	A	]X:1083702]A	52	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=923494:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:1083702(+)-23:1084699(-)__23_1078001_1103001D;SPAN=997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:2:4.8:52.8,4.8,0:0:18:-52.81:52.81
X	2277183	924095:1	G	G[X:2282290[	26	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=924095:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:2277183(+)-23:2282290(-)__23_2278501_2303501D;SPAN=5107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
X	2282290	924095:2	A	]X:2277183]A	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=924095:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:2277183(+)-23:2282290(-)__23_2278501_2303501D;SPAN=5107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
X	5047637	924954:1	T	T[Un_KN707734v1_decoy:1[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=924954:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_5047001_5072001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:4:4.2:46.2,4.2,0:15:0:-46.21:46.21
X	5137385	924998:1	G	G[X:5139458[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=924998:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:5137385(+)-23:5139458(-)__23_5120501_5145501D;SPAN=2073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	5139458	924998:2	A	]X:5137385]A	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=924998:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:5137385(+)-23:5139458(-)__23_5120501_5145501D;SPAN=2073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	5811084	925207:1	G	[X:5812566[G	60	PASS	EVDNC=ASSMB;HOMSEQ=GTGGA;MAPQ=60;MATEID=925207:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_23_5806501_5831501_11C;SPAN=1482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:32:17.6:60.5,0,17.6:21:0:-61.42:61.42
X	5811085	925208:1	T	T]X:5812751]	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=925208:2;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_23_5806501_5831501_4C;SPAN=1666;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:20:5:-78.56:78.56
X	5812566	925207:2	T	[X:5811084[T	60	PASS	EVDNC=ASSMB;HOMSEQ=GTGGA;MAPQ=60;MATEID=925207:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_23_5806501_5831501_11C;SPAN=1482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:32:17.6:60.5,0,17.6:21:0:-61.42:61.42
X	5812751	925208:2	A	A]X:5811085]	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=925208:1;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_23_5806501_5831501_4C;SPAN=1666;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:20:5:-78.56:78.56
X	7232716	925458:1	A	]X:7238469]A	23	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=925458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_7227501_7252501_10C;SPAN=5753;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15
X	7238469	925458:2	C	C[X:7232716[	23	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=925458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_7227501_7252501_10C;SPAN=5753;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15
X	11051818	925963:1	T	]X:11106877]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TCTA;MAPQ=60;MATEID=925963:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_11098501_11123501_2C;SPAN=55059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
X	11106877	925963:2	A	A[X:11051818[	46	PASS	EVDNC=ASSMB;HOMSEQ=TCTA;MAPQ=60;MATEID=925963:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_11098501_11123501_2C;SPAN=55059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
X	11713807	928072:1	A	A[X:26711169[	23	PASS	EVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=928072:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_26705001_26730001_13C;SPAN=14997362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74
X	11714296	926022:2	C	[2:33894159[C	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=926022:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_11711001_11736001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:3:5:-17.49:17.74
X	11714300	926030:2	A	[12:39152300[A	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTTAGCAGC;MAPQ=60;MATEID=926030:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_11711001_11736001_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:21:14:14,0,37.1:3:6:-13.9:14.56
X	11935167	926062:1	T	T[X:11941316[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=926062:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:11935167(+)-23:11941316(-)__23_11931501_11956501D;SPAN=6149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
X	11941316	926062:2	C	]X:11935167]C	42	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=926062:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:11935167(+)-23:11941316(-)__23_11931501_11956501D;SPAN=6149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
X	16730323	926793:1	C	]X:16795044]C	56	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=926793:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_16782501_16807501_16C;SPAN=64721;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:15:5.1:56.1,5.1,0:13:11:-56.11:56.11
X	16795044	926793:2	G	G[X:16730323[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=926793:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_16782501_16807501_16C;SPAN=64721;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:15:5.1:56.1,5.1,0:13:11:-56.11:56.11
X	26711169	928072:2	C	]X:11713807]C	23	PASS	EVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=928072:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_26705001_26730001_13C;SPAN=14997362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74
X	28486849	928282:1	T	T[X:28487407[	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=928282:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_28469001_28494001_5C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
X	28487407	928282:2	A	]X:28486849]A	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=928282:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_28469001_28494001_5C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
X	29251032	928378:1	G	[X:29252080[G	82	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=928378:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_29228501_29253501_8C;SPAN=1048;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:26:7.5:82.5,7.5,0:18:15:-82.52:82.52
X	29252080	928378:2	A	[X:29251032[A	82	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=928378:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_29228501_29253501_8C;SPAN=1048;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:26:7.5:82.5,7.5,0:18:15:-82.52:82.52
X	34787850	929459:1	A	]X:34792630]A	28	PASS	EVDNC=ASSMB;INSERTION=AGAAT;MAPQ=60;MATEID=929459:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_34790001_34815001_15C;SPAN=4780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:17:11.9:28.4,0,11.9:10:0:-28.47:28.47
X	34792630	929459:2	G	G[X:34787850[	28	PASS	EVDNC=ASSMB;INSERTION=AGAAT;MAPQ=60;MATEID=929459:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_34790001_34815001_15C;SPAN=4780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:17:11.9:28.4,0,11.9:10:0:-28.47:28.47
X	38199383	616477:2	G	G[12:14323917[	36	PASS	DISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=TTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGAGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGG;MAPQ=34;MATEID=616477:1;MATENM=4;NM=6;NUMPARTS=2;SCTG=c_12_14308001_14333001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:7:3.3:36.3,3.3,0:6:7:-36.31:36.31
X	46827692	930954:2	A	A]17:50673981]	29	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT;MAPQ=59;MATEID=930954:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_46819501_46844501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:3:7:-29.71:29.71
X	48232327	931311:1	T	T[X:48233548[	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=931311:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:48232327(+)-23:48233548(-)__23_48216001_48241001D;SPAN=1221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39
X	48233548	931311:2	C	]X:48232327]C	18	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=931311:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:48232327(+)-23:48233548(-)__23_48216001_48241001D;SPAN=1221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39
X	49017568	931447:1	G	]X:49018696]G	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=931447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_49000001_49025001_18C;SPAN=1128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:12:8:-52.81:52.81
X	49018696	931447:2	C	C[X:49017568[	52	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=931447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_49000001_49025001_18C;SPAN=1128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:12:8:-52.81:52.81
X	49069209	931464:1	T	]X:49069329]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TGCCT;MAPQ=60;MATEID=931464:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_49049001_49074001_17C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
X	49069329	931464:2	T	T[X:49069209[	41	PASS	EVDNC=ASSMB;HOMSEQ=TGCCT;MAPQ=60;MATEID=931464:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_49049001_49074001_17C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
X	49142499	807511:2	A	A]17:52598606]	29	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=807511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:52598606(+)-23:49142499(+)__17_52577001_52602001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3
X	52857692	988228:1	T	]X:55652526]T	39	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACTTTATAA;INSERTION=TGTAAAGCTGTAAAATTTTAAGTGGGAGCATCATAAGTCAGGGGCATCTGTATTCTCTCTGTTGGACTTTGGTATCCAGGTTACACTATCTTCATGAAATGAATTGGGATATAAGTCCTCTTTCTATTCTCTGAAACTGAAATTTCTGCAAGACTGAATAACTTGGGGATAGCCTTTAC;MAPQ=60;MATEID=988228:2;MATENM=0;NM=4;NUMPARTS=7;REPSEQ=AA;SCTG=c_554_1_2235_0C;SPAN=2794834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:0:3.6:39.6,3.6,0:13:0:-39.61:39.61
X	54890705	1003600:1	G	G[Un_JTFH01001605v1_decoy:1[	46	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=1003600:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_2448_1_1195_1C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
X	55652526	988228:2	T	T[X:52857692[	39	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACTTTATAA;INSERTION=TGTAAAGCTGTAAAATTTTAAGTGGGAGCATCATAAGTCAGGGGCATCTGTATTCTCTCTGTTGGACTTTGGTATCCAGGTTACACTATCTTCATGAAATGAATTGGGATATAAGTCCTCTTTCTATTCTCTGAAACTGAAATTTCTGCAAGACTGAATAACTTGGGGATAGCCTTTAC;MAPQ=60;MATEID=988228:1;MATENM=4;NM=0;NUMPARTS=7;REPSEQ=AA;SCTG=c_554_1_2235_0C;SPAN=2794834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:0:3.6:39.6,3.6,0:13:0:-39.61:39.61
X	55676039	932475:1	T	T[X:55683405[	23	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=932475:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:55676039(+)-23:55683405(-)__23_55664001_55689001D;SPAN=7366;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	55683405	932475:2	T	]X:55676039]T	23	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=932475:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:55676039(+)-23:55683405(-)__23_55664001_55689001D;SPAN=7366;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	62600756	933238:1	A	]X:62601314]A	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACATAAAAACTAGACAGAAGCCTTCTCAGAAACTACTTTGTGATGT;MAPQ=60;MATEID=933238:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_62597501_62622501_43C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:14:7:-47.96:47.96
X	62601314	933238:2	T	T[X:62600756[	47	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=ACATAAAAACTAGACAGAAGCCTTCTCAGAAACTACTTTGTGATGT;MAPQ=60;MATEID=933238:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_62597501_62622501_43C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:14:7:-47.96:47.96
X	64507376	933494:2	A	A[14:52475035[	42	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=933494:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_23_64484001_64509001_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:10:9:-42.91:42.91
X	64512169	933497:2	T	[2:4274462[T	36	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=16;MATEID=933497:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_64508501_64533501_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:7:5:-36.31:36.31
X	68328802	934007:2	C	C[17:45488644[	52	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=934007:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:45488644(-)-23:68328802(+)__23_68306001_68331001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81
X	70909425	934404:1	A	[X:70920177[A	52	PASS	DISC_MAPQ=59;EVDNC=TSI_L;HOMSEQ=CCATGTT;MAPQ=60;MATEID=934404:2;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=TT;SCTG=c_23_70903001_70928001_4C;SPAN=10752;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:13:4.8:52.8,4.8,0:14:8:-52.81:52.81
X	70909570	934405:1	T	T]X:70917407]	28	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=934405:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_70903001_70928001_3C;SPAN=7837;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
X	70917407	934405:2	T	T]X:70909570]	28	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=934405:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_70903001_70928001_3C;SPAN=7837;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
X	70920177	934404:2	C	[X:70909425[C	52	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CCATGTT;MAPQ=60;MATEID=934404:1;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=TT;SCTG=c_23_70903001_70928001_4C;SPAN=10752;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:13:4.8:52.8,4.8,0:14:8:-52.81:52.81
X	76034035	935120:1	T	T[X:76034332[	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAATGTCTTCTTTT;MAPQ=48;MATEID=935120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_76023501_76048501_4C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:5:12:132,12,0:38:6:-132:132
X	76034332	935120:2	A	]X:76034035]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAATGTCTTCTTTT;MAPQ=60;MATEID=935120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_76023501_76048501_4C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:5:12:132,12,0:38:6:-132:132
X	77865920	935477:1	C	C[X:77868370[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=935477:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_77861001_77886001_29C;SPAN=2450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:11:12:-56.11:56.11
X	77868370	935477:2	C	]X:77865920]C	56	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=935477:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_77861001_77886001_29C;SPAN=2450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:11:12:-56.11:56.11
X	79412522	935715:1	C	C[X:79415029[	41	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=935715:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_79404501_79429501_21C;SPAN=2507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24
X	79415029	935715:2	C	]X:79412522]C	41	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=935715:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_79404501_79429501_21C;SPAN=2507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24
X	81554533	936101:1	A	]X:81557077]A	29	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=936101:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_81536001_81561001_9C;SPAN=2544;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
X	81557077	936101:2	C	C[X:81554533[	29	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=936101:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_81536001_81561001_9C;SPAN=2544;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
X	84849013	936673:1	A	[X:84880060[A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=936673:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:84849013(-)-23:84880060(-)__23_84843501_84868501D;SPAN=31047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
X	84880060	936673:2	C	[X:84849013[C	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=936673:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:84849013(-)-23:84880060(-)__23_84843501_84868501D;SPAN=31047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
X	86350284	937029:1	G	G[X:86354860[	66	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=937029:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:86350284(+)-23:86354860(-)__23_86338001_86363001D;SPAN=4576;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:6:6:66,6,0:0:22:-66.02:66.02
X	86354860	937029:2	C	]X:86350284]C	66	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=937029:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:86350284(+)-23:86354860(-)__23_86338001_86363001D;SPAN=4576;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:6:6:66,6,0:0:22:-66.02:66.02
X	87031756	937199:1	G	G[X:87032222[	39	PASS	EVDNC=ASSMB;INSERTION=GAGTTTTGTTTTAAG;MAPQ=60;MATEID=937199:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_87024001_87049001_7C;SPAN=466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61
X	87032222	937199:2	T	]X:87031756]T	39	PASS	EVDNC=ASSMB;INSERTION=GAGTTTTGTTTTAAG;MAPQ=60;MATEID=937199:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_87024001_87049001_7C;SPAN=466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61
X	89206255	937778:1	T	T[X:89207312[	3	PASS	DISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=GTGTCGTAAAATACCGACGTATCTGTTATAATCGTCGGTGTCGTAAAATACCGACGTATAT;MAPQ=16;MATEID=937778:2;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_23_89204501_89229501_6C;SPAN=1057;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:106:3.5:3.5,0,260.9:6:4:-3.214:18.96
X	89207312	937778:2	G	]X:89206255]G	3	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGTCGTAAAATACCGACGTATCTGTTATAATCGTCGGTGTCGTAAAATACCGACGTATAT;MAPQ=60;MATEID=937778:1;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_23_89204501_89229501_6C;SPAN=1057;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:106:3.5:3.5,0,260.9:6:4:-3.214:18.96
X	93541300	938557:1	T	T[X:93546506[	46	PASS	EVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=938557:2;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_23_93541001_93566001_10C;SPAN=5206;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21
X	93546506	938557:2	T	]X:93541300]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=938557:1;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_23_93541001_93566001_10C;SPAN=5206;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21
X	93733574	948094:1	T	]X:150010694]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=948094:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_149989001_150014001_9C;SPAN=56277120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:10:0:-29.71:29.71
X	97170044	939151:1	A	A[X:97179380[	37	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=939151:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_97167001_97192001_10C;SPAN=9336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78
X	97179380	939151:2	A	]X:97170044]A	37	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=939151:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_97167001_97192001_10C;SPAN=9336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78
X	98861246	939490:1	G	G[X:98861440[	19	PASS	EVDNC=ASSMB;INSERTION=TAGGAAAAAC;MAPQ=60;MATEID=939490:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_98857501_98882501_8C;SPAN=194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
X	98861440	939490:2	G	]X:98861246]G	19	PASS	EVDNC=ASSMB;INSERTION=TAGGAAAAAC;MAPQ=60;MATEID=939490:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_98857501_98882501_8C;SPAN=194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
X	104431017	940520:1	G	G[X:104436824[	34	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=940520:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_104419001_104444001_5C;SPAN=5807;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:13:0:-34.2:34.27
X	104436824	940520:2	A	]X:104431017]A	34	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=940520:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_104419001_104444001_5C;SPAN=5807;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:13:0:-34.2:34.27
X	105542844	940773:2	T	T[2:157171629[	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAT;MAPQ=60;MATEID=940773:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_105521501_105546501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
X	108048015	941109:2	T	T[17:81970200[	33	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=941109:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:81970200(-)-23:108048015(+)__23_108045001_108070001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:5:3:33,3,0:0:11:-33.01:33.01
X	111769097	941661:2	T	T[14:20273533[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=941661:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_111769001_111794001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:9:8:-42.71:42.71
X	123838983	943695:1	C	C[X:123839817[	46	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGGGTTTCACCATGTTGGCCAGGCTGGTCTAGAACTCCTGAC;MAPQ=60;MATEID=943695:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_23_123823001_123848001_34C;SPAN=834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:11:7:-46.21:46.21
X	123839817	943695:2	G	]X:123838983]G	46	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGGGTTTCACCATGTTGGCCAGGCTGGTCTAGAACTCCTGAC;MAPQ=60;MATEID=943695:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_23_123823001_123848001_34C;SPAN=834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:11:7:-46.21:46.21
X	128240984	944454:1	A	A[X:128745219[	33	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=944454:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_128723001_128748001_38C;SPAN=504235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:7:3:33,3,0:11:0:-33.01:33.01
X	128745219	944454:2	A	]X:128240984]A	33	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=944454:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_128723001_128748001_38C;SPAN=504235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:7:3:33,3,0:11:0:-33.01:33.01
X	129004193	944531:1	T	T[X:129005596[	14	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=944531:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_128992501_129017501_5C;SPAN=1403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:7:1.4:14.6,0,1.4:5:0:-14.96:14.96
X	129005596	944531:2	A	]X:129004193]A	14	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=944531:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_128992501_129017501_5C;SPAN=1403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:7:1.4:14.6,0,1.4:5:0:-14.96:14.96
X	131679239	944851:1	C	C]X:131840248]	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGTGTGTCTA;MAPQ=60;MATEID=944851:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_23_131834501_131859501_5C;SPAN=161009;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:16:3:-52.81:52.81
X	131840248	944851:2	A	A]X:131679239]	52	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=GTGTGTGTCTA;MAPQ=11;MATEID=944851:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_23_131834501_131859501_5C;SPAN=161009;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:16:3:-52.81:52.81
X	135906193	945454:1	T	]X:135906599]T	27	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TACTTGGTTTCCATATGCAT;MAPQ=60;MATEID=945454:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_135901501_135926501_3C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:9:6:-27.32:27.77
X	135906599	945454:2	T	T[X:135906193[	27	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TACTTGGTTTCCATATGCAT;MAPQ=60;MATEID=945454:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_135901501_135926501_3C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:9:6:-27.32:27.77
X	136075840	945488:1	G	G[X:136076155[	26	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATAAAACAGGG;MAPQ=60;MATEID=945488:2;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_23_136073001_136098001_1C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57
X	136076155	945488:2	A	]X:136075840]A	26	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATAAAACAGGG;MAPQ=60;MATEID=945488:1;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_23_136073001_136098001_1C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57
X	136874391	945666:2	G	G]9:30690082]	32	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=945666:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:30690082(+)-23:136874391(+)__23_136857001_136882001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57
X	140075589	946290:1	C	]X:140138868]C	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=946290:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:140075589(-)-23:140138868(+)__23_140066501_140091501D;SPAN=63279;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	140138868	946290:2	C	C[X:140075589[	23	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=946290:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:140075589(-)-23:140138868(+)__23_140066501_140091501D;SPAN=63279;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	141414291	13066:2	G	G[1:53954735[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=60;MATEID=13066:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_53949001_53974001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:94:0.2:0.2,0,234.5:6:4:0.01462:14.79
X	141421312	946528:1	C	C[X:141427247[	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=946528:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141421312(+)-23:141427247(-)__23_141414001_141439001D;SPAN=5935;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:6:5.4:59.4,5.4,0:0:20:-59.41:59.41
X	141427247	946528:2	C	]X:141421312]C	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=946528:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141421312(+)-23:141427247(-)__23_141414001_141439001D;SPAN=5935;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:6:5.4:59.4,5.4,0:0:20:-59.41:59.41
X	141915537	946660:1	T	T]X:142187317]	23	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=946660:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141915537(+)-23:142187317(+)__23_142173501_142198501D;SPAN=271780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	142187317	946660:2	T	T]X:141915537]	23	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=946660:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141915537(+)-23:142187317(+)__23_142173501_142198501D;SPAN=271780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	142905838	887457:2	A	A]20:58493483]	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=887457:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_58481501_58506501_64C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:59:26.3:26.3,0,122:11:2:-26.33:29.85
X	143542896	946917:1	T	]X:143646903]T	39	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=GAATTTGTT;MAPQ=60;MATEID=946917:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_143643501_143668501_13C;SPAN=104007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:7:11:-39.61:39.61
X	143646903	946917:2	A	A[X:143542896[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAATTTGTT;MAPQ=60;MATEID=946917:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_143643501_143668501_13C;SPAN=104007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:7:11:-39.61:39.61
X	144323981	947033:1	A	A[X:144326855[	46	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=947033:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:144323981(+)-23:144326855(-)__23_144305001_144330001D;SPAN=2874;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	144326855	947033:2	A	]X:144323981]A	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=947033:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:144323981(+)-23:144326855(-)__23_144305001_144330001D;SPAN=2874;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	144475606	947075:1	N	]Un_JTFH01001910v1_decoy:2437]N	29	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=947075:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_144452001_144477001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:2:2.7:29.7,2.7,0:10:0:-29.71:29.71
X	145340657	947300:1	A	A[X:145342987[	46	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=947300:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:145340657(+)-23:145342987(-)__23_145334001_145359001D;SPAN=2330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:5:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	145342987	947300:2	C	]X:145340657]C	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=947300:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:145340657(+)-23:145342987(-)__23_145334001_145359001D;SPAN=2330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:5:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	146484967	947456:1	T	]X:146496410]T	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=947456:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_146485501_146510501_5C;SPAN=11443;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:6:10:-39.61:39.61
X	146496410	947456:2	T	T[X:146484967[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=947456:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_146485501_146510501_5C;SPAN=11443;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:6:10:-39.61:39.61
X	148375423	947827:1	C	C[X:148376430[	36	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=947827:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:148375423(+)-23:148376430(-)__23_148372001_148397001D;SPAN=1007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
X	148376430	947827:2	G	]X:148375423]G	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=947827:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:148375423(+)-23:148376430(-)__23_148372001_148397001D;SPAN=1007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
X	148428177	947841:1	G	G[X:148429717[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=947841:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_148421001_148446001_6C;SPAN=1540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11
X	148429717	947841:2	T	]X:148428177]T	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=947841:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_148421001_148446001_6C;SPAN=1540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11
X	149654088	948062:1	G	G]X:149749267]	47	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=948062:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:149654088(+)-23:149749267(+)__23_149744001_149769001D;SPAN=95179;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75
X	149749267	948062:2	T	T]X:149654088]	47	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=948062:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:149654088(+)-23:149749267(+)__23_149744001_149769001D;SPAN=95179;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75
X	150010694	948094:2	G	G[X:93733574[	29	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=948094:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_149989001_150014001_9C;SPAN=56277120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:10:0:-29.71:29.71
X	150398269	696185:2	G	]14:47771434]G	22	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=696185:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771434(+)-23:150398269(-)__14_47750501_47775501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
X	150398432	948160:2	T	T[14:47771706[	23	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=948160:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771706(-)-23:150398432(+)__23_150381001_150406001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	154456620	948741:2	C	[2:47092142[C	56	PASS	DISC_MAPQ=5;EVDNC=ASDIS;HOMSEQ=G;MAPQ=18;MATEID=948741:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_154448001_154473001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:12:9:-56.11:56.11
X	155159534	948815:2	C	C[20:55808995[	66	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=948815:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:55808995(-)-23:155159534(+)__23_155158501_155183501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:17:6:66,6,0:0:22:-66.02:66.02


================================================
FILE: tests/AnnotSV/test_23_Exomiser/input/GRCh38-1SV.vcf
================================================
##fileformat=VCFv4.2
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample
10	121496612	569156:2	A	]10:122457304]C	72	PASS	EVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62


================================================
FILE: tests/AnnotSV/test_23_Exomiser/input/GRCh38-multiSV.vcf
================================================
##fileformat=VCFv4.2
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample1
1	1477855	389:1	G	]1:1477984]G	37	PASS	EVDNC=ASSMB;INSERTION=TGT;MAPQ=60;MATEID=389:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_1470001_1495001_12C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
1	1477984	389:2	A	A[1:1477855[	37	PASS	EVDNC=ASSMB;INSERTION=TGT;MAPQ=60;MATEID=389:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_1470001_1495001_12C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
1	1934936	523:1	T	T[1:1935574[	49	PASS	DISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=GTGTTAGGTTGTAGGTACACAGGT;MAPQ=60;MATEID=523:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_1_1911001_1936001_35C;SPAN=638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:16:4:-49.51:49.51
1	1935574	523:2	G	]1:1934936]G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGTTAGGTTGTAGGTACACAGGT;MAPQ=60;MATEID=523:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_1_1911001_1936001_35C;SPAN=638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:16:4:-49.51:49.51
1	3176048	1705:1	C	]1:3176290]C	16	PASS	EVDNC=ASSMB;HOMSEQ=CATCCATCCATCCATCCATCCATC;MAPQ=60;MATEID=1705:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_3160501_3185501_4C;SPAN=242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22
1	3176290	1705:2	C	C[1:3176048[	16	PASS	EVDNC=ASSMB;HOMSEQ=CATCCATCCATCCATCCATCCATC;MAPQ=60;MATEID=1705:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_3160501_3185501_4C;SPAN=242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22
1	4018528	1874:1	G	G[1:4019251[	22	PASS	EVDNC=ASSMB;INSERTION=CTC;MAPQ=60;MATEID=1874:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_4018001_4043001_10C;SPAN=723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
1	4019251	1874:2	T	]1:4018528]T	22	PASS	EVDNC=ASSMB;INSERTION=CTC;MAPQ=60;MATEID=1874:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_4018001_4043001_10C;SPAN=723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
1	6937887	655207:1	C	C[12:132742761[	20	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=655207:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:6937887(+)-12:132742761(-)__12_132741001_132766001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36
1	7429774	888671:1	T	T[20:61337291[	16	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=888671:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:7429774(+)-20:61337291(-)__20_61323501_61348501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:59:16.4:16.4,0,131.9:0:10:-16.43:21.68
1	9045606	3054:1	G	]1:9049477]G	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCA;MAPQ=60;MATEID=3054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_9040501_9065501_7C;SPAN=3871;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:26:7.5:82.5,7.5,0:16:17:-82.52:82.52
1	9049477	3054:2	A	A[1:9045606[	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCA;MAPQ=60;MATEID=3054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_9040501_9065501_7C;SPAN=3871;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:26:7.5:82.5,7.5,0:16:17:-82.52:82.52
1	13299454	4064:1	G	G[6:33062526[	46	PASS	DISC_MAPQ=13;EVDNC=TSI_L;MAPQ=23;MATEID=4064:2;MATENM=11;NM=1;NUMPARTS=3;REPSEQ=GG;SCTG=c_1_13279001_13304001_4C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:13:5:-46.21:46.21
1	16621374	4878:1	C	[1:16951695[C	16	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=4878:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:16621374(-)-1:16951695(-)__1_16611001_16636001D;SPAN=330321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:37:16.1:16.1,0,75.5:0:8:-16.01:18.29
1	16725253	63373:1	A	[1:234776441[A	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GCAGAAGCCGGCGGGATGGGGC;MAPQ=60;MATEID=63373:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_234759001_234784001_38C;SPAN=218051188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:81:22:22.5:247.5,22.5,0:52:53:-247.6:247.6
1	16951695	4878:2	T	[1:16621374[T	16	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=4878:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:16621374(-)-1:16951695(-)__1_16611001_16636001D;SPAN=330321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:37:16.1:16.1,0,75.5:0:8:-16.01:18.29
1	23392332	6511:1	G	]1:23392792]G	29	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=6511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:23392332(-)-1:23392792(+)__1_23373001_23398001D;SPAN=460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3
1	23392792	6511:2	C	C[1:23392332[	29	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=6511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:23392332(-)-1:23392792(+)__1_23373001_23398001D;SPAN=460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3
1	23628304	6591:1	G	G[1:23628951[	49	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=GCCCACCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=6591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_23618001_23643001_9C;SPAN=647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:11:6:-49.51:49.51
1	23628951	6591:2	G	]1:23628304]G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCCACCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=6591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_23618001_23643001_9C;SPAN=647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:11:6:-49.51:49.51
1	24832212	6918:1	T	T[1:24835019[	46	PASS	EVDNC=ASSMB;HOMSEQ=TTGATTTTTTATTTTT;MAPQ=60;MATEID=6918:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_1_24818501_24843501_5C;SPAN=2807;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
1	24835019	6918:2	T	]1:24832212]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TTGATTTTTTATTTTT;MAPQ=60;MATEID=6918:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_1_24818501_24843501_5C;SPAN=2807;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
1	25287187	7022:1	C	]1:25405599]C	23	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=7022:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287187(-)-1:25405599(+)__1_25382001_25407001D;SPAN=118412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
1	25287371	7007:1	G	G]1:25287867]	19	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=7007:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287371(+)-1:25287867(+)__1_25284001_25309001D;SPAN=496;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
1	25287867	7007:2	C	C]1:25287371]	19	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=7007:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287371(+)-1:25287867(+)__1_25284001_25309001D;SPAN=496;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
1	25405599	7022:2	A	A[1:25287187[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=7022:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287187(-)-1:25405599(+)__1_25382001_25407001D;SPAN=118412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
1	28189261	847363:1	T	T]19:23845125]	23	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=847363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:28189261(+)-19:23845125(+)__19_23838501_23863501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
1	28410089	7545:1	C	]1:28410215]C	26	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=7545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_28395501_28420501_15C;SPAN=126;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
1	28410215	7545:2	C	C[1:28410089[	26	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=7545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_28395501_28420501_15C;SPAN=126;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
1	29279188	307504:1	T	T]5:110659597]	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=307504:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29279188(+)-5:110659597(+)__5_110642001_110667001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
1	29552243	7974:1	N	N]1:30655921]	20	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=7974:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29552243(+)-1:30655921(+)__1_30649501_30674501D;SPAN=1103678;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
1	30655921	7974:2	G	G]1:29552243]	20	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=7974:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29552243(+)-1:30655921(+)__1_30649501_30674501D;SPAN=1103678;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
1	32790315	122996:1	T	T]2:161095746]	19	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=122996:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:32790315(+)-2:161095746(+)__2_161087501_161112501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
1	33010843	14040:1	A	A[1:58630799[	28	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=14040:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:33010843(+)-1:58630799(-)__1_58628501_58653501D;SPAN=25619956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81
1	33050733	8608:1	A	]7:24409092]A	99	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=8608:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_33050501_33075501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:32:10.2:112.2,10.2,0:37:0:-112.2:112.2
1	35161530	8994:1	C	C[1:35161848[	82	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGGC;MAPQ=60;MATEID=8994:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_35157501_35182501_39C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:13:7.5:82.5,7.5,0:22:7:-82.52:82.52
1	35161848	8994:2	G	]1:35161530]G	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGC;MAPQ=60;MATEID=8994:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_35157501_35182501_39C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:13:7.5:82.5,7.5,0:22:7:-82.52:82.52
1	35259113	739080:1	A	A[15:76800145[	92	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=A;MAPQ=33;MATEID=739080:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_76783001_76808001_25C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:29:9:-92.42:92.42
1	36267575	9227:1	C	C]1:36269076]	17	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=9227:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36267575(+)-1:36269076(+)__1_36260001_36285001D;SPAN=1501;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
1	36267982	9229:1	C	[1:36268906[C	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGCCTGGCCAATATGGTGAAACCCCATCTCTACT;MAPQ=60;MATEID=9229:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_36260001_36285001_7C;SPAN=924;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:18:7:-69.32:69.32
1	36268906	9229:2	A	[1:36267982[A	69	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCAGCCTGGCCAATATGGTGAAACCCCATCTCTACT;MAPQ=60;MATEID=9229:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_36260001_36285001_7C;SPAN=924;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:18:7:-69.32:69.32
1	36269076	9227:2	T	T]1:36267575]	17	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=9227:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36267575(+)-1:36269076(+)__1_36260001_36285001D;SPAN=1501;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
1	36958707	9337:1	C	C[1:36960147[	66	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=9337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36958707(+)-1:36960147(-)__1_36946001_36971001D;SPAN=1440;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:4:6:66,6,0:0:22:-66.02:66.02
1	36960147	9337:2	G	]1:36958707]G	66	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=9337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36958707(+)-1:36960147(-)__1_36946001_36971001D;SPAN=1440;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:4:6:66,6,0:0:22:-66.02:66.02
1	37472656	90165:1	T	]2:68687747]T	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATTAG;MAPQ=60;MATEID=90165:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_14C;SPAN=-1;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:9:10:-42.24:42.24
1	37472775	90166:1	G	G[2:68687751[	56	PASS	EVDNC=ASSMB;HOMSEQ=CCAG;MAPQ=60;MATEID=90166:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_111C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:18:5.1:56.1,5.1,0:19:0:-56.11:56.11
1	39504305	9980:1	T	]1:39504874]T	65	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=9980:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:39504305(-)-1:39504874(+)__1_39494001_39519001D;SPAN=569;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:0:23:-66.36:66.36
1	39504874	9980:2	G	G[1:39504305[	65	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=9980:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:39504305(-)-1:39504874(+)__1_39494001_39519001D;SPAN=569;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:0:23:-66.36:66.36
1	43593625	10849:1	G	G]1:43594215]	69	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGGCACGGTGGCT;INSERTION=AC;MAPQ=60;MATEID=10849:2;MATENM=0;NM=3;NUMPARTS=3;SCTG=c_1_43585501_43610501_3C;SECONDARY;SPAN=590;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32
1	43594215	10849:2	G	G]1:43593625]	69	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGGCACGGTGGCT;INSERTION=AC;MAPQ=60;MATEID=10849:1;MATENM=3;NM=0;NUMPARTS=3;SCTG=c_1_43585501_43610501_3C;SECONDARY;SPAN=590;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32
1	44098924	160041:1	T	]3:41609700]T	29	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=160041:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:44098924(-)-3:41609700(+)__3_41601001_41626001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71
1	44104205	160035:1	T	T[3:41580812[	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=160035:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_41576501_41601501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
1	44779028	11200:1	T	T[1:44779477[	17	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=11200:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_44761501_44786501_16C;SPAN=449;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39
1	44779477	11200:2	C	]1:44779028]C	17	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=11200:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_44761501_44786501_16C;SPAN=449;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39
1	45703368	11370:1	T	T[Un_KN707671v1_decoy:1[	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=11370:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_45692501_45717501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:19:6:66,6,0:22:0:-66.02:66.02
1	46939969	11731:1	A	[1:47138878[A	38	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=11731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:46939969(-)-1:47138878(-)__1_47138001_47163001D;SPAN=198909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:0:13:-39.01:39.01
1	47138878	11731:2	A	[1:46939969[A	38	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=11731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:46939969(-)-1:47138878(-)__1_47138001_47163001D;SPAN=198909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:0:13:-39.01:39.01
1	51609009	12475:1	A	]1:51840062]A	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=12475:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_51817501_51842501_2C;SPAN=231053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:8:8:-26.55:26.57
1	51840062	12475:2	A	A[1:51609009[	26	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=12475:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_51817501_51842501_2C;SPAN=231053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:8:8:-26.55:26.57
1	53952867	12975:1	T	]1:56216061]T	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=12975:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_65C;SPAN=2263194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:39:45.2:45.2,0,51.8:9:14:-45.15:45.19
1	53952995	12977:1	C	]18:6317356]C	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_190C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:52:15.2:15.2,0,114.2:6:3:-15.09:19.61
1	53953226	12984:1	G	G[9:25849461[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12984:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:6:6:-22.05:23.72
1	53953310	12986:1	T	T]1:53953873]	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=12986:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53953310(+)-1:53953873(+)__1_53949001_53974001D;SPAN=563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
1	53953873	12986:2	A	A]1:53953310]	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=12986:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53953310(+)-1:53953873(+)__1_53949001_53974001D;SPAN=563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
1	53953907	866065:1	C	[20:21065659[C	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=866065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21045501_21070501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:9:4:-33.83:33.83
1	53954234	13008:1	T	[8:1724902[T	26	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=A;INSERTION=AGCCCAGAGACAGAGCTTTCAAGGTGCCTGCTCAGTTTATGAGCCAAGTTTCTATTCTTTTCTGCATGTGTTT;MAPQ=60;MATEID=13008:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_53949001_53974001_174C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:93:26.9:26.9,0,205.1:16:3:-26.67:34.81
1	53954236	260688:1	A	A[4:149687001[	30	PASS	EVDNC=ASSMB;HOMSEQ=ACATAA;MAPQ=60;MATEID=260688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149670501_149695501_34C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
1	53954306	578367:1	C	[11:20762949[C	39	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=578367:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_20751501_20776501_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:9:3.6:39.6,3.6,0:11:3:-39.61:39.61
1	53954324	13015:1	C	]13:56018554]C	0	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=13015:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_79C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:108:6.9:0,6.9,283.8:7:0:7.251:12.08
1	53954398	13030:1	T	T[4:116923084[	0	PASS	EVDNC=ASSMB;HOMSEQ=TATTTCAT;MAPQ=60;MATEID=13030:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:98:4.2:0,4.2,254.1:7:0:4.44:12.39
1	53954555	13050:1	T	T]2:198602574]	16	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=13050:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_99C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:94:16.7:16.7,0,218:11:5:-16.49:26.94
1	53954591	23420:1	T	[1:101901145[T	27	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=23420:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_101895501_101920501_8C;SPAN=47946554;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:8:3:-27.73:27.73
1	53954647	355239:1	T	[6:94103373[T	49	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AATA;MAPQ=60;MATEID=355239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94080001_94105001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:10:12:-49.51:49.51
1	53954656	13059:1	T	]9:29653849]T	7	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=13059:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_206C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:90:7.7:7.7,0,218.9:10:0:-7.712:19.71
1	53954687	283944:1	T	]5:28235202]T	38	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=283944:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28224001_28249001_78C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:9:10:-38.69:38.69
1	53954735	13066:1	C	]X:141414291]C	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=60;MATEID=13066:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:94:0.2:0.2,0,234.5:6:4:0.01462:14.79
1	53954830	13069:1	G	G[7:71849933[	3	PASS	EVDNC=ASSMB;INSERTION=ACAGTACTACAATGAACACTCTTA;MAPQ=60;MATEID=13069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:93:3.8:3.8,0,228.2:9:0:-3.568:17.17
1	53954930	23510:1	T	]1:102149200]T	39	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=23510:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_102140501_102165501_11C;SPAN=48194270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
1	53955314	13082:1	T	T[14:54941811[	28	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=13082:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53955314(+)-14:54941811(-)__1_53949001_53974001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
1	55240234	998154:1	G	G]Un_JTFH01000519v1_decoy:1533]	95	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=998154:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1362_1_1533_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:9:8.7:95.7,8.7,0:32:0:-95.72:95.72
1	56216061	12975:2	T	T[1:53952867[	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=12975:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_65C;SPAN=2263194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:39:45.2:45.2,0,51.8:9:14:-45.15:45.19
1	56365452	13595:1	C	C[1:56369290[	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGAACCACTGCCTC;MAPQ=60;MATEID=13595:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_1_56350001_56375001_21C;SPAN=3838;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22
1	56369290	13595:2	A	]1:56365452]A	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGAACCACTGCCTC;MAPQ=60;MATEID=13595:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_1_56350001_56375001_21C;SPAN=3838;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22
1	56530361	13644:1	C	]1:56530674]C	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=13644:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_56521501_56546501_16C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:39:35.3:35.3,0,61.7:14:3:-35.25:35.68
1	56530674	13644:2	T	T[1:56530361[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=13644:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_56521501_56546501_16C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:39:35.3:35.3,0,61.7:14:3:-35.25:35.68
1	58630799	14040:2	C	]1:33010843]C	28	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=14040:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:33010843(+)-1:58630799(-)__1_58628501_58653501D;SPAN=25619956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81
1	58631258	78199:1	T	T[2:31823482[	52	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=78199:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:58631258(+)-2:31823482(-)__2_31801001_31826001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:15:4.8:52.8,4.8,0:0:18:-52.81:52.81
1	59491056	439496:1	T	[8:6678940[T	42	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA;MAPQ=45;MATEID=439496:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_6664001_6689001_35C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91
1	60822424	14479:1	A	]1:60822666]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=14479:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_60809001_60834001_4C;SPAN=242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:58:46.4:99.2,0,46.4:35:0:-100.3:100.3
1	60822666	14479:2	A	A[1:60822424[	99	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=14479:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_60809001_60834001_4C;SPAN=242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:58:46.4:99.2,0,46.4:35:0:-100.3:100.3
1	63956963	16730:1	C	C]1:70234741]	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=16730:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:63956963(+)-1:70234741(+)__1_70217001_70242001D;SPAN=6277778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:0:10:-29.91:29.91
1	64373280	15448:1	T	T]1:64389687]	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=15448:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:64373280(+)-1:64389687(+)__1_64386001_64411001D;SPAN=16407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
1	64389687	15448:2	T	T]1:64373280]	23	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=15448:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:64373280(+)-1:64389687(+)__1_64386001_64411001D;SPAN=16407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
1	65345199	17796:1	T	]1:74835106]T	56	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=17796:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:65345199(-)-1:74835106(+)__1_74823001_74848001D;SPAN=9489907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
1	70234741	16730:2	C	C]1:63956963]	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=16730:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:63956963(+)-1:70234741(+)__1_70217001_70242001D;SPAN=6277778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:0:10:-29.91:29.91
1	72339814	989548:1	C	C]Un_KN707820v1_decoy:8307]	62	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=989548:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_671_1_8307_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:6:5.7:62.7,5.7,0:21:0:-62.72:62.72
1	73903568	81804:1	T	]2:40869772]T	18	PASS	EVDNC=ASSMB;INSERTION=GAT;MAPQ=60;MATEID=81804:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40866001_40891001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
1	74835106	17796:2	C	C[1:65345199[	56	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=17796:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:65345199(-)-1:74835106(+)__1_74823001_74848001D;SPAN=9489907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
1	79184460	18692:1	A	]1:79184589]A	51	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=18692:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_79184001_79209001_0C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
1	79184589	18692:2	A	A[1:79184460[	51	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=18692:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_79184001_79209001_0C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
1	79756214	18804:1	G	G[1:79757394[	42	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=18804:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:79756214(+)-1:79757394(-)__1_79747501_79772501D;SPAN=1180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
1	79757394	18804:2	C	]1:79756214]C	42	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=18804:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:79756214(+)-1:79757394(-)__1_79747501_79772501D;SPAN=1180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
1	81194666	19073:1	T	T]1:81195873]	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=60;MATEID=19073:2;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_1_81193001_81218001_6C;SPAN=1207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:19:4:-69.32:69.32
1	81194672	19074:1	C	[1:81195686[C	24	PASS	EVDNC=ASSMB;INSERTION=ATTTTAAATTATTAAAAAA;MAPQ=60;MATEID=19074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_81193001_81218001_0C;SPAN=1014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
1	81195686	19074:2	T	[1:81194672[T	24	PASS	EVDNC=ASSMB;INSERTION=ATTTTAAATTATTAAAAAA;MAPQ=60;MATEID=19074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_81193001_81218001_0C;SPAN=1014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
1	81195873	19073:2	A	A]1:81194666]	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=60;MATEID=19073:1;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_1_81193001_81218001_6C;SPAN=1207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:19:4:-69.32:69.32
1	82660293	19398:1	C	C[1:82661887[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATGGTTCATGC;MAPQ=60;MATEID=19398:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_1_82638501_82663501_1C;SPAN=1594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:10:9:-42.91:42.91
1	82661887	19398:2	A	]1:82660293]A	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATGGTTCATGC;MAPQ=60;MATEID=19398:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_1_82638501_82663501_1C;SPAN=1594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:10:9:-42.91:42.91
1	83390671	407388:1	A	]7:76846695]A	16	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=407388:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390671(-)-7:76846695(+)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51
1	83390908	407389:1	T	T[7:76847406[	47	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=407389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390908(+)-7:76847406(-)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:0:17:-47.25:47.25
1	83426016	407403:1	G	]7:76882570]G	25	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=407403:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83426016(-)-7:76882570(+)__7_76881001_76906001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
1	83590531	19632:1	T	]1:83591652]T	69	PASS	EVDNC=ASSMB;INSERTION=TATCAA;MAPQ=60;MATEID=19632:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_83569501_83594501_12C;SPAN=1121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56
1	83591652	19632:2	T	T[1:83590531[	69	PASS	EVDNC=ASSMB;INSERTION=TATCAA;MAPQ=60;MATEID=19632:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_83569501_83594501_12C;SPAN=1121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56
1	84052256	19733:1	T	T[1:84058947[	48	PASS	EVDNC=ASSMB;HOMSEQ=TGATTTGTTTTTCT;MAPQ=60;MATEID=19733:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_84035001_84060001_6C;SPAN=6691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46
1	84058947	19733:2	T	]1:84052256]T	48	PASS	EVDNC=ASSMB;HOMSEQ=TGATTTGTTTTTCT;MAPQ=60;MATEID=19733:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_84035001_84060001_6C;SPAN=6691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46
1	86662852	20268:1	C	]1:86673324]C	27	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=20268:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86662852(-)-1:86673324(+)__1_86656501_86681501D;SPAN=10472;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
1	86663300	20269:1	C	C[1:86673647[	22	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=20269:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86663300(+)-1:86673647(-)__1_86656501_86681501D;SPAN=10347;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
1	86664107	20270:1	A	[1:86665916[A	20	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=20270:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86664107(-)-1:86665916(-)__1_86656501_86681501D;SPAN=1809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
1	86665916	20270:2	A	[1:86664107[A	20	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=20270:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86664107(-)-1:86665916(-)__1_86656501_86681501D;SPAN=1809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
1	86673324	20268:2	C	C[1:86662852[	27	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=20268:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86662852(-)-1:86673324(+)__1_86656501_86681501D;SPAN=10472;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
1	86673647	20269:2	G	]1:86663300]G	22	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=20269:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:86663300(+)-1:86673647(-)__1_86656501_86681501D;SPAN=10347;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
1	88297535	20596:1	A	]1:88386949]A	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=20596:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:88297535(-)-1:88386949(+)__1_88371501_88396501D;SPAN=89414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
1	88386949	20596:2	G	G[1:88297535[	25	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=20596:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:88297535(-)-1:88386949(+)__1_88371501_88396501D;SPAN=89414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
1	88507126	802912:1	T	[17:33736830[T	49	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=802912:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:88507126(-)-17:33736830(-)__17_33736501_33761501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51
1	88507142	802914:1	T	T]17:33737644]	52	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=802914:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_33736501_33761501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81
1	94841278	21975:1	T	]1:95183553]T	33	PASS	EVDNC=ASSMB;INSERTION=CTTAAACATTTAACATAAAG;MAPQ=60;MATEID=21975:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_95182501_95207501_1C;SPAN=342275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:11:0:-33.01:33.01
1	95183553	21975:2	A	A[1:94841278[	33	PASS	EVDNC=ASSMB;INSERTION=CTTAAACATTTAACATAAAG;MAPQ=60;MATEID=21975:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_95182501_95207501_1C;SPAN=342275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:11:0:-33.01:33.01
1	101895084	23464:1	A	]1:102015776]A	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=23464:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_101993501_102018501_8C;SPAN=120692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:9:8:-33.83:33.83
1	101901145	23420:2	G	[1:53954591[G	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=23420:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_101895501_101920501_8C;SPAN=47946554;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:8:3:-27.73:27.73
1	102015776	23464:2	T	T[1:101895084[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=23464:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_101993501_102018501_8C;SPAN=120692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:9:8:-33.83:33.83
1	102149200	23510:2	T	T[1:53954930[	39	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=23510:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_102140501_102165501_11C;SPAN=48194270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
1	103230510	219488:1	A	]4:19519813]A	75	PASS	DISC_MAPQ=0;EVDNC=TSI_G;HOMSEQ=ATACATACATATATATGTACATACATACATATATA;INSERTION=TATACGTACATACATACATATATACATACATATATACGTACATACATATATATGTACATACATACATACGTACATACATATATATGTACATACATACATATGTACATACATATATATGTACATACATACATAT;MAPQ=55;MATEID=219488:2;MATENM=4;NM=4;NUMPARTS=5;SCTG=c_4_19502001_19527001_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:5:6.9:75.9,6.9,0:24:5:-75.92:75.92
1	105473276	24459:1	T	T[1:105480775[	79	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=24459:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:105473276(+)-1:105480775(-)__1_105472501_105497501D;SPAN=7499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:4:7.2:79.2,7.2,0:0:26:-79.22:79.22
1	105480775	24459:2	G	]1:105473276]G	79	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=24459:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:105473276(+)-1:105480775(-)__1_105472501_105497501D;SPAN=7499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:4:7.2:79.2,7.2,0:0:26:-79.22:79.22
1	105943242	24579:1	A	]1:105943358]A	28	PASS	EVDNC=ASSMB;INSERTION=TCCTGTTGTGT;MAPQ=60;MATEID=24579:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_105938001_105963001_4C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
1	105943358	24579:2	G	G[1:105943242[	28	PASS	EVDNC=ASSMB;INSERTION=TCCTGTTGTGT;MAPQ=60;MATEID=24579:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_105938001_105963001_4C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
1	106192958	165185:1	A	]3:63948014]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=165185:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63945001_63970001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:53:14.7:161.7,14.7,0:49:0:-160.5:160.5
1	106260694	24645:1	T	T[17:60756794[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=24645:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106256501_106281501_135C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:87:1.2:0,1.2,221.1:5:2:1.348:12.76
1	106530936	24780:1	A	]20:47506404]A	41	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=24780:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106526001_106551001_55C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:89:41:41,0,182.9:20:0:-41:46.11
1	106630185	883008:1	C	]20:48074953]C	10	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=883008:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48069001_48094001_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:153:10:10,0,373.1:13:6:-9.809:31.08
1	106886633	25624:1	C	C[1:108105777[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=25624:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_64C;SPAN=1219144;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:38:72:75.5:105.2,0,75.5:38:0:-105.4:105.4
1	106943617	602819:1	G	[11:96004715[G	66	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=602819:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_95991001_96016001_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:12:6:66,6,0:18:14:-66.02:66.02
1	106982020	25023:1	G	[17:61814571[G	37	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=25023:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106967001_106992001_105C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:68:37.1:37.1,0,132.8:15:5:-37:40.1
1	107060056	26772:1	T	]1:111868101]T	27	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=26772:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_111867001_111892001_5C;SPAN=4808045;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:92:27.2:27.2,0,202.1:16:0:-26.96:34.89
1	107091117	25102:1	A	[20:47170985[A	43	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=25102:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107089501_107114501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:106:43.1:43.1,0,221.3:12:17:-42.83:49.86
1	107200026	27877:1	G	]1:114620454]G	0	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=27877:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_114611001_114636001_127C;SPAN=7420428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:175:2.8:0,2.8,445.6:14:0:2.977:25.49
1	107258745	25214:1	C	C]7:43049975]	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CACCACTGGGGCCCACCACTGT;MAPQ=60;MATEID=25214:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_107236501_107261501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:145:0.9:0,0.9,366.3:10:3:1.146:22.03
1	107264508	25218:1	A	A[20:47787044[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CATGACAGGACAGGAGGCTGGGGGGAA;MAPQ=60;MATEID=25218:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_107261001_107286001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:143:23.5:0,23.5,405.9:2:3:23.69:7.268
1	107571647	884509:1	G	[20:51129425[G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=884509:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51107001_51132001_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:38:10.5:115.5,10.5,0:22:32:-114.4:114.4
1	107577023	885591:1	A	A[20:53413597[	69	PASS	EVDNC=ASSMB;INSERTION=GTAAATA;MAPQ=60;MATEID=885591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_53410001_53435001_13C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
1	107584696	27430:1	C	[1:113807900[C	58	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=27430:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113802501_113827501_116C;SPAN=6223204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:75:58.1:58.1,0,130.7:7:17:-58.14:59.68
1	107860352	25484:1	T	T[1:107862863[	50	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=25484:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107849001_107874001_69C;SPAN=2511;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:69:50:50,0,122.6:21:0:-49.93:51.66
1	107862863	25484:2	A	]1:107860352]A	50	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=25484:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107849001_107874001_69C;SPAN=2511;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:69:50:50,0,122.6:21:0:-49.93:51.66
1	108105777	25624:2	C	]1:106886633]C	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=25624:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_64C;SPAN=1219144;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:38:72:75.5:105.2,0,75.5:38:0:-105.4:105.4
1	108106953	25634:1	C	C[20:47414043[	76	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=25634:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_99C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:46:36.8:76.4,0,36.8:27:0:-76.82:76.82
1	108824497	25945:1	T	T[1:108829337[	29	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=25945:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:108824497(+)-1:108829337(-)__1_108829001_108854001D;SPAN=4840;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
1	108829337	25945:2	T	]1:108824497]T	29	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=25945:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:108824497(+)-1:108829337(-)__1_108829001_108854001D;SPAN=4840;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
1	108952236	184409:1	T	]3:110694547]T	89	PASS	EVDNC=ASSMB;INSERTION=TTGCAG;MAPQ=60;MATEID=184409:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_110691001_110716001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:12:8.1:89.1,8.1,0:29:0:-89.12:89.12
1	109030610	25996:1	T	T[1:109032559[	43	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=25996:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_109025001_109050001_35C;SPAN=1949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8
1	109032559	25996:2	T	]1:109030610]T	43	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=25996:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_109025001_109050001_35C;SPAN=1949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8
1	109194083	508919:1	T	[9:104854285[T	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGTCTCCAGGACATTTTTGTATA;MAPQ=60;MATEID=508919:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104835501_104860501_16C;SPAN=-1;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:12:10:-45.49:45.49
1	109198402	504384:1	C	C[9:89437208[	42	PASS	EVDNC=ASSMB;INSERTION=ACCATATATATAAATGTATGGCTGGAGA;MAPQ=60;MATEID=504384:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_89425001_89450001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9
1	111822912	809881:1	T	[17:58962856[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=809881:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58947001_58972001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:50:105:99:135.5,0,128.9:34:28:-135.5:135.5
1	111868101	26772:2	G	G[1:107060056[	27	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=26772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_111867001_111892001_5C;SPAN=4808045;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:92:27.2:27.2,0,202.1:16:0:-26.96:34.89
1	112292483	26890:1	A	A[1:112295044[	92	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGGACACAAACAA;MAPQ=60;MATEID=26890:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_112283501_112308501_38C;SPAN=2561;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:16:8.4:92.4,8.4,0:30:0:-92.42:92.42
1	112295044	26890:2	A	]1:112292483]A	92	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGGACACAAACAA;MAPQ=60;MATEID=26890:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_112283501_112308501_38C;SPAN=2561;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:16:8.4:92.4,8.4,0:30:0:-92.42:92.42
1	113068804	27110:1	C	C[1:113071155[	72	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=27110:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113068804(+)-1:113071155(-)__1_113067501_113092501D;SPAN=2351;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62
1	113071155	27110:2	A	]1:113068804]A	72	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=27110:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113068804(+)-1:113071155(-)__1_113067501_113092501D;SPAN=2351;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62
1	113497297	27249:1	G	G[1:113503309[	39	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=27249:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113497297(+)-1:113503309(-)__1_113484001_113509001D;SPAN=6012;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77
1	113503309	27249:2	G	]1:113497297]G	39	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=27249:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113497297(+)-1:113503309(-)__1_113484001_113509001D;SPAN=6012;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77
1	113684515	591775:1	T	[11:59681933[T	46	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=591775:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_59682001_59707001_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:8:13:-46.21:46.21
1	113762203	27966:1	T	[1:114680592[T	36	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GTTGTAA;MAPQ=60;MATEID=27966:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_114660001_114685001_71C;SPAN=918389;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:151:36.8:36.8,0,343.7:17:13:-36.78:51.31
1	113786160	885592:1	A	[20:53431676[A	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=885592:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_53410001_53435001_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:24:12.6:138.6,12.6,0:31:26:-138.6:138.6
1	113786165	883730:1	T	T[20:49309026[	47	PASS	EVDNC=ASSMB;HOMSEQ=AGAT;MAPQ=60;MATEID=883730:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
1	113798539	27425:1	G	]3:62653401]G	15	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=27425:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113778001_113803001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
1	113801494	27426:1	T	T[3:64698562[	25	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=27426:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_113778001_113803001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06
1	113802953	27448:1	G	[1:113834992[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TGC;MAPQ=60;MATEID=27448:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113827001_113852001_40C;SPAN=32039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:79:73.7:123.2,0,73.7:23:30:-123.6:123.6
1	113807900	27430:2	T	[1:107584696[T	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=27430:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113802501_113827501_116C;SPAN=6223204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:75:58.1:58.1,0,130.7:7:17:-58.14:59.68
1	113813812	27442:1	C	[17:60735668[C	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=27442:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113802501_113827501_57C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:87:97.7:120.8,0,97.7:23:34:-120.9:120.9
1	113834992	27448:2	T	[1:113802953[T	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TGC;MAPQ=60;MATEID=27448:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113827001_113852001_40C;SPAN=32039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:79:73.7:123.2,0,73.7:23:30:-123.6:123.6
1	113905874	164554:1	T	]3:62730756]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=164554:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_62720001_62745001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:72:29.3:29.3,0,151.4:15:0:-29.28:34.02
1	114215076	164618:1	T	[3:62865047[T	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=T;INSERTION=GAATATGGAAGAACCCCCAAGAAATGTTTTGAACACAGTA;MAPQ=60;MATEID=164618:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_3_62842501_62867501_111C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:39:97:99:101.6,0,141.2:29:15:-101.5:101.9
1	114236570	164633:1	A	[3:62871544[A	96	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=164633:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_62867001_62892001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:81:96.2:96.2,0,106.1:26:15:-96.07:96.11
1	114491354	27803:1	G	]20:48030664]G	0	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=27803:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_114488501_114513501_55C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:130:13.2:0,13.2,353.1:7:0:13.44:11.51
1	114500909	27809:1	G	G[1:114501211[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTGGG;MAPQ=60;MATEID=27809:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_114488501_114513501_64C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:84:118:52.7:244.1,0,52.7:84:0:-251:251
1	114501211	27809:2	A	]1:114500909]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTGGG;MAPQ=60;MATEID=27809:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_114488501_114513501_64C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:84:118:52.7:244.1,0,52.7:84:0:-251:251
1	114616011	27881:1	C	[20:53736867[C	5	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=27881:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_114611001_114636001_102C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:145:5.6:5.6,0,358.7:9:8:-5.456:26.69
1	114620454	27877:2	G	G[1:107200026[	0	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=27877:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_114611001_114636001_127C;SPAN=7420428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:175:2.8:0,2.8,445.6:14:0:2.977:25.49
1	114680592	27966:2	G	[1:113762203[G	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTTGTAA;MAPQ=60;MATEID=27966:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_114660001_114685001_71C;SPAN=918389;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:151:36.8:36.8,0,343.7:17:13:-36.78:51.31
1	114690356	165075:1	C	C[3:63626756[	50	PASS	EVDNC=ASSMB;INSERTION=CAAAAGC;MAPQ=60;MATEID=165075:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63626501_63651501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:81:50:50,0,152.3:22:0:-49.85:52.82
1	114692386	27990:1	T	[20:48883196[T	2	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=27990:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_114684501_114709501_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:120:2.6:2.6,0,299.6:8:7:-2.58:20.71
1	114822463	881169:1	T	T[20:42447943[	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=881169:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42434001_42459001_33C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:51:41:14.1:155.1,14.1,0:51:0:-155.1:155.1
1	114957233	645044:1	T	]12:107973569]T	19	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=645044:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_107971501_107996501_49C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
1	116254645	883009:1	A	[20:48085502[A	1	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ACCT;MAPQ=60;MATEID=883009:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48069001_48094001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:147:1.6:1.6,0,368:8:9:-1.593:24.26
1	116328915	28737:1	A	]1:116588466]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=28737:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_116571001_116596001_24C;SPAN=259551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6
1	116588466	28737:2	G	G[1:116328915[	47	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=43;MATEID=28737:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_116571001_116596001_24C;SPAN=259551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6
1	118858672	115326:1	C	C]2:141095450]	42	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=115326:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:118858672(+)-2:141095450(+)__2_141071001_141096001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91
1	119016159	29566:1	T	T[1:119016468[	31	PASS	EVDNC=ASSMB;HOMSEQ=CAGTAATTCTT;MAPQ=60;MATEID=29566:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_118996501_119021501_109C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
1	119016468	29566:2	C	]1:119016159]C	31	PASS	EVDNC=ASSMB;HOMSEQ=CAGTAATTCTT;MAPQ=60;MATEID=29566:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_118996501_119021501_109C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
1	119717902	880606:1	G	[20:40861608[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=880606:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_40841501_40866501_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:52:21:14.4:158.4,14.4,0:29:38:-158.4:158.4
1	119844586	881265:1	G	]20:42679541]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881265:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_42679001_42704001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:27:11.1:122.1,11.1,0:40:0:-122.1:122.1
1	123059666	32735:1	T	T[1:123802270[	99	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=32735:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123059666(+)-1:123802270(-)__1_123798501_123823501D;SPAN=742604;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:24:9:99,9,0:0:33:-99.02:99.02
1	123283955	292697:1	G	G]5:49623939]	33	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=292697:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123283955(+)-5:49623939(+)__5_49612501_49637501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:0:11:-33.01:33.01
1	123508702	33738:1	G	]1:124397084]G	21	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=33738:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123508702(-)-1:124397084(+)__1_124386501_124411501D;SPAN=888382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
1	123802270	32735:2	G	]1:123059666]G	99	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=32735:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123059666(+)-1:123802270(-)__1_123798501_123823501D;SPAN=742604;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:24:9:99,9,0:0:33:-99.02:99.02
1	124397084	33738:2	G	G[1:123508702[	21	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=33738:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123508702(-)-1:124397084(+)__1_124386501_124411501D;SPAN=888382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
1	124801523	34161:1	G	]1:124809210]G	33	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=34161:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:124801523(-)-1:124809210(+)__1_124803001_124828001D;SPAN=7687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:1:3:33,3,0:0:11:-33.01:33.01
1	124809210	34161:2	C	C[1:124801523[	33	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=34161:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:124801523(-)-1:124809210(+)__1_124803001_124828001D;SPAN=7687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:1:3:33,3,0:0:11:-33.01:33.01
1	124977945	34306:1	N	N[1:124978327[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GCCGGAAATTGCTCCAAGCATCCACCTACATATCCTGCAAAGAAACTGTTTCTAAACAGCTCTCTCAAGAGGAAGGTGCAGCTCTGTGAGTTGAATGCACACATCACAAACAAATTCCTGAGAATGCTTCTGTCTAGTTTTTCTGTGAAGATATTTCCTTTTCCAACATAGGCTTCAAATCGCTCCAAATATCCAATTGCAGATTCTGCAAAAAGATTGTTT;MAPQ=60;MATEID=34306:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_1_124974501_124999501_30C;SPAN=382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:8:11.1:122.1,11.1,0:40:0:-122.1:122.1
1	124978327	34306:2	C	]1:124977945]C	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GCCGGAAATTGCTCCAAGCATCCACCTACATATCCTGCAAAGAAACTGTTTCTAAACAGCTCTCTCAAGAGGAAGGTGCAGCTCTGTGAGTTGAATGCACACATCACAAACAAATTCCTGAGAATGCTTCTGTCTAGTTTTTCTGTGAAGATATTTCCTTTTCCAACATAGGCTTCAAATCGCTCCAAATATCCAATTGCAGATTCTGCAAAAAGATTGTTT;MAPQ=60;MATEID=34306:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_1_124974501_124999501_30C;SPAN=382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:8:11.1:122.1,11.1,0:40:0:-122.1:122.1
1	125080586	34586:1	C	]1:125080769]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CATTCGAGTCCATT;MAPQ=60;MATEID=34586:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_1_125072501_125097501_328C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:299:57.5:0,57.5,868.1:8:0:57.64:10.7
1	125080769	34586:2	T	T[1:125080586[	0	PASS	EVDNC=ASSMB;HOMSEQ=CATTCGAGTCCATT;MAPQ=36;MATEID=34586:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_1_125072501_125097501_328C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:299:57.5:0,57.5,868.1:8:0:57.64:10.7
1	143864342	35280:1	T	T]1:207739629]	36	PASS	DISC_MAPQ=4;EVDNC=ASDIS;INSERTION=CTCC;MAPQ=17;MATEID=35280:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_143864001_143889001_6C;SPAN=63875287;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:9:6:-36.31:36.31
1	145815067	36638:1	G	]1:148070222]G	20	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=36638:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:145815067(-)-1:148070222(+)__1_148053501_148078501D;SPAN=2255155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25
1	147652890	36513:1	G	]1:147653211]G	17	PASS	DISC_MAPQ=11;EVDNC=ASDIS;HOMSEQ=GATCTCGGCTCACTGCAA;MAPQ=44;MATEID=36513:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_1_147637001_147662001_6C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:2:-17.06:20.24
1	147653211	36513:2	A	A[1:147652890[	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCTCGGCTCACTGCAA;MAPQ=60;MATEID=36513:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_1_147637001_147662001_6C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:2:-17.06:20.24
1	148070222	36638:2	T	T[1:145815067[	20	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=36638:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:145815067(-)-1:148070222(+)__1_148053501_148078501D;SPAN=2255155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25
1	150621245	295608:1	C	[5:56152290[C	26	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=295608:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:150621245(-)-5:56152290(-)__5_56129501_56154501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29
1	150718975	37741:1	T	T[1:150719294[	99	PASS	EVDNC=ASSMB;HOMSEQ=AGAATTCTCAATTAAT;MAPQ=60;MATEID=37741:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_150699501_150724501_40C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:35:14.7:161.7,14.7,0:53:0:-161.7:161.7
1	150719294	37741:2	A	]1:150718975]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AGAATTCTCAATTAAT;MAPQ=60;MATEID=37741:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_150699501_150724501_40C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:35:14.7:161.7,14.7,0:53:0:-161.7:161.7
1	151211760	38014:1	C	C[1:151212045[	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGCTTGCAGTGAGCCAAGATC;MAPQ=60;MATEID=38014:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151189501_151214501_60C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:55:2.1:0,2.1,141.9:4:0:2.256:7.112
1	151212045	38014:2	G	]1:151211760]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGCTTGCAGTGAGCCAAGATC;MAPQ=60;MATEID=38014:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151189501_151214501_60C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:55:2.1:0,2.1,141.9:4:0:2.256:7.112
1	151938858	38348:1	T	T[1:151939885[	10	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=38348:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151924501_151949501_25C;SPAN=1027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4
1	151939885	38348:2	C	]1:151938858]C	10	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=38348:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151924501_151949501_25C;SPAN=1027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4
1	151974841	38399:1	G	]1:152087871]G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38399:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:151974841(-)-1:152087871(+)__1_152071501_152096501D;SPAN=113030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09
1	152087871	38399:2	T	T[1:151974841[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38399:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:151974841(-)-1:152087871(+)__1_152071501_152096501D;SPAN=113030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09
1	152213285	38428:1	A	A[1:152214664[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGCCAGACCCATGTTGGCCGTAGCTGGAAGA;MAPQ=60;MATEID=38428:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_1_152194001_152219001_88C;SPAN=1379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:157:99:107.9,0,286.1:30:17:-107.7:112.3
1	152214664	38428:2	G	]1:152213285]G	99	PASS	DISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=GAGCCAGACCCATGTTGGCCGTAGCTGGAAGA;MAPQ=60;MATEID=38428:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_1_152194001_152219001_88C;SPAN=1379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:157:99:107.9,0,286.1:30:17:-107.7:112.3
1	152583177	38584:1	G	G[1:152615264[	99	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=38584:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:152583177(+)-1:152615264(-)__1_152610501_152635501D;SPAN=32087;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:4:9:99,9,0:0:33:-99.02:99.02
1	152615264	38584:2	T	]1:152583177]T	99	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=38584:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:152583177(+)-1:152615264(-)__1_152610501_152635501D;SPAN=32087;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:4:9:99,9,0:0:33:-99.02:99.02
1	153070710	38737:1	G	G[1:153093702[	23	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=38737:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153070710(+)-1:153093702(-)__1_153051501_153076501D;SPAN=22992;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
1	153071239	38741:1	G	]1:153094217]G	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153071239(-)-1:153094217(+)__1_153076001_153101001D;SPAN=22978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
1	153093702	38737:2	A	]1:153070710]A	23	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=38737:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153070710(+)-1:153093702(-)__1_153051501_153076501D;SPAN=22992;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
1	153094217	38741:2	G	G[1:153071239[	19	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=38741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153071239(-)-1:153094217(+)__1_153076001_153101001D;SPAN=22978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
1	153161232	38758:1	A	A[1:153161488[	99	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=38758:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_1_153149501_153174501_38C;SPAN=256;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8
1	153161488	38758:2	T	]1:153161232]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=38758:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_1_153149501_153174501_38C;SPAN=256;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8
1	154713957	39323:1	C	]1:154714620]C	44	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=39323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:154713957(-)-1:154714620(+)__1_154693001_154718001D;SPAN=663;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:40:44.9:44.9,0,54.8:0:17:-44.87:44.94
1	154714620	39323:2	T	T[1:154713957[	44	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=39323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:154713957(-)-1:154714620(+)__1_154693001_154718001D;SPAN=663;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:40:44.9:44.9,0,54.8:0:17:-44.87:44.94
1	155147370	39479:1	A	]1:155147439]A	78	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATAGATACATATTTAAATATGTAT;INSERTION=AATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATAAATATGTATCTATTTAATAGATACATATTTAAGTATCTATTT;MAPQ=60;MATEID=39479:2;MATENM=4;NM=4;NUMPARTS=4;SCTG=c_1_155134001_155159001_119C;SPAN=69;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:62:75.2:78.5,0,75.2:29:0:-78.3:78.3
1	155147439	39479:2	A	A[1:155147370[	78	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATAGATACATATTTAAATATGTAT;INSERTION=AATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATAAATATGTATCTATTTAATAGATACATATTTAAGTATCTATTT;MAPQ=60;MATEID=39479:1;MATENM=4;NM=4;NUMPARTS=4;SCTG=c_1_155134001_155159001_119C;SPAN=69;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:62:75.2:78.5,0,75.2:29:0:-78.3:78.3
1	155531284	39855:1	G	]1:156495760]G	33	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=39855:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_156481501_156506501_9C;SPAN=964476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:11:0:-33.01:33.01
1	156495760	39855:2	G	G[1:155531284[	33	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=39855:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_156481501_156506501_9C;SPAN=964476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:11:0:-33.01:33.01
1	156556931	39879:1	C	C[1:156559144[	46	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATTGAGTAGCTCAGC;MAPQ=60;MATEID=39879:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_156555001_156580001_74C;SPAN=2213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21
1	156559144	39879:2	A	]1:156556931]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATTGAGTAGCTCAGC;MAPQ=60;MATEID=39879:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_156555001_156580001_74C;SPAN=2213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21
1	157204074	40074:1	A	A[1:157205607[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTTATCAAATTT;MAPQ=60;MATEID=40074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_157192001_157217001_10C;SPAN=1533;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:6:5:-23.81:23.84
1	157205607	40074:2	A	]1:157204074]A	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTTATCAAATTT;MAPQ=60;MATEID=40074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_157192001_157217001_10C;SPAN=1533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:6:5:-23.81:23.84
1	157570871	40199:1	A	A[1:157571087[	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=40199:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_157559501_157584501_117C;SPAN=216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
1	157571087	40199:2	T	]1:157570871]T	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=40199:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_157559501_157584501_117C;SPAN=216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
1	157699943	318970:1	A	A[5:169468974[	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=318970:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_169466501_169491501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
1	158108318	46063:1	C	[1:178946978[C	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=46063:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_178923501_178948501_7C;SPAN=20838660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:19:8.7:95.7,8.7,0:17:19:-95.72:95.72
1	158441289	45917:1	A	A]1:178096153]	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=45917:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158441289(+)-1:178096153(+)__1_178090501_178115501D;SPAN=19654864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93
1	158991664	40561:1	A	A[1:158996411[	46	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=40561:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158991664(+)-1:158996411(-)__1_158980501_159005501D;SPAN=4747;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
1	158996411	40561:2	T	]1:158991664]T	46	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=40561:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158991664(+)-1:158996411(-)__1_158980501_159005501D;SPAN=4747;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
1	159050757	40583:1	T	T[1:159051098[	95	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTCCCCTCCCGCCTAATTTTTCACGTCCATGACTCTTTTTAGTTCCTGCCATTATTCAGATTGGAGAGCCTCTAACCTGGGCCCCTTCAGATTAGGAAAGTTTGTGGAGTCTTCCAGTGGCTGCCTTAATGATGTTTTTGCAACATAGTGCTGCTTCATTAGAAAGGGCTTTGCAATTTGGTTCTTTAAAATGCCCCTATCTACTAGAATGAGTTCCAACTGAAATCTCATGAAATCTAAGGTTTGTGGTTGAGACTATTCCTTACTCTGAATGCTAGTAATATGATTTTTTTCTCTATTTTTATTTTATTTGGTCACTGTCATATTAGGCAGGAGGGA;MAPQ=60;MATEID=40583:2;MATENM=6;NM=6;NUMPARTS=3;SCTG=c_1_159029501_159054501_5C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:21:8.7:95.7,8.7,0:32:0:-95.72:95.72
1	159051098	40583:2	T	]1:159050757]T	95	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTCCCCTCCCGCCTAATTTTTCACGTCCATGACTCTTTTTAGTTCCTGCCATTATTCAGATTGGAGAGCCTCTAACCTGGGCCCCTTCAGATTAGGAAAGTTTGTGGAGTCTTCCAGTGGCTGCCTTAATGATGTTTTTGCAACATAGTGCTGCTTCATTAGAAAGGGCTTTGCAATTTGGTTCTTTAAAATGCCCCTATCTACTAGAATGAGTTCCAACTGAAATCTCATGAAATCTAAGGTTTGTGGTTGAGACTATTCCTTACTCTGAATGCTAGTAATATGATTTTTTTCTCTATTTTTATTTTATTTGGTCACTGTCATATTAGGCAGGAGGGA;MAPQ=60;MATEID=40583:1;MATENM=6;NM=6;NUMPARTS=3;SCTG=c_1_159029501_159054501_5C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:21:8.7:95.7,8.7,0:32:0:-95.72:95.72
1	161481848	41076:1	G	G[1:161487634[	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=41076:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:161481848(+)-1:161487634(-)__1_161479501_161504501D;SPAN=5786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
1	161487634	41076:2	A	]1:161481848]A	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=41076:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:161481848(+)-1:161487634(-)__1_161479501_161504501D;SPAN=5786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
1	165582917	42054:1	T	T[1:165583115[	39	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TATGTGTATACATATACACATATATGT;MAPQ=60;MATEID=42054:2;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=TGTG;SCTG=c_1_165571001_165596001_23C;SPAN=198;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:7:3.6:39.6,3.6,0:13:0:-39.61:39.61
1	165583115	42054:2	T	]1:165582917]T	39	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TATGTGTATACATATACACATATATGT;MAPQ=60;MATEID=42054:1;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=TGTG;SCTG=c_1_165571001_165596001_23C;SPAN=198;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:7:3.6:39.6,3.6,0:13:0:-39.61:39.61
1	166564699	42673:1	A	[1:168370833[A	49	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=42673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_168364001_168389001_45C;SPAN=1806134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:15:7:-49.51:49.51
1	167056589	42402:1	A	]1:167057025]A	44	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=42402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:167056589(-)-1:167057025(+)__1_167041001_167066001D;SPAN=436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:41:44.6:44.6,0,57.8:0:17:-44.59:44.7
1	167057025	42402:2	G	G[1:167056589[	44	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=42402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:167056589(-)-1:167057025(+)__1_167041001_167066001D;SPAN=436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:41:44.6:44.6,0,57.8:0:17:-44.59:44.7
1	167120498	861891:1	A	A[20:6681439[	62	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=861891:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_6664001_6689001_24C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
1	168370833	42673:2	T	[1:166564699[T	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=42673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_168364001_168389001_45C;SPAN=1806134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:15:7:-49.51:49.51
1	168543261	42725:1	C	[1:168578878[C	21	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=42725:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543261(-)-1:168578878(-)__1_168560001_168585001D;SPAN=35617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36
1	168543770	42721:1	T	[1:168576851[T	22	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=42721:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543770(-)-1:168576851(-)__1_168535501_168560501D;SPAN=33081;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
1	168576851	42721:2	C	[1:168543770[C	22	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=42721:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543770(-)-1:168576851(-)__1_168535501_168560501D;SPAN=33081;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
1	168578878	42725:2	C	[1:168543261[C	21	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=42725:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543261(-)-1:168578878(-)__1_168560001_168585001D;SPAN=35617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36
1	169035123	42878:1	G	G[1:169035992[	47	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=42878:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_169025501_169050501_100C;SPAN=869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
1	169035992	42878:2	T	]1:169035123]T	47	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=42878:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_169025501_169050501_100C;SPAN=869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
1	169190799	42950:1	T	T[1:169191112[	32	PASS	EVDNC=ASSMB;HOMSEQ=GCAAGTGAACTGTTTCT;MAPQ=60;MATEID=42950:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_169172501_169197501_174C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
1	169191112	42950:2	G	]1:169190799]G	32	PASS	EVDNC=ASSMB;HOMSEQ=GCAAGTGAACTGTTTCT;MAPQ=60;MATEID=42950:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_169172501_169197501_174C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
1	169993658	43328:1	T	]1:169993838]T	74	PASS	EVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCCAGAT;MAPQ=60;MATEID=43328:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_169981001_170006001_70C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:41:28.1:74.3,0,28.1:26:0:-75.39:75.39
1	169993838	43328:2	T	T[1:169993658[	74	PASS	EVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCCAGAT;MAPQ=60;MATEID=43328:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_169981001_170006001_70C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:41:28.1:74.3,0,28.1:26:0:-75.39:75.39
1	171021024	43754:1	A	]1:171030867]A	21	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=43754:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:171021024(-)-1:171030867(+)__1_171010001_171035001D;SPAN=9843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:40:21.8:21.8,0,77.9:0:10:-21.77:23.59
1	171030867	43754:2	A	A[1:171021024[	21	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=43754:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:171021024(-)-1:171030867(+)__1_171010001_171035001D;SPAN=9843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:40:21.8:21.8,0,77.9:0:10:-21.77:23.59
1	171547927	43910:1	A	A[1:171548217[	3	PASS	EVDNC=ASSMB;HOMSEQ=CCTTGGCCTCCCAAAGTGCTGGGATTA;MAPQ=60;MATEID=43910:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_171524501_171549501_63C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753
1	171548217	43910:2	C	]1:171547927]C	3	PASS	EVDNC=ASSMB;HOMSEQ=CCTTGGCCTCCCAAAGTGCTGGGATTA;MAPQ=60;MATEID=43910:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_171524501_171549501_63C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753
1	173886819	44589:1	A	]1:173897273]A	59	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=44589:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_173876501_173901501_80C;SPAN=10454;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:47:56.3:59.6,0,56.3:22:0:-59.41:59.41
1	173897273	44589:2	G	G[1:173886819[	59	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=44589:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_173876501_173901501_80C;SPAN=10454;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:47:56.3:59.6,0,56.3:22:0:-59.41:59.41
1	174178577	44791:1	G	]1:174384561]G	18	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=44791:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_174366501_174391501_27C;SPAN=205984;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42
1	174319638	44748:1	A	]1:174320886]A	4	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=44748:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_174317501_174342501_30C;SPAN=1248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:55:4.4:4.4,0,133.1:3:6:-4.346:11.77
1	174320886	44748:2	G	G[1:174319638[	4	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=44748:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_174317501_174342501_30C;SPAN=1248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:55:4.4:4.4,0,133.1:3:6:-4.346:11.77
1	174384561	44791:2	A	A[1:174178577[	18	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=44791:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_174366501_174391501_27C;SPAN=205984;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42
1	174937737	999349:1	C	[Un_JTFH01000855v1_decoy:1[C	85	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGCCTGGG;INSERTION=AAAATTAGCTGGGTCTGGTGGCACATG;MAPQ=60;MATEID=999349:2;MATENM=1;NM=1;NUMPARTS=9;SCTG=c_1698_1_1088_0C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:9:7.8:85.8,7.8,0:28:0:-85.82:85.82
1	175231392	45123:1	T	T]1:175232880]	20	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=45123:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:175231392(+)-1:175232880(+)__1_175224001_175249001D;SPAN=1488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:43:20.9:20.9,0,86.9:0:10:-20.92:23.23
1	175232880	45123:2	G	G]1:175231392]	20	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=45123:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:175231392(+)-1:175232880(+)__1_175224001_175249001D;SPAN=1488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:43:20.9:20.9,0,86.9:0:10:-20.92:23.23
1	178095595	45920:1	A	]1:178102057]A	34	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=45920:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_178090501_178115501_73C;SPAN=6462;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3
1	178096153	45917:2	T	T]1:158441289]	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=45917:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158441289(+)-1:178096153(+)__1_178090501_178115501D;SPAN=19654864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93
1	178102057	45920:2	G	G[1:178095595[	34	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=45920:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_178090501_178115501_73C;SPAN=6462;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3
1	178946978	46063:2	T	[1:158108318[T	95	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=46063:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_178923501_178948501_7C;SPAN=20838660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:19:8.7:95.7,8.7,0:17:19:-95.72:95.72
1	179261094	46195:1	C	]1:179301500]C	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTTGGGCACA;MAPQ=60;MATEID=46195:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179291001_179316001_27C;SPAN=40406;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:20:14.3:14.3,0,34.1:3:4:-14.18:14.72
1	179301500	46195:2	G	G[1:179261094[	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTTGGGCACA;MAPQ=60;MATEID=46195:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179291001_179316001_27C;SPAN=40406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:20:14.3:14.3,0,34.1:3:4:-14.18:14.72
1	179638146	46431:1	A	A[1:179638925[	41	PASS	EVDNC=ASSMB;INSERTION=TCGTGGGTAAA;MAPQ=60;MATEID=46431:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179634001_179659001_25C;SPAN=779;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
1	179638925	46431:2	T	]1:179638146]T	41	PASS	EVDNC=ASSMB;INSERTION=TCGTGGGTAAA;MAPQ=60;MATEID=46431:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179634001_179659001_25C;SPAN=779;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
1	181698030	47398:1	G	G[1:182409037[	75	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=47398:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182402501_182427501_9C;SPAN=711007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92
1	182409037	47398:2	G	]1:181698030]G	75	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=47398:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182402501_182427501_9C;SPAN=711007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92
1	182451352	47412:1	G	]1:182451475]G	41	PASS	EVDNC=ASSMB;HOMSEQ=GAG;MAPQ=60;MATEID=47412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182427001_182452001_78C;SPAN=123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:54:41:41,0,93.8:17:0:-40.94:42.13
1	182451475	47412:2	G	G[1:182451352[	41	PASS	EVDNC=ASSMB;HOMSEQ=GAG;MAPQ=60;MATEID=47412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182427001_182452001_78C;SPAN=123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:54:41:41,0,93.8:17:0:-40.94:42.13
1	184309605	47956:1	G	G[1:184309908[	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGAAACTCTGATG;MAPQ=60;MATEID=47956:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_184289001_184314001_97C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:22:7.5:82.5,7.5,0:22:6:-82.52:82.52
1	184309908	47956:2	A	]1:184309605]A	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGAAACTCTGATG;MAPQ=60;MATEID=47956:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_184289001_184314001_97C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:22:7.5:82.5,7.5,0:22:6:-82.52:82.52
1	184845698	48124:1	T	T[1:184851643[	85	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=48124:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:184845698(+)-1:184851643(-)__1_184828001_184853001D;SPAN=5945;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:0:28:-85.82:85.82
1	184851643	48124:2	T	]1:184845698]T	85	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=48124:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:184845698(+)-1:184851643(-)__1_184828001_184853001D;SPAN=5945;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:0:28:-85.82:85.82
1	185403974	48241:1	C	C[1:185404303[	79	PASS	EVDNC=ASSMB;HOMSEQ=CCCAAGATTC;MAPQ=60;MATEID=48241:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_1_185391501_185416501_69C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22
1	185404303	48241:2	C	]1:185403974]C	79	PASS	EVDNC=ASSMB;HOMSEQ=CCCAAGATTC;MAPQ=60;MATEID=48241:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_1_185391501_185416501_69C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22
1	187495696	48778:1	T	T[1:187497598[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CCT;INSERTION=AATATGCTTTCTGTTTTTGGGTGTCACTCTCAATTTTTTTGAAACAATACATTTTTCCGTCTTACTTTAATTCATCCCTTGTCATCCATTTCTCATCCATTACATTCTAGCATTCATATCTATCCCTTCCCCACTGAAATCGATCTCACTAAGTCACTGATGTTCCCAAGTTTTTAACACAAGTTTCTGTCTTTGGTTTTCAGCCTAATTTTTTAGATATTACTACCAATAGAATGGTCTCCTGGATTT;MAPQ=60;MATEID=48778:2;MATENM=0;NM=3;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=1902;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:75:28:21:231,21,0:75:0:-231.1:231.1
1	187495696	48777:1	T	T]1:187497595]	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=48777:2;MATENM=0;NM=3;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_1_187474001_187499001_33C;SPAN=1899;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:57:29:15.9:174.9,15.9,0:48:16:-174.9:174.9
1	187497344	48780:1	A	[1:187497598[A	95	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CCT;MAPQ=60;MATEID=48780:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:26:8.7:95.7,8.7,0:32:0:-95.72:95.72
1	187497595	48777:2	T	T]1:187495696]	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=48777:1;MATENM=3;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_1_187474001_187499001_33C;SPAN=1899;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:57:29:15.9:174.9,15.9,0:48:16:-174.9:174.9
1	187497598	48780:2	C	[1:187497344[C	95	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CCT;MAPQ=60;MATEID=48780:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:26:8.7:95.7,8.7,0:32:0:-95.72:95.72
1	187497598	48778:2	C	]1:187495696]C	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CCT;INSERTION=AATATGCTTTCTGTTTTTGGGTGTCACTCTCAATTTTTTTGAAACAATACATTTTTCCGTCTTACTTTAATTCATCCCTTGTCATCCATTTCTCATCCATTACATTCTAGCATTCATATCTATCCCTTCCCCACTGAAATCGATCTCACTAAGTCACTGATGTTCCCAAGTTTTTAACACAAGTTTCTGTCTTTGGTTTTCAGCCTAATTTTTTAGATATTACTACCAATAGAATGGTCTCCTGGATTT;MAPQ=60;MATEID=48778:1;MATENM=3;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=1902;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:75:28:21:231,21,0:75:0:-231.1:231.1
1	187746975	48909:1	A	A[1:187753402[	59	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=48909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_187743501_187768501_130C;SPAN=6427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07
1	187753402	48909:2	G	]1:187746975]G	59	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=48909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_187743501_187768501_130C;SPAN=6427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07
1	188015229	49018:1	C	]1:188029002]C	33	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=49018:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:188015229(-)-1:188029002(+)__1_188013001_188038001D;SPAN=13773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:47:33.2:33.2,0,82.7:0:14:-33:34.28
1	188029002	49018:2	A	A[1:188015229[	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=49018:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:188015229(-)-1:188029002(+)__1_188013001_188038001D;SPAN=13773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:47:33.2:33.2,0,82.7:0:14:-33:34.28
1	188086594	805051:1	G	[17:44048921[G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGC;MAPQ=60;MATEID=805051:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44026501_44051501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:13:9:-49.51:49.51
1	188238750	49140:1	T	T[1:188238972[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATATAAAATATATATATATAAA;MAPQ=60;MATEID=49140:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_188233501_188258501_22C;SPAN=222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:12:9:99,9,0:29:4:-99.02:99.02
1	188238972	49140:2	A	]1:188238750]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATATAAAATATATATATATAAA;MAPQ=60;MATEID=49140:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_188233501_188258501_22C;SPAN=222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:12:9:99,9,0:29:4:-99.02:99.02
1	190868192	50402:1	T	T[1:190868361[	60	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=50402:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_190855001_190880001_71C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
1	190868361	50402:2	A	]1:190868192]A	60	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=50402:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_190855001_190880001_71C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
1	192830145	51140:1	A	A]1:193074178]	82	PASS	DISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=TTCACAATAGCAAAGACTTGGAACCA;MAPQ=43;MATEID=51140:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_192815001_192840001_40C;SPAN=244033;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:13:7.5:82.5,7.5,0:16:13:-82.52:82.52
1	193074178	51140:2	A	A]1:192830145]	82	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TTCACAATAGCAAAGACTTGGAACCA;MAPQ=31;MATEID=51140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_192815001_192840001_40C;SPAN=244033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:13:7.5:82.5,7.5,0:16:13:-82.52:82.52
1	195115153	51946:1	A	]1:195115296]A	75	PASS	EVDNC=ASSMB;INSERTION=ATAATAATAGTTTTAATGATATTTA;MAPQ=60;MATEID=51946:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_195093501_195118501_7C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88
1	195115296	51946:2	A	A[1:195115153[	75	PASS	EVDNC=ASSMB;INSERTION=ATAATAATAGTTTTAATGATATTTA;MAPQ=60;MATEID=51946:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_195093501_195118501_7C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88
1	195422180	52049:1	G	G[1:195422969[	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=52049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195412001_195437001_33C;SPAN=789;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
1	195422969	52049:2	G	]1:195422180]G	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=52049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195412001_195437001_33C;SPAN=789;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
1	195605433	52131:1	A	]1:195640364]A	25	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=52131:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195632501_195657501_26C;SPAN=34931;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
1	195640364	52131:2	A	A[1:195605433[	25	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=52131:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195632501_195657501_26C;SPAN=34931;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
1	196626791	52438:1	T	T[1:196627468[	26	PASS	EVDNC=ASSMB;INSERTION=TAAAATAGTAATTTAAAATAGTAATTTAAAATAGTAATTC;MAPQ=60;MATEID=52438:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_196612501_196637501_5C;SPAN=677;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
1	196627468	52438:2	A	]1:196626791]A	26	PASS	EVDNC=ASSMB;INSERTION=TAAAATAGTAATTTAAAATAGTAATTTAAAATAGTAATTC;MAPQ=60;MATEID=52438:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_196612501_196637501_5C;SPAN=677;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
1	196766665	52471:1	T	]1:196775958]T	31	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=52471:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:196766665(-)-1:196775958(+)__1_196759501_196784501D;SPAN=9293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31
1	196775958	52471:2	A	A[1:196766665[	31	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=52471:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:196766665(-)-1:196775958(+)__1_196759501_196784501D;SPAN=9293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31
1	197531390	52816:1	T	T[1:197534142[	58	PASS	EVDNC=ASSMB;HOMSEQ=AACAAATCTTTT;MAPQ=60;MATEID=52816:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_197519001_197544001_32C;SPAN=2752;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:87:58.1:58.1,0,160.4:25:0:-58.07:60.75
1	197534142	52816:2	A	]1:197531390]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AACAAATCTTTT;MAPQ=60;MATEID=52816:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_197519001_197544001_32C;SPAN=2752;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:87:58.1:58.1,0,160.4:25:0:-58.07:60.75
1	197544937	52839:1	A	[10:21717820[A	49	PASS	DISC_MAPQ=55;EVDNC=TSI_L;INSERTION=CCCTTCTCC;MAPQ=60;MATEID=52839:2;MATENM=0;NM=14;NUMPARTS=3;REPSEQ=CC;SCTG=c_1_197543501_197568501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:8:4.5:49.5,4.5,0:15:9:-49.51:49.51
1	197787659	52920:1	T	[1:197788855[T	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=52920:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_197788501_197813501_146C;SPAN=1196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:13:8.4:92.4,8.4,0:21:13:-92.42:92.42
1	197788855	52920:2	C	[1:197787659[C	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=52920:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_197788501_197813501_146C;SPAN=1196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:13:8.4:92.4,8.4,0:21:13:-92.42:92.42
1	198394972	53112:1	C	[1:198396527[C	27	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=46;MATEID=53112:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_198376501_198401501_35C;SPAN=1555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:33:27.2:27.2,0,53.6:6:8:-27.04:27.59
1	198396527	53112:2	T	[1:198394972[T	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=53112:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_198376501_198401501_35C;SPAN=1555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:33:27.2:27.2,0,53.6:6:8:-27.04:27.59
1	198411139	887423:1	T	T[20:58411089[	7	PASS	EVDNC=ASSMB;INSERTION=AAGAAAC;MAPQ=60;MATEID=887423:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58408001_58433001_70C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:68:7.4:7.4,0,162.5:8:0:-7.294:15.98
1	199469615	53457:1	A	A[1:199471106[	80	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATATTGGGTCTCA;MAPQ=60;MATEID=53457:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_199454501_199479501_28C;SPAN=1491;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76
1	199471106	53457:2	A	]1:199469615]A	80	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATATTGGGTCTCA;MAPQ=60;MATEID=53457:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_199454501_199479501_28C;SPAN=1491;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76
1	201509820	54322:1	T	]1:201560289]T	51	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=54322:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_201537001_201562001_61C;SPAN=50469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:10:14:-52.37:52.37
1	201560289	54322:2	T	T[1:201509820[	51	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=54322:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_201537001_201562001_61C;SPAN=50469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:10:14:-52.37:52.37
1	201763560	54467:1	G	G[1:202017203[	40	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=54467:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_202002501_202027501_0C;SPAN=253643;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65
1	201949360	69640:1	T	[2:5997703[T	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=69640:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_5978001_6003001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:8:5:-31.6:31.6
1	202017203	54467:2	T	]1:201763560]T	40	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=54467:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_202002501_202027501_0C;SPAN=253643;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65
1	202207989	69642:1	A	A]2:5987300]	26	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=69642:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:202207989(+)-2:5987300(+)__2_5978001_6003001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
1	202625106	723413:1	G	G[15:30173126[	31	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTGTGG;INSERTION=TGTTGTGTGTGGCCTGTAATAGG;MAPQ=60;MATEID=723413:2;MATENM=0;NM=1;NUMPARTS=3;REPSEQ=GTGTGTGT;SCTG=c_15_30159501_30184501_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:33:11:31,0,11:10:10:-31.29:31.29
1	203095218	54940:1	A	A[1:203096063[	41	PASS	EVDNC=ASSMB;INSERTION=TCCTATCTGTTT;MAPQ=60;MATEID=54940:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_203080501_203105501_70C;SPAN=845;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
1	203096063	54940:2	T	]1:203095218]T	41	PASS	EVDNC=ASSMB;INSERTION=TCCTATCTGTTT;MAPQ=60;MATEID=54940:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_203080501_203105501_70C;SPAN=845;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
1	203715212	55121:1	T	T[1:203717071[	56	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=55121:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:203715212(+)-1:203717071(-)__1_203693001_203718001D;SPAN=1859;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:24:3.2:56,0,3.2:0:19:-58.57:58.57
1	203717071	55121:2	G	]1:203715212]G	56	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=55121:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:203715212(+)-1:203717071(-)__1_203693001_203718001D;SPAN=1859;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:24:3.2:56,0,3.2:0:19:-58.57:58.57
1	205966752	55983:1	C	C[1:205967055[	53	PASS	EVDNC=ASSMB;HOMSEQ=AAGATAAAGGAGGC;MAPQ=60;MATEID=55983:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_205947001_205972001_100C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:33:27.2:53.6,0,27.2:19:0:-53.81:53.81
1	205967055	55983:2	A	]1:205966752]A	53	PASS	EVDNC=ASSMB;HOMSEQ=AAGATAAAGGAGGC;MAPQ=60;MATEID=55983:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_205947001_205972001_100C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:33:27.2:53.6,0,27.2:19:0:-53.81:53.81
1	206923997	56211:1	G	]1:206924644]G	60	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=56211:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:206923997(-)-1:206924644(+)__1_206902501_206927501D;SPAN=647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:43:47.3:60.5,0,47.3:0:22:-60.61:60.61
1	206924644	56211:2	T	T[1:206923997[	60	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=56211:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:206923997(-)-1:206924644(+)__1_206902501_206927501D;SPAN=647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:43:47.3:60.5,0,47.3:0:22:-60.61:60.61
1	207119002	56272:1	A	[1:207119851[A	48	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=AACAC;MAPQ=60;MATEID=56272:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=ACAC;SCTG=c_1_207098501_207123501_11C;SPAN=849;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:15:6:-48.46:48.46
1	207119017	56274:1	G	G[1:207119851[	62	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GAATTCATTCCAGTTTACAATGGTGGGCTTTACTCGCTCATCTTTGCAGGTTCCACGTTTGTCCTTGAAGCACTCAGTTCATGTCTATCTAACAC;MAPQ=60;MATEID=56274:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_1_207098501_207123501_11C;SPAN=834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:38:32.3:62,0,32.3:22:0:-62.39:62.39
1	207119851	56272:2	G	[1:207119002[G	48	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=AACAC;MAPQ=60;MATEID=56272:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=ACAC;SCTG=c_1_207098501_207123501_11C;SPAN=849;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:15:6:-48.46:48.46
1	207119851	56274:2	G	]1:207119017]G	62	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GAATTCATTCCAGTTTACAATGGTGGGCTTTACTCGCTCATCTTTGCAGGTTCCACGTTTGTCCTTGAAGCACTCAGTTCATGTCTATCTAACAC;MAPQ=60;MATEID=56274:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_1_207098501_207123501_11C;SPAN=834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:38:32.3:62,0,32.3:22:0:-62.39:62.39
1	207291869	56340:1	C	C[1:207293505[	20	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=56340:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207291869(+)-1:207293505(-)__1_207270001_207295001D;SPAN=1636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
1	207293505	56340:2	A	]1:207291869]A	20	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=56340:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207291869(+)-1:207293505(-)__1_207270001_207295001D;SPAN=1636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
1	207368688	56373:1	C	C[1:207372219[	54	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=56373:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207368688(+)-1:207372219(-)__1_207368001_207393001D;SPAN=3531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:30:21.2:54.2,0,21.2:0:19:-55.07:55.07
1	207372219	56373:2	C	]1:207368688]C	54	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=56373:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207368688(+)-1:207372219(-)__1_207368001_207393001D;SPAN=3531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:30:21.2:54.2,0,21.2:0:19:-55.07:55.07
1	207739629	35280:2	C	C]1:143864342]	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCC;MAPQ=60;MATEID=35280:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_143864001_143889001_6C;SPAN=63875287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:9:6:-36.31:36.31
1	209405199	56773:1	C	C[1:209405400[	12	PASS	EVDNC=ASSMB;HOMSEQ=TAC;MAPQ=60;MATEID=56773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_209401501_209426501_12C;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
1	209405400	56773:2	T	]1:209405199]T	12	PASS	EVDNC=ASSMB;HOMSEQ=TAC;MAPQ=60;MATEID=56773:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_209401501_209426501_12C;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
1	209904710	56838:1	A	A[1:209912633[	36	PASS	EVDNC=ASSMB;INSERTION=GAATTA;MAPQ=60;MATEID=56838:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_1_209891501_209916501_14C;SPAN=7923;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:12:0:-36.31:36.31
1	209912633	56838:2	G	]1:209904710]G	36	PASS	EVDNC=ASSMB;INSERTION=GAATTA;MAPQ=60;MATEID=56838:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_1_209891501_209916501_14C;SPAN=7923;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:12:0:-36.31:36.31
1	213160429	57479:1	T	]1:213170967]T	45	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TGCA;MAPQ=60;MATEID=57479:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_213150001_213175001_21C;SPAN=10538;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:12:12:-46.05:46.05
1	213170967	57479:2	A	A[1:213160429[	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCA;MAPQ=60;MATEID=57479:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_213150001_213175001_21C;SPAN=10538;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:12:12:-46.05:46.05
1	213512566	57547:1	T	[1:213625887[T	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=57547:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_213615501_213640501_20C;SPAN=113321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:11:6.3:69.3,6.3,0:17:9:-69.32:69.32
1	213512572	57548:1	T	T]1:213626164]	72	PASS	DISC_MAPQ=54;EVDNC=ASDIS;MAPQ=60;MATEID=57548:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_213615501_213640501_10C;SPAN=113592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:11:6.6:72.6,6.6,0:17:9:-72.62:72.62
1	213625887	57547:2	C	[1:213512566[C	69	PASS	DISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=55;MATEID=57547:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_213615501_213640501_20C;SPAN=113321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:11:6.3:69.3,6.3,0:17:9:-69.32:69.32
1	213626164	57548:2	A	A]1:213512572]	72	PASS	DISC_MAPQ=16;EVDNC=ASDIS;MAPQ=42;MATEID=57548:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_213615501_213640501_10C;SPAN=113592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:11:6.6:72.6,6.6,0:17:9:-72.62:72.62
1	214483362	57747:1	T	T]5:115842122]	28	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=57747:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:214483362(+)-5:115842122(+)__1_214473001_214498001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
1	214639551	57774:1	C	[20:57108067[C	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAG;MAPQ=60;MATEID=57774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_214620001_214645001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:21:5.7:62.7,5.7,0:14:9:-62.72:62.72
1	215441801	58040:1	A	]1:215442558]A	69	PASS	EVDNC=ASSMB;HOMSEQ=AAT;MAPQ=60;MATEID=58040:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_215428501_215453501_11C;SPAN=757;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:59:69.2:69.2,0,79.1:26:0:-69.24:69.28
1	215442558	58040:2	T	T[1:215441801[	69	PASS	EVDNC=ASSMB;HOMSEQ=AAT;MAPQ=60;MATEID=58040:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_215428501_215453501_11C;SPAN=757;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:59:69.2:69.2,0,79.1:26:0:-69.24:69.28
1	217284629	58620:1	C	C[1:217285059[	64	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=58620:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_217266001_217291001_80C;SPAN=430;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65
1	217285059	58620:2	T	]1:217284629]T	64	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=58620:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_217266001_217291001_80C;SPAN=430;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65
1	217677003	58748:1	A	]1:217682529]A	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTTATTATTTTAAATTATTAAAATATTATTATTTTAATAATTTAATATTATTAATAATAATTAATTAATATTATTAATTTAATATTATTAAAATAATATTAAAATATTATTAAAATATTATTTAAATTATTA;MAPQ=60;MATEID=58748:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217658001_217683001_8C;SPAN=5526;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:56:37.1:37.1,0,103.1:15:2:-37.08:38.84
1	217682529	58748:2	T	T[1:217677003[	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTTATTATTTTAAATTATTAAAATATTATTATTTTAATAATTTAATATTATTAATAATAATTAATTAATATTATTAATTTAATATTATTAAAATAATATTAAAATATTATTAAAATATTATTTAAATTATTA;MAPQ=60;MATEID=58748:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217658001_217683001_8C;SPAN=5526;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:56:37.1:37.1,0,103.1:15:2:-37.08:38.84
1	217744180	58785:1	C	C[1:217744483[	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATTTTC;MAPQ=60;MATEID=58785:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217731501_217756501_27C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07
1	217744483	58785:2	A	]1:217744180]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATTTTC;MAPQ=60;MATEID=58785:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217731501_217756501_27C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07
1	218009279	58916:1	A	A[1:218015252[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=58916:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:218009279(+)-1:218015252(-)__1_218001001_218026001D;SPAN=5973;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:11:9.3:102.3,9.3,0:0:34:-102.3:102.3
1	218015252	58916:2	C	]1:218009279]C	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=58916:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:218009279(+)-1:218015252(-)__1_218001001_218026001D;SPAN=5973;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:11:9.3:102.3,9.3,0:0:34:-102.3:102.3
1	218072296	58956:1	A	A[1:218073148[	56	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAGAA;MAPQ=60;MATEID=58956:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_218050001_218075001_13C;SPAN=852;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:34:26.9:56.6,0,26.9:20:0:-56.93:56.93
1	218073148	58956:2	A	]1:218072296]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAGAA;MAPQ=60;MATEID=58956:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_218050001_218075001_13C;SPAN=852;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:34:26.9:56.6,0,26.9:20:0:-56.93:56.93
1	223081189	60131:1	G	G]Un_JTFH01001976v1_decoy:2126]	52	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=60131:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_223072501_223097501_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81
1	223557417	60201:1	C	C[1:223608936[	23	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=60201:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:223557417(+)-1:223608936(-)__1_223587001_223612001D;SPAN=51519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:4:2.1:23.1,2.1,0:0:8:-23.11:23.11
1	223608936	60201:2	T	]1:223557417]T	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=60201:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:223557417(+)-1:223608936(-)__1_223587001_223612001D;SPAN=51519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:4:2.1:23.1,2.1,0:0:8:-23.11:23.11
1	224945988	60758:1	C	C[1:225060988[	46	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=60758:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:224945988(+)-1:225060988(-)__1_225057001_225082001D;SPAN=115000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21
1	225060988	60758:2	C	]1:224945988]C	46	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=60758:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:224945988(+)-1:225060988(-)__1_225057001_225082001D;SPAN=115000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21
1	225835379	400824:1	A	]7:66112826]A	23	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=400824:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:225835379(-)-7:66112826(+)__7_66101001_66126001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:36:23:23,0,65.9:0:10:-22.89:24.13
1	227836405	61932:1	C	C[1:227836705[	30	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAAGCTTCC;MAPQ=60;MATEID=61932:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_227825501_227850501_75C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
1	227836705	61932:2	A	]1:227836405]A	30	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAAGCTTCC;MAPQ=60;MATEID=61932:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_227825501_227850501_75C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
1	227927495	62260:1	C	]1:228934655]C	82	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=62260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_228928001_228953001_20C;SPAN=1007160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:15:7.5:82.5,7.5,0:27:0:-82.52:82.52
1	228154057	416704:1	G	[7:100470421[G	79	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=416704:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100450001_100475001_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:15:7.2:79.2,7.2,0:14:19:-79.22:79.22
1	228212126	62042:1	C	C[7:100658692[	20	PASS	EVDNC=ASSMB;INSERTION=TGGAGGGTTTGGGAGCCTGTCCA;MAPQ=60;MATEID=62042:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_228193001_228218001_63C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
1	228934655	62260:2	G	G[1:227927495[	82	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=62260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_228928001_228953001_20C;SPAN=1007160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:15:7.5:82.5,7.5,0:27:0:-82.52:82.52
1	230555216	62473:1	G	]1:230555362]G	21	PASS	EVDNC=ASSMB;HOMSEQ=GCCTGTAATCCCAGC;MAPQ=60;MATEID=62473:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_230545001_230570001_6C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23
1	230555362	62473:2	C	C[1:230555216[	21	PASS	EVDNC=ASSMB;HOMSEQ=GCCTGTAATCCCAGC;MAPQ=60;MATEID=62473:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_230545001_230570001_6C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23
1	232116541	62784:1	A	A]7:98344850]	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATTCTCCTGCCTCA;MAPQ=60;MATEID=62784:2;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_1_232113001_232138001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:14:2:-46.21:46.21
1	233826553	63177:1	T	T[1:233827866[	46	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=63177:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:233826553(+)-1:233827866(-)__1_233828001_233853001D;SPAN=1313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:0:4.2:46.2,4.2,0:0:16:-46.21:46.21
1	233827866	63177:2	A	]1:233826553]A	46	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=63177:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:233826553(+)-1:233827866(-)__1_233828001_233853001D;SPAN=1313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:0:4.2:46.2,4.2,0:0:16:-46.21:46.21
1	234776441	63373:2	A	[1:16725253[A	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=GCAGAAGCCGGCGGGATGGGGC;MAPQ=60;MATEID=63373:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_234759001_234784001_38C;SPAN=218051188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:81:22:22.5:247.5,22.5,0:52:53:-247.6:247.6
1	235078244	63458:1	G	]1:235078726]G	18	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=63458:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:235078244(-)-1:235078726(+)__1_235077501_235102501D;SPAN=482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76
1	235078726	63458:2	G	G[1:235078244[	18	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=63458:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:235078244(-)-1:235078726(+)__1_235077501_235102501D;SPAN=482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76
1	236958951	63979:1	A	A[1:236961747[	39	PASS	EVDNC=ASSMB;INSERTION=TTCTAGGAAGGAGGTGCACATC;MAPQ=60;MATEID=63979:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_236939501_236964501_2C;SPAN=2796;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61
1	236961747	63979:2	T	]1:236958951]T	39	PASS	EVDNC=ASSMB;INSERTION=TTCTAGGAAGGAGGTGCACATC;MAPQ=60;MATEID=63979:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_236939501_236964501_2C;SPAN=2796;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61
1	237031073	64001:1	C	C[1:237031884[	25	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=64001:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_237013001_237038001_32C;SPAN=811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99
1	237031884	64001:2	G	]1:237031073]G	25	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=64001:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_237013001_237038001_32C;SPAN=811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99
1	237402791	64097:1	A	A]1:237402976]	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237402791(+)-1:237402976(+)__1_237380501_237405501D;SPAN=185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
1	237402976	64097:2	A	A]1:237402791]	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237402791(+)-1:237402976(+)__1_237380501_237405501D;SPAN=185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
1	237925038	64246:1	T	]1:237966824]T	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64246:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237925038(-)-1:237966824(+)__1_237944001_237969001D;SPAN=41786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
1	237966824	64246:2	T	T[1:237925038[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64246:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237925038(-)-1:237966824(+)__1_237944001_237969001D;SPAN=41786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
1	239952717	64778:1	T	[1:239953384[T	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAGCTC;MAPQ=60;MATEID=64778:2;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_1_239953001_239978001_1C;SPAN=667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:19:18:-72.62:72.62
1	239953183	64780:1	T	T]1:239953450]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64780:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:239953183(+)-1:239953450(+)__1_239953001_239978001D;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
1	239953384	64778:2	C	[1:239952717[C	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAGCTC;MAPQ=60;MATEID=64778:1;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_1_239953001_239978001_1C;SPAN=667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:19:18:-72.62:72.62
1	239953450	64780:2	T	T]1:239953183]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64780:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:239953183(+)-1:239953450(+)__1_239953001_239978001D;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
1	241920572	65248:1	C	]1:241920722]C	72	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAGTGCTGG;MAPQ=60;MATEID=65248:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_241913001_241938001_3C;SPAN=150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58
1	241920722	65248:2	G	G[1:241920572[	72	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAGTGCTGG;MAPQ=60;MATEID=65248:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_241913001_241938001_3C;SPAN=150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58
1	242964495	65568:1	G	G[1:242965914[	49	PASS	DISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=65568:2;MATENM=19;NM=2;NUMPARTS=2;SCTG=c_1_242942001_242967001_8C;SPAN=1419;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:5:4.5:49.5,4.5,0:15:7:-49.51:49.51
1	242965914	65568:2	G	]1:242964495]G	49	PASS	DISC_MAPQ=21;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=65568:1;MATENM=2;NM=19;NUMPARTS=2;SCTG=c_1_242942001_242967001_8C;SPAN=1419;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:5:4.5:49.5,4.5,0:15:7:-49.51:49.51
1	243619556	65663:1	A	A[1:243620461[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=65663:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:243619556(+)-1:243620461(-)__1_243603501_243628501D;SPAN=905;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91
1	243620461	65663:2	A	]1:243619556]A	42	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=65663:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:243619556(+)-1:243620461(-)__1_243603501_243628501D;SPAN=905;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91
1	247687256	66816:1	G	G[1:247693206[	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=66816:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:247687256(+)-1:247693206(-)__1_247670501_247695501D;SPAN=5950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
1	247693206	66816:2	A	]1:247687256]A	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=66816:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:247687256(+)-1:247693206(-)__1_247670501_247695501D;SPAN=5950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
1	247888190	66912:1	T	T[1:247894337[	89	PASS	EVDNC=ASSMB;HOMSEQ=GCATGTATTTATTT;MAPQ=60;MATEID=66912:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_1_247891001_247916001_24C;SPAN=6147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12
1	247894337	66912:2	G	]1:247888190]G	89	PASS	EVDNC=ASSMB;HOMSEQ=GCATGTATTTATTT;MAPQ=60;MATEID=66912:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_1_247891001_247916001_24C;SPAN=6147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12
1	248752958	891075:1	A	A]21:6070645]	26	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=891075:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:248752958(+)-21:6070645(+)__21_6051501_6076501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:2:2.4:26.4,2.4,0:0:9:-26.41:26.41
2	1099575	67773:1	T	]2:1099681]T	56	PASS	EVDNC=ASSMB;HOMSEQ=TCTGAAGGTGGGTGTAGTGAGGGCAGT;MAPQ=60;MATEID=67773:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_2_1078001_1103001_15C;SPAN=106;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:44:53.6:56.9,0,53.6:21:0:-56.96:56.96
2	1099681	67773:2	T	T[2:1099575[	56	PASS	EVDNC=ASSMB;HOMSEQ=TCTGAAGGTGGGTGTAGTGAGGGCAGT;MAPQ=60;MATEID=67773:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_2_1078001_1103001_15C;SPAN=106;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:44:53.6:56.9,0,53.6:21:0:-56.96:56.96
2	1111743	67779:1	A	]2:1112592]A	37	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=67779:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:1111743(-)-2:1112592(+)__2_1102501_1127501D;SPAN=849;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:32:37.4:37.4,0,40.7:0:14:-37.22:37.25
2	1112592	67779:2	G	G[2:1111743[	37	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=67779:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:1111743(-)-2:1112592(+)__2_1102501_1127501D;SPAN=849;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:32:37.4:37.4,0,40.7:0:14:-37.22:37.25
2	1751730	68180:1	G	]2:1751781]G	86	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGAGGTCTTGAGGGTCCTCACCTTGTTAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGGGGTCTTGAGGGTCCTCACCTTGTGAGAGT;MAPQ=60;MATEID=68180:2;MATENM=1;NM=0;NUMPARTS=4;SCTG=c_2_1739501_1764501_123C;SPAN=51;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:69:86.3:86.3,0,86.3:32:0:-86.24:86.24
2	1751781	68180:2	T	T[2:1751730[	86	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGAGGTCTTGAGGGTCCTCACCTTGTTAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGGGGTCTTGAGGGTCCTCACCTTGTGAGAGT;MAPQ=60;MATEID=68180:1;MATENM=0;NM=1;NUMPARTS=4;SCTG=c_2_1739501_1764501_123C;SPAN=51;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:69:86.3:86.3,0,86.3:32:0:-86.24:86.24
2	2750138	68404:1	G	]2:2750607]G	19	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=68404:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:2750138(-)-2:2750607(+)__2_2744001_2769001D;SPAN=469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
2	2750607	68404:2	T	T[2:2750138[	19	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=68404:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:2750138(-)-2:2750607(+)__2_2744001_2769001D;SPAN=469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
2	3046153	996191:1	T	]Un_JTFH01000155v1_decoy:2887]T	69	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=996191:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_998_1_2887_0C;SPAN=-1;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:7:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	3046162	996192:1	T	T[Un_JTFH01000155v1_decoy:1[	59	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=996192:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_998_1_2887_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:6:5.4:59.4,5.4,0:20:0:-59.41:59.41
2	3046162	68513:1	T	T[Un_JTFH01000155v1_decoy:1[	72	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=68513:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_3038001_3063001_29C;SPAN=-1;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76
2	3141039	68552:1	G	]2:3141594]G	37	PASS	DISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=GTCCACTCCCACAGCCCCTCAATCAATGCTGATAGACATGGAATCAT;MAPQ=60;MATEID=68552:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_3136001_3161001_53C;SPAN=555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:10:4:-37.5:37.51
2	3141594	68552:2	T	T[2:3141039[	37	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GTCCACTCCCACAGCCCCTCAATCAATGCTGATAGACATGGAATCAT;MAPQ=27;MATEID=68552:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_3136001_3161001_53C;SPAN=555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:10:4:-37.5:37.51
2	3448579	68680:1	A	]2:3448762]A	15	PASS	EVDNC=ASSMB;HOMSEQ=AGGGCGTGGAGAGCAGCCGGTTAC;MAPQ=60;MATEID=68680:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_3430001_3455001_33C;SPAN=183;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
2	3448762	68680:2	C	C[2:3448579[	15	PASS	EVDNC=ASSMB;HOMSEQ=AGGGCGTGGAGAGCAGCCGGTTAC;MAPQ=60;MATEID=68680:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_3430001_3455001_33C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
2	3592332	760178:1	G	[16:31103571[G	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTCC;MAPQ=60;MATEID=760178:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_31090501_31115501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:8:2:-24.99:24.99
2	4274462	933497:1	C	[X:64512169[C	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=933497:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_64508501_64533501_2C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:7:5:-36.31:36.31
2	4733720	69159:1	A	A[2:4739767[	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAGATACTGCA;MAPQ=60;MATEID=69159:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_4728501_4753501_22C;SPAN=6047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:21:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	4739767	69159:2	A	]2:4733720]A	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAGATACTGCA;MAPQ=60;MATEID=69159:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_4728501_4753501_22C;SPAN=6047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:21:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	5022592	69326:1	A	]2:5023212]A	83	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=69326:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:5022592(-)-2:5023212(+)__2_5022501_5047501D;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:56:56.9:83.3,0,56.9:0:30:-83.54:83.54
2	5023212	69326:2	A	A[2:5022592[	83	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=69326:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:5022592(-)-2:5023212(+)__2_5022501_5047501D;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:56:56.9:83.3,0,56.9:0:30:-83.54:83.54
2	5347649	69456:1	T	T[2:5347903[	49	PASS	EVDNC=ASSMB;HOMSEQ=TCTTCTGAATTTCT;MAPQ=60;MATEID=69456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_5341001_5366001_85C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74
2	5347903	69456:2	T	]2:5347649]T	49	PASS	EVDNC=ASSMB;HOMSEQ=TCTTCTGAATTTCT;MAPQ=60;MATEID=69456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_5341001_5366001_85C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74
2	5987300	69642:2	G	G]1:202207989]	26	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=69642:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:202207989(+)-2:5987300(+)__2_5978001_6003001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
2	5997703	69640:2	T	[1:201949360[T	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=69640:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_5978001_6003001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:8:5:-31.6:31.6
2	6260376	69707:1	C	C[2:6262062[	50	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=69707:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_6247501_6272501_84C;SPAN=1686;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33
2	6262062	69707:2	A	]2:6260376]A	50	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=69707:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_6247501_6272501_84C;SPAN=1686;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33
2	6495945	69807:1	G	]2:6496024]G	36	PASS	EVDNC=ASSMB;HOMSEQ=GCTTC;MAPQ=32;MATEID=69807:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_6492501_6517501_61C;SPAN=79;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:47:36.5:36.5,0,79.4:15:0:-36.3:37.28
2	6496024	69807:2	C	C[2:6495945[	36	PASS	EVDNC=ASSMB;HOMSEQ=GCTTC;MAPQ=60;MATEID=69807:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_6492501_6517501_61C;SPAN=79;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:47:36.5:36.5,0,79.4:15:0:-36.3:37.28
2	6658148	69895:1	C	C[18:12202407[	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=69895:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:6658148(+)-18:12202407(-)__2_6639501_6664501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
2	9998890	70988:1	A	[13:85488927[A	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATATAT;MAPQ=60;MATEID=70988:2;MATENM=48;NM=0;NUMPARTS=2;SCTG=c_2_9996001_10021001_50C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:6:4.8:52.8,4.8,0:11:8:-52.81:52.81
2	10011510	70991:1	C	]2:10013339]C	25	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=70991:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10011510(-)-2:10013339(+)__2_9996001_10021001D;SPAN=1829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:39:25.4:25.4,0,71.6:0:11:-25.35:26.63
2	10013339	70991:2	T	T[2:10011510[	25	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=70991:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10011510(-)-2:10013339(+)__2_9996001_10021001D;SPAN=1829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:39:25.4:25.4,0,71.6:0:11:-25.35:26.63
2	10291379	71120:1	A	A[2:10291576[	65	PASS	EVDNC=ASSMB;INSERTION=TACGTATATACACATATATACGTATACATATACACGTATATATACATATATGTATACGTATACGTATACACGTATATATACATATG;MAPQ=60;MATEID=71120:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_10290001_10315001_45C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:27:2.3:65,0,2.3:22:0:-68.44:68.44
2	10291576	71120:2	T	]2:10291379]T	65	PASS	EVDNC=ASSMB;INSERTION=TACGTATATACACATATATACGTATACATATACACGTATATATACATATATGTATACGTATACGTATACACGTATATATACATATG;MAPQ=60;MATEID=71120:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_10290001_10315001_45C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:27:2.3:65,0,2.3:22:0:-68.44:68.44
2	10629240	71249:1	C	]2:10629728]C	13	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=71249:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10629240(-)-2:10629728(+)__2_10608501_10633501D;SPAN=488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36
2	10629241	71250:1	A	]2:10629638]A	35	PASS	EVDNC=ASSMB;INSERTION=TGCAAAGAAATGTAACAGAATTATTT;MAPQ=60;MATEID=71250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_10608501_10633501_34C;SPAN=397;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:49:35.9:35.9,0,85.4:15:0:-35.74:36.95
2	10629638	71250:2	A	A[2:10629241[	35	PASS	EVDNC=ASSMB;INSERTION=TGCAAAGAAATGTAACAGAATTATTT;MAPQ=60;MATEID=71250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_10608501_10633501_34C;SPAN=397;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:49:35.9:35.9,0,85.4:15:0:-35.74:36.95
2	10629728	71249:2	T	T[2:10629240[	13	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=71249:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10629240(-)-2:10629728(+)__2_10608501_10633501D;SPAN=488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36
2	11380447	71691:1	A	A[2:11380717[	45	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=71691:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_11368001_11393001_71C;SPAN=270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:39:45.2:45.2,0,51.8:17:0:-45.15:45.19
2	11380717	71691:2	G	]2:11380447]G	45	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=71691:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_11368001_11393001_71C;SPAN=270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:39:45.2:45.2,0,51.8:17:0:-45.15:45.19
2	11853890	71889:1	G	]2:11854829]G	13	PASS	DISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=GATGATGCAGGGTGAGTGCTTAGACCCACTGCTTCCAGAATGCCTGTGCATTCACCCCGATGATGCAGGGTGAG;MAPQ=35;MATEID=71889:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_2_11833501_11858501_84C;SPAN=939;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:8:2:-13.76:17.53
2	11854829	71889:2	G	G[2:11853890[	13	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GATGATGCAGGGTGAGTGCTTAGACCCACTGCTTCCAGAATGCCTGTGCATTCACCCCGATGATGCAGGGTGAG;MAPQ=18;MATEID=71889:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_2_11833501_11858501_84C;SPAN=939;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:8:2:-13.76:17.53
2	14239176	72679:1	T	T[2:14245877[	17	PASS	EVDNC=ASSMB;INSERTION=AACCTCACCT;MAPQ=60;MATEID=72679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14234501_14259501_51C;SPAN=6701;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
2	14245877	72679:2	C	]2:14239176]C	17	PASS	EVDNC=ASSMB;INSERTION=AACCTCACCT;MAPQ=60;MATEID=72679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14234501_14259501_51C;SPAN=6701;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
2	14391167	72772:1	C	C[2:14391495[	40	PASS	EVDNC=ASSMB;INSERTION=AATGTCA;MAPQ=60;MATEID=72772:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14381501_14406501_96C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
2	14391495	72772:2	T	]2:14391167]T	40	PASS	EVDNC=ASSMB;INSERTION=AATGTCA;MAPQ=60;MATEID=72772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14381501_14406501_96C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
2	14564047	72832:1	G	G[2:14569993[	62	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=72832:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14553001_14578001_5C;SPAN=5946;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:35:23.3:62.9,0,23.3:22:0:-63.65:63.65
2	14569993	72832:2	A	]2:14564047]A	62	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=72832:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14553001_14578001_5C;SPAN=5946;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:35:23.3:62.9,0,23.3:22:0:-63.65:63.65
2	15475786	73136:1	A	]2:15492424]A	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=73136:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_15484001_15509001_176C;SPAN=16638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:29:14.9:57.8,0,14.9:18:9:-59.26:59.26
2	15492424	73136:2	A	A[2:15475786[	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=73136:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_15484001_15509001_176C;SPAN=16638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:29:14.9:57.8,0,14.9:18:9:-59.26:59.26
2	16110969	73436:1	T	T[2:16111310[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTCTCCACCCTCCG;MAPQ=60;MATEID=73436:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_2_16096501_16121501_39C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:28:11.7:128.7,11.7,0:36:9:-128.7:128.7
2	16111310	73436:2	G	]2:16110969]G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTCTCCACCCTCCG;MAPQ=60;MATEID=73436:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_2_16096501_16121501_39C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:28:11.7:128.7,11.7,0:36:9:-128.7:128.7
2	16131544	73449:1	G	G[2:16133693[	46	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=73449:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16131544(+)-2:16133693(-)__2_16121001_16146001D;SPAN=2149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21
2	16133693	73449:2	A	]2:16131544]A	46	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=73449:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16131544(+)-2:16133693(-)__2_16121001_16146001D;SPAN=2149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21
2	16224895	73484:1	T	T]2:16225346]	20	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=73484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16224895(+)-2:16225346(+)__2_16219001_16244001D;SPAN=451;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:0:9:-20.43:21.63
2	16225346	73484:2	T	T]2:16224895]	20	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=73484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16224895(+)-2:16225346(+)__2_16219001_16244001D;SPAN=451;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:0:9:-20.43:21.63
2	18392977	74156:1	T	T[2:18393259[	30	PASS	EVDNC=ASSMB;HOMSEQ=GTGAAAGATCTTT;MAPQ=60;MATEID=74156:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_18375001_18400001_27C;SPAN=282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
2	18393259	74156:2	G	]2:18392977]G	30	PASS	EVDNC=ASSMB;HOMSEQ=GTGAAAGATCTTT;MAPQ=60;MATEID=74156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_18375001_18400001_27C;SPAN=282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
2	19412343	74443:1	T	]2:19424559]T	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=74443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:19412343(-)-2:19424559(+)__2_19404001_19429001D;SPAN=12216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:0:9:-18.75:20.87
2	19424559	74443:2	C	C[2:19412343[	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=74443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:19412343(-)-2:19424559(+)__2_19404001_19429001D;SPAN=12216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:0:9:-18.75:20.87
2	19567822	74511:1	T	T[2:19570802[	46	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=74511:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_19551001_19576001_28C;SPAN=2980;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
2	19570802	74511:2	G	]2:19567822]G	46	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=74511:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_19551001_19576001_28C;SPAN=2980;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
2	20466917	74769:1	G	G[2:20467212[	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATGCCATGTG;MAPQ=60;MATEID=74769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20457501_20482501_24C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:12:5:-51.34:51.34
2	20467212	74769:2	A	]2:20466917]A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATGCCATGTG;MAPQ=60;MATEID=74769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20457501_20482501_24C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:12:5:-51.34:51.34
2	20809619	74841:1	C	]2:20845442]C	37	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=74841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20825001_20850001_18C;SPAN=35823;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78
2	20845442	74841:2	A	A[2:20809619[	37	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=74841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20825001_20850001_18C;SPAN=35823;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78
2	21964098	75152:1	A	]2:21970342]A	19	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=75152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21952001_21977001_1C;SPAN=6244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48
2	21970342	75152:2	C	C[2:21964098[	19	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=75152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21952001_21977001_1C;SPAN=6244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48
2	21986910	75157:1	C	]2:21995787]C	27	PASS	EVDNC=ASSMB;INSERTION=AATT;MAPQ=60;MATEID=75157:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21976501_22001501_19C;SPAN=8877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:12:0:-27.24:28.84
2	21995787	75157:2	G	G[2:21986910[	27	PASS	EVDNC=ASSMB;INSERTION=AATT;MAPQ=60;MATEID=75157:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21976501_22001501_19C;SPAN=8877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:12:0:-27.24:28.84
2	26333431	989648:1	A	[Un_KN707840v1_decoy:1[A	89	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=989648:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_691_1_3298_13C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:10:8.1:89.1,8.1,0:29:0:-89.12:89.12
2	26714469	996560:1	G	]Un_JTFH01000208v1_decoy:2601]G	82	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=996560:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1051_1_2601_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:7:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	30640060	77857:1	C	]2:30738106]C	33	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=77857:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_30723001_30748001_4C;SPAN=98046;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:23:23.3:33.2,0,23.3:12:0:-33.21:33.21
2	30738106	77857:2	C	C[2:30640060[	33	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=77857:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_30723001_30748001_4C;SPAN=98046;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:23:23.3:33.2,0,23.3:12:0:-33.21:33.21
2	31119875	77958:1	G	G[2:31120175[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATAATGAGCTAG;MAPQ=60;MATEID=77958:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_31115001_31140001_98C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:30:8.4:92.4,8.4,0:22:10:-92.42:92.42
2	31120175	77958:2	A	]2:31119875]A	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATAATGAGCTAG;MAPQ=60;MATEID=77958:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_31115001_31140001_98C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:30:8.4:92.4,8.4,0:22:10:-92.42:92.42
2	31423208	769777:1	A	[16:70087940[A	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=769777:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_70070001_70095001_81C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:14:9.6:105.6,9.6,0:26:21:-105.6:105.6
2	31823482	78199:2	T	]1:58631258]T	52	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=78199:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:58631258(+)-2:31823482(-)__2_31801001_31826001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:15:4.8:52.8,4.8,0:0:18:-52.81:52.81
2	32866671	78642:1	T	T[2:32870557[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAATATTCCAT;MAPQ=60;MATEID=78642:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_32854501_32879501_56C;SPAN=3886;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:11:12:-59.38:59.38
2	32870557	78642:2	A	]2:32866671]A	56	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAATATTCCAT;MAPQ=60;MATEID=78642:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_32854501_32879501_56C;SPAN=3886;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:11:12:-59.38:59.38
2	32999395	78690:1	A	A[2:33002226[	72	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=78690:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_33001501_33026501_15C;SPAN=2831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
2	33002226	78690:2	C	]2:32999395]C	72	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=78690:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_33001501_33026501_15C;SPAN=2831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
2	33894159	926022:1	T	[X:11714296[T	17	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=926022:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_11711001_11736001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:3:5:-17.49:17.74
2	34298589	79234:1	G	G[2:34300653[	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=79234:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_34300001_34325001_16C;SPAN=2064;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:10:9.6:105.6,9.6,0:35:0:-105.6:105.6
2	34300653	79234:2	G	]2:34298589]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=79234:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_34300001_34325001_16C;SPAN=2064;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:10:9.6:105.6,9.6,0:35:0:-105.6:105.6
2	34418581	79317:1	T	T[2:34418871[	89	PASS	EVDNC=ASSMB;HOMSEQ=AACTCTCTTGGAATTTCT;MAPQ=60;MATEID=79317:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_34398001_34423001_92C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:15:8.1:89.1,8.1,0:29:0:-89.12:89.12
2	34418871	79317:2	A	]2:34418581]A	89	PASS	EVDNC=ASSMB;HOMSEQ=AACTCTCTTGGAATTTCT;MAPQ=60;MATEID=79317:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_34398001_34423001_92C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:15:8.1:89.1,8.1,0:29:0:-89.12:89.12
2	35865456	80027:1	A	A[2:35865762[	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATAAAGAGAAA;MAPQ=60;MATEID=80027:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_35843501_35868501_176C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:13:6:-49.68:49.68
2	35865762	80027:2	A	]2:35865456]A	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATAAAGAGAAA;MAPQ=60;MATEID=80027:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_35843501_35868501_176C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:13:6:-49.68:49.68
2	36728531	80380:1	T	T[2:36728834[	47	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAAAAAATATT;MAPQ=60;MATEID=80380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_36725501_36750501_23C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
2	36728834	80380:2	A	]2:36728531]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAAAAAATATT;MAPQ=60;MATEID=80380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_36725501_36750501_23C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
2	37848471	80767:1	C	]2:37848614]C	8	PASS	EVDNC=ASSMB;INSERTION=ATT;MAPQ=60;MATEID=80767:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_37828001_37853001_4C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73
2	37848614	80767:2	T	T[2:37848471[	8	PASS	EVDNC=ASSMB;INSERTION=ATT;MAPQ=60;MATEID=80767:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_37828001_37853001_4C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73
2	37874819	80820:1	G	]2:38031160]G	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=80820:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_38024001_38049001_2C;SPAN=156341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:8:7:-32.06:32.06
2	38031160	80820:2	T	T[2:37874819[	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=80820:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_38024001_38049001_2C;SPAN=156341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:8:7:-32.06:32.06
2	40326783	81573:1	G	]2:40368222]G	30	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=81573:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_40351501_40376501_18C;SPAN=41439;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
2	40368222	81573:2	G	G[2:40326783[	30	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=81573:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_40351501_40376501_18C;SPAN=41439;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
2	40670800	81728:1	C	]2:40734469]C	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=81728:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40719001_40744001_102C;SPAN=63669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:6:10:-29:29.05
2	40734469	81728:2	T	T[2:40670800[	29	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=81728:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40719001_40744001_102C;SPAN=63669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:6:10:-29:29.05
2	40869772	81804:2	T	T[1:73903568[	18	PASS	EVDNC=ASSMB;INSERTION=GAT;MAPQ=60;MATEID=81804:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40866001_40891001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
2	41011229	81856:1	A	A[2:41023154[	36	PASS	EVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=81856:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_41013001_41038001_41C;SPAN=11925;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31
2	41023154	81856:2	A	]2:41011229]A	36	PASS	EVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=81856:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_41013001_41038001_41C;SPAN=11925;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31
2	41825584	234074:1	T	T[4:65548212[	49	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=234074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:41825584(+)-4:65548212(-)__4_65537501_65562501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51
2	42431514	82399:1	A	]2:42651232]A	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGT;MAPQ=60;MATEID=82399:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_42630001_42655001_20C;SPAN=219718;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:6:8:-35.78:35.78
2	42651232	82399:2	T	T[2:42431514[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGT;MAPQ=60;MATEID=82399:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_42630001_42655001_20C;SPAN=219718;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:6:8:-35.78:35.78
2	43431646	82614:1	T	T[2:43432156[	6	PASS	EVDNC=ASSMB;HOMSEQ=AATTTTTTGTACTTTT;MAPQ=60;MATEID=82614:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_43414001_43439001_54C;SPAN=510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:36:6.5:6.5,0,82.4:5:0:-6.386:10.37
2	43432156	82614:2	A	]2:43431646]A	6	PASS	EVDNC=ASSMB;HOMSEQ=AATTTTTTGTACTTTT;MAPQ=60;MATEID=82614:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_43414001_43439001_54C;SPAN=510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:36:6.5:6.5,0,82.4:5:0:-6.386:10.37
2	44240073	82829:1	C	C[2:44241692[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=82829:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:44240073(+)-2:44241692(-)__2_44222501_44247501D;SPAN=1619;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91
2	44241692	82829:2	A	]2:44240073]A	42	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=82829:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:44240073(+)-2:44241692(-)__2_44222501_44247501D;SPAN=1619;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91
2	47092142	948741:1	G	[X:154456620[G	56	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=948741:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_154448001_154473001_7C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:12:9:-56.11:56.11
2	47385991	83671:1	C	]2:47440172]C	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=83671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_47432001_47457001_26C;SPAN=54181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21
2	47440172	83671:2	T	T[2:47385991[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=83671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_47432001_47457001_26C;SPAN=54181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21
2	47582850	914841:1	T	[22:23853676[T	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=914841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_79C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:15:2:-49.48:49.48
2	48624053	84132:1	A	A[2:48630814[	58	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=84132:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_48608001_48633001_62C;SPAN=6761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
2	48630814	84132:2	T	]2:48624053]T	58	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=84132:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_48608001_48633001_62C;SPAN=6761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
2	49385759	84300:1	T	T[2:49386067[	89	PASS	EVDNC=ASSMB;HOMSEQ=CAATATTTTTACTCTT;MAPQ=60;MATEID=84300:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_49367501_49392501_53C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:24:8.1:89.1,8.1,0:29:0:-89.12:89.12
2	49386067	84300:2	C	]2:49385759]C	89	PASS	EVDNC=ASSMB;HOMSEQ=CAATATTTTTACTCTT;MAPQ=60;MATEID=84300:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_49367501_49392501_53C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:24:8.1:89.1,8.1,0:29:0:-89.12:89.12
2	49597021	84369:1	A	A[2:49597348[	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=84369:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49588001_49613001_28C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
2	49597348	84369:2	A	]2:49597021]A	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=84369:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49588001_49613001_28C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
2	49725367	84398:1	T	]2:49726478]T	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCA;MAPQ=60;MATEID=84398:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49710501_49735501_34C;SPAN=1111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:39:38.6:38.6,0,58.4:11:11:-38.55:38.8
2	49726478	84398:2	A	A[2:49725367[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCA;MAPQ=60;MATEID=84398:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49710501_49735501_34C;SPAN=1111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:39:38.6:38.6,0,58.4:11:11:-38.55:38.8
2	49836216	84429:1	G	]2:49842728]G	23	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=84429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49833001_49858001_8C;SPAN=6512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
2	49842728	84429:2	G	G[2:49836216[	23	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=84429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49833001_49858001_8C;SPAN=6512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
2	50587435	84741:1	T	T]2:50589480]	52	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=84741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:50587435(+)-2:50589480(+)__2_50568001_50593001D;SPAN=2045;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81
2	50589480	84741:2	C	C]2:50587435]	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=84741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:50587435(+)-2:50589480(+)__2_50568001_50593001D;SPAN=2045;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81
2	54338356	85639:1	G	G[2:54340337[	99	PASS	EVDNC=ASSMB;INSERTION=TAA;MAPQ=60;MATEID=85639:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_54316501_54341501_38C;SPAN=1981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:21:11.7:128.7,11.7,0:42:0:-128.7:128.7
2	54340337	85639:2	A	]2:54338356]A	99	PASS	EVDNC=ASSMB;INSERTION=TAA;MAPQ=60;MATEID=85639:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_54316501_54341501_38C;SPAN=1981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:21:11.7:128.7,11.7,0:42:0:-128.7:128.7
2	54466357	85680:1	T	T[2:54466606[	49	PASS	EVDNC=ASSMB;HOMSEQ=AAGTATGTTTATTCTT;MAPQ=60;MATEID=85680:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_54463501_54488501_20C;SPAN=249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:60:49.1:49.1,0,101.9:20:0:-49.15:50.17
2	54466606	85680:2	A	]2:54466357]A	49	PASS	EVDNC=ASSMB;HOMSEQ=AAGTATGTTTATTCTT;MAPQ=60;MATEID=85680:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_54463501_54488501_20C;SPAN=249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:60:49.1:49.1,0,101.9:20:0:-49.15:50.17
2	55567377	86186:1	T	]2:55678660]T	21	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=86186:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55664001_55689001_27C;SPAN=111283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4
2	55633365	86159:1	G	G[2:55633523[	28	PASS	EVDNC=ASSMB;HOMSEQ=TCCCAGCTACTGGGGAGGCTGAG;MAPQ=60;MATEID=86159:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_55615001_55640001_46C;SPAN=158;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
2	55633523	86159:2	T	]2:55633365]T	28	PASS	EVDNC=ASSMB;HOMSEQ=TCCCAGCTACTGGGGAGGCTGAG;MAPQ=60;MATEID=86159:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_55615001_55640001_46C;SPAN=158;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
2	55678660	86186:2	C	C[2:55567377[	21	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=86186:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55664001_55689001_27C;SPAN=111283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4
2	55843973	86245:1	A	A[2:55844263[	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=86245:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55835501_55860501_48C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:28:9.3:102.3,9.3,0:26:10:-102.3:102.3
2	55844263	86245:2	A	]2:55843973]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=86245:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55835501_55860501_48C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:28:9.3:102.3,9.3,0:26:10:-102.3:102.3
2	57115608	86554:1	T	T[2:57115922[	35	PASS	EVDNC=ASSMB;HOMSEQ=GCTAGTAGCTTTTT;MAPQ=60;MATEID=86554:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_57109501_57134501_28C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78
2	57115922	86554:2	G	]2:57115608]G	35	PASS	EVDNC=ASSMB;HOMSEQ=GCTAGTAGCTTTTT;MAPQ=60;MATEID=86554:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_57109501_57134501_28C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78
2	61473639	87757:1	T	[2:61476025[T	55	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCAGCCTCCCCAGTAGCTGGGA;MAPQ=60;MATEID=87757:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_61470501_61495501_64C;SPAN=2386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:27:12.2:55.1,0,12.2:14:10:-56.6:56.6
2	61476025	87757:2	C	[2:61473639[C	55	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCAGCCTCCCCAGTAGCTGGGA;MAPQ=60;MATEID=87757:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_61470501_61495501_64C;SPAN=2386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:27:12.2:55.1,0,12.2:14:10:-56.6:56.6
2	65580385	89177:1	T	T[2:65580684[	85	PASS	EVDNC=ASSMB;HOMSEQ=CATGTTACTTTT;MAPQ=60;MATEID=89177:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_65562001_65587001_72C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:16:7.8:85.8,7.8,0:28:0:-85.82:85.82
2	65580684	89177:2	C	]2:65580385]C	85	PASS	EVDNC=ASSMB;HOMSEQ=CATGTTACTTTT;MAPQ=60;MATEID=89177:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_65562001_65587001_72C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:16:7.8:85.8,7.8,0:28:0:-85.82:85.82
2	66278462	89363:1	T	T[2:66280422[	19	PASS	EVDNC=ASSMB;HOMSEQ=TATAT;MAPQ=60;MATEID=89363:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_66272501_66297501_17C;SPAN=1960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
2	66280422	89363:2	T	]2:66278462]T	19	PASS	EVDNC=ASSMB;HOMSEQ=TATAT;MAPQ=60;MATEID=89363:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_66272501_66297501_17C;SPAN=1960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
2	66762898	89508:1	T	]2:66763041]T	65	PASS	EVDNC=ASSMB;HOMSEQ=TATATGTGTGTATATATA;MAPQ=60;MATEID=89508:2;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_2_66762501_66787501_12C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36
2	66763041	89508:2	A	A[2:66762898[	65	PASS	EVDNC=ASSMB;HOMSEQ=TATATGTGTGTATATATA;MAPQ=60;MATEID=89508:1;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_2_66762501_66787501_12C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36
2	68687723	297711:1	T	T]5:65172244]	26	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=297711:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:68687723(+)-5:65172244(+)__5_65170001_65195001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7
2	68687747	90165:2	T	T[1:37472656[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATTAG;MAPQ=60;MATEID=90165:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:9:10:-42.24:42.24
2	68687751	90166:2	C	]1:37472775]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CCAG;MAPQ=60;MATEID=90166:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_68673501_68698501_111C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:18:5.1:56.1,5.1,0:19:0:-56.11:56.11
2	70434172	556451:1	T	T]10:77573728]	10	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ATAGAATAGAATAGAATAG;INSERTION=C;MAPQ=60;MATEID=556451:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATA;SCTG=c_10_77567001_77592001_32C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:3.4:10.3,0,3.4:2:9:-10.19:10.19
2	71662937	91046:1	T	]2:71663041]T	40	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTG;MAPQ=60;MATEID=91046:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_71662501_71687501_16C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96
2	71663041	91046:2	G	G[2:71662937[	40	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTG;MAPQ=60;MATEID=91046:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_71662501_71687501_16C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96
2	74269063	91744:1	A	]2:74518704]A	29	PASS	EVDNC=ASSMB;INSERTION=TC;MAPQ=60;MATEID=91744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_74504501_74529501_22C;SPAN=249641;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
2	74518704	91744:2	T	T[2:74269063[	29	PASS	EVDNC=ASSMB;INSERTION=TC;MAPQ=60;MATEID=91744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_74504501_74529501_22C;SPAN=249641;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
2	74561101	652191:1	A	[12:126832129[A	51	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=CTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCT;MAPQ=37;MATEID=652191:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_12_126812001_126837001_50C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:27:15.5:51.8,0,15.5:12:4:-52.86:52.86
2	76299386	92375:1	T	T[2:76301768[	66	PASS	EVDNC=ASSMB;HOMSEQ=GTTTTCCATGTTTT;MAPQ=60;MATEID=92375:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_76293001_76318001_29C;SPAN=2382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:22:0:-66.02:66.02
2	76301768	92375:2	G	]2:76299386]G	66	PASS	EVDNC=ASSMB;HOMSEQ=GTTTTCCATGTTTT;MAPQ=60;MATEID=92375:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_76293001_76318001_29C;SPAN=2382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:22:0:-66.02:66.02
2	76546427	92510:1	T	T[2:76548327[	99	PASS	EVDNC=ASSMB;INSERTION=TTATTCTTTTA;MAPQ=60;MATEID=92510:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_76538001_76563001_108C;SPAN=1900;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:21:10.2:112.2,10.2,0:37:0:-112.2:112.2
2	76548327	92510:2	A	]2:76546427]A	99	PASS	EVDNC=ASSMB;INSERTION=TTATTCTTTTA;MAPQ=60;MATEID=92510:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_76538001_76563001_108C;SPAN=1900;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:21:10.2:112.2,10.2,0:37:0:-112.2:112.2
2	77890765	92950:1	A	A[2:77891232[	59	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=92950:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_77885501_77910501_43C;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:25:2.9:59,0,2.9:20:0:-61.85:61.85
2	77891232	92950:2	A	]2:77890765]A	59	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=92950:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_77885501_77910501_43C;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:25:2.9:59,0,2.9:20:0:-61.85:61.85
2	78714738	93188:1	A	A[2:78715161[	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=93188:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_78694001_78719001_1C;SPAN=423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
2	78715161	93188:2	A	]2:78714738]A	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=93188:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_78694001_78719001_1C;SPAN=423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
2	78830532	93233:1	T	T[2:78830858[	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGAGTTTCTT;MAPQ=60;MATEID=93233:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_78816501_78841501_72C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:27:18.8:48.5,0,18.8:11:7:-49.21:49.21
2	78830858	93233:2	A	]2:78830532]A	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGAGTTTCTT;MAPQ=60;MATEID=93233:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_78816501_78841501_72C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:27:18.8:48.5,0,18.8:11:7:-49.21:49.21
2	82135166	94181:1	C	C[2:82135354[	49	PASS	EVDNC=ASSMB;HOMSEQ=CTATCTATCTATC;MAPQ=60;MATEID=94181:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_82124001_82149001_9C;SPAN=188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:25:12.8:49.1,0,12.8:17:0:-50.18:50.18
2	82135354	94181:2	C	]2:82135166]C	49	PASS	EVDNC=ASSMB;HOMSEQ=CTATCTATCTATC;MAPQ=60;MATEID=94181:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_82124001_82149001_9C;SPAN=188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:25:12.8:49.1,0,12.8:17:0:-50.18:50.18
2	83176495	94386:1	T	T[2:83178048[	35	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=94386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_83177501_83202501_120C;SPAN=1553;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
2	83178048	94386:2	G	]2:83176495]G	35	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=94386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_83177501_83202501_120C;SPAN=1553;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
2	85291998	94967:1	T	T[2:85292320[	29	PASS	EVDNC=ASSMB;HOMSEQ=GGTCATATGTATTTTT;MAPQ=60;MATEID=94967:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_85284501_85309501_12C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:71:29.6:29.6,0,148.4:15:0:-29.56:34.13
2	85292320	94967:2	G	]2:85291998]G	29	PASS	EVDNC=ASSMB;HOMSEQ=GGTCATATGTATTTTT;MAPQ=60;MATEID=94967:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_85284501_85309501_12C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:71:29.6:29.6,0,148.4:15:0:-29.56:34.13
2	85486995	922294:1	C	]22:49029656]C	26	PASS	DISC_MAPQ=15;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=922294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_49024501_49049501_90C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:7:4:-26.41:26.41
2	85510440	95053:1	C	C[2:85510844[	5	PASS	EVDNC=ASSMB;HOMSEQ=GTGATCCGCCCACCTCGGC;MAPQ=60;MATEID=95053:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_85505001_85530001_92C;SPAN=404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:40:5.3:5.3,0,94.4:5:0:-5.261:10.13
2	85510844	95053:2	G	]2:85510440]G	5	PASS	EVDNC=ASSMB;HOMSEQ=GTGATCCGCCCACCTCGGC;MAPQ=60;MATEID=95053:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_85505001_85530001_92C;SPAN=404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:40:5.3:5.3,0,94.4:5:0:-5.261:10.13
2	87411927	95712:1	A	]2:87415975]A	35	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=95712:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:87411927(-)-2:87415975(+)__2_87391501_87416501D;SPAN=4048;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:50:35.6:35.6,0,88.4:0:15:-35.46:36.79
2	87415975	95712:2	G	G[2:87411927[	35	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=95712:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:87411927(-)-2:87415975(+)__2_87391501_87416501D;SPAN=4048;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:50:35.6:35.6,0,88.4:0:15:-35.46:36.79
2	88301312	96152:1	T	T[2:88301624[	40	PASS	EVDNC=ASSMB;HOMSEQ=GAGACCTACTTTCTT;MAPQ=60;MATEID=96152:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_88298001_88323001_127C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
2	88301624	96152:2	G	]2:88301312]G	40	PASS	EVDNC=ASSMB;HOMSEQ=GAGACCTACTTTCTT;MAPQ=60;MATEID=96152:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_88298001_88323001_127C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
2	88729728	96278:1	G	G[2:88732766[	30	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATATTAAAACTAAG;MAPQ=60;MATEID=96278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_88714501_88739501_14C;SPAN=3038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:68:30.5:30.5,0,139.4:15:0:-30.4:34.45
2	88732766	96278:2	G	]2:88729728]G	30	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATATTAAAACTAAG;MAPQ=60;MATEID=96278:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_88714501_88739501_14C;SPAN=3038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:68:30.5:30.5,0,139.4:15:0:-30.4:34.45
2	90371363	96983:1	T	T[10:15915313[	92	PASS	DISC_MAPQ=1;EVDNC=ASDIS;INSERTION=TTTTTTTTTA;MAPQ=14;MATEID=96983:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_90356001_90381001_107C;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:81:92.9:92.9,0,109.4:27:14:-92.77:92.86
2	91409350	97080:1	A	A]16:34954400]	99	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=97080:2;MATENM=2;NM=5;NUMPARTS=2;SCTG=c_2_91385001_91410001_138C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:38:10.5:115.5,10.5,0:27:15:-115.5:115.5
2	91412660	97181:1	C	C[2:91412842[	55	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATCATC;INSERTION=TCGAATGGAATCATCATTGAGTGTAATCGAATGG;MAPQ=60;MATEID=97181:2;MATENM=3;NM=2;NUMPARTS=3;SCTG=c_2_91409501_91434501_201C;SECONDARY;SPAN=182;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:157:55.1:55.1,0,338.9:30:0:-54.9:66.78
2	91412842	97181:2	A	]2:91412660]A	55	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATCATC;INSERTION=TCGAATGGAATCATCATTGAGTGTAATCGAATGG;MAPQ=60;MATEID=97181:1;MATENM=2;NM=3;NUMPARTS=3;SCTG=c_2_91409501_91434501_201C;SECONDARY;SPAN=182;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:157:55.1:55.1,0,338.9:30:0:-54.9:66.78
2	91530893	97619:1	T	]2:91531369]T	51	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TTTATGTTATATATAATATAAACATGATGTATATTCTTAT;MAPQ=12;MATEID=97619:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_91507501_91532501_165C;SPAN=476;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:112:51.2:51.2,0,229.4:24:4:-51.04:57.56
2	91531369	97619:2	T	T[2:91530893[	51	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TTTATGTTATATATAATATAAACATGATGTATATTCTTAT;MAPQ=15;MATEID=97619:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_91507501_91532501_165C;SPAN=476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:112:51.2:51.2,0,229.4:24:4:-51.04:57.56
2	92308749	98845:1	A	]2:93108543]A	19	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=98845:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92308749(-)-2:93108543(+)__2_93100001_93125001D;SPAN=799794;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
2	92651208	98625:1	A	A[2:92867362[	24	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=98625:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92651208(+)-2:92867362(-)__2_92855001_92880001D;SPAN=216154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74
2	92743347	98519:1	C	C[2:94054277[	14	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=98519:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92743347(+)-2:94054277(-)__2_92732501_92757501D;SPAN=1310930;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:42:14.6:14.6,0,90.5:0:8:-14.6:17.8
2	92867362	98625:2	T	]2:92651208]T	24	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=98625:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92651208(+)-2:92867362(-)__2_92855001_92880001D;SPAN=216154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74
2	92875179	98636:1	G	G[2:93532754[	37	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=98636:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92875179(+)-2:93532754(-)__2_92855001_92880001D;SPAN=657575;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44
2	93108543	98845:2	T	T[2:92308749[	19	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=98845:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92308749(-)-2:93108543(+)__2_93100001_93125001D;SPAN=799794;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
2	93450067	99624:1	A	A[2:94089858[	22	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99624:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93450067(+)-2:94089858(-)__2_94080001_94105001D;SPAN=639791;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
2	93469219	99143:1	T	]2:93647620]T	26	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99143:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93469219(-)-2:93647620(+)__2_93467501_93492501D;SPAN=178401;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
2	93532754	98636:2	C	]2:92875179]C	37	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=98636:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92875179(+)-2:93532754(-)__2_92855001_92880001D;SPAN=657575;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44
2	93574645	99223:1	G	]2:93889839]G	39	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=99223:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93574645(-)-2:93889839(+)__2_93565501_93590501D;SPAN=315194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61
2	93647620	99143:2	T	T[2:93469219[	26	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=99143:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93469219(-)-2:93647620(+)__2_93467501_93492501D;SPAN=178401;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
2	93889839	99223:2	A	A[2:93574645[	39	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=99223:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93574645(-)-2:93889839(+)__2_93565501_93590501D;SPAN=315194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61
2	94038860	99636:1	T	]2:94087446]T	29	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=99636:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94038860(-)-2:94087446(+)__2_94080001_94105001D;SPAN=48586;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1
2	94054277	98519:2	T	]2:92743347]T	14	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=98519:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92743347(+)-2:94054277(-)__2_92732501_92757501D;SPAN=1310930;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:42:14.6:14.6,0,90.5:0:8:-14.6:17.8
2	94087446	99636:2	C	C[2:94038860[	29	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99636:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94038860(-)-2:94087446(+)__2_94080001_94105001D;SPAN=48586;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1
2	94089858	99624:2	A	]2:93450067]A	22	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=99624:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93450067(+)-2:94089858(-)__2_94080001_94105001D;SPAN=639791;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
2	94189122	99662:1	C	]20:27295507]C	50	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=99662:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94189122(-)-20:27295507(+)__2_94178001_94203001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:0:18:-51.49:51.49
2	94520458	99799:1	T	T[2:94537151[	61	PASS	DISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=ACATCACAAAGAAGTTTCTGAGAATGCTTCT;MAPQ=56;MATEID=99799:2;MATENM=0;NM=11;NUMPARTS=2;SCTG=c_2_94496501_94521501_88C;SPAN=16693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:29:11.6:61.1,0,11.6:9:14:-63.06:63.06
2	94537151	99799:2	A	]2:94520458]A	61	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ACATCACAAAGAAGTTTCTGAGAATGCTTCT;MAPQ=47;MATEID=99799:1;MATENM=11;NM=0;NUMPARTS=2;SCTG=c_2_94496501_94521501_88C;SPAN=16693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:29:11.6:61.1,0,11.6:9:14:-63.06:63.06
2	95544969	100172:1	A	[2:95545592[A	87	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=100172:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95544969(-)-2:95545592(-)__2_95525501_95550501D;SPAN=623;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:53:44.6:87.5,0,44.6:0:31:-88.13:88.13
2	95545592	100172:2	C	[2:95544969[C	87	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=100172:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95544969(-)-2:95545592(-)__2_95525501_95550501D;SPAN=623;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:53:44.6:87.5,0,44.6:0:31:-88.13:88.13
2	95830277	100286:1	C	]2:95957789]C	39	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=100286:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_95942001_95967001_156C;SPAN=127512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:36:39.5:39.5,0,49.4:15:0:-39.4:39.48
2	95957789	100286:2	T	T[2:95830277[	39	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=100286:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_95942001_95967001_156C;SPAN=127512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:36:39.5:39.5,0,49.4:15:0:-39.4:39.48
2	95974103	100699:1	A	]2:97572285]A	25	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=100699:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95974103(-)-2:97572285(+)__2_97559001_97584001D;SPAN=1598182;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
2	96816191	100522:1	A	]2:96984406]A	39	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=100522:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_96971001_96996001_45C;SPAN=168215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18
2	96984406	100522:2	A	A[2:96816191[	39	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=100522:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_96971001_96996001_45C;SPAN=168215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18
2	97123668	100702:1	T	[2:97579760[T	21	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=100702:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97123668(-)-2:97579760(-)__2_97559001_97584001D;SPAN=456092;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23
2	97194623	100638:1	A	[2:97545900[A	52	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=100638:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97194623(-)-2:97545900(-)__2_97191501_97216501D;SPAN=351277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:0:18:-53.39:53.39
2	97204302	100643:1	G	G[2:97208123[	5	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=100643:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97204302(+)-2:97208123(-)__2_97191501_97216501D;SPAN=3821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:75:5.3:5.3,0,183.5:0:8:-5.326:15.61
2	97208123	100643:2	A	]2:97204302]A	5	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=100643:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97204302(+)-2:97208123(-)__2_97191501_97216501D;SPAN=3821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:75:5.3:5.3,0,183.5:0:8:-5.326:15.61
2	97545900	100638:2	A	[2:97194623[A	52	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=100638:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97194623(-)-2:97545900(-)__2_97191501_97216501D;SPAN=351277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:0:18:-53.39:53.39
2	97572285	100699:2	A	A[2:95974103[	25	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=100699:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95974103(-)-2:97572285(+)__2_97559001_97584001D;SPAN=1598182;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
2	97579760	100702:2	T	[2:97123668[T	21	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=100702:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97123668(-)-2:97579760(-)__2_97559001_97584001D;SPAN=456092;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23
2	98616869	100962:1	C	]2:98691677]C	24	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=100962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_98686001_98711001_0C;SPAN=74808;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
2	98691677	100962:2	T	T[2:98616869[	24	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=100962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_98686001_98711001_0C;SPAN=74808;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
2	101616122	101893:1	C	C[2:101617126[	69	PASS	EVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=101893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_101601501_101626501_121C;SPAN=1004;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:27:0.9:69.3,0.9,0:23:0:-72.66:72.66
2	101617126	101893:2	A	]2:101616122]A	69	PASS	EVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=101893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_101601501_101626501_121C;SPAN=1004;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:27:0.9:69.3,0.9,0:23:0:-72.66:72.66
2	102706037	102218:1	C	C[2:102706360[	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATGAGTTCC;MAPQ=60;MATEID=102218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_102704001_102729001_71C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
2	102706360	102218:2	A	]2:102706037]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATGAGTTCC;MAPQ=60;MATEID=102218:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_102704001_102729001_71C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
2	104544191	102679:1	A	A[2:104549876[	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=102679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_104541501_104566501_111C;SPAN=5685;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
2	104549876	102679:2	A	]2:104544191]A	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=102679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_104541501_104566501_111C;SPAN=5685;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
2	106078622	103313:1	T	T[2:106079439[	38	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=103313:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_106060501_106085501_2C;SPAN=817;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
2	106079439	103313:2	T	]2:106078622]T	38	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=103313:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_106060501_106085501_2C;SPAN=817;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
2	108694098	104171:1	C	C[2:108695654[	50	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=104171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_108682001_108707001_109C;SPAN=1556;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01
2	108695654	104171:2	C	]2:108694098]C	50	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=104171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_108682001_108707001_109C;SPAN=1556;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01
2	110818831	104698:1	T	T[2:110819060[	40	PASS	EVDNC=ASSMB;HOMSEQ=TGAT;MAPQ=60;MATEID=104698:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_110813501_110838501_12C;SPAN=229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98
2	110819060	104698:2	T	]2:110818831]T	40	PASS	EVDNC=ASSMB;HOMSEQ=TGAT;MAPQ=60;MATEID=104698:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_110813501_110838501_12C;SPAN=229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98
2	112957280	105463:1	T	]2:113032263]T	25	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=105463:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_113018501_113043501_75C;SPAN=74983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:10:0:-25.7:25.87
2	113032263	105463:2	C	C[2:112957280[	25	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=105463:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_113018501_113043501_75C;SPAN=74983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:10:0:-25.7:25.87
2	113393765	105599:1	G	G[2:113396035[	99	PASS	DISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=AAAAACAGTATTGCTG;MAPQ=60;MATEID=105599:2;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_2_113386001_113411001_46C;SPAN=2270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:115:7:32.1:353.1,32.1,0:94:22:-353.2:353.2
2	113396035	105599:2	A	]2:113393765]A	99	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=AAAAACAGTATTGCTG;MAPQ=60;MATEID=105599:1;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_2_113386001_113411001_46C;SPAN=2270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:115:7:32.1:353.1,32.1,0:94:22:-353.2:353.2
2	114785557	106020:1	T	T[2:114785773[	28	PASS	EVDNC=ASSMB;INSERTION=GTTTGTTGTTCAGAATTTATTGTACTTTATT;MAPQ=60;MATEID=106020:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_114782501_114807501_13C;SPAN=216;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:12:0:-28.37:29.43
2	114785773	106020:2	A	]2:114785557]A	28	PASS	EVDNC=ASSMB;INSERTION=GTTTGTTGTTCAGAATTTATTGTACTTTATT;MAPQ=60;MATEID=106020:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_114782501_114807501_13C;SPAN=216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:12:0:-28.37:29.43
2	115619092	517334:1	G	]9:128694869]G	27	PASS	EVDNC=ASSMB;HOMSEQ=GTCTCT;MAPQ=60;MATEID=517334:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_9_128674001_128699001_56C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77
2	115619217	517337:1	A	A]9:128696493]	48	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=517337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:115619217(+)-9:128696493(+)__9_128674001_128699001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:0:17:-48.77:48.77
2	115904500	106447:1	G	G[2:115905081[	65	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=106447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_115885001_115910001_118C;SPAN=581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93
2	115905081	106447:2	A	]2:115904500]A	65	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=106447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_115885001_115910001_118C;SPAN=581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93
2	116216764	106565:1	C	[2:116224311[C	53	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGT;MAPQ=60;MATEID=106565:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_71C;SPAN=7547;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:43:53.9:53.9,0,53.9:10:11:-53.93:53.93
2	116217058	106566:1	T	T[2:116220728[	42	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=106566:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_42C;SPAN=3670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:48:42.8:42.8,0,75.8:17:0:-42.62:43.2
2	116220728	106566:2	T	]2:116217058]T	42	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=106566:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_42C;SPAN=3670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:48:42.8:42.8,0,75.8:17:0:-42.62:43.2
2	116224311	106565:2	T	[2:116216764[T	53	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGT;MAPQ=60;MATEID=106565:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_116203501_116228501_71C;SPAN=7547;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:43:53.9:53.9,0,53.9:10:11:-53.93:53.93
2	117135487	106904:1	C	C[2:117135814[	30	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATACATCC;MAPQ=60;MATEID=106904:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_117134501_117159501_18C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:222:30.1:30.1,0,528.5:28:0:-30.03:56.82
2	117135814	106904:2	A	]2:117135487]A	30	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATACATCC;MAPQ=60;MATEID=106904:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_117134501_117159501_18C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:222:30.1:30.1,0,528.5:28:0:-30.03:56.82
2	117262101	106966:1	C	C[2:117263734[	22	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=106966:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_117257001_117282001_22C;SPAN=1633;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:38:22.4:22.4,0,71.9:10:0:-22.33:23.85
2	117263734	106966:2	C	]2:117262101]C	22	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=106966:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_117257001_117282001_22C;SPAN=1633;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:38:22.4:22.4,0,71.9:10:0:-22.33:23.85
2	117291982	106977:1	A	A[2:117294929[	17	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=106977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117281501_117306501_19C;SPAN=2947;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63
2	117294929	106977:2	A	]2:117291982]A	17	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=106977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117281501_117306501_19C;SPAN=2947;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63
2	117466294	107039:1	A	A[2:117469493[	68	PASS	EVDNC=ASSMB;HOMSEQ=CACA;MAPQ=60;MATEID=107039:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117453001_117478001_40C;SPAN=3199;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:28:2:68,0,2:23:0:-71.75:71.75
2	117469493	107039:2	C	]2:117466294]C	68	PASS	EVDNC=ASSMB;HOMSEQ=CACA;MAPQ=60;MATEID=107039:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117453001_117478001_40C;SPAN=3199;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:28:2:68,0,2:23:0:-71.75:71.75
2	118895753	107559:1	T	T[2:118901793[	46	PASS	EVDNC=ASSMB;HOMSEQ=CGGCACTGGCTT;MAPQ=60;MATEID=107559:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_118898501_118923501_3C;SPAN=6040;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21
2	118901793	107559:2	C	]2:118895753]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CGGCACTGGCTT;MAPQ=60;MATEID=107559:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_118898501_118923501_3C;SPAN=6040;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21
2	119525207	107732:1	G	]2:119525569]G	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=107732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119511001_119536001_108C;SPAN=362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:48:26.3:26.3,0,92.3:12:0:-26.12:28.31
2	119525569	107732:2	G	G[2:119525207[	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=107732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119511001_119536001_108C;SPAN=362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:48:26.3:26.3,0,92.3:12:0:-26.12:28.31
2	119659504	107766:1	C	]2:119660912]C	78	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=GGC;MAPQ=60;MATEID=107766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_112C;SPAN=1408;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:49:42.5:78.8,0,42.5:23:16:-79.16:79.16
2	119659624	107767:1	C	C[2:119660920[	39	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=107767:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_83C;SPAN=1296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:47:39.8:39.8,0,76.1:16:0:-39.61:40.32
2	119660912	107766:2	C	C[2:119659504[	78	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=GGC;MAPQ=60;MATEID=107766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_112C;SPAN=1408;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:49:42.5:78.8,0,42.5:23:16:-79.16:79.16
2	119660920	107767:2	G	]2:119659624]G	39	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=107767:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_119658001_119683001_83C;SPAN=1296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:47:39.8:39.8,0,76.1:16:0:-39.61:40.32
2	120540055	108111:1	T	]2:120753069]T	34	PASS	EVDNC=ASSMB;INSERTION=ATAAGGGTCA;MAPQ=60;MATEID=108111:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_120736001_120761001_31C;SPAN=213014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76
2	120753069	108111:2	T	T[2:120540055[	34	PASS	EVDNC=ASSMB;INSERTION=ATAAGGGTCA;MAPQ=60;MATEID=108111:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_120736001_120761001_31C;SPAN=213014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76
2	121040233	108217:1	G	G[2:121040824[	24	PASS	EVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=108217:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_121030001_121055001_47C;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
2	121040824	108217:2	C	]2:121040233]C	24	PASS	EVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=108217:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_121030001_121055001_47C;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
2	122607302	108621:1	A	A[2:122607801[	82	PASS	EVDNC=ASSMB;INSERTION=ATGGCAAATTAAATCCACCCAAGTCTATCA;MAPQ=60;MATEID=108621:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_135C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:29:4.8:82.5,4.8,0:26:0:-83.85:83.85
2	122607801	108621:2	A	]2:122607302]A	82	PASS	EVDNC=ASSMB;INSERTION=ATGGCAAATTAAATCCACCCAAGTCTATCA;MAPQ=60;MATEID=108621:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_135C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:29:4.8:82.5,4.8,0:26:0:-83.85:83.85
2	122612412	108622:1	A	]2:122613125]A	35	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=108622:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:122612412(-)-2:122613125(+)__2_122598001_122623001D;SPAN=713;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:39:35.3:35.3,0,61.7:0:14:-35.25:35.68
2	122612418	108624:1	G	G[2:122612766[	44	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=108624:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_26C;SPAN=348;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:31:31.1:44.3,0,31.1:16:0:-44.17:44.17
2	122612766	108624:2	T	]2:122612418]T	44	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=108624:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_26C;SPAN=348;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:31:31.1:44.3,0,31.1:16:0:-44.17:44.17
2	122613125	108622:2	A	A[2:122612412[	35	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=108622:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:122612412(-)-2:122613125(+)__2_122598001_122623001D;SPAN=713;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:39:35.3:35.3,0,61.7:0:14:-35.25:35.68
2	122719026	108679:1	G	[2:122724930[G	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=108679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122720501_122745501_3C;SPAN=5904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:19:5.7:62.7,5.7,0:12:16:-62.72:62.72
2	122724930	108679:2	T	[2:122719026[T	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=108679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122720501_122745501_3C;SPAN=5904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:19:5.7:62.7,5.7,0:12:16:-62.72:62.72
2	124294183	109318:1	T	[2:124295338[T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAGG;MAPQ=60;MATEID=109318:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_124288501_124313501_27C;SPAN=1155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:45:12.6:138.6,12.6,0:32:18:-138.6:138.6
2	124295338	109318:2	C	[2:124294183[C	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=GTAGG;MAPQ=60;MATEID=109318:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_124288501_124313501_27C;SPAN=1155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:45:12.6:138.6,12.6,0:32:18:-138.6:138.6
2	125008984	109599:1	C	C[2:125010671[	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=109599:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_2_124999001_125024001_30C;SPAN=1687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:38:50:12.5:111.5,0,12.5:38:0:-115.7:115.7
2	125008985	109602:1	A	]2:125010824]A	99	PASS	EVDNC=ASSMB;INSERTION=TCTATACTCACTACTACACTAT;MAPQ=60;MATEID=109602:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_124999001_125024001_27C;SPAN=1839;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:36:13.8:151.8,13.8,0:50:0:-151.8:151.8
2	125010671	109599:2	C	]2:125008984]C	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=109599:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_2_124999001_125024001_30C;SPAN=1687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:38:50:12.5:111.5,0,12.5:38:0:-115.7:115.7
2	125010824	109602:2	C	C[2:125008985[	99	PASS	EVDNC=ASSMB;INSERTION=TCTATACTCACTACTACACTAT;MAPQ=60;MATEID=109602:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_124999001_125024001_27C;SPAN=1839;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:36:13.8:151.8,13.8,0:50:0:-151.8:151.8
2	125013432	471947:1	A	[8:117667362[A	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAATAAAAT;MAPQ=60;MATEID=471947:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_117649001_117674001_5C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:26:8.4:92.4,8.4,0:27:7:-92.42:92.42
2	125276952	109688:1	A	]2:125284312]A	24	PASS	DISC_MAPQ=32;EVDNC=ASDIS;MAPQ=60;MATEID=109688:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_125268501_125293501_20C;SPAN=7360;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:42:24.5:24.5,0,80.6:9:7:-24.51:26.21
2	125284312	109688:2	T	T[2:125276952[	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=109688:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_125268501_125293501_20C;SPAN=7360;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:42:24.5:24.5,0,80.6:9:7:-24.51:26.21
2	125685674	109860:1	C	C[2:125694255[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAAC;MAPQ=60;MATEID=109860:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_125660501_125685501_31C;SPAN=8581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:0:11.7:128.7,11.7,0:30:17:-128.7:128.7
2	125694255	109860:2	T	]2:125685674]T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TAAC;MAPQ=60;MATEID=109860:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_125660501_125685501_31C;SPAN=8581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:0:11.7:128.7,11.7,0:30:17:-128.7:128.7
2	125852537	109909:1	G	G[2:125866487[	28	PASS	EVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=109909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_125856501_125881501_11C;SPAN=13950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
2	125866487	109909:2	T	]2:125852537]T	28	PASS	EVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=109909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_125856501_125881501_11C;SPAN=13950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
2	126315750	989664:1	G	]Un_KN707841v1_decoy:8992]G	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=989664:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_692_1_8992_0C;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:11:0:-33.01:33.01
2	126315751	110043:1	T	T[Un_KN707841v1_decoy:1[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=110043:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_126297501_126322501_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:23:10.1:46.4,0,10.1:16:0:-47.52:47.52
2	126917182	110225:1	C	C[2:126919697[	51	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=110225:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_126910001_126935001_60C;SPAN=2515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:27:15.5:51.8,0,15.5:18:0:-52.86:52.86
2	126919697	110225:2	T	]2:126917182]T	51	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=110225:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_126910001_126935001_60C;SPAN=2515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:27:15.5:51.8,0,15.5:18:0:-52.86:52.86
2	127188819	110351:1	A	]2:127316157]A	56	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=110351:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:127188819(-)-2:127316157(+)__2_127302001_127327001D;SPAN=127338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:21:2.4:56.1,2.4,0:0:18:-57:57
2	127316157	110351:2	T	T[2:127188819[	56	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=110351:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:127188819(-)-2:127316157(+)__2_127302001_127327001D;SPAN=127338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:21:2.4:56.1,2.4,0:0:18:-57:57
2	128082406	110651:1	C	C[3:185432358[	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTGTGTTTTTAGTAGAGACAGGGTTTCAC;MAPQ=60;MATEID=110651:2;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_2_128061501_128086501_81C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:13:6:66,6,0:18:9:-66.02:66.02
2	128792240	110897:1	C	]2:128792506]C	9	PASS	DISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=CACAGTGTCTCACACACACATCCACACA;MAPQ=60;MATEID=110897:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_2_128772001_128797001_8C;SPAN=266;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:48:9.8:9.8,0,108.8:5:2:-9.615:14.68
2	128792369	110900:1	C	C[2:128792446[	18	PASS	EVDNC=ASSMB;INSERTION=GCACAGTGTCTCA;MAPQ=33;MATEID=110900:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_2_128772001_128797001_44C;SPAN=77;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:10:0:-18.67:22.39
2	128792402	110902:1	A	A[2:128792446[	6	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CACACACATGCACACACA;MAPQ=45;MATEID=110902:2;MATENM=7;NM=5;NUMPARTS=3;REPSEQ=ACACACAC;SCTG=c_2_128772001_128797001_60C;SPAN=44;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:6:6,0,59.8:10:0:-5.664:9.489
2	128792446	110900:2	C	]2:128792369]C	18	PASS	EVDNC=ASSMB;INSERTION=GCACAGTGTCTCA;MAPQ=60;MATEID=110900:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_2_128772001_128797001_44C;SPAN=77;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:10:0:-18.67:22.39
2	128792446	110902:2	C	]2:128792402]C	6	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CACACACATGCACACACA;MAPQ=60;MATEID=110902:1;MATENM=5;NM=7;NUMPARTS=3;REPSEQ=ACACACAC;SCTG=c_2_128772001_128797001_60C;SPAN=44;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:6:6,0,59.8:10:0:-5.664:9.489
2	128792446	110905:1	C	]2:128792506]C	53	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACACACATGCACACACA;INSERTION=CAGTGTCTCTCACAAAGACCTCTCACACACACACATCCACACACATGCACAGTGTCACACACATCTCACACACGCACACAGTGTCA;MAPQ=60;MATEID=110905:2;MATENM=3;NM=7;NUMPARTS=3;SCTG=c_2_128772001_128797001_60C;SPAN=60;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:45:53.3:53.3,0,59.9:20:0:-53.37:53.39
2	128792506	110897:2	A	A[2:128792240[	9	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGTGTCTCACACACACATCCACACA;MAPQ=60;MATEID=110897:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_2_128772001_128797001_8C;SPAN=266;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:48:9.8:9.8,0,108.8:5:2:-9.615:14.68
2	128792506	110905:2	A	A[2:128792446[	53	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACACACATGCACACACA;INSERTION=CAGTGTCTCTCACAAAGACCTCTCACACACACACATCCACACACATGCACAGTGTCACACACATCTCACACACGCACACAGTGTCA;MAPQ=60;MATEID=110905:1;MATENM=7;NM=3;NUMPARTS=3;SCTG=c_2_128772001_128797001_60C;SPAN=60;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:45:53.3:53.3,0,59.9:20:0:-53.37:53.39
2	128927599	110968:1	A	[2:128928241[A	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=110968:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_128919001_128944001_113C;SPAN=642;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:49:39.2:39.2,0,82.1:13:6:-39.04:39.96
2	128928241	110968:2	T	[2:128927599[T	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=110968:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_128919001_128944001_113C;SPAN=642;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:49:39.2:39.2,0,82.1:13:6:-39.04:39.96
2	128946262	110984:1	G	G]2:128964689]	42	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=110984:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:128946262(+)-2:128964689(+)__2_128943501_128968501D;SPAN=18427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:37:42.5:42.5,0,49.1:0:16:-42.42:42.46
2	128964689	110984:2	T	T]2:128946262]	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=110984:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:128946262(+)-2:128964689(+)__2_128943501_128968501D;SPAN=18427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:37:42.5:42.5,0,49.1:0:16:-42.42:42.46
2	130185786	111787:1	T	[2:131488904[T	32	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=111787:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:130185786(-)-2:131488904(-)__2_131467001_131492001D;SPAN=1303118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
2	130197366	111380:1	A	A[2:130199831[	45	PASS	EVDNC=ASSMB;HOMSEQ=CACACCTGTA;MAPQ=60;MATEID=111380:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_130193001_130218001_124C;SPAN=2465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05
2	130199831	111380:2	C	]2:130197366]C	45	PASS	EVDNC=ASSMB;HOMSEQ=CACACCTGTA;MAPQ=60;MATEID=111380:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_130193001_130218001_124C;SPAN=2465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05
2	130208252	111774:1	G	G]2:131464145]	49	PASS	DISC_MAPQ=0;EVDNC=ASDIS;INSERTION=GACAT;MAPQ=33;MATEID=111774:2;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_2_131442501_131467501_12C;SPAN=1255893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:11:4:-48.04:48.04
2	130210907	511441:1	A	]9:111642641]A	42	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=511441:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_111622001_111647001_71C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:15:2:-43.34:43.34
2	131129004	111642:1	T	[2:131129734[T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=TT;MAPQ=60;MATEID=111642:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_131124001_131149001_16C;SPAN=730;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:45:12.6:138.6,12.6,0:44:19:-138.6:138.6
2	131129734	111642:2	C	[2:131129004[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TT;MAPQ=60;MATEID=111642:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_131124001_131149001_16C;SPAN=730;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:45:12.6:138.6,12.6,0:44:19:-138.6:138.6
2	131464145	111774:2	A	A]2:130208252]	49	PASS	DISC_MAPQ=14;EVDNC=ASDIS;INSERTION=GACAT;MAPQ=40;MATEID=111774:1;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_2_131442501_131467501_12C;SPAN=1255893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:11:4:-48.04:48.04
2	131488904	111787:2	A	[2:130185786[A	32	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=111787:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:130185786(-)-2:131488904(-)__2_131467001_131492001D;SPAN=1303118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
2	131777353	112018:1	A	[2:131821297[A	52	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=112018:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:131777353(-)-2:131821297(-)__2_131810001_131835001D;SPAN=43944;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:0:17:-52.81:52.81
2	131777354	111989:1	A	[2:131821781[A	99	PASS	DISC_MAPQ=27;EVDNC=ASDIS;HOMSEQ=GCT;MAPQ=60;MATEID=111989:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_2_131761001_131786001_0C;SPAN=44427;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:9:12.6:138.6,12.6,0:35:20:-138.6:138.6
2	131821297	112018:2	G	[2:131777353[G	52	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=112018:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:131777353(-)-2:131821297(-)__2_131810001_131835001D;SPAN=43944;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:0:17:-52.81:52.81
2	131821781	111989:2	G	[2:131777354[G	99	PASS	DISC_MAPQ=25;EVDNC=ASDIS;HOMSEQ=GCT;MAPQ=60;MATEID=111989:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_2_131761001_131786001_0C;SPAN=44427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:9:12.6:138.6,12.6,0:35:20:-138.6:138.6
2	132243814	112281:1	T	[14:18223617[T	95	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=112281:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132243814(-)-14:18223617(-)__2_132226501_132251501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:29:8.7:95.7,8.7,0:0:32:-95.72:95.72
2	132270852	875478:1	G	G[20:30502676[	59	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=875478:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132270852(+)-20:30502676(-)__20_30502501_30527501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:0:18:-58.15:58.15
2	132544930	112605:1	C	]2:132883250]C	15	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CATG;MAPQ=60;MATEID=112605:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132863501_132888501_16C;SPAN=338320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:4:4:-15.03:15.24
2	132883250	112605:2	G	G[2:132544930[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CATG;MAPQ=60;MATEID=112605:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132863501_132888501_16C;SPAN=338320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:4:4:-15.03:15.24
2	133005391	112633:1	C	C[2:133006981[	20	PASS	EVDNC=ASSMB;INSERTION=AAACAACAAAAAATTATT;MAPQ=60;MATEID=112633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132986001_133011001_15C;SPAN=1590;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63
2	133006981	112633:2	T	]2:133005391]T	20	PASS	EVDNC=ASSMB;INSERTION=AAACAACAAAAAATTATT;MAPQ=60;MATEID=112633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132986001_133011001_15C;SPAN=1590;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63
2	133212138	112700:1	G	]2:133287509]G	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=112700:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_133280001_133305001_15C;SPAN=75371;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:7:2:-19.38:19.89
2	133287509	112700:2	A	A[2:133212138[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=112700:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_133280001_133305001_15C;SPAN=75371;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:7:2:-19.38:19.89
2	133702708	112810:1	T	T[2:133703001[	95	PASS	EVDNC=ASSMB;HOMSEQ=CTCGTCTCTTTTTCT;MAPQ=60;MATEID=112810:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_133696501_133721501_7C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:18:8.7:95.7,8.7,0:32:0:-95.72:95.72
2	133703001	112810:2	C	]2:133702708]C	95	PASS	EVDNC=ASSMB;HOMSEQ=CTCGTCTCTTTTTCT;MAPQ=60;MATEID=112810:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_133696501_133721501_7C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:18:8.7:95.7,8.7,0:32:0:-95.72:95.72
2	133786720	112839:1	A	A[2:133787036[	37	PASS	EVDNC=ASSMB;HOMSEQ=AAATAATTGATGATTTA;MAPQ=60;MATEID=112839:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_133770001_133795001_54C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:55:37.4:37.4,0,100.1:16:0:-37.36:38.98
2	133787036	112839:2	A	]2:133786720]A	37	PASS	EVDNC=ASSMB;HOMSEQ=AAATAATTGATGATTTA;MAPQ=60;MATEID=112839:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_133770001_133795001_54C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:55:37.4:37.4,0,100.1:16:0:-37.36:38.98
2	134209146	112961:1	T	T[2:134212560[	29	PASS	EVDNC=ASSMB;HOMSEQ=AGAACTGGCTTATTTTT;MAPQ=60;MATEID=112961:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134211001_134236001_46C;SPAN=3414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08
2	134212560	112961:2	A	]2:134209146]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AGAACTGGCTTATTTTT;MAPQ=60;MATEID=112961:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134211001_134236001_46C;SPAN=3414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08
2	134524328	113044:1	G	G[2:134525016[	53	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=113044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134505001_134530001_4C;SPAN=688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:34:30.2:53.3,0,30.2:19:0:-53.43:53.43
2	134525016	113044:2	G	]2:134524328]G	53	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=113044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134505001_134530001_4C;SPAN=688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:34:30.2:53.3,0,30.2:19:0:-53.43:53.43
2	134921604	113147:1	T	T[2:134923614[	13	PASS	EVDNC=ASSMB;HOMSEQ=GCCT;MAPQ=60;MATEID=113147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134921501_134946501_50C;SPAN=2010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:46:13.7:13.7,0,99.5:8:0:-13.48:17.45
2	134923614	113147:2	G	]2:134921604]G	13	PASS	EVDNC=ASSMB;HOMSEQ=GCCT;MAPQ=60;MATEID=113147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134921501_134946501_50C;SPAN=2010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:46:13.7:13.7,0,99.5:8:0:-13.48:17.45
2	137225736	113732:1	T	T[2:137226890[	48	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=113732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_137224501_137249501_17C;SPAN=1154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:27:18.8:48.5,0,18.8:17:0:-49.21:49.21
2	137226890	113732:2	A	]2:137225736]A	48	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=113732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_137224501_137249501_17C;SPAN=1154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:27:18.8:48.5,0,18.8:17:0:-49.21:49.21
2	138199265	114138:1	A	]2:138199333]A	33	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=114138:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_138180001_138205001_40C;SPAN=68;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:35:33.2:33.2,0,53:13:0:-33.08:33.38
2	138199333	114138:2	A	A[2:138199265[	33	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=114138:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_138180001_138205001_40C;SPAN=68;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:35:33.2:33.2,0,53:13:0:-33.08:33.38
2	140883094	115249:1	C	]2:140942060]C	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAGAAT;MAPQ=60;MATEID=115249:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_140924001_140949001_4C;SPAN=58966;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:8:12:-47.02:47.02
2	140942060	115249:2	A	A[2:140883094[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAGAAT;MAPQ=60;MATEID=115249:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_140924001_140949001_4C;SPAN=58966;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:8:12:-47.02:47.02
2	141095450	115326:2	A	A]1:118858672]	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=115326:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:118858672(+)-2:141095450(+)__2_141071001_141096001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91
2	141141086	115406:1	T	T[2:141224396[	39	PASS	EVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=115406:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_141218001_141243001_34C;SPAN=83310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
2	141211129	115452:1	A	A[2:141354574[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=115452:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_141340501_141365501_3C;SPAN=143445;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:5:4:-21.93:21.93
2	141224396	115406:2	A	]2:141141086]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=115406:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_141218001_141243001_34C;SPAN=83310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
2	141354574	115452:2	A	]2:141211129]A	22	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=115452:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_141340501_141365501_3C;SPAN=143445;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:5:4:-21.93:21.93
2	142677053	115964:1	T	T[2:142677375[	48	PASS	EVDNC=ASSMB;HOMSEQ=CAAAGCTTTCATTTTTT;MAPQ=60;MATEID=115964:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_142663501_142688501_29C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:62:48.8:48.8,0,104.9:20:0:-48.59:49.82
2	142677375	115964:2	C	]2:142677053]C	48	PASS	EVDNC=ASSMB;HOMSEQ=CAAAGCTTTCATTTTTT;MAPQ=60;MATEID=115964:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_142663501_142688501_29C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:62:48.8:48.8,0,104.9:20:0:-48.59:49.82
2	143253785	835731:1	A	A]18:71950157]	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=835731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:143253785(+)-18:71950157(+)__18_71932001_71957001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:6:3.3:36.3,3.3,0:0:12:-36.31:36.31
2	144160369	116411:1	A	]2:144160541]A	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=116411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_144158001_144183001_13C;SPAN=172;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:38:19.1:19.1,0,75.2:9:0:-19.03:20.99
2	144160541	116411:2	C	C[2:144160369[	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=116411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_144158001_144183001_13C;SPAN=172;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:38:19.1:19.1,0,75.2:9:0:-19.03:20.99
2	144833448	116606:1	T	T[2:144835123[	17	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=116606:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:144833448(+)-2:144835123(-)__2_144819501_144844501D;SPAN=1675;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63
2	144835123	116606:2	G	]2:144833448]G	17	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=116606:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:144833448(+)-2:144835123(-)__2_144819501_144844501D;SPAN=1675;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63
2	145668177	116850:1	A	]2:145716276]A	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=116850:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_145701501_145726501_17C;SPAN=48099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:23:23.3:33.2,0,23.3:10:9:-33.21:33.21
2	145716276	116850:2	T	T[2:145668177[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=116850:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_145701501_145726501_17C;SPAN=48099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:23:23.3:33.2,0,23.3:10:9:-33.21:33.21
2	146105053	117026:1	T	T[2:146119295[	35	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=117026:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_146118001_146143001_26C;SPAN=14242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
2	146119295	117026:2	G	]2:146105053]G	35	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=117026:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_146118001_146143001_26C;SPAN=14242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
2	148379770	117653:1	A	]2:148427543]A	31	PASS	DISC_MAPQ=48;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=117653:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_148372001_148397001_19C;SPAN=47773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:11:8:-31.74:31.78
2	148427543	117653:2	A	A[2:148379770[	31	PASS	DISC_MAPQ=36;EVDNC=ASDIS;INSERTION=T;MAPQ=47;MATEID=117653:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_148372001_148397001_19C;SPAN=47773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:11:8:-31.74:31.78
2	150174624	118294:1	T	T[2:150181733[	99	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=118294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_150160501_150185501_19C;SPAN=7109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:39:4.2:105.6,4.2,0:34:0:-108.4:108.4
2	150181733	118294:2	G	]2:150174624]G	99	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=118294:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_150160501_150185501_19C;SPAN=7109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:39:4.2:105.6,4.2,0:34:0:-108.4:108.4
2	151184691	118701:1	T	T[2:151184979[	44	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=118701:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_151165001_151190001_57C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:55:44:44,0,93.5:18:0:-43.96:44.97
2	151184979	118701:2	T	]2:151184691]T	44	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=118701:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_151165001_151190001_57C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:55:44:44,0,93.5:18:0:-43.96:44.97
2	154039258	119963:1	G	G[2:154042666[	65	PASS	EVDNC=ASSMB;INSERTION=GATT;MAPQ=60;MATEID=119963:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_154031501_154056501_62C;SPAN=3408;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:61:65.6:65.6,0,85.4:25:0:-65.38:65.57
2	154042666	119963:2	A	]2:154039258]A	65	PASS	EVDNC=ASSMB;INSERTION=GATT;MAPQ=60;MATEID=119963:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_154031501_154056501_62C;SPAN=3408;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:61:65.6:65.6,0,85.4:25:0:-65.38:65.57
2	154150374	125028:1	T	[2:166690583[T	99	PASS	DISC_MAPQ=19;EVDNC=ASDIS;INSERTION=A;MAPQ=47;MATEID=125028:2;MATENM=10;NM=0;NUMPARTS=2;SCTG=c_2_166673501_166698501_5C;SPAN=12540209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:69:21:19.2:211.2,19.2,0:64:17:-211.3:211.3
2	155019728	120494:1	A	]2:155343836]A	34	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=120494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155330001_155355001_14C;SPAN=324108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:9:10:-34.2:34.27
2	155034681	120386:1	T	T[2:155034983[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGCTGTTACTTTTT;MAPQ=60;MATEID=120386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155011501_155036501_107C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:59:9.8:138.5,0,9.8:41:12:-145.2:145.2
2	155034983	120386:2	C	]2:155034681]C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGCTGTTACTTTTT;MAPQ=60;MATEID=120386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155011501_155036501_107C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:59:9.8:138.5,0,9.8:41:12:-145.2:145.2
2	155343836	120494:2	G	G[2:155019728[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=120494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155330001_155355001_14C;SPAN=324108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:9:10:-34.2:34.27
2	157171629	940773:1	A	]X:105542844]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAT;MAPQ=60;MATEID=940773:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_105521501_105546501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
2	157576837	121345:1	T	T[2:157577155[	99	PASS	EVDNC=ASSMB;HOMSEQ=TGAAATTTTCTT;MAPQ=60;MATEID=121345:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_157559501_157584501_73C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:44:12.3:135.3,12.3,0:43:0:-135.3:135.3
2	157577155	121345:2	T	]2:157576837]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TGAAATTTTCTT;MAPQ=60;MATEID=121345:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_157559501_157584501_73C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:44:12.3:135.3,12.3,0:43:0:-135.3:135.3
2	158805484	121844:1	C	C[2:158806361[	60	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=121844:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_158784501_158809501_18C;SPAN=877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:55:60.5:60.5,0,77:23:0:-60.46:60.59
2	158806361	121844:2	G	]2:158805484]G	60	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=121844:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_158784501_158809501_18C;SPAN=877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:55:60.5:60.5,0,77:23:0:-60.46:60.59
2	159292615	122074:1	C	C[2:159295138[	99	PASS	EVDNC=ASSMB;HOMSEQ=TAGAATTTC;MAPQ=60;MATEID=122074:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_159274501_159299501_119C;SPAN=2523;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114
2	159295138	122074:2	T	]2:159292615]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TAGAATTTC;MAPQ=60;MATEID=122074:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_159274501_159299501_119C;SPAN=2523;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114
2	161095746	122996:2	C	C]1:32790315]	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=122996:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:32790315(+)-2:161095746(+)__2_161087501_161112501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
2	161386035	123118:1	A	A[2:161388256[	16	PASS	EVDNC=ASSMB;HOMSEQ=AAAA;MAPQ=60;MATEID=123118:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_161381501_161406501_28C;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77
2	161388256	123118:2	A	]2:161386035]A	16	PASS	EVDNC=ASSMB;HOMSEQ=AAAA;MAPQ=60;MATEID=123118:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_161381501_161406501_28C;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77
2	161475875	123145:1	C	C[2:161477530[	99	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=123145:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:161475875(+)-2:161477530(-)__2_161455001_161480001D;SPAN=1655;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:77:15:21.3:234.3,21.3,0:0:77:-234.4:234.4
2	161477530	123145:2	G	]2:161475875]G	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=123145:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:161475875(+)-2:161477530(-)__2_161455001_161480001D;SPAN=1655;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:77:15:21.3:234.3,21.3,0:0:77:-234.4:234.4
2	162753054	123497:1	C	C]9:24546560]	17	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=123497:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:162753054(+)-9:24546560(+)__2_162729001_162754001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63
2	165158185	124267:1	G	G[2:165160235[	67	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=124267:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_165154501_165179501_143C;SPAN=2050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07
2	165160235	124267:2	T	]2:165158185]T	67	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=124267:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_165154501_165179501_143C;SPAN=2050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07
2	165411013	124385:1	C	C[2:165411322[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCTCCAGACCC;MAPQ=60;MATEID=124385:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_165399501_165424501_116C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7
2	165411322	124385:2	A	]2:165411013]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCTCCAGACCC;MAPQ=60;MATEID=124385:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_165399501_165424501_116C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7
2	166689462	125038:1	A	A[2:166690576[	82	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=125038:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:166689462(+)-2:166690576(-)__2_166673501_166698501D;SPAN=1114;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:16:7.5:82.5,7.5,0:0:27:-82.52:82.52
2	166690576	125038:2	T	]2:166689462]T	82	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=125038:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:166689462(+)-2:166690576(-)__2_166673501_166698501D;SPAN=1114;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:16:7.5:82.5,7.5,0:0:27:-82.52:82.52
2	166690583	125028:2	A	[2:154150374[A	99	PASS	DISC_MAPQ=42;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=125028:1;MATENM=0;NM=10;NUMPARTS=2;SCTG=c_2_166673501_166698501_5C;SPAN=12540209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:69:21:19.2:211.2,19.2,0:64:17:-211.3:211.3
2	168039311	125455:1	G	G[2:168039617[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAGCAGATCAG;MAPQ=60;MATEID=125455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_168021001_168046001_91C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:39:10.8:118.8,10.8,0:38:0:-118.8:118.8
2	168039617	125455:2	A	]2:168039311]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAGCAGATCAG;MAPQ=60;MATEID=125455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_168021001_168046001_91C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:39:10.8:118.8,10.8,0:38:0:-118.8:118.8
2	169004595	135835:1	C	C[2:194709245[	27	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=135835:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_194701501_194726501_15C;SPAN=25704650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
2	169248623	125952:1	A	A[2:169254653[	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAACAGCAATGTTGA;MAPQ=60;MATEID=125952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_169246001_169271001_139C;SPAN=6030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:37:39.2:52.4,0,39.2:19:0:-52.39:52.39
2	169254653	125952:2	A	]2:169248623]A	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAACAGCAATGTTGA;MAPQ=60;MATEID=125952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_169246001_169271001_139C;SPAN=6030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:37:39.2:52.4,0,39.2:19:0:-52.39:52.39
2	169785008	126220:1	C	C[2:169787442[	82	PASS	EVDNC=ASSMB;HOMSEQ=TCATTATTTTC;MAPQ=60;MATEID=126220:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_169785001_169810001_42C;SPAN=2434;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:25:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	169787442	126220:2	T	]2:169785008]T	82	PASS	EVDNC=ASSMB;HOMSEQ=TCATTATTTTC;MAPQ=60;MATEID=126220:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_169785001_169810001_42C;SPAN=2434;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:25:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	171438928	126956:1	C	C[12:104125233[	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TCAGTC;MAPQ=60;MATEID=126956:2;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_2_171426501_171451501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:30:12.9:141.9,12.9,0:46:9:-141.9:141.9
2	171976067	127221:1	A	[Un_JTFH01001495v1_decoy:1[A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=127221:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_171965501_171990501_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:27:12.6:138.6,12.6,0:45:0:-138.6:138.6
2	171976069	987138:1	C	C[Un_KN707623v1_decoy:1[	75	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=987138:2;MATENM=2;NM=0;NUMPARTS=7;REPSEQ=CGACGA;SCTG=c_474_1_3784_1C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:10:8.6:75.4,8.6,0:32:0:-75.43:75.43
2	172041326	127279:1	G	G[2:172045508[	59	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAAATTAGCCGGGCGTGGTGG;MAPQ=60;MATEID=127279:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_172039001_172064001_63C;SPAN=4182;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:12:11:-59.41:59.41
2	172045508	127279:2	A	]2:172041326]A	59	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AAAATTAGCCGGGCGTGGTGG;MAPQ=60;MATEID=127279:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_172039001_172064001_63C;SPAN=4182;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:12:11:-59.41:59.41
2	172139606	127333:1	T	T[2:172142746[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=127333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:172139606(+)-2:172142746(-)__2_172137001_172162001D;SPAN=3140;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23
2	172142746	127333:2	A	]2:172139606]A	21	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=127333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:172139606(+)-2:172142746(-)__2_172137001_172162001D;SPAN=3140;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23
2	173287016	127742:1	T	T[2:173287318[	51	PASS	EVDNC=ASSMB;HOMSEQ=CTCTTTAACTTTTT;MAPQ=60;MATEID=127742:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_2_173264001_173289001_76C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
2	173287318	127742:2	C	]2:173287016]C	51	PASS	EVDNC=ASSMB;HOMSEQ=CTCTTTAACTTTTT;MAPQ=60;MATEID=127742:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_2_173264001_173289001_76C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
2	176400917	128762:1	T	T[2:176407313[	99	PASS	EVDNC=ASSMB;HOMSEQ=TATT;MAPQ=60;MATEID=128762:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_176400001_176425001_18C;SPAN=6396;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:22:9.6:105.6,9.6,0:35:0:-105.6:105.6
2	176407313	128762:2	T	]2:176400917]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TATT;MAPQ=60;MATEID=128762:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_176400001_176425001_18C;SPAN=6396;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:22:9.6:105.6,9.6,0:35:0:-105.6:105.6
2	177252359	129060:1	A	A[2:177259301[	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=129060:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:177252359(+)-2:177259301(-)__2_177257501_177282501D;SPAN=6942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
2	177259301	129060:2	C	]2:177252359]C	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=129060:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:177252359(+)-2:177259301(-)__2_177257501_177282501D;SPAN=6942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
2	177422909	129133:1	C	C[2:177423334[	99	PASS	EVDNC=ASSMB;INSERTION=AGCCAAACAG;MAPQ=60;MATEID=129133:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_177404501_177429501_28C;SPAN=425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:38:7.2:108.9,7.2,0:34:0:-109.6:109.6
2	177423334	129133:2	T	]2:177422909]T	99	PASS	EVDNC=ASSMB;INSERTION=AGCCAAACAG;MAPQ=60;MATEID=129133:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_177404501_177429501_28C;SPAN=425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:38:7.2:108.9,7.2,0:34:0:-109.6:109.6
2	178826569	129781:1	T	]2:178874593]T	29	PASS	EVDNC=ASSMB;INSERTION=AGTTGTTTCCAACTGCTTTGCAG;MAPQ=60;MATEID=129781:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178874501_178899501_47C;SPAN=48024;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
2	178838895	129763:1	A	A[2:178839864[	92	PASS	EVDNC=ASSMB;INSERTION=TGAAAGTA;MAPQ=60;MATEID=129763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178825501_178850501_1C;SPAN=969;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:37:0.3:92.4,0.3,0:31:0:-97.36:97.36
2	178839864	129763:2	C	]2:178838895]C	92	PASS	EVDNC=ASSMB;INSERTION=TGAAAGTA;MAPQ=60;MATEID=129763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178825501_178850501_1C;SPAN=969;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:37:0.3:92.4,0.3,0:31:0:-97.36:97.36
2	178874593	129781:2	C	C[2:178826569[	29	PASS	EVDNC=ASSMB;INSERTION=AGTTGTTTCCAACTGCTTTGCAG;MAPQ=60;MATEID=129781:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178874501_178899501_47C;SPAN=48024;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
2	181061110	130693:1	T	T[2:181061423[	85	PASS	EVDNC=ASSMB;HOMSEQ=GACCACTTCT;MAPQ=60;MATEID=130693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_181055001_181080001_61C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82
2	181061423	130693:2	G	]2:181061110]G	85	PASS	EVDNC=ASSMB;HOMSEQ=GACCACTTCT;MAPQ=60;MATEID=130693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_181055001_181080001_61C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82
2	182289080	131078:1	C	]2:182289280]C	26	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=131078:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_182280001_182305001_6C;SPAN=200;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:58:26.6:26.6,0,119:13:0:-26.61:29.96
2	182289280	131078:2	T	T[2:182289080[	26	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=131078:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_182280001_182305001_6C;SPAN=200;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:58:26.6:26.6,0,119:13:0:-26.61:29.96
2	183929705	131661:1	A	A[2:183939304[	99	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=131661:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_183921501_183946501_80C;SPAN=9599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:37:3.6:99,3.6,0:32:0:-101.7:101.7
2	183939304	131661:2	G	]2:183929705]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=131661:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_183921501_183946501_80C;SPAN=9599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:37:3.6:99,3.6,0:32:0:-101.7:101.7
2	186472273	132612:1	T	T[2:186473340[	31	PASS	EVDNC=ASSMB;INSERTION=CCCCATGGTCTCCCTCTCCCTCTTTCCATGGTCTCCC;MAPQ=60;MATEID=132612:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_186469501_186494501_55C;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
2	186473340	132612:2	G	]2:186472273]G	31	PASS	EVDNC=ASSMB;INSERTION=CCCCATGGTCTCCCTCTCCCTCTTTCCATGGTCTCCC;MAPQ=60;MATEID=132612:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_186469501_186494501_55C;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
2	187785173	133134:1	G	]2:194591082]G	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGC;MAPQ=60;MATEID=133134:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_187768001_187793001_76C;SPAN=6805909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:20:8.4:92.4,8.4,0:26:6:-92.42:92.42
2	189753180	133859:1	C	C[2:189765979[	85	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=133859:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_189752501_189777501_15C;SPAN=12799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:37:6.2:85.4,0,6.2:29:0:-89.11:89.11
2	189765979	133859:2	A	]2:189753180]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=39;MATEID=133859:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_189752501_189777501_15C;SPAN=12799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:37:6.2:85.4,0,6.2:29:0:-89.11:89.11
2	191154732	134413:1	C	]2:191154907]C	41	PASS	EVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=134413:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191149001_191174001_96C;SPAN=175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:76:41.6:41.6,0,147.2:19:0:-41.36:44.82
2	191154907	134413:2	T	T[2:191154732[	41	PASS	EVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=134413:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191149001_191174001_96C;SPAN=175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:76:41.6:41.6,0,147.2:19:0:-41.36:44.82
2	191834730	134685:1	T	]2:191863633]T	75	PASS	EVDNC=ASSMB;INSERTION=TAAT;MAPQ=60;MATEID=134685:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191859501_191884501_27C;SPAN=28903;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:36:13.1:75.8,0,13.1:26:0:-78.01:78.01
2	191863633	134685:2	T	T[2:191834730[	75	PASS	EVDNC=ASSMB;INSERTION=TAAT;MAPQ=60;MATEID=134685:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191859501_191884501_27C;SPAN=28903;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:36:13.1:75.8,0,13.1:26:0:-78.01:78.01
2	193213246	135182:1	C	[11:25101793[C	85	PASS	DISC_MAPQ=3;EVDNC=ASDIS;MAPQ=11;MATEID=135182:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_193207001_193232001_9C;SPAN=-1;SUBN=10;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:25:7:-85.82:85.82
2	193680440	702567:1	T	T[14:64980572[	44	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702567:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:193680440(+)-14:64980572(-)__14_64974001_64999001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:31:31.1:44.3,0,31.1:0:16:-44.17:44.17
2	193824778	135427:1	G	G[2:193834042[	99	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=135427:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_2_193819501_193844501_3C;SPAN=9264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:21:12.9:141.9,12.9,0:47:0:-141.9:141.9
2	193834042	135427:2	G	]2:193824778]G	99	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=135427:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_2_193819501_193844501_3C;SPAN=9264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:21:12.9:141.9,12.9,0:47:0:-141.9:141.9
2	194591082	133134:2	C	C[2:187785173[	92	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGC;MAPQ=60;MATEID=133134:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_187768001_187793001_76C;SPAN=6805909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:20:8.4:92.4,8.4,0:26:6:-92.42:92.42
2	194709245	135835:2	C	]2:169004595]C	27	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=135835:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_194701501_194726501_15C;SPAN=25704650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
2	195871703	136348:1	A	A[2:195871967[	42	PASS	EVDNC=ASSMB;HOMSEQ=AAACTACTTAAGGGAA;MAPQ=60;MATEID=136348:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_195853001_195878001_3C;SPAN=264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:36:42.8:42.8,0,46.1:16:0:-42.7:42.71
2	195871967	136348:2	A	]2:195871703]A	42	PASS	EVDNC=ASSMB;HOMSEQ=AAACTACTTAAGGGAA;MAPQ=60;MATEID=136348:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_195853001_195878001_3C;SPAN=264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:36:42.8:42.8,0,46.1:16:0:-42.7:42.71
2	198602574	13050:2	T	T]1:53954555]	16	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=13050:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_99C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:94:16.7:16.7,0,218:11:5:-16.49:26.94
2	200330213	137704:1	C	C[2:200330215[	99	PASS	EVDNC=ASSMB;INSERTION=TGTTATTGTTAATCAGTATTGGTATTTGAATAGGGATATCCAAAGTATTTGCTGAACAGAAAGCATGTTGTTTTAGGTCCATATTTTCCCTGAAAGTATTTTTATTATTATCATTTTTAAAATTTTTCCCTCCAATGGTCTTATTTAAATTAATTTACTTAACAAGCCGTATATTCCTTGTGG;MAPQ=60;MATEID=137704:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_200312001_200337001_67C;SPAN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:46:15:165,15,0:54:0:-165:165
2	200330215	137704:2	A	]2:200330213]A	99	PASS	EVDNC=ASSMB;INSERTION=TGTTATTGTTAATCAGTATTGGTATTTGAATAGGGATATCCAAAGTATTTGCTGAACAGAAAGCATGTTGTTTTAGGTCCATATTTTCCCTGAAAGTATTTTTATTATTATCATTTTTAAAATTTTTCCCTCCAATGGTCTTATTTAAATTAATTTACTTAACAAGCCGTATATTCCTTGTGG;MAPQ=60;MATEID=137704:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_200312001_200337001_67C;SPAN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:46:15:165,15,0:54:0:-165:165
2	200892641	137952:1	T	]2:200999744]T	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=137952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_200998001_201023001_37C;SPAN=107103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:14:6.3:69.3,6.3,0:19:16:-69.32:69.32
2	200999744	137952:2	T	T[2:200892641[	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=137952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_200998001_201023001_37C;SPAN=107103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:14:6.3:69.3,6.3,0:19:16:-69.32:69.32
2	201224090	138022:1	G	G]2:201224836]	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=138022:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:201224090(+)-2:201224836(+)__2_201218501_201243501D;SPAN=746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59
2	201224836	138022:2	G	G]2:201224090]	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=138022:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:201224090(+)-2:201224836(+)__2_201218501_201243501D;SPAN=746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59
2	204726519	138791:1	A	A[2:204836612[	33	PASS	EVDNC=ASSMB;INSERTION=TCACCTT;MAPQ=60;MATEID=138791:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_204820001_204845001_17C;SPAN=110093;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:7:3:33,3,0:11:0:-33.01:33.01
2	204836612	138791:2	G	]2:204726519]G	33	PASS	EVDNC=ASSMB;INSERTION=TCACCTT;MAPQ=60;MATEID=138791:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_204820001_204845001_17C;SPAN=110093;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:7:3:33,3,0:11:0:-33.01:33.01
2	207609829	139331:1	G	G[2:207612088[	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=139331:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:207609829(+)-2:207612088(-)__2_207588501_207613501D;SPAN=2259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
2	207612088	139331:2	T	]2:207609829]T	29	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=139331:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:207609829(+)-2:207612088(-)__2_207588501_207613501D;SPAN=2259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
2	208098598	139470:1	T	]Un_KN707702v1_decoy:6466]T	82	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AAAATTTTTTGGGTACATAGTAGGTATATATATTTAA;INSERTION=A;MAPQ=60;MATEID=139470:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_2_208078501_208103501_28C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52
2	208587006	139691:1	T	T[2:208587320[	10	PASS	EVDNC=ASSMB;HOMSEQ=GTTTGTTGATTTTT;MAPQ=60;MATEID=139691:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_208568501_208593501_24C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:22:10.4:10.4,0,43.4:5:0:-10.32:11.56
2	208587320	139691:2	G	]2:208587006]G	10	PASS	EVDNC=ASSMB;HOMSEQ=GTTTGTTGATTTTT;MAPQ=60;MATEID=139691:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_208568501_208593501_24C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:22:10.4:10.4,0,43.4:5:0:-10.32:11.56
2	212191435	140743:1	A	]2:212191551]A	53	PASS	EVDNC=ASSMB;INSERTION=ACATGTTATACCTGTTATATATA;MAPQ=60;MATEID=140743:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_212170001_212195001_87C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66
2	212191551	140743:2	T	T[2:212191435[	53	PASS	EVDNC=ASSMB;INSERTION=ACATGTTATACCTGTTATATATA;MAPQ=60;MATEID=140743:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_212170001_212195001_87C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66
2	212709962	140980:1	C	C[2:212710254[	69	PASS	EVDNC=ASSMB;HOMSEQ=AAAATAGCAAGGCCC;MAPQ=60;MATEID=140980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_212709001_212734001_32C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	212710254	140980:2	A	]2:212709962]A	69	PASS	EVDNC=ASSMB;HOMSEQ=AAAATAGCAAGGCCC;MAPQ=60;MATEID=140980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_212709001_212734001_32C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	213306364	141169:1	T	T[Un_KN707739v1_decoy:1[	75	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=141169:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_213297001_213322001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:11:6.9:75.9,6.9,0:25:0:-75.92:75.92
2	213642624	141246:1	A	A[2:213642846[	9	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGAGACTGGTCTA;MAPQ=60;MATEID=141246:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_213640001_213665001_27C;SPAN=222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:13:9.5:9.5,0,22.7:4:0:-9.55:9.863
2	213642846	141246:2	A	]2:213642624]A	9	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGAGACTGGTCTA;MAPQ=60;MATEID=141246:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_213640001_213665001_27C;SPAN=222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:13:9.5:9.5,0,22.7:4:0:-9.55:9.863
2	214647889	141837:1	A	]2:215113891]A	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATT;MAPQ=60;MATEID=141837:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_215110001_215135001_11C;SPAN=466002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:10:7:-39.01:39.01
2	215113891	141837:2	T	T[2:214647889[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATT;MAPQ=60;MATEID=141837:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_215110001_215135001_11C;SPAN=466002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:10:7:-39.01:39.01
2	215919785	142169:1	G	]2:215919902]G	30	PASS	EVDNC=ASSMB;INSERTION=TCTTTCCTGCAAGGGCA;MAPQ=60;MATEID=142169:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_215918501_215943501_67C;SPAN=117;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15
2	215919902	142169:2	T	T[2:215919785[	30	PASS	EVDNC=ASSMB;INSERTION=TCTTTCCTGCAAGGGCA;MAPQ=60;MATEID=142169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_215918501_215943501_67C;SPAN=117;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15
2	216225272	142263:1	T	T[2:216227775[	66	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=142263:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:216225272(+)-2:216227775(-)__2_216212501_216237501D;SPAN=2503;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:10:6:66,6,0:0:22:-66.02:66.02
2	216227775	142263:2	C	]2:216225272]C	66	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=142263:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:216225272(+)-2:216227775(-)__2_216212501_216237501D;SPAN=2503;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:10:6:66,6,0:0:22:-66.02:66.02
2	216228074	142267:1	T	T[2:216228389[	69	PASS	EVDNC=ASSMB;HOMSEQ=TCTTTCTTTCTTTCT;MAPQ=60;MATEID=142267:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_216212501_216237501_20C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	216228389	142267:2	T	]2:216228074]T	69	PASS	EVDNC=ASSMB;HOMSEQ=TCTTTCTTTCTTTCT;MAPQ=60;MATEID=142267:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_216212501_216237501_20C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	217091173	142474:1	G	G[2:217092544[	69	PASS	EVDNC=ASSMB;HOMSEQ=GGTGG;MAPQ=60;MATEID=142474:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_217070001_217095001_2C;SPAN=1371;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	217092544	142474:2	G	]2:217091173]G	69	PASS	EVDNC=ASSMB;HOMSEQ=GGTGG;MAPQ=60;MATEID=142474:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_217070001_217095001_2C;SPAN=1371;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32
2	219367977	143177:1	C	C[2:219368443[	89	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCAAGATCACACCATTGCACTCCAGCCTGGGTGACAGAGC;MAPQ=60;MATEID=143177:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_219348501_219373501_5C;SPAN=466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:23:8.1:89.1,8.1,0:19:16:-89.12:89.12
2	219368443	143177:2	C	]2:219367977]C	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGATCACACCATTGCACTCCAGCCTGGGTGACAGAGC;MAPQ=60;MATEID=143177:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_219348501_219373501_5C;SPAN=466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:23:8.1:89.1,8.1,0:19:16:-89.12:89.12
2	220481216	143576:1	C	C[2:220481540[	35	PASS	EVDNC=ASSMB;HOMSEQ=TTTTC;MAPQ=60;MATEID=143576:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_220475501_220500501_164C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78
2	220481540	143576:2	T	]2:220481216]T	35	PASS	EVDNC=ASSMB;HOMSEQ=TTTTC;MAPQ=60;MATEID=143576:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_220475501_220500501_164C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78
2	230460594	146493:1	T	T[2:230460923[	34	PASS	EVDNC=ASSMB;HOMSEQ=GGTAATCTGTTTCTT;MAPQ=60;MATEID=146493:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_230447001_230472001_45C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
2	230460923	146493:2	G	]2:230460594]G	34	PASS	EVDNC=ASSMB;HOMSEQ=GGTAATCTGTTTCTT;MAPQ=60;MATEID=146493:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_230447001_230472001_45C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
2	232514141	146962:1	C	C[2:232515638[	25	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=146962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_232505001_232530001_66C;SPAN=1497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
2	232515638	146962:2	C	]2:232514141]C	25	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=146962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_232505001_232530001_66C;SPAN=1497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
2	237405139	148427:1	T	]2:237625329]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=148427:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_237601001_237626001_14C;SPAN=220190;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:15:9.3:102.3,9.3,0:34:0:-102.3:102.3
2	237517179	148353:1	G	]2:237517715]G	43	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=148353:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:237517179(-)-2:237517715(+)__2_237503001_237528001D;SPAN=536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:69:43.4:43.4,0,129.2:0:19:-43.32:45.76
2	237517715	148353:2	G	G[2:237517179[	43	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=148353:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:237517179(-)-2:237517715(+)__2_237503001_237528001D;SPAN=536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:69:43.4:43.4,0,129.2:0:19:-43.32:45.76
2	237561091	148404:1	T	]17:497801]T	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=148404:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_237552001_237577001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:41:21.5:21.5,0,80.9:7:6:-21.49:23.47
2	237623393	716693:1	C	C[14:104206456[	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=716693:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_104198501_104223501_154C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
2	237625329	148427:2	C	C[2:237405139[	99	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=148427:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_237601001_237626001_14C;SPAN=220190;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:15:9.3:102.3,9.3,0:34:0:-102.3:102.3
2	238591867	148627:1	C	C[2:238593091[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=148627:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:238591867(+)-2:238593091(-)__2_238581001_238606001D;SPAN=1224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
2	238593091	148627:2	A	]2:238591867]A	23	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=148627:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:238591867(+)-2:238593091(-)__2_238581001_238606001D;SPAN=1224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
2	240614048	918199:1	C	]22:34476818]C	25	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=918199:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_34471501_34496501_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99
3	503842	149668:1	T	T[3:504455[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CC;MAPQ=60;MATEID=149668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_490001_515001_9C;SPAN=613;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:5:9:-25.91:26.93
3	504455	149668:2	T	]3:503842]T	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CC;MAPQ=60;MATEID=149668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_490001_515001_9C;SPAN=613;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:5:9:-25.91:26.93
3	927890	149808:1	G	]3:953617]G	24	PASS	EVDNC=ASSMB;INSERTION=AGCCACG;MAPQ=60;MATEID=149808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_931001_956001_12C;SPAN=25727;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
3	953617	149808:2	A	A[3:927890[	24	PASS	EVDNC=ASSMB;INSERTION=AGCCACG;MAPQ=60;MATEID=149808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_931001_956001_12C;SPAN=25727;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
3	1263028	149945:1	T	T[3:1264837[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGT;MAPQ=60;MATEID=149945:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_1249501_1274501_18C;SPAN=1809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:6:2:-15.73:18.19
3	1264837	149945:2	T	]3:1263028]T	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGT;MAPQ=60;MATEID=149945:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_1249501_1274501_18C;SPAN=1809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:6:2:-15.73:18.19
3	1279142	149948:1	G	G[3:1279700[	20	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=149948:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_3_1274001_1299001_10C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:70:20:20,0,155.3:12:0:-19.94:26.09
3	1279700	149948:2	G	]3:1279142]G	20	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=149948:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_3_1274001_1299001_10C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:70:20:20,0,155.3:12:0:-19.94:26.09
3	1927848	150204:1	C	C[3:1930087[	26	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=150204:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_1911001_1936001_6C;SPAN=2239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:45:26.9:26.9,0,86.3:12:0:-26.96:28.7
3	1930087	150204:2	C	]3:1927848]C	26	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=150204:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_1911001_1936001_6C;SPAN=2239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:45:26.9:26.9,0,86.3:12:0:-26.96:28.7
3	2224305	150313:1	T	]3:2238399]T	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=150313:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_2229501_2254501_6C;SPAN=14094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:10:10:-46.91:46.91
3	2238399	150313:2	C	C[3:2224305[	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=150313:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_2229501_2254501_6C;SPAN=14094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:10:10:-46.91:46.91
3	2523747	150456:1	C	C[3:2567702[	31	PASS	EVDNC=ASSMB;INSERTION=AATTCCCATTTCTCCTCAA;MAPQ=60;MATEID=150456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_2548001_2573001_7C;SPAN=43955;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
3	2567702	150456:2	T	]3:2523747]T	31	PASS	EVDNC=ASSMB;INSERTION=AATTCCCATTTCTCCTCAA;MAPQ=60;MATEID=150456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_2548001_2573001_7C;SPAN=43955;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
3	4025374	150957:1	T	T[3:4027871[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=150957:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:4025374(+)-3:4027871(-)__3_4018001_4043001D;SPAN=2497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:55:17:15.3:168.3,15.3,0:0:55:-168.3:168.3
3	4027871	150957:2	G	]3:4025374]G	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=150957:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:4025374(+)-3:4027871(-)__3_4018001_4043001D;SPAN=2497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:55:17:15.3:168.3,15.3,0:0:55:-168.3:168.3
3	4765626	151198:1	A	A[3:4819268[	26	PASS	EVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=151198:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_4802001_4827001_11C;SPAN=53642;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
3	4819268	151198:2	A	]3:4765626]A	26	PASS	EVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=151198:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_4802001_4827001_11C;SPAN=53642;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
3	6311359	151854:1	T	]3:6311647]T	99	PASS	EVDNC=ASSMB;INSERTION=GAACCTCAGTAAGT;MAPQ=60;MATEID=151854:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_6296501_6321501_2C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:53:31.4:100.7,0,31.4:35:0:-102.5:102.5
3	6311647	151854:2	G	G[3:6311359[	99	PASS	EVDNC=ASSMB;INSERTION=GAACCTCAGTAAGT;MAPQ=60;MATEID=151854:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_6296501_6321501_2C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:53:31.4:100.7,0,31.4:35:0:-102.5:102.5
3	6604527	151993:1	C	[3:6612951[C	81	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAATTA;MAPQ=60;MATEID=151993:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AA;SCTG=c_3_6590501_6615501_5C;SPAN=8424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:40:18.5:81.2,0,18.5:21:11:-83.3:83.3
3	6604720	151995:1	A	A]3:6608526]	72	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=151995:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6604720(+)-3:6608526(+)__3_6590501_6615501D;SPAN=3806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:26:3.9:72.6,3.9,0:0:23:-73.74:73.74
3	6608526	151995:2	G	G]3:6604720]	72	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=151995:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6604720(+)-3:6608526(+)__3_6590501_6615501D;SPAN=3806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:26:3.9:72.6,3.9,0:0:23:-73.74:73.74
3	6608570	151999:1	T	T[3:6612945[	92	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=151999:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6608570(+)-3:6612945(-)__3_6590501_6615501D;SPAN=4375;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:5:8.4:92.4,8.4,0:0:30:-92.42:92.42
3	6612945	151999:2	A	]3:6608570]A	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=151999:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6608570(+)-3:6612945(-)__3_6590501_6615501D;SPAN=4375;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:5:8.4:92.4,8.4,0:0:30:-92.42:92.42
3	6612951	151993:2	T	[3:6604527[T	81	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAATTA;MAPQ=60;MATEID=151993:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AA;SCTG=c_3_6590501_6615501_5C;SPAN=8424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:40:18.5:81.2,0,18.5:21:11:-83.3:83.3
3	7404156	152269:1	T	]3:7437597]T	20	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=152269:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_7423501_7448501_25C;SPAN=33441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
3	7437597	152269:2	T	T[3:7404156[	20	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=152269:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_7423501_7448501_25C;SPAN=33441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
3	7997094	152479:1	T	]3:8055413]T	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=152479:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_8036001_8061001_9C;SPAN=58319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
3	8055413	152479:2	A	A[3:7997094[	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=152479:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_8036001_8061001_9C;SPAN=58319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
3	9340576	152847:1	C	]3:9357043]C	15	PASS	EVDNC=ASSMB;INSERTION=GGATTCCATGAGTCAGGCAGAC;MAPQ=60;MATEID=152847:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_9334501_9359501_22C;SPAN=16467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78
3	9357043	152847:2	A	A[3:9340576[	15	PASS	EVDNC=ASSMB;INSERTION=GGATTCCATGAGTCAGGCAGAC;MAPQ=60;MATEID=152847:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_9334501_9359501_22C;SPAN=16467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78
3	10636914	153237:1	T	T]11:78154046]	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAA;MAPQ=60;MATEID=153237:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_10633001_10658001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:10:4:-37.47:37.47
3	11599603	518254:1	C	C]9:130392964]	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTC;MAPQ=60;MATEID=518254:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_9_130389001_130414001_29C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:9:12:-49.51:49.51
3	11914405	153544:1	T	T[3:12871893[	52	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=153544:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914405(+)-3:12871893(-)__3_11907001_11932001D;SPAN=957488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:7:4.8:52.8,4.8,0:0:18:-52.81:52.81
3	11914580	153548:1	A	]3:12872086]A	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=153548:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914580(-)-3:12872086(+)__3_11907001_11932001D;SPAN=957506;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35
3	12871893	153544:2	T	]3:11914405]T	52	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=153544:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914405(+)-3:12871893(-)__3_11907001_11932001D;SPAN=957488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:7:4.8:52.8,4.8,0:0:18:-52.81:52.81
3	12872086	153548:2	A	A[3:11914580[	25	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=153548:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914580(-)-3:12872086(+)__3_11907001_11932001D;SPAN=957506;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35
3	13639803	154020:1	T	T[3:13640772[	75	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=154020:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:13639803(+)-3:13640772(-)__3_13622001_13647001D;SPAN=969;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:0:25:-75.92:75.92
3	13640772	154020:2	A	]3:13639803]A	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154020:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:13639803(+)-3:13640772(-)__3_13622001_13647001D;SPAN=969;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:0:25:-75.92:75.92
3	15230578	154422:1	G	]3:15359990]G	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=154422:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_15214501_15239501_5C;SPAN=129412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43
3	15359990	154422:2	T	T[3:15230578[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=154422:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_15214501_15239501_5C;SPAN=129412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43
3	17060242	154851:1	C	]3:17080219]C	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:17060242(-)-3:17080219(+)__3_17076501_17101501D;SPAN=19977;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:0:13:-37.47:37.47
3	17080219	154851:2	G	G[3:17060242[	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:17060242(-)-3:17080219(+)__3_17076501_17101501D;SPAN=19977;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:0:13:-37.47:37.47
3	20552852	155688:1	C	C[3:20553073[	2	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGGCAGTGGGAGCAGGCACTTC;MAPQ=60;MATEID=155688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_20531001_20556001_2C;SPAN=221;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:39:2.3:2.3,0,94.7:4:0:-2.241:7.735
3	20553073	155688:2	G	]3:20552852]G	2	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGGCAGTGGGAGCAGGCACTTC;MAPQ=60;MATEID=155688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_20531001_20556001_2C;SPAN=221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:39:2.3:2.3,0,94.7:4:0:-2.241:7.735
3	21370237	155889:1	A	]3:21373497]A	17	PASS	EVDNC=ASSMB;INSERTION=ATAAATGTTCTCCAATTTCTAC;MAPQ=60;MATEID=155889:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_21364001_21389001_12C;SPAN=3260;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24
3	21373497	155889:2	C	C[3:21370237[	17	PASS	EVDNC=ASSMB;INSERTION=ATAAATGTTCTCCAATTTCTAC;MAPQ=60;MATEID=155889:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_21364001_21389001_12C;SPAN=3260;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24
3	21682213	155995:1	T	T[3:21684475[	99	PASS	EVDNC=ASSMB;INSERTION=CTCTCTCTCTCTCTCTCTCTCTCC;MAPQ=60;MATEID=155995:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_3_21658001_21683001_0C;SPAN=2262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:6:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	21684475	155995:2	C	]3:21682213]C	99	PASS	EVDNC=ASSMB;INSERTION=CTCTCTCTCTCTCTCTCTCTCTCC;MAPQ=60;MATEID=155995:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_3_21658001_21683001_0C;SPAN=2262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:6:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	22050869	156124:1	G	G[3:22056304[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTCAATGTG;MAPQ=60;MATEID=156124:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_22050001_22075001_1C;SPAN=5435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:35:9.6:105.6,9.6,0:35:0:-105.6:105.6
3	22056304	156124:2	A	]3:22050869]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTCAATGTG;MAPQ=60;MATEID=156124:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_22050001_22075001_1C;SPAN=5435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:35:9.6:105.6,9.6,0:35:0:-105.6:105.6
3	23466045	167961:1	T	T[3:73822008[	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAT;MAPQ=60;MATEID=167961:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_73818501_73843501_134C;SPAN=50355963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:19:14.6:14.6,0,31.1:5:5:-14.47:14.88
3	26409479	157128:1	T	T[3:26410808[	92	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=157128:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_3_26386501_26411501_35C;SPAN=1329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42
3	26410808	157128:2	T	]3:26409479]T	92	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=157128:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_3_26386501_26411501_35C;SPAN=1329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42
3	28705934	157608:1	C	[3:28772274[C	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=157608:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_28763001_28788001_11C;SPAN=66340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:6:8:-32.06:32.06
3	28758676	157609:1	T	T]3:28780225]	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TATAG;MAPQ=60;MATEID=157609:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_28763001_28788001_0C;SPAN=21549;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:9:9:-49.51:49.51
3	28772274	157608:2	A	[3:28705934[A	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=157608:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_28763001_28788001_11C;SPAN=66340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:6:8:-32.06:32.06
3	28780225	157609:2	A	A]3:28758676]	49	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TATAG;MAPQ=60;MATEID=157609:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_28763001_28788001_0C;SPAN=21549;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:9:9:-49.51:49.51
3	32060560	158220:1	C	C[3:32066392[	92	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=158220:2;MATENM=7;NM=3;NUMPARTS=2;SCTG=c_3_32046001_32071001_6C;SPAN=5832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42
3	32066392	158220:2	C	]3:32060560]C	92	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=158220:1;MATENM=3;NM=7;NUMPARTS=2;SCTG=c_3_32046001_32071001_6C;SPAN=5832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42
3	32765329	158374:1	A	A[3:32766533[	46	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=158374:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:32765329(+)-3:32766533(-)__3_32756501_32781501D;SPAN=1204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:2:4.2:46.2,4.2,0:0:15:-46.21:46.21
3	32766533	158374:2	T	]3:32765329]T	46	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=158374:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:32765329(+)-3:32766533(-)__3_32756501_32781501D;SPAN=1204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:2:4.2:46.2,4.2,0:0:15:-46.21:46.21
3	41580812	160035:2	A	]1:44104205]A	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=160035:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_41576501_41601501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
3	41609700	160041:2	A	A[1:44098924[	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=160041:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:44098924(-)-3:41609700(+)__3_41601001_41626001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71
3	41969203	160126:1	G	]3:42014202]G	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=160126:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:41969203(-)-3:42014202(+)__3_41993001_42018001D;SPAN=44999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
3	42014202	160126:2	C	C[3:41969203[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=160126:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:41969203(-)-3:42014202(+)__3_41993001_42018001D;SPAN=44999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
3	42796989	160264:1	C	C[3:42799318[	59	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=160264:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:42796989(+)-3:42799318(-)__3_42777001_42802001D;SPAN=2329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41
3	42799318	160264:2	A	]3:42796989]A	59	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=160264:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:42796989(+)-3:42799318(-)__3_42777001_42802001D;SPAN=2329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41
3	43549152	160436:1	G	]3:43790599]G	49	PASS	DISC_MAPQ=52;EVDNC=ASDIS;INSERTION=AAT;MAPQ=60;MATEID=160436:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_43781501_43806501_1C;SPAN=241447;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:9:4.5:49.5,4.5,0:12:13:-49.51:49.51
3	43790599	160436:2	C	C[3:43549152[	49	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=AAT;MAPQ=60;MATEID=160436:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_43781501_43806501_1C;SPAN=241447;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:9:4.5:49.5,4.5,0:12:13:-49.51:49.51
3	44699499	160603:1	C	[3:44700771[C	82	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=160603:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_44688001_44713001_21C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:15:7.5:82.5,7.5,0:17:14:-82.52:82.52
3	44699521	160604:1	A	A]3:44700793]	35	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=160604:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_44688001_44713001_3C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:7:7:-37.11:37.11
3	44700771	160603:2	T	[3:44699499[T	82	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=160603:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_44688001_44713001_21C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:15:7.5:82.5,7.5,0:17:14:-82.52:82.52
3	44700793	160604:2	G	G]3:44699521]	35	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=160604:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_44688001_44713001_3C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:7:7:-37.11:37.11
3	47737029	161208:1	A	]4:100603230]A	32	PASS	EVDNC=ASSMB;HOMSEQ=ACC;MAPQ=60;MATEID=161208:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_47726001_47751001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
3	47825187	161281:1	G	G[4:100380547[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=161281:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:47825187(+)-4:100380547(-)__3_47824001_47849001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
3	48900724	161458:1	C	C[3:48902495[	46	PASS	EVDNC=ASSMB;HOMSEQ=TGAACC;MAPQ=60;MATEID=161458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_48877501_48902501_6C;SPAN=1771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:15:0:-46.21:46.21
3	48902495	161458:2	T	]3:48900724]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TGAACC;MAPQ=60;MATEID=161458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_48877501_48902501_6C;SPAN=1771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:15:0:-46.21:46.21
3	50184842	161692:1	C	]3:50407164]C	28	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=161692:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_50176001_50201001_0C;SPAN=222322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
3	50407164	161692:2	G	G[3:50184842[	28	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=161692:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_50176001_50201001_0C;SPAN=222322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
3	51393313	161916:1	G	G]3:51496273]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=161916:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:51393313(+)-3:51496273(+)__3_51376501_51401501D;SPAN=102960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
3	51496273	161916:2	C	C]3:51393313]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=161916:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:51393313(+)-3:51496273(+)__3_51376501_51401501D;SPAN=102960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
3	57537096	163075:1	A	A[3:57538371[	52	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=163075:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:57537096(+)-3:57538371(-)__3_57526001_57551001D;SPAN=1275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81
3	57538371	163075:2	A	]3:57537096]A	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=163075:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:57537096(+)-3:57538371(-)__3_57526001_57551001D;SPAN=1275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81
3	60296487	163598:1	T	T[3:60313542[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=163598:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_60294501_60319501_28C;SPAN=17055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
3	60313542	163598:2	A	]3:60296487]A	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=163598:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_60294501_60319501_28C;SPAN=17055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
3	60765503	163725:1	A	]3:60814698]A	42	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=163725:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_60809001_60834001_1C;SPAN=49195;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:14:0:-42.91:42.91
3	60814698	163725:2	A	A[3:60765503[	42	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=163725:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_60809001_60834001_1C;SPAN=49195;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:14:0:-42.91:42.91
3	61619502	809610:1	G	[17:58558972[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=809610:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58555001_58580001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:99:40:27.6:303.6,27.6,0:43:68:-303.7:303.7
3	61639528	809639:1	C	[17:58608924[C	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=809639:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_58604001_58629001_60C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:106:0.2:0.2,0,264.2:3:7:0.08672:16.63
3	61807360	164077:1	T	[20:54727260[T	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTACA;MAPQ=60;MATEID=164077:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_61789001_61814001_51C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:98:15.5:15.5,0,230:9:8:-15.37:26.69
3	61900033	164115:1	T	T[20:47231949[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GA;MAPQ=60;MATEID=164115:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_61887001_61912001_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:74:0.9:0,0.9,188.1:4:3:0.9948:10.96
3	62083030	164220:1	A	A[3:62083994[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=164220:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62083001_62108001_96C;SPAN=964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:142:16.6:0,16.6,389.4:6:2:16.81:11.23
3	62083994	164220:2	A	]3:62083030]A	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=164220:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62083001_62108001_96C;SPAN=964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:142:16.6:0,16.6,389.4:6:2:16.81:11.23
3	62586884	164465:1	A	A]8:72874467]	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=164465:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62573001_62598001_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:89:5.1:0,5.1,234.3:4:3:5.211:10.46
3	62653401	27425:2	G	G[1:113798539[	15	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=27425:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113778001_113803001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
3	62727512	164561:1	A	[20:54778249[A	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=164561:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_62720001_62745001_150C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:40:78:83.9:110.3,0,83.9:29:24:-110.3:110.3
3	62730756	164554:2	A	A[1:113905874[	29	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=164554:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_62720001_62745001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:72:29.3:29.3,0,151.4:15:0:-29.28:34.02
3	62828754	164615:1	T	T[3:62829192[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=164615:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62818001_62843001_96C;SPAN=438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:145:10.9:0,10.9,386.1:6:4:11.05:15.36
3	62829192	164615:2	G	]3:62828754]G	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=164615:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62818001_62843001_96C;SPAN=438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:145:10.9:0,10.9,386.1:6:4:11.05:15.36
3	62858227	165000:1	C	]3:63528112]C	62	PASS	EVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=165000:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_63504001_63529001_97C;SPAN=669885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:82:62.9:62.9,0,142.1:26:0:-62.78:64.53
3	62865005	164629:1	T	T[20:53847498[	46	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=164629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62842501_62867501_139C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:82:46.4:46.4,0,158.6:21:0:-46.27:49.79
3	62865047	164618:2	G	[1:114215076[G	99	PASS	DISC_MAPQ=59;EVDNC=TSI_G;HOMSEQ=T;INSERTION=GAATATGGAAGAACCCCCAAGAAATGTTTTGAACACAGTA;MAPQ=60;MATEID=164618:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_3_62842501_62867501_111C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:39:97:99:101.6,0,141.2:29:15:-101.5:101.9
3	62871544	164633:2	T	[1:114236570[T	96	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=164633:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_62867001_62892001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:81:96.2:96.2,0,106.1:26:15:-96.07:96.11
3	62965447	165001:1	A	[3:63505004[A	13	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=165001:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_117C;SPAN=539557;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:82:13.4:13.4,0,191.6:9:3:-13.26:22.64
3	62965785	164691:1	G	G]3:62966272]	0	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=164691:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:62965785(+)-3:62966272(+)__3_62965001_62990001D;SPAN=487;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:202:30.1:0,30.1,567.7:0:8:30.37:12.07
3	62966272	164691:2	T	T]3:62965785]	0	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=164691:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:62965785(+)-3:62966272(+)__3_62965001_62990001D;SPAN=487;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:202:30.1:0,30.1,567.7:0:8:30.37:12.07
3	63046108	165003:1	G	[3:63510792[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=165003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_88C;SPAN=464684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:51:88:77.6:143.6,0,77.6:36:34:-144.7:144.7
3	63094518	164981:1	C	C[3:63456384[	28	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=164981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63455001_63480001_2C;SPAN=361866;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:77:28.1:28.1,0,163.4:15:0:-27.87:33.53
3	63456384	164981:2	G	]3:63094518]G	28	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=164981:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63455001_63480001_2C;SPAN=361866;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:77:28.1:28.1,0,163.4:15:0:-27.87:33.53
3	63505004	165001:2	T	[3:62965447[T	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=165001:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_117C;SPAN=539557;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:82:13.4:13.4,0,191.6:9:3:-13.26:22.64
3	63510792	165003:2	G	[3:63046108[G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=165003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_88C;SPAN=464684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:51:88:77.6:143.6,0,77.6:36:34:-144.7:144.7
3	63528112	165000:2	C	C[3:62858227[	62	PASS	EVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=165000:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_97C;SPAN=669885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:82:62.9:62.9,0,142.1:26:0:-62.78:64.53
3	63626756	165075:2	C	]1:114690356]C	50	PASS	EVDNC=ASSMB;INSERTION=CAAAAGC;MAPQ=60;MATEID=165075:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63626501_63651501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:81:50:50,0,152.3:22:0:-49.85:52.82
3	63718451	810346:1	T	]17:60802106]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=810346:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_60784501_60809501_53C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:51:80:53.6:146,0,53.6:51:0:-148.1:148.1
3	63755964	165192:1	C	C[3:63992058[	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=165192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63969501_63994501_3C;SPAN=236094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:56:119:99:151.4,0,148.1:56:0:-151.4:151.4
3	63948014	165185:2	G	G[1:106192958[	99	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=165185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63945001_63970001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:53:14.7:161.7,14.7,0:49:0:-160.5:160.5
3	63976823	809737:1	A	]17:58731201]A	38	PASS	EVDNC=ASSMB;HOMSEQ=ACCT;MAPQ=60;MATEID=809737:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_58726501_58751501_107C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:88:38:38,0,183.2:19:0:-37.98:43.43
3	63992058	165192:2	C	]3:63755964]C	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=165192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63969501_63994501_3C;SPAN=236094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:56:119:99:151.4,0,148.1:56:0:-151.4:151.4
3	64698562	27426:2	T	]1:113801494]T	25	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=27426:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_113778001_113803001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06
3	66074255	165649:1	C	]3:66074906]C	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=165649:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_66052001_66077001_132C;SPAN=651;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:39:12.2:84.8,0,12.2:16:21:-87.73:87.73
3	66074906	165649:2	C	C[3:66074255[	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=165649:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_66052001_66077001_132C;SPAN=651;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:39:12.2:84.8,0,12.2:16:21:-87.73:87.73
3	66713349	165844:1	G	]3:66713486]G	29	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=165844:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_66689001_66714001_52C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:35:29.9:29.9,0,56.3:12:0:-29.77:30.28
3	66713486	165844:2	G	G[3:66713349[	29	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=165844:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_66689001_66714001_52C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:35:29.9:29.9,0,56.3:12:0:-29.77:30.28
3	67443400	166105:1	C	C[3:67446375[	36	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=166105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:67443400(+)-3:67446375(-)__3_67424001_67449001D;SPAN=2975;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
3	67446375	166105:2	A	]3:67443400]A	36	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=166105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:67443400(+)-3:67446375(-)__3_67424001_67449001D;SPAN=2975;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
3	67849380	166213:1	A	A[3:67851162[	23	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=166213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67840501_67865501_21C;SPAN=1782;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59
3	67851162	166213:2	T	]3:67849380]T	23	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=166213:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67840501_67865501_21C;SPAN=1782;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59
3	67959153	166245:1	A	A[3:67960425[	59	PASS	EVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=166245:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67938501_67963501_55C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
3	67960425	166245:2	C	]3:67959153]C	59	PASS	EVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=166245:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67938501_67963501_55C;SPAN=1272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
3	68585622	166416:1	T	T[3:68591103[	18	PASS	EVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=166416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68575501_68600501_24C;SPAN=5481;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27
3	68591103	166416:2	A	]3:68585622]A	18	PASS	EVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=166416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68575501_68600501_24C;SPAN=5481;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27
3	68841064	166474:1	A	A[3:68841345[	27	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAATCCA;MAPQ=60;MATEID=166474:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68820501_68845501_187C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73
3	68841345	166474:2	A	]3:68841064]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAATCCA;MAPQ=60;MATEID=166474:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68820501_68845501_187C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73
3	70894164	167013:1	T	T[3:70894499[	99	PASS	DISC_MAPQ=42;EVDNC=ASDIS;INSERTION=GGT;MAPQ=60;MATEID=167013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_70878501_70903501_21C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:5:9:99,9,0:27:8:-99.02:99.02
3	70894499	167013:2	T	]3:70894164]T	99	PASS	DISC_MAPQ=31;EVDNC=ASDIS;INSERTION=GGT;MAPQ=60;MATEID=167013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_70878501_70903501_21C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:5:9:99,9,0:27:8:-99.02:99.02
3	72330575	167459:1	A	A[3:72330856[	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACGAAGACAGTA;MAPQ=60;MATEID=167459:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_72324001_72349001_32C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39
3	72330856	167459:2	A	]3:72330575]A	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACGAAGACAGTA;MAPQ=60;MATEID=167459:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_72324001_72349001_32C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39
3	73013926	167710:1	C	C[3:73014404[	43	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=167710:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_3_73010001_73035001_71C;SPAN=478;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:5:10:-44.87:44.87
3	73014404	167710:2	G	]3:73013926]G	43	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=167710:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_3_73010001_73035001_71C;SPAN=478;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:5:10:-44.87:44.87
3	73822008	167961:2	A	]3:23466045]A	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAT;MAPQ=60;MATEID=167961:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_73818501_73843501_134C;SPAN=50355963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:19:14.6:14.6,0,31.1:5:5:-14.47:14.88
3	74716275	168219:1	T	T[3:74716585[	46	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGTTATTTTCT;MAPQ=60;MATEID=168219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_74700501_74725501_73C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
3	74716585	168219:2	T	]3:74716275]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGTTATTTTCT;MAPQ=60;MATEID=168219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_74700501_74725501_73C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
3	75414219	189909:1	T	T[3:130080581[	49	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=189909:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414219(+)-3:130080581(-)__3_130070501_130095501D;SPAN=54666362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51
3	75414274	378752:1	T	]7:6923050]T	30	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=378752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414274(-)-7:6923050(+)__7_6909001_6934001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:0:11:-30.82:30.82
3	75662822	872855:1	A	A]20:29418432]	23	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=872855:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75662822(+)-20:29418432(+)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
3	75668011	168580:1	A	A]20:29412524]	37	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=168580:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75668011(+)-20:29412524(+)__3_75656001_75681001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:44:37.1:37.1,0,73.4:0:15:-37.15:37.81
3	75673010	872869:1	A	[20:29407505[A	33	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=872869:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75673010(-)-20:29407505(-)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:45:33.5:33.5,0,79.7:0:14:-33.57:34.6
3	75703640	168761:1	T	[20:29375944[T	66	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=168761:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75703640(-)-20:29375944(-)__3_75680501_75705501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:26:0.6:66,0.6,0:0:22:-69.34:69.34
3	80013716	170496:1	A	A]3:80016128]	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=170496:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_79992501_80017501_19C;SPAN=2412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:9:4:-37.05:37.05
3	80015320	170497:1	A	[3:80015952[A	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTTG;MAPQ=60;MATEID=170497:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_79992501_80017501_23C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:15:6:-46.05:46.05
3	80015952	170497:2	C	[3:80015320[C	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTTG;MAPQ=60;MATEID=170497:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_79992501_80017501_23C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:15:6:-46.05:46.05
3	80016128	170496:2	A	A]3:80013716]	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=170496:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_79992501_80017501_19C;SPAN=2412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:9:4:-37.05:37.05
3	80876163	170815:1	T	T[3:80877454[	95	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=170815:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_80874501_80899501_60C;SPAN=1291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:36:3.3:95.7,3.3,0:31:0:-98.33:98.33
3	80877454	170815:2	T	]3:80876163]T	95	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=170815:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_80874501_80899501_60C;SPAN=1291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:36:3.3:95.7,3.3,0:31:0:-98.33:98.33
3	81296931	170944:1	G	G[3:81297230[	13	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGAGTACCTGTG;MAPQ=60;MATEID=170944:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81291001_81316001_36C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:22:13.7:13.7,0,40.1:6:0:-13.62:14.42
3	81297230	170944:2	A	]3:81296931]A	13	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGAGTACCTGTG;MAPQ=60;MATEID=170944:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81291001_81316001_36C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:22:13.7:13.7,0,40.1:6:0:-13.62:14.42
3	81858356	171075:1	C	C[3:81858662[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAACTGGTAAACC;MAPQ=60;MATEID=171075:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81854501_81879501_38C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:20:9.6:105.6,9.6,0:27:11:-105.6:105.6
3	81858662	171075:2	A	]3:81858356]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAACTGGTAAACC;MAPQ=60;MATEID=171075:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81854501_81879501_38C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:20:9.6:105.6,9.6,0:27:11:-105.6:105.6
3	83803977	171677:1	T	T[3:83806199[	89	PASS	EVDNC=ASSMB;HOMSEQ=TATATGGCCTTTT;MAPQ=60;MATEID=171677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_83790001_83815001_51C;SPAN=2222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:20:8.1:89.1,8.1,0:29:0:-89.12:89.12
3	83806199	171677:2	T	]3:83803977]T	89	PASS	EVDNC=ASSMB;HOMSEQ=TATATGGCCTTTT;MAPQ=60;MATEID=171677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_83790001_83815001_51C;SPAN=2222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:20:8.1:89.1,8.1,0:29:0:-89.12:89.12
3	84055791	171778:1	C	C[3:84058234[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=171778:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_84035001_84060001_31C;SPAN=2443;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:8:2:-23.53:23.59
3	84058234	171778:2	A	]3:84055791]A	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=171778:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_84035001_84060001_31C;SPAN=2443;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:8:2:-23.53:23.59
3	88404582	173339:1	T	T[3:88404859[	66	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=173339:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_88396001_88421001_37C;SPAN=277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:21:6:66,6,0:22:0:-66.02:66.02
3	88404859	173339:2	C	]3:88404582]C	66	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=173339:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_88396001_88421001_37C;SPAN=277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:21:6:66,6,0:22:0:-66.02:66.02
3	89460367	398109:1	T	]7:62334070]T	44	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=398109:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_62328001_62353001_253C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:5:14:-45.49:45.49
3	90350671	173897:1	T	]3:90351556]T	21	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TCCAAATATCCACTTGCAGATTTTACAAAAAG;MAPQ=39;MATEID=173897:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90331501_90356501_118C;SPAN=885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:31:21.2:21.2,0,54.2:2:8:-21:21.92
3	90351556	173897:2	G	G[3:90350671[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCCAAATATCCACTTGCAGATTTTACAAAAAG;MAPQ=60;MATEID=173897:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90331501_90356501_118C;SPAN=885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:31:21.2:21.2,0,54.2:2:8:-21:21.92
3	90402956	173942:1	A	]3:90403683]A	26	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AAAGAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTG;MAPQ=60;MATEID=173942:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90380501_90405501_95C;SPAN=727;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:8:6:-26.4:28.44
3	90403683	173942:2	G	G[3:90402956[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTG;MAPQ=60;MATEID=173942:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90380501_90405501_95C;SPAN=727;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:8:6:-26.4:28.44
3	90498706	174243:1	G	G[3:90599779[	17	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=174243:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90498706(+)-3:90599779(-)__3_90478501_90503501D;SPAN=101073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
3	90536612	174785:1	C	C[3:90537933[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAATTCTTCTGTCTAGTTTTATATGAAGAAATC;MAPQ=60;MATEID=174785:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_90527501_90552501_470C;SPAN=1321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:78:21.2:21.2,0,173:8:6:-20.99:28.09
3	90537933	174785:2	T	]3:90536612]T	21	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAATTCTTCTGTCTAGTTTTATATGAAGAAATC;MAPQ=60;MATEID=174785:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_90527501_90552501_470C;SPAN=1321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:78:21.2:21.2,0,173:8:6:-20.99:28.09
3	90599779	174243:2	T	]3:90498706]T	17	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=174243:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90498706(+)-3:90599779(-)__3_90478501_90503501D;SPAN=101073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
3	90785200	177847:1	A	A[3:90900668[	66	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=177847:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90785200(+)-3:90900668(-)__3_90895001_90920001D;SPAN=115468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:8:6:66,6,0:0:22:-66.02:66.02
3	90793288	177493:1	A	]3:90968900]A	19	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=177493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90793288(-)-3:90968900(+)__3_90772501_90797501D;SPAN=175612;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:0:10:-19.52:22.68
3	90832509	177854:1	T	]3:90914890]T	26	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=177854:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90832509(-)-3:90914890(+)__3_90895001_90920001D;SPAN=82381;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
3	90863052	178318:1	T	T[3:91078769[	79	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=178318:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90863052(+)-3:91078769(-)__3_91066501_91091501D;SPAN=215717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:0:26:-81.69:81.69
3	90871032	178673:1	A	A[3:91221920[	27	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=178673:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90871032(+)-3:91221920(-)__3_91213501_91238501D;SPAN=350888;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:0:10:-27.41:27.41
3	90900668	177847:2	C	]3:90785200]C	66	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=177847:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90785200(+)-3:90900668(-)__3_90895001_90920001D;SPAN=115468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:8:6:66,6,0:0:22:-66.02:66.02
3	90914890	177854:2	C	C[3:90832509[	26	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=177854:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90832509(-)-3:90914890(+)__3_90895001_90920001D;SPAN=82381;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
3	90925354	177943:1	T	]3:91069782]T	49	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=177943:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90925354(-)-3:91069782(+)__3_90919501_90944501D;SPAN=144428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:4:4.5:49.5,4.5,0:0:17:-49.51:49.51
3	90968900	177493:2	T	T[3:90793288[	19	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=177493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90793288(-)-3:90968900(+)__3_90772501_90797501D;SPAN=175612;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:0:10:-19.52:22.68
3	91069782	177943:2	A	A[3:90925354[	49	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=177943:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90925354(-)-3:91069782(+)__3_90919501_90944501D;SPAN=144428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:4:4.5:49.5,4.5,0:0:17:-49.51:49.51
3	91078769	178318:2	T	]3:90863052]T	79	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=178318:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90863052(+)-3:91078769(-)__3_91066501_91091501D;SPAN=215717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:0:26:-81.69:81.69
3	91221920	178673:2	C	]3:90871032]C	27	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=178673:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90871032(+)-3:91221920(-)__3_91213501_91238501D;SPAN=350888;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:0:10:-27.41:27.41
3	93736476	179203:1	G	]3:93737280]G	37	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=179203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:93736476(-)-3:93737280(+)__3_93737001_93762001D;SPAN=804;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93
3	93737280	179203:2	T	T[3:93736476[	37	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=179203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:93736476(-)-3:93737280(+)__3_93737001_93762001D;SPAN=804;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93
3	95397364	179722:1	T	T[3:95397679[	49	PASS	EVDNC=ASSMB;HOMSEQ=CCAACCTGACTTACTT;MAPQ=60;MATEID=179722:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95378501_95403501_7C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
3	95397679	179722:2	C	]3:95397364]C	49	PASS	EVDNC=ASSMB;HOMSEQ=CCAACCTGACTTACTT;MAPQ=60;MATEID=179722:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95378501_95403501_7C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
3	95746924	179868:1	G	G[3:95751920[	35	PASS	EVDNC=ASSMB;HOMSEQ=CAAG;MAPQ=60;MATEID=179868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_73C;SPAN=4996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:13:0:-35.04:35.04
3	95749273	179871:1	A	]3:95752156]A	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGCATAGGG;MAPQ=60;MATEID=179871:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_35C;SPAN=2883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:23:10:-85.82:85.82
3	95751920	179868:2	C	]3:95746924]C	35	PASS	EVDNC=ASSMB;HOMSEQ=CAAG;MAPQ=60;MATEID=179868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_73C;SPAN=4996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:13:0:-35.04:35.04
3	95752156	179871:2	T	T[3:95749273[	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGCATAGGG;MAPQ=60;MATEID=179871:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_35C;SPAN=2883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:23:10:-85.82:85.82
3	99180219	180863:1	T	T[3:99183546[	26	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=180863:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_99176001_99201001_115C;SPAN=3327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
3	99183546	180863:2	C	]3:99180219]C	26	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=180863:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_99176001_99201001_115C;SPAN=3327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
3	99909938	181038:1	T	T[3:99910788[	40	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=181038:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_99886501_99911501_48C;SPAN=850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
3	99910788	181038:2	C	]3:99909938]C	40	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=181038:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_99886501_99911501_48C;SPAN=850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
3	100066519	181071:1	T	T[3:100066813[	59	PASS	EVDNC=ASSMB;HOMSEQ=GGCTTTGCTTCTT;MAPQ=60;MATEID=181071:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_100058001_100083001_45C;SPAN=294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15
3	100066813	181071:2	G	]3:100066519]G	59	PASS	EVDNC=ASSMB;HOMSEQ=GGCTTTGCTTCTT;MAPQ=60;MATEID=181071:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_100058001_100083001_45C;SPAN=294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15
3	101428791	181443:1	G	G[3:101431411[	26	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=ATTG;MAPQ=60;MATEID=181443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101430001_101455001_8C;SPAN=2620;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:9:5:-26.41:26.41
3	101431411	181443:2	A	]3:101428791]A	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATTG;MAPQ=60;MATEID=181443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101430001_101455001_8C;SPAN=2620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:9:5:-26.41:26.41
3	101469536	181461:1	A	A[3:101469849[	25	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AAAAGAACAGA;MAPQ=60;MATEID=181461:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101454501_101479501_125C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:5:5:-25.74:25.74
3	101469849	181461:2	A	]3:101469536]A	25	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=AAAAGAACAGA;MAPQ=60;MATEID=181461:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101454501_101479501_125C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:5:5:-25.74:25.74
3	102564943	181797:1	T	T[3:102565269[	16	PASS	EVDNC=ASSMB;HOMSEQ=ATTTCCTCTTCTT;MAPQ=60;MATEID=181797:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_102557001_102582001_6C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
3	102565269	181797:2	A	]3:102564943]A	16	PASS	EVDNC=ASSMB;HOMSEQ=ATTTCCTCTTCTT;MAPQ=60;MATEID=181797:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_102557001_102582001_6C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
3	103091520	181926:1	T	T[3:103091820[	62	PASS	EVDNC=ASSMB;HOMSEQ=TAGTTTTATTTTTCT;MAPQ=60;MATEID=181926:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_3_103071501_103096501_29C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68
3	103091820	181926:2	T	]3:103091520]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TAGTTTTATTTTTCT;MAPQ=60;MATEID=181926:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_3_103071501_103096501_29C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68
3	103194123	181974:1	A	A[3:103195276[	35	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=181974:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_103194001_103219001_10C;SPAN=1153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:25:26:35.9,0,26:13:0:-35.95:35.95
3	103195276	181974:2	T	]3:103194123]T	35	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=181974:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_103194001_103219001_10C;SPAN=1153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:25:26:35.9,0,26:13:0:-35.95:35.95
3	103962954	671890:1	T	]13:60886851]T	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=671890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_60882501_60907501_30C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:9:4:-33.01:33.01
3	104229404	182318:1	T	T[3:104240690[	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=182318:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104223001_104248001_62C;SPAN=11286;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:2:7:-20.79:20.87
3	104240690	182318:2	T	]3:104229404]T	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=182318:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104223001_104248001_62C;SPAN=11286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:2:7:-20.79:20.87
3	104559356	182457:1	A	A[3:104560203[	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=182457:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104541501_104566501_2C;SPAN=847;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	104560203	182457:2	A	]3:104559356]A	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=182457:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104541501_104566501_2C;SPAN=847;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	107017130	183282:1	G	G[3:107017386[	18	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=183282:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_107016001_107041001_83C;SPAN=256;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42
3	107017386	183282:2	G	]3:107017130]G	18	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=183282:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_107016001_107041001_83C;SPAN=256;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42
3	107319102	183337:1	G	G[3:107321486[	85	PASS	EVDNC=ASSMB;INSERTION=AAAAT;MAPQ=60;MATEID=183337:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_107310001_107335001_68C;SPAN=2384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:21:7.8:85.8,7.8,0:28:0:-85.82:85.82
3	107321486	183337:2	G	]3:107319102]G	85	PASS	EVDNC=ASSMB;INSERTION=AAAAT;MAPQ=60;MATEID=183337:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_107310001_107335001_68C;SPAN=2384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:21:7.8:85.8,7.8,0:28:0:-85.82:85.82
3	108262809	183955:1	A	[3:109509118[A	20	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=183955:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:108262809(-)-3:109509118(-)__3_109490501_109515501D;SPAN=1246309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
3	108561275	183679:1	G	]3:108624761]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=183679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_108608501_108633501_41C;SPAN=63486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:17:4.8:52.8,4.8,0:18:0:-52.81:52.81
3	108571285	183658:1	A	]3:108599231]A	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=183658:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_108559501_108584501_45C;SPAN=27946;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:9:8:-41.77:41.77
3	108599231	183658:2	T	T[3:108571285[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=183658:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_108559501_108584501_45C;SPAN=27946;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:9:8:-41.77:41.77
3	108624761	183679:2	G	G[3:108561275[	52	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=183679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_108608501_108633501_41C;SPAN=63486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:17:4.8:52.8,4.8,0:18:0:-52.81:52.81
3	109509118	183955:2	T	[3:108262809[T	20	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=183955:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:108262809(-)-3:109509118(-)__3_109490501_109515501D;SPAN=1246309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
3	110032910	350614:1	A	[6:77939704[A	47	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=350614:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_77934501_77959501_20C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:8:9:-49.48:49.48
3	110694547	184409:2	C	C[1:108952236[	89	PASS	EVDNC=ASSMB;INSERTION=TTGCAG;MAPQ=60;MATEID=184409:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_110691001_110716001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:12:8.1:89.1,8.1,0:29:0:-89.12:89.12
3	111555239	475914:1	T	[8:127521585[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=AAAAAAATAAAAAA;MAPQ=60;MATEID=475914:2;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_8_127498001_127523001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:87:45:24.3:267.3,24.3,0:46:56:-267.4:267.4
3	112384218	184910:1	T	T[3:112395203[	26	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=184910:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:112384218(+)-3:112395203(-)__3_112381501_112406501D;SPAN=10985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
3	112395203	184910:2	C	]3:112384218]C	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=184910:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:112384218(+)-3:112395203(-)__3_112381501_112406501D;SPAN=10985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
3	113481549	185291:1	A	]3:113597111]A	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=185291:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_113582001_113607001_18C;SPAN=115562;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
3	113597111	185291:2	C	C[3:113481549[	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=185291:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_113582001_113607001_18C;SPAN=115562;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
3	114574669	185573:1	A	A[3:114647553[	19	PASS	EVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=185573:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_114635501_114660501_3C;SPAN=72884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89
3	114647553	185573:2	A	]3:114574669]A	19	PASS	EVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=185573:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_114635501_114660501_3C;SPAN=72884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89
3	116391306	186143:1	G	G[3:116836522[	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=186143:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_116816001_116841001_39C;SPAN=445216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:9:0.8:20.6,0,0.8:6:4:-21.46:21.46
3	116556437	186069:1	G	G[3:116556749[	21	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATCTTCAG;MAPQ=60;MATEID=186069:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_116546501_116571501_32C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:8:0:-21.35:21.36
3	116556749	186069:2	A	]3:116556437]A	21	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATCTTCAG;MAPQ=60;MATEID=186069:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_116546501_116571501_32C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:8:0:-21.35:21.36
3	116836522	186143:2	A	]3:116391306]A	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=186143:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_116816001_116841001_39C;SPAN=445216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:9:0.8:20.6,0,0.8:6:4:-21.46:21.46
3	120222955	187040:1	A	]3:120223088]A	77	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=187040:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_120221501_120246501_22C;SPAN=133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:55:60.5:77,0,60.5:28:0:-77.06:77.06
3	120223088	187040:2	T	T[3:120222955[	77	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=187040:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_120221501_120246501_22C;SPAN=133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:55:60.5:77,0,60.5:28:0:-77.06:77.06
3	122934047	187839:1	A	]12:49498997]A	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=187839:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:122934047(-)-12:49498997(+)__3_122916501_122941501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
3	124690602	188279:1	G	[20:47378938[G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=188279:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_124680501_124705501_76C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:7:12:-50.34:50.34
3	125089786	188472:1	T	[Un_KN707699v1_decoy:1[T	85	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=188472:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_125072501_125097501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:11:7.8:85.8,7.8,0:28:0:-85.82:85.82
3	125217451	188523:1	T	T[3:125218320[	38	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=188523:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_125195001_125220001_17C;SPAN=869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
3	125218320	188523:2	G	]3:125217451]G	38	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=188523:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_125195001_125220001_17C;SPAN=869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
3	125720746	188658:1	G	]3:125743434]G	26	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=188658:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:125720746(-)-3:125743434(+)__3_125709501_125734501D;SPAN=22688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
3	125743434	188658:2	A	A[3:125720746[	26	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=188658:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:125720746(-)-3:125743434(+)__3_125709501_125734501D;SPAN=22688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
3	126640095	189005:1	T	T[3:126640407[	35	PASS	EVDNC=ASSMB;HOMSEQ=GCTGCTTGTGTTTTCT;MAPQ=60;MATEID=189005:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_126616001_126641001_28C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	126640407	189005:2	G	]3:126640095]G	35	PASS	EVDNC=ASSMB;HOMSEQ=GCTGCTTGTGTTTTCT;MAPQ=60;MATEID=189005:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_126616001_126641001_28C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	128140300	987204:1	C	]Un_KN707627v1_decoy:5821]C	56	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=987204:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_478_1_5821_13C;SPAN=-1;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11
3	128657391	611288:1	C	[11:129051675[C	17	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GGCTGGG;MAPQ=60;MATEID=611288:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_129041501_129066501_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:4:3:-17.77:17.94
3	130044539	189911:1	C	C[3:130087903[	72	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=189911:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_130070501_130095501_18C;SPAN=43364;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62
3	130080581	189909:2	C	]3:75414219]C	49	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=189909:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414219(+)-3:130080581(-)__3_130070501_130095501D;SPAN=54666362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51
3	130087903	189911:2	A	]3:130044539]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=189911:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_130070501_130095501_18C;SPAN=43364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62
3	130167162	189995:1	T	T[12:8307812[	23	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=189995:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167162(+)-12:8307812(-)__3_130144001_130169001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11
3	130167390	614848:1	C	]12:8308047]C	22	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=614848:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167390(-)-12:8308047(+)__12_8305501_8330501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
3	131958971	190506:1	T	T[3:131959300[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATACACCTTTCT;MAPQ=60;MATEID=190506:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_131957001_131982001_39C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:59:29.6:29.6,0,118.7:11:6:-29.63:32.66
3	131959300	190506:2	G	]3:131958971]G	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATACACCTTTCT;MAPQ=60;MATEID=190506:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_131957001_131982001_39C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:59:29.6:29.6,0,118.7:11:6:-29.63:32.66
3	131989409	190518:1	T	T[3:131994541[	62	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TG;INSERTION=TCTCATATCTGTTTTCCTGGTAGAATACAGCACCATGAGGGTAGGACTCT;MAPQ=60;MATEID=190518:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5132;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:21:5.7:62.7,5.7,0:21:0:-62.72:62.72
3	131989515	190519:1	C	[3:131994541[C	59	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TG;MAPQ=60;MATEID=190519:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5026;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:20:5.4:59.4,5.4,0:17:7:-59.41:59.41
3	131994541	190518:2	T	]3:131989409]T	62	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TG;INSERTION=TCTCATATCTGTTTTCCTGGTAGAATACAGCACCATGAGGGTAGGACTCT;MAPQ=60;MATEID=190518:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5132;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:21:5.7:62.7,5.7,0:21:0:-62.72:62.72
3	131994541	190519:2	T	[3:131989515[T	59	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TG;MAPQ=60;MATEID=190519:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5026;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:20:5.4:59.4,5.4,0:17:7:-59.41:59.41
3	132270290	190645:1	G	G[3:132276206[	29	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=190645:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:132270290(+)-3:132276206(-)__3_132275501_132300501D;SPAN=5916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71
3	132276206	190645:2	A	]3:132270290]A	29	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=190645:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:132270290(+)-3:132276206(-)__3_132275501_132300501D;SPAN=5916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71
3	133884925	191035:1	A	]3:133885105]A	8	PASS	EVDNC=ASSMB;HOMSEQ=ACCAGAGGATGGGGGACTCACACACC;MAPQ=60;MATEID=191035:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_133868001_133893001_0C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:30:8:8,0,67.4:5:0:-8.072:10.8
3	133885105	191035:2	C	C[3:133884925[	8	PASS	EVDNC=ASSMB;HOMSEQ=ACCAGAGGATGGGGGACTCACACACC;MAPQ=60;MATEID=191035:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_133868001_133893001_0C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:30:8:8,0,67.4:5:0:-8.072:10.8
3	136302171	191628:1	C	C[3:136307358[	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=191628:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_136293501_136318501_36C;SPAN=5187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:19:7.2:79.2,7.2,0:17:19:-79.22:79.22
3	136307358	191628:2	T	]3:136302171]T	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=191628:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_136293501_136318501_36C;SPAN=5187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:19:7.2:79.2,7.2,0:17:19:-79.22:79.22
3	137595612	192027:1	T	T[3:137597601[	59	PASS	EVDNC=ASSMB;INSERTION=TATCTCTGCGCC;MAPQ=60;MATEID=192027:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_137592001_137617001_25C;SPAN=1989;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
3	137597601	192027:2	C	]3:137595612]C	59	PASS	EVDNC=ASSMB;INSERTION=TATCTCTGCGCC;MAPQ=60;MATEID=192027:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_137592001_137617001_25C;SPAN=1989;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
3	139885156	234286:1	A	A]4:65936763]	75	PASS	DISC_MAPQ=9;EVDNC=ASDIS;INSERTION=GG;MAPQ=31;MATEID=234286:2;MATENM=0;NM=12;NUMPARTS=2;SCTG=c_4_65929501_65954501_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:21:4:-75.92:75.92
3	140825566	192860:1	T	T[3:140828201[	31	PASS	EVDNC=ASSMB;HOMSEQ=CCACT;MAPQ=60;MATEID=192860:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_140826001_140851001_38C;SPAN=2635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06
3	140828201	192860:2	C	]3:140825566]C	31	PASS	EVDNC=ASSMB;HOMSEQ=CCACT;MAPQ=60;MATEID=192860:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_140826001_140851001_38C;SPAN=2635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06
3	144071898	193746:1	T	]3:144089433]T	41	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=193746:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_144084501_144109501_46C;SPAN=17535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:8:8:-42.92:42.92
3	144089433	193746:2	T	T[3:144071898[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=193746:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_144084501_144109501_46C;SPAN=17535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:8:8:-42.92:42.92
3	146015409	194390:1	C	]3:146015560]C	34	PASS	EVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=194390:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_145995501_146020501_107C;SPAN=151;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12
3	146015560	194390:2	T	T[3:146015409[	34	PASS	EVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=194390:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_145995501_146020501_107C;SPAN=151;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12
3	146088175	203693:1	C	]3:172347176]C	25	PASS	EVDNC=ASSMB;HOMSEQ=CAGT;MAPQ=60;MATEID=203693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_172333001_172358001_99C;SPAN=26259001;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66
3	146667403	194657:1	A	A[3:146677075[	65	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=194657:2;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_3_146657001_146682001_118C;SPAN=9672;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82
3	146672618	194660:1	A	]3:146677378]A	99	PASS	EVDNC=ASSMB;INSERTION=ATTGGGGAG;MAPQ=60;MATEID=194660:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_146657001_146682001_45C;SPAN=4760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:29:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	146677075	194657:2	C	]3:146667403]C	65	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=194657:1;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_3_146657001_146682001_118C;SPAN=9672;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82
3	146677378	194660:2	A	A[3:146672618[	99	PASS	EVDNC=ASSMB;INSERTION=ATTGGGGAG;MAPQ=60;MATEID=194660:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_146657001_146682001_45C;SPAN=4760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:29:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	148563653	195155:1	G	G[3:148567640[	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=195155:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_3_148543501_148568501_31C;SPAN=3987;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:25:12:132,12,0:43:0:-132:132
3	148567640	195155:2	A	]3:148563653]A	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=195155:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_3_148543501_148568501_31C;SPAN=3987;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:25:12:132,12,0:43:0:-132:132
3	148761366	195224:1	C	C]3:148781756]	82	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=195224:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761366(+)-3:148781756(+)__3_148739501_148764501D;SPAN=20390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52
3	148761604	195225:1	A	[3:148781404[A	35	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=195225:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761604(-)-3:148781404(-)__3_148739501_148764501D;SPAN=19800;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78
3	148781404	195225:2	T	[3:148761604[T	35	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=195225:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761604(-)-3:148781404(-)__3_148739501_148764501D;SPAN=19800;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78
3	148781756	195224:2	A	A]3:148761366]	82	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=195224:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761366(+)-3:148781756(+)__3_148739501_148764501D;SPAN=20390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52
3	148849015	195256:1	T	T[3:148849324[	99	PASS	EVDNC=ASSMB;HOMSEQ=AGACCTCTTT;MAPQ=60;MATEID=195256:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_148837501_148862501_66C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:22:9.9:108.9,9.9,0:36:0:-108.9:108.9
3	148849324	195256:2	A	]3:148849015]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AGACCTCTTT;MAPQ=60;MATEID=195256:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_148837501_148862501_66C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:22:9.9:108.9,9.9,0:36:0:-108.9:108.9
3	149126599	195347:1	A	A[3:149126914[	27	PASS	EVDNC=ASSMB;HOMSEQ=AAGATGCAAAAATA;MAPQ=60;MATEID=195347:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149107001_149132001_114C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77
3	149126914	195347:2	A	]3:149126599]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AAGATGCAAAAATA;MAPQ=60;MATEID=195347:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149107001_149132001_114C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77
3	149550689	195535:1	A	A[3:149552360[	85	PASS	EVDNC=ASSMB;HOMSEQ=AGGGA;MAPQ=60;MATEID=195535:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149548001_149573001_52C;SPAN=1671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
3	149552360	195535:2	A	]3:149550689]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AGGGA;MAPQ=60;MATEID=195535:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149548001_149573001_52C;SPAN=1671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
3	152031061	205410:1	G	G]3:176727181]	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=205410:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_176718501_176743501_72C;SPAN=24696120;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:23:11:-89.12:89.12
3	152593949	196598:1	T	T[3:152595367[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGGTCACTGTTT;MAPQ=60;MATEID=196598:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152586001_152611001_23C;SPAN=1418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:44:2.4:115.5,2.4,0:38:0:-120.7:120.7
3	152595367	196598:2	A	]3:152593949]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGGTCACTGTTT;MAPQ=60;MATEID=196598:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152586001_152611001_23C;SPAN=1418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:44:2.4:115.5,2.4,0:38:0:-120.7:120.7
3	152899403	196720:1	T	T[3:152899593[	5	PASS	EVDNC=ASSMB;INSERTION=AGCTAGGTA;MAPQ=60;MATEID=196720:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152880001_152905001_13C;SPAN=190;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
3	152899593	196720:2	T	]3:152899403]T	5	PASS	EVDNC=ASSMB;INSERTION=AGCTAGGTA;MAPQ=60;MATEID=196720:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152880001_152905001_13C;SPAN=190;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
3	155693184	197706:1	T	T[3:155693494[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAGCACAGACTT;MAPQ=60;MATEID=197706:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_155673001_155698001_87C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:23:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	155693494	197706:2	A	]3:155693184]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAGCACAGACTT;MAPQ=60;MATEID=197706:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_155673001_155698001_87C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:23:9.3:102.3,9.3,0:34:0:-102.3:102.3
3	158399128	198545:1	T	T[3:158399456[	9	PASS	EVDNC=ASSMB;HOMSEQ=CTATTATTTCCTTTTT;MAPQ=60;MATEID=198545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158392501_158417501_63C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:156:9.1:9.1,0,382.1:16:0:-8.966:30.94
3	158399456	198545:2	C	]3:158399128]C	9	PASS	EVDNC=ASSMB;HOMSEQ=CTATTATTTCCTTTTT;MAPQ=60;MATEID=198545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158392501_158417501_63C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:156:9.1:9.1,0,382.1:16:0:-8.966:30.94
3	158632951	198663:1	C	C[3:158634123[	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=198663:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158613001_158638001_13C;SPAN=1172;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:43:20.9:20.9,0,86.9:10:0:-20.92:23.23
3	158634123	198663:2	C	]3:158632951]C	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=198663:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158613001_158638001_13C;SPAN=1172;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:43:20.9:20.9,0,86.9:10:0:-20.92:23.23
3	158729656	198943:1	C	]3:159791445]C	47	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=198943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_159789001_159814001_25C;SPAN=1061789;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:13:10:-46.91:46.91
3	158733071	198708:1	C	]3:158737844]C	56	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=198708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158735501_158760501_49C;SPAN=4773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:36:32.9:56,0,32.9:14:16:-56.16:56.16
3	158737844	198708:2	A	A[3:158733071[	56	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=198708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158735501_158760501_49C;SPAN=4773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:36:32.9:56,0,32.9:14:16:-56.16:56.16
3	159306188	198837:1	T	]3:159306326]T	43	PASS	EVDNC=ASSMB;HOMSEQ=TAATAAC;MAPQ=60;MATEID=198837:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_159299001_159324001_42C;SPAN=138;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:68:43.7:43.7,0,126.2:19:0:-43.61:45.9
3	159306326	198837:2	C	C[3:159306188[	43	PASS	EVDNC=ASSMB;HOMSEQ=TAATAAC;MAPQ=60;MATEID=198837:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_159299001_159324001_42C;SPAN=138;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:68:43.7:43.7,0,126.2:19:0:-43.61:45.9
3	159791445	198943:2	T	T[3:158729656[	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=198943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_159789001_159814001_25C;SPAN=1061789;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:13:10:-46.91:46.91
3	161025129	199594:1	T	]3:161713703]T	55	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=199594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161700001_161725001_21C;SPAN=688574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:37:35.9:55.7,0,35.9:20:0:-55.81:55.81
3	161528940	199540:1	T	T[3:161529260[	99	PASS	EVDNC=ASSMB;HOMSEQ=AGAATGTGTCATTCCT;MAPQ=60;MATEID=199540:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161528501_161553501_66C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:36:11.7:128.7,11.7,0:42:0:-128.7:128.7
3	161529260	199540:2	A	]3:161528940]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AGAATGTGTCATTCCT;MAPQ=60;MATEID=199540:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161528501_161553501_66C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:36:11.7:128.7,11.7,0:42:0:-128.7:128.7
3	161569425	199605:1	C	]3:161742789]C	24	PASS	EVDNC=ASSMB;INSERTION=CCTCA;MAPQ=60;MATEID=199605:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_161724501_161749501_109C;SPAN=173364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
3	161713703	199594:2	A	A[3:161025129[	55	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=199594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161700001_161725001_21C;SPAN=688574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:37:35.9:55.7,0,35.9:20:0:-55.81:55.81
3	161742789	199605:2	A	A[3:161569425[	24	PASS	EVDNC=ASSMB;INSERTION=CCTCA;MAPQ=60;MATEID=199605:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_161724501_161749501_109C;SPAN=173364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
3	162690522	200063:1	T	T[3:162690825[	17	PASS	EVDNC=ASSMB;HOMSEQ=TATGTTTCTGTTTT;MAPQ=60;MATEID=200063:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_162680001_162705001_149C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:8:0:-17.98:19.13
3	162690825	200063:2	T	]3:162690522]T	17	PASS	EVDNC=ASSMB;HOMSEQ=TATGTTTCTGTTTT;MAPQ=60;MATEID=200063:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_162680001_162705001_149C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:8:0:-17.98:19.13
3	162827575	200142:1	G	[3:162829871[G	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=200142:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_162827001_162852001_35C;SPAN=2296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:35:29.9:29.9,0,56.3:9:7:-29.77:30.28
3	162829871	200142:2	A	[3:162827575[A	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=200142:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_162827001_162852001_35C;SPAN=2296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:35:29.9:29.9,0,56.3:9:7:-29.77:30.28
3	163047113	200254:1	T	T[3:163051297[	34	PASS	EVDNC=ASSMB;INSERTION=GT;MAPQ=60;MATEID=200254:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_163047501_163072501_40C;SPAN=4184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
3	163051297	200254:2	A	]3:163047113]A	34	PASS	EVDNC=ASSMB;INSERTION=GT;MAPQ=60;MATEID=200254:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_163047501_163072501_40C;SPAN=4184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
3	163386382	200395:1	G	G[Un_KN707713v1_decoy:1[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=200395:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_163366001_163391001_33C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:26:10.2:112.2,10.2,0:37:0:-112.2:112.2
3	163386382	988285:1	G	G[Un_KN707713v1_decoy:1[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_564_1_1308_4C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:11:9.6:105.6,9.6,0:35:0:-105.6:105.6
3	165861102	283092:1	G	]5:26230726]G	39	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=283092:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:165861102(-)-5:26230726(+)__5_26215001_26240001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:0:13:-39.61:39.61
3	166722402	201766:1	C	[5:51925610[C	57	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=201766:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:166722402(-)-5:51925610(-)__3_166698001_166723001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:31:17.9:57.5,0,17.9:0:20:-58.24:58.24
3	170401792	203025:1	A	A[3:170402090[	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAAAAACTAAATAATA;MAPQ=60;MATEID=203025:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_170397501_170422501_40C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:67:25:18.6:204.6,18.6,0:46:26:-204.7:204.7
3	170402090	203025:2	A	]3:170401792]A	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAAAACTAAATAATA;MAPQ=60;MATEID=203025:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_170397501_170422501_40C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:67:25:18.6:204.6,18.6,0:46:26:-204.7:204.7
3	172347176	203693:2	T	T[3:146088175[	25	PASS	EVDNC=ASSMB;HOMSEQ=CAGT;MAPQ=60;MATEID=203693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_172333001_172358001_99C;SPAN=26259001;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66
3	174952168	204975:1	C	]3:175621829]C	70	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=204975:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175616001_175641001_58C;SPAN=669661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:24:0:-73.47:73.47
3	175307660	204822:1	C	C[3:175421297[	31	PASS	EVDNC=ASSMB;HOMSEQ=CAGC;MAPQ=60;MATEID=204822:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175420001_175445001_37C;SPAN=113637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:13:0:-31.39:32.26
3	175421297	204822:2	C	]3:175307660]C	31	PASS	EVDNC=ASSMB;HOMSEQ=CAGC;MAPQ=60;MATEID=204822:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175420001_175445001_37C;SPAN=113637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:13:0:-31.39:32.26
3	175448963	204886:1	G	G[3:175512033[	17	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=204886:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175493501_175518501_16C;SPAN=63070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63
3	175512033	204886:2	T	]3:175448963]T	17	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=204886:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175493501_175518501_16C;SPAN=63070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63
3	175621829	204975:2	C	C[3:174952168[	70	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=204975:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175616001_175641001_58C;SPAN=669661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:24:0:-73.47:73.47
3	176102403	205151:1	G	]3:176102572]G	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=205151:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_176081501_176106501_72C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:55:34.1:34.1,0,103.4:15:0:-34.06:36.05
3	176102572	205151:2	C	C[3:176102403[	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=205151:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_176081501_176106501_72C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:55:34.1:34.1,0,103.4:15:0:-34.06:36.05
3	176189690	916262:1	C	]22:28669436]C	6	PASS	EVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=916262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_73C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:105:6.8:6.8,0,257.6:11:0:-6.796:21.38
3	176434607	205326:1	A	]3:176444476]A	99	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=205326:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_176424501_176449501_53C;SPAN=9869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:46:13.7:99.5,0,13.7:34:0:-102.7:102.7
3	176444476	205326:2	A	A[3:176434607[	99	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=205326:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_176424501_176449501_53C;SPAN=9869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:46:13.7:99.5,0,13.7:34:0:-102.7:102.7
3	176727181	205410:2	A	A]3:152031061]	89	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=38;MATEID=205410:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_176718501_176743501_72C;SPAN=24696120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:23:11:-89.12:89.12
3	177122919	371708:1	C	C[6:153202309[	92	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=371708:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:177122919(+)-6:153202309(-)__6_153198501_153223501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:6:8.4:92.4,8.4,0:0:31:-92.42:92.42
3	177126512	371709:1	T	T[6:153202067[	69	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATC;INSERTION=T;MAPQ=60;MATEID=371709:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
3	178832345	206192:1	C	C[3:178833084[	95	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=206192:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_178825501_178850501_51C;SPAN=739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:15:8.7:95.7,8.7,0:32:0:-95.72:95.72
3	178833084	206192:2	G	]3:178832345]G	95	PASS	EVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=206192:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_178825501_178850501_51C;SPAN=739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:15:8.7:95.7,8.7,0:32:0:-95.72:95.72
3	178849865	206201:1	A	A[3:178850556[	79	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206201:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_178850001_178875001_90C;SPAN=691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:18:7.2:79.2,7.2,0:26:0:-79.22:79.22
3	178850556	206201:2	A	]3:178849865]A	79	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206201:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_178850001_178875001_90C;SPAN=691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:18:7.2:79.2,7.2,0:26:0:-79.22:79.22
3	178965525	206219:1	A	A[3:178965814[	25	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_178948001_178973001_1C;SPAN=289;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:40:25.1:25.1,0,74.6:11:0:-25.07:26.48
3	178965814	206219:2	A	]3:178965525]A	25	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_178948001_178973001_1C;SPAN=289;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:40:25.1:25.1,0,74.6:11:0:-25.07:26.48
3	179936553	206454:1	C	C[3:179937017[	82	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=206454:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_179928001_179953001_81C;SPAN=464;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:27:7.5:82.5,7.5,0:27:0:-82.52:82.52
3	179937017	206454:2	T	]3:179936553]T	82	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=206454:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_179928001_179953001_81C;SPAN=464;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:27:7.5:82.5,7.5,0:27:0:-82.52:82.52
3	182153134	207028:1	C	]3:182153263]C	94	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=207028:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182133001_182158001_26C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:65:67.7:94.1,0,67.7:34:0:-94.15:94.15
3	182153263	207028:2	A	A[3:182153134[	94	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=207028:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182133001_182158001_26C;SPAN=129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:65:67.7:94.1,0,67.7:34:0:-94.15:94.15
3	182830325	207207:1	A	]3:182975990]A	30	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=207207:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182966001_182991001_41C;SPAN=145665;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:7:10:-30.82:30.82
3	182975990	207207:2	A	A[3:182830325[	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=207207:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182966001_182991001_41C;SPAN=145665;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:7:10:-30.82:30.82
3	183712226	560853:1	T	T[10:94531640[	23	PASS	EVDNC=ASSMB;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTT;MAPQ=60;MATEID=560853:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_10_94521001_94546001_53C;SECONDARY;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
3	184159056	207741:1	G	G[3:184159616[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTG;MAPQ=60;MATEID=207741:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_184142001_184167001_71C;SPAN=560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:11:8:-41.77:41.77
3	184159616	207741:2	G	]3:184159056]G	41	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTG;MAPQ=60;MATEID=207741:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_184142001_184167001_71C;SPAN=560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:11:8:-41.77:41.77
3	185432358	110651:2	T	]2:128082406]T	66	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TTTTTGTGTTTTTAGTAGAGACAGGGTTTCAC;MAPQ=33;MATEID=110651:1;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_2_128061501_128086501_81C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:13:6:66,6,0:18:9:-66.02:66.02
3	185794263	208397:1	G	G[3:185794490[	35	PASS	EVDNC=ASSMB;INSERTION=GGGATCACAGAGC;MAPQ=60;MATEID=208397:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_3_185783501_185808501_121C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	185794490	208397:2	C	]3:185794263]C	35	PASS	EVDNC=ASSMB;INSERTION=GGGATCACAGAGC;MAPQ=60;MATEID=208397:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_3_185783501_185808501_121C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
3	186858374	482537:1	T	[8:143618862[T	52	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=482537:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143619001_143644001_92C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:1:4.8:52.8,4.8,0:13:9:-52.81:52.81
3	186863244	208824:1	G	G[3:186867496[	86	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATATTGCAAATAG;MAPQ=60;MATEID=208824:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_186861501_186886501_57C;SPAN=4252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98
3	186867496	208824:2	G	]3:186863244]G	86	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATATTGCAAATAG;MAPQ=60;MATEID=208824:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_186861501_186886501_57C;SPAN=4252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98
3	187108877	208922:1	T	T[3:187109182[	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATTTGTT;MAPQ=60;MATEID=208922:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_187106501_187131501_36C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:25:8.1:89.1,8.1,0:23:6:-89.12:89.12
3	187109182	208922:2	A	]3:187108877]A	89	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAAATTTGTT;MAPQ=60;MATEID=208922:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_187106501_187131501_36C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:25:8.1:89.1,8.1,0:23:6:-89.12:89.12
3	188357984	209436:1	A	]3:188394904]A	29	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=209436:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_188380501_188405501_6C;SPAN=36920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
3	188394904	209436:2	T	T[3:188357984[	29	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=209436:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_188380501_188405501_6C;SPAN=36920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
3	190019559	210058:1	A	A[3:190022736[	66	PASS	EVDNC=ASSMB;HOMSEQ=CTCA;MAPQ=60;MATEID=210058:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190022001_190047001_21C;SPAN=3177;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:14:6:66,6,0:22:0:-66.02:66.02
3	190022736	210058:2	C	]3:190019559]C	66	PASS	EVDNC=ASSMB;HOMSEQ=CTCA;MAPQ=60;MATEID=210058:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190022001_190047001_21C;SPAN=3177;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:14:6:66,6,0:22:0:-66.02:66.02
3	190237631	210179:1	T	T[3:190237921[	48	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTGTTTTTT;MAPQ=60;MATEID=210179:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190218001_190243001_78C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77
3	190237921	210179:2	C	]3:190237631]C	48	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTGTTTTTT;MAPQ=60;MATEID=210179:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190218001_190243001_78C;SPAN=290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77
3	190572861	210321:1	T	T[3:190573148[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATGCTTTGTT;MAPQ=60;MATEID=210321:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_190561001_190586001_38C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:7:7:-39.01:39.01
3	190573148	210321:2	A	]3:190572861]A	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATGCTTTGTT;MAPQ=60;MATEID=210321:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_190561001_190586001_38C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:7:7:-39.01:39.01
3	190952018	210426:1	A	A[3:190952332[	85	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAGTGTA;MAPQ=60;MATEID=210426:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_3_190928501_190953501_0C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:28:7.8:85.8,7.8,0:26:0:-85.43:85.43
3	190952332	210426:2	A	]3:190952018]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAGTGTA;MAPQ=60;MATEID=210426:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_3_190928501_190953501_0C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:28:7.8:85.8,7.8,0:26:0:-85.43:85.43
3	190978865	210444:1	C	C[3:190979149[	43	PASS	EVDNC=ASSMB;HOMSEQ=ATATAAATTACCC;MAPQ=60;MATEID=210444:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_190977501_191002501_1C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
3	190979149	210444:2	A	]3:190978865]A	43	PASS	EVDNC=ASSMB;HOMSEQ=ATATAAATTACCC;MAPQ=60;MATEID=210444:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_190977501_191002501_1C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
3	192345405	211008:1	A	A[3:192345703[	85	PASS	EVDNC=ASSMB;HOMSEQ=AAGATATAACATA;MAPQ=60;MATEID=211008:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_192325001_192350001_16C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
3	192345703	211008:2	A	]3:192345405]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AAGATATAACATA;MAPQ=60;MATEID=211008:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_192325001_192350001_16C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
3	193059075	211257:1	T	T[3:193064810[	49	PASS	EVDNC=ASSMB;HOMSEQ=TTTGT;MAPQ=60;MATEID=211257:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193060001_193085001_76C;SPAN=5735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51
3	193064810	211257:2	T	]3:193059075]T	49	PASS	EVDNC=ASSMB;HOMSEQ=TTTGT;MAPQ=60;MATEID=211257:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193060001_193085001_76C;SPAN=5735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51
3	193473457	211437:1	T	]3:193543259]T	69	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=211437:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193525501_193550501_36C;SPAN=69802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
3	193543259	211437:2	T	T[3:193473457[	69	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=211437:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193525501_193550501_36C;SPAN=69802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
3	194569581	211821:1	C	C[3:194569800[	16	PASS	EVDNC=ASSMB;HOMSEQ=CAGGAATTCGAGACCAGCCTGACCAAC;MAPQ=60;MATEID=211821:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194554501_194579501_37C;SPAN=219;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
3	194569800	211821:2	C	]3:194569581]C	16	PASS	EVDNC=ASSMB;HOMSEQ=CAGGAATTCGAGACCAGCCTGACCAAC;MAPQ=60;MATEID=211821:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194554501_194579501_37C;SPAN=219;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
3	194663426	211869:1	C	C[3:194663749[	67	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCTGCCTCAGAGAAAGCCTTTCCCTTCTTC;MAPQ=60;MATEID=211869:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_194652501_194677501_173C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:32:11:67.1,0,11:16:8:-68.92:68.92
3	194663749	211869:2	C	]3:194663426]C	67	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCTGCCTCAGAGAAAGCCTTTCCCTTCTTC;MAPQ=60;MATEID=211869:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_194652501_194677501_173C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:32:11:67.1,0,11:16:8:-68.92:68.92
3	194678016	211879:1	C	C[3:194679562[	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=211879:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:194678016(+)-3:194679562(-)__3_194677001_194702001D;SPAN=1546;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:0:11:-29.57:29.57
3	194679562	211879:2	A	]3:194678016]A	29	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=211879:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:194678016(+)-3:194679562(-)__3_194677001_194702001D;SPAN=1546;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:0:11:-29.57:29.57
3	194822565	211925:1	G	G[3:194825528[	39	PASS	EVDNC=ASSMB;HOMSEQ=GGTG;MAPQ=60;MATEID=211925:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_168C;SPAN=2963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77
3	194822581	211927:1	C	]3:194825702]C	50	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=211927:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_194824001_194849001_105C;SPAN=3121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01
3	194825528	211925:2	G	]3:194822565]G	39	PASS	EVDNC=ASSMB;HOMSEQ=GGTG;MAPQ=60;MATEID=211925:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_168C;SPAN=2963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77
3	194825702	211927:2	C	C[3:194822581[	50	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=211927:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_105C;SPAN=3121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01
3	194894010	211954:1	T	T[3:194894311[	58	PASS	EVDNC=ASSMB;HOMSEQ=CTATGCGCTCTTTCTT;MAPQ=60;MATEID=211954:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_194873001_194898001_35C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
3	194894311	211954:2	C	]3:194894010]C	58	PASS	EVDNC=ASSMB;HOMSEQ=CTATGCGCTCTTTCTT;MAPQ=60;MATEID=211954:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_194873001_194898001_35C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
3	195886346	883494:1	C	[20:48827701[C	1	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=CTACTT;MAPQ=60;MATEID=883494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48804001_48829001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:55:1.1:1.1,0,136.4:3:3:-1.045:9.394
3	196523895	213005:1	C	C[3:196524559[	21	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=213005:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_196514501_196539501_24C;SPAN=664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:66:21.2:21.2,0,143.3:12:0:-21.06:26.43
3	196524559	213005:2	C	]3:196523895]C	21	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=213005:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_196514501_196539501_24C;SPAN=664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:66:21.2:21.2,0,143.3:12:0:-21.06:26.43
3	196591623	213057:1	T	[11:45377756[T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=213057:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_196588001_196613001_28C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:15:12.6:138.6,12.6,0:44:7:-138.6:138.6
3	196602062	213065:1	A	A[3:196602380[	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCA;MAPQ=60;MATEID=213065:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_196588001_196613001_4C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:70:3:0,3,181.5:5:0:3.171:8.849
3	196602380	213065:2	G	]3:196602062]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCA;MAPQ=60;MATEID=213065:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_196588001_196613001_4C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:70:3:0,3,181.5:5:0:3.171:8.849
3	197032518	213254:1	G	G[3:197033039[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTTGCTGACTGGTTGGGG;MAPQ=60;MATEID=213254:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_197029001_197054001_99C;SPAN=521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:8:7:-39.11:39.25
3	197033039	213254:2	C	]3:197032518]C	39	PASS	DISC_MAPQ=14;EVDNC=ASDIS;HOMSEQ=CTCTTGCTGACTGGTTGGGG;MAPQ=23;MATEID=213254:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_197029001_197054001_99C;SPAN=521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:8:7:-39.11:39.25
3	197384100	213329:1	A	]3:197384470]A	99	PASS	DISC_MAPQ=53;EVDNC=ASDIS;INSERTION=TATCCGTAGTGTATTTGCGAG;MAPQ=60;MATEID=213329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_197372001_197397001_24C;SPAN=370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:104:99:122.6,0,139.1:43:8:-122.6:122.7
3	197384470	213329:2	C	C[3:197384100[	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TATCCGTAGTGTATTTGCGAG;MAPQ=60;MATEID=213329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_197372001_197397001_24C;SPAN=370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:104:99:122.6,0,139.1:43:8:-122.6:122.7
3	197384611	213342:1	T	T[3:197389970[	67	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GATAGTTTACTATCTGTAGTGCATTTGGGATAGT;INSERTION=GTCTGCACCACAT;MAPQ=60;MATEID=213342:2;MATENM=4;NM=7;NUMPARTS=15;SCTG=c_3_197372001_197397001_86C;SPAN=5359;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:112:67.7:67.7,0,212.9:30:0:-67.55:71.82
3	197389970	213342:2	T	]3:197384611]T	67	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GATAGTTTACTATCTGTAGTGCATTTGGGATAGT;INSERTION=GTCTGCACCACAT;MAPQ=60;MATEID=213342:1;MATENM=7;NM=4;NUMPARTS=15;SCTG=c_3_197372001_197397001_86C;SPAN=5359;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:112:67.7:67.7,0,212.9:30:0:-67.55:71.82
3	197390161	213403:1	T	]3:197390694]T	0	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=213403:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:197390161(-)-3:197390694(+)__3_197372001_197397001D;SPAN=533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:116:6:0,6,303.6:0:8:6.199:14.03
3	197390694	213403:2	A	A[3:197390161[	0	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=213403:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:197390161(-)-3:197390694(+)__3_197372001_197397001D;SPAN=533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:116:6:0,6,303.6:0:8:6.199:14.03
3	197391017	213415:1	T	T[3:197391554[	99	PASS	DISC_MAPQ=31;EVDNC=TSI_G;HOMSEQ=CATTTGGGATAGTTTGCTATCTGTAGCACATTTGGGATAGTTT;INSERTION=GCTATCTGTAGCACATTTGGGATAGTTTCCTA;MAPQ=20;MATEID=213415:2;MATENM=2;NM=0;NUMPARTS=4;SCTG=c_3_197372001_197397001_83C;SPAN=537;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:152:99:112.7,0,267.8:42:8:-112.4:116
3	197391554	213415:2	T	]3:197391017]T	99	PASS	DISC_MAPQ=27;EVDNC=TSI_G;HOMSEQ=CATTTGGGATAGTTTGCTATCTGTAGCACATTTGGGATAGTTT;INSERTION=GCTATCTGTAGCACATTTGGGATAGTTTCCTA;MAPQ=31;MATEID=213415:1;MATENM=0;NM=2;NUMPARTS=4;SCTG=c_3_197372001_197397001_83C;SPAN=537;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:152:99:112.7,0,267.8:42:8:-112.4:116
4	127126	213760:1	A	A[4:133267[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=213760:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_122501_147501_96C;SPAN=6141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:4:6:-23.53:23.59
4	133267	213760:2	A	]4:127126]A	23	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=213760:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_122501_147501_96C;SPAN=6141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:4:6:-23.53:23.59
4	152957	562623:1	T	[10:100092116[T	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=562623:2;MATENM=24;NM=0;NUMPARTS=2;SCTG=c_10_100082501_100107501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:5:8:-36.31:36.31
4	270179	213843:1	C	C[4:270450[	62	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTCTCC;MAPQ=60;MATEID=213843:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_269501_294501_49C;SPAN=271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54
4	270450	213843:2	A	]4:270179]A	62	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTCTCC;MAPQ=60;MATEID=213843:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_269501_294501_49C;SPAN=271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54
4	407263	213896:1	G	G[4:407581[	15	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAAGGCGG;MAPQ=60;MATEID=213896:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_392001_417001_70C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24
4	407581	213896:2	A	]4:407263]A	15	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAAGGCGG;MAPQ=60;MATEID=213896:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_392001_417001_70C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24
4	2561244	214587:1	A	A[4:2561536[	4	PASS	EVDNC=ASSMB;HOMSEQ=GCCCAGGCTGGAGTGCAGTGGCGCA;MAPQ=60;MATEID=214587:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_2548001_2573001_13C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:32:4.4:4.4,0,73.7:4:0:-4.209:8.1
4	2561536	214587:2	G	]4:2561244]G	4	PASS	EVDNC=ASSMB;HOMSEQ=GCCCAGGCTGGAGTGCAGTGGCGCA;MAPQ=60;MATEID=214587:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_2548001_2573001_13C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:32:4.4:4.4,0,73.7:4:0:-4.209:8.1
4	3594169	496905:1	A	[9:65437620[A	23	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=496905:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:3594169(-)-9:65437620(-)__9_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
4	3814792	214986:1	T	]4:3815327]T	57	PASS	DISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=TATACCCACTCTATCAGGCTGTACT;MAPQ=60;MATEID=214986:2;MATENM=3;NM=91;NUMPARTS=2;SCTG=c_4_3797501_3822501_110C;SPAN=535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:55:57.2:57.2,0,80.3:18:5:-57.16:57.39
4	3815327	214986:2	T	T[4:3814792[	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATACCCACTCTATCAGGCTGTACT;MAPQ=60;MATEID=214986:1;MATENM=91;NM=3;NUMPARTS=2;SCTG=c_4_3797501_3822501_110C;SPAN=535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:55:57.2:57.2,0,80.3:18:5:-57.16:57.39
4	4129499	215168:1	T	T[4:4130496[	24	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=215168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4129499(+)-4:4130496(-)__4_4116001_4141001D;SPAN=997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:0:9:-24.67:24.67
4	4130496	215168:2	A	]4:4129499]A	24	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=215168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4129499(+)-4:4130496(-)__4_4116001_4141001D;SPAN=997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:0:9:-24.67:24.67
4	4164684	215182:1	T	]4:4170704]T	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=215182:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4164684(-)-4:4170704(+)__4_4165001_4190001D;SPAN=6020;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:16:4.2:46.2,4.2,0:0:15:-46.21:46.21
4	4170704	215182:2	T	T[4:4164684[	46	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=215182:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4164684(-)-4:4170704(+)__4_4165001_4190001D;SPAN=6020;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:16:4.2:46.2,4.2,0:0:15:-46.21:46.21
4	4357811	215279:1	T	]4:4357945]T	30	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=215279:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_4336501_4361501_98C;SPAN=134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:43:30.8:30.8,0,77:13:0:-30.83:31.94
4	4357945	215279:2	C	C[4:4357811[	30	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=215279:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_4336501_4361501_98C;SPAN=134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:43:30.8:30.8,0,77:13:0:-30.83:31.94
4	6003698	215740:1	G	]4:6004494]G	59	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=215740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:6003698(-)-4:6004494(+)__4_6002501_6027501D;SPAN=796;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:18:5.4:59.4,5.4,0:0:20:-59.41:59.41
4	6004494	215740:2	G	G[4:6003698[	59	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=215740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:6003698(-)-4:6004494(+)__4_6002501_6027501D;SPAN=796;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:18:5.4:59.4,5.4,0:0:20:-59.41:59.41
4	6649866	216000:1	A	A[4:6651184[	46	PASS	EVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=216000:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_6639501_6664501_41C;SPAN=1318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:16:4.2:46.2,4.2,0:14:0:-44.69:44.69
4	6651184	216000:2	C	]4:6649866]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=216000:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_6639501_6664501_41C;SPAN=1318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:16:4.2:46.2,4.2,0:14:0:-44.69:44.69
4	7237365	216212:1	T	T[4:7245647[	28	PASS	EVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=216212:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7227501_7252501_105C;SPAN=8282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
4	7245647	216212:2	T	]4:7237365]T	28	PASS	EVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=216212:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7227501_7252501_105C;SPAN=8282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
4	7633785	216329:1	C	C[4:7634126[	16	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=216329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7619501_7644501_96C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92
4	7634126	216329:2	C	]4:7633785]C	16	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=216329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7619501_7644501_96C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92
4	9455471	216861:1	C	C[4:9479875[	29	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=216861:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:9455471(+)-4:9479875(-)__4_9457001_9482001D;SPAN=24404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
4	9479875	216861:2	A	]4:9455471]A	29	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=216861:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:9455471(+)-4:9479875(-)__4_9457001_9482001D;SPAN=24404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
4	10390921	217253:1	G	G[4:10400557[	85	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=217253:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:10390921(+)-4:10400557(-)__4_10388001_10413001D;SPAN=9636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:7:7.8:85.8,7.8,0:0:28:-85.82:85.82
4	10400557	217253:2	A	]4:10390921]A	85	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=217253:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:10390921(+)-4:10400557(-)__4_10388001_10413001D;SPAN=9636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:7:7.8:85.8,7.8,0:0:28:-85.82:85.82
4	10433876	217260:1	T	T[4:10435083[	7	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=217260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_10412501_10437501_24C;SPAN=1207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:22:7.1:7.1,0,46.7:4:0:-7.02:8.809
4	10435083	217260:2	T	]4:10433876]T	7	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=217260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_10412501_10437501_24C;SPAN=1207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:22:7.1:7.1,0,46.7:4:0:-7.02:8.809
4	11598244	217597:1	A	A[4:11598838[	27	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=217597:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_11588501_11613501_22C;SPAN=594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
4	11598838	217597:2	G	]4:11598244]G	27	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=217597:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_11588501_11613501_22C;SPAN=594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
4	17201142	218948:1	T	T[4:17201444[	62	PASS	EVDNC=ASSMB;HOMSEQ=TATCCTTTT;MAPQ=60;MATEID=218948:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_17199001_17224001_8C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72
4	17201444	218948:2	T	]4:17201142]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TATCCTTTT;MAPQ=60;MATEID=218948:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_17199001_17224001_8C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72
4	18278640	219210:1	G	]4:18409168]G	32	PASS	EVDNC=ASSMB;INSERTION=CAATTTCAAGG;MAPQ=60;MATEID=219210:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_18399501_18424501_13C;SPAN=130528;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
4	18409168	219210:2	A	A[4:18278640[	32	PASS	EVDNC=ASSMB;INSERTION=CAATTTCAAGG;MAPQ=60;MATEID=219210:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_18399501_18424501_13C;SPAN=130528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
4	19077842	219355:1	T	T[4:19083928[	0	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCACTGATTTGCTTT;MAPQ=60;MATEID=219355:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_19061001_19086001_22C;SPAN=6086;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:24:1328:99:0,293.7,3934:9:18:294.1:28.04
4	19083928	219355:2	C	]4:19077842]C	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCACTGATTTGCTTT;MAPQ=60;MATEID=219355:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_19061001_19086001_22C;SPAN=6086;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:24:1328:99:0,293.7,3934:9:18:294.1:28.04
4	19519813	219488:2	A	A[1:103230510[	75	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=ATACATACATATATATGTACATACATACATATATA;INSERTION=TATACGTACATACATACATATATACATACATATATACGTACATACATATATATGTACATACATACATACGTACATACATATATATGTACATACATACATATGTACATACATATATATGTACATACATACATAT;MAPQ=60;MATEID=219488:1;MATENM=4;NM=4;NUMPARTS=5;SCTG=c_4_19502001_19527001_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:5:6.9:75.9,6.9,0:24:5:-75.92:75.92
4	20376222	219768:1	A	]4:20636643]A	59	PASS	EVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=219768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20629001_20654001_8C;SPAN=260421;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41
4	20577538	219744:1	G	G[4:20601956[	33	PASS	EVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=219744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20580001_20605001_25C;SPAN=24418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
4	20601956	219744:2	G	]4:20577538]G	33	PASS	EVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=219744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20580001_20605001_25C;SPAN=24418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
4	20636643	219768:2	C	C[4:20376222[	59	PASS	EVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=219768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20629001_20654001_8C;SPAN=260421;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41
4	21159379	219876:1	A	A[4:21165475[	46	PASS	EVDNC=ASSMB;HOMSEQ=AGAAAATTATACTAAA;MAPQ=60;MATEID=219876:2;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_21143501_21168501_4C;SPAN=6096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:15:0:-46.21:46.21
4	21165475	219876:2	A	]4:21159379]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AGAAAATTATACTAAA;MAPQ=60;MATEID=219876:1;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_21143501_21168501_4C;SPAN=6096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:15:0:-46.21:46.21
4	21714832	768310:1	T	]16:63759379]T	62	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTTA;MAPQ=60;MATEID=768310:2;MATENM=10;NM=0;NUMPARTS=2;SCTG=c_16_63749001_63774001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:16:5.7:62.7,5.7,0:19:2:-62.72:62.72
4	22150365	224489:1	C	C[4:36380534[	38	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=224489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150365(+)-4:36380534(-)__4_36358001_36383001D;SPAN=14230169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
4	22150805	224490:1	A	]4:36381031]A	19	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=224490:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150805(-)-4:36381031(+)__4_36358001_36383001D;SPAN=14230226;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
4	25495543	221013:1	G	G[4:25495842[	32	PASS	EVDNC=ASSMB;HOMSEQ=AAAGACAAGTGACAG;MAPQ=60;MATEID=221013:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_25480001_25505001_129C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
4	25495842	221013:2	A	]4:25495543]A	32	PASS	EVDNC=ASSMB;HOMSEQ=AAAGACAAGTGACAG;MAPQ=60;MATEID=221013:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_25480001_25505001_129C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
4	26526697	221392:1	C	C[4:26526935[	42	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=221392:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_26509001_26534001_27C;SPAN=238;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
4	26526935	221392:2	T	]4:26526697]T	42	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=221392:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_26509001_26534001_27C;SPAN=238;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
4	27069532	221525:1	C	]4:27069662]C	26	PASS	EVDNC=ASSMB;INSERTION=TAAAGACTTTG;MAPQ=60;MATEID=221525:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_27048001_27073001_3C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:12:0:-26.4:28.44
4	27069662	221525:2	C	C[4:27069532[	26	PASS	EVDNC=ASSMB;INSERTION=TAAAGACTTTG;MAPQ=60;MATEID=221525:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_27048001_27073001_3C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:12:0:-26.4:28.44
4	28562678	222110:1	C	C[4:28562989[	56	PASS	EVDNC=ASSMB;HOMSEQ=GAAATGAGTAATAC;MAPQ=60;MATEID=222110:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_28542501_28567501_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:21:2.4:56.1,2.4,0:18:0:-57:57
4	28562989	222110:2	G	]4:28562678]G	56	PASS	EVDNC=ASSMB;HOMSEQ=GAAATGAGTAATAC;MAPQ=60;MATEID=222110:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_28542501_28567501_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:21:2.4:56.1,2.4,0:18:0:-57:57
4	31012329	222850:1	T	T[4:31013351[	29	PASS	EVDNC=ASSMB;HOMSEQ=ATGT;MAPQ=60;MATEID=222850:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_30992501_31017501_9C;SPAN=1022;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
4	31013351	222850:2	A	]4:31012329]A	29	PASS	EVDNC=ASSMB;HOMSEQ=ATGT;MAPQ=60;MATEID=222850:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_30992501_31017501_9C;SPAN=1022;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
4	31405064	223003:1	C	C[4:31405383[	10	PASS	EVDNC=ASSMB;HOMSEQ=ATTATTTTC;MAPQ=60;MATEID=223003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31384501_31409501_18C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:68:10.7:10.7,0,159.2:9:0:-10.59:18.47
4	31405383	223003:2	A	]4:31405064]A	10	PASS	EVDNC=ASSMB;HOMSEQ=ATTATTTTC;MAPQ=60;MATEID=223003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31384501_31409501_18C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:68:10.7:10.7,0,159.2:9:0:-10.59:18.47
4	31840145	223216:1	G	]4:31840263]G	8	PASS	EVDNC=ASSMB;INSERTION=ATCTTT;MAPQ=60;MATEID=223216:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31825501_31850501_67C;SPAN=118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:31:8:8,0,67.4:5:0:-7.791:10.72
4	31840263	223216:2	G	G[4:31840145[	8	PASS	EVDNC=ASSMB;INSERTION=ATCTTT;MAPQ=60;MATEID=223216:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31825501_31850501_67C;SPAN=118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:31:8:8,0,67.4:5:0:-7.791:10.72
4	32103898	223291:1	T	]4:32103993]T	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=223291:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_32095001_32120001_79C;SPAN=95;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8
4	32103993	223291:2	C	C[4:32103898[	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=223291:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_32095001_32120001_79C;SPAN=95;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8
4	32964702	223633:1	T	]4:33012312]T	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCATAT;MAPQ=60;MATEID=223633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33001501_33026501_98C;SPAN=47610;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:5:7:-31.35:31.35
4	33012312	223633:2	T	T[4:32964702[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCATAT;MAPQ=60;MATEID=223633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33001501_33026501_98C;SPAN=47610;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:5:7:-31.35:31.35
4	33471797	223751:1	A	A[4:33472122[	49	PASS	EVDNC=ASSMB;HOMSEQ=AAAATCACTGAAATA;MAPQ=60;MATEID=223751:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33467001_33492001_61C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:16:0:-50.34:50.34
4	33472122	223751:2	A	]4:33471797]A	49	PASS	EVDNC=ASSMB;HOMSEQ=AAAATCACTGAAATA;MAPQ=60;MATEID=223751:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33467001_33492001_61C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:16:0:-50.34:50.34
4	34530009	223925:1	C	C[4:34530329[	49	PASS	EVDNC=ASSMB;HOMSEQ=CAGGCCATTCCTTTC;MAPQ=60;MATEID=223925:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_34520501_34545501_89C;SPAN=320;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51
4	34530329	223925:2	C	]4:34530009]C	49	PASS	EVDNC=ASSMB;HOMSEQ=CAGGCCATTCCTTTC;MAPQ=60;MATEID=223925:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_34520501_34545501_89C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51
4	36380534	224489:2	G	]4:22150365]G	38	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=224489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150365(+)-4:36380534(-)__4_36358001_36383001D;SPAN=14230169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
4	36381031	224490:2	C	C[4:22150805[	19	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=224490:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150805(-)-4:36381031(+)__4_36358001_36383001D;SPAN=14230226;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
4	36841138	224648:1	T	T[4:36841468[	31	PASS	EVDNC=ASSMB;HOMSEQ=TGGATGAATCTTCT;MAPQ=60;MATEID=224648:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_36823501_36848501_12C;SPAN=330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
4	36841468	224648:2	T	]4:36841138]T	31	PASS	EVDNC=ASSMB;HOMSEQ=TGGATGAATCTTCT;MAPQ=60;MATEID=224648:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_36823501_36848501_12C;SPAN=330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19
4	39029470	225324:1	T	T[4:39029739[	26	PASS	EVDNC=ASSMB;HOMSEQ=AAGAACTAATTTTT;MAPQ=60;MATEID=225324:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_39028501_39053501_38C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
4	39029739	225324:2	A	]4:39029470]A	26	PASS	EVDNC=ASSMB;HOMSEQ=AAGAACTAATTTTT;MAPQ=60;MATEID=225324:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_39028501_39053501_38C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09
4	40023395	225782:1	T	T[4:40024660[	49	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=225782:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:40023395(+)-4:40024660(-)__4_40008501_40033501D;SPAN=1265;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51
4	40024660	225782:2	T	]4:40023395]T	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=225782:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:40023395(+)-4:40024660(-)__4_40008501_40033501D;SPAN=1265;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51
4	42903148	226777:1	T	T[4:42903837[	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=226777:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_42899501_42924501_62C;SPAN=689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
4	42903837	226777:2	T	]4:42903148]T	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=226777:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_42899501_42924501_62C;SPAN=689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
4	46200780	227682:1	C	C[4:46203010[	62	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=227682:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_4_46182501_46207501_3C;SPAN=2230;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:21:0:-62.72:62.72
4	46203010	227682:2	T	]4:46200780]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=227682:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_4_46182501_46207501_3C;SPAN=2230;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:21:0:-62.72:62.72
4	49932115	229270:1	T	T[4:51702561[	26	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=229270:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:49932115(+)-4:51702561(-)__4_51695001_51720001D;SPAN=1770446;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	51702561	229270:2	C	]4:49932115]C	26	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=229270:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:49932115(+)-4:51702561(-)__4_51695001_51720001D;SPAN=1770446;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	52081946	229353:1	G	]4:52082092]G	35	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=229353:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_52062501_52087501_37C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
4	52082092	229353:2	A	A[4:52081946[	35	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=229353:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_52062501_52087501_37C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
4	54616269	230068:1	C	C[4:54616574[	32	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAGCTTATTTACC;MAPQ=60;MATEID=230068:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_54610501_54635501_78C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57
4	54616574	230068:2	A	]4:54616269]A	32	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAGCTTATTTACC;MAPQ=60;MATEID=230068:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_54610501_54635501_78C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57
4	54942519	230152:1	A	A[4:54942753[	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAACA;MAPQ=60;MATEID=230152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_54929001_54954001_18C;SPAN=234;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
4	54942753	230152:2	A	]4:54942519]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAACA;MAPQ=60;MATEID=230152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_54929001_54954001_18C;SPAN=234;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
4	55132403	230208:1	T	T[4:55132722[	36	PASS	EVDNC=ASSMB;HOMSEQ=GAGGTTTAGAAAGTTT;MAPQ=60;MATEID=230208:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_55125001_55150001_117C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31
4	55132722	230208:2	G	]4:55132403]G	36	PASS	EVDNC=ASSMB;HOMSEQ=GAGGTTTAGAAAGTTT;MAPQ=60;MATEID=230208:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_55125001_55150001_117C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31
4	57429014	230950:1	G	]4:57429550]G	20	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=GGTTTCACCATGTTGGCCAGG;MAPQ=36;MATEID=230950:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_57428001_57453001_17C;SPAN=536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:4:5:-20.22:20.45
4	57429550	230950:2	G	G[4:57429014[	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTTTCACCATGTTGGCCAGG;MAPQ=60;MATEID=230950:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_57428001_57453001_17C;SPAN=536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:4:5:-20.22:20.45
4	58562833	231342:1	T	]4:58569632]T	74	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=231342:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_19C;SPAN=6799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:40:25.1:74.6,0,25.1:18:17:-75.86:75.86
4	58562834	231343:1	T	T[4:58569374[	48	PASS	EVDNC=ASSMB;HOMSEQ=TTTT;MAPQ=60;MATEID=231343:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_47C;SPAN=6540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46
4	58569374	231343:2	T	]4:58562834]T	48	PASS	EVDNC=ASSMB;HOMSEQ=TTTT;MAPQ=60;MATEID=231343:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_47C;SPAN=6540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46
4	58569632	231342:2	T	T[4:58562833[	74	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=231342:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_19C;SPAN=6799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:40:25.1:74.6,0,25.1:18:17:-75.86:75.86
4	58790074	231475:1	A	]4:58808344]A	42	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=231475:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_58800001_58825001_79C;SPAN=18270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:9:9:-42.71:42.71
4	58808344	231475:2	A	A[4:58790074[	42	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=231475:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_58800001_58825001_79C;SPAN=18270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:9:9:-42.71:42.71
4	59078961	231628:1	T	T[4:59084875[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=231628:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:59078961(+)-4:59084875(-)__4_59069501_59094501D;SPAN=5914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3
4	59084875	231628:2	A	]4:59078961]A	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=231628:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:59078961(+)-4:59084875(-)__4_59069501_59094501D;SPAN=5914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3
4	60231729	697955:1	T	T[14:52425216[	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=697955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_52405501_52430501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29
4	60232158	697967:1	T	]14:52476005]T	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=697967:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_52454501_52479501_37C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:25:22.7:22.7,0,39.2:7:8:-22.68:22.95
4	60450062	232202:1	T	T]4:60454315]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=232202:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:60450062(+)-4:60454315(+)__4_60441501_60466501D;SPAN=4253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:45:23.6:23.6,0,89.6:0:11:-23.66:25.82
4	60454315	232202:2	A	A]4:60450062]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=232202:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:60450062(+)-4:60454315(+)__4_60441501_60466501D;SPAN=4253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:45:23.6:23.6,0,89.6:0:11:-23.66:25.82
4	61073473	232396:1	A	A[4:61076526[	56	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=232396:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_4_61054001_61079001_21C;SPAN=3053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	61076526	232396:2	A	]4:61073473]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=232396:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_4_61054001_61079001_21C;SPAN=3053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	61162594	232429:1	G	G[4:61162877[	50	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=232429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61152001_61177001_22C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:32:27.5:50.6,0,27.5:18:0:-50.7:50.7
4	61162877	232429:2	G	]4:61162594]G	50	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=232429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61152001_61177001_22C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:32:27.5:50.6,0,27.5:18:0:-50.7:50.7
4	61939924	232702:1	T	]9:41047840]T	26	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=14;MATEID=232702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61936001_61961001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:8:5:-26.41:26.41
4	63062069	357378:1	C	[6:101065929[C	69	PASS	DISC_MAPQ=54;EVDNC=ASDIS;INSERTION=TACAAACTCACTGGGAGGAA;MAPQ=60;MATEID=357378:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_6_101062501_101087501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:15:6.3:69.3,6.3,0:22:3:-69.32:69.32
4	63828610	233390:1	G	G[4:63848674[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATTATAAAG;MAPQ=60;MATEID=233390:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_63822501_63847501_57C;SPAN=20064;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:8:3.6:39.6,3.6,0:8:9:-39.61:39.61
4	63848674	233390:2	A	]4:63828610]A	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATTATAAAG;MAPQ=60;MATEID=233390:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_63822501_63847501_57C;SPAN=20064;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:8:3.6:39.6,3.6,0:8:9:-39.61:39.61
4	63917880	233453:1	T	T[4:63918837[	69	PASS	EVDNC=ASSMB;HOMSEQ=AAGGCCAATATCTT;MAPQ=60;MATEID=233453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_63896001_63921001_8C;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:16:6.3:69.3,6.3,0:23:0:-69.32:69.32
4	63918837	233453:2	A	]4:63917880]A	69	PASS	EVDNC=ASSMB;HOMSEQ=AAGGCCAATATCTT;MAPQ=60;MATEID=233453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_63896001_63921001_8C;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:16:6.3:69.3,6.3,0:23:0:-69.32:69.32
4	64748503	233822:1	A	A]4:64749754]	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTGCCTAAATTTAGT;MAPQ=60;MATEID=233822:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_64729001_64754001_3C;SPAN=1251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:13:6:-39.11:39.25
4	64748549	233823:1	T	[4:64749438[T	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=233823:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_64729001_64754001_17C;SPAN=889;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:7:9:-31.74:31.78
4	64749438	233823:2	C	[4:64748549[C	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=233823:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_64729001_64754001_17C;SPAN=889;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:7:9:-31.74:31.78
4	64749754	233822:2	C	C]4:64748503]	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTGCCTAAATTTAGT;MAPQ=60;MATEID=233822:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_64729001_64754001_3C;SPAN=1251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:13:6:-39.11:39.25
4	64856273	233886:1	C	]4:65038861]C	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTTTCTATGGGAAGGCA;MAPQ=60;MATEID=233886:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_65023001_65048001_27C;SPAN=182588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:6:9:-35.78:35.78
4	65038861	233886:2	C	C[4:64856273[	35	PASS	DISC_MAPQ=51;EVDNC=ASDIS;INSERTION=ATTTTCTATGGGAAGGCA;MAPQ=60;MATEID=233886:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_65023001_65048001_27C;SPAN=182588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:6:9:-35.78:35.78
4	65548212	234074:2	T	]2:41825584]T	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=234074:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:41825584(+)-4:65548212(-)__4_65537501_65562501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51
4	65936763	234286:2	G	G]3:139885156]	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GG;MAPQ=60;MATEID=234286:1;MATENM=12;NM=0;NUMPARTS=2;SCTG=c_4_65929501_65954501_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:21:4:-75.92:75.92
4	65937116	988171:1	T	[Un_KN707700v1_decoy:1[T	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_551_1_3703_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:12:0:-36.31:36.31
4	66294124	234423:1	T	T[4:66294902[	27	PASS	EVDNC=ASSMB;HOMSEQ=TAGT;MAPQ=60;MATEID=234423:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_66272501_66297501_19C;SPAN=778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:11:0:-27.6:27.96
4	66294902	234423:2	T	]4:66294124]T	27	PASS	EVDNC=ASSMB;HOMSEQ=TAGT;MAPQ=60;MATEID=234423:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_66272501_66297501_19C;SPAN=778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:11:0:-27.6:27.96
4	69241718	235250:1	T	[4:69308055[T	49	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=235250:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:69241718(-)-4:69308055(-)__4_69237001_69262001D;SPAN=66337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34
4	69308055	235250:2	T	[4:69241718[T	49	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=235250:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:69241718(-)-4:69308055(-)__4_69237001_69262001D;SPAN=66337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34
4	69601740	235472:1	G	G[4:69607085[	46	PASS	EVDNC=ASSMB;INSERTION=CAACCAGCTGGTGCTAAC;MAPQ=60;MATEID=235472:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_69604501_69629501_122C;SPAN=5345;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
4	69607085	235472:2	A	]4:69601740]A	46	PASS	EVDNC=ASSMB;INSERTION=CAACCAGCTGGTGCTAAC;MAPQ=60;MATEID=235472:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_69604501_69629501_122C;SPAN=5345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
4	70009057	235602:1	G	]4:70009155]G	54	PASS	EVDNC=ASSMB;HOMSEQ=GGAAAG;MAPQ=60;MATEID=235602:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_69996501_70021501_59C;SPAN=98;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:53:54.5:54.5,0,77.6:21:0:-54.42:54.67
4	70009155	235602:2	G	G[4:70009057[	54	PASS	EVDNC=ASSMB;HOMSEQ=GGAAAG;MAPQ=60;MATEID=235602:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_69996501_70021501_59C;SPAN=98;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:53:54.5:54.5,0,77.6:21:0:-54.42:54.67
4	70092925	235620:1	A	[Un_JTFH01000105v1_decoy:1[A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=235620:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_70070001_70095001_57C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:14:9.3:102.3,9.3,0:34:0:-102.3:102.3
4	70132919	347771:1	T	T[6:69542551[	29	PASS	EVDNC=ASSMB;HOMSEQ=GCT;MAPQ=60;MATEID=347771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
4	70133000	347773:1	A	]6:69542531]A	20	PASS	EVDNC=ASSMB;HOMSEQ=ATCCCA;MAPQ=60;MATEID=347773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_105C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82
4	70133226	235647:1	C	C[4:70133846[	37	PASS	EVDNC=ASSMB;HOMSEQ=TACCC;MAPQ=60;MATEID=235647:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_70119001_70144001_18C;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:13:0:-38.44:38.44
4	70133846	235647:2	T	]4:70133226]T	37	PASS	EVDNC=ASSMB;HOMSEQ=TACCC;MAPQ=60;MATEID=235647:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_70119001_70144001_18C;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:13:0:-38.44:38.44
4	72234750	236443:1	G	]4:72287710]G	25	PASS	EVDNC=ASSMB;INSERTION=TGTGTGACA;MAPQ=47;MATEID=236443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72275001_72300001_16C;SPAN=52960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:9:0:-26.19:26.19
4	72287710	236443:2	A	A[4:72234750[	25	PASS	EVDNC=ASSMB;INSERTION=TGTGTGACA;MAPQ=60;MATEID=236443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72275001_72300001_16C;SPAN=52960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:9:0:-26.19:26.19
4	72965532	236699:1	A	A[4:72966104[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=59;MATEID=236699:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72961001_72986001_22C;SPAN=572;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69
4	72966104	236699:2	A	]4:72965532]A	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=236699:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72961001_72986001_22C;SPAN=572;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69
4	74717517	237170:1	T	T[4:74723589[	46	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=237170:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:74717517(+)-4:74723589(-)__4_74700501_74725501D;SPAN=6072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21
4	74723589	237170:2	C	]4:74717517]C	46	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=237170:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:74717517(+)-4:74723589(-)__4_74700501_74725501D;SPAN=6072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21
4	76427327	898387:1	A	A[21:18857736[	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=898387:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:76427327(+)-21:18857736(-)__21_18840501_18865501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
4	79284589	238752:1	G	G[4:79284903[	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAATGATTGAGG;MAPQ=60;MATEID=238752:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_79282001_79307001_61C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:20:6:66,6,0:14:10:-66.02:66.02
4	79284903	238752:2	A	]4:79284589]A	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAATGATTGAGG;MAPQ=60;MATEID=238752:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_79282001_79307001_61C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:20:6:66,6,0:14:10:-66.02:66.02
4	79966908	238958:1	G	G[4:79972938[	33	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAGGGCGTCCG;MAPQ=60;MATEID=238958:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_79968001_79993001_85C;SPAN=6030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
4	79972938	238958:2	A	]4:79966908]A	33	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAGGGCGTCCG;MAPQ=60;MATEID=238958:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_79968001_79993001_85C;SPAN=6030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
4	79973439	280936:1	T	T[5:21207604[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=280936:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:79973439(+)-5:21207604(-)__5_21192501_21217501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:36:9.9:108.9,9.9,0:0:34:-108.9:108.9
4	80381385	239062:1	T	T[4:80381712[	73	PASS	EVDNC=ASSMB;HOMSEQ=CATATACATTTTT;MAPQ=60;MATEID=239062:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_80360001_80385001_47C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:32:4.4:73.7,0,4.4:25:0:-76.74:76.74
4	80381712	239062:2	C	]4:80381385]C	73	PASS	EVDNC=ASSMB;HOMSEQ=CATATACATTTTT;MAPQ=60;MATEID=239062:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_80360001_80385001_47C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:32:4.4:73.7,0,4.4:25:0:-76.74:76.74
4	83253876	240056:1	T	]4:83481515]T	17	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=240056:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_83471501_83496501_117C;SPAN=227639;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39
4	83481515	240056:2	T	T[4:83253876[	17	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=240056:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_83471501_83496501_117C;SPAN=227639;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39
4	83695488	243022:1	A	]4:93378383]A	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCTTGT;MAPQ=60;MATEID=243022:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_93369501_93394501_6C;SPAN=9682895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:10:11:-51.41:51.41
4	85643235	240634:1	T	T[4:85643564[	25	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=240634:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_85627501_85652501_117C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:111:25.1:25.1,0,252.8:17:0:-24.92:36.04
4	85643564	240634:2	T	]4:85643235]T	25	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=240634:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_85627501_85652501_117C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:111:25.1:25.1,0,252.8:17:0:-24.92:36.04
4	87347149	241148:1	G	G[4:87353146[	50	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=241148:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87347149(+)-4:87353146(-)__4_87342501_87367501D;SPAN=5997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77
4	87353146	241148:2	C	]4:87347149]C	50	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=241148:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87347149(+)-4:87353146(-)__4_87342501_87367501D;SPAN=5997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77
4	87562748	241261:1	C	C[4:87565161[	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGTTACAAACAAC;MAPQ=60;MATEID=241261:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87563001_87588001_2C;SPAN=2413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:32:8.7:95.7,8.7,0:16:24:-95.72:95.72
4	87565161	241261:2	A	]4:87562748]A	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGTTACAAACAAC;MAPQ=60;MATEID=241261:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87563001_87588001_2C;SPAN=2413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:32:8.7:95.7,8.7,0:16:24:-95.72:95.72
4	87918124	241445:1	T	]4:87922117]T	12	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=241445:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87918124(-)-4:87922117(+)__4_87906001_87931001D;SPAN=3993;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2
4	87922117	241445:2	T	T[4:87918124[	12	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=241445:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87918124(-)-4:87922117(+)__4_87906001_87931001D;SPAN=3993;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2
4	87926012	241456:1	T	[4:87937548[T	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=241456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87930501_87955501_67C;SPAN=11536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:18:7.5:82.5,7.5,0:19:14:-82.52:82.52
4	87937548	241456:2	T	[4:87926012[T	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=241456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87930501_87955501_67C;SPAN=11536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:18:7.5:82.5,7.5,0:19:14:-82.52:82.52
4	87999639	241468:1	A	A[4:88000093[	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAA;MAPQ=60;MATEID=241468:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_87979501_88004501_147C;SPAN=454;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
4	88000093	241468:2	A	]4:87999639]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAA;MAPQ=60;MATEID=241468:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_87979501_88004501_147C;SPAN=454;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
4	88171507	241535:1	A	A[Un_KN707742v1_decoy:1[	26	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=241535:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_88151001_88176001_126C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69
4	88760322	241695:1	T	T[4:88760632[	27	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATGCCAAGT;MAPQ=60;MATEID=241695:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_88739001_88764001_2C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
4	88760632	241695:2	A	]4:88760322]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATGCCAAGT;MAPQ=60;MATEID=241695:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_88739001_88764001_2C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
4	89152989	242554:1	A	[4:91298139[A	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGT;MAPQ=60;MATEID=242554:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_23C;SPAN=2145150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:10:6:-40.63:40.63
4	89522258	242557:1	A	A[4:91297454[	35	PASS	EVDNC=ASSMB;INSERTION=GTTT;MAPQ=60;MATEID=242557:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_35C;SPAN=1775196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
4	90179639	242218:1	T	]4:90205868]T	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=242218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90184501_90209501_34C;SPAN=26229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
4	90205868	242218:2	T	T[4:90179639[	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=242218:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90184501_90209501_34C;SPAN=26229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32
4	90473715	242279:1	C	C[4:90478988[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=242279:2;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CTCTCT;SCTG=c_4_90478501_90503501_31C;SECONDARY;SPAN=5273;SUBN=9;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:4.2:19.8,0,4.2:1:9:-20.4:20.4
4	90478988	242279:2	C	]4:90473715]C	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=0;MATEID=242279:1;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CTCTCT;SCTG=c_4_90478501_90503501_31C;SECONDARY;SPAN=5273;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:4.2:19.8,0,4.2:1:9:-20.4:20.4
4	90570520	242324:1	A	A[4:90744228[	36	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242324:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_4_90723501_90748501_0C;SPAN=173708;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:2:3.3:36.3,3.3,0:12:0:-36.31:36.31
4	90635828	242338:1	C	C[4:90816456[	39	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=242338:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90797001_90822001_26C;SPAN=180628;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:15:0.9:39.6,0.9,0:13:0:-41.34:41.34
4	90675647	242318:1	T	T[4:90681758[	22	PASS	EVDNC=ASSMB;HOMSEQ=GTGTTTTTATCTT;MAPQ=60;MATEID=242318:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_4_90674501_90699501_16C;SPAN=6111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
4	90681758	242318:2	G	]4:90675647]G	22	PASS	EVDNC=ASSMB;HOMSEQ=GTGTTTTTATCTT;MAPQ=60;MATEID=242318:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_4_90674501_90699501_16C;SPAN=6111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
4	90685271	242386:1	C	C[4:90934883[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAC;MAPQ=60;MATEID=242386:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90919501_90944501_46C;SPAN=249612;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:11:10:-46.21:46.21
4	90744228	242324:2	A	]4:90570520]A	36	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242324:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_4_90723501_90748501_0C;SPAN=173708;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:2:3.3:36.3,3.3,0:12:0:-36.31:36.31
4	90816456	242338:2	C	]4:90635828]C	39	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=242338:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90797001_90822001_26C;SPAN=180628;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:15:0.9:39.6,0.9,0:13:0:-41.34:41.34
4	90834186	242353:1	C	C[4:90834716[	16	PASS	EVDNC=ASSMB;INSERTION=TATTTTCCTTCCTAGTAC;MAPQ=60;MATEID=242353:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90821501_90846501_42C;SPAN=530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
4	90834716	242353:2	T	]4:90834186]T	16	PASS	EVDNC=ASSMB;INSERTION=TATTTTCCTTCCTAGTAC;MAPQ=60;MATEID=242353:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90821501_90846501_42C;SPAN=530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07
4	90836102	242387:1	T	T[4:90927944[	29	PASS	EVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=242387:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90919501_90944501_12C;SPAN=91842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	90927944	242387:2	T	]4:90836102]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=242387:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90919501_90944501_12C;SPAN=91842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	90934883	242386:2	A	]4:90685271]A	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAC;MAPQ=60;MATEID=242386:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90919501_90944501_46C;SPAN=249612;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:11:10:-46.21:46.21
4	90997734	242586:1	G	G[4:91373474[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=242586:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_91360501_91385501_11C;SPAN=375740;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:11:9:-42.24:42.24
4	91010406	242436:1	A	A[4:91014686[	32	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242436:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90993001_91018001_49C;SPAN=4280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57
4	91014686	242436:2	A	]4:91010406]A	32	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242436:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90993001_91018001_49C;SPAN=4280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57
4	91092356	242516:1	T	T[4:91226523[	39	PASS	EVDNC=ASSMB;HOMSEQ=CATGT;MAPQ=60;MATEID=242516:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91213501_91238501_7C;SPAN=134167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41
4	91154925	242510:1	C	C[4:91191964[	82	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=59;MATEID=242510:2;MATENM=8;NM=3;NUMPARTS=2;SCTG=c_4_91189001_91214001_1C;SPAN=37039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:6:7.5:82.5,7.5,0:27:0:-82.52:82.52
4	91191964	242510:2	C	]4:91154925]C	82	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=59;MATEID=242510:1;MATENM=3;NM=8;NUMPARTS=2;SCTG=c_4_91189001_91214001_1C;SPAN=37039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:6:7.5:82.5,7.5,0:27:0:-82.52:82.52
4	91226523	242516:2	C	]4:91092356]C	39	PASS	EVDNC=ASSMB;HOMSEQ=CATGT;MAPQ=60;MATEID=242516:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91213501_91238501_7C;SPAN=134167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41
4	91297454	242557:2	A	]4:89522258]A	35	PASS	EVDNC=ASSMB;INSERTION=GTTT;MAPQ=60;MATEID=242557:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_35C;SPAN=1775196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39
4	91298139	242554:2	A	[4:89152989[A	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGT;MAPQ=60;MATEID=242554:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_23C;SPAN=2145150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:10:6:-40.63:40.63
4	91298270	242563:1	A	A]4:91298737]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=242563:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:91298270(+)-4:91298737(+)__4_91287001_91312001D;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:33:23.9:23.9,0,56.9:0:10:-23.73:24.58
4	91298737	242563:2	C	C]4:91298270]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=242563:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:91298270(+)-4:91298737(+)__4_91287001_91312001D;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:33:23.9:23.9,0,56.9:0:10:-23.73:24.58
4	91373474	242586:2	T	]4:90997734]T	41	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=242586:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_91360501_91385501_11C;SPAN=375740;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:11:9:-42.24:42.24
4	91668387	242661:1	A	]4:132470810]A	25	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=242661:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_91654501_91679501_22C;SPAN=40802423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:9:3:-25.7:25.87
4	92646207	242852:1	T	]Un_JTFH01000254v1_decoy:397]T	89	PASS	EVDNC=ASSMB;HOMSEQ=TTTCT;MAPQ=60;MATEID=242852:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_92634501_92659501_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89
4	92647307	242855:1	G	G[Un_JTFH01000254v1_decoy:1952[	95	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=242855:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_92634501_92659501_1C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:22:8.7:95.7,8.7,0:32:0:-95.72:95.72
4	93189624	242967:1	T	T[4:93191584[	32	PASS	EVDNC=ASSMB;INSERTION=ATCAAATATCAAAAATCATATATCAAATATCATATATTCAAATATCACTTAGTGA;MAPQ=60;MATEID=242967:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_93173501_93198501_25C;SPAN=1960;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:38:32.3:32.3,0,62:13:0:-32.23:32.79
4	93191584	242967:2	T	]4:93189624]T	32	PASS	EVDNC=ASSMB;INSERTION=ATCAAATATCAAAAATCATATATCAAATATCATATATTCAAATATCACTTAGTGA;MAPQ=60;MATEID=242967:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_93173501_93198501_25C;SPAN=1960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:38:32.3:32.3,0,62:13:0:-32.23:32.79
4	93378383	243022:2	T	T[4:83695488[	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCTTGT;MAPQ=60;MATEID=243022:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_93369501_93394501_6C;SPAN=9682895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:10:11:-51.41:51.41
4	93638303	243080:1	T	T[4:93644340[	29	PASS	EVDNC=ASSMB;HOMSEQ=TAAAACTTGCATCTT;MAPQ=60;MATEID=243080:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_93639001_93664001_46C;SPAN=6037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
4	93644340	243080:2	T	]4:93638303]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TAAAACTTGCATCTT;MAPQ=60;MATEID=243080:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_93639001_93664001_46C;SPAN=6037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
4	94597407	390417:1	T	]7:46865077]T	89	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TTTTTTTTTTTT;MAPQ=60;MATEID=390417:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_64C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:36:0:89.1,0,0:10:25:-94.04:94.04
4	94597595	390418:1	C	C[7:46865061[	99	PASS	EVDNC=ASSMB;HOMSEQ=GAAGCC;MAPQ=60;MATEID=390418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_107C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:30:11.1:122.1,11.1,0:40:0:-122.1:122.1
4	94716594	243382:1	T	T[4:94717511[	56	PASS	EVDNC=ASSMB;HOMSEQ=ATTTT;MAPQ=60;MATEID=243382:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_94717001_94742001_52C;SPAN=917;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	94717511	243382:2	A	]4:94716594]A	56	PASS	EVDNC=ASSMB;HOMSEQ=ATTTT;MAPQ=60;MATEID=243382:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_94717001_94742001_52C;SPAN=917;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	94949314	243471:1	T	T[4:94949616[	11	PASS	EVDNC=ASSMB;HOMSEQ=TGAACTCATTCTTTTTT;MAPQ=60;MATEID=243471:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_94937501_94962501_90C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59
4	94949616	243471:2	T	]4:94949314]T	11	PASS	EVDNC=ASSMB;HOMSEQ=TGAACTCATTCTTTTTT;MAPQ=60;MATEID=243471:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_94937501_94962501_90C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59
4	97127128	245757:1	C	]4:103789730]C	28	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=245757:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103782001_103807001_54C;SPAN=6662602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
4	97127269	483259:1	A	A[9:584229[	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=483259:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:6:5:-30.15:30.15
4	100380547	161281:2	A	]3:47825187]A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=161281:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:47825187(+)-4:100380547(-)__3_47824001_47849001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	100603230	161208:2	C	C[3:47737029[	32	PASS	EVDNC=ASSMB;HOMSEQ=ACC;MAPQ=60;MATEID=161208:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_47726001_47751001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
4	100830780	245066:1	C	C[4:100831103[	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=245066:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_100817501_100842501_163C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:11:4:-38.44:38.44
4	100831103	245066:2	G	]4:100830780]G	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=245066:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_100817501_100842501_163C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:11:4:-38.44:38.44
4	102408341	245468:1	T	T[4:102410994[	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=245468:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:102408341(+)-4:102410994(-)__4_102410001_102435001D;SPAN=2653;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:11:3:33,3,0:0:10:-32.46:32.46
4	102410994	245468:2	C	]4:102408341]C	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=245468:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:102408341(+)-4:102410994(-)__4_102410001_102435001D;SPAN=2653;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:11:3:33,3,0:0:10:-32.46:32.46
4	103789730	245757:2	A	A[4:97127128[	28	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=245757:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103782001_103807001_54C;SPAN=6662602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
4	103972889	245845:1	G	G[4:103973524[	42	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=245845:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103953501_103978501_3C;SPAN=635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9
4	103973524	245845:2	T	]4:103972889]T	42	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=245845:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103953501_103978501_3C;SPAN=635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9
4	105316751	246193:1	G	G[4:105317024[	85	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=246193:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_105301001_105326001_127C;SPAN=273;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
4	105317024	246193:2	A	]4:105316751]A	85	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=246193:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_105301001_105326001_127C;SPAN=273;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
4	105671656	476702:1	A	]8:129429764]A	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=476702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_125C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:30:17.9:57.5,0,17.9:13:9:-58.74:58.74
4	105671811	489643:1	T	T]9:30288439]	56	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=ATGT;MAPQ=60;MATEID=489643:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_56C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:10:5.1:56.1,5.1,0:14:5:-56.11:56.11
4	105905762	246472:1	T	]4:106155800]T	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=246472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_24C;SPAN=250038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:25:0.3:62.7,0.3,0:17:11:-66.01:66.01
4	106135421	246475:1	C	C[4:106142206[	99	PASS	EVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=246475:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_1C;SPAN=6785;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:43:1.1:106.7,0,1.1:36:0:-113:113
4	106142206	246475:2	A	]4:106135421]A	99	PASS	EVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=246475:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_1C;SPAN=6785;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:43:1.1:106.7,0,1.1:36:0:-113:113
4	106155800	246472:2	G	G[4:105905762[	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=246472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_24C;SPAN=250038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:25:0.3:62.7,0.3,0:17:11:-66.01:66.01
4	106683143	246663:1	A	A[4:106688097[	34	PASS	EVDNC=ASSMB;HOMSEQ=AATA;MAPQ=60;MATEID=246663:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_106673001_106698001_2C;SPAN=4954;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
4	106688097	246663:2	A	]4:106683143]A	34	PASS	EVDNC=ASSMB;HOMSEQ=AATA;MAPQ=60;MATEID=246663:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_106673001_106698001_2C;SPAN=4954;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
4	107206671	246762:1	T	T[4:107210558[	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAACATTAGGATTCTCTTT;MAPQ=60;MATEID=246762:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_4_107187501_107212501_28C;SPAN=3887;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:16:7.2:79.2,7.2,0:26:0:-79.22:79.22
4	107210558	246762:2	A	]4:107206671]A	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAACATTAGGATTCTCTTT;MAPQ=60;MATEID=246762:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_4_107187501_107212501_28C;SPAN=3887;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:16:7.2:79.2,7.2,0:26:0:-79.22:79.22
4	107355664	246824:1	C	C[4:107358347[	52	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=246824:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:107355664(+)-4:107358347(-)__4_107334501_107359501D;SPAN=2683;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:38:42.2:52.1,0,42.2:0:19:-52.08:52.08
4	107358347	246824:2	A	]4:107355664]A	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=246824:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:107355664(+)-4:107358347(-)__4_107334501_107359501D;SPAN=2683;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:38:42.2:52.1,0,42.2:0:19:-52.08:52.08
4	108186534	247086:1	T	T[4:108186820[	39	PASS	EVDNC=ASSMB;HOMSEQ=AATGTTTGTATTTTTT;MAPQ=60;MATEID=247086:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_108167501_108192501_68C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39
4	108186820	247086:2	A	]4:108186534]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AATGTTTGTATTTTTT;MAPQ=60;MATEID=247086:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_108167501_108192501_68C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39
4	109577601	247504:1	T	T[4:109577910[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGTACTTGAATTCTTT;MAPQ=60;MATEID=247504:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_109564001_109589001_83C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:25:9:99,9,0:23:12:-99.02:99.02
4	109577910	247504:2	G	]4:109577601]G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGTACTTGAATTCTTT;MAPQ=60;MATEID=247504:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_109564001_109589001_83C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:25:9:99,9,0:23:12:-99.02:99.02
4	111438522	468851:1	C	]8:108770582]C	15	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=468851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:111438522(-)-8:108770582(+)__8_108755501_108780501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:0:9:-15.65:19.78
4	111533683	248239:1	T	]4:111641927]T	24	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=248239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_111622001_111647001_72C;SPAN=108244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:10:0:-24.86:25.27
4	111641927	248239:2	T	T[4:111533683[	24	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=248239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_111622001_111647001_72C;SPAN=108244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:10:0:-24.86:25.27
4	112548833	248540:1	G	G[4:112549126[	34	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGTAAAGATG;MAPQ=60;MATEID=248540:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_112528501_112553501_80C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76
4	112549126	248540:2	A	]4:112548833]A	34	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGTAAAGATG;MAPQ=60;MATEID=248540:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_112528501_112553501_80C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76
4	113213952	248806:1	T	T[4:113214422[	41	PASS	EVDNC=ASSMB;HOMSEQ=CAAAATGCTGTTTTAT;MAPQ=60;MATEID=248806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_113190001_113215001_103C;SPAN=470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:15:0:-41.77:41.77
4	113214422	248806:2	C	]4:113213952]C	41	PASS	EVDNC=ASSMB;HOMSEQ=CAAAATGCTGTTTTAT;MAPQ=60;MATEID=248806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_113190001_113215001_103C;SPAN=470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:28:28.4:41.6,0,28.4:15:0:-41.77:41.77
4	113796061	252066:1	G	]4:124022062]G	52	PASS	DISC_MAPQ=24;EVDNC=ASDIS;MAPQ=54;MATEID=252066:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_124019001_124044001_132C;SPAN=10226001;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:11:8:-51.41:51.41
4	113846014	248969:1	G	G]8:91873626]	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=248969:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_113827001_113852001_31C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:7:4:-20.43:21.63
4	113846014	261406:1	G	G[4:151810203[	39	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=GG;INSERTION=GGTTTTCTAGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTCTTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCGTAATTGCCCTGGCCAGAACTTC;MAPQ=60;MATEID=261406:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151802001_151827001_73C;SPAN=37964189;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:11:3:-39.77:39.77
4	114253972	249114:1	A	A[4:114262680[	92	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=249114:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_114243501_114268501_14C;SPAN=8708;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42
4	114262680	249114:2	A	]4:114253972]A	92	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=249114:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_114243501_114268501_14C;SPAN=8708;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42
4	116186292	271163:1	G	G[4:188802177[	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=271163:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_188797001_188822001_5C;SPAN=72615885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:3:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	116655850	260549:1	A	[4:149264903[A	32	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=260549:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116655850(-)-4:149264903(-)__4_149254001_149279001D;SPAN=32609053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59
4	116722508	464088:1	A	]8:96174456]A	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=464088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_12C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:10:11:-45.23:45.23
4	116723100	249870:1	T	T]4:124757819]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=249870:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116723100(+)-4:124757819(+)__4_116718001_116743001D;SPAN=8034719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
4	116923084	13030:2	T	]1:53954398]T	0	PASS	EVDNC=ASSMB;HOMSEQ=TATTTCAT;MAPQ=60;MATEID=13030:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_53949001_53974001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:98:4.2:0,4.2,254.1:7:0:4.44:12.39
4	117217096	485469:1	T	]9:10098711]T	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=485469:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:117217096(-)-9:10098711(+)__9_10094001_10119001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
4	117217097	258447:1	A	[4:142696557[A	25	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=258447:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_4_142688001_142713001_26C;SPAN=25479460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:9:2:-25.14:25.46
4	117766935	250231:1	T	T[4:117767341[	15	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=250231:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_117747001_117772001_1C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51
4	117767341	250231:2	T	]4:117766935]T	15	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=250231:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_117747001_117772001_1C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51
4	118375200	250416:1	T	T[4:118375524[	0	PASS	EVDNC=ASSMB;HOMSEQ=GTCTTTCATTGTT;MAPQ=60;MATEID=250416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_118359501_118384501_43C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:187:9.4:0,9.4,488.5:13:0:9.651:22.85
4	118375524	250416:2	G	]4:118375200]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GTCTTTCATTGTT;MAPQ=60;MATEID=250416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_118359501_118384501_43C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:187:9.4:0,9.4,488.5:13:0:9.651:22.85
4	119096097	250629:1	A	A[4:119096401[	75	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATGCTGCAATGA;MAPQ=60;MATEID=250629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_15C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:25:0:-75.92:75.92
4	119096401	250629:2	A	]4:119096097]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATGCTGCAATGA;MAPQ=60;MATEID=250629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_15C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:25:0:-75.92:75.92
4	119106089	250638:1	T	T[4:119106426[	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AT;MAPQ=60;MATEID=250638:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_94C;SPAN=337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:19:6.6:72.6,6.6,0:21:7:-72.62:72.62
4	119106426	250638:2	G	]4:119106089]G	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AT;MAPQ=60;MATEID=250638:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_94C;SPAN=337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:19:6.6:72.6,6.6,0:21:7:-72.62:72.62
4	120165938	250909:1	A	A[4:120166138[	20	PASS	EVDNC=ASSMB;HOMSEQ=AGCAGA;MAPQ=60;MATEID=250909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120148001_120173001_66C;SPAN=200;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45
4	120166138	250909:2	A	]4:120165938]A	20	PASS	EVDNC=ASSMB;HOMSEQ=AGCAGA;MAPQ=60;MATEID=250909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120148001_120173001_66C;SPAN=200;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45
4	120167449	250918:1	A	]4:120175328]A	19	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=250918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120172501_120197501_1C;SPAN=7879;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:13:12.8:19.4,0,12.8:7:0:-19.51:19.51
4	120175328	250918:2	T	T[4:120167449[	19	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=250918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120172501_120197501_1C;SPAN=7879;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:13:12.8:19.4,0,12.8:7:0:-19.51:19.51
4	120887787	251139:1	T	T[4:120888092[	27	PASS	EVDNC=ASSMB;HOMSEQ=GACATTTTATCCT;MAPQ=60;MATEID=251139:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_120883001_120908001_97C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
4	120888092	251139:2	G	]4:120887787]G	27	PASS	EVDNC=ASSMB;HOMSEQ=GACATTTTATCCT;MAPQ=60;MATEID=251139:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_120883001_120908001_97C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
4	122720683	469240:1	A	]8:109517001]A	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=469240:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109515001_109540001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:53:28.1:28.1,0,104:13:0:-28.02:30.54
4	122721082	262618:1	A	A[4:155292496[	34	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=262618:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_83C;SPAN=32571414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
4	123908850	252028:1	A	]4:123909098]A	19	PASS	EVDNC=ASSMB;INSERTION=CAGTGGCAATTC;MAPQ=60;MATEID=252028:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_123896501_123921501_67C;SPAN=248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:49:19.4:19.4,0,101.9:10:0:-19.24:22.58
4	123909098	252028:2	C	C[4:123908850[	19	PASS	EVDNC=ASSMB;INSERTION=CAGTGGCAATTC;MAPQ=60;MATEID=252028:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_123896501_123921501_67C;SPAN=248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:49:19.4:19.4,0,101.9:10:0:-19.24:22.58
4	124019638	459008:1	A	]8:78595007]A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=459008:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_78571501_78596501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:12:8:-48.04:48.04
4	124022062	252066:2	T	T[4:113796061[	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=252066:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_132C;SPAN=10226001;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:11:8:-51.41:51.41
4	124022412	252074:1	T	T[4:124024032[	56	PASS	EVDNC=ASSMB;HOMSEQ=CATTACATACTTTAT;MAPQ=60;MATEID=252074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_143C;SPAN=1620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
4	124024032	252074:2	C	]4:124022412]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CATTACATACTTTAT;MAPQ=60;MATEID=252074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_143C;SPAN=1620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
4	124756824	257428:1	C	[4:139693884[C	82	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AGGA;INSERTION=ACTCTTGTCCTTATTATTTCAGCTTGGCTAAAAGCCGTATTCCTTGTATGCTTTTATTGTTTTTCTGGTTCAACAAC;MAPQ=60;MATEID=257428:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_139674501_139699501_7C;SPAN=14937060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:27:7.5:82.5,7.5,0:22:6:-81.99:81.99
4	124756824	489646:1	C	[9:30288228[C	34	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AGGA;INSERTION=AAC;MAPQ=60;MATEID=489646:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=CAACAA;SCTG=c_9_30282001_30307001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:11.3:34.7,0,11.3:16:2:-35.31:35.31
4	124757819	249870:2	A	A]4:116723100]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=249870:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116723100(+)-4:124757819(+)__4_116718001_116743001D;SPAN=8034719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
4	124870323	252421:1	C	]4:125017418]C	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=252421:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_124999001_125024001_5C;SPAN=147095;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:10:9:-39.77:39.77
4	125017418	252421:2	C	C[4:124870323[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=252421:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_124999001_125024001_5C;SPAN=147095;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:10:9:-39.77:39.77
4	126064282	476707:1	T	[8:129429474[T	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=476707:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_74C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:13:3:-39.96:39.98
4	127522065	254786:1	T	]4:132470810]T	41	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=T;INSERTION=AGAGTTACAGCATGAGAATTGCATAAACATTGCAAATGCAAAGAAGGACATGTTATTTGCTCCAAGATAGCAGAGATTTCTCCTAGCA;MAPQ=60;MATEID=254786:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_132447001_132472001_15C;SPAN=4948745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
4	127522207	475363:1	T	T[8:126114017[	20	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=475363:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126101501_126126501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
4	127800198	261761:1	C	[4:152998534[C	62	PASS	DISC_MAPQ=52;EVDNC=ASDIS;INSERTION=TTAATTAA;MAPQ=60;MATEID=261761:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_152978001_153003001_10C;SPAN=25198336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:13:11:-61.54:61.54
4	129984083	254011:1	A	]4:130048236]A	27	PASS	EVDNC=ASSMB;INSERTION=TGTTGGAAAAAAT;MAPQ=60;MATEID=254011:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130046001_130071001_25C;SPAN=64153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
4	130048236	254011:2	G	G[4:129984083[	27	PASS	EVDNC=ASSMB;INSERTION=TGTTGGAAAAAAT;MAPQ=48;MATEID=254011:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130046001_130071001_25C;SPAN=64153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
4	130410267	600538:1	A	]11:86686540]A	30	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=600538:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:130410267(-)-11:86686540(+)__11_86681001_86706001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:0:11:-30.15:30.15
4	130736338	254250:1	A	]4:130736502]A	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=254250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130732001_130757001_16C;SPAN=164;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77
4	130736502	254250:2	A	A[4:130736338[	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=254250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130732001_130757001_16C;SPAN=164;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77
4	132259629	254724:1	T	T[4:132261800[	56	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=254724:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:132259629(+)-4:132261800(-)__4_132251001_132276001D;SPAN=2171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
4	132261800	254724:2	G	]4:132259629]G	56	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=254724:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:132259629(+)-4:132261800(-)__4_132251001_132276001D;SPAN=2171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
4	132470632	259250:1	A	[4:145607336[A	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTAACCCAGACTA;MAPQ=60;MATEID=259250:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_145603501_145628501_39C;SPAN=13136704;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:7:6:-34.76:34.76
4	132470810	254786:2	A	A[4:127522065[	41	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=T;INSERTION=AGAGTTACAGCATGAGAATTGCATAAACATTGCAAATGCAAAGAAGGACATGTTATTTGCTCCAAGATAGCAGAGATTTCTCCTAGCA;MAPQ=60;MATEID=254786:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_132447001_132472001_15C;SPAN=4948745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
4	132470810	242661:2	A	A[4:91668387[	25	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=242661:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_91654501_91679501_22C;SPAN=40802423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:9:3:-25.7:25.87
4	132524277	254804:1	A	A[4:132524547[	49	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=254804:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_132520501_132545501_115C;SPAN=270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:17:0:-51.34:51.34
4	132524547	254804:2	A	]4:132524277]A	49	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=254804:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_132520501_132545501_115C;SPAN=270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:17:0:-51.34:51.34
4	132747922	261326:1	C	[4:151538082[C	67	PASS	DISC_MAPQ=57;EVDNC=TSI_G;HOMSEQ=AG;INSERTION=TGGGAAGCAGGGAATTGCTGCTGGAAAGACAACCAGATCATGTCTGCCATAGTGCTCAAAGAAAAATAATTTTAAAGTTACAGAAA;MAPQ=60;MATEID=261326:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151532501_151557501_28C;SPAN=18790160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:30:8:67.4,0,8:16:10:-70.2:70.2
4	133109854	255045:1	T	]4:133181023]T	34	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=255045:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133157501_133182501_52C;SPAN=71169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
4	133181023	255045:2	T	T[4:133109854[	34	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=255045:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133157501_133182501_52C;SPAN=71169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
4	133374405	255133:1	T	T[4:133374709[	59	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATTTGTATTTTTT;MAPQ=60;MATEID=255133:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133353501_133378501_4C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34
4	133374709	255133:2	A	]4:133374405]A	59	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATTTGTATTTTTT;MAPQ=60;MATEID=255133:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133353501_133378501_4C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34
4	133589596	480393:1	C	[8:138632595[C	17	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=480393:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_138621001_138646001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:6:3:-17.41:18.87
4	133589882	255192:1	G	G]6:35915816]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=255192:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:133589882(+)-6:35915816(+)__4_133574001_133599001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
4	134233891	255396:1	A	[4:134237140[A	52	PASS	DISC_MAPQ=44;EVDNC=ASDIS;INSERTION=ACTTTATACAAATGGAGAA;MAPQ=60;MATEID=255396:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_134235501_134260501_0C;SPAN=3249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:14:9:-53.39:53.39
4	134237140	255396:2	T	[4:134233891[T	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACTTTATACAAATGGAGAA;MAPQ=60;MATEID=255396:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_134235501_134260501_0C;SPAN=3249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:14:9:-53.39:53.39
4	134345929	255721:1	G	]4:134988026]G	16	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=255721:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134970501_134995501_166C;SPAN=642097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92
4	134511847	255539:1	A	A[4:134514547[	44	PASS	EVDNC=ASSMB;INSERTION=GTACA;MAPQ=60;MATEID=255539:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134505001_134530001_17C;SPAN=2700;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:40:44.9:44.9,0,54.8:17:0:-44.87:44.94
4	134514547	255539:2	T	]4:134511847]T	44	PASS	EVDNC=ASSMB;INSERTION=GTACA;MAPQ=60;MATEID=255539:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134505001_134530001_17C;SPAN=2700;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:40:44.9:44.9,0,54.8:17:0:-44.87:44.94
4	134969975	259711:1	G	[4:147282100[G	46	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=AATGAG;MAPQ=60;MATEID=259711:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_147269501_147294501_1C;SPAN=12312125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:9:12:-46.99:46.99
4	134988026	255721:2	G	G[4:134345929[	16	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=255721:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134970501_134995501_166C;SPAN=642097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92
4	135006396	255745:1	G	G[4:135006703[	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTGCTATACAG;MAPQ=60;MATEID=255745:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134995001_135020001_94C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:32:2.1:82.5,2.1,0:27:0:-85.01:85.01
4	135006703	255745:2	A	]4:135006396]A	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTGCTATACAG;MAPQ=60;MATEID=255745:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134995001_135020001_94C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:32:2.1:82.5,2.1,0:27:0:-85.01:85.01
4	135169406	505978:1	T	[9:94543397[T	22	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=505978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:135169406(-)-9:94543397(-)__9_94521001_94546001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
4	135304935	692387:1	A	A[14:37047457[	21	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=692387:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37044001_37069001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
4	137443236	262665:1	A	[4:155418929[A	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=262665:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155403501_155428501_47C;SPAN=17975693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:6:2:-17.77:17.94
4	138045057	256843:1	G	G[4:138046065[	99	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=256843:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_4_138033001_138058001_16C;SPAN=1008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:24:13.2:145.2,13.2,0:48:0:-145.2:145.2
4	138046065	256843:2	A	]4:138045057]A	99	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=256843:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_4_138033001_138058001_16C;SPAN=1008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:24:13.2:145.2,13.2,0:48:0:-145.2:145.2
4	138547813	257017:1	A	A[4:138552061[	61	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=257017:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:138547813(+)-4:138552061(-)__4_138547501_138572501D;SPAN=4248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:263:61.6:61.6,0,599.6:0:41:-61.41:87.27
4	138552061	257017:2	A	]4:138547813]A	61	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=257017:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:138547813(+)-4:138552061(-)__4_138547501_138572501D;SPAN=4248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:263:61.6:61.6,0,599.6:0:41:-61.41:87.27
4	139693884	257428:2	T	[4:124756824[T	82	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AGGA;INSERTION=ACTCTTGTCCTTATTATTTCAGCTTGGCTAAAAGCCGTATTCCTTGTATGCTTTTATTGTTTTTCTGGTTCAACAAC;MAPQ=60;MATEID=257428:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_139674501_139699501_7C;SPAN=14937060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:27:7.5:82.5,7.5,0:22:6:-81.99:81.99
4	139694008	464091:1	A	A[8:96173027[	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=464091:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_54C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06
4	139733131	477489:1	G	]8:131152906]G	31	PASS	EVDNC=ASSMB;INSERTION=ATCTGCATTTTT;MAPQ=60;MATEID=477489:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131148501_131173501_29C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
4	139735224	257457:1	T	T[4:153212136[	23	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=257457:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139723501_139748501_83C;SPAN=13476912;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
4	139854667	257492:1	C	]4:139854797]C	23	PASS	EVDNC=ASSMB;INSERTION=GCTCTC;MAPQ=60;MATEID=257492:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139846001_139871001_88C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18
4	139854797	257492:2	C	C[4:139854667[	23	PASS	EVDNC=ASSMB;INSERTION=GCTCTC;MAPQ=60;MATEID=257492:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139846001_139871001_88C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18
4	140519225	257763:1	C	C[4:140520652[	31	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=257763:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:140519225(+)-4:140520652(-)__4_140507501_140532501D;SPAN=1427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:0:12:-30.9:31.08
4	140520652	257763:2	A	]4:140519225]A	31	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=257763:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:140519225(+)-4:140520652(-)__4_140507501_140532501D;SPAN=1427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:0:12:-30.9:31.08
4	141260745	479452:1	G	]8:136646564]G	24	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=479452:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_40C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:8:5:-24.86:25.27
4	141260902	464688:1	T	T]8:98214711]	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AA;MAPQ=60;MATEID=464688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_98196001_98221001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:9:2:-27.11:27.11
4	141309629	258016:1	C	C[4:141311909[	60	PASS	EVDNC=ASSMB;HOMSEQ=GAGCC;MAPQ=60;MATEID=258016:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_141291501_141316501_90C;SPAN=2280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
4	141311909	258016:2	G	]4:141309629]G	60	PASS	EVDNC=ASSMB;HOMSEQ=GAGCC;MAPQ=60;MATEID=258016:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_141291501_141316501_90C;SPAN=2280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
4	141316353	262006:1	T	T[4:153664092[	23	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=262006:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_153664001_153689001_70C;SPAN=12347739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
4	142164895	258336:1	T	]4:142303352]T	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=258336:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_142296001_142321001_119C;SPAN=138457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:11:10:-40.81:40.81
4	142231121	258349:1	C	]4:142332597]C	26	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=258349:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_142320501_142345501_26C;SPAN=101476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83
4	142303352	258336:2	T	T[4:142164895[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=258336:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_142296001_142321001_119C;SPAN=138457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:11:10:-40.81:40.81
4	142332597	258349:2	A	A[4:142231121[	26	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=258349:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_142320501_142345501_26C;SPAN=101476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83
4	142696529	479453:1	C	[8:136645913[C	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=479453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:2:-26.26:26.32
4	142696557	258447:2	C	[4:117217097[C	25	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=258447:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_4_142688001_142713001_26C;SPAN=25479460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:9:2:-25.14:25.46
4	143652148	258707:1	T	T[4:143652462[	41	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTTCCTTTCTT;MAPQ=60;MATEID=258707:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_4_143643501_143668501_119C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
4	143652462	258707:2	C	]4:143652148]C	41	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTTCCTTTCTT;MAPQ=60;MATEID=258707:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_4_143643501_143668501_119C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
4	144395295	258967:1	C	C[4:144398754[	99	PASS	DISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=26;MATEID=258967:2;MATENM=34;NM=1;NUMPARTS=2;SCTG=c_4_144378501_144403501_5C;SPAN=3459;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:65:19:18:198,18,0:47:32:-198:198
4	144398754	258967:2	A	]4:144395295]A	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=258967:1;MATENM=1;NM=34;NUMPARTS=2;SCTG=c_4_144378501_144403501_5C;SPAN=3459;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:65:19:18:198,18,0:47:32:-198:198
4	145517661	259212:1	A	A[4:145519299[	37	PASS	EVDNC=ASSMB;HOMSEQ=TTGGCCA;MAPQ=60;MATEID=259212:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_145505501_145530501_34C;SPAN=1638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51
4	145519299	259212:2	T	]4:145517661]T	37	PASS	EVDNC=ASSMB;HOMSEQ=TTGGCCA;MAPQ=60;MATEID=259212:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_145505501_145530501_34C;SPAN=1638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51
4	145607336	259250:2	G	[4:132470632[G	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTAACCCAGACTA;MAPQ=60;MATEID=259250:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_145603501_145628501_39C;SPAN=13136704;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:7:6:-34.76:34.76
4	145607589	489652:1	G	G[9:30288138[	40	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=489652:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_41C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
4	145607890	479457:1	T	T[8:136646252[	16	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=479457:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:145607890(+)-8:136646252(-)__8_136636501_136661501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:36:16.4:16.4,0,72.5:0:8:-16.29:18.4
4	145998429	259347:1	T	T[4:146006589[	99	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=259347:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_4_145995501_146020501_17C;SPAN=8160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:17:11.4:125.4,11.4,0:41:0:-125.4:125.4
4	146006589	259347:2	C	]4:145998429]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=259347:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_4_145995501_146020501_17C;SPAN=8160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:17:11.4:125.4,11.4,0:41:0:-125.4:125.4
4	146286440	259415:1	C	]4:146287045]C	20	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=259415:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:146286440(-)-4:146287045(+)__4_146265001_146290001D;SPAN=605;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:67:20.9:20.9,0,146.3:0:12:-20.78:26.34
4	146287045	259415:2	T	T[4:146286440[	20	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=259415:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:146286440(-)-4:146287045(+)__4_146265001_146290001D;SPAN=605;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:67:20.9:20.9,0,146.3:0:12:-20.78:26.34
4	147282100	259711:2	G	[4:134969975[G	46	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AATGAG;MAPQ=60;MATEID=259711:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_147269501_147294501_1C;SPAN=12312125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:9:12:-46.99:46.99
4	148637296	717675:1	C	C[14:106249864[	18	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=717675:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106232001_106257001_8C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87
4	149239904	260547:1	A	A[4:149240230[	58	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTGGGCTGCTCTA;MAPQ=60;MATEID=260547:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149229501_149254501_71C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
4	149240230	260547:2	A	]4:149239904]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTGGGCTGCTCTA;MAPQ=60;MATEID=260547:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149229501_149254501_71C;SPAN=326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11
4	149264903	260549:2	T	[4:116655850[T	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=260549:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116655850(-)-4:149264903(-)__4_149254001_149279001D;SPAN=32609053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59
4	149321671	260567:1	T	T[4:149322303[	14	PASS	EVDNC=ASSMB;INSERTION=GTA;MAPQ=60;MATEID=260567:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_149303001_149328001_34C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39
4	149322303	260567:2	T	]4:149321671]T	14	PASS	EVDNC=ASSMB;INSERTION=GTA;MAPQ=60;MATEID=260567:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_149303001_149328001_34C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39
4	149687001	260688:2	A	]1:53954236]A	30	PASS	EVDNC=ASSMB;HOMSEQ=ACATAA;MAPQ=60;MATEID=260688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149670501_149695501_34C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15
4	149780119	260717:1	A	]4:149807097]A	23	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=260717:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149793001_149818001_2C;SPAN=26978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15
4	149807097	260717:2	A	A[4:149780119[	23	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=260717:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149793001_149818001_2C;SPAN=26978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15
4	150090161	260794:1	T	]4:150090494]T	14	PASS	EVDNC=ASSMB;HOMSEQ=TTTGGGA;MAPQ=60;MATEID=260794:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150087001_150112001_35C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:42:14.6:14.6,0,90.5:8:0:-14.6:17.8
4	150090494	260794:2	A	A[4:150090161[	14	PASS	EVDNC=ASSMB;HOMSEQ=TTTGGGA;MAPQ=60;MATEID=260794:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150087001_150112001_35C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:42:14.6:14.6,0,90.5:8:0:-14.6:17.8
4	150697691	261070:1	A	]4:150891227]A	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=261070:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_150871001_150896001_14C;SPAN=193536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:3:-19.19:19.19
4	150824964	261103:1	C	C[4:151005890[	29	PASS	EVDNC=ASSMB;HOMSEQ=CACC;MAPQ=60;MATEID=261103:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150993501_151018501_23C;SPAN=180926;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	150889529	261357:1	T	T[4:151614011[	23	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=AC;MAPQ=60;MATEID=261357:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_71C;SPAN=724482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:6:8:-23.53:23.59
4	150891227	261070:2	A	A[4:150697691[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=261070:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_150871001_150896001_14C;SPAN=193536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:3:-19.19:19.19
4	151005890	261103:2	C	]4:150824964]C	29	PASS	EVDNC=ASSMB;HOMSEQ=CACC;MAPQ=60;MATEID=261103:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150993501_151018501_23C;SPAN=180926;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	151419570	261276:1	T	T[4:151420401[	20	PASS	EVDNC=ASSMB;HOMSEQ=GTCTGTTCCTCATTCTT;MAPQ=60;MATEID=261276:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151410001_151435001_2C;SPAN=831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:44:20.6:20.6,0,89.9:10:0:-20.64:23.11
4	151420401	261276:2	G	]4:151419570]G	20	PASS	EVDNC=ASSMB;HOMSEQ=GTCTGTTCCTCATTCTT;MAPQ=60;MATEID=261276:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151410001_151435001_2C;SPAN=831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:44:20.6:20.6,0,89.9:10:0:-20.64:23.11
4	151528024	261359:1	C	]4:151617065]C	47	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=261359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_58C;SPAN=89041;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
4	151538082	261326:2	T	[4:132747922[T	67	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AG;INSERTION=TGGGAAGCAGGGAATTGCTGCTGGAAAGACAACCAGATCATGTCTGCCATAGTGCTCAAAGAAAAATAATTTTAAAGTTACAGAAA;MAPQ=60;MATEID=261326:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151532501_151557501_28C;SPAN=18790160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:30:8:67.4,0,8:16:10:-70.2:70.2
4	151614011	261357:2	A	]4:150889529]A	23	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AC;MAPQ=60;MATEID=261357:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_71C;SPAN=724482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:6:8:-23.53:23.59
4	151617065	261359:2	G	G[4:151528024[	47	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=261359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_58C;SPAN=89041;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
4	151810203	261406:2	G	]4:113846014]G	39	PASS	DISC_MAPQ=25;EVDNC=TSI_G;HOMSEQ=GG;INSERTION=GGTTTTCTAGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTCTTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCGTAATTGCCCTGGCCAGAACTTC;MAPQ=60;MATEID=261406:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151802001_151827001_73C;SPAN=37964189;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:11:3:-39.77:39.77
4	152998534	261761:2	T	[4:127800198[T	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTAA;MAPQ=60;MATEID=261761:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_152978001_153003001_10C;SPAN=25198336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:13:11:-61.54:61.54
4	153093581	262620:1	G	[4:155297937[G	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=262620:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_94C;SPAN=2204356;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:3:4:-13.83:15.94
4	153172444	699197:1	C	]14:55912669]C	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=699197:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_55909001_55934001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:11:9:-36.66:36.66
4	153212136	257457:2	T	]4:139735224]T	23	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=257457:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139723501_139748501_83C;SPAN=13476912;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
4	153256883	698839:1	G	G[14:54749560[	22	PASS	EVDNC=ASSMB;INSERTION=CAAAACGCTAACAAAATAAATAG;MAPQ=60;MATEID=698839:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54733001_54758001_25C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:25:22.7:22.7,0,39.2:9:0:-22.68:22.95
4	153664092	262006:2	G	]4:141316353]G	23	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=262006:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_153664001_153689001_70C;SPAN=12347739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
4	154157039	262258:1	C	C[4:154212720[	62	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=262258:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:154157039(+)-4:154212720(-)__4_154203001_154228001D;SPAN=55681;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:37:29.3:62.3,0,29.3:0:22:-62.79:62.79
4	154157044	988278:1	A	[Un_KN707710v1_decoy:1[A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988278:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_561_1_5701_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:11:9.3:102.3,9.3,0:34:0:-102.3:102.3
4	154212720	262258:2	A	]4:154157039]A	62	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=262258:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:154157039(+)-4:154212720(-)__4_154203001_154228001D;SPAN=55681;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:37:29.3:62.3,0,29.3:0:22:-62.79:62.79
4	155292496	262618:2	A	]4:122721082]A	34	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=262618:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_83C;SPAN=32571414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77
4	155293071	462485:1	G	G[8:91551154[	24	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=462485:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_91532001_91557001_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
4	155297937	262620:2	C	[4:153093581[C	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=262620:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_155281001_155306001_94C;SPAN=2204356;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:3:4:-13.83:15.94
4	155418929	262665:2	C	[4:137443236[C	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=262665:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155403501_155428501_47C;SPAN=17975693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:6:2:-17.77:17.94
4	155419067	485690:1	C	C[9:10841158[	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=485690:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_10829001_10854001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:8:0:-19.94:20.25
4	155578868	262731:1	G	G]4:155582329]	43	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=262731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:155578868(+)-4:155582329(+)__4_155575001_155600001D;SPAN=3461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:22:10.4:43.4,0,10.4:0:15:-44.31:44.31
4	155582329	262731:2	C	C]4:155578868]	43	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=262731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:155578868(+)-4:155582329(+)__4_155575001_155600001D;SPAN=3461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:22:10.4:43.4,0,10.4:0:15:-44.31:44.31
4	159532150	263732:1	T	T[4:159613476[	36	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=263732:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:159532150(+)-4:159613476(-)__4_159593001_159618001D;SPAN=81326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
4	159613476	263732:2	T	]4:159532150]T	36	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=263732:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:159532150(+)-4:159613476(-)__4_159593001_159618001D;SPAN=81326;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
4	160672642	263986:1	G	]4:160672823]G	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=263986:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_160671001_160696001_4C;SPAN=181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:11:0:-25.91:26.93
4	160672823	263986:2	G	G[4:160672642[	26	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=263986:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_160671001_160696001_4C;SPAN=181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:11:0:-25.91:26.93
4	162472965	264455:1	G	G[4:162475268[	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=264455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:162472965(+)-4:162475268(-)__4_162459501_162484501D;SPAN=2303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:0:18:-52.81:52.81
4	162475268	264455:2	T	]4:162472965]T	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=264455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:162472965(+)-4:162475268(-)__4_162459501_162484501D;SPAN=2303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:0:18:-52.81:52.81
4	162657493	264507:1	T	[4:162657724[T	29	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=264507:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_162655501_162680501_9C;SPAN=231;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:7:8:-29.71:29.71
4	162657724	264507:2	T	[4:162657493[T	29	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=264507:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_162655501_162680501_9C;SPAN=231;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:7:8:-29.71:29.71
4	164281891	264869:1	T	T[4:164285064[	42	PASS	EVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=264869:2;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_4_164272501_164297501_12C;SPAN=3173;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91
4	164285064	264869:2	A	]4:164281891]A	42	PASS	EVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=264869:1;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_4_164272501_164297501_12C;SPAN=3173;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91
4	165081466	265105:1	C	C[4:165083879[	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:165081466(+)-4:165083879(-)__4_165081001_165106001D;SPAN=2413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:0:12:-36.31:36.31
4	165083879	265105:2	T	]4:165081466]T	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:165081466(+)-4:165083879(-)__4_165081001_165106001D;SPAN=2413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:0:12:-36.31:36.31
4	166756015	265491:1	G	G[4:166761920[	69	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265491:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:166756015(+)-4:166761920(-)__4_166747001_166772001D;SPAN=5905;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:16:6.3:69.3,6.3,0:0:23:-69.32:69.32
4	166761920	265491:2	A	]4:166756015]A	69	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265491:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:166756015(+)-4:166761920(-)__4_166747001_166772001D;SPAN=5905;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:16:6.3:69.3,6.3,0:0:23:-69.32:69.32
4	169359842	697857:1	A	]14:52201132]A	46	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=697857:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:169359842(-)-14:52201132(+)__14_52185001_52210001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21
4	169821466	514776:1	C	[9:120805084[C	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=514776:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120785001_120810001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:6:3:-21.56:22.23
4	169866444	266207:1	A	A]9:120805215]	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=266207:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_169858501_169883501_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:4:6:-25.35:25.35
4	170678003	509629:1	C	]9:106788574]C	20	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=509629:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:170678003(-)-9:106788574(+)__9_106771001_106796001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
4	171453361	266543:1	A	A[4:171458274[	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=266543:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:171453361(+)-4:171458274(-)__4_171451001_171476001D;SPAN=4913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92
4	171458274	266543:2	A	]4:171453361]A	75	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=266543:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:171453361(+)-4:171458274(-)__4_171451001_171476001D;SPAN=4913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92
4	172503881	266785:1	A	A[4:172512370[	42	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=266785:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_4_172504501_172529501_6C;SPAN=8489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91
4	172512370	266785:2	G	]4:172503881]G	42	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=266785:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_4_172504501_172529501_6C;SPAN=8489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91
4	173304401	266947:1	A	]4:173333626]A	29	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=266947:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_173313001_173338001_7C;SPAN=29225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	173333626	266947:2	C	C[4:173304401[	29	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=266947:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_173313001_173338001_7C;SPAN=29225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
4	173399528	266971:1	A	]4:173399668]A	40	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=266971:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_173386501_173411501_6C;SPAN=140;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
4	173399668	266971:2	A	A[4:173399528[	40	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=266971:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_173386501_173411501_6C;SPAN=140;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
4	173611967	267043:1	A	A[4:173614735[	26	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=267043:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:173611967(+)-4:173614735(-)__4_173607001_173632001D;SPAN=2768;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	173614735	267043:2	A	]4:173611967]A	26	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=267043:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:173611967(+)-4:173614735(-)__4_173607001_173632001D;SPAN=2768;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	178332605	268281:1	A	]4:178333677]A	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAG;MAPQ=60;MATEID=268281:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_178311001_178336001_12C;SPAN=1072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:23:17:-85.82:85.82
4	178332737	268282:1	T	T[4:178333677[	60	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=268282:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_4_178311001_178336001_13C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
4	178333677	268281:2	G	G[4:178332605[	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAG;MAPQ=60;MATEID=268281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_178311001_178336001_12C;SPAN=1072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:23:17:-85.82:85.82
4	178333677	268282:2	G	]4:178332737]G	60	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=268282:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_4_178311001_178336001_13C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
4	179498878	268551:1	C	]4:179517058]C	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCCTTTACTACTAACTTTAGGACAATAAGTCCTTTA;MAPQ=60;MATEID=268551:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_179511501_179536501_17C;SPAN=18180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:15:15.5:15.5,0,22.1:4:4:-15.59:15.65
4	179517058	268551:2	G	G[4:179498878[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCCTTTACTACTAACTTTAGGACAATAAGTCCTTTA;MAPQ=60;MATEID=268551:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_179511501_179536501_17C;SPAN=18180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:15:15.5:15.5,0,22.1:4:4:-15.59:15.65
4	179791878	268623:1	A	A[4:179792358[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTA;MAPQ=60;MATEID=268623:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_179781001_179806001_1C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:15:0.9:39.6,0.9,0:8:7:-41.34:41.34
4	179792358	268623:2	G	]4:179791878]G	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTA;MAPQ=60;MATEID=268623:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_179781001_179806001_1C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:15:0.9:39.6,0.9,0:8:7:-41.34:41.34
4	179989520	268718:1	A	A[4:180052226[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=268718:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:179989520(+)-4:180052226(-)__4_180050501_180075501D;SPAN=62706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	180052226	268718:2	C	]4:179989520]C	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=268718:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:179989520(+)-4:180052226(-)__4_180050501_180075501D;SPAN=62706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
4	180759783	268996:1	G	G[4:180863357[	26	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=268996:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_180859001_180884001_26C;SPAN=103574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:2:2.4:26.4,2.4,0:9:0:-26.41:26.41
4	180855405	269019:1	A	A[4:181404211[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGGTAA;MAPQ=60;MATEID=269019:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_181398001_181423001_0C;SPAN=548806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:2:3.3:36.3,3.3,0:10:6:-36.31:36.31
4	180863357	268996:2	A	]4:180759783]A	26	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=268996:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_180859001_180884001_26C;SPAN=103574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:2:2.4:26.4,2.4,0:9:0:-26.41:26.41
4	180878348	269006:1	T	T[4:180927019[	56	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269006:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_180908001_180933001_1C;SPAN=48671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:4:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	180927019	269006:2	T	]4:180878348]T	56	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269006:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_180908001_180933001_1C;SPAN=48671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:4:5.1:56.1,5.1,0:19:0:-56.11:56.11
4	180955649	269010:1	T	T[4:180957136[	19	PASS	EVDNC=ASSMB;HOMSEQ=CTCTACAGCACTTTCT;MAPQ=60;MATEID=269010:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_180957001_180982001_9C;SPAN=1487;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:2:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	180957136	269010:2	C	]4:180955649]C	19	PASS	EVDNC=ASSMB;HOMSEQ=CTCTACAGCACTTTCT;MAPQ=60;MATEID=269010:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_180957001_180982001_9C;SPAN=1487;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:2:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	180961713	269081:1	G	G[4:181779193[	33	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=269081:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_181765501_181790501_21C;SPAN=817480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:11:0:-33.01:33.01
4	181404211	269019:2	C	]4:180855405]C	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGGTAA;MAPQ=60;MATEID=269019:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_181398001_181423001_0C;SPAN=548806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:2:3.3:36.3,3.3,0:10:6:-36.31:36.31
4	181779193	269081:2	T	]4:180961713]T	33	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=269081:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_181765501_181790501_21C;SPAN=817480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:11:0:-33.01:33.01
4	181891336	269122:1	T	T[4:181952530[	19	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269122:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_181937001_181962001_3C;SPAN=61194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:1:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	181952530	269122:2	T	]4:181891336]T	19	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269122:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_181937001_181962001_3C;SPAN=61194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:1:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	182335217	477262:1	G	[8:130535526[G	99	PASS	DISC_MAPQ=42;EVDNC=ASDIS;MAPQ=60;MATEID=477262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_130511501_130536501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:25:10.5:115.5,10.5,0:27:19:-115.5:115.5
4	183247605	330678:1	C	]6:21456465]C	23	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CTATATATACTATATATA;MAPQ=60;MATEID=330678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21437501_21462501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:7:3:-24.05:24.05
4	183382550	269465:1	T	T[4:183382860[	46	PASS	EVDNC=ASSMB;HOMSEQ=ATAGCACTTTCTTT;MAPQ=60;MATEID=269465:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_183382501_183407501_9C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21
4	183382860	269465:2	A	]4:183382550]A	46	PASS	EVDNC=ASSMB;HOMSEQ=ATAGCACTTTCTTT;MAPQ=60;MATEID=269465:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_183382501_183407501_9C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21
4	184579575	269806:1	C	]4:184601585]C	23	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=269806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_184583001_184608001_4C;SPAN=22010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74
4	184601585	269806:2	G	G[4:184579575[	23	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=269806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_184583001_184608001_4C;SPAN=22010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74
4	185129516	269933:1	A	A[4:185129779[	8	PASS	EVDNC=ASSMB;HOMSEQ=TGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=269933:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_185122001_185147001_10C;SPAN=263;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:18:8.3:8.3,0,34.7:4:0:-8.144:9.2
4	185129779	269933:2	T	]4:185129516]T	8	PASS	EVDNC=ASSMB;HOMSEQ=TGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=269933:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_185122001_185147001_10C;SPAN=263;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:18:8.3:8.3,0,34.7:4:0:-8.144:9.2
4	185520603	270120:1	T	T[4:185522919[	69	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=270120:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:185520603(+)-4:185522919(-)__4_185514001_185539001D;SPAN=2316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
4	185522919	270120:2	G	]4:185520603]G	69	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=270120:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:185520603(+)-4:185522919(-)__4_185514001_185539001D;SPAN=2316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
4	188222216	270910:1	G	]4:188276133]G	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=270910:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_188258001_188283001_23C;SPAN=53917;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:7:8:-36.31:36.31
4	188276133	270910:2	G	G[4:188222216[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=270910:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_188258001_188283001_23C;SPAN=53917;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:7:8:-36.31:36.31
4	188373022	270971:1	G	]4:188373147]G	64	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=270971:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_188356001_188381001_5C;SPAN=125;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65
4	188373147	270971:2	A	A[4:188373022[	64	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=270971:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_188356001_188381001_5C;SPAN=125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65
4	188802177	271163:2	G	]4:116186292]G	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=271163:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_188797001_188822001_5C;SPAN=72615885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:3:1.8:19.8,1.8,0:7:0:-19.8:19.8
4	189136860	271284:1	T	T[4:189143119[	46	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATTACCCAGTCT;MAPQ=60;MATEID=271284:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_4_189140001_189165001_16C;SPAN=6259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:5:4.2:46.2,4.2,0:15:0:-46.21:46.21
4	189143119	271284:2	A	]4:189136860]A	46	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATTACCCAGTCT;MAPQ=60;MATEID=271284:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_4_189140001_189165001_16C;SPAN=6259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:5:4.2:46.2,4.2,0:15:0:-46.21:46.21
4	189449410	271447:1	G	G[4:189450079[	36	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=271447:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_189434001_189459001_5C;SPAN=669;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38
4	189450079	271447:2	G	]4:189449410]G	36	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=271447:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_189434001_189459001_5C;SPAN=669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38
4	189508176	271479:1	T	]4:189508329]T	61	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=271479:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_189507501_189532501_6C;SPAN=153;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:27:5.6:61.7,0,5.6:21:0:-64.38:64.38
4	189508329	271479:2	T	T[4:189508176[	61	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=271479:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_189507501_189532501_6C;SPAN=153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:27:5.6:61.7,0,5.6:21:0:-64.38:64.38
4	189948866	870919:1	T	T[20:29088471[	3	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=870919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:189948866(+)-20:29088471(-)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:81:3.8:3.8,0,198.5:0:8:-3.64:15.33
5	15864	322397:1	C	]6:150718]C	99	PASS	DISC_MAPQ=17;EVDNC=TSI_L;HOMSEQ=CTT;MAPQ=52;MATEID=322397:2;MATENM=6;NM=5;NUMPARTS=3;REPSEQ=TTT;SCTG=c_6_147001_172001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:30:10.8:118.8,10.8,0:32:13:-118.8:118.8
5	231835	272233:1	C	C[5:232743[	72	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=272233:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:231835(+)-5:232743(-)__5_220501_245501D;SPAN=908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:18:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	232743	272233:2	A	]5:231835]A	72	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=272233:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:231835(+)-5:232743(-)__5_220501_245501D;SPAN=908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:18:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	281934	272313:1	C	C]Un_KN707921v1_decoy:2561]	25	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=C;MAPQ=60;MATEID=272313:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_5_269501_294501_90C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46
5	693023	272546:1	C	C[5:784461[	40	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=272546:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:693023(+)-5:784461(-)__5_759501_784501D;SPAN=91438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:0:14:-41.11:41.11
5	697422	272493:1	G	]5:788754]G	18	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=272493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:697422(-)-5:788754(+)__5_686001_711001D;SPAN=91332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
5	710054	272506:1	T	]5:795262]T	18	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=272506:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:710054(-)-5:795262(+)__5_686001_711001D;SPAN=85208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
5	711897	272511:1	C	C[5:796051[	59	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTCCCAGTACTGTGCTC;MAPQ=60;MATEID=272511:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_710501_735501_41C;SPAN=84154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:13:8:-59.41:59.41
5	754009	272532:1	T	]5:754663]T	37	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=272532:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:754009(-)-5:754663(+)__5_735001_760001D;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:68:37.1:37.1,0,132.8:0:17:-37:40.1
5	754663	272532:2	G	G[5:754009[	37	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=272532:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:754009(-)-5:754663(+)__5_735001_760001D;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:68:37.1:37.1,0,132.8:0:17:-37:40.1
5	784461	272546:2	C	]5:693023]C	40	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=272546:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:693023(+)-5:784461(-)__5_759501_784501D;SPAN=91438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:0:14:-41.11:41.11
5	788754	272493:2	G	G[5:697422[	18	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=272493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:697422(-)-5:788754(+)__5_686001_711001D;SPAN=91332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
5	795262	272506:2	T	T[5:710054[	18	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=272506:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:710054(-)-5:795262(+)__5_686001_711001D;SPAN=85208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
5	796051	272511:2	T	]5:711897]T	59	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TTCCCAGTACTGTGCTC;MAPQ=31;MATEID=272511:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_710501_735501_41C;SPAN=84154;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:13:8:-59.41:59.41
5	1044616	272655:1	T	]5:1045417]T	94	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=272655:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1044616(-)-5:1045417(+)__5_1029001_1054001D;SPAN=801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:39:2.3:94.7,0,2.3:0:32:-99.78:99.78
5	1045417	272655:2	T	T[5:1044616[	94	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=272655:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1044616(-)-5:1045417(+)__5_1029001_1054001D;SPAN=801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:39:2.3:94.7,0,2.3:0:32:-99.78:99.78
5	1178274	272733:1	C	C[5:1180617[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=272733:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1178274(+)-5:1180617(-)__5_1176001_1201001D;SPAN=2343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6
5	1180617	272733:2	A	]5:1178274]A	99	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=272733:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1178274(+)-5:1180617(-)__5_1176001_1201001D;SPAN=2343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6
5	1364018	694524:1	C	[14:42561542[C	39	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=694524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42556501_42581501_72C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:5:11:-39.39:39.39
5	1845407	273027:1	C	]5:1846001]C	99	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=CTCTCTCTATCTCTATATGTGTCTCCATCTCTGTCTCTATCTCTAT;MAPQ=19;MATEID=273027:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_1837501_1862501_44C;SPAN=594;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:49:13.5:148.5,13.5,0:28:25:-146.9:146.9
5	1846001	273027:2	T	T[5:1845407[	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTCTCTCTATCTCTATATGTGTCTCCATCTCTGTCTCTATCTCTAT;MAPQ=60;MATEID=273027:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_1837501_1862501_44C;SPAN=594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:49:13.5:148.5,13.5,0:28:25:-146.9:146.9
5	1941042	273098:1	T	T[5:1941341[	82	PASS	EVDNC=ASSMB;HOMSEQ=GGAAAAATTTCT;MAPQ=60;MATEID=273098:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1935501_1960501_21C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:22:7.5:82.5,7.5,0:27:0:-82.52:82.52
5	1941341	273098:2	G	]5:1941042]G	82	PASS	EVDNC=ASSMB;HOMSEQ=GGAAAAATTTCT;MAPQ=60;MATEID=273098:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1935501_1960501_21C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:22:7.5:82.5,7.5,0:27:0:-82.52:82.52
5	1950911	273108:1	G	G[5:1951342[	79	PASS	EVDNC=ASSMB;HOMSEQ=GTCGTCTGCTGTG;MAPQ=60;MATEID=273108:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_1935501_1960501_49C;SPAN=431;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68
5	1951342	273108:2	G	]5:1950911]G	79	PASS	EVDNC=ASSMB;HOMSEQ=GTCGTCTGCTGTG;MAPQ=60;MATEID=273108:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_1935501_1960501_49C;SPAN=431;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68
5	1968299	273121:1	G	G[5:1971470[	35	PASS	EVDNC=ASSMB;HOMSEQ=AAATAAAGAAAATTGTGG;MAPQ=60;MATEID=273121:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1960001_1985001_15C;SPAN=3171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:190:35.8:35.8,0,441.8:27:0:-35.72:56.29
5	1971470	273121:2	A	]5:1968299]A	35	PASS	EVDNC=ASSMB;HOMSEQ=AAATAAAGAAAATTGTGG;MAPQ=60;MATEID=273121:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1960001_1985001_15C;SPAN=3171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:190:35.8:35.8,0,441.8:27:0:-35.72:56.29
5	2145979	273172:1	A	A[5:2146365[	21	PASS	DISC_MAPQ=6;EVDNC=ASDIS;INSERTION=AGTCCAGAGCCTCCACCTCCTG;MAPQ=26;MATEID=273172:2;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_5_2131501_2156501_26C;SPAN=386;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:78:21.2:21.2,0,173:8:5:-20.99:28.09
5	2146365	273172:2	A	]5:2145979]A	21	PASS	DISC_MAPQ=2;EVDNC=ASDIS;INSERTION=AGTCCAGAGCCTCCACCTCCTG;MAPQ=10;MATEID=273172:1;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_5_2131501_2156501_26C;SPAN=386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:78:21.2:21.2,0,173:8:5:-20.99:28.09
5	3499159	273747:1	T	T[5:3499469[	18	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCAGACAT;MAPQ=60;MATEID=273747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_126C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
5	3499469	273747:2	A	]5:3499159]A	18	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCAGACAT;MAPQ=60;MATEID=273747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_126C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
5	3502213	273749:1	T	T[5:3502528[	0	PASS	EVDNC=ASSMB;HOMSEQ=CAAAATTTATTTTT;MAPQ=60;MATEID=273749:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_162C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:123:14.4:0,14.4,336.6:6:0:14.77:9.6
5	3502528	273749:2	C	]5:3502213]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CAAAATTTATTTTT;MAPQ=60;MATEID=273749:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_162C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:123:14.4:0,14.4,336.6:6:0:14.77:9.6
5	5930999	274695:1	A	]5:5931169]A	19	PASS	EVDNC=ASSMB;HOMSEQ=ATAATGCATGCCTGAATGTGTGCA;MAPQ=60;MATEID=274695:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_5929001_5954001_66C;SPAN=170;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:10:0:-19.52:22.68
5	5931169	274695:2	A	A[5:5930999[	19	PASS	EVDNC=ASSMB;HOMSEQ=ATAATGCATGCCTGAATGTGTGCA;MAPQ=60;MATEID=274695:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_5929001_5954001_66C;SPAN=170;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:10:0:-19.52:22.68
5	6481317	274867:1	C	]5:6505336]C	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AACAGA;MAPQ=60;MATEID=274867:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_6492501_6517501_47C;SPAN=24019;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:5:11:-35.78:35.78
5	6505336	274867:2	C	C[5:6481317[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AACAGA;MAPQ=60;MATEID=274867:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_6492501_6517501_47C;SPAN=24019;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:5:11:-35.78:35.78
5	7372255	275284:1	C	]5:7372743]C	32	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=275284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_7350001_7375001_31C;SPAN=488;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:5:9:-32.59:32.59
5	7372743	275284:2	A	A[5:7372255[	32	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=5;MATEID=275284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_7350001_7375001_31C;SPAN=488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:5:9:-32.59:32.59
5	8557583	275732:1	T	]5:8573594]T	12	PASS	EVDNC=ASSMB;INSERTION=AACTAAGGATAGTCTTTTT;MAPQ=60;MATEID=275732:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_8550501_8575501_60C;SPAN=16011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
5	8573594	275732:2	G	G[5:8557583[	12	PASS	EVDNC=ASSMB;INSERTION=AACTAAGGATAGTCTTTTT;MAPQ=60;MATEID=275732:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_8550501_8575501_60C;SPAN=16011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
5	8897316	284229:1	C	]5:28844816]C	50	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=284229:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28836501_28861501_24C;SPAN=19947500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:18:0:-51.49:51.49
5	9400507	276045:1	T	T[5:9400769[	29	PASS	EVDNC=ASSMB;HOMSEQ=ACATTTTTT;MAPQ=60;MATEID=276045:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_9383501_9408501_9C;SPAN=262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
5	9400769	276045:2	A	]5:9400507]A	29	PASS	EVDNC=ASSMB;HOMSEQ=ACATTTTTT;MAPQ=60;MATEID=276045:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_9383501_9408501_9C;SPAN=262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
5	10005166	276277:1	T	T[5:10005471[	99	PASS	DISC_MAPQ=53;EVDNC=ASDIS;INSERTION=CAC;MAPQ=60;MATEID=276277:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_9996001_10021001_17C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:70:19:19.5:214.5,19.5,0:58:17:-214.6:214.6
5	10005471	276277:2	A	]5:10005166]A	99	PASS	DISC_MAPQ=28;EVDNC=ASDIS;INSERTION=CAC;MAPQ=60;MATEID=276277:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_9996001_10021001_17C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:70:19:19.5:214.5,19.5,0:58:17:-214.6:214.6
5	10336485	276443:1	G	G[5:10336766[	2	PASS	EVDNC=ASSMB;HOMSEQ=CTGCACTCCAGCCTGGG;MAPQ=60;MATEID=276443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10314501_10339501_45C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:50:2.6:2.6,0,121.4:5:0:-2.45:9.611
5	10336766	276443:2	C	]5:10336485]C	2	PASS	EVDNC=ASSMB;HOMSEQ=CTGCACTCCAGCCTGGG;MAPQ=60;MATEID=276443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10314501_10339501_45C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:50:2.6:2.6,0,121.4:5:0:-2.45:9.611
5	10756070	276612:1	C	C[5:10756404[	23	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=276612:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10755501_10780501_80C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18
5	10756404	276612:2	G	]5:10756070]G	23	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=276612:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10755501_10780501_80C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18
5	11160451	276825:1	A	A[5:11399503[	18	PASS	EVDNC=ASSMB;INSERTION=TTATCTCATACAAT;MAPQ=60;MATEID=276825:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11392501_11417501_15C;SPAN=239052;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
5	11399503	276825:2	C	]5:11160451]C	18	PASS	EVDNC=ASSMB;INSERTION=TTATCTCATACAAT;MAPQ=60;MATEID=276825:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11392501_11417501_15C;SPAN=239052;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
5	11578757	276958:1	T	]5:11859207]T	20	PASS	EVDNC=ASSMB;HOMSEQ=TTAA;MAPQ=60;MATEID=276958:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11858001_11883001_108C;SPAN=280450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
5	11593958	276916:1	A	]5:11696236]A	47	PASS	EVDNC=ASSMB;HOMSEQ=ATAAAACT;MAPQ=60;MATEID=276916:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_11686501_11711501_17C;SPAN=102278;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03
5	11655906	303817:1	T	[5:94472477[T	23	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=303817:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_94472001_94497001_10C;SPAN=82816571;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:6:4:-24.74:24.74
5	11696236	276916:2	T	T[5:11593958[	47	PASS	EVDNC=ASSMB;HOMSEQ=ATAAAACT;MAPQ=60;MATEID=276916:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_11686501_11711501_17C;SPAN=102278;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03
5	11859207	276958:2	A	A[5:11578757[	20	PASS	EVDNC=ASSMB;HOMSEQ=TTAA;MAPQ=60;MATEID=276958:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11858001_11883001_108C;SPAN=280450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
5	12186388	277088:1	T	T[5:12186680[	10	PASS	EVDNC=ASSMB;HOMSEQ=AGTATTTTGTTCT;MAPQ=60;MATEID=277088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_12176501_12201501_61C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:35:10.1:10.1,0,76.1:6:0:-9.968:13.04
5	12186680	277088:2	A	]5:12186388]A	10	PASS	EVDNC=ASSMB;HOMSEQ=AGTATTTTGTTCT;MAPQ=60;MATEID=277088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_12176501_12201501_61C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:35:10.1:10.1,0,76.1:6:0:-9.968:13.04
5	13416495	277704:1	C	C[5:13422742[	92	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATCACGTCAACC;MAPQ=60;MATEID=277704:2;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_5_13401501_13426501_95C;SPAN=6247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:31:8.4:92.4,8.4,0:29:0:-92.42:92.42
5	13422742	277704:2	G	]5:13416495]G	92	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATCACGTCAACC;MAPQ=60;MATEID=277704:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_5_13401501_13426501_95C;SPAN=6247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:31:8.4:92.4,8.4,0:29:0:-92.42:92.42
5	16124701	278656:1	A	A[5:16125383[	15	PASS	EVDNC=ASSMB;INSERTION=TAGAA;MAPQ=60;MATEID=278656:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_16121001_16146001_70C;SPAN=682;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:63:15.5:15.5,0,140.9:10:0:-15.3:21.37
5	16125383	278656:2	C	]5:16124701]C	15	PASS	EVDNC=ASSMB;INSERTION=TAGAA;MAPQ=60;MATEID=278656:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_16121001_16146001_70C;SPAN=682;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:63:15.5:15.5,0,140.9:10:0:-15.3:21.37
5	16556459	278904:1	T	]5:16743998]T	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=278904:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_16733501_16758501_7C;SPAN=187539;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:5:6:-22.05:23.72
5	16743998	278904:2	T	T[5:16556459[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=278904:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_16733501_16758501_7C;SPAN=187539;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:5:6:-22.05:23.72
5	17508114	279336:1	C	]5:17621777]C	15	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=279336:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508114(-)-5:17621777(+)__5_17615501_17640501D;SPAN=113663;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:39:15.5:15.5,0,81.5:0:8:-15.45:18.09
5	17508349	279337:1	G	G[5:17622087[	50	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=279337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508349(+)-5:17622087(-)__5_17615501_17640501D;SPAN=113738;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:0:18:-49.98:49.98
5	17621777	279336:2	T	T[5:17508114[	15	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=279336:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508114(-)-5:17621777(+)__5_17615501_17640501D;SPAN=113663;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:39:15.5:15.5,0,81.5:0:8:-15.45:18.09
5	17622087	279337:2	C	]5:17508349]C	50	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=279337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508349(+)-5:17622087(-)__5_17615501_17640501D;SPAN=113738;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:0:18:-49.98:49.98
5	19375266	280181:1	A	A[5:19376287[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280181:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:19375266(+)-5:19376287(-)__5_19355001_19380001D;SPAN=1021;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3
5	19376287	280181:2	C	]5:19375266]C	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=280181:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:19375266(+)-5:19376287(-)__5_19355001_19380001D;SPAN=1021;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3
5	20832371	280763:1	T	[5:34371648[T	17	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=280763:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20832371(-)-5:34371648(-)__5_20825001_20850001D;SPAN=13539277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
5	20834797	280766:1	T	T]5:34371504]	10	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280766:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20834797(+)-5:34371504(+)__5_20825001_20850001D;SPAN=13536707;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:57:10.4:10.4,0,132.5:0:8:-10.39:16.63
5	20849244	280776:1	T	]5:20854316]T	32	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=19;MATEID=280776:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_20825001_20850001_93C;SPAN=5072;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:48:32.9:32.9,0,85.7:10:10:-32.72:34.13
5	20854316	280776:2	G	G[5:20849244[	32	PASS	DISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=43;MATEID=280776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_20825001_20850001_93C;SPAN=5072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:48:32.9:32.9,0,85.7:10:10:-32.72:34.13
5	21149159	280926:1	C	]5:21172268]C	75	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=280926:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_21168001_21193001_24C;SPAN=23109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88
5	21172268	280926:2	A	A[5:21149159[	75	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=280926:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_21168001_21193001_24C;SPAN=23109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88
5	21207604	280936:2	T	]4:79973439]T	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280936:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:79973439(+)-5:21207604(-)__5_21192501_21217501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:36:9.9:108.9,9.9,0:0:34:-108.9:108.9
5	21450121	281078:1	T	T[5:21452317[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=281078:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:21450121(+)-5:21452317(-)__5_21437501_21462501D;SPAN=2196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:6:11.7:128.7,11.7,0:0:42:-128.7:128.7
5	21452317	281078:2	T	]5:21450121]T	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=281078:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:21450121(+)-5:21452317(-)__5_21437501_21462501D;SPAN=2196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:6:11.7:128.7,11.7,0:0:42:-128.7:128.7
5	22796516	281614:1	T	T[5:22796820[	17	PASS	EVDNC=ASSMB;HOMSEQ=CAGATTTTTTATCTT;MAPQ=60;MATEID=281614:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_22785001_22810001_61C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:46:17:17,0,96.2:9:0:-16.78:20.14
5	22796820	281614:2	C	]5:22796516]C	17	PASS	EVDNC=ASSMB;HOMSEQ=CAGATTTTTTATCTT;MAPQ=60;MATEID=281614:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_22785001_22810001_61C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:46:17:17,0,96.2:9:0:-16.78:20.14
5	23902973	282017:1	C	C[5:23905101[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=282017:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:23902973(+)-5:23905101(-)__5_23887501_23912501D;SPAN=2128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:12:11.1:122.1,11.1,0:0:40:-122.1:122.1
5	23905101	282017:2	A	]5:23902973]A	99	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=282017:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:23902973(+)-5:23905101(-)__5_23887501_23912501D;SPAN=2128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:12:11.1:122.1,11.1,0:0:40:-122.1:122.1
5	24370433	282268:1	T	T[5:24373328[	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAACAAAATTTTT;MAPQ=60;MATEID=282268:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_5_24353001_24378001_2C;SPAN=2895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:111:99:167,0,110.9:60:0:-167.4:167.4
5	24373328	282268:2	T	]5:24370433]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAACAAAATTTTT;MAPQ=60;MATEID=282268:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_5_24353001_24378001_2C;SPAN=2895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:111:99:167,0,110.9:60:0:-167.4:167.4
5	24776152	282465:1	T	]5:24783207]T	0	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=282465:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_24769501_24794501_13C;SPAN=7055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:85:0.6:0,0.6,214.5:7:0:0.7858:12.84
5	24783207	282465:2	T	T[5:24776152[	0	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=282465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_24769501_24794501_13C;SPAN=7055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:85:0.6:0,0.6,214.5:7:0:0.7858:12.84
5	25623489	282763:1	A	]5:25625607]A	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAATTAAACGCAATTAACCTCACAATTAA;MAPQ=60;MATEID=282763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_25602501_25627501_20C;SPAN=2118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:64:48.2:48.2,0,110.9:16:10:-48.03:49.48
5	25625607	282763:2	C	C[5:25623489[	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAATTAAACGCAATTAACCTCACAATTAA;MAPQ=60;MATEID=282763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_25602501_25627501_20C;SPAN=2118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:64:48.2:48.2,0,110.9:16:10:-48.03:49.48
5	26119052	283048:1	T	T[5:26119284[	14	PASS	EVDNC=ASSMB;HOMSEQ=TTTACT;MAPQ=60;MATEID=283048:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26117001_26142001_22C;SPAN=232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:54:14.6:14.6,0,120.2:9:0:-14.53:19.44
5	26119284	283048:2	T	]5:26119052]T	14	PASS	EVDNC=ASSMB;HOMSEQ=TTTACT;MAPQ=60;MATEID=283048:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26117001_26142001_22C;SPAN=232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:54:14.6:14.6,0,120.2:9:0:-14.53:19.44
5	26172289	283066:1	G	G[5:26172699[	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAAA;MAPQ=60;MATEID=283066:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26166001_26191001_68C;SPAN=410;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:7:4:-17.06:20.24
5	26172699	283066:2	A	]5:26172289]A	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAAA;MAPQ=60;MATEID=283066:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26166001_26191001_68C;SPAN=410;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:7:4:-17.06:20.24
5	26230726	283092:2	C	C[3:165861102[	39	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=283092:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:165861102(-)-5:26230726(+)__5_26215001_26240001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:0:13:-39.61:39.61
5	26667517	283242:1	T	T[5:26667749[	41	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=283242:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26656001_26681001_15C;SPAN=232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:63:41.9:41.9,0,114.5:18:0:-41.71:43.69
5	26667749	283242:2	G	]5:26667517]G	41	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=283242:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_26656001_26681001_15C;SPAN=232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:63:41.9:41.9,0,114.5:18:0:-41.71:43.69
5	26796592	283294:1	T	T[5:26801788[	99	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=283294:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_5_26778501_26803501_167C;SPAN=5196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:34:13.2:145.2,13.2,0:48:0:-145.2:145.2
5	26801788	283294:2	T	]5:26796592]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=283294:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_5_26778501_26803501_167C;SPAN=5196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:34:13.2:145.2,13.2,0:48:0:-145.2:145.2
5	27870154	283814:1	C	]5:27889118]C	25	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=TAGTTTT;MAPQ=60;MATEID=283814:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_27881001_27906001_7C;SPAN=18964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:7:6:-25.42:25.66
5	27889118	283814:2	C	C[5:27870154[	25	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TAGTTTT;MAPQ=60;MATEID=283814:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_27881001_27906001_7C;SPAN=18964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:7:6:-25.42:25.66
5	28235202	283944:2	T	T[1:53954687[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=283944:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28224001_28249001_78C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:9:10:-38.69:38.69
5	28813472	284223:1	G	G[5:28813723[	2	PASS	EVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=284223:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28812001_28837001_53C;SPAN=251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:60:2.9:2.9,0,148.1:6:0:-2.941:11.53
5	28813723	284223:2	C	]5:28813472]C	2	PASS	EVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=284223:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28812001_28837001_53C;SPAN=251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:60:2.9:2.9,0,148.1:6:0:-2.941:11.53
5	28844816	284229:2	C	C[5:8897316[	50	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=284229:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28836501_28861501_24C;SPAN=19947500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:18:0:-51.49:51.49
5	28932560	284280:1	A	A]5:28935019]	28	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=284280:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:28932560(+)-5:28935019(+)__5_28910001_28935001D;SPAN=2459;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:0:11:-28.44:28.58
5	28932749	284281:1	A	[5:28934786[A	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTGAAGAAATAGT;MAPQ=60;MATEID=284281:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_28910001_28935001_130C;SPAN=2037;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:63:71.6:84.8,0,71.6:26:5:-84.66:84.66
5	28934786	284281:2	T	[5:28932749[T	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTGAAGAAATAGT;MAPQ=60;MATEID=284281:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_28910001_28935001_130C;SPAN=2037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:63:71.6:84.8,0,71.6:26:5:-84.66:84.66
5	28935019	284280:2	T	T]5:28932560]	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=284280:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:28932560(+)-5:28935019(+)__5_28910001_28935001D;SPAN=2459;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:0:11:-28.44:28.58
5	31190135	285245:1	T	[5:31191075[T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=285245:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_31188501_31213501_4C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:50:13.8:151.8,13.8,0:33:31:-151.8:151.8
5	31191075	285245:2	A	[5:31190135[A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=285245:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_31188501_31213501_4C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:50:13.8:151.8,13.8,0:33:31:-151.8:151.8
5	33830191	286429:1	A	]5:34171242]A	17	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=286429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34153001_34178001_36C;SPAN=341051;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
5	34171242	286429:2	A	A[5:33830191[	17	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=286429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34153001_34178001_36C;SPAN=341051;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
5	34304693	286531:1	T	T[5:34307800[	12	PASS	DISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=ATTTTTTTT;MAPQ=60;MATEID=286531:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34300001_34325001_48C;SPAN=3107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:60:12.8:12.8,0,138.2:5:6:-12.84:18.99
5	34307800	286531:2	A	]5:34304693]A	12	PASS	DISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=ATTTTTTTT;MAPQ=60;MATEID=286531:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34300001_34325001_48C;SPAN=3107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:60:12.8:12.8,0,138.2:5:6:-12.84:18.99
5	34371504	280766:2	C	C]5:20834797]	10	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=280766:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20834797(+)-5:34371504(+)__5_20825001_20850001D;SPAN=13536707;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:57:10.4:10.4,0,132.5:0:8:-10.39:16.63
5	34371648	280763:2	G	[5:20832371[G	17	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=280763:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20832371(-)-5:34371648(-)__5_20825001_20850001D;SPAN=13539277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
5	35191048	286918:1	C	C[5:35191370[	16	PASS	EVDNC=ASSMB;HOMSEQ=CAGATGTGTTATTTTC;MAPQ=60;MATEID=286918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35182001_35207001_0C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:59:16.4:16.4,0,131.9:10:0:-16.43:21.68
5	35191370	286918:2	C	]5:35191048]C	16	PASS	EVDNC=ASSMB;HOMSEQ=CAGATGTGTTATTTTC;MAPQ=60;MATEID=286918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35182001_35207001_0C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:59:16.4:16.4,0,131.9:10:0:-16.43:21.68
5	35614083	287048:1	G	G[5:35614385[	30	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATTGAGG;MAPQ=60;MATEID=287048:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35598501_35623501_58C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:12:0:-30.06:30.47
5	35614385	287048:2	A	]5:35614083]A	30	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATTGAGG;MAPQ=60;MATEID=287048:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35598501_35623501_58C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:12:0:-30.06:30.47
5	37293717	287660:1	T	T[5:37294029[	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGCAAATGATGATTCTT;MAPQ=60;MATEID=287660:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_37289001_37314001_85C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:43:12:132,12,0:41:0:-132:132
5	37294029	287660:2	T	]5:37293717]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGCAAATGATGATTCTT;MAPQ=60;MATEID=287660:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_37289001_37314001_85C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:43:12:132,12,0:41:0:-132:132
5	39787650	288543:1	A	]9:7741406]A	64	PASS	DISC_MAPQ=17;EVDNC=ASDIS;INSERTION=GAGTT;MAPQ=26;MATEID=288543:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_39763501_39788501_1C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:20:12:-67.65:67.65
5	40662832	288928:1	T	T]5:40709960]	29	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=288928:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:40662832(+)-5:40709960(+)__5_40645501_40670501D;SPAN=47128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	40709960	288928:2	A	A]5:40662832]	29	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=288928:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:40662832(+)-5:40709960(+)__5_40645501_40670501D;SPAN=47128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	40794513	288988:1	T	T[5:40794877[	85	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=288988:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_40792501_40817501_91C;SPAN=364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
5	40794877	288988:2	T	]5:40794513]T	85	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=288988:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_40792501_40817501_91C;SPAN=364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
5	41599348	289232:1	A	A[5:41600022[	29	PASS	EVDNC=ASSMB;HOMSEQ=AGAAA;MAPQ=60;MATEID=289232:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_5_41576501_41601501_158C;SPAN=674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92
5	41600022	289232:2	A	]5:41599348]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AGAAA;MAPQ=60;MATEID=289232:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_5_41576501_41601501_158C;SPAN=674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92
5	41603901	289246:1	A	A[5:41604211[	23	PASS	EVDNC=ASSMB;HOMSEQ=AACTCTGAGATGA;MAPQ=60;MATEID=289246:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_5_41601001_41626001_59C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
5	41604211	289246:2	A	]5:41603901]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AACTCTGAGATGA;MAPQ=60;MATEID=289246:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_5_41601001_41626001_59C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
5	42165839	289387:1	T	T[5:42167668[	99	PASS	EVDNC=ASSMB;HOMSEQ=TTAAAACTTTGTT;MAPQ=60;MATEID=289387:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_42164501_42189501_125C;SPAN=1829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:32:9.3:102.3,9.3,0:34:0:-102.3:102.3
5	42167668	289387:2	T	]5:42165839]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TTAAAACTTTGTT;MAPQ=60;MATEID=289387:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_42164501_42189501_125C;SPAN=1829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:32:9.3:102.3,9.3,0:34:0:-102.3:102.3
5	43063268	289697:1	G	]6:51379339]G	23	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AAAGAAAG;INSERTION=GAA;MAPQ=60;MATEID=289697:2;MATENM=0;NM=6;NUMPARTS=3;REPSEQ=AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG;SCTG=c_5_43046501_43071501_75C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:4.8:23.4,4.8,0:8:11:-23.48:23.48
5	43086248	409531:1	C	[7:80914418[C	15	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=409531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:43086248(-)-7:80914418(-)__7_80899001_80924001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:63:15.5:15.5,0,140.9:0:10:-15.3:21.37
5	43616951	290284:1	A	]5:44910547]A	37	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=290284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_44908501_44933501_7C;SPAN=1293596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:13:0:-37.47:37.47
5	44910547	290284:2	A	A[5:43616951[	37	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=290284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_44908501_44933501_7C;SPAN=1293596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:13:0:-37.47:37.47
5	46144117	290591:1	G	G[5:46145889[	99	PASS	EVDNC=ASSMB;INSERTION=GTGAAAAA;MAPQ=60;MATEID=290591:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_46133501_46158501_27C;SPAN=1772;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
5	46145889	290591:2	G	]5:46144117]G	99	PASS	EVDNC=ASSMB;INSERTION=GTGAAAAA;MAPQ=60;MATEID=290591:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_46133501_46158501_27C;SPAN=1772;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
5	46164007	290597:1	A	A[5:46164338[	94	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTAGA;MAPQ=60;MATEID=290597:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_5_46158001_46183001_87C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:39:2.3:94.7,0,2.3:32:0:-99.78:99.78
5	46164338	290597:2	A	]5:46164007]A	94	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTAGA;MAPQ=60;MATEID=290597:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_5_46158001_46183001_87C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:39:2.3:94.7,0,2.3:32:0:-99.78:99.78
5	46270554	290636:1	T	T[5:46275735[	12	PASS	EVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=290636:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46256001_46281001_34C;SPAN=5181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05
5	46275735	290636:2	T	]5:46270554]T	12	PASS	EVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=290636:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46256001_46281001_34C;SPAN=5181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05
5	46405227	290750:1	T	T[5:46410473[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCATT;MAPQ=60;MATEID=290750:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_46403001_46428001_13C;SPAN=5246;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:38:42.2:42.2,0,52.1:8:11:-42.13:42.21
5	46410473	290750:2	G	]5:46405227]G	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCATT;MAPQ=60;MATEID=290750:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_46403001_46428001_13C;SPAN=5246;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:38:42.2:42.2,0,52.1:8:11:-42.13:42.21
5	46491020	290851:1	A	]5:46539787]A	26	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=290851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46491020(-)-5:46539787(+)__5_46476501_46501501D;SPAN=48767;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
5	46539787	290851:2	T	T[5:46491020[	26	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=290851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46491020(-)-5:46539787(+)__5_46476501_46501501D;SPAN=48767;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
5	46540265	291753:1	A	]5:46649184]A	33	PASS	DISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=AAGCATTCTCAGAAACTTCTT;MAPQ=60;MATEID=291753:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46648001_46673001_470C;SPAN=108919;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:5:3:33,3,0:8:3:-33.01:33.01
5	46565779	291959:1	T	T[5:46736987[	29	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=291959:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46565779(+)-5:46736987(-)__5_46721501_46746501D;SPAN=171208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:2:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	46571621	291810:1	G	G[5:46689519[	23	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=291810:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46571621(+)-5:46689519(-)__5_46672501_46697501D;SPAN=117898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
5	46649184	291753:2	T	T[5:46540265[	33	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=AAGCATTCTCAGAAACTTCTT;MAPQ=46;MATEID=291753:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46648001_46673001_470C;SPAN=108919;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:5:3:33,3,0:8:3:-33.01:33.01
5	46658868	292044:1	A	]5:46783997]A	54	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=292044:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46658868(-)-5:46783997(+)__5_46770501_46795501D;SPAN=125129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55
5	46659126	291914:1	G	G[5:46708874[	69	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=291914:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46659126(+)-5:46708874(-)__5_46697001_46722001D;SPAN=49748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	46689519	291810:2	T	]5:46571621]T	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=291810:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46571621(+)-5:46689519(-)__5_46672501_46697501D;SPAN=117898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
5	46692541	291853:1	A	A[5:46692991[	89	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=AAACTAGACAGAAGCATTCTCAGAAACTGCTTTGTGATGTGTGCATTTAACTCACAGACTTGA;MAPQ=60;MATEID=291853:2;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_5_46672501_46697501_418C;SPAN=450;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:28:8.1:89.1,8.1,0:22:11:-89.12:89.12
5	46692991	291853:2	A	]5:46692541]A	89	PASS	DISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=AAACTAGACAGAAGCATTCTCAGAAACTGCTTTGTGATGTGTGCATTTAACTCACAGACTTGA;MAPQ=0;MATEID=291853:1;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_5_46672501_46697501_418C;SPAN=450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:28:8.1:89.1,8.1,0:22:11:-89.12:89.12
5	46708874	291914:2	T	]5:46659126]T	69	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=291914:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46659126(+)-5:46708874(-)__5_46697001_46722001D;SPAN=49748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	46736987	291959:2	A	]5:46565779]A	29	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=291959:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46565779(+)-5:46736987(-)__5_46721501_46746501D;SPAN=171208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:2:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	46783997	292044:2	A	A[5:46658868[	54	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=292044:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46658868(-)-5:46783997(+)__5_46770501_46795501D;SPAN=125129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55
5	46912885	292214:1	T	]5:47020460]T	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGACAGAAGCA;MAPQ=60;MATEID=292214:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_47015501_47040501_88C;SPAN=107575;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:21:4:-75.92:75.92
5	46926344	292248:1	C	[5:47075336[C	69	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=292248:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46926344(-)-5:47075336(-)__5_47064501_47089501D;SPAN=148992;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:3:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	47020460	292214:2	A	A[5:46912885[	75	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGACAGAAGCA;MAPQ=60;MATEID=292214:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_47015501_47040501_88C;SPAN=107575;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:21:4:-75.92:75.92
5	47075336	292248:2	C	[5:46926344[C	69	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=292248:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46926344(-)-5:47075336(-)__5_47064501_47089501D;SPAN=148992;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:3:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	47172599	847754:1	T	]19:24896904]T	41	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=847754:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:47172599(-)-19:24896904(+)__19_24892001_24917001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:54:41:41,0,93.8:0:17:-40.94:42.13
5	49623939	292697:2	G	G]1:123283955]	33	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=292697:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123283955(+)-5:49623939(+)__5_49612501_49637501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:0:11:-33.01:33.01
5	49691392	292720:1	C	]5:49693519]C	35	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=292720:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49691392(-)-5:49693519(+)__5_49686001_49711001D;SPAN=2127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63
5	49693479	292728:1	G	G[5:49702819[	20	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=292728:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49693479(+)-5:49702819(-)__5_49686001_49711001D;SPAN=9340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
5	49693519	292720:2	T	T[5:49691392[	35	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=292720:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49691392(-)-5:49693519(+)__5_49686001_49711001D;SPAN=2127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63
5	49702819	292728:2	T	]5:49693479]T	20	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=292728:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49693479(+)-5:49702819(-)__5_49686001_49711001D;SPAN=9340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
5	49723328	293173:1	C	]5:49895193]C	7	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=293173:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49723328(-)-5:49895193(+)__5_49882001_49907001D;SPAN=171865;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:68:7.4:7.4,0,162.5:0:8:-7.294:15.98
5	49770437	293175:1	G	]5:49886143]G	42	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=293175:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49770437(-)-5:49886143(+)__5_49882001_49907001D;SPAN=115706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
5	49800374	293088:1	T	T[5:49853433[	43	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=293088:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49800374(+)-5:49853433(-)__5_49833001_49858001D;SPAN=53059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:0:15:-43.8:43.8
5	49816583	293323:1	A	A[5:49957574[	33	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=293323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49816583(+)-5:49957574(-)__5_49955501_49980501D;SPAN=140991;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:0:11:-33.01:33.01
5	49853433	293088:2	A	]5:49800374]A	43	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293088:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49800374(+)-5:49853433(-)__5_49833001_49858001D;SPAN=53059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:0:15:-43.8:43.8
5	49853709	293181:1	T	T[5:49895540[	79	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293181:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49853709(+)-5:49895540(-)__5_49882001_49907001D;SPAN=41831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
5	49886143	293175:2	G	G[5:49770437[	42	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=293175:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49770437(-)-5:49886143(+)__5_49882001_49907001D;SPAN=115706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
5	49895193	293173:2	G	G[5:49723328[	7	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293173:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49723328(-)-5:49895193(+)__5_49882001_49907001D;SPAN=171865;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:68:7.4:7.4,0,162.5:0:8:-7.294:15.98
5	49895540	293181:2	G	]5:49853709]G	79	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=293181:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49853709(+)-5:49895540(-)__5_49882001_49907001D;SPAN=41831;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
5	49937653	293336:1	G	G[5:49958078[	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGAAAGAAG;MAPQ=60;MATEID=293336:2;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_5_49955501_49980501_848C;SPAN=20425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:9:12.6:138.6,12.6,0:40:12:-138.6:138.6
5	49957574	293323:2	T	]5:49816583]T	33	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=293323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49816583(+)-5:49957574(-)__5_49955501_49980501D;SPAN=140991;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:0:11:-33.01:33.01
5	49958078	293336:2	T	]5:49937653]T	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGAAAGAAG;MAPQ=60;MATEID=293336:1;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_5_49955501_49980501_848C;SPAN=20425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:9:12.6:138.6,12.6,0:40:12:-138.6:138.6
5	51925610	201766:2	C	[3:166722402[C	57	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=201766:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:166722402(-)-5:51925610(-)__3_166698001_166723001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:31:17.9:57.5,0,17.9:0:20:-58.24:58.24
5	53611921	686826:1	A	A]14:20254838]	36	PASS	DISC_MAPQ=48;EVDNC=ASDIS;INSERTION=CAACTT;MAPQ=60;MATEID=686826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20237001_20262001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:7:4:-35.86:35.86
5	53826784	294974:1	G	[5:53829682[G	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAAT;MAPQ=60;MATEID=294974:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_5_53826501_53851501_3C;SPAN=2898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:28:8.4:92.4,8.4,0:25:6:-92.42:92.42
5	53826933	294975:1	G	G]5:53829655]	85	PASS	EVDNC=ASSMB;INSERTION=CTAACTGAA;MAPQ=60;MATEID=294975:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_53826501_53851501_1C;SPAN=2722;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
5	53829655	294975:2	A	A]5:53826933]	85	PASS	EVDNC=ASSMB;INSERTION=CTAACTGAA;MAPQ=60;MATEID=294975:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_53826501_53851501_1C;SPAN=2722;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
5	53829682	294974:2	T	[5:53826784[T	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAAT;MAPQ=60;MATEID=294974:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_5_53826501_53851501_3C;SPAN=2898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:28:8.4:92.4,8.4,0:25:6:-92.42:92.42
5	56133424	295612:1	G	G[5:56134520[	82	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AGTGAGCCGAGATCGTGTCATTGCACTCCAGCCTGGGTGACAGAG;MAPQ=60;MATEID=295612:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_56129501_56154501_23C;SPAN=1096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:3:7.5:82.5,7.5,0:9:21:-82.52:82.52
5	56134520	295612:2	A	]5:56133424]A	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTGAGCCGAGATCGTGTCATTGCACTCCAGCCTGGGTGACAGAG;MAPQ=60;MATEID=295612:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_56129501_56154501_23C;SPAN=1096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:3:7.5:82.5,7.5,0:9:21:-82.52:82.52
5	56152290	295608:2	A	[1:150621245[A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=295608:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:150621245(-)-5:56152290(-)__5_56129501_56154501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29
5	58027770	296201:1	G	G[5:58037951[	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296201:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:58027770(+)-5:58037951(-)__5_58016001_58041001D;SPAN=10181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:5:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	58037951	296201:2	G	]5:58027770]G	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296201:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:58027770(+)-5:58037951(-)__5_58016001_58041001D;SPAN=10181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:5:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	58384174	296299:1	C	C[5:58390275[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAACAC;MAPQ=60;MATEID=296299:2;MATENM=2;NM=11;NUMPARTS=2;SCTG=c_5_58359001_58384001_4C;SPAN=6101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:0:10.8:118.8,10.8,0:27:18:-118.8:118.8
5	58390275	296299:2	A	]5:58384174]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAACAC;MAPQ=60;MATEID=296299:1;MATENM=11;NM=2;NUMPARTS=2;SCTG=c_5_58359001_58384001_4C;SPAN=6101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:0:10.8:118.8,10.8,0:27:18:-118.8:118.8
5	59692316	409711:1	T	[7:81172709[T	59	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=409711:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692316(-)-7:81172709(-)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:12:5.4:59.4,5.4,0:0:20:-59.41:59.41
5	59692516	409712:1	G	G]7:81172281]	25	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=409712:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692516(+)-7:81172281(+)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:40:25.1:25.1,0,74.6:0:11:-25.07:26.48
5	60193637	296744:1	A	A[5:60201074[	25	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=296744:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60193637(+)-5:60201074(-)__5_60196501_60221501D;SPAN=7437;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
5	60200548	296747:1	A	]5:60201294]A	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296747:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60200548(-)-5:60201294(+)__5_60196501_60221501D;SPAN=746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
5	60201074	296744:2	T	]5:60193637]T	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296744:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60193637(+)-5:60201074(-)__5_60196501_60221501D;SPAN=7437;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
5	60201294	296747:2	A	A[5:60200548[	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296747:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60200548(-)-5:60201294(+)__5_60196501_60221501D;SPAN=746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
5	60633808	296852:1	G	]5:60761656]G	92	PASS	EVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=296852:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_60760001_60785001_10C;SPAN=127848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42
5	60706002	296834:1	G	G[5:60707838[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296834:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60706002(+)-5:60707838(-)__5_60686501_60711501D;SPAN=1836;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:13:18.9:207.9,18.9,0:0:68:-208:208
5	60707838	296834:2	C	]5:60706002]C	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296834:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60706002(+)-5:60707838(-)__5_60686501_60711501D;SPAN=1836;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:13:18.9:207.9,18.9,0:0:68:-208:208
5	60761656	296852:2	G	G[5:60633808[	92	PASS	EVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=296852:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_60760001_60785001_10C;SPAN=127848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42
5	61453878	297015:1	C	C[5:61458570[	56	PASS	EVDNC=ASSMB;INSERTION=AGTGAGG;MAPQ=60;MATEID=297015:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_61446001_61471001_20C;SPAN=4692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78
5	61458570	297015:2	C	]5:61453878]C	56	PASS	EVDNC=ASSMB;INSERTION=AGTGAGG;MAPQ=60;MATEID=297015:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_61446001_61471001_20C;SPAN=4692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78
5	62354497	297206:1	T	]5:62433917]T	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=297206:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_62426001_62451001_9C;SPAN=79420;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:16:21:-89.12:89.12
5	62433917	297206:2	G	G[5:62354497[	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=297206:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_62426001_62451001_9C;SPAN=79420;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:16:21:-89.12:89.12
5	63277564	297467:1	C	C[5:63614896[	32	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=297467:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:63277564(+)-5:63614896(-)__5_63602001_63627001D;SPAN=337332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
5	63614896	297467:2	C	]5:63277564]C	32	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=297467:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:63277564(+)-5:63614896(-)__5_63602001_63627001D;SPAN=337332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
5	65172244	297711:2	C	C]2:68687723]	26	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=297711:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:68687723(+)-5:65172244(+)__5_65170001_65195001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7
5	73537389	299585:1	T	]5:73672251]T	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=299585:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:73537389(-)-5:73672251(+)__5_73671501_73696501D;SPAN=134862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
5	73672251	299585:2	A	A[5:73537389[	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=299585:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:73537389(-)-5:73672251(+)__5_73671501_73696501D;SPAN=134862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
5	77477364	300231:1	A	A[5:77611313[	23	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=300231:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:77477364(+)-5:77611313(-)__5_77469001_77494001D;SPAN=133949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
5	77611313	300231:2	A	]5:77477364]A	23	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=300231:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:77477364(+)-5:77611313(-)__5_77469001_77494001D;SPAN=133949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
5	78814094	300539:1	T	T[5:78816047[	72	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=300539:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:78814094(+)-5:78816047(-)__5_78792001_78817001D;SPAN=1953;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	78816047	300539:2	T	]5:78814094]T	72	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=300539:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:78814094(+)-5:78816047(-)__5_78792001_78817001D;SPAN=1953;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	78980940	300584:1	T	T[5:78981250[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTCTAGTTCTT;MAPQ=60;MATEID=300584:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_5_78963501_78988501_19C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:15:9.9:108.9,9.9,0:25:15:-108.9:108.9
5	78981250	300584:2	G	]5:78980940]G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTCTAGTTCTT;MAPQ=60;MATEID=300584:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_5_78963501_78988501_19C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:15:9.9:108.9,9.9,0:25:15:-108.9:108.9
5	81712362	301309:1	A	A[5:81712619[	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATAAAGATTACA;MAPQ=60;MATEID=301309:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_81707501_81732501_9C;SPAN=257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:14:4.8:52.8,4.8,0:18:0:-52.81:52.81
5	81712619	301309:2	A	]5:81712362]A	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATAAAGATTACA;MAPQ=60;MATEID=301309:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_81707501_81732501_9C;SPAN=257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:14:4.8:52.8,4.8,0:18:0:-52.81:52.81
5	89611142	302952:1	A	]5:89618185]A	16	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=52;MATEID=302952:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_89596501_89621501_23C;SPAN=7043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:36:16.4:16.4,0,72.5:8:0:-16.29:18.4
5	89618185	302952:2	T	T[5:89611142[	16	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=52;MATEID=302952:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_89596501_89621501_23C;SPAN=7043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:36:16.4:16.4,0,72.5:8:0:-16.29:18.4
5	91204065	303333:1	A	A[5:91206278[	79	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=303333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:91204065(+)-5:91206278(-)__5_91189001_91214001D;SPAN=2213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
5	91206278	303333:2	A	]5:91204065]A	79	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=303333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:91204065(+)-5:91206278(-)__5_91189001_91214001D;SPAN=2213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
5	91278320	303358:1	C	]5:91280018]C	61	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=303358:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_8C;SPAN=1698;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:28:8.6:61.4,0,8.6:15:13:-63.69:63.69
5	91278885	303359:1	T	T[5:91279170[	82	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCTCTCTTT;MAPQ=60;MATEID=303359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_27C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:21:7.5:82.5,7.5,0:15:16:-82.52:82.52
5	91279170	303359:2	T	]5:91278885]T	82	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TCTCTCTTT;MAPQ=60;MATEID=303359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_27C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:21:7.5:82.5,7.5,0:15:16:-82.52:82.52
5	91280018	303358:2	C	C[5:91278320[	61	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=303358:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_8C;SPAN=1698;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:28:8.6:61.4,0,8.6:15:13:-63.69:63.69
5	94472477	303817:2	G	[5:11655906[G	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=303817:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_94472001_94497001_10C;SPAN=82816571;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:6:4:-24.74:24.74
5	98524537	916269:1	A	A]22:28669971]	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916269:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:98524537(+)-22:28669971(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:74:15.5:15.5,0,170.6:0:11:-15.51:23.17
5	99009529	304939:1	G	G[5:99011777[	92	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=304939:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:99009529(+)-5:99011777(-)__5_99004501_99029501D;SPAN=2248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:4:8.4:92.4,8.4,0:0:31:-92.42:92.42
5	99011777	304939:2	C	]5:99009529]C	92	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=304939:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:99009529(+)-5:99011777(-)__5_99004501_99029501D;SPAN=2248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:4:8.4:92.4,8.4,0:0:31:-92.42:92.42
5	99532345	305053:1	T	T[5:99533288[	85	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGGTGAAACCCCGTCTCTACTAAAAATACAAAAATT;MAPQ=60;MATEID=305053:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_5_99519001_99544001_64C;SPAN=943;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:9:7.8:85.8,7.8,0:15:14:-85.82:85.82
5	99533288	305053:2	T	]5:99532345]T	85	PASS	DISC_MAPQ=5;EVDNC=ASDIS;HOMSEQ=TGGTGAAACCCCGTCTCTACTAAAAATACAAAAATT;MAPQ=60;MATEID=305053:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_5_99519001_99544001_64C;SPAN=943;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:9:7.8:85.8,7.8,0:15:14:-85.82:85.82
5	103726615	305899:1	G	G[5:103726926[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGTG;MAPQ=60;MATEID=305899:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_103708501_103733501_9C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:19:8.4:92.4,8.4,0:21:11:-92.42:92.42
5	103726926	305899:2	T	]5:103726615]T	92	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TGTG;MAPQ=60;MATEID=305899:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_103708501_103733501_9C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:19:8.4:92.4,8.4,0:21:11:-92.42:92.42
5	104518587	306071:1	A	A[5:104524626[	99	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAATTATTAA;MAPQ=60;MATEID=306071:2;MATENM=9;NM=2;NUMPARTS=2;SCTG=c_5_104517001_104542001_2C;SPAN=6039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:23:11.4:125.4,11.4,0:41:0:-125.4:125.4
5	104524626	306071:2	A	]5:104518587]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AATAAAATTATTAA;MAPQ=60;MATEID=306071:1;MATENM=2;NM=9;NUMPARTS=2;SCTG=c_5_104517001_104542001_2C;SPAN=6039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:23:11.4:125.4,11.4,0:41:0:-125.4:125.4
5	104579639	306147:1	C	]5:104775023]C	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=306147:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:104579639(-)-5:104775023(+)__5_104762001_104787001D;SPAN=195384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
5	104775023	306147:2	A	A[5:104579639[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=306147:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:104579639(-)-5:104775023(+)__5_104762001_104787001D;SPAN=195384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
5	106667444	306575:1	A	]5:106673010]A	29	PASS	EVDNC=ASSMB;INSERTION=GAAAATATAAAATG;MAPQ=60;MATEID=306575:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_106673001_106698001_18C;SPAN=5566;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
5	106673010	306575:2	A	A[5:106667444[	29	PASS	EVDNC=ASSMB;INSERTION=GAAAATATAAAATG;MAPQ=60;MATEID=306575:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_106673001_106698001_18C;SPAN=5566;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
5	106989148	306679:1	C	C[5:106990742[	72	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=306679:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:106989148(+)-5:106990742(-)__5_106967001_106992001D;SPAN=1594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:5:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	106990742	306679:2	C	]5:106989148]C	72	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=306679:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:106989148(+)-5:106990742(-)__5_106967001_106992001D;SPAN=1594;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:5:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	107551672	306949:1	A	]5:108008819]A	34	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=306949:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_107996001_108021001_18C;SPAN=457147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:8:9:-34.76:34.76
5	108008819	306949:2	A	A[5:107551672[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=306949:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_107996001_108021001_18C;SPAN=457147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:8:9:-34.76:34.76
5	110659597	307504:2	T	T]1:29279188]	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=307504:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29279188(+)-5:110659597(+)__5_110642001_110667001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
5	112455705	307967:1	T	]5:113062140]T	39	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=TGGAGCTAAAGATG;MAPQ=60;MATEID=307967:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_113043001_113068001_5C;SPAN=606435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:13:10:-40.18:40.18
5	112977181	307978:1	A	]5:113116101]A	32	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TCCTTCCCCGC;MAPQ=60;MATEID=307978:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_113092001_113117001_1C;SPAN=138920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:8:6:-33.83:33.83
5	113062140	307967:2	T	T[5:112455705[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGGAGCTAAAGATG;MAPQ=60;MATEID=307967:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_113043001_113068001_5C;SPAN=606435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:13:10:-40.18:40.18
5	113116101	307978:2	G	G[5:112977181[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCCTTCCCCGC;MAPQ=60;MATEID=307978:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_113092001_113117001_1C;SPAN=138920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:8:6:-33.83:33.83
5	115420818	308409:1	T	T[5:115422193[	56	PASS	EVDNC=ASSMB;HOMSEQ=CTATCTCTTGTTTTCTT;MAPQ=60;MATEID=308409:2;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_5_115419501_115444501_4C;SPAN=1375;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
5	115422193	308409:2	C	]5:115420818]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CTATCTCTTGTTTTCTT;MAPQ=60;MATEID=308409:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_5_115419501_115444501_4C;SPAN=1375;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
5	115842122	57747:2	C	C]1:214483362]	28	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=57747:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:214483362(+)-5:115842122(+)__1_214473001_214498001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
5	115903112	308531:1	T	T[5:115913380[	25	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=308531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:115903112(+)-5:115913380(-)__5_115885001_115910001D;SPAN=10268;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
5	115913380	308531:2	C	]5:115903112]C	25	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=308531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:115903112(+)-5:115913380(-)__5_115885001_115910001D;SPAN=10268;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
5	117973459	308983:1	G	]5:117973635]G	13	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=308983:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_117967501_117992501_9C;SPAN=176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
5	117973635	308983:2	C	C[5:117973459[	13	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=308983:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_117967501_117992501_9C;SPAN=176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
5	119702489	309320:1	G	G[5:119705996[	46	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=309320:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:119702489(+)-5:119705996(-)__5_119682501_119707501D;SPAN=3507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
5	119705996	309320:2	G	]5:119702489]G	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=309320:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:119702489(+)-5:119705996(-)__5_119682501_119707501D;SPAN=3507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
5	120044567	309394:1	G	G[5:120046985[	62	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=309394:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:120044567(+)-5:120046985(-)__5_120025501_120050501D;SPAN=2418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:5:5.7:62.7,5.7,0:0:21:-62.72:62.72
5	120046985	309394:2	T	]5:120044567]T	62	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=309394:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:120044567(+)-5:120046985(-)__5_120025501_120050501D;SPAN=2418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:5:5.7:62.7,5.7,0:0:21:-62.72:62.72
5	128071820	310985:1	C	C[5:128075224[	75	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=310985:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:128071820(+)-5:128075224(-)__5_128061501_128086501D;SPAN=3404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	128075224	310985:2	A	]5:128071820]A	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=310985:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:128071820(+)-5:128075224(-)__5_128061501_128086501D;SPAN=3404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	133583356	311921:1	A	A[5:133589299[	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=311921:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:133583356(+)-5:133589299(-)__5_133574001_133599001D;SPAN=5943;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:6:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	133589299	311921:2	A	]5:133583356]A	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=311921:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:133583356(+)-5:133589299(-)__5_133574001_133599001D;SPAN=5943;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:6:6.9:75.9,6.9,0:0:25:-75.92:75.92
5	137519022	312619:1	G	G[5:137520709[	69	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=312619:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:137519022(+)-5:137520709(-)__5_137518501_137543501D;SPAN=1687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	137520709	312619:2	G	]5:137519022]G	69	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=312619:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:137519022(+)-5:137520709(-)__5_137518501_137543501D;SPAN=1687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
5	139452687	313069:1	N	N[5:139453686[	42	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=313069:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:139452687(+)-5:139453686(-)__5_139454001_139479001D;SPAN=999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:0:3.9:42.9,3.9,0:0:14:-42.91:42.91
5	139453686	313069:2	T	]5:139452687]T	42	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=313069:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:139452687(+)-5:139453686(-)__5_139454001_139479001D;SPAN=999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:0:3.9:42.9,3.9,0:0:14:-42.91:42.91
5	141632067	313544:1	A	]5:142199822]A	29	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=313544:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632067(-)-5:142199822(+)__5_142198001_142223001D;SPAN=567755;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	141632296	313545:1	A	A[5:142199971[	29	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=313545:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632296(+)-5:142199971(-)__5_142198001_142223001D;SPAN=567675;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	142077508	677548:1	A	A[13:81793562[	46	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=677548:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:142077508(+)-13:81793562(-)__13_81781001_81806001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
5	142199822	313544:2	T	T[5:141632067[	29	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=313544:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632067(-)-5:142199822(+)__5_142198001_142223001D;SPAN=567755;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	142199971	313545:2	A	]5:141632296]A	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=313545:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632296(+)-5:142199971(-)__5_142198001_142223001D;SPAN=567675;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
5	144132924	313823:1	A	]5:144135488]A	49	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=313823:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_144133501_144158501_0C;SPAN=2564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:17:0:-49.51:49.51
5	144133302	313820:1	G	G[5:144135483[	89	PASS	EVDNC=ASSMB;INSERTION=GAATAAGCTC;MAPQ=60;MATEID=313820:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_144109001_144134001_1C;SPAN=2181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:21:8.1:89.1,8.1,0:29:0:-89.12:89.12
5	144135483	313820:2	T	]5:144133302]T	89	PASS	EVDNC=ASSMB;INSERTION=GAATAAGCTC;MAPQ=60;MATEID=313820:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_144109001_144134001_1C;SPAN=2181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:21:8.1:89.1,8.1,0:29:0:-89.12:89.12
5	144135488	313823:2	G	G[5:144132924[	49	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=313823:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_144133501_144158501_0C;SPAN=2564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:17:0:-49.51:49.51
5	149173741	603835:1	G	[11:99733408[G	42	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=G;MAPQ=45;MATEID=603835:2;MATENM=13;NM=0;NUMPARTS=2;SCTG=c_11_99715001_99740001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:9:6:-42.91:42.91
5	152076983	315337:1	A	A[5:152082886[	71	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=315337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152076983(+)-5:152082886(-)__5_152071501_152096501D;SPAN=5903;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:40:28.4:71.3,0,28.4:0:25:-72.23:72.23
5	152082886	315337:2	A	]5:152076983]A	71	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=315337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152076983(+)-5:152082886(-)__5_152071501_152096501D;SPAN=5903;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:40:28.4:71.3,0,28.4:0:25:-72.23:72.23
5	152131193	315357:1	T	]5:152135135]T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGACAA;MAPQ=60;MATEID=315357:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_152120501_152145501_9C;SPAN=3942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:36:6.6:102.3,6.6,0:22:23:-102.8:102.8
5	152131457	315358:1	A	A[5:152135133[	92	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAA;MAPQ=60;MATEID=315358:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=AA;SCTG=c_5_152120501_152145501_8C;SPAN=3676;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:30:8.4:92.4,8.4,0:24:9:-92.37:92.37
5	152131577	315360:1	C	C[5:152139302[	59	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=315360:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152131577(+)-5:152139302(-)__5_152120501_152145501D;SPAN=7725;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41
5	152135133	315358:2	C	]5:152131457]C	92	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAA;MAPQ=60;MATEID=315358:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=AA;SCTG=c_5_152120501_152145501_8C;SPAN=3676;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:30:8.4:92.4,8.4,0:24:9:-92.37:92.37
5	152135135	315357:2	A	A[5:152131193[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGACAA;MAPQ=60;MATEID=315357:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_152120501_152145501_9C;SPAN=3942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:36:6.6:102.3,6.6,0:22:23:-102.8:102.8
5	152135246	315361:1	T	T[5:152139304[	59	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCT;MAPQ=60;MATEID=315361:2;MATENM=4;NM=1;NUMPARTS=3;SCTG=c_5_152120501_152145501_8C;SPAN=4058;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41
5	152139302	315360:2	G	]5:152131577]G	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=315360:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152131577(+)-5:152139302(-)__5_152120501_152145501D;SPAN=7725;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41
5	152139304	315361:2	T	]5:152135246]T	59	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCT;MAPQ=60;MATEID=315361:1;MATENM=1;NM=4;NUMPARTS=3;SCTG=c_5_152120501_152145501_8C;SPAN=4058;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41
5	155760325	316002:1	N	N[5:155761324[	49	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGCATCACCCTCTCCATCACCCTATTCATCATCCTCTCCATCATCCTCATCATCACTCTC;MAPQ=60;MATEID=316002:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_155746501_155771501_7C;SPAN=999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:3:4.5:49.5,4.5,0:7:12:-49.51:49.51
5	155761324	316002:2	N	]5:155760325]N	49	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AGCATCACCCTCTCCATCACCCTATTCATCATCCTCTCCATCATCCTCATCATCACTCTC;MAPQ=60;MATEID=316002:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_155746501_155771501_7C;SPAN=999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:3:4.5:49.5,4.5,0:7:12:-49.51:49.51
5	161161852	317139:1	T	T[5:161163317[	39	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=317139:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:161161852(+)-5:161163317(-)__5_161161001_161186001D;SPAN=1465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61
5	161163317	317139:2	T	]5:161161852]T	39	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=317139:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:161161852(+)-5:161163317(-)__5_161161001_161186001D;SPAN=1465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61
5	167374629	318555:1	T	T[5:167384020[	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=318555:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_167384001_167409001_4C;SPAN=9391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
5	167384020	318555:2	T	]5:167374629]T	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=318555:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_167384001_167409001_4C;SPAN=9391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
5	169468974	318970:2	A	]1:157699943]A	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=318970:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_169466501_169491501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37
5	170833608	321444:1	G	[5:178756116[G	72	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=321444:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:170833608(-)-5:178756116(-)__5_178752001_178777001D;SPAN=7922508;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	172787216	319739:1	A	]5:172787320]A	68	PASS	EVDNC=ASSMB;HOMSEQ=AGAGACACACA;MAPQ=60;MATEID=319739:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_172774001_172799001_9C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:61:68.9:68.9,0,82.1:26:0:-68.68:68.78
5	172787320	319739:2	A	A[5:172787216[	68	PASS	EVDNC=ASSMB;HOMSEQ=AGAGACACACA;MAPQ=60;MATEID=319739:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_172774001_172799001_9C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:61:68.9:68.9,0,82.1:26:0:-68.68:68.78
5	173783944	113403:1	A	A[7:44911156[	30	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AAAGAAA;MAPQ=60;MATEID=113403:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AAAGAAAGAAAG;SCTG=c_2_136293501_136318501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:0:6.2:30.3,6.2,0:24:0:-30.37:30.37
5	176306387	832137:1	C	C]18:57714588]	82	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=832137:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:27:7:-82.52:82.52
5	176306407	832138:1	A	[18:57714342[A	99	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=832138:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_57697501_57722501_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:15:11.7:128.7,11.7,0:25:23:-128.7:128.7
5	178095245	321220:1	C	C[5:178096986[	27	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=321220:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178095245(+)-5:178096986(-)__5_178090501_178115501D;SPAN=1741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:0:12:-27.24:28.84
5	178096986	321220:2	T	]5:178095245]T	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=321220:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178095245(+)-5:178096986(-)__5_178090501_178115501D;SPAN=1741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:0:12:-27.24:28.84
5	178727280	321428:1	C	[5:178866051[C	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=321428:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178727280(-)-5:178866051(-)__5_178703001_178728001D;SPAN=138771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
5	178756116	321444:2	T	[5:170833608[T	72	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=321444:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:170833608(-)-5:178756116(-)__5_178752001_178777001D;SPAN=7922508;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62
5	178866051	321428:2	A	[5:178727280[A	22	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=321428:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178727280(-)-5:178866051(-)__5_178703001_178728001D;SPAN=138771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
5	179299294	321578:1	C	C]9:112100475]	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=321578:2;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_5_179291001_179316001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:12:2:-42.91:42.91
5	180437137	322042:1	C	]5:180437234]C	72	PASS	EVDNC=ASSMB;HOMSEQ=CAGCCAATGGTCCAGCAGCACCAGCCCAGGGCAGCC;MAPQ=60;MATEID=322042:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_5_180418001_180443001_13C;SPAN=97;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:49:49.1:72.2,0,49.1:26:0:-72.24:72.24
5	180437234	322042:2	C	C[5:180437137[	72	PASS	EVDNC=ASSMB;HOMSEQ=CAGCCAATGGTCCAGCAGCACCAGCCCAGGGCAGCC;MAPQ=60;MATEID=322042:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_5_180418001_180443001_13C;SPAN=97;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:49:49.1:72.2,0,49.1:26:0:-72.24:72.24
6	150718	322397:2	T	T[5:15864[	99	PASS	DISC_MAPQ=5;EVDNC=TSI_L;HOMSEQ=CTT;MAPQ=60;MATEID=322397:1;MATENM=5;NM=6;NUMPARTS=3;REPSEQ=TTT;SCTG=c_6_147001_172001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:30:10.8:118.8,10.8,0:32:13:-118.8:118.8
6	666488	322633:1	A	A[6:667821[	89	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=322633:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:666488(+)-6:667821(-)__6_661501_686501D;SPAN=1333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12
6	667821	322633:2	T	]6:666488]T	89	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=322633:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:666488(+)-6:667821(-)__6_661501_686501D;SPAN=1333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12
6	773629	322688:1	T	T[6:774803[	99	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=322688:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_6_759501_784501_14C;SPAN=1174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7
6	774803	322688:2	C	]6:773629]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=322688:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_6_759501_784501_14C;SPAN=1174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7
6	857170	322747:1	C	C[6:857563[	79	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=322747:2;MATENM=4;NM=8;NUMPARTS=2;SCTG=c_6_857501_882501_13C;SPAN=393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:3:7.2:79.2,7.2,0:26:0:-79.22:79.22
6	857563	322747:2	C	]6:857170]C	79	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=322747:1;MATENM=8;NM=4;NUMPARTS=2;SCTG=c_6_857501_882501_13C;SPAN=393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:3:7.2:79.2,7.2,0:26:0:-79.22:79.22
6	994018	322842:1	T	]6:994259]T	53	PASS	EVDNC=ASSMB;HOMSEQ=TATGTATGTATGTATGTATGTATGTATGTAT;MAPQ=60;MATEID=322842:2;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_6_980001_1005001_17C;SPAN=241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:47:53:53,0,62.9:20:0:-52.81:52.88
6	994259	322842:2	T	T[6:994018[	53	PASS	EVDNC=ASSMB;HOMSEQ=TATGTATGTATGTATGTATGTATGTATGTAT;MAPQ=60;MATEID=322842:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_6_980001_1005001_17C;SPAN=241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:47:53:53,0,62.9:20:0:-52.81:52.88
6	1051554	322871:1	G	]6:1051737]G	57	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=322871:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_1029001_1054001_3C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:67:57.2:57.2,0,110:23:0:-57.09:58.06
6	1051737	322871:2	T	T[6:1051554[	57	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=322871:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_1029001_1054001_3C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:67:57.2:57.2,0,110:23:0:-57.09:58.06
6	3145215	323598:1	T	T[6:3146275[	35	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGTGCTGGTTTGGGTCGAGTGCTGGTTCGGGTTGGAGTGCTGGTTCGGGTGGAGTGCTGATTCGGGGTGGAGTGCTGGT;MAPQ=60;MATEID=323598:2;MATENM=4;NM=4;NUMPARTS=2;SCTG=c_6_3136001_3161001_57C;SPAN=1060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:2:12:-37.11:37.11
6	3146275	323598:2	G	]6:3145215]G	35	PASS	DISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=GAGTGCTGGTTTGGGTCGAGTGCTGGTTCGGGTTGGAGTGCTGGTTCGGGTGGAGTGCTGATTCGGGGTGGAGTGCTGGT;MAPQ=60;MATEID=323598:1;MATENM=4;NM=4;NUMPARTS=2;SCTG=c_6_3136001_3161001_57C;SPAN=1060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:2:12:-37.11:37.11
6	3156553	323610:1	C	C[6:3180181[	22	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=323610:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:3156553(+)-6:3180181(-)__6_3160501_3185501D;SPAN=23628;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
6	3180181	323610:2	G	]6:3156553]G	22	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=323610:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:3156553(+)-6:3180181(-)__6_3160501_3185501D;SPAN=23628;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
6	4050023	323982:1	T	T[6:4050327[	60	PASS	EVDNC=ASSMB;HOMSEQ=GGAAACAGTTGTTTTT;MAPQ=60;MATEID=323982:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_4042501_4067501_93C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:31:14.6:60.8,0,14.6:21:0:-61.93:61.93
6	4050327	323982:2	G	]6:4050023]G	60	PASS	EVDNC=ASSMB;HOMSEQ=GGAAACAGTTGTTTTT;MAPQ=60;MATEID=323982:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_4042501_4067501_93C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:31:14.6:60.8,0,14.6:21:0:-61.93:61.93
6	5037015	324390:1	T	T[6:5038953[	82	PASS	EVDNC=ASSMB;INSERTION=AAAATCTGCTTC;MAPQ=60;MATEID=324390:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_6_5022501_5047501_11C;SPAN=1938;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:16:7.5:82.5,7.5,0:27:0:-82.52:82.52
6	5038953	324390:2	A	]6:5037015]A	82	PASS	EVDNC=ASSMB;INSERTION=AAAATCTGCTTC;MAPQ=60;MATEID=324390:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_6_5022501_5047501_11C;SPAN=1938;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:16:7.5:82.5,7.5,0:27:0:-82.52:82.52
6	5179525	324454:1	T	T[6:5380194[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=324454:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5179525(+)-6:5380194(-)__6_5169501_5194501D;SPAN=200669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
6	5380194	324454:2	G	]6:5179525]G	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=324454:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5179525(+)-6:5380194(-)__6_5169501_5194501D;SPAN=200669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
6	5852479	661746:1	T	[13:21325351[T	26	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=661746:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5852479(-)-13:21325351(-)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
6	5853533	661748:1	A	A]13:21325323]	69	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=661748:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5853533(+)-13:21325323(+)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:6:6.3:69.3,6.3,0:0:23:-69.32:69.32
6	5898216	324659:1	A	A[6:5898643[	63	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=324659:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_5880001_5905001_75C;SPAN=427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:33:17.3:63.5,0,17.3:22:0:-64.61:64.61
6	5898643	324659:2	C	]6:5898216]C	63	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=324659:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_5880001_5905001_75C;SPAN=427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:33:17.3:63.5,0,17.3:22:0:-64.61:64.61
6	6008564	324826:1	C	]6:6149684]C	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=324826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6149501_6174501_31C;SPAN=141120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:7:5:-30.15:30.15
6	6068616	324764:1	T	T[6:6068946[	0	PASS	EVDNC=ASSMB;HOMSEQ=CCCTCTTTTTCT;MAPQ=60;MATEID=324764:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6051501_6076501_146C;SPAN=330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:264:27.7:0,27.7,719.5:14:0:27.99:22.92
6	6068946	324764:2	C	]6:6068616]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CCCTCTTTTTCT;MAPQ=60;MATEID=324764:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6051501_6076501_146C;SPAN=330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:264:27.7:0,27.7,719.5:14:0:27.99:22.92
6	6149684	324826:2	T	T[6:6008564[	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=324826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6149501_6174501_31C;SPAN=141120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:7:5:-30.15:30.15
6	8227706	325594:1	T	T[6:8228009[	40	PASS	EVDNC=ASSMB;HOMSEQ=TACTGTGAAGTTTTTT;MAPQ=60;MATEID=325594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_8207501_8232501_120C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
6	8228009	325594:2	T	]6:8227706]T	40	PASS	EVDNC=ASSMB;HOMSEQ=TACTGTGAAGTTTTTT;MAPQ=60;MATEID=325594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_8207501_8232501_120C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
6	9179635	326114:1	T	]6:9180042]T	31	PASS	EVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=25;MATEID=326114:2;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_6_9163001_9188001_16C;SPAN=407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1
6	9180042	326114:2	T	T[6:9179635[	31	PASS	EVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=326114:1;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_6_9163001_9188001_16C;SPAN=407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1
6	9347213	732153:1	G	G[15:55959268[	10	PASS	EVDNC=ASSMB;HOMSEQ=TTAG;MAPQ=60;MATEID=732153:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55958001_55983001_95C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:44:10.7:10.7,0,99.8:7:0:-10.74:14.97
6	9517473	326244:1	A	]6:9517558]A	50	PASS	EVDNC=ASSMB;INSERTION=TTATAT;MAPQ=60;MATEID=326244:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_9506001_9531001_35C;SPAN=85;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:89:50.9:50.9,0,173:23:0:-50.91:54.64
6	9517558	326244:2	A	A[6:9517473[	50	PASS	EVDNC=ASSMB;INSERTION=TTATAT;MAPQ=60;MATEID=326244:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_9506001_9531001_35C;SPAN=85;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:89:50.9:50.9,0,173:23:0:-50.91:54.64
6	13128170	988636:1	C	C]Un_KN707756v1_decoy:4877]	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988636:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_607_1_4877_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:11:0:-33.01:33.01
6	13128174	327574:1	C	]9:21841795]C	49	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ATCACATCACAGGACTCTTTGCAGACATCCCCCAGCATCAGCTCAGACAGAGCCTGTTGCCCTGCTGAGTGGCTAGACCCAGAAGAGCAATAACAGTCACTGCAGTCCAGGTCTCAAGAAGCCCCATCCCTAGGGGAAGGGGGAGAGCACAACATCAAGGGGTCACCCCTTGGGACAAGAAAATCTGAACAGCAGCCCTTGAGTTTCAAACTTCTC;INSERTION=ACTTCTC;MAPQ=60;MATEID=327574:2;MATENM=8;NM=0;NUMPARTS=4;REPSEQ=CTCT;SCTG=c_6_13107501_13132501_88C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:13:6:-49.51:49.51
6	13128174	988637:1	C	[Un_KN707756v1_decoy:1[C	36	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988637:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_607_1_4877_0C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:4:3.3:36.3,3.3,0:12:0:-36.31:36.31
6	13191316	812584:1	A	A[17:66641155[	40	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=812584:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:13191316(+)-17:66641155(-)__17_66640001_66665001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:0:15:-39.96:39.98
6	13434242	327696:1	C	]6:13434601]C	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGAAGTCAAGTGCAGGGCCTTATGGGAACACAGAAGTCAAGTGCAGGGC;MAPQ=60;MATEID=327696:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_13426001_13451001_3C;SPAN=359;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:56:27.2:27.2,0,113:11:2:-27.17:30.18
6	13434601	327696:2	C	C[6:13434242[	27	PASS	DISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=CACAGAAGTCAAGTGCAGGGCCTTATGGGAACACAGAAGTCAAGTGCAGGGC;MAPQ=60;MATEID=327696:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_13426001_13451001_3C;SPAN=359;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:56:27.2:27.2,0,113:11:2:-27.17:30.18
6	17099662	328908:1	A	]6:17320764]A	48	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=328908:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_17076501_17101501_22C;SPAN=221102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68
6	17320764	328908:2	A	A[6:17099662[	48	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=328908:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_17076501_17101501_22C;SPAN=221102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68
6	18401859	329492:1	C	C[6:18402637[	92	PASS	EVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=329492:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_18399501_18424501_13C;SPAN=778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:31:0:-92.42:92.42
6	18402637	329492:2	C	]6:18401859]C	92	PASS	EVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=329492:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_18399501_18424501_13C;SPAN=778;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:31:0:-92.42:92.42
6	19423383	329861:1	T	T[6:19423606[	56	PASS	EVDNC=ASSMB;HOMSEQ=TGCATTGCCTTT;MAPQ=60;MATEID=329861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19404001_19429001_69C;SPAN=223;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
6	19423606	329861:2	T	]6:19423383]T	56	PASS	EVDNC=ASSMB;HOMSEQ=TGCATTGCCTTT;MAPQ=60;MATEID=329861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19404001_19429001_69C;SPAN=223;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38
6	19764886	330018:1	A	[14:76216190[A	92	PASS	DISC_MAPQ=4;EVDNC=ASDIS;INSERTION=G;MAPQ=19;MATEID=330018:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_3C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:28:15:-92.42:92.42
6	19764894	330019:1	G	G[6:19770954[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAAAAACTAACTGG;MAPQ=60;MATEID=330019:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_19747001_19772001_11C;SPAN=6060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:30:887:99:0,150,2535:13:22:150.3:43.18
6	19770954	330019:2	A	]6:19764894]A	0	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AGAAAAAAAAACTAACTGG;MAPQ=60;MATEID=330019:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_11C;SPAN=6060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:30:887:99:0,150,2535:13:22:150.3:43.18
6	20765147	330418:1	T	T[6:20765456[	74	PASS	EVDNC=ASSMB;HOMSEQ=GGTTACATTCTT;MAPQ=60;MATEID=330418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_20751501_20776501_118C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:30:1.4:74,0,1.4:25:0:-78.37:78.37
6	20765456	330418:2	G	]6:20765147]G	74	PASS	EVDNC=ASSMB;HOMSEQ=GGTTACATTCTT;MAPQ=60;MATEID=330418:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_20751501_20776501_118C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:30:1.4:74,0,1.4:25:0:-78.37:78.37
6	21205807	330582:1	A	A[6:21206084[	82	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACA;MAPQ=60;MATEID=330582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21192501_21217501_51C;SPAN=277;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:23:7.5:82.5,7.5,0:22:8:-82.52:82.52
6	21206084	330582:2	G	]6:21205807]G	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACA;MAPQ=60;MATEID=330582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21192501_21217501_51C;SPAN=277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:23:7.5:82.5,7.5,0:22:8:-82.52:82.52
6	21456465	330678:2	A	A[4:183247605[	23	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTATATATACTATATATA;MAPQ=60;MATEID=330678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21437501_21462501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:7:3:-24.05:24.05
6	22052541	330896:1	C	C[6:22053499[	79	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=330896:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22050001_22075001_4C;SPAN=958;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68
6	22053499	330896:2	C	]6:22052541]C	79	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=330896:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22050001_22075001_4C;SPAN=958;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68
6	22782439	331166:1	T	T[6:22782745[	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGTTTGGCAATTATTT;MAPQ=60;MATEID=331166:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22760501_22785501_46C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:29:4.8:82.5,4.8,0:17:10:-83.85:83.85
6	22782745	331166:2	C	]6:22782439]C	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGTTTGGCAATTATTT;MAPQ=60;MATEID=331166:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22760501_22785501_46C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:29:4.8:82.5,4.8,0:17:10:-83.85:83.85
6	22832898	331189:1	A	A[6:22833431[	8	PASS	EVDNC=ASSMB;INSERTION=CGCTCTAA;MAPQ=60;MATEID=331189:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_22809501_22834501_21C;SPAN=533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73
6	22833431	331189:2	C	]6:22832898]C	8	PASS	EVDNC=ASSMB;INSERTION=CGCTCTAA;MAPQ=60;MATEID=331189:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_22809501_22834501_21C;SPAN=533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73
6	23734339	331626:1	T	]6:23758485]T	29	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=331626:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:23734339(-)-6:23758485(+)__6_23716001_23741001D;SPAN=24146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
6	23743031	331638:1	T	T[6:23745718[	62	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=331638:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_6_23740501_23765501_45C;SPAN=2687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21
6	23745718	331638:2	G	]6:23743031]G	62	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=331638:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_6_23740501_23765501_45C;SPAN=2687;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21
6	23758485	331626:2	C	C[6:23734339[	29	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=331626:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:23734339(-)-6:23758485(+)__6_23716001_23741001D;SPAN=24146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
6	24811736	332224:1	A	A[6:24817721[	79	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=332224:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:24811736(+)-6:24817721(-)__6_24794001_24819001D;SPAN=5985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
6	24817721	332224:2	T	]6:24811736]T	79	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=332224:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:24811736(+)-6:24817721(-)__6_24794001_24819001D;SPAN=5985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
6	26518278	332830:1	A	A[6:26518585[	4	PASS	EVDNC=ASSMB;HOMSEQ=GTGATCCACCCGCCTCGGCCTCCCAAA;MAPQ=60;MATEID=332830:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_26509001_26534001_11C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:30:4.7:4.7,0,70.7:4:0:-4.771:8.22
6	26518585	332830:2	G	]6:26518278]G	4	PASS	EVDNC=ASSMB;HOMSEQ=GTGATCCACCCGCCTCGGCCTCCCAAA;MAPQ=60;MATEID=332830:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_26509001_26534001_11C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:30:4.7:4.7,0,70.7:4:0:-4.771:8.22
6	29717817	333640:1	T	T[6:29720303[	0	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=333640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29717817(+)-6:29720303(-)__6_29718501_29743501D;SPAN=2486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:35:473:17.1:0,17.1,1225:0:35:17.42:62.5
6	29720303	333640:2	A	]6:29717817]A	0	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=333640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29717817(+)-6:29720303(-)__6_29718501_29743501D;SPAN=2486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:35:473:17.1:0,17.1,1225:0:35:17.42:62.5
6	29932114	333714:1	G	G[6:29933749[	99	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=333714:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29932114(+)-6:29933749(-)__6_29914501_29939501D;SPAN=1635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:7:11.4:125.4,11.4,0:0:41:-125.4:125.4
6	29933749	333714:2	A	]6:29932114]A	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=333714:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29932114(+)-6:29933749(-)__6_29914501_29939501D;SPAN=1635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:7:11.4:125.4,11.4,0:0:41:-125.4:125.4
6	31225585	334297:1	A	A[6:31226615[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=334297:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31225585(+)-6:31226615(-)__6_31213001_31238001D;SPAN=1030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
6	31226615	334297:2	T	]6:31225585]T	26	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=334297:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31225585(+)-6:31226615(-)__6_31213001_31238001D;SPAN=1030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
6	31243972	334323:1	C	C[6:31245339[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=334323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31243972(+)-6:31245339(-)__6_31237501_31262501D;SPAN=1367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:23:12.6:138.6,12.6,0:0:45:-138.6:138.6
6	31245339	334323:2	A	]6:31243972]A	99	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=334323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31243972(+)-6:31245339(-)__6_31237501_31262501D;SPAN=1367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:23:12.6:138.6,12.6,0:0:45:-138.6:138.6
6	31453847	334588:1	A	A[6:31456609[	54	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=334588:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31453847(+)-6:31456609(-)__6_31433501_31458501D;SPAN=2762;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55
6	31456609	334588:2	C	]6:31453847]C	54	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=334588:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31453847(+)-6:31456609(-)__6_31433501_31458501D;SPAN=2762;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55
6	31703416	334708:1	G	G[6:31706584[	24	PASS	EVDNC=ASSMB;INSERTION=ACATTTTC;MAPQ=60;MATEID=334708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_31703001_31728001_0C;SPAN=3168;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
6	31706584	334708:2	A	]6:31703416]A	24	PASS	EVDNC=ASSMB;INSERTION=ACATTTTC;MAPQ=60;MATEID=334708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_31703001_31728001_0C;SPAN=3168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
6	32320801	585625:1	A	A[11:40904857[	39	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=585625:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40890501_40915501_5C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
6	32594296	335097:1	A	A[6:32596831[	28	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=335097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:32594296(+)-6:32596831(-)__6_32585001_32610001D;SPAN=2535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:17:11.9:28.4,0,11.9:0:10:-28.47:28.47
6	32596831	335097:2	T	]6:32594296]T	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=335097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:32594296(+)-6:32596831(-)__6_32585001_32610001D;SPAN=2535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:17:11.9:28.4,0,11.9:0:10:-28.47:28.47
6	33062526	4064:2	C	]1:13299454]C	46	PASS	DISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=4064:1;MATENM=1;NM=11;NUMPARTS=3;REPSEQ=GG;SCTG=c_1_13279001_13304001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:13:5:-46.21:46.21
6	33615534	335682:1	C	C[6:33618067[	62	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=335682:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:33615534(+)-6:33618067(-)__6_33614001_33639001D;SPAN=2533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72
6	33618067	335682:2	C	]6:33615534]C	62	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=335682:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:33615534(+)-6:33618067(-)__6_33614001_33639001D;SPAN=2533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72
6	33970052	335774:1	A	A[6:33974921[	25	PASS	EVDNC=ASSMB;INSERTION=GCTTTTAT;MAPQ=60;MATEID=335774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_33957001_33982001_67C;SPAN=4869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46
6	33974921	335774:2	A	]6:33970052]A	25	PASS	EVDNC=ASSMB;INSERTION=GCTTTTAT;MAPQ=60;MATEID=335774:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_33957001_33982001_67C;SPAN=4869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46
6	34072502	335835:1	A	]6:34073328]A	45	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=335835:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34072502(-)-6:34073328(+)__6_34055001_34080001D;SPAN=826;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:51:45.2:45.2,0,81.5:0:18:-45.08:45.71
6	34073328	335835:2	C	C[6:34072502[	45	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=335835:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34072502(-)-6:34073328(+)__6_34055001_34080001D;SPAN=826;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:51:45.2:45.2,0,81.5:0:18:-45.08:45.71
6	34375168	336028:1	C	]6:34536382]C	42	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=C;MAPQ=5;MATEID=336028:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_34520501_34545501_48C;SPAN=161214;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:8:8:-42.91:42.91
6	34536382	336028:2	C	C[6:34375168[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=336028:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_34520501_34545501_48C;SPAN=161214;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:8:8:-42.91:42.91
6	34829944	336095:1	A	]6:34915313]A	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=336095:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34829944(-)-6:34915313(+)__6_34912501_34937501D;SPAN=85369;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57
6	34915313	336095:2	C	C[6:34829944[	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=336095:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34829944(-)-6:34915313(+)__6_34912501_34937501D;SPAN=85369;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57
6	35658747	336247:1	T	T[6:35661967[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=336247:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:35658747(+)-6:35661967(-)__6_35647501_35672501D;SPAN=3220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:10:9.6:105.6,9.6,0:0:35:-105.6:105.6
6	35661967	336247:2	G	]6:35658747]G	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=336247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:35658747(+)-6:35661967(-)__6_35647501_35672501D;SPAN=3220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:10:9.6:105.6,9.6,0:0:35:-105.6:105.6
6	35915816	255192:2	C	C]4:133589882]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=255192:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:133589882(+)-6:35915816(+)__4_133574001_133599001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
6	39096799	337395:1	A	A[6:39097098[	69	PASS	EVDNC=ASSMB;INSERTION=TTGTTGTTG;MAPQ=60;MATEID=337395:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_39077501_39102501_40C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
6	39097098	337395:2	A	]6:39096799]A	69	PASS	EVDNC=ASSMB;INSERTION=TTGTTGTTG;MAPQ=60;MATEID=337395:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_39077501_39102501_40C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
6	41219155	337856:1	T	]6:41219297]T	61	PASS	EVDNC=ASSMB;HOMSEQ=TGCGTATATACGAAATGTACATATATGTGCGTATATA;MAPQ=60;MATEID=337856:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_6_41209001_41234001_28C;SPAN=142;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:99:61.4:61.4,0,186.8:27:0:-61.3:64.89
6	41219297	337856:2	A	A[6:41219155[	61	PASS	EVDNC=ASSMB;HOMSEQ=TGCGTATATACGAAATGTACATATATGTGCGTATATA;MAPQ=60;MATEID=337856:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_6_41209001_41234001_28C;SPAN=142;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:99:61.4:61.4,0,186.8:27:0:-61.3:64.89
6	41436338	337911:1	T	T[6:41436646[	40	PASS	EVDNC=ASSMB;HOMSEQ=TATGCTTGAAATTTCT;MAPQ=60;MATEID=337911:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_41429501_41454501_18C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65
6	41436646	337911:2	T	]6:41436338]T	40	PASS	EVDNC=ASSMB;HOMSEQ=TATGCTTGAAATTTCT;MAPQ=60;MATEID=337911:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_41429501_41454501_18C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65
6	41897072	338045:1	T	T[6:41897594[	52	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAAGCTGAGGCAGGAGAAT;MAPQ=60;MATEID=338045:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_41895001_41920001_15C;SPAN=522;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:12:11:-52.81:52.81
6	41897594	338045:2	C	]6:41897072]C	52	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAAGCTGAGGCAGGAGAAT;MAPQ=60;MATEID=338045:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_41895001_41920001_15C;SPAN=522;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:12:11:-52.81:52.81
6	44044615	338787:1	T	]6:44045375]T	31	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=338787:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:44044615(-)-6:44045375(+)__6_44026501_44051501D;SPAN=760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:137:31.1:31.1,0,311.6:0:21:-30.81:44.53
6	44045375	338787:2	A	A[6:44044615[	31	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=338787:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:44044615(-)-6:44045375(+)__6_44026501_44051501D;SPAN=760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:137:31.1:31.1,0,311.6:0:21:-30.81:44.53
6	47167028	339768:1	T	T[6:47167380[	20	PASS	EVDNC=ASSMB;INSERTION=TTTA;MAPQ=60;MATEID=339768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_47162501_47187501_44C;SPAN=352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
6	47167380	339768:2	T	]6:47167028]T	20	PASS	EVDNC=ASSMB;INSERTION=TTTA;MAPQ=60;MATEID=339768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_47162501_47187501_44C;SPAN=352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
6	48963309	340391:1	C	C[6:48970897[	31	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=340391:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_48951001_48976001_80C;SPAN=7588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
6	48970897	340391:2	C	]6:48963309]C	31	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=340391:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_48951001_48976001_80C;SPAN=7588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
6	51133723	341121:1	T	[6:51227147[T	52	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TTTGATTGCACT;MAPQ=60;MATEID=341121:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_51205001_51230001_33C;SPAN=93424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:12:7:-52.81:52.81
6	51227147	341121:2	A	[6:51133723[A	52	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=TTTGATTGCACT;MAPQ=32;MATEID=341121:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_51205001_51230001_33C;SPAN=93424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:12:7:-52.81:52.81
6	51379339	289697:2	G	G[5:43063268[	23	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=AAAGAAAG;INSERTION=GAA;MAPQ=60;MATEID=289697:1;MATENM=6;NM=0;NUMPARTS=3;REPSEQ=AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG;SCTG=c_5_43046501_43071501_75C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:4.8:23.4,4.8,0:8:11:-23.48:23.48
6	51391502	341184:1	C	C[6:51391805[	32	PASS	EVDNC=ASSMB;HOMSEQ=AAAATTAAGGTGTC;MAPQ=60;MATEID=341184:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_51376501_51401501_45C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
6	51391805	341184:2	A	]6:51391502]A	32	PASS	EVDNC=ASSMB;HOMSEQ=AAAATTAAGGTGTC;MAPQ=60;MATEID=341184:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_51376501_51401501_45C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
6	51652566	341267:1	T	T[6:51652878[	30	PASS	EVDNC=ASSMB;HOMSEQ=TATCTCTCTTGTTTT;MAPQ=60;MATEID=341267:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_51646001_51671001_28C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:44:30.5:30.5,0,80:13:0:-30.55:31.78
6	51652878	341267:2	T	]6:51652566]T	30	PASS	EVDNC=ASSMB;HOMSEQ=TATCTCTCTTGTTTT;MAPQ=60;MATEID=341267:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_51646001_51671001_28C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:44:30.5:30.5,0,80:13:0:-30.55:31.78
6	52786107	341621:1	C	]6:52826679]C	39	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=341621:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786107(-)-6:52826679(+)__6_52822001_52847001D;SPAN=40572;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61
6	52786421	341602:1	A	A[6:52787846[	39	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=341602:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786421(+)-6:52787846(-)__6_52773001_52798001D;SPAN=1425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:35:39.8:39.8,0,46.4:0:15:-39.68:39.73
6	52787846	341602:2	A	]6:52786421]A	39	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=341602:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786421(+)-6:52787846(-)__6_52773001_52798001D;SPAN=1425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:35:39.8:39.8,0,46.4:0:15:-39.68:39.73
6	52787876	341603:1	A	]6:52826658]A	99	PASS	DISC_MAPQ=32;EVDNC=TSI_L;INSERTION=CAGTTGTATGTCCCTTTTACCAGTCATTGGGAATTCCCAAGTCTGTGATCTTGCCAAACGTAAATTCGCAATAATTGTGTGTTGATTACTTGTCTAGAGAACGTAACTTTAGCATAAACACCTACCTTTCCTCTGGCAATGATCATATTCTTAGATTAAGTAAAATGACATCATGACTATTATTTCCCCTCATGAC;MAPQ=46;MATEID=341603:2;MATENM=1;NM=8;NUMPARTS=3;REPSEQ=TT;SCTG=c_6_52773001_52798001_77C;SPAN=38782;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:22:11.4:125.4,11.4,0:38:4:-125.4:125.4
6	52826658	341603:2	C	C[6:52787876[	99	PASS	DISC_MAPQ=46;EVDNC=TSI_L;INSERTION=CAGTTGTATGTCCCTTTTACCAGTCATTGGGAATTCCCAAGTCTGTGATCTTGCCAAACGTAAATTCGCAATAATTGTGTGTTGATTACTTGTCTAGAGAACGTAACTTTAGCATAAACACCTACCTTTCCTCTGGCAATGATCATATTCTTAGATTAAGTAAAATGACATCATGACTATTATTTCCCCTCATGAC;MAPQ=60;MATEID=341603:1;MATENM=8;NM=1;NUMPARTS=3;REPSEQ=TT;SCTG=c_6_52773001_52798001_77C;SPAN=38782;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:22:11.4:125.4,11.4,0:38:4:-125.4:125.4
6	52826679	341621:2	A	A[6:52786107[	39	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=341621:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786107(-)-6:52826679(+)__6_52822001_52847001D;SPAN=40572;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61
6	53345529	341823:1	T	]6:53345659]T	59	PASS	EVDNC=ASSMB;INSERTION=ATTCA;MAPQ=60;MATEID=341823:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_53336501_53361501_10C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:48:59.3:59.3,0,59.3:22:0:-59.13:59.13
6	53345659	341823:2	A	A[6:53345529[	59	PASS	EVDNC=ASSMB;INSERTION=ATTCA;MAPQ=60;MATEID=341823:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_53336501_53361501_10C;SPAN=130;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:48:59.3:59.3,0,59.3:22:0:-59.13:59.13
6	54059860	342044:1	T	]6:54063911]T	41	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=342044:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_54047001_54072001_38C;SPAN=4051;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:15:0:-41.43:41.43
6	54060007	342045:1	T	T[6:54070031[	64	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=342045:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_54047001_54072001_5C;SPAN=10024;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:42:41:64.1,0,41:23:0:-64.37:64.37
6	54063911	342044:2	T	T[6:54059860[	41	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=342044:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_54047001_54072001_38C;SPAN=4051;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:15:0:-41.43:41.43
6	54070031	342045:2	G	]6:54060007]G	64	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=342045:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_54047001_54072001_5C;SPAN=10024;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:42:41:64.1,0,41:23:0:-64.37:64.37
6	54691651	342258:1	A	A[6:54691973[	92	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAATGTCCCA;MAPQ=60;MATEID=342258:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_54684001_54709001_67C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:30:8.4:92.4,8.4,0:30:0:-92.42:92.42
6	54691973	342258:2	A	]6:54691651]A	92	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAATGTCCCA;MAPQ=60;MATEID=342258:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_54684001_54709001_67C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:30:8.4:92.4,8.4,0:30:0:-92.42:92.42
6	58433243	343345:1	G	G[6:61307772[	89	PASS	EVDNC=ASSMB;HOMSEQ=TTCAGACAAAAAGTAGAAAGAAG;MAPQ=60;MATEID=343345:2;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_6_58432501_58457501_60C;SPAN=2874529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89
6	61027338	344228:1	C	[6:61137183[C	23	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=344228:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61027338(-)-6:61137183(-)__6_61127501_61152501D;SPAN=109845;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
6	61048724	344203:1	T	[6:61096462[T	46	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=344203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61048724(-)-6:61096462(-)__6_61078501_61103501D;SPAN=47738;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:16:4.2:46.2,4.2,0:0:14:-44.69:44.69
6	61096462	344203:2	T	[6:61048724[T	46	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=344203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61048724(-)-6:61096462(-)__6_61078501_61103501D;SPAN=47738;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:16:4.2:46.2,4.2,0:0:14:-44.69:44.69
6	61137183	344228:2	C	[6:61027338[C	23	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=344228:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61027338(-)-6:61137183(-)__6_61127501_61152501D;SPAN=109845;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
6	61307772	343345:2	T	]6:58433243]T	89	PASS	EVDNC=ASSMB;HOMSEQ=TTCAGACAAAAAGTAGAAAGAAG;MAPQ=60;MATEID=343345:1;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_6_58432501_58457501_60C;SPAN=2874529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89
6	61386959	344524:1	T	]6:61388471]T	14	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=344524:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61386959(-)-6:61388471(+)__6_61372501_61397501D;SPAN=1512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
6	61388471	344524:2	T	T[6:61386959[	14	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=344524:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61386959(-)-6:61388471(+)__6_61372501_61397501D;SPAN=1512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
6	61392871	344529:1	T	T[6:61396289[	38	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTGATAGAGCAGTTTTGAAACACTCTTTTTGT;MAPQ=60;MATEID=344529:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_61372501_61397501_122C;SPAN=3418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:8:-38.69:38.69
6	61396289	344529:2	T	]6:61392871]T	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGATAGAGCAGTTTTGAAACACTCTTTTTGT;MAPQ=60;MATEID=344529:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_61372501_61397501_122C;SPAN=3418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:8:-38.69:38.69
6	61411159	344683:1	C	C[6:61420481[	20	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=344683:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61411159(+)-6:61420481(-)__6_61397001_61422001D;SPAN=9322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25
6	61420481	344683:2	G	]6:61411159]G	20	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=344683:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61411159(+)-6:61420481(-)__6_61397001_61422001D;SPAN=9322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25
6	63957118	345607:1	A	A[6:63958454[	11	PASS	EVDNC=ASSMB;HOMSEQ=TGAA;MAPQ=60;MATEID=345607:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_63945001_63970001_71C;SPAN=1336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59
6	63958454	345607:2	T	]6:63957118]T	11	PASS	EVDNC=ASSMB;HOMSEQ=TGAA;MAPQ=60;MATEID=345607:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_63945001_63970001_71C;SPAN=1336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59
6	64312984	345733:1	G	]6:64313296]G	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCA;MAPQ=60;MATEID=345733:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64312501_64337501_31C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:38:25.7:25.7,0,68.6:11:2:-25.63:26.77
6	64313296	345733:2	A	A[6:64312984[	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCA;MAPQ=60;MATEID=345733:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64312501_64337501_31C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:38:25.7:25.7,0,68.6:11:2:-25.63:26.77
6	64475269	345800:1	A	A[6:64475574[	25	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAGAAAA;MAPQ=60;MATEID=345800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64459501_64484501_10C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35
6	64475574	345800:2	G	]6:64475269]G	25	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAGAAAA;MAPQ=60;MATEID=345800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64459501_64484501_10C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35
6	65550146	346163:1	T	T[6:65552129[	30	PASS	EVDNC=ASSMB;HOMSEQ=TACTATATCTTT;MAPQ=60;MATEID=346163:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_65537501_65562501_69C;SPAN=1983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
6	65552129	346163:2	T	]6:65550146]T	30	PASS	EVDNC=ASSMB;HOMSEQ=TACTATATCTTT;MAPQ=60;MATEID=346163:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_65537501_65562501_69C;SPAN=1983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
6	65564962	346167:1	A	A[6:65565273[	90	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGTGGGTGAA;MAPQ=60;MATEID=346167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_65562001_65587001_80C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:66:74:90.5,0,74:33:0:-90.45:90.45
6	65565273	346167:2	A	]6:65564962]A	90	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGTGGGTGAA;MAPQ=60;MATEID=346167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_65562001_65587001_80C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:66:74:90.5,0,74:33:0:-90.45:90.45
6	66298837	346482:1	T	T[6:66339024[	33	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=346482:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_66321501_66346501_25C;SPAN=40187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
6	66331014	346487:1	T	T[6:66333296[	26	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=346487:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:66331014(+)-6:66333296(-)__6_66321501_66346501D;SPAN=2282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
6	66333296	346487:2	G	]6:66331014]G	26	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=346487:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:66331014(+)-6:66333296(-)__6_66321501_66346501D;SPAN=2282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
6	66339024	346482:2	C	]6:66298837]C	33	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=346482:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_66321501_66346501_25C;SPAN=40187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
6	66782594	346626:1	A	[6:66782833[A	20	PASS	DISC_MAPQ=55;EVDNC=TSI_L;HOMSEQ=TATATATAATATCATATATATACACAAAT;MAPQ=60;MATEID=346626:2;MATENM=0;NM=3;NUMPARTS=3;REPSEQ=TATATATA;SCTG=c_6_66762501_66787501_2C;SPAN=239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:8:20,0,8:13:10:-20.11:20.11
6	66782833	346626:2	T	[6:66782594[T	20	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TATATATAATATCATATATATACACAAAT;MAPQ=60;MATEID=346626:1;MATENM=3;NM=0;NUMPARTS=3;REPSEQ=TATATATA;SCTG=c_6_66762501_66787501_2C;SPAN=239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:8:20,0,8:13:10:-20.11:20.11
6	68894805	347539:1	A	]6:68897984]A	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=347539:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_68894001_68919001_76C;SPAN=3179;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:30:34.4:34.4,0,41:9:6:-34.48:34.51
6	68897984	347539:2	A	A[6:68894805[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=347539:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_68894001_68919001_76C;SPAN=3179;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:30:34.4:34.4,0,41:9:6:-34.48:34.51
6	69480862	347749:1	C	C[6:69482377[	22	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=347749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:69480862(+)-6:69482377(-)__6_69482001_69507001D;SPAN=1515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
6	69482377	347749:2	T	]6:69480862]T	22	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=347749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:69480862(+)-6:69482377(-)__6_69482001_69507001D;SPAN=1515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
6	69542531	347773:2	A	A[4:70133000[	20	PASS	EVDNC=ASSMB;HOMSEQ=ATCCCA;MAPQ=60;MATEID=347773:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_105C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82
6	69542551	347771:2	G	]4:70132919]G	29	PASS	EVDNC=ASSMB;HOMSEQ=GCT;MAPQ=60;MATEID=347771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
6	70153588	423222:1	T	]7:120983381]T	29	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=423222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:70153588(-)-7:120983381(+)__7_120981001_121006001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
6	71198460	348415:1	A	]6:71198552]A	61	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=348415:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_71197001_71222001_76C;SPAN=92;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62
6	71198552	348415:2	A	A[6:71198460[	61	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=348415:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_71197001_71222001_76C;SPAN=92;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62
6	71861739	348671:1	T	T[6:71862047[	34	PASS	EVDNC=ASSMB;HOMSEQ=TTAAGGTGTGTTTT;MAPQ=60;MATEID=348671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_71858501_71883501_62C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:12:0:-35.24:35.24
6	71862047	348671:2	T	]6:71861739]T	34	PASS	EVDNC=ASSMB;HOMSEQ=TTAAGGTGTGTTTT;MAPQ=60;MATEID=348671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_71858501_71883501_62C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:12:0:-35.24:35.24
6	73446443	349111:1	G	G[6:73446755[	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAATCG;MAPQ=60;MATEID=349111:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_73426501_73451501_5C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41
6	73446755	349111:2	A	]6:73446443]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAATCG;MAPQ=60;MATEID=349111:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_73426501_73451501_5C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41
6	73882346	349295:1	T	T[6:73892724[	62	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=349295:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_73892001_73917001_127C;SPAN=10378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72
6	73892724	349295:2	T	]6:73882346]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=349295:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_73892001_73917001_127C;SPAN=10378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72
6	74122788	349391:1	G	G[6:74123744[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=349391:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_74112501_74137501_60C;SPAN=956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:6:3:-21.35:21.36
6	74123744	349391:2	G	]6:74122788]G	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=349391:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_74112501_74137501_60C;SPAN=956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:6:3:-21.35:21.36
6	74155824	349406:1	T	T[6:74156868[	66	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=349406:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:74155824(+)-6:74156868(-)__6_74137001_74162001D;SPAN=1044;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:9:6:66,6,0:0:22:-66.02:66.02
6	74156868	349406:2	G	]6:74155824]G	66	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=349406:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:74155824(+)-6:74156868(-)__6_74137001_74162001D;SPAN=1044;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:9:6:66,6,0:0:22:-66.02:66.02
6	75321511	349695:1	T	[18:68905257[T	49	PASS	DISC_MAPQ=5;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=18;MATEID=349695:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_75313001_75338001_23C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:14:3:-49.51:49.51
6	75610907	349808:1	G	]6:75610995]G	50	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=349808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75607001_75632001_52C;SPAN=88;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98
6	75610995	349808:2	A	A[6:75610907[	50	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=349808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75607001_75632001_52C;SPAN=88;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98
6	75678281	349877:1	A	]6:75770245]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=349877:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75754001_75779001_49C;SPAN=91964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41
6	75770245	349877:2	G	G[6:75678281[	59	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=349877:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75754001_75779001_49C;SPAN=91964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41
6	76727539	350204:1	C	C[6:76749271[	20	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=TGTGTGGGAGTCTAAGTCTCTTTGTAGGTC;MAPQ=46;MATEID=350204:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_76734001_76759001_21C;SPAN=21732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:2:6:-20.82:20.82
6	76749271	350204:2	T	]6:76727539]T	20	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TGTGTGGGAGTCTAAGTCTCTTTGTAGGTC;MAPQ=46;MATEID=350204:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_76734001_76759001_21C;SPAN=21732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:2:6:-20.82:20.82
6	77210403	350343:1	T	T[6:77210694[	62	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGCTACTGATTTTTGT;MAPQ=60;MATEID=350343:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_77199501_77224501_75C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:19:5.7:62.7,5.7,0:21:0:-62.72:62.72
6	77210694	350343:2	A	]6:77210403]A	62	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGCTACTGATTTTTGT;MAPQ=60;MATEID=350343:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_77199501_77224501_75C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:19:5.7:62.7,5.7,0:21:0:-62.72:62.72
6	77939704	350614:2	T	[3:110032910[T	47	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=350614:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_77934501_77959501_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:8:9:-49.48:49.48
6	78257477	350715:1	T	T[6:78326759[	46	PASS	EVDNC=ASSMB;INSERTION=GTCACCCAGTCTGGAGTGCTGT;MAPQ=60;MATEID=350715:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_78326501_78351501_1C;SPAN=69282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:16:0:-46.21:46.21
6	78326759	350715:2	G	]6:78257477]G	46	PASS	EVDNC=ASSMB;INSERTION=GTCACCCAGTCTGGAGTGCTGT;MAPQ=60;MATEID=350715:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_78326501_78351501_1C;SPAN=69282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:16:0:-46.21:46.21
6	79361711	350977:1	A	A[6:79363612[	36	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=350977:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361711(+)-6:79363612(-)__6_79355501_79380501D;SPAN=1901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:34:36.8:36.8,0,46.7:0:14:-36.66:36.75
6	79361925	350980:1	G	]6:79363969]G	46	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=350980:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361925(-)-6:79363969(+)__6_79355501_79380501D;SPAN=2044;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
6	79363612	350977:2	T	]6:79361711]T	36	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=350977:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361711(+)-6:79363612(-)__6_79355501_79380501D;SPAN=1901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:34:36.8:36.8,0,46.7:0:14:-36.66:36.75
6	79363969	350980:2	C	C[6:79361925[	46	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=350980:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361925(-)-6:79363969(+)__6_79355501_79380501D;SPAN=2044;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
6	81434730	351633:1	A	A[6:81469346[	26	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=351633:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81434730(+)-6:81469346(-)__6_81462501_81487501D;SPAN=34616;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
6	81435065	351618:1	G	]6:81469570]G	29	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=351618:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81435065(-)-6:81469570(+)__6_81413501_81438501D;SPAN=34505;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
6	81469346	351633:2	G	]6:81434730]G	26	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=351633:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81434730(+)-6:81469346(-)__6_81462501_81487501D;SPAN=34616;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
6	81469570	351618:2	A	A[6:81435065[	29	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=351618:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81435065(-)-6:81469570(+)__6_81413501_81438501D;SPAN=34505;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
6	82966367	352039:1	A	A[6:82966669[	11	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACCACTGA;MAPQ=60;MATEID=352039:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_82957001_82982001_48C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:19:11.3:11.3,0,34.4:5:0:-11.16:11.92
6	82966669	352039:2	A	]6:82966367]A	11	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACCACTGA;MAPQ=60;MATEID=352039:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_82957001_82982001_48C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:19:11.3:11.3,0,34.4:5:0:-11.16:11.92
6	84608433	352428:1	T	T[6:84614503[	89	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATGT;MAPQ=60;MATEID=352428:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_6_84598501_84623501_36C;SPAN=6070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:29:0:-89.12:89.12
6	84614503	352428:2	A	]6:84608433]A	89	PASS	EVDNC=ASSMB;HOMSEQ=AGAAATGT;MAPQ=60;MATEID=352428:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_6_84598501_84623501_36C;SPAN=6070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:22:8.1:89.1,8.1,0:29:0:-89.12:89.12
6	85316647	352651:1	C	C[6:85316950[	75	PASS	EVDNC=ASSMB;HOMSEQ=AAGGGTGGGTCCC;MAPQ=60;MATEID=352651:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_85309001_85334001_16C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92
6	85316950	352651:2	A	]6:85316647]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AAGGGTGGGTCCC;MAPQ=60;MATEID=352651:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_85309001_85334001_16C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92
6	85434593	352692:1	C	C[6:85434915[	43	PASS	EVDNC=ASSMB;HOMSEQ=GAAATTGCAGGCC;MAPQ=60;MATEID=352692:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_85431501_85456501_27C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
6	85434915	352692:2	G	]6:85434593]G	43	PASS	EVDNC=ASSMB;HOMSEQ=GAAATTGCAGGCC;MAPQ=60;MATEID=352692:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_85431501_85456501_27C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
6	85914115	352816:1	C	C[6:85916115[	23	PASS	EVDNC=ASSMB;INSERTION=CATGGGG;MAPQ=60;MATEID=352816:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_85897001_85922001_1C;SPAN=2000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
6	85916115	352816:2	G	]6:85914115]G	23	PASS	EVDNC=ASSMB;INSERTION=CATGGGG;MAPQ=60;MATEID=352816:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_85897001_85922001_1C;SPAN=2000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
6	85999056	352839:1	T	T[6:86005120[	46	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=352839:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:85999056(+)-6:86005120(-)__6_85995001_86020001D;SPAN=6064;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
6	86005120	352839:2	T	]6:85999056]T	46	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=352839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:85999056(+)-6:86005120(-)__6_85995001_86020001D;SPAN=6064;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
6	87514975	353351:1	A	A[6:87625111[	40	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=353351:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_87612001_87637001_4C;SPAN=110136;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
6	87603225	353460:1	G	]6:87844554]G	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=353460:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_87832501_87857501_128C;SPAN=241329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:7:3:-26.41:26.41
6	87625111	353351:2	T	]6:87514975]T	40	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=353351:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_87612001_87637001_4C;SPAN=110136;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
6	87844554	353460:2	C	C[6:87603225[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=353460:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_87832501_87857501_128C;SPAN=241329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:7:3:-26.41:26.41
6	92996975	354864:1	G	]6:93033903]G	46	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=354864:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:92996975(-)-6:93033903(+)__6_93026501_93051501D;SPAN=36928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
6	93033903	354864:2	T	T[6:92996975[	46	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=354864:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:92996975(-)-6:93033903(+)__6_93026501_93051501D;SPAN=36928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
6	94031356	355198:1	T	T]6:94031699]	46	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=355198:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94006501_94031501_12C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
6	94031356	355209:1	T	T[Un_KN707748v1_decoy:1[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GGAGTTCCAATACATCTGGCAGCAGACTTTTCAGTGGAAATCTTACAGGCCGAGAGAGTGGCATGACATATTTAAAGTGCTGAAGGAAAAAACAAAAAACAAAAAACAAAAAACTTTTATCCTAGAATGGTATATCTGGTGAAAATAACCTTCAAGAGTGAGGGAGAAATAAAGACTTTCCTATACAAACAAACTGAGGGATTTCATCAATACTAGACCTGTCTTACACAAATGGTCAAGGGTACTCTGCAATCTGAAGGAAAAAGTATGTTAATGAGCAACAAAAAGTCAGCTGAAGGTACAAAATTCACTGGTAATAGCACACAGAAAAACACAGAATATTATAACAA;MAPQ=60;MATEID=355209:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_6_94031001_94056001_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:12:12.9:141.9,12.9,0:47:0:-141.9:141.9
6	94031699	355198:2	C	C]6:94031356]	46	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=355198:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94006501_94031501_12C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
6	94103373	355239:2	A	[1:53954647[A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATA;MAPQ=60;MATEID=355239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94080001_94105001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:10:12:-49.51:49.51
6	94483606	355385:1	A	A[6:94484619[	95	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=355385:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_94472001_94497001_0C;SPAN=1013;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:17:8.7:95.7,8.7,0:32:0:-95.72:95.72
6	94484619	355385:2	T	]6:94483606]T	95	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=355385:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_94472001_94497001_0C;SPAN=1013;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:17:8.7:95.7,8.7,0:32:0:-95.72:95.72
6	94949156	355480:1	T	T[6:94949479[	69	PASS	EVDNC=ASSMB;HOMSEQ=AACAACAATGT;MAPQ=60;MATEID=355480:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_94937501_94962501_19C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
6	94949479	355480:2	A	]6:94949156]A	69	PASS	EVDNC=ASSMB;HOMSEQ=AACAACAATGT;MAPQ=60;MATEID=355480:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_94937501_94962501_19C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
6	95104597	355551:1	G	]6:95122065]G	28	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=355551:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95109001_95134001_93C;SPAN=17468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
6	95122065	355551:2	A	A[6:95104597[	28	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=355551:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95109001_95134001_93C;SPAN=17468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
6	95251293	355670:1	T	T[6:95252916[	52	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=355670:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:95251293(+)-6:95252916(-)__6_95231501_95256501D;SPAN=1623;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81
6	95252916	355670:2	A	]6:95251293]A	52	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=355670:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:95251293(+)-6:95252916(-)__6_95231501_95256501D;SPAN=1623;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81
6	95303196	355697:1	T	T[6:95303500[	44	PASS	EVDNC=ASSMB;HOMSEQ=TCCCAAATCTTTTT;MAPQ=60;MATEID=355697:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95280501_95305501_59C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:19:1.4:44.3,0,1.4:15:0:-46.2:46.2
6	95303500	355697:2	T	]6:95303196]T	44	PASS	EVDNC=ASSMB;HOMSEQ=TCCCAAATCTTTTT;MAPQ=60;MATEID=355697:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95280501_95305501_59C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:19:1.4:44.3,0,1.4:15:0:-46.2:46.2
6	97039514	356253:1	T	T[6:97039732[	24	PASS	EVDNC=ASSMB;INSERTION=ACAATAG;MAPQ=60;MATEID=356253:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_6_97020001_97045001_20C;SPAN=218;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
6	97039732	356253:2	A	]6:97039514]A	24	PASS	EVDNC=ASSMB;INSERTION=ACAATAG;MAPQ=60;MATEID=356253:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_6_97020001_97045001_20C;SPAN=218;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
6	99586625	356965:1	A	A[6:99587446[	46	PASS	EVDNC=ASSMB;INSERTION=ATTGC;MAPQ=60;MATEID=356965:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_99568001_99593001_107C;SPAN=821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
6	99587446	356965:2	T	]6:99586625]T	46	PASS	EVDNC=ASSMB;INSERTION=ATTGC;MAPQ=60;MATEID=356965:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_99568001_99593001_107C;SPAN=821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
6	101046817	357372:1	C	C[6:101048733[	47	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=357372:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:101046817(+)-6:101048733(-)__6_101038001_101063001D;SPAN=1916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:0:16:-49.48:49.48
6	101048733	357372:2	G	]6:101046817]G	47	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=357372:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:101046817(+)-6:101048733(-)__6_101038001_101063001D;SPAN=1916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:0:16:-49.48:49.48
6	101065929	357378:2	G	[4:63062069[G	69	PASS	DISC_MAPQ=23;EVDNC=ASDIS;INSERTION=TACAAACTCACTGGGAGGAA;MAPQ=57;MATEID=357378:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_6_101062501_101087501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:15:6.3:69.3,6.3,0:22:3:-69.32:69.32
6	102367247	357846:1	T	T[6:102367939[	41	PASS	EVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=357846:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_102361001_102386001_92C;SPAN=692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:30:34.4:41,0,34.4:15:0:-41.11:41.11
6	102367939	357846:2	C	]6:102367247]C	41	PASS	EVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=357846:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_102361001_102386001_92C;SPAN=692;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:30:34.4:41,0,34.4:15:0:-41.11:41.11
6	103289589	358187:1	T	T[6:103315015[	52	PASS	EVDNC=ASSMB;INSERTION=GCCA;MAPQ=60;MATEID=358187:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_103292001_103317001_15C;SPAN=25426;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81
6	103315015	358187:2	A	]6:103289589]A	52	PASS	EVDNC=ASSMB;INSERTION=GCCA;MAPQ=60;MATEID=358187:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_103292001_103317001_15C;SPAN=25426;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81
6	104812953	358589:1	C	C[6:104815883[	52	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=358589:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_104811001_104836001_23C;SPAN=2930;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:18:0:-52.81:52.81
6	104815883	358589:2	G	]6:104812953]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=358589:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_104811001_104836001_23C;SPAN=2930;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:18:0:-52.81:52.81
6	105050281	358669:1	G	G[6:105051158[	28	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=358669:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:105050281(+)-6:105051158(-)__6_105031501_105056501D;SPAN=877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
6	105051158	358669:2	G	]6:105050281]G	28	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=358669:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:105050281(+)-6:105051158(-)__6_105031501_105056501D;SPAN=877;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
6	105456034	358766:1	T	]6:105555892]T	16	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGA;MAPQ=60;MATEID=358766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_105448001_105473001_3C;SPAN=99858;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:11:10.1:16.7,0,10.1:3:4:-16.78:16.78
6	105555892	358766:2	A	A[6:105456034[	16	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGA;MAPQ=60;MATEID=358766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_105448001_105473001_3C;SPAN=99858;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:11:10.1:16.7,0,10.1:3:4:-16.78:16.78
6	106535761	359076:1	T	T[6:106536067[	99	PASS	EVDNC=ASSMB;HOMSEQ=AGCCACTAACTTTT;MAPQ=60;MATEID=359076:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_106526001_106551001_145C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:24:10.5:115.5,10.5,0:38:0:-115.5:115.5
6	106536067	359076:2	A	]6:106535761]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AGCCACTAACTTTT;MAPQ=60;MATEID=359076:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_106526001_106551001_145C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:24:10.5:115.5,10.5,0:38:0:-115.5:115.5
6	107710138	359522:1	T	T[6:107711199[	14	PASS	EVDNC=ASSMB;INSERTION=TCCTCCCACTCACTCC;MAPQ=60;MATEID=359522:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_107702001_107727001_125C;SPAN=1061;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:19:14.6:14.6,0,31.1:6:0:-14.47:14.88
6	107711199	359522:2	A	]6:107710138]A	14	PASS	EVDNC=ASSMB;INSERTION=TCCTCCCACTCACTCC;MAPQ=60;MATEID=359522:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_107702001_107727001_125C;SPAN=1061;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:19:14.6:14.6,0,31.1:6:0:-14.47:14.88
6	111370154	360501:1	T	T[6:111435576[	22	PASS	EVDNC=ASSMB;INSERTION=AATTGCAGCACTATTC;MAPQ=60;MATEID=360501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_111426001_111451001_23C;SPAN=65422;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
6	111435576	360501:2	A	]6:111370154]A	22	PASS	EVDNC=ASSMB;INSERTION=AATTGCAGCACTATTC;MAPQ=60;MATEID=360501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_111426001_111451001_23C;SPAN=65422;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
6	113883834	361285:1	T	]6:113930762]T	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=361285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_113925001_113950001_52C;SPAN=46928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:7:6:-26.75:27.42
6	113930762	361285:2	C	C[6:113883834[	26	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=361285:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_113925001_113950001_52C;SPAN=46928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:7:6:-26.75:27.42
6	115303388	361736:1	G	G[6:115303689[	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAATATTTTTTTTGTG;MAPQ=60;MATEID=361736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_115297001_115322001_25C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:242:28:0,28,663.4:12:0:28.41:19.29
6	115303689	361736:2	A	]6:115303388]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAATATTTTTTTTGTG;MAPQ=60;MATEID=361736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_115297001_115322001_25C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:242:28:0,28,663.4:12:0:28.41:19.29
6	116429667	362079:1	G	G[6:116429970[	59	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATATGAGGAGTTG;MAPQ=60;MATEID=362079:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_116424001_116449001_4C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:14:8:-59.41:59.41
6	116429970	362079:2	A	]6:116429667]A	59	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATATGAGGAGTTG;MAPQ=60;MATEID=362079:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_116424001_116449001_4C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:13:5.4:59.4,5.4,0:14:8:-59.41:59.41
6	117477466	362360:1	A	]6:117477573]A	43	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=362360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_117477501_117502501_43C;SPAN=107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
6	117477573	362360:2	A	A[6:117477466[	43	PASS	EVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=362360:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_117477501_117502501_43C;SPAN=107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
6	118940826	362740:1	A	]6:118941155]A	18	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=362740:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_118923001_118948001_18C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:2:-18.47:20.76
6	118941155	362740:2	G	G[6:118940826[	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=362740:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_118923001_118948001_18C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:2:-18.47:20.76
6	120504096	363278:1	A	]6:120504276]A	43	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=363278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120491001_120516001_16C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:44:43.7:43.7,0,66.8:17:0:-43.75:44.02
6	120504276	363278:2	A	A[6:120504096[	43	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=363278:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120491001_120516001_16C;SPAN=180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:44:43.7:43.7,0,66.8:17:0:-43.75:44.02
6	120942553	363442:1	T	T[6:120942778[	72	PASS	EVDNC=ASSMB;HOMSEQ=CAACAGTTT;MAPQ=60;MATEID=363442:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120932001_120957001_31C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:18:6.6:72.6,6.6,0:24:0:-72.62:72.62
6	120942778	363442:2	C	]6:120942553]C	72	PASS	EVDNC=ASSMB;HOMSEQ=CAACAGTTT;MAPQ=60;MATEID=363442:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120932001_120957001_31C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:18:6.6:72.6,6.6,0:24:0:-72.62:72.62
6	120998160	363470:1	T	T[6:120998471[	22	PASS	EVDNC=ASSMB;HOMSEQ=CCTTTCCCATTCTT;MAPQ=60;MATEID=363470:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120981001_121006001_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
6	120998471	363470:2	C	]6:120998160]C	22	PASS	EVDNC=ASSMB;HOMSEQ=CCTTTCCCATTCTT;MAPQ=60;MATEID=363470:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120981001_121006001_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
6	121472042	363657:1	A	]6:121472146]A	49	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=363657:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_6C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:36:39.5:49.4,0,39.5:18:0:-49.34:49.34
6	121472146	363657:2	C	C[6:121472042[	49	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=363657:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_6C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:36:39.5:49.4,0,39.5:18:0:-49.34:49.34
6	121486357	363669:1	C	C[6:121486645[	14	PASS	EVDNC=ASSMB;HOMSEQ=GATCTCGGCTCACTGCAGCCTC;MAPQ=60;MATEID=363669:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_57C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39
6	121486645	363669:2	G	]6:121486357]G	14	PASS	EVDNC=ASSMB;HOMSEQ=GATCTCGGCTCACTGCAGCCTC;MAPQ=60;MATEID=363669:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_121471001_121496001_57C;SPAN=288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39
6	122378179	363918:1	C	]6:122587980]C	22	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=363918:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:122378179(-)-6:122587980(+)__6_122377501_122402501D;SPAN=209801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
6	122587980	363918:2	T	T[6:122378179[	22	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=363918:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:122378179(-)-6:122587980(+)__6_122377501_122402501D;SPAN=209801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
6	122850286	737285:1	G	G[15:70547227[	99	PASS	DISC_MAPQ=29;EVDNC=ASDIS;INSERTION=C;MAPQ=0;MATEID=737285:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_70535501_70560501_58C;SPAN=-1;SUBN=9;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:22:13.8:151.8,13.8,0:38:23:-151.8:151.8
6	124177144	364451:1	A	A[6:124177531[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=364451:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_124166001_124191001_48C;SPAN=387;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
6	124177531	364451:2	T	]6:124177144]T	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=364451:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_124166001_124191001_48C;SPAN=387;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
6	125861963	364956:1	G	G[6:125866159[	56	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=364956:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:125861963(+)-6:125866159(-)__6_125856501_125881501D;SPAN=4196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11
6	125866159	364956:2	G	]6:125861963]G	56	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=364956:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:125861963(+)-6:125866159(-)__6_125856501_125881501D;SPAN=4196;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11
6	126917735	365070:1	G	G[6:126919915[	38	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=365070:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_126910001_126935001_16C;SPAN=2180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37
6	126919915	365070:2	G	]6:126917735]G	38	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=365070:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_126910001_126935001_16C;SPAN=2180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37
6	128054467	365326:1	A	]6:128144890]A	36	PASS	EVDNC=ASSMB;INSERTION=ATTTATAATTATAAATTATAAATTTATAATTTATAATTT;MAPQ=60;MATEID=365326:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_128135001_128160001_15C;SPAN=90423;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29
6	128144890	365326:2	T	T[6:128054467[	36	PASS	EVDNC=ASSMB;INSERTION=ATTTATAATTATAAATTATAAATTTATAATTTATAATTT;MAPQ=60;MATEID=365326:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_128135001_128160001_15C;SPAN=90423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29
6	130638263	366051:1	T	T[6:130638570[	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCCAAAACTTCTT;MAPQ=60;MATEID=366051:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_130634001_130659001_8C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:18:6:-72.62:72.62
6	130638570	366051:2	C	]6:130638263]C	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCCAAAACTTCTT;MAPQ=60;MATEID=366051:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_130634001_130659001_8C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:18:6:-72.62:72.62
6	133020695	366763:1	T	T[6:133026747[	65	PASS	EVDNC=ASSMB;HOMSEQ=AGGTGTGATGTTTT;MAPQ=60;MATEID=366763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133010501_133035501_54C;SPAN=6052;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93
6	133026747	366763:2	A	]6:133020695]A	65	PASS	EVDNC=ASSMB;HOMSEQ=AGGTGTGATGTTTT;MAPQ=60;MATEID=366763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133010501_133035501_54C;SPAN=6052;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93
6	133050362	366771:1	T	T[6:133050693[	10	PASS	EVDNC=ASSMB;HOMSEQ=GCCAATTTTTCTTT;MAPQ=60;MATEID=366771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133035001_133060001_2C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4
6	133050693	366771:2	G	]6:133050362]G	10	PASS	EVDNC=ASSMB;HOMSEQ=GCCAATTTTTCTTT;MAPQ=60;MATEID=366771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133035001_133060001_2C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4
6	133947842	366979:1	G	G[6:133948587[	37	PASS	EVDNC=ASSMB;HOMSEQ=AGAG;MAPQ=60;MATEID=366979:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_133941501_133966501_10C;SPAN=745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
6	133948587	366979:2	A	]6:133947842]A	37	PASS	EVDNC=ASSMB;HOMSEQ=AGAG;MAPQ=60;MATEID=366979:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_133941501_133966501_10C;SPAN=745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
6	135509695	367689:1	G	[6:136518755[G	36	PASS	DISC_MAPQ=45;EVDNC=ASDIS;INSERTION=TTGTGTGGTGCA;MAPQ=60;MATEID=367689:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_136514001_136539001_14C;SPAN=1009060;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:9:4:-36.29:36.29
6	136518755	367689:2	A	[6:135509695[A	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTGTGTGGTGCA;MAPQ=60;MATEID=367689:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_136514001_136539001_14C;SPAN=1009060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:9:4:-36.29:36.29
6	136992557	367825:1	T	T[6:136993050[	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=367825:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_136979501_137004501_57C;SPAN=493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:18:9.3:102.3,9.3,0:34:0:-102.3:102.3
6	136993050	367825:2	T	]6:136992557]T	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=367825:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_136979501_137004501_57C;SPAN=493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:18:9.3:102.3,9.3,0:34:0:-102.3:102.3
6	138626611	368262:1	A	A[6:138626919[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATTGTA;MAPQ=60;MATEID=368262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_138621001_138646001_87C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:11:5:-35.33:35.33
6	138626919	368262:2	A	]6:138626611]A	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATTGTA;MAPQ=60;MATEID=368262:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_138621001_138646001_87C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:11:5:-35.33:35.33
6	139281458	368489:1	T	T[6:139285973[	36	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=368489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:139281458(+)-6:139285973(-)__6_139282501_139307501D;SPAN=4515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31
6	139285973	368489:2	C	]6:139281458]C	36	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=368489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:139281458(+)-6:139285973(-)__6_139282501_139307501D;SPAN=4515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31
6	141227487	369042:1	C	C[6:141228894[	20	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=369042:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_141218001_141243001_41C;SPAN=1407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77
6	141228894	369042:2	T	]6:141227487]T	20	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=369042:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_141218001_141243001_41C;SPAN=1407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77
6	144317788	369819:1	A	]6:144336154]A	27	PASS	EVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=369819:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_144329501_144354501_32C;SPAN=18366;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
6	144336154	369819:2	C	C[6:144317788[	27	PASS	EVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=369819:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_144329501_144354501_32C;SPAN=18366;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
6	147050431	842826:1	C	[19:13737615[C	99	PASS	DISC_MAPQ=15;EVDNC=ASDIS;HOMSEQ=CCTGGCTAATTTTTGTATTTTTAGTAGAGA;INSERTION=AAGCCACCGTGTCCCGCCAGCATCCACCTGC;MAPQ=56;MATEID=842826:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_19_13720001_13745001_137C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:14:10.5:115.5,10.5,0:37:7:-115.5:115.5
6	148915835	370577:1	A	]6:148915968]A	39	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=370577:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_148911001_148936001_6C;SPAN=133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77
6	148915968	370577:2	A	A[6:148915835[	39	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=370577:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_148911001_148936001_6C;SPAN=133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77
6	151416863	371503:1	G	]6:152402215]G	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=371503:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_152390001_152415001_1C;SPAN=985352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:10:10:-38:38
6	151501557	371325:1	A	]6:151688188]A	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACTTCA;MAPQ=60;MATEID=371325:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151679501_151704501_5C;SPAN=186631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:33:30.5:30.5,0,50.3:8:9:-30.34:30.67
6	151549893	371281:1	G	]6:151588711]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=371281:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151581501_151606501_4C;SPAN=38818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:36:36.2:52.7,0,36.2:19:0:-52.72:52.72
6	151563417	371335:1	C	]6:151724279]C	66	PASS	EVDNC=ASSMB;HOMSEQ=CTCCC;MAPQ=60;MATEID=371335:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151704001_151729001_20C;SPAN=160862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:22:6:66,6,0:21:0:-66.02:66.02
6	151564431	371273:1	G	G[6:151716324[	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCAGG;MAPQ=60;MATEID=371273:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_151557001_151582001_15C;SPAN=151893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:6:7:-20.36:23
6	151588711	371281:2	C	C[6:151549893[	52	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=371281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151581501_151606501_4C;SPAN=38818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:36:36.2:52.7,0,36.2:19:0:-52.72:52.72
6	151688188	371325:2	A	A[6:151501557[	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACTTCA;MAPQ=60;MATEID=371325:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151679501_151704501_5C;SPAN=186631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:33:30.5:30.5,0,50.3:8:9:-30.34:30.67
6	151716324	371273:2	G	]6:151564431]G	20	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCAGG;MAPQ=60;MATEID=371273:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_151557001_151582001_15C;SPAN=151893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:6:7:-20.36:23
6	151724279	371335:2	C	C[6:151563417[	66	PASS	EVDNC=ASSMB;HOMSEQ=CTCCC;MAPQ=60;MATEID=371335:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151704001_151729001_20C;SPAN=160862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:22:6:66,6,0:21:0:-66.02:66.02
6	152402215	371503:2	G	G[6:151416863[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=371503:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_152390001_152415001_1C;SPAN=985352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:10:10:-38:38
6	153202067	371709:2	G	]3:177126512]G	69	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATC;INSERTION=T;MAPQ=60;MATEID=371709:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
6	153202080	371714:1	G	G]6:153202289]	72	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=T;MAPQ=60;MATEID=371714:2;MATENM=1;NM=8;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
6	153202289	371714:2	T	T]6:153202080]	72	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=T;MAPQ=60;MATEID=371714:1;MATENM=8;NM=1;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
6	153202309	371708:2	T	]3:177122919]T	92	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=371708:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:177122919(+)-6:153202309(-)__6_153198501_153223501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:6:8.4:92.4,8.4,0:0:31:-92.42:92.42
6	153224432	371723:1	C	]6:153230983]C	29	PASS	DISC_MAPQ=51;EVDNC=ASDIS;MAPQ=60;MATEID=371723:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_153223001_153248001_26C;SPAN=6551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:5:8:-29.57:29.57
6	153230983	371723:2	T	T[6:153224432[	29	PASS	DISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=371723:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_153223001_153248001_26C;SPAN=6551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:5:8:-29.57:29.57
6	154142158	371950:1	T	[6:154142366[T	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=371950:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:154142158(-)-6:154142366(-)__6_154129501_154154501D;SPAN=208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
6	154142366	371950:2	A	[6:154142158[A	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=371950:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:154142158(-)-6:154142366(-)__6_154129501_154154501D;SPAN=208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
6	155599677	372340:1	G	]6:155680578]G	66	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=372340:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_155673001_155698001_4C;SPAN=80901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:15:6:66,6,0:22:0:-66.02:66.02
6	155680578	372340:2	T	T[6:155599677[	66	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=372340:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_155673001_155698001_4C;SPAN=80901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:15:6:66,6,0:22:0:-66.02:66.02
6	157310372	372674:1	G	]6:157313583]G	52	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCATAGTGCCCCAGTGT;INSERTION=A;MAPQ=11;MATEID=372674:2;MATENM=2;NM=5;NUMPARTS=4;SCTG=c_6_157290001_157315001_28C;SPAN=3211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:59:52.7:52.7,0,95.6:19:2:-52.74:53.42
6	157312929	372795:1	A	]6:157313583]A	24	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATCATAGTGCCCCAGTGTTCGCTCACCTGGCCTCATCATAGTGTCCCAGATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCACAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGCCTCAGTGTGCTCTCGCCTAGCCTCATCATAGTGTCCCAGTG;INSERTION=ATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCAC;MAPQ=60;MATEID=372795:2;MATENM=1;NM=2;NUMPARTS=3;SCTG=c_6_157290001_157315001_127C;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:161:24.1:24.1,0,380.6:19:2:-24.07:42.94
6	157313583	372795:2	G	G[6:157312929[	24	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATCATAGTGCCCCAGTGTTCGCTCACCTGGCCTCATCATAGTGTCCCAGATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCACAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGCCTCAGTGTGCTCTCGCCTAGCCTCATCATAGTGTCCCAGTG;INSERTION=ATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCAC;MAPQ=60;MATEID=372795:1;MATENM=2;NM=1;NUMPARTS=3;SCTG=c_6_157290001_157315001_127C;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:161:24.1:24.1,0,380.6:19:2:-24.07:42.94
6	157313583	372674:2	G	G[6:157310372[	52	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATAGTGCCCCAGTGT;INSERTION=A;MAPQ=46;MATEID=372674:1;MATENM=5;NM=2;NUMPARTS=4;SCTG=c_6_157290001_157315001_28C;SPAN=3211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:59:52.7:52.7,0,95.6:19:2:-52.74:53.42
6	158127250	373083:1	C	C[6:158128035[	70	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATGAACATATC;MAPQ=60;MATEID=373083:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_158123001_158148001_9C;SPAN=785;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:30:4.7:70.7,0,4.7:24:0:-74.22:74.22
6	158128035	373083:2	G	]6:158127250]G	70	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATGAACATATC;MAPQ=60;MATEID=373083:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_158123001_158148001_9C;SPAN=785;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:30:4.7:70.7,0,4.7:24:0:-74.22:74.22
6	161982335	374113:1	T	T[6:161983920[	52	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=374113:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:161982335(+)-6:161983920(-)__6_161969501_161994501D;SPAN=1585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81
6	161983920	374113:2	A	]6:161982335]A	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=374113:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:161982335(+)-6:161983920(-)__6_161969501_161994501D;SPAN=1585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81
6	162219796	374192:1	A	]6:162229285]A	18	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=374192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162214501_162239501_8C;SPAN=9489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
6	162229285	374192:2	T	T[6:162219796[	18	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=374192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162214501_162239501_8C;SPAN=9489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
6	162379810	374213:1	A	A[6:162380510[	22	PASS	EVDNC=ASSMB;INSERTION=ATATGTGTGTA;MAPQ=60;MATEID=374213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162361501_162386501_24C;SPAN=700;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:8:0:-23.02:23.02
6	162380510	374213:2	T	]6:162379810]T	22	PASS	EVDNC=ASSMB;INSERTION=ATATGTGTGTA;MAPQ=60;MATEID=374213:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162361501_162386501_24C;SPAN=700;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:8:0:-23.02:23.02
6	163482678	742255:1	A	]15:86013468]A	23	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=742255:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:163482678(-)-15:86013468(+)__15_85995001_86020001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
6	167074701	375348:1	G	G[6:167076088[	39	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=375348:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167074701(+)-6:167076088(-)__6_167065501_167090501D;SPAN=1387;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:4:3.6:39.6,3.6,0:0:13:-39.61:39.61
6	167076088	375348:2	T	]6:167074701]T	39	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=375348:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167074701(+)-6:167076088(-)__6_167065501_167090501D;SPAN=1387;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:4:3.6:39.6,3.6,0:0:13:-39.61:39.61
6	167223020	375377:1	T	[6:167284198[T	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=375377:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167223020(-)-6:167284198(-)__6_167212501_167237501D;SPAN=61178;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71
6	167284198	375377:2	C	[6:167223020[C	29	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=375377:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167223020(-)-6:167284198(-)__6_167212501_167237501D;SPAN=61178;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71
6	167651416	375568:1	T	]6:167652053]T	46	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=375568:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167651416(-)-6:167652053(+)__6_167629001_167654001D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:0:14:-46.19:46.19
6	167652053	375568:2	G	G[6:167651416[	46	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=375568:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167651416(-)-6:167652053(+)__6_167629001_167654001D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:0:14:-46.19:46.19
6	168659522	375788:1	T	]6:168660106]T	20	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=375788:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:168659522(-)-6:168660106(+)__6_168658001_168683001D;SPAN=584;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
6	168660106	375788:2	G	G[6:168659522[	20	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=375788:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:168659522(-)-6:168660106(+)__6_168658001_168683001D;SPAN=584;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
6	169996908	904003:1	T	[21:38913836[T	99	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=904003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_38906001_38931001_16C;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:51:18.3:201.3,18.3,0:61:10:-201.3:201.3
6	170452835	983884:1	G	]6:170453005]G	23	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTTAGTGTGAGTGTATGTGGGAGTGAG;MAPQ=60;MATEID=983884:2;MATENM=6;NM=5;NUMPARTS=3;SCTG=c_257_171501_196501_22C;SPAN=170;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:0:2.1:23.1,2.1,0:8:0:-23.11:23.11
6	170453005	983884:2	G	G[6:170452835[	23	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTTAGTGTGAGTGTATGTGGGAGTGAG;MAPQ=60;MATEID=983884:1;MATENM=5;NM=6;NUMPARTS=3;SCTG=c_257_171501_196501_22C;SPAN=170;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:0:2.1:23.1,2.1,0:8:0:-23.11:23.11
7	237846	376498:1	G	G[7:240253[	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=ATGGTGGTGGAGGTGATGA;MAPQ=60;MATEID=376498:2;MATENM=1;NM=4;NUMPARTS=3;SCTG=c_7_220501_245501_24C;SPAN=2407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:135:99:117.2,0,222.8:36:13:-117.2:119
7	240253	376498:2	T	]7:237846]T	99	PASS	DISC_MAPQ=21;EVDNC=ASDIS;INSERTION=ATGGTGGTGGAGGTGATGA;MAPQ=54;MATEID=376498:1;MATENM=4;NM=1;NUMPARTS=3;SCTG=c_7_220501_245501_24C;SPAN=2407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:135:99:117.2,0,222.8:36:13:-117.2:119
7	357206	376618:1	G	]7:357333]G	88	PASS	EVDNC=ASSMB;MAPQ=24;MATEID=376618:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_7_343001_368001_58C;SPAN=127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:62:65.3:88.4,0,65.3:32:0:-88.34:88.34
7	357333	376618:2	G	G[7:357206[	88	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=376618:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_7_343001_368001_58C;SPAN=127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:62:65.3:88.4,0,65.3:32:0:-88.34:88.34
7	566403	376725:1	T	]7:566782]T	17	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=376725:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:566403(-)-7:566782(+)__7_563501_588501D;SPAN=379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87
7	566782	376725:2	T	T[7:566403[	17	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=376725:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:566403(-)-7:566782(+)__7_563501_588501D;SPAN=379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87
7	1517281	377054:1	G	]7:1517474]G	39	PASS	EVDNC=ASSMB;HOMSEQ=GAATC;MAPQ=60;MATEID=377054:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_1494501_1519501_29C;SPAN=193;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:15:0:-39.11:39.25
7	1517474	377054:2	C	C[7:1517281[	39	PASS	EVDNC=ASSMB;HOMSEQ=GAATC;MAPQ=60;MATEID=377054:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_1494501_1519501_29C;SPAN=193;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:37:39.2:39.2,0,52.4:15:0:-39.11:39.25
7	1876939	914635:1	C	[22:23429471[C	26	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=914635:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:1876939(-)-22:23429471(-)__22_23422001_23447001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
7	2308151	377359:1	A	]7:2414980]A	41	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=377359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_2401001_2426001_1C;SPAN=106829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:12:11:-42.12:42.12
7	2414980	377359:2	A	A[7:2308151[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=377359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_2401001_2426001_1C;SPAN=106829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:12:11:-42.12:42.12
7	4984059	378369:1	A	[7:5730535[A	17	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=378369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:4984059(-)-7:5730535(-)__7_5708501_5733501D;SPAN=746476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
7	5730535	378369:2	G	[7:4984059[G	17	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=378369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:4984059(-)-7:5730535(-)__7_5708501_5733501D;SPAN=746476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
7	5791828	378412:1	G	G[19:8473352[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCGGGAGGCTGAGGCAG;MAPQ=60;MATEID=378412:2;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_7_5782001_5807001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:10:5:-29.71:29.71
7	6923050	378752:2	G	G[3:75414274[	30	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=378752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414274(-)-7:6923050(+)__7_6909001_6934001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:0:11:-30.82:30.82
7	8152563	379134:1	C	]7:8152858]C	8	PASS	DISC_MAPQ=28;EVDNC=TSI_L;HOMSEQ=CC;MAPQ=10;MATEID=379134:2;MATENM=10;NM=2;NUMPARTS=3;REPSEQ=CACCACCACCAC;SCTG=c_7_8134001_8159001_12C;SPAN=295;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:8.5:8.5,0,18.2:7:6:-8.054:8.563
7	8152858	379134:2	C	C[7:8152563[	8	PASS	DISC_MAPQ=36;EVDNC=TSI_L;HOMSEQ=CC;MAPQ=18;MATEID=379134:1;MATENM=2;NM=10;NUMPARTS=3;REPSEQ=CACCACCACCAC;SCTG=c_7_8134001_8159001_12C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:8.5:8.5,0,18.2:7:6:-8.054:8.563
7	9051328	379360:1	A	]Un_KN707939v1_decoy:5600]A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=379360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_9040501_9065501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3
7	9595130	379530:1	T	T[7:9596347[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=379530:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:9595130(+)-7:9596347(-)__7_9579501_9604501D;SPAN=1217;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5
7	9596347	379530:2	A	]7:9595130]A	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=379530:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:9595130(+)-7:9596347(-)__7_9579501_9604501D;SPAN=1217;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5
7	14027456	380736:1	T	T[7:14027663[	17	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=380736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_14014001_14039001_10C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
7	14027663	380736:2	T	]7:14027456]T	17	PASS	EVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=380736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_14014001_14039001_10C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
7	14211423	380770:1	G	G[7:14212338[	89	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TGTGATATTTACTCTCATGTTTTGTGATTTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTG;MAPQ=60;MATEID=380770:2;MATENM=5;NM=21;NUMPARTS=2;SCTG=c_7_14210001_14235001_11C;SPAN=915;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:2:8.1:89.1,8.1,0:13:18:-89.12:89.12
7	14212338	380770:2	T	]7:14211423]T	89	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGTGATATTTACTCTCATGTTTTGTGATTTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTG;MAPQ=60;MATEID=380770:1;MATENM=21;NM=5;NUMPARTS=2;SCTG=c_7_14210001_14235001_11C;SPAN=915;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:2:8.1:89.1,8.1,0:13:18:-89.12:89.12
7	15184371	381082:1	G	]7:15184539]G	14	PASS	EVDNC=ASSMB;HOMSEQ=GGAAGGAAGGGAGG;MAPQ=60;MATEID=381082:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_7_15165501_15190501_14C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:20:14.3:14.3,0,34.1:6:0:-14.18:14.72
7	15184539	381082:2	G	G[7:15184371[	14	PASS	EVDNC=ASSMB;HOMSEQ=GGAAGGAAGGGAGG;MAPQ=60;MATEID=381082:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_7_15165501_15190501_14C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:20:14.3:14.3,0,34.1:6:0:-14.18:14.72
7	15423545	381167:1	T	]7:15423669]T	92	PASS	EVDNC=ASSMB;INSERTION=TAACACGGTA;MAPQ=60;MATEID=381167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_15410501_15435501_9C;SPAN=124;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:71:85.7:92.3,0,85.7:34:0:-92.29:92.29
7	15423669	381167:2	T	T[7:15423545[	92	PASS	EVDNC=ASSMB;INSERTION=TAACACGGTA;MAPQ=60;MATEID=381167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_15410501_15435501_9C;SPAN=124;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:71:85.7:92.3,0,85.7:34:0:-92.29:92.29
7	15965553	916271:1	T	T[22:28669897[	7	PASS	EVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=916271:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_80C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:103:7.4:7.4,0,251.6:11:0:-7.359:21.48
7	18905828	382078:1	T	]7:18936195]T	38	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=382078:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_18914001_18939001_10C;SPAN=30367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:29:34.7:38,0,34.7:14:0:-38.07:38.07
7	18936195	382078:2	A	A[7:18905828[	38	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=382078:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_18914001_18939001_10C;SPAN=30367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:29:34.7:38,0,34.7:14:0:-38.07:38.07
7	19494848	382261:1	C	C[7:19495294[	99	PASS	DISC_MAPQ=50;EVDNC=TSI_L;HOMSEQ=ACGTATTTACGTGTGTATACACCCAGACGTATTTACGTGTGTATACAC;INSERTION=ACACACGTATTTACATATACACATATGTGTACACACACGTACGTACACGTGCGCGCACACGTACGTACACACGTGCGCGCACACGTACGTACACACGTGCGCGTACACGTACGTACACACGTACA;MAPQ=19;MATEID=382261:2;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=CACA;SCTG=c_7_19477501_19502501_10C;SPAN=446;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:42:18.9:207.9,18.9,0:67:10:-208:208
7	19495294	382261:2	T	]7:19494848]T	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ACGTATTTACGTGTGTATACACCCAGACGTATTTACGTGTGTATACAC;INSERTION=ACACACGTATTTACATATACACATATGTGTACACACACGTACGTACACGTGCGCGCACACGTACGTACACACGTGCGCGCACACGTACGTACACACGTGCGCGTACACGTACGTACACACGTACA;MAPQ=60;MATEID=382261:1;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=CACA;SCTG=c_7_19477501_19502501_10C;SPAN=446;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:42:18.9:207.9,18.9,0:67:10:-208:208
7	20669897	771521:1	T	T[16:74811117[	26	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=771521:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:20669897(+)-16:74811117(-)__16_74798501_74823501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
7	23776047	383518:1	A	[7:23798524[A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAGCCTTTGATAAAATT;MAPQ=60;MATEID=383518:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_7_23789501_23814501_18C;SPAN=22477;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:13:12:132,12,0:39:4:-132:132
7	23776228	383519:1	G	G]7:23798402]	39	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=383519:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:23776228(+)-7:23798402(+)__7_23789501_23814501D;SPAN=22174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61
7	23798402	383519:2	A	A]7:23776228]	39	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=383519:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:23776228(+)-7:23798402(+)__7_23789501_23814501D;SPAN=22174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61
7	23798524	383518:2	A	[7:23776047[A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAGCCTTTGATAAAATT;MAPQ=60;MATEID=383518:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_7_23789501_23814501_18C;SPAN=22477;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:13:12:132,12,0:39:4:-132:132
7	24409092	8608:2	T	T[1:33050733[	99	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=8608:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_33050501_33075501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:32:10.2:112.2,10.2,0:37:0:-112.2:112.2
7	25047891	383809:1	C	C[13:60888202[	99	PASS	DISC_MAPQ=6;EVDNC=ASDIS;INSERTION=TCTC;MAPQ=16;MATEID=383809:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_25039001_25064001_16C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:24:9.6:105.6,9.6,0:27:12:-105.6:105.6
7	26097503	384069:1	C	C[7:26105875[	69	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=384069:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26097503(+)-7:26105875(-)__7_26092501_26117501D;SPAN=8372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:2:6.3:69.3,6.3,0:0:23:-69.32:69.32
7	26105875	384069:2	C	]7:26097503]C	69	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=384069:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26097503(+)-7:26105875(-)__7_26092501_26117501D;SPAN=8372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:2:6.3:69.3,6.3,0:0:23:-69.32:69.32
7	26183011	384149:1	T	]7:26242794]T	62	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=384149:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_26239501_26264501_38C;SPAN=59783;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
7	26201745	726817:1	C	[15:40561981[C	24	PASS	DISC_MAPQ=31;EVDNC=ASDIS;MAPQ=60;MATEID=726817:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_40547501_40572501_61C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:8:2:-24.37:24.37
7	26213338	384129:1	T	T]15:40561991]	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATATTTTTTTTTTAAAGAAATATAT;MAPQ=60;MATEID=384129:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_26190501_26215501_0C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:44:30.5:30.5,0,80:11:5:-30.55:31.78
7	26242794	384149:2	T	T[7:26183011[	62	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=384149:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_26239501_26264501_38C;SPAN=59783;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
7	26639999	570478:1	A	A[10:126892082[	30	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=570478:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26639999(+)-10:126892082(-)__10_126885501_126910501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
7	32186402	385665:1	C	C[11:103330539[	53	PASS	DISC_MAPQ=5;EVDNC=ASDIS;MAPQ=1;MATEID=385665:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_32168501_32193501_8C;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:9:11:-55.29:55.29
7	32350665	385711:1	T	T[7:32353499[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=385711:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:32350665(+)-7:32353499(-)__7_32340001_32365001D;SPAN=2834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:7:11.7:128.7,11.7,0:0:42:-128.7:128.7
7	32353499	385711:2	A	]7:32350665]A	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=385711:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:32350665(+)-7:32353499(-)__7_32340001_32365001D;SPAN=2834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:7:11.7:128.7,11.7,0:0:42:-128.7:128.7
7	33363934	386172:1	A	A[7:33364248[	6	PASS	EVDNC=ASSMB;HOMSEQ=TTCACTATATTTTTA;MAPQ=60;MATEID=386172:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_33344501_33369501_28C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:37:6.2:6.2,0,85.4:5:0:-6.105:10.31
7	33364248	386172:2	T	]7:33363934]T	6	PASS	EVDNC=ASSMB;HOMSEQ=TTCACTATATTTTTA;MAPQ=60;MATEID=386172:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_33344501_33369501_28C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:37:6.2:6.2,0,85.4:5:0:-6.105:10.31
7	33859244	386375:1	T	T[7:33859561[	99	PASS	EVDNC=ASSMB;HOMSEQ=TGAGCCTGGCTTTCT;MAPQ=60;MATEID=386375:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_33859001_33884001_6C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:26:10.5:115.5,10.5,0:38:0:-115.5:115.5
7	33859561	386375:2	T	]7:33859244]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TGAGCCTGGCTTTCT;MAPQ=60;MATEID=386375:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_33859001_33884001_6C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:26:10.5:115.5,10.5,0:38:0:-115.5:115.5
7	35234658	386698:1	C	C]7:35245306]	33	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=386698:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:35234658(+)-7:35245306(+)__7_35231001_35256001D;SPAN=10648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58
7	35245306	386698:2	C	C]7:35234658]	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=386698:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:35234658(+)-7:35245306(+)__7_35231001_35256001D;SPAN=10648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58
7	37773598	388655:1	A	]7:40983036]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=388655:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_40964001_40989001_13C;SPAN=3209438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
7	37817083	388106:1	T	T[7:39387613[	17	PASS	EVDNC=ASSMB;INSERTION=TTAATAATTAGGTCCACAAACTCCAGTTAAATGT;MAPQ=60;MATEID=388106:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_39371501_39396501_38C;SPAN=1570530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:7:0:-17.77:17.94
7	38468872	387827:1	C	C[7:38469188[	36	PASS	EVDNC=ASSMB;HOMSEQ=AGAACATACAGAC;MAPQ=60;MATEID=387827:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_38465001_38490001_97C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66
7	38469188	387827:2	A	]7:38468872]A	36	PASS	EVDNC=ASSMB;HOMSEQ=AGAACATACAGAC;MAPQ=60;MATEID=387827:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_38465001_38490001_97C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66
7	39387613	388106:2	G	]7:37817083]G	17	PASS	EVDNC=ASSMB;INSERTION=TTAATAATTAGGTCCACAAACTCCAGTTAAATGT;MAPQ=60;MATEID=388106:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_39371501_39396501_38C;SPAN=1570530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:7:0:-17.77:17.94
7	40415033	388518:1	A	A[7:40415766[	43	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TGG;INSERTION=ATTTACAGATAGATAACTAGTTTTGACAGTGTTTTGAATAAATACTTTTTTCTTACTAAAATAGAATTCTACA;MAPQ=60;MATEID=388518:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_7_40400501_40425501_29C;SPAN=733;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:33:37.1:43.7,0,37.1:16:0:-43.55:43.55
7	40415766	388518:2	G	]7:40415033]G	43	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TGG;INSERTION=ATTTACAGATAGATAACTAGTTTTGACAGTGTTTTGAATAAATACTTTTTTCTTACTAAAATAGAATTCTACA;MAPQ=60;MATEID=388518:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_7_40400501_40425501_29C;SPAN=733;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:33:37.1:43.7,0,37.1:16:0:-43.55:43.55
7	40983036	388655:2	C	C[7:37773598[	29	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=388655:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_40964001_40989001_13C;SPAN=3209438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
7	42565038	388997:1	T	T[7:42565366[	99	PASS	EVDNC=ASSMB;HOMSEQ=AATTATTATCTTCTT;MAPQ=60;MATEID=388997:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_42556501_42581501_7C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:34:9.3:102.3,9.3,0:33:0:-102.3:102.3
7	42565366	388997:2	A	]7:42565038]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AATTATTATCTTCTT;MAPQ=60;MATEID=388997:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_42556501_42581501_7C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:34:9.3:102.3,9.3,0:33:0:-102.3:102.3
7	43049975	25214:2	T	T]1:107258745]	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CACCACTGGGGCCCACCACTGT;MAPQ=60;MATEID=25214:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_107236501_107261501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:145:0.9:0,0.9,366.3:10:3:1.146:22.03
7	44468055	389598:1	C	[7:44691857[C	26	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=389598:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:44468055(-)-7:44691857(-)__7_44688001_44713001D;SPAN=223802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
7	44691857	389598:2	C	[7:44468055[C	26	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=389598:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:44468055(-)-7:44691857(-)__7_44688001_44713001D;SPAN=223802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
7	44911156	113403:2	A	]5:173783944]A	30	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AAAGAAA;MAPQ=60;MATEID=113403:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AAAGAAAGAAAG;SCTG=c_2_136293501_136318501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:0:6.2:30.3,6.2,0:24:0:-30.37:30.37
7	46865061	390418:2	G	]4:94597595]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GAAGCC;MAPQ=60;MATEID=390418:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_107C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:30:11.1:122.1,11.1,0:40:0:-122.1:122.1
7	46865077	390417:2	T	T[4:94597407[	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTTTTTTTTTT;MAPQ=60;MATEID=390417:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_64C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:36:0:89.1,0,0:10:25:-94.04:94.04
7	47069783	390754:1	A	]7:47591253]A	32	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=390754:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_47579001_47604001_84C;SPAN=521470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:37:32.6:32.6,0,59:13:0:-32.51:32.98
7	47591253	390754:2	C	C[7:47069783[	32	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=390754:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_47579001_47604001_84C;SPAN=521470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:37:32.6:32.6,0,59:13:0:-32.51:32.98
7	47669121	390809:1	T	]7:47669934]T	5	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTA;MAPQ=60;MATEID=390809:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_47652501_47677501_13C;SPAN=813;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:62:5.9:5.9,0,147.8:3:6:-5.679:13.85
7	47669934	390809:2	A	A[7:47669121[	5	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTA;MAPQ=60;MATEID=390809:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_47652501_47677501_13C;SPAN=813;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:62:5.9:5.9,0,147.8:3:6:-5.679:13.85
7	48511636	391301:1	T	]7:48815223]T	20	PASS	EVDNC=ASSMB;INSERTION=AAA;MAPQ=60;MATEID=391301:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_48804001_48829001_19C;SPAN=303587;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:10:0:-20.36:23
7	48699596	391280:1	T	]7:48748303]T	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGTCAGCTGTGTATG;MAPQ=60;MATEID=391280:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_48730501_48755501_13C;SPAN=48707;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:33:40.4:40.4,0,40.4:12:9:-40.24:40.24
7	48748303	391280:2	A	A[7:48699596[	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGTCAGCTGTGTATG;MAPQ=60;MATEID=391280:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_48730501_48755501_13C;SPAN=48707;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:33:40.4:40.4,0,40.4:12:9:-40.24:40.24
7	48815223	391301:2	C	C[7:48511636[	20	PASS	EVDNC=ASSMB;INSERTION=AAA;MAPQ=60;MATEID=391301:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_48804001_48829001_19C;SPAN=303587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:10:0:-20.36:23
7	49485855	404622:1	G	G[7:72934712[	47	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=404622:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:49485855(+)-7:72934712(-)__7_72912001_72937001D;SPAN=23448857;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:44:47:47,0,63.5:0:18:-47.05:47.19
7	49498884	391800:1	G	]7:49896199]G	66	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=391800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49882001_49907001_57C;SPAN=397315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:22:6:66,6,0:22:0:-66.02:66.02
7	49512479	391617:1	T	T[7:49512788[	92	PASS	EVDNC=ASSMB;HOMSEQ=TCTACTGTCT;MAPQ=60;MATEID=391617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49490001_49515001_71C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:29:8.4:92.4,8.4,0:31:0:-92.42:92.42
7	49512788	391617:2	T	]7:49512479]T	92	PASS	EVDNC=ASSMB;HOMSEQ=TCTACTGTCT;MAPQ=60;MATEID=391617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49490001_49515001_71C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:29:8.4:92.4,8.4,0:31:0:-92.42:92.42
7	49562762	391670:1	T	]7:49655378]T	27	PASS	DISC_MAPQ=30;EVDNC=ASDIS;MAPQ=60;MATEID=391670:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49539001_49564001_202C;SPAN=92616;SUBN=10;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:42:27.8:27.8,0,77.3:10:8:-27.81:29.13
7	49655378	391670:2	G	G[7:49562762[	27	PASS	DISC_MAPQ=28;EVDNC=ASDIS;MAPQ=9;MATEID=391670:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49539001_49564001_202C;SPAN=92616;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:42:27.8:27.8,0,77.3:10:8:-27.81:29.13
7	49896199	391800:2	G	G[7:49498884[	66	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=391800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49882001_49907001_57C;SPAN=397315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:22:6:66,6,0:22:0:-66.02:66.02
7	51526615	392293:1	G	G[7:51530993[	35	PASS	EVDNC=ASSMB;INSERTION=CTGCA;MAPQ=60;MATEID=392293:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_51523501_51548501_40C;SPAN=4378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:38:35.6:35.6,0,58.7:14:0:-35.53:35.88
7	51530993	392293:2	G	]7:51526615]G	35	PASS	EVDNC=ASSMB;INSERTION=CTGCA;MAPQ=60;MATEID=392293:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_51523501_51548501_40C;SPAN=4378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:38:35.6:35.6,0,58.7:14:0:-35.53:35.88
7	52635403	916274:1	A	]22:28669566]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=916274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:117:0.2:0.2,0,293.9:10:0:-0.1223:18.51
7	53199663	392924:1	T	T[7:53200024[	69	PASS	EVDNC=ASSMB;INSERTION=TTCTA;MAPQ=60;MATEID=392924:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_53189501_53214501_90C;SPAN=361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	53200024	392924:2	A	]7:53199663]A	69	PASS	EVDNC=ASSMB;INSERTION=TTCTA;MAPQ=60;MATEID=392924:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_53189501_53214501_90C;SPAN=361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	53906970	393216:1	G	]7:53908079]G	27	PASS	DISC_MAPQ=52;EVDNC=ASDIS;MAPQ=60;MATEID=393216:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_53900001_53925001_84C;SPAN=1109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:5:10:-27.24:28.84
7	53908079	393216:2	T	T[7:53906970[	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=45;MATEID=393216:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_53900001_53925001_84C;SPAN=1109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:44:27.2:27.2,0,83.3:5:10:-27.24:28.84
7	54601280	393430:1	C	C[7:54601847[	69	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=393430:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_54586001_54611001_8C;SPAN=567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	54601847	393430:2	G	]7:54601280]G	69	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=393430:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_54586001_54611001_8C;SPAN=567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	55219065	393626:1	A	A[7:55221369[	85	PASS	EVDNC=ASSMB;HOMSEQ=TGCAATGTGCTTTTA;MAPQ=60;MATEID=393626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_55198501_55223501_105C;SPAN=2304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
7	55221369	393626:2	T	]7:55219065]T	85	PASS	EVDNC=ASSMB;HOMSEQ=TGCAATGTGCTTTTA;MAPQ=60;MATEID=393626:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_55198501_55223501_105C;SPAN=2304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82
7	55904079	393853:1	A	A[7:55904442[	79	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=393853:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_55884501_55909501_2C;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:9:7.2:79.2,7.2,0:14:13:-79.22:79.22
7	55904442	393853:2	A	]7:55904079]A	79	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=393853:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_55884501_55909501_2C;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:9:7.2:79.2,7.2,0:14:13:-79.22:79.22
7	56150117	393964:1	A	A[7:56152553[	72	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=393964:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:56150117(+)-7:56152553(-)__7_56129501_56154501D;SPAN=2436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:3:6.6:72.6,6.6,0:0:24:-72.62:72.62
7	56152553	393964:2	A	]7:56150117]A	72	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=393964:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:56150117(+)-7:56152553(-)__7_56129501_56154501D;SPAN=2436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:3:6.6:72.6,6.6,0:0:24:-72.62:72.62
7	57216586	394359:1	A	]7:57217236]A	5	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=394359:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57216586(-)-7:57217236(+)__7_57207501_57232501D;SPAN=650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:100:5:5,0,245.9:0:10:-4.901:19.22
7	57217236	394359:2	T	T[7:57216586[	5	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=394359:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57216586(-)-7:57217236(+)__7_57207501_57232501D;SPAN=650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:100:5:5,0,245.9:0:10:-4.901:19.22
7	57297199	394436:1	G	G[7:57297511[	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAGAGATTGGG;MAPQ=60;MATEID=394436:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57281001_57306001_145C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:10:7:-40.63:40.63
7	57297511	394436:2	A	]7:57297199]A	40	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AATAGAGATTGGG;MAPQ=60;MATEID=394436:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57281001_57306001_145C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:10:7:-40.63:40.63
7	57352716	416796:1	A	]7:100788247]A	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=416796:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57352716(-)-7:100788247(+)__7_100768501_100793501D;SPAN=43435531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42
7	57407679	394499:1	T	T[7:57408178[	40	PASS	EVDNC=ASSMB;INSERTION=GACAACTAACTACAAC;MAPQ=60;MATEID=394499:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57403501_57428501_20C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:56:40.4:40.4,0,99.8:17:0:-40.38:41.8
7	57408178	394499:2	T	]7:57407679]T	40	PASS	EVDNC=ASSMB;INSERTION=GACAACTAACTACAAC;MAPQ=60;MATEID=394499:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57403501_57428501_20C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:56:40.4:40.4,0,99.8:17:0:-40.38:41.8
7	57765386	395084:1	A	]7:57766112]A	56	PASS	DISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=AAAAAGAGTGTTTCCAACGTGCTGAATCAATATAAAGGTTTA;MAPQ=60;MATEID=395084:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_57746501_57771501_136C;SPAN=726;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:57:56.6:56.6,0,86.3:14:14:-56.6:56.95
7	57766112	395084:2	A	A[7:57765386[	56	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAAAAGAGTGTTTCCAACGTGCTGAATCAATATAAAGGTTTA;MAPQ=58;MATEID=395084:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_57746501_57771501_136C;SPAN=726;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:57:56.6:56.6,0,86.3:14:14:-56.6:56.95
7	57898025	395257:1	T	T[7:57899685[	96	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGACAGAAGAATTCTGAGAAACTTCTTTGTGAT;MAPQ=60;MATEID=395257:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_75C;SPAN=1660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:46:17:96.2,0,17:19:21:-98.83:98.83
7	57899685	395257:2	A	]7:57898025]A	96	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AGACAGAAGAATTCTGAGAAACTTCTTTGTGAT;MAPQ=60;MATEID=395257:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_57893501_57918501_75C;SPAN=1660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:46:17:96.2,0,17:19:21:-98.83:98.83
7	57906103	395274:1	T	T[7:57915470[	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGTTTTTATGTGAAGATATT;MAPQ=60;MATEID=395274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_192C;SPAN=9367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:43:50.6:57.2,0,50.6:16:8:-57.25:57.25
7	57915470	395274:2	T	]7:57906103]T	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGTTTTTATGTGAAGATATT;MAPQ=60;MATEID=395274:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_192C;SPAN=9367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:43:50.6:57.2,0,50.6:16:8:-57.25:57.25
7	58048127	395755:1	A	[16:36178073[A	19	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=395755:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58048127(-)-16:36178073(-)__7_58040501_58065501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
7	58174911	396363:1	T	]7:60121773]T	23	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=396363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58174911(-)-7:60121773(+)__7_60098501_60123501D;SPAN=1946862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
7	58175578	396150:1	G	]7:58189271]G	42	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=396150:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175578(-)-7:58189271(+)__7_58187501_58212501D;SPAN=13693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	58175826	397693:1	G	G[7:61967061[	56	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=397693:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175826(+)-7:61967061(-)__7_61960501_61985501D;SPAN=3791235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:2:5.1:56.1,5.1,0:0:19:-56.11:56.11
7	58188890	396165:1	A	]7:61964170]A	92	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=396165:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58188890(-)-7:61964170(+)__7_58187501_58212501D;SPAN=3775280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:4:8.4:92.4,8.4,0:0:30:-92.42:92.42
7	58189271	396150:2	A	A[7:58175578[	42	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=396150:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175578(-)-7:58189271(+)__7_58187501_58212501D;SPAN=13693;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	58189293	396166:1	T	T[7:61967062[	42	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=396166:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58189293(+)-7:61967062(-)__7_58187501_58212501D;SPAN=3777769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	58342553	396226:1	T	]7:58796722]T	29	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=396226:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342553(-)-7:58796722(+)__7_58775501_58800501D;SPAN=454169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
7	58342809	396402:1	A	A[7:60480878[	22	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=396402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342809(+)-7:60480878(-)__7_60466001_60491001D;SPAN=2138069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25
7	58796722	396226:2	A	A[7:58342553[	29	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=396226:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342553(-)-7:58796722(+)__7_58775501_58800501D;SPAN=454169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
7	60039036	396422:1	C	C[7:60527192[	59	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=396422:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039036(+)-7:60527192(-)__7_60515001_60540001D;SPAN=488156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	60039103	396423:1	T	T[7:60535194[	24	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=396423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039103(+)-7:60535194(-)__7_60515001_60540001D;SPAN=496091;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
7	60121773	396363:2	A	A[7:58174911[	23	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=396363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58174911(-)-7:60121773(+)__7_60098501_60123501D;SPAN=1946862;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
7	60480878	396402:2	A	]7:58342809]A	22	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=396402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342809(+)-7:60480878(-)__7_60466001_60491001D;SPAN=2138069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25
7	60527192	396422:2	A	]7:60039036]A	59	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=396422:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039036(+)-7:60527192(-)__7_60515001_60540001D;SPAN=488156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	60527476	396432:1	C	C[7:60535187[	89	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=396432:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60527476(+)-7:60535187(-)__7_60515001_60540001D;SPAN=7711;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:46:23.6:89.6,0,23.6:0:31:-91.3:91.3
7	60535187	396432:2	C	]7:60527476]C	89	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=396432:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60527476(+)-7:60535187(-)__7_60515001_60540001D;SPAN=7711;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:46:23.6:89.6,0,23.6:0:31:-91.3:91.3
7	60535194	396423:2	G	]7:60039103]G	24	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=396423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039103(+)-7:60535194(-)__7_60515001_60540001D;SPAN=496091;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
7	60922568	396589:1	T	T]7:61053929]	29	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=396589:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60922568(+)-7:61053929(+)__7_60907001_60932001D;SPAN=131361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1
7	60996030	396795:1	T	]7:60996925]T	9	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=396795:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60996030(-)-7:60996925(+)__7_60980501_61005501D;SPAN=895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:61:9.5:9.5,0,141.5:0:8:-9.261:16.38
7	60996925	396795:2	G	G[7:60996030[	9	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=396795:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60996030(-)-7:60996925(+)__7_60980501_61005501D;SPAN=895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:61:9.5:9.5,0,141.5:0:8:-9.261:16.38
7	61053929	396589:2	T	T]7:60922568]	29	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=396589:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60922568(+)-7:61053929(+)__7_60907001_60932001D;SPAN=131361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1
7	61065398	762605:1	T	T]16:34714098]	82	PASS	DISC_MAPQ=8;EVDNC=ASDIS;INSERTION=CAAATAGACT;MAPQ=34;MATEID=762605:2;MATENM=20;NM=7;NUMPARTS=2;SCTG=c_16_34692001_34717001_199C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:35:3.5:82.7,0,3.5:21:10:-86.59:86.59
7	61444229	397521:1	A	A[7:61512571[	21	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=397521:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:61444229(+)-7:61512571(-)__7_61495001_61520001D;SPAN=68342;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34
7	61512571	397521:2	G	]7:61444229]G	21	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=397521:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:61444229(+)-7:61512571(-)__7_61495001_61520001D;SPAN=68342;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34
7	61964170	396165:2	N	N[7:58188890[	92	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=396165:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58188890(-)-7:61964170(+)__7_58187501_58212501D;SPAN=3775280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:4:8.4:92.4,8.4,0:0:30:-92.42:92.42
7	61967061	397693:2	N	]7:58175826]N	56	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=397693:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175826(+)-7:61967061(-)__7_61960501_61985501D;SPAN=3791235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:2:5.1:56.1,5.1,0:0:19:-56.11:56.11
7	61967062	396166:2	N	]7:58189293]N	42	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=396166:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58189293(+)-7:61967062(-)__7_58187501_58212501D;SPAN=3777769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	62334070	398109:2	T	T[3:89460367[	44	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=398109:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_62328001_62353001_253C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:5:14:-45.49:45.49
7	62541998	398596:1	A	A[7:62544473[	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=398596:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:62541998(+)-7:62544473(-)__7_62524001_62549001D;SPAN=2475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:62:9:17.1:188.1,17.1,0:0:62:-188.1:188.1
7	62544473	398596:2	C	]7:62541998]C	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=398596:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:62541998(+)-7:62544473(-)__7_62524001_62549001D;SPAN=2475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:62:9:17.1:188.1,17.1,0:0:62:-188.1:188.1
7	63016535	785911:1	G	G[17:21814103[	59	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=785911:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:63016535(+)-17:21814103(-)__17_21805001_21830001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	63836181	401745:1	A	A[7:67962940[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GAGCTCAGCTGAACATCTTGATATTTTTTCCATATTGCATCAGCTAGAATTGCCTAAGTAGAGT;MAPQ=60;MATEID=401745:2;MATENM=13;NM=1;NUMPARTS=3;REPSEQ=AA;SCTG=c_7_67963001_67988001_2C;SPAN=4126759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:84:13:23.4:257.4,23.4,0:82:18:-257.5:257.5
7	64372757	399579:1	C	C[7:64373063[	35	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=399579:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64361501_64386501_50C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:64:35:35,0,124.1:16:0:-34.83:37.74
7	64373063	399579:2	G	]7:64372757]G	35	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=399579:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64361501_64386501_50C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:64:35:35,0,124.1:16:0:-34.83:37.74
7	64821074	399907:1	T	]7:66532417]T	31	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=399907:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_7_64802501_64827501_30C;SECONDARY;SPAN=1711343;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:6:9:-30.9:31.08
7	64855446	399956:1	C	C[7:64857681[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTTATTTTATC;MAPQ=60;MATEID=399956:2;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_7_64851501_64876501_7C;SPAN=2235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:82:48:22.8:250.8,22.8,0:82:0:-250.9:250.9
7	64857681	399956:2	A	]7:64855446]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTTATTTTATC;MAPQ=60;MATEID=399956:1;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_7_64851501_64876501_7C;SPAN=2235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:82:48:22.8:250.8,22.8,0:82:0:-250.9:250.9
7	64952998	400010:1	T	T[7:64953657[	18	PASS	EVDNC=ASSMB;INSERTION=CTGTATC;MAPQ=60;MATEID=400010:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64949501_64974501_72C;SPAN=659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:100:18.2:18.2,0,232.7:14:0:-18.1:29.09
7	64953657	400010:2	T	]7:64952998]T	18	PASS	EVDNC=ASSMB;INSERTION=CTGTATC;MAPQ=60;MATEID=400010:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64949501_64974501_72C;SPAN=659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:100:18.2:18.2,0,232.7:14:0:-18.1:29.09
7	65084152	400626:1	A	A[7:65773613[	40	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=400626:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65084152(+)-7:65773613(-)__7_65758001_65783001D;SPAN=689461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:103:40.4:40.4,0,218.6:0:21:-40.37:47.41
7	65340142	475916:1	A	]8:127521605]A	99	PASS	DISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=475916:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127498001_127523001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:56:37.1:103.1,0,37.1:34:6:-104.7:104.7
7	65398431	400347:1	A	A]7:101463616]	58	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=400347:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65398431(+)-7:101463616(+)__7_65390501_65415501D;SPAN=36065185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:0:20:-60.44:60.44
7	65418384	400358:1	A	A]12:42898470]	52	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=400358:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418384(+)-12:42898470(+)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:6:4.8:52.8,4.8,0:0:18:-52.81:52.81
7	65418509	400359:1	G	[12:42898157[G	75	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=400359:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418509(-)-12:42898157(-)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92
7	65499251	541640:1	G	G]10:38950967]	27	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=541640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65499251(+)-10:38950967(+)__10_38930501_38955501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:33:27.2:27.2,0,53.6:0:11:-27.04:27.59
7	65610610	405317:1	A	[7:74063673[A	67	PASS	DISC_MAPQ=36;EVDNC=ASDIS;INSERTION=GGGTTGTTACAAACAAAAACTCCAATTTACAAACAAAACAAAAAACACCAGGAGGTT;MAPQ=60;MATEID=405317:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74063501_74088501_20C;SPAN=8453063;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:41:34.7:67.7,0,34.7:18:15:-68.24:68.24
7	65761388	400629:1	G	]7:65764818]G	38	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=400629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_65758001_65783001_12C;SPAN=3430;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:65:38:38,0,123.8:10:10:-37.85:40.49
7	65764818	400629:2	A	A[7:65761388[	38	PASS	DISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=22;MATEID=400629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_65758001_65783001_12C;SPAN=3430;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:65:38:38,0,123.8:10:10:-37.85:40.49
7	65773613	400626:2	T	]7:65084152]T	40	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=400626:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65084152(+)-7:65773613(-)__7_65758001_65783001D;SPAN=689461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:103:40.4:40.4,0,218.6:0:21:-40.37:47.41
7	66112826	400824:2	A	A[1:225835379[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=400824:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:225835379(-)-7:66112826(+)__7_66101001_66126001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:36:23:23,0,65.9:0:10:-22.89:24.13
7	66532417	399907:2	G	G[7:64821074[	31	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=399907:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_7_64802501_64827501_30C;SECONDARY;SPAN=1711343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:6:9:-30.9:31.08
7	67020338	401208:1	A	A[Un_KN707615v1_decoy:1[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=401208:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_67007501_67032501_17C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:45:65:31.4:130.4,0,31.4:45:0:-133.5:133.5
7	67021538	401212:1	T	T]7:72805222]	15	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=401212:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67021538(+)-7:72805222(+)__7_67007501_67032501D;SPAN=5783684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:64:15.2:15.2,0,143.9:0:10:-15.02:21.3
7	67048108	401222:1	G	G]7:72779501]	25	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=401222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67048108(+)-7:72779501(+)__7_67032001_67057001D;SPAN=5731393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
7	67962940	401745:2	T	]7:63836181]T	99	PASS	DISC_MAPQ=57;EVDNC=TSI_L;INSERTION=GAGCTCAGCTGAACATCTTGATATTTTTTCCATATTGCATCAGCTAGAATTGCCTAAGTAGAGT;MAPQ=60;MATEID=401745:1;MATENM=1;NM=13;NUMPARTS=3;REPSEQ=AA;SCTG=c_7_67963001_67988001_2C;SPAN=4126759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:84:13:23.4:257.4,23.4,0:82:18:-257.5:257.5
7	68949183	402429:1	C	]7:68949334]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAA;MAPQ=60;MATEID=402429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_68943001_68968001_29C;SPAN=151;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:48:90:93.5:133.1,0,93.5:48:0:-133.5:133.5
7	68949334	402429:2	A	A[7:68949183[	99	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAA;MAPQ=60;MATEID=402429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_68943001_68968001_29C;SPAN=151;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:48:90:93.5:133.1,0,93.5:48:0:-133.5:133.5
7	69663221	402862:1	T	T[7:69731113[	99	PASS	EVDNC=ASSMB;INSERTION=GAGCTCTGTTACATTAATGAGG;MAPQ=60;MATEID=402862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_69727001_69752001_13C;SPAN=67892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6
7	69731113	402862:2	G	]7:69663221]G	99	PASS	EVDNC=ASSMB;INSERTION=GAGCTCTGTTACATTAATGAGG;MAPQ=60;MATEID=402862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_69727001_69752001_13C;SPAN=67892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6
7	70126134	403057:1	T	T[7:70138905[	30	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=403057:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70119001_70144001_40C;SPAN=12771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15
7	70138905	403057:2	T	]7:70126134]T	30	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=403057:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70119001_70144001_40C;SPAN=12771;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15
7	70139641	403167:1	A	A[7:70426389[	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_60C;SPAN=286748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:9:0:-19.31:21.11
7	70145470	403153:1	G	G[7:70382794[	37	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=403153:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70364001_70389001_0C;SPAN=237324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51
7	70175631	403093:1	C	C[7:70235698[	32	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=403093:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70175631(+)-7:70235698(-)__7_70217001_70242001D;SPAN=60067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
7	70235698	403093:2	C	]7:70175631]C	32	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=403093:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70175631(+)-7:70235698(-)__7_70217001_70242001D;SPAN=60067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
7	70268522	403109:1	A	A[7:70306354[	31	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=403109:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70268522(+)-7:70306354(-)__7_70266001_70291001D;SPAN=37832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06
7	70306354	403109:2	G	]7:70268522]G	31	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=403109:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70268522(+)-7:70306354(-)__7_70266001_70291001D;SPAN=37832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06
7	70382794	403153:2	T	]7:70145470]T	37	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=403153:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70364001_70389001_0C;SPAN=237324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51
7	70420834	403170:1	T	T[7:70424245[	21	PASS	EVDNC=ASSMB;HOMSEQ=CTGTCTT;MAPQ=60;MATEID=403170:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_21C;SPAN=3411;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:52:21.8:21.8,0,107.6:11:0:-21.69:25.03
7	70424245	403170:2	C	]7:70420834]C	21	PASS	EVDNC=ASSMB;HOMSEQ=CTGTCTT;MAPQ=60;MATEID=403170:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_21C;SPAN=3411;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:52:21.8:21.8,0,107.6:11:0:-21.69:25.03
7	70426389	403167:2	A	]7:70139641]A	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_60C;SPAN=286748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:9:0:-19.31:21.11
7	70534124	403303:1	A	A[7:70788701[	99	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403303:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70780501_70805501_85C;SPAN=254577;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:24:10.2:112.2,10.2,0:37:0:-112.2:112.2
7	70788701	403303:2	A	]7:70534124]A	99	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403303:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70780501_70805501_85C;SPAN=254577;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:24:10.2:112.2,10.2,0:37:0:-112.2:112.2
7	70956104	403416:1	A	A]7:70973945]	88	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=403416:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70956104(+)-7:70973945(+)__7_70952001_70977001D;SPAN=17841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:39:8.9:88.1,0,8.9:0:30:-91.66:91.66
7	70961199	403420:1	A	[7:70973894[A	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=403420:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_70952001_70977001_2C;SPAN=12695;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:69:55:19.2:211.2,19.2,0:46:37:-211.3:211.3
7	70973894	403420:2	T	[7:70961199[T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=403420:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_70952001_70977001_2C;SPAN=12695;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:69:55:19.2:211.2,19.2,0:46:37:-211.3:211.3
7	70973945	403416:2	G	G]7:70956104]	88	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=403416:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70956104(+)-7:70973945(+)__7_70952001_70977001D;SPAN=17841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:39:8.9:88.1,0,8.9:0:30:-91.66:91.66
7	71747047	403893:1	A	A[7:71747968[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=403893:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:71747047(+)-7:71747968(-)__7_71736001_71761001D;SPAN=921;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:6:13.2:145.2,13.2,0:0:48:-145.2:145.2
7	71747968	403893:2	G	]7:71747047]G	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=403893:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:71747047(+)-7:71747968(-)__7_71736001_71761001D;SPAN=921;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:6:13.2:145.2,13.2,0:0:48:-145.2:145.2
7	71849933	13069:2	C	]1:53954830]C	3	PASS	EVDNC=ASSMB;INSERTION=ACAGTACTACAATGAACACTCTTA;MAPQ=60;MATEID=13069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:93:3.8:3.8,0,228.2:9:0:-3.568:17.17
7	72499762	404355:1	A	A[9:69278069[	13	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=404355:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:72499762(+)-9:69278069(-)__7_72495501_72520501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:46:13.7:13.7,0,99.5:0:8:-13.48:17.45
7	72779501	401222:2	G	G]7:67048108]	25	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=401222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67048108(+)-7:72779501(+)__7_67032001_67057001D;SPAN=5731393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
7	72805222	401212:2	C	C]7:67021538]	15	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=401212:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67021538(+)-7:72805222(+)__7_67007501_67032501D;SPAN=5783684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:64:15.2:15.2,0,143.9:0:10:-15.02:21.3
7	72934712	404622:2	G	]7:49485855]G	47	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=404622:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:49485855(+)-7:72934712(-)__7_72912001_72937001D;SPAN=23448857;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:44:47:47,0,63.5:0:18:-47.05:47.19
7	72949883	405269:1	T	]7:73964039]T	9	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=405269:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73941001_73966001_52C;SPAN=1014156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:62:9.2:9.2,0,144.5:8:0:-8.98:16.32
7	73508991	404986:1	C	C[7:73509284[	1	PASS	EVDNC=ASSMB;HOMSEQ=TGCACTCCAGCCTGGGC;MAPQ=60;MATEID=404986:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_73500001_73525001_19C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:101:1.4:1.4,0,252.2:9:0:-1.319:16.83
7	73509284	404986:2	T	]7:73508991]T	1	PASS	EVDNC=ASSMB;HOMSEQ=TGCACTCCAGCCTGGGC;MAPQ=60;MATEID=404986:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_73500001_73525001_19C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:101:1.4:1.4,0,252.2:9:0:-1.319:16.83
7	73775876	405107:1	A	A[7:73776219[	0	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATTGA;MAPQ=60;MATEID=405107:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73769501_73794501_43C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:376:75.8:0,75.8,1099:9:0:75.98:11.6
7	73776219	405107:2	A	]7:73775876]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATTGA;MAPQ=60;MATEID=405107:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73769501_73794501_43C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:376:75.8:0,75.8,1099:9:0:75.98:11.6
7	73931246	405264:1	C	C[7:73931529[	0	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=405264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73916501_73941501_30C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:121:20.4:0,20.4,343.2:4:0:20.81:5.717
7	73931529	405264:2	C	]7:73931246]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=405264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73916501_73941501_30C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:121:20.4:0,20.4,343.2:4:0:20.81:5.717
7	73964039	405269:2	T	T[7:72949883[	9	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=405269:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73941001_73966001_52C;SPAN=1014156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:62:9.2:9.2,0,144.5:8:0:-8.98:16.32
7	74063673	405317:2	T	[7:65610610[T	67	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=GGGTTGTTACAAACAAAAACTCCAATTTACAAACAAAACAAAAAACACCAGGAGGTT;MAPQ=60;MATEID=405317:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74063501_74088501_20C;SPAN=8453063;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:41:34.7:67.7,0,34.7:18:15:-68.24:68.24
7	74135538	405369:1	C	C[7:74136636[	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=405369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:74135538(+)-7:74136636(-)__7_74112501_74137501D;SPAN=1098;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:56:18:15.6:171.6,15.6,0:0:56:-171.6:171.6
7	74136636	405369:2	T	]7:74135538]T	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=405369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:74135538(+)-7:74136636(-)__7_74112501_74137501D;SPAN=1098;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:56:18:15.6:171.6,15.6,0:0:56:-171.6:171.6
7	74414165	405574:1	G	G[7:74416932[	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG;MAPQ=60;MATEID=405574:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_74406501_74431501_111C;SPAN=2767;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:95:51:26.4:290.4,26.4,0:38:75:-290.5:290.5
7	74416932	405574:2	A	]7:74414165]A	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG;MAPQ=60;MATEID=405574:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_74406501_74431501_111C;SPAN=2767;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:95:51:26.4:290.4,26.4,0:38:75:-290.5:290.5
7	74689123	405771:1	G	[9:97902289[G	55	PASS	DISC_MAPQ=50;EVDNC=ASDIS;INSERTION=GCTGTAAAAATAATAAAAATAATAAACGGAGCTGCCTGGAGGCGGCCGCACTCG;MAPQ=60;MATEID=405771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_30C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:50:55.4:55.4,0,68.6:19:2:-55.27:55.37
7	74689227	405772:1	G	G[7:74690972[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=405772:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_24C;SPAN=1745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:95:0:0,0,237.6:7:2:0.2957:14.75
7	74690972	405772:2	G	]7:74689227]G	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=405772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_24C;SPAN=1745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:95:0:0,0,237.6:7:2:0.2957:14.75
7	74691113	405776:1	T	T[7:74698961[	2	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=405776:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_21C;SPAN=7848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:122:2.3:2.3,0,302.6:11:0:-2.018:20.63
7	74698961	405776:2	G	]7:74691113]G	2	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=405776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_21C;SPAN=7848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:122:2.3:2.3,0,302.6:11:0:-2.018:20.63
7	74699096	405780:1	G	G[7:74700246[	0	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=405780:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_28C;SPAN=1150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:143:20.2:0,20.2,399.3:6:0:20.39:9.202
7	74700246	405780:2	G	]7:74699096]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=405780:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_28C;SPAN=1150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:143:20.2:0,20.2,399.3:6:0:20.39:9.202
7	75759979	406698:1	T	T]7:101055231]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=406698:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:75759979(+)-7:101055231(+)__7_75754001_75779001D;SPAN=25295252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:0:9:-21.84:22.4
7	76182048	406928:1	C	[7:76200223[C	51	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=AAATATAAACATTTGTCACAAGAGGTCTACTTCCTTTTGGATATTTTCACA;MAPQ=60;MATEID=406928:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_76195001_76220001_68C;SPAN=18175;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:51:51.8:51.8,0,74.9:18:6:-51.68:51.95
7	76200223	406928:2	T	[7:76182048[T	51	PASS	DISC_MAPQ=42;EVDNC=ASDIS;INSERTION=AAATATAAACATTTGTCACAAGAGGTCTACTTCCTTTTGGATATTTTCACA;MAPQ=60;MATEID=406928:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_76195001_76220001_68C;SPAN=18175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:51:51.8:51.8,0,74.9:18:6:-51.68:51.95
7	76455113	407277:1	C	C]7:76621893]	36	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=407277:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76455113(+)-7:76621893(+)__7_76611501_76636501D;SPAN=166780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
7	76491075	407182:1	C	]7:76989236]C	17	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=407182:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76491075(-)-7:76989236(+)__7_76489001_76514001D;SPAN=498161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
7	76621893	407277:2	T	T]7:76455113]	36	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=407277:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76455113(+)-7:76621893(+)__7_76611501_76636501D;SPAN=166780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
7	76846695	407388:2	A	A[1:83390671[	16	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=407388:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390671(-)-7:76846695(+)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51
7	76847406	407389:2	C	]1:83390908]C	47	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=407389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390908(+)-7:76847406(-)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:0:17:-47.25:47.25
7	76882570	407403:2	C	C[1:83426016[	25	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=407403:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83426016(-)-7:76882570(+)__7_76881001_76906001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
7	76989236	407182:2	T	T[7:76491075[	17	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=407182:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76491075(-)-7:76989236(+)__7_76489001_76514001D;SPAN=498161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75
7	77167731	407669:1	A	[7:102703463[A	9	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=407669:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:77167731(-)-7:102703463(-)__7_77150501_77175501D;SPAN=25535732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5
7	77647707	407937:1	A	A[7:77648087[	0	PASS	EVDNC=ASSMB;HOMSEQ=GTGGCTCAGGCCTGTAATCCCAGCATTTTGGGA;MAPQ=60;MATEID=407937:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_77640501_77665501_7C;SPAN=380;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:116:12.6:0,12.6,316.8:6:0:12.8:9.755
7	77648087	407937:2	G	]7:77647707]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GTGGCTCAGGCCTGTAATCCCAGCATTTTGGGA;MAPQ=60;MATEID=407937:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_77640501_77665501_7C;SPAN=380;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:116:12.6:0,12.6,316.8:6:0:12.8:9.755
7	77743978	407983:1	G	G[7:77744269[	0	PASS	EVDNC=ASSMB;HOMSEQ=CAAGTGATCCTCCTGCCTTG;MAPQ=60;MATEID=407983:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_3C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:101:15:0,15,283.8:4:0:15.19:6.033
7	77744269	407983:2	C	]7:77743978]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CAAGTGATCCTCCTGCCTTG;MAPQ=60;MATEID=407983:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_3C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:101:15:0,15,283.8:4:0:15.19:6.033
7	77744324	407984:1	C	C[7:77744670[	0	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCAC;MAPQ=60;MATEID=407984:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_77738501_77763501_34C;SPAN=346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:92:9:0,9,247.5:5:0:9.356:8.239
7	77744670	407984:2	G	]7:77744324]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCAC;MAPQ=60;MATEID=407984:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_34C;SPAN=346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:92:9:0,9,247.5:5:0:9.356:8.239
7	78728545	408490:1	T	T[7:78728865[	23	PASS	EVDNC=ASSMB;HOMSEQ=CCATCTTTCTCTGATCTTTTT;MAPQ=60;MATEID=408490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_78718501_78743501_70C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:11:0:-23.94:25.95
7	78728865	408490:2	C	]7:78728545]C	23	PASS	EVDNC=ASSMB;HOMSEQ=CCATCTTTCTCTGATCTTTTT;MAPQ=60;MATEID=408490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_78718501_78743501_70C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:11:0:-23.94:25.95
7	79125345	412757:1	G	G[7:89181391[	47	PASS	EVDNC=ASSMB;INSERTION=CCCACCAGTTGTTTCAGTGCTGTAG;MAPQ=60;MATEID=412757:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_89180001_89205001_22C;SPAN=10056046;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6
7	79131175	408662:1	C	]20:54159808]C	34	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=408662:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79110501_79135501_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03
7	79780343	408962:1	T	T[7:79780659[	0	PASS	EVDNC=ASSMB;INSERTION=TTGG;MAPQ=60;MATEID=408962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79772001_79797001_32C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:60:0.3:0,0.3,151.8:5:0:0.3605:9.196
7	79780659	408962:2	G	]7:79780343]G	0	PASS	EVDNC=ASSMB;INSERTION=TTGG;MAPQ=60;MATEID=408962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79772001_79797001_32C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:60:0.3:0,0.3,151.8:5:0:0.3605:9.196
7	80423705	409225:1	C	[7:80603806[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAAATTGAATTGTAATT;MAPQ=60;MATEID=409225:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80409001_80434001_4C;SPAN=180101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:41:12.6:138.6,12.6,0:29:33:-138.6:138.6
7	80603145	412890:1	A	A[7:89377687[	31	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=412890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_89376001_89401001_13C;SPAN=8774542;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:12:0:-31.74:31.78
7	80603806	409225:2	A	[7:80423705[A	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=ACAAATTGAATTGTAATT;MAPQ=60;MATEID=409225:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80409001_80434001_4C;SPAN=180101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:41:12.6:138.6,12.6,0:29:33:-138.6:138.6
7	80607496	409352:1	G	]7:80633495]G	3	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=409352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80629501_80654501_61C;SPAN=25999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:69:3.8:3.8,0,168.8:7:0:-3.712:13.5
7	80633495	409352:2	A	A[7:80607496[	3	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=409352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80629501_80654501_61C;SPAN=25999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:69:3.8:3.8,0,168.8:7:0:-3.712:13.5
7	80708581	409412:1	A	A[7:80710038[	0	PASS	EVDNC=ASSMB;INSERTION=CACATATCTAT;MAPQ=60;MATEID=409412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80703001_80728001_87C;SPAN=1457;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:107:13.2:0,13.2,293.7:5:0:13.57:7.905
7	80710038	409412:2	A	]7:80708581]A	0	PASS	EVDNC=ASSMB;INSERTION=CACATATCTAT;MAPQ=60;MATEID=409412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80703001_80728001_87C;SPAN=1457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:107:13.2:0,13.2,293.7:5:0:13.57:7.905
7	80914418	409531:2	T	[5:43086248[T	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=409531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:43086248(-)-7:80914418(-)__7_80899001_80924001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:63:15.5:15.5,0,140.9:0:10:-15.3:21.37
7	81172281	409712:2	T	T]5:59692516]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=409712:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692516(+)-7:81172281(+)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:40:25.1:25.1,0,74.6:0:11:-25.07:26.48
7	81172383	409717:1	G	G[7:81172710[	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCAGTTTCTT;MAPQ=60;MATEID=409717:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_81168501_81193501_5C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:31:18.3:201.3,18.3,0:48:21:-201.3:201.3
7	81172709	409711:2	A	[5:59692316[A	59	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=409711:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692316(-)-7:81172709(-)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:12:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	81172710	409717:2	A	]7:81172383]A	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCAGTTTCTT;MAPQ=60;MATEID=409717:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_81168501_81193501_5C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:31:18.3:201.3,18.3,0:48:21:-201.3:201.3
7	81812267	409937:1	T	T[7:81813154[	92	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=409937:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:81812267(+)-7:81813154(-)__7_81805501_81830501D;SPAN=887;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:31:8.4:92.4,8.4,0:0:28:-90.61:90.61
7	81813154	409937:2	A	]7:81812267]A	92	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=409937:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:81812267(+)-7:81813154(-)__7_81805501_81830501D;SPAN=887;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:31:8.4:92.4,8.4,0:0:28:-90.61:90.61
7	82099424	410047:1	T	T[7:82099749[	99	PASS	EVDNC=ASSMB;HOMSEQ=GCAATACCTTCTT;MAPQ=60;MATEID=410047:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_82099501_82124501_74C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3
7	82099749	410047:2	G	]7:82099424]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GCAATACCTTCTT;MAPQ=60;MATEID=410047:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_82099501_82124501_74C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3
7	82809484	410398:1	T	T[7:83071482[	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=410398:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:82809484(+)-7:83071482(-)__7_82785501_82810501D;SPAN=261998;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
7	83071482	410398:2	C	]7:82809484]C	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=410398:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:82809484(+)-7:83071482(-)__7_82785501_82810501D;SPAN=261998;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
7	84080562	410862:1	T	T[7:84080872[	99	PASS	EVDNC=ASSMB;HOMSEQ=GCAGCTTATAATTCTTT;MAPQ=60;MATEID=410862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_84059501_84084501_52C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:31:12.6:138.6,12.6,0:46:0:-138.6:138.6
7	84080872	410862:2	G	]7:84080562]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GCAGCTTATAATTCTTT;MAPQ=60;MATEID=410862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_84059501_84084501_52C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:31:12.6:138.6,12.6,0:46:0:-138.6:138.6
7	85417192	411352:1	T	]7:85451315]T	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=411352:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:85417192(-)-7:85451315(+)__7_85431501_85456501D;SPAN=34123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07
7	85451315	411352:2	A	A[7:85417192[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=411352:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:85417192(-)-7:85451315(+)__7_85431501_85456501D;SPAN=34123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07
7	87380246	412124:1	C	]7:87380395]C	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=412124:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_87367001_87392001_74C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:82:66.2:66.2,0,138.8:27:0:-66.08:67.55
7	87380395	412124:2	G	G[7:87380246[	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=412124:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_87367001_87392001_74C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:82:66.2:66.2,0,138.8:27:0:-66.08:67.55
7	89181391	412757:2	T	]7:79125345]T	47	PASS	EVDNC=ASSMB;INSERTION=CCCACCAGTTGTTTCAGTGCTGTAG;MAPQ=60;MATEID=412757:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_89180001_89205001_22C;SPAN=10056046;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6
7	89377687	412890:2	T	]7:80603145]T	31	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=412890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_89376001_89401001_13C;SPAN=8774542;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:12:0:-31.74:31.78
7	89969570	413136:1	T	T[7:89969875[	88	PASS	EVDNC=ASSMB;HOMSEQ=GACCTTATTCTT;MAPQ=60;MATEID=413136:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_89964001_89989001_156C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:38:5.9:88.4,0,5.9:30:0:-92.39:92.39
7	89969875	413136:2	G	]7:89969570]G	88	PASS	EVDNC=ASSMB;HOMSEQ=GACCTTATTCTT;MAPQ=60;MATEID=413136:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_89964001_89989001_156C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:38:5.9:88.4,0,5.9:30:0:-92.39:92.39
7	90181095	413225:1	C	C[7:90183286[	50	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=413225:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_90160001_90185001_65C;SPAN=2191;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
7	90183286	413225:2	G	]7:90181095]G	50	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=58;MATEID=413225:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_90160001_90185001_65C;SPAN=2191;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
7	92838560	414210:1	C	C]7:93538835]	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=414210:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:92838560(+)-7:93538835(+)__7_92830501_92855501D;SPAN=700275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:0:14:-37.78:37.78
7	93347523	565388:1	A	]10:110418405]A	72	PASS	DISC_MAPQ=20;EVDNC=ASDIS;MAPQ=60;MATEID=565388:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_110397001_110422001_54C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:12:6.6:72.6,6.6,0:14:15:-72.62:72.62
7	93538835	414210:2	T	T]7:92838560]	37	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=414210:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:92838560(+)-7:93538835(+)__7_92830501_92855501D;SPAN=700275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:0:14:-37.78:37.78
7	93787629	414547:1	T	T[7:93793680[	69	PASS	EVDNC=ASSMB;HOMSEQ=TAATCATCATTCTT;MAPQ=60;MATEID=414547:2;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_7_93786001_93811001_47C;SPAN=6051;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:17:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	93793680	414547:2	T	]7:93787629]T	69	PASS	EVDNC=ASSMB;HOMSEQ=TAATCATCATTCTT;MAPQ=60;MATEID=414547:1;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_7_93786001_93811001_47C;SPAN=6051;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:17:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	93912504	414574:1	C	C[7:93913228[	37	PASS	DISC_MAPQ=36;EVDNC=ASDIS;INSERTION=CAA;MAPQ=60;MATEID=414574:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_93908501_93933501_70C;SPAN=724;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:6:11:-38.44:38.44
7	93913228	414574:2	T	]7:93912504]T	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAA;MAPQ=60;MATEID=414574:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_93908501_93933501_70C;SPAN=724;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:6:11:-38.44:38.44
7	94308706	414626:1	T	]17:61570856]T	24	PASS	EVDNC=ASSMB;INSERTION=GACTTGCTCT;MAPQ=60;MATEID=414626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_94300501_94325501_8C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
7	94467518	461134:1	A	]8:86399769]A	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=461134:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_86387001_86412001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:11:11:-37.05:37.05
7	95756956	415049:1	T	T[7:95757273[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCATTGGATTTGTT;MAPQ=60;MATEID=415049:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_7_95746001_95771001_72C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:25:14.7:161.7,14.7,0:40:18:-161.7:161.7
7	95757273	415049:2	C	]7:95756956]C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCATTGGATTTGTT;MAPQ=60;MATEID=415049:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_7_95746001_95771001_72C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:25:14.7:161.7,14.7,0:40:18:-161.7:161.7
7	96846589	415398:1	C	C[7:96852683[	92	PASS	EVDNC=ASSMB;HOMSEQ=GCAACTGGAACTTTC;MAPQ=60;MATEID=415398:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_96848501_96873501_26C;SPAN=6094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:25:8.4:92.4,8.4,0:30:0:-92.42:92.42
7	96852683	415398:2	G	]7:96846589]G	92	PASS	EVDNC=ASSMB;HOMSEQ=GCAACTGGAACTTTC;MAPQ=60;MATEID=415398:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_96848501_96873501_26C;SPAN=6094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:25:8.4:92.4,8.4,0:30:0:-92.42:92.42
7	97260359	415757:1	A	A[7:97999493[	46	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=44;MATEID=415757:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97975501_98000501_51C;SPAN=739134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	97265435	415571:1	T	T[7:97265662[	69	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACCTCAGTCCTT;MAPQ=60;MATEID=415571:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97265001_97290001_19C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	97265662	415571:2	A	]7:97265435]A	69	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACCTCAGTCCTT;MAPQ=60;MATEID=415571:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97265001_97290001_19C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
7	97805476	415701:1	C	C[7:97806091[	75	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGGAGAATCCCTTGAACCCGGGAGGC;MAPQ=60;MATEID=415701:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_97804001_97829001_6C;SPAN=615;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:17:6.9:75.9,6.9,0:17:18:-75.92:75.92
7	97806091	415701:2	A	]7:97805476]A	75	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=AGGAGAATCCCTTGAACCCGGGAGGC;MAPQ=60;MATEID=415701:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_97804001_97829001_6C;SPAN=615;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:17:6.9:75.9,6.9,0:17:18:-75.92:75.92
7	97999493	415757:2	A	]7:97260359]A	46	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=415757:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97975501_98000501_51C;SPAN=739134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	98344850	62784:2	C	C]1:232116541]	46	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=GATTCTCCTGCCTCA;MAPQ=35;MATEID=62784:1;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_1_232113001_232138001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:14:2:-46.21:46.21
7	98547954	416031:1	A	]7:98548572]A	64	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=416031:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:98547954(-)-7:98548572(+)__7_98539001_98564001D;SPAN=618;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:53:64.4:64.4,0,67.7:0:24:-64.33:64.34
7	98548572	416031:2	C	C[7:98547954[	64	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=416031:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:98547954(-)-7:98548572(+)__7_98539001_98564001D;SPAN=618;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:53:64.4:64.4,0,67.7:0:24:-64.33:64.34
7	100458672	426184:1	T	]7:129517338]T	52	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCCCAGCACTTTGGGAGGCCGAGG;INSERTION=CCAGGTGCAGTGGCTCACACCTGTAT;MAPQ=17;MATEID=426184:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_129507001_129532001_32C;SPAN=29058666;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81
7	100470421	416704:2	A	[1:228154057[A	79	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=416704:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100450001_100475001_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:15:7.2:79.2,7.2,0:14:19:-79.22:79.22
7	100658692	62042:2	G	]1:228212126]G	20	PASS	EVDNC=ASSMB;INSERTION=TGGAGGGTTTGGGAGCCTGTCCA;MAPQ=60;MATEID=62042:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_228193001_228218001_63C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
7	100729963	416768:1	T	T[7:100743094[	93	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GCTCACTGCAACCT;MAPQ=60;MATEID=416768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100719501_100744501_39C;SPAN=13131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:44:17.3:93.2,0,17.3:23:15:-96.2:96.2
7	100743094	416768:2	G	]7:100729963]G	93	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCTCACTGCAACCT;MAPQ=60;MATEID=416768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100719501_100744501_39C;SPAN=13131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:44:17.3:93.2,0,17.3:23:15:-96.2:96.2
7	100770427	416800:1	C	[7:100773213[C	8	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=416800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100768501_100793501_79C;SPAN=2786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:66:8:8,0,156.5:6:7:-7.856:16.09
7	100773213	416800:2	A	[7:100770427[A	8	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=416800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100768501_100793501_79C;SPAN=2786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:66:8:8,0,156.5:6:7:-7.856:16.09
7	100788247	416796:2	G	G[7:57352716[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=416796:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57352716(-)-7:100788247(+)__7_100768501_100793501D;SPAN=43435531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42
7	100804168	416828:1	T	T[7:100804454[	0	PASS	EVDNC=ASSMB;HOMSEQ=ACAGGCACGCACCACCATGCCCAGCTAATTTTT;MAPQ=60;MATEID=416828:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100793001_100818001_64C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:60:3.6:0,3.6,158.4:4:0:3.662:6.956
7	100804454	416828:2	A	]7:100804168]A	0	PASS	EVDNC=ASSMB;HOMSEQ=ACAGGCACGCACCACCATGCCCAGCTAATTTTT;MAPQ=60;MATEID=416828:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100793001_100818001_64C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:60:3.6:0,3.6,158.4:4:0:3.662:6.956
7	100867063	417117:1	G	G[7:101077595[	42	PASS	EVDNC=ASSMB;INSERTION=GACTAATTCC;MAPQ=60;MATEID=417117:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_101062501_101087501_16C;SPAN=210532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:26:22.4:42.2,0,22.4:15:0:-42.5:42.5
7	100961967	417018:1	T	T[7:100962263[	63	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTTACCT;MAPQ=60;MATEID=417018:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_100940001_100965001_355C;SPAN=296;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:45:50:63.2,0,50:23:0:-63.36:63.36
7	100962263	417018:2	A	]7:100961967]A	63	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTTACCT;MAPQ=60;MATEID=417018:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_100940001_100965001_355C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:45:50:63.2,0,50:23:0:-63.36:63.36
7	101055231	406698:2	A	A]7:75759979]	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=406698:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:75759979(+)-7:101055231(+)__7_75754001_75779001D;SPAN=25295252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:0:9:-21.84:22.4
7	101077595	417117:2	C	]7:100867063]C	42	PASS	EVDNC=ASSMB;INSERTION=GACTAATTCC;MAPQ=60;MATEID=417117:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_101062501_101087501_16C;SPAN=210532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:26:22.4:42.2,0,22.4:15:0:-42.5:42.5
7	101357985	417375:1	T	T[7:101360515[	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAATTTTTGTATTTTT;MAPQ=60;MATEID=417375:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_101356501_101381501_58C;SPAN=2530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7
7	101360515	417375:2	C	]7:101357985]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAATTTTTGTATTTTT;MAPQ=60;MATEID=417375:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_101356501_101381501_58C;SPAN=2530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7
7	101415969	417445:1	T	T[7:101416963[	70	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=417445:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:101415969(+)-7:101416963(-)__7_101405501_101430501D;SPAN=994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:44:40.4:70.1,0,40.4:0:25:-70.58:70.58
7	101416963	417445:2	A	]7:101415969]A	70	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=417445:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:101415969(+)-7:101416963(-)__7_101405501_101430501D;SPAN=994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:44:40.4:70.1,0,40.4:0:25:-70.58:70.58
7	101463616	400347:2	T	T]7:65398431]	58	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=400347:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65398431(+)-7:101463616(+)__7_65390501_65415501D;SPAN=36065185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:0:20:-60.44:60.44
7	101690931	417617:1	T	T[7:101691236[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACCTGGCTCATTTTT;MAPQ=60;MATEID=417617:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_101675001_101700001_67C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:12:7:-46.21:46.21
7	101691236	417617:2	C	]7:101690931]C	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACCTGGCTCATTTTT;MAPQ=60;MATEID=417617:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_101675001_101700001_67C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:12:7:-46.21:46.21
7	102703463	407669:2	T	[7:77167731[T	9	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=407669:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:77167731(-)-7:102703463(-)__7_77150501_77175501D;SPAN=25535732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5
7	102848273	418158:1	G	G[7:102848597[	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATACACATTCG;MAPQ=60;MATEID=418158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_102826501_102851501_41C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:84:0.3:0,0.3,211.2:7:0:0.5047:12.88
7	102848597	418158:2	A	]7:102848273]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATACACATTCG;MAPQ=60;MATEID=418158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_102826501_102851501_41C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:84:0.3:0,0.3,211.2:7:0:0.5047:12.88
7	104489080	418722:1	T	T[7:104489349[	82	PASS	EVDNC=ASSMB;HOMSEQ=GTGCTGAAATCTT;MAPQ=60;MATEID=418722:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_104468001_104493001_3C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:24:7.5:82.5,7.5,0:27:0:-82.52:82.52
7	104489349	418722:2	G	]7:104489080]G	82	PASS	EVDNC=ASSMB;HOMSEQ=GTGCTGAAATCTT;MAPQ=60;MATEID=418722:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_104468001_104493001_3C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:24:7.5:82.5,7.5,0:27:0:-82.52:82.52
7	104546954	418744:1	A	A[7:104547269[	59	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATAGTAGCTCAA;MAPQ=60;MATEID=418744:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_104541501_104566501_49C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15
7	104547269	418744:2	A	]7:104546954]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATAGTAGCTCAA;MAPQ=60;MATEID=418744:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_104541501_104566501_49C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15
7	105520479	419121:1	G	[7:105521175[G	8	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGGC;MAPQ=60;MATEID=419121:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_105497001_105522001_197C;SPAN=696;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:5:3:-8.844:12.73
7	105521175	419121:2	G	[7:105520479[G	8	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGGC;MAPQ=60;MATEID=419121:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_105497001_105522001_197C;SPAN=696;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:39:8.9:8.9,0,88.1:5:3:-8.844:12.73
7	106074072	419438:1	C	]7:106208676]C	48	PASS	DISC_MAPQ=53;EVDNC=TSI_L;INSERTION=TA;MAPQ=60;MATEID=419438:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=134604;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:13:9:-49.68:49.68
7	106074178	419439:1	C	C[7:106081493[	46	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCACC;INSERTION=TA;MAPQ=60;MATEID=419439:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_7_106207501_106232501_21C;SPAN=7315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:0:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	106081493	419441:1	T	]7:106208676]T	55	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCACC;INSERTION=TACCATTGGACAGCCATACTCCAGGGAAAGGTCATTTTCCCACTCCATCCGCTTTCCGGCTCCCTGCTGACAGCCACCTCCACCACTCAATAAAACCCCCACAT;MAPQ=60;MATEID=419441:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=127183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:26:9.2:55.4,0,9.2:19:0:-57.2:57.2
7	106081493	419439:2	T	]7:106074178]T	46	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCACC;INSERTION=TA;MAPQ=60;MATEID=419439:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_7_106207501_106232501_21C;SPAN=7315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:0:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	106093547	419392:1	C	C[7:106093883[	80	PASS	EVDNC=ASSMB;HOMSEQ=CAC;MAPQ=60;MATEID=419392:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_106085001_106110001_69C;SPAN=336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
7	106093883	419392:2	C	]7:106093547]C	80	PASS	EVDNC=ASSMB;HOMSEQ=CAC;MAPQ=60;MATEID=419392:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_106085001_106110001_69C;SPAN=336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
7	106208676	419441:2	T	T[7:106081493[	55	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCACC;INSERTION=TACCATTGGACAGCCATACTCCAGGGAAAGGTCATTTTCCCACTCCATCCGCTTTCCGGCTCCCTGCTGACAGCCACCTCCACCACTCAATAAAACCCCCACAT;MAPQ=60;MATEID=419441:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=127183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:26:9.2:55.4,0,9.2:19:0:-57.2:57.2
7	106208676	419438:2	T	T[7:106074072[	48	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=TA;MAPQ=60;MATEID=419438:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=134604;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:13:9:-49.68:49.68
7	107823624	419930:1	A	A[7:107824295[	95	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=419930:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_107800001_107825001_4C;SPAN=671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:25:8.7:95.7,8.7,0:32:0:-95.72:95.72
7	107824295	419930:2	G	]7:107823624]G	95	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=419930:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_107800001_107825001_4C;SPAN=671;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:25:8.7:95.7,8.7,0:32:0:-95.72:95.72
7	108712413	420213:1	A	A[7:108712728[	7	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGGAAAGA;MAPQ=60;MATEID=420213:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_108706501_108731501_59C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:21:7.4:7.4,0,43.7:4:0:-7.301:8.898
7	108712728	420213:2	A	]7:108712413]A	7	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGGAAAGA;MAPQ=60;MATEID=420213:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_108706501_108731501_59C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:21:7.4:7.4,0,43.7:4:0:-7.301:8.898
7	109796632	420517:1	T	T[7:109813845[	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=420517:2;MATENM=8;NM=5;NUMPARTS=2;SCTG=c_7_109809001_109834001_9C;SPAN=17213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:9:13.5:148.5,13.5,0:27:35:-148.5:148.5
7	109813845	420517:2	T	]7:109796632]T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=420517:1;MATENM=5;NM=8;NUMPARTS=2;SCTG=c_7_109809001_109834001_9C;SPAN=17213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:9:13.5:148.5,13.5,0:27:35:-148.5:148.5
7	110541911	420747:1	T	T[7:110548376[	19	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=420747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_110544001_110569001_88C;SPAN=6465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:7:1.8:19.8,1.8,0:7:0:-19.8:19.8
7	110548376	420747:2	T	]7:110541911]T	19	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=420747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_110544001_110569001_88C;SPAN=6465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:7:1.8:19.8,1.8,0:7:0:-19.8:19.8
7	111002957	420853:1	A	A[7:111065631[	20	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=420853:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111058501_111083501_11C;SPAN=62674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82
7	111065631	420853:2	A	]7:111002957]A	20	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=420853:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111058501_111083501_11C;SPAN=62674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82
7	111077514	420873:1	G	G[7:111178811[	29	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=420873:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111156501_111181501_10C;SPAN=101297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
7	111113982	420868:1	A	A[7:111115536[	32	PASS	EVDNC=ASSMB;INSERTION=TAAAGAGAGTGTAAA;MAPQ=60;MATEID=420868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111107501_111132501_10C;SPAN=1554;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
7	111115536	420868:2	T	]7:111113982]T	32	PASS	EVDNC=ASSMB;INSERTION=TAAAGAGAGTGTAAA;MAPQ=60;MATEID=420868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111107501_111132501_10C;SPAN=1554;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
7	111178811	420873:2	T	]7:111077514]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=420873:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111156501_111181501_10C;SPAN=101297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
7	111413698	420918:1	A	A[12:107809482[	75	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=420918:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_111401501_111426501_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92
7	111682701	916278:1	G	]22:28669482]G	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=916278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_206C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:102:5.4:0,5.4,267.3:7:2:5.564:12.26
7	113776121	421472:1	T	T[7:113782153[	75	PASS	EVDNC=ASSMB;HOMSEQ=CATAATGGCATTTTT;MAPQ=60;MATEID=421472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_113778001_113803001_26C;SPAN=6032;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92
7	113782153	421472:2	C	]7:113776121]C	75	PASS	EVDNC=ASSMB;HOMSEQ=CATAATGGCATTTTT;MAPQ=60;MATEID=421472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_113778001_113803001_26C;SPAN=6032;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92
7	114313463	421622:1	C	C[7:114313759[	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAAATATTGTC;MAPQ=60;MATEID=421622:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_114292501_114317501_13C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
7	114313759	421622:2	A	]7:114313463]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAAATATTGTC;MAPQ=60;MATEID=421622:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_114292501_114317501_13C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
7	117201963	422406:1	T	T[7:117202261[	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCGAAGCTATCTT;MAPQ=60;MATEID=422406:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_117183501_117208501_4C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:13:12:-72.62:72.62
7	117202261	422406:2	C	]7:117201963]C	72	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCGAAGCTATCTT;MAPQ=60;MATEID=422406:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_117183501_117208501_4C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:13:12:-72.62:72.62
7	118253913	422590:1	C	C[7:118254199[	46	PASS	EVDNC=ASSMB;HOMSEQ=CATCCTTGTGTATTTTC;MAPQ=60;MATEID=422590:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_118237001_118262001_43C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
7	118254199	422590:2	C	]7:118253913]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CATCCTTGTGTATTTTC;MAPQ=60;MATEID=422590:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_118237001_118262001_43C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
7	119191314	422887:1	A	A[7:119194700[	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=422887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:119191314(+)-7:119194700(-)__7_119192501_119217501D;SPAN=3386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:7:8.4:92.4,8.4,0:0:30:-92.42:92.42
7	119194700	422887:2	G	]7:119191314]G	92	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=422887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:119191314(+)-7:119194700(-)__7_119192501_119217501D;SPAN=3386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:7:8.4:92.4,8.4,0:0:30:-92.42:92.42
7	120983381	423222:2	C	C[6:70153588[	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:70153588(-)-7:120983381(+)__7_120981001_121006001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71
7	121241062	423316:1	G	G[7:121241381[	64	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGAAATTATAAAACAG;MAPQ=60;MATEID=423316:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_121226001_121251001_119C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:29:8.3:64.4,0,8.3:18:7:-66.94:66.94
7	121241381	423316:2	A	]7:121241062]A	64	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGAAATTATAAAACAG;MAPQ=60;MATEID=423316:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_121226001_121251001_119C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:29:8.3:64.4,0,8.3:18:7:-66.94:66.94
7	121522363	423406:1	C	[7:121522547[C	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423406:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:121522363(-)-7:121522547(-)__7_121520001_121545001D;SPAN=184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:0:10:-26.83:26.83
7	121522547	423406:2	A	[7:121522363[A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423406:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:121522363(-)-7:121522547(-)__7_121520001_121545001D;SPAN=184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:0:10:-26.83:26.83
7	122571822	423890:1	T	T[7:122796082[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=423890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_122794001_122819001_30C;SPAN=224260;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21
7	122796082	423890:2	G	]7:122571822]G	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=423890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_122794001_122819001_30C;SPAN=224260;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21
7	123137650	424046:1	G	]7:123249081]G	18	PASS	EVDNC=ASSMB;INSERTION=CCCGGAAGGT;MAPQ=60;MATEID=424046:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_123235001_123260001_45C;SPAN=111431;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
7	123249081	424046:2	A	A[7:123137650[	18	PASS	EVDNC=ASSMB;INSERTION=CCCGGAAGGT;MAPQ=60;MATEID=424046:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_123235001_123260001_45C;SPAN=111431;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
7	123280266	424085:1	A	]7:123375157]A	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=424085:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:123280266(-)-7:123375157(+)__7_123357501_123382501D;SPAN=94891;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99
7	123375157	424085:2	C	C[7:123280266[	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=424085:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:123280266(-)-7:123375157(+)__7_123357501_123382501D;SPAN=94891;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99
7	125624166	634200:1	C	C[12:73620587[	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATA;MAPQ=60;MATEID=634200:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_12_73598001_73623001_3C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:24:6.9:75.9,6.9,0:24:7:-75.92:75.92
7	126105456	425065:1	G	]7:126150623]G	18	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=425065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_126150501_126175501_8C;SPAN=45167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
7	126150623	425065:2	T	T[7:126105456[	18	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=425065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_126150501_126175501_8C;SPAN=45167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15
7	128126376	425599:1	T	T[7:128126677[	59	PASS	EVDNC=ASSMB;HOMSEQ=GGGCACAGCATCTT;MAPQ=60;MATEID=425599:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128110501_128135501_5C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:16:5.4:59.4,5.4,0:20:0:-59.41:59.41
7	128126677	425599:2	G	]7:128126376]G	59	PASS	EVDNC=ASSMB;HOMSEQ=GGGCACAGCATCTT;MAPQ=60;MATEID=425599:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128110501_128135501_5C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:16:5.4:59.4,5.4,0:20:0:-59.41:59.41
7	128669172	425900:1	T	T[7:128669476[	41	PASS	EVDNC=ASSMB;HOMSEQ=TGAACACCAGCTCTT;MAPQ=60;MATEID=425900:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128649501_128674501_79C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
7	128669476	425900:2	T	]7:128669172]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TGAACACCAGCTCTT;MAPQ=60;MATEID=425900:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128649501_128674501_79C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
7	129202957	426099:1	C	C[7:129204303[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=426099:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_129188501_129213501_47C;SPAN=1346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:5:8:-23.24:23.37
7	129204303	426099:2	A	]7:129202957]A	23	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=426099:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_129188501_129213501_47C;SPAN=1346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:5:8:-23.24:23.37
7	129517338	426184:2	G	G[7:100458672[	52	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCCCAGCACTTTGGGAGGCCGAGG;INSERTION=CCAGGTGCAGTGGCTCACACCTGTAT;MAPQ=60;MATEID=426184:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_129507001_129532001_32C;SPAN=29058666;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81
7	131224139	426882:1	A	]7:131224307]A	18	PASS	EVDNC=ASSMB;HOMSEQ=ACCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=426882:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_131222001_131247001_28C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76
7	131224307	426882:2	A	A[7:131224139[	18	PASS	EVDNC=ASSMB;HOMSEQ=ACCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=426882:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_131222001_131247001_28C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76
7	133151419	427472:1	T	T[7:133151590[	8	PASS	EVDNC=ASSMB;INSERTION=CAGGGCCACA;MAPQ=60;MATEID=427472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_133133001_133158001_28C;SPAN=171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:19:8:8,0,37.7:4:0:-7.863:9.094
7	133151590	427472:2	G	]7:133151419]G	8	PASS	EVDNC=ASSMB;INSERTION=CAGGGCCACA;MAPQ=60;MATEID=427472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_133133001_133158001_28C;SPAN=171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:19:8:8,0,37.7:4:0:-7.863:9.094
7	133422936	427543:1	A	A[7:133423251[	22	PASS	EVDNC=ASSMB;HOMSEQ=AATAGAATTAATGGAGCA;MAPQ=60;MATEID=427543:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_133402501_133427501_32C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
7	133423251	427543:2	A	]7:133422936]A	22	PASS	EVDNC=ASSMB;HOMSEQ=AATAGAATTAATGGAGCA;MAPQ=60;MATEID=427543:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_133402501_133427501_32C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
7	133435161	427546:1	A	A[8:103863624[	42	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=427546:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_133427001_133452001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91
7	134739891	427922:1	C	[9:108352880[C	26	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TAAAATTATG;MAPQ=60;MATEID=427922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_134725501_134750501_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:8:2:-26.41:26.41
7	137149719	428770:1	T	T[7:137150005[	52	PASS	EVDNC=ASSMB;HOMSEQ=GACAAAGGACAATTCTT;MAPQ=60;MATEID=428770:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_137126501_137151501_31C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81
7	137150005	428770:2	G	]7:137149719]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GACAAAGGACAATTCTT;MAPQ=60;MATEID=428770:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_137126501_137151501_31C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81
7	137638467	428909:1	T	]7:137638575]T	31	PASS	EVDNC=ASSMB;HOMSEQ=TATATATGTGTGTATATATATACACACATATAT;MAPQ=60;MATEID=428909:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_7_137616501_137641501_8C;SECONDARY;SPAN=108;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
7	137638575	428909:2	T	T[7:137638467[	31	PASS	EVDNC=ASSMB;HOMSEQ=TATATATGTGTGTATATATATACACACATATAT;MAPQ=60;MATEID=428909:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_7_137616501_137641501_8C;SECONDARY;SPAN=108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
7	138615526	429186:1	A	A[7:138615753[	46	PASS	EVDNC=ASSMB;HOMSEQ=CCACTGCACTCCA;MAPQ=60;MATEID=429186:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_138596501_138621501_46C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21
7	138615753	429186:2	C	]7:138615526]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CCACTGCACTCCA;MAPQ=60;MATEID=429186:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_138596501_138621501_46C;SPAN=227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21
7	139057536	429380:1	T	T[7:139057840[	66	PASS	EVDNC=ASSMB;HOMSEQ=AACAATTACATTTT;MAPQ=60;MATEID=429380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_139037501_139062501_16C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:22:6:66,6,0:20:0:-64.93:64.93
7	139057840	429380:2	A	]7:139057536]A	66	PASS	EVDNC=ASSMB;HOMSEQ=AACAATTACATTTT;MAPQ=60;MATEID=429380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_139037501_139062501_16C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:22:6:66,6,0:20:0:-64.93:64.93
7	141414080	429954:1	T	T[7:141414383[	52	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAAACATCATTTTT;MAPQ=60;MATEID=429954:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_141414001_141439001_66C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:20:2.1:52.8,2.1,0:17:0:-53.67:53.67
7	141414383	429954:2	C	]7:141414080]C	52	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAAACATCATTTTT;MAPQ=60;MATEID=429954:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_141414001_141439001_66C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:20:2.1:52.8,2.1,0:17:0:-53.67:53.67
7	142060063	430145:1	T	]7:142086470]T	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=430145:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060063(-)-7:142086470(+)__7_142075501_142100501D;SPAN=26407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	142060773	430146:1	A	A[7:142087080[	26	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=430146:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060773(+)-7:142087080(-)__7_142075501_142100501D;SPAN=26307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
7	142086470	430145:2	G	G[7:142060063[	42	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=430145:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060063(-)-7:142086470(+)__7_142075501_142100501D;SPAN=26407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
7	142087080	430146:2	T	]7:142060773]T	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=430146:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060773(+)-7:142087080(-)__7_142075501_142100501D;SPAN=26307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
7	142578304	430476:1	A	A[7:142617917[	26	PASS	EVDNC=ASSMB;INSERTION=CCGCC;MAPQ=60;MATEID=430476:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_142614501_142639501_55C;SPAN=39613;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29
7	142617917	430476:2	A	]7:142578304]A	26	PASS	EVDNC=ASSMB;INSERTION=CCGCC;MAPQ=60;MATEID=430476:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_142614501_142639501_55C;SPAN=39613;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29
7	144800296	431053:1	A	A]7:144860189]	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=431053:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:144800296(+)-7:144860189(+)__7_144844001_144869001D;SPAN=59893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
7	144860189	431053:2	G	G]7:144800296]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=431053:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:144800296(+)-7:144860189(+)__7_144844001_144869001D;SPAN=59893;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
7	146423113	431501:1	T	T[7:146423454[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGA;MAPQ=60;MATEID=431501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_3C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:9:6:-35.04:35.04
7	146423113	431502:1	T	T[7:146423476[	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGATTTTAGAAGTGTGAAAAAAAAA;MAPQ=60;MATEID=431502:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_14C;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:4:6:-17.13:18.75
7	146423454	431501:2	T	]7:146423113]T	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGA;MAPQ=60;MATEID=431501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_3C;SPAN=341;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:9:6:-35.04:35.04
7	146423476	431502:2	A	]7:146423113]A	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGATTTTAGAAGTGTGAAAAAAAAA;MAPQ=60;MATEID=431502:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_14C;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:4:6:-17.13:18.75
7	146650871	431567:1	A	]7:146657869]A	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACA;MAPQ=60;MATEID=431567:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_146657001_146682001_164C;SPAN=6998;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:9:5:-34.32:34.32
7	146657869	431567:2	A	A[7:146650871[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACA;MAPQ=60;MATEID=431567:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_146657001_146682001_164C;SPAN=6998;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:9:5:-34.32:34.32
7	147118431	431713:1	A	]7:147118535]A	64	PASS	EVDNC=ASSMB;HOMSEQ=ACTTT;MAPQ=60;MATEID=431713:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_147098001_147123001_44C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:53:64.4:64.4,0,67.7:24:0:-64.33:64.34
7	147118535	431713:2	T	T[7:147118431[	64	PASS	EVDNC=ASSMB;HOMSEQ=ACTTT;MAPQ=60;MATEID=431713:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_147098001_147123001_44C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:53:64.4:64.4,0,67.7:24:0:-64.33:64.34
7	147979998	432064:1	C	C[7:147981158[	26	PASS	EVDNC=ASSMB;HOMSEQ=AGC;MAPQ=60;MATEID=432064:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_147980001_148005001_24C;SPAN=1160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83
7	147981158	432064:2	A	]7:147979998]A	26	PASS	EVDNC=ASSMB;HOMSEQ=AGC;MAPQ=60;MATEID=432064:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_147980001_148005001_24C;SPAN=1160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83
7	148375877	432209:1	T	T[7:148379231[	59	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=432209:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:148375877(+)-7:148379231(-)__7_148372001_148397001D;SPAN=3354;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	148379231	432209:2	T	]7:148375877]T	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=432209:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:148375877(+)-7:148379231(-)__7_148372001_148397001D;SPAN=3354;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
7	149121088	432449:1	T	T[7:149121402[	74	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=432449:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_149107001_149132001_6C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:30:1.4:74,0,1.4:20:8:-78.37:78.37
7	149121402	432449:2	T	]7:149121088]T	74	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=432449:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_149107001_149132001_6C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:30:1.4:74,0,1.4:20:8:-78.37:78.37
7	151346416	433173:1	T	T[7:151349025[	16	PASS	EVDNC=ASSMB;HOMSEQ=CCTTT;MAPQ=60;MATEID=433173:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_151336501_151361501_4C;SPAN=2609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22
7	151349025	433173:2	C	]7:151346416]C	16	PASS	EVDNC=ASSMB;HOMSEQ=CCTTT;MAPQ=60;MATEID=433173:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_151336501_151361501_4C;SPAN=2609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22
7	152548284	433615:1	C	C[7:152549219[	72	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=433615:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_152537001_152562001_60C;SPAN=935;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:14:6.6:72.6,6.6,0:24:0:-72.62:72.62
7	152549219	433615:2	C	]7:152548284]C	72	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=433615:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_152537001_152562001_60C;SPAN=935;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:14:6.6:72.6,6.6,0:24:0:-72.62:72.62
7	152555315	433617:1	T	]7:152557061]T	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCAA;MAPQ=60;MATEID=433617:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_152537001_152562001_37C;SPAN=1746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:6:3:-18.82:19.57
7	152557061	433617:2	A	A[7:152555315[	18	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCAA;MAPQ=60;MATEID=433617:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_152537001_152562001_37C;SPAN=1746;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:6:3:-18.82:19.57
7	152584618	433637:1	A	A[7:152587221[	56	PASS	EVDNC=ASSMB;HOMSEQ=CACATGTTTTA;MAPQ=60;MATEID=433637:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152586001_152611001_2C;SPAN=2603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
7	152587221	433637:2	C	]7:152584618]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CACATGTTTTA;MAPQ=60;MATEID=433637:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152586001_152611001_2C;SPAN=2603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
7	152722328	433703:1	T	T[7:152722631[	46	PASS	EVDNC=ASSMB;HOMSEQ=GGATCACTACTTTT;MAPQ=60;MATEID=433703:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152708501_152733501_91C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02
7	152722631	433703:2	G	]7:152722328]G	46	PASS	EVDNC=ASSMB;HOMSEQ=GGATCACTACTTTT;MAPQ=60;MATEID=433703:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152708501_152733501_91C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02
7	153011383	433769:1	A	A[7:153011761[	28	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=433769:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_153002501_153027501_39C;SPAN=378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
7	153011761	433769:2	T	]7:153011383]T	28	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=433769:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_153002501_153027501_39C;SPAN=378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
7	153613053	434011:1	C	C[7:153613733[	75	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTATAAC;MAPQ=60;MATEID=434011:2;MATENM=2;NM=9;NUMPARTS=2;SCTG=c_7_153590501_153615501_41C;SPAN=680;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92
7	153613733	434011:2	A	]7:153613053]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTATAAC;MAPQ=60;MATEID=434011:1;MATENM=9;NM=2;NUMPARTS=2;SCTG=c_7_153590501_153615501_41C;SPAN=680;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92
7	154456858	434314:1	T	T[7:154457985[	62	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=434314:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:154456858(+)-7:154457985(-)__7_154448001_154473001D;SPAN=1127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72
7	154457985	434314:2	A	]7:154456858]A	62	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=434314:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:154456858(+)-7:154457985(-)__7_154448001_154473001D;SPAN=1127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72
7	154600273	434395:1	A	A[7:154608021[	72	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CCAGGCTGGAGTACAGTGGCACAATCTCAGCTCACTGCAAGCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=434395:2;MATENM=18;NM=6;NUMPARTS=2;SCTG=c_7_154595001_154620001_21C;SPAN=7748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:3:6.6:72.6,6.6,0:6:22:-72.62:72.62
7	154608021	434395:2	C	]7:154600273]C	72	PASS	DISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=CCAGGCTGGAGTACAGTGGCACAATCTCAGCTCACTGCAAGCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=434395:1;MATENM=6;NM=18;NUMPARTS=2;SCTG=c_7_154595001_154620001_21C;SPAN=7748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:3:6.6:72.6,6.6,0:6:22:-72.62:72.62
7	155084843	434580:1	C	]7:155088917]C	46	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=434580:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_155085001_155110001_4C;SPAN=4074;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	155085280	434583:1	G	G[7:155088918[	50	PASS	EVDNC=ASSMB;INSERTION=CTTAT;MAPQ=60;MATEID=434583:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_155085001_155110001_15C;SPAN=3638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98
7	155088917	434580:2	C	C[7:155084843[	46	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=434580:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_155085001_155110001_4C;SPAN=4074;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21
7	155088918	434583:2	T	]7:155085280]T	50	PASS	EVDNC=ASSMB;INSERTION=CTTAT;MAPQ=60;MATEID=434583:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_155085001_155110001_15C;SPAN=3638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98
7	155150222	434599:1	A	A[7:155150535[	42	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAGTGGGTGCAA;MAPQ=60;MATEID=434599:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_155134001_155159001_115C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
7	155150535	434599:2	A	]7:155150222]A	42	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAGTGGGTGCAA;MAPQ=60;MATEID=434599:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_155134001_155159001_115C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
7	155891399	435004:1	A	]Un_JTFH01000557v1_decoy:1459]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AGGTGGTGGTGGC;MAPQ=60;MATEID=435004:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_155869001_155894001_89C;SPAN=-1;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08
7	155932667	435025:1	G	G[7:155932869[	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGTGTG;MAPQ=60;MATEID=435025:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_155918001_155943001_73C;SPAN=202;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:12:6:-50.74:50.74
7	155932869	435025:2	A	]7:155932667]A	49	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=ATGTGTG;MAPQ=60;MATEID=435025:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_155918001_155943001_73C;SPAN=202;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:12:6:-50.74:50.74
7	156957886	435424:1	T	]7:156959338]T	59	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=435424:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_156947001_156972001_74C;SPAN=1452;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:25:2.9:59,0,2.9:13:13:-61.85:61.85
7	156958050	435425:1	C	C[7:156959338[	30	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=435425:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_156947001_156972001_77C;SPAN=1288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
7	156959338	435424:2	G	G[7:156957886[	59	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=435424:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_156947001_156972001_74C;SPAN=1452;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:25:2.9:59,0,2.9:13:13:-61.85:61.85
7	156959338	435425:2	G	]7:156958050]G	30	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=435425:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_156947001_156972001_77C;SPAN=1288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
7	158410836	436263:1	T	]7:158410940]T	35	PASS	EVDNC=ASSMB;HOMSEQ=TGGGAGGCCCC;MAPQ=60;MATEID=436263:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_158392501_158417501_21C;SPAN=104;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
7	158410940	436263:2	C	C[7:158410836[	35	PASS	EVDNC=ASSMB;HOMSEQ=TGGGAGGCCCC;MAPQ=60;MATEID=436263:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_158392501_158417501_21C;SPAN=104;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
7	158454926	436501:1	G	]7:158848272]G	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=436501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_158833501_158858501_32C;SPAN=393346;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07
7	158848272	436501:2	C	C[7:158454926[	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=436501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_158833501_158858501_32C;SPAN=393346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07
8	245406	485861:1	G	]9:11384325]G	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=485861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_11368001_11393001_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:4:6:-24.99:24.99
8	644397	436892:1	G	G[8:649415[	52	PASS	EVDNC=ASSMB;INSERTION=CAA;MAPQ=60;MATEID=436892:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_637001_662001_88C;SPAN=5018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:9:4.8:52.8,4.8,0:18:0:-52.81:52.81
8	649415	436892:2	G	]8:644397]G	52	PASS	EVDNC=ASSMB;INSERTION=CAA;MAPQ=60;MATEID=436892:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_637001_662001_88C;SPAN=5018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:9:4.8:52.8,4.8,0:18:0:-52.81:52.81
8	1724902	13008:2	A	[1:53954234[A	26	PASS	DISC_MAPQ=44;EVDNC=TSI_L;HOMSEQ=A;INSERTION=AGCCCAGAGACAGAGCTTTCAAGGTGCCTGCTCAGTTTATGAGCCAAGTTTCTATTCTTTTCTGCATGTGTTT;MAPQ=60;MATEID=13008:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_53949001_53974001_174C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:93:26.9:26.9,0,205.1:16:3:-26.67:34.81
8	2085602	437510:1	C	C[8:2086130[	62	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CACTGTCGTGATCTCCGCGTGGCCCCCCACTGTTGTGATCTCTGCGTGGCCCCACTGTCGTGATCTCTGCGTGGCCCCACTGTTGTGATCTTTGCGTGGCCCCACTGTC;MAPQ=60;MATEID=437510:2;MATENM=31;NM=4;NUMPARTS=3;SCTG=c_8_2082501_2107501_114C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:4:5.7:62.7,5.7,0:3:18:-62.72:62.72
8	2086130	437510:2	C	]8:2085602]C	62	PASS	DISC_MAPQ=16;EVDNC=TSI_L;HOMSEQ=CACTGTCGTGATCTCCGCGTGGCCCCCCACTGTTGTGATCTCTGCGTGGCCCCACTGTCGTGATCTCTGCGTGGCCCCACTGTTGTGATCTTTGCGTGGCCCCACTGTC;MAPQ=60;MATEID=437510:1;MATENM=4;NM=31;NUMPARTS=3;SCTG=c_8_2082501_2107501_114C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:4:5.7:62.7,5.7,0:3:18:-62.72:62.72
8	3115324	437859:1	C	]8:3153710]C	17	PASS	EVDNC=ASSMB;HOMSEQ=CCCAGG;MAPQ=60;MATEID=437859:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_3136001_3161001_36C;SPAN=38386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56
8	3153710	437859:2	G	G[8:3115324[	17	PASS	EVDNC=ASSMB;HOMSEQ=CCCAGG;MAPQ=60;MATEID=437859:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_3136001_3161001_36C;SPAN=38386;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56
8	3926369	438321:1	C	C[8:3927626[	44	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=438321:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_3920001_3945001_99C;SPAN=1257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:15:0:-45.49:45.49
8	3927626	438321:2	C	]8:3926369]C	44	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=438321:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_3920001_3945001_99C;SPAN=1257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:15:0:-45.49:45.49
8	4137359	438395:1	T	T[8:4137824[	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATGTCAC;MAPQ=60;MATEID=438395:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_8_4116001_4141001_71C;SPAN=465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:12:6:-45.49:45.49
8	4137824	438395:2	A	]8:4137359]A	44	PASS	DISC_MAPQ=48;EVDNC=ASDIS;INSERTION=ATGTCAC;MAPQ=60;MATEID=438395:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_8_4116001_4141001_71C;SPAN=465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:12:6:-45.49:45.49
8	4265362	438458:1	T	T[8:4267451[	31	PASS	EVDNC=ASSMB;INSERTION=TACATAATAATAT;MAPQ=60;MATEID=438458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_4263001_4288001_41C;SPAN=2089;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31
8	4267451	438458:2	A	]8:4265362]A	31	PASS	EVDNC=ASSMB;INSERTION=TACATAATAATAT;MAPQ=60;MATEID=438458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_4263001_4288001_41C;SPAN=2089;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31
8	4686301	438597:1	T	T[8:4686729[	49	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=438597:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_4679501_4704501_79C;SPAN=428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
8	4686729	438597:2	C	]8:4686301]C	49	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=438597:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_4679501_4704501_79C;SPAN=428;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
8	5083713	438785:1	A	A[8:5083999[	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGATGGAAGTA;MAPQ=60;MATEID=438785:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_5071501_5096501_19C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
8	5083999	438785:2	A	]8:5083713]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGATGGAAGTA;MAPQ=60;MATEID=438785:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_5071501_5096501_19C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
8	5737994	439044:1	C	C[8:5748258[	21	PASS	EVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=439044:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_8_5733001_5758001_8C;SPAN=10264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4
8	5748258	439044:2	T	]8:5737994]T	21	PASS	EVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=439044:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_8_5733001_5758001_8C;SPAN=10264;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4
8	5890665	439087:1	A	A[8:5890984[	38	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGGAGA;MAPQ=60;MATEID=439087:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_5880001_5905001_64C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
8	5890984	439087:2	A	]8:5890665]A	38	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATGGAGA;MAPQ=60;MATEID=439087:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_5880001_5905001_64C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
8	6678940	439496:2	A	[1:59491056[A	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA;MAPQ=60;MATEID=439496:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_6664001_6689001_35C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91
8	6933349	439600:1	A	A[8:6933672[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGCTTAGGAAAAACAGTG;MAPQ=60;MATEID=439600:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_6933501_6958501_69C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:7:9:99,9,0:24:12:-99.02:99.02
8	6933672	439600:2	C	]8:6933349]C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGCTTAGGAAAAACAGTG;MAPQ=60;MATEID=439600:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_6933501_6958501_69C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:7:9:99,9,0:24:12:-99.02:99.02
8	7134147	439657:1	G	G[8:7137881[	52	PASS	EVDNC=ASSMB;HOMSEQ=TGCCTGG;MAPQ=59;MATEID=439657:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_7129501_7154501_89C;SPAN=3734;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81
8	7137881	439657:2	T	]8:7134147]T	52	PASS	EVDNC=ASSMB;HOMSEQ=TGCCTGG;MAPQ=60;MATEID=439657:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_7129501_7154501_89C;SPAN=3734;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81
8	11388052	441018:1	G	G[8:11389699[	72	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=441018:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_11368001_11393001_58C;SPAN=1647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62
8	11389699	441018:2	A	]8:11388052]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=441018:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_11368001_11393001_58C;SPAN=1647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62
8	11930717	441301:1	A	]8:12035858]A	69	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=441301:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:11930717(-)-8:12035858(+)__8_12029501_12054501D;SPAN=105141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:14:6.3:69.3,6.3,0:0:23:-69.32:69.32
8	12035858	441301:2	T	T[8:11930717[	69	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=441301:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:11930717(-)-8:12035858(+)__8_12029501_12054501D;SPAN=105141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:14:6.3:69.3,6.3,0:0:23:-69.32:69.32
8	12570090	441563:1	A	]8:12628231]A	26	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=441563:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570090(-)-8:12628231(+)__8_12568501_12593501D;SPAN=58141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
8	12570404	441566:1	A	A[8:12575326[	39	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=441566:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570404(+)-8:12575326(-)__8_12568501_12593501D;SPAN=4922;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:61:39.2:39.2,0,111.8:0:17:-38.97:41.04
8	12575326	441566:2	T	]8:12570404]T	39	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=441566:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570404(+)-8:12575326(-)__8_12568501_12593501D;SPAN=4922;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:61:39.2:39.2,0,111.8:0:17:-38.97:41.04
8	12628231	441563:2	T	T[8:12570090[	26	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=441563:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570090(-)-8:12628231(+)__8_12568501_12593501D;SPAN=58141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
8	13312080	441914:1	G	G[8:13312384[	2	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATAATTTCTTTAG;MAPQ=60;MATEID=441914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_13303501_13328501_75C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:51:2.3:2.3,0,124.4:5:0:-2.169:9.566
8	13312384	441914:2	A	]8:13312080]A	2	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATAATTTCTTTAG;MAPQ=60;MATEID=441914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_13303501_13328501_75C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:51:2.3:2.3,0,124.4:5:0:-2.169:9.566
8	14101377	442359:1	G	]8:14101564]G	35	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=442359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_14087501_14112501_40C;SPAN=187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
8	14101564	442359:2	G	G[8:14101377[	35	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=442359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_14087501_14112501_40C;SPAN=187;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49
8	15143770	442750:1	T	T[8:15144078[	92	PASS	EVDNC=ASSMB;HOMSEQ=CTATTATTACCTT;MAPQ=60;MATEID=442750:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_8_15141001_15166001_10C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:20:8.4:92.4,8.4,0:31:0:-92.42:92.42
8	15144078	442750:2	C	]8:15143770]C	92	PASS	EVDNC=ASSMB;HOMSEQ=CTATTATTACCTT;MAPQ=60;MATEID=442750:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_8_15141001_15166001_10C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:20:8.4:92.4,8.4,0:31:0:-92.42:92.42
8	15965406	443106:1	G	G[8:15979503[	46	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=443106:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_15974001_15999001_23C;SPAN=14097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21
8	15979503	443106:2	A	]8:15965406]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=443106:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_15974001_15999001_23C;SPAN=14097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21
8	16176924	443194:1	G	]8:16188715]G	23	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=443194:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:16176924(-)-8:16188715(+)__8_16170001_16195001D;SPAN=11791;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:35:23.3:23.3,0,62.9:0:10:-23.17:24.27
8	16188715	443194:2	C	C[8:16176924[	23	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=443194:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:16176924(-)-8:16188715(+)__8_16170001_16195001D;SPAN=11791;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:35:23.3:23.3,0,62.9:0:10:-23.17:24.27
8	16297189	443263:1	T	]8:16297276]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TTACATTTAAATGT;MAPQ=56;MATEID=443263:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16292501_16317501_11C;SPAN=87;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:42:41:41,0,64.1:16:0:-41.01:41.3
8	16297276	443263:2	T	T[8:16297189[	41	PASS	EVDNC=ASSMB;HOMSEQ=TTACATTTAAATGT;MAPQ=60;MATEID=443263:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16292501_16317501_11C;SPAN=87;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:42:41:41,0,64.1:16:0:-41.01:41.3
8	16964371	443510:1	G	G[8:16964741[	59	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=443510:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16954001_16979001_86C;SPAN=370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
8	16964741	443510:2	G	]8:16964371]G	59	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=443510:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16954001_16979001_86C;SPAN=370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
8	17104713	443545:1	C	C[8:17105020[	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTCCAGATATC;MAPQ=60;MATEID=443545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17101001_17126001_12C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
8	17105020	443545:2	A	]8:17104713]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTCCAGATATC;MAPQ=60;MATEID=443545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17101001_17126001_12C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
8	17408106	443658:1	A	A[8:17408417[	66	PASS	EVDNC=ASSMB;HOMSEQ=AAGAACATCATGGA;MAPQ=60;MATEID=443658:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17395001_17420001_29C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:17:6:66,6,0:22:0:-66.02:66.02
8	17408417	443658:2	A	]8:17408106]A	66	PASS	EVDNC=ASSMB;HOMSEQ=AAGAACATCATGGA;MAPQ=60;MATEID=443658:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17395001_17420001_29C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:17:6:66,6,0:22:0:-66.02:66.02
8	18594144	444074:1	T	T[8:18594341[	9	PASS	EVDNC=ASSMB;HOMSEQ=ATATATATT;MAPQ=60;MATEID=444074:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_18571001_18596001_54C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:4:1:0.9:9.9,0.9,0:4:0:-9.903:9.903
8	18594341	444074:2	A	]8:18594144]A	9	PASS	EVDNC=ASSMB;HOMSEQ=ATATATATT;MAPQ=60;MATEID=444074:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_18571001_18596001_54C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:4:1:0.9:9.9,0.9,0:4:0:-9.903:9.903
8	18597110	444086:1	C	C[8:18598435[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGGATC;MAPQ=60;MATEID=444086:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_8_18595501_18620501_89C;SPAN=1325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:26:9.9:108.9,9.9,0:36:0:-108.9:108.9
8	18598435	444086:2	A	]8:18597110]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGGATC;MAPQ=60;MATEID=444086:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_8_18595501_18620501_89C;SPAN=1325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:26:9.9:108.9,9.9,0:36:0:-108.9:108.9
8	18793948	444132:1	C	C[8:18794916[	62	PASS	EVDNC=ASSMB;HOMSEQ=ATGAAGC;MAPQ=60;MATEID=444132:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_8_18791501_18816501_13C;SPAN=968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72
8	18794916	444132:2	A	]8:18793948]A	62	PASS	EVDNC=ASSMB;HOMSEQ=ATGAAGC;MAPQ=60;MATEID=444132:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_8_18791501_18816501_13C;SPAN=968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72
8	19865725	444480:1	A	]8:19865798]A	15	PASS	EVDNC=ASSMB;HOMSEQ=AGGAAGGAAAGAAA;MAPQ=60;MATEID=444480:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_19845001_19870001_47C;SPAN=73;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
8	19865798	444480:2	A	A[8:19865725[	15	PASS	EVDNC=ASSMB;HOMSEQ=AGGAAGGAAAGAAA;MAPQ=60;MATEID=444480:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_19845001_19870001_47C;SPAN=73;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19
8	21085893	444758:1	C	C[8:21086296[	62	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=444758:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21070001_21095001_2C;SPAN=403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:20:5.7:62.7,5.7,0:21:0:-62.72:62.72
8	21086296	444758:2	C	]8:21085893]C	62	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=444758:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21070001_21095001_2C;SPAN=403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:20:5.7:62.7,5.7,0:21:0:-62.72:62.72
8	21517297	444821:1	C	[Un_JTFH01000350v1_decoy:1[C	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=444821:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21511001_21536001_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:18:6:66,6,0:22:0:-66.02:66.02
8	21517297	997407:1	C	[Un_JTFH01000350v1_decoy:1[C	69	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=997407:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_1193_1_1954_0C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:7:6.3:69.3,6.3,0:23:0:-69.32:69.32
8	21766795	1010911:1	A	]Un_JTFH01001939v1_decoy:2292]A	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=1010911:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2782_1_2292_4C;SPAN=-1;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:4:3.3:36.3,3.3,0:12:0:-36.31:36.31
8	21766797	1010912:1	A	A[Un_JTFH01001939v1_decoy:1[	62	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=1010912:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2782_1_2292_7C;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:6:5.7:62.7,5.7,0:21:0:-62.72:62.72
8	21766797	444889:1	A	A[Un_JTFH01001939v1_decoy:1[	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=444889:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_21756001_21781001_45C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:11:6:66,6,0:22:0:-66.02:66.02
8	22332116	445121:1	C	]8:22500234]C	38	PASS	DISC_MAPQ=53;EVDNC=ASDIS;MAPQ=60;MATEID=445121:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_22491001_22516001_10C;SPAN=168118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69
8	22500234	445121:2	T	T[8:22332116[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=445121:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_22491001_22516001_10C;SPAN=168118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69
8	25114919	445971:1	C	C[8:25133429[	72	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=445971:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25112501_25137501_73C;SPAN=18510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
8	25133429	445971:2	A	]8:25114919]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=445971:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25112501_25137501_73C;SPAN=18510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
8	25209169	446016:1	G	G[8:25213137[	36	PASS	EVDNC=ASSMB;HOMSEQ=GGCTCAG;MAPQ=60;MATEID=446016:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25210501_25235501_34C;SPAN=3968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:12:0:-36.31:36.31
8	25213137	446016:2	G	]8:25209169]G	36	PASS	EVDNC=ASSMB;HOMSEQ=GGCTCAG;MAPQ=60;MATEID=446016:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25210501_25235501_34C;SPAN=3968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:12:0:-36.31:36.31
8	25340917	446063:1	T	T[8:25341712[	18	PASS	EVDNC=ASSMB;HOMSEQ=AATT;MAPQ=60;MATEID=446063:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25333001_25358001_15C;SPAN=795;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27
8	25341712	446063:2	A	]8:25340917]A	18	PASS	EVDNC=ASSMB;HOMSEQ=AATT;MAPQ=60;MATEID=446063:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25333001_25358001_15C;SPAN=795;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27
8	28576446	817809:1	G	G[17:81799230[	36	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=817809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28576446(+)-17:81799230(-)__17_81781001_81806001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:2:3.3:36.3,3.3,0:0:12:-36.31:36.31
8	28650137	447158:1	A	]8:28712090]A	39	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=447158:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28650137(-)-8:28712090(+)__8_28689501_28714501D;SPAN=61953;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
8	28712090	447158:2	G	G[8:28650137[	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=447158:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28650137(-)-8:28712090(+)__8_28689501_28714501D;SPAN=61953;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
8	29980022	447488:1	A	A[8:29980770[	32	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=447488:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_29963501_29988501_45C;SPAN=748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
8	29980770	447488:2	A	]8:29980022]A	32	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=447488:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_29963501_29988501_45C;SPAN=748;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
8	32822491	448497:1	G	G[8:32833744[	59	PASS	EVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=448497:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_8_32805501_32830501_21C;SPAN=11253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41
8	32833744	448497:2	C	]8:32822491]C	59	PASS	EVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=448497:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_8_32805501_32830501_21C;SPAN=11253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41
8	35555406	449149:1	A	A[12:52358976[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=449149:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:35555406(+)-12:52358976(-)__8_35549501_35574501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
8	35961094	449181:1	T	]8:35972220]T	29	PASS	DISC_MAPQ=51;EVDNC=ASDIS;INSERTION=ATGATTC;MAPQ=60;MATEID=449181:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_35966001_35991001_0C;SPAN=11126;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:4:7:-29.71:29.71
8	35972220	449181:2	A	A[8:35961094[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATGATTC;MAPQ=60;MATEID=449181:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_35966001_35991001_0C;SPAN=11126;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:4:7:-29.71:29.71
8	37645401	449440:1	G	]Un_JTFH01000913v1_decoy:1045]G	56	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=449440:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_37632001_37657001_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11
8	39096102	449794:1	A	A[8:39096363[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=449794:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_39077501_39102501_30C;SPAN=261;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:10:4:-42.91:42.91
8	39096363	449794:2	T	]8:39096102]T	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=449794:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_39077501_39102501_30C;SPAN=261;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:10:4:-42.91:42.91
8	39907811	450065:1	A	A[8:39908128[	27	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATAATATTTAA;MAPQ=60;MATEID=450065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_39886001_39911001_16C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
8	39908128	450065:2	A	]8:39907811]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATAATATTTAA;MAPQ=60;MATEID=450065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_39886001_39911001_16C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
8	40279424	450329:1	T	]8:40531710]T	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=450329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_40523001_40548001_104C;SPAN=252286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:8:8:-36.31:36.31
8	40432188	450269:1	A	A[8:40438679[	46	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAATACACAGGA;MAPQ=60;MATEID=450269:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_8_40425001_40450001_119C;SPAN=6491;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21
8	40438679	450269:2	A	]8:40432188]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAATACACAGGA;MAPQ=60;MATEID=450269:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_8_40425001_40450001_119C;SPAN=6491;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21
8	40531710	450329:2	G	G[8:40279424[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=450329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_40523001_40548001_104C;SPAN=252286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:8:8:-36.31:36.31
8	42332967	450872:1	C	C[8:42336835[	66	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCATTGCACTCC;MAPQ=60;MATEID=450872:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_8_42336001_42361001_31C;SPAN=3868;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:1:6:66,6,0:9:14:-66.02:66.02
8	42336835	450872:2	C	]8:42332967]C	66	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCATTGCACTCC;MAPQ=60;MATEID=450872:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_8_42336001_42361001_31C;SPAN=3868;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:1:6:66,6,0:9:14:-66.02:66.02
8	43588080	734367:1	C	[15:62731836[C	49	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=734367:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62720001_62745001_57C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:11:8:-50.34:50.34
8	43776203	451387:1	T	]8:43780756]T	44	PASS	EVDNC=ASSMB;HOMSEQ=TTCTTTGGATTCAGCAGATTGGAAACACTCTTT;MAPQ=60;MATEID=451387:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_43757001_43782001_13C;SPAN=4553;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85
8	43780756	451387:2	T	T[8:43776203[	44	PASS	EVDNC=ASSMB;HOMSEQ=TTCTTTGGATTCAGCAGATTGGAAACACTCTTT;MAPQ=60;MATEID=451387:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_43757001_43782001_13C;SPAN=4553;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85
8	46080001	451746:1	T	T[8:46080812[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTTTTGATTCAACAGGTTGGAAACACTTTTTTTGTAGAAT;MAPQ=60;MATEID=451746:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46060001_46085001_11C;SPAN=811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:8:6:-38:38
8	46080812	451746:2	T	]8:46080001]T	36	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TTCTTTTGATTCAACAGGTTGGAAACACTTTTTTTGTAGAAT;MAPQ=60;MATEID=451746:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46060001_46085001_11C;SPAN=811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:8:6:-38:38
8	46469698	451798:1	T	T[8:46470019[	55	PASS	EVDNC=ASSMB;HOMSEQ=CTTTCTAGCTTTT;MAPQ=60;MATEID=451798:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46452001_46477001_68C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:25:6.2:55.7,0,6.2:19:0:-57.84:57.84
8	46470019	451798:2	C	]8:46469698]C	55	PASS	EVDNC=ASSMB;HOMSEQ=CTTTCTAGCTTTT;MAPQ=60;MATEID=451798:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46452001_46477001_68C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:25:6.2:55.7,0,6.2:19:0:-57.84:57.84
8	46494290	451803:1	A	A[8:46496276[	29	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=451803:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:46494290(+)-8:46496276(-)__8_46476501_46501501D;SPAN=1986;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71
8	46496276	451803:2	A	]8:46494290]A	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=451803:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:46494290(+)-8:46496276(-)__8_46476501_46501501D;SPAN=1986;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71
8	48174013	999226:1	T	T[Un_JTFH01000836v1_decoy:1[	49	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=999226:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1679_1_1109_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51
8	48174013	452062:1	T	T[Un_JTFH01000836v1_decoy:1[	55	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=452062:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_48167001_48192001_57C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:27:12.2:55.1,0,12.2:19:0:-56.6:56.6
8	48180826	452065:1	G	G[8:48181419[	28	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=452065:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_48167001_48192001_123C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
8	48181419	452065:2	G	]8:48180826]G	28	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=452065:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_48167001_48192001_123C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
8	49713404	987218:1	T	T[Un_KN707628v1_decoy:1[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=987218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_479_1_2960_3C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:4:4.2:46.2,4.2,0:15:0:-46.21:46.21
8	50118594	452481:1	C	C[8:50125769[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452481:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:50118594(+)-8:50125769(-)__8_50102501_50127501D;SPAN=7175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:2:4.2:46.2,4.2,0:0:16:-46.21:46.21
8	50125769	452481:2	T	]8:50118594]T	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452481:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:50118594(+)-8:50125769(-)__8_50102501_50127501D;SPAN=7175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:2:4.2:46.2,4.2,0:0:16:-46.21:46.21
8	50839986	452617:1	A	A[8:50840180[	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=452617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_50837501_50862501_21C;SPAN=194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19
8	50840180	452617:2	A	]8:50839986]A	19	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=452617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_50837501_50862501_21C;SPAN=194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19
8	51817582	452806:1	C	]11:38791187]C	49	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=452806:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51817582(-)-11:38791187(+)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:13:4.5:49.5,4.5,0:0:17:-49.51:49.51
8	51819021	452809:1	A	A[11:38791106[	82	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=452809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51819021(+)-11:38791106(-)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52
8	59222847	454429:1	T	]8:59224226]T	49	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=454429:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:59222847(-)-8:59224226(+)__8_59216501_59241501D;SPAN=1379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
8	59224226	454429:2	A	A[8:59222847[	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=454429:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:59222847(-)-8:59224226(+)__8_59216501_59241501D;SPAN=1379;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
8	62017592	454978:1	T	T[8:62017897[	36	PASS	EVDNC=ASSMB;HOMSEQ=ATATTCTT;MAPQ=60;MATEID=454978:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_8_62009501_62034501_28C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31
8	62017897	454978:2	A	]8:62017592]A	36	PASS	EVDNC=ASSMB;HOMSEQ=ATATTCTT;MAPQ=60;MATEID=454978:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_8_62009501_62034501_28C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31
8	62346646	455114:1	G	G[8:62350676[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAG;MAPQ=60;MATEID=455114:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_62328001_62353001_14C;SPAN=4030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:9:9:-42.91:42.91
8	62350676	455114:2	T	]8:62346646]T	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAG;MAPQ=60;MATEID=455114:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_62328001_62353001_14C;SPAN=4030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:9:9:-42.91:42.91
8	63059041	504759:1	T	]9:90432262]T	25	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TTTTTTTTTGAGACGG;INSERTION=TTTTTTGTTGTTGTTG;MAPQ=60;MATEID=504759:2;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_9_90429501_90454501_9C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46
8	67227171	456003:1	C	]8:67247201]C	47	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=456003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_67228001_67253001_3C;SPAN=20030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
8	67247201	456003:2	T	T[8:67227171[	47	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=456003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_67228001_67253001_3C;SPAN=20030;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
8	70380126	456829:1	A	]8:70404842]A	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=456829:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_70388501_70413501_9C;SPAN=24716;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:10:7:-39.28:39.28
8	70404842	456829:2	A	A[8:70380126[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=456829:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_70388501_70413501_9C;SPAN=24716;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:10:7:-39.28:39.28
8	70671447	456910:1	A	A[8:70672408[	92	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=456910:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:70671447(+)-8:70672408(-)__8_70658001_70683001D;SPAN=961;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:16:8.4:92.4,8.4,0:0:31:-92.42:92.42
8	70672408	456910:2	T	]8:70671447]T	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=456910:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:70671447(+)-8:70672408(-)__8_70658001_70683001D;SPAN=961;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:16:8.4:92.4,8.4,0:0:31:-92.42:92.42
8	71639183	457174:1	C	C[8:71639505[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTTTCACTATATC;MAPQ=60;MATEID=457174:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_71638001_71663001_110C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:5:5:-26.83:26.83
8	71639505	457174:2	G	]8:71639183]G	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTTTCACTATATC;MAPQ=60;MATEID=457174:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_71638001_71663001_110C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:22:26.9:26.9,0,26.9:5:5:-26.83:26.83
8	72488218	457496:1	A	]8:72492038]A	31	PASS	EVDNC=ASSMB;INSERTION=AGG;MAPQ=60;MATEID=457496:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72471001_72496001_0C;SPAN=3820;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
8	72492038	457496:2	T	T[8:72488218[	31	PASS	EVDNC=ASSMB;INSERTION=AGG;MAPQ=60;MATEID=457496:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72471001_72496001_0C;SPAN=3820;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
8	72874467	164465:2	A	A]3:62586884]	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=164465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62573001_62598001_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:89:5.1:0,5.1,234.3:4:3:5.211:10.46
8	72875540	457568:1	T	T[8:72881589[	15	PASS	EVDNC=ASSMB;HOMSEQ=TGCAAATCTT;MAPQ=60;MATEID=457568:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72863001_72888001_19C;SPAN=6049;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78
8	72881589	457568:2	T	]8:72875540]T	15	PASS	EVDNC=ASSMB;HOMSEQ=TGCAAATCTT;MAPQ=60;MATEID=457568:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72863001_72888001_19C;SPAN=6049;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78
8	74964713	458158:1	T	T[8:74965030[	40	PASS	EVDNC=ASSMB;HOMSEQ=TCTGTTTCTT;MAPQ=60;MATEID=458158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_74945501_74970501_88C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
8	74965030	458158:2	T	]8:74964713]T	40	PASS	EVDNC=ASSMB;HOMSEQ=TCTGTTTCTT;MAPQ=60;MATEID=458158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_74945501_74970501_88C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
8	78551616	469227:1	A	[8:109495685[A	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=469227:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_42C;SPAN=30944069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:38:35.6:58.7,0,35.6:14:12:-58.9:58.9
8	78595007	459008:2	T	T[4:124019638[	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=459008:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_78571501_78596501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:12:8:-48.04:48.04
8	84953160	460774:1	T	T]8:84961920]	24	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=460774:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:84953160(+)-8:84961920(+)__8_84941501_84966501D;SPAN=8760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74
8	84961920	460774:2	G	G]8:84953160]	24	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=460774:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:84953160(+)-8:84961920(+)__8_84941501_84966501D;SPAN=8760;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74
8	85317928	460828:1	C	[8:85379024[C	72	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=460828:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_85358001_85383001_30C;SPAN=61096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:17:12:-72.62:72.62
8	85318987	460830:1	T	T[8:85377715[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=460830:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:85318987(+)-8:85377715(-)__8_85358001_85383001D;SPAN=58728;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
8	85377715	460830:2	A	]8:85318987]A	26	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=460830:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:85318987(+)-8:85377715(-)__8_85358001_85383001D;SPAN=58728;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
8	85379024	460828:2	T	[8:85317928[T	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=460828:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_85358001_85383001_30C;SPAN=61096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:17:12:-72.62:72.62
8	86399769	461134:2	T	T[7:94467518[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=461134:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_86387001_86412001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:11:11:-37.05:37.05
8	88379989	461722:1	T	T[8:88380286[	85	PASS	EVDNC=ASSMB;HOMSEQ=CAATTTTTTTT;MAPQ=60;MATEID=461722:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_88371501_88396501_9C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
8	88380286	461722:2	C	]8:88379989]C	85	PASS	EVDNC=ASSMB;HOMSEQ=CAATTTTTTTT;MAPQ=60;MATEID=461722:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_88371501_88396501_9C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82
8	88660960	461783:1	A	]8:88762721]A	28	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=461783:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_88739001_88764001_10C;SPAN=101761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
8	88762721	461783:2	A	A[8:88660960[	28	PASS	EVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=461783:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_88739001_88764001_10C;SPAN=101761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
8	90572079	480933:1	T	T]8:140089087]	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=480933:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_140066501_140091501_99C;SPAN=49517008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:10:5:-43.34:43.34
8	90572448	462287:1	C	C]17:57501774]	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=462287:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_90552001_90577001_44C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:7:7:-29.85:29.85
8	90572493	462288:1	T	T]8:91552326]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=462288:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:90572493(+)-8:91552326(+)__8_90552001_90577001D;SPAN=979833;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
8	91551154	462485:2	G	]4:155293071]G	24	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=462485:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_91532001_91557001_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
8	91552255	474755:1	A	A[8:124579365[	18	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GA;MAPQ=60;MATEID=474755:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_8_124558001_124583001_91C;SPAN=33027110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:7:5:-18.75:20.87
8	91552326	462288:2	T	T]8:90572493]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=462288:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:90572493(+)-8:91552326(+)__8_90552001_90577001D;SPAN=979833;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
8	91873626	248969:2	C	C]4:113846014]	20	PASS	DISC_MAPQ=11;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=35;MATEID=248969:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_113827001_113852001_31C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:7:4:-20.43:21.63
8	93040697	462926:1	A	]8:93059897]A	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=462926:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93040697(-)-8:93059897(+)__8_93051001_93076001D;SPAN=19200;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
8	93059897	462926:2	A	A[8:93040697[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=462926:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93040697(-)-8:93059897(+)__8_93051001_93076001D;SPAN=19200;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
8	93654319	463125:1	T	T[19:9167128[	62	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=463125:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93654319(+)-19:9167128(-)__8_93639001_93664001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:0:21:-62.72:62.72
8	95863000	463991:1	T	T[8:95867363[	47	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=463991:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_95844001_95869001_11C;SPAN=4363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:17:0:-48.35:48.35
8	95867363	463991:2	C	]8:95863000]C	47	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=463991:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_95844001_95869001_11C;SPAN=4363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:17:0:-48.35:48.35
8	96085860	464075:1	A	A[8:96086198[	55	PASS	EVDNC=ASSMB;HOMSEQ=GAAAGAGAGGTATTA;MAPQ=60;MATEID=464075:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_8_96064501_96089501_8C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:168:55.3:55.3,0,365.6:31:0:-55.11:68.49
8	96086198	464075:2	G	]8:96085860]G	55	PASS	EVDNC=ASSMB;HOMSEQ=GAAAGAGAGGTATTA;MAPQ=60;MATEID=464075:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_8_96064501_96089501_8C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:168:55.3:55.3,0,365.6:31:0:-55.11:68.49
8	96173027	464091:2	C	]4:139694008]C	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=464091:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_54C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06
8	96174456	464088:2	A	A[4:116722508[	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=464088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_12C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:10:11:-45.23:45.23
8	97583181	464420:1	T	T[8:97583504[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATAATAAATTTTT;MAPQ=60;MATEID=464420:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_97583501_97608501_87C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:12:10.5:115.5,10.5,0:38:0:-115.5:115.5
8	97583504	464420:2	A	]8:97583181]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATAATAAATTTTT;MAPQ=60;MATEID=464420:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_97583501_97608501_87C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:12:10.5:115.5,10.5,0:38:0:-115.5:115.5
8	98214711	464688:2	G	G]4:141260902]	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AA;MAPQ=60;MATEID=464688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_98196001_98221001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:9:2:-27.11:27.11
8	98919076	464913:1	C	]8:99035533]C	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=464913:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:98919076(-)-8:99035533(+)__8_99029001_99054001D;SPAN=116457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76
8	99035533	464913:2	A	A[8:98919076[	22	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=464913:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:98919076(-)-8:99035533(+)__8_99029001_99054001D;SPAN=116457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76
8	100064021	882837:1	T	]20:47782526]T	63	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=882837:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47775001_47800001_26C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:116:63.2:63.2,0,228.2:20:27:-63.12:68.41
8	101325742	465752:1	T	]8:101488146]T	18	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=465752:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101307501_101332501_6C;SPAN=162404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87
8	101448776	465866:1	T	]8:101540338]T	52	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=465866:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101528001_101553001_15C;SPAN=91562;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:60:52.4:52.4,0,98.6:21:0:-52.46:53.23
8	101488146	465752:2	T	T[8:101325742[	18	PASS	EVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=465752:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101307501_101332501_6C;SPAN=162404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87
8	101540338	465866:2	A	A[8:101448776[	52	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=465866:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101528001_101553001_15C;SPAN=91562;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:60:52.4:52.4,0,98.6:21:0:-52.46:53.23
8	102423273	466221:1	A	A]8:102423778]	82	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TAGCTGGGATTAC;MAPQ=60;MATEID=466221:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_102410001_102435001_106C;SPAN=505;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:47:33.2:82.7,0,33.2:17:21:-83.52:83.52
8	102423778	466221:2	C	C]8:102423273]	82	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TAGCTGGGATTAC;MAPQ=60;MATEID=466221:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_102410001_102435001_106C;SPAN=505;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:47:33.2:82.7,0,33.2:17:21:-83.52:83.52
8	103749080	466883:1	T	T[8:103749364[	1	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCAT;MAPQ=36;MATEID=466883:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_103733001_103758001_111C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:53:1.7:1.7,0,130.4:5:0:-1.607:9.478
8	103749364	466883:2	G	]8:103749080]G	1	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCAT;MAPQ=60;MATEID=466883:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_103733001_103758001_111C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:53:1.7:1.7,0,130.4:5:0:-1.607:9.478
8	103833107	510495:1	T	T[9:109410883[	32	PASS	EVDNC=ASSMB;INSERTION=GCATTTTTT;MAPQ=60;MATEID=510495:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_109392501_109417501_62C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
8	103863624	427546:2	T	]7:133435161]T	42	PASS	EVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=427546:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_133427001_133452001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91
8	104467414	467167:1	C	]8:104538330]C	12	PASS	EVDNC=ASSMB;HOMSEQ=CCCA;MAPQ=60;MATEID=467167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_104517001_104542001_2C;SPAN=70916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:39:12.2:12.2,0,84.8:7:0:-12.14:15.37
8	104538330	467167:2	A	A[8:104467414[	12	PASS	EVDNC=ASSMB;HOMSEQ=CCCA;MAPQ=60;MATEID=467167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_104517001_104542001_2C;SPAN=70916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:39:12.2:12.2,0,84.8:7:0:-12.14:15.37
8	105955934	467732:1	A	A[8:105956892[	24	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=47;MATEID=467732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_105938001_105963001_27C;SPAN=958;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:66:24.5:24.5,0,140:9:8:-24.36:29.13
8	105956892	467732:2	A	]8:105955934]A	24	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=467732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_105938001_105963001_27C;SPAN=958;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:66:24.5:24.5,0,140:9:8:-24.36:29.13
8	106040326	467745:1	A	A[8:106040600[	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=467745:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106036001_106061001_27C;SPAN=274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:51:5.6:121.1,0,5.6:41:0:-127:127
8	106040600	467745:2	C	]8:106040326]C	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=467745:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106036001_106061001_27C;SPAN=274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:51:5.6:121.1,0,5.6:41:0:-127:127
8	106498881	467953:1	G	G[8:106499191[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATTAGGAGATG;MAPQ=60;MATEID=467953:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106477001_106502001_118C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:34:13.5:148.5,13.5,0:49:0:-148.5:148.5
8	106499191	467953:2	A	]8:106498881]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATTAGGAGATG;MAPQ=60;MATEID=467953:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106477001_106502001_118C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:34:13.5:148.5,13.5,0:49:0:-148.5:148.5
8	107108006	468214:1	G	G[8:107108310[	65	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATGCATGAACATTGG;MAPQ=60;MATEID=468214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107089501_107114501_16C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36
8	107108310	468214:2	A	]8:107108006]A	65	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATGCATGAACATTGG;MAPQ=60;MATEID=468214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107089501_107114501_16C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36
8	107368493	468346:1	T	T[8:107368851[	71	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTT;MAPQ=60;MATEID=468346:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_107359001_107384001_126C;SPAN=358;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:41:31.4:71,0,31.4:15:15:-71.79:71.79
8	107368851	468346:2	T	]8:107368493]T	71	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTT;MAPQ=60;MATEID=468346:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_107359001_107384001_126C;SPAN=358;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:41:31.4:71,0,31.4:15:15:-71.79:71.79
8	107612139	468511:1	A	]8:107622099]A	2	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACA;MAPQ=60;MATEID=468511:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107604001_107629001_103C;SPAN=9960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:96:2.9:2.9,0,237.2:2:9:-2.724:17.03
8	107622099	468511:2	A	A[8:107612139[	2	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACA;MAPQ=60;MATEID=468511:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107604001_107629001_103C;SPAN=9960;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:96:2.9:2.9,0,237.2:2:9:-2.724:17.03
8	107769184	468586:1	G	G[8:107770194[	86	PASS	EVDNC=ASSMB;INSERTION=GAGCATTCAT;MAPQ=60;MATEID=468586:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_107751001_107776001_95C;SPAN=1010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:47:29.9:86,0,29.9:30:0:-87.13:87.13
8	107770194	468586:2	G	]8:107769184]G	86	PASS	EVDNC=ASSMB;INSERTION=GAGCATTCAT;MAPQ=60;MATEID=468586:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_107751001_107776001_95C;SPAN=1010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:47:29.9:86,0,29.9:30:0:-87.13:87.13
8	108717946	468836:1	T	T[8:108718258[	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGACTTAGGTTTT;MAPQ=60;MATEID=468836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_108706501_108731501_74C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:36:9.9:108.9,9.9,0:33:0:-107.6:107.6
8	108718258	468836:2	C	]8:108717946]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGACTTAGGTTTT;MAPQ=60;MATEID=468836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_108706501_108731501_74C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:36:9.9:108.9,9.9,0:33:0:-107.6:107.6
8	108770582	468851:2	A	A[4:111438522[	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=468851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:111438522(-)-8:108770582(+)__8_108755501_108780501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:0:9:-15.65:19.78
8	109065134	469005:1	A	]8:109065246]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=469005:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_8_109049501_109074501_87C;SPAN=112;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:100:99:117.2,0,133.7:44:0:-117.1:117.2
8	109065246	469005:2	A	A[8:109065134[	99	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=469005:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_8_109049501_109074501_87C;SPAN=112;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:100:99:117.2,0,133.7:44:0:-117.1:117.2
8	109222490	469108:1	C	C[8:109222824[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=469108:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_109221001_109246001_68C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:54:34.4:100.4,0,34.4:35:0:-102:102
8	109222824	469108:2	A	]8:109222490]A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=469108:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_109221001_109246001_68C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:54:34.4:100.4,0,34.4:35:0:-102:102
8	109495685	469227:2	A	[8:78551616[A	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=469227:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_42C;SPAN=30944069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:38:35.6:58.7,0,35.6:14:12:-58.9:58.9
8	109498091	469232:1	T	T[8:109498401[	80	PASS	EVDNC=ASSMB;HOMSEQ=CATGTTTTCTTTT;MAPQ=60;MATEID=469232:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_26C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:43:27.5:80.3,0,27.5:28:0:-81.73:81.73
8	109498401	469232:2	C	]8:109498091]C	80	PASS	EVDNC=ASSMB;HOMSEQ=CATGTTTTCTTTT;MAPQ=60;MATEID=469232:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_26C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:43:27.5:80.3,0,27.5:28:0:-81.73:81.73
8	109517001	469240:2	A	A[4:122720683[	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=469240:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109515001_109540001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:53:28.1:28.1,0,104:13:0:-28.02:30.54
8	111281823	469836:1	G	G[8:111284911[	86	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=469836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_111279001_111304001_53C;SPAN=3088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98
8	111284911	469836:2	G	]8:111281823]G	86	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=469836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_111279001_111304001_53C;SPAN=3088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98
8	111355427	473012:1	T	T[8:120549876[	44	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=473012:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_120540001_120565001_41C;SPAN=9194449;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85
8	113044266	470428:1	G	G[8:113046544[	99	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=470428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_113043001_113068001_9C;SPAN=2278;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:35:11.7:128.7,11.7,0:42:0:-128.7:128.7
8	113046544	470428:2	A	]8:113044266]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=470428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_113043001_113068001_9C;SPAN=2278;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:35:11.7:128.7,11.7,0:42:0:-128.7:128.7
8	114067086	470703:1	C	C[8:114068448[	99	PASS	EVDNC=ASSMB;INSERTION=CAG;MAPQ=60;MATEID=470703:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114047501_114072501_183C;SPAN=1362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:32:12:132,12,0:43:0:-132:132
8	114068448	470703:2	A	]8:114067086]A	99	PASS	EVDNC=ASSMB;INSERTION=CAG;MAPQ=60;MATEID=470703:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114047501_114072501_183C;SPAN=1362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:32:12:132,12,0:43:0:-132:132
8	114245422	470781:1	C	C[8:114246294[	22	PASS	DISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=470781:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114243501_114268501_42C;SPAN=872;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:49:22.7:22.7,0,98.6:10:2:-22.54:25.36
8	114246294	470781:2	T	]8:114245422]T	22	PASS	DISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=470781:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114243501_114268501_42C;SPAN=872;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:49:22.7:22.7,0,98.6:10:2:-22.54:25.36
8	115476006	471204:1	T	T[8:115476319[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAAAATATACTTTCT;MAPQ=60;MATEID=471204:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_115468501_115493501_69C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:32.9:32.9,0,56:8:6:-32.79:33.17
8	115476319	471204:2	C	]8:115476006]C	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAAAATATACTTTCT;MAPQ=60;MATEID=471204:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_115468501_115493501_69C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:32.9:32.9,0,56:8:6:-32.79:33.17
8	117667362	471947:2	T	[2:125013432[T	92	PASS	DISC_MAPQ=27;EVDNC=ASDIS;INSERTION=AAATAAAAT;MAPQ=0;MATEID=471947:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_117649001_117674001_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:26:8.4:92.4,8.4,0:27:7:-92.42:92.42
8	117968533	472068:1	A	A[8:117968870[	91	PASS	EVDNC=ASSMB;HOMSEQ=ATTCTGCCTTATTTA;MAPQ=60;MATEID=472068:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_117967501_117992501_107C;SPAN=337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:40:8.6:91.1,0,8.6:31:0:-94.93:94.93
8	117968870	472068:2	A	]8:117968533]A	91	PASS	EVDNC=ASSMB;HOMSEQ=ATTCTGCCTTATTTA;MAPQ=60;MATEID=472068:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_117967501_117992501_107C;SPAN=337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:40:8.6:91.1,0,8.6:31:0:-94.93:94.93
8	120321170	472949:1	G	]8:120378583]G	15	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=472949:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_120368501_120393501_35C;SPAN=57413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78
8	120378583	472949:2	C	C[8:120321170[	15	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=472949:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_120368501_120393501_35C;SPAN=57413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78
8	120549876	473012:2	T	]8:111355427]T	44	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=473012:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_120540001_120565001_41C;SPAN=9194449;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85
8	120669445	473069:1	T	T[8:120669752[	99	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATGCTTGTT;MAPQ=60;MATEID=473069:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_120662501_120687501_107C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114
8	120669752	473069:2	G	]8:120669445]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GAAAATGCTTGTT;MAPQ=60;MATEID=473069:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_120662501_120687501_107C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114
8	122286805	473790:1	T	]8:122286919]T	5	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=473790:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122279501_122304501_48C;SPAN=114;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:75:5.3:5.3,0,183.5:8:0:-5.326:15.61
8	122286919	473790:2	C	C[8:122286805[	5	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=473790:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122279501_122304501_48C;SPAN=114;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:75:5.3:5.3,0,183.5:8:0:-5.326:15.61
8	122356933	473874:1	C	]8:122460639]C	30	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=473874:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122451001_122476001_45C;SPAN=103706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
8	122460639	473874:2	C	C[8:122356933[	30	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=473874:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122451001_122476001_45C;SPAN=103706;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87
8	124301274	474613:1	T	]8:124311894]T	9	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=474613:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_124288501_124313501_19C;SPAN=10620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:61:9.5:9.5,0,141.5:8:0:-9.261:16.38
8	124311894	474613:2	G	G[8:124301274[	9	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=474613:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_124288501_124313501_19C;SPAN=10620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:61:9.5:9.5,0,141.5:8:0:-9.261:16.38
8	124579365	474755:2	G	]8:91552255]G	18	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GA;MAPQ=60;MATEID=474755:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_8_124558001_124583001_91C;SPAN=33027110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:7:5:-18.75:20.87
8	125582885	475223:1	A	A[8:125588891[	99	PASS	EVDNC=ASSMB;HOMSEQ=CACTCACA;MAPQ=60;MATEID=475223:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_8_125587001_125612001_12C;SPAN=6006;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:31:12.9:141.9,12.9,0:47:0:-141.9:141.9
8	125588891	475223:2	C	]8:125582885]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CACTCACA;MAPQ=60;MATEID=475223:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_8_125587001_125612001_12C;SPAN=6006;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:31:12.9:141.9,12.9,0:47:0:-141.9:141.9
8	125669145	475249:1	T	T[8:125669463[	80	PASS	EVDNC=ASSMB;HOMSEQ=TCATGTTAATTTTT;MAPQ=60;MATEID=475249:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_8_125660501_125685501_80C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
8	125669463	475249:2	T	]8:125669145]T	80	PASS	EVDNC=ASSMB;HOMSEQ=TCATGTTAATTTTT;MAPQ=60;MATEID=475249:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_8_125660501_125685501_80C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
8	126114017	475363:2	C	]4:127522207]C	20	PASS	EVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=475363:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126101501_126126501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
8	126179961	475380:1	C	C[8:126182328[	70	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=475380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126175001_126200001_66C;SPAN=2367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:54:64.1:70.7,0,64.1:26:0:-70.66:70.66
8	126182328	475380:2	A	]8:126179961]A	70	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=475380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126175001_126200001_66C;SPAN=2367;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:54:64.1:70.7,0,64.1:26:0:-70.66:70.66
8	126236711	475428:1	T	T[8:126237039[	67	PASS	EVDNC=ASSMB;INSERTION=AAAACATT;MAPQ=60;MATEID=475428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126224001_126249001_170C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07
8	126237039	475428:2	C	]8:126236711]C	67	PASS	EVDNC=ASSMB;INSERTION=AAAACATT;MAPQ=60;MATEID=475428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126224001_126249001_170C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07
8	126797640	477799:1	T	T]8:131831800]	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCT;MAPQ=60;MATEID=477799:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131810001_131835001_1C;SPAN=5034160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:20:8:-81.69:81.69
8	127117370	475747:1	T	[8:127118469[T	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=475747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127106001_127131001_15C;SPAN=1099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:72:26:26,0,154.7:10:6:-25.98:31.28
8	127118469	475747:2	C	[8:127117370[C	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=475747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127106001_127131001_15C;SPAN=1099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:72:26:26,0,154.7:10:6:-25.98:31.28
8	127521585	475914:2	A	[3:111555239[A	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=AAAAAAATAAAAAA;MAPQ=60;MATEID=475914:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_8_127498001_127523001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:87:45:24.3:267.3,24.3,0:46:56:-267.4:267.4
8	127521605	475916:2	A	A[7:65340142[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=475916:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127498001_127523001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:56:37.1:103.1,0,37.1:34:6:-104.7:104.7
8	128092140	476301:1	A	]8:128260292]A	65	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=476301:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128257501_128282501_49C;SPAN=168152;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18
8	128260292	476301:2	A	A[8:128092140[	65	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=476301:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128257501_128282501_49C;SPAN=168152;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18
8	128452922	476384:1	T	T[8:128459021[	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAGCTTGTGTTTTT;MAPQ=60;MATEID=476384:2;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_8_128453501_128478501_6C;SPAN=6099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:23:18.3:201.3,18.3,0:66:0:-201.3:201.3
8	128459021	476384:2	C	]8:128452922]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAGCTTGTGTTTTT;MAPQ=60;MATEID=476384:1;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_8_128453501_128478501_6C;SPAN=6099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:23:18.3:201.3,18.3,0:66:0:-201.3:201.3
8	128891244	476530:1	A	A[8:131821933[	54	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=476530:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128870001_128895001_45C;SPAN=2930689;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:19:0:-55.55:55.55
8	129429457	480935:1	T	T[8:140088893[	20	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=480935:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_37C;SPAN=10659436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
8	129429474	476707:2	A	[4:126064282[A	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=476707:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_74C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:13:3:-39.96:39.98
8	129429764	476702:2	A	A[4:105671656[	57	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=476702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_125C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:30:17.9:57.5,0,17.9:13:9:-58.74:58.74
8	129727754	476951:1	G	]8:129865311]G	14	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=476951:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129850001_129875001_17C;SPAN=137557;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27
8	129865311	476951:2	G	G[8:129727754[	14	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=476951:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129850001_129875001_17C;SPAN=137557;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27
8	130535526	477262:2	C	[4:182335217[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=477262:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_130511501_130536501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:25:10.5:115.5,10.5,0:27:19:-115.5:115.5
8	130722580	477337:1	T	T[8:141644937[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT;MAPQ=60;MATEID=477337:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_130707501_130732501_91C;SPAN=10922357;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:5:-29.21:29.92
8	130897690	477423:1	T	[8:130898322[T	34	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=477423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:130897690(-)-8:130898322(-)__8_130879001_130904001D;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:79:34.1:34.1,0,162.8:0:17:-33.91:38.83
8	130898322	477423:2	G	[8:130897690[G	34	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=477423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:130897690(-)-8:130898322(-)__8_130879001_130904001D;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:79:34.1:34.1,0,162.8:0:17:-33.91:38.83
8	131152906	477489:2	G	G[4:139733131[	31	PASS	EVDNC=ASSMB;INSERTION=ATCTGCATTTTT;MAPQ=60;MATEID=477489:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131148501_131173501_29C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
8	131821933	476530:2	G	]8:128891244]G	54	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=476530:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128870001_128895001_45C;SPAN=2930689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:29:18.2:54.5,0,18.2:19:0:-55.55:55.55
8	131831800	477799:2	A	A]8:126797640]	79	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTCT;MAPQ=60;MATEID=477799:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131810001_131835001_1C;SPAN=5034160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:20:8:-81.69:81.69
8	133317217	478309:1	T	T[8:133317524[	99	PASS	EVDNC=ASSMB;HOMSEQ=CATAATAACTATTTTT;MAPQ=60;MATEID=478309:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_133304501_133329501_17C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3
8	133317524	478309:2	C	]8:133317217]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CATAATAACTATTTTT;MAPQ=60;MATEID=478309:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_133304501_133329501_17C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3
8	134070686	478579:1	T	T[8:134076773[	10	PASS	EVDNC=ASSMB;HOMSEQ=CATTCTTCAACATTTT;MAPQ=60;MATEID=478579:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_134064001_134089001_56C;SPAN=6087;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:58:10.1:10.1,0,135.5:8:0:-10.1:16.57
8	134076773	478579:2	C	]8:134070686]C	10	PASS	EVDNC=ASSMB;HOMSEQ=CATTCTTCAACATTTT;MAPQ=60;MATEID=478579:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_134064001_134089001_56C;SPAN=6087;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:58:10.1:10.1,0,135.5:8:0:-10.1:16.57
8	135895484	479171:1	A	]8:135918805]A	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=479171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_135901501_135926501_131C;SPAN=23321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:8:10:-40.18:40.18
8	135918805	479171:2	G	G[8:135895484[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=479171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_135901501_135926501_131C;SPAN=23321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:8:10:-40.18:40.18
8	136147954	479271:1	C	C[8:136151656[	99	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=479271:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136146501_136171501_74C;SPAN=3702;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
8	136151656	479271:2	G	]8:136147954]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=479271:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136146501_136171501_74C;SPAN=3702;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
8	136645913	479453:2	A	[4:142696529[A	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=479453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:10:2:-26.26:26.32
8	136646252	479457:2	G	]4:145607890]G	16	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=479457:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:145607890(+)-8:136646252(-)__8_136636501_136661501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:36:16.4:16.4,0,72.5:0:8:-16.29:18.4
8	136646564	479452:2	C	C[4:141260745[	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=479452:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_40C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:8:5:-24.86:25.27
8	138020879	886287:1	G	]20:55858690]G	22	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=886287:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_55835501_55860501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:6:8:-22.05:23.72
8	138632595	480393:2	G	[4:133589596[G	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=480393:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_138621001_138646001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:6:3:-17.41:18.87
8	139084311	671986:1	A	A[13:61171765[	29	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=671986:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_61152001_61177001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
8	139960606	480879:1	C	C[8:139962907[	33	PASS	EVDNC=ASSMB;INSERTION=AGT;MAPQ=60;MATEID=480879:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_139944001_139969001_95C;SPAN=2301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8
8	139962907	480879:2	A	]8:139960606]A	33	PASS	EVDNC=ASSMB;INSERTION=AGT;MAPQ=60;MATEID=480879:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_139944001_139969001_95C;SPAN=2301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8
8	140088893	480935:2	T	]8:129429457]T	20	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=480935:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_37C;SPAN=10659436;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
8	140089087	480933:2	A	A]8:90572079]	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=480933:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_99C;SPAN=49517008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:10:5:-43.34:43.34
8	141227424	481280:1	T	T[8:141229502[	14	PASS	EVDNC=ASSMB;HOMSEQ=AGCT;MAPQ=60;MATEID=481280:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_141218001_141243001_16C;SPAN=2078;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:7:0:-13.83:15.94
8	141229502	481280:2	A	]8:141227424]A	14	PASS	EVDNC=ASSMB;HOMSEQ=AGCT;MAPQ=60;MATEID=481280:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_141218001_141243001_16C;SPAN=2078;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:7:0:-13.83:15.94
8	141347578	481342:1	T	]8:141348077]T	23	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=481342:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:141347578(-)-8:141348077(+)__8_141340501_141365501D;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
8	141348077	481342:2	A	A[8:141347578[	23	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=481342:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:141347578(-)-8:141348077(+)__8_141340501_141365501D;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
8	141644937	477337:2	T	]8:130722580]T	29	PASS	DISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT;MAPQ=37;MATEID=477337:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_130707501_130732501_91C;SPAN=10922357;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:5:-29.21:29.92
8	142222638	481809:1	A	]8:142223127]A	13	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=481809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142222638(-)-8:142223127(+)__8_142222501_142247501D;SPAN=489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:48:13.1:13.1,0,105.5:0:8:-12.92:17.28
8	142223127	481809:2	C	C[8:142222638[	13	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=481809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142222638(-)-8:142223127(+)__8_142222501_142247501D;SPAN=489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:48:13.1:13.1,0,105.5:0:8:-12.92:17.28
8	142413422	481912:1	C	C[8:142414319[	99	PASS	EVDNC=ASSMB;HOMSEQ=CACAC;MAPQ=60;MATEID=481912:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_8_142394001_142419001_27C;SPAN=897;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6
8	142414319	481912:2	C	]8:142413422]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CACAC;MAPQ=60;MATEID=481912:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_8_142394001_142419001_27C;SPAN=897;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6
8	142832825	482096:1	C	[8:142838254[C	20	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=482096:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142832825(-)-8:142838254(-)__8_142810501_142835501D;SPAN=5429;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
8	142838254	482096:2	G	[8:142832825[G	20	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=482096:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142832825(-)-8:142838254(-)__8_142810501_142835501D;SPAN=5429;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
8	142877785	482139:1	G	G[8:142915758[	42	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=482139:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142877785(+)-8:142915758(-)__8_142908501_142933501D;SPAN=37973;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91
8	142915758	482139:2	G	]8:142877785]G	42	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=482139:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142877785(+)-8:142915758(-)__8_142908501_142933501D;SPAN=37973;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91
8	143093112	482353:1	C	]8:143204625]C	60	PASS	EVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=482353:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_143202501_143227501_66C;SPAN=111513;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
8	143204625	482353:2	T	T[8:143093112[	60	PASS	EVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=482353:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_143202501_143227501_66C;SPAN=111513;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47
8	143551897	482512:1	T	T[8:143554070[	82	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=482512:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_143545501_143570501_56C;SPAN=2173;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52
8	143554070	482512:2	T	]8:143551897]T	82	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=482512:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_143545501_143570501_56C;SPAN=2173;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52
8	143618862	482537:2	T	[3:186858374[T	52	PASS	DISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=6;MATEID=482537:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143619001_143644001_92C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:1:4.8:52.8,4.8,0:13:9:-52.81:52.81
8	143746946	482663:1	C	]8:143895039]C	25	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=482663:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143888501_143913501_10C;SPAN=148093;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
8	143895039	482663:2	C	C[8:143746946[	25	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=482663:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143888501_143913501_10C;SPAN=148093;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74
8	144020506	482722:1	T	]8:144021175]T	32	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=482722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:144020506(-)-8:144021175(+)__8_144011001_144036001D;SPAN=669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:32.9:32.9,0,56:0:13:-32.79:33.17
8	144021175	482722:2	T	T[8:144020506[	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=482722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:144020506(-)-8:144021175(+)__8_144011001_144036001D;SPAN=669;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:36:32.9:32.9,0,56:0:13:-32.79:33.17
8	144619941	482943:1	T	]8:144620589]T	68	PASS	EVDNC=ASSMB;HOMSEQ=TGAGAGCATGTGTGCC;MAPQ=60;MATEID=482943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_144599001_144624001_44C;SPAN=648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:63:68.3:68.3,0,88.1:26:0:-68.12:68.29
8	144620589	482943:2	C	C[8:144619941[	68	PASS	EVDNC=ASSMB;HOMSEQ=TGAGAGCATGTGTGCC;MAPQ=60;MATEID=482943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_144599001_144624001_44C;SPAN=648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:63:68.3:68.3,0,88.1:26:0:-68.12:68.29
8	145021387	483041:1	T	]8:145028047]T	99	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=483041:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:145021387(-)-8:145028047(+)__8_145015501_145040501D;SPAN=6660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:63:32:124.4,0,32:0:43:-127.1:127.1
8	145028047	483041:2	G	G[8:145021387[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=483041:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:145021387(-)-8:145028047(+)__8_145015501_145040501D;SPAN=6660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:63:32:124.4,0,32:0:43:-127.1:127.1
9	320206	483191:1	A	A[9:322353[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCAAAACCTGACCGAACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCA;MAPQ=60;MATEID=483191:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_318501_343501_0C;SPAN=2147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:4:8.4:92.4,8.4,0:9:22:-92.42:92.42
9	322353	483191:2	A	]9:320206]A	92	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=AACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCAAAACCTGACCGAACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCA;MAPQ=60;MATEID=483191:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_318501_343501_0C;SPAN=2147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:4:8.4:92.4,8.4,0:9:22:-92.42:92.42
9	584229	483259:2	A	]4:97127269]A	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=483259:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:6:5:-30.15:30.15
9	584347	483264:1	G	G[9:1096692[	24	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=483264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_8C;SPAN=512345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
9	793721	483347:1	G	G[9:794383[	39	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCCTTTCTGCTTAAACTGGCTTGAGTGAATTCTGTTGTCTGCAACTAAAAACACTAATCCACATAAGATCCTTGGTTTTATTTACTGATGCTCTAGTCACTTGCCATTTTCTACTGAATTCTCCTTTTCTCCTCATTAGGATCCCTATGTCAATGCTCTGTCCCTGCCTCTAG;MAPQ=60;MATEID=483347:2;MATENM=4;NM=6;NUMPARTS=2;SCTG=c_9_784001_809001_19C;SPAN=662;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:0:3.6:39.6,3.6,0:0:13:-39.61:39.61
9	794383	483347:2	C	]9:793721]C	39	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCCTTTCTGCTTAAACTGGCTTGAGTGAATTCTGTTGTCTGCAACTAAAAACACTAATCCACATAAGATCCTTGGTTTTATTTACTGATGCTCTAGTCACTTGCCATTTTCTACTGAATTCTCCTTTTCTCCTCATTAGGATCCCTATGTCAATGCTCTGTCCCTGCCTCTAG;MAPQ=60;MATEID=483347:1;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_9_784001_809001_19C;SPAN=662;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:0:3.6:39.6,3.6,0:0:13:-39.61:39.61
9	1096692	483264:2	A	]9:584347]A	24	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=483264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_8C;SPAN=512345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
9	2279343	483943:1	T	T]9:3813164]	23	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=483943:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:2279343(+)-9:3813164(+)__9_3797501_3822501D;SPAN=1533821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
9	3813164	483943:2	T	T]9:2279343]	23	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=483943:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:2279343(+)-9:3813164(+)__9_3797501_3822501D;SPAN=1533821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
9	6888787	484745:1	T	T[9:6889088[	46	PASS	EVDNC=ASSMB;HOMSEQ=CTTCTGTGTTTTTT;MAPQ=60;MATEID=484745:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_6884501_6909501_8C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02
9	6889088	484745:2	C	]9:6888787]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CTTCTGTGTTTTTT;MAPQ=60;MATEID=484745:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_6884501_6909501_8C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02
9	7367657	484878:1	C	]9:7439854]C	62	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=484878:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_7423501_7448501_17C;SPAN=72197;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54
9	7439854	484878:2	G	G[9:7367657[	62	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=484878:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_7423501_7448501_17C;SPAN=72197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54
9	7741406	288543:2	C	C[5:39787650[	64	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=GAGTT;MAPQ=60;MATEID=288543:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_39763501_39788501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:20:12:-67.65:67.65
9	8826067	485180:1	A	]9:8868077]A	79	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=485180:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_8844501_8869501_18C;SPAN=42010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:21:7.2:79.2,7.2,0:26:0:-79.22:79.22
9	8868077	485180:2	G	G[9:8826067[	79	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=485180:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_8844501_8869501_18C;SPAN=42010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:21:7.2:79.2,7.2,0:26:0:-79.22:79.22
9	9054481	485408:1	T	T[9:9712574[	92	PASS	EVDNC=ASSMB;INSERTION=GGCAGTTGAAATAGTAGATATAAAATTATCATGACGTTTACCAGTAATATTTATGAT;MAPQ=60;MATEID=485408:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_9702001_9727001_28C;SPAN=658093;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:14:8.4:92.4,8.4,0:30:0:-92.42:92.42
9	9712574	485408:2	A	]9:9054481]A	92	PASS	EVDNC=ASSMB;INSERTION=GGCAGTTGAAATAGTAGATATAAAATTATCATGACGTTTACCAGTAATATTTATGAT;MAPQ=60;MATEID=485408:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_9702001_9727001_28C;SPAN=658093;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:14:8.4:92.4,8.4,0:30:0:-92.42:92.42
9	10098711	485469:2	A	A[4:117217096[	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=485469:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:117217096(-)-9:10098711(+)__9_10094001_10119001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
9	10841158	485690:2	T	]4:155419067]T	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=485690:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_10829001_10854001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:20:20,0,36.5:8:0:-19.94:20.25
9	10945775	489659:1	A	A[9:30287949[	36	PASS	EVDNC=ASSMB;HOMSEQ=AAGA;MAPQ=60;MATEID=489659:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_17C;SPAN=19342174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31
9	11384325	485861:2	G	G[8:245406[	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=485861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_11368001_11393001_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:4:6:-24.99:24.99
9	15815423	486901:1	T	T[9:15821942[	72	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=486901:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:15815423(+)-9:15821942(-)__9_15802501_15827501D;SPAN=6519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62
9	15821942	486901:2	G	]9:15815423]G	72	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=486901:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:15815423(+)-9:15821942(-)__9_15802501_15827501D;SPAN=6519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62
9	21837129	488016:1	T	T[9:22081242[	29	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=488016:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:21837129(+)-9:22081242(-)__9_22074501_22099501D;SPAN=244113;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	21841795	327574:2	A	A[6:13128174[	49	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=ATCACATCACAGGACTCTTTGCAGACATCCCCCAGCATCAGCTCAGACAGAGCCTGTTGCCCTGCTGAGTGGCTAGACCCAGAAGAGCAATAACAGTCACTGCAGTCCAGGTCTCAAGAAGCCCCATCCCTAGGGGAAGGGGGAGAGCACAACATCAAGGGGTCACCCCTTGGGACAAGAAAATCTGAACAGCAGCCCTTGAGTTTCAAACTTCTC;INSERTION=ACTTCTC;MAPQ=33;MATEID=327574:1;MATENM=0;NM=8;NUMPARTS=4;REPSEQ=CTCT;SCTG=c_6_13107501_13132501_88C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:16:4.5:49.5,4.5,0:13:6:-49.51:49.51
9	22081242	488016:2	C	]9:21837129]C	29	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=488016:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:21837129(+)-9:22081242(-)__9_22074501_22099501D;SPAN=244113;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	22496528	488102:1	T	T[9:22504346[	49	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=488102:2;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_9_22491001_22516001_0C;SPAN=7818;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:10:4.5:49.5,4.5,0:17:0:-49.51:49.51
9	22504346	488102:2	C	]9:22496528]C	49	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=488102:1;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_9_22491001_22516001_0C;SPAN=7818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:10:4.5:49.5,4.5,0:17:0:-49.51:49.51
9	23362803	488288:1	A	A[9:23377688[	42	PASS	EVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=488288:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_9_23373001_23398001_1C;SPAN=14885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:14:0:-42.91:42.91
9	23377688	488288:2	T	]9:23362803]T	42	PASS	EVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=488288:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_9_23373001_23398001_1C;SPAN=14885;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:3:3.9:42.9,3.9,0:14:0:-42.91:42.91
9	24546560	123497:2	G	G]2:162753054]	17	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=123497:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:162753054(+)-9:24546560(+)__2_162729001_162754001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63
9	24908456	488516:1	G	]9:24908668]G	24	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=488516:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_24892001_24917001_15C;SPAN=212;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
9	24908668	488516:2	A	A[9:24908456[	24	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=488516:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_24892001_24917001_15C;SPAN=212;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91
9	24980783	488542:1	G	G]Un_KN707681v1_decoy:4379]	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=488542:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_24965501_24990501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31
9	25849461	12984:2	T	]1:53953226]T	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12984:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:6:6:-22.05:23.72
9	26921863	488914:1	T	T[9:27029400[	46	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=488914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_27023501_27048501_9C;SPAN=107537;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:15:0:-46.21:46.21
9	27029400	488914:2	A	]9:26921863]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=488914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_27023501_27048501_9C;SPAN=107537;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:15:0:-46.21:46.21
9	28733895	489296:1	A	]9:28736771]A	24	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=489296:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_28714001_28739001_0C;SPAN=2876;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
9	28736771	489296:2	C	C[9:28733895[	24	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=489296:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_28714001_28739001_0C;SPAN=2876;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
9	29653849	13059:2	A	A[1:53954656[	7	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=13059:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_206C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:90:7.7:7.7,0,218.9:10:0:-7.712:19.71
9	29661186	489518:1	A	A[9:29664028[	25	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=489518:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_29645001_29670001_21C;SPAN=2842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35
9	29664028	489518:2	T	]9:29661186]T	25	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=489518:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_29645001_29670001_21C;SPAN=2842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35
9	30287949	489659:2	A	]9:10945775]A	36	PASS	EVDNC=ASSMB;HOMSEQ=AAGA;MAPQ=60;MATEID=489659:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_17C;SPAN=19342174;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31
9	30288138	489652:2	G	]4:145607589]G	40	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=489652:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_41C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
9	30288184	702277:1	T	T[14:64280428[	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=702277:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_64263501_64288501_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
9	30288228	489646:2	G	[4:124756824[G	34	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AGGA;INSERTION=AAC;MAPQ=60;MATEID=489646:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=CAACAA;SCTG=c_9_30282001_30307001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:11.3:34.7,0,11.3:16:2:-35.31:35.31
9	30288439	489643:2	T	T]4:105671811]	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGT;MAPQ=60;MATEID=489643:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_56C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:10:5.1:56.1,5.1,0:14:5:-56.11:56.11
9	30690082	945666:1	T	T]X:136874391]	32	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=945666:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:30690082(+)-23:136874391(+)__23_136857001_136882001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57
9	33423378	490422:1	T	T[9:33424657[	23	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATCTAGTTTTT;MAPQ=60;MATEID=490422:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_33418001_33443001_20C;SPAN=1279;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
9	33424657	490422:2	A	]9:33423378]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATCTAGTTTTT;MAPQ=60;MATEID=490422:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_33418001_33443001_20C;SPAN=1279;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
9	34681484	490777:1	T	]9:34681981]T	72	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=490777:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_34667501_34692501_8C;SPAN=497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76
9	34681981	490777:2	G	G[9:34681484[	72	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=490777:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_34667501_34692501_8C;SPAN=497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76
9	36362899	491079:1	T	T[9:36364083[	75	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCT;MAPQ=60;MATEID=491079:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_36358001_36383001_4C;SPAN=1184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:17:15:-75.92:75.92
9	36364083	491079:2	G	]9:36362899]G	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCT;MAPQ=60;MATEID=491079:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_36358001_36383001_4C;SPAN=1184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:17:15:-75.92:75.92
9	36423668	491100:1	G	]13:73390558]G	56	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=G;MAPQ=22;MATEID=491100:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_36407001_36432001_29C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:14:6:-56.11:56.11
9	37090389	491310:1	A	]9:37377642]A	29	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=491310:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:37090389(-)-9:37377642(+)__9_37362501_37387501D;SPAN=287253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	37377642	491310:2	G	G[9:37090389[	29	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=491310:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:37090389(-)-9:37377642(+)__9_37362501_37387501D;SPAN=287253;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	40899697	492400:1	A	A[9:40902847[	36	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=492400:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40899697(+)-9:40902847(-)__9_40890501_40915501D;SPAN=3150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05
9	40902847	492400:2	T	]9:40899697]T	36	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=492400:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40899697(+)-9:40902847(-)__9_40890501_40915501D;SPAN=3150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05
9	40923207	492711:1	C	C[9:40924335[	25	PASS	EVDNC=ASSMB;HOMSEQ=GGATTCCAGAACACTCCTGC;MAPQ=60;MATEID=492711:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_40915001_40940001_43C;SPAN=1128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:74:25.4:25.4,0,160.7:14:0:-25.41:31.1
9	40924335	492711:2	G	]9:40923207]G	25	PASS	EVDNC=ASSMB;HOMSEQ=GGATTCCAGAACACTCCTGC;MAPQ=60;MATEID=492711:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_40915001_40940001_43C;SPAN=1128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:74:25.4:25.4,0,160.7:14:0:-25.41:31.1
9	40929455	492742:1	A	A]9:63918421]	28	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=492742:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40929455(+)-9:63918421(+)__9_40915001_40940001D;SPAN=22988966;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:0:11:-28.16:28.37
9	41047840	232702:2	T	T[4:61939924[	26	PASS	DISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=44;MATEID=232702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61936001_61961001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:8:5:-26.41:26.41
9	41237750	495356:1	G	G[9:62802569[	33	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=495356:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:41237750(+)-9:62802569(-)__9_62793501_62818501D;SPAN=21564819;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:57:33.5:33.5,0,109.4:0:15:-33.49:35.77
9	42258584	493761:1	G	G[9:42259464[	47	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=493761:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:42258584(+)-9:42259464(-)__9_42238001_42263001D;SPAN=880;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:0:17:-48.35:48.35
9	42259464	493761:2	A	]9:42258584]A	47	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=493761:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:42258584(+)-9:42259464(-)__9_42238001_42263001D;SPAN=880;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:0:17:-48.35:48.35
9	42387022	493824:1	T	T[9:42387326[	43	PASS	EVDNC=ASSMB;HOMSEQ=AATTTGTGT;MAPQ=60;MATEID=493824:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_42385001_42410001_40C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
9	42387326	493824:2	A	]9:42387022]A	43	PASS	EVDNC=ASSMB;HOMSEQ=AATTTGTGT;MAPQ=60;MATEID=493824:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_42385001_42410001_40C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
9	43197994	494276:1	T	]9:43199957]T	99	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=494276:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:43197994(-)-9:43199957(+)__9_43193501_43218501D;SPAN=1963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:47:13.8:151.8,13.8,0:0:50:-151.8:151.8
9	43199957	494276:2	T	T[9:43197994[	99	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=494276:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:43197994(-)-9:43199957(+)__9_43193501_43218501D;SPAN=1963;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:47:13.8:151.8,13.8,0:0:50:-151.8:151.8
9	45021766	494722:1	C	]9:45152397]C	42	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=494722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:45021766(-)-9:45152397(+)__9_45129001_45154001D;SPAN=130631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91
9	45152397	494722:2	T	T[9:45021766[	42	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=494722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:45021766(-)-9:45152397(+)__9_45129001_45154001D;SPAN=130631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91
9	61735346	873198:1	A	A[20:29636132[	36	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=873198:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:61735346(+)-20:29636132(-)__20_29620501_29645501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66
9	62802569	495356:2	G	]9:41237750]G	33	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=495356:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:41237750(+)-9:62802569(-)__9_62793501_62818501D;SPAN=21564819;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:57:33.5:33.5,0,109.4:0:15:-33.49:35.77
9	63843968	870923:1	C	C]20:29090598]	39	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=870923:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:63843968(+)-20:29090598(+)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:83:39.5:39.5,0,168.2:0:19:-39.39:43.98
9	63918421	492742:2	G	G]9:40929455]	28	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=492742:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40929455(+)-9:63918421(+)__9_40915001_40940001D;SPAN=22988966;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:0:11:-28.16:28.37
9	65079191	822950:1	T	T[18:15598663[	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=822950:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:65079191(+)-18:15598663(-)__18_15582001_15607001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
9	65437620	496905:2	T	[4:3594169[T	23	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=496905:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:3594169(-)-9:65437620(-)__9_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
9	69123206	497862:1	C	C[9:69128439[	59	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=497862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_69114501_69139501_19C;SPAN=5233;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41
9	69128439	497862:2	A	]9:69123206]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=497862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_69114501_69139501_19C;SPAN=5233;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41
9	69278069	404355:2	T	]7:72499762]T	13	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=404355:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:72499762(+)-9:69278069(-)__7_72495501_72520501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:46:13.7:13.7,0,99.5:0:8:-13.48:17.45
9	69280450	497903:1	T	T[9:69281647[	39	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=497903:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:69280450(+)-9:69281647(-)__9_69261501_69286501D;SPAN=1197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
9	69281647	497903:2	T	]9:69280450]T	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=497903:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:69280450(+)-9:69281647(-)__9_69261501_69286501D;SPAN=1197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
9	74283223	499130:1	A	[9:74283474[A	75	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=ACCTTCAAAGGCTGCAATTGGCCAGTTTGCTGAAGCAGCATTGCTGATTAGTTGATTAAATTAATAAAATGGGGCTTTTGCTACCACTGCATTATCAAAGTGTTACCCAACGATAAGTCCTTGAAAATATGTAAAATAAGTTAAAAGAGAGAAGAAACTGAGAAAGCCATTCATGACCACTGACAGAATTATGTCTCCATGGTGGGCTGGCAGGGCAGAGCAGTGGCCCTCTGCTGTGATCCCCTTCAAAGAACCCCCTGAGCCACCCAAAGAAAGCTGATGTGTCCACGGTTCTGTTCTTTTCAGGGGTAGATGTAGGTGGG;MAPQ=60;MATEID=499130:2;MATENM=9;NM=1;NUMPARTS=3;REPSEQ=GGG;SCTG=c_9_74284001_74309001_0C;SPAN=251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:0:6.9:75.9,6.9,0:25:0:-75.92:75.92
9	74283474	499130:2	G	[9:74283223[G	75	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=ACCTTCAAAGGCTGCAATTGGCCAGTTTGCTGAAGCAGCATTGCTGATTAGTTGATTAAATTAATAAAATGGGGCTTTTGCTACCACTGCATTATCAAAGTGTTACCCAACGATAAGTCCTTGAAAATATGTAAAATAAGTTAAAAGAGAGAAGAAACTGAGAAAGCCATTCATGACCACTGACAGAATTATGTCTCCATGGTGGGCTGGCAGGGCAGAGCAGTGGCCCTCTGCTGTGATCCCCTTCAAAGAACCCCCTGAGCCACCCAAAGAAAGCTGATGTGTCCACGGTTCTGTTCTTTTCAGGGGTAGATGTAGGTGGG;MAPQ=60;MATEID=499130:1;MATENM=1;NM=9;NUMPARTS=3;REPSEQ=GGG;SCTG=c_9_74284001_74309001_0C;SPAN=251;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:0:6.9:75.9,6.9,0:25:0:-75.92:75.92
9	75533771	885083:1	T	[20:52043400[T	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=885083:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_52038001_52063001_156C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:36:36.2:52.7,0,36.2:14:14:-52.72:52.72
9	76304638	499637:1	T	T[9:76307080[	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=499637:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:76304638(+)-9:76307080(-)__9_76293001_76318001D;SPAN=2442;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
9	76307080	499637:2	A	]9:76304638]A	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=499637:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:76304638(+)-9:76307080(-)__9_76293001_76318001D;SPAN=2442;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
9	76940846	499922:1	A	A[9:76943186[	66	PASS	EVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=499922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_76930001_76955001_81C;SPAN=2340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:33:14:66.8,0,14:23:0:-68.34:68.34
9	76943186	499922:2	T	]9:76940846]T	66	PASS	EVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=499922:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_76930001_76955001_81C;SPAN=2340;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:33:14:66.8,0,14:23:0:-68.34:68.34
9	79110862	500588:1	T	T[9:79111167[	33	PASS	EVDNC=ASSMB;HOMSEQ=CTAATGCAGGATTTTCT;MAPQ=60;MATEID=500588:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_79110501_79135501_48C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
9	79111167	500588:2	C	]9:79110862]C	33	PASS	EVDNC=ASSMB;HOMSEQ=CTAATGCAGGATTTTCT;MAPQ=60;MATEID=500588:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_79110501_79135501_48C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
9	80230263	500915:1	T	T[9:80230583[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTCTT;MAPQ=60;MATEID=500915:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_9_80213001_80238001_109C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:7:9:-35.04:35.04
9	80230583	500915:2	T	]9:80230263]T	35	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTTTTCTT;MAPQ=60;MATEID=500915:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_9_80213001_80238001_109C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:7:9:-35.04:35.04
9	81353010	501453:1	C	C[9:81355769[	60	PASS	EVDNC=ASSMB;HOMSEQ=TTTATAGC;MAPQ=60;MATEID=501453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81340001_81365001_30C;SPAN=2759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:33:20.6:60.2,0,20.6:21:0:-60.95:60.95
9	81355769	501453:2	T	]9:81353010]T	60	PASS	EVDNC=ASSMB;HOMSEQ=TTTATAGC;MAPQ=60;MATEID=501453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81340001_81365001_30C;SPAN=2759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:33:20.6:60.2,0,20.6:21:0:-60.95:60.95
9	81709448	501562:1	C	C[9:81712012[	7	PASS	EVDNC=ASSMB;HOMSEQ=TAAAATGGCTCTAGC;MAPQ=60;MATEID=501562:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81707501_81732501_4C;SPAN=2564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:292:7.3:7.3,0,726.8:27:0:-7.048:50.93
9	81712012	501562:2	T	]9:81709448]T	7	PASS	EVDNC=ASSMB;HOMSEQ=TAAAATGGCTCTAGC;MAPQ=60;MATEID=501562:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81707501_81732501_4C;SPAN=2564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:292:7.3:7.3,0,726.8:27:0:-7.048:50.93
9	83888182	502921:1	C	[9:85841178[C	14	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=502921:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:83888182(-)-9:85841178(-)__9_85823501_85848501D;SPAN=1952996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
9	85286501	502766:1	T	T[9:85286798[	41	PASS	EVDNC=ASSMB;HOMSEQ=TACATGTCTTT;MAPQ=60;MATEID=502766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_85284501_85309501_72C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81
9	85286798	502766:2	T	]9:85286501]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TACATGTCTTT;MAPQ=60;MATEID=502766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_85284501_85309501_72C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81
9	85841178	502921:2	T	[9:83888182[T	14	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=502921:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:83888182(-)-9:85841178(-)__9_85823501_85848501D;SPAN=1952996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
9	86052951	502981:1	A	]9:86053805]A	38	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=502981:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:86052951(-)-9:86053805(+)__9_86044001_86069001D;SPAN=854;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:51:38.6:38.6,0,88.1:0:16:-38.48:39.62
9	86053805	502981:2	A	A[9:86052951[	38	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=502981:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:86052951(-)-9:86053805(+)__9_86044001_86069001D;SPAN=854;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:51:38.6:38.6,0,88.1:0:16:-38.48:39.62
9	86539642	503199:1	T	T[9:86541032[	99	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=A;INSERTION=TATTGTGGGCCATGCCTTTTGATCATATTAGCTAGCAAGAGCTCCAGGTTTCCTCTCCATAATGAAAATTTTTGAGCCTAACAATAGTCAA;MAPQ=60;MATEID=503199:2;MATENM=3;NM=1;NUMPARTS=3;SCTG=c_9_86534001_86559001_5C;SPAN=1390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:14:10.5:115.5,10.5,0:37:5:-115.5:115.5
9	86541032	503199:2	A	]9:86539642]A	99	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=A;INSERTION=TATTGTGGGCCATGCCTTTTGATCATATTAGCTAGCAAGAGCTCCAGGTTTCCTCTCCATAATGAAAATTTTTGAGCCTAACAATAGTCAA;MAPQ=60;MATEID=503199:1;MATENM=1;NM=3;NUMPARTS=3;SCTG=c_9_86534001_86559001_5C;SPAN=1390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:14:10.5:115.5,10.5,0:37:5:-115.5:115.5
9	87184187	503415:1	T	T[9:87184493[	47	PASS	EVDNC=ASSMB;HOMSEQ=AATTTTTTT;MAPQ=60;MATEID=503415:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_87171001_87196001_87C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
9	87184493	503415:2	A	]9:87184187]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AATTTTTTT;MAPQ=60;MATEID=503415:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_87171001_87196001_87C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
9	88244081	503895:1	T	T[9:88246049[	99	PASS	EVDNC=ASSMB;HOMSEQ=TTATGTACCTTTT;MAPQ=60;MATEID=503895:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_88224501_88249501_5C;SPAN=1968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:52:4.5:138.6,4.5,0:45:0:-143:143
9	88246049	503895:2	T	]9:88244081]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TTATGTACCTTTT;MAPQ=60;MATEID=503895:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_88224501_88249501_5C;SPAN=1968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:52:4.5:138.6,4.5,0:45:0:-143:143
9	88370208	516185:1	G	]9:125174450]G	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=516185:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_40C;SPAN=36804242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66
9	88370788	516187:1	C	C[9:125174450[	53	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=516187:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_111C;SPAN=36803662;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
9	88385279	503963:1	T	T[20:47190406[	35	PASS	EVDNC=ASSMB;INSERTION=CAAAGCTAAAAAATGTAGG;MAPQ=60;MATEID=503963:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_88371501_88396501_10C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:13:0:-35.04:35.04
9	89437208	504384:2	A	]1:109198402]A	42	PASS	EVDNC=ASSMB;INSERTION=ACCATATATATAAATGTATGGCTGGAGA;MAPQ=60;MATEID=504384:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_89425001_89450001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9
9	89730120	504478:1	A	]9:89730492]A	13	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=504478:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:89730120(-)-9:89730492(+)__9_89719001_89744001D;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:0:8:-13.76:17.53
9	89730492	504478:2	G	G[9:89730120[	13	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=504478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:89730120(-)-9:89730492(+)__9_89719001_89744001D;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:0:8:-13.76:17.53
9	89854059	509734:1	T	T]9:107177389]	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=509734:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107163001_107188001_56C;SPAN=17323330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:9:4:-27.41:27.41
9	90432262	504759:2	T	T[8:63059041[	25	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TTTTTTTTTGAGACGG;INSERTION=TTTTTTGTTGTTGTTG;MAPQ=60;MATEID=504759:1;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_9_90429501_90454501_9C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46
9	93708073	505789:1	C	C[9:93709183[	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=505789:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_93688001_93713001_43C;SPAN=1110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
9	93709183	505789:2	C	]9:93708073]C	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=505789:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_93688001_93713001_43C;SPAN=1110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
9	93737881	505800:1	T	T[9:93740761[	49	PASS	EVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=505800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_93737001_93762001_14C;SPAN=2880;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
9	93740761	505800:2	A	]9:93737881]A	49	PASS	EVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=505800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_93737001_93762001_14C;SPAN=2880;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
9	94543397	505978:2	G	[4:135169406[G	22	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=505978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:135169406(-)-9:94543397(-)__9_94521001_94546001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
9	96822325	506693:1	A	]9:96896934]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=506693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_96873001_96898001_3C;SPAN=74609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
9	96896934	506693:2	T	T[9:96822325[	58	PASS	EVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=506693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_96873001_96898001_3C;SPAN=74609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
9	97902289	405771:2	T	[7:74689123[T	55	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGTAAAAATAATAAAAATAATAAACGGAGCTGCCTGGAGGCGGCCGCACTCG;MAPQ=60;MATEID=405771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_30C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:50:55.4:55.4,0,68.6:19:2:-55.27:55.37
9	98546766	507067:1	A	A[9:98549383[	99	PASS	EVDNC=ASSMB;HOMSEQ=TCTCA;MAPQ=60;MATEID=507067:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98539001_98564001_7C;SPAN=2617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:46:9.3:132,9.3,0:41:0:-131.9:131.9
9	98549383	507067:2	T	]9:98546766]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TCTCA;MAPQ=60;MATEID=507067:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98539001_98564001_7C;SPAN=2617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:46:9.3:132,9.3,0:41:0:-131.9:131.9
9	98577128	507084:1	A	]9:98577228]A	25	PASS	EVDNC=ASSMB;HOMSEQ=ATGGATGGATGGATGGATGGATGGA;MAPQ=60;MATEID=507084:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_98563501_98588501_62C;SPAN=100;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:87:25.1:25.1,0,193.4:15:0:-25.06:32.65
9	98577228	507084:2	A	A[9:98577128[	25	PASS	EVDNC=ASSMB;HOMSEQ=ATGGATGGATGGATGGATGGATGGA;MAPQ=60;MATEID=507084:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_62C;SPAN=100;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:87:25.1:25.1,0,193.4:15:0:-25.06:32.65
9	98585704	507086:1	T	T[9:98586035[	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=507086:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_72C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
9	98586035	507086:2	T	]9:98585704]T	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=507086:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_72C;SPAN=331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
9	98712914	917272:1	C	]22:32179921]C	46	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=917272:2;MATENM=1;NM=7;NUMPARTS=3;SCTG=c_22_32168501_32193501_13C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:11:9:-46.21:46.21
9	98715302	917274:1	T	T[22:32179925[	62	PASS	DISC_MAPQ=30;EVDNC=ASDIS;INSERTION=GCATGGTGAGTCT;MAPQ=60;MATEID=917274:2;MATENM=2;NM=35;NUMPARTS=2;SCTG=c_22_32168501_32193501_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:19:7:-62.72:62.72
9	101419834	507872:1	C	]9:101420140]C	9	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=507872:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_101405501_101430501_15C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:8:0:-9.824:16.5
9	101420140	507872:2	A	A[9:101419834[	9	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=507872:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_101405501_101430501_15C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:8:0:-9.824:16.5
9	101681697	508021:1	T	T[9:101682446[	99	PASS	EVDNC=ASSMB;HOMSEQ=GAATATATCCCTATTCTT;MAPQ=60;MATEID=508021:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101675001_101700001_19C;SPAN=749;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:22:11.4:125.4,11.4,0:41:0:-125.4:125.4
9	101682446	508021:2	G	]9:101681697]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GAATATATCCCTATTCTT;MAPQ=60;MATEID=508021:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101675001_101700001_19C;SPAN=749;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:22:11.4:125.4,11.4,0:41:0:-125.4:125.4
9	101898793	508069:1	A	A[9:101905675[	79	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=508069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101895501_101920501_47C;SPAN=6882;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:26:0:-81.69:81.69
9	101905675	508069:2	G	]9:101898793]G	79	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=508069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101895501_101920501_47C;SPAN=6882;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:31:1.8:79.2,1.8,0:26:0:-81.69:81.69
9	102716959	508265:1	T	]9:102730923]T	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=508265:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_102728501_102753501_236C;SPAN=13964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:9:9:-36.29:36.29
9	102730923	508265:2	G	G[9:102716959[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=508265:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_102728501_102753501_236C;SPAN=13964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:9:9:-36.29:36.29
9	103806086	508606:1	T	T[9:103807448[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=508606:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:103806086(+)-9:103807448(-)__9_103782001_103807001D;SPAN=1362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
9	103807448	508606:2	A	]9:103806086]A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=508606:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:103806086(+)-9:103807448(-)__9_103782001_103807001D;SPAN=1362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
9	104334655	508742:1	G	G[9:104335428[	17	PASS	EVDNC=ASSMB;INSERTION=AATTTATTATCTA;MAPQ=60;MATEID=508742:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104321001_104346001_28C;SPAN=773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:44:17.3:17.3,0,93.2:9:0:-17.34:20.33
9	104335428	508742:2	T	]9:104334655]T	17	PASS	EVDNC=ASSMB;INSERTION=AATTTATTATCTA;MAPQ=60;MATEID=508742:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104321001_104346001_28C;SPAN=773;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:44:17.3:17.3,0,93.2:9:0:-17.34:20.33
9	104600936	508836:1	T	]9:104607160]T	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTAATTTCTTGAAATAAGAAGAAAAATTCTTATTTCCTCCT;MAPQ=60;MATEID=508836:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_104590501_104615501_30C;SPAN=6224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:34:36.8:46.7,0,36.8:13:5:-46.59:46.59
9	104607160	508836:2	T	T[9:104600936[	46	PASS	DISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=TCTAATTTCTTGAAATAAGAAGAAAAATTCTTATTTCCTCCT;MAPQ=60;MATEID=508836:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_104590501_104615501_30C;SPAN=6224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:34:36.8:46.7,0,36.8:13:5:-46.59:46.59
9	104638707	508859:1	T	T[9:104639007[	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAATCCTCCTT;MAPQ=60;MATEID=508859:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_104615001_104640001_147C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:12:6:-46.5:46.5
9	104639007	508859:2	A	]9:104638707]A	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAATCCTCCTT;MAPQ=60;MATEID=508859:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_104615001_104640001_147C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:12:6:-46.5:46.5
9	104854285	508919:2	T	[1:109194083[T	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGTCTCCAGGACATTTTTGTATA;MAPQ=60;MATEID=508919:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104835501_104860501_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:12:10:-45.49:45.49
9	105054371	509026:1	T	[9:105055067[T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=ACATACATAACTAGA;MAPQ=60;MATEID=509026:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_105031501_105056501_7C;SPAN=696;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:62:15.8:137.9,0,15.8:31:30:-143:143
9	105055067	509026:2	C	[9:105054371[C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=ACATACATAACTAGA;MAPQ=60;MATEID=509026:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_105031501_105056501_7C;SPAN=696;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:47:62:15.8:137.9,0,15.8:31:30:-143:143
9	106261848	509449:1	T	T[9:106262147[	75	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAAACCTT;MAPQ=60;MATEID=509449:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_106256501_106281501_16C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:25:6.9:75.9,6.9,0:25:0:-75.92:75.92
9	106262147	509449:2	A	]9:106261848]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAAACCTT;MAPQ=60;MATEID=509449:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_106256501_106281501_16C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:25:6.9:75.9,6.9,0:25:0:-75.92:75.92
9	106788574	509629:2	C	C[4:170678003[	20	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=509629:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:170678003(-)-9:106788574(+)__9_106771001_106796001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45
9	107177389	509734:2	T	T]9:89854059]	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=509734:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107163001_107188001_56C;SPAN=17323330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:9:4:-27.41:27.41
9	107182828	760282:1	A	A[16:31371775[	24	PASS	EVDNC=ASSMB;INSERTION=TATATACATTAAACAA;MAPQ=60;MATEID=760282:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_31360001_31385001_63C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
9	107256005	509779:1	T	T[9:107258568[	99	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATCTT;MAPQ=60;MATEID=509779:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_9_107236501_107261501_40C;SPAN=2563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:67:34.1:133.1,0,34.1:46:0:-136.1:136.1
9	107258568	509779:2	A	]9:107256005]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ATAAATCTT;MAPQ=60;MATEID=509779:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_9_107236501_107261501_40C;SPAN=2563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:67:34.1:133.1,0,34.1:46:0:-136.1:136.1
9	107271163	509785:1	T	T[9:107273174[	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=509785:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107261001_107286001_70C;SPAN=2011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:33:9:99,9,0:32:0:-99.02:99.02
9	107273174	509785:2	A	]9:107271163]A	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=509785:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107261001_107286001_70C;SPAN=2011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:33:9:99,9,0:32:0:-99.02:99.02
9	107775254	509965:1	A	A[9:107778315[	89	PASS	EVDNC=ASSMB;HOMSEQ=TAAAAATATTTTGTA;MAPQ=60;MATEID=509965:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_9_107775501_107800501_26C;SPAN=3061;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12
9	107778315	509965:2	T	]9:107775254]T	89	PASS	EVDNC=ASSMB;HOMSEQ=TAAAAATATTTTGTA;MAPQ=60;MATEID=509965:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_9_107775501_107800501_26C;SPAN=3061;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12
9	108352880	427922:2	T	[7:134739891[T	26	PASS	DISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=TAAAATTATG;MAPQ=60;MATEID=427922:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_134725501_134750501_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:8:2:-26.41:26.41
9	109410883	510495:2	G	]8:103833107]G	32	PASS	EVDNC=ASSMB;INSERTION=GCATTTTTT;MAPQ=60;MATEID=510495:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_109392501_109417501_62C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
9	109523566	510532:1	A	]9:109524282]A	91	PASS	EVDNC=ASSMB;INSERTION=TGA;MAPQ=60;MATEID=510532:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_109515001_109540001_9C;SPAN=716;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:38:2.6:91.7,0,2.6:31:0:-96.48:96.48
9	109524282	510532:2	C	C[9:109523566[	91	PASS	EVDNC=ASSMB;INSERTION=TGA;MAPQ=60;MATEID=510532:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_109515001_109540001_9C;SPAN=716;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:38:2.6:91.7,0,2.6:31:0:-96.48:96.48
9	111642641	511441:2	A	A[2:130210907[	42	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=511441:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_111622001_111647001_71C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:15:2:-43.34:43.34
9	112100475	321578:2	C	C]5:179299294]	42	PASS	DISC_MAPQ=10;EVDNC=ASDIS;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=31;MATEID=321578:1;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_5_179291001_179316001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:12:2:-42.91:42.91
9	112140079	511668:1	G	G[9:112140378[	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATACAAAAATTG;MAPQ=60;MATEID=511668:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_112136501_112161501_10C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
9	112140378	511668:2	A	]9:112140079]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATACAAAAATTG;MAPQ=60;MATEID=511668:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_112136501_112161501_10C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
9	113174817	512193:1	A	A[9:113175100[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGCTAGGGAA;MAPQ=60;MATEID=512193:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_113165501_113190501_64C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:27:9.6:105.6,9.6,0:35:0:-105.6:105.6
9	113175100	512193:2	A	]9:113174817]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGCTAGGGAA;MAPQ=60;MATEID=512193:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_113165501_113190501_64C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:27:9.6:105.6,9.6,0:35:0:-105.6:105.6
9	115473327	513034:1	G	G[9:115478586[	58	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=513034:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:115473327(+)-9:115478586(-)__9_115468501_115493501D;SPAN=5259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:40:41.6:58.1,0,41.6:0:21:-58.2:58.2
9	115478586	513034:2	C	]9:115473327]C	58	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=513034:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:115473327(+)-9:115478586(-)__9_115468501_115493501D;SPAN=5259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:40:41.6:58.1,0,41.6:0:21:-58.2:58.2
9	116620017	513469:1	A	A[9:116895019[	29	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=513469:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116889501_116914501_6C;SPAN=275002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
9	116714798	513418:1	G	G[9:116715119[	52	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATCATGTGAG;MAPQ=60;MATEID=513418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116693501_116718501_2C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
9	116715119	513418:2	A	]9:116714798]A	52	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATCATGTGAG;MAPQ=60;MATEID=513418:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116693501_116718501_2C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
9	116756723	513444:1	C	C[9:116882005[	69	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=513444:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_116742501_116767501_27C;SPAN=125282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:8:6.3:69.3,6.3,0:23:0:-69.32:69.32
9	116773796	513457:1	A	A[9:116820072[	39	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=513457:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_116816001_116841001_30C;SPAN=46276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:3:3.6:39.6,3.6,0:13:0:-39.61:39.61
9	116820072	513457:2	A	]9:116773796]A	39	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=513457:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_116816001_116841001_30C;SPAN=46276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:3:3.6:39.6,3.6,0:13:0:-39.61:39.61
9	116882005	513444:2	C	]9:116756723]C	69	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=513444:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_116742501_116767501_27C;SPAN=125282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:8:6.3:69.3,6.3,0:23:0:-69.32:69.32
9	116895019	513469:2	A	]9:116620017]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=513469:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116889501_116914501_6C;SPAN=275002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
9	117057123	513582:1	G	]9:117100182]G	41	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=513582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_117085501_117110501_29C;SPAN=43059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
9	117100182	513582:2	G	G[9:117057123[	41	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=513582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_117085501_117110501_29C;SPAN=43059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
9	117377297	723297:1	T	[15:29700693[T	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=723297:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_29694001_29719001_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:6:8:-39.61:39.61
9	118242011	513972:1	C	]9:118247603]C	17	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=513972:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:118242011(-)-9:118247603(+)__9_118237001_118262001D;SPAN=5592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:46:17:17,0,96.2:0:9:-16.78:20.14
9	118247603	513972:2	A	A[9:118242011[	17	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=513972:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:118242011(-)-9:118247603(+)__9_118237001_118262001D;SPAN=5592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:46:17:17,0,96.2:0:9:-16.78:20.14
9	119030599	514253:1	T	T[9:119031168[	13	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=514253:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119021001_119046001_3C;SPAN=569;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
9	119031168	514253:2	T	]9:119030599]T	13	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=514253:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119021001_119046001_3C;SPAN=569;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
9	119769567	514485:1	C	C[9:119769875[	72	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATTGC;MAPQ=60;MATEID=514485:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119756001_119781001_19C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
9	119769875	514485:2	A	]9:119769567]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATTGC;MAPQ=60;MATEID=514485:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119756001_119781001_19C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
9	119887340	748564:1	T	]16:909933]T	32	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=748564:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_906501_931501_32C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
9	120805084	514776:2	A	[4:169821466[A	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=514776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120785001_120810001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:6:3:-21.56:22.23
9	120805215	266207:2	G	G]4:169866444]	25	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=266207:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_169858501_169883501_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:4:6:-25.35:25.35
9	120965446	514833:1	G	G[9:120965847[	18	PASS	EVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=514833:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120956501_120981501_77C;SPAN=401;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65
9	120965847	514833:2	C	]9:120965446]C	18	PASS	EVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=514833:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120956501_120981501_77C;SPAN=401;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65
9	121464631	514986:1	A	]9:121465541]A	49	PASS	EVDNC=ASSMB;INSERTION=AAACA;MAPQ=60;MATEID=514986:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_121446501_121471501_60C;SPAN=910;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:47:49.7:49.7,0,66.2:19:0:-49.51:49.68
9	121465541	514986:2	A	A[9:121464631[	49	PASS	EVDNC=ASSMB;INSERTION=AAACA;MAPQ=60;MATEID=514986:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_121446501_121471501_60C;SPAN=910;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:47:49.7:49.7,0,66.2:19:0:-49.51:49.68
9	122576590	864265:1	G	]20:15095882]G	29	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=864265:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15092001_15117001_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:10:0:-29.71:29.71
9	122577102	864334:1	A	A[20:15405783[	39	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=864334:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15386001_15411001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61
9	123223155	515633:1	C	]9:123448482]C	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=515633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_123431001_123456001_31C;SPAN=225327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43
9	123383698	515665:1	G	]9:123559605]G	24	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=515665:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:123383698(-)-9:123559605(+)__9_123553501_123578501D;SPAN=175907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
9	123448482	515633:2	G	G[9:123223155[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=515633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_123431001_123456001_31C;SPAN=225327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43
9	123559605	515665:2	T	T[9:123383698[	24	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=515665:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:123383698(-)-9:123559605(+)__9_123553501_123578501D;SPAN=175907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
9	124441172	516013:1	C	]9:124656822]C	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=516013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_124656001_124681001_23C;SPAN=215650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:4:7:-22.25:22.25
9	124656822	516013:2	A	A[9:124441172[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=516013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_124656001_124681001_23C;SPAN=215650;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:4:7:-22.25:22.25
9	125123053	836323:1	C	[18:74044264[C	46	PASS	DISC_MAPQ=41;EVDNC=ASDIS;INSERTION=AGATA;MAPQ=60;MATEID=836323:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_18_74039001_74064001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:12:4:-46.21:46.21
9	125123230	836324:1	G	G]18:74044279]	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=836324:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_18_74039001_74064001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:15:6:-56.11:56.11
9	125174450	516187:2	T	]9:88370788]T	53	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=516187:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_111C;SPAN=36803662;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
9	125174450	516185:2	T	T[9:88370208[	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=516185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_40C;SPAN=36804242;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66
9	128138847	517175:1	C	C[9:128139780[	85	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=GGTAAGAGGGGCTGGCTCTCAGTCCC;MAPQ=60;MATEID=517175:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_9_128135001_128160001_33C;SPAN=933;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:15:15:-85.82:85.82
9	128139780	517175:2	G	]9:128138847]G	85	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGTAAGAGGGGCTGGCTCTCAGTCCC;MAPQ=60;MATEID=517175:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_9_128135001_128160001_33C;SPAN=933;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:15:15:-85.82:85.82
9	128649826	517321:1	C	C[9:128651644[	29	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=517321:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:128649826(+)-9:128651644(-)__9_128649501_128674501D;SPAN=1818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	128651644	517321:2	G	]9:128649826]G	29	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=517321:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:128649826(+)-9:128651644(-)__9_128649501_128674501D;SPAN=1818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71
9	128694869	517334:2	T	T[2:115619092[	27	PASS	EVDNC=ASSMB;HOMSEQ=GTCTCT;MAPQ=60;MATEID=517334:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_9_128674001_128699001_56C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77
9	128696493	517337:2	A	A]2:115619217]	48	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=517337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:115619217(+)-9:128696493(+)__9_128674001_128699001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:0:17:-48.77:48.77
9	128801967	517379:1	T	T[9:128802259[	33	PASS	EVDNC=ASSMB;HOMSEQ=TGTT;MAPQ=60;MATEID=517379:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_128796501_128821501_18C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
9	128802259	517379:2	T	]9:128801967]T	33	PASS	EVDNC=ASSMB;HOMSEQ=TGTT;MAPQ=60;MATEID=517379:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_128796501_128821501_18C;SPAN=292;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
9	128938673	517440:1	T	T[9:128939830[	99	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTCCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCT;MAPQ=60;MATEID=517440:2;MATENM=7;NM=4;NUMPARTS=2;SCTG=c_9_128919001_128944001_27C;SPAN=1157;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:6:12.6:138.6,12.6,0:10:38:-138.6:138.6
9	128939830	517440:2	T	]9:128938673]T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTCCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCT;MAPQ=60;MATEID=517440:1;MATENM=4;NM=7;NUMPARTS=2;SCTG=c_9_128919001_128944001_27C;SPAN=1157;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:6:12.6:138.6,12.6,0:10:38:-138.6:138.6
9	129264421	517552:1	T	T[9:129265791[	22	PASS	EVDNC=ASSMB;HOMSEQ=GCTGGGATTACAGGT;MAPQ=60;MATEID=517552:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_129262001_129287001_128C;SPAN=1370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
9	129265791	517552:2	G	]9:129264421]G	22	PASS	EVDNC=ASSMB;HOMSEQ=GCTGGGATTACAGGT;MAPQ=60;MATEID=517552:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_129262001_129287001_128C;SPAN=1370;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
9	129396438	517595:1	G	]9:129397012]G	69	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=517595:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:129396438(-)-9:129397012(+)__9_129384501_129409501D;SPAN=574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:47:46.4:69.5,0,46.4:0:25:-69.5:69.5
9	129397012	517595:2	G	G[9:129396438[	69	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=517595:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:129396438(-)-9:129397012(+)__9_129384501_129409501D;SPAN=574;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:47:46.4:69.5,0,46.4:0:25:-69.5:69.5
9	129410470	517627:1	A	A[Un_JTFH01001474v1_decoy:1[	7	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCAGCATCACCACCAACATCACAACCACCATCA;MAPQ=60;MATEID=517627:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=CACCAC;SCTG=c_9_129409001_129434001_82C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:56:7.8:7.8,0,96.2:9:0:-7.677:13.03
9	129435079	517695:1	T	T[9:129435408[	50	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGTCCTGT;MAPQ=60;MATEID=517695:2;MATENM=0;NM=38;NUMPARTS=3;REPSEQ=TTTTT;SCTG=c_9_129433501_129458501_42C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:45:50.3:50.3,0,50.3:17:8:-50.35:50.35
9	129435408	517695:2	G	]9:129435079]G	50	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGTCCTGT;MAPQ=60;MATEID=517695:1;MATENM=38;NM=0;NUMPARTS=3;REPSEQ=TTTTT;SCTG=c_9_129433501_129458501_42C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:45:50.3:50.3,0,50.3:17:8:-50.35:50.35
9	129864461	518089:1	C	C[9:130112446[	46	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=518089:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_130095001_130120001_5C;SPAN=247985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21
9	130112446	518089:2	C	]9:129864461]C	46	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=518089:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_130095001_130120001_5C;SPAN=247985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21
9	130197644	518152:1	A	]9:130221959]A	39	PASS	DISC_MAPQ=49;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=518152:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_130217501_130242501_98C;SPAN=24315;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:8:10:-40.41:40.41
9	130221959	518152:2	A	A[9:130197644[	39	PASS	DISC_MAPQ=40;EVDNC=ASDIS;INSERTION=T;MAPQ=0;MATEID=518152:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_130217501_130242501_98C;SPAN=24315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:8:10:-40.41:40.41
9	130268363	518192:1	C	C[9:130272523[	51	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=518192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_130266501_130291501_32C;SPAN=4160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:29:21.5:51.2,0,21.5:18:0:-51.92:51.92
9	130272523	518192:2	G	]9:130268363]G	51	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=518192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_130266501_130291501_32C;SPAN=4160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:29:21.5:51.2,0,21.5:18:0:-51.92:51.92
9	130392964	518254:2	C	C]3:11599603]	49	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTC;MAPQ=19;MATEID=518254:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_9_130389001_130414001_29C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:9:12:-49.51:49.51
9	131371843	518653:1	T	]9:131372761]T	0	PASS	EVDNC=ASSMB;HOMSEQ=TCGCCC;MAPQ=60;MATEID=518653:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_131369001_131394001_55C;SPAN=918;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:46:0.5:0.5,0,112.7:4:0:-0.2738:7.434
9	131372761	518653:2	C	C[9:131371843[	0	PASS	EVDNC=ASSMB;HOMSEQ=TCGCCC;MAPQ=60;MATEID=518653:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_131369001_131394001_55C;SPAN=918;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:46:0.5:0.5,0,112.7:4:0:-0.2738:7.434
9	132787337	519162:1	A	]9:132845611]A	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=519162:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_132839001_132864001_5C;SPAN=58274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
9	132845611	519162:2	T	T[9:132787337[	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=519162:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_132839001_132864001_5C;SPAN=58274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32
9	133548994	519435:1	T	T[9:133549304[	59	PASS	EVDNC=ASSMB;HOMSEQ=CACAGTTTCCTTCTT;MAPQ=60;MATEID=519435:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_133525001_133550001_22C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41
9	133549304	519435:2	C	]9:133548994]C	59	PASS	EVDNC=ASSMB;HOMSEQ=CACAGTTTCCTTCTT;MAPQ=60;MATEID=519435:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_133525001_133550001_22C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41
9	134394166	999384:1	G	G]Un_JTFH01000871v1_decoy:1074]	62	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACCACCATCACCAACATCATCA;MAPQ=60;MATEID=999384:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_1714_1_1074_7C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:7:5.7:62.7,5.7,0:21:0:-62.72:62.72
9	134684963	519904:1	C	]9:134685497]C	46	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=519904:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:134684963(-)-9:134685497(+)__9_134676501_134701501D;SPAN=534;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:48:46.1:46.1,0,72.5:0:18:-45.93:46.31
9	134685497	519904:2	C	C[9:134684963[	46	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=519904:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:134684963(-)-9:134685497(+)__9_134676501_134701501D;SPAN=534;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:48:46.1:46.1,0,72.5:0:18:-45.93:46.31
9	135119029	520085:1	C	]9:135119480]C	26	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CTCACTGGATCTTTGGAAGTGCTCACTGGGTCTTTGGAAGTGCTCAC;MAPQ=60;MATEID=520085:2;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_9_135117501_135142501_33C;SPAN=451;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:61:26:26,0,125:7:6:-25.77:29.63
9	135119480	520085:2	C	C[9:135119029[	26	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CTCACTGGATCTTTGGAAGTGCTCACTGGGTCTTTGGAAGTGCTCAC;MAPQ=60;MATEID=520085:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_9_135117501_135142501_33C;SPAN=451;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:61:26:26,0,125:7:6:-25.77:29.63
9	135322220	520184:1	A	A[9:135325758[	62	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=520184:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135313501_135338501_125C;SPAN=3538;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21
9	135325758	520184:2	T	]9:135322220]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=520184:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135313501_135338501_125C;SPAN=3538;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21
9	135350173	520212:1	C	]Un_KN707757v1_decoy:3034]C	17	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=520212:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135338001_135363001_35C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:7:0:-17.77:17.94
9	135350252	988641:1	T	T[Un_KN707757v1_decoy:1[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988641:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_608_1_3034_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:4:4.2:46.2,4.2,0:16:0:-46.21:46.21
9	135350252	520213:1	T	T[Un_KN707757v1_decoy:1[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=520213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135338001_135363001_41C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21
9	135587257	520316:1	C	C[9:135588354[	99	PASS	EVDNC=ASSMB;HOMSEQ=GGC;MAPQ=60;MATEID=520316:2;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_9_135583001_135608001_28C;SPAN=1097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:18:9.9:108.9,9.9,0:36:0:-108.9:108.9
9	135588354	520316:2	G	]9:135587257]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GGC;MAPQ=60;MATEID=520316:1;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_9_135583001_135608001_28C;SPAN=1097;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:18:9.9:108.9,9.9,0:36:0:-108.9:108.9
9	136772879	520714:1	A	A[9:136782783[	38	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=520714:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_136759001_136784001_89C;SPAN=9904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
9	136782783	520714:2	A	]9:136772879]A	38	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=520714:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_136759001_136784001_89C;SPAN=9904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69
9	137359057	521016:1	C	C[9:137361528[	82	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TCGATCTCCTGACCTCGT;INSERTION=GATCCGTCCGCCTCGGCCTT;MAPQ=60;MATEID=521016:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_9_137347001_137372001_0C;SPAN=2471;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:5:7.5:82.5,7.5,0:23:8:-82.52:82.52
9	137361528	521016:2	A	]9:137359057]A	82	PASS	DISC_MAPQ=46;EVDNC=TSI_G;HOMSEQ=TCGATCTCCTGACCTCGT;INSERTION=GATCCGTCCGCCTCGGCCTT;MAPQ=60;MATEID=521016:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_9_137347001_137372001_0C;SPAN=2471;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:5:7.5:82.5,7.5,0:23:8:-82.52:82.52
9	137506126	521125:1	C	]9:137559807]C	99	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=521125:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_26C;SPAN=53681;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:23:10.2:112.2,10.2,0:24:26:-112.2:112.2
9	137529033	521126:1	T	T[9:137547812[	19	PASS	EVDNC=ASSMB;HOMSEQ=CTCT;MAPQ=60;MATEID=521126:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_36C;SPAN=18779;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23
9	137546395	521158:1	C	]9:137681397]C	34	PASS	DISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=521158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137665501_137690501_62C;SPAN=135002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:9:9:-33.92:34.03
9	137547812	521126:2	C	]9:137529033]C	19	PASS	EVDNC=ASSMB;HOMSEQ=CTCT;MAPQ=60;MATEID=521126:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_36C;SPAN=18779;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23
9	137559807	521125:2	C	C[9:137506126[	99	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=521125:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_26C;SPAN=53681;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:23:10.2:112.2,10.2,0:24:26:-112.2:112.2
9	137681397	521158:2	T	T[9:137546395[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137665501_137690501_62C;SPAN=135002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:9:9:-33.92:34.03
9	137888932	521254:1	G	G[9:137890829[	57	PASS	DISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=19;MATEID=521254:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137886001_137911001_34C;SPAN=1897;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:31:17.9:57.5,0,17.9:12:10:-58.24:58.24
9	137890829	521254:2	G	]9:137888932]G	57	PASS	DISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=521254:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137886001_137911001_34C;SPAN=1897;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:31:17.9:57.5,0,17.9:12:10:-58.24:58.24
9	138145282	521500:1	G	[10:79032[G	18	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=521500:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:138145282(-)-10:79032(-)__10_73501_98501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
10	79032	521500:2	T	[9:138145282[T	18	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=521500:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:138145282(-)-10:79032(-)__10_73501_98501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
10	337269	521638:1	T	]10:337797]T	35	PASS	DISC_MAPQ=33;EVDNC=ASDIS;HOMSEQ=TGTGTGTGTG;MAPQ=60;MATEID=521638:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_318501_343501_61C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:52:35:35,0,94.4:13:2:-34.9:36.48
10	337797	521638:2	G	G[10:337269[	35	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=TGTGTGTGTG;MAPQ=33;MATEID=521638:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_318501_343501_61C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:52:35:35,0,94.4:13:2:-34.9:36.48
10	367969	521652:1	C	C[10:368184[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCTGCACAGCCCCAGGTGCCTC;MAPQ=60;MATEID=521652:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_367501_392501_24C;SPAN=215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:19:5.1:56.1,5.1,0:12:8:-56.11:56.11
10	368184	521652:2	C	]10:367969]C	56	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCTGCACAGCCCCAGGTGCCTC;MAPQ=60;MATEID=521652:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_367501_392501_24C;SPAN=215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:19:5.1:56.1,5.1,0:12:8:-56.11:56.11
10	417653	521681:1	C	C[10:418146[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCCTGTGCCTGTCGGCTCAAATAGGCCTCCCTGTCTGCCTGCG;MAPQ=16;MATEID=521681:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_416501_441501_19C;SPAN=493;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:51:33:14.1:155.1,14.1,0:49:7:-155.1:155.1
10	418146	521681:2	C	]10:417653]C	99	PASS	DISC_MAPQ=36;EVDNC=ASDIS;INSERTION=GCCTGTGCCTGTCGGCTCAAATAGGCCTCCCTGTCTGCCTGCG;MAPQ=60;MATEID=521681:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_416501_441501_19C;SPAN=493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:51:33:14.1:155.1,14.1,0:49:7:-155.1:155.1
10	846157	521947:1	A	]10:1048151]A	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521947:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_1029001_1054001_64C;SPAN=201994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:9:10:-31.74:31.78
10	1048151	521947:2	G	G[10:846157[	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521947:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_1029001_1054001_64C;SPAN=201994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:9:10:-31.74:31.78
10	1174091	522022:1	T	]10:1174299]T	8	PASS	EVDNC=ASSMB;HOMSEQ=TCAGGACAGAGATGGGTGTATGTGGTCTA;MAPQ=60;MATEID=522022:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_10_1151501_1176501_99C;SPAN=208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:75:8.6:8.6,0,180.2:9:0:-8.627:18.06
10	1174299	522022:2	A	A[10:1174091[	8	PASS	EVDNC=ASSMB;HOMSEQ=TCAGGACAGAGATGGGTGTATGTGGTCTA;MAPQ=60;MATEID=522022:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_10_1151501_1176501_99C;SPAN=208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:75:8.6:8.6,0,180.2:9:0:-8.627:18.06
10	2256296	522628:1	G	G[10:2257474[	50	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=522628:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_2254001_2279001_146C;SPAN=1178;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
10	2257474	522628:2	A	]10:2256296]A	50	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=522628:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_2254001_2279001_146C;SPAN=1178;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
10	3040693	730799:1	G	G]15:53117362]	42	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=730799:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:3040693(+)-15:53117362(+)__15_53116001_53141001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:2:3.9:42.9,3.9,0:0:14:-42.91:42.91
10	3242279	523212:1	T	]10:3242421]T	85	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTGT;MAPQ=60;MATEID=523212:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_3234001_3259001_109C;SPAN=142;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:72:85.4:85.4,0,95.3:32:0:-85.39:85.43
10	3242421	523212:2	T	T[10:3242279[	85	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTGT;MAPQ=60;MATEID=523212:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_3234001_3259001_109C;SPAN=142;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:32:72:85.4:85.4,0,95.3:32:0:-85.39:85.43
10	4247987	523750:1	T	T[10:4249489[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=523750:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:4247987(+)-10:4249489(-)__10_4238501_4263501D;SPAN=1502;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:13:14.7:161.7,14.7,0:0:53:-161.7:161.7
10	4249489	523750:2	C	]10:4247987]C	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=523750:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:4247987(+)-10:4249489(-)__10_4238501_4263501D;SPAN=1502;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:13:14.7:161.7,14.7,0:0:53:-161.7:161.7
10	4592619	523879:1	A	A[10:4592929[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAAGA;MAPQ=60;MATEID=523879:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_4581501_4606501_146C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:43:15:165,15,0:54:0:-165:165
10	4592929	523879:2	A	]10:4592619]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAAGA;MAPQ=60;MATEID=523879:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_4581501_4606501_146C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:43:15:165,15,0:54:0:-165:165
10	4666326	523910:1	T	T[10:4668331[	99	PASS	EVDNC=ASSMB;INSERTION=ATAG;MAPQ=60;MATEID=523910:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_4655001_4680001_55C;SPAN=2005;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:20:10.5:115.5,10.5,0:38:0:-115.5:115.5
10	4668331	523910:2	T	]10:4666326]T	99	PASS	EVDNC=ASSMB;INSERTION=ATAG;MAPQ=60;MATEID=523910:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_4655001_4680001_55C;SPAN=2005;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:20:10.5:115.5,10.5,0:38:0:-115.5:115.5
10	5169108	524180:1	C	[Un_JTFH01001594v1_decoy:1[C	36	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AAAGACAGCTCAGGCACAGGGGGAGGTGCGG;MAPQ=52;MATEID=524180:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=GG;SCTG=c_10_5169501_5194501_110C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:0:3.3:36.3,3.3,0:12:0:-36.31:36.31
10	5245354	524219:1	T	T[10:5251383[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAATAGTGTAAAGT;MAPQ=60;MATEID=524219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_5243001_5268001_23C;SPAN=6029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:40:4.5:108.9,4.5,0:35:0:-111.7:111.7
10	5251383	524219:2	A	]10:5245354]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAATAGTGTAAAGT;MAPQ=60;MATEID=524219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_5243001_5268001_23C;SPAN=6029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:40:4.5:108.9,4.5,0:35:0:-111.7:111.7
10	6210012	524800:1	A	A[10:6210952[	65	PASS	EVDNC=ASSMB;HOMSEQ=CCCGCCTCGGCCTCCCA;MAPQ=60;MATEID=524800:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6198501_6223501_10C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82
10	6210952	524800:2	C	]10:6210012]C	65	PASS	EVDNC=ASSMB;HOMSEQ=CCCGCCTCGGCCTCCCA;MAPQ=60;MATEID=524800:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6198501_6223501_10C;SPAN=940;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82
10	6369618	524908:1	T	T[10:6375668[	95	PASS	EVDNC=ASSMB;HOMSEQ=CAGCAAATCATTTTCCT;MAPQ=60;MATEID=524908:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_6345501_6370501_53C;SPAN=6050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94
10	6375668	524908:2	C	]10:6369618]C	95	PASS	EVDNC=ASSMB;HOMSEQ=CAGCAAATCATTTTCCT;MAPQ=60;MATEID=524908:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_6345501_6370501_53C;SPAN=6050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94
10	6894560	525248:1	A	]10:6894663]A	99	PASS	EVDNC=ASSMB;INSERTION=GCATGGTATGGAGTAGCAGTTTCCAGCATACTGCATGGTATGGAGTAGCAGTTTCA;MAPQ=60;MATEID=525248:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6884501_6909501_96C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:52:169:99:124.4,0,299.3:52:0:-124.1:128.2
10	6894663	525248:2	T	T[10:6894560[	99	PASS	EVDNC=ASSMB;INSERTION=GCATGGTATGGAGTAGCAGTTTCCAGCATACTGCATGGTATGGAGTAGCAGTTTCA;MAPQ=60;MATEID=525248:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6884501_6909501_96C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:52:169:99:124.4,0,299.3:52:0:-124.1:128.2
10	7035078	525336:1	T	T[10:7036340[	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=525336:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_7031501_7056501_19C;SPAN=1262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:26:13.5:148.5,13.5,0:49:0:-148.5:148.5
10	7036340	525336:2	C	]10:7035078]C	99	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=525336:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_7031501_7056501_19C;SPAN=1262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:26:13.5:148.5,13.5,0:49:0:-148.5:148.5
10	7526497	525537:1	T	]10:7527082]T	46	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=525537:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7526497(-)-10:7527082(+)__10_7521501_7546501D;SPAN=585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:47:46.4:46.4,0,69.5:0:18:-46.21:46.52
10	7527082	525537:2	C	C[10:7526497[	46	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=525537:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7526497(-)-10:7527082(+)__10_7521501_7546501D;SPAN=585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:47:46.4:46.4,0,69.5:0:18:-46.21:46.52
10	7751867	525705:1	G	G[10:7752076[	74	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGTAACGATG;MAPQ=60;MATEID=525705:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_7742001_7767001_8C;SPAN=209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:31:1.4:74,0,1.4:25:0:-77.51:77.51
10	7752076	525705:2	A	]10:7751867]A	74	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGTAACGATG;MAPQ=60;MATEID=525705:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_7742001_7767001_8C;SPAN=209;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:31:1.4:74,0,1.4:25:0:-77.51:77.51
10	7819172	525836:1	T	[10:7999791[T	53	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=CAATGCAGGGGCTCAGGCTGGTCAACAGAGCT;MAPQ=60;MATEID=525836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_7987001_8012001_49C;SPAN=180619;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:32:24.2:53.9,0,24.2:11:15:-54.21:54.21
10	7953950	525815:1	T	T[10:7954929[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=525815:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7953950(+)-10:7954929(-)__10_7938001_7963001D;SPAN=979;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:0:35:-105.6:105.6
10	7954929	525815:2	A	]10:7953950]A	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=525815:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7953950(+)-10:7954929(-)__10_7938001_7963001D;SPAN=979;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:0:35:-105.6:105.6
10	7998109	525843:1	T	T]10:8023057]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=525843:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7998109(+)-10:8023057(+)__10_7987001_8012001D;SPAN=24948;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
10	7999791	525836:2	T	[10:7819172[T	53	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=CAATGCAGGGGCTCAGGCTGGTCAACAGAGCT;MAPQ=60;MATEID=525836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_7987001_8012001_49C;SPAN=180619;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:32:24.2:53.9,0,24.2:11:15:-54.21:54.21
10	8023057	525843:2	T	T]10:7998109]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=525843:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7998109(+)-10:8023057(+)__10_7987001_8012001D;SPAN=24948;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
10	8436075	526239:1	A	]10:8535177]A	28	PASS	EVDNC=ASSMB;INSERTION=TAC;MAPQ=60;MATEID=526239:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_8526001_8551001_176C;SPAN=99102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58
10	8535177	526239:2	A	A[10:8436075[	28	PASS	EVDNC=ASSMB;INSERTION=TAC;MAPQ=60;MATEID=526239:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_8526001_8551001_176C;SPAN=99102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58
10	8740029	526412:1	T	T[10:8740345[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTTAGTTTTCTTT;MAPQ=60;MATEID=526412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_8722001_8747001_74C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:33:10.2:112.2,10.2,0:26:12:-112.2:112.2
10	8740345	526412:2	G	]10:8740029]G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTTAGTTTTCTTT;MAPQ=60;MATEID=526412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_8722001_8747001_74C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:33:10.2:112.2,10.2,0:26:12:-112.2:112.2
10	9081206	526682:1	A	]10:9240096]A	11	PASS	EVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=526682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_9065001_9090001_1C;SPAN=158890;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:43:11:11,0,96.8:7:0:-11.02:15.04
10	9240096	526682:2	A	A[10:9081206[	11	PASS	EVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=526682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_9065001_9090001_1C;SPAN=158890;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:43:11:11,0,96.8:7:0:-11.02:15.04
10	11283839	527473:1	A	]10:11284626]A	32	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=527473:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:11283839(-)-10:11284626(+)__10_11270001_11295001D;SPAN=787;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:50:32.3:32.3,0,91.7:0:14:-32.16:33.83
10	11284626	527473:2	A	A[10:11283839[	32	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=527473:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:11283839(-)-10:11284626(+)__10_11270001_11295001D;SPAN=787;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:50:32.3:32.3,0,91.7:0:14:-32.16:33.83
10	11903434	527787:1	C	C[10:11903772[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=527787:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_11882501_11907501_27C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:27:8.4:92.4,8.4,0:24:9:-92.42:92.42
10	11903772	527787:2	G	]10:11903434]G	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=527787:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_11882501_11907501_27C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:27:8.4:92.4,8.4,0:24:9:-92.42:92.42
10	12518474	528136:1	T	T[10:12520975[	56	PASS	EVDNC=ASSMB;HOMSEQ=CTTTATTCATTCTT;MAPQ=60;MATEID=528136:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_10_12519501_12544501_2C;SPAN=2501;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11
10	12520975	528136:2	C	]10:12518474]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CTTTATTCATTCTT;MAPQ=60;MATEID=528136:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_10_12519501_12544501_2C;SPAN=2501;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11
10	13490359	528682:1	T	]10:13613251]T	52	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=528682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_13597501_13622501_37C;SPAN=122892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39
10	13613251	528682:2	G	G[10:13490359[	52	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=528682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_13597501_13622501_37C;SPAN=122892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39
10	15915313	96983:2	A	]2:90371363]A	92	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTTTTTTTTA;MAPQ=60;MATEID=96983:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_90356001_90381001_107C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:81:92.9:92.9,0,109.4:27:14:-92.77:92.86
10	18214147	530576:1	A	A[10:18214661[	40	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=530576:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_18203501_18228501_20C;SPAN=514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
10	18214661	530576:2	A	]10:18214147]A	40	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=530576:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_18203501_18228501_20C;SPAN=514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63
10	19116995	530955:1	T	]10:19211610]T	39	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TGAGGCAGGATAATCGCTTGAACC;MAPQ=60;MATEID=530955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_19208001_19233001_99C;SPAN=94615;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:9:3:-39.28:39.28
10	19211610	530955:2	C	C[10:19116995[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAGGCAGGATAATCGCTTGAACC;MAPQ=60;MATEID=530955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_19208001_19233001_99C;SPAN=94615;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:9:3:-39.28:39.28
10	19321258	531031:1	T	T[10:19362086[	20	PASS	EVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=531031:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_19355001_19380001_8C;SPAN=40828;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
10	19362086	531031:2	A	]10:19321258]A	20	PASS	EVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=531031:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_19355001_19380001_8C;SPAN=40828;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
10	19707705	531188:1	T	T[10:19709146[	30	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=531188:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:19707705(+)-10:19709146(-)__10_19698001_19723001D;SPAN=1441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
10	19709146	531188:2	C	]10:19707705]C	30	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=531188:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:19707705(+)-10:19709146(-)__10_19698001_19723001D;SPAN=1441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
10	20378330	531455:1	G	G[10:20378637[	72	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATTAGTAAG;MAPQ=60;MATEID=531455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_20359501_20384501_59C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
10	20378637	531455:2	A	]10:20378330]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATTAGTAAG;MAPQ=60;MATEID=531455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_20359501_20384501_59C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62
10	21689372	531851:1	T	]10:21772706]T	28	PASS	EVDNC=ASSMB;HOMSEQ=TTTC;MAPQ=60;MATEID=531851:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_21756001_21781001_41C;SPAN=83334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
10	21717820	52839:2	C	[1:197544937[C	49	PASS	DISC_MAPQ=0;EVDNC=TSI_L;INSERTION=CCCTTCTCC;MAPQ=53;MATEID=52839:1;MATENM=14;NM=0;NUMPARTS=3;REPSEQ=CC;SCTG=c_1_197543501_197568501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:8:4.5:49.5,4.5,0:15:9:-49.51:49.51
10	21772706	531851:2	C	C[10:21689372[	28	PASS	EVDNC=ASSMB;HOMSEQ=TTTC;MAPQ=60;MATEID=531851:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_21756001_21781001_41C;SPAN=83334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
10	25203596	532849:1	C	C[10:25204023[	89	PASS	DISC_MAPQ=46;EVDNC=ASDIS;INSERTION=A;MAPQ=43;MATEID=532849:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_25186001_25211001_27C;SPAN=427;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:29:8.1:89.1,8.1,0:22:12:-89.12:89.12
10	25204023	532849:2	T	]10:25203596]T	89	PASS	DISC_MAPQ=40;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=532849:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_25186001_25211001_27C;SPAN=427;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:29:8.1:89.1,8.1,0:22:12:-89.12:89.12
10	26065838	533215:1	C	C[10:26066145[	21	PASS	EVDNC=ASSMB;HOMSEQ=GAGCAGTGGGC;MAPQ=60;MATEID=533215:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_26043501_26068501_3C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
10	26066145	533215:2	G	]10:26065838]G	21	PASS	EVDNC=ASSMB;HOMSEQ=GAGCAGTGGGC;MAPQ=60;MATEID=533215:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_26043501_26068501_3C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
10	26710119	533592:1	A	A[10:26713225[	92	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGGTTGCAGTGAGCCGAGATCACGCCATTGCA;MAPQ=60;MATEID=533592:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_26705001_26730001_95C;SPAN=3106;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:20:17:-92.42:92.42
10	26713225	533592:2	G	]10:26710119]G	92	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GAGGTTGCAGTGAGCCGAGATCACGCCATTGCA;MAPQ=60;MATEID=533592:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_26705001_26730001_95C;SPAN=3106;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:20:17:-92.42:92.42
10	26935274	533742:1	A	A[10:26939157[	32	PASS	EVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=533742:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_26925501_26950501_46C;SPAN=3883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:51:32:32,0,94.7:14:0:-31.88:33.69
10	26935698	533746:1	T	]10:26940472]T	20	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=533746:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:26935698(-)-10:26940472(+)__10_26925501_26950501D;SPAN=4774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:0:10:-20.36:23
10	26939157	533742:2	A	]10:26935274]A	32	PASS	EVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=533742:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_26925501_26950501_46C;SPAN=3883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:51:32:32,0,94.7:14:0:-31.88:33.69
10	26940472	533746:2	T	T[10:26935698[	20	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=533746:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:26935698(-)-10:26940472(+)__10_26925501_26950501D;SPAN=4774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:45:20.3:20.3,0,92.9:0:10:-20.36:23
10	30957818	535680:1	A	A[10:30962841[	64	PASS	EVDNC=ASSMB;INSERTION=TGTTCAA;MAPQ=60;MATEID=535680:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_30943501_30968501_17C;SPAN=5023;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69
10	30962841	535680:2	C	]10:30957818]C	64	PASS	EVDNC=ASSMB;INSERTION=TGTTCAA;MAPQ=60;MATEID=535680:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_30943501_30968501_17C;SPAN=5023;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69
10	31154439	535744:1	G	G[10:31155936[	44	PASS	EVDNC=ASSMB;HOMSEQ=TTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=535744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31139501_31164501_12C;SPAN=1497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
10	31155936	535744:2	T	]10:31154439]T	44	PASS	EVDNC=ASSMB;HOMSEQ=TTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=535744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31139501_31164501_12C;SPAN=1497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
10	31687153	535880:1	T	]10:31687467]T	14	PASS	DISC_MAPQ=4;EVDNC=TSI_L;HOMSEQ=TATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATGTATATATTTATATATACATTATTTATATATAAATATATATTTATATATACATTATATATAAATATATATTTATATATA;INSERTION=ATT;MAPQ=60;MATEID=535880:2;MATENM=29;NM=0;NUMPARTS=5;REPSEQ=ATATAT;SCTG=c_10_31678501_31703501_4C;SPAN=314;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:14.5:14.5,0,27.5:7:2:-14.35:14.66
10	31687467	535880:2	T	T[10:31687153[	14	PASS	DISC_MAPQ=15;EVDNC=TSI_L;HOMSEQ=TATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATGTATATATTTATATATACATTATTTATATATAAATATATATTTATATATACATTATATATAAATATATATTTATATATA;INSERTION=ATT;MAPQ=24;MATEID=535880:1;MATENM=0;NM=29;NUMPARTS=5;REPSEQ=ATATAT;SCTG=c_10_31678501_31703501_4C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:23:14.5:14.5,0,27.5:7:2:-14.35:14.66
10	31968967	535994:1	G	G[10:31971685[	54	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATATTAGTTG;MAPQ=60;MATEID=535994:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31948001_31973001_30C;SPAN=2718;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:31:21.2:54.2,0,21.2:19:0:-54.63:54.63
10	31971685	535994:2	A	]10:31968967]A	54	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGATATTAGTTG;MAPQ=60;MATEID=535994:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31948001_31973001_30C;SPAN=2718;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:31:21.2:54.2,0,21.2:19:0:-54.63:54.63
10	32416809	536235:1	C	C[10:32417137[	99	PASS	EVDNC=ASSMB;HOMSEQ=ATATTCTATTC;MAPQ=60;MATEID=536235:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_32413501_32438501_52C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:25:12.6:138.6,12.6,0:46:0:-138.6:138.6
10	32417137	536235:2	A	]10:32416809]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ATATTCTATTC;MAPQ=60;MATEID=536235:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_32413501_32438501_52C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:25:12.6:138.6,12.6,0:46:0:-138.6:138.6
10	33095434	536439:1	C	]10:33095535]C	54	PASS	EVDNC=ASSMB;INSERTION=ATCA;MAPQ=60;MATEID=536439:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33075001_33100001_34C;SPAN=101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:54:54.2:54.2,0,80.6:21:0:-54.14:54.45
10	33095535	536439:2	T	T[10:33095434[	54	PASS	EVDNC=ASSMB;INSERTION=ATCA;MAPQ=60;MATEID=536439:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33075001_33100001_34C;SPAN=101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:54:54.2:54.2,0,80.6:21:0:-54.14:54.45
10	33203726	536476:1	T	T[10:33204002[	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAAAGACTGCTTTT;MAPQ=60;MATEID=536476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33197501_33222501_7C;SPAN=276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:31:8.7:95.7,8.7,0:27:7:-95.72:95.72
10	33204002	536476:2	C	]10:33203726]C	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAAAGACTGCTTTT;MAPQ=60;MATEID=536476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33197501_33222501_7C;SPAN=276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:31:8.7:95.7,8.7,0:27:7:-95.72:95.72
10	34395555	536911:1	C	C[10:34395866[	62	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAACATCATC;MAPQ=60;MATEID=536911:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_34373501_34398501_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68
10	34395866	536911:2	A	]10:34395555]A	62	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAACATCATC;MAPQ=60;MATEID=536911:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_34373501_34398501_34C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68
10	35304294	537250:1	A	A[10:35304609[	49	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTTTCTCCTTTTA;MAPQ=60;MATEID=537250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35304501_35329501_29C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:14:4.5:49.5,4.5,0:17:0:-49.51:49.51
10	35304609	537250:2	C	]10:35304294]C	49	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTTTCTCCTTTTA;MAPQ=60;MATEID=537250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35304501_35329501_29C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:14:4.5:49.5,4.5,0:17:0:-49.51:49.51
10	35610837	537317:1	T	]Un_JTFH01000337v1_decoy:2001]T	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=537317:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35598501_35623501_83C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
10	35859514	537512:1	A	[10:36013231[A	52	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=537512:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:35859514(-)-10:36013231(-)__10_35990501_36015501D;SPAN=153717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:0:4.8:52.8,4.8,0:0:18:-52.81:52.81
10	35930733	537494:1	G	G[10:35932139[	51	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=537494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35917001_35942001_35C;SPAN=1406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
10	35932139	537494:2	T	]10:35930733]T	51	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=537494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35917001_35942001_35C;SPAN=1406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
10	36013231	537512:2	T	[10:35859514[T	52	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=537512:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:35859514(-)-10:36013231(-)__10_35990501_36015501D;SPAN=153717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:0:4.8:52.8,4.8,0:0:18:-52.81:52.81
10	38527620	539220:1	A	A[10:38529793[	0	PASS	EVDNC=ASSMB;HOMSEQ=AATGGAATGGAATGGAATGGA;MAPQ=60;MATEID=539220:2;MATENM=3;NM=1;NUMPARTS=3;SCTG=c_10_38514001_38539001_669C;SPAN=2173;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:485:89.7:0,89.7,1400:14:0:90.12:19.18
10	38529793	539220:2	A	]10:38527620]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AATGGAATGGAATGGAATGGA;MAPQ=60;MATEID=539220:1;MATENM=1;NM=3;NUMPARTS=3;SCTG=c_10_38514001_38539001_669C;SPAN=2173;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:14:485:89.7:0,89.7,1400:14:0:90.12:19.18
10	38950967	541640:2	T	T]7:65499251]	27	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=541640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65499251(+)-10:38950967(+)__10_38930501_38955501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:33:27.2:27.2,0,53.6:0:11:-27.04:27.59
10	39173961	541890:1	A	A[10:39175116[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAAACTGCTTTGTGATGTGAGCATTCATCTCACAGA;MAPQ=60;MATEID=541890:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_39151001_39176001_60C;SPAN=1155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:30:8.4:92.4,8.4,0:17:16:-92.42:92.42
10	39175116	541890:2	T	]10:39173961]T	92	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAAACTGCTTTGTGATGTGAGCATTCATCTCACAGA;MAPQ=60;MATEID=541890:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_39151001_39176001_60C;SPAN=1155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:30:8.4:92.4,8.4,0:17:16:-92.42:92.42
10	39347363	542023:1	A	A[10:39347685[	85	PASS	EVDNC=ASSMB;HOMSEQ=AAATATCCCTTTGCAGATTCTA;MAPQ=60;MATEID=542023:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_39322501_39347501_49C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:28:0:-85.82:85.82
10	39347685	542023:2	A	]10:39347363]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AAATATCCCTTTGCAGATTCTA;MAPQ=60;MATEID=542023:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_39322501_39347501_49C;SPAN=322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:28:0:-85.82:85.82
10	39406263	542069:1	T	T[10:39413843[	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTGAATCTTTCTTTTGATT;MAPQ=60;MATEID=542069:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_10_39396001_39421001_58C;SPAN=7580;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:39:12.2:84.8,0,12.2:13:17:-87.73:87.73
10	39413843	542069:2	T	]10:39406263]T	84	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TGAGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTGAATCTTTCTTTTGATT;MAPQ=60;MATEID=542069:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_10_39396001_39421001_58C;SPAN=7580;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:39:12.2:84.8,0,12.2:13:17:-87.73:87.73
10	39454303	542169:1	C	C[10:39454773[	73	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TTCTGAGAATGCTTCTGTGTAGTTTTTATGTGAAGATATTTCCTTTTC;MAPQ=59;MATEID=542169:2;MATENM=8;NM=1;NUMPARTS=3;SCTG=c_10_39445001_39470001_61C;SPAN=470;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:33:7.4:73.4,0,7.4:19:6:-76.04:76.04
10	39454773	542169:2	T	]10:39454303]T	73	PASS	DISC_MAPQ=20;EVDNC=TSI_L;HOMSEQ=TTCTGAGAATGCTTCTGTGTAGTTTTTATGTGAAGATATTTCCTTTTC;MAPQ=21;MATEID=542169:1;MATENM=1;NM=8;NUMPARTS=3;SCTG=c_10_39445001_39470001_61C;SPAN=470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:33:7.4:73.4,0,7.4:19:6:-76.04:76.04
10	39496326	869771:1	C	]20:28835228]C	22	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=869771:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39496326(-)-20:28835228(+)__20_28812001_28837001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25
10	39517954	542365:1	G	G[10:39523152[	17	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=542365:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39517954(+)-10:39523152(-)__10_39518501_39543501D;SPAN=5198;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
10	39523152	542365:2	T	]10:39517954]T	17	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=542365:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39517954(+)-10:39523152(-)__10_39518501_39543501D;SPAN=5198;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
10	39561377	543316:1	T	]10:41708970]T	19	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=543316:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561377(-)-10:41708970(+)__10_41699001_41724001D;SPAN=2147593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
10	39561422	542533:1	C	]10:39900386]C	36	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=542533:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561422(-)-10:39900386(+)__10_39886001_39911001D;SPAN=338964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
10	39570652	543048:1	T	T[10:41469918[	46	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGAAT;MAPQ=53;MATEID=543048:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_41454001_41479001_291C;SPAN=1899266;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:10:9:-46.21:46.21
10	39575131	542465:1	C	C[10:39576801[	30	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=542465:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39575131(+)-10:39576801(-)__10_39567501_39592501D;SPAN=1670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:185:30.7:30.7,0,433.4:0:25:-30.52:51.53
10	39576801	542465:2	A	]10:39575131]A	30	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=542465:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39575131(+)-10:39576801(-)__10_39567501_39592501D;SPAN=1670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:185:30.7:30.7,0,433.4:0:25:-30.52:51.53
10	39580940	542869:1	T	T[10:41034331[	59	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=542869:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39580940(+)-10:41034331(-)__10_41013001_41038001D;SPAN=1453391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41
10	39758629	542522:1	G	G[10:39844905[	27	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=542522:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39758629(+)-10:39844905(-)__10_39837001_39862001D;SPAN=86276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:0:11:-27.32:27.77
10	39844905	542522:2	T	]10:39758629]T	27	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=542522:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39758629(+)-10:39844905(-)__10_39837001_39862001D;SPAN=86276;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:0:11:-27.32:27.77
10	39900386	542533:2	A	A[10:39561422[	36	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=542533:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561422(-)-10:39900386(+)__10_39886001_39911001D;SPAN=338964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
10	39940223	542923:1	C	]10:41121404]C	26	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=542923:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39940223(-)-10:41121404(+)__10_41111001_41136001D;SPAN=1181181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7
10	39944712	542980:1	T	T[10:41274581[	99	PASS	DISC_MAPQ=41;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCTTTGTGTTGTGTGTATTCAACTCACAGATTTGAACCTT;MAPQ=60;MATEID=542980:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_41258001_41283001_111C;SPAN=1329869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:3:9.3:102.3,9.3,0:11:25:-102.3:102.3
10	39956209	542664:1	C	C[10:40398600[	24	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=542664:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39956209(+)-10:40398600(-)__10_40376001_40401001D;SPAN=442391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:54:24.5:24.5,0,110.3:0:12:-24.43:27.6
10	40398600	542664:2	T	]10:39956209]T	24	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=542664:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39956209(+)-10:40398600(-)__10_40376001_40401001D;SPAN=442391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:54:24.5:24.5,0,110.3:0:12:-24.43:27.6
10	40616286	542749:1	G	G[10:41514088[	36	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=542749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:40616286(+)-10:41514088(-)__10_40596501_40621501D;SPAN=897802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
10	41034331	542869:2	G	]10:39580940]G	59	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=542869:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39580940(+)-10:41034331(-)__10_41013001_41038001D;SPAN=1453391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41
10	41121404	542923:2	G	G[10:39940223[	26	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=542923:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39940223(-)-10:41121404(+)__10_41111001_41136001D;SPAN=1181181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7
10	41274581	542980:2	C	]10:39944712]C	99	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCTTTGTGTTGTGTGTATTCAACTCACAGATTTGAACCTT;MAPQ=60;MATEID=542980:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_41258001_41283001_111C;SPAN=1329869;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:3:9.3:102.3,9.3,0:11:25:-102.3:102.3
10	41275126	543061:1	T	T[10:41461934[	39	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=543061:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41275126(+)-10:41461934(-)__10_41454001_41479001D;SPAN=186808;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41
10	41310093	543068:1	C	C[10:41481615[	46	PASS	DISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=ATGGAAATATCTTCGTGTAAAAACTACACAGAATCATTC;MAPQ=60;MATEID=543068:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_41478501_41503501_170C;SPAN=171522;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:5:13:-46.21:46.21
10	41461934	543061:2	G	]10:41275126]G	39	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=543061:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41275126(+)-10:41461934(-)__10_41454001_41479001D;SPAN=186808;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41
10	41469918	543048:2	T	]10:39570652]T	46	PASS	DISC_MAPQ=33;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGAAT;MAPQ=53;MATEID=543048:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_41454001_41479001_291C;SPAN=1899266;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:10:9:-46.21:46.21
10	41481615	543068:2	A	]10:41310093]A	46	PASS	DISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=ATGGAAATATCTTCGTGTAAAAACTACACAGAATCATTC;MAPQ=60;MATEID=543068:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_41478501_41503501_170C;SPAN=171522;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:5:13:-46.21:46.21
10	41498909	543111:1	T	T[10:41531348[	9	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=543111:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41498909(+)-10:41531348(-)__10_41527501_41552501D;SPAN=32439;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5
10	41514088	542749:2	G	]10:40616286]G	36	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=542749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:40616286(+)-10:41514088(-)__10_40596501_40621501D;SPAN=897802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
10	41531348	543111:2	A	]10:41498909]A	9	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=543111:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41498909(+)-10:41531348(-)__10_41527501_41552501D;SPAN=32439;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5
10	41550926	543141:1	C	C[10:41582440[	36	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=543141:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41550926(+)-10:41582440(-)__10_41527501_41552501D;SPAN=31514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
10	41578760	543295:1	T	]10:41580449]T	32	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=543295:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41578760(-)-10:41580449(+)__10_41576501_41601501D;SPAN=1689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:48:32.9:32.9,0,85.7:0:14:-32.72:34.13
10	41580449	543295:2	G	G[10:41578760[	32	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=543295:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41578760(-)-10:41580449(+)__10_41576501_41601501D;SPAN=1689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:48:32.9:32.9,0,85.7:0:14:-32.72:34.13
10	41582440	543141:2	G	]10:41550926]G	36	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=543141:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41550926(+)-10:41582440(-)__10_41527501_41552501D;SPAN=31514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
10	41708970	543316:2	A	A[10:39561377[	19	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=543316:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561377(-)-10:41708970(+)__10_41699001_41724001D;SPAN=2147593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
10	42100210	543677:1	A	A[10:42100795[	86	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=GAATGGACTCGAATGGA;MAPQ=60;MATEID=543677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_42091001_42116001_352C;SPAN=585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:45:26.9:86.3,0,26.9:26:5:-88.1:88.1
10	42100795	543677:2	G	]10:42100210]G	86	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=GAATGGACTCGAATGGA;MAPQ=60;MATEID=543677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_42091001_42116001_352C;SPAN=585;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:45:26.9:86.3,0,26.9:26:5:-88.1:88.1
10	42102314	543686:1	G	]10:42103670]G	0	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=543686:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:42102314(-)-10:42103670(+)__10_42091001_42116001D;SPAN=1356;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:102:2.1:0,2.1,260.7:0:8:2.263:14.5
10	42103670	543686:2	A	A[10:42102314[	0	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=543686:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:42102314(-)-10:42103670(+)__10_42091001_42116001D;SPAN=1356;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:102:2.1:0,2.1,260.7:0:8:2.263:14.5
10	43261053	544893:1	C	]10:43394966]C	10	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CG;MAPQ=60;MATEID=544893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_43389501_43414501_79C;SPAN=133913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:21:10.7:10.7,0,40.4:2:5:-10.6:11.67
10	43394966	544893:2	G	G[10:43261053[	10	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CG;MAPQ=60;MATEID=544893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_43389501_43414501_79C;SPAN=133913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:21:10.7:10.7,0,40.4:2:5:-10.6:11.67
10	44405861	545285:1	G	G[10:44406159[	85	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CATGTATGTTT;MAPQ=60;MATEID=545285:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_44394001_44419001_86C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:19:10:-85.82:85.82
10	44406159	545285:2	A	]10:44405861]A	85	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CATGTATGTTT;MAPQ=60;MATEID=545285:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_44394001_44419001_86C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:10:7.8:85.8,7.8,0:19:10:-85.82:85.82
10	44927494	545384:1	C	]10:44928688]C	53	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=545384:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_69C;SPAN=1194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66
10	44927779	545385:1	T	T[10:44928703[	24	PASS	EVDNC=ASSMB;INSERTION=AGTCA;MAPQ=60;MATEID=545385:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_44908501_44933501_67C;SPAN=924;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:41:24.8:24.8,0,77.6:11:0:-24.79:26.34
10	44928688	545384:2	A	A[10:44927494[	53	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=545384:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_69C;SPAN=1194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66
10	44928703	545385:2	C	]10:44927779]C	24	PASS	EVDNC=ASSMB;INSERTION=AGTCA;MAPQ=60;MATEID=545385:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_67C;SPAN=924;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:41:24.8:24.8,0,77.6:11:0:-24.79:26.34
10	46106667	545817:1	A	]10:46283237]A	72	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=545817:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:46106667(-)-10:46283237(+)__10_46280501_46305501D;SPAN=176570;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62
10	46283237	545817:2	C	C[10:46106667[	72	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=545817:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:46106667(-)-10:46283237(+)__10_46280501_46305501D;SPAN=176570;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62
10	49470491	546800:1	T	]10:49497474]T	23	PASS	EVDNC=ASSMB;INSERTION=CACA;MAPQ=60;MATEID=546800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_49490001_49515001_5C;SPAN=26983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
10	49497474	546800:2	T	T[10:49470491[	23	PASS	EVDNC=ASSMB;INSERTION=CACA;MAPQ=60;MATEID=546800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_49490001_49515001_5C;SPAN=26983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
10	49795424	546900:1	T	T[10:49803011[	30	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=546900:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:49795424(+)-10:49803011(-)__10_49784001_49809001D;SPAN=7587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
10	49803011	546900:2	A	]10:49795424]A	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=546900:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:49795424(+)-10:49803011(-)__10_49784001_49809001D;SPAN=7587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
10	50043661	546988:1	G	[10:50135654[G	18	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=546988:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50043661(-)-10:50135654(-)__10_50029001_50054001D;SPAN=91993;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
10	50135654	546988:2	T	[10:50043661[T	18	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=546988:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50043661(-)-10:50135654(-)__10_50029001_50054001D;SPAN=91993;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
10	50149982	547039:1	G	G[10:50151355[	99	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=547039:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50149982(+)-10:50151355(-)__10_50151501_50176501D;SPAN=1373;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:0:9.3:102.3,9.3,0:0:34:-102.3:102.3
10	50151355	547039:2	C	]10:50149982]C	99	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=547039:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50149982(+)-10:50151355(-)__10_50151501_50176501D;SPAN=1373;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:0:9.3:102.3,9.3,0:0:34:-102.3:102.3
10	51132282	547341:1	C	]10:51156594]C	24	PASS	EVDNC=ASSMB;INSERTION=AATTTCT;MAPQ=60;MATEID=547341:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_51156001_51181001_2C;SPAN=24312;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74
10	51156594	547341:2	T	T[10:51132282[	24	PASS	EVDNC=ASSMB;INSERTION=AATTTCT;MAPQ=60;MATEID=547341:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_51156001_51181001_2C;SPAN=24312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74
10	51384972	547381:1	A	A[10:51385914[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GG;MAPQ=60;MATEID=547381:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_51376501_51401501_2C;SPAN=942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:36:36.2:36.2,0,52.7:11:6:-36.1:36.3
10	51385914	547381:2	T	]10:51384972]T	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GG;MAPQ=60;MATEID=547381:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_51376501_51401501_2C;SPAN=942;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:36:36.2:36.2,0,52.7:11:6:-36.1:36.3
10	53023898	547993:1	C	C[10:53029069[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=547993:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53023898(+)-10:53029069(-)__10_53018001_53043001D;SPAN=5171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5
10	53029069	547993:2	C	]10:53023898]C	99	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=547993:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53023898(+)-10:53029069(-)__10_53018001_53043001D;SPAN=5171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5
10	53101060	548047:1	C	C[10:53101370[	43	PASS	EVDNC=ASSMB;HOMSEQ=CCCGATTTTC;MAPQ=60;MATEID=548047:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53091501_53116501_84C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
10	53101370	548047:2	C	]10:53101060]C	43	PASS	EVDNC=ASSMB;HOMSEQ=CCCGATTTTC;MAPQ=60;MATEID=548047:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53091501_53116501_84C;SPAN=310;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26
10	53220202	548132:1	A	A]10:53221322]	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=548132:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53214001_53239001_57C;SPAN=1120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:44:20.6:20.6,0,89.9:5:6:-20.64:23.11
10	53221322	548132:2	T	T]10:53220202]	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=548132:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53214001_53239001_57C;SPAN=1120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:44:20.6:20.6,0,89.9:5:6:-20.64:23.11
10	53531687	575098:1	G	]11:8406229]G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=575098:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53531687(-)-11:8406229(+)__11_8403501_8428501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
10	54686224	548789:1	T	]10:54709840]T	36	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=548789:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54708501_54733501_50C;SPAN=23616;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31
10	54709840	548789:2	T	T[10:54686224[	36	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=548789:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54708501_54733501_50C;SPAN=23616;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31
10	54757278	548830:1	T	T[10:54757581[	23	PASS	EVDNC=ASSMB;HOMSEQ=AATTCTACCTT;MAPQ=60;MATEID=548830:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_54757501_54782501_28C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:8:0:-24.05:24.05
10	54757581	548830:2	A	]10:54757278]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AATTCTACCTT;MAPQ=60;MATEID=548830:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_54757501_54782501_28C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:8:0:-24.05:24.05
10	54923020	548895:1	C	C[10:54924599[	49	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=548895:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54904501_54929501_54C;SPAN=1579;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
10	54924599	548895:2	G	]10:54923020]G	49	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=548895:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54904501_54929501_54C;SPAN=1579;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
10	56786728	988246:1	T	[Un_KN707707v1_decoy:1[T	52	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988246:2;MATENM=0;NM=0;NUMPARTS=13;REPSEQ=AA;SCTG=c_558_1_4339_0C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81
10	57255466	549907:1	T	T[10:57255800[	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATCATTCTT;MAPQ=60;MATEID=549907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57232001_57257001_133C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:4:6:-13.2:17.36
10	57255800	549907:2	A	]10:57255466]A	13	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=ATCATTCTT;MAPQ=60;MATEID=549907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57232001_57257001_133C;SPAN=334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:4:6:-13.2:17.36
10	57450027	549945:1	G	G[10:57452094[	47	PASS	EVDNC=ASSMB;INSERTION=GTTAAAGATCAATC;MAPQ=60;MATEID=549945:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57428001_57453001_8C;SPAN=2067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
10	57452094	549945:2	T	]10:57450027]T	47	PASS	EVDNC=ASSMB;INSERTION=GTTAAAGATCAATC;MAPQ=60;MATEID=549945:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57428001_57453001_8C;SPAN=2067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
10	57497185	549966:1	T	T[10:57498224[	92	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATT;INSERTION=CATTTCTTTTTTCTTATCATTTTTTTCTTTGTCAACTATTTGATGACATCTCCAAACATCACCTTTTATTCATGACAGGAGTAGGGTATCATAGTAAAGAACACTGTTAATATAATCCAGATCCTTCACCACCTTCTGAAATATAGAGGAGCTTTAAGACTATGTTTGTTTTTCCTTGTATTTGCAGAAATAGCATGAGCTTTGTTTAAAGTCAGGCATCTAAAACCTTGCCCTGTATGTATTGACAAACTACACAAAATTTGTGATCTAT;MAPQ=60;MATEID=549966:2;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_10_57477001_57502001_26C;SPAN=1039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:18:8.4:92.4,8.4,0:31:0:-92.42:92.42
10	57497238	549967:1	G	G]10:57498228]	49	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=549967:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:57497238(+)-10:57498228(+)__10_57477001_57502001D;SPAN=990;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:0:17:-49.51:49.51
10	57497899	549968:1	A	[10:57498224[A	49	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATT;MAPQ=60;MATEID=549968:2;MATENM=2;NM=3;NUMPARTS=3;REPSEQ=TT;SCTG=c_10_57477001_57502001_26C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74
10	57498224	549968:2	A	[10:57497899[A	49	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATT;MAPQ=60;MATEID=549968:1;MATENM=3;NM=2;NUMPARTS=3;REPSEQ=TT;SCTG=c_10_57477001_57502001_26C;SPAN=325;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74
10	57498224	549966:2	A	]10:57497185]A	92	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATT;INSERTION=CATTTCTTTTTTCTTATCATTTTTTTCTTTGTCAACTATTTGATGACATCTCCAAACATCACCTTTTATTCATGACAGGAGTAGGGTATCATAGTAAAGAACACTGTTAATATAATCCAGATCCTTCACCACCTTCTGAAATATAGAGGAGCTTTAAGACTATGTTTGTTTTTCCTTGTATTTGCAGAAATAGCATGAGCTTTGTTTAAAGTCAGGCATCTAAAACCTTGCCCTGTATGTATTGACAAACTACACAAAATTTGTGATCTAT;MAPQ=60;MATEID=549966:1;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_10_57477001_57502001_26C;SPAN=1039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:18:8.4:92.4,8.4,0:31:0:-92.42:92.42
10	57498228	549967:2	T	T]10:57497238]	49	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=549967:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:57497238(+)-10:57498228(+)__10_57477001_57502001D;SPAN=990;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:0:17:-49.51:49.51
10	61983869	551468:1	T	T[10:61984034[	28	PASS	EVDNC=ASSMB;HOMSEQ=CCCCTTTTGTTCTT;MAPQ=60;MATEID=551468:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_61960501_61985501_50C;SPAN=165;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58
10	61984034	551468:2	C	]10:61983869]C	28	PASS	EVDNC=ASSMB;HOMSEQ=CCCCTTTTGTTCTT;MAPQ=60;MATEID=551468:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_61960501_61985501_50C;SPAN=165;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58
10	62238624	551625:1	T	]10:62396244]T	33	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=551625:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_62377001_62402001_11C;SPAN=157620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
10	62396244	551625:2	G	G[10:62238624[	33	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=551625:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_62377001_62402001_11C;SPAN=157620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
10	64639017	552403:1	A	A[10:64640988[	32	PASS	EVDNC=ASSMB;HOMSEQ=GATA;MAPQ=60;MATEID=552403:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_64631001_64656001_38C;SPAN=1971;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
10	64640988	552403:2	G	]10:64639017]G	32	PASS	EVDNC=ASSMB;HOMSEQ=GATA;MAPQ=60;MATEID=552403:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_64631001_64656001_38C;SPAN=1971;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
10	68482435	554180:1	A	]10:69420212]A	21	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=554180:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_69408501_69433501_55C;SPAN=937777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
10	68512353	553754:1	A	A[10:68512662[	33	PASS	EVDNC=ASSMB;HOMSEQ=AAAGATAAATGATA;MAPQ=60;MATEID=553754:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_68502001_68527001_136C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92
10	68512662	553754:2	A	]10:68512353]A	33	PASS	EVDNC=ASSMB;HOMSEQ=AAAGATAAATGATA;MAPQ=60;MATEID=553754:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_68502001_68527001_136C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92
10	69026605	553996:1	C	C[10:69027557[	43	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=553996:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_69016501_69041501_87C;SPAN=952;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8
10	69027557	553996:2	C	]10:69026605]C	43	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=553996:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_69016501_69041501_87C;SPAN=952;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8
10	69238368	554126:1	C	C[10:69238679[	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCAGGTATTTTC;MAPQ=60;MATEID=554126:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_69237001_69262001_24C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:27:4.2:75.9,4.2,0:15:10:-77.11:77.11
10	69238679	554126:2	A	]10:69238368]A	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCAGGTATTTTC;MAPQ=60;MATEID=554126:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_69237001_69262001_24C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:27:4.2:75.9,4.2,0:15:10:-77.11:77.11
10	69420212	554180:2	T	T[10:68482435[	21	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=554180:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_69408501_69433501_55C;SPAN=937777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
10	72713928	555235:1	T	T[10:72716457[	29	PASS	EVDNC=ASSMB;INSERTION=CTTT;MAPQ=60;MATEID=555235:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_72716001_72741001_7C;SPAN=2529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08
10	72716457	555235:2	T	]10:72713928]T	29	PASS	EVDNC=ASSMB;INSERTION=CTTT;MAPQ=60;MATEID=555235:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_72716001_72741001_7C;SPAN=2529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08
10	73082850	555296:1	T	T[10:73083075[	23	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=555296:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_73059001_73084001_2C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
10	73083075	555296:2	T	]10:73082850]T	23	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=555296:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_73059001_73084001_2C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
10	76003922	556020:1	C	]10:76080167]C	27	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=556020:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_76072501_76097501_30C;SPAN=76245;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
10	76080167	556020:2	T	T[10:76003922[	27	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=556020:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_76072501_76097501_30C;SPAN=76245;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41
10	76495938	556119:1	T	T[10:76501261[	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556119:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76495938(+)-10:76501261(-)__10_76489001_76514001D;SPAN=5323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92
10	76501261	556119:2	A	]10:76495938]A	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556119:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76495938(+)-10:76501261(-)__10_76489001_76514001D;SPAN=5323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92
10	76586965	556162:1	C	C[10:76591819[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=556162:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76586965(+)-10:76591819(-)__10_76587001_76612001D;SPAN=4854;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:14:12.3:135.3,12.3,0:0:44:-135.3:135.3
10	76591819	556162:2	A	]10:76586965]A	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556162:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76586965(+)-10:76591819(-)__10_76587001_76612001D;SPAN=4854;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:14:12.3:135.3,12.3,0:0:44:-135.3:135.3
10	77573728	556451:2	G	G]2:70434172]	10	PASS	DISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=ATAGAATAGAATAGAATAG;INSERTION=C;MAPQ=11;MATEID=556451:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATA;SCTG=c_10_77567001_77592001_32C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:19:3.4:10.3,0,3.4:2:9:-10.19:10.19
10	79332425	556796:1	T	T[10:79333024[	85	PASS	EVDNC=ASSMB;INSERTION=TTCTTCTCAATATAATGTCT;MAPQ=60;MATEID=556796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_79331001_79356001_10C;SPAN=599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:28:0:-85.82:85.82
10	79333024	556796:2	G	]10:79332425]G	85	PASS	EVDNC=ASSMB;INSERTION=TTCTTCTCAATATAATGTCT;MAPQ=60;MATEID=556796:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_79331001_79356001_10C;SPAN=599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:28:0:-85.82:85.82
10	80977995	557187:1	T	T[10:80978301[	38	PASS	EVDNC=ASSMB;HOMSEQ=GGTGCTTTCTCTTT;MAPQ=60;MATEID=557187:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_67C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03
10	80978301	557187:2	G	]10:80977995]G	38	PASS	EVDNC=ASSMB;HOMSEQ=GGTGCTTTCTCTTT;MAPQ=60;MATEID=557187:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_80972501_80997501_67C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03
10	80990542	557201:1	G	G[10:80992894[	92	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=557201:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_16C;SPAN=2352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:29:8.4:92.4,8.4,0:30:0:-92.42:92.42
10	80992894	557201:2	T	]10:80990542]T	92	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=557201:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_16C;SPAN=2352;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:29:8.4:92.4,8.4,0:30:0:-92.42:92.42
10	81144901	557229:1	G	G[10:81145155[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=557229:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_81144001_81169001_16C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
10	81145155	557229:2	T	]10:81144901]T	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=557229:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_81144001_81169001_16C;SPAN=254;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
10	81212443	988144:1	A	[Un_KN707693v1_decoy:1[A	66	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCAATTAAACCTCTTTCCTTTATAAATTA;INSERTION=CTACCGCCATGTAAAGAAGGACGTGTTTGCTTCCCTTTCCAA;MAPQ=60;MATEID=988144:2;MATENM=2;NM=0;NUMPARTS=6;SCTG=c_544_1_2899_9C;SPAN=-1;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:7:6:66,6,0:22:0:-66.02:66.02
10	81212445	988145:1	A	A]Un_KN707693v1_decoy:2899]	49	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988145:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_544_1_2899_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51
10	81753084	557475:1	A	]10:83297494]A	12	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=557475:2;MATENM=0;NM=1;NUMPARTS=2;REPSEQ=AA;SCTG=c_10_81732001_81757001_7C;SECONDARY;SPAN=1544410;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:15:12.2:12.2,0,25.4:3:3:-12.29:12.54
10	82229402	557634:1	A	A[10:82238231[	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAA;MAPQ=60;MATEID=557634:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_82222001_82247001_45C;SPAN=8829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:5:6:-18.26:19.27
10	82238231	557634:2	A	]10:82229402]A	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAA;MAPQ=60;MATEID=557634:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_82222001_82247001_45C;SPAN=8829;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:5:6:-18.26:19.27
10	82529077	557702:1	T	T[10:82658176[	42	PASS	EVDNC=ASSMB;INSERTION=ATATAT;MAPQ=60;MATEID=557702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_82638501_82663501_36C;SPAN=129099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
10	82658176	557702:2	A	]10:82529077]A	42	PASS	EVDNC=ASSMB;INSERTION=ATATAT;MAPQ=60;MATEID=557702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_82638501_82663501_36C;SPAN=129099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
10	83297494	557475:2	G	G[10:81753084[	12	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=0;MATEID=557475:1;MATENM=1;NM=0;NUMPARTS=2;REPSEQ=AA;SCTG=c_10_81732001_81757001_7C;SECONDARY;SPAN=1544410;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:15:12.2:12.2,0,25.4:3:3:-12.29:12.54
10	83907452	558069:1	A	]10:83907659]A	34	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=558069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_83888001_83913001_24C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12
10	83907659	558069:2	A	A[10:83907452[	34	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=558069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_83888001_83913001_24C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12
10	85042018	558387:1	T	T[10:85042685[	59	PASS	EVDNC=ASSMB;INSERTION=CATTCTGATTAATCCTTCTTG;MAPQ=60;MATEID=558387:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_85039501_85064501_14C;SPAN=667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66
10	85042021	558389:1	C	]10:85042847]C	68	PASS	EVDNC=ASSMB;INSERTION=AAATT;MAPQ=60;MATEID=558389:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_85039501_85064501_70C;SPAN=826;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:38:25.7:68.6,0,25.7:24:0:-69.52:69.52
10	85042685	558387:2	T	]10:85042018]T	59	PASS	EVDNC=ASSMB;INSERTION=CATTCTGATTAATCCTTCTTG;MAPQ=60;MATEID=558387:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_85039501_85064501_14C;SPAN=667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66
10	85042847	558389:2	T	T[10:85042021[	68	PASS	EVDNC=ASSMB;INSERTION=AAATT;MAPQ=60;MATEID=558389:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_85039501_85064501_70C;SPAN=826;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:38:25.7:68.6,0,25.7:24:0:-69.52:69.52
10	86524714	558731:1	C	]10:86524809]C	65	PASS	EVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=558731:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_86509501_86534501_39C;SPAN=95;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18
10	86524809	558731:2	G	G[10:86524714[	65	PASS	EVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=558731:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_86509501_86534501_39C;SPAN=95;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18
10	87516040	559033:1	G	G[10:87516812[	49	PASS	DISC_MAPQ=51;EVDNC=ASDIS;INSERTION=TGAAAATACATGT;MAPQ=60;MATEID=559033:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_87514001_87539001_34C;SPAN=772;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:14:8:-49.51:49.51
10	87516812	559033:2	A	]10:87516040]A	49	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TGAAAATACATGT;MAPQ=60;MATEID=559033:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_87514001_87539001_34C;SPAN=772;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:14:8:-49.51:49.51
10	88134552	559231:1	T	]10:88134621]T	41	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACCATCATTATAACCACCACTAC;INSERTION=CCATCACCATCATCATTATGACCACCTCACCACCACCACCACAAAGGCCATCATTATAACCACCGCTAACACTACTATCACCATCACCATCATCAT;MAPQ=60;MATEID=559231:2;MATENM=6;NM=1;NUMPARTS=3;REPSEQ=TACTACTAC;SCTG=c_10_88126501_88151501_3C;SPAN=69;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:80:41.8:41.8,0,49:35:0:-41.35:41.44
10	88134621	559231:2	A	A[10:88134552[	41	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACCATCATTATAACCACCACTAC;INSERTION=CCATCACCATCATCATTATGACCACCTCACCACCACCACCACAAAGGCCATCATTATAACCACCGCTAACACTACTATCACCATCACCATCATCAT;MAPQ=60;MATEID=559231:1;MATENM=1;NM=6;NUMPARTS=3;REPSEQ=TACTACTAC;SCTG=c_10_88126501_88151501_3C;SPAN=69;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:80:41.8:41.8,0,49:35:0:-41.35:41.44
10	92326236	560176:1	T	]10:92336729]T	17	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=560176:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92316001_92341001_16C;SPAN=10493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:42:17.9:17.9,0,87.2:9:0:-17.9:20.54
10	92336729	560176:2	A	A[10:92326236[	17	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=560176:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92316001_92341001_16C;SPAN=10493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:42:17.9:17.9,0,87.2:9:0:-17.9:20.54
10	92374842	560194:1	A	A[10:92377897[	59	PASS	EVDNC=ASSMB;INSERTION=GTTGACTTATCTTTT;MAPQ=60;MATEID=560194:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92365001_92390001_30C;SPAN=3055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
10	92377897	560194:2	A	]10:92374842]A	59	PASS	EVDNC=ASSMB;INSERTION=GTTGACTTATCTTTT;MAPQ=60;MATEID=560194:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92365001_92390001_30C;SPAN=3055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41
10	93785720	560655:1	A	A[10:93786739[	99	PASS	EVDNC=ASSMB;INSERTION=CCACCACATGGCACACAAAAGGGTG;MAPQ=60;MATEID=560655:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_10_93786001_93811001_55C;SPAN=1019;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:6:9.6:105.6,9.6,0:35:0:-105.6:105.6
10	93786739	560655:2	G	]10:93785720]G	99	PASS	EVDNC=ASSMB;INSERTION=CCACCACATGGCACACAAAAGGGTG;MAPQ=60;MATEID=560655:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_10_93786001_93811001_55C;SPAN=1019;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:6:9.6:105.6,9.6,0:35:0:-105.6:105.6
10	94531640	560853:2	T	]3:183712226]T	23	PASS	EVDNC=ASSMB;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTT;MAPQ=60;MATEID=560853:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_10_94521001_94546001_53C;SECONDARY;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
10	97275116	561674:1	G	G[10:97277641[	89	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGCACTG;MAPQ=60;MATEID=561674:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_97265001_97290001_7C;SPAN=2525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:16:8.1:89.1,8.1,0:29:0:-89.12:89.12
10	97277641	561674:2	T	]10:97275116]T	89	PASS	EVDNC=ASSMB;HOMSEQ=TAAAGCACTG;MAPQ=60;MATEID=561674:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_97265001_97290001_7C;SPAN=2525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:16:8.1:89.1,8.1,0:29:0:-89.12:89.12
10	97348534	561719:1	T	T[10:97348852[	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACTATCCT;MAPQ=60;MATEID=561719:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_97338501_97363501_125C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:18:7.8:85.8,7.8,0:23:6:-85.82:85.82
10	97348852	561719:2	C	]10:97348534]C	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACTATCCT;MAPQ=60;MATEID=561719:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_97338501_97363501_125C;SPAN=318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:18:7.8:85.8,7.8,0:23:6:-85.82:85.82
10	100092116	562623:2	C	[4:152957[C	36	PASS	DISC_MAPQ=9;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=562623:1;MATENM=0;NM=24;NUMPARTS=2;SCTG=c_10_100082501_100107501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:5:8:-36.31:36.31
10	100398553	562722:1	T	T[10:100399781[	59	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=562722:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_10_100376501_100401501_6C;SPAN=1228;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41
10	100399781	562722:2	C	]10:100398553]C	59	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=562722:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_10_100376501_100401501_6C;SPAN=1228;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41
10	101685980	563070:1	C	C[10:101686579[	38	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=563070:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_101675001_101700001_27C;SPAN=599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37
10	101686579	563070:2	T	]10:101685980]T	38	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=563070:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_101675001_101700001_27C;SPAN=599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37
10	103293432	563413:1	G	G[10:103294423[	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGG;MAPQ=60;MATEID=563413:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_103292001_103317001_15C;SPAN=991;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:8:7.2:79.2,7.2,0:17:10:-79.22:79.22
10	103294423	563413:2	G	]10:103293432]G	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGG;MAPQ=60;MATEID=563413:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_103292001_103317001_15C;SPAN=991;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:8:7.2:79.2,7.2,0:17:10:-79.22:79.22
10	103337782	563426:1	C	C[10:103338080[	39	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATACAAAATTAGC;MAPQ=60;MATEID=563426:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_103316501_103341501_31C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61
10	103338080	563426:2	A	]10:103337782]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATACAAAATTAGC;MAPQ=60;MATEID=563426:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_103316501_103341501_31C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61
10	105493244	563943:1	G	G[10:105493594[	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGG;MAPQ=60;MATEID=563943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_105472501_105497501_69C;SPAN=350;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:13:12:-66.02:66.02
10	105493594	563943:2	A	]10:105493244]A	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGG;MAPQ=60;MATEID=563943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_105472501_105497501_69C;SPAN=350;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:13:12:-66.02:66.02
10	106270563	564296:1	C	C[10:106272784[	38	PASS	EVDNC=ASSMB;HOMSEQ=CTCC;MAPQ=60;MATEID=564296:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_106256501_106281501_80C;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
10	106272784	564296:2	C	]10:106270563]C	38	PASS	EVDNC=ASSMB;HOMSEQ=CTCC;MAPQ=60;MATEID=564296:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_106256501_106281501_80C;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
10	108459565	564965:1	T	]10:108459702]T	23	PASS	EVDNC=ASSMB;HOMSEQ=TAAA;MAPQ=60;MATEID=564965:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_108437001_108462001_27C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:35:23.3:23.3,0,62.9:10:0:-23.17:24.27
10	108459702	564965:2	A	A[10:108459565[	23	PASS	EVDNC=ASSMB;HOMSEQ=TAAA;MAPQ=60;MATEID=564965:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_108437001_108462001_27C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:35:23.3:23.3,0,62.9:10:0:-23.17:24.27
10	108936075	565091:1	T	T[10:108936418[	32	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATATATATAT;INSERTION=GTATGAATATATATGTATGAATATATGAAAAA;MAPQ=60;MATEID=565091:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_10_108927001_108952001_35C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:24:26.3:32.9,0,26.3:12:0:-32.89:32.89
10	108936418	565091:2	T	]10:108936075]T	32	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATATATATAT;INSERTION=GTATGAATATATATGTATGAATATATGAAAAA;MAPQ=60;MATEID=565091:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_10_108927001_108952001_35C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:24:26.3:32.9,0,26.3:12:0:-32.89:32.89
10	109812476	565264:1	C	C[10:109818458[	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=565264:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:109812476(+)-10:109818458(-)__10_109809001_109834001D;SPAN=5982;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92
10	109818458	565264:2	T	]10:109812476]T	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=565264:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:109812476(+)-10:109818458(-)__10_109809001_109834001D;SPAN=5982;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92
10	110418405	565388:2	A	A[7:93347523[	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=565388:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_110397001_110422001_54C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:12:6.6:72.6,6.6,0:14:15:-72.62:72.62
10	112352425	565981:1	G	G[10:112356901[	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=565981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_112357001_112382001_92C;SPAN=4476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:5:3:1.2:13.2,1.2,0:4:3:-13.2:13.2
10	112356901	565981:2	G	]10:112352425]G	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=565981:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_112357001_112382001_92C;SPAN=4476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:5:3:1.2:13.2,1.2,0:4:3:-13.2:13.2
10	112916251	566258:1	T	T[10:113538596[	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=566258:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113533001_113558001_15C;SPAN=622345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
10	113538596	566258:2	T	]10:112916251]T	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=566258:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113533001_113558001_15C;SPAN=622345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83
10	113789804	566308:1	C	C[10:113790335[	19	PASS	EVDNC=ASSMB;HOMSEQ=GGTGGCTCATGC;MAPQ=60;MATEID=566308:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113778001_113803001_1C;SPAN=531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
10	113790335	566308:2	G	]10:113789804]G	19	PASS	EVDNC=ASSMB;HOMSEQ=GGTGGCTCATGC;MAPQ=60;MATEID=566308:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113778001_113803001_1C;SPAN=531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
10	115697337	566990:1	A	]10:115917901]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=566990:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_115909501_115934501_2C;SPAN=220564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18
10	115917901	566990:2	T	T[10:115697337[	39	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=566990:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_115909501_115934501_2C;SPAN=220564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18
10	116079800	567050:1	A	A[10:116121012[	23	PASS	EVDNC=ASSMB;HOMSEQ=TCGA;MAPQ=60;MATEID=567050:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116105501_116130501_72C;SPAN=41212;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
10	116121012	567050:2	T	]10:116079800]T	23	PASS	EVDNC=ASSMB;HOMSEQ=TCGA;MAPQ=60;MATEID=567050:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116105501_116130501_72C;SPAN=41212;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34
10	116902437	567330:1	T	]10:116990707]T	29	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TTTTCA;MAPQ=60;MATEID=567330:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116987501_117012501_21C;SPAN=88270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:6:6:-31.35:31.35
10	116990707	567330:2	A	A[10:116902437[	29	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTTTCA;MAPQ=60;MATEID=567330:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116987501_117012501_21C;SPAN=88270;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:6:6:-31.35:31.35
10	119426866	568110:1	T	]10:119427330]T	21	PASS	DISC_MAPQ=35;EVDNC=ASDIS;HOMSEQ=TGCCATCAACAGCATCACTGCC;MAPQ=35;MATEID=568110:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_119413001_119438001_56C;SPAN=464;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:53:21.5:21.5,0,110.6:4:7:-21.41:24.93
10	119427330	568110:2	C	C[10:119426866[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCCATCAACAGCATCACTGCC;MAPQ=60;MATEID=568110:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_119413001_119438001_56C;SPAN=464;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:53:21.5:21.5,0,110.6:4:7:-21.41:24.93
10	120467203	568417:1	C	C[10:120469236[	59	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGACTGCAGTGGCACAATCTCAGCTCACTGCAAGCTCCACCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=568417:2;MATENM=5;NM=5;NUMPARTS=2;SCTG=c_10_120466501_120491501_15C;SPAN=2033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:3:5.4:59.4,5.4,0:4:16:-59.41:59.41
10	120469236	568417:2	T	]10:120467203]T	59	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGACTGCAGTGGCACAATCTCAGCTCACTGCAAGCTCCACCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=568417:1;MATENM=5;NM=5;NUMPARTS=2;SCTG=c_10_120466501_120491501_15C;SPAN=2033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:3:5.4:59.4,5.4,0:4:16:-59.41:59.41
10	122457304	569156:1	G	G[10:122457748[	72	PASS	EVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
10	122457748	569156:2	A	]10:122457304]A	72	PASS	EVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
10	121496612	569156:2	A	]10:122457304]C	72	PASS	EVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62
10	123254349	569333:1	T	]10:123254874]T	43	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=569333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254349(-)-10:123254874(+)__10_123235001_123260001D;SPAN=525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:33:37.1:43.7,0,37.1:0:16:-43.55:43.55
10	123254874	569333:2	A	A[10:123254349[	43	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=569333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254349(-)-10:123254874(+)__10_123235001_123260001D;SPAN=525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:33:37.1:43.7,0,37.1:0:16:-43.55:43.55
10	123254953	569351:1	C	]10:123255771]C	61	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=569351:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254953(-)-10:123255771(+)__10_123235001_123260001D;SPAN=818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:0:22:-62:62
10	123255771	569351:2	A	A[10:123254953[	61	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=569351:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254953(-)-10:123255771(+)__10_123235001_123260001D;SPAN=818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:0:22:-62:62
10	125501848	570076:1	T	[10:125502195[T	47	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=570076:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125501848(-)-10:125502195(-)__10_125489001_125514001D;SPAN=347;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:0:17:-46.91:46.91
10	125502112	570079:1	C	C]10:125508653]	99	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=570079:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_4C;SPAN=6541;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:30:9:99,9,0:33:0:-99.02:99.02
10	125502195	570076:2	C	[10:125501848[C	47	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=570076:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125501848(-)-10:125502195(-)__10_125489001_125514001D;SPAN=347;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:0:17:-46.91:46.91
10	125502228	570080:1	C	]10:125512653]C	42	PASS	EVDNC=ASSMB;HOMSEQ=CCACCAT;MAPQ=60;MATEID=570080:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_23C;SPAN=10425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:37:42.5:42.5,0,49.1:16:0:-42.42:42.46
10	125503088	570084:1	C	C[10:125508666[	57	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=570084:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_8C;SPAN=5578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:29:14.9:57.8,0,14.9:20:0:-59.26:59.26
10	125508653	570079:2	A	A]10:125502112]	99	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=570079:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_125489001_125514001_4C;SPAN=6541;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:30:9:99,9,0:33:0:-99.02:99.02
10	125508666	570084:2	G	]10:125503088]G	57	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=570084:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_10_125489001_125514001_8C;SPAN=5578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:29:14.9:57.8,0,14.9:20:0:-59.26:59.26
10	125512653	570080:2	T	T[10:125502228[	42	PASS	EVDNC=ASSMB;HOMSEQ=CCACCAT;MAPQ=60;MATEID=570080:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_23C;SPAN=10425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:37:42.5:42.5,0,49.1:16:0:-42.42:42.46
10	125894203	907396:1	A	A[22:10739861[	44	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=907396:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125894203(+)-22:10739861(-)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:75:44.9:44.9,0,143.9:0:20:-44.94:47.83
10	125895950	907397:1	C	]22:10741540]C	25	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=907397:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125895950(-)-22:10741540(+)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35
10	126251496	570306:1	C	]10:126252270]C	35	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=570306:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:126251496(-)-10:126252270(+)__10_126248501_126273501D;SPAN=774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:37:35.9:35.9,0,55.7:0:14:-35.81:36.09
10	126252270	570306:2	G	G[10:126251496[	35	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=570306:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:126251496(-)-10:126252270(+)__10_126248501_126273501D;SPAN=774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:37:35.9:35.9,0,55.7:0:14:-35.81:36.09
10	126892082	570478:2	A	]7:26639999]A	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=570478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26639999(+)-10:126892082(-)__10_126885501_126910501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
10	127169427	570581:1	T	T[10:127169686[	9	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=570581:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_127155001_127180001_14C;SPAN=259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:25:9.5:9.5,0,52.4:5:0:-9.478:11.24
10	127169686	570581:2	T	]10:127169427]T	9	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=570581:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_127155001_127180001_14C;SPAN=259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:25:9.5:9.5,0,52.4:5:0:-9.478:11.24
10	127767049	570874:1	T	T[10:127767345[	62	PASS	EVDNC=ASSMB;HOMSEQ=TAGTTTTTTTT;MAPQ=60;MATEID=570874:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_127743001_127768001_17C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:14:5.7:62.7,5.7,0:21:0:-62.72:62.72
10	127767345	570874:2	T	]10:127767049]T	62	PASS	EVDNC=ASSMB;HOMSEQ=TAGTTTTTTTT;MAPQ=60;MATEID=570874:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_127743001_127768001_17C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:14:5.7:62.7,5.7,0:21:0:-62.72:62.72
10	129038607	571258:1	T	T[10:129039011[	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=571258:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_129017001_129042001_63C;SPAN=404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:7:4:-24.3:24.91
10	129039011	571258:2	T	]10:129038607]T	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=571258:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_129017001_129042001_63C;SPAN=404;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:7:4:-24.3:24.91
10	129796916	571494:1	A	A[10:129797210[	20	PASS	EVDNC=ASSMB;HOMSEQ=GCA;MAPQ=60;MATEID=571494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_129776501_129801501_112C;SPAN=294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45
10	129797210	571494:2	G	]10:129796916]G	20	PASS	EVDNC=ASSMB;HOMSEQ=GCA;MAPQ=60;MATEID=571494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_129776501_129801501_112C;SPAN=294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45
10	130496358	571701:1	C	]10:130496511]C	96	PASS	EVDNC=ASSMB;INSERTION=GCATGATGACTTCG;MAPQ=60;MATEID=571701:2;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_10_130487001_130512001_9C;SPAN=153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:79:96.8:96.8,0,100.1:36:0:-96.63:96.64
10	130496418	571702:1	G	]10:130496534]G	85	PASS	EVDNC=ASSMB;INSERTION=GGGATGGAAGTAACCTTCTGCATGATGACTTCGCTAGTACATGGGAGGGAA;MAPQ=60;MATEID=571702:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_10_130487001_130512001_1C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:96:85.4:85.4,0,154.7:34:0:-85.25:86.4
10	130496511	571701:2	T	T[10:130496358[	96	PASS	EVDNC=ASSMB;INSERTION=GCATGATGACTTCG;MAPQ=60;MATEID=571701:1;MATENM=4;NM=6;NUMPARTS=2;SCTG=c_10_130487001_130512001_9C;SPAN=153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:79:96.8:96.8,0,100.1:36:0:-96.63:96.64
10	130496534	571702:2	C	C[10:130496418[	85	PASS	EVDNC=ASSMB;INSERTION=GGGATGGAAGTAACCTTCTGCATGATGACTTCGCTAGTACATGGGAGGGAA;MAPQ=60;MATEID=571702:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_10_130487001_130512001_1C;SPAN=116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:96:85.4:85.4,0,154.7:34:0:-85.25:86.4
10	130790016	571781:1	T	]10:130790900]T	60	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=571781:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:130790016(-)-10:130790900(+)__10_130781001_130806001D;SPAN=884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:31:14.6:60.8,0,14.6:0:21:-61.93:61.93
10	130790062	571782:1	C	]10:130790698]C	38	PASS	EVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=571782:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_130781001_130806001_6C;SPAN=636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:53:38:38,0,94.1:16:0:-37.92:39.29
10	130790698	571782:2	A	A[10:130790062[	38	PASS	EVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=571782:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_130781001_130806001_6C;SPAN=636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:53:38:38,0,94.1:16:0:-37.92:39.29
10	130790900	571781:2	A	A[10:130790016[	60	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=571781:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:130790016(-)-10:130790900(+)__10_130781001_130806001D;SPAN=884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:31:14.6:60.8,0,14.6:0:21:-61.93:61.93
10	131176381	571919:1	A	]10:131177187]A	61	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=571919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:131176381(-)-10:131177187(+)__10_131173001_131198001D;SPAN=806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:40:38.3:61.4,0,38.3:0:22:-61.64:61.64
10	131177187	571919:2	C	C[10:131176381[	61	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=571919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:131176381(-)-10:131177187(+)__10_131173001_131198001D;SPAN=806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:40:38.3:61.4,0,38.3:0:22:-61.64:61.64
10	132056598	785033:1	A	A[17:19919536[	22	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=785033:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:132056598(+)-17:19919536(-)__17_19918501_19943501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
10	133291375	572642:1	G	G[10:133292453[	39	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=572642:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:133291375(+)-10:133292453(-)__10_133280001_133305001D;SPAN=1078;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:9:3.6:39.6,3.6,0:0:13:-39.61:39.61
10	133292453	572642:2	C	]10:133291375]C	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=572642:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:133291375(+)-10:133292453(-)__10_133280001_133305001D;SPAN=1078;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:9:3.6:39.6,3.6,0:0:13:-39.61:39.61
11	737067	574073:1	C	]11:3896184]C	69	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAAGTGCTGGGATTACAGGCG;MAPQ=60;MATEID=574073:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_3895501_3920501_27C;SPAN=3159117;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:21:5:-69.32:69.32
11	1078576	573385:1	C	C[11:1081475[	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=573385:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1078576(+)-11:1081475(-)__11_1053501_1078501D;SPAN=2899;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
11	1081475	573385:2	C	]11:1078576]C	36	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=573385:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1078576(+)-11:1081475(-)__11_1053501_1078501D;SPAN=2899;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31
11	1094541	573395:1	C	]11:1095052]C	15	PASS	DISC_MAPQ=7;EVDNC=TSI_L;INSERTION=TCTCCAATAACCACCACTCCCAGCCCTCCAACAACCACCATGACCACCCCTT;MAPQ=25;MATEID=573395:2;MATENM=3;NM=1;NUMPARTS=3;REPSEQ=ACCAACCA;SCTG=c_11_1078001_1103001_13C;SPAN=511;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:33:15:15,0,27:10:3:-14.72:15.08
11	1095052	573395:2	C	C[11:1094541[	15	PASS	DISC_MAPQ=28;EVDNC=TSI_L;INSERTION=TCTCCAATAACCACCACTCCCAGCCCTCCAACAACCACCATGACCACCCCTT;MAPQ=21;MATEID=573395:1;MATENM=1;NM=3;NUMPARTS=3;REPSEQ=ACCAACCA;SCTG=c_11_1078001_1103001_13C;SPAN=511;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:33:15:15,0,27:10:3:-14.72:15.08
11	1155037	573441:1	T	]11:1155851]T	79	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=573441:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1155037(-)-11:1155851(+)__11_1151501_1176501D;SPAN=814;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:22:7.2:79.2,7.2,0:0:26:-79.22:79.22
11	1155851	573441:2	T	T[11:1155037[	79	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=573441:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1155037(-)-11:1155851(+)__11_1151501_1176501D;SPAN=814;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:22:7.2:79.2,7.2,0:0:26:-79.22:79.22
11	1894138	573614:1	G	G[11:1915725[	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=573614:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1894138(+)-11:1915725(-)__11_1911001_1936001D;SPAN=21587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	1915725	573614:2	T	]11:1894138]T	23	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=573614:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1894138(+)-11:1915725(-)__11_1911001_1936001D;SPAN=21587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	3896184	574073:2	G	G[11:737067[	69	PASS	DISC_MAPQ=24;EVDNC=ASDIS;HOMSEQ=CCAAAGTGCTGGGATTACAGGCG;MAPQ=60;MATEID=574073:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_3895501_3920501_27C;SPAN=3159117;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:21:5:-69.32:69.32
11	5738972	574496:1	T	T[11:5741140[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=574496:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:5738972(+)-11:5741140(-)__11_5733001_5758001D;SPAN=2168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:4:4.2:46.2,4.2,0:0:15:-46.21:46.21
11	5741140	574496:2	A	]11:5738972]A	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=574496:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:5738972(+)-11:5741140(-)__11_5733001_5758001D;SPAN=2168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:4:4.2:46.2,4.2,0:0:15:-46.21:46.21
11	7768817	574901:1	C	C[11:7770406[	29	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=574901:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:7768817(+)-11:7770406(-)__11_7766501_7791501D;SPAN=1589;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
11	7770406	574901:2	T	]11:7768817]T	29	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=574901:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:7768817(+)-11:7770406(-)__11_7766501_7791501D;SPAN=1589;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71
11	8406229	575098:2	A	A[10:53531687[	26	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=575098:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53531687(-)-11:8406229(+)__11_8403501_8428501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	9302135	575297:1	T	T[11:9303055[	39	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=575297:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:9302135(+)-11:9303055(-)__11_9285501_9310501D;SPAN=920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:2:3.6:39.6,3.6,0:0:13:-39.61:39.61
11	9303055	575297:2	T	]11:9302135]T	39	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=575297:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:9302135(+)-11:9303055(-)__11_9285501_9310501D;SPAN=920;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:2:3.6:39.6,3.6,0:0:13:-39.61:39.61
11	10271301	575583:1	T	T[11:10272287[	56	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=575583:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:10271301(+)-11:10272287(-)__11_10265501_10290501D;SPAN=986;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
11	10272287	575583:2	G	]11:10271301]G	56	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=575583:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:10271301(+)-11:10272287(-)__11_10265501_10290501D;SPAN=986;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11
11	15686349	587688:1	G	G]11:47893214]	92	PASS	DISC_MAPQ=6;EVDNC=ASDIS;HOMSEQ=CCTCTGCCC;MAPQ=53;MATEID=587688:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_11_47873001_47898001_103C;SPAN=32206865;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:26:5:-92.42:92.42
11	16576031	577036:1	C	C[11:16576340[	89	PASS	EVDNC=ASSMB;HOMSEQ=GAAAACCACAACTAC;MAPQ=60;MATEID=577036:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_16562001_16587001_22C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12
11	16576340	577036:2	G	]11:16576031]G	89	PASS	EVDNC=ASSMB;HOMSEQ=GAAAACCACAACTAC;MAPQ=60;MATEID=577036:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_16562001_16587001_22C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12
11	17174305	577223:1	C	C[11:17174606[	16	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAACAGC;MAPQ=60;MATEID=577223:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_17174501_17199501_24C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:6:6:1.5:16.5,1.5,0:6:0:-16.5:16.5
11	17174606	577223:2	A	]11:17174305]A	16	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAAACAGC;MAPQ=60;MATEID=577223:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_17174501_17199501_24C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:6:6:1.5:16.5,1.5,0:6:0:-16.5:16.5
11	18373486	577582:1	G	G[11:18374069[	24	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=577582:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_18350501_18375501_25C;SPAN=583;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
11	18374069	577582:2	G	]11:18373486]G	24	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=577582:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_18350501_18375501_25C;SPAN=583;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
11	18465185	577693:1	T	]11:18561273]T	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCTA;MAPQ=60;MATEID=577693:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_18546501_18571501_89C;SPAN=96088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:18:14.9:14.9,0,28.1:5:4:-14.75:15.05
11	18561273	577693:2	G	G[11:18465185[	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCTA;MAPQ=60;MATEID=577693:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_18546501_18571501_89C;SPAN=96088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:18:14.9:14.9,0,28.1:5:4:-14.75:15.05
11	20762949	578367:2	T	[1:53954306[T	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=578367:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_20751501_20776501_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:9:3.6:39.6,3.6,0:11:3:-39.61:39.61
11	23346027	579444:1	A	]11:23363347]A	22	PASS	EVDNC=ASSMB;INSERTION=ACTGCAC;MAPQ=60;MATEID=579444:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_23348501_23373501_147C;SPAN=17320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
11	23363347	579444:2	G	G[11:23346027[	22	PASS	EVDNC=ASSMB;INSERTION=ACTGCAC;MAPQ=60;MATEID=579444:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_23348501_23373501_147C;SPAN=17320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93
11	24263186	579826:1	T	T]11:24266369]	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=579826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_12C;SPAN=3183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:36:6.5:82.4,0,6.5:27:3:-85.84:85.84
11	24263419	579827:1	C	C[11:24266243[	67	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAC;MAPQ=60;MATEID=579827:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_51C;SPAN=2824;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:29:5:67.7,0,5:22:7:-70.94:70.94
11	24263577	579828:1	T	[11:24266034[T	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=579828:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_26C;SPAN=2457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:8:3:-32.57:32.57
11	24263704	579829:1	A	A[11:24266691[	41	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=579829:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_57C;SPAN=2987;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24
11	24266034	579828:2	T	[11:24263577[T	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=579828:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_26C;SPAN=2457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:8:3:-32.57:32.57
11	24266243	579827:2	A	]11:24263419]A	67	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAC;MAPQ=60;MATEID=579827:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_51C;SPAN=2824;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:29:5:67.7,0,5:22:7:-70.94:70.94
11	24266369	579826:2	G	G]11:24263186]	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=579826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_12C;SPAN=3183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:36:6.5:82.4,0,6.5:27:3:-85.84:85.84
11	24266691	579829:2	C	]11:24263704]C	41	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=579829:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_57C;SPAN=2987;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24
11	25101793	135182:2	T	[2:193213246[T	85	PASS	DISC_MAPQ=56;EVDNC=ASDIS;MAPQ=60;MATEID=135182:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_193207001_193232001_9C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:25:7:-85.82:85.82
11	25542940	580612:1	T	T[11:25543268[	55	PASS	EVDNC=ASSMB;HOMSEQ=AAAACCATGGATGT;MAPQ=60;MATEID=580612:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_25529001_25554001_47C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:49:55.7:55.7,0,65.6:21:0:-55.55:55.62
11	25543268	580612:2	A	]11:25542940]A	55	PASS	EVDNC=ASSMB;HOMSEQ=AAAACCATGGATGT;MAPQ=60;MATEID=580612:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_25529001_25554001_47C;SPAN=328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:49:55.7:55.7,0,65.6:21:0:-55.55:55.62
11	26007882	580897:1	A	A[11:26008113[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=580897:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_11_25994501_26019501_114C;SPAN=231;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:11:5:-46.21:46.21
11	26008113	580897:2	C	]11:26007882]C	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=580897:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_11_25994501_26019501_114C;SPAN=231;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:11:5:-46.21:46.21
11	27635716	581498:1	G	G[11:27636049[	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=581498:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_27636001_27661001_23C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:10:6:66,6,0:22:0:-66.02:66.02
11	27636049	581498:2	C	]11:27635716]C	66	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=581498:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_27636001_27661001_23C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:10:6:66,6,0:22:0:-66.02:66.02
11	28985768	581840:1	T	T[11:28991341[	99	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=581840:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:28985768(+)-11:28991341(-)__11_28983501_29008501D;SPAN=5573;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:8:9.3:102.3,9.3,0:0:34:-102.3:102.3
11	28991341	581840:2	G	]11:28985768]G	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=581840:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:28985768(+)-11:28991341(-)__11_28983501_29008501D;SPAN=5573;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:8:9.3:102.3,9.3,0:0:34:-102.3:102.3
11	29946032	582095:1	T	T[11:29946920[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=582095:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_29939001_29964001_1C;SPAN=888;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:9:8:-32.3:32.3
11	29946920	582095:2	T	]11:29946032]T	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=582095:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_29939001_29964001_1C;SPAN=888;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:9:8:-32.3:32.3
11	30928615	998922:1	A	]Un_JTFH01000719v1_decoy:1230]A	89	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=998922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1562_1_1230_9C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12
11	31424301	582447:1	T	]11:31433215]T	26	PASS	EVDNC=ASSMB;INSERTION=ATCAAA;MAPQ=60;MATEID=582447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_31409001_31434001_21C;SPAN=8914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57
11	31433215	582447:2	A	A[11:31424301[	26	PASS	EVDNC=ASSMB;INSERTION=ATCAAA;MAPQ=60;MATEID=582447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_31409001_31434001_21C;SPAN=8914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57
11	32265107	582645:1	T	T[11:32265428[	23	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAGGTCTT;MAPQ=60;MATEID=582645:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_32242001_32267001_80C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:36:23:23,0,65.9:10:0:-22.89:24.13
11	32265428	582645:2	A	]11:32265107]A	23	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAAGGTCTT;MAPQ=60;MATEID=582645:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_32242001_32267001_80C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:36:23:23,0,65.9:10:0:-22.89:24.13
11	32367805	582688:1	T	T[11:32369112[	38	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=582688:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:32367805(+)-11:32369112(-)__11_32364501_32389501D;SPAN=1307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
11	32369112	582688:2	A	]11:32367805]A	38	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=582688:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:32367805(+)-11:32369112(-)__11_32364501_32389501D;SPAN=1307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
11	37407661	781898:1	T	T[17:10235400[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=781898:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10216501_10241501_78C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:9:5:-33.01:33.01
11	37940512	584524:1	G	G[11:37940821[	35	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATGCTTATTAG;MAPQ=60;MATEID=584524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_37926001_37951001_124C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:13:0:-35.33:35.33
11	37940821	584524:2	A	]11:37940512]A	35	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATGCTTATTAG;MAPQ=60;MATEID=584524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_37926001_37951001_124C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:13:0:-35.33:35.33
11	38791106	452809:2	G	]8:51819021]G	82	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51819021(+)-11:38791106(-)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52
11	38791187	452806:2	T	T[8:51817582[	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452806:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51817582(-)-11:38791187(+)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:13:4.5:49.5,4.5,0:0:17:-49.51:49.51
11	39783577	585236:1	T	T[11:39783900[	64	PASS	EVDNC=ASSMB;HOMSEQ=CAATTTGTAATAT;MAPQ=60;MATEID=585236:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_39763501_39788501_72C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:30:11.3:64.1,0,11.3:22:0:-66.29:66.29
11	39783900	585236:2	C	]11:39783577]C	64	PASS	EVDNC=ASSMB;HOMSEQ=CAATTTGTAATAT;MAPQ=60;MATEID=585236:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_39763501_39788501_72C;SPAN=323;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:30:11.3:64.1,0,11.3:22:0:-66.29:66.29
11	40597161	585534:1	C	C[11:40597644[	19	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=585534:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40596501_40621501_146C;SPAN=483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
11	40597644	585534:2	A	]11:40597161]A	19	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=585534:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40596501_40621501_146C;SPAN=483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
11	40904857	585625:2	C	]6:32320801]C	39	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=585625:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40890501_40915501_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
11	41140440	585728:1	A	[11:41145493[A	14	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=ATTCCTACTGATCCATCAGAACCAA;MAPQ=60;MATEID=585728:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_41135501_41160501_22C;SPAN=5053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:6:3:-13.83:15.94
11	41145493	585728:2	A	[11:41140440[A	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTCCTACTGATCCATCAGAACCAA;MAPQ=60;MATEID=585728:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_41135501_41160501_22C;SPAN=5053;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:33:14:14,0,66.8:6:3:-13.83:15.94
11	42248172	586023:1	G	G]11:42253506]	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCCTGG;MAPQ=60;MATEID=586023:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_14C;SPAN=5334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:10:7:-37.93:37.93
11	42248419	586024:1	C	[11:42253515[C	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586024:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_9C;SPAN=5096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:8:6:-35.24:35.24
11	42253506	586023:2	G	G]11:42248172]	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCCTGG;MAPQ=60;MATEID=586023:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_14C;SPAN=5334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:10:7:-37.93:37.93
11	42253515	586024:2	G	[11:42248419[G	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586024:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_9C;SPAN=5096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:8:6:-35.24:35.24
11	43634621	886988:1	T	T[20:57463311[	22	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=886988:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57452501_57477501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98
11	45377756	213057:2	C	[3:196591623[C	99	PASS	DISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACTGCAA;MAPQ=49;MATEID=213057:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_196588001_196613001_28C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:15:12.6:138.6,12.6,0:44:7:-138.6:138.6
11	45796115	586861:1	G	[11:45799999[G	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586861:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_45790501_45815501_20C;SPAN=3884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:28:11.9:58.1,0,11.9:14:13:-59.83:59.83
11	45798229	600590:1	T	T]11:86852881]	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=600590:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:45798229(+)-11:86852881(+)__11_86852501_86877501D;SPAN=41054652;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21
11	45799999	586861:2	C	[11:45796115[C	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586861:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_45790501_45815501_20C;SPAN=3884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:28:11.9:58.1,0,11.9:14:13:-59.83:59.83
11	46014697	586937:1	G	G[11:46015032[	51	PASS	EVDNC=ASSMB;HOMSEQ=AATAGTTATTCTG;MAPQ=60;MATEID=586937:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46011001_46036001_60C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:39:45.2:51.8,0,45.2:19:0:-51.77:51.77
11	46015032	586937:2	A	]11:46014697]A	51	PASS	EVDNC=ASSMB;HOMSEQ=AATAGTTATTCTG;MAPQ=60;MATEID=586937:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46011001_46036001_60C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:39:45.2:51.8,0,45.2:19:0:-51.77:51.77
11	46139466	586977:1	T	T[11:46140850[	99	PASS	EVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=586977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46133501_46158501_61C;SPAN=1384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:25:12.6:138.6,12.6,0:45:0:-138.6:138.6
11	46140850	586977:2	A	]11:46139466]A	99	PASS	EVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=586977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46133501_46158501_61C;SPAN=1384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:25:12.6:138.6,12.6,0:45:0:-138.6:138.6
11	46721219	587147:1	T	]11:46722062]T	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTC;MAPQ=60;MATEID=587147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46721501_46746501_23C;SPAN=843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:11:11:-52.81:52.81
11	46722062	587147:2	C	C[11:46721219[	52	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTC;MAPQ=60;MATEID=587147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46721501_46746501_23C;SPAN=843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:11:11:-52.81:52.81
11	47638400	587549:1	T	T]Un_KN707750v1_decoy:4718]	92	PASS	EVDNC=ASSMB;HOMSEQ=CGTCTCTACTAAAAATACAAAAAAT;INSERTION=CCACATTAGAATTGGGGGCTATGTTAAAGCCTTAAAAAGTACACTGAGGACTGCAGGAACTGTTGCTATGTTTATATATATATGCAATTTTTTAGAGACAGGGTCTCAC;MAPQ=60;MATEID=587549:2;MATENM=0;NM=1;NUMPARTS=5;SCTG=c_11_47628001_47653001_50C;SPAN=-1;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:19:8.4:92.4,8.4,0:30:0:-92.42:92.42
11	47866115	587678:1	T	T[11:47866643[	47	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=587678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_47848501_47873501_36C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
11	47866643	587678:2	T	]11:47866115]T	47	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=587678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_47848501_47873501_36C;SPAN=528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
11	47893214	587688:2	C	C]11:15686349]	92	PASS	DISC_MAPQ=36;EVDNC=ASDIS;HOMSEQ=CCTCTGCCC;MAPQ=60;MATEID=587688:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_11_47873001_47898001_103C;SPAN=32206865;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:26:5:-92.42:92.42
11	48098519	587784:1	T	T[11:48098819[	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTATCTCTT;MAPQ=60;MATEID=587784:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48093501_48118501_81C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:21:5.7:62.7,5.7,0:15:8:-62.72:62.72
11	48098819	587784:2	T	]11:48098519]T	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTATCTCTT;MAPQ=60;MATEID=587784:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48093501_48118501_81C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:21:5.7:62.7,5.7,0:15:8:-62.72:62.72
11	48425278	587888:1	G	G[11:48425559[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATCAGATGGTTG;MAPQ=60;MATEID=587888:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48412001_48437001_21C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:15:12.6:138.6,12.6,0:42:4:-138.6:138.6
11	48425559	587888:2	A	]11:48425278]A	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAAATCAGATGGTTG;MAPQ=60;MATEID=587888:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48412001_48437001_21C;SPAN=281;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:15:12.6:138.6,12.6,0:42:4:-138.6:138.6
11	48579306	587957:1	C	C[11:48582731[	41	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=587957:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_48559001_48584001_185C;SPAN=3425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81
11	48582731	587957:2	T	]11:48579306]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=587957:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_48559001_48584001_185C;SPAN=3425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81
11	48692511	588007:1	C	C[11:48693522[	47	PASS	EVDNC=ASSMB;HOMSEQ=AAACCTTTCTTTTCATTC;MAPQ=60;MATEID=588007:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_11_48681501_48706501_76C;SPAN=1011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:17:0:-46.91:46.91
11	48693522	588007:2	A	]11:48692511]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AAACCTTTCTTTTCATTC;MAPQ=60;MATEID=588007:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_11_48681501_48706501_76C;SPAN=1011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:33:33.8:47,0,33.8:17:0:-46.91:46.91
11	48713228	588025:1	T	T[11:48715397[	82	PASS	DISC_MAPQ=38;EVDNC=ASDIS;HOMSEQ=TTCTCAGAAAGCTTCTTTCTAGTTTTTATTTGAAGATATTTCCTTTTT;MAPQ=60;MATEID=588025:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_11_48706001_48731001_50C;SPAN=2169;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:36:6.5:82.4,0,6.5:10:22:-85.84:85.84
11	48715397	588025:2	T	]11:48713228]T	82	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTCTCAGAAAGCTTCTTTCTAGTTTTTATTTGAAGATATTTCCTTTTT;MAPQ=60;MATEID=588025:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_11_48706001_48731001_50C;SPAN=2169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:36:6.5:82.4,0,6.5:10:22:-85.84:85.84
11	48788958	588088:1	G	G[11:48789585[	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCGTATTTCCCCAGAGGTCTCAATGGGCTCACAAATATCCCTTTG;MAPQ=60;MATEID=588088:2;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_11_48779501_48804501_8C;SPAN=627;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:30:10.8:118.8,10.8,0:25:16:-118.8:118.8
11	48789585	588088:2	A	]11:48788958]A	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCGTATTTCCCCAGAGGTCTCAATGGGCTCACAAATATCCCTTTG;MAPQ=60;MATEID=588088:1;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_11_48779501_48804501_8C;SPAN=627;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:30:10.8:118.8,10.8,0:25:16:-118.8:118.8
11	48859208	588242:1	A	A[11:48860190[	99	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGCATTCTCAGAAACGTCTTTGTGATGATTGCATTCA;MAPQ=60;MATEID=588242:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_11_48853001_48878001_28C;SPAN=982;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:15:14.7:161.7,14.7,0:31:33:-161.7:161.7
11	48860190	588242:2	T	]11:48859208]T	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGCATTCTCAGAAACGTCTTTGTGATGATTGCATTCA;MAPQ=60;MATEID=588242:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_11_48853001_48878001_28C;SPAN=982;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:15:14.7:161.7,14.7,0:31:33:-161.7:161.7
11	49817800	589101:1	C	]11:49852451]C	22	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=589101:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:49817800(-)-11:49852451(+)__11_49808501_49833501D;SPAN=34651;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
11	49852451	589101:2	G	G[11:49817800[	22	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=589101:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:49817800(-)-11:49852451(+)__11_49808501_49833501D;SPAN=34651;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
11	50147426	589366:1	C	C]11:50331713]	36	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=589366:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:50147426(+)-11:50331713(+)__11_50323001_50348001D;SPAN=184287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
11	50203333	589296:1	A	A[11:50206864[	36	PASS	EVDNC=ASSMB;HOMSEQ=GTGGCA;MAPQ=60;MATEID=589296:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50200501_50225501_52C;SPAN=3531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:36:36.2:36.2,0,52.7:14:0:-36.1:36.3
11	50206864	589296:2	G	]11:50203333]G	36	PASS	EVDNC=ASSMB;HOMSEQ=GTGGCA;MAPQ=60;MATEID=589296:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50200501_50225501_52C;SPAN=3531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:36:36.2:36.2,0,52.7:14:0:-36.1:36.3
11	50331713	589366:2	T	T]11:50147426]	36	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=589366:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:50147426(+)-11:50331713(+)__11_50323001_50348001D;SPAN=184287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
11	50725179	589562:1	A	A[11:50725446[	70	PASS	DISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=50;MATEID=589562:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50715001_50740001_108C;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:32:7.7:70.4,0,7.7:18:8:-72.78:72.78
11	50725446	589562:2	A	]11:50725179]A	70	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=589562:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50715001_50740001_108C;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:32:7.7:70.4,0,7.7:18:8:-72.78:72.78
11	51090773	589949:1	T	]11:52010440]T	23	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=589949:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51090773(-)-11:52010440(+)__11_51989001_52014001D;SPAN=919667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	51148091	589867:1	T	T[11:53674586[	26	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=589867:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51148091(+)-11:53674586(-)__11_51131501_51156501D;SPAN=2526495;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	51472984	590301:1	T	]11:53945514]T	26	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=590301:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51472984(-)-11:53945514(+)__11_53924501_53949501D;SPAN=2472530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	52010440	589949:2	T	T[11:51090773[	23	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=589949:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51090773(-)-11:52010440(+)__11_51989001_52014001D;SPAN=919667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	52680399	590204:1	C	]11:53344504]C	26	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=590204:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:52680399(-)-11:53344504(+)__11_53336501_53361501D;SPAN=664105;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	53344504	590204:2	A	A[11:52680399[	26	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=590204:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:52680399(-)-11:53344504(+)__11_53336501_53361501D;SPAN=664105;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	53674586	589867:2	T	]11:51148091]T	26	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=589867:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51148091(+)-11:53674586(-)__11_51131501_51156501D;SPAN=2526495;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	53945514	590301:2	G	G[11:51472984[	26	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=590301:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51472984(-)-11:53945514(+)__11_53924501_53949501D;SPAN=2472530;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
11	54345246	590459:1	C	]11:54372905]C	29	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590459:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54345246(-)-11:54372905(+)__11_54365501_54390501D;SPAN=27659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71
11	54347483	590434:1	T	T[11:54403730[	59	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=590434:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347483(+)-11:54403730(-)__11_54341001_54366001D;SPAN=56247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34
11	54347532	590435:1	T	T[11:54406005[	23	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590435:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347532(+)-11:54406005(-)__11_54341001_54366001D;SPAN=58473;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	54369337	590539:1	C	C[11:54406068[	20	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=590539:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54369337(+)-11:54406068(-)__11_54390001_54415001D;SPAN=36731;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
11	54372905	590459:2	A	A[11:54345246[	29	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590459:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54345246(-)-11:54372905(+)__11_54365501_54390501D;SPAN=27659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71
11	54374313	590545:1	T	T[11:54409169[	39	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=590545:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374313(+)-11:54409169(-)__11_54390001_54415001D;SPAN=34856;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:7:3.6:39.6,3.6,0:0:13:-39.61:39.61
11	54374525	590490:1	G	]11:54421527]G	21	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=590490:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374525(-)-11:54421527(+)__11_54365501_54390501D;SPAN=47002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07
11	54403730	590434:2	T	]11:54347483]T	59	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=590434:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347483(+)-11:54403730(-)__11_54341001_54366001D;SPAN=56247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34
11	54406005	590435:2	T	]11:54347532]T	23	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=590435:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347532(+)-11:54406005(-)__11_54341001_54366001D;SPAN=58473;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	54406068	590539:2	A	]11:54369337]A	20	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=590539:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54369337(+)-11:54406068(-)__11_54390001_54415001D;SPAN=36731;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
11	54409169	590545:2	T	]11:54374313]T	39	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=590545:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374313(+)-11:54409169(-)__11_54390001_54415001D;SPAN=34856;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:7:3.6:39.6,3.6,0:0:13:-39.61:39.61
11	54415654	590614:1	C	]11:54549099]C	19	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=590614:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54415654(-)-11:54549099(+)__11_54537001_54562001D;SPAN=133445;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
11	54421527	590490:2	T	T[11:54374525[	21	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=590490:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374525(-)-11:54421527(+)__11_54365501_54390501D;SPAN=47002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07
11	54544141	590639:1	A	A[11:54548140[	69	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=590639:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54544141(+)-11:54548140(-)__11_54537001_54562001D;SPAN=3999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:25:3.6:69.3,3.6,0:0:22:-70.38:70.38
11	54548140	590639:2	T	]11:54544141]T	69	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=590639:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54544141(+)-11:54548140(-)__11_54537001_54562001D;SPAN=3999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:25:3.6:69.3,3.6,0:0:22:-70.38:70.38
11	54549099	590614:2	A	A[11:54415654[	19	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=590614:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54415654(-)-11:54549099(+)__11_54537001_54562001D;SPAN=133445;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
11	54929760	590741:1	C	]11:54937289]C	70	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGATTCTACAACAACAGTGTTTCCAAAC;MAPQ=60;MATEID=590741:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_54929001_54954001_5C;SPAN=7529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:16:14:-73.47:73.47
11	54937289	590741:2	C	C[11:54929760[	70	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGATTCTACAACAACAGTGTTTCCAAAC;MAPQ=60;MATEID=590741:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_54929001_54954001_5C;SPAN=7529;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:16:14:-73.47:73.47
11	55239601	590830:1	T	T[11:55239896[	72	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAGTGCTTTGAGGCCTATGGTGGAAAAGGAAATAT;MAPQ=60;MATEID=590830:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_11_55223001_55248001_52C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:16:9:-72.62:72.62
11	55239896	590830:2	A	]11:55239601]A	72	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAGTGCTTTGAGGCCTATGGTGGAAAAGGAAATAT;MAPQ=60;MATEID=590830:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_11_55223001_55248001_52C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:17:6.6:72.6,6.6,0:16:9:-72.62:72.62
11	56497246	608067:1	G	[11:117255064[G	41	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=608067:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_117232501_117257501_23C;SPAN=60757818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:8:11:-42.92:42.92
11	58434792	591564:1	T	]11:58456014]T	30	PASS	DISC_MAPQ=29;EVDNC=ASDIS;INSERTION=GAGTTCAAGACCAGCTTGAAC;MAPQ=60;MATEID=591564:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_58432501_58457501_0C;SPAN=21222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:9:7:-30.82:30.82
11	58456014	591564:2	G	G[11:58434792[	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGTTCAAGACCAGCTTGAAC;MAPQ=60;MATEID=591564:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_58432501_58457501_0C;SPAN=21222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:20:17.6:30.8,0,17.6:9:7:-30.82:30.82
11	58826715	591625:1	T	T[11:58828547[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=591625:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_58824501_58849501_2C;SPAN=1832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21
11	58828547	591625:2	T	]11:58826715]T	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=591625:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_58824501_58849501_2C;SPAN=1832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21
11	59041829	591672:1	A	A[11:59042145[	75	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAGAATTCCAAGTGTTA;MAPQ=60;MATEID=591672:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_11_59020501_59045501_5C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:21:5:-75.92:75.92
11	59042145	591672:2	A	]11:59041829]A	75	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGAATTCCAAGTGTTA;MAPQ=60;MATEID=591672:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_11_59020501_59045501_5C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:8:6.9:75.9,6.9,0:21:5:-75.92:75.92
11	59681933	591775:2	G	[1:113684515[G	46	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=591775:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_59682001_59707001_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:8:13:-46.21:46.21
11	60986887	592149:1	G	]11:60990806]G	35	PASS	DISC_MAPQ=3;EVDNC=TSI_L;HOMSEQ=GGA;MAPQ=14;MATEID=592149:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_11_60980501_61005501_89C;SPAN=3919;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:25:26:35.9,0,26:13:4:-35.95:35.95
11	60990806	592149:2	A	A[11:60986887[	35	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGA;MAPQ=60;MATEID=592149:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_11_60980501_61005501_89C;SPAN=3919;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:25:26:35.9,0,26:13:4:-35.95:35.95
11	62009715	592412:1	C	]11:62010599]C	31	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=592412:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:62009715(-)-11:62010599(+)__11_62009501_62034501D;SPAN=884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:0:11:-31.6:31.6
11	62010599	592412:2	G	G[11:62009715[	31	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=592412:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:62009715(-)-11:62010599(+)__11_62009501_62034501D;SPAN=884;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:0:11:-31.6:31.6
11	62074341	592458:1	G	G[14:81320430[	99	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=592458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62058501_62083501_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:31:9:99,9,0:33:0:-99.02:99.02
11	62143053	592515:1	C	]11:62143188]C	25	PASS	EVDNC=ASSMB;HOMSEQ=CCACACTTTTGGGATCACAGCTCCTCC;MAPQ=60;MATEID=592515:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62132001_62157001_20C;SPAN=135;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:39:25.4:25.4,0,71.6:11:0:-25.35:26.63
11	62143188	592515:2	C	C[11:62143053[	25	PASS	EVDNC=ASSMB;HOMSEQ=CCACACTTTTGGGATCACAGCTCCTCC;MAPQ=60;MATEID=592515:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62132001_62157001_20C;SPAN=135;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:39:25.4:25.4,0,71.6:11:0:-25.35:26.63
11	62177315	592530:1	A	A[11:62177614[	56	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=592530:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62156501_62181501_84C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:24:3.2:56,0,3.2:19:0:-58.57:58.57
11	62177614	592530:2	T	]11:62177315]T	56	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=592530:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62156501_62181501_84C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:24:3.2:56,0,3.2:19:0:-58.57:58.57
11	63559621	592884:1	A	A[Un_KN707705v1_decoy:1[	48	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=592884:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63553001_63578001_31C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68
11	63559621	988237:1	A	A[Un_KN707705v1_decoy:1[	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988237:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_556_1_4632_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91
11	63931435	592993:1	C	]11:63934472]C	99	PASS	EVDNC=ASSMB;INSERTION=TCAGGGTACAAAAGGT;MAPQ=60;MATEID=592993:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_26C;SPAN=3037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:34:9.9:108.9,9.9,0:36:0:-108.9:108.9
11	63931437	592994:1	G	G[11:63934182[	80	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=592994:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_63920501_63945501_50C;SPAN=2745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
11	63934182	592994:2	G	]11:63931437]G	80	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=592994:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_50C;SPAN=2745;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
11	63934472	592993:2	G	G[11:63931435[	99	PASS	EVDNC=ASSMB;INSERTION=TCAGGGTACAAAAGGT;MAPQ=60;MATEID=592993:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_26C;SPAN=3037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:34:9.9:108.9,9.9,0:36:0:-108.9:108.9
11	65426022	593388:1	A	A[11:65426240[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=593388:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_65415001_65440001_11C;SPAN=218;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:37:22.7:22.7,0,68.9:10:0:-22.61:23.99
11	65426240	593388:2	T	]11:65426022]T	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=593388:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_65415001_65440001_11C;SPAN=218;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:37:22.7:22.7,0,68.9:10:0:-22.61:23.99
11	65440194	593780:1	C	]11:66536950]C	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=593780:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66517501_66542501_11C;SPAN=1096756;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:8:6:-32.57:32.57
11	65874744	593571:1	A	A[11:65876048[	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=593571:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:65874744(+)-11:65876048(-)__11_65856001_65881001D;SPAN=1304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
11	65876048	593571:2	T	]11:65874744]T	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=593571:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:65874744(+)-11:65876048(-)__11_65856001_65881001D;SPAN=1304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
11	66251221	593686:1	G	G]11:66252427]	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCATGCCCGGC;MAPQ=60;MATEID=593686:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_58C;SPAN=1206;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:10:4:-33.36:33.58
11	66251586	593687:1	A	[11:66252433[A	28	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCCCGTCTCTACTAAAAATACAAAA;MAPQ=60;MATEID=593687:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_48C;SPAN=847;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:4:8:-28.16:28.37
11	66252427	593686:2	C	C]11:66251221]	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCATGCCCGGC;MAPQ=60;MATEID=593686:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_66248001_66273001_58C;SPAN=1206;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:10:4:-33.36:33.58
11	66252433	593687:2	T	[11:66251586[T	28	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCCCGTCTCTACTAAAAATACAAAA;MAPQ=60;MATEID=593687:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_48C;SPAN=847;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:4:8:-28.16:28.37
11	66496959	716565:1	G	[14:103842390[G	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGG;MAPQ=60;MATEID=716565:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103831001_103856001_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:10:5:-34.32:34.32
11	66501326	716602:1	C	C]14:103910481]	33	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=716602:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103904501_103929501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:8:6:-33.92:33.92
11	66536950	593780:2	T	T[11:65440194[	32	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=593780:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66517501_66542501_11C;SPAN=1096756;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:8:6:-32.57:32.57
11	66609733	707094:1	T	]14:77757579]T	20	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=707094:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:66609733(-)-14:77757579(+)__14_77738501_77763501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:0:8:-20.79:20.87
11	66985273	593887:1	C	]11:67081007]C	33	PASS	DISC_MAPQ=52;EVDNC=ASDIS;INSERTION=TCA;MAPQ=60;MATEID=593887:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_67056501_67081501_1C;SPAN=95734;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:7:8:-33.01:33.01
11	67081007	593887:2	T	T[11:66985273[	33	PASS	DISC_MAPQ=54;EVDNC=ASDIS;INSERTION=TCA;MAPQ=30;MATEID=593887:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_67056501_67081501_1C;SPAN=95734;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:7:8:-33.01:33.01
11	67233499	593930:1	A	A[Un_JTFH01000424v1_decoy:1[	82	PASS	EVDNC=ASSMB;HOMSEQ=ACGTCTCTACTAAAAATACAA;MAPQ=60;MATEID=593930:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_11_67228001_67253001_41C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:27:0:-82.52:82.52
11	68515146	594493:1	C	]11:68643930]C	19	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=594493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515146(-)-11:68643930(+)__11_68624501_68649501D;SPAN=128784;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
11	68515404	594495:1	A	A[11:68644342[	21	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=594495:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515404(+)-11:68644342(-)__11_68624501_68649501D;SPAN=128938;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
11	68643930	594493:2	G	G[11:68515146[	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=594493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515146(-)-11:68643930(+)__11_68624501_68649501D;SPAN=128784;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07
11	68644342	594495:2	T	]11:68515404]T	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=594495:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515404(+)-11:68644342(-)__11_68624501_68649501D;SPAN=128938;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
11	70136449	595239:1	C	C[11:70138382[	45	PASS	EVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=595239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_70119001_70144001_87C;SPAN=1933;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5
11	70138382	595239:2	C	]11:70136449]C	45	PASS	EVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=595239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_70119001_70144001_87C;SPAN=1933;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5
11	71600176	595839:1	T	]11:71900157]T	26	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=595839:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:71600176(-)-11:71900157(+)__11_71589001_71614001D;SPAN=299981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
11	71900157	595839:2	C	C[11:71600176[	26	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=595839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:71600176(-)-11:71900157(+)__11_71589001_71614001D;SPAN=299981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
11	72150565	596054:1	T	T[11:72150869[	99	PASS	EVDNC=ASSMB;HOMSEQ=TACTGAATTGTT;MAPQ=60;MATEID=596054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_72128001_72153001_76C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:29:13.2:145.2,13.2,0:48:0:-145.2:145.2
11	72150869	596054:2	T	]11:72150565]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TACTGAATTGTT;MAPQ=60;MATEID=596054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_72128001_72153001_76C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:29:13.2:145.2,13.2,0:48:0:-145.2:145.2
11	73967021	608936:1	T	[11:119253540[T	99	PASS	DISC_MAPQ=2;EVDNC=TSI_L;INSERTION=CATGCACCACCACACCCAGCTAA;MAPQ=60;MATEID=608936:2;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=TTT;SCTG=c_11_119241501_119266501_36C;SPAN=45286519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:15:11.4:125.4,11.4,0:37:7:-125.4:125.4
11	73998981	596583:1	G	]11:73999180]G	68	PASS	EVDNC=ASSMB;HOMSEQ=GTGCAGTGGTGT;MAPQ=60;MATEID=596583:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_73990001_74015001_13C;SPAN=199;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:73:68.6:68.6,0,114.8:27:0:-68.61:69.25
11	73999180	596583:2	T	T[11:73998981[	68	PASS	EVDNC=ASSMB;HOMSEQ=GTGCAGTGGTGT;MAPQ=60;MATEID=596583:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_73990001_74015001_13C;SPAN=199;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:73:68.6:68.6,0,114.8:27:0:-68.61:69.25
11	74821378	596838:1	G	G[11:74821679[	68	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAATACAAGTGCGGG;MAPQ=60;MATEID=596838:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_74798501_74823501_57C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:28:2:68,0,2:23:0:-71.75:71.75
11	74821679	596838:2	A	]11:74821378]A	68	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAATACAAGTGCGGG;MAPQ=60;MATEID=596838:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_74798501_74823501_57C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:28:2:68,0,2:23:0:-71.75:71.75
11	75259137	596962:1	C	C[11:75259412[	3	PASS	EVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCGAGATCGCGCC;MAPQ=60;MATEID=596962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75239501_75264501_20C;SPAN=275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753
11	75259412	596962:2	T	]11:75259137]T	3	PASS	EVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCGAGATCGCGCC;MAPQ=60;MATEID=596962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75239501_75264501_20C;SPAN=275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753
11	75299453	597034:1	A	]11:75426606]A	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=597034:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75411001_75436001_53C;SPAN=127153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:9:11:-38.69:38.69
11	75426606	597034:2	A	A[11:75299453[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=597034:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75411001_75436001_53C;SPAN=127153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:27:28.7:38.6,0,28.7:9:11:-38.69:38.69
11	75857851	597159:1	T	]11:75857976]T	19	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=597159:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75852001_75877001_15C;SPAN=125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48
11	75857976	597159:2	T	T[11:75857851[	19	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=597159:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75852001_75877001_15C;SPAN=125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48
11	76704166	597476:1	A	]11:76896079]A	13	PASS	EVDNC=ASSMB;INSERTION=GTCACGGGGA;MAPQ=60;MATEID=597476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_76881001_76906001_31C;SPAN=191913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
11	76896079	597476:2	T	T[11:76704166[	13	PASS	EVDNC=ASSMB;INSERTION=GTCACGGGGA;MAPQ=60;MATEID=597476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_76881001_76906001_31C;SPAN=191913;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84
11	78154046	153237:2	A	A]3:10636914]	37	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AAA;MAPQ=60;MATEID=153237:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_10633001_10658001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:10:4:-37.47:37.47
11	79416445	598284:1	A	]11:79479471]A	36	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=ATTTTCTTTA;MAPQ=60;MATEID=598284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_79478001_79503001_20C;SPAN=63026;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:4:10:-36.66:36.66
11	79479471	598284:2	A	A[11:79416445[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTTTCTTTA;MAPQ=60;MATEID=598284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_79478001_79503001_20C;SPAN=63026;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:4:10:-36.66:36.66
11	85506446	600483:1	T	[11:86544042[T	56	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TTTATTTCTGCCTTTATTTCATTATGTACCCAGTAATCATTCAGGAG;MAPQ=60;MATEID=600483:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_11_86534001_86559001_130C;SPAN=1037596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:15:5.1:56.1,5.1,0:15:5:-56.11:56.11
11	85506693	600484:1	G	G]11:86543942]	35	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=600484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:85506693(+)-11:86543942(+)__11_86534001_86559001D;SPAN=1037249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78
11	86543942	600484:2	C	C]11:85506693]	35	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=600484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:85506693(+)-11:86543942(+)__11_86534001_86559001D;SPAN=1037249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78
11	86544042	600483:2	C	[11:85506446[C	56	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTATTTCTGCCTTTATTTCATTATGTACCCAGTAATCATTCAGGAG;MAPQ=60;MATEID=600483:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_11_86534001_86559001_130C;SPAN=1037596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:15:5.1:56.1,5.1,0:15:5:-56.11:56.11
11	86686540	600538:2	A	A[4:130410267[	30	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=600538:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:130410267(-)-11:86686540(+)__11_86681001_86706001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:22:23.6:30.2,0,23.6:0:11:-30.15:30.15
11	86852881	600590:2	T	T]11:45798229]	46	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=600590:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:45798229(+)-11:86852881(+)__11_86852501_86877501D;SPAN=41054652;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21
11	90222202	601482:1	A	]11:90222426]A	8	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=601482:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_90209001_90234001_9C;SPAN=224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:29:8.3:8.3,0,64.4:5:0:-8.353:10.88
11	90222426	601482:2	A	A[11:90222202[	8	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=601482:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_90209001_90234001_9C;SPAN=224;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:29:8.3:8.3,0,64.4:5:0:-8.353:10.88
11	91132847	601769:1	T	T[11:91134495[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAAAATATTTAAAAACATTTAAA;MAPQ=60;MATEID=601769:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_91115501_91140501_2C;SPAN=1648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:8:7:-40.41:40.41
11	91134495	601769:2	A	]11:91132847]A	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAAAATATTTAAAAACATTTAAA;MAPQ=60;MATEID=601769:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_91115501_91140501_2C;SPAN=1648;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:8:7:-40.41:40.41
11	92076576	601925:1	G	]11:92094632]G	22	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=601925:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:92076576(-)-11:92094632(+)__11_92071001_92096001D;SPAN=18056;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
11	92094632	601925:2	A	A[11:92076576[	22	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=601925:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:92076576(-)-11:92094632(+)__11_92071001_92096001D;SPAN=18056;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
11	92329739	601999:1	A	A]Un_JTFH01000460v1_decoy:1678]	33	PASS	EVDNC=ASSMB;HOMSEQ=TTTTTATTTAATAAGAGCTCTTTATTTTTAGGGA;MAPQ=60;MATEID=601999:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_92316001_92341001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:8:3:33,3,0:11:0:-33.01:33.01
11	92329739	601998:1	A	[Un_KN707678v1_decoy:1[A	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=601998:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_92316001_92341001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21
11	93288079	602178:1	T	T[11:93288986[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=602178:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:93288079(+)-11:93288986(-)__11_93271501_93296501D;SPAN=907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
11	93288986	602178:2	A	]11:93288079]A	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=602178:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:93288079(+)-11:93288986(-)__11_93271501_93296501D;SPAN=907;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
11	93946078	602374:1	T	T[11:93948258[	79	PASS	EVDNC=ASSMB;HOMSEQ=GCCTGTTGGATTCTT;MAPQ=60;MATEID=602374:2;MATENM=6;NM=6;NUMPARTS=2;SCTG=c_11_93933001_93958001_7C;SPAN=2180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22
11	93948258	602374:2	G	]11:93946078]G	79	PASS	EVDNC=ASSMB;HOMSEQ=GCCTGTTGGATTCTT;MAPQ=60;MATEID=602374:1;MATENM=6;NM=6;NUMPARTS=2;SCTG=c_11_93933001_93958001_7C;SPAN=2180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22
11	94734090	602559:1	T	]11:94920235]T	29	PASS	EVDNC=ASSMB;INSERTION=ATGAA;MAPQ=60;MATEID=602559:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94913001_94938001_11C;SPAN=186145;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
11	94893362	602552:1	C	C[11:94897268[	20	PASS	EVDNC=ASSMB;INSERTION=CAAA;MAPQ=60;MATEID=602552:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94888501_94913501_5C;SPAN=3906;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63
11	94897268	602552:2	T	]11:94893362]T	20	PASS	EVDNC=ASSMB;INSERTION=CAAA;MAPQ=60;MATEID=602552:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94888501_94913501_5C;SPAN=3906;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63
11	94920235	602559:2	A	A[11:94734090[	29	PASS	EVDNC=ASSMB;INSERTION=ATGAA;MAPQ=60;MATEID=602559:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94913001_94938001_11C;SPAN=186145;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
11	95633480	602711:1	G	G]11:95634028]	37	PASS	EVDNC=ASSMB;INSERTION=TATACTCAA;MAPQ=60;MATEID=602711:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_11_95623501_95648501_10C;SPAN=548;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93
11	95634028	602711:2	A	A]11:95633480]	37	PASS	EVDNC=ASSMB;INSERTION=TATACTCAA;MAPQ=60;MATEID=602711:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_11_95623501_95648501_10C;SPAN=548;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93
11	96004715	602819:2	T	[1:106943617[T	66	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=602819:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_95991001_96016001_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:12:6:66,6,0:18:14:-66.02:66.02
11	99733408	603835:2	C	[5:149173741[C	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=603835:1;MATENM=0;NM=13;NUMPARTS=2;SCTG=c_11_99715001_99740001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:9:6:-42.91:42.91
11	99819848	603886:1	A	A]11:99820649]	81	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=603886:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:99819848(+)-11:99820649(+)__11_99813001_99838001D;SPAN=801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:39:15.5:81.5,0,15.5:0:28:-83.87:83.87
11	99820649	603886:2	A	A]11:99819848]	81	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=603886:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:99819848(+)-11:99820649(+)__11_99813001_99838001D;SPAN=801;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:39:15.5:81.5,0,15.5:0:28:-83.87:83.87
11	103330539	385665:2	A	]7:32186402]A	53	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=385665:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_32168501_32193501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:9:11:-55.29:55.29
11	104139755	605101:1	C	C[11:104140090[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAAATAAC;MAPQ=60;MATEID=605101:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_11_104125001_104150001_1C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:21:13.2:145.2,13.2,0:37:18:-145.2:145.2
11	104140090	605101:2	A	]11:104139755]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAAATAAC;MAPQ=60;MATEID=605101:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_11_104125001_104150001_1C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:21:13.2:145.2,13.2,0:37:18:-145.2:145.2
11	104397023	605173:1	A	A[11:104402502[	69	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=605173:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_104394501_104419501_2C;SPAN=5479;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32
11	104402502	605173:2	A	]11:104397023]A	69	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=605173:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_104394501_104419501_2C;SPAN=5479;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32
11	104457529	605189:1	G	G[11:104458049[	27	PASS	EVDNC=ASSMB;INSERTION=AAATGG;MAPQ=60;MATEID=605189:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_104443501_104468501_0C;SPAN=520;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73
11	104458049	605189:2	C	]11:104457529]C	27	PASS	EVDNC=ASSMB;INSERTION=AAATGG;MAPQ=60;MATEID=605189:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_104443501_104468501_0C;SPAN=520;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73
11	106272375	605556:1	C	[11:106273063[C	66	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=AATAATAGTCTAATTTTCTCTTGGTAGTCCAGATCACTATCCCCAACCAACACTGTAACTCCCTTCTTAGACTGTTGAATCAGAGGCTTGAGGGACATAAAGTGTAAACATGTATAATATTATATATAATATATAATATAATTGT;INSERTION=AGGGACATAAAGTGTAAACATGTATAATATTATA;MAPQ=60;MATEID=605556:2;MATENM=2;NM=2;NUMPARTS=3;REPSEQ=GGG;SCTG=c_11_106256501_106281501_13C;SPAN=688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:24:3.3:66,3.3,0:20:5:-67.03:67.03
11	106273063	605556:2	T	[11:106272375[T	66	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AATAATAGTCTAATTTTCTCTTGGTAGTCCAGATCACTATCCCCAACCAACACTGTAACTCCCTTCTTAGACTGTTGAATCAGAGGCTTGAGGGACATAAAGTGTAAACATGTATAATATTATATATAATATATAATATAATTGT;INSERTION=AGGGACATAAAGTGTAAACATGTATAATATTATA;MAPQ=60;MATEID=605556:1;MATENM=2;NM=2;NUMPARTS=3;REPSEQ=GGG;SCTG=c_11_106256501_106281501_13C;SPAN=688;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:24:3.3:66,3.3,0:20:5:-67.03:67.03
11	107280913	605801:1	A	[11:107298910[A	23	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=605801:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:107280913(-)-11:107298910(-)__11_107285501_107310501D;SPAN=17997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:1:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	107298910	605801:2	T	[11:107280913[T	23	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=605801:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:107280913(-)-11:107298910(-)__11_107285501_107310501D;SPAN=17997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:1:2.1:23.1,2.1,0:0:8:-23.11:23.11
11	117134598	608060:1	A	A]11:117210072]	56	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=608060:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:117134598(+)-11:117210072(+)__11_117208001_117233001D;SPAN=75474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:14:5.1:56.1,5.1,0:0:19:-56.11:56.11
11	117210072	608060:2	T	T]11:117134598]	56	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=608060:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:117134598(+)-11:117210072(+)__11_117208001_117233001D;SPAN=75474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:14:5.1:56.1,5.1,0:0:19:-56.11:56.11
11	117255064	608067:2	C	[11:56497246[C	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=608067:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_117232501_117257501_23C;SPAN=60757818;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:8:11:-42.92:42.92
11	117515381	608868:1	T	]11:119023562]T	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGACTAGCC;MAPQ=60;MATEID=608868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_119021001_119046001_15C;SPAN=1508181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:6:8:-29.28:29.3
11	118947887	608808:1	A	]11:118948030]A	33	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=608808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_118947501_118972501_56C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:70:33.2:33.2,0,142.1:16:0:-33.14:37.03
11	118948030	608808:2	T	T[11:118947887[	33	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=608808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_118947501_118972501_56C;SPAN=143;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:70:33.2:33.2,0,142.1:16:0:-33.14:37.03
11	119023562	608868:2	T	T[11:117515381[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGACTAGCC;MAPQ=60;MATEID=608868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_119021001_119046001_15C;SPAN=1508181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:6:8:-29.28:29.3
11	119253540	608936:2	C	[11:73967021[C	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=CATGCACCACCACACCCAGCTAA;MAPQ=60;MATEID=608936:1;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=TTT;SCTG=c_11_119241501_119266501_36C;SPAN=45286519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:15:11.4:125.4,11.4,0:37:7:-125.4:125.4
11	119486278	609005:1	A	A[11:119486553[	99	PASS	EVDNC=ASSMB;INSERTION=CCTCTGCCCCTCACCTCTGTCTCTGGGTCTTTGCCACCTGCCTCCTCCTTTCCTCCCTCCTGGACCTGCTTTCCCTCTCACTTGCTGAAGATGAGGCCCCACCACTCTTGCTTTGATGAAATCATCCATTTATGTGTTTAATCTTATAGTATTATATGCATTCTTTTACATGATTTCAAAATCTTTTGGCAGCAAAATATGCATAAATGACTGCTTATAGATGAATGCACGTGCACGTGTGTGTTTGGGGAGGGGGT;MAPQ=60;MATEID=609005:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_11_119486501_119511501_30C;SPAN=275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:61:14:16.8:184.8,16.8,0:61:0:-184.8:184.8
11	119486553	609005:2	G	]11:119486278]G	99	PASS	EVDNC=ASSMB;INSERTION=CCTCTGCCCCTCACCTCTGTCTCTGGGTCTTTGCCACCTGCCTCCTCCTTTCCTCCCTCCTGGACCTGCTTTCCCTCTCACTTGCTGAAGATGAGGCCCCACCACTCTTGCTTTGATGAAATCATCCATTTATGTGTTTAATCTTATAGTATTATATGCATTCTTTTACATGATTTCAAAATCTTTTGGCAGCAAAATATGCATAAATGACTGCTTATAGATGAATGCACGTGCACGTGTGTGTTTGGGGAGGGGGT;MAPQ=60;MATEID=609005:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_11_119486501_119511501_30C;SPAN=275;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:61:14:16.8:184.8,16.8,0:61:0:-184.8:184.8
11	128967524	611508:1	G	]11:129745642]G	72	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=611508:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_129727501_129752501_2C;SPAN=778118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:24:6.6:72.6,6.6,0:24:0:-72.62:72.62
11	129051675	611288:2	G	[3:128657391[G	17	PASS	DISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=GGCTGGG;MAPQ=60;MATEID=611288:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_129041501_129066501_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:19:17.9:17.9,0,27.8:4:3:-17.77:17.94
11	129745642	611508:2	A	A[11:128967524[	72	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=611508:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_129727501_129752501_2C;SPAN=778118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:24:6.6:72.6,6.6,0:24:0:-72.62:72.62
11	134934947	612620:1	T	T[11:134936118[	52	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=612620:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:134934947(+)-11:134936118(-)__11_134921501_134946501D;SPAN=1171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:0:18:-52.81:52.81
11	134936118	612620:2	C	]11:134934947]C	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=612620:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:134934947(+)-11:134936118(-)__11_134921501_134946501D;SPAN=1171;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:11:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	520552	612793:1	T	]12:520645]T	50	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=612793:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_12_514501_539501_7C;SPAN=93;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33
12	520645	612793:2	G	G[12:520552[	50	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=612793:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_12_514501_539501_7C;SPAN=93;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33
12	6429248	614235:1	G	G[12:6429610[	42	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCCGCCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=614235:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_12_6419001_6444001_4C;SPAN=362;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:10:5:-42.91:42.91
12	6429610	614235:2	G	]12:6429248]G	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCCGCCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=614235:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_12_6419001_6444001_4C;SPAN=362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:10:5:-42.91:42.91
12	7083306	614416:1	T	]12:7083723]T	46	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=614416:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:7083306(-)-12:7083723(+)__12_7080501_7105501D;SPAN=417;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21
12	7083723	614416:2	N	N[12:7083306[	46	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=614416:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:7083306(-)-12:7083723(+)__12_7080501_7105501D;SPAN=417;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21
12	7677446	614599:1	T	[18:46441888[T	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGCCC;MAPQ=60;MATEID=614599:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_7668501_7693501_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:8:3:33,3,0:9:6:-33.01:33.01
12	8307812	189995:2	T	]3:130167162]T	23	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=189995:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167162(+)-12:8307812(-)__3_130144001_130169001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11
12	8308047	614848:2	T	T[3:130167390[	22	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=614848:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167390(-)-12:8308047(+)__12_8305501_8330501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
12	8864256	615005:1	T	T[12:8865272[	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTCATGCCTGT;MAPQ=60;MATEID=615005:2;MATENM=6;NM=25;NUMPARTS=2;SCTG=c_12_8844501_8869501_10C;SPAN=1016;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:5:5.7:62.7,5.7,0:15:9:-62.72:62.72
12	8865272	615005:2	G	]12:8864256]G	62	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GCTCATGCCTGT;MAPQ=60;MATEID=615005:1;MATENM=25;NM=6;NUMPARTS=2;SCTG=c_12_8844501_8869501_10C;SPAN=1016;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:5:5.7:62.7,5.7,0:15:9:-62.72:62.72
12	9319621	615195:1	G	G]12:9412218]	29	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=615195:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9319621(+)-12:9412218(+)__12_9408001_9433001D;SPAN=92597;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
12	9405219	615188:1	T	T[12:9406080[	56	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=615188:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9405219(+)-12:9406080(-)__12_9383501_9408501D;SPAN=861;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11
12	9406080	615188:2	C	]12:9405219]C	56	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=615188:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9405219(+)-12:9406080(-)__12_9383501_9408501D;SPAN=861;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11
12	9412218	615195:2	T	T]12:9319621]	29	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=615195:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9319621(+)-12:9412218(+)__12_9408001_9433001D;SPAN=92597;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08
12	9480168	620653:1	G	G]12:31201038]	26	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=620653:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9480168(+)-12:31201038(+)__12_31188501_31213501D;SPAN=21720870;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
12	12653308	616055:1	G	[Un_KN707783v1_decoy:1[G	42	PASS	EVDNC=ASSMB;HOMSEQ=GGCATGGTGGCTCACGCCTGTA;MAPQ=60;MATEID=616055:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_12642001_12667001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91
12	14323917	616477:1	T	]X:38199383]T	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGAGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGG;MAPQ=60;MATEID=616477:2;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_12_14308001_14333001_21C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:7:3.3:36.3,3.3,0:6:7:-36.31:36.31
12	17463563	617131:1	A	A[12:17464684[	52	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=617131:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:17463563(+)-12:17464684(-)__12_17444001_17469001D;SPAN=1121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:3:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	17464684	617131:2	C	]12:17463563]C	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=617131:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:17463563(+)-12:17464684(-)__12_17444001_17469001D;SPAN=1121;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:3:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	25803192	619289:1	G	[12:125316601[G	52	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=619289:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:25803192(-)-12:125316601(-)__12_25798501_25823501D;SPAN=99513409;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	28908761	620046:1	A	]12:28908886]A	72	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=620046:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_28885501_28910501_8C;SPAN=125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:37:19.4:72.2,0,19.4:25:0:-73.68:73.68
12	28908886	620046:2	T	T[12:28908761[	72	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=620046:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_28885501_28910501_8C;SPAN=125;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:37:19.4:72.2,0,19.4:25:0:-73.68:73.68
12	30591611	620496:1	T	T[12:30593306[	23	PASS	EVDNC=ASSMB;INSERTION=CC;MAPQ=60;MATEID=620496:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_12_30576001_30601001_5C;SPAN=1695;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:8:0:-23.11:23.11
12	30593306	620496:2	A	]12:30591611]A	23	PASS	EVDNC=ASSMB;INSERTION=CC;MAPQ=60;MATEID=620496:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_12_30576001_30601001_5C;SPAN=1695;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:8:0:-23.11:23.11
12	31201038	620653:2	A	A]12:9480168]	26	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=620653:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9480168(+)-12:31201038(+)__12_31188501_31213501D;SPAN=21720870;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69
12	32891138	621190:1	A	[12:32906808[A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=621190:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_32903501_32928501_118C;SPAN=15670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:13:6:-50.74:50.74
12	32906808	621190:2	A	[12:32891138[A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=621190:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_32903501_32928501_118C;SPAN=15670;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:24:9.8:49.4,0,9.8:13:6:-50.74:50.74
12	33009535	621284:1	C	[12:33119661[C	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=621284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33099501_33124501_61C;SPAN=110126;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:28:1.2:72.6,1.2,0:16:12:-76:76
12	33118851	626174:1	A	A]12:45341570]	36	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=626174:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33118851(+)-12:45341570(+)__12_45325001_45350001D;SPAN=12222719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31
12	33119661	621284:2	A	[12:33009535[A	72	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=621284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33099501_33124501_61C;SPAN=110126;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:28:1.2:72.6,1.2,0:16:12:-76:76
12	33574300	621458:1	C	C[12:33574572[	10	PASS	EVDNC=ASSMB;HOMSEQ=GGGTGGC;MAPQ=60;MATEID=621458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33565001_33590001_95C;SPAN=272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:47:10.1:10.1,0,105.8:7:0:-9.896:14.75
12	33574572	621458:2	G	]12:33574300]G	10	PASS	EVDNC=ASSMB;HOMSEQ=GGGTGGC;MAPQ=60;MATEID=621458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33565001_33590001_95C;SPAN=272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:47:10.1:10.1,0,105.8:7:0:-9.896:14.75
12	33700205	621491:1	A	A[12:33700420[	64	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=621491:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_33687501_33712501_40C;SPAN=215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:29:8.3:64.4,0,8.3:22:0:-66.94:66.94
12	33700420	621491:2	A	]12:33700205]A	64	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=621491:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_33687501_33712501_40C;SPAN=215;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:29:8.3:64.4,0,8.3:22:0:-66.94:66.94
12	33864471	669322:1	G	G]13:48282773]	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=669322:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33864471(+)-13:48282773(+)__13_48265001_48290001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
12	33946461	621610:1	A	A[12:33952570[	29	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=621610:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_33932501_33957501_126C;SPAN=6109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:6:9:-29.49:30.1
12	33946492	630191:1	G	[12:59699013[G	66	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=630191:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_59682001_59707001_18C;SPAN=25752521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:19:8:-66.02:66.02
12	33947951	627288:1	A	A[12:49261288[	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=627288:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49245001_49270001_33C;SPAN=15313337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
12	33952570	621610:2	A	]12:33946461]A	29	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=621610:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_33932501_33957501_126C;SPAN=6109;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:36:29.6:29.6,0,59.3:6:9:-29.49:30.1
12	34680752	621866:1	T	]12:34681291]T	8	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATGGTAGAAAAGGAAATATCTTCATA;MAPQ=0;MATEID=621866:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_97C;SPAN=539;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:75:8.6:8.6,0,180.2:3:6:-8.627:18.06
12	34681291	621866:2	A	A[12:34680752[	8	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TATGGTAGAAAAGGAAATATCTTCATA;MAPQ=48;MATEID=621866:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_97C;SPAN=539;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:75:8.6:8.6,0,180.2:3:6:-8.627:18.06
12	34692129	621876:1	T	T[12:34696203[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTTTGTGATGTGTGCATTCAACTCACAGAGTTTAACCTT;MAPQ=60;MATEID=621876:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_34667501_34692501_252C;SPAN=4074;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:8:7:-36.31:36.31
12	34696203	621876:2	C	]12:34692129]C	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTTTGTGATGTGTGCATTCAACTCACAGAGTTTAACCTT;MAPQ=60;MATEID=621876:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_252C;SPAN=4074;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:8:7:-36.31:36.31
12	34775495	621965:1	T	]12:34802522]T	99	PASS	DISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=TATCTTCGTATAAAAACTAGACAGAATCATTCT;MAPQ=51;MATEID=621965:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_34790001_34815001_170C;SPAN=27027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:7:10.8:118.8,10.8,0:36:3:-118.8:118.8
12	34797611	621973:1	T	T[12:34804209[	31	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=621973:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:34797611(+)-12:34804209(-)__12_34790001_34815001D;SPAN=6598;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78
12	34802522	621965:2	T	T[12:34775495[	99	PASS	DISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=TATCTTCGTATAAAAACTAGACAGAATCATTCT;MAPQ=60;MATEID=621965:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_34790001_34815001_170C;SPAN=27027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:7:10.8:118.8,10.8,0:36:3:-118.8:118.8
12	34804209	621973:2	C	]12:34797611]C	31	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=621973:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:34797611(+)-12:34804209(-)__12_34790001_34815001D;SPAN=6598;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78
12	35065508	622080:1	G	G[12:36036026[	69	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=622080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35065508(+)-12:36036026(-)__12_35059501_35084501D;SPAN=970518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
12	35279799	622381:1	G	G[12:36171543[	23	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=622381:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35279799(+)-12:36171543(-)__12_36162001_36187001D;SPAN=891744;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
12	35320953	622592:1	G	G[12:36636654[	46	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=622592:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35320953(+)-12:36636654(-)__12_36627501_36652501D;SPAN=1315701;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:0:16:-46.21:46.21
12	35482224	622730:1	A	A[12:37010815[	36	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=622730:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35482224(+)-12:37010815(-)__12_36995001_37020001D;SPAN=1528591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:0:12:-38:38
12	35633983	622566:1	T	T[12:36580436[	22	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=622566:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35633983(+)-12:36580436(-)__12_36578501_36603501D;SPAN=946453;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
12	36036026	622080:2	C	]12:35065508]C	69	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=622080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35065508(+)-12:36036026(-)__12_35059501_35084501D;SPAN=970518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32
12	36146423	622547:1	A	]12:36542570]A	34	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=622547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36146423(-)-12:36542570(+)__12_36529501_36554501D;SPAN=396147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:0:13:-34.2:34.27
12	36170378	622749:1	T	]12:37023657]T	39	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=622749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36170378(-)-12:37023657(+)__12_37019501_37044501D;SPAN=853279;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:3:3.6:39.6,3.6,0:0:13:-39.61:39.61
12	36171543	622381:2	A	]12:35279799]A	23	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=622381:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35279799(+)-12:36171543(-)__12_36162001_36187001D;SPAN=891744;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
12	36386608	622795:1	A	]12:37141680]A	42	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=622795:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36386608(-)-12:37141680(+)__12_37117501_37142501D;SPAN=755072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
12	36542570	622547:2	A	A[12:36146423[	34	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36146423(-)-12:36542570(+)__12_36529501_36554501D;SPAN=396147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:0:13:-34.2:34.27
12	36580436	622566:2	A	]12:35633983]A	22	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=622566:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35633983(+)-12:36580436(-)__12_36578501_36603501D;SPAN=946453;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
12	36636654	622592:2	C	]12:35320953]C	46	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622592:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35320953(+)-12:36636654(-)__12_36627501_36652501D;SPAN=1315701;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:0:16:-46.21:46.21
12	37010815	622730:2	T	]12:35482224]T	36	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=622730:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35482224(+)-12:37010815(-)__12_36995001_37020001D;SPAN=1528591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:0:12:-38:38
12	37023657	622749:2	A	A[12:36170378[	39	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36170378(-)-12:37023657(+)__12_37019501_37044501D;SPAN=853279;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:3:3.6:39.6,3.6,0:0:13:-39.61:39.61
12	37141680	622795:2	A	A[12:36386608[	42	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=622795:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36386608(-)-12:37141680(+)__12_37117501_37142501D;SPAN=755072;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
12	37253832	622864:1	C	]12:37255340]C	37	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=622864:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37253832(-)-12:37255340(+)__12_37240001_37265001D;SPAN=1508;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44
12	37255340	622864:2	N	N[12:37253832[	37	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=622864:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37253832(-)-12:37255340(+)__12_37240001_37265001D;SPAN=1508;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44
12	37258962	622868:1	A	]12:37261422]A	13	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=622868:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37258962(-)-12:37261422(+)__12_37240001_37265001D;SPAN=2460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36
12	37261422	622868:2	G	G[12:37258962[	13	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=622868:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37258962(-)-12:37261422(+)__12_37240001_37265001D;SPAN=2460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36
12	37333223	623069:1	N	N[12:37334767[	99	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=CTTTTGATAGAGCAGTTTTGAAACACTGCTTTTGTAGAATCTGCTTGTGGATATACGGAACTGTTTGAGGAATTCGTTGTAAACGCAATATCTTCACATGCAAACTAGACGGAAGCATTCTCAGAAACTTCTTTGTGATGTGTACATTGAACGCACAGACTTGAACATTCCTTTTGAG;INSERTION=AGAGCAGTTTCGAAACAGTGTTTTTATAGTATCTGCAAGAGGATATGTGGAACGTTTTGAGGCCTATGATGGAAAAGGAAATATCTTCACATAAATACTAGATAGAAGCATTCTCACCAACTGCTTTGTGGTGTACGCATTCATCTGACAGAGTGGAACCCTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTAGAATCTGCAAGTGTTCAGTTAGAGCACTTTGAGGCCTATGTTGGAAAAAGAAAT;MAPQ=60;MATEID=623069:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_12_37313501_37338501_237C;SECONDARY;SPAN=1544;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:11:13.2:145.2,13.2,0:46:5:-145.2:145.2
12	37334767	623069:2	N	]12:37333223]N	99	PASS	DISC_MAPQ=52;EVDNC=TSI_G;HOMSEQ=CTTTTGATAGAGCAGTTTTGAAACACTGCTTTTGTAGAATCTGCTTGTGGATATACGGAACTGTTTGAGGAATTCGTTGTAAACGCAATATCTTCACATGCAAACTAGACGGAAGCATTCTCAGAAACTTCTTTGTGATGTGTACATTGAACGCACAGACTTGAACATTCCTTTTGAG;INSERTION=AGAGCAGTTTCGAAACAGTGTTTTTATAGTATCTGCAAGAGGATATGTGGAACGTTTTGAGGCCTATGATGGAAAAGGAAATATCTTCACATAAATACTAGATAGAAGCATTCTCACCAACTGCTTTGTGGTGTACGCATTCATCTGACAGAGTGGAACCCTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTAGAATCTGCAAGTGTTCAGTTAGAGCACTTTGAGGCCTATGTTGGAAAAAGAAAT;MAPQ=60;MATEID=623069:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_12_37313501_37338501_237C;SECONDARY;SPAN=1544;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:48:11:13.2:145.2,13.2,0:46:5:-145.2:145.2
12	37365284	623185:1	A	A[12:37367892[	44	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=623185:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37365284(+)-12:37367892(-)__12_37362501_37387501D;SPAN=2608;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:19:1.4:44.3,0,1.4:0:15:-46.2:46.2
12	37367892	623185:2	T	]12:37365284]T	44	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=623185:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37365284(+)-12:37367892(-)__12_37362501_37387501D;SPAN=2608;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:19:1.4:44.3,0,1.4:0:15:-46.2:46.2
12	37597426	623343:1	T	T[12:37600816[	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAGCAGTTTTGAAACACT;MAPQ=60;MATEID=623343:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_37583001_37608001_116C;SPAN=3390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:9:5:-41.11:41.11
12	37600816	623343:2	A	]12:37597426]A	40	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAGCAGTTTTGAAACACT;MAPQ=60;MATEID=623343:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_37583001_37608001_116C;SPAN=3390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:9:5:-41.11:41.11
12	37616372	623373:1	T	T[12:37624294[	33	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAATGCTTTGAGGCCT;MAPQ=0;MATEID=623373:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_37607501_37632501_47C;SPAN=7922;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:6:10:-33.36:33.58
12	37624294	623373:2	A	]12:37616372]A	33	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAATGCTTTGAGGCCT;MAPQ=60;MATEID=623373:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_37607501_37632501_47C;SPAN=7922;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:6:10:-33.36:33.58
12	37828951	623821:1	G	]12:37833257]G	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=623821:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37828951(-)-12:37833257(+)__12_37828001_37853001D;SPAN=4306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:57:55:15.9:174.9,15.9,0:0:57:-174.9:174.9
12	37833257	623821:2	G	G[12:37828951[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=623821:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37828951(-)-12:37833257(+)__12_37828001_37853001D;SPAN=4306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:57:55:15.9:174.9,15.9,0:0:57:-174.9:174.9
12	37924184	623856:1	T	[12:37924724[T	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=623856:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_37901501_37926501_41C;SPAN=540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:41:38:38,0,64.4:12:10:-37.99:38.38
12	37924724	623856:2	T	[12:37924184[T	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=623856:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_37901501_37926501_41C;SPAN=540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:41:38:38,0,64.4:12:10:-37.99:38.38
12	39152300	926030:1	C	[X:11714300[C	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTTAGCAGC;MAPQ=60;MATEID=926030:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_11711001_11736001_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:21:14:14,0,37.1:3:6:-13.9:14.56
12	39714095	624468:1	A	]12:39714154]A	46	PASS	EVDNC=ASSMB;INSERTION=GTATGTATACGTGTATATGTATATATGTACATACGTATAT;MAPQ=60;MATEID=624468:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_39690001_39715001_31C;SPAN=59;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:36:42.8:46.1,0,42.8:17:0:-46:46
12	39714154	624468:2	C	C[12:39714095[	46	PASS	EVDNC=ASSMB;INSERTION=GTATGTATACGTGTATATGTATATATGTACATACGTATAT;MAPQ=60;MATEID=624468:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_39690001_39715001_31C;SPAN=59;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:36:42.8:46.1,0,42.8:17:0:-46:46
12	39761555	624525:1	T	]12:39850525]T	46	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TTAATTAATTGCTATATATGACTAATTAAGATATA;MAPQ=60;MATEID=624525:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_39837001_39862001_14C;SPAN=88970;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:11:7:-46.21:46.21
12	39850525	624525:2	A	A[12:39761555[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTAATTGCTATATATGACTAATTAAGATATA;MAPQ=60;MATEID=624525:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_39837001_39862001_14C;SPAN=88970;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:11:7:-46.21:46.21
12	39931333	624573:1	A	A[12:40006564[	52	PASS	EVDNC=ASSMB;INSERTION=TGCCTAATGCCTGCTACTAAATGCCTACTACTAATGCCTGCTACTAATGCCTGCTAC;MAPQ=60;MATEID=624573:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_39984001_40009001_12C;SPAN=75231;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:15:4.8:52.8,4.8,0:18:0:-52.81:52.81
12	40006564	624573:2	T	]12:39931333]T	52	PASS	EVDNC=ASSMB;INSERTION=TGCCTAATGCCTGCTACTAAATGCCTACTACTAATGCCTGCTACTAATGCCTGCTAC;MAPQ=60;MATEID=624573:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_39984001_40009001_12C;SPAN=75231;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:15:4.8:52.8,4.8,0:18:0:-52.81:52.81
12	40480965	624749:1	A	A[12:40482623[	44	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGGAGTGA;MAPQ=16;MATEID=624749:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_40474001_40499001_228C;SPAN=1658;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:41:44.6:44.6,0,57.8:6:14:-44.59:44.7
12	40482173	624751:1	C	]12:40485152]C	34	PASS	EVDNC=ASSMB;HOMSEQ=CAGGAACAACTGGATT;MAPQ=60;MATEID=624751:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_40474001_40499001_66C;SPAN=2979;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03
12	40482623	624749:2	C	]12:40480965]C	44	PASS	DISC_MAPQ=50;EVDNC=ASDIS;INSERTION=GCTGGAGTGA;MAPQ=60;MATEID=624749:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_40474001_40499001_228C;SPAN=1658;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:41:44.6:44.6,0,57.8:6:14:-44.59:44.7
12	40485152	624751:2	T	T[12:40482173[	34	PASS	EVDNC=ASSMB;HOMSEQ=CAGGAACAACTGGATT;MAPQ=60;MATEID=624751:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_40474001_40499001_66C;SPAN=2979;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03
12	40749548	624895:1	G	G[12:40749805[	49	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=624895:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_40743501_40768501_23C;SPAN=257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
12	40749805	624895:2	G	]12:40749548]G	49	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=624895:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_40743501_40768501_23C;SPAN=257;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51
12	42898157	400359:2	C	[7:65418509[C	75	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=400359:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418509(-)-12:42898157(-)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92
12	42898470	400358:2	G	G]7:65418384]	52	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=400358:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418384(+)-12:42898470(+)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:6:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	43583657	625822:1	A	A[12:43585747[	42	PASS	EVDNC=ASSMB;HOMSEQ=AAGACATTCCA;MAPQ=60;MATEID=625822:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_43585501_43610501_31C;SPAN=2090;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91
12	43585747	625822:2	A	]12:43583657]A	42	PASS	EVDNC=ASSMB;HOMSEQ=AAGACATTCCA;MAPQ=60;MATEID=625822:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_43585501_43610501_31C;SPAN=2090;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91
12	45341570	626174:2	T	T]12:33118851]	36	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=626174:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33118851(+)-12:45341570(+)__12_45325001_45350001D;SPAN=12222719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31
12	45509370	626202:1	A	A[12:45516157[	85	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=626202:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_12_45496501_45521501_3C;SPAN=6787;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	45516157	626202:2	T	]12:45509370]T	85	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=626202:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_12_45496501_45521501_3C;SPAN=6787;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	46181222	626399:1	T	]12:46213999]T	42	PASS	EVDNC=ASSMB;INSERTION=CCATGATC;MAPQ=60;MATEID=626399:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_46207001_46232001_27C;SPAN=32777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
12	46213999	626399:2	A	A[12:46181222[	42	PASS	EVDNC=ASSMB;INSERTION=CCATGATC;MAPQ=60;MATEID=626399:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_46207001_46232001_27C;SPAN=32777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
12	48331698	627120:1	T	T[12:48334598[	19	PASS	EVDNC=ASSMB;HOMSEQ=GTAATTAAGTTTATT;MAPQ=60;MATEID=627120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_48314001_48339001_68C;SPAN=2900;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
12	48334598	627120:2	G	]12:48331698]G	19	PASS	EVDNC=ASSMB;HOMSEQ=GTAATTAAGTTTATT;MAPQ=60;MATEID=627120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_48314001_48339001_68C;SPAN=2900;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
12	49261288	627288:2	C	]12:33947951]C	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=627288:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49245001_49270001_33C;SPAN=15313337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67
12	49498997	187839:2	G	G[3:122934047[	29	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=187839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:122934047(-)-12:49498997(+)__3_122916501_122941501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
12	49788828	627372:1	C	C]12:49789140]	79	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TGAACCCAGGAGG;INSERTION=CAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCG;MAPQ=60;MATEID=627372:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_12_49784001_49809001_96C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:26:7.2:79.2,7.2,0:19:8:-79.22:79.22
12	49789140	627372:2	A	A]12:49788828]	79	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TGAACCCAGGAGG;INSERTION=CAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCG;MAPQ=60;MATEID=627372:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_12_49784001_49809001_96C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:26:7.2:79.2,7.2,0:19:8:-79.22:79.22
12	49877510	627407:1	A	]12:49877621]A	81	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=627407:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_49857501_49882501_91C;SPAN=111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:64:77.9:81.2,0,77.9:30:0:-81.04:81.04
12	49877621	627407:2	G	G[12:49877510[	81	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=627407:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_49857501_49882501_91C;SPAN=111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:64:77.9:81.2,0,77.9:30:0:-81.04:81.04
12	49898240	627456:1	C	]12:49898348]C	24	PASS	EVDNC=ASSMB;HOMSEQ=CCCGGCT;MAPQ=60;MATEID=627456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49882001_49907001_9C;SPAN=108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:55:24.2:24.2,0,113.3:12:0:-24.15:27.49
12	49898348	627456:2	T	T[12:49898240[	24	PASS	EVDNC=ASSMB;HOMSEQ=CCCGGCT;MAPQ=60;MATEID=627456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49882001_49907001_9C;SPAN=108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:55:24.2:24.2,0,113.3:12:0:-24.15:27.49
12	50114523	627507:1	A	A[12:50115022[	11	PASS	DISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGA;MAPQ=60;MATEID=627507:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_50102501_50127501_20C;SPAN=499;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:18:11.6:11.6,0,31.4:2:4:-11.45:12.06
12	50115022	627507:2	T	]12:50114523]T	11	PASS	DISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGA;MAPQ=60;MATEID=627507:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_50102501_50127501_20C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:18:11.6:11.6,0,31.4:2:4:-11.45:12.06
12	52355941	628411:1	G	]12:52358129]G	22	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=628411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52332001_52357001_104C;SPAN=2188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
12	52358129	628411:2	G	G[12:52355941[	22	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=628411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52332001_52357001_104C;SPAN=2188;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25
12	52358976	449149:2	A	]8:35555406]A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=449149:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:35555406(+)-12:52358976(-)__8_35549501_35574501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
12	52846424	628594:1	C	]12:53082540]C	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGG;MAPQ=60;MATEID=628594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52846501_52871501_22C;SPAN=236116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:5:7:-33.01:33.01
12	53082540	628594:2	T	T[12:52846424[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGG;MAPQ=12;MATEID=628594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52846501_52871501_22C;SPAN=236116;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:5:7:-33.01:33.01
12	53612036	628841:1	C	C[12:53612319[	3	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=628841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_53606001_53631001_7C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:35:3.5:3.5,0,82.7:4:0:-3.366:7.934
12	53612319	628841:2	C	]12:53612036]C	3	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=628841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_53606001_53631001_7C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:35:3.5:3.5,0,82.7:4:0:-3.366:7.934
12	54231570	629060:1	A	A]12:54239608]	30	PASS	DISC_MAPQ=47;EVDNC=ASDIS;MAPQ=60;MATEID=629060:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_54218501_54243501_67C;SPAN=8038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:7:6:-30.06:30.47
12	54239608	629060:2	T	T]12:54231570]	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=629060:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_54218501_54243501_67C;SPAN=8038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:7:6:-30.06:30.47
12	56596312	629585:1	G	G[15:39702424[	85	PASS	EVDNC=ASSMB;INSERTION=AGCTAGGTGGATTTTCTCTTC;MAPQ=60;MATEID=629585:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_56595001_56620001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	59699013	630191:2	C	[12:33946492[C	66	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=630191:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_59682001_59707001_18C;SPAN=25752521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:19:8:-66.02:66.02
12	60018568	630268:1	T	T[12:60019728[	36	PASS	EVDNC=ASSMB;HOMSEQ=GAAT;MAPQ=50;MATEID=630268:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_60000501_60025501_61C;SPAN=1160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29
12	60019728	630268:2	G	]12:60018568]G	36	PASS	EVDNC=ASSMB;HOMSEQ=GAAT;MAPQ=60;MATEID=630268:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_60000501_60025501_61C;SPAN=1160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29
12	60128185	630298:1	T	T[12:60131254[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=630298:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:60128185(+)-12:60131254(-)__12_60123001_60148001D;SPAN=3069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3
12	60131254	630298:2	A	]12:60128185]A	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=630298:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:60128185(+)-12:60131254(-)__12_60123001_60148001D;SPAN=3069;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3
12	61767342	630769:1	A	[12:61774625[A	59	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTCATTTTTT;MAPQ=60;MATEID=630769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_61764501_61789501_34C;SPAN=7283;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:48:59.3:59.3,0,59.3:18:11:-59.13:59.13
12	61774625	630769:2	A	[12:61767342[A	59	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTCATTTTTT;MAPQ=60;MATEID=630769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_61764501_61789501_34C;SPAN=7283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:48:59.3:59.3,0,59.3:18:11:-59.13:59.13
12	61805169	630789:1	T	]17:59896324]T	17	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=630789:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_61789001_61814001_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
12	62394097	630980:1	A	]12:62450606]A	33	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=630980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_62377001_62402001_36C;SPAN=56509;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:35:33.2:33.2,0,53:11:11:-33.08:33.38
12	62450606	630980:2	A	A[12:62394097[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=630980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_62377001_62402001_36C;SPAN=56509;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:35:33.2:33.2,0,53:11:11:-33.08:33.38
12	62838638	631147:1	C	C[12:62838950[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAATAGCTTCTC;MAPQ=60;MATEID=631147:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_62818001_62843001_7C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:28:9.3:102.3,9.3,0:34:0:-102.3:102.3
12	62838950	631147:2	A	]12:62838638]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATAATAGCTTCTC;MAPQ=60;MATEID=631147:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_62818001_62843001_7C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:28:9.3:102.3,9.3,0:34:0:-102.3:102.3
12	63545291	631382:1	G	G[12:63740374[	17	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=631382:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:63545291(+)-12:63740374(-)__12_63528501_63553501D;SPAN=195083;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
12	63552952	631386:1	G	G[12:63553177[	85	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=631386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_63528501_63553501_13C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	63553177	631386:2	A	]12:63552952]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=631386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_63528501_63553501_13C;SPAN=225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:27:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	63740374	631382:2	T	]12:63545291]T	17	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=631382:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:63545291(+)-12:63740374(-)__12_63528501_63553501D;SPAN=195083;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
12	65229310	632064:1	T	T[12:110829790[	17	PASS	EVDNC=ASSMB;INSERTION=AAG;MAPQ=60;MATEID=632064:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_65219001_65244001_43C;SPAN=45600480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56
12	66737454	632476:1	T	T[12:66738084[	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=632476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_66738001_66763001_6C;SPAN=630;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89
12	66738084	632476:2	A	]12:66737454]A	19	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=632476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_66738001_66763001_6C;SPAN=630;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89
12	69153592	648631:1	A	]12:118295227]A	22	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=648631:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:69153592(-)-12:118295227(+)__12_118286001_118311001D;SPAN=49141635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
12	70201197	633448:1	A	A[12:70203785[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=633448:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70201197(+)-12:70203785(-)__12_70192501_70217501D;SPAN=2588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:25:12:132,12,0:0:43:-132:132
12	70203785	633448:2	A	]12:70201197]A	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633448:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70201197(+)-12:70203785(-)__12_70192501_70217501D;SPAN=2588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:25:12:132,12,0:0:43:-132:132
12	70478576	633549:1	T	T[12:70484436[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633549:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70478576(+)-12:70484436(-)__12_70462001_70487001D;SPAN=5860;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:10:10.5:115.5,10.5,0:0:38:-115.5:115.5
12	70484436	633549:2	T	]12:70478576]T	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633549:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70478576(+)-12:70484436(-)__12_70462001_70487001D;SPAN=5860;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:10:10.5:115.5,10.5,0:0:38:-115.5:115.5
12	71139014	633690:1	A	[12:71139975[A	76	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAAAGTACAAAT;MAPQ=60;MATEID=633690:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_12_71123501_71148501_12C;SPAN=961;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:35:10.1:76.1,0,10.1:14:15:-78.63:78.63
12	71139975	633690:2	T	[12:71139014[T	76	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAAAGTACAAAT;MAPQ=60;MATEID=633690:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_12_71123501_71148501_12C;SPAN=961;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:35:10.1:76.1,0,10.1:14:15:-78.63:78.63
12	71795498	633859:1	T	T[12:71796793[	92	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633859:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:71795498(+)-12:71796793(-)__12_71785001_71810001D;SPAN=1295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:8:8.4:92.4,8.4,0:0:30:-92.42:92.42
12	71796793	633859:2	A	]12:71795498]A	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=633859:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:71795498(+)-12:71796793(-)__12_71785001_71810001D;SPAN=1295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:8:8.4:92.4,8.4,0:0:30:-92.42:92.42
12	71962902	633883:1	A	A[12:71964337[	85	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=633883:2;MATENM=27;NM=11;NUMPARTS=2;SCTG=c_12_71956501_71981501_6C;SPAN=1435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:4:7.8:85.8,7.8,0:4:25:-85.82:85.82
12	71964337	633883:2	C	]12:71962902]C	85	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=633883:1;MATENM=11;NM=27;NUMPARTS=2;SCTG=c_12_71956501_71981501_6C;SPAN=1435;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:4:7.8:85.8,7.8,0:4:25:-85.82:85.82
12	72313309	633922:1	A	A[12:72313827[	18	PASS	EVDNC=ASSMB;INSERTION=CAGATTTCTTCC;MAPQ=60;MATEID=633922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_72299501_72324501_11C;SPAN=518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
12	72313827	633922:2	C	]12:72313309]C	18	PASS	EVDNC=ASSMB;INSERTION=CAGATTTCTTCC;MAPQ=60;MATEID=633922:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_72299501_72324501_11C;SPAN=518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
12	73620587	634200:2	T	]7:125624166]T	75	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATA;MAPQ=60;MATEID=634200:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_12_73598001_73623001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:24:6.9:75.9,6.9,0:24:7:-75.92:75.92
12	74298655	634412:1	A	]12:74480096]A	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=634412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_74480001_74505001_12C;SPAN=181441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:11:11:-43.34:43.34
12	74480096	634412:2	A	A[12:74298655[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=634412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_74480001_74505001_12C;SPAN=181441;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:11:11:-43.34:43.34
12	74567779	634720:1	G	]12:75488812]G	24	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=634720:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_75484501_75509501_20C;SPAN=921033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
12	75488812	634720:2	C	C[12:74567779[	24	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=634720:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_75484501_75509501_20C;SPAN=921033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
12	75757901	634777:1	G	G[12:75764869[	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=634777:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:75757901(+)-12:75764869(-)__12_75754001_75779001D;SPAN=6968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:8:8.4:92.4,8.4,0:0:30:-92.42:92.42
12	75764869	634777:2	A	]12:75757901]A	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=634777:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:75757901(+)-12:75764869(-)__12_75754001_75779001D;SPAN=6968;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:8:8.4:92.4,8.4,0:0:30:-92.42:92.42
12	77990109	635363:1	T	[12:77994064[T	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TTTA;MAPQ=60;MATEID=635363:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_12_77983501_78008501_0C;SPAN=3955;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:52:34:14.4:158.4,14.4,0:41:18:-158.4:158.4
12	77994064	635363:2	T	[12:77990109[T	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TTTA;MAPQ=60;MATEID=635363:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_12_77983501_78008501_0C;SPAN=3955;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:52:34:14.4:158.4,14.4,0:41:18:-158.4:158.4
12	80454444	635863:1	A	[12:80461951[A	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=635863:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:80454444(-)-12:80461951(-)__12_80433501_80458501D;SPAN=7507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
12	80461951	635863:2	G	[12:80454444[G	23	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=635863:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:80454444(-)-12:80461951(-)__12_80433501_80458501D;SPAN=7507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11
12	83565451	636682:1	C	C[12:83565755[	29	PASS	EVDNC=ASSMB;HOMSEQ=AAGACTTGTACTC;MAPQ=60;MATEID=636682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_83545001_83570001_69C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
12	83565755	636682:2	A	]12:83565451]A	29	PASS	EVDNC=ASSMB;HOMSEQ=AAGACTTGTACTC;MAPQ=60;MATEID=636682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_83545001_83570001_69C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
12	83648505	636707:1	T	T[12:83648804[	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAACAAATTT;MAPQ=60;MATEID=636707:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_83643001_83668001_134C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31
12	83648804	636707:2	A	]12:83648505]A	79	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAACAAATTT;MAPQ=60;MATEID=636707:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_83643001_83668001_134C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31
12	84058958	636884:1	C	]12:84059687]C	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=636884:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84059501_84084501_4C;SPAN=729;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:6:10:-38.44:38.44
12	84059687	636884:2	T	T[12:84058958[	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=636884:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84059501_84084501_4C;SPAN=729;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:19:8:37.7,0,8:6:10:-38.44:38.44
12	84199335	636931:1	A	A[12:84202233[	85	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCA;MAPQ=60;MATEID=636931:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84182001_84207001_67C;SPAN=2898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	84202233	636931:2	G	]12:84199335]G	85	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCA;MAPQ=60;MATEID=636931:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84182001_84207001_67C;SPAN=2898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82
12	86129547	637649:1	T	T[12:86129858[	79	PASS	EVDNC=ASSMB;HOMSEQ=CACAATCTTT;MAPQ=60;MATEID=637649:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_86117501_86142501_101C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22
12	86129858	637649:2	C	]12:86129547]C	79	PASS	EVDNC=ASSMB;HOMSEQ=CACAATCTTT;MAPQ=60;MATEID=637649:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_86117501_86142501_101C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22
12	86259796	988096:1	T	]Un_KN707677v1_decoy:7267]T	89	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988096:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_528_1_7267_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12
12	90223562	638867:1	T	]12:90223665]T	48	PASS	EVDNC=ASSMB;HOMSEQ=TATATATCCTATATATATACATATATACTATAGT;MAPQ=35;MATEID=638867:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_90209001_90234001_76C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74
12	90223665	638867:2	T	T[12:90223562[	48	PASS	EVDNC=ASSMB;HOMSEQ=TATATATCCTATATATATACATATATACTATAGT;MAPQ=60;MATEID=638867:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_90209001_90234001_76C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74
12	93500781	640053:1	C	]12:93501896]C	83	PASS	EVDNC=ASSMB;INSERTION=AAATTAAA;MAPQ=60;MATEID=640053:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_93492001_93517001_1C;SPAN=1115;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92
12	93501029	640054:1	G	G[12:93501904[	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=640054:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_12_93492001_93517001_80C;SPAN=875;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:43:7.7:100.1,0,7.7:34:0:-104.8:104.8
12	93501896	640053:2	T	T[12:93500781[	83	PASS	EVDNC=ASSMB;INSERTION=AAATTAAA;MAPQ=60;MATEID=640053:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_93492001_93517001_1C;SPAN=1115;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92
12	93501904	640054:2	G	]12:93501029]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=640054:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_12_93492001_93517001_80C;SPAN=875;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:43:7.7:100.1,0,7.7:34:0:-104.8:104.8
12	93964568	640176:1	G	G[12:93964865[	25	PASS	EVDNC=ASSMB;HOMSEQ=AGAATTAGGAGCTGGG;MAPQ=60;MATEID=640176:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_93957501_93982501_64C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66
12	93964865	640176:2	A	]12:93964568]A	25	PASS	EVDNC=ASSMB;HOMSEQ=AGAATTAGGAGCTGGG;MAPQ=60;MATEID=640176:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_93957501_93982501_64C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66
12	95839932	641035:1	G	G[12:95842549[	69	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=641035:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:95839932(+)-12:95842549(-)__12_95819501_95844501D;SPAN=2617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32
12	95842549	641035:2	A	]12:95839932]A	69	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=641035:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:95839932(+)-12:95842549(-)__12_95819501_95844501D;SPAN=2617;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32
12	95946577	641078:1	C	C[12:95949177[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGACTGC;MAPQ=60;MATEID=641078:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_95942001_95967001_32C;SPAN=2600;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:39:70:66.2:109.1,0,66.2:39:0:-109.6:109.6
12	95949177	641078:2	A	]12:95946577]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGACTGC;MAPQ=60;MATEID=641078:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_95942001_95967001_32C;SPAN=2600;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:39:70:66.2:109.1,0,66.2:39:0:-109.6:109.6
12	97093816	641559:1	T	T[12:97094584[	13	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=641559:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_97093501_97118501_32C;SPAN=768;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:36:13.1:13.1,0,75.8:7:0:-12.99:15.64
12	97094584	641559:2	T	]12:97093816]T	13	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=641559:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_97093501_97118501_32C;SPAN=768;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:36:13.1:13.1,0,75.8:7:0:-12.99:15.64
12	97160963	641593:1	T	T[12:97161278[	99	PASS	EVDNC=ASSMB;HOMSEQ=GAGCTTGGTGTTTT;MAPQ=60;MATEID=641593:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_97142501_97167501_30C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:29:10.2:112.2,10.2,0:37:0:-112.2:112.2
12	97161278	641593:2	G	]12:97160963]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GAGCTTGGTGTTTT;MAPQ=60;MATEID=641593:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_97142501_97167501_30C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:29:10.2:112.2,10.2,0:37:0:-112.2:112.2
12	98569527	642178:1	T	T[12:99037303[	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=642178:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_99029001_99054001_31C;SPAN=467776;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69
12	99037303	642178:2	T	]12:98569527]T	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=642178:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_99029001_99054001_31C;SPAN=467776;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69
12	100282199	642588:1	A	A[12:100282483[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTGGCTAATTTTTGTA;MAPQ=60;MATEID=642588:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100278501_100303501_22C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:27:10.5:115.5,10.5,0:30:9:-115.5:115.5
12	100282483	642588:2	G	]12:100282199]G	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTGGCTAATTTTTGTA;MAPQ=60;MATEID=642588:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100278501_100303501_22C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:27:10.5:115.5,10.5,0:30:9:-115.5:115.5
12	100627443	642686:1	T	]12:100717132]T	26	PASS	DISC_MAPQ=49;EVDNC=ASDIS;INSERTION=GCAAAC;MAPQ=60;MATEID=642686:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100695001_100720001_30C;SPAN=89689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:7:4:-27.29:27.29
12	100717132	642686:2	G	G[12:100627443[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCAAAC;MAPQ=60;MATEID=642686:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100695001_100720001_30C;SPAN=89689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:7:4:-27.29:27.29
12	101708632	643044:1	G	G[12:101713309[	14	PASS	EVDNC=ASSMB;HOMSEQ=ACAG;MAPQ=60;MATEID=643044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_101699501_101724501_55C;SPAN=4677;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:31:14.6:14.6,0,60.8:7:0:-14.39:16.16
12	101713309	643044:2	A	]12:101708632]A	14	PASS	EVDNC=ASSMB;HOMSEQ=ACAG;MAPQ=60;MATEID=643044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_101699501_101724501_55C;SPAN=4677;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:31:14.6:14.6,0,60.8:7:0:-14.39:16.16
12	103965852	651667:1	G	[12:125316602[G	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=651667:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_125293001_125318001_45C;SPAN=21350750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:23:12.9:141.9,12.9,0:39:13:-141.9:141.9
12	103985728	643737:1	A	A[12:103986948[	26	PASS	DISC_MAPQ=15;EVDNC=ASDIS;MAPQ=60;MATEID=643737:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_103978001_104003001_17C;SPAN=1220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:45:26.9:26.9,0,86.3:9:3:-26.96:28.7
12	103986948	643737:2	T	]12:103985728]T	26	PASS	DISC_MAPQ=35;EVDNC=ASDIS;MAPQ=48;MATEID=643737:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_103978001_104003001_17C;SPAN=1220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:45:26.9:26.9,0,86.3:9:3:-26.96:28.7
12	103988861	643740:1	A	A]12:125316718]	75	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=643740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:103988861(+)-12:125316718(+)__12_103978001_104003001D;SPAN=21327857;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:29:1.5:75.9,1.5,0:0:25:-79.34:79.34
12	104125233	126956:2	T	]2:171438928]T	99	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCAGTC;MAPQ=60;MATEID=126956:1;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_2_171426501_171451501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:30:12.9:141.9,12.9,0:46:9:-141.9:141.9
12	104975278	644146:1	A	A[12:104979768[	92	PASS	EVDNC=ASSMB;HOMSEQ=TATA;MAPQ=60;MATEID=644146:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_104958001_104983001_9C;SPAN=4490;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42
12	104979768	644146:2	T	]12:104975278]T	92	PASS	EVDNC=ASSMB;HOMSEQ=TATA;MAPQ=60;MATEID=644146:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_104958001_104983001_9C;SPAN=4490;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42
12	107809482	420918:2	A	]7:111413698]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=420918:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_111401501_111426501_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92
12	107828783	644977:1	A	A[12:107829087[	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAGCTGGTCCA;MAPQ=60;MATEID=644977:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_107824501_107849501_47C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:30:34.4:41,0,34.4:12:6:-41.11:41.11
12	107829087	644977:2	A	]12:107828783]A	41	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAGCTGGTCCA;MAPQ=60;MATEID=644977:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_107824501_107849501_47C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:30:34.4:41,0,34.4:12:6:-41.11:41.11
12	107971134	645049:1	T	[12:107972746[T	27	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TTCTG;MAPQ=0;MATEID=645049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_107971501_107996501_18C;SPAN=1612;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:9:6:-27.88:28.16
12	107972746	645049:2	C	[12:107971134[C	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTG;MAPQ=60;MATEID=645049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_107971501_107996501_18C;SPAN=1612;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:9:6:-27.88:28.16
12	107973569	645044:2	T	T[1:114957233[	19	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=645044:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_107971501_107996501_49C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
12	109661407	645728:1	A	]12:109661985]A	52	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=645728:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:109661407(-)-12:109661985(+)__12_109637501_109662501D;SPAN=578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:61:52.4:52.4,0,98.6:0:21:-52.17:53.04
12	109661985	645728:2	T	T[12:109661407[	52	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=645728:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:109661407(-)-12:109661985(+)__12_109637501_109662501D;SPAN=578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:61:52.4:52.4,0,98.6:0:21:-52.17:53.04
12	109868246	645814:1	A	[12:109912750[A	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTG;MAPQ=60;MATEID=645814:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_109858001_109883001_7C;SPAN=44504;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:11:5:-33.92:33.92
12	109912750	645814:2	C	[12:109868246[C	33	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGTG;MAPQ=60;MATEID=645814:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_109858001_109883001_7C;SPAN=44504;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:11:5:-33.92:33.92
12	110216250	645904:1	G	G[12:110216550[	9	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGG;MAPQ=60;MATEID=645904:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_110201001_110226001_19C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96
12	110216550	645904:2	C	]12:110216250]C	9	PASS	EVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGG;MAPQ=60;MATEID=645904:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_110201001_110226001_19C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96
12	110829790	632064:2	A	]12:65229310]A	17	PASS	EVDNC=ASSMB;INSERTION=AAG;MAPQ=60;MATEID=632064:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_65219001_65244001_43C;SPAN=45600480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56
12	114529434	647132:1	A	]12:114549384]A	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=647132:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_114537501_114562501_41C;SPAN=19950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:8:7:-35.24:35.24
12	114549384	647132:2	T	T[12:114529434[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=647132:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_114537501_114562501_41C;SPAN=19950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:8:7:-35.24:35.24
12	118295227	648631:2	G	G[12:69153592[	22	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=648631:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:69153592(-)-12:118295227(+)__12_118286001_118311001D;SPAN=49141635;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
12	119585902	649147:1	A	A[12:119587086[	67	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCATGA;MAPQ=60;MATEID=649147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_119584501_119609501_35C;SPAN=1184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:29:5:67.7,0,5:15:15:-70.94:70.94
12	119587086	649147:2	G	]12:119585902]G	67	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCATGA;MAPQ=60;MATEID=649147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_119584501_119609501_35C;SPAN=1184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:29:5:67.7,0,5:15:15:-70.94:70.94
12	120852804	649669:1	A	]12:120852878]A	69	PASS	EVDNC=ASSMB;INSERTION=GATATATGAAATACATATTTCATATAATATATACATATG;MAPQ=60;MATEID=649669:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_12_120834001_120859001_57C;SPAN=74;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:57:69.8:69.8,0,73.1:26:0:-69.8:69.81
12	120852878	649669:2	T	T[12:120852804[	69	PASS	EVDNC=ASSMB;INSERTION=GATATATGAAATACATATTTCATATAATATATACATATG;MAPQ=60;MATEID=649669:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_12_120834001_120859001_57C;SPAN=74;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:57:69.8:69.8,0,73.1:26:0:-69.8:69.81
12	124438685	651290:1	A	]12:124439523]A	38	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=651290:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:124438685(-)-12:124439523(+)__12_124435501_124460501D;SPAN=838;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:39:38.6:38.6,0,58.4:0:15:-38.55:38.8
12	124439523	651290:2	G	G[12:124438685[	38	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=651290:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:124438685(-)-12:124439523(+)__12_124435501_124460501D;SPAN=838;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:39:38.6:38.6,0,58.4:0:15:-38.55:38.8
12	124849873	651462:1	G	G[12:124850162[	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGGAGTTCCAGACCAGCCTGG;MAPQ=60;MATEID=651462:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_124827501_124852501_120C;SPAN=289;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:26:2.6:62,0,2.6:14:11:-65.14:65.14
12	124850162	651462:2	C	]12:124849873]C	62	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGGAGTTCCAGACCAGCCTGG;MAPQ=60;MATEID=651462:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_124827501_124852501_120C;SPAN=289;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:26:2.6:62,0,2.6:14:11:-65.14:65.14
12	125114682	651626:1	C	C[12:125114918[	23	PASS	EVDNC=ASSMB;HOMSEQ=CACATGGTAAGGGCTTCCCC;MAPQ=60;MATEID=651626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_125097001_125122001_36C;SPAN=236;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
12	125114918	651626:2	C	]12:125114682]C	23	PASS	EVDNC=ASSMB;HOMSEQ=CACATGGTAAGGGCTTCCCC;MAPQ=60;MATEID=651626:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_125097001_125122001_36C;SPAN=236;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
12	125316601	619289:2	A	[12:25803192[A	52	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=619289:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:25803192(-)-12:125316601(-)__12_25798501_25823501D;SPAN=99513409;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81
12	125316602	651667:2	C	[12:103965852[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=651667:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_125293001_125318001_45C;SPAN=21350750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:47:23:12.9:141.9,12.9,0:39:13:-141.9:141.9
12	125316718	643740:2	C	C]12:103988861]	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=643740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:103988861(+)-12:125316718(+)__12_103978001_104003001D;SPAN=21327857;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:29:1.5:75.9,1.5,0:0:25:-79.34:79.34
12	126832129	652191:2	C	[2:74561101[C	51	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCT;MAPQ=60;MATEID=652191:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_12_126812001_126837001_50C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:27:15.5:51.8,0,15.5:12:4:-52.86:52.86
12	127040067	652330:1	T	T[12:127040673[	47	PASS	EVDNC=ASSMB;HOMSEQ=CTAT;MAPQ=60;MATEID=652330:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127032501_127057501_17C;SPAN=606;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96
12	127040673	652330:2	C	]12:127040067]C	47	PASS	EVDNC=ASSMB;HOMSEQ=CTAT;MAPQ=60;MATEID=652330:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127032501_127057501_17C;SPAN=606;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96
12	127310968	652478:1	T	T[12:127311375[	9	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=652478:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127302001_127327001_104C;SPAN=407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96
12	127311375	652478:2	T	]12:127310968]T	9	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=652478:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127302001_127327001_104C;SPAN=407;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96
12	127553449	652605:1	T	T[12:127553750[	45	PASS	EVDNC=ASSMB;HOMSEQ=CTGTTTCTTTTCTTCTT;MAPQ=60;MATEID=652605:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_127547001_127572001_127C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05
12	127553750	652605:2	C	]12:127553449]C	45	PASS	EVDNC=ASSMB;HOMSEQ=CTGTTTCTTTTCTTCTT;MAPQ=60;MATEID=652605:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_127547001_127572001_127C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05
12	129235285	653458:1	T	T[12:129235878[	19	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=653458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_129213001_129238001_115C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23
12	129235878	653458:2	A	]12:129235285]A	19	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=653458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_129213001_129238001_115C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23
12	129575758	653630:1	T	T[12:129576074[	92	PASS	EVDNC=ASSMB;HOMSEQ=CAGATAGATACATTTT;MAPQ=60;MATEID=653630:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_129556001_129581001_93C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:28:8.4:92.4,8.4,0:30:0:-92.42:92.42
12	129576074	653630:2	C	]12:129575758]C	92	PASS	EVDNC=ASSMB;HOMSEQ=CAGATAGATACATTTT;MAPQ=60;MATEID=653630:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_129556001_129581001_93C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:28:8.4:92.4,8.4,0:30:0:-92.42:92.42
12	130043305	653846:1	A	]12:130043472]A	22	PASS	EVDNC=ASSMB;HOMSEQ=ACACATGCACACAC;MAPQ=60;MATEID=653846:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_12_130021501_130046501_3C;SPAN=167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98
12	130043472	653846:2	C	C[12:130043305[	22	PASS	EVDNC=ASSMB;HOMSEQ=ACACATGCACACAC;MAPQ=60;MATEID=653846:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_12_130021501_130046501_3C;SPAN=167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98
12	131226570	654514:1	A	[12:131439049[A	18	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=654514:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131226570(-)-12:131439049(-)__12_131418001_131443001D;SPAN=212479;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
12	131268105	654494:1	G	G]12:131402665]	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=654494:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131268105(+)-12:131402665(+)__12_131393501_131418501D;SPAN=134560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
12	131402665	654494:2	A	A]12:131268105]	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=654494:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131268105(+)-12:131402665(+)__12_131393501_131418501D;SPAN=134560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
12	131432986	654517:1	T	]12:131433079]T	39	PASS	EVDNC=ASSMB;HOMSEQ=TCCTCTCCCCTGTGTCCCGGCATCCCCCGCAT;MAPQ=36;MATEID=654517:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_12_131418001_131443001_65C;SPAN=93;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
12	131433079	654517:2	T	T[12:131432986[	39	PASS	EVDNC=ASSMB;HOMSEQ=TCCTCTCCCCTGTGTCCCGGCATCCCCCGCAT;MAPQ=60;MATEID=654517:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_12_131418001_131443001_65C;SPAN=93;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
12	131439049	654514:2	C	[12:131226570[C	18	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=654514:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131226570(-)-12:131439049(-)__12_131418001_131443001D;SPAN=212479;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
12	131613513	654667:1	T	T]12:131633939]	49	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=654667:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131613513(+)-12:131633939(+)__12_131614001_131639001D;SPAN=20426;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
12	131614588	654668:1	C	[12:131633895[C	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=654668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_131614001_131639001_72C;SPAN=19307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:8:11:-52.81:52.81
12	131633895	654668:2	G	[12:131614588[G	52	PASS	DISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=C;MAPQ=43;MATEID=654668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_131614001_131639001_72C;SPAN=19307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:18:4.8:52.8,4.8,0:8:11:-52.81:52.81
12	131633939	654667:2	C	C]12:131613513]	49	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=654667:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131613513(+)-12:131633939(+)__12_131614001_131639001D;SPAN=20426;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
12	131779209	654749:1	G	]12:131779312]G	28	PASS	EVDNC=ASSMB;HOMSEQ=GTGTGTGAAGAGGGCGGCGC;MAPQ=25;MATEID=654749:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_12_131761001_131786001_4C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
12	131779312	654749:2	C	C[12:131779209[	28	PASS	EVDNC=ASSMB;HOMSEQ=GTGTGTGAAGAGGGCGGCGC;MAPQ=60;MATEID=654749:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_12_131761001_131786001_4C;SPAN=103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
12	132397258	654980:1	G	]12:132397846]G	22	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=GCCCTCCCCGGGGCCCCTCCTGGGCTTTCACCTGCGTCTCTGGG;MAPQ=60;MATEID=654980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132373501_132398501_39C;SPAN=588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:4:7:-22.12:22.58
12	132397846	654980:2	G	G[12:132397258[	22	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GCCCTCCCCGGGGCCCCTCCTGGGCTTTCACCTGCGTCTCTGGG;MAPQ=60;MATEID=654980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132373501_132398501_39C;SPAN=588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:4:7:-22.12:22.58
12	132411313	654995:1	C	]12:132411391]C	28	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ACACGGGCACCCACACACACACA;INSERTION=CAACACAGGCCCACACGCACCCGTGCACACACAGGCCTCCCACACACACACAGGCACT;MAPQ=60;MATEID=654995:2;MATENM=5;NM=2;NUMPARTS=3;SCTG=c_12_132398001_132423001_44C;SPAN=78;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
12	132411391	654995:2	A	A[12:132411313[	28	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ACACGGGCACCCACACACACACA;INSERTION=CAACACAGGCCCACACGCACCCGTGCACACACAGGCCTCCCACACACACACAGGCACT;MAPQ=60;MATEID=654995:1;MATENM=2;NM=5;NUMPARTS=3;SCTG=c_12_132398001_132423001_44C;SPAN=78;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28
12	132473094	655080:1	T	T[12:132474099[	33	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=655080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:132473094(+)-12:132474099(-)__12_132471501_132496501D;SPAN=1005;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:0:11:-34.67:34.67
12	132474099	655080:2	T	]12:132473094]T	33	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=655080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:132473094(+)-12:132474099(-)__12_132471501_132496501D;SPAN=1005;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:13:0.3:33,0.3,0:0:11:-34.67:34.67
12	132474348	655090:1	C	]12:132542292]C	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=655090:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132520501_132545501_33C;SPAN=67944;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:7:8:-25.7:25.87
12	132542292	655090:2	C	C[12:132474348[	25	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=655090:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132520501_132545501_33C;SPAN=67944;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:7:8:-25.7:25.87
12	132742761	655207:2	C	]1:6937887]C	20	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=655207:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:6937887(+)-12:132742761(-)__12_132741001_132766001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36
13	16000705	655427:1	A	A[13:16006260[	42	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=655427:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16000705(+)-13:16006260(-)__13_15998501_16023501D;SPAN=5555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	16001321	655429:1	G	]13:16018130]G	0	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=655429:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001321(-)-13:16018130(+)__13_15998501_16023501D;SPAN=16809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:276:24.4:0,24.4,742.6:0:16:24.77:26.82
13	16001617	655434:1	C	C[13:16012944[	7	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=655434:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001617(+)-13:16012944(-)__13_15998501_16023501D;SPAN=11327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:91:7.7:7.7,0,218.9:0:10:-7.431:19.65
13	16002842	655447:1	T	]13:16014050]T	4	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=655447:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16002842(-)-13:16014050(+)__13_15998501_16023501D;SPAN=11208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:102:4.4:4.4,0,251.9:0:10:-4.339:19.13
13	16005128	655459:1	T	T[13:16016361[	47	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655459:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16005128(+)-13:16016361(-)__13_15998501_16023501D;SPAN=11233;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:88:47.9:47.9,0,173.3:0:22:-47.89:51.9
13	16006260	655427:2	G	]13:16000705]G	42	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655427:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16000705(+)-13:16006260(-)__13_15998501_16023501D;SPAN=5555;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	16009131	655481:1	G	G[13:16020430[	41	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655481:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16009131(+)-13:16020430(-)__13_15998501_16023501D;SPAN=11299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:42:41:41,0,64.1:0:16:-41.01:41.3
13	16010771	655489:1	A	A[13:16016355[	1	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=655489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16010771(+)-13:16016355(-)__13_15998501_16023501D;SPAN=5584;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:102:1.1:1.1,0,255.2:0:9:-1.038:16.79
13	16011227	655498:1	A	]13:16022545]A	0	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655498:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011227(-)-13:16022545(+)__13_15998501_16023501D;SPAN=11318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:195:1.9:0,1.9,495.1:0:16:1.997:29.32
13	16011579	655500:1	C	C[13:16017146[	0	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655500:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011579(+)-13:16017146(-)__13_15998501_16023501D;SPAN=5567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:221:19:0,19,594.1:0:13:19.21:21.88
13	16012944	655434:2	C	]13:16001617]C	7	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=655434:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001617(+)-13:16012944(-)__13_15998501_16023501D;SPAN=11327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:91:7.7:7.7,0,218.9:0:10:-7.431:19.65
13	16013417	892860:1	G	[21:7969771[G	20	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=892860:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013417(-)-21:7969771(-)__21_7962501_7987501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36
13	16013930	655511:1	G	]13:16019632]G	51	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=655511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013930(-)-13:16019632(+)__13_15998501_16023501D;SPAN=5702;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:41:51.2:51.2,0,51.2:0:19:-51.19:51.2
13	16014050	655447:2	T	T[13:16002842[	4	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=655447:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16002842(-)-13:16014050(+)__13_15998501_16023501D;SPAN=11208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:102:4.4:4.4,0,251.9:0:10:-4.339:19.13
13	16014991	655523:1	A	]13:16020652]A	55	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=655523:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16014991(-)-13:16020652(+)__13_15998501_16023501D;SPAN=5661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:85:55.4:55.4,0,157.7:0:24:-55.33:58.11
13	16016339	655526:1	G	]13:16022071]G	98	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=655526:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016339(-)-13:16022071(+)__13_15998501_16023501D;SPAN=5732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:73:85.1:98.3,0,85.1:0:36:-98.36:98.36
13	16016355	655489:2	G	]13:16010771]G	1	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=655489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16010771(+)-13:16016355(-)__13_15998501_16023501D;SPAN=5584;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:102:1.1:1.1,0,255.2:0:9:-1.038:16.79
13	16016361	655459:2	T	]13:16005128]T	47	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=655459:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16005128(+)-13:16016361(-)__13_15998501_16023501D;SPAN=11233;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:88:47.9:47.9,0,173.3:0:22:-47.89:51.9
13	16016553	896677:1	G	]21:10789057]G	82	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GAAGCATTCTGAGAAACTTCTTT;MAPQ=60;MATEID=896677:2;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_21_10780001_10805001_326C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:95:82.4:82.4,0,155:11:22:-82.23:83.51
13	16016588	655540:1	T	T[13:16022261[	36	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655540:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016588(+)-13:16022261(-)__13_15998501_16023501D;SPAN=5673;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:116:36.8:36.8,0,254.6:0:21:-36.71:46.2
13	16017146	655500:2	C	]13:16011579]C	0	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655500:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011579(+)-13:16017146(-)__13_15998501_16023501D;SPAN=5567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:221:19:0,19,594.1:0:13:19.21:21.88
13	16018130	655429:2	G	G[13:16001321[	0	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=655429:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001321(-)-13:16018130(+)__13_15998501_16023501D;SPAN=16809;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:276:24.4:0,24.4,742.6:0:16:24.77:26.82
13	16019632	655511:2	A	A[13:16013930[	51	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=655511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013930(-)-13:16019632(+)__13_15998501_16023501D;SPAN=5702;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:41:51.2:51.2,0,51.2:0:19:-51.19:51.2
13	16020430	655481:2	G	]13:16009131]G	41	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=655481:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16009131(+)-13:16020430(-)__13_15998501_16023501D;SPAN=11299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:42:41:41,0,64.1:0:16:-41.01:41.3
13	16020652	655523:2	G	G[13:16014991[	55	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=655523:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16014991(-)-13:16020652(+)__13_15998501_16023501D;SPAN=5661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:85:55.4:55.4,0,157.7:0:24:-55.33:58.11
13	16022071	655526:2	G	G[13:16016339[	98	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655526:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016339(-)-13:16022071(+)__13_15998501_16023501D;SPAN=5732;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:36:73:85.1:98.3,0,85.1:0:36:-98.36:98.36
13	16022261	655540:2	A	]13:16016588]A	36	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=655540:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016588(+)-13:16022261(-)__13_15998501_16023501D;SPAN=5673;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:116:36.8:36.8,0,254.6:0:21:-36.71:46.2
13	16022545	655498:2	N	N[13:16011227[	0	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=655498:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011227(-)-13:16022545(+)__13_15998501_16023501D;SPAN=11318;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:195:1.9:0,1.9,495.1:0:16:1.997:29.32
13	16031321	655617:1	A	]13:16057058]A	39	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=655617:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16031321(-)-13:16057058(+)__13_16047501_16072501D;SPAN=25737;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:0:13:-39.61:39.61
13	16057058	655617:2	T	T[13:16031321[	39	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=655617:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16031321(-)-13:16057058(+)__13_16047501_16072501D;SPAN=25737;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:0:13:-39.61:39.61
13	16125492	656014:1	C	]13:16163215]C	43	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=656014:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16125492(-)-13:16163215(+)__13_16145501_16170501D;SPAN=37723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:0:16:-43.26:43.26
13	16127862	655887:1	A	]13:16145009]A	0	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16127862(-)-13:16145009(+)__13_16121001_16146001D;SPAN=17147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:317:59.3:0,59.3,917.6:0:9:59.4:12.27
13	16145009	655887:2	T	T[13:16127862[	0	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=655887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16127862(-)-13:16145009(+)__13_16121001_16146001D;SPAN=17147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:317:59.3:0,59.3,917.6:0:9:59.4:12.27
13	16163215	656014:2	T	T[13:16125492[	43	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=656014:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16125492(-)-13:16163215(+)__13_16145501_16170501D;SPAN=37723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:34:40.1:43.4,0,40.1:0:16:-43.26:43.26
13	16166518	656143:1	C	]13:16177110]C	26	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=656143:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16166518(-)-13:16177110(+)__13_16145501_16170501D;SPAN=10592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	16176791	656569:1	C	]13:16177450]C	18	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=656569:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16176791(-)-13:16177450(+)__13_16170001_16195001D;SPAN=659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76
13	16177110	656143:2	G	G[13:16166518[	26	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=656143:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16166518(-)-13:16177110(+)__13_16145501_16170501D;SPAN=10592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	16177450	656569:2	G	G[13:16176791[	18	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=656569:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16176791(-)-13:16177450(+)__13_16170001_16195001D;SPAN=659;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76
13	16182447	656725:1	A	]13:16182808]A	65	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=ATAAAAACTAGACAGAAGA;MAPQ=14;MATEID=656725:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_16170001_16195001_257C;SPAN=361;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:61:65.6:65.6,0,85.4:23:3:-65.38:65.57
13	16182808	656725:2	A	A[13:16182447[	65	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=ATAAAAACTAGACAGAAGA;MAPQ=60;MATEID=656725:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_16170001_16195001_257C;SPAN=361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:61:65.6:65.6,0,85.4:23:3:-65.38:65.57
13	16256480	658420:1	G	]13:16259419]G	72	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=658420:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16256480(-)-13:16259419(+)__13_16243501_16268501D;SPAN=2939;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:20:6.6:72.6,6.6,0:0:24:-72.62:72.62
13	16259044	658453:1	A	[20:28781252[A	92	PASS	DISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=TCAGAATGCTTCTGTGTAGTTTTTTTGTGAAGATATTT;MAPQ=38;MATEID=658453:2;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_13_16243501_16268501_360C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:10:8.4:92.4,8.4,0:21:9:-92.42:92.42
13	16259419	658420:2	N	N[13:16256480[	72	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658420:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16256480(-)-13:16259419(+)__13_16243501_16268501D;SPAN=2939;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:20:6.6:72.6,6.6,0:0:24:-72.62:72.62
13	16271398	658578:1	A	A[13:16274326[	2	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=658578:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271398(+)-13:16274326(-)__13_16268001_16293001D;SPAN=2928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:87:2:2,0,216.5:0:8:-1.953:15.07
13	16271442	658579:1	A	A[13:16277305[	69	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=658579:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271442(+)-13:16277305(-)__13_16268001_16293001D;SPAN=5863;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:0:21:-68.32:68.32
13	16271831	658587:1	C	C[13:16274694[	17	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=658587:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271831(+)-13:16274694(-)__13_16268001_16293001D;SPAN=2863;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:44:17.3:17.3,0,93.2:0:9:-17.34:20.33
13	16274326	658578:2	A	]13:16271398]A	2	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=658578:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271398(+)-13:16274326(-)__13_16268001_16293001D;SPAN=2928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:87:2:2,0,216.5:0:8:-1.953:15.07
13	16274694	658587:2	G	]13:16271831]G	17	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=658587:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271831(+)-13:16274694(-)__13_16268001_16293001D;SPAN=2863;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:44:17.3:17.3,0,93.2:0:9:-17.34:20.33
13	16277305	658579:2	T	]13:16271442]T	69	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=658579:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271442(+)-13:16277305(-)__13_16268001_16293001D;SPAN=5863;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:0:21:-68.32:68.32
13	16279161	658601:1	C	]13:16280739]C	42	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=658601:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16279161(-)-13:16280739(+)__13_16268001_16293001D;SPAN=1578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	16280739	658601:2	G	G[13:16279161[	42	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658601:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16279161(-)-13:16280739(+)__13_16268001_16293001D;SPAN=1578;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	16293214	658722:1	T	]13:16345186]T	46	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=658722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293214(-)-13:16345186(+)__13_16341501_16366501D;SPAN=51972;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:0:15:-46.21:46.21
13	16293475	659043:1	T	T[13:16624297[	23	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=659043:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293475(+)-13:16624297(-)__13_16611001_16636001D;SPAN=330822;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84
13	16298838	658649:1	T	T[13:16678833[	33	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658649:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16298838(+)-13:16678833(-)__13_16292501_16317501D;SPAN=379995;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:0:12:-33.55:33.55
13	16326610	659640:1	G	]13:17149141]G	58	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=659640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326610(-)-13:17149141(+)__13_17125501_17150501D;SPAN=822531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:39:38.6:58.4,0,38.6:0:21:-58.54:58.54
13	16326671	659080:1	A	]13:16653519]A	18	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=659080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326671(-)-13:16653519(+)__13_16635501_16660501D;SPAN=326848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
13	16326907	658726:1	T	T[13:16358236[	52	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=658726:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326907(+)-13:16358236(-)__13_16341501_16366501D;SPAN=31329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:24:6.5:52.7,0,6.5:0:18:-54.59:54.59
13	16344756	658734:1	A	]13:16358491]A	89	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=658734:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16344756(-)-13:16358491(+)__13_16341501_16366501D;SPAN=13735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:21:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	16345186	658722:2	C	C[13:16293214[	46	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=658722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293214(-)-13:16345186(+)__13_16341501_16366501D;SPAN=51972;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:0:15:-46.21:46.21
13	16345189	659048:1	T	T[13:16624249[	75	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=659048:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16345189(+)-13:16624249(-)__13_16611001_16636001D;SPAN=279060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92
13	16358236	658726:2	A	]13:16326907]A	52	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=658726:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326907(+)-13:16358236(-)__13_16341501_16366501D;SPAN=31329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:24:6.5:52.7,0,6.5:0:18:-54.59:54.59
13	16358491	658734:2	T	T[13:16344756[	89	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=658734:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16344756(-)-13:16358491(+)__13_16341501_16366501D;SPAN=13735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:21:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	16385294	659116:1	G	]13:16679290]G	26	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659116:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16385294(-)-13:16679290(+)__13_16660001_16685001D;SPAN=293996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:1:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	16426078	659443:1	G	G[13:16940860[	0	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=659443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16426078(+)-13:16940860(-)__13_16929501_16954501D;SPAN=514782;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:95:0:0,0,237.6:0:8:0.2957:14.75
13	16427155	659118:1	G	G[13:16678845[	25	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=659118:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16427155(+)-13:16678845(-)__13_16660001_16685001D;SPAN=251690;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
13	16507002	658964:1	T	T[13:17299846[	29	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=658964:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16507002(+)-13:17299846(-)__13_16488501_16513501D;SPAN=792844;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:47:29.9:29.9,0,86:0:13:-29.7:31.34
13	16526723	658974:1	A	]13:17086687]A	99	PASS	DISC_MAPQ=44;EVDNC=ASDIS;HOMSEQ=AAAAGCAAATATCTTCCCATAAACACTAGACAGAAACATTCTCAGAAACTTCTTTATGA;MAPQ=60;MATEID=658974:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_13_16513001_16538001_654C;SPAN=559964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:29:14.7:161.7,14.7,0:32:23:-161.7:161.7
13	16526965	658976:1	A	A[13:17146679[	44	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=658976:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526965(+)-13:17146679(-)__13_16513001_16538001D;SPAN=619714;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:43:44:44,0,63.8:0:17:-44.03:44.24
13	16526973	658977:1	A	A[13:16603430[	14	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=658977:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526973(+)-13:16603430(-)__13_16513001_16538001D;SPAN=76457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
13	16527034	658978:1	G	G[13:16906930[	46	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=658978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16527034(+)-13:16906930(-)__13_16513001_16538001D;SPAN=379896;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:0:16:-46.21:46.21
13	16551507	658998:1	C	C[13:16871236[	82	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=TTGGAAACGGGAATATCTTCATATCAAATCTAGACAGAAGCATTCTCAGAAAC;MAPQ=14;MATEID=658998:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_13_16537501_16562501_35C;SPAN=319729;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:12:7.5:82.5,7.5,0:26:2:-82.52:82.52
13	16603430	658977:2	A	]13:16526973]A	14	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=658977:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526973(+)-13:16603430(-)__13_16513001_16538001D;SPAN=76457;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89
13	16618050	659056:1	A	A[13:16631536[	6	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=659056:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16618050(+)-13:16631536(-)__13_16611001_16636001D;SPAN=13486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:83:6.5:6.5,0,201.2:0:9:-6.378:17.63
13	16624236	659222:1	T	]13:16726447]T	47	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=659222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624236(-)-13:16726447(+)__13_16709001_16734001D;SPAN=102211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75
13	16624249	659048:2	T	]13:16345189]T	75	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=659048:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16345189(+)-13:16624249(-)__13_16611001_16636001D;SPAN=279060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92
13	16624297	659043:2	T	]13:16293475]T	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=659043:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293475(+)-13:16624297(-)__13_16611001_16636001D;SPAN=330822;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84
13	16624499	659339:1	T	T[13:16857426[	0	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=659339:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624499(+)-13:16857426(-)__13_16856001_16881001D;SPAN=232927;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:104:2.7:0,2.7,267.3:0:8:2.826:14.43
13	16624711	659065:1	C	C[13:17396031[	28	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=659065:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624711(+)-13:17396031(-)__13_16611001_16636001D;SPAN=771320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
13	16631536	659056:2	C	]13:16618050]C	6	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=659056:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16618050(+)-13:16631536(-)__13_16611001_16636001D;SPAN=13486;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:83:6.5:6.5,0,201.2:0:9:-6.378:17.63
13	16653519	659080:2	A	A[13:16326671[	18	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=659080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326671(-)-13:16653519(+)__13_16635501_16660501D;SPAN=326848;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27
13	16656410	659717:1	A	A[13:17209367[	18	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=659717:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16656410(+)-13:17209367(-)__13_17199001_17224001D;SPAN=552957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:63:18.8:18.8,0,137.6:0:11:-18.6:24.01
13	16665301	659226:1	T	T[13:16710945[	56	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AGCATCCTCAGAAACTTCTTTGTGATGTGTGCATTCAAGTCACAGAGTTGAACATT;MAPQ=60;MATEID=659226:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_16709001_16734001_661C;SPAN=45644;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:16:8:-56.11:56.11
13	16678833	658649:2	T	]13:16298838]T	33	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=658649:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16298838(+)-13:16678833(-)__13_16292501_16317501D;SPAN=379995;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:0:12:-33.55:33.55
13	16678845	659118:2	T	]13:16427155]T	25	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=659118:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16427155(+)-13:16678845(-)__13_16660001_16685001D;SPAN=251690;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
13	16679290	659116:2	G	G[13:16385294[	26	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=659116:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16385294(-)-13:16679290(+)__13_16660001_16685001D;SPAN=293996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:1:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	16697718	659900:1	A	A[13:17361102[	89	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=659900:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697718(+)-13:17361102(-)__13_17346001_17371001D;SPAN=663384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:5:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	16697740	659651:1	A	A[13:17148635[	16	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=659651:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697740(+)-13:17148635(-)__13_17125501_17150501D;SPAN=450895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51
13	16710945	659226:2	A	]13:16665301]A	56	PASS	DISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=AGCATCCTCAGAAACTTCTTTGTGATGTGTGCATTCAAGTCACAGAGTTGAACATT;MAPQ=60;MATEID=659226:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_16709001_16734001_661C;SPAN=45644;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:8:5.1:56.1,5.1,0:16:8:-56.11:56.11
13	16726447	659222:2	T	T[13:16624236[	47	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=659222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624236(-)-13:16726447(+)__13_16709001_16734001D;SPAN=102211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75
13	16825242	659506:1	A	A[13:17018409[	31	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659506:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16825242(+)-13:17018409(-)__13_17003001_17028001D;SPAN=193167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78
13	16844805	659821:1	A	]13:17287651]A	46	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=659821:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16844805(-)-13:17287651(+)__13_17272501_17297501D;SPAN=442846;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21
13	16845061	659349:1	A	A[13:16857396[	28	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659349:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16845061(+)-13:16857396(-)__13_16856001_16881001D;SPAN=12335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:100:28.1:28.1,0,222.8:0:17:-28.01:36.89
13	16857396	659349:2	A	]13:16845061]A	28	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=659349:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16845061(+)-13:16857396(-)__13_16856001_16881001D;SPAN=12335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:100:28.1:28.1,0,222.8:0:17:-28.01:36.89
13	16857426	659339:2	A	]13:16624499]A	0	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=659339:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624499(+)-13:16857426(-)__13_16856001_16881001D;SPAN=232927;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:104:2.7:0,2.7,267.3:0:8:2.826:14.43
13	16871236	658998:2	T	]13:16551507]T	82	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=TTGGAAACGGGAATATCTTCATATCAAATCTAGACAGAAGCATTCTCAGAAAC;MAPQ=48;MATEID=658998:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_13_16537501_16562501_35C;SPAN=319729;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:12:7.5:82.5,7.5,0:26:2:-82.52:82.52
13	16871482	659378:1	G	G[13:16894583[	56	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=659378:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16871482(+)-13:16894583(-)__13_16880501_16905501D;SPAN=23101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:0:19:-56.11:56.11
13	16894583	659378:2	C	]13:16871482]C	56	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=659378:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16871482(+)-13:16894583(-)__13_16880501_16905501D;SPAN=23101;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:0:19:-56.11:56.11
13	16906905	659652:1	T	]13:17146944]T	66	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=659652:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16906905(-)-13:17146944(+)__13_17125501_17150501D;SPAN=240039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:1:6:66,6,0:0:22:-66.02:66.02
13	16906930	658978:2	G	]13:16527034]G	46	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=658978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16527034(+)-13:16906930(-)__13_16513001_16538001D;SPAN=379896;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:14:4.2:46.2,4.2,0:0:16:-46.21:46.21
13	16911984	659530:1	T	]13:17039999]T	71	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=659530:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16911984(-)-13:17039999(+)__13_17027501_17052501D;SPAN=128015;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:51:55.1:71.6,0,55.1:0:26:-71.58:71.58
13	16940860	659443:2	A	]13:16426078]A	0	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16426078(+)-13:16940860(-)__13_16929501_16954501D;SPAN=514782;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:95:0:0,0,237.6:0:8:0.2957:14.75
13	17018409	659506:2	G	]13:16825242]G	31	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=659506:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16825242(+)-13:17018409(-)__13_17003001_17028001D;SPAN=193167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78
13	17039999	659530:2	T	T[13:16911984[	71	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=659530:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16911984(-)-13:17039999(+)__13_17027501_17052501D;SPAN=128015;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:51:55.1:71.6,0,55.1:0:26:-71.58:71.58
13	17086687	658974:2	A	A[13:16526723[	99	PASS	DISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=AAAAGCAAATATCTTCCCATAAACACTAGACAGAAACATTCTCAGAAACTTCTTTATGA;MAPQ=60;MATEID=658974:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_13_16513001_16538001_654C;SPAN=559964;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:29:14.7:161.7,14.7,0:32:23:-161.7:161.7
13	17146679	658976:2	C	]13:16526965]C	44	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=658976:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526965(+)-13:17146679(-)__13_16513001_16538001D;SPAN=619714;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:43:44:44,0,63.8:0:17:-44.03:44.24
13	17146944	659652:2	G	G[13:16906905[	66	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=659652:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16906905(-)-13:17146944(+)__13_17125501_17150501D;SPAN=240039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:1:6:66,6,0:0:22:-66.02:66.02
13	17148635	659651:2	G	]13:16697740]G	16	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=659651:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697740(+)-13:17148635(-)__13_17125501_17150501D;SPAN=450895;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51
13	17149141	659640:2	T	T[13:16326610[	58	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=659640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326610(-)-13:17149141(+)__13_17125501_17150501D;SPAN=822531;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:39:38.6:58.4,0,38.6:0:21:-58.54:58.54
13	17209367	659717:2	T	]13:16656410]T	18	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=659717:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16656410(+)-13:17209367(-)__13_17199001_17224001D;SPAN=552957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:63:18.8:18.8,0,137.6:0:11:-18.6:24.01
13	17268150	659806:1	T	]13:17268348]T	99	PASS	EVDNC=ASSMB;INSERTION=AAAAATCTTCCCCTACAACG;MAPQ=60;MATEID=659806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_17248001_17273001_239C;SPAN=198;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:45:89:99:123.5,0,100.4:45:0:-123.7:123.7
13	17268348	659806:2	T	T[13:17268150[	99	PASS	EVDNC=ASSMB;INSERTION=AAAAATCTTCCCCTACAACG;MAPQ=60;MATEID=659806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_17248001_17273001_239C;SPAN=198;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:45:89:99:123.5,0,100.4:45:0:-123.7:123.7
13	17287315	659890:1	T	]13:17328244]T	29	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=659890:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17287315(-)-13:17328244(+)__13_17321501_17346501D;SPAN=40929;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
13	17287651	659821:2	T	T[13:16844805[	46	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=659821:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16844805(-)-13:17287651(+)__13_17272501_17297501D;SPAN=442846;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21
13	17299846	658964:2	A	]13:16507002]A	29	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=658964:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16507002(+)-13:17299846(-)__13_16488501_16513501D;SPAN=792844;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:47:29.9:29.9,0,86:0:13:-29.7:31.34
13	17328012	659892:1	C	]13:17396311]C	38	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659892:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17328012(-)-13:17396311(+)__13_17321501_17346501D;SPAN=68299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:0:14:-38.37:38.37
13	17328244	659890:2	A	A[13:17287315[	29	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=659890:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17287315(-)-13:17328244(+)__13_17321501_17346501D;SPAN=40929;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71
13	17361102	659900:2	G	]13:16697718]G	89	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=659900:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697718(+)-13:17361102(-)__13_17346001_17371001D;SPAN=663384;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:5:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	17396031	659065:2	T	]13:16624711]T	28	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=659065:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624711(+)-13:17396031(-)__13_16611001_16636001D;SPAN=771320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
13	17396311	659892:2	A	A[13:17328012[	38	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659892:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17328012(-)-13:17396311(+)__13_17321501_17346501D;SPAN=68299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:28:31.7:38.3,0,31.7:0:14:-38.37:38.37
13	17431936	660321:1	C	C[13:18028973[	18	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=660321:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17431936(+)-13:18028973(-)__13_18007501_18032501D;SPAN=597037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39
13	17553570	660051:1	G	G[13:17574225[	29	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=660051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17553570(+)-13:17574225(-)__13_17566501_17591501D;SPAN=20655;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71
13	17574225	660051:2	C	]13:17553570]C	29	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=660051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17553570(+)-13:17574225(-)__13_17566501_17591501D;SPAN=20655;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71
13	17711258	660261:1	T	T[13:17926844[	39	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=660261:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17711258(+)-13:17926844(-)__13_17909501_17934501D;SPAN=215586;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77
13	17926844	660261:2	A	]13:17711258]A	39	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=660261:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17711258(+)-13:17926844(-)__13_17909501_17934501D;SPAN=215586;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77
13	18028973	660321:2	A	]13:17431936]A	18	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=660321:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17431936(+)-13:18028973(-)__13_18007501_18032501D;SPAN=597037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39
13	18652931	822300:1	T	T]18:14406760]	20	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=822300:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:18652931(+)-18:14406760(+)__18_14406001_14431001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
13	18902672	660713:1	T	T[13:18902959[	79	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TACAGTCAACTCTTTT;MAPQ=55;MATEID=660713:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_18889501_18914501_14C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:9:7.2:79.2,7.2,0:23:5:-79.22:79.22
13	18902959	660713:2	T	]13:18902672]T	79	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TACAGTCAACTCTTTT;MAPQ=60;MATEID=660713:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_18889501_18914501_14C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:9:7.2:79.2,7.2,0:23:5:-79.22:79.22
13	19203230	661023:1	C	]13:19704496]C	17	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=661023:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19203230(-)-13:19704496(+)__13_19698001_19723001D;SPAN=501266;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87
13	19344209	660883:1	A	A]13:24542512]	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=660883:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19344209(+)-13:24542512(+)__13_19330501_19355501D;SPAN=5198303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
13	19348511	662933:1	A	[13:24537297[A	23	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=662933:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19348511(-)-13:24537297(-)__13_24524501_24549501D;SPAN=5188786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
13	19387612	662903:1	G	[13:24442077[G	26	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=662903:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19387612(-)-13:24442077(-)__13_24426501_24451501D;SPAN=5054465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
13	19549586	661710:1	C	C]13:21274569]	26	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=661710:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19549586(+)-13:21274569(+)__13_21266001_21291001D;SPAN=1724983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
13	19558512	660987:1	T	]13:19570101]T	17	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=660987:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19558512(-)-13:19570101(+)__13_19551001_19576001D;SPAN=11589;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
13	19570101	660987:2	T	T[13:19558512[	17	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=660987:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19558512(-)-13:19570101(+)__13_19551001_19576001D;SPAN=11589;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13
13	19704496	661023:2	G	G[13:19203230[	17	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=661023:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19203230(-)-13:19704496(+)__13_19698001_19723001D;SPAN=501266;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87
13	19716043	661448:1	T	]13:20738863]T	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=661448:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_20727001_20752001_21C;SPAN=1022820;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:9:11:-39.01:39.01
13	19768374	661073:1	G	]13:19818698]G	30	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=661073:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_19796001_19821001_35C;SPAN=50324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
13	19818698	661073:2	T	T[13:19768374[	30	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=661073:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_19796001_19821001_35C;SPAN=50324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
13	20738863	661448:2	T	T[13:19716043[	38	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=661448:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_20727001_20752001_21C;SPAN=1022820;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:9:11:-39.01:39.01
13	21274569	661710:2	G	G]13:19549586]	26	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=661710:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19549586(+)-13:21274569(+)__13_21266001_21291001D;SPAN=1724983;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
13	21325323	661748:2	T	T]6:5853533]	69	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=661748:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5853533(+)-13:21325323(+)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:6:6.3:69.3,6.3,0:0:23:-69.32:69.32
13	21325351	661746:2	G	[6:5852479[G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=661746:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5852479(-)-13:21325351(-)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	22777302	662416:1	A	]13:23163697]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=662416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_23152501_23177501_7C;SPAN=386395;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39
13	23163697	662416:2	C	C[13:22777302[	39	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=662416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_23152501_23177501_7C;SPAN=386395;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39
13	23871309	662730:1	T	]13:24067044]T	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=662730:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_13_24059001_24084001_3C;SPAN=195735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:8:7:-27.73:27.73
13	24067044	662730:2	T	T[13:23871309[	27	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=662730:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_13_24059001_24084001_3C;SPAN=195735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:8:7:-27.73:27.73
13	24442077	662903:2	G	[13:19387612[G	26	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=662903:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19387612(-)-13:24442077(-)__13_24426501_24451501D;SPAN=5054465;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
13	24537297	662933:2	T	[13:19348511[T	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=662933:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19348511(-)-13:24537297(-)__13_24524501_24549501D;SPAN=5188786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
13	24542512	660883:2	A	A]13:19344209]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=660883:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19344209(+)-13:24542512(+)__13_19330501_19355501D;SPAN=5198303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
13	26476016	663577:1	A	A[13:26478049[	89	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=663577:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26476016(+)-13:26478049(-)__13_26460001_26485001D;SPAN=2033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	26478049	663577:2	T	]13:26476016]T	89	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=663577:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26476016(+)-13:26478049(-)__13_26460001_26485001D;SPAN=2033;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12
13	26833724	663675:1	A	]13:26839046]A	26	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=663675:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_26827501_26852501_14C;SPAN=5322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:36:26.3:26.3,0,62.6:11:0:-26.19:27.08
13	26839046	663675:2	A	A[13:26833724[	26	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=663675:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_26827501_26852501_14C;SPAN=5322;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:36:26.3:26.3,0,62.6:11:0:-26.19:27.08
13	26972727	663697:1	C	]13:26973623]C	31	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=663697:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26972727(-)-13:26973623(+)__13_26950001_26975001D;SPAN=896;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:0:13:-31.39:32.26
13	26973623	663697:2	A	A[13:26972727[	31	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=663697:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26972727(-)-13:26973623(+)__13_26950001_26975001D;SPAN=896;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:0:13:-31.39:32.26
13	29641700	664459:1	T	T[13:29647708[	46	PASS	EVDNC=ASSMB;HOMSEQ=GAGAACTACTTTTT;MAPQ=60;MATEID=664459:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_13_29645001_29670001_11C;SPAN=6008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
13	29647708	664459:2	G	]13:29641700]G	46	PASS	EVDNC=ASSMB;HOMSEQ=GAGAACTACTTTTT;MAPQ=60;MATEID=664459:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_13_29645001_29670001_11C;SPAN=6008;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
13	30844083	664798:1	T	T[13:30844345[	79	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=GTGTGTGT;MAPQ=60;MATEID=664798:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_30821001_30846001_30C;SPAN=262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:17:7.2:79.2,7.2,0:17:9:-79.22:79.22
13	30844345	664798:2	G	]13:30844083]G	79	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=GTGTGTGT;MAPQ=60;MATEID=664798:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_30821001_30846001_30C;SPAN=262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:17:7.2:79.2,7.2,0:17:9:-79.22:79.22
13	35861692	665952:1	C	]13:35861791]C	44	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=665952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_35843501_35868501_5C;SPAN=99;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
13	35861791	665952:2	C	C[13:35861692[	44	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=665952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_35843501_35868501_5C;SPAN=99;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
13	35957937	665978:1	T	]13:35958395]T	12	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=665978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:35957937(-)-13:35958395(+)__13_35941501_35966501D;SPAN=458;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2
13	35958132	665982:1	C	]13:35958285]C	77	PASS	EVDNC=ASSMB;HOMSEQ=C;INSERTION=GTAACCATCACCACCATCACC;MAPQ=60;MATEID=665982:2;MATENM=3;NM=2;NUMPARTS=3;SCTG=c_13_35941501_35966501_17C;SECONDARY;SPAN=153;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:111:77.9:77.9,0,200:33:0:-77.73:80.78
13	35958285	665982:2	C	C[13:35958132[	77	PASS	EVDNC=ASSMB;HOMSEQ=C;INSERTION=GTAACCATCACCACCATCACC;MAPQ=60;MATEID=665982:1;MATENM=2;NM=3;NUMPARTS=3;SCTG=c_13_35941501_35966501_17C;SECONDARY;SPAN=153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:111:77.9:77.9,0,200:33:0:-77.73:80.78
13	35958395	665978:2	A	A[13:35957937[	12	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=665978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:35957937(-)-13:35958395(+)__13_35941501_35966501D;SPAN=458;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2
13	38483182	666631:1	A	A[13:38486065[	99	PASS	EVDNC=ASSMB;HOMSEQ=GGAA;MAPQ=60;MATEID=666631:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_13_38465001_38490001_10C;SPAN=2883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6
13	38486065	666631:2	G	]13:38483182]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GGAA;MAPQ=60;MATEID=666631:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_13_38465001_38490001_10C;SPAN=2883;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6
13	40077132	667033:1	A	]13:40077229]A	72	PASS	EVDNC=ASSMB;INSERTION=AGGAAGGAAGGAGAGAAGGAAGGAAAGAGGGAAAGAAGGAAGGAAGGTAGGGAAGCGGGGGAGGAAGGAAGG;MAPQ=60;MATEID=667033:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_40057501_40082501_10C;SPAN=97;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58
13	40077229	667033:2	A	A[13:40077132[	72	PASS	EVDNC=ASSMB;INSERTION=AGGAAGGAAGGAGAGAAGGAAGGAAAGAGGGAAAGAAGGAAGGAAGGTAGGGAAGCGGGGGAGGAAGGAAGG;MAPQ=60;MATEID=667033:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_40057501_40082501_10C;SPAN=97;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58
13	42373133	667582:1	C	]13:42373518]C	75	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=667582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_42360501_42385501_8C;SPAN=385;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:50:48.8:75.2,0,48.8:27:0:-75.32:75.32
13	42373518	667582:2	T	T[13:42373133[	75	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=667582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_42360501_42385501_8C;SPAN=385;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:50:48.8:75.2,0,48.8:27:0:-75.32:75.32
13	42457888	667624:1	G	G]13:42511705]	23	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=667624:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42457888(+)-13:42511705(+)__13_42507501_42532501D;SPAN=53817;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84
13	42511705	667624:2	T	T]13:42457888]	23	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=667624:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42457888(+)-13:42511705(+)__13_42507501_42532501D;SPAN=53817;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84
13	42965789	667750:1	T	T[13:42967310[	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=667750:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42965789(+)-13:42967310(-)__13_42948501_42973501D;SPAN=1521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3
13	42967310	667750:2	A	]13:42965789]A	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=667750:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42965789(+)-13:42967310(-)__13_42948501_42973501D;SPAN=1521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3
13	46145627	668526:1	A	A[13:46145943[	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGGGCA;MAPQ=60;MATEID=668526:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_13_46133501_46158501_0C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:27:7.5:82.5,7.5,0:26:0:-82.52:82.52
13	46145943	668526:2	A	]13:46145627]A	82	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGGGCA;MAPQ=60;MATEID=668526:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_13_46133501_46158501_0C;SPAN=316;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:27:7.5:82.5,7.5,0:26:0:-82.52:82.52
13	46526845	668674:1	T	[13:46527506[T	33	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=668674:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_13_46525501_46550501_14C;SPAN=661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:58:33.2:33.2,0,112.4:11:12:-33.21:35.64
13	46527506	668674:2	A	[13:46526845[A	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=668674:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_13_46525501_46550501_14C;SPAN=661;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:58:33.2:33.2,0,112.4:11:12:-33.21:35.64
13	47537863	669085:1	C	C]13:47539357]	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669085:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:47537863(+)-13:47539357(+)__13_47530001_47555001D;SPAN=1494;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:0:12:-30.06:30.47
13	47539357	669085:2	T	T]13:47537863]	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669085:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:47537863(+)-13:47539357(+)__13_47530001_47555001D;SPAN=1494;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:34:30.2:30.2,0,53.3:0:12:-30.06:30.47
13	48282773	669322:2	A	A]12:33864471]	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=669322:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33864471(+)-13:48282773(+)__13_48265001_48290001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05
13	49318685	669546:1	A	]19:32019277]A	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=669546:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_49294001_49319001_26C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:14:5:-49.51:49.51
13	50495150	669774:1	A	A[13:50500942[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=669774:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:50495150(+)-13:50500942(-)__13_50470001_50495001D;SPAN=5792;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:0:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	50500942	669774:2	T	]13:50495150]T	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669774:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:50495150(+)-13:50500942(-)__13_50470001_50495001D;SPAN=5792;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:0:2.4:26.4,2.4,0:0:9:-26.41:26.41
13	56018554	13015:2	A	A[1:53954324[	0	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=13015:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_79C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:108:6.9:0,6.9,283.8:7:0:7.251:12.08
13	57094112	671048:1	T	]13:57101297]T	39	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=671048:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_57085001_57110001_4C;SPAN=7185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:10:8:-39.39:39.39
13	57101297	671048:2	C	C[13:57094112[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=671048:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_57085001_57110001_4C;SPAN=7185;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:10:8:-39.39:39.39
13	58512431	671309:1	A	A[13:58514256[	42	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=671309:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:58512431(+)-13:58514256(-)__13_58506001_58531001D;SPAN=1825;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:11:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	58514256	671309:2	A	]13:58512431]A	42	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=671309:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:58512431(+)-13:58514256(-)__13_58506001_58531001D;SPAN=1825;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:11:3.9:42.9,3.9,0:0:14:-42.91:42.91
13	59899878	671671:1	A	A[13:59906689[	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=671671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_59902501_59927501_0C;SPAN=6811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:5:3:1.2:13.2,1.2,0:3:4:-13.2:13.2
13	59906689	671671:2	A	]13:59899878]A	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=671671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_59902501_59927501_0C;SPAN=6811;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:5:3:1.2:13.2,1.2,0:3:4:-13.2:13.2
13	60886851	671890:2	A	A[3:103962954[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=671890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_60882501_60907501_30C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:9:4:-33.01:33.01
13	60888202	383809:2	C	]7:25047891]C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTC;MAPQ=60;MATEID=383809:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_25039001_25064001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:24:9.6:105.6,9.6,0:27:12:-105.6:105.6
13	61171765	671986:2	T	]8:139084311]T	29	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=671986:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_61152001_61177001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91
13	66665661	680036:1	A	[13:92007460[A	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=680036:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_91997501_92022501_37C;SPAN=25341799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:7:6:-29.85:29.85
13	66665768	673423:1	T	T]13:92058480]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=673423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:66665768(+)-13:92058480(+)__13_66664501_66689501D;SPAN=25392712;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
13	71226063	916288:1	G	G]22:28674185]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916288:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:71226063(+)-22:28674185(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
13	73390558	491100:2	G	G[9:36423668[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=491100:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_36407001_36432001_29C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:14:6:-56.11:56.11
13	74341145	675549:1	T	]13:74342865]T	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCTA;MAPQ=60;MATEID=675549:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_13_74333001_74358001_1C;SPAN=1720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:41:11.4:125.4,11.4,0:30:18:-125.4:125.4
13	74342865	675549:2	A	A[13:74341145[	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TCTA;MAPQ=60;MATEID=675549:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_13_74333001_74358001_1C;SPAN=1720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:41:11.4:125.4,11.4,0:30:18:-125.4:125.4
13	78423489	676627:1	C	C[13:78424585[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCC;MAPQ=60;MATEID=676627:2;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CCC;SCTG=c_13_78424501_78449501_6C;SECONDARY;SPAN=1096;SUBN=7;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:1:2.4:26.4,2.4,0:4:5:-26.41:26.41
13	78424585	676627:2	A	]13:78423489]A	26	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCC;MAPQ=0;MATEID=676627:1;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CCC;SCTG=c_13_78424501_78449501_6C;SECONDARY;SPAN=1096;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:1:2.4:26.4,2.4,0:4:5:-26.41:26.41
13	81782375	677551:1	T	T]13:81782948]	20	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677551:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782375(+)-13:81782948(+)__13_81781001_81806001D;SPAN=573;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:34:20.3:20.3,0,63.2:0:9:-20.15:21.49
13	81782700	677552:1	T	T]13:81782901]	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782700(+)-13:81782901(+)__13_81781001_81806001D;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:40:15.2:15.2,0,84.5:0:8:-15.16:17.99
13	81782901	677552:2	T	T]13:81782700]	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782700(+)-13:81782901(+)__13_81781001_81806001D;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:40:15.2:15.2,0,84.5:0:8:-15.16:17.99
13	81782948	677551:2	A	A]13:81782375]	20	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=677551:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782375(+)-13:81782948(+)__13_81781001_81806001D;SPAN=573;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:34:20.3:20.3,0,63.2:0:9:-20.15:21.49
13	81793562	677548:2	A	]5:142077508]A	46	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=677548:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:142077508(+)-13:81793562(-)__13_81781001_81806001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21
13	85488927	70988:2	T	[2:9998890[T	52	PASS	DISC_MAPQ=1;EVDNC=ASDIS;HOMSEQ=TATATAT;MAPQ=44;MATEID=70988:1;MATENM=0;NM=48;NUMPARTS=2;SCTG=c_2_9996001_10021001_50C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:6:4.8:52.8,4.8,0:11:8:-52.81:52.81
13	86269523	678532:1	C	]Un_KN707957v1_decoy:11498]C	59	PASS	EVDNC=ASSMB;HOMSEQ=AACCTTTACTGAACTTAAAATATG;MAPQ=60;MATEID=678532:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_86264501_86289501_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41
13	92007460	680036:2	T	[13:66665661[T	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=680036:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_91997501_92022501_37C;SPAN=25341799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:7:6:-29.85:29.85
13	92058480	673423:2	T	T]13:66665768]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=673423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:66665768(+)-13:92058480(+)__13_66664501_66689501D;SPAN=25392712;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
13	93608748	680421:1	G	G[13:93751818[	46	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=680421:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_13_93737001_93762001_5C;SPAN=143070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
13	93751818	680421:2	A	]13:93608748]A	46	PASS	EVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=680421:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_13_93737001_93762001_5C;SPAN=143070;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
13	93796911	680443:1	T	]13:93797097]T	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=680443:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_93786001_93811001_10C;SPAN=186;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:12:0:-32.3:32.3
13	93797097	680443:2	T	T[13:93796911[	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=680443:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_93786001_93811001_10C;SPAN=186;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:12:0:-32.3:32.3
13	96800817	681120:1	T	]13:96829051]T	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=681120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_96824001_96849001_1C;SPAN=28234;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:17:9.9:108.9,9.9,0:25:26:-108.9:108.9
13	96829051	681120:2	T	T[13:96800817[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=681120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_96824001_96849001_1C;SPAN=28234;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:17:9.9:108.9,9.9,0:25:26:-108.9:108.9
13	101241852	682110:1	C	C[13:101244073[	33	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=682110:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:101241852(+)-13:101244073(-)__13_101234001_101259001D;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:0:11:-33.01:33.01
13	101244073	682110:2	A	]13:101241852]A	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=682110:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:101241852(+)-13:101244073(-)__13_101234001_101259001D;SPAN=2221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:0:11:-33.01:33.01
13	107584405	916294:1	C	C]22:28669946]	32	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=916294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_142C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:72:32.6:32.6,0,148.1:16:0:-32.58:36.8
13	110928542	684409:1	A	]13:110928733]A	29	PASS	EVDNC=ASSMB;HOMSEQ=ATTT;MAPQ=60;MATEID=684409:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110911501_110936501_0C;SPAN=191;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
13	110928733	684409:2	T	T[13:110928542[	29	PASS	EVDNC=ASSMB;HOMSEQ=ATTT;MAPQ=60;MATEID=684409:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110911501_110936501_0C;SPAN=191;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75
13	110938204	684417:1	G	]13:110938379]G	20	PASS	EVDNC=ASSMB;INSERTION=GCATGTCCTGGAGAAAG;MAPQ=60;MATEID=684417:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110936001_110961001_10C;SPAN=175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77
13	110938379	684417:2	C	C[13:110938204[	20	PASS	EVDNC=ASSMB;INSERTION=GCATGTCCTGGAGAAAG;MAPQ=60;MATEID=684417:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110936001_110961001_10C;SPAN=175;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77
13	111790677	684590:1	T	]13:111790963]T	48	PASS	EVDNC=ASSMB;HOMSEQ=TGTCCATGTCTGTCTGT;MAPQ=60;MATEID=684590:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_13_111769001_111794001_19C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77
13	111790963	684590:2	T	T[13:111790677[	48	PASS	EVDNC=ASSMB;HOMSEQ=TGTCCATGTCTGTCTGT;MAPQ=60;MATEID=684590:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_13_111769001_111794001_19C;SPAN=286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77
13	111793420	684595:1	T	T]Un_JTFH01000010v1_decoy:9358]	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=684595:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_111769001_111794001_29C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91
13	113136637	684857:1	T	T[13:113136950[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATTCTTGTACTTTT;MAPQ=60;MATEID=684857:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_13_113116501_113141501_0C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:11:6:-46.21:46.21
13	113136950	684857:2	A	]13:113136637]A	46	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AATTCTTGTACTTTT;MAPQ=60;MATEID=684857:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_13_113116501_113141501_0C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:11:6:-46.21:46.21
13	113802656	685090:1	A	A[13:113803662[	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=685090:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:113802656(+)-13:113803662(-)__13_113802501_113827501D;SPAN=1006;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41
13	113803662	685090:2	C	]13:113802656]C	59	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=685090:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:113802656(+)-13:113803662(-)__13_113802501_113827501D;SPAN=1006;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41
14	16127970	685851:1	A	A[14:16129237[	11	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=685851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16127970(+)-14:16129237(-)__14_16121001_16146001D;SPAN=1267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:67:11:11,0,156.2:0:9:-10.88:18.53
14	16129237	685851:2	A	]14:16127970]A	11	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=685851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16127970(+)-14:16129237(-)__14_16121001_16146001D;SPAN=1267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:67:11:11,0,156.2:0:9:-10.88:18.53
14	16136222	685870:1	G	G[14:16137856[	7	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=685870:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16136222(+)-14:16137856(-)__14_16121001_16146001D;SPAN=1634;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:103:7.4:7.4,0,251.6:0:11:-7.359:21.48
14	16137856	685870:2	A	]14:16136222]A	7	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=685870:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16136222(+)-14:16137856(-)__14_16121001_16146001D;SPAN=1634;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:103:7.4:7.4,0,251.6:0:11:-7.359:21.48
14	18223617	112281:2	G	[2:132243814[G	95	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=112281:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132243814(-)-14:18223617(-)__2_132226501_132251501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:29:8.7:95.7,8.7,0:0:32:-95.72:95.72
14	20083865	686796:1	A	]14:20200104]A	31	PASS	EVDNC=ASSMB;HOMSEQ=AAATA;MAPQ=60;MATEID=686796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20188001_20213001_24C;SPAN=116239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
14	20200104	686796:2	A	A[14:20083865[	31	PASS	EVDNC=ASSMB;HOMSEQ=AAATA;MAPQ=60;MATEID=686796:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20188001_20213001_24C;SPAN=116239;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
14	20254838	686826:2	A	A]5:53611921]	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAACTT;MAPQ=60;MATEID=686826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20237001_20262001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:7:4:-35.86:35.86
14	20273533	941661:1	C	]X:111769097]C	42	PASS	DISC_MAPQ=54;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=941661:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_111769001_111794001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:9:8:-42.71:42.71
14	21484465	687336:1	C	C[14:21486504[	52	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=687336:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_21486501_21511501_19C;SPAN=2039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81
14	21486504	687336:2	T	]14:21484465]T	52	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=687336:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_21486501_21511501_19C;SPAN=2039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81
14	23900202	688158:1	A	]14:23900406]A	53	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=688158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_23887501_23912501_23C;SPAN=204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:46:53.3:53.3,0,59.9:20:0:-53.09:53.14
14	23900406	688158:2	G	G[14:23900202[	53	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=688158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_23887501_23912501_23C;SPAN=204;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:46:53.3:53.3,0,59.9:20:0:-53.09:53.14
14	24793131	688422:1	G	G[14:24793919[	39	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=688422:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_24769501_24794501_12C;SPAN=788;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41
14	24793919	688422:2	C	]14:24793131]C	39	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=688422:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_24769501_24794501_12C;SPAN=788;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41
14	25677909	688735:1	T	T[14:25678252[	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTAAGGTTTAT;MAPQ=60;MATEID=688735:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_25676001_25701001_30C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:22:7.8:85.8,7.8,0:22:8:-85.82:85.82
14	25678252	688735:2	G	]14:25677909]G	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTAAGGTTTAT;MAPQ=60;MATEID=688735:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_25676001_25701001_30C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:22:7.8:85.8,7.8,0:22:8:-85.82:85.82
14	26232412	688910:1	A	A[14:26232713[	17	PASS	EVDNC=ASSMB;HOMSEQ=GAAAGAAAGAA;MAPQ=60;MATEID=688910:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_26215001_26240001_53C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
14	26232713	688910:2	G	]14:26232412]G	17	PASS	EVDNC=ASSMB;HOMSEQ=GAAAGAAAGAA;MAPQ=60;MATEID=688910:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_26215001_26240001_53C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87
14	29258843	689881:1	T	T[14:29259597[	95	PASS	EVDNC=ASSMB;HOMSEQ=GAGAATTCTTT;MAPQ=60;MATEID=689881:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_29253001_29278001_57C;SPAN=754;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:19:8.7:95.7,8.7,0:32:0:-95.72:95.72
14	29259597	689881:2	G	]14:29258843]G	95	PASS	EVDNC=ASSMB;HOMSEQ=GAGAATTCTTT;MAPQ=60;MATEID=689881:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_29253001_29278001_57C;SPAN=754;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:19:8.7:95.7,8.7,0:32:0:-95.72:95.72
14	29550324	689981:1	T	]14:29597866]T	38	PASS	EVDNC=ASSMB;INSERTION=AATACCTTTACCT;MAPQ=60;MATEID=689981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_29596001_29621001_6C;SPAN=47542;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
14	29597866	689981:2	A	A[14:29550324[	38	PASS	EVDNC=ASSMB;INSERTION=AATACCTTTACCT;MAPQ=60;MATEID=689981:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_29596001_29621001_6C;SPAN=47542;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
14	30183739	690144:1	T	]14:30390239]T	36	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=690144:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30380001_30405001_60C;SPAN=206500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:13:0:-37.05:37.05
14	30390239	690144:2	C	C[14:30183739[	36	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=690144:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30380001_30405001_60C;SPAN=206500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:13:0:-37.05:37.05
14	30517301	690169:1	G	G[14:30517556[	17	PASS	EVDNC=ASSMB;INSERTION=GTGCCAA;MAPQ=60;MATEID=690169:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30502501_30527501_21C;SPAN=255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:8:0:-17.13:18.75
14	30517556	690169:2	A	]14:30517301]A	17	PASS	EVDNC=ASSMB;INSERTION=GTGCCAA;MAPQ=60;MATEID=690169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30502501_30527501_21C;SPAN=255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:33:17.3:17.3,0,63.5:8:0:-17.13:18.75
14	31473803	690512:1	T	T[14:31474115[	24	PASS	EVDNC=ASSMB;HOMSEQ=GCAAATCTTTTCTT;MAPQ=60;MATEID=690512:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_31458001_31483001_77C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
14	31474115	690512:2	G	]14:31473803]G	24	PASS	EVDNC=ASSMB;HOMSEQ=GCAAATCTTTTCTT;MAPQ=60;MATEID=690512:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_31458001_31483001_77C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
14	32157501	690790:1	A	[14:32193596[A	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAC;MAPQ=60;MATEID=690790:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_32193001_32218001_25C;SPAN=36095;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:13:12.8:19.4,0,12.8:5:4:-19.51:19.51
14	32193596	690790:2	A	[14:32157501[A	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAC;MAPQ=60;MATEID=690790:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_32193001_32218001_25C;SPAN=36095;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:13:12.8:19.4,0,12.8:5:4:-19.51:19.51
14	33266964	691140:1	A	]14:33377878]A	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=691140:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_33369001_33394001_65C;SPAN=110914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:9:3:-35.86:35.86
14	33377878	691140:2	A	A[14:33266964[	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=691140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_33369001_33394001_65C;SPAN=110914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:9:3:-35.86:35.86
14	34836097	691617:1	A	A[14:34836416[	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTTTCTATA;MAPQ=60;MATEID=691617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_34814501_34839501_90C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:24:0:59.4,0,0:20:0:-62.69:62.69
14	34836416	691617:2	A	]14:34836097]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAACTTTCTATA;MAPQ=60;MATEID=691617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_34814501_34839501_90C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:24:0:59.4,0,0:20:0:-62.69:62.69
14	34932207	691675:1	A	A[14:34932518[	30	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATTTCA;MAPQ=60;MATEID=691675:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_34912501_34937501_54C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
14	34932518	691675:2	A	]14:34932207]A	30	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAATTTCA;MAPQ=60;MATEID=691675:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_34912501_34937501_54C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
14	35038580	691752:1	C	C[14:35040301[	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=691752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:35038580(+)-14:35040301(-)__14_35035001_35060001D;SPAN=1721;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96
14	35040301	691752:2	A	]14:35038580]A	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=691752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:35038580(+)-14:35040301(-)__14_35035001_35060001D;SPAN=1721;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96
14	37047457	692387:2	G	]4:135304935]G	21	PASS	EVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=692387:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37044001_37069001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63
14	37300358	692473:1	G	G]16:61045452]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=692473:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:37300358(+)-16:61045452(+)__14_37289001_37314001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
14	37562864	692591:1	T	]14:37597657]T	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=692591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37583001_37608001_85C;SPAN=34793;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:33:11.1:122.1,11.1,0:40:0:-122.1:122.1
14	37592330	692637:1	G	]14:37715510]G	32	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GGCT;MAPQ=60;MATEID=692637:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37705501_37730501_45C;SPAN=123180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:8:9:-32.59:32.59
14	37597657	692591:2	T	T[14:37562864[	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=692591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37583001_37608001_85C;SPAN=34793;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:33:11.1:122.1,11.1,0:40:0:-122.1:122.1
14	37715510	692637:2	T	T[14:37592330[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCT;MAPQ=60;MATEID=692637:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37705501_37730501_45C;SPAN=123180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:8:9:-32.59:32.59
14	37776046	692663:1	T	T[14:37776247[	99	PASS	EVDNC=ASSMB;HOMSEQ=TGGGTCTTGATTCTTT;MAPQ=60;MATEID=692663:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_37754501_37779501_67C;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:20:9.6:105.6,9.6,0:35:0:-105.6:105.6
14	37776247	692663:2	T	]14:37776046]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TGGGTCTTGATTCTTT;MAPQ=60;MATEID=692663:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_37754501_37779501_67C;SPAN=201;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:20:9.6:105.6,9.6,0:35:0:-105.6:105.6
14	37777674	692738:1	C	]14:37911211]C	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=692738:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37901501_37926501_37C;SPAN=133537;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:9:6:-24.86:25.27
14	37911211	692738:2	C	C[14:37777674[	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=692738:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37901501_37926501_37C;SPAN=133537;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:29:24.8:24.8,0,47.9:9:6:-24.86:25.27
14	38174306	692839:1	C	C[14:38174608[	52	PASS	EVDNC=ASSMB;HOMSEQ=CACCCTGTGCCTTTTC;MAPQ=60;MATEID=692839:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_38171001_38196001_77C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:25:9.5:52.4,0,9.5:18:0:-53.96:53.96
14	38174608	692839:2	C	]14:38174306]C	52	PASS	EVDNC=ASSMB;HOMSEQ=CACCCTGTGCCTTTTC;MAPQ=60;MATEID=692839:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_38171001_38196001_77C;SPAN=302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:25:9.5:52.4,0,9.5:18:0:-53.96:53.96
14	39033514	693049:1	T	]14:39033642]T	85	PASS	EVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=693049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39028501_39053501_78C;SPAN=128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:61:65.6:85.4,0,65.6:31:0:-85.28:85.28
14	39033642	693049:2	A	A[14:39033514[	85	PASS	EVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=693049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39028501_39053501_78C;SPAN=128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:61:65.6:85.4,0,65.6:31:0:-85.28:85.28
14	39411765	693274:1	C	]14:39412419]C	16	PASS	EVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=693274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39396001_39421001_45C;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:47:16.7:16.7,0,99.2:9:0:-16.5:20.04
14	39412419	693274:2	C	C[14:39411765[	16	PASS	EVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=693274:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39396001_39421001_45C;SPAN=654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:47:16.7:16.7,0,99.2:9:0:-16.5:20.04
14	39629205	693352:1	T	T[14:39631010[	56	PASS	EVDNC=ASSMB;HOMSEQ=AGAGTCCTGAAATAACTT;MAPQ=60;MATEID=693352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39616501_39641501_23C;SPAN=1805;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:33:23.9:56.9,0,23.9:20:0:-57.35:57.35
14	39631010	693352:2	A	]14:39629205]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AGAGTCCTGAAATAACTT;MAPQ=60;MATEID=693352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39616501_39641501_23C;SPAN=1805;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:33:23.9:56.9,0,23.9:20:0:-57.35:57.35
14	40140611	693536:1	A	A[14:40148469[	99	PASS	EVDNC=ASSMB;INSERTION=CAGGCTCCTTTGTAAATAA;MAPQ=60;MATEID=693536:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_14_40131001_40156001_3C;SPAN=7858;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7
14	40148469	693536:2	T	]14:40140611]T	99	PASS	EVDNC=ASSMB;INSERTION=CAGGCTCCTTTGTAAATAA;MAPQ=60;MATEID=693536:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_14_40131001_40156001_3C;SPAN=7858;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7
14	40498185	693818:1	A	A]14:40771514]	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CT;MAPQ=60;MATEID=693818:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_40768001_40793001_9C;SPAN=273329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:15:18.8:18.8,0,18.8:6:2:-18.89:18.89
14	40498855	693697:1	T	T[14:40559038[	38	PASS	EVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=693697:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_40547501_40572501_2C;SPAN=60183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:13:0:-39.01:39.01
14	40559038	693697:2	A	]14:40498855]A	38	PASS	EVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=693697:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_40547501_40572501_2C;SPAN=60183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:13:0:-39.01:39.01
14	40771514	693818:2	C	C]14:40498185]	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CT;MAPQ=60;MATEID=693818:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_40768001_40793001_9C;SPAN=273329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:15:18.8:18.8,0,18.8:6:2:-18.89:18.89
14	40906937	693878:1	T	T]14:40907574]	56	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=693878:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:40906937(+)-14:40907574(+)__14_40890501_40915501D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:34:26.9:56.6,0,26.9:0:20:-56.93:56.93
14	40907574	693878:2	T	T]14:40906937]	56	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=693878:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:40906937(+)-14:40907574(+)__14_40890501_40915501D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:34:26.9:56.6,0,26.9:0:20:-56.93:56.93
14	41200462	703848:1	G	]14:69277912]G	18	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCC;MAPQ=60;MATEID=703848:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_69261501_69286501_67C;SPAN=28077450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:16:18.8:18.8,0,18.8:1:7:-18.61:18.62
14	42279188	694411:1	T	T[14:42279553[	1	PASS	EVDNC=ASSMB;HOMSEQ=AAGTGCTGGGATTACAGGCGTGAGCCACCGT;MAPQ=60;MATEID=694411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42262501_42287501_0C;SPAN=365;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:41:1.7:1.7,0,100.7:4:0:-1.679:7.644
14	42279553	694411:2	A	]14:42279188]A	1	PASS	EVDNC=ASSMB;HOMSEQ=AAGTGCTGGGATTACAGGCGTGAGCCACCGT;MAPQ=60;MATEID=694411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42262501_42287501_0C;SPAN=365;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:41:1.7:1.7,0,100.7:4:0:-1.679:7.644
14	42291888	694422:1	T	T[14:42292221[	78	PASS	EVDNC=ASSMB;HOMSEQ=AAAATAAAAAATTTT;MAPQ=60;MATEID=694422:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_14_42287001_42312001_18C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25
14	42292221	694422:2	A	]14:42291888]A	78	PASS	EVDNC=ASSMB;HOMSEQ=AAAATAAAAAATTTT;MAPQ=60;MATEID=694422:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_14_42287001_42312001_18C;SPAN=333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25
14	42561542	694524:2	T	[5:1364018[T	39	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=694524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42556501_42581501_72C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:5:11:-39.39:39.39
14	44082765	707096:1	T	[14:77757284[T	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=707096:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_77738501_77763501_83C;SPAN=33674519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:15:3:-48.1:48.1
14	44119784	695089:1	A	A[14:44122512[	36	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=695089:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:44119784(+)-14:44122512(-)__14_44100001_44125001D;SPAN=2728;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66
14	44122512	695089:2	A	]14:44119784]A	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=695089:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:44119784(+)-14:44122512(-)__14_44100001_44125001D;SPAN=2728;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66
14	44417492	695199:1	C	C[14:44417494[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATCTCTAGA;INSERTION=TTCCTGGTCAGTAAGACCTCAAAAGGTTAAATACTAACAACTTACACACCTTAAATGTTTATCAAAAATTACTGGGCAATATTAATTGGCTTCACTCCACCTTGGGCATAACTACTGATAAGTTACAAAACCTGTTTTCTACCCTAAAGGGCAATATAGCCCTACACTGTCCCAGGTATTTAACTCCTGCAGCAAAAAGGGAAATTGAGGAAGTAGAGCAAGCTCTTTCTCGGAGGCAACTAGATCGCATAGACCCATGATATTCAGTTCAATAGTTTGTTTTTCTTAGTAAACATTCCCTAACAGGATTAATAAGATAGATGGCCCCAGGGCTATGCTTCCTAGAATGGGTTTTTTGCTCACTTACCAGGACTAAAACACTATCTCCCTACATCCAGCTAGTTAGTAAAGTTATCTATACAGGCCACAGATGATGCCATCAGTTGCTAGGTTATGACCCTGAGGTCATAAGAATTCCTTGAGTAAAAAGTAATTCGAAGCAGTATTGCCCT;MAPQ=60;MATEID=695199:2;MATENM=0;NM=1;NUMPARTS=5;SCTG=c_14_44394001_44419001_79C;SECONDARY;SPAN=2;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:40:11.4:125.4,11.4,0:41:0:-125.4:125.4
14	44417494	695199:2	T	]14:44417492]T	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATCTCTAGA;INSERTION=TTCCTGGTCAGTAAGACCTCAAAAGGTTAAATACTAACAACTTACACACCTTAAATGTTTATCAAAAATTACTGGGCAATATTAATTGGCTTCACTCCACCTTGGGCATAACTACTGATAAGTTACAAAACCTGTTTTCTACCCTAAAGGGCAATATAGCCCTACACTGTCCCAGGTATTTAACTCCTGCAGCAAAAAGGGAAATTGAGGAAGTAGAGCAAGCTCTTTCTCGGAGGCAACTAGATCGCATAGACCCATGATATTCAGTTCAATAGTTTGTTTTTCTTAGTAAACATTCCCTAACAGGATTAATAAGATAGATGGCCCCAGGGCTATGCTTCCTAGAATGGGTTTTTTGCTCACTTACCAGGACTAAAACACTATCTCCCTACATCCAGCTAGTTAGTAAAGTTATCTATACAGGCCACAGATGATGCCATCAGTTGCTAGGTTATGACCCTGAGGTCATAAGAATTCCTTGAGTAAAAAGTAATTCGAAGCAGTATTGCCCT;MAPQ=60;MATEID=695199:1;MATENM=1;NM=0;NUMPARTS=5;SCTG=c_14_44394001_44419001_79C;SECONDARY;SPAN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:40:11.4:125.4,11.4,0:41:0:-125.4:125.4
14	45854840	861822:1	A	A]20:6368548]	27	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=861822:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:45854840(+)-20:6368548(+)__20_6345501_6370501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
14	46108735	695643:1	G	G[14:46109041[	56	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCCTCCAATTG;MAPQ=60;MATEID=695643:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46109001_46134001_13C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11
14	46109041	695643:2	A	]14:46108735]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGCCTCCAATTG;MAPQ=60;MATEID=695643:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46109001_46134001_13C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11
14	46648665	701678:1	G	[14:62759566[G	99	PASS	DISC_MAPQ=31;EVDNC=ASDIS;MAPQ=41;MATEID=701678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_62744501_62769501_35C;SPAN=16110901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:17:10.5:115.5,10.5,0:31:15:-115.5:115.5
14	46956857	695916:1	T	]14:46957155]T	1	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=695916:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46942001_46967001_19C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:43:1.1:1.1,0,106.7:4:0:-1.117:7.557
14	46957155	695916:2	T	T[14:46956857[	1	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=695916:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46942001_46967001_19C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:43:1.1:1.1,0,106.7:4:0:-1.117:7.557
14	47514459	820233:1	G	G]18:6432646]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820233:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47514459(+)-18:6432646(+)__18_6419001_6444001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
14	47597634	696119:1	A	A[14:47598663[	29	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=696119:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_47579001_47604001_3C;SPAN=1029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
14	47598663	696119:2	T	]14:47597634]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=696119:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_47579001_47604001_3C;SPAN=1029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3
14	47694624	820234:1	T	[18:6432597[T	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=820234:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_6419001_6444001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:11:5:-46.21:46.21
14	47771434	696185:1	C	C[X:150398269[	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=696185:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771434(+)-23:150398269(-)__14_47750501_47775501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
14	47771706	948160:1	A	]X:150398432]A	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=948160:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771706(-)-23:150398432(+)__23_150381001_150406001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11
14	48882209	696542:1	C	C[14:49023146[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAAC;INSERTION=TTAAATAGTTATTTTCAAATAACTTGATGTGATTGTGGAAAACAGTGATAGACAAATCAAAATGACCTCCAACTATAAAGAAAATTCTTGAGCCA;MAPQ=0;MATEID=696542:2;MATENM=1;NM=5;NUMPARTS=2;REPSEQ=CC;SCTG=c_14_48877501_48902501_3C;SECONDARY;SPAN=140937;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:35:8:-118.8:118.8
14	49023146	696542:2	G	]14:48882209]G	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAAC;INSERTION=TTAAATAGTTATTTTCAAATAACTTGATGTGATTGTGGAAAACAGTGATAGACAAATCAAAATGACCTCCAACTATAAAGAAAATTCTTGAGCCA;MAPQ=60;MATEID=696542:1;MATENM=5;NM=1;NUMPARTS=2;REPSEQ=CC;SCTG=c_14_48877501_48902501_3C;SECONDARY;SPAN=140937;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:35:8:-118.8:118.8
14	49725332	696842:1	A	]14:49725627]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAAAAATAATAATGTAATAAACTGCAAAAATT;MAPQ=60;MATEID=696842:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_14_49710501_49735501_8C;SPAN=295;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:86:98:117.8,0,98:42:9:-117.9:117.9
14	49725627	696842:2	T	T[14:49725332[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAAAAATAATAATGTAATAAACTGCAAAAATT;MAPQ=60;MATEID=696842:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_14_49710501_49735501_8C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:86:98:117.8,0,98:42:9:-117.9:117.9
14	50942183	697371:1	C	C[14:50942828[	79	PASS	DISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TCTGTCTC;MAPQ=60;MATEID=697371:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_50935501_50960501_74C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:16:18:-78.56:78.56
14	50942828	697371:2	A	]14:50942183]A	79	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TCTGTCTC;MAPQ=60;MATEID=697371:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_50935501_50960501_74C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:16:18:-78.56:78.56
14	51134695	697453:1	T	T[14:51134990[	46	PASS	EVDNC=ASSMB;HOMSEQ=TTTTTTTTT;MAPQ=60;MATEID=697453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_51131501_51156501_45C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:16:0:-48.1:48.1
14	51134990	697453:2	T	]14:51134695]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TTTTTTTTT;MAPQ=60;MATEID=697453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_51131501_51156501_45C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:16:0:-48.1:48.1
14	52201132	697857:2	G	G[4:169359842[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=697857:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:169359842(-)-14:52201132(+)__14_52185001_52210001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21
14	52425216	697955:2	T	]4:60231729]T	26	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=697955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_52405501_52430501_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29
14	52475035	933494:1	A	]X:64507376]A	42	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=933494:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_23_64484001_64509001_20C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:10:9:-42.91:42.91
14	52476005	697967:2	T	T[4:60232158[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=697967:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_52454501_52479501_37C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:25:22.7:22.7,0,39.2:7:8:-22.68:22.95
14	54243631	698723:1	A	A[14:54246968[	34	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=698723:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54243001_54268001_35C;SPAN=3337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:30:34.4:34.4,0,41:13:0:-34.48:34.51
14	54246968	698723:2	T	]14:54243631]T	34	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=698723:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54243001_54268001_35C;SPAN=3337;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:30:34.4:34.4,0,41:13:0:-34.48:34.51
14	54749560	698839:2	G	]4:153256883]G	22	PASS	EVDNC=ASSMB;INSERTION=CAAAACGCTAACAAAATAAATAG;MAPQ=60;MATEID=698839:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54733001_54758001_25C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:25:22.7:22.7,0,39.2:9:0:-22.68:22.95
14	54941811	13082:2	A	]1:53955314]A	28	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=13082:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53955314(+)-14:54941811(-)__1_53949001_53974001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
14	55912669	699197:2	C	C[4:153172444[	36	PASS	DISC_MAPQ=58;EVDNC=ASDIS;MAPQ=60;MATEID=699197:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_55909001_55934001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:11:9:-36.66:36.66
14	56200143	699337:1	A	]14:56200312]A	52	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=699337:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_56178501_56203501_117C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:21:0:-51.89:52.86
14	56200312	699337:2	T	T[14:56200143[	52	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=699337:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_56178501_56203501_117C;SPAN=169;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:21:0:-51.89:52.86
14	57720286	699947:1	C	]22:28669457]C	19	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=699947:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_57697501_57722501_12C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
14	57720286	916297:1	C	[22:28669458[C	18	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=CA;INSERTION=GTGACTGAATCCCAAAATTATATTGGTAACATGGAAATTCCTGATAGGGGAAGAATATTCCCAGAAGTGTGACCAGTTAGGGCCAAAATAAAAGGTA;MAPQ=60;MATEID=916297:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_22_28665001_28690001_91C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:111:18.5:18.5,0,259.4:15:2:-18.31:30.92
14	59078595	700449:1	G	G[14:59078888[	31	PASS	EVDNC=ASSMB;HOMSEQ=AAATAATACTTTTAG;MAPQ=60;MATEID=700449:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_59069501_59094501_45C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
14	59078888	700449:2	A	]14:59078595]A	31	PASS	EVDNC=ASSMB;HOMSEQ=AAATAATACTTTTAG;MAPQ=60;MATEID=700449:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_59069501_59094501_45C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54
14	60447081	700919:1	A	[14:60474536[A	31	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=700919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:60447081(-)-14:60474536(-)__14_60466001_60491001D;SPAN=27455;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06
14	60474536	700919:2	T	[14:60447081[T	31	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=700919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:60447081(-)-14:60474536(-)__14_60466001_60491001D;SPAN=27455;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06
14	61081182	701090:1	A	]14:61081313]A	44	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701090:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61078501_61103501_19C;SPAN=131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:54:44.3:44.3,0,90.5:18:0:-44.24:45.15
14	61081313	701090:2	A	A[14:61081182[	44	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701090:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61078501_61103501_19C;SPAN=131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:54:44.3:44.3,0,90.5:18:0:-44.24:45.15
14	61172785	701114:1	A	]14:61172905]A	74	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701114:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61152001_61177001_23C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:63:74.9:74.9,0,81.5:28:0:-74.72:74.75
14	61172905	701114:2	A	A[14:61172785[	74	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701114:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61152001_61177001_23C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:63:74.9:74.9,0,81.5:28:0:-74.72:74.75
14	62759566	701678:2	A	[14:46648665[A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=701678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_62744501_62769501_35C;SPAN=16110901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:17:10.5:115.5,10.5,0:31:15:-115.5:115.5
14	63420770	701926:1	A	A[14:63421085[	53	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGTCAACCTGA;MAPQ=60;MATEID=701926:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_63406001_63431001_6C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
14	63421085	701926:2	A	]14:63420770]A	53	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAGTCAACCTGA;MAPQ=60;MATEID=701926:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_63406001_63431001_6C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
14	64280428	702277:2	G	]9:30288184]G	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=702277:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_64263501_64288501_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
14	64280468	809228:1	G	G[17:57501629[	21	PASS	EVDNC=ASSMB;INSERTION=AGAACTTGTTTTATTCACCTCATCCC;MAPQ=60;MATEID=809228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_57501501_57526501_45C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11
14	64893678	702536:1	C	C[14:64896823[	64	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTTC;MAPQ=60;MATEID=702536:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_14_64876001_64901001_87C;SPAN=3145;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69
14	64896823	702536:2	A	]14:64893678]A	64	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTTTC;MAPQ=60;MATEID=702536:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_14_64876001_64901001_87C;SPAN=3145;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69
14	64980572	702567:2	G	]2:193680440]G	44	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702567:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:193680440(+)-14:64980572(-)__14_64974001_64999001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:31:31.1:44.3,0,31.1:0:16:-44.17:44.17
14	65139670	702623:1	C	C[14:65141330[	99	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=GGTTCAAGCGATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=702623:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_65121001_65146001_14C;SPAN=1660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:33:12.3:135.3,12.3,0:26:28:-135.3:135.3
14	65141330	702623:2	G	]14:65139670]G	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGTTCAAGCGATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=702623:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_65121001_65146001_14C;SPAN=1660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:33:12.3:135.3,12.3,0:26:28:-135.3:135.3
14	65375817	702738:1	G	[14:65376623[G	33	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=702738:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375817(-)-14:65376623(-)__14_65366001_65391001D;SPAN=806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58
14	65375930	702740:1	A	A]14:65376501]	79	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375930(+)-14:65376501(+)__14_65366001_65391001D;SPAN=571;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:0:26:-79.22:79.22
14	65376501	702740:2	C	C]14:65375930]	79	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=702740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375930(+)-14:65376501(+)__14_65366001_65391001D;SPAN=571;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:26:7.2:79.2,7.2,0:0:26:-79.22:79.22
14	65376623	702738:2	G	[14:65375817[G	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702738:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375817(-)-14:65376623(-)__14_65366001_65391001D;SPAN=806;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58
14	65433282	702815:1	T	]14:65599914]T	32	PASS	EVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=702815:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_65586501_65611501_53C;SPAN=166632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:27:32:32,0,35.3:12:0:-32.02:32.04
14	65599914	702815:2	T	T[14:65433282[	32	PASS	EVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=702815:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_65586501_65611501_53C;SPAN=166632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:27:32:32,0,35.3:12:0:-32.02:32.04
14	65602452	702822:1	G	G[14:65611229[	53	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=702822:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65602452(+)-14:65611229(-)__14_65611001_65636001D;SPAN=8777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:32:24.2:53.9,0,24.2:0:19:-54.21:54.21
14	65611229	702822:2	A	]14:65602452]A	53	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=702822:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65602452(+)-14:65611229(-)__14_65611001_65636001D;SPAN=8777;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:32:24.2:53.9,0,24.2:0:19:-54.21:54.21
14	68136341	703476:1	C	C[14:68137015[	78	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=703476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_68134501_68159501_47C;SPAN=674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25
14	68137015	703476:2	C	]14:68136341]C	78	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=703476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_68134501_68159501_47C;SPAN=674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25
14	68441295	703565:1	C	C]14:68831305]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=703565:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:68441295(+)-14:68831305(+)__14_68428501_68453501D;SPAN=390010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
14	68831305	703565:2	T	T]14:68441295]	22	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=703565:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:68441295(+)-14:68831305(+)__14_68428501_68453501D;SPAN=390010;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25
14	69277912	703848:2	C	C[14:41200462[	18	PASS	DISC_MAPQ=26;EVDNC=ASDIS;HOMSEQ=GCC;MAPQ=60;MATEID=703848:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_69261501_69286501_67C;SPAN=28077450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:16:18.8:18.8,0,18.8:1:7:-18.61:18.62
14	69313596	703864:1	C	]14:69313758]C	47	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=703864:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_69310501_69335501_58C;SPAN=162;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:56:47:47,0,93.2:19:0:-46.98:47.84
14	69313758	703864:2	G	G[14:69313596[	47	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=703864:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_69310501_69335501_58C;SPAN=162;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:56:47:47,0,93.2:19:0:-46.98:47.84
14	72112667	704667:1	G	]14:72167699]G	40	PASS	EVDNC=ASSMB;INSERTION=TAGTGCTAAAATA;MAPQ=60;MATEID=704667:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_72152501_72177501_19C;SPAN=55032;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
14	72167699	704667:2	A	A[14:72112667[	40	PASS	EVDNC=ASSMB;INSERTION=TAGTGCTAAAATA;MAPQ=60;MATEID=704667:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_72152501_72177501_19C;SPAN=55032;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11
14	72444798	704776:1	C	]14:72444882]C	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CACCTGTTCAACCCTGGGGAGAAGACCCCAGGTTGGTGACCCCTGGTTTAGGACCA;MAPQ=60;MATEID=704776:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_14_72422001_72447001_10C;SPAN=84;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:64:41.6:117.5,0,41.6:41:0:-119.2:119.2
14	72444882	704776:2	C	C[14:72444798[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CACCTGTTCAACCCTGGGGAGAAGACCCCAGGTTGGTGACCCCTGGTTTAGGACCA;MAPQ=60;MATEID=704776:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_14_72422001_72447001_10C;SPAN=84;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:64:41.6:117.5,0,41.6:41:0:-119.2:119.2
14	72639639	704857:1	A	A[14:72640358[	46	PASS	EVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=704857:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_72618001_72643001_54C;SPAN=719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
14	72640358	704857:2	C	]14:72639639]C	46	PASS	EVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=704857:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_72618001_72643001_54C;SPAN=719;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99
14	76216190	330018:2	G	[6:19764886[G	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=330018:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:14:8.4:92.4,8.4,0:28:15:-92.42:92.42
14	76531614	706461:1	G	G[14:76532816[	38	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=706461:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_76513501_76538501_40C;SPAN=1202;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03
14	76532816	706461:2	C	]14:76531614]C	38	PASS	EVDNC=ASSMB;HOMSEQ=CAG;MAPQ=55;MATEID=706461:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_76513501_76538501_40C;SPAN=1202;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03
14	77757284	707096:2	A	[14:44082765[A	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=707096:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_77738501_77763501_83C;SPAN=33674519;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:15:3:-48.1:48.1
14	77757579	707094:2	G	G[11:66609733[	20	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=707094:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:66609733(-)-14:77757579(+)__14_77738501_77763501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:0:8:-20.79:20.87
14	81002783	708144:1	T	T[14:81003084[	0	PASS	EVDNC=ASSMB;HOMSEQ=CTAATGCCTCTT;MAPQ=60;MATEID=708144:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_80997001_81022001_41C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:341:42.8:0,42.8,944:16:0:43.04:25.33
14	81003084	708144:2	C	]14:81002783]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CTAATGCCTCTT;MAPQ=60;MATEID=708144:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_80997001_81022001_41C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:341:42.8:0,42.8,944:16:0:43.04:25.33
14	81320430	592458:2	A	]11:62074341]A	99	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=592458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62058501_62083501_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:31:9:99,9,0:33:0:-99.02:99.02
14	81411867	708297:1	G	G[14:81414269[	69	PASS	EVDNC=ASSMB;INSERTION=CAGAGTTAAGATAAGCA;MAPQ=60;MATEID=708297:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81413501_81438501_5C;SPAN=2402;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
14	81414269	708297:2	G	]14:81411867]G	69	PASS	EVDNC=ASSMB;INSERTION=CAGAGTTAAGATAAGCA;MAPQ=60;MATEID=708297:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81413501_81438501_5C;SPAN=2402;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32
14	81668843	708414:1	C	]14:81762140]C	18	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=708414:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81756501_81781501_108C;SPAN=93297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
14	81762140	708414:2	C	C[14:81668843[	18	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=708414:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81756501_81781501_108C;SPAN=93297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57
14	81817963	708444:1	T	]14:81818083]T	36	PASS	EVDNC=ASSMB;INSERTION=CCTTCCTTTCT;MAPQ=22;MATEID=708444:2;MATENM=7;NM=4;NUMPARTS=2;SCTG=c_14_81805501_81830501_94C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:46:36.8:36.8,0,76.4:15:0:-36.59:37.45
14	81818083	708444:2	T	T[14:81817963[	36	PASS	EVDNC=ASSMB;INSERTION=CCTTCCTTTCT;MAPQ=60;MATEID=708444:1;MATENM=4;NM=7;NUMPARTS=2;SCTG=c_14_81805501_81830501_94C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:46:36.8:36.8,0,76.4:15:0:-36.59:37.45
14	81939555	708465:1	G	]14:81942886]G	17	PASS	EVDNC=ASSMB;INSERTION=CCAA;MAPQ=60;MATEID=708465:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81928001_81953001_22C;SPAN=3331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24
14	81942886	708465:2	A	A[14:81939555[	17	PASS	EVDNC=ASSMB;INSERTION=CCAA;MAPQ=60;MATEID=708465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81928001_81953001_22C;SPAN=3331;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24
14	82032766	708490:1	T	T[14:82036987[	22	PASS	EVDNC=ASSMB;INSERTION=AACATAAATC;MAPQ=60;MATEID=708490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_82026001_82051001_54C;SPAN=4221;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
14	82036987	708490:2	A	]14:82032766]A	22	PASS	EVDNC=ASSMB;INSERTION=AACATAAATC;MAPQ=60;MATEID=708490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_82026001_82051001_54C;SPAN=4221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
14	83169509	708910:1	T	T[14:83170140[	50	PASS	EVDNC=ASSMB;HOMSEQ=TCCAAAGACCTTTATTT;MAPQ=60;MATEID=708910:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_83153001_83178001_88C;SPAN=631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
14	83170140	708910:2	T	]14:83169509]T	50	PASS	EVDNC=ASSMB;HOMSEQ=TCCAAAGACCTTTATTT;MAPQ=60;MATEID=708910:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_83153001_83178001_88C;SPAN=631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66
14	83385696	708989:1	A	A[14:83386020[	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=708989:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83373501_83398501_6C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:15:0:-43.34:43.34
14	83386020	708989:2	C	]14:83385696]C	42	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=708989:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83373501_83398501_6C;SPAN=324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:24:16.4:42.8,0,16.4:15:0:-43.34:43.34
14	83666619	709085:1	T	]14:83678044]T	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=709085:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83643001_83668001_20C;SPAN=11425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:12:14:-48.77:48.77
14	83678044	709085:2	T	T[14:83666619[	48	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=709085:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83643001_83668001_20C;SPAN=11425;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:28:21.8:48.2,0,21.8:12:14:-48.77:48.77
14	84012128	709223:1	C	]14:84017566]C	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=709223:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84010501_84035501_3C;SPAN=5438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:5:9:-26.4:28.44
14	84017566	709223:2	A	A[14:84012128[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=709223:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84010501_84035501_3C;SPAN=5438;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:47:26.6:26.6,0,89.3:5:9:-26.4:28.44
14	84672802	709441:1	A	A[14:84673282[	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=709441:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_84672001_84697001_149C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:24:7.8:85.8,7.8,0:17:19:-85.82:85.82
14	84673282	709441:2	A	]14:84672802]A	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=709441:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_84672001_84697001_149C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:24:7.8:85.8,7.8,0:17:19:-85.82:85.82
14	84860828	709538:1	G	]14:84867210]G	18	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=709538:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84843501_84868501_49C;SPAN=6382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65
14	84867210	709538:2	A	A[14:84860828[	18	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=709538:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84843501_84868501_49C;SPAN=6382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65
14	84948633	709567:1	A	]14:84948843]A	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=709567:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84941501_84966501_40C;SPAN=210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:53:21.5:21.5,0,110.6:11:0:-21.41:24.93
14	84948843	709567:2	A	A[14:84948633[	21	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=709567:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84941501_84966501_40C;SPAN=210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:53:21.5:21.5,0,110.6:11:0:-21.41:24.93
14	86616493	710249:1	A	]14:86637764]A	35	PASS	EVDNC=ASSMB;HOMSEQ=AGGG;MAPQ=60;MATEID=710249:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_86632001_86657001_52C;SPAN=21271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
14	86637764	710249:2	G	G[14:86616493[	35	PASS	EVDNC=ASSMB;HOMSEQ=AGGG;MAPQ=60;MATEID=710249:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_86632001_86657001_52C;SPAN=21271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63
14	87380711	710517:1	A	]14:87382035]A	42	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=710517:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_6C;SPAN=1324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:59:42.8:42.8,0,105.5:18:0:-42.83:44.31
14	87382035	710517:2	A	A[14:87380711[	42	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=710517:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_6C;SPAN=1324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:59:42.8:42.8,0,105.5:18:0:-42.83:44.31
14	87391720	710518:1	T	T[14:87392040[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAATCGT;MAPQ=60;MATEID=710518:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_8C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:23:9.6:105.6,9.6,0:35:0:-105.6:105.6
14	87392040	710518:2	A	]14:87391720]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAATCGT;MAPQ=60;MATEID=710518:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_8C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:23:9.6:105.6,9.6,0:35:0:-105.6:105.6
14	88942494	711024:1	C	C[14:88942735[	79	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAAGCTC;MAPQ=60;MATEID=711024:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_88935001_88960001_17C;SPAN=241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31
14	88942735	711024:2	C	]14:88942494]C	79	PASS	EVDNC=ASSMB;HOMSEQ=CCAAAAGCTC;MAPQ=60;MATEID=711024:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_88935001_88960001_17C;SPAN=241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31
14	96428716	714013:1	A	]14:96515169]A	61	PASS	DISC_MAPQ=44;EVDNC=ASDIS;INSERTION=TTAATTTTTTAATTTTAAATGATTTAATTTTAA;MAPQ=60;MATEID=714013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_96505501_96530501_12C;SPAN=86453;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:27:5.6:61.7,0,5.6:19:9:-64.38:64.38
14	96515169	714013:2	T	T[14:96428716[	61	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTTTTTAATTTTAAATGATTTAATTTTAA;MAPQ=60;MATEID=714013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_96505501_96530501_12C;SPAN=86453;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:27:5.6:61.7,0,5.6:19:9:-64.38:64.38
14	98308198	714618:1	G	G[14:98308510[	47	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAGGAGGAGGGAG;MAPQ=60;MATEID=714618:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_98294001_98319001_62C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03
14	98308510	714618:2	A	]14:98308198]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAGGAGGAGGGAG;MAPQ=60;MATEID=714618:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_98294001_98319001_62C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03
14	98317666	714629:1	T	T[14:98318751[	41	PASS	EVDNC=ASSMB;HOMSEQ=ATTATGAATTGAAAGATTTTTTT;MAPQ=60;MATEID=714629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_98318501_98343501_158C;SPAN=1085;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
14	98318751	714629:2	A	]14:98317666]A	41	PASS	EVDNC=ASSMB;HOMSEQ=ATTATGAATTGAAAGATTTTTTT;MAPQ=60;MATEID=714629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_98318501_98343501_158C;SPAN=1085;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
14	101524539	715689:1	A	A[14:101524866[	24	PASS	EVDNC=ASSMB;HOMSEQ=TTTGCCATTA;MAPQ=60;MATEID=715689:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_101503501_101528501_21C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
14	101524866	715689:2	T	]14:101524539]T	24	PASS	EVDNC=ASSMB;HOMSEQ=TTTGCCATTA;MAPQ=60;MATEID=715689:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_101503501_101528501_21C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09
14	101998996	715900:1	C	]14:102036556]C	51	PASS	EVDNC=ASSMB;INSERTION=TATAGTCCCAGA;MAPQ=60;MATEID=715900:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_102018001_102043001_94C;SPAN=37560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
14	102036556	715900:2	A	A[14:101998996[	51	PASS	EVDNC=ASSMB;INSERTION=TATAGTCCCAGA;MAPQ=60;MATEID=715900:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_102018001_102043001_94C;SPAN=37560;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37
14	103842390	716565:2	C	[11:66496959[C	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGG;MAPQ=60;MATEID=716565:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103831001_103856001_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:10:5:-34.32:34.32
14	103896552	716586:1	A	]14:103896896]A	4	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=716586:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:103896552(-)-14:103896896(+)__14_103880001_103905001D;SPAN=344;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:78:4.7:4.7,0,189.5:0:8:-4.483:15.47
14	103896896	716586:2	C	C[14:103896552[	4	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=716586:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:103896552(-)-14:103896896(+)__14_103880001_103905001D;SPAN=344;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:78:4.7:4.7,0,189.5:0:8:-4.483:15.47
14	103910481	716602:2	G	G]11:66501326]	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=716602:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103904501_103929501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:8:6:-33.92:33.92
14	104206456	716693:2	G	]2:237623393]G	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=716693:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_104198501_104223501_154C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55
14	104950889	717030:1	G	G[14:104951841[	29	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=717030:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:104950889(+)-14:104951841(-)__14_104933501_104958501D;SPAN=952;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:0:12:-29.21:29.92
14	104951841	717030:2	C	]14:104950889]C	29	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=717030:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:104950889(+)-14:104951841(-)__14_104933501_104958501D;SPAN=952;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:0:12:-29.21:29.92
14	105162463	717131:1	C	]14:105162670]C	29	PASS	EVDNC=ASSMB;HOMSEQ=CCAGGGCACCTTAAAGCCCAGG;MAPQ=60;MATEID=717131:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_105154001_105179001_66C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:85:29:29,0,184.1:16:0:-28.92:35.5
14	105162670	717131:2	G	G[14:105162463[	29	PASS	EVDNC=ASSMB;HOMSEQ=CCAGGGCACCTTAAAGCCCAGG;MAPQ=60;MATEID=717131:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_105154001_105179001_66C;SPAN=207;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:85:29:29,0,184.1:16:0:-28.92:35.5
14	105573461	717396:1	C	C[14:105693709[	52	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=717396:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105573461(+)-14:105693709(-)__14_105693001_105718001D;SPAN=120248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:14:4.8:52.8,4.8,0:0:18:-52.81:52.81
14	105623442	717296:1	C	C[14:105642051[	5	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=717296:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105623442(+)-14:105642051(-)__14_105619501_105644501D;SPAN=18609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:99:5.3:5.3,0,242.9:0:10:-5.182:19.27
14	105642051	717296:2	T	]14:105623442]T	5	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=717296:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105623442(+)-14:105642051(-)__14_105619501_105644501D;SPAN=18609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:99:5.3:5.3,0,242.9:0:10:-5.182:19.27
14	105646374	717325:1	T	]14:105646476]T	26	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCCTCCCACCGGCCCTGCTCACCTGTGGCTGC;MAPQ=11;MATEID=717325:2;MATENM=1;NM=3;NUMPARTS=3;REPSEQ=CC;SCTG=c_14_105619501_105644501_306C;SPAN=102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:0:2.4:26.4,2.4,0:9:0:-26.41:26.41
14	105646476	717325:2	C	C[14:105646374[	26	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCCTCCCACCGGCCCTGCTCACCTGTGGCTGC;MAPQ=60;MATEID=717325:1;MATENM=3;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_14_105619501_105644501_306C;SPAN=102;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:0:2.4:26.4,2.4,0:9:0:-26.41:26.41
14	105693709	717396:2	A	]14:105573461]A	52	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=717396:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105573461(+)-14:105693709(-)__14_105693001_105718001D;SPAN=120248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:14:4.8:52.8,4.8,0:0:18:-52.81:52.81
14	106249864	717675:2	C	]4:148637296]C	18	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=717675:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106232001_106257001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87
14	106300357	717708:1	T	T[14:106300677[	83	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGAATTTTTCATTTCTTTT;MAPQ=60;MATEID=717708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106281001_106306001_124C;SPAN=320;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:54:50.9:83.9,0,50.9:24:6:-84.25:84.25
14	106300677	717708:2	C	]14:106300357]C	83	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CGAATTTTTCATTTCTTTT;MAPQ=41;MATEID=717708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106281001_106306001_124C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:54:50.9:83.9,0,50.9:24:6:-84.25:84.25
14	106727963	718064:1	A	A[14:106775262[	99	PASS	EVDNC=ASSMB;HOMSEQ=ACAGA;MAPQ=60;MATEID=718064:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_14_106771001_106796001_94C;SPAN=47299;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:25:9.9:108.9,9.9,0:36:0:-108.9:108.9
14	106775262	718064:2	A	]14:106727963]A	99	PASS	EVDNC=ASSMB;HOMSEQ=ACAGA;MAPQ=60;MATEID=718064:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_14_106771001_106796001_94C;SPAN=47299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:25:9.9:108.9,9.9,0:36:0:-108.9:108.9
15	17009488	718140:1	A	]15:17481101]A	26	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=718140:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17009488(-)-15:17481101(+)__15_17003001_17028001D;SPAN=471613;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:35:26.6:26.6,0,59.6:0:11:-26.47:27.25
15	17090500	718529:1	T	]15:17093747]T	99	PASS	DISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=60;MATEID=718529:2;MATENM=10;NM=1;NUMPARTS=2;SCTG=c_15_17076501_17101501_143C;SPAN=3247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:79:33:21.9:240.9,21.9,0:64:15:-241:241
15	17090542	718583:1	T	]15:17103384]T	21	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=718583:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17090542(-)-15:17103384(+)__15_17101001_17126001D;SPAN=12842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34
15	17093747	718540:1	A	A[15:17163323[	99	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=32;MATEID=718540:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_17076501_17101501_72C;SPAN=69576;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:67:14:18.6:204.6,18.6,0:59:8:-204.7:204.7
15	17093747	718529:2	A	A[15:17090500[	99	PASS	DISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=30;MATEID=718529:1;MATENM=1;NM=10;NUMPARTS=2;SCTG=c_15_17076501_17101501_143C;SPAN=3247;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:79:33:21.9:240.9,21.9,0:64:15:-241:241
15	17103384	718583:2	C	C[15:17090542[	21	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=718583:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17090542(-)-15:17103384(+)__15_17101001_17126001D;SPAN=12842;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34
15	17103407	718596:1	A	A[15:17163364[	18	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=718596:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103407(+)-15:17163364(-)__15_17101001_17126001D;SPAN=59957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:0:8:-18.82:19.57
15	17103493	718685:1	T	T[15:17494314[	49	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=718685:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103493(+)-15:17494314(-)__15_17493001_17518001D;SPAN=390821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:9:4.5:49.5,4.5,0:0:17:-49.51:49.51
15	17163323	718540:2	T	]15:17093747]T	99	PASS	DISC_MAPQ=14;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=54;MATEID=718540:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_17076501_17101501_72C;SPAN=69576;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:67:14:18.6:204.6,18.6,0:59:8:-204.7:204.7
15	17163364	718596:2	A	]15:17103407]A	18	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=718596:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103407(+)-15:17163364(-)__15_17101001_17126001D;SPAN=59957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:27:18.8:18.8,0,48.5:0:8:-18.82:19.57
15	17481101	718140:2	T	T[15:17009488[	26	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=718140:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17009488(-)-15:17481101(+)__15_17003001_17028001D;SPAN=471613;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:35:26.6:26.6,0,59.6:0:11:-26.47:27.25
15	17494314	718685:2	G	]15:17103493]G	49	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=718685:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103493(+)-15:17494314(-)__15_17493001_17518001D;SPAN=390821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:9:4.5:49.5,4.5,0:0:17:-49.51:49.51
15	18358071	718981:1	T	]15:19563836]T	0	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=718981:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:18358071(-)-15:19563836(+)__15_19551001_19576001D;SPAN=1205765;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:214:16.9:0,16.9,571:0:13:17.24:22.07
15	19563836	718981:2	A	A[15:18358071[	0	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=718981:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:18358071(-)-15:19563836(+)__15_19551001_19576001D;SPAN=1205765;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:13:214:16.9:0,16.9,571:0:13:17.24:22.07
15	20340255	719837:1	G	]15:20342236]G	15	PASS	EVDNC=ASSMB;HOMSEQ=GCCAAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCAGC;MAPQ=60;MATEID=719837:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_15_20335001_20360001_235C;SPAN=1981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:181:15.1:15.1,0,440.9:20:0:-15.14:39.36
15	20340976	719853:1	G	]15:20342557]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGCCAAGCCAGCC;MAPQ=60;MATEID=719853:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_15_20335001_20360001_516C;SPAN=1581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:10:293:49.1:0,49.1,835.1:10:0:49.35:14.43
15	20342236	719837:2	C	C[15:20340255[	15	PASS	EVDNC=ASSMB;HOMSEQ=GCCAAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCAGC;MAPQ=60;MATEID=719837:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_15_20335001_20360001_235C;SPAN=1981;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:181:15.1:15.1,0,440.9:20:0:-15.14:39.36
15	20342557	719853:2	C	C[15:20340976[	0	PASS	EVDNC=ASSMB;HOMSEQ=GCCAGCCAAGCCAGCC;MAPQ=60;MATEID=719853:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_15_20335001_20360001_516C;SPAN=1581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:10:293:49.1:0,49.1,835.1:10:0:49.35:14.43
15	20376251	719952:1	G	G[15:20384361[	83	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AATACTATGCAGCCATAAGAAAGGATGAGTTCATGTCCTTTG;MAPQ=58;MATEID=719952:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_20359501_20384501_234C;SPAN=8110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:89:83.9:83.9,0,140:19:15:-83.92:84.69
15	20384361	719952:2	A	]15:20376251]A	83	PASS	DISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=AATACTATGCAGCCATAAGAAAGGATGAGTTCATGTCCTTTG;MAPQ=41;MATEID=719952:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_20359501_20384501_234C;SPAN=8110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:89:83.9:83.9,0,140:19:15:-83.92:84.69
15	23961921	721360:1	C	C[15:23962220[	39	PASS	EVDNC=ASSMB;HOMSEQ=AAAATTACTCC;MAPQ=60;MATEID=721360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_23961001_23986001_113C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
15	23962220	721360:2	A	]15:23961921]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AAAATTACTCC;MAPQ=60;MATEID=721360:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_23961001_23986001_113C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28
15	25686249	722044:1	G	G[15:25687234[	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=722044:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_25676001_25701001_104C;SPAN=985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:8:10:-35.33:35.33
15	25687234	722044:2	G	]15:25686249]G	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=722044:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_25676001_25701001_104C;SPAN=985;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:27:32:35.3,0,32:8:10:-35.33:35.33
15	29700693	723297:2	A	[9:117377297[A	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=723297:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_29694001_29719001_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:6:8:-39.61:39.61
15	30173126	723413:2	G	]1:202625106]G	31	PASS	DISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=GTGTGTGG;INSERTION=TGTTGTGTGTGGCCTGTAATAGG;MAPQ=60;MATEID=723413:1;MATENM=1;NM=0;NUMPARTS=3;REPSEQ=GTGTGTGT;SCTG=c_15_30159501_30184501_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:33:11:31,0,11:10:10:-31.29:31.29
15	31950557	723963:1	T	]15:31956568]T	26	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=723963:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_15_31948001_31973001_63C;SPAN=6011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
15	31956568	723963:2	G	G[15:31950557[	26	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=723963:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_15_31948001_31973001_63C;SPAN=6011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
15	31999032	723972:1	T	T[15:31999326[	42	PASS	EVDNC=ASSMB;HOMSEQ=CAGCTCGTGGTTTTT;MAPQ=60;MATEID=723972:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_31997001_32022001_54C;SPAN=294;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
15	31999326	723972:2	C	]15:31999032]C	42	PASS	EVDNC=ASSMB;HOMSEQ=CAGCTCGTGGTTTTT;MAPQ=60;MATEID=723972:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_31997001_32022001_54C;SPAN=294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71
15	34449542	724964:1	A	A[15:34449833[	23	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTGGAAGCTA;MAPQ=60;MATEID=724964:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_34447001_34472001_8C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:5:4:-23.11:23.11
15	34449833	724964:2	A	]15:34449542]A	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTGGAAGCTA;MAPQ=60;MATEID=724964:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_34447001_34472001_8C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:5:4:-23.11:23.11
15	34716832	725053:1	T	T[15:34717151[	52	PASS	EVDNC=ASSMB;HOMSEQ=CCAAGCAGTGGCTTTCT;MAPQ=60;MATEID=725053:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_34716501_34741501_34C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:24:6.5:52.7,0,6.5:18:0:-54.59:54.59
15	34717151	725053:2	C	]15:34716832]C	52	PASS	EVDNC=ASSMB;HOMSEQ=CCAAGCAGTGGCTTTCT;MAPQ=60;MATEID=725053:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_34716501_34741501_34C;SPAN=319;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:24:6.5:52.7,0,6.5:18:0:-54.59:54.59
15	38974815	726371:1	T	T[15:38975158[	72	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATTTATT;MAPQ=60;MATEID=726371:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_15_38955001_38980001_114C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:23:6.6:72.6,6.6,0:24:0:-72.62:72.62
15	38975158	726371:2	G	]15:38974815]G	72	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAATTTATT;MAPQ=60;MATEID=726371:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_15_38955001_38980001_114C;SPAN=343;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:23:6.6:72.6,6.6,0:24:0:-72.62:72.62
15	39080194	726424:1	A	A[15:39081260[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=726424:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_15_39077501_39102501_79C;SPAN=1066;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:7:7:-39.61:39.61
15	39081260	726424:2	T	]15:39080194]T	39	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=TTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=726424:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_15_39077501_39102501_79C;SPAN=1066;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:7:7:-39.61:39.61
15	39452190	726529:1	A	A[15:39452659[	89	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=726529:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_39445001_39470001_11C;SPAN=469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:28:8.1:89.1,8.1,0:29:0:-89.12:89.12
15	39452659	726529:2	A	]15:39452190]A	89	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=726529:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_39445001_39470001_11C;SPAN=469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:28:8.1:89.1,8.1,0:29:0:-89.12:89.12
15	39702424	629585:2	A	]12:56596312]A	85	PASS	EVDNC=ASSMB;INSERTION=AGCTAGGTGGATTTTCTCTTC;MAPQ=60;MATEID=629585:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_56595001_56620001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82
15	40561981	726817:2	T	[7:26201745[T	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=726817:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_40547501_40572501_61C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:8:2:-24.37:24.37
15	40561991	384129:2	T	T]7:26213338]	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATATTTTTTTTTTAAAGAAATATAT;MAPQ=60;MATEID=384129:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_26190501_26215501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:44:30.5:30.5,0,80:11:5:-30.55:31.78
15	43844862	727594:1	A	A[15:43846655[	46	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=727594:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_43830501_43855501_14C;SPAN=1793;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
15	43846655	727594:2	G	]15:43844862]G	46	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=727594:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_43830501_43855501_14C;SPAN=1793;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19
15	44932069	727843:1	C	C[15:44943043[	56	PASS	DISC_MAPQ=50;EVDNC=ASDIS;MAPQ=60;MATEID=727843:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_44933001_44958001_10C;SPAN=10974;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11
15	44943043	727843:2	G	]15:44932069]G	56	PASS	DISC_MAPQ=5;EVDNC=ASDIS;MAPQ=18;MATEID=727843:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_44933001_44958001_10C;SPAN=10974;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11
15	45775782	728113:1	T	T[15:45776117[	56	PASS	EVDNC=ASSMB;HOMSEQ=CAGTACTCAGATTTCT;MAPQ=60;MATEID=728113:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_45766001_45791001_17C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:59:56:56,0,92.3:22:0:-56.04:56.53
15	45776117	728113:2	C	]15:45775782]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CAGTACTCAGATTTCT;MAPQ=60;MATEID=728113:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_45766001_45791001_17C;SPAN=335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:59:56:56,0,92.3:22:0:-56.04:56.53
15	46568509	728314:1	C	C[15:46568971[	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=728314:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_46550001_46575001_131C;SPAN=462;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31
15	46568971	728314:2	G	]15:46568509]G	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=728314:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_46550001_46575001_131C;SPAN=462;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31
15	48258079	728721:1	C	C[15:48258385[	66	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGTGACCTTTAC;MAPQ=60;MATEID=728721:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_48240501_48265501_24C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:22:0:-66.02:66.02
15	48258385	728721:2	A	]15:48258079]A	66	PASS	EVDNC=ASSMB;HOMSEQ=AAGAGTGACCTTTAC;MAPQ=60;MATEID=728721:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_48240501_48265501_24C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:22:0:-66.02:66.02
15	51039721	729920:1	A	]15:51222553]A	39	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGCC;MAPQ=60;MATEID=729920:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_51205001_51230001_0C;SPAN=182832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:48:39.5:39.5,0,79.1:13:10:-39.32:40.13
15	51060779	729897:1	T	]15:51135960]T	14	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=729897:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_51131501_51156501_26C;SPAN=75181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:53:14.9:14.9,0,117.2:9:0:-14.81:19.52
15	51135960	729897:2	T	T[15:51060779[	14	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=729897:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_51131501_51156501_26C;SPAN=75181;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:53:14.9:14.9,0,117.2:9:0:-14.81:19.52
15	51222553	729920:2	C	C[15:51039721[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGCC;MAPQ=60;MATEID=729920:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_51205001_51230001_0C;SPAN=182832;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:48:39.5:39.5,0,79.1:13:10:-39.32:40.13
15	53117362	730799:2	T	T]10:3040693]	42	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=730799:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:3040693(+)-15:53117362(+)__15_53116001_53141001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:2:3.9:42.9,3.9,0:0:14:-42.91:42.91
15	54266895	731383:1	A	A]15:54267497]	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731383:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54266895(+)-15:54267497(+)__15_54243001_54268001D;SPAN=602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:59:32.9:32.9,0,115.4:0:15:-32.93:35.51
15	54267497	731383:2	C	C]15:54266895]	32	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731383:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54266895(+)-15:54267497(+)__15_54243001_54268001D;SPAN=602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:59:32.9:32.9,0,115.4:0:15:-32.93:35.51
15	54926147	731620:1	C	C[15:54932265[	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731620:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54926147(+)-15:54932265(-)__15_54904501_54929501D;SPAN=6118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
15	54932265	731620:2	C	]15:54926147]C	59	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=731620:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54926147(+)-15:54932265(-)__15_54904501_54929501D;SPAN=6118;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
15	55137708	731713:1	T	T[15:55138016[	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGAACTTGCTTTA;MAPQ=60;MATEID=731713:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_55125001_55150001_39C;SPAN=308;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:76:17:21:231,21,0:58:23:-231.1:231.1
15	55138016	731713:2	T	]15:55137708]T	99	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAGAACTTGCTTTA;MAPQ=60;MATEID=731713:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_55125001_55150001_39C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:76:17:21:231,21,0:58:23:-231.1:231.1
15	55307268	731907:1	T	]15:55519627]T	14	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=731907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55517001_55542001_38C;SPAN=212359;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27
15	55363401	731803:1	A	A[15:55364830[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=731803:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:55363401(+)-15:55364830(-)__15_55345501_55370501D;SPAN=1429;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:17:12.6:138.6,12.6,0:0:45:-138.6:138.6
15	55364830	731803:2	A	]15:55363401]A	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=731803:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:55363401(+)-15:55364830(-)__15_55345501_55370501D;SPAN=1429;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:17:12.6:138.6,12.6,0:0:45:-138.6:138.6
15	55519627	731907:2	T	T[15:55307268[	14	PASS	EVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=731907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55517001_55542001_38C;SPAN=212359;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27
15	55959268	732153:2	T	]6:9347213]T	10	PASS	EVDNC=ASSMB;HOMSEQ=TTAG;MAPQ=60;MATEID=732153:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55958001_55983001_95C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:44:10.7:10.7,0,99.8:7:0:-10.74:14.97
15	56758841	732595:1	T	T[15:57242173[	19	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=732595:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_57232001_57257001_7C;SPAN=483332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07
15	56767901	763324:1	A	A[16:35481713[	29	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=763324:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_35476001_35501001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
15	57242173	732595:2	G	]15:56758841]G	19	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=732595:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_57232001_57257001_7C;SPAN=483332;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07
15	58484217	732918:1	T	]15:58485484]T	24	PASS	EVDNC=ASSMB;HOMSEQ=TCA;MAPQ=60;MATEID=732918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_58481501_58506501_52C;SPAN=1267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
15	58485484	732918:2	A	A[15:58484217[	24	PASS	EVDNC=ASSMB;HOMSEQ=TCA;MAPQ=60;MATEID=732918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_58481501_58506501_52C;SPAN=1267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
15	62413896	734250:1	T	T[15:62415594[	33	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=734250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62401501_62426501_7C;SPAN=1698;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92
15	62415594	734250:2	A	]15:62413896]A	33	PASS	EVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=734250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62401501_62426501_7C;SPAN=1698;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92
15	62731836	734367:2	G	[8:43588080[G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=734367:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62720001_62745001_57C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:11:8:-50.34:50.34
15	63304215	734738:1	C	]15:63530798]C	15	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=734738:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_63528501_63553501_77C;SPAN=226583;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:27:15.5:15.5,0,51.8:7:0:-15.52:16.64
15	63530798	734738:2	A	A[15:63304215[	15	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=734738:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_63528501_63553501_77C;SPAN=226583;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:27:15.5:15.5,0,51.8:7:0:-15.52:16.64
15	66585336	735943:1	C	C[15:66586077[	85	PASS	EVDNC=ASSMB;HOMSEQ=TAGCTGGGATTACAGGCATGTGCCACC;MAPQ=60;MATEID=735943:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_15_66566501_66591501_5C;SPAN=741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:15:7.8:85.8,7.8,0:28:0:-85.82:85.82
15	66586077	735943:2	T	]15:66585336]T	85	PASS	EVDNC=ASSMB;HOMSEQ=TAGCTGGGATTACAGGCATGTGCCACC;MAPQ=60;MATEID=735943:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_15_66566501_66591501_5C;SPAN=741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:15:7.8:85.8,7.8,0:28:0:-85.82:85.82
15	66791433	736010:1	A	A[15:66791732[	29	PASS	EVDNC=ASSMB;INSERTION=TCCA;MAPQ=60;MATEID=736010:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_66787001_66812001_57C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92
15	66791732	736010:2	T	]15:66791433]T	29	PASS	EVDNC=ASSMB;INSERTION=TCCA;MAPQ=60;MATEID=736010:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_66787001_66812001_57C;SPAN=299;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92
15	67112365	736108:1	T	T[15:67113267[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGATGAGGTTTCACCGTGTT;MAPQ=60;MATEID=736108:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_67105501_67130501_22C;SPAN=902;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:4:5:-21.63:21.63
15	67113267	736108:2	T	]15:67112365]T	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGATGAGGTTTCACCGTGTT;MAPQ=60;MATEID=736108:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_67105501_67130501_22C;SPAN=902;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:4:5:-21.63:21.63
15	68133682	736498:1	A	A[15:68136590[	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGAAATTTAGATTTTTA;MAPQ=60;MATEID=736498:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_15_68134501_68159501_0C;SPAN=2908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:13:12.6:138.6,12.6,0:46:0:-138.6:138.6
15	68136590	736498:2	C	]15:68133682]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGAAATTTAGATTTTTA;MAPQ=60;MATEID=736498:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_15_68134501_68159501_0C;SPAN=2908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:46:13:12.6:138.6,12.6,0:46:0:-138.6:138.6
15	70547227	737285:2	G	]6:122850286]G	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=737285:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_70535501_70560501_58C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:22:13.8:151.8,13.8,0:38:23:-151.8:151.8
15	70729514	737352:1	A	A[15:70735170[	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAGATGGGAACAA;MAPQ=60;MATEID=737352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_70731501_70756501_0C;SPAN=5656;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41
15	70735170	737352:2	A	]15:70729514]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AAAGATGGGAACAA;MAPQ=60;MATEID=737352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_70731501_70756501_0C;SPAN=5656;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41
15	71199706	737458:1	G	]15:71199923]G	14	PASS	EVDNC=ASSMB;HOMSEQ=GGGTGTGTG;MAPQ=60;MATEID=737458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_71197001_71222001_79C;SPAN=217;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:43:14.3:14.3,0,93.5:8:0:-14.32:17.71
15	71199923	737458:2	G	G[15:71199706[	14	PASS	EVDNC=ASSMB;HOMSEQ=GGGTGTGTG;MAPQ=60;MATEID=737458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_71197001_71222001_79C;SPAN=217;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:43:14.3:14.3,0,93.5:8:0:-14.32:17.71
15	71364652	737504:1	A	A[15:71371197[	20	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=737504:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_71368501_71393501_2C;SPAN=6545;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
15	71371197	737504:2	A	]15:71364652]A	20	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=737504:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_71368501_71393501_2C;SPAN=6545;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
15	71416270	737524:1	A	A[15:71421352[	35	PASS	EVDNC=ASSMB;INSERTION=ACC;MAPQ=60;MATEID=737524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71417501_71442501_20C;SPAN=5082;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
15	71421352	737524:2	C	]15:71416270]C	35	PASS	EVDNC=ASSMB;INSERTION=ACC;MAPQ=60;MATEID=737524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71417501_71442501_20C;SPAN=5082;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
15	71589230	737607:1	T	T[15:71590628[	69	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=737607:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71589001_71614001_84C;SPAN=1398;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:23:0:-69.32:69.32
15	71590628	737607:2	A	]15:71589230]A	69	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=737607:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71589001_71614001_84C;SPAN=1398;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:20:6.3:69.3,6.3,0:23:0:-69.32:69.32
15	71810648	737769:1	G	]15:72011907]G	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=737769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_72005501_72030501_35C;SPAN=201259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
15	72011907	737769:2	A	A[15:71810648[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=737769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_72005501_72030501_35C;SPAN=201259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58
15	72093702	737798:1	C	C[15:72095807[	95	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=737798:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:72093702(+)-15:72095807(-)__15_72079001_72104001D;SPAN=2105;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:5:8.7:95.7,8.7,0:0:32:-95.72:95.72
15	72095807	737798:2	T	]15:72093702]T	95	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=737798:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:72093702(+)-15:72095807(-)__15_72079001_72104001D;SPAN=2105;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:5:8.7:95.7,8.7,0:0:32:-95.72:95.72
15	73871864	738311:1	A	A[15:73872047[	25	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=738311:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_73867501_73892501_12C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06
15	73872047	738311:2	A	]15:73871864]A	25	PASS	EVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=738311:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_73867501_73892501_12C;SPAN=183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06
15	75332393	739347:1	T	T]15:77948129]	79	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=739347:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:75332393(+)-15:77948129(+)__15_77934501_77959501D;SPAN=2615736;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
15	76592256	739029:1	T	T[15:76604598[	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=739029:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_15_76587001_76612001_9C;SPAN=12342;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8
15	76604598	739029:2	T	]15:76592256]T	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=739029:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_15_76587001_76612001_9C;SPAN=12342;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8
15	76800145	739080:2	A	]1:35259113]A	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=739080:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_76783001_76808001_25C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:29:9:-92.42:92.42
15	77716143	739264:1	T	T[15:77720242[	24	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=739264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_77714001_77739001_61C;SPAN=4099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74
15	77720242	739264:2	T	]15:77716143]T	24	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=739264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_77714001_77739001_61C;SPAN=4099;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74
15	77948129	739347:2	T	T]15:75332393]	79	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=739347:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:75332393(+)-15:77948129(+)__15_77934501_77959501D;SPAN=2615736;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22
15	77948962	739680:1	C	[15:78747005[C	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=739680:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:77948962(-)-15:78747005(-)__15_78743001_78768001D;SPAN=798043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
15	78058385	739396:1	C	C[15:78058657[	23	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=739396:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_78057001_78082001_13C;SPAN=272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
15	78058657	739396:2	C	]15:78058385]C	23	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=739396:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_78057001_78082001_13C;SPAN=272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
15	78747005	739680:2	C	[15:77948962[C	42	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=739680:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:77948962(-)-15:78747005(-)__15_78743001_78768001D;SPAN=798043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91
15	79973158	740168:1	C	C]15:79973750]	11	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=740168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:79973158(+)-15:79973750(+)__15_79968001_79993001D;SPAN=592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:52:11.9:11.9,0,117.5:0:8:-11.79:16.98
15	79973404	740170:1	T	T[15:79973712[	31	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AA;INSERTION=TTGAATCTACCACAGCTTTGCACTGAGGCCACACATCCTACAGGCTGTTCCCAGCC;MAPQ=60;MATEID=740170:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_79968001_79993001_3C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1
15	79973712	740170:2	A	]15:79973404]A	31	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AA;INSERTION=TTGAATCTACCACAGCTTTGCACTGAGGCCACACATCCTACAGGCTGTTCCCAGCC;MAPQ=60;MATEID=740170:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_79968001_79993001_3C;SPAN=308;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1
15	79973750	740168:2	C	C]15:79973158]	11	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=740168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:79973158(+)-15:79973750(+)__15_79968001_79993001D;SPAN=592;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:52:11.9:11.9,0,117.5:0:8:-11.79:16.98
15	82882879	741083:1	T	T[15:82888919[	26	PASS	EVDNC=ASSMB;HOMSEQ=CACCAGCCACT;MAPQ=60;MATEID=741083:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_82883501_82908501_8C;SPAN=6040;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:10:0:-26.55:26.57
15	82888919	741083:2	C	]15:82882879]C	26	PASS	EVDNC=ASSMB;HOMSEQ=CACCAGCCACT;MAPQ=60;MATEID=741083:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_82883501_82908501_8C;SPAN=6040;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:10:0:-26.55:26.57
15	83105131	741171:1	G	G[15:83105451[	12	PASS	EVDNC=ASSMB;HOMSEQ=AGAGAAACTG;MAPQ=60;MATEID=741171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_83104001_83129001_4C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
15	83105451	741171:2	A	]15:83105131]A	12	PASS	EVDNC=ASSMB;HOMSEQ=AGAGAAACTG;MAPQ=60;MATEID=741171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_83104001_83129001_4C;SPAN=320;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
15	83872801	741369:1	T	T[15:83875096[	92	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=741369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:83872801(+)-15:83875096(-)__15_83863501_83888501D;SPAN=2295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:19:8.4:92.4,8.4,0:0:31:-92.42:92.42
15	83875096	741369:2	T	]15:83872801]T	92	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:83872801(+)-15:83875096(-)__15_83863501_83888501D;SPAN=2295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:19:8.4:92.4,8.4,0:0:31:-92.42:92.42
15	84635421	741774:1	A	]15:84984456]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=741774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_84966001_84991001_39C;SPAN=349035;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
15	84984456	741774:2	T	T[15:84635421[	27	PASS	EVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=741774:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_84966001_84991001_39C;SPAN=349035;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
15	85009452	741814:1	T	]15:85130254]T	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741814:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:85009452(-)-15:85130254(+)__15_85113001_85138001D;SPAN=120802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81
15	85130254	741814:2	A	A[15:85009452[	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741814:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:85009452(-)-15:85130254(+)__15_85113001_85138001D;SPAN=120802;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81
15	86013468	742255:2	T	T[6:163482678[	23	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=742255:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:163482678(-)-15:86013468(+)__15_85995001_86020001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74
15	86850836	742646:1	A	]15:87105091]A	30	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=742646:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_87097501_87122501_6C;SPAN=254255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
15	87105091	742646:2	A	A[15:86850836[	30	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=742646:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_87097501_87122501_6C;SPAN=254255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47
15	99031325	747000:1	C	C[15:99032380[	99	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGATTACAGGC;MAPQ=60;MATEID=747000:2;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_15_99029001_99054001_21C;SPAN=1055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:7:15:165,15,0:23:38:-165:165
15	99032380	747000:2	C	]15:99031325]C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGATTACAGGC;MAPQ=60;MATEID=747000:1;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_15_99029001_99054001_21C;SPAN=1055;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:54:7:15:165,15,0:23:38:-165:165
15	100146718	747303:1	G	]15:100152928]G	22	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=747303:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146718(-)-15:100152928(+)__15_100131501_100156501D;SPAN=6210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:0:10:-22.05:23.72
15	100146883	747304:1	A	A[15:100153135[	50	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=747304:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146883(+)-15:100153135(-)__15_100131501_100156501D;SPAN=6252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33
15	100152928	747303:2	G	G[15:100146718[	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=747303:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146718(-)-15:100152928(+)__15_100131501_100156501D;SPAN=6210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:0:10:-22.05:23.72
15	100153135	747304:2	A	]15:100146883]A	50	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=747304:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146883(+)-15:100153135(-)__15_100131501_100156501D;SPAN=6252;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33
15	100442708	747741:1	C	]15:101075010]C	29	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=747741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100442708(-)-15:101075010(+)__15_101062501_101087501D;SPAN=632302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
15	101075010	747741:2	G	G[15:100442708[	29	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=747741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100442708(-)-15:101075010(+)__15_101062501_101087501D;SPAN=632302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35
16	458618	748395:1	T	]16:459067]T	0	PASS	EVDNC=ASSMB;HOMSEQ=TCATC;MAPQ=60;MATEID=748395:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_96C;SPAN=449;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:63:0.9:0,0.9,158.4:5:0:1.204:9.086
16	458641	748396:1	G	[16:563288[G	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=748396:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_49C;SPAN=104647;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:8:7:-33.64:33.8
16	459067	748395:2	C	C[16:458618[	0	PASS	EVDNC=ASSMB;HOMSEQ=TCATC;MAPQ=60;MATEID=748395:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_441001_466001_96C;SPAN=449;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:63:0.9:0,0.9,158.4:5:0:1.204:9.086
16	480785	748407:1	A	A[16:481069[	20	PASS	EVDNC=ASSMB;HOMSEQ=AAAGTGCTGGGATTACAGGCGTGAGCCA;MAPQ=60;MATEID=748407:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_465501_490501_143C;SPAN=284;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
16	481069	748407:2	A	]16:480785]A	20	PASS	EVDNC=ASSMB;HOMSEQ=AAAGTGCTGGGATTACAGGCGTGAGCCA;MAPQ=60;MATEID=748407:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_465501_490501_143C;SPAN=284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
16	563288	748396:2	G	[16:458641[G	33	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=748396:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_49C;SPAN=104647;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:33:33.8:33.8,0,47:8:7:-33.64:33.8
16	909933	748564:2	G	G[9:119887340[	32	PASS	EVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=748564:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_906501_931501_32C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59
16	1372911	748770:1	C	C[16:1374091[	46	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=748770:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:1372911(+)-16:1374091(-)__16_1372001_1397001D;SPAN=1180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21
16	1374091	748770:2	A	]16:1372911]A	46	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=748770:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:1372911(+)-16:1374091(-)__16_1372001_1397001D;SPAN=1180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21
16	1795954	748893:1	A	A[16:1796104[	5	PASS	EVDNC=ASSMB;HOMSEQ=CTGCCTCAGCCTCCCAAGTAGCTGGGATTA;MAPQ=60;MATEID=748893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_1788501_1813501_49C;SPAN=150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
16	1796104	748893:2	C	]16:1795954]C	5	PASS	EVDNC=ASSMB;HOMSEQ=CTGCCTCAGCCTCCCAAGTAGCTGGGATTA;MAPQ=60;MATEID=748893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_1788501_1813501_49C;SPAN=150;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
16	4306246	749770:1	T	]16:4449304]T	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGGTC;MAPQ=60;MATEID=749770:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_4434501_4459501_108C;SPAN=143058;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:5:5:-21.07:21.11
16	4449304	749770:2	C	C[16:4306246[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGGTC;MAPQ=10;MATEID=749770:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_4434501_4459501_108C;SPAN=143058;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:5:5:-21.07:21.11
16	4622158	749870:1	T	T[16:4622413[	69	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CTCAGCTTCCCGAGTAGCTGGGATTACAGGCACATGCCACCACACCCAGCTAATTTTT;MAPQ=60;MATEID=749870:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_16_4606001_4631001_94C;SPAN=255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:11:6.3:69.3,6.3,0:12:12:-69.32:69.32
16	4622413	749870:2	C	]16:4622158]C	69	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCAGCTTCCCGAGTAGCTGGGATTACAGGCACATGCCACCACACCCAGCTAATTTTT;MAPQ=60;MATEID=749870:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_16_4606001_4631001_94C;SPAN=255;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:11:6.3:69.3,6.3,0:12:12:-69.32:69.32
16	6221570	750485:1	A	A]17:53112039]	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=750485:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:6221570(+)-17:53112039(+)__16_6198501_6223501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29
16	6222194	807773:1	A	[17:53111341[A	55	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=807773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_53091501_53116501_47C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:26:9.2:55.4,0,9.2:14:8:-57.2:57.2
16	6331609	750547:1	T	]16:6340893]T	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=750547:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_6321001_6346001_6C;SPAN=9284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:7:8:-19.31:21.11
16	6340893	750547:2	C	C[16:6331609[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=750547:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_6321001_6346001_6C;SPAN=9284;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:7:8:-19.31:21.11
16	9394638	752239:1	T	]16:9394746]T	11	PASS	EVDNC=ASSMB;HOMSEQ=TCCCTCCCTTCCTCTCTCCCTCCCTTCCT;MAPQ=60;MATEID=752239:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_16_9383501_9408501_108C;SPAN=108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:6:1.7:11.6,0,1.7:4:0:-11.75:11.75
16	9394746	752239:2	T	T[16:9394638[	11	PASS	EVDNC=ASSMB;HOMSEQ=TCCCTCCCTTCCTCTCTCCCTCCCTTCCT;MAPQ=60;MATEID=752239:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_16_9383501_9408501_108C;SPAN=108;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:6:1.7:11.6,0,1.7:4:0:-11.75:11.75
16	10676991	752774:1	C	]16:10677742]C	48	PASS	EVDNC=ASSMB;INSERTION=CCACC;MAPQ=60;MATEID=752774:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_10657501_10682501_92C;SPAN=751;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:52:48.2:48.2,0,81.2:19:0:-48.1:48.61
16	10677215	752775:1	A	A[16:10677733[	86	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=752775:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_10657501_10682501_163C;SPAN=518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:55:50.6:86.9,0,50.6:31:0:-87.35:87.35
16	10677733	752775:2	G	]16:10677215]G	86	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=752775:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_10657501_10682501_163C;SPAN=518;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:55:50.6:86.9,0,50.6:31:0:-87.35:87.35
16	10677742	752774:2	A	A[16:10676991[	48	PASS	EVDNC=ASSMB;INSERTION=CCACC;MAPQ=60;MATEID=752774:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_10657501_10682501_92C;SPAN=751;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:52:48.2:48.2,0,81.2:19:0:-48.1:48.61
16	11589903	753150:1	T	T[16:11591439[	29	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CCTCCCAAAGTGCTGGGATTACAGGT;MAPQ=60;MATEID=753150:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_16_11588501_11613501_112C;SPAN=1536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:7:7:-29.21:29.92
16	11591439	753150:2	C	]16:11589903]C	29	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CCTCCCAAAGTGCTGGGATTACAGGT;MAPQ=60;MATEID=753150:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_16_11588501_11613501_112C;SPAN=1536;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:37:29.3:29.3,0,62.3:7:7:-29.21:29.92
16	11908479	753253:1	G	G[16:11908788[	95	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATACAAAAATTAG;MAPQ=60;MATEID=753253:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_11907001_11932001_46C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94
16	11908788	753253:2	A	]16:11908479]A	95	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATACAAAAATTAG;MAPQ=60;MATEID=753253:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_11907001_11932001_46C;SPAN=309;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94
16	14359379	754285:1	T	T[16:14359797[	12	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=754285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_14357001_14382001_46C;SPAN=418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
16	14359797	754285:2	T	]16:14359379]T	12	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=754285:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_14357001_14382001_46C;SPAN=418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46
16	16840521	755143:1	T	T[16:16846558[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGCTTAATTCTTTT;MAPQ=60;MATEID=755143:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_16831501_16856501_85C;SPAN=6037;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6
16	16846558	755143:2	A	]16:16840521]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAGCTTAATTCTTTT;MAPQ=60;MATEID=755143:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_16831501_16856501_85C;SPAN=6037;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6
16	18821324	755721:1	T	T[16:18827054[	72	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=755721:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18821324(+)-16:18827054(-)__16_18816001_18841001D;SPAN=5730;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62
16	18827054	755721:2	G	]16:18821324]G	72	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=755721:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18821324(+)-16:18827054(-)__16_18816001_18841001D;SPAN=5730;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62
16	18866485	755809:1	G	]16:18999859]G	33	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=755809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18866485(-)-16:18999859(+)__16_18987501_19012501D;SPAN=133374;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:0:11:-33.01:33.01
16	18999859	755809:2	G	G[16:18866485[	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=755809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18866485(-)-16:18999859(+)__16_18987501_19012501D;SPAN=133374;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:0:11:-33.01:33.01
16	20595326	756368:1	C	C[16:20601487[	26	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=756368:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:20595326(+)-16:20601487(-)__16_20580001_20605001D;SPAN=6161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
16	20601487	756368:2	G	]16:20595326]G	26	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=756368:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:20595326(+)-16:20601487(-)__16_20580001_20605001D;SPAN=6161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
16	20767235	756419:1	G	G[16:20767540[	89	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAACAGGGACCGG;MAPQ=60;MATEID=756419:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_20751501_20776501_13C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12
16	20767540	756419:2	A	]16:20767235]A	89	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAACAGGGACCGG;MAPQ=60;MATEID=756419:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_20751501_20776501_13C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12
16	20885123	756455:1	C	]16:20923726]C	26	PASS	DISC_MAPQ=52;EVDNC=ASDIS;INSERTION=AAT;MAPQ=24;MATEID=756455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_20923001_20948001_19C;SPAN=38603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:5:7:-26.69:26.69
16	20923726	756455:2	C	C[16:20885123[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAT;MAPQ=60;MATEID=756455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_20923001_20948001_19C;SPAN=38603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:13:6.2:26,0,6.2:5:7:-26.69:26.69
16	23036574	757051:1	T	T[16:23038210[	99	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=757051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:23036574(+)-16:23038210(-)__16_23030001_23055001D;SPAN=1636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:58:11:16.2:178.2,16.2,0:0:58:-178.2:178.2
16	23038210	757051:2	G	]16:23036574]G	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=757051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:23036574(+)-16:23038210(-)__16_23030001_23055001D;SPAN=1636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:58:11:16.2:178.2,16.2,0:0:58:-178.2:178.2
16	23454885	757171:1	C	]16:23455660]C	18	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCAGGAGGCAGAGGCAGGAGAA;MAPQ=60;MATEID=757171:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_23446501_23471501_48C;SPAN=775;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:7:6:-18.18:20.65
16	23455660	757171:2	A	A[16:23454885[	18	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCAGGAGGCAGAGGCAGGAGAA;MAPQ=60;MATEID=757171:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_23446501_23471501_48C;SPAN=775;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:41:18.2:18.2,0,84.2:7:6:-18.18:20.65
16	23517232	757200:1	T	T[16:23517528[	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCAGCTAATTTTTTTCT;MAPQ=60;MATEID=757200:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_23495501_23520501_18C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:29:8.1:89.1,8.1,0:20:13:-89.12:89.12
16	23517528	757200:2	C	]16:23517232]C	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCAGCTAATTTTTTTCT;MAPQ=60;MATEID=757200:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_23495501_23520501_18C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:29:8.1:89.1,8.1,0:20:13:-89.12:89.12
16	23801697	757334:1	C	C[16:23801784[	12	PASS	EVDNC=ASSMB;HOMSEQ=CCCTTCCCTTCCCTTCCCTTC;MAPQ=60;MATEID=757334:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_23789501_23814501_0C;SPAN=87;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
16	23801784	757334:2	C	]16:23801697]C	12	PASS	EVDNC=ASSMB;HOMSEQ=CCCTTCCCTTCCCTTCCCTTC;MAPQ=60;MATEID=757334:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_23789501_23814501_0C;SPAN=87;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
16	24412394	813236:1	A	]17:68005944]A	49	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=813236:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:24412394(-)-17:68005944(+)__17_67987501_68012501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
16	25054926	757985:1	T	T[16:25126102[	25	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=757985:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25054926(+)-16:25126102(-)__16_25112501_25137501D;SPAN=71176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:0:10:-25.7:25.87
16	25055244	757986:1	G	]16:25126503]G	50	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=757986:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25055244(-)-16:25126503(+)__16_25112501_25137501D;SPAN=71259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77
16	25126102	757985:2	A	]16:25054926]A	25	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=757985:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25054926(+)-16:25126102(-)__16_25112501_25137501D;SPAN=71176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:26:25.7:25.7,0,38.9:0:10:-25.7:25.87
16	25126503	757986:2	T	T[16:25055244[	50	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=757986:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25055244(-)-16:25126503(+)__16_25112501_25137501D;SPAN=71259;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77
16	25328890	758100:1	A	A[16:25331806[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=758100:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25328890(+)-16:25331806(-)__16_25308501_25333501D;SPAN=2916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
16	25331806	758100:2	T	]16:25328890]T	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=758100:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25328890(+)-16:25331806(-)__16_25308501_25333501D;SPAN=2916;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
16	25806596	916305:1	T	]22:28669594]T	0	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=916305:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:116:0.5:0.5,0,290.9:10:0:-0.4034:18.55
16	25844053	887220:1	C	C[20:57997438[	16	PASS	EVDNC=ASSMB;INSERTION=ACTCCAGCAGTTATGTACTATATATATATAT;MAPQ=60;MATEID=887220:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57991501_58016501_94C;SPAN=-1;SUBN=8;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77
16	26374051	758532:1	T	]16:26375000]T	99	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TGGATGGATGGGTG;MAPQ=60;MATEID=758532:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_16_26362001_26387001_113C;SPAN=949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:55:7.7:129.8,0,7.7:12:36:-136.1:136.1
16	26375000	758532:2	G	G[16:26374051[	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGGATGGATGGGTG;MAPQ=37;MATEID=758532:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_16_26362001_26387001_113C;SPAN=949;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:55:7.7:129.8,0,7.7:12:36:-136.1:136.1
16	26596716	758591:1	T	T[16:26597045[	37	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTCTTCACATCTT;MAPQ=60;MATEID=758591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_26582501_26607501_31C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:7:8:-37.47:37.47
16	26597045	758591:2	C	]16:26596716]C	37	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTCTTCACATCTT;MAPQ=60;MATEID=758591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_26582501_26607501_31C;SPAN=329;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:21:14:37.1,0,14:7:8:-37.47:37.47
16	27941595	759035:1	C	[16:27942199[C	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CCCGGGAGGCAGAGGTTGCCGTGAGCCAAGATTGTGCCACTGCACTC;MAPQ=60;MATEID=759035:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_16_27930001_27955001_145C;SPAN=604;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:37:12.6:138.6,12.6,0:31:29:-138.6:138.6
16	27942199	759035:2	G	[16:27941595[G	99	PASS	DISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=CCCGGGAGGCAGAGGTTGCCGTGAGCCAAGATTGTGCCACTGCACTC;MAPQ=60;MATEID=759035:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_16_27930001_27955001_145C;SPAN=604;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:37:12.6:138.6,12.6,0:31:29:-138.6:138.6
16	29226840	759567:1	C	C]16:29227193]	23	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=759567:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:29226840(+)-16:29227193(+)__16_29204001_29229001D;SPAN=353;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:0:2.1:23.1,2.1,0:0:8:-23.11:23.11
16	29227193	759567:2	A	A]16:29226840]	23	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=759567:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:29226840(+)-16:29227193(+)__16_29204001_29229001D;SPAN=353;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:0:2.1:23.1,2.1,0:0:8:-23.11:23.11
16	31103571	760178:2	C	[2:3592332[C	25	PASS	DISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=CTCTCC;MAPQ=37;MATEID=760178:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_31090501_31115501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:8:2:-24.99:24.99
16	31371775	760282:2	G	]9:107182828]G	24	PASS	EVDNC=ASSMB;INSERTION=TATATACATTAAACAA;MAPQ=60;MATEID=760282:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_31360001_31385001_63C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37
16	34226949	762361:1	A	]16:34231988]A	85	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=762361:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:34226949(-)-16:34231988(+)__16_34226501_34251501D;SPAN=5039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:59:62.6:85.7,0,62.6:0:31:-85.93:85.93
16	34231988	762361:2	C	C[16:34226949[	85	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=762361:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:34226949(-)-16:34231988(+)__16_34226501_34251501D;SPAN=5039;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:59:62.6:85.7,0,62.6:0:31:-85.93:85.93
16	34277222	762434:1	A	A[16:36768349[	99	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCCTTGTGTTGTGTGTATTCA;MAPQ=31;MATEID=762434:2;MATENM=0;NM=12;NUMPARTS=2;SCTG=c_16_34275501_34300501_207C;SPAN=2491127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:36:11.1:122.1,11.1,0:33:10:-122.1:122.1
16	34647464	762802:1	A	]16:34750727]A	59	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=762802:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_34741001_34766001_84C;SPAN=103263;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34
16	34714098	762605:2	G	G]7:61065398]	82	PASS	DISC_MAPQ=5;EVDNC=ASDIS;INSERTION=CAAATAGACT;MAPQ=49;MATEID=762605:1;MATENM=7;NM=20;NUMPARTS=2;SCTG=c_16_34692001_34717001_199C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:35:3.5:82.7,0,3.5:21:10:-86.59:86.59
16	34715602	762653:1	T	T[16:36241058[	47	PASS	DISC_MAPQ=12;EVDNC=TSI_G;HOMSEQ=TGATGATTCCATTTGAGTCCATTCAATGGTGATTAAATTCGATTCCATTTGATGATTCCATTCAATTCCAT;INSERTION=TCCATTTGATGATTCCATTCAATTCCATACGATGATTCCATTCCATTCCTTTCAAAGATGAATT;MAPQ=28;MATEID=762653:2;MATENM=0;NM=10;NUMPARTS=3;SCTG=c_16_34692001_34717001_133C;SECONDARY;SPAN=1525456;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:17:4:-48.35:48.35
16	34750727	762802:2	T	T[16:34647464[	59	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=762802:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_34741001_34766001_84C;SPAN=103263;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34
16	34954400	97080:2	A	A]2:91409350]	99	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=2;MATEID=97080:1;MATENM=5;NM=2;NUMPARTS=2;SCTG=c_2_91385001_91410001_138C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:38:10.5:115.5,10.5,0:27:15:-115.5:115.5
16	35481713	763324:2	A	]15:56767901]A	29	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=763324:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_35476001_35501001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
16	36178073	395755:2	T	[7:58048127[T	19	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=395755:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58048127(-)-16:36178073(-)__7_58040501_58065501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
16	36241058	762653:2	C	]16:34715602]C	47	PASS	DISC_MAPQ=15;EVDNC=TSI_G;HOMSEQ=TGATGATTCCATTTGAGTCCATTCAATGGTGATTAAATTCGATTCCATTTGATGATTCCATTCAATTCCAT;INSERTION=TCCATTTGATGATTCCATTCAATTCCATACGATGATTCCATTCCATTCCTTTCAAAGATGAATT;MAPQ=38;MATEID=762653:1;MATENM=10;NM=0;NUMPARTS=3;SCTG=c_16_34692001_34717001_133C;SECONDARY;SPAN=1525456;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:29:24.8:47.9,0,24.8:17:4:-48.35:48.35
16	36315759	764049:1	A	A[16:36322173[	46	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=764049:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36315759(+)-16:36322173(-)__16_36309001_36334001D;SPAN=6414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:0:15:-47.02:47.02
16	36322173	764049:2	A	]16:36315759]A	46	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=764049:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36315759(+)-16:36322173(-)__16_36309001_36334001D;SPAN=6414;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:18:1.5:46.2,1.5,0:0:15:-47.02:47.02
16	36325746	764074:1	T	]16:38254796]T	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAAACTAGACAGAA;MAPQ=41;MATEID=764074:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_16_36309001_36334001_69C;SPAN=1929050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:63:0:17.4:191.4,17.4,0:63:0:-191.4:191.4
16	36326163	764132:1	T	T[16:36335907[	28	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=764132:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326163(+)-16:36335907(-)__16_36333501_36358501D;SPAN=9744;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
16	36326237	764133:1	T	T]16:36337448]	17	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=764133:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326237(+)-16:36337448(+)__16_36333501_36358501D;SPAN=11211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
16	36335907	764132:2	C	]16:36326163]C	28	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=764132:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326163(+)-16:36335907(-)__16_36333501_36358501D;SPAN=9744;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
16	36337448	764133:2	C	C]16:36326237]	17	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=764133:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326237(+)-16:36337448(+)__16_36333501_36358501D;SPAN=11211;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19
16	36342786	764455:1	T	T[16:38253962[	41	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36342786(+)-16:38253962(-)__16_38244501_38269501D;SPAN=1911176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:39:41.9:41.9,0,55.1:0:16:-41.85:41.97
16	36343245	764152:1	A	]16:36351031]A	26	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=764152:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36343245(-)-16:36351031(+)__16_36333501_36358501D;SPAN=7786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:0:12:-26.68:28.57
16	36348587	764356:1	T	T[16:37915278[	56	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764356:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36348587(+)-16:37915278(-)__16_37901501_37926501D;SPAN=1566691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:10:5.1:56.1,5.1,0:0:19:-56.11:56.11
16	36350693	764203:1	A	]16:36714722]A	99	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=764203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36350693(-)-16:36714722(+)__16_36701001_36726001D;SPAN=364029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
16	36351031	764152:2	A	A[16:36343245[	26	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=764152:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36343245(-)-16:36351031(+)__16_36333501_36358501D;SPAN=7786;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:0:12:-26.68:28.57
16	36353193	847883:1	A	A[19:27240874[	26	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=847883:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36353193(+)-19:27240874(-)__19_27219501_27244501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
16	36356275	764168:1	G	]16:36379416]G	46	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=764168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36356275(-)-16:36379416(+)__16_36358001_36383001D;SPAN=23141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
16	36379416	764168:2	A	A[16:36356275[	46	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=764168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36356275(-)-16:36379416(+)__16_36358001_36383001D;SPAN=23141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
16	36714399	764204:1	G	]16:36909413]G	79	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=764204:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36714399(-)-16:36909413(+)__16_36701001_36726001D;SPAN=195014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:8:7.2:79.2,7.2,0:0:26:-79.22:79.22
16	36714722	764203:2	A	A[16:36350693[	99	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=764203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36350693(-)-16:36714722(+)__16_36701001_36726001D;SPAN=364029;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
16	36747721	764207:1	A	]16:37962854]A	89	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=764207:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36747721(-)-16:37962854(+)__16_36725501_36750501D;SPAN=1215133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12
16	36768349	762434:2	C	]16:34277222]C	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCCTTGTGTTGTGTGTATTCA;MAPQ=55;MATEID=762434:1;MATENM=12;NM=0;NUMPARTS=2;SCTG=c_16_34275501_34300501_207C;SPAN=2491127;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:36:11.1:122.1,11.1,0:33:10:-122.1:122.1
16	36909413	764204:2	T	T[16:36714399[	79	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=764204:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36714399(-)-16:36909413(+)__16_36701001_36726001D;SPAN=195014;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:8:7.2:79.2,7.2,0:0:26:-79.22:79.22
16	37104034	764363:1	T	]16:37939320]T	59	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=764363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37104034(-)-16:37939320(+)__16_37926001_37951001D;SPAN=835286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41
16	37915278	764356:2	T	]16:36348587]T	56	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=764356:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36348587(+)-16:37915278(-)__16_37901501_37926501D;SPAN=1566691;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:10:5.1:56.1,5.1,0:0:19:-56.11:56.11
16	37938824	764402:1	T	]16:38166645]T	32	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=764402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37938824(-)-16:38166645(+)__16_38146501_38171501D;SPAN=227821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
16	37939320	764363:2	T	T[16:37104034[	59	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=764363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37104034(-)-16:37939320(+)__16_37926001_37951001D;SPAN=835286;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41
16	37962854	764207:2	A	A[16:36747721[	89	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=764207:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36747721(-)-16:37962854(+)__16_36725501_36750501D;SPAN=1215133;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12
16	38166645	764402:2	T	T[16:37938824[	32	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37938824(-)-16:38166645(+)__16_38146501_38171501D;SPAN=227821;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15
16	38253962	764455:2	C	]16:36342786]C	41	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=764455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36342786(+)-16:38253962(-)__16_38244501_38269501D;SPAN=1911176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:39:41.9:41.9,0,55.1:0:16:-41.85:41.97
16	38254796	764074:2	A	A[16:36325746[	99	PASS	EVDNC=ASSMB;HOMSEQ=TAAAAACTAGACAGAA;MAPQ=56;MATEID=764074:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_16_36309001_36334001_69C;SPAN=1929050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:63:0:17.4:191.4,17.4,0:63:0:-191.4:191.4
16	48247011	764887:1	G	]16:48247537]G	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48247011(-)-16:48247537(+)__16_48240501_48265501D;SPAN=526;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96
16	48247537	764887:2	T	T[16:48247011[	27	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=764887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48247011(-)-16:48247537(+)__16_48240501_48265501D;SPAN=526;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96
16	48871495	764957:1	A	A]16:48872234]	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764957:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871495(+)-16:48872234(+)__16_48853001_48878001D;SPAN=739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:0:15:-46.21:46.21
16	48871899	764958:1	G	[16:48872323[G	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764958:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871899(-)-16:48872323(-)__16_48853001_48878001D;SPAN=424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92
16	48872234	764957:2	T	T]16:48871495]	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764957:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871495(+)-16:48872234(+)__16_48853001_48878001D;SPAN=739;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:0:15:-46.21:46.21
16	48872323	764958:2	T	[16:48871899[T	75	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764958:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871899(-)-16:48872323(-)__16_48853001_48878001D;SPAN=424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92
16	55760663	766440:1	C	[16:55833056[C	21	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=766440:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:55760663(-)-16:55833056(-)__16_55811001_55836001D;SPAN=72393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
16	55833056	766440:2	C	[16:55760663[C	21	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=766440:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:55760663(-)-16:55833056(-)__16_55811001_55836001D;SPAN=72393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63
16	58613311	767109:1	C	C[16:58616361[	62	PASS	EVDNC=ASSMB;HOMSEQ=CTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=767109:2;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_16_58604001_58629001_1C;SPAN=3050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72
16	58616361	767109:2	C	]16:58613311]C	62	PASS	EVDNC=ASSMB;HOMSEQ=CTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=767109:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_16_58604001_58629001_1C;SPAN=3050;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72
16	61045452	692473:2	A	A]14:37300358]	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=692473:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:37300358(+)-16:61045452(+)__14_37289001_37314001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
16	61225881	767719:1	A	]16:61227731]A	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=767719:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_61225501_61250501_17C;SPAN=1850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3
16	61227731	767719:2	T	T[16:61225881[	34	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=767719:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_61225501_61250501_17C;SPAN=1850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3
16	61747718	767831:1	T	]16:61755731]T	35	PASS	EVDNC=ASSMB;INSERTION=ATTTCTAAAATTAAAATAACTGAATTT;MAPQ=60;MATEID=767831:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_61740001_61765001_3C;SPAN=8013;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:37:35.9:35.9,0,55.7:14:0:-35.81:36.09
16	61755731	767831:2	A	A[16:61747718[	35	PASS	EVDNC=ASSMB;INSERTION=ATTTCTAAAATTAAAATAACTGAATTT;MAPQ=60;MATEID=767831:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_61740001_61765001_3C;SPAN=8013;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:37:35.9:35.9,0,55.7:14:0:-35.81:36.09
16	63759379	768310:2	A	A[4:21714832[	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTTA;MAPQ=60;MATEID=768310:1;MATENM=0;NM=10;NUMPARTS=2;SCTG=c_16_63749001_63774001_22C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:16:5.7:62.7,5.7,0:19:2:-62.72:62.72
16	65129169	1010103:1	T	[Un_JTFH01001895v1_decoy:1[T	33	PASS	DISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATTTTATATATTGTATAAGAATATATA;INSERTION=TATGTAATATCTATTTTATACACTATACAAGAATATGTAATATCTAATTATTTTATATACTGTGTAAGAATATATAACATATAGTTATTTTATACATTGTATAAGAATATATAATATCTAGTTATTTTATACATTGTATAAGAATATATAATATCTAGTTATTTTATATATTGTATAAGAATATATAATATCTAGT;MAPQ=60;MATEID=1010103:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_2738_1_2599_7C;SECONDARY;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:4:3:33,3,0:11:0:-33.01:33.01
16	69033084	769342:1	G	]16:69161208]G	16	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=769342:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_69016501_69041501_7C;SPAN=128124;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:5:3:-16.36:17.07
16	69161208	769342:2	T	T[16:69033084[	16	PASS	DISC_MAPQ=43;EVDNC=ASDIS;MAPQ=60;MATEID=769342:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_69016501_69041501_7C;SPAN=128124;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:24:16.4:16.4,0,42.8:5:3:-16.36:17.07
16	69727926	769622:1	C	[16:69728993[C	99	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CTTGA;MAPQ=60;MATEID=769622:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69727001_69752001_46C;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:34:9.3:102.3,9.3,0:20:17:-102.3:102.3
16	69728344	769625:1	G	G]16:69729043]	85	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=769625:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:69728344(+)-16:69729043(+)__16_69727001_69752001D;SPAN=699;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:0:28:-85.82:85.82
16	69728993	769622:2	T	[16:69727926[T	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTTGA;MAPQ=60;MATEID=769622:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69727001_69752001_46C;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:34:9.3:102.3,9.3,0:20:17:-102.3:102.3
16	69729043	769625:2	A	A]16:69728344]	85	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=769625:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:69728344(+)-16:69729043(+)__16_69727001_69752001D;SPAN=699;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:26:7.8:85.8,7.8,0:0:28:-85.82:85.82
16	69820428	769676:1	G	G[16:69824903[	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=769676:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_82C;SPAN=4475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:8:2:-29.71:29.71
16	69820783	769677:1	A	]16:69825118]A	35	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAAAAGTGAACA;MAPQ=60;MATEID=769677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_98C;SPAN=4335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:6:9:-37.11:37.11
16	69824903	769676:2	T	]16:69820428]T	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=769676:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_82C;SPAN=4475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:8:2:-29.71:29.71
16	69825118	769677:2	A	A[16:69820783[	35	PASS	DISC_MAPQ=54;EVDNC=ASDIS;INSERTION=CAAAAGTGAACA;MAPQ=60;MATEID=769677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_98C;SPAN=4335;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:6:9:-37.11:37.11
16	70087940	769777:2	T	[2:31423208[T	99	PASS	DISC_MAPQ=31;EVDNC=ASDIS;MAPQ=60;MATEID=769777:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_70070001_70095001_81C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:14:9.6:105.6,9.6,0:26:21:-105.6:105.6
16	70519121	769901:1	T	T[16:70519427[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGATTTGCATTTCT;MAPQ=60;MATEID=769901:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_70511001_70536001_3C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:27:15.5:15.5,0,51.8:5:4:-15.52:16.64
16	70519427	769901:2	A	]16:70519121]A	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGATTTGCATTTCT;MAPQ=60;MATEID=769901:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_70511001_70536001_3C;SPAN=306;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:27:15.5:15.5,0,51.8:5:4:-15.52:16.64
16	72122752	770476:1	C	C[16:72212287[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=770476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_72201501_72226501_29C;SPAN=89535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:9:9:-48.1:48.1
16	72212287	770476:2	C	]16:72122752]C	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=770476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_72201501_72226501_29C;SPAN=89535;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:9:9:-48.1:48.1
16	74811117	771521:2	G	]7:20669897]G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=771521:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:20669897(+)-16:74811117(-)__16_74798501_74823501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
16	78122363	772813:1	T	]16:78137583]T	16	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=772813:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78130501_78155501_79C;SPAN=15220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:8:0:-16.57:18.51
16	78137583	772813:2	T	T[16:78122363[	16	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=772813:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78130501_78155501_79C;SPAN=15220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:35:16.7:16.7,0,69.5:8:0:-16.57:18.51
16	78199550	772890:1	C	C[16:78326597[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=772890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78326501_78351501_127C;SPAN=127047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:4:1.8:19.8,1.8,0:6:5:-19.8:19.8
16	78326597	772890:2	C	]16:78199550]C	19	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=772890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78326501_78351501_127C;SPAN=127047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:7:4:1.8:19.8,1.8,0:6:5:-19.8:19.8
16	78340090	772941:1	T	T[16:78456846[	27	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=772941:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:78340090(+)-16:78456846(-)__16_78449001_78474001D;SPAN=116756;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:0:11:-27.88:28.16
16	78456846	772941:2	A	]16:78340090]A	27	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=772941:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:78340090(+)-16:78456846(-)__16_78449001_78474001D;SPAN=116756;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:0:11:-27.88:28.16
16	81140260	774106:1	C	C[16:81140740[	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGAGGCAGAGGTTGCAGTGAGCCGAGATC;MAPQ=60;MATEID=774106:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_16_81119501_81144501_135C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:56:16:15.6:171.6,15.6,0:33:26:-171.6:171.6
16	81140740	774106:2	G	]16:81140260]G	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GGAGGCAGAGGTTGCAGTGAGCCGAGATC;MAPQ=60;MATEID=774106:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_16_81119501_81144501_135C;SPAN=480;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:56:16:15.6:171.6,15.6,0:33:26:-171.6:171.6
16	81577137	774271:1	A	]16:81578194]A	17	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=774271:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:81577137(-)-16:81578194(+)__16_81560501_81585501D;SPAN=1057;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:55:17.6:17.6,0,119.9:0:10:-17.55:22.02
16	81578194	774271:2	T	T[16:81577137[	17	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=774271:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:81577137(-)-16:81578194(+)__16_81560501_81585501D;SPAN=1057;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:55:17.6:17.6,0,119.9:0:10:-17.55:22.02
16	81765054	774339:1	C	]16:81765621]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CTCCAGCCTGGGTGACAGAGTGAGA;MAPQ=60;MATEID=774339:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_81756501_81781501_97C;SPAN=567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:53:90:77:149.6,0,77:53:0:-150.9:150.9
16	81765621	774339:2	A	A[16:81765054[	99	PASS	EVDNC=ASSMB;HOMSEQ=CTCCAGCCTGGGTGACAGAGTGAGA;MAPQ=60;MATEID=774339:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_81756501_81781501_97C;SPAN=567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:53:90:77:149.6,0,77:53:0:-150.9:150.9
16	82757477	774754:1	A	]16:82757614]A	47	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=774754:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_82736501_82761501_24C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:43:47.3:47.3,0,60.5:18:0:-47.33:47.43
16	82757614	774754:2	A	A[16:82757477[	47	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=774754:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_82736501_82761501_24C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:43:47.3:47.3,0,60.5:18:0:-47.33:47.43
16	84336396	775449:1	C	C[16:84336829[	0	PASS	EVDNC=ASSMB;HOMSEQ=GATCACGCCATTGCACTCCAGCCTGGGC;MAPQ=60;MATEID=775449:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_84329001_84354001_39C;SPAN=433;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:52:1.2:0,1.2,132:4:0:1.413:7.213
16	84336829	775449:2	G	]16:84336396]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GATCACGCCATTGCACTCCAGCCTGGGC;MAPQ=60;MATEID=775449:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_84329001_84354001_39C;SPAN=433;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:52:1.2:0,1.2,132:4:0:1.413:7.213
16	84467832	775519:1	C	C[16:84470510[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAGCTGCCCCAGGATGGACC;MAPQ=60;MATEID=775519:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_16_84451501_84476501_186C;SPAN=2678;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:36:26.3:26.3,0,62.6:10:3:-26.19:27.08
16	84470510	775519:2	C	]16:84467832]C	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAGCTGCCCCAGGATGGACC;MAPQ=60;MATEID=775519:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_16_84451501_84476501_186C;SPAN=2678;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:36:26.3:26.3,0,62.6:10:3:-26.19:27.08
16	85115938	775803:1	G	G[16:85116470[	58	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAG;MAPQ=60;MATEID=775803:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_85113001_85138001_101C;SPAN=532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:28:11.9:58.1,0,11.9:7:16:-59.83:59.83
16	85116470	775803:2	G	]16:85115938]G	58	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAG;MAPQ=60;MATEID=775803:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_85113001_85138001_101C;SPAN=532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:28:11.9:58.1,0,11.9:7:16:-59.83:59.83
16	85155108	775824:1	T	[16:85156196[T	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=775824:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_85137501_85162501_132C;SPAN=1088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:41:12.3:135.3,12.3,0:25:31:-135.3:135.3
16	85156196	775824:2	C	[16:85155108[C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=775824:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_85137501_85162501_132C;SPAN=1088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:41:12.3:135.3,12.3,0:25:31:-135.3:135.3
16	85268887	775861:1	G	G[16:85270785[	50	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=775861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_85260001_85285001_111C;SPAN=1898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:44:50.3:50.3,0,60.2:19:0:-50.35:50.4
16	85270785	775861:2	G	]16:85268887]G	50	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=775861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_85260001_85285001_111C;SPAN=1898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:44:50.3:50.3,0,60.2:19:0:-50.35:50.4
16	86250715	776364:1	T	T[16:86251011[	59	PASS	EVDNC=ASSMB;HOMSEQ=CTCCTGAATTCTT;MAPQ=60;MATEID=776364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_86240001_86265001_113C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66
16	86251011	776364:2	C	]16:86250715]C	59	PASS	EVDNC=ASSMB;HOMSEQ=CTCCTGAATTCTT;MAPQ=60;MATEID=776364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_86240001_86265001_113C;SPAN=296;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66
16	87502284	776954:1	C	]16:87502875]C	15	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=776954:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:87502284(-)-16:87502875(+)__16_87489501_87514501D;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:62:15.8:15.8,0,137.9:0:10:-15.58:21.45
16	87502875	776954:2	T	T[16:87502284[	15	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=776954:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:87502284(-)-16:87502875(+)__16_87489501_87514501D;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:62:15.8:15.8,0,137.9:0:10:-15.58:21.45
16	88053093	777152:1	T	]16:88053862]T	78	PASS	EVDNC=ASSMB;HOMSEQ=TAACAACCACTACCACCCCCACCTCC;MAPQ=60;MATEID=777152:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_88053001_88078001_33C;SPAN=769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:50:45.5:78.5,0,45.5:28:0:-78.78:78.78
16	88053862	777152:2	C	C[16:88053093[	78	PASS	EVDNC=ASSMB;HOMSEQ=TAACAACCACTACCACCCCCACCTCC;MAPQ=60;MATEID=777152:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_88053001_88078001_33C;SPAN=769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:50:45.5:78.5,0,45.5:28:0:-78.78:78.78
16	88079246	777183:1	C	C[16:88082061[	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=777183:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:88079246(+)-16:88082061(-)__16_88077501_88102501D;SPAN=2815;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:8:11.4:125.4,11.4,0:0:41:-125.4:125.4
16	88082061	777183:2	C	]16:88079246]C	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=777183:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:88079246(+)-16:88082061(-)__16_88077501_88102501D;SPAN=2815;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:41:8:11.4:125.4,11.4,0:0:41:-125.4:125.4
16	89167027	777836:1	G	]16:89259977]G	24	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=777836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_89253501_89278501_12C;SPAN=92950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
16	89259977	777836:2	T	T[16:89167027[	24	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=777836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_89253501_89278501_12C;SPAN=92950;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08
16	90040651	778139:1	C	C[Un_JTFH01000108v1_decoy:1[	69	PASS	EVDNC=ASSMB;HOMSEQ=GTGGGTTTCCTGTGGCC;MAPQ=60;MATEID=778139:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_90037501_90062501_109C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:19:6.3:69.3,6.3,0:23:0:-69.32:69.32
16	90040651	995643:1	C	C[Un_JTFH01000108v1_decoy:1[	79	PASS	EVDNC=ASSMB;HOMSEQ=GTGGGTTTCCTGTGGCC;INSERTION=ACCCAGCCACAGATGGCATTTTTTTTTTTGTAAATTATTTT;MAPQ=60;MATEID=995643:2;MATENM=1;NM=1;NUMPARTS=6;SCTG=c_951_1_3374_2C;SECONDARY;SPAN=-1;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:6:7.2:79.2,7.2,0:26:0:-79.22:79.22
17	494760	778350:1	G	[17:495848[G	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=778350:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_490001_515001_67C;SPAN=1088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:4:8:-22.4:22.76
17	495848	778350:2	A	[17:494760[A	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=778350:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_490001_515001_67C;SPAN=1088;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:4:8:-22.4:22.76
17	497801	148404:2	T	T[2:237561091[	21	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=148404:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_237552001_237577001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:41:21.5:21.5,0,80.9:7:6:-21.49:23.47
17	645848	778404:1	A	A[17:646775[	82	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACTGGAGATAGGCTCCCACACACATCTCCGTGACTGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGA;MAPQ=60;MATEID=778404:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_17_637001_662001_78C;SPAN=927;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:19:7.5:82.5,7.5,0:5:23:-82.52:82.52
17	646775	778404:2	G	]17:645848]G	82	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GACTGGAGATAGGCTCCCACACACATCTCCGTGACTGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGA;MAPQ=60;MATEID=778404:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_17_637001_662001_78C;SPAN=927;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:19:7.5:82.5,7.5,0:5:23:-82.52:82.52
17	820619	778462:1	A	A[17:821646[	46	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=GAGGCTGAGGCAGGAGAATGACGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACCCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAA;MAPQ=60;MATEID=778462:2;MATENM=5;NM=7;NUMPARTS=2;SCTG=c_17_808501_833501_85C;SPAN=1027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:2:14:-46.21:46.21
17	821646	778462:2	G	]17:820619]G	46	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGGCTGAGGCAGGAGAATGACGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACCCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAA;MAPQ=60;MATEID=778462:1;MATENM=7;NM=5;NUMPARTS=2;SCTG=c_17_808501_833501_85C;SPAN=1027;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:6:4.2:46.2,4.2,0:2:14:-46.21:46.21
17	898386	778509:1	T	T[17:899018[	89	PASS	EVDNC=ASSMB;INSERTION=GGTAAAGCTCTGTCACCCAGGCTGGAGTGCAGCGC;MAPQ=58;MATEID=778509:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_17_882001_907001_3C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:13:8.1:89.1,8.1,0:29:0:-89.12:89.12
17	899018	778509:2	C	]17:898386]C	89	PASS	EVDNC=ASSMB;INSERTION=GGTAAAGCTCTGTCACCCAGGCTGGAGTGCAGCGC;MAPQ=58;MATEID=778509:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_17_882001_907001_3C;SPAN=632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:13:8.1:89.1,8.1,0:29:0:-89.12:89.12
17	2816636	779292:1	T	T[17:2817924[	33	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=779292:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_2817501_2842501_63C;SPAN=1288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:6:3:33,3,0:11:0:-33.01:33.01
17	2817924	779292:2	C	]17:2816636]C	33	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=779292:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_2817501_2842501_63C;SPAN=1288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:6:3:33,3,0:11:0:-33.01:33.01
17	6030297	780488:1	C	C[17:6030604[	36	PASS	EVDNC=ASSMB;HOMSEQ=CAGCCATTTTC;MAPQ=60;MATEID=780488:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_6027001_6052001_69C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38
17	6030604	780488:2	C	]17:6030297]C	36	PASS	EVDNC=ASSMB;HOMSEQ=CAGCCATTTTC;MAPQ=60;MATEID=780488:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_6027001_6052001_69C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38
17	8032539	781221:1	A	]17:8232148]A	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGTC;MAPQ=60;MATEID=781221:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_8232001_8257001_59C;SPAN=199609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:7:9:-32.57:32.57
17	8232148	781221:2	T	T[17:8032539[	32	PASS	DISC_MAPQ=58;EVDNC=ASDIS;INSERTION=AGTC;MAPQ=60;MATEID=781221:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_8232001_8257001_59C;SPAN=199609;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:7:9:-32.57:32.57
17	8343327	781263:1	T	T[17:8344651[	39	PASS	EVDNC=ASSMB;HOMSEQ=GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTT;MAPQ=60;MATEID=781263:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_17_8330001_8355001_52C;SPAN=1324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
17	8344651	781263:2	G	]17:8343327]G	39	PASS	EVDNC=ASSMB;HOMSEQ=GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTT;MAPQ=60;MATEID=781263:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_17_8330001_8355001_52C;SPAN=1324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61
17	10235400	781898:2	T	]11:37407661]T	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=781898:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10216501_10241501_78C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:11:3:33,3,0:9:5:-33.01:33.01
17	10300117	781917:1	A	A[17:10300455[	13	PASS	EVDNC=ASSMB;HOMSEQ=AAGATCCTGATTCA;MAPQ=60;MATEID=781917:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10290001_10315001_20C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:58:13.4:13.4,0,132.2:9:0:-13.41:19.14
17	10300455	781917:2	A	]17:10300117]A	13	PASS	EVDNC=ASSMB;HOMSEQ=AAGATCCTGATTCA;MAPQ=60;MATEID=781917:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10290001_10315001_20C;SPAN=338;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:58:13.4:13.4,0,132.2:9:0:-13.41:19.14
17	13317181	782920:1	T	T[17:13317488[	12	PASS	EVDNC=ASSMB;HOMSEQ=AAGGGTAAAGACAGAATCTTT;MAPQ=60;MATEID=782920:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13303501_13328501_142C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
17	13317488	782920:2	A	]17:13317181]A	12	PASS	EVDNC=ASSMB;HOMSEQ=AAGGGTAAAGACAGAATCTTT;MAPQ=60;MATEID=782920:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13303501_13328501_142C;SPAN=307;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
17	13628399	783024:1	G	G[17:13629377[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGTAATCCCAGCACTTTGGGAGACTGAGGCGGG;MAPQ=60;MATEID=783024:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_13622001_13647001_14C;SPAN=978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:8:8:-46.21:46.21
17	13629377	783024:2	T	]17:13628399]T	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGTAATCCCAGCACTTTGGGAGACTGAGGCGGG;MAPQ=60;MATEID=783024:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_13622001_13647001_14C;SPAN=978;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:10:4.2:46.2,4.2,0:8:8:-46.21:46.21
17	13801243	783109:1	T	T[17:13801517[	66	PASS	EVDNC=ASSMB;HOMSEQ=GCATATATGTATTCTT;MAPQ=60;MATEID=783109:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13793501_13818501_4C;SPAN=274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:12:6:66,6,0:22:0:-66.02:66.02
17	13801517	783109:2	G	]17:13801243]G	66	PASS	EVDNC=ASSMB;HOMSEQ=GCATATATGTATTCTT;MAPQ=60;MATEID=783109:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13793501_13818501_4C;SPAN=274;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:12:6:66,6,0:22:0:-66.02:66.02
17	14286594	783261:1	A	A[17:14288239[	79	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=783261:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_17_14283501_14308501_0C;SPAN=1645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:15:7.2:79.2,7.2,0:26:0:-79.22:79.22
17	14288239	783261:2	A	]17:14286594]A	79	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=783261:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_17_14283501_14308501_0C;SPAN=1645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:26:15:7.2:79.2,7.2,0:26:0:-79.22:79.22
17	15886244	783823:1	T	T[17:15890467[	59	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=783823:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_15876001_15901001_41C;SPAN=4223;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41
17	15890467	783823:2	T	]17:15886244]T	59	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=783823:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_15876001_15901001_41C;SPAN=4223;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41
17	17252333	784312:1	C	]17:17252470]C	80	PASS	EVDNC=ASSMB;INSERTION=TACAGATAACGCTTTGGTGTGTGGGCTCTCCTGGGTA;MAPQ=60;MATEID=784312:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_17248001_17273001_6C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
17	17252470	784312:2	G	G[17:17252333[	80	PASS	EVDNC=ASSMB;INSERTION=TACAGATAACGCTTTGGTGTGTGGGCTCTCCTGGGTA;MAPQ=60;MATEID=784312:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_17248001_17273001_6C;SPAN=137;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75
17	18887840	784783:1	T	T[17:18888851[	56	PASS	EVDNC=ASSMB;HOMSEQ=AACTTGTTCTTTCTT;MAPQ=60;MATEID=784783:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_18865001_18890001_110C;SPAN=1011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:16:5.1:56.1,5.1,0:19:0:-56.11:56.11
17	18888851	784783:2	A	]17:18887840]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AACTTGTTCTTTCTT;MAPQ=60;MATEID=784783:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_18865001_18890001_110C;SPAN=1011;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:16:5.1:56.1,5.1,0:19:0:-56.11:56.11
17	19013598	784832:1	T	T]Un_KN707952v1_decoy:1383]	46	PASS	EVDNC=ASSMB;HOMSEQ=CATGGGGACTGTGGAGGCT;MAPQ=60;MATEID=784832:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_19012001_19037001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
17	19640120	784942:1	T	T[17:19640413[	36	PASS	EVDNC=ASSMB;HOMSEQ=AATAATAAAAATGCCT;MAPQ=60;MATEID=784942:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_19624501_19649501_32C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:45:36.8:36.8,0,76.4:15:0:-36.87:37.63
17	19640413	784942:2	A	]17:19640120]A	36	PASS	EVDNC=ASSMB;HOMSEQ=AATAATAAAAATGCCT;MAPQ=60;MATEID=784942:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_19624501_19649501_32C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:45:36.8:36.8,0,76.4:15:0:-36.87:37.63
17	19668598	784951:1	T	T[17:19669008[	62	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=784951:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_19649001_19674001_55C;SPAN=410;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
17	19669008	784951:2	T	]17:19668598]T	62	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=784951:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_19649001_19674001_55C;SPAN=410;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
17	19919536	785033:2	T	]10:132056598]T	22	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=785033:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:132056598(+)-17:19919536(-)__17_19918501_19943501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02
17	21317871	785842:1	T	[17:21778359[T	42	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=T;MAPQ=36;MATEID=785842:2;MATENM=20;NM=4;NUMPARTS=2;SCTG=c_17_21756001_21781001_18C;SPAN=460488;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:12:4:-43.71:43.71
17	21427160	785785:1	A	A[17:21713088[	24	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=785785:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21427160(+)-17:21713088(-)__17_21707001_21732001D;SPAN=285928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:0:9:-24.37:24.37
17	21713088	785785:2	A	]17:21427160]A	24	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=785785:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21427160(+)-17:21713088(-)__17_21707001_21732001D;SPAN=285928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:19:21.2:24.5,0,21.2:0:9:-24.37:24.37
17	21778359	785842:2	A	[17:21317871[A	42	PASS	DISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=T;MAPQ=24;MATEID=785842:1;MATENM=4;NM=20;NUMPARTS=2;SCTG=c_17_21756001_21781001_18C;SPAN=460488;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:12:4:-43.71:43.71
17	21814103	785911:2	N	]7:63016535]N	59	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=785911:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:63016535(+)-17:21814103(-)__17_21805001_21830001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41
17	21884550	787008:1	T	T[17:21987760[	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGGAATGGAATTGAATGGAATGGAAT;MAPQ=60;MATEID=787008:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_21878501_21903501_214C;SPAN=103210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:8:6:-31.39:32.26
17	21920248	801378:1	A	A[17:26877289[	9	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=801378:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21920248(+)-17:26877289(-)__17_26876501_26901501D;SPAN=4957041;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:83:9.8:9.8,0,197.9:0:10:-9.679:20.08
17	21950588	788019:1	T	]17:21950746]T	16	PASS	EVDNC=ASSMB;HOMSEQ=TGGAATGGA;MAPQ=60;MATEID=788019:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_21927501_21952501_14C;SPAN=158;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:118:16.4:16.4,0,280.4:15:0:-16.35:30.49
17	21950746	788019:2	A	A[17:21950588[	16	PASS	EVDNC=ASSMB;HOMSEQ=TGGAATGGA;MAPQ=60;MATEID=788019:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_21927501_21952501_14C;SPAN=158;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:118:16.4:16.4,0,280.4:15:0:-16.35:30.49
17	21987760	787008:2	A	]17:21884550]A	31	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ATGGAATGGAATTGAATGGAATGGAAT;MAPQ=60;MATEID=787008:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_21878501_21903501_214C;SPAN=103210;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:41:31.4:31.4,0,71:8:6:-31.39:32.26
17	22877406	788665:1	G	]17:23183141]G	19	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=788665:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:22877406(-)-17:23183141(+)__17_23177001_23202001D;SPAN=305735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89
17	23183141	788665:2	C	C[17:22877406[	19	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=788665:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:22877406(-)-17:23183141(+)__17_23177001_23202001D;SPAN=305735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89
17	23483975	789767:1	A	]17:23484332]A	99	PASS	DISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=AGAAGCCTTCTCAGAAA;MAPQ=13;MATEID=789767:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_23471001_23496001_74C;SPAN=357;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:12:9.9:108.9,9.9,0:30:8:-108.9:108.9
17	23484332	789767:2	A	A[17:23483975[	99	PASS	DISC_MAPQ=16;EVDNC=ASDIS;HOMSEQ=AGAAGCCTTCTCAGAAA;MAPQ=39;MATEID=789767:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_23471001_23496001_74C;SPAN=357;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:12:9.9:108.9,9.9,0:30:8:-108.9:108.9
17	24946097	793752:1	A	]17:24946925]A	26	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=793752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:24946097(-)-17:24946925(+)__17_24941001_24966001D;SPAN=828;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:6:2.4:26.4,2.4,0:0:9:-26.41:26.41
17	24946925	793752:2	T	T[17:24946097[	26	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=793752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:24946097(-)-17:24946925(+)__17_24941001_24966001D;SPAN=828;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:6:2.4:26.4,2.4,0:0:9:-26.41:26.41
17	25237545	794573:1	G	]17:26590930]G	23	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=794573:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:25237545(-)-17:26590930(+)__17_25235001_25260001D;SPAN=1353385;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
17	25539213	796561:1	A	]17:25539559]A	99	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AGCATTC;MAPQ=60;MATEID=796561:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_25872001_25897001_85C;SPAN=346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:0:11.1:122.1,11.1,0:40:0:-122.1:122.1
17	25539559	796561:2	C	C[17:25539213[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AGCATTC;MAPQ=28;MATEID=796561:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_25872001_25897001_85C;SPAN=346;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:0:11.1:122.1,11.1,0:40:0:-122.1:122.1
17	25637287	795758:1	A	]17:25637632]A	99	PASS	DISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=AGCATTC;MAPQ=19;MATEID=795758:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_25627001_25652001_95C;SPAN=345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:63:80:14:185.6,0,14:60:3:-193.9:193.9
17	25637632	795758:2	C	C[17:25637287[	99	PASS	DISC_MAPQ=21;EVDNC=ASDIS;HOMSEQ=AGCATTC;MAPQ=40;MATEID=795758:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_25627001_25652001_95C;SPAN=345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:63:80:14:185.6,0,14:60:3:-193.9:193.9
17	26256377	798613:1	A	A[17:26476143[	29	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=798613:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:26256377(+)-17:26476143(-)__17_26460001_26485001D;SPAN=219766;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:3:2.7:29.7,2.7,0:0:10:-29.71:29.71
17	26476143	798613:2	G	]17:26256377]G	29	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=798613:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:26256377(+)-17:26476143(-)__17_26460001_26485001D;SPAN=219766;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:3:2.7:29.7,2.7,0:0:10:-29.71:29.71
17	26590930	794573:2	A	A[17:25237545[	23	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=794573:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:25237545(-)-17:26590930(+)__17_25235001_25260001D;SPAN=1353385;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
17	26640334	798950:1	T	T[17:26640621[	89	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTAGAATCTGCAGGTGGACATTTGGGGCGCTTTGAGGCCAATGGAGAAAAAGGAAATCTCTTCACGTAAAAGCTATACAGAAGCATTCTCAGAAACTTCTTTGTGATATGTGCATTCAACTCACAGAATTGAACATTTTTTTTCATAGAGCAGATTTGAAACACTCTGTTGAATTTGCAAGTGGATATTTGGACGGCTTAGAGGCCTTTGTTGGAAACAAGGTATCTTCACATAAAAGCTAGACAGAAGCATTCTCAGAAGCTACTTTGTGATGTGTGCATTCAACTCACAGAGTTGAACCTTTCTTTTGATAGG;MAPQ=60;MATEID=798950:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=TTTTT;SCTG=c_17_26631501_26656501_88C;SPAN=287;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:6:9:89.9,9,0:33:0:-89.99:89.99
17	26640621	798950:2	A	]17:26640334]A	89	PASS	DISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTAGAATCTGCAGGTGGACATTTGGGGCGCTTTGAGGCCAATGGAGAAAAAGGAAATCTCTTCACGTAAAAGCTATACAGAAGCATTCTCAGAAACTTCTTTGTGATATGTGCATTCAACTCACAGAATTGAACATTTTTTTTCATAGAGCAGATTTGAAACACTCTGTTGAATTTGCAAGTGGATATTTGGACGGCTTAGAGGCCTTTGTTGGAAACAAGGTATCTTCACATAAAAGCTAGACAGAAGCATTCTCAGAAGCTACTTTGTGATGTGTGCATTCAACTCACAGAGTTGAACCTTTCTTTTGATAGG;MAPQ=60;MATEID=798950:1;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=TTTTT;SCTG=c_17_26631501_26656501_88C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:6:9:89.9,9,0:33:0:-89.99:89.99
17	26657609	798974:1	A	A[17:26683650[	34	PASS	DISC_MAPQ=1;EVDNC=ASDIS;HOMSEQ=ACAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGCATTCAACTCACAGAGTTGAACATTTCTTTTGACAGAGAAGTTTTGAAA;MAPQ=10;MATEID=798974:2;MATENM=6;NM=8;NUMPARTS=2;SCTG=c_17_26656001_26681001_40C;SPAN=26041;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:8:4:-34.32:34.32
17	26683650	798974:2	A	]17:26657609]A	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGCATTCAACTCACAGAGTTGAACATTTCTTTTGACAGAGAAGTTTTGAAA;MAPQ=60;MATEID=798974:1;MATENM=8;NM=6;NUMPARTS=2;SCTG=c_17_26656001_26681001_40C;SPAN=26041;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:8:4:-34.32:34.32
17	26701545	798997:1	A	]17:26702093]A	50	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=ATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTG;MAPQ=60;MATEID=798997:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_26680501_26705501_20C;SPAN=548;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:9:16:-51.49:51.49
17	26702093	798997:2	G	G[17:26701545[	50	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=ATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTG;MAPQ=60;MATEID=798997:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_26680501_26705501_20C;SPAN=548;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:9:16:-51.49:51.49
17	26843013	800758:1	A	A[17:26846576[	37	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATGGAATGGACTCGAATGGAATGGACTGGAA;MAPQ=60;MATEID=800758:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_26827501_26852501_447C;SPAN=3563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:89:37.7:37.7,0,186.2:8:16:-37.7:43.33
17	26846576	800758:2	G	]17:26843013]G	37	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAATGGAATGGACTCGAATGGAATGGACTGGAA;MAPQ=60;MATEID=800758:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_26827501_26852501_447C;SPAN=3563;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:89:37.7:37.7,0,186.2:8:16:-37.7:43.33
17	26877289	801378:2	A	]17:21920248]A	9	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=801378:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21920248(+)-17:26877289(-)__17_26876501_26901501D;SPAN=4957041;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:83:9.8:9.8,0,197.9:0:10:-9.679:20.08
17	27155352	801818:1	T	]17:27164868]T	34	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTG;MAPQ=60;MATEID=801818:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_27146001_27171001_15C;SPAN=9516;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:7:8:-34.32:34.32
17	27164868	801818:2	G	G[17:27155352[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTG;MAPQ=60;MATEID=801818:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_27146001_27171001_15C;SPAN=9516;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:7:8:-34.32:34.32
17	29271810	802159:1	C	]17:29456121]C	20	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGG;MAPQ=60;MATEID=802159:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_29449001_29474001_4C;SPAN=184311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:11:6.8:20,0,6.8:6:4:-20.32:20.32
17	29456121	802159:2	G	G[17:29271810[	20	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGG;MAPQ=60;MATEID=802159:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_29449001_29474001_4C;SPAN=184311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:11:6.8:20,0,6.8:6:4:-20.32:20.32
17	33736830	802912:2	G	[1:88507126[G	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=802912:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:88507126(-)-17:33736830(-)__17_33736501_33761501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51
17	33737644	802914:2	C	C]1:88507142]	52	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=802914:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_33736501_33761501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81
17	34545962	803094:1	A	A[17:34547600[	46	PASS	EVDNC=ASSMB;INSERTION=CTT;MAPQ=60;MATEID=803094:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_17_34545001_34570001_0C;SPAN=1638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21
17	34547600	803094:2	G	]17:34545962]G	46	PASS	EVDNC=ASSMB;INSERTION=CTT;MAPQ=60;MATEID=803094:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_17_34545001_34570001_0C;SPAN=1638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21
17	34977737	815353:1	G	]17:74777739]G	40	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCTTGGCCAACATGGCGAAACCCCGTCTCTACTAACAATATAAAAAAATTATCCAGGCGTGGTGGTGGGCACCTG;INSERTION=C;MAPQ=60;MATEID=815353:2;MATENM=1;NM=0;NUMPARTS=3;REPSEQ=AAA;SCTG=c_17_74774001_74799001_8C;SPAN=39800002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:11:12:-41.65:41.65
17	36446655	803455:1	A	A[17:36459258[	33	PASS	DISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=803455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:36446655(+)-17:36459258(-)__17_36456001_36481001D;SPAN=12603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:5:3:33,3,0:0:11:-33.01:33.01
17	36459258	803455:2	T	]17:36446655]T	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=803455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:36446655(+)-17:36459258(-)__17_36456001_36481001D;SPAN=12603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:5:3:33,3,0:0:11:-33.01:33.01
17	39616248	803979:1	A	]17:39786889]A	28	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=803979:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_39763501_39788501_24C;SPAN=170641;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
17	39729080	804185:1	C	]17:40691183]C	42	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=804185:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_40670001_40695001_8C;SPAN=962103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91
17	39786889	803979:2	G	G[17:39616248[	28	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=803979:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_39763501_39788501_24C;SPAN=170641;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
17	40691183	804185:2	T	T[17:39729080[	42	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=804185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_40670001_40695001_8C;SPAN=962103;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91
17	44048921	805051:2	G	[1:188086594[G	49	PASS	DISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AGC;MAPQ=60;MATEID=805051:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44026501_44051501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:15:4.5:49.5,4.5,0:13:9:-49.51:49.51
17	44198003	805152:1	C	]17:44358211]C	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGTGGGG;MAPQ=60;MATEID=805152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44345001_44370001_15C;SPAN=160208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:12:5:-48.04:48.04
17	44358211	805152:2	G	G[17:44198003[	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGTGGGG;MAPQ=60;MATEID=805152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44345001_44370001_15C;SPAN=160208;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:12:5:-48.04:48.04
17	45488644	934007:1	T	]X:68328802]T	52	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=934007:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:45488644(-)-23:68328802(+)__23_68306001_68331001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81
17	47670040	805985:1	A	]20:53866284]A	23	PASS	EVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=805985:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_47652501_47677501_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
17	48538270	806286:1	G	]17:48539858]G	85	PASS	DISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=GGA;MAPQ=60;MATEID=806286:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_48534501_48559501_6C;SPAN=1588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:36:3.2:85.7,0,3.2:17:17:-89.88:89.88
17	48538441	806287:1	G	G[17:48539859[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=806287:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_48534501_48559501_8C;SPAN=1418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:37:10.2:112.2,10.2,0:37:0:-112.2:112.2
17	48539858	806286:2	A	A[17:48538270[	85	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGA;MAPQ=60;MATEID=806286:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_48534501_48559501_6C;SPAN=1588;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:36:3.2:85.7,0,3.2:17:17:-89.88:89.88
17	48539859	806287:2	A	]17:48538441]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=806287:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_48534501_48559501_8C;SPAN=1418;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:37:10.2:112.2,10.2,0:37:0:-112.2:112.2
17	48813086	887898:1	A	[20:59473634[A	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=887898:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_31C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:48:13.1:13.1,0,105.5:4:6:-12.92:17.28
17	49274477	806552:1	A	A[17:49275757[	18	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=806552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:49274477(+)-17:49275757(-)__17_49269501_49294501D;SPAN=1280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
17	49275757	806552:2	T	]17:49274477]T	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=806552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:49274477(+)-17:49275757(-)__17_49269501_49294501D;SPAN=1280;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
17	50673981	930954:1	T	T]X:46827692]	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT;MAPQ=60;MATEID=930954:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_46819501_46844501_18C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:3:7:-29.71:29.71
17	50783035	807096:1	C	]17:51292796]C	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=807096:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_12C;SPAN=509761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:9:9:-32.3:32.3
17	51221496	807098:1	C	]17:51300764]C	50	PASS	EVDNC=ASSMB;HOMSEQ=CAAA;MAPQ=60;MATEID=807098:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_97C;SPAN=79268;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:17:0:-52.77:52.77
17	51292796	807096:2	C	C[17:50783035[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=807096:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_12C;SPAN=509761;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:26:32.3:32.3,0,32.3:9:9:-32.3:32.3
17	51300764	807098:2	A	A[17:51221496[	50	PASS	EVDNC=ASSMB;HOMSEQ=CAAA;MAPQ=60;MATEID=807098:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_97C;SPAN=79268;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:21:0.8:50.3,0,0.8:17:0:-52.77:52.77
17	51419125	807186:1	A	]17:51459549]A	31	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=807186:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_51450001_51475001_71C;SPAN=40424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
17	51459549	807186:2	C	C[17:51419125[	31	PASS	EVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=807186:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_51450001_51475001_71C;SPAN=40424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08
17	52598598	995132:1	A	]Un_JTFH01000033v1_decoy:5897]A	95	PASS	EVDNC=ASSMB;HOMSEQ=AGGC;MAPQ=60;MATEID=995132:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_876_1_5898_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:9:8.7:95.7,8.7,0:32:0:-95.72:95.72
17	52598606	807511:1	G	G]X:49142499]	29	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=807511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:52598606(+)-23:49142499(+)__17_52577001_52602001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3
17	53110849	807783:1	C	C[17:53111170[	18	PASS	EVDNC=ASSMB;INSERTION=ATAATTATGAT;MAPQ=60;MATEID=807783:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_53091501_53116501_23C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76
17	53111170	807783:2	T	]17:53110849]T	18	PASS	EVDNC=ASSMB;INSERTION=ATAATTATGAT;MAPQ=60;MATEID=807783:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_53091501_53116501_23C;SPAN=321;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76
17	53111341	807773:2	T	[16:6222194[T	55	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=807773:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_53091501_53116501_47C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:26:9.2:55.4,0,9.2:14:8:-57.2:57.2
17	53112039	750485:2	T	T]16:6221570]	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=750485:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:6221570(+)-17:53112039(+)__16_6198501_6223501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29
17	53662312	807970:1	A	]17:53672240]A	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAC;MAPQ=60;MATEID=807970:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_53655001_53680001_42C;SPAN=9928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:7:5:-13.76:17.53
17	53672240	807970:2	A	A[17:53662312[	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAC;MAPQ=60;MATEID=807970:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_53655001_53680001_42C;SPAN=9928;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:45:13.7:13.7,0,99.5:7:5:-13.76:17.53
17	54452322	808244:1	G	G[17:54455866[	85	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=808244:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_54439001_54464001_1C;SPAN=3544;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:23:7.8:85.8,7.8,0:28:0:-85.82:85.82
17	54455866	808244:2	A	]17:54452322]A	85	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=808244:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_54439001_54464001_1C;SPAN=3544;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:23:7.8:85.8,7.8,0:28:0:-85.82:85.82
17	55763133	916311:1	G	G[22:28669793[	73	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=ACTAAGCAAATTATTTAAAATAATAATTTTAAAATAAAATGACTAAGCAAATTATTTAAAATAATAATTTGCTTAGTCATTTATTCA;MAPQ=60;MATEID=916311:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_22_28665001_28690001_87C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:138:73.7:73.7,0,271.7:34:5:-73.44:79.95
17	55763576	916313:1	C	]22:28669943]C	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916313:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:55763576(-)-22:28669943(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:71:26.3:26.3,0,151.7:0:14:-26.26:31.38
17	56544115	808859:1	T	]17:56662442]T	22	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=808859:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:56544115(-)-17:56662442(+)__17_56521501_56546501D;SPAN=118327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
17	56662442	808859:2	G	G[17:56544115[	22	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=808859:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:56544115(-)-17:56662442(+)__17_56521501_56546501D;SPAN=118327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62
17	57501629	809228:2	A	]14:64280468]A	21	PASS	EVDNC=ASSMB;INSERTION=AGAACTTGTTTTATTCACCTCATCCC;MAPQ=60;MATEID=809228:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_57501501_57526501_45C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11
17	57501774	462287:2	A	A]8:90572448]	29	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=462287:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_90552001_90577001_44C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:7:7:-29.85:29.85
17	57610549	809267:1	G	G[17:57612553[	89	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=809267:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:57610549(+)-17:57612553(-)__17_57599501_57624501D;SPAN=2004;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:7:8.1:89.1,8.1,0:0:29:-89.12:89.12
17	57612553	809267:2	C	]17:57610549]C	89	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=809267:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:57610549(+)-17:57612553(-)__17_57599501_57624501D;SPAN=2004;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:7:8.1:89.1,8.1,0:0:29:-89.12:89.12
17	58558972	809610:2	C	[3:61619502[C	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=809610:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58555001_58580001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:99:40:27.6:303.6,27.6,0:43:68:-303.7:303.7
17	58608924	809639:2	A	[3:61639528[A	0	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=809639:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_58604001_58629001_60C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:106:0.2:0.2,0,264.2:3:7:0.08672:16.63
17	58625792	881140:1	G	[20:42374557[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=881140:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42360501_42385501_15C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:34:13.5:148.5,13.5,0:31:28:-148.5:148.5
17	58626292	809653:1	G	G[17:58626590[	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAGCCTCCTGGCTGGGTG;MAPQ=60;MATEID=809653:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58604001_58629001_107C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:171:31.3:0,31.3,491.8:5:0:31.56:6.879
17	58626590	809653:2	A	]17:58626292]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AAAGCCTCCTGGCTGGGTG;MAPQ=60;MATEID=809653:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58604001_58629001_107C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:171:31.3:0,31.3,491.8:5:0:31.56:6.879
17	58731201	809737:2	T	T[3:63976823[	38	PASS	EVDNC=ASSMB;HOMSEQ=ACCT;MAPQ=60;MATEID=809737:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_58726501_58751501_107C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:88:38:38,0,183.2:19:0:-37.98:43.43
17	58962856	809881:2	G	[1:111822912[G	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=809881:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58947001_58972001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:50:105:99:135.5,0,128.9:34:28:-135.5:135.5
17	59122425	809904:1	A	A[17:59829566[	99	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=809904:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_59118501_59143501_43C;SPAN=707141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:58:88:54.5:166.7,0,54.5:58:0:-169.8:169.8
17	59286635	809997:1	C	C[17:59288345[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=809997:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:59286635(+)-17:59288345(-)__17_59265501_59290501D;SPAN=1710;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:0:16:-48.1:48.1
17	59288345	809997:2	A	]17:59286635]A	46	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=809997:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:59286635(+)-17:59288345(-)__17_59265501_59290501D;SPAN=1710;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:22:7.1:46.7,0,7.1:0:16:-48.1:48.1
17	59829566	809904:2	A	]17:59122425]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=809904:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_59118501_59143501_43C;SPAN=707141;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:58:88:54.5:166.7,0,54.5:58:0:-169.8:169.8
17	59896324	630789:2	G	G[12:61805169[	17	PASS	EVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=630789:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_61789001_61814001_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
17	60735668	27442:2	T	[1:113813812[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=27442:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113802501_113827501_57C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:87:97.7:120.8,0,97.7:23:34:-120.9:120.9
17	60756794	24645:2	T	]1:106260694]T	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=24645:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106256501_106281501_135C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:87:1.2:0,1.2,221.1:5:2:1.348:12.76
17	60802106	810346:2	G	G[3:63718451[	99	PASS	EVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=810346:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_60784501_60809501_53C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:51:80:53.6:146,0,53.6:51:0:-148.1:148.1
17	61210341	888229:1	C	[20:60270342[C	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TGTG;MAPQ=60;MATEID=888229:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60270001_60295001_15C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:97:155:99:276.8,0,111.8:59:56:-280.3:280.3
17	61398559	884135:1	G	[20:50110068[G	17	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=884135:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_50102501_50127501_30C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:4:6:-16.85:18.63
17	61570856	414626:2	T	T[7:94308706[	24	PASS	EVDNC=ASSMB;INSERTION=GACTTGCTCT;MAPQ=60;MATEID=414626:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_94300501_94325501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67
17	61814571	25023:2	C	[1:106982020[C	37	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=25023:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106967001_106992001_105C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:68:37.1:37.1,0,132.8:15:5:-37:40.1
17	61909172	886070:1	C	C[20:55576908[	99	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=886070:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_55566001_55591001_71C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:167:99:151.4,0,266.9:60:0:-151.1:152.9
17	61924313	882804:1	C	]20:47143282]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=882804:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:119:99:118.4,0,181.1:46:0:-118.4:119.1
17	61924536	882806:1	A	A[20:47149699[	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=882806:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_44C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:88:79:24.6:270.6,24.6,0:20:79:-270.7:270.7
17	62000916	882808:1	C	]20:47150452]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CCA;MAPQ=56;MATEID=882808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:62:129:99:168.5,0,155.3:62:0:-168.4:168.4
17	62017132	886073:1	T	[20:55584209[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TCAA;MAPQ=60;MATEID=886073:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_55566001_55591001_45C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:74:124:99:209.6,0,100.7:41:53:-211.4:211.4
17	62018502	810629:1	C	C[17:62110864[	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=810629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62107501_62132501_14C;SPAN=92362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:62:179:99:154.4,0,296.3:62:0:-154.3:156.8
17	62110864	810629:2	C	]17:62018502]C	99	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=810629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62107501_62132501_14C;SPAN=92362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:62:179:99:154.4,0,296.3:62:0:-154.3:156.8
17	62135637	811105:1	G	[17:62961840[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=811105:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62940501_62965501_5C;SPAN=826203;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:104:168:99:296.3,0,124.7:69:73:-299.8:299.8
17	62660892	810968:1	A	A]20:61529111]	60	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=810968:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:62660892(+)-20:61529111(+)__17_62646501_62671501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:32:17.6:60.5,0,17.6:0:21:-61.42:61.42
17	62812070	889980:1	T	]20:63870915]T	12	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GTGTG;MAPQ=60;MATEID=889980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63847001_63872001_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:14:12.5:12.5,0,22.4:2:4:-12.57:12.73
17	62961840	811105:2	C	[17:62135637[C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=811105:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62940501_62965501_5C;SPAN=826203;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:104:168:99:296.3,0,124.7:69:73:-299.8:299.8
17	62965942	886924:1	C	C[20:57100409[	99	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=886924:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_57085001_57110001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:48:156:99:114.8,0,276.5:48:0:-114.6:118.4
17	63001506	889876:1	T	[20:63664882[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=889876:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63651001_63676001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:52:64:5.3:153.8,0,5.3:36:18:-161.6:161.6
17	63002553	882810:1	A	A[20:47156833[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=882810:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_67C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:71:137:99:196.1,0,146.6:71:0:-196.2:196.2
17	63093446	811194:1	G	G]17:63101678]	50	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=811194:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63093446(+)-17:63101678(+)__17_63087501_63112501D;SPAN=8232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:80:50.3:50.3,0,149.3:0:22:-50.14:52.96
17	63101678	811194:2	A	A]17:63093446]	50	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=811194:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63093446(+)-17:63101678(+)__17_63087501_63112501D;SPAN=8232;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:80:50.3:50.3,0,149.3:0:22:-50.14:52.96
17	63842219	811520:1	C	]17:63878730]C	36	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=60;MATEID=811520:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_63871501_63896501_153C;SPAN=36511;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:35:36.5:36.5,0,49.7:11:12:-36.38:36.52
17	63863783	811504:1	G	G[17:63887370[	15	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=811504:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63863783(+)-17:63887370(-)__17_63847001_63872001D;SPAN=23587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:0:8:-15.73:18.19
17	63878730	811520:2	G	G[17:63842219[	36	PASS	DISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=27;MATEID=811520:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_63871501_63896501_153C;SPAN=36511;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:35:36.5:36.5,0,49.7:11:12:-36.38:36.52
17	63887370	811504:2	C	]17:63863783]C	15	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=811504:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63863783(+)-17:63887370(-)__17_63847001_63872001D;SPAN=23587;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:38:15.8:15.8,0,78.5:0:8:-15.73:18.19
17	64135849	811613:1	C	C[17:64136778[	95	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCC;MAPQ=60;MATEID=811613:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_64116501_64141501_14C;SPAN=929;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:16:8.7:95.7,8.7,0:15:21:-95.72:95.72
17	64136778	811613:2	G	]17:64135849]G	95	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCC;MAPQ=60;MATEID=811613:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_64116501_64141501_14C;SPAN=929;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:16:8.7:95.7,8.7,0:15:21:-95.72:95.72
17	64310797	811695:1	G	]20:54940897]G	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CAACAAATGTTTATTGAGTTTATACTATAAACCTTCTCCTCTTTCCTTTGCTGACTCTCTGCCTGGAACT;MAPQ=60;MATEID=811695:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_64288001_64313001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:118:103:33:363,33,0:118:0:-363.1:363.1
17	65276006	811993:1	T	T[17:65276255[	66	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GCCTCGGCCTCCCAAAGTGCTGGGATTACCGGCATGAGCCACCGCACCCGGCCTATAGCAGCATTATTCTT;MAPQ=60;MATEID=811993:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_65268001_65293001_24C;SPAN=249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:12:13:-66.02:66.02
17	65276255	811993:2	G	]17:65276006]G	66	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTCGGCCTCCCAAAGTGCTGGGATTACCGGCATGAGCCACCGCACCCGGCCTATAGCAGCATTATTCTT;MAPQ=60;MATEID=811993:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_65268001_65293001_24C;SPAN=249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:16:6:66,6,0:12:13:-66.02:66.02
17	65499944	812061:1	G	]17:65500418]G	35	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=812061:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:65499944(-)-17:65500418(+)__17_65488501_65513501D;SPAN=474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:62:35.6:35.6,0,118.1:0:16:-35.39:38
17	65500418	812061:2	A	A[17:65499944[	35	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=812061:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:65499944(-)-17:65500418(+)__17_65488501_65513501D;SPAN=474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:62:35.6:35.6,0,118.1:0:16:-35.39:38
17	66203075	812369:1	A	]17:66215365]A	19	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=812369:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_66199001_66224001_105C;SPAN=12290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:8:7:-19.52:22.68
17	66215365	812369:2	A	A[17:66203075[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=812369:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_66199001_66224001_105C;SPAN=12290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:48:19.7:19.7,0,98.9:8:7:-19.52:22.68
17	66268939	812410:1	G	G[17:66269997[	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATGTTTTAAG;MAPQ=60;MATEID=812410:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_66248001_66273001_0C;SPAN=1058;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:36:6.6:102.3,6.6,0:32:0:-102.8:102.8
17	66269997	812410:2	A	]17:66268939]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAATGTTTTAAG;MAPQ=60;MATEID=812410:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_66248001_66273001_0C;SPAN=1058;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:36:6.6:102.3,6.6,0:32:0:-102.8:102.8
17	66641155	812584:2	T	]6:13191316]T	40	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=812584:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:13191316(+)-17:66641155(-)__17_66640001_66665001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:0:15:-39.96:39.98
17	68005944	813236:2	G	G[16:24412394[	49	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=813236:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:24412394(-)-17:68005944(+)__17_67987501_68012501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51
17	69091525	813744:1	T	T[17:69091822[	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAAATAGACTTCTT;MAPQ=60;MATEID=813744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_69090001_69115001_19C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:43:5.4:118.8,5.4,0:38:0:-121.8:121.8
17	69091822	813744:2	C	]17:69091525]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CCAAATAGACTTCTT;MAPQ=60;MATEID=813744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_69090001_69115001_19C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:43:5.4:118.8,5.4,0:38:0:-121.8:121.8
17	69309485	887352:1	A	]20:58273305]A	15	PASS	EVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=887352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58261001_58286001_61C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78
17	69341591	813847:1	C	C]17:75821480]	62	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=813847:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:69341591(+)-17:75821480(+)__17_69335001_69360001D;SPAN=6479889;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:16:5.7:62.7,5.7,0:0:21:-62.72:62.72
17	72085980	814650:1	G	]17:72298446]G	75	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=41;MATEID=814650:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72275001_72300001_17C;SPAN=212466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:25:6.9:75.9,6.9,0:9:24:-75.92:75.92
17	72298446	814650:2	G	G[17:72085980[	75	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=814650:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72275001_72300001_17C;SPAN=212466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:25:6.9:75.9,6.9,0:9:24:-75.92:75.92
17	72685322	814760:1	T	]17:72685450]T	82	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=814760:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72667001_72692001_1C;SPAN=128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:49:39.2:82.1,0,39.2:29:0:-82.67:82.67
17	72685450	814760:2	T	T[17:72685322[	82	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=814760:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72667001_72692001_1C;SPAN=128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:49:39.2:82.1,0,39.2:29:0:-82.67:82.67
17	72701864	814770:1	G	]17:72702013]G	43	PASS	EVDNC=ASSMB;HOMSEQ=GCTGAGGTGG;MAPQ=60;MATEID=814770:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_72691501_72716501_15C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:35:43.1:43.1,0,43.1:16:0:-42.98:42.98
17	72702013	814770:2	G	G[17:72701864[	43	PASS	EVDNC=ASSMB;HOMSEQ=GCTGAGGTGG;MAPQ=60;MATEID=814770:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_72691501_72716501_15C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:35:43.1:43.1,0,43.1:16:0:-42.98:42.98
17	72819091	814807:1	C	C[17:72825222[	56	PASS	EVDNC=ASSMB;HOMSEQ=TCC;MAPQ=60;MATEID=814807:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_17_72814001_72839001_4C;SPAN=6131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
17	72825222	814807:2	T	]17:72819091]T	56	PASS	EVDNC=ASSMB;HOMSEQ=TCC;MAPQ=60;MATEID=814807:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_17_72814001_72839001_4C;SPAN=6131;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
17	72880967	814830:1	C	C[Un_KN707893v1_decoy:1[	49	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=814830:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72863001_72888001_3C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:17:4.5:49.5,4.5,0:15:0:-48.04:48.04
17	72880967	991392:1	C	C[Un_KN707893v1_decoy:1[	52	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=991392:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=CC;SCTG=c_744_1_8049_5C;SPAN=-1;SUBN=9;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:6:4.8:52.8,4.8,0:18:0:-52.81:52.81
17	74777739	815353:2	G	G[17:34977737[	40	PASS	DISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCTTGGCCAACATGGCGAAACCCCGTCTCTACTAACAATATAAAAAAATTATCCAGGCGTGGTGGTGGGCACCTG;INSERTION=C;MAPQ=25;MATEID=815353:1;MATENM=0;NM=1;NUMPARTS=3;REPSEQ=AAA;SCTG=c_17_74774001_74799001_8C;SPAN=39800002;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:20:7.7:40.7,0,7.7:11:12:-41.65:41.65
17	75259894	815709:1	A	]17:75528391]A	26	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=815709:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75509001_75534001_14C;SPAN=268497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
17	75280201	885044:1	T	]20:52003779]T	61	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=885044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51989001_52014001_51C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62
17	75431293	815914:1	G	]17:76013043]G	38	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC;MAPQ=60;MATEID=815914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75999001_76024001_11C;SPAN=581750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:12:5:-39.01:39.01
17	75514279	815782:1	A	]17:75693640]A	23	PASS	EVDNC=ASSMB;INSERTION=ATTTCCT;MAPQ=60;MATEID=815782:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75680501_75705501_62C;SPAN=179361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
17	75528391	815709:2	A	A[17:75259894[	26	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=815709:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75509001_75534001_14C;SPAN=268497;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42
17	75693640	815782:2	C	C[17:75514279[	23	PASS	EVDNC=ASSMB;INSERTION=ATTTCCT;MAPQ=60;MATEID=815782:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75680501_75705501_62C;SPAN=179361;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42
17	75821480	813847:2	C	C]17:69341591]	62	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=813847:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:69341591(+)-17:75821480(+)__17_69335001_69360001D;SPAN=6479889;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:16:5.7:62.7,5.7,0:0:21:-62.72:62.72
17	76013043	815914:2	C	C[17:75431293[	38	PASS	DISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC;MAPQ=28;MATEID=815914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75999001_76024001_11C;SPAN=581750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:18:5:38,0,5:12:5:-39.01:39.01
17	78861205	816744:1	C	]17:78878251]C	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCC;MAPQ=60;MATEID=816744:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_78841001_78866001_7C;SPAN=17046;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:3:10:-31.6:31.6
17	78878251	816744:2	C	C[17:78861205[	31	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCC;MAPQ=60;MATEID=816744:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_78841001_78866001_7C;SPAN=17046;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:3:10:-31.6:31.6
17	79555272	816912:1	T	]17:79555909]T	50	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=816912:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:79555272(-)-17:79555909(+)__17_79551501_79576501D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33
17	79555909	816912:2	T	T[17:79555272[	50	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=816912:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:79555272(-)-17:79555909(+)__17_79551501_79576501D;SPAN=637;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33
17	80024303	817074:1	C	]17:80024763]C	54	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=817074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:80024303(-)-17:80024763(+)__17_80017001_80042001D;SPAN=460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:40:44.9:54.8,0,44.9:0:20:-54.82:54.82
17	80024763	817074:2	A	A[17:80024303[	54	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=817074:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:80024303(-)-17:80024763(+)__17_80017001_80042001D;SPAN=460;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:40:44.9:54.8,0,44.9:0:20:-54.82:54.82
17	80488068	817257:1	G	G[17:80489964[	49	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGTGGAGGGGAGGGACGCGGTGGAG;MAPQ=60;MATEID=817257:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_80482501_80507501_16C;SECONDARY;SPAN=1896;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:4:4.5:49.5,4.5,0:3:14:-49.51:49.51
17	80489964	817257:2	G	]17:80488068]G	49	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GGTGGAGGGGAGGGACGCGGTGGAG;MAPQ=60;MATEID=817257:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_80482501_80507501_16C;SECONDARY;SPAN=1896;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:4:4.5:49.5,4.5,0:3:14:-49.51:49.51
17	80497949	817261:1	T	]17:80498108]T	21	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTGTTGTGTGTATATGTGAGTGTG;MAPQ=56;MATEID=817261:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_17_80482501_80507501_4C;SPAN=159;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:65:21.5:21.5,0,140.3:12:0:-21.34:26.51
17	80498108	817261:2	G	G[17:80497949[	21	PASS	EVDNC=ASSMB;HOMSEQ=TGTGTGTGTTGTGTGTATATGTGAGTGTG;MAPQ=60;MATEID=817261:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_17_80482501_80507501_4C;SPAN=159;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:65:21.5:21.5,0,140.3:12:0:-21.34:26.51
18	3211874	819499:1	A	]18:3280177]A	53	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=819499:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_3258501_3283501_0C;SPAN=68303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
18	3280177	819499:2	A	A[18:3211874[	53	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=819499:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_3258501_3283501_0C;SPAN=68303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29
18	6317356	12977:2	A	A[1:53952995[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_190C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:52:15.2:15.2,0,114.2:6:3:-15.09:19.61
18	6432597	820234:2	A	[14:47694624[A	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=820234:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_6419001_6444001_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:13:4.2:46.2,4.2,0:11:5:-46.21:46.21
18	6432646	820233:2	T	T]14:47514459]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820233:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47514459(+)-18:6432646(+)__18_6419001_6444001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74
18	6914999	820340:1	A	]18:6923688]A	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820340:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:6914999(-)-18:6923688(+)__18_6909001_6934001D;SPAN=8689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
18	6923688	820340:2	T	T[18:6914999[	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820340:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:6914999(-)-18:6923688(+)__18_6909001_6934001D;SPAN=8689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73
18	8888408	820893:1	T	T[18:9170010[	22	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=820893:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888408(+)-18:9170010(-)__18_9163001_9188001D;SPAN=281602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76
18	8888538	820894:1	A	]18:9170224]A	42	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=820894:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888538(-)-18:9170224(+)__18_9163001_9188001D;SPAN=281686;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:0:14:-43.71:43.71
18	9170010	820893:2	T	]18:8888408]T	22	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=820893:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888408(+)-18:9170010(-)__18_9163001_9188001D;SPAN=281602;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76
18	9170224	820894:2	G	G[18:8888538[	42	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=820894:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888538(-)-18:9170224(+)__18_9163001_9188001D;SPAN=281686;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:17:1.2:42.9,1.2,0:0:14:-43.71:43.71
18	12202407	69895:2	A	]2:6658148]A	28	PASS	DISC_MAPQ=13;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=69895:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:6658148(+)-18:12202407(-)__2_6639501_6664501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
18	14406760	822300:2	G	G]13:18652931]	20	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=822300:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:18652931(+)-18:14406760(+)__18_14406001_14431001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65
18	14641277	822415:1	T	]18:14641411]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TCTCCCGCTTGCCGCCCTCTTTTCCCC;MAPQ=42;MATEID=822415:2;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_18_14626501_14651501_25C;SPAN=134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
18	14641411	822415:2	C	C[18:14641277[	29	PASS	EVDNC=ASSMB;HOMSEQ=TCTCCCGCTTGCCGCCCTCTTTTCCCC;MAPQ=60;MATEID=822415:1;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_18_14626501_14651501_25C;SPAN=134;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:26:29:29,0,35.6:11:0:-29:29.05
18	15388488	822796:1	G	G[18:15389964[	89	PASS	DISC_MAPQ=10;EVDNC=ASDIS;HOMSEQ=GAGCAGCTTTGAAACACTTTTTTTGTAGAATCTGCAAGTGGACATTTGGAGCACTTTGAG;MAPQ=60;MATEID=822796:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_18_15386001_15411001_113C;SPAN=1476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:48:29.6:89,0,29.6:17:19:-90.3:90.3
18	15389964	822796:2	G	]18:15388488]G	89	PASS	DISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=GAGCAGCTTTGAAACACTTTTTTTGTAGAATCTGCAAGTGGACATTTGGAGCACTTTGAG;MAPQ=60;MATEID=822796:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_18_15386001_15411001_113C;SPAN=1476;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:48:29.6:89,0,29.6:17:19:-90.3:90.3
18	15472242	822965:1	G	]18:15610395]G	39	PASS	DISC_MAPQ=13;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=822965:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15472242(-)-18:15610395(+)__18_15606501_15631501D;SPAN=138153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61
18	15473014	823058:1	C	C[18:15699547[	26	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=823058:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15473014(+)-18:15699547(-)__18_15680001_15705001D;SPAN=226533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09
18	15484866	823029:1	C	C[18:15670595[	38	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=823029:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15484866(+)-18:15670595(-)__18_15655501_15680501D;SPAN=185729;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
18	15512491	822922:1	A	A[18:15572260[	26	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=822922:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15512491(+)-18:15572260(-)__18_15557501_15582501D;SPAN=59769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
18	15572260	822922:2	T	]18:15512491]T	26	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=822922:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15512491(+)-18:15572260(-)__18_15557501_15582501D;SPAN=59769;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
18	15573653	823140:1	T	T[18:15770472[	99	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=823140:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573653(+)-18:15770472(-)__18_15753501_15778501D;SPAN=196819;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
18	15573782	823142:1	C	]18:15772299]C	26	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=823142:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573782(-)-18:15772299(+)__18_15753501_15778501D;SPAN=198517;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	15577908	822942:1	G	G[18:15776457[	64	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=822942:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15577908(+)-18:15776457(-)__18_15557501_15582501D;SPAN=198549;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:0:22:-67.65:67.65
18	15582223	822954:1	T	]18:15743887]T	39	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=822954:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15582223(-)-18:15743887(+)__18_15582001_15607001D;SPAN=161664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41
18	15593264	823146:1	G	G[18:15757733[	25	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=823146:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15593264(+)-18:15757733(-)__18_15753501_15778501D;SPAN=164469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99
18	15598663	822950:2	G	]9:65079191]G	23	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=822950:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:65079191(+)-18:15598663(-)__18_15582001_15607001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
18	15610395	822965:2	T	T[18:15472242[	39	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=822965:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15472242(-)-18:15610395(+)__18_15606501_15631501D;SPAN=138153;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61
18	15670595	823029:2	C	]18:15484866]C	38	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=823029:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15484866(+)-18:15670595(-)__18_15655501_15680501D;SPAN=185729;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65
18	15691965	823077:1	A	A[18:20640424[	99	PASS	DISC_MAPQ=36;EVDNC=ASDIS;INSERTION=TCCCTCTTTTTATAGAATTTAAAACTGGATATATGGATAGCTCTAACTATTTCTTTATAAACGTT;MAPQ=60;MATEID=823077:2;MATENM=6;NM=5;NUMPARTS=2;SCTG=c_18_15680001_15705001_713C;SPAN=4948459;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:8:9:99,9,0:30:5:-99.02:99.02
18	15699547	823058:2	T	]18:15473014]T	26	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=823058:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15473014(+)-18:15699547(-)__18_15680001_15705001D;SPAN=226533;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09
18	15730131	823155:1	A	]18:15755215]A	69	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=823155:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15730131(-)-18:15755215(+)__18_15753501_15778501D;SPAN=25084;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:10:6.3:69.3,6.3,0:0:23:-69.32:69.32
18	15743887	822954:2	A	A[18:15582223[	39	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=822954:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15582223(-)-18:15743887(+)__18_15582001_15607001D;SPAN=161664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41
18	15745704	823815:1	T	T[18:20611478[	36	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=823815:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15745704(+)-18:20611478(-)__18_20604501_20629501D;SPAN=4865774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31
18	15754745	823161:1	T	]18:20640702]T	36	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=823161:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15754745(-)-18:20640702(+)__18_15753501_15778501D;SPAN=4885957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31
18	15755215	823155:2	T	T[18:15730131[	69	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=823155:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15730131(-)-18:15755215(+)__18_15753501_15778501D;SPAN=25084;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:10:6.3:69.3,6.3,0:0:23:-69.32:69.32
18	15757733	823146:2	A	]18:15593264]A	25	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=823146:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15593264(+)-18:15757733(-)__18_15753501_15778501D;SPAN=164469;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99
18	15770472	823140:2	T	]18:15573653]T	99	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=823140:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573653(+)-18:15770472(-)__18_15753501_15778501D;SPAN=196819;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8
18	15772299	823142:2	C	C[18:15573782[	26	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=823142:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573782(-)-18:15772299(+)__18_15753501_15778501D;SPAN=198517;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	15776457	822942:2	C	]18:15577908]C	64	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=822942:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15577908(+)-18:15776457(-)__18_15557501_15582501D;SPAN=198549;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:28:5.3:64.7,0,5.3:0:22:-67.65:67.65
18	15837315	823280:1	T	]18:16263138]T	28	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=823280:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15837315(-)-18:16263138(+)__18_16243501_16268501D;SPAN=425823;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
18	16263138	823280:2	A	A[18:15837315[	28	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=823280:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15837315(-)-18:16263138(+)__18_16243501_16268501D;SPAN=425823;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37
18	17538975	823381:1	T	]18:18038741]T	59	PASS	DISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=TGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTA;MAPQ=54;MATEID=823381:2;MATENM=1;NM=0;NUMPARTS=2;REPSEQ=TGTG;SCTG=c_18_17517501_17542501_323C;SECONDARY;SPAN=499766;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:14:5.4:59.4,5.4,0:6:14:-59.41:59.41
18	17816419	823778:1	G	[18:20561646[G	33	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=823778:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:17816419(-)-18:20561646(-)__18_20555501_20580501D;SPAN=2745227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:0:11:-33.01:33.01
18	18038741	823381:2	A	A[18:17538975[	59	PASS	DISC_MAPQ=24;EVDNC=ASDIS;HOMSEQ=TGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTA;MAPQ=0;MATEID=823381:1;MATENM=0;NM=1;NUMPARTS=2;REPSEQ=TGTG;SCTG=c_18_17517501_17542501_323C;SECONDARY;SPAN=499766;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:14:5.4:59.4,5.4,0:6:14:-59.41:59.41
18	20066116	823754:1	T	T[18:20469675[	26	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=823754:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20066116(+)-18:20469675(-)__18_20457501_20482501D;SPAN=403559;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	20469675	823754:2	T	]18:20066116]T	26	PASS	DISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=823754:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20066116(+)-18:20469675(-)__18_20457501_20482501D;SPAN=403559;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	20561646	823778:2	T	[18:17816419[T	33	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=823778:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:17816419(-)-18:20561646(-)__18_20555501_20580501D;SPAN=2745227;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:9:3:33,3,0:0:11:-33.01:33.01
18	20578751	823792:1	A	A]18:20635880]	41	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=823792:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20578751(+)-18:20635880(+)__18_20555501_20580501D;SPAN=57129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:51:41.9:41.9,0,84.8:0:17:-41.78:42.64
18	20611478	823815:2	T	]18:15745704]T	36	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=823815:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15745704(+)-18:20611478(-)__18_20604501_20629501D;SPAN=4865774;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31
18	20611776	823816:1	T	T[18:20631100[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=823816:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20611776(+)-18:20631100(-)__18_20604501_20629501D;SPAN=19324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	20631100	823816:2	A	]18:20611776]A	26	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=823816:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20611776(+)-18:20631100(-)__18_20604501_20629501D;SPAN=19324;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41
18	20631485	823837:1	T	T[18:20635484[	46	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=823837:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20631485(+)-18:20635484(-)__18_20629001_20654001D;SPAN=3999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21
18	20635484	823837:2	A	]18:20631485]A	46	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=823837:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20631485(+)-18:20635484(-)__18_20629001_20654001D;SPAN=3999;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21
18	20635880	823792:2	T	T]18:20578751]	41	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=823792:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20578751(+)-18:20635880(+)__18_20555501_20580501D;SPAN=57129;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:51:41.9:41.9,0,84.8:0:17:-41.78:42.64
18	20640424	823077:2	A	]18:15691965]A	99	PASS	DISC_MAPQ=29;EVDNC=ASDIS;INSERTION=TCCCTCTTTTTATAGAATTTAAAACTGGATATATGGATAGCTCTAACTATTTCTTTATAAACGTT;MAPQ=60;MATEID=823077:1;MATENM=5;NM=6;NUMPARTS=2;SCTG=c_18_15680001_15705001_713C;SPAN=4948459;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:8:9:99,9,0:30:5:-99.02:99.02
18	20640702	823161:2	C	C[18:15754745[	36	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=823161:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15754745(-)-18:20640702(+)__18_15753501_15778501D;SPAN=4885957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31
18	20711508	823940:1	T	]18:20721332]T	52	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=823940:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20711508(-)-18:20721332(+)__18_20702501_20727501D;SPAN=9824;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:0:21:-51.89:52.86
18	20711878	823986:1	C	C[18:20735628[	66	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=823986:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20711878(+)-18:20735628(-)__18_20727001_20752001D;SPAN=23750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:15:6:66,6,0:0:22:-66.02:66.02
18	20721332	823940:2	G	G[18:20711508[	52	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=823940:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20711508(-)-18:20721332(+)__18_20702501_20727501D;SPAN=9824;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:0:21:-51.89:52.86
18	20735628	823986:2	T	]18:20711878]T	66	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=823986:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20711878(+)-18:20735628(-)__18_20727001_20752001D;SPAN=23750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:15:6:66,6,0:0:22:-66.02:66.02
18	20737933	824051:1	T	T[18:20802928[	31	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=824051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20737933(+)-18:20802928(-)__18_20800501_20825501D;SPAN=64995;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31
18	20802928	824051:2	A	]18:20737933]A	31	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=824051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20737933(+)-18:20802928(-)__18_20800501_20825501D;SPAN=64995;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31
18	22231992	824369:1	A	]18:22232842]A	19	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=824369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:22231992(-)-18:22232842(+)__18_22221501_22246501D;SPAN=850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:0:9:-19.59:21.23
18	22232842	824369:2	A	A[18:22231992[	19	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=824369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:22231992(-)-18:22232842(+)__18_22221501_22246501D;SPAN=850;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:36:19.7:19.7,0,69.2:0:9:-19.59:21.23
18	22550726	988807:1	T	[Un_KN707780v1_decoy:1[T	42	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988807:2;MATENM=0;NM=0;NUMPARTS=4;SCTG=c_631_1_5691_3C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91
18	22550726	824462:1	T	[Un_KN707780v1_decoy:1[T	75	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=824462:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_22540001_22565001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92
18	24323408	824912:1	C	C[18:24324630[	65	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTAGC;MAPQ=60;MATEID=824912:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_24304001_24329001_24C;SPAN=1222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:60:65.6:65.6,0,85.4:25:0:-65.66:65.8
18	24324630	824912:2	A	]18:24323408]A	65	PASS	EVDNC=ASSMB;HOMSEQ=AAAAATTAGC;MAPQ=60;MATEID=824912:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_24304001_24329001_24C;SPAN=1222;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:60:65.6:65.6,0,85.4:25:0:-65.66:65.8
18	27149217	825552:1	C	]18:27159058]C	30	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=825552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:27149217(-)-18:27159058(+)__18_27146001_27171001D;SPAN=9841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
18	27159058	825552:2	T	T[18:27149217[	30	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=825552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:27149217(-)-18:27159058(+)__18_27146001_27171001D;SPAN=9841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47
18	28693120	825853:1	A	A[18:28698448[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=825853:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:28693120(+)-18:28698448(-)__18_28689501_28714501D;SPAN=5328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
18	28698448	825853:2	A	]18:28693120]A	42	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=825853:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:28693120(+)-18:28698448(-)__18_28689501_28714501D;SPAN=5328;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91
18	35943975	827512:1	A	]18:36231155]A	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=827512:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36211001_36236001_21C;SPAN=287180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
18	36114704	827477:1	C	]18:36135496]C	64	PASS	EVDNC=ASSMB;INSERTION=TTCCATTTCTGGAATTCATAA;MAPQ=60;MATEID=827477:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36113001_36138001_4C;SPAN=20792;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:76:64.7:64.7,0,124.1:26:0:-64.46:65.58
18	36135496	827477:2	A	A[18:36114704[	64	PASS	EVDNC=ASSMB;INSERTION=TTCCATTTCTGGAATTCATAA;MAPQ=60;MATEID=827477:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36113001_36138001_4C;SPAN=20792;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:76:64.7:64.7,0,124.1:26:0:-64.46:65.58
18	36231155	827512:2	A	A[18:35943975[	35	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=827512:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36211001_36236001_21C;SPAN=287180;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
18	39481682	828095:1	C	C[18:39481999[	46	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATCAGATTC;MAPQ=60;MATEID=828095:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_39469501_39494501_6C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:9:4.2:46.2,4.2,0:15:0:-46.21:46.21
18	39481999	828095:2	A	]18:39481682]A	46	PASS	EVDNC=ASSMB;HOMSEQ=AAAGAATCAGATTC;MAPQ=60;MATEID=828095:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_39469501_39494501_6C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:9:4.2:46.2,4.2,0:15:0:-46.21:46.21
18	41284924	828480:1	A	A[18:41288379[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=828480:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:41284924(+)-18:41288379(-)__18_41282501_41307501D;SPAN=3455;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:5:9:99,9,0:0:33:-99.02:99.02
18	41288379	828480:2	A	]18:41284924]A	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=828480:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:41284924(+)-18:41288379(-)__18_41282501_41307501D;SPAN=3455;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:5:9:99,9,0:0:33:-99.02:99.02
18	45729261	829333:1	C	]18:45825466]C	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGTT;MAPQ=60;MATEID=829333:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_45815001_45840001_9C;SPAN=96205;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:6:5:-23.11:23.11
18	45825466	829333:2	T	T[18:45729261[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGTT;MAPQ=60;MATEID=829333:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_45815001_45840001_9C;SPAN=96205;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:6:5:-23.11:23.11
18	46441888	614599:2	G	[12:7677446[G	33	PASS	DISC_MAPQ=0;EVDNC=ASDIS;INSERTION=GGCCC;MAPQ=56;MATEID=614599:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_7668501_7693501_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:8:3:33,3,0:9:6:-33.01:33.01
18	48671984	829827:1	A	A]Un_KN707797v1_decoy:4209]	52	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=829827:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_18_48657001_48682001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81
18	50168722	830247:1	A	A[18:50172016[	49	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=830247:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:50168722(+)-18:50172016(-)__18_50151501_50176501D;SPAN=3294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:3:4.5:49.5,4.5,0:0:17:-49.51:49.51
18	50172016	830247:2	A	]18:50168722]A	49	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=830247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:50168722(+)-18:50172016(-)__18_50151501_50176501D;SPAN=3294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:3:4.5:49.5,4.5,0:0:17:-49.51:49.51
18	53679599	831138:1	A	A[18:53684205[	72	PASS	EVDNC=ASSMB;INSERTION=GAATAGGTGGCTATCTTCTAGGTGGCTAAACACCT;MAPQ=60;MATEID=831138:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_18_53655001_53680001_3C;SPAN=4606;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:24:0:-72.62:72.62
18	53684205	831138:2	A	]18:53679599]A	72	PASS	EVDNC=ASSMB;INSERTION=GAATAGGTGGCTATCTTCTAGGTGGCTAAACACCT;MAPQ=60;MATEID=831138:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_18_53655001_53680001_3C;SPAN=4606;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:4:6.6:72.6,6.6,0:24:0:-72.62:72.62
18	54415776	831595:1	G	]18:55012965]G	46	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=831595:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_55002501_55027501_1C;SPAN=597189;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
18	54426714	831418:1	G	G[18:54430589[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=831418:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54426714(+)-18:54430589(-)__18_54414501_54439501D;SPAN=3875;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:13:12.3:135.3,12.3,0:0:44:-135.3:135.3
18	54430589	831418:2	G	]18:54426714]G	99	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=831418:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54426714(+)-18:54430589(-)__18_54414501_54439501D;SPAN=3875;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:13:12.3:135.3,12.3,0:0:44:-135.3:135.3
18	54537527	831451:1	N	]18:54538399]N	95	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=831451:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54537527(-)-18:54538399(+)__18_54537001_54562001D;SPAN=872;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:25:8.7:95.7,8.7,0:0:32:-95.72:95.72
18	54538399	831451:2	A	A[18:54537527[	95	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=831451:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54537527(-)-18:54538399(+)__18_54537001_54562001D;SPAN=872;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:25:8.7:95.7,8.7,0:0:32:-95.72:95.72
18	55012965	831595:2	G	G[18:54415776[	46	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=831595:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_55002501_55027501_1C;SPAN=597189;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
18	57714342	832138:2	C	[5:176306407[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=832138:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:15:11.7:128.7,11.7,0:25:23:-128.7:128.7
18	57714588	832137:2	G	G]5:176306387]	82	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=832137:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:10:7.5:82.5,7.5,0:27:7:-82.52:82.52
18	60943836	832894:1	T	]18:61036218]T	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=832894:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_61029501_61054501_1C;SPAN=92382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:13:4.2:46.2,4.2,0:11:11:-46.21:46.21
18	61036218	832894:2	A	A[18:60943836[	46	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=832894:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_61029501_61054501_1C;SPAN=92382;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:13:4.2:46.2,4.2,0:11:11:-46.21:46.21
18	66670210	834219:1	C	]18:66682051]C	23	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=834219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_66664501_66689501_5C;SPAN=11841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
18	66682051	834219:2	T	T[18:66670210[	23	PASS	EVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=834219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_66664501_66689501_5C;SPAN=11841;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37
18	68905257	349695:2	G	[6:75321511[G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=349695:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_75313001_75338001_23C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:17:4.5:49.5,4.5,0:14:3:-49.51:49.51
18	71950157	835731:2	T	T]2:143253785]	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=835731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:143253785(+)-18:71950157(+)__18_71932001_71957001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:6:3.3:36.3,3.3,0:0:12:-36.31:36.31
18	74044264	836323:2	A	[9:125123053[A	46	PASS	DISC_MAPQ=7;EVDNC=ASDIS;INSERTION=AGATA;MAPQ=60;MATEID=836323:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_18_74039001_74064001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:7:4.2:46.2,4.2,0:12:4:-46.21:46.21
18	74044279	836324:2	C	C]9:125123230]	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=836324:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_18_74039001_74064001_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:15:6:-56.11:56.11
19	559970	838208:1	C	C[19:560561[	12	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGC;MAPQ=60;MATEID=838208:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_539001_564001_104C;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
19	560561	838208:2	G	]19:559970]G	12	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGC;MAPQ=41;MATEID=838208:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_539001_564001_104C;SPAN=591;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37
19	1181750	838461:1	A	]19:1259508]A	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=838461:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:1181750(-)-19:1259508(+)__19_1249501_1274501D;SPAN=77758;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
19	1182662	838437:1	A	A[19:1183136[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCA;MAPQ=60;MATEID=838437:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_1176001_1201001_58C;SPAN=474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:9:4:-34.76:34.76
19	1183136	838437:2	G	]19:1182662]G	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCA;MAPQ=60;MATEID=838437:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_1176001_1201001_58C;SPAN=474;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:19:11.3:34.4,0,11.3:9:4:-34.76:34.76
19	1259508	838461:2	T	T[19:1181750[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=838461:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:1181750(-)-19:1259508(+)__19_1249501_1274501D;SPAN=77758;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11
19	4511483	839493:1	G	]19:4511907]G	32	PASS	DISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=GTCAGCACGGTCTTGGCCGTGTCTACACC;MAPQ=60;MATEID=839493:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_31C;SPAN=424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:24:26.3:32.9,0,26.3:9:3:-32.89:32.89
19	4511907	839493:2	C	C[19:4511483[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTCAGCACGGTCTTGGCCGTGTCTACACC;MAPQ=60;MATEID=839493:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_31C;SPAN=424;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:24:26.3:32.9,0,26.3:9:3:-32.89:32.89
19	4512616	839494:1	T	T[19:4513083[	22	PASS	EVDNC=ASSMB;HOMSEQ=TGGTGTCCACGCCGGTCTGGATGGTTCCT;MAPQ=60;MATEID=839494:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_61C;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
19	4513083	839494:2	T	]19:4512616]T	22	PASS	EVDNC=ASSMB;HOMSEQ=TGGTGTCCACGCCGGTCTGGATGGTTCCT;MAPQ=60;MATEID=839494:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_61C;SPAN=467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
19	4618612	839527:1	G	G[19:4619569[	9	PASS	EVDNC=ASSMB;HOMSEQ=CCTCTCCTCTGTCTCTCCCTCTCCTCTG;MAPQ=60;MATEID=839527:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_4606001_4631001_42C;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:12:9.8:9.8,0,19.7:4:0:-9.831:10.03
19	4619569	839527:2	C	]19:4618612]C	9	PASS	EVDNC=ASSMB;HOMSEQ=CCTCTCCTCTGTCTCTCCCTCTCCTCTG;MAPQ=60;MATEID=839527:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_4606001_4631001_42C;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:12:9.8:9.8,0,19.7:4:0:-9.831:10.03
19	5396869	839792:1	A	]19:5397846]A	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=839792:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_5390001_5415001_78C;SPAN=977;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
19	5397846	839792:2	A	A[19:5396869[	28	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=839792:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_5390001_5415001_78C;SPAN=977;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37
19	5761464	839907:1	G	]19:5761619]G	44	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=839907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_5757501_5782501_26C;SPAN=155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:29:28.1:44.6,0,28.1:16:0:-44.86:44.86
19	5761619	839907:2	G	G[19:5761464[	44	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=839907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_5757501_5782501_26C;SPAN=155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:29:28.1:44.6,0,28.1:16:0:-44.86:44.86
19	6163211	840019:1	A	A[19:6163480[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=840019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_6149501_6174501_3C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:9:13:-56.11:56.11
19	6163480	840019:2	C	]19:6163211]C	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=840019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_6149501_6174501_3C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:9:13:-56.11:56.11
19	7153006	840455:1	A	]19:7153587]A	19	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=840455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7153006(-)-19:7153587(+)__19_7129501_7154501D;SPAN=581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
19	7153587	840455:2	T	T[19:7153006[	19	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=840455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7153006(-)-19:7153587(+)__19_7129501_7154501D;SPAN=581;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11
19	7322146	840547:1	G	[19:7322460[G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=840547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7322146(-)-19:7322460(-)__19_7301001_7326001D;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
19	7322460	840547:2	A	[19:7322146[A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=840547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7322146(-)-19:7322460(-)__19_7301001_7326001D;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41
19	8346856	841006:1	G	G[19:8349598[	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=841006:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_8330001_8355001_50C;SPAN=2742;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
19	8349598	841006:2	A	]19:8346856]A	22	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=841006:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_8330001_8355001_50C;SPAN=2742;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62
19	8473352	378412:2	T	]7:5791828]T	29	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TCGGGAGGCTGAGGCAG;MAPQ=41;MATEID=378412:1;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_7_5782001_5807001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:10:5:-29.71:29.71
19	8896565	841246:1	C	]Un_JTFH01000107v1_decoy:3383]C	19	PASS	EVDNC=ASSMB;HOMSEQ=CACCACCACCA;MAPQ=60;MATEID=841246:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_8893501_8918501_84C;SPAN=-1;SUBN=4;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89
19	8896582	994908:1	T	T]Un_JTFH01000017v1_decoy:7832]	33	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=994908:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_860_1_7832_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:2:3:33,3,0:11:0:-33.01:33.01
19	9112286	841364:1	C	C[19:9114446[	20	PASS	EVDNC=ASSMB;HOMSEQ=CATGCCTGTAATCCCAGC;MAPQ=60;MATEID=841364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_9114001_9139001_114C;SPAN=2160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:9:0.8:20.6,0,0.8:7:0:-21.46:21.46
19	9114446	841364:2	C	]19:9112286]C	20	PASS	EVDNC=ASSMB;HOMSEQ=CATGCCTGTAATCCCAGC;MAPQ=60;MATEID=841364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_9114001_9139001_114C;SPAN=2160;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:9:0.8:20.6,0,0.8:7:0:-21.46:21.46
19	9167128	463125:2	T	]8:93654319]T	62	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=463125:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93654319(+)-19:9167128(-)__8_93639001_93664001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:0:21:-62.72:62.72
19	10890365	841999:1	T	]19:10986999]T	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=841999:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_10976001_11001001_62C;SPAN=96634;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
19	10986999	841999:2	T	T[19:10890365[	32	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=841999:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_10976001_11001001_62C;SPAN=96634;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15
19	12445946	842403:1	G	G[19:12447413[	36	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=842403:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_19_12446001_12471001_17C;SPAN=1467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:0:3.3:36.3,3.3,0:0:12:-36.31:36.31
19	12447413	842403:2	G	]19:12445946]G	36	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=842403:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_19_12446001_12471001_17C;SPAN=1467;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:0:3.3:36.3,3.3,0:0:12:-36.31:36.31
19	12584070	842464:1	A	A[19:12588117[	52	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCCCA;MAPQ=60;MATEID=842464:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_12568501_12593501_6C;SPAN=4047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	12588117	842464:2	G	]19:12584070]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCCCA;MAPQ=60;MATEID=842464:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_12568501_12593501_6C;SPAN=4047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	12677341	842528:1	A	]19:12816052]A	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=842528:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:12677341(-)-19:12816052(+)__19_12813501_12838501D;SPAN=138711;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:0:13:-39.61:39.61
19	12816052	842528:2	C	C[19:12677341[	39	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=842528:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:12677341(-)-19:12816052(+)__19_12813501_12838501D;SPAN=138711;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:13:3.6:39.6,3.6,0:0:13:-39.61:39.61
19	13737615	842826:2	T	[6:147050431[T	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTGGCTAATTTTTGTATTTTTAGTAGAGA;INSERTION=AAGCCACCGTGTCCCGCCAGCATCCACCTGC;MAPQ=60;MATEID=842826:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_19_13720001_13745001_137C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:38:14:10.5:115.5,10.5,0:37:7:-115.5:115.5
19	14621596	843081:1	T	T[19:14623316[	15	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=843081:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:14621596(+)-19:14623316(-)__19_14602001_14627001D;SPAN=1720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:52:15.2:15.2,0,114.2:0:9:-15.09:19.61
19	14623316	843081:2	A	]19:14621596]A	15	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=843081:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:14621596(+)-19:14623316(-)__19_14602001_14627001D;SPAN=1720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:52:15.2:15.2,0,114.2:0:9:-15.09:19.61
19	14935580	843247:1	T	T[19:14938666[	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=843247:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_14920501_14945501_102C;SPAN=3086;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:11:0:-29.57:29.57
19	14938666	843247:2	T	]19:14935580]T	29	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=843247:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_14920501_14945501_102C;SPAN=3086;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:24:29.6:29.6,0,29.6:11:0:-29.57:29.57
19	15675292	843627:1	T	[19:15777541[T	85	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TGTCCACAGGTGCACAGGAGGCACTAGCACAGAACCTGGCATAAG;MAPQ=60;MATEID=843627:2;MATENM=3;NM=14;NUMPARTS=2;SCTG=c_19_15753501_15778501_69C;SPAN=102249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:18:7.8:85.8,7.8,0:14:15:-85.82:85.82
19	15777541	843627:2	C	[19:15675292[C	85	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TGTCCACAGGTGCACAGGAGGCACTAGCACAGAACCTGGCATAAG;MAPQ=60;MATEID=843627:1;MATENM=14;NM=3;NUMPARTS=2;SCTG=c_19_15753501_15778501_69C;SPAN=102249;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:18:7.8:85.8,7.8,0:14:15:-85.82:85.82
19	16256431	843938:1	C	]19:16256542]C	83	PASS	EVDNC=ASSMB;INSERTION=CTGATTAGCTGGGATCGCAGGCACATGTG;MAPQ=60;MATEID=843938:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_16243501_16268501_91C;SPAN=111;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:42:21.2:83.9,0,21.2:29:0:-85.96:85.96
19	16256542	843938:2	C	C[19:16256431[	83	PASS	EVDNC=ASSMB;INSERTION=CTGATTAGCTGGGATCGCAGGCACATGTG;MAPQ=60;MATEID=843938:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_16243501_16268501_91C;SPAN=111;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:42:21.2:83.9,0,21.2:29:0:-85.96:85.96
19	17722273	844421:1	G	]19:17722440]G	27	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=844421:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_17713501_17738501_70C;SPAN=167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
19	17722440	844421:2	A	A[19:17722273[	27	PASS	EVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=844421:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_17713501_17738501_70C;SPAN=167;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16
19	17745327	844424:1	T	T[19:17745972[	42	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AAAAATTAGCTGGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACT;MAPQ=60;MATEID=844424:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_19_17738001_17763001_74C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:11:3.9:42.9,3.9,0:7:8:-42.91:42.91
19	17745972	844424:2	A	]19:17745327]A	42	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AAAAATTAGCTGGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACT;MAPQ=60;MATEID=844424:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_19_17738001_17763001_74C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:11:3.9:42.9,3.9,0:7:8:-42.91:42.91
19	18052042	844540:1	G	]19:18069225]G	12	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=844540:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_18056501_18081501_131C;SPAN=17183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:15:12.2:12.2,0,25.4:4:2:-12.29:12.54
19	18069225	844540:2	G	G[19:18052042[	12	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=844540:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_18056501_18081501_131C;SPAN=17183;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:15:12.2:12.2,0,25.4:4:2:-12.29:12.54
19	19147213	844918:1	A	A[19:19147484[	47	PASS	EVDNC=ASSMB;HOMSEQ=AGGA;MAPQ=60;MATEID=844918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_19134501_19159501_81C;SPAN=271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
19	19147484	844918:2	A	]19:19147213]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AGGA;MAPQ=60;MATEID=844918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_19134501_19159501_81C;SPAN=271;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48
19	20065920	845168:1	T	T[19:20066218[	69	PASS	EVDNC=ASSMB;HOMSEQ=TCAATCTATTCCT;MAPQ=60;MATEID=845168:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_20065501_20090501_12C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
19	20066218	845168:2	T	]19:20065920]T	69	PASS	EVDNC=ASSMB;HOMSEQ=TCAATCTATTCCT;MAPQ=60;MATEID=845168:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_20065501_20090501_12C;SPAN=298;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32
19	20618462	845443:1	A	A]19:20701122]	26	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=845443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20618462(+)-19:20701122(+)__19_20678001_20703001D;SPAN=82660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
19	20619278	845444:1	G	[19:20700182[G	59	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=845444:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20619278(-)-19:20700182(-)__19_20678001_20703001D;SPAN=80904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34
19	20700182	845444:2	T	[19:20619278[T	59	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=845444:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20619278(-)-19:20700182(-)__19_20678001_20703001D;SPAN=80904;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34
19	20701122	845443:2	T	T]19:20618462]	26	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=845443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20618462(+)-19:20701122(+)__19_20678001_20703001D;SPAN=82660;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32
19	21089889	845809:1	A	]19:21151960]A	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATTTGTACACTTTTGCCAGCATGCCAGGCTTCTGGG;MAPQ=60;MATEID=845809:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_21143501_21168501_7C;SPAN=62071;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:10:2:-33.15:33.15
19	21136664	845806:1	T	T[19:21136820[	20	PASS	EVDNC=ASSMB;HOMSEQ=AGAAT;MAPQ=60;MATEID=845806:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_21119001_21144001_97C;SPAN=156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
19	21136820	845806:2	A	]19:21136664]A	20	PASS	EVDNC=ASSMB;HOMSEQ=AGAAT;MAPQ=60;MATEID=845806:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_21119001_21144001_97C;SPAN=156;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65
19	21151960	845809:2	G	G[19:21089889[	32	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATTTGTACACTTTTGCCAGCATGCCAGGCTTCTGGG;MAPQ=60;MATEID=845809:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_21143501_21168501_7C;SPAN=62071;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:15:5.6:32,0,5.6:10:2:-33.15:33.15
19	21720254	846251:1	T	T[19:21722766[	23	PASS	EVDNC=ASSMB;HOMSEQ=TGTTAT;MAPQ=60;MATEID=846251:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_21707001_21732001_71C;SPAN=2512;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59
19	21722766	846251:2	T	]19:21720254]T	23	PASS	EVDNC=ASSMB;HOMSEQ=TGTTAT;MAPQ=60;MATEID=846251:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_21707001_21732001_71C;SPAN=2512;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59
19	22958074	846898:1	C	C[19:22960117[	46	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=846898:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:22958074(+)-19:22960117(-)__19_22956501_22981501D;SPAN=2043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:1:4.2:46.2,4.2,0:0:16:-46.21:46.21
19	22960117	846898:2	C	]19:22958074]C	46	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=846898:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:22958074(+)-19:22960117(-)__19_22956501_22981501D;SPAN=2043;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:1:4.2:46.2,4.2,0:0:16:-46.21:46.21
19	23379925	847308:1	A	A]19:23799606]	26	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=847308:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23379925(+)-19:23799606(+)__19_23789501_23814501D;SPAN=419681;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
19	23622991	847128:1	C	C[19:23625506[	66	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GGGTTCAAGCAATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=847128:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_23618001_23643001_15C;SPAN=2515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:6:6:66,6,0:13:14:-66.02:66.02
19	23625506	847128:2	G	]19:23622991]G	66	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=GGGTTCAAGCAATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=847128:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_23618001_23643001_15C;SPAN=2515;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:6:6:66,6,0:13:14:-66.02:66.02
19	23753137	847263:1	G	]19:23753636]G	91	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=847263:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_23740501_23765501_17C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:39:5.6:91.4,0,5.6:22:16:-95.68:95.68
19	23753636	847263:2	G	G[19:23753137[	91	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=847263:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_23740501_23765501_17C;SPAN=499;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:39:5.6:91.4,0,5.6:22:16:-95.68:95.68
19	23799606	847308:2	A	A]19:23379925]	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=847308:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23379925(+)-19:23799606(+)__19_23789501_23814501D;SPAN=419681;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41
19	23845125	847363:2	C	C]1:28189261]	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=847363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:28189261(+)-19:23845125(+)__19_23838501_23863501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
19	23872785	847437:1	T	T[19:23967785[	44	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=847437:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23872785(+)-19:23967785(-)__19_23961001_23986001D;SPAN=95000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:0:15:-45.49:45.49
19	23873150	847438:1	A	]19:23968297]A	75	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=847438:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23873150(-)-19:23968297(+)__19_23961001_23986001D;SPAN=95147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:17:6.9:75.9,6.9,0:0:25:-75.92:75.92
19	23967785	847437:2	G	]19:23872785]G	44	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=847437:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23872785(+)-19:23967785(-)__19_23961001_23986001D;SPAN=95000;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:20:4.4:44,0,4.4:0:15:-45.49:45.49
19	23968297	847438:2	A	A[19:23873150[	75	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=847438:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23873150(-)-19:23968297(+)__19_23961001_23986001D;SPAN=95147;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:17:6.9:75.9,6.9,0:0:25:-75.92:75.92
19	24358987	847575:1	T	T[19:24359111[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCATTGAGGCCTATGGTGAAAAAGGAAATATCT;MAPQ=60;MATEID=847575:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_24353001_24378001_44C;SPAN=124;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:46:13.7:99.5,0,13.7:29:5:-102.7:102.7
19	24359111	847575:2	G	]19:24358987]G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCATTGAGGCCTATGGTGAAAAAGGAAATATCT;MAPQ=60;MATEID=847575:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_24353001_24378001_44C;SPAN=124;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:46:13.7:99.5,0,13.7:29:5:-102.7:102.7
19	24895890	847832:1	N	]19:24896879]N	16	PASS	DISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=847832:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24895890(-)-19:24896879(+)__19_24892001_24917001D;SPAN=989;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:47:16.7:16.7,0,99.2:0:9:-16.5:20.04
19	24896321	847840:1	A	]19:24897433]A	10	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=847840:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896321(-)-19:24897433(+)__19_24892001_24917001D;SPAN=1112;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:150:10.6:10.6,0,367.1:0:16:-10.65:31.23
19	24896648	847842:1	C	C[19:24897605[	6	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=847842:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896648(+)-19:24897605(-)__19_24892001_24917001D;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:129:6.8:6.8,0,317:0:13:-6.652:25.03
19	24896879	847832:2	G	G[19:24895890[	16	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=847832:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24895890(-)-19:24896879(+)__19_24892001_24917001D;SPAN=989;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:47:16.7:16.7,0,99.2:0:9:-16.5:20.04
19	24896904	847754:2	A	A[5:47172599[	41	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=847754:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:47172599(-)-19:24896904(+)__19_24892001_24917001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:54:41:41,0,93.8:0:17:-40.94:42.13
19	24897340	847848:1	T	]19:27249403]T	99	PASS	DISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=TTCCTTTAGACAGAGCAGATTTGAAACACTCTTTTTGTGGAATTTG;MAPQ=60;MATEID=847848:2;MATENM=12;NM=1;NUMPARTS=2;SCTG=c_19_24892001_24917001_37C;SPAN=2352063;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:90:53.9:172.7,0,53.9:52:10:-176.2:176.2
19	24897433	847840:2	A	A[19:24896321[	10	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=847840:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896321(-)-19:24897433(+)__19_24892001_24917001D;SPAN=1112;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:150:10.6:10.6,0,367.1:0:16:-10.65:31.23
19	24897605	847842:2	T	]19:24896648]T	6	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=847842:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896648(+)-19:24897605(-)__19_24892001_24917001D;SPAN=957;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:129:6.8:6.8,0,317:0:13:-6.652:25.03
19	27240874	847883:2	N	]16:36353193]N	26	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=847883:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36353193(+)-19:27240874(-)__19_27219501_27244501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
19	27249403	847848:2	G	G[19:24897340[	99	PASS	DISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=TTCCTTTAGACAGAGCAGATTTGAAACACTCTTTTTGTGGAATTTG;MAPQ=60;MATEID=847848:1;MATENM=1;NM=12;NUMPARTS=2;SCTG=c_19_24892001_24917001_37C;SPAN=2352063;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:90:53.9:172.7,0,53.9:52:10:-176.2:176.2
19	27310510	848031:1	A	]19:27315694]A	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AGTTGAACCTATCTTTTGATAGAGCAGTTTTGAAACTCTCTTTTTGTAGAATCTCCAAGTGGATA;MAPQ=60;MATEID=848031:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_27293001_27318001_61C;SPAN=5184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:36:10.2:112.2,10.2,0:22:18:-112.2:112.2
19	27315694	848031:2	A	A[19:27310510[	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGTTGAACCTATCTTTTGATAGAGCAGTTTTGAAACTCTCTTTTTGTAGAATCTCCAAGTGGATA;MAPQ=60;MATEID=848031:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_27293001_27318001_61C;SPAN=5184;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:37:36:10.2:112.2,10.2,0:22:18:-112.2:112.2
19	27339321	848102:1	T	]19:27339693]T	33	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=TTTCCAAACTTCTCAATCAAAAGAAAGGTTC;MAPQ=60;MATEID=848102:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_19_27317501_27342501_13C;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:139:33.8:33.8,0,314.3:22:2:-33.55:46.99
19	27339693	848102:2	C	C[19:27339321[	33	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCCAAACTTCTCAATCAAAAGAAAGGTTC;MAPQ=60;MATEID=848102:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_19_27317501_27342501_13C;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:139:33.8:33.8,0,314.3:22:2:-33.55:46.99
19	27363523	848281:1	G	G[19:27397934[	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCCTTTTTCACCATAG;MAPQ=60;MATEID=848281:2;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_19_27342001_27367001_569C;SPAN=34411;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:55:47:15.3:168.3,15.3,0:39:19:-168.3:168.3
19	27365941	876115:1	T	[20:30926139[T	68	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCATATTCTACAGAAAGACTGTTTCCAAA;MAPQ=60;MATEID=876115:2;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=TT;SCTG=c_20_30919001_30944001_257C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:98:68.3:68.3,0,177.2:26:4:-68.18:70.92
19	27377200	848414:1	G	G[19:27377491[	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAACTTCCTTG;MAPQ=60;MATEID=848414:2;MATENM=3;NM=10;NUMPARTS=2;SCTG=c_19_27366501_27391501_648C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:79:83.6:113.3,0,83.6:18:23:-113.3:113.3
19	27377491	848414:2	G	]19:27377200]G	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAACTTCCTTG;MAPQ=60;MATEID=848414:1;MATENM=10;NM=3;NUMPARTS=2;SCTG=c_19_27366501_27391501_648C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:41:79:83.6:113.3,0,83.6:18:23:-113.3:113.3
19	27388979	848453:1	T	T[19:27389239[	6	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=848453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_27366501_27391501_76C;SPAN=260;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:96:6.2:6.2,0,233.9:10:0:-6.025:19.41
19	27389239	848453:2	T	]19:27388979]T	6	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=848453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_27366501_27391501_76C;SPAN=260;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:96:6.2:6.2,0,233.9:10:0:-6.025:19.41
19	27390865	848460:1	G	G[19:27391462[	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=ATATTTGGAGCGCTTTGAGGTCTATGGTGAAAAAGGAACTATCTTCACATTAAACCTAGACAGAATGATTCTGAGAAACTTCTTTG;MAPQ=60;MATEID=848460:2;MATENM=9;NM=8;NUMPARTS=2;SCTG=c_19_27366501_27391501_740C;SPAN=597;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:65:48:18:198,18,0:21:49:-198:198
19	27391462	848460:2	A	]19:27390865]A	99	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=ATATTTGGAGCGCTTTGAGGTCTATGGTGAAAAAGGAACTATCTTCACATTAAACCTAGACAGAATGATTCTGAGAAACTTCTTTG;MAPQ=60;MATEID=848460:1;MATENM=8;NM=9;NUMPARTS=2;SCTG=c_19_27366501_27391501_740C;SPAN=597;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:65:48:18:198,18,0:21:49:-198:198
19	27397934	848281:2	A	]19:27363523]A	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCCTTTTTCACCATAG;MAPQ=60;MATEID=848281:1;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_19_27342001_27367001_569C;SPAN=34411;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:55:47:15.3:168.3,15.3,0:39:19:-168.3:168.3
19	27470475	848602:1	A	A[19:27472339[	82	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTACACCATAGGCCTCA;MAPQ=60;MATEID=848602:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_27464501_27489501_4C;SPAN=1864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:12:7.5:82.5,7.5,0:27:0:-82.52:82.52
19	27472339	848602:2	C	]19:27470475]C	82	PASS	EVDNC=ASSMB;HOMSEQ=CTTTTACACCATAGGCCTCA;MAPQ=60;MATEID=848602:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_27464501_27489501_4C;SPAN=1864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:12:7.5:82.5,7.5,0:27:0:-82.52:82.52
19	29459396	849209:1	T	T[19:29465260[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=849209:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:29459396(+)-19:29465260(-)__19_29449001_29474001D;SPAN=5864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91
19	29465260	849209:2	A	]19:29459396]A	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=849209:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:29459396(+)-19:29465260(-)__19_29449001_29474001D;SPAN=5864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91
19	29897897	849377:1	T	T[19:29902194[	79	PASS	EVDNC=ASSMB;HOMSEQ=TAATTTTTATTTTT;MAPQ=60;MATEID=849377:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_29890001_29915001_36C;SPAN=4297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:24:0:-78.56:78.56
19	29902194	849377:2	T	]19:29897897]T	79	PASS	EVDNC=ASSMB;HOMSEQ=TAATTTTTATTTTT;MAPQ=60;MATEID=849377:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_29890001_29915001_36C;SPAN=4297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:24:0:-78.56:78.56
19	30526433	849550:1	C	C[19:30526744[	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAC;MAPQ=60;MATEID=849550:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_30502501_30527501_43C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
19	30526744	849550:2	A	]19:30526433]A	58	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAC;MAPQ=60;MATEID=849550:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_30502501_30527501_43C;SPAN=311;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44
19	32019277	669546:2	A	A[13:49318685[	49	PASS	DISC_MAPQ=7;EVDNC=ASDIS;MAPQ=60;MATEID=669546:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_49294001_49319001_26C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:14:5:-49.51:49.51
19	32596050	850106:1	C	]19:32596653]C	36	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=850106:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:32596050(-)-19:32596653(+)__19_32585001_32610001D;SPAN=603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05
19	32596653	850106:2	A	A[19:32596050[	36	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=850106:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:32596050(-)-19:32596653(+)__19_32585001_32610001D;SPAN=603;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05
19	33249724	850374:1	A	]19:33250465]A	63	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=850374:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:33249724(-)-19:33250465(+)__19_33246501_33271501D;SPAN=741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:44:47:63.5,0,47:0:23:-63.68:63.68
19	33250465	850374:2	C	C[19:33249724[	63	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=850374:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:33249724(-)-19:33250465(+)__19_33246501_33271501D;SPAN=741;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:44:47:63.5,0,47:0:23:-63.68:63.68
19	34392184	850796:1	T	]Un_KN707807v1_decoy:4616]T	44	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=850796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_34373501_34398501_126C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85
19	36555293	851508:1	T	T[19:36555596[	52	PASS	EVDNC=ASSMB;HOMSEQ=GCGATAAAGTTTTT;MAPQ=60;MATEID=851508:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_36554001_36579001_38C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	36555596	851508:2	G	]19:36555293]G	52	PASS	EVDNC=ASSMB;HOMSEQ=GCGATAAAGTTTTT;MAPQ=60;MATEID=851508:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_36554001_36579001_38C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	38146650	852018:1	C	]19:38163477]C	45	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CAGAGTG;MAPQ=60;MATEID=852018:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_38146501_38171501_2C;SPAN=16827;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:27:22.1:45.2,0,22.1:11:12:-45.63:45.63
19	38163477	852018:2	G	G[19:38146650[	45	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAGTG;MAPQ=60;MATEID=852018:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_38146501_38171501_2C;SPAN=16827;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:27:22.1:45.2,0,22.1:11:12:-45.63:45.63
19	39766920	852503:1	T	T[19:39767211[	18	PASS	EVDNC=ASSMB;HOMSEQ=GCATCAGCGATATTTT;MAPQ=60;MATEID=852503:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_39763501_39788501_48C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:16:18.8:18.8,0,18.8:7:0:-18.61:18.62
19	39767211	852503:2	G	]19:39766920]G	18	PASS	EVDNC=ASSMB;HOMSEQ=GCATCAGCGATATTTT;MAPQ=60;MATEID=852503:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_39763501_39788501_48C;SPAN=291;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:16:18.8:18.8,0,18.8:7:0:-18.61:18.62
19	40107197	852673:1	T	T[19:40109854[	40	PASS	EVDNC=ASSMB;HOMSEQ=CCAATTAATAGTTTT;MAPQ=60;MATEID=852673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_40106501_40131501_40C;SPAN=2657;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98
19	40109854	852673:2	C	]19:40107197]C	40	PASS	EVDNC=ASSMB;HOMSEQ=CCAATTAATAGTTTT;MAPQ=60;MATEID=852673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_40106501_40131501_40C;SPAN=2657;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98
19	41102820	852998:1	C	C[19:41104286[	47	PASS	EVDNC=ASSMB;HOMSEQ=AGAAAACCCCAACATCTC;MAPQ=60;MATEID=852998:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_41086501_41111501_76C;SPAN=1466;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
19	41104286	852998:2	A	]19:41102820]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AGAAAACCCCAACATCTC;MAPQ=60;MATEID=852998:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_41086501_41111501_76C;SPAN=1466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75
19	41643872	853216:1	G	G[19:41646305[	72	PASS	EVDNC=ASSMB;HOMSEQ=AAGATATAAGATTAG;MAPQ=60;MATEID=853216:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_41625501_41650501_37C;SPAN=2433;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:24:0:-72.62:72.62
19	41646305	853216:2	A	]19:41643872]A	72	PASS	EVDNC=ASSMB;HOMSEQ=AAGATATAAGATTAG;MAPQ=60;MATEID=853216:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_41625501_41650501_37C;SPAN=2433;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:15:6.6:72.6,6.6,0:24:0:-72.62:72.62
19	41803700	853279:1	T	T[19:41807214[	47	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=853279:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_41797001_41822001_21C;SPAN=3514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96
19	41803763	853281:1	G	]19:41807383]G	69	PASS	EVDNC=ASSMB;INSERTION=CCCA;MAPQ=60;MATEID=853281:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_4C;SPAN=3620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56
19	41807214	853279:2	C	]19:41803700]C	47	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=853279:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_21C;SPAN=3514;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96
19	41807383	853281:2	G	G[19:41803763[	69	PASS	EVDNC=ASSMB;INSERTION=CCCA;MAPQ=60;MATEID=853281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_4C;SPAN=3620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56
19	43679334	853729:1	T	]19:43679927]T	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TGGTGG;MAPQ=60;MATEID=853729:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_19_43659001_43684001_3C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:63:22.1:134.3,0,22.1:35:23:-138.4:138.4
19	43679927	853729:2	G	G[19:43679334[	99	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGGTGG;MAPQ=60;MATEID=853729:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_19_43659001_43684001_3C;SPAN=593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:63:22.1:134.3,0,22.1:35:23:-138.4:138.4
19	44546246	854019:1	T	T[19:44546891[	56	PASS	EVDNC=ASSMB;HOMSEQ=GGTGGCATATAATATTTTT;MAPQ=60;MATEID=854019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_44541001_44566001_22C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:70:56.3:56.3,0,119:23:0:-56.25:57.52
19	44546891	854019:2	G	]19:44546246]G	56	PASS	EVDNC=ASSMB;HOMSEQ=GGTGGCATATAATATTTTT;MAPQ=60;MATEID=854019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_44541001_44566001_22C;SPAN=645;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:70:56.3:56.3,0,119:23:0:-56.25:57.52
19	45635085	854386:1	A	A[19:45635362[	35	PASS	EVDNC=ASSMB;HOMSEQ=CTCCTGACCTCA;MAPQ=60;MATEID=854386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_45619001_45644001_40C;SPAN=277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
19	45635362	854386:2	C	]19:45635085]C	35	PASS	EVDNC=ASSMB;HOMSEQ=CTCCTGACCTCA;MAPQ=60;MATEID=854386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_45619001_45644001_40C;SPAN=277;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11
19	46275906	854976:1	G	[19:47396150[G	23	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=854976:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:46275906(-)-19:47396150(-)__19_47383001_47408001D;SPAN=1120244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
19	47025044	854871:1	C	C[19:47025446[	82	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTC;MAPQ=60;MATEID=854871:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_47015501_47040501_6C;SPAN=402;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:5:7.5:82.5,7.5,0:15:18:-82.52:82.52
19	47025446	854871:2	T	]19:47025044]T	82	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTC;MAPQ=60;MATEID=854871:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_47015501_47040501_6C;SPAN=402;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:5:7.5:82.5,7.5,0:15:18:-82.52:82.52
19	47396150	854976:2	A	[19:46275906[A	23	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=854976:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:46275906(-)-19:47396150(-)__19_47383001_47408001D;SPAN=1120244;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
19	47419531	996298:1	T	]Un_JTFH01000178v1_decoy:2767]T	49	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=996298:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1021_1_2767_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51
19	49078709	855632:1	T	T[19:49079002[	52	PASS	EVDNC=ASSMB;HOMSEQ=TATTTTATTTATTT;MAPQ=60;MATEID=855632:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_49073501_49098501_54C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	49079002	855632:2	T	]19:49078709]T	52	PASS	EVDNC=ASSMB;HOMSEQ=TATTTTATTTATTT;MAPQ=60;MATEID=855632:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_49073501_49098501_54C;SPAN=293;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81
19	50574634	856125:1	T	T[19:50579255[	27	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=856125:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_50568001_50593001_52C;SPAN=4621;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
19	50579255	856125:2	C	]19:50574634]C	27	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=856125:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_50568001_50593001_52C;SPAN=4621;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
19	50901191	856299:1	C	]19:50982831]C	23	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAG;MAPQ=60;MATEID=856299:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_50960001_50985001_105C;SPAN=81640;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:8:0:-23.11:23.11
19	50903593	856267:1	T	T[19:50905076[	72	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAGTAGCTGGGATTACAGGCACCTGCCACTATGCCTGGCTAATTTTGGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCT;MAPQ=60;MATEID=856267:2;MATENM=0;NM=34;NUMPARTS=2;SCTG=c_19_50886501_50911501_46C;SPAN=1483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:12:6.6:72.6,6.6,0:6:20:-72.62:72.62
19	50905076	856267:2	G	]19:50903593]G	72	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGTAGCTGGGATTACAGGCACCTGCCACTATGCCTGGCTAATTTTGGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCT;MAPQ=60;MATEID=856267:1;MATENM=34;NM=0;NUMPARTS=2;SCTG=c_19_50886501_50911501_46C;SPAN=1483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:12:6.6:72.6,6.6,0:6:20:-72.62:72.62
19	50982831	856299:2	G	G[19:50901191[	23	PASS	EVDNC=ASSMB;HOMSEQ=CCTCAG;MAPQ=60;MATEID=856299:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_50960001_50985001_105C;SPAN=81640;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:8:0:-23.11:23.11
19	51273153	856400:1	T	T[19:51273448[	20	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTACCACAACTT;MAPQ=60;MATEID=856400:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_51254001_51279001_69C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
19	51273448	856400:2	A	]19:51273153]A	20	PASS	EVDNC=ASSMB;HOMSEQ=AAGAATTACCACAACTT;MAPQ=60;MATEID=856400:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_51254001_51279001_69C;SPAN=295;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87
19	51672799	856558:1	G	G[19:51674260[	99	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=856558:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:51672799(+)-19:51674260(-)__19_51670501_51695501D;SPAN=1461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6
19	51674260	856558:2	A	]19:51672799]A	99	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=856558:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:51672799(+)-19:51674260(-)__19_51670501_51695501D;SPAN=1461;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6
19	51825382	856668:1	T	[19:52243049[T	11	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=856668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_52234001_52259001_18C;SPAN=417667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:17:11.9:11.9,0,28.4:2:3:-11.73:12.21
19	52243049	856668:2	G	[19:51825382[G	11	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=856668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_52234001_52259001_18C;SPAN=417667;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:17:11.9:11.9,0,28.4:2:3:-11.73:12.21
19	52350629	856711:1	G	G[19:52350932[	24	PASS	EVDNC=ASSMB;HOMSEQ=GGAGGCTGCAGTGAGCCAAG;MAPQ=60;MATEID=856711:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_52332001_52357001_48C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:43:24.2:24.2,0,83.6:11:0:-24.22:26.08
19	52350932	856711:2	G	]19:52350629]G	24	PASS	EVDNC=ASSMB;HOMSEQ=GGAGGCTGCAGTGAGCCAAG;MAPQ=60;MATEID=856711:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_52332001_52357001_48C;SPAN=303;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:43:24.2:24.2,0,83.6:11:0:-24.22:26.08
19	52592887	856849:1	A	A[19:52594355[	82	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=856849:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:52592887(+)-19:52594355(-)__19_52577001_52602001D;SPAN=1468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:7:7.5:82.5,7.5,0:0:27:-82.52:82.52
19	52594355	856849:2	A	]19:52592887]A	82	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=856849:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:52592887(+)-19:52594355(-)__19_52577001_52602001D;SPAN=1468;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:7:7.5:82.5,7.5,0:0:27:-82.52:82.52
19	52918961	857052:1	T	T[19:52920955[	19	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAAAAATCT;MAPQ=60;MATEID=857052:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_52920001_52945001_46C;SPAN=1994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:73:19.1:19.1,0,164.3:12:0:-19.09:25.85
19	52920955	857052:2	A	]19:52918961]A	19	PASS	EVDNC=ASSMB;HOMSEQ=AAAAAAAAAAAAAATCT;MAPQ=60;MATEID=857052:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_52920001_52945001_46C;SPAN=1994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:73:19.1:19.1,0,164.3:12:0:-19.09:25.85
19	53185924	857218:1	T	T[19:53188699[	83	PASS	EVDNC=ASSMB;HOMSEQ=GGGTTTTT;MAPQ=60;MATEID=857218:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_53165001_53190001_68C;SPAN=2775;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92
19	53188699	857218:2	G	]19:53185924]G	83	PASS	EVDNC=ASSMB;HOMSEQ=GGGTTTTT;MAPQ=60;MATEID=857218:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_53165001_53190001_68C;SPAN=2775;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92
19	53433460	857385:1	C	C[19:53470214[	73	PASS	EVDNC=ASSMB;HOMSEQ=TGTCTGGAGCCCATTTCTTTGGCTTCGACTTCGC;MAPQ=60;MATEID=857385:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_19_53459001_53484001_53C;SPAN=36754;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:33:7.4:73.4,0,7.4:25:0:-76.04:76.04
19	53442835	857387:1	G	]19:53480335]G	28	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=857387:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:53442835(-)-19:53480335(+)__19_53459001_53484001D;SPAN=37500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
19	53470214	857385:2	T	]19:53433460]T	73	PASS	EVDNC=ASSMB;HOMSEQ=TGTCTGGAGCCCATTTCTTTGGCTTCGACTTCGC;MAPQ=60;MATEID=857385:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_19_53459001_53484001_53C;SPAN=36754;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:25:33:7.4:73.4,0,7.4:25:0:-76.04:76.04
19	53480335	857387:2	T	T[19:53442835[	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=857387:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:53442835(-)-19:53480335(+)__19_53459001_53484001D;SPAN=37500;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
19	54052300	857659:1	A	A[19:54057389[	56	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTACTCCCAGCTACTTGGGAGGCTGA;MAPQ=60;MATEID=857659:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_19_54047001_54072001_22C;SPAN=5089;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
19	54057389	857659:2	C	]19:54052300]C	56	PASS	EVDNC=ASSMB;HOMSEQ=CCTGTACTCCCAGCTACTTGGGAGGCTGA;MAPQ=60;MATEID=857659:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_19_54047001_54072001_22C;SPAN=5089;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11
19	54964364	858158:1	C	]19:54965577]C	20	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=858158:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:54964364(-)-19:54965577(+)__19_54953501_54978501D;SPAN=1213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
19	54965577	858158:2	T	T[19:54964364[	20	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=858158:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:54964364(-)-19:54965577(+)__19_54953501_54978501D;SPAN=1213;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77
19	56963539	859228:1	G	G[19:56964242[	75	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=859228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_56962501_56987501_14C;SPAN=703;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92
19	56964242	859228:2	A	]19:56963539]A	75	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=859228:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_56962501_56987501_14C;SPAN=703;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92
19	57824097	859732:1	T	T]19:58014702]	33	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=859732:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:57824097(+)-19:58014702(+)__19_57991501_58016501D;SPAN=190605;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:6:3:33,3,0:0:11:-33.01:33.01
19	58014702	859732:2	G	G]19:57824097]	33	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=859732:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:57824097(+)-19:58014702(+)__19_57991501_58016501D;SPAN=190605;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:6:3:33,3,0:0:11:-33.01:33.01
19	58106421	859805:1	G	G[19:58106734[	89	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAAAAAAAGACATCTG;MAPQ=60;MATEID=859805:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_58089501_58114501_22C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:12:8.1:89.1,8.1,0:17:14:-89.12:89.12
19	58106734	859805:2	A	]19:58106421]A	89	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAGAAAAAAAGACATCTG;MAPQ=60;MATEID=859805:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_58089501_58114501_22C;SPAN=313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:12:8.1:89.1,8.1,0:17:14:-89.12:89.12
20	1408603	860540:1	T	T[20:1410170[	42	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=860540:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:1408603(+)-20:1410170(-)__20_1396501_1421501D;SPAN=1567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:0:14:-42.91:42.91
20	1410170	860540:2	A	]20:1408603]A	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=860540:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:1408603(+)-20:1410170(-)__20_1396501_1421501D;SPAN=1567;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:0:14:-42.91:42.91
20	2379056	860744:1	C	]20:2379968]C	92	PASS	DISC_MAPQ=51;EVDNC=ASDIS;INSERTION=TGAGG;MAPQ=60;MATEID=860744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2376501_2401501_11C;SPAN=912;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:31:8.4:92.4,8.4,0:22:20:-92.42:92.42
20	2379968	860744:2	G	G[20:2379056[	92	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAGG;MAPQ=60;MATEID=860744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2376501_2401501_11C;SPAN=912;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:31:8.4:92.4,8.4,0:22:20:-92.42:92.42
20	2822516	860836:1	T	T[20:2825764[	40	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAACTTGATTT;MAPQ=60;MATEID=860836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2817501_2842501_19C;SPAN=3248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96
20	2825764	860836:2	A	]20:2822516]A	40	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAACTTGATTT;MAPQ=60;MATEID=860836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2817501_2842501_19C;SPAN=3248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96
20	3751228	861147:1	T	]20:3886453]T	49	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=861147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_3871001_3896001_4C;SPAN=135225;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:12:12:-49.51:49.51
20	3886453	861147:2	G	G[20:3751228[	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=861147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_3871001_3896001_4C;SPAN=135225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:7:4.5:49.5,4.5,0:12:12:-49.51:49.51
20	4446666	988141:1	G	]Un_KN707691v1_decoy:4885]G	52	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=988141:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_542_1_4885_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:4:4.8:52.8,4.8,0:18:0:-52.81:52.81
20	4988872	861527:1	T	]20:5120848]T	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=861527:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_5120501_5145501_29C;SPAN=131976;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:11:6.8:20,0,6.8:7:0:-20.32:20.32
20	5120848	861527:2	C	C[20:4988872[	20	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=861527:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_5120501_5145501_29C;SPAN=131976;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:11:6.8:20,0,6.8:7:0:-20.32:20.32
20	5648405	861660:1	G	G[20:5649718[	33	PASS	EVDNC=ASSMB;HOMSEQ=CTGTAATCCCAGCACTTTGGGAGGCCGAGG;MAPQ=60;MATEID=861660:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_20_5635001_5660001_0C;SPAN=1313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:4:3:33,3,0:11:0:-33.01:33.01
20	5649718	861660:2	C	]20:5648405]C	33	PASS	EVDNC=ASSMB;HOMSEQ=CTGTAATCCCAGCACTTTGGGAGGCCGAGG;MAPQ=60;MATEID=861660:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_20_5635001_5660001_0C;SPAN=1313;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:4:3:33,3,0:11:0:-33.01:33.01
20	6368548	861822:2	T	T]14:45854840]	27	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=861822:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:45854840(+)-20:6368548(+)__20_6345501_6370501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
20	6681439	861891:2	A	]1:167120498]A	62	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=861891:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_6664001_6689001_24C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72
20	7116263	862037:1	T	T[20:7122199[	52	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=862037:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:7116263(+)-20:7122199(-)__20_7105001_7130001D;SPAN=5936;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:17:4.8:52.8,4.8,0:0:18:-52.81:52.81
20	7122199	862037:2	C	]20:7116263]C	52	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=862037:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:7116263(+)-20:7122199(-)__20_7105001_7130001D;SPAN=5936;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:17:4.8:52.8,4.8,0:0:18:-52.81:52.81
20	7293703	862103:1	T	T[20:7294003[	99	PASS	EVDNC=ASSMB;HOMSEQ=GACAATACATTTTT;MAPQ=60;MATEID=862103:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_7276501_7301501_131C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:24:9.3:102.3,9.3,0:34:0:-102.3:102.3
20	7294003	862103:2	G	]20:7293703]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GACAATACATTTTT;MAPQ=60;MATEID=862103:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_7276501_7301501_131C;SPAN=300;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:34:24:9.3:102.3,9.3,0:34:0:-102.3:102.3
20	7850360	862267:1	T	]20:7932110]T	15	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=T;MAPQ=40;MATEID=862267:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_7913501_7938501_79C;SPAN=81750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:15:15.5:15.5,0,22.1:3:6:-15.59:15.65
20	7932110	862267:2	T	T[20:7850360[	15	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=862267:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_7913501_7938501_79C;SPAN=81750;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:15:15.5:15.5,0,22.1:3:6:-15.59:15.65
20	8006283	866149:1	A	A[20:21398815[	21	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=866149:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21388501_21413501_37C;SPAN=13392532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11
20	10323922	862941:1	C	]20:10324068]C	41	PASS	EVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=862941:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_10314501_10339501_15C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:41:41.3:41.3,0,61.1:16:0:-41.29:41.52
20	10324068	862941:2	T	T[20:10323922[	41	PASS	EVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=862941:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_10314501_10339501_15C;SPAN=146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:41:41.3:41.3,0,61.1:16:0:-41.29:41.52
20	11666903	863362:1	G	G[20:11668022[	62	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=863362:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:11666903(+)-20:11668022(-)__20_11662001_11687001D;SPAN=1119;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:8:5.7:62.7,5.7,0:0:21:-62.72:62.72
20	11668022	863362:2	A	]20:11666903]A	62	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=863362:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:11666903(+)-20:11668022(-)__20_11662001_11687001D;SPAN=1119;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:8:5.7:62.7,5.7,0:0:21:-62.72:62.72
20	14133206	864184:1	T	T[20:14728329[	46	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=864184:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_14724501_14749501_0C;SPAN=595123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:16:0:-46.21:46.21
20	14164805	864303:1	T	T[20:15244618[	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=864303:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15239001_15264001_63C;SPAN=1079813;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:8:3.3:36.3,3.3,0:12:0:-36.31:36.31
20	14728329	864184:2	C	]20:14133206]C	46	PASS	EVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=864184:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_14724501_14749501_0C;SPAN=595123;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:16:0:-46.21:46.21
20	14940342	864232:1	A	A[20:14972845[	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=864232:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:14940342(+)-20:14972845(-)__20_14969501_14994501D;SPAN=32503;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
20	14972845	864232:2	A	]20:14940342]A	26	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=864232:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:14940342(+)-20:14972845(-)__20_14969501_14994501D;SPAN=32503;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04
20	15095882	864265:2	T	T[9:122576590[	29	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=864265:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15092001_15117001_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:7:2.7:29.7,2.7,0:10:0:-29.71:29.71
20	15244618	864303:2	G	]20:14164805]G	36	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=864303:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15239001_15264001_63C;SPAN=1079813;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:8:3.3:36.3,3.3,0:12:0:-36.31:36.31
20	15405783	864334:2	A	]9:122577102]A	39	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=864334:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15386001_15411001_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61
20	15902057	864505:1	T	T[20:15962741[	42	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=864505:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15949501_15974501_3C;SPAN=60684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:13:0:-42.71:42.71
20	15962741	864505:2	T	]20:15902057]T	42	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=864505:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15949501_15974501_3C;SPAN=60684;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:13:0:-42.71:42.71
20	16188295	864602:1	T	]20:16188860]T	24	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=864602:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:16188295(-)-20:16188860(+)__20_16170001_16195001D;SPAN=565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
20	16188860	864602:2	T	T[20:16188295[	24	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=864602:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:16188295(-)-20:16188860(+)__20_16170001_16195001D;SPAN=565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
20	18047369	865156:1	C	C[20:18047636[	46	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CTGAGGTCAGGAGTTCGAGACCAGCCTGACCAATATGATGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCC;MAPQ=60;MATEID=865156:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_20_18032001_18057001_119C;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:8:6:-46.19:46.19
20	18047636	865156:2	C	]20:18047369]C	46	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=CTGAGGTCAGGAGTTCGAGACCAGCCTGACCAATATGATGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCC;MAPQ=60;MATEID=865156:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_20_18032001_18057001_119C;SPAN=267;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:15:4.2:46.2,4.2,0:8:6:-46.19:46.19
20	18261083	865228:1	A	]20:18262525]A	43	PASS	EVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=865228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_18252501_18277501_108C;SPAN=1442;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
20	18262525	865228:2	A	A[20:18261083[	43	PASS	EVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=865228:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_18252501_18277501_108C;SPAN=1442;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87
20	21065659	866065:2	A	[1:53953907[A	32	PASS	DISC_MAPQ=35;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=866065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21045501_21070501_8C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:14:2.6:32.3,0,2.6:9:4:-33.83:33.83
20	21305489	866118:1	A	A[20:21308135[	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA;MAPQ=60;MATEID=866118:2;MATENM=11;NM=2;NUMPARTS=2;SCTG=c_20_21290501_21315501_3C;SPAN=2646;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:8:9:99,9,0:20:20:-99.02:99.02
20	21308135	866118:2	C	]20:21305489]C	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA;MAPQ=60;MATEID=866118:1;MATENM=2;NM=11;NUMPARTS=2;SCTG=c_20_21290501_21315501_3C;SPAN=2646;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:33:8:9:99,9,0:20:20:-99.02:99.02
20	21398815	866149:2	T	]20:8006283]T	21	PASS	EVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=866149:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21388501_21413501_37C;SPAN=13392532;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11
20	21799466	866215:1	G	G[20:21799844[	46	PASS	EVDNC=ASSMB;INSERTION=CAACGTGACTTTGACT;MAPQ=60;MATEID=866215:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21780501_21805501_7C;SPAN=378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:35:39.8:46.4,0,39.8:17:0:-46.29:46.29
20	21799844	866215:2	A	]20:21799466]A	46	PASS	EVDNC=ASSMB;INSERTION=CAACGTGACTTTGACT;MAPQ=60;MATEID=866215:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21780501_21805501_7C;SPAN=378;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:35:39.8:46.4,0,39.8:17:0:-46.29:46.29
20	21869265	866227:1	T	T[20:21869552[	44	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=866227:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_21854001_21879001_35C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:30:31.1:44.3,0,31.1:16:0:-44.51:44.51
20	21869552	866227:2	T	]20:21869265]T	44	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=866227:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_21854001_21879001_35C;SPAN=287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:30:31.1:44.3,0,31.1:16:0:-44.51:44.51
20	23122556	866580:1	C	C[20:23122996[	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=866580:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23103501_23128501_77C;SPAN=440;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
20	23122559	866581:1	G	[20:23122996[G	10	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GG;MAPQ=60;MATEID=866581:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_20_23103501_23128501_37C;SPAN=437;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:35:10.1:10.1,0,76.1:5:4:-9.968:13.04
20	23122996	866580:2	C	]20:23122556]C	20	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=866580:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23103501_23128501_77C;SPAN=440;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36
20	23122996	866581:2	C	[20:23122559[C	10	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GG;MAPQ=60;MATEID=866581:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_20_23103501_23128501_37C;SPAN=437;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:35:10.1:10.1,0,76.1:5:4:-9.968:13.04
20	23520466	866673:1	G	]20:23608865]G	34	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GGGGC;MAPQ=60;MATEID=866673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23495501_23520501_81C;SPAN=88399;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:7:9:-34.32:34.32
20	23608865	866673:2	C	C[20:23520466[	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGGC;MAPQ=60;MATEID=866673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23495501_23520501_81C;SPAN=88399;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:7:9:-34.32:34.32
20	23664456	866799:1	A	]20:23795323]A	39	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=866799:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23664456(-)-20:23795323(+)__20_23789501_23814501D;SPAN=130867;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61
20	23702739	866762:1	A	]20:23765575]A	46	PASS	DISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=866762:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23702739(-)-20:23765575(+)__20_23740501_23765501D;SPAN=62836;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:0:15:-46.21:46.21
20	23765575	866762:2	A	A[20:23702739[	46	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=866762:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23702739(-)-20:23765575(+)__20_23740501_23765501D;SPAN=62836;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:12:4.2:46.2,4.2,0:0:15:-46.21:46.21
20	23795323	866799:2	T	T[20:23664456[	39	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=866799:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23664456(-)-20:23795323(+)__20_23789501_23814501D;SPAN=130867;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61
20	24288974	866997:1	C	C[20:24289194[	41	PASS	EVDNC=ASSMB;HOMSEQ=TATCCTGTATTTTC;MAPQ=60;MATEID=866997:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_24279501_24304501_80C;SPAN=220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
20	24289194	866997:2	T	]20:24288974]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TATCCTGTATTTTC;MAPQ=60;MATEID=866997:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_24279501_24304501_80C;SPAN=220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92
20	24682044	867104:1	G	]20:24682157]G	99	PASS	EVDNC=ASSMB;INSERTION=GC;MAPQ=30;MATEID=867104:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_20_24671501_24696501_54C;SPAN=113;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:37:76:87.8:101,0,87.8:37:0:-100.8:100.8
20	24682157	867104:2	T	T[20:24682044[	99	PASS	EVDNC=ASSMB;INSERTION=GC;MAPQ=60;MATEID=867104:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_20_24671501_24696501_54C;SPAN=113;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:37:76:87.8:101,0,87.8:37:0:-100.8:100.8
20	24923063	867146:1	C	C[20:24923780[	66	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=867146:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_24916501_24941501_23C;SPAN=717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:22:6:66,6,0:20:0:-64.93:64.93
20	24923780	867146:2	G	]20:24923063]G	66	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=867146:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_24916501_24941501_23C;SPAN=717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:22:6:66,6,0:20:0:-64.93:64.93
20	26280028	867748:1	A	A[20:26281095[	75	PASS	DISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=867748:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26280028(+)-20:26281095(-)__20_26264001_26289001D;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:3:6.9:75.9,6.9,0:0:25:-75.92:75.92
20	26281095	867748:2	T	]20:26280028]T	75	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=867748:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26280028(+)-20:26281095(-)__20_26264001_26289001D;SPAN=1067;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:3:6.9:75.9,6.9,0:0:25:-75.92:75.92
20	26317015	867834:1	T	T[20:26322075[	99	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTTGGATCTGCAAGTCGACATTTGGAGCGCTTTGAGGCCT;MAPQ=60;MATEID=867834:2;MATENM=8;NM=8;NUMPARTS=2;SCTG=c_20_26313001_26338001_73C;SPAN=5060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:13:14.7:161.7,14.7,0:25:36:-161.7:161.7
20	26322075	867834:2	G	]20:26317015]G	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTTGGATCTGCAAGTCGACATTTGGAGCGCTTTGAGGCCT;MAPQ=60;MATEID=867834:1;MATENM=8;NM=8;NUMPARTS=2;SCTG=c_20_26313001_26338001_73C;SPAN=5060;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:53:13:14.7:161.7,14.7,0:25:36:-161.7:161.7
20	26364309	867910:1	N	N[20:26366032[	38	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=867910:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26364309(+)-20:26366032(-)__20_26362001_26387001D;SPAN=1723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:0:14:-39.03:39.03
20	26366032	867910:2	T	]20:26364309]T	38	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=867910:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26364309(+)-20:26366032(-)__20_26362001_26387001D;SPAN=1723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:26:25.7:38.9,0,25.7:0:14:-39.03:39.03
20	26366434	867920:1	A	A[20:26368768[	99	PASS	DISC_MAPQ=9;EVDNC=TSI_G;HOMSEQ=CATTCTCAGAAACTTATTTCTGATGCGTGTACTCAACTAACAGAGTTGAACCTTTGTTTTGTCAGAGAAGATTTCAAACTCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGGTGTGTGGATTTCGCTGGAAACGGGAATACATAGAAAAAGCAGACAGCAGCGTTCTGAGAAACTACTTTGTGATGTTTGCATTGAAGTCACAGAGCTGAACACTCCCTTTCATAGATCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAATGGACATTTGGAGCGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCTATAAAAACTAGACAGAAGCATTCTCTGAAACTAGTTTATGATGCATCTACTCAACTAACAGAGTTGAACATTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTGGAATCTCCAAGTGGA;INSERTION=GTTGAACGTTTGTTTTGACAGAGCAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGTGGATGTTCGGTTAGCTTTGCGGATTTCGTTGGAAACGGGAATACGTATAAAAAGCAGACAGCAGCGTTCTGAGAAACTTCATTGTGATGTTTGCATTCAAGTCACGGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTTTGTCATATCTGGAAGTGTCCATTTGGAGCGCGTTCAAGCTTGTGTTGAAAAAAGAAATATCTTCCCTTAAAAATTAGACAGTAG;MAPQ=48;MATEID=867920:2;MATENM=23;NM=5;NUMPARTS=3;SCTG=c_20_26362001_26387001_43C;SECONDARY;SPAN=2334;SUBN=5;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:55:67:4.4:162.8,0,4.4:54:3:-171.5:171.5
20	26368768	867920:2	C	]20:26366434]C	99	PASS	DISC_MAPQ=2;EVDNC=TSI_G;HOMSEQ=CATTCTCAGAAACTTATTTCTGATGCGTGTACTCAACTAACAGAGTTGAACCTTTGTTTTGTCAGAGAAGATTTCAAACTCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGGTGTGTGGATTTCGCTGGAAACGGGAATACATAGAAAAAGCAGACAGCAGCGTTCTGAGAAACTACTTTGTGATGTTTGCATTGAAGTCACAGAGCTGAACACTCCCTTTCATAGATCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAATGGACATTTGGAGCGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCTATAAAAACTAGACAGAAGCATTCTCTGAAACTAGTTTATGATGCATCTACTCAACTAACAGAGTTGAACATTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTGGAATCTCCAAGTGGA;INSERTION=GTTGAACGTTTGTTTTGACAGAGCAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGTGGATGTTCGGTTAGCTTTGCGGATTTCGTTGGAAACGGGAATACGTATAAAAAGCAGACAGCAGCGTTCTGAGAAACTTCATTGTGATGTTTGCATTCAAGTCACGGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTTTGTCATATCTGGAAGTGTCCATTTGGAGCGCGTTCAAGCTTGTGTTGAAAAAAGAAATATCTTCCCTTAAAAATTAGACAGTAG;MAPQ=48;MATEID=867920:1;MATENM=5;NM=23;NUMPARTS=3;SCTG=c_20_26362001_26387001_43C;SECONDARY;SPAN=2334;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:55:67:4.4:162.8,0,4.4:54:3:-171.5:171.5
20	26486446	868032:1	A	A[20:26599740[	32	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=868032:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26486446(+)-20:26599740(-)__20_26484501_26509501D;SPAN=113294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:72:32.6:32.6,0,148.1:0:16:-32.58:36.8
20	26517768	868080:1	A	A[20:26596367[	42	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=868080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26517768(+)-20:26596367(-)__20_26509001_26534001D;SPAN=78599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91
20	26545266	868137:1	T	T[20:26556859[	39	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=868137:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26545266(+)-20:26556859(-)__20_26533501_26558501D;SPAN=11593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
20	26556859	868137:2	C	]20:26545266]C	39	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=868137:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26545266(+)-20:26556859(-)__20_26533501_26558501D;SPAN=11593;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28
20	26596367	868080:2	A	]20:26517768]A	42	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=868080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26517768(+)-20:26596367(-)__20_26509001_26534001D;SPAN=78599;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91
20	26599740	868032:2	T	]20:26486446]T	32	PASS	DISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=868032:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26486446(+)-20:26599740(-)__20_26484501_26509501D;SPAN=113294;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:72:32.6:32.6,0,148.1:0:16:-32.58:36.8
20	26608405	868274:1	C	C[20:26631417[	99	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=868274:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26608405(+)-20:26631417(-)__20_26607001_26632001D;SPAN=23012;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:0:39:-118.8:118.8
20	26615180	868475:1	G	G[20:27261198[	46	PASS	DISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=868475:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26615180(+)-20:27261198(-)__20_27244001_27269001D;SPAN=646018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:9:4.2:46.2,4.2,0:0:15:-46.21:46.21
20	26631417	868274:2	G	]20:26608405]G	99	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=868274:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26608405(+)-20:26631417(-)__20_26607001_26632001D;SPAN=23012;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:17:10.8:118.8,10.8,0:0:39:-118.8:118.8
20	26631898	868385:1	C	C[20:26634139[	21	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=868385:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26631898(+)-20:26634139(-)__20_26631501_26656501D;SPAN=2241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
20	26634139	868385:2	A	]20:26631898]A	21	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=868385:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26631898(+)-20:26634139(-)__20_26631501_26656501D;SPAN=2241;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11
20	26634424	868389:1	A	A]20:26634787]	23	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=868389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26634424(+)-20:26634787(+)__20_26631501_26656501D;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:47:23.3:23.3,0,92.6:0:11:-23.1:25.58
20	26634787	868389:2	C	C]20:26634424]	23	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=868389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26634424(+)-20:26634787(+)__20_26631501_26656501D;SPAN=363;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:47:23.3:23.3,0,92.6:0:11:-23.1:25.58
20	27261198	868475:2	G	]20:26615180]G	46	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=868475:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26615180(+)-20:27261198(-)__20_27244001_27269001D;SPAN=646018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:9:4.2:46.2,4.2,0:0:15:-46.21:46.21
20	27295507	99662:2	G	G[2:94189122[	50	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=99662:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94189122(-)-20:27295507(+)__2_94178001_94203001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:30:24.5:50.9,0,24.5:0:18:-51.49:51.49
20	28728974	892538:1	N	]21:7957991]N	26	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=892538:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28728974(-)-21:7957991(+)__21_7938001_7963001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:81:26.9:26.9,0,175.4:0:15:-26.75:33.16
20	28754934	869379:1	A	A[20:28757852[	99	PASS	DISC_MAPQ=44;EVDNC=ASDIS;HOMSEQ=ATATCCCTTTGCAGACTCTA;MAPQ=60;MATEID=869379:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_28738501_28763501_506C;SPAN=2918;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:41:4:-128.7:128.7
20	28757851	896709:1	N	[21:10798083[N	0	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=896709:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28757851(-)-21:10798083(-)__21_10780001_10805001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:151:16:0,16,412.6:0:8:16.04:13.09
20	28757852	869379:2	A	]20:28754934]A	99	PASS	DISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=ATATCCCTTTGCAGACTCTA;MAPQ=60;MATEID=869379:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_28738501_28763501_506C;SPAN=2918;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:42:19:11.7:128.7,11.7,0:41:4:-128.7:128.7
20	28769332	869502:1	T	]20:28771426]T	60	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TGCACACATCACAAAGAAGTTTCTCAGAATGCTTCTCTCTAGTTTTTATGTGA;MAPQ=60;MATEID=869502:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_20_28763001_28788001_145C;SPAN=2094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:55:60.5:60.5,0,77:11:14:-60.46:60.59
20	28771426	869502:2	A	A[20:28769332[	60	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TGCACACATCACAAAGAAGTTTCTCAGAATGCTTCTCTCTAGTTTTTATGTGA;MAPQ=60;MATEID=869502:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_20_28763001_28788001_145C;SPAN=2094;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:23:55:60.5:60.5,0,77:11:14:-60.46:60.59
20	28781252	658453:2	T	[13:16259044[T	92	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TCAGAATGCTTCTGTGTAGTTTTTTTGTGAAGATATTT;MAPQ=60;MATEID=658453:1;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_13_16243501_16268501_360C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:10:8.4:92.4,8.4,0:21:9:-92.42:92.42
20	28815225	869856:1	C	C[20:28824450[	0	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TATGTGAAGATATTTCC;MAPQ=60;MATEID=869856:2;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_20_28812001_28837001_258C;SPAN=9225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:243:15.1:0,15.1,640.3:10:9:15.49:27.73
20	28815434	869859:1	A	]20:28824721]A	9	PASS	DISC_MAPQ=29;EVDNC=ASDIS;HOMSEQ=ACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAG;MAPQ=60;MATEID=869859:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_20_28812001_28837001_824C;SPAN=9287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:271:9.7:9.7,0,673.1:22:4:-9.65:49.49
20	28824450	869856:2	T	]20:28815225]T	0	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TATGTGAAGATATTTCC;MAPQ=60;MATEID=869856:1;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_20_28812001_28837001_258C;SPAN=9225;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:16:243:15.1:0,15.1,640.3:10:9:15.49:27.73
20	28824721	869859:2	G	G[20:28815434[	9	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAG;MAPQ=60;MATEID=869859:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_20_28812001_28837001_824C;SPAN=9287;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:271:9.7:9.7,0,673.1:22:4:-9.65:49.49
20	28835228	869771:2	T	T[10:39496326[	22	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=869771:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39496326(-)-20:28835228(+)__20_28812001_28837001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25
20	28840026	870053:1	T	T[20:28841515[	0	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=870053:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28840026(+)-20:28841515(-)__20_28836501_28861501D;SPAN=1489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:11:160:8.5:0,8.5,419.2:0:11:8.664:19.28
20	28840894	870075:1	G	]20:29152583]G	47	PASS	DISC_MAPQ=12;EVDNC=ASDIS;HOMSEQ=GTGGAGAAGGAAATATCTTCACATAAAAACTATGCAGAAGCATTCTGAGAAAC;MAPQ=44;MATEID=870075:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_28836501_28861501_26C;SPAN=311689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:44:47:47,0,63.5:13:5:-47.05:47.19
20	28841515	870053:2	G	]20:28840026]G	0	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=870053:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28840026(+)-20:28841515(-)__20_28836501_28861501D;SPAN=1489;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:11:160:8.5:0,8.5,419.2:0:11:8.664:19.28
20	28859998	870106:1	T	]20:28860195]T	66	PASS	EVDNC=ASSMB;HOMSEQ=TCACACATCACAAAGAAGTTTCTCAGA;MAPQ=60;MATEID=870106:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_116C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:46:46.7:66.5,0,46.7:24:0:-66.42:66.42
20	28860195	870106:2	A	A[20:28859998[	66	PASS	EVDNC=ASSMB;HOMSEQ=TCACACATCACAAAGAAGTTTCTCAGA;MAPQ=60;MATEID=870106:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_116C;SPAN=197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:46:46.7:66.5,0,46.7:24:0:-66.42:66.42
20	28861335	870221:1	A	A[20:28868471[	46	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=870221:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28861335(+)-20:28868471(-)__20_28861001_28886001D;SPAN=7136;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:11:4.2:46.2,4.2,0:0:16:-46.21:46.21
20	28868471	870221:2	T	]20:28861335]T	46	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=870221:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28861335(+)-20:28868471(-)__20_28861001_28886001D;SPAN=7136;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:11:4.2:46.2,4.2,0:0:16:-46.21:46.21
20	28897172	870531:1	T	T[20:29189810[	42	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=870531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28897172(+)-20:29189810(-)__20_28885501_28910501D;SPAN=292638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:26:22.4:42.2,0,22.4:0:15:-42.5:42.5
20	29062721	873050:1	G	G]20:29515167]	37	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=873050:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29062721(+)-20:29515167(+)__20_29498001_29523001D;SPAN=452446;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:0:14:-36.94:36.99
20	29088471	870919:2	T	]4:189948866]T	3	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=870919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:189948866(+)-20:29088471(-)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:81:3.8:3.8,0,198.5:0:8:-3.64:15.33
20	29090598	870923:2	G	G]9:63843968]	39	PASS	DISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=870923:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:63843968(+)-20:29090598(+)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:83:39.5:39.5,0,168.2:0:19:-39.39:43.98
20	29130127	871760:1	A	]20:29193597]A	23	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=871760:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29130127(-)-20:29193597(+)__20_29179501_29204501D;SPAN=63470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
20	29152222	871389:1	A	]20:29152743]A	36	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=871389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29152222(-)-20:29152743(+)__20_29130501_29155501D;SPAN=521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
20	29152583	870075:2	C	C[20:28840894[	47	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GTGGAGAAGGAAATATCTTCACATAAAAACTATGCAGAAGCATTCTGAGAAAC;MAPQ=60;MATEID=870075:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_26C;SPAN=311689;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:44:47:47,0,63.5:13:5:-47.05:47.19
20	29152743	871389:2	T	T[20:29152222[	36	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=871389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29152222(-)-20:29152743(+)__20_29130501_29155501D;SPAN=521;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86
20	29155988	871853:1	T	T[20:29187554[	75	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871853:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29155988(+)-20:29187554(-)__20_29179501_29204501D;SPAN=31566;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92
20	29164587	872074:1	T	T[20:29203980[	23	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=872074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29164587(+)-20:29203980(-)__20_29204001_29229001D;SPAN=39393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11
20	29174443	871670:1	A	A[20:29196966[	42	PASS	DISC_MAPQ=29;EVDNC=ASDIS;HOMSEQ=ATAAAAACTACACAGAAGCATTCTGA;MAPQ=28;MATEID=871670:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29155001_29180001_171C;SPAN=22523;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91
20	29187554	871853:2	T	]20:29155988]T	75	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871853:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29155988(+)-20:29187554(-)__20_29179501_29204501D;SPAN=31566;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92
20	29189810	870531:2	G	]20:28897172]G	42	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=870531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28897172(+)-20:29189810(-)__20_28885501_28910501D;SPAN=292638;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:26:22.4:42.2,0,22.4:0:15:-42.5:42.5
20	29193222	871987:1	A	]20:29193786]A	27	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=871987:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29193222(-)-20:29193786(+)__20_29179501_29204501D;SPAN=564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
20	29193597	871760:2	G	G[20:29130127[	23	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871760:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29130127(-)-20:29193597(+)__20_29179501_29204501D;SPAN=63470;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59
20	29193786	871987:2	G	G[20:29193222[	27	PASS	DISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=871987:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29193222(-)-20:29193786(+)__20_29179501_29204501D;SPAN=564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73
20	29196966	871670:2	A	]20:29174443]A	42	PASS	DISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=ATAAAAACTACACAGAAGCATTCTGA;MAPQ=60;MATEID=871670:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29155001_29180001_171C;SPAN=22523;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91
20	29203980	872074:2	C	]20:29164587]C	23	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=872074:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29164587(+)-20:29203980(-)__20_29204001_29229001D;SPAN=39393;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11
20	29204766	874418:1	N	[20:29888901[N	99	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=874418:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29204766(-)-20:29888901(-)__20_29865501_29890501D;SPAN=684135;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:8:18.9:207.9,18.9,0:0:68:-208:208
20	29213586	872096:1	A	A[20:29213887[	85	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAA;MAPQ=60;MATEID=872096:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_29204001_29229001_118C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:38:9.2:85.1,0,9.2:22:9:-88.4:88.4
20	29213887	872096:2	G	]20:29213586]G	85	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAA;MAPQ=60;MATEID=872096:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_29204001_29229001_118C;SPAN=301;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:38:9.2:85.1,0,9.2:22:9:-88.4:88.4
20	29214602	872097:1	A	]20:29215222]A	24	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=872097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29214602(-)-20:29215222(+)__20_29204001_29229001D;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
20	29215222	872097:2	A	A[20:29214602[	24	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=872097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29214602(-)-20:29215222(+)__20_29204001_29229001D;SPAN=620;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91
20	29224086	872116:1	T	]20:29224489]T	23	PASS	DISC_MAPQ=27;EVDNC=ASDIS;HOMSEQ=TCTGCAAAGGGATATTTGTGAGTGCTTTGAGGCCTATGGTGAAACAGGAAATATCTTCAC;MAPQ=60;MATEID=872116:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_29204001_29229001_43C;SPAN=403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:70:23.3:23.3,0,152:11:10:-23.24:28.76
20	29224489	872116:2	C	C[20:29224086[	23	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TCTGCAAAGGGATATTTGTGAGTGCTTTGAGGCCTATGGTGAAACAGGAAATATCTTCAC;MAPQ=60;MATEID=872116:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_29204001_29229001_43C;SPAN=403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:70:23.3:23.3,0,152:11:10:-23.24:28.76
20	29258255	872237:1	A	A]20:29888628]	39	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=872237:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29258255(+)-20:29888628(+)__20_29253001_29278001D;SPAN=630373;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:0:14:-39.39:39.39
20	29294840	872375:1	A	A[20:30482683[	23	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=872375:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29294840(+)-20:30482683(-)__20_29277501_29302501D;SPAN=1187843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42
20	29375944	168761:2	G	[3:75703640[G	66	PASS	DISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=168761:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75703640(-)-20:29375944(-)__3_75680501_75705501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:26:0.6:66,0.6,0:0:22:-69.34:69.34
20	29407505	872869:2	A	[3:75673010[A	33	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=872869:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75673010(-)-20:29407505(-)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:45:33.5:33.5,0,79.7:0:14:-33.57:34.6
20	29412524	168580:2	N	N]3:75668011]	37	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=168580:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75668011(+)-20:29412524(+)__3_75656001_75681001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:44:37.1:37.1,0,73.4:0:15:-37.15:37.81
20	29418432	872855:2	T	T]3:75662822]	23	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=872855:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75662822(+)-20:29418432(+)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
20	29515167	873050:2	G	G]20:29062721]	37	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=873050:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29062721(+)-20:29515167(+)__20_29498001_29523001D;SPAN=452446;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:0:14:-36.94:36.99
20	29565353	875088:1	N	[20:30318846[N	23	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=875088:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29565353(-)-20:30318846(-)__20_30306501_30331501D;SPAN=753493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
20	29636132	873198:2	T	]9:61735346]T	36	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=873198:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:61735346(+)-20:29636132(-)__20_29620501_29645501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66
20	29700083	873591:1	A	A[20:29703090[	26	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=873591:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29700083(+)-20:29703090(-)__20_29694001_29719001D;SPAN=3007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
20	29703090	873591:2	G	]20:29700083]G	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=873591:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29700083(+)-20:29703090(-)__20_29694001_29719001D;SPAN=3007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93
20	29836455	874088:1	A	A[20:29837181[	5	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=874088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29816501_29841501_464C;SPAN=726;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
20	29837181	874088:2	A	]20:29836455]A	5	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=874088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29816501_29841501_464C;SPAN=726;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24
20	29851924	908592:1	G	]22:11373695]G	61	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAG;MAPQ=60;MATEID=908592:2;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_22_11368001_11393001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:41:41.3:61.1,0,41.3:9:14:-61.28:61.28
20	29888628	872237:2	T	T]20:29258255]	39	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=872237:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29258255(+)-20:29888628(+)__20_29253001_29278001D;SPAN=630373;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:25:22.7:39.2,0,22.7:0:14:-39.39:39.39
20	29888901	874418:2	A	[20:29204766[A	99	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=874418:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29204766(-)-20:29888901(-)__20_29865501_29890501D;SPAN=684135;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:68:8:18.9:207.9,18.9,0:0:68:-208:208
20	29983825	874677:1	A	A[20:30140273[	99	PASS	DISC_MAPQ=48;EVDNC=TSI_L;HOMSEQ=AAAGGAAATATCTTCACATAAAAACTAGACAGA;MAPQ=56;MATEID=874677:2;MATENM=11;NM=1;NUMPARTS=3;SCTG=c_20_29963501_29988501_205C;SPAN=156448;SUBN=6;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:87:26:24.3:267.3,24.3,0:71:25:-267.4:267.4
20	30140273	874677:2	A	]20:29983825]A	99	PASS	DISC_MAPQ=11;EVDNC=TSI_L;HOMSEQ=AAAGGAAATATCTTCACATAAAAACTAGACAGA;MAPQ=33;MATEID=874677:1;MATENM=1;NM=11;NUMPARTS=3;SCTG=c_20_29963501_29988501_205C;SPAN=156448;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:87:26:24.3:267.3,24.3,0:71:25:-267.4:267.4
20	30318846	875088:2	G	[20:29565353[G	23	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=875088:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29565353(-)-20:30318846(-)__20_30306501_30331501D;SPAN=753493;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37
20	30482683	872375:2	T	]20:29294840]T	23	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=872375:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29294840(+)-20:30482683(-)__20_29277501_29302501D;SPAN=1187843;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42
20	30502676	875478:2	G	]2:132270852]G	59	PASS	DISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=875478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132270852(+)-20:30502676(-)__20_30502501_30527501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:20:5.4:59.4,5.4,0:0:18:-58.15:58.15
20	30594240	998499:1	G	]Un_JTFH01000605v1_decoy:968]G	29	PASS	EVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=998499:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_1448_1_1389_5C;SPAN=-1;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55
20	30926139	876115:2	T	[19:27365941[T	68	PASS	DISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=TGCATATTCTACAGAAAGACTGTTTCCAAA;MAPQ=19;MATEID=876115:1;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=TT;SCTG=c_20_30919001_30944001_257C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:98:68.3:68.3,0,177.2:26:4:-68.18:70.92
20	31487269	878350:1	G	]20:31768542]G	49	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=878350:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_31752001_31777001_19C;SPAN=281273;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:15:8:-49.51:49.51
20	31768542	878350:2	G	G[20:31487269[	49	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=878350:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_31752001_31777001_19C;SPAN=281273;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:17:4.5:49.5,4.5,0:15:8:-49.51:49.51
20	32723074	878580:1	G	G[20:32724972[	66	PASS	EVDNC=ASSMB;HOMSEQ=AAAGACTTGTG;MAPQ=60;MATEID=878580:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_20_32707501_32732501_73C;SPAN=1898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:11:6:66,6,0:22:0:-66.02:66.02
20	32724972	878580:2	A	]20:32723074]A	66	PASS	EVDNC=ASSMB;HOMSEQ=AAAGACTTGTG;MAPQ=60;MATEID=878580:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_20_32707501_32732501_73C;SPAN=1898;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:11:6:66,6,0:22:0:-66.02:66.02
20	34228132	878957:1	C	C[20:34231420[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGAACTTTC;MAPQ=60;MATEID=878957:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34226501_34251501_29C;SPAN=3288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:15:1244:99:0,299.7,3733:10:9:300.2:14.95
20	34231420	878957:2	T	]20:34228132]T	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGAACTTTC;MAPQ=60;MATEID=878957:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34226501_34251501_29C;SPAN=3288;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:15:1244:99:0,299.7,3733:10:9:300.2:14.95
20	34528026	879054:1	T	T[20:34528340[	27	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTACCCTACTGGAGT;MAPQ=60;MATEID=879054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34520501_34545501_37C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
20	34528340	879054:2	A	]20:34528026]A	27	PASS	EVDNC=ASSMB;HOMSEQ=AAAAACTACCCTACTGGAGT;MAPQ=60;MATEID=879054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34520501_34545501_37C;SPAN=314;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11
20	35033863	879169:1	A	A[20:35034175[	17	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGTAAA;MAPQ=60;MATEID=879169:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_35010501_35035501_48C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:43:17.6:17.6,0,90.2:9:0:-17.62:20.44
20	35034175	879169:2	A	]20:35033863]A	17	PASS	EVDNC=ASSMB;HOMSEQ=AAAAGAGTAAA;MAPQ=60;MATEID=879169:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_35010501_35035501_48C;SPAN=312;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:43:17.6:17.6,0,90.2:9:0:-17.62:20.44
20	35041059	879174:1	A	]20:35041155]A	8	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879174:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35035001_35060001_27C;SPAN=96;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:27:8.9:8.9,0,58.4:5:0:-8.916:11.05
20	35041155	879174:2	A	A[20:35041059[	8	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879174:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35035001_35060001_27C;SPAN=96;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:27:8.9:8.9,0,58.4:5:0:-8.916:11.05
20	35564373	879364:1	A	]20:35564522]A	52	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35549501_35574501_16C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:48:52.7:52.7,0,65.9:20:0:-52.53:52.64
20	35564522	879364:2	A	A[20:35564373[	52	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35549501_35574501_16C;SPAN=149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:48:52.7:52.7,0,65.9:20:0:-52.53:52.64
20	38793597	880214:1	C	]20:38793774]C	11	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=880214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_38783501_38808501_31C;SPAN=177;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:32:11:11,0,67.1:6:0:-10.81:13.3
20	38793774	880214:2	C	C[20:38793597[	11	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=880214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_38783501_38808501_31C;SPAN=177;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:32:11:11,0,67.1:6:0:-10.81:13.3
20	40861608	880606:2	G	[1:119717902[G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=880606:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_40841501_40866501_68C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:52:21:14.4:158.4,14.4,0:29:38:-158.4:158.4
20	40863081	880611:1	C	C[20:40871469[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=880611:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_20_40866001_40891001_69C;SPAN=8388;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
20	40871469	880611:2	T	]20:40863081]T	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=880611:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_20_40866001_40891001_69C;SPAN=8388;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6
20	40888416	881229:1	G	]20:42600872]G	12	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=881229:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42581001_42606001_108C;SPAN=1712456;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05
20	41014579	880709:1	T	]20:41077934]T	33	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=880709:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41062001_41087001_8C;SPAN=63355;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77
20	41077934	880709:2	G	G[20:41014579[	33	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=880709:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41062001_41087001_8C;SPAN=63355;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77
20	41100800	880736:1	A	]20:41153377]A	37	PASS	EVDNC=ASSMB;INSERTION=TCATCTGCAGCCTCAAACCC;MAPQ=60;MATEID=880736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41135501_41160501_11C;SPAN=52577;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:54:37.7:37.7,0,97.1:16:0:-37.64:39.14
20	41153377	880736:2	C	C[20:41100800[	37	PASS	EVDNC=ASSMB;INSERTION=TCATCTGCAGCCTCAAACCC;MAPQ=60;MATEID=880736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41135501_41160501_11C;SPAN=52577;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:54:37.7:37.7,0,97.1:16:0:-37.64:39.14
20	41277735	880780:1	G	G[20:41278845[	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGG;MAPQ=60;MATEID=880780:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_41258001_41283001_45C;SPAN=1110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:50:13.8:151.8,13.8,0:28:32:-151.8:151.8
20	41278845	880780:2	T	]20:41277735]T	99	PASS	DISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGG;MAPQ=60;MATEID=880780:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_41258001_41283001_45C;SPAN=1110;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:50:50:13.8:151.8,13.8,0:28:32:-151.8:151.8
20	42187003	881086:1	T	[20:57243066[T	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=881086:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42164501_42189501_4C;SPAN=15056063;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:50:22.4:101.6,0,22.4:17:25:-104.1:104.1
20	42213358	881105:1	T	]20:42215833]T	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=881105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:42213358(-)-20:42215833(+)__20_42213501_42238501D;SPAN=2475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:0:11:-23.94:25.95
20	42215833	881105:2	C	C[20:42213358[	23	PASS	DISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=881105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:42213358(-)-20:42215833(+)__20_42213501_42238501D;SPAN=2475;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:0:11:-23.94:25.95
20	42220432	881117:1	C	]20:42244661]C	58	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=881117:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42238001_42263001_7C;SPAN=24229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:40:41.6:58.1,0,41.6:21:0:-58.2:58.2
20	42241304	883732:1	G	]20:49308943]G	99	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=883732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_43C;SPAN=7067639;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:34:9.3:102.3,9.3,0:31:0:-100.8:100.8
20	42244661	881117:2	C	C[20:42220432[	58	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=881117:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42238001_42263001_7C;SPAN=24229;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:40:41.6:58.1,0,41.6:21:0:-58.2:58.2
20	42374557	881140:2	C	[17:58625792[C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=881140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42360501_42385501_15C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:34:13.5:148.5,13.5,0:31:28:-148.5:148.5
20	42447943	881169:2	T	]1:114822463]T	99	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=881169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42434001_42459001_33C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:51:41:14.1:155.1,14.1,0:51:0:-155.1:155.1
20	42600872	881229:2	T	T[20:40888416[	12	PASS	EVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=881229:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42581001_42606001_108C;SPAN=1712456;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05
20	42679541	881265:2	G	G[1:119844586[	99	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881265:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_42679001_42704001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:40:27:11.1:122.1,11.1,0:40:0:-122.1:122.1
20	43396070	881430:1	T	T[20:43397151[	89	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=881430:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43396070(+)-20:43397151(-)__20_43389501_43414501D;SPAN=1081;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12
20	43397151	881430:2	A	]20:43396070]A	89	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=881430:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43396070(+)-20:43397151(-)__20_43389501_43414501D;SPAN=1081;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12
20	43568137	881500:1	G	]20:50015936]G	62	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881500:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43561001_43586001_0C;SPAN=6447799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:21:5.7:62.7,5.7,0:20:0:-62.72:62.72
20	43595420	883769:1	G	]20:49349984]G	99	PASS	DISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GTGC;MAPQ=60;MATEID=883769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49343001_49368001_42C;SPAN=5754564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:28:9.9:108.9,9.9,0:26:24:-108.9:108.9
20	43643335	881547:1	A	A[20:43645931[	92	PASS	DISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=881547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43643335(+)-20:43645931(-)__20_43634501_43659501D;SPAN=2596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:1:8.4:92.4,8.4,0:0:30:-92.42:92.42
20	43645931	881547:2	C	]20:43643335]C	92	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=881547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43643335(+)-20:43645931(-)__20_43634501_43659501D;SPAN=2596;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:30:1:8.4:92.4,8.4,0:0:30:-92.42:92.42
20	43696487	881586:1	C	]20:43697013]C	80	PASS	EVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=881586:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43683501_43708501_25C;SPAN=526;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76
20	43697013	881586:2	C	C[20:43696487[	80	PASS	EVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=881586:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43683501_43708501_25C;SPAN=526;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76
20	44025527	997507:1	G	]Un_JTFH01000380v1_decoy:1876]G	89	PASS	EVDNC=ASSMB;HOMSEQ=GCATCAGCTGCACCCCCACTCATGG;MAPQ=60;MATEID=997507:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1223_1_1876_5C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:29:8:8.1:89.1,8.1,0:29:0:-89.12:89.12
20	44677206	881853:1	T	T]20:44683574]	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=881853:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_44663501_44688501_46C;SPAN=6368;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:51:41.9:84.8,0,41.9:28:2:-85.4:85.4
20	44680251	881856:1	C	[20:44683268[C	99	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CAGG;MAPQ=60;MATEID=881856:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_44663501_44688501_9C;SPAN=3017;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:55:7.7:129.8,0,7.7:33:16:-136.1:136.1
20	44683268	881856:2	C	[20:44680251[C	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGG;MAPQ=60;MATEID=881856:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_44663501_44688501_9C;SPAN=3017;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:44:55:7.7:129.8,0,7.7:33:16:-136.1:136.1
20	44683574	881853:2	G	G]20:44677206]	84	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=881853:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_44663501_44688501_46C;SPAN=6368;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:51:41.9:84.8,0,41.9:28:2:-85.4:85.4
20	47141443	886074:1	T	[20:55582440[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=886074:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_55566001_55591001_12C;SPAN=8440997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:115:158:61.4:335.3,0,61.4:71:81:-345.8:345.8
20	47143282	882804:2	T	T[17:61924313[	99	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=882804:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:46:119:99:118.4,0,181.1:46:0:-118.4:119.1
20	47143403	882813:1	T	T[20:47149693[	42	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=882813:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:47143403(+)-20:47149693(-)__20_47138001_47163001D;SPAN=6290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:73:42.2:42.2,0,141.2:0:19:-42.2:45.21
20	47149693	882813:2	A	]20:47143403]A	42	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=882813:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:47143403(+)-20:47149693(-)__20_47138001_47163001D;SPAN=6290;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:73:42.2:42.2,0,141.2:0:19:-42.2:45.21
20	47149699	882806:2	A	]17:61924536]A	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=882806:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_44C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:88:79:24.6:270.6,24.6,0:20:79:-270.7:270.7
20	47150452	882808:2	A	A[17:62000916[	99	PASS	EVDNC=ASSMB;HOMSEQ=CCA;MAPQ=60;MATEID=882808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:62:129:99:168.5,0,155.3:62:0:-168.4:168.4
20	47156833	882810:2	A	]17:63002553]A	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=882810:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_67C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:71:137:99:196.1,0,146.6:71:0:-196.2:196.2
20	47159653	889878:1	A	A[20:63657381[	99	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=889878:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_63651001_63676001_40C;SPAN=16497728;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:72:160:99:192.8,0,209.3:72:0:-192.7:192.7
20	47170985	25102:2	T	[1:107091117[T	43	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=25102:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107089501_107114501_14C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:106:43.1:43.1,0,221.3:12:17:-42.83:49.86
20	47190406	503963:2	G	]9:88385279]G	35	PASS	EVDNC=ASSMB;INSERTION=CAAAGCTAAAAAATGTAGG;MAPQ=60;MATEID=503963:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_88371501_88396501_10C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:28:35:35,0,35:13:0:-35.04:35.04
20	47231949	164115:2	C	]3:61900033]C	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GA;MAPQ=60;MATEID=164115:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_61887001_61912001_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:74:0.9:0,0.9,188.1:4:3:0.9948:10.96
20	47378938	188279:2	A	[3:124690602[A	49	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=188279:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_124680501_124705501_76C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:19:1.8:49.5,1.8,0:7:12:-50.34:50.34
20	47414043	25634:2	G	]1:108106953]G	76	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=25634:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_99C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:27:46:36.8:76.4,0,36.8:27:0:-76.82:76.82
20	47506404	24780:2	A	A[1:106530936[	41	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=24780:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_106526001_106551001_55C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:89:41:41,0,182.9:20:0:-41:46.11
20	47575486	883062:1	C	[20:48174860[C	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GCCAGATGGCCAGTTCCCA;MAPQ=60;MATEID=883062:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_48167001_48192001_41C;SPAN=599374;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:118:13.2:0,13.2,323.4:4:2:13.36:9.71
20	47782526	882837:2	G	G[8:100064021[	63	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=882837:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47775001_47800001_26C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:116:63.2:63.2,0,228.2:20:27:-63.12:68.41
20	47786130	882842:1	G	[20:53583543[G	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=882842:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47775001_47800001_30C;SPAN=5797413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:128:17:17,0,304.1:12:7:-16.84:32.4
20	47787044	25218:2	A	]1:107264508]A	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=CATGACAGGACAGGAGGCTGGGGGGAA;MAPQ=60;MATEID=25218:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_107261001_107286001_19C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:5:143:23.5:0,23.5,405.9:2:3:23.69:7.268
20	47911413	884570:1	G	[20:51227568[G	36	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=884570:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_20_51205001_51230001_24C;SPAN=3316155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:46:36.8:36.8,0,76.4:12:4:-36.59:37.45
20	47926746	885085:1	T	]20:52041378]T	37	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=885085:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52038001_52063001_110C;SPAN=4114632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
20	47941032	884572:1	C	]20:51228057]C	29	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=884572:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51205001_51230001_7C;SPAN=3287025;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:47:29.9:29.9,0,86:13:0:-29.7:31.34
20	48030664	27803:2	T	T[1:114491354[	0	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=27803:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_114488501_114513501_55C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:130:13.2:0,13.2,353.1:7:0:13.44:11.51
20	48030700	882999:1	A	[20:53920058[A	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=882999:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48020001_48045001_102C;SPAN=5889358;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:158:21.1:0,21.1,439:7:2:21.31:10.9
20	48074545	883036:1	T	]20:48105807]T	8	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=883036:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48093501_48118501_5C;SPAN=31262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:146:8.6:8.6,0,358.4:15:0:-8.476:29.02
20	48074953	883008:2	A	A[1:106630185[	10	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=883008:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48069001_48094001_66C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:153:10:10,0,373.1:13:6:-9.809:31.08
20	48085502	883009:2	A	[1:116254645[A	1	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCT;MAPQ=60;MATEID=883009:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48069001_48094001_59C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:147:1.6:1.6,0,368:8:9:-1.593:24.26
20	48105807	883036:2	A	A[20:48074545[	8	PASS	EVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=883036:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48093501_48118501_5C;SPAN=31262;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:146:8.6:8.6,0,358.4:15:0:-8.476:29.02
20	48174860	883062:2	T	[20:47575486[T	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCCAGATGGCCAGTTCCCA;MAPQ=60;MATEID=883062:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_48167001_48192001_41C;SPAN=599374;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:118:13.2:0,13.2,323.4:4:2:13.36:9.71
20	48502384	883254:1	C	C[20:48502814[	0	PASS	EVDNC=ASSMB;HOMSEQ=GCACCGGCTCTTCCCAGGATCTCCAGC;MAPQ=60;MATEID=883254:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48485501_48510501_80C;SPAN=430;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:10:190:20.2:0,20.2,518.2:10:0:20.4:16.34
20	48502814	883254:2	G	]20:48502384]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GCACCGGCTCTTCCCAGGATCTCCAGC;MAPQ=60;MATEID=883254:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48485501_48510501_80C;SPAN=430;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:10:190:20.2:0,20.2,518.2:10:0:20.4:16.34
20	48827701	883494:2	G	[3:195886346[G	1	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTACTT;MAPQ=60;MATEID=883494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48804001_48829001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:55:1.1:1.1,0,136.4:3:3:-1.045:9.394
20	48883196	27990:2	A	[1:114692386[A	2	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=27990:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_114684501_114709501_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:120:2.6:2.6,0,299.6:8:7:-2.58:20.71
20	49298635	885111:1	C	[20:52063701[C	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=885111:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52062501_52087501_16C;SPAN=2765066;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:38:13.5:148.5,13.5,0:27:34:-148.5:148.5
20	49308943	883732:2	A	A[20:42241304[	99	PASS	EVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=883732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_43C;SPAN=7067639;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:34:9.3:102.3,9.3,0:31:0:-100.8:100.8
20	49309026	883730:2	A	]1:113786165]A	47	PASS	EVDNC=ASSMB;HOMSEQ=AGAT;MAPQ=60;MATEID=883730:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25
20	49325638	883756:1	T	]20:49325721]T	73	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACAGGGTTATTAGATGGATGTTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACGGGGTTATTAGATGGA;MAPQ=60;MATEID=883756:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_20_49318501_49343501_41C;SPAN=83;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:104:73.1:73.1,0,188.6:31:0:-73.1:75.93
20	49325721	883756:2	G	G[20:49325638[	73	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACAGGGTTATTAGATGGATGTTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACGGGGTTATTAGATGGA;MAPQ=60;MATEID=883756:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_20_49318501_49343501_41C;SPAN=83;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:31:104:73.1:73.1,0,188.6:31:0:-73.1:75.93
20	49349984	883769:2	C	C[20:43595420[	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGC;MAPQ=60;MATEID=883769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49343001_49368001_42C;SPAN=5754564;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:36:28:9.9:108.9,9.9,0:26:24:-108.9:108.9
20	49351536	885112:1	T	[20:52068428[T	70	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=885112:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52062501_52087501_17C;SPAN=2716892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:19:10:-73.47:73.47
20	49875445	883982:2	G	[17:82953195[G	95	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=883982:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49857501_49882501_45C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:32:31:8.7:95.7,8.7,0:24:12:-95.72:95.72
20	50015936	881500:2	G	G[20:43568137[	62	PASS	EVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881500:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43561001_43586001_0C;SPAN=6447799;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:21:5.7:62.7,5.7,0:20:0:-62.72:62.72
20	50110068	884135:2	G	[17:61398559[G	17	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=884135:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_50102501_50127501_30C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:34:17:17,0,66.5:4:6:-16.85:18.63
20	50678547	889981:1	G	[20:63864221[G	44	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=889981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63847001_63872001_13C;SPAN=13185674;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:29:28.1:44.6,0,28.1:6:10:-44.86:44.86
20	50816138	884415:1	G	]20:50816769]G	75	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCAGCCTCCTGAGTAGCTGGGACTACAGAC;MAPQ=60;MATEID=884415:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_50813001_50838001_17C;SPAN=631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:73:75.2:75.2,0,108.2:29:0:-75.21:75.54
20	50816769	884415:2	C	C[20:50816138[	75	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCAGCCTCCTGAGTAGCTGGGACTACAGAC;MAPQ=60;MATEID=884415:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_50813001_50838001_17C;SPAN=631;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:73:75.2:75.2,0,108.2:29:0:-75.21:75.54
20	51129425	884509:2	G	[1:107571647[G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=884509:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51107001_51132001_42C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:38:10.5:115.5,10.5,0:22:32:-114.4:114.4
20	51227568	884570:2	C	[20:47911413[C	36	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=884570:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_20_51205001_51230001_24C;SPAN=3316155;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:46:36.8:36.8,0,76.4:12:4:-36.59:37.45
20	51228057	884572:2	T	T[20:47941032[	29	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=884572:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51205001_51230001_7C;SPAN=3287025;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:47:29.9:29.9,0,86:13:0:-29.7:31.34
20	51569452	889168:1	G	[20:62201797[G	24	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TATC;MAPQ=60;MATEID=889168:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_62181001_62206001_66C;SPAN=10632345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:7:8:-24.3:24.91
20	52003779	885044:2	A	A[17:75280201[	61	PASS	EVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=885044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51989001_52014001_51C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62
20	52041378	885085:2	T	T[20:47926746[	37	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=885085:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52038001_52063001_110C;SPAN=4114632;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99
20	52043400	885083:2	T	[9:75533771[T	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=885083:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_52038001_52063001_156C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:36:36.2:52.7,0,36.2:14:14:-52.72:52.72
20	52063701	885111:2	G	[20:49298635[G	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=885111:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52062501_52087501_16C;SPAN=2765066;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:38:13.5:148.5,13.5,0:27:34:-148.5:148.5
20	52068428	885112:2	A	[20:49351536[A	70	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=885112:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52062501_52087501_17C;SPAN=2716892;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:31:4.7:70.7,0,4.7:19:10:-73.47:73.47
20	52142667	885142:1	C	C[20:52144390[	27	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=CAACATGGTGAAACCC;MAPQ=53;MATEID=885142:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52136001_52161001_39C;SPAN=1723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:7:6:-27.73:27.73
20	52144390	885142:2	C	]20:52142667]C	27	PASS	DISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CAACATGGTGAAACCC;MAPQ=60;MATEID=885142:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52136001_52161001_39C;SPAN=1723;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:19:17.9:27.8,0,17.9:7:6:-27.73:27.73
20	53413597	885591:2	A	]1:107577023]A	69	PASS	EVDNC=ASSMB;INSERTION=GTAAATA;MAPQ=60;MATEID=885591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_53410001_53435001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32
20	53431676	885592:2	T	[1:113786160[T	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=885592:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_53410001_53435001_11C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:45:24:12.6:138.6,12.6,0:31:26:-138.6:138.6
20	53583543	882842:2	C	[20:47786130[C	17	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=882842:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47775001_47800001_30C;SPAN=5797413;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:128:17:17,0,304.1:12:7:-16.84:32.4
20	53736867	27881:2	G	[1:114616011[G	5	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=27881:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_114611001_114636001_102C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:145:5.6:5.6,0,358.7:9:8:-5.456:26.69
20	53847498	164629:2	T	]3:62865005]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=164629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62842501_62867501_139C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:82:46.4:46.4,0,158.6:21:0:-46.27:49.79
20	53866284	805985:2	A	A[17:47670040[	23	PASS	EVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=805985:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_47652501_47677501_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84
20	53882695	903694:1	C	[21:38009271[C	85	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=903694:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_37999501_38024501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:22:7.8:85.8,7.8,0:14:18:-85.82:85.82
20	53920058	882999:2	T	[20:48030700[T	0	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=882999:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48020001_48045001_102C;SPAN=5889358;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:158:21.1:0,21.1,439:7:2:21.31:10.9
20	54159808	408662:2	C	C[7:79131175[	34	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=408662:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79110501_79135501_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03
20	54727260	164077:2	T	[3:61807360[T	15	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TTTACA;MAPQ=60;MATEID=164077:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_61789001_61814001_51C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:98:15.5:15.5,0,230:9:8:-15.37:26.69
20	54778249	164561:2	T	[3:62727512[T	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=164561:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_62720001_62745001_150C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:40:78:83.9:110.3,0,83.9:29:24:-110.3:110.3
20	54940897	811695:2	T	T[17:64310797[	99	PASS	DISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CAACAAATGTTTATTGAGTTTATACTATAAACCTTCTCCTCTTTCCTTTGCTGACTCTCTGCCTGGAACT;MAPQ=60;MATEID=811695:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_64288001_64313001_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:118:103:33:363,33,0:118:0:-363.1:363.1
20	55576908	886070:2	T	]17:61909172]T	99	PASS	EVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=886070:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_55566001_55591001_71C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:60:167:99:151.4,0,266.9:60:0:-151.1:152.9
20	55582440	886074:2	G	[20:47141443[G	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=886074:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_55566001_55591001_12C;SPAN=8440997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:115:158:61.4:335.3,0,61.4:71:81:-345.8:345.8
20	55583060	886095:1	G	G]20:55586393]	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=886095:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:55583060(+)-20:55586393(+)__20_55566001_55591001D;SPAN=3333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:58:71:6.5:171.5,0,6.5:0:58:-180.6:180.6
20	55584209	886073:2	T	[17:62017132[T	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TCAA;MAPQ=60;MATEID=886073:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_55566001_55591001_45C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:74:124:99:209.6,0,100.7:41:53:-211.4:211.4
20	55586393	886095:2	A	A]20:55583060]	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=886095:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:55583060(+)-20:55586393(+)__20_55566001_55591001D;SPAN=3333;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:58:71:6.5:171.5,0,6.5:0:58:-180.6:180.6
20	55808995	948815:1	T	]X:155159534]T	66	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=948815:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:55808995(-)-23:155159534(+)__23_155158501_155183501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:17:6:66,6,0:0:22:-66.02:66.02
20	55858690	886287:2	C	C[8:138020879[	22	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=886287:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_55835501_55860501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:39:22.1:22.1,0,74.9:6:8:-22.05:23.72
20	55859567	886298:1	G	G[20:55865561[	99	PASS	EVDNC=ASSMB;HOMSEQ=AATAAATTTGTGG;MAPQ=60;MATEID=886298:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_20_55860001_55885001_11C;SPAN=5994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:60:63:17.4:191.4,17.4,0:60:0:-191.4:191.4
20	55865561	886298:2	A	]20:55859567]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AATAAATTTGTGG;MAPQ=60;MATEID=886298:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_20_55860001_55885001_11C;SPAN=5994;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:60:63:17.4:191.4,17.4,0:60:0:-191.4:191.4
20	56814070	886767:1	T	T[20:56815236[	5	PASS	EVDNC=ASSMB;HOMSEQ=TTTGAGACAGAGTCT;MAPQ=60;MATEID=886767:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_56791001_56816001_0C;SPAN=1166;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:76:5.3:5.3,0,183.5:8:0:-5.045:15.57
20	56815236	886767:2	T	]20:56814070]T	5	PASS	EVDNC=ASSMB;HOMSEQ=TTTGAGACAGAGTCT;MAPQ=60;MATEID=886767:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_56791001_56816001_0C;SPAN=1166;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:76:5.3:5.3,0,183.5:8:0:-5.045:15.57
20	56932721	887899:1	A	[20:59474085[A	30	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=887899:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_12C;SPAN=2541364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:56:30.5:30.5,0,109.7:10:7:-30.47:33.03
20	57100409	886924:2	C	]17:62965942]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=886924:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_57085001_57110001_84C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:48:156:99:114.8,0,276.5:48:0:-114.6:118.4
20	57108067	57774:2	A	[1:214639551[A	62	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GTAG;MAPQ=60;MATEID=57774:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_214620001_214645001_13C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:21:5.7:62.7,5.7,0:14:9:-62.72:62.72
20	57243066	881086:2	G	[20:42187003[G	99	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=881086:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42164501_42189501_4C;SPAN=15056063;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:35:50:22.4:101.6,0,22.4:17:25:-104.1:104.1
20	57463311	886988:2	T	]11:43634621]T	22	PASS	EVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=886988:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57452501_57477501_4C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98
20	57974892	998965:1	C	C[Un_JTFH01000734v1_decoy:1[	93	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=998965:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=TCATCA;SCTG=c_1577_1_1214_0C;SPAN=-1;SUBN=3;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:11:10.7:93.6,10.7,0:39:0:-93.64:93.64
20	57997438	887220:2	A	]16:25844053]A	16	PASS	EVDNC=ASSMB;INSERTION=ACTCCAGCAGTTATGTACTATATATATATAT;MAPQ=60;MATEID=887220:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57991501_58016501_94C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77
20	58273305	887352:2	A	A[17:69309485[	15	PASS	EVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=887352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58261001_58286001_61C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78
20	58411089	887423:2	T	]1:198411139]T	7	PASS	EVDNC=ASSMB;INSERTION=AAGAAAC;MAPQ=60;MATEID=887423:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58408001_58433001_70C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:68:7.4:7.4,0,162.5:8:0:-7.294:15.98
20	58493483	887457:1	T	T]X:142905838]	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=887457:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_58481501_58506501_64C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:59:26.3:26.3,0,122:11:2:-26.33:29.85
20	58564979	887490:1	C	C[20:58565296[	0	PASS	EVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=887490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58555001_58580001_7C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:104:6:0,6,273.9:7:0:6.127:12.2
20	58565296	887490:2	C	]20:58564979]C	0	PASS	EVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=887490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58555001_58580001_7C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:104:6:0,6,273.9:7:0:6.127:12.2
20	59000016	887724:1	C	C[20:59000298[	0	PASS	EVDNC=ASSMB;HOMSEQ=AACCCGGGAGGCGGAGGTTGCAGTGAGC;MAPQ=60;MATEID=887724:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_20_58996001_59021001_31C;SPAN=282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:94:6.3:0,6.3,247.5:6:0:6.617:10.32
20	59000298	887724:2	A	]20:59000016]A	0	PASS	EVDNC=ASSMB;HOMSEQ=AACCCGGGAGGCGGAGGTTGCAGTGAGC;MAPQ=60;MATEID=887724:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_20_58996001_59021001_31C;SPAN=282;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:94:6.3:0,6.3,247.5:6:0:6.617:10.32
20	59473634	887898:2	C	[17:48813086[C	13	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=887898:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_31C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:48:13.1:13.1,0,105.5:4:6:-12.92:17.28
20	59474085	887899:2	T	[20:56932721[T	30	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=887899:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_12C;SPAN=2541364;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:56:30.5:30.5,0,109.7:10:7:-30.47:33.03
20	59554986	887941:1	G	G[20:59640392[	21	PASS	EVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=887941:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59535001_59560001_9C;SPAN=85406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:9:0:-21.28:22.07
20	59640392	887941:2	C	]20:59554986]C	21	PASS	EVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=887941:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59535001_59560001_9C;SPAN=85406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:30:21.2:21.2,0,54.2:9:0:-21.28:22.07
20	60270342	888229:2	T	[17:61210341[T	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TGTG;MAPQ=60;MATEID=888229:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60270001_60295001_15C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:97:155:99:276.8,0,111.8:59:56:-280.3:280.3
20	60314398	888245:1	T	]20:60314900]T	4	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=888245:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:60314398(-)-20:60314900(+)__20_60294501_60319501D;SPAN=502;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:80:4.1:4.1,0,195.5:0:8:-3.921:15.38
20	60314900	888245:2	C	C[20:60314398[	4	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=888245:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:60314398(-)-20:60314900(+)__20_60294501_60319501D;SPAN=502;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:80:4.1:4.1,0,195.5:0:8:-3.921:15.38
20	60621324	888361:1	A	A[20:60622238[	0	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=888361:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60613001_60638001_18C;SPAN=914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:85:3.9:0,3.9,221.1:6:0:4.087:10.59
20	60622238	888361:2	A	]20:60621324]A	0	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=888361:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60613001_60638001_18C;SPAN=914;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:6:85:3.9:0,3.9,221.1:6:0:4.087:10.59
20	61007224	888548:1	A	A[20:61030462[	24	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=888548:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_61029501_61054501_3C;SPAN=23238;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:42:24.5:24.5,0,80.6:11:0:-24.51:26.21
20	61030462	888548:2	C	]20:61007224]C	24	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=888548:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_61029501_61054501_3C;SPAN=23238;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:42:24.5:24.5,0,80.6:11:0:-24.51:26.21
20	61329284	888678:1	T	]20:61329445]T	99	PASS	EVDNC=ASSMB;INSERTION=TCGTGGGTCTGGGACGCGGGTCGAGGTGGC;MAPQ=60;MATEID=888678:2;MATENM=2;NM=5;NUMPARTS=2;SCTG=c_20_61323501_61348501_127C;SPAN=161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:151:99:99.5,0,281:43:0:-99.5:104.3
20	61329445	888678:2	C	C[20:61329284[	99	PASS	EVDNC=ASSMB;INSERTION=TCGTGGGTCTGGGACGCGGGTCGAGGTGGC;MAPQ=60;MATEID=888678:1;MATENM=5;NM=2;NUMPARTS=2;SCTG=c_20_61323501_61348501_127C;SPAN=161;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:43:151:99:99.5,0,281:43:0:-99.5:104.3
20	61337291	888671:2	A	]1:7429774]A	16	PASS	DISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=888671:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:7429774(+)-20:61337291(-)__20_61323501_61348501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:59:16.4:16.4,0,131.9:0:10:-16.43:21.68
20	61529111	810968:2	A	A]17:62660892]	60	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=810968:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:62660892(+)-20:61529111(+)__17_62646501_62671501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:32:17.6:60.5,0,17.6:0:21:-61.42:61.42
20	61945453	889051:1	G	]20:61946491]G	28	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=889051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:61945453(-)-20:61946491(+)__20_61936001_61961001D;SPAN=1038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
20	61946491	889051:2	G	G[20:61945453[	28	PASS	DISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=889051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:61945453(-)-20:61946491(+)__20_61936001_61961001D;SPAN=1038;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43
20	62169401	889179:1	T	T]20:62211164]	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=889179:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:62169401(+)-20:62211164(+)__20_62205501_62230501D;SPAN=41763;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
20	62201797	889168:2	T	[20:51569452[T	24	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATC;MAPQ=60;MATEID=889168:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_62181001_62206001_66C;SPAN=10632345;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:31:24.5:24.5,0,50.9:7:8:-24.3:24.91
20	62211164	889179:2	C	C]20:62169401]	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=889179:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:62169401(+)-20:62211164(+)__20_62205501_62230501D;SPAN=41763;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42
21	6070645	891075:2	T	T]1:248752958]	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=891075:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:248752958(+)-21:6070645(+)__21_6051501_6076501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:2:2.4:26.4,2.4,0:0:9:-26.41:26.41
21	6374495	891103:1	G	G[21:6374996[	52	PASS	DISC_MAPQ=16;EVDNC=ASDIS;INSERTION=AGGGGCT;MAPQ=16;MATEID=891103:2;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_21_6370001_6395001_27C;SPAN=501;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:60:52.4:52.4,0,98.6:15:8:-52.46:53.23
21	6374996	891103:2	C	]21:6374495]C	52	PASS	DISC_MAPQ=10;EVDNC=ASDIS;INSERTION=AGGGGCT;MAPQ=44;MATEID=891103:1;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_21_6370001_6395001_27C;SPAN=501;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:60:52.4:52.4,0,98.6:15:8:-52.46:53.23
21	7957991	892538:2	C	C[20:28728974[	26	PASS	DISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=892538:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28728974(-)-21:7957991(+)__21_7938001_7963001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:81:26.9:26.9,0,175.4:0:15:-26.75:33.16
21	7969771	892860:2	G	[13:16013417[G	20	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=892860:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013417(-)-21:7969771(-)__21_7962501_7987501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36
21	9008766	893297:1	C	C[21:9019038[	28	PASS	EVDNC=ASSMB;INSERTION=ACACAATGGACAATG;MAPQ=60;MATEID=893297:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_9016001_9041001_175C;SPAN=10272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
21	9012539	893275:1	C	C[21:9015175[	29	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=893275:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:9012539(+)-21:9015175(-)__21_8991501_9016501D;SPAN=2636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:73:29:29,0,154.4:0:15:-29:33.92
21	9015175	893275:2	T	]21:9012539]T	29	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=893275:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:9012539(+)-21:9015175(-)__21_8991501_9016501D;SPAN=2636;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:73:29:29,0,154.4:0:15:-29:33.92
21	9019038	893297:2	G	]21:9008766]G	28	PASS	EVDNC=ASSMB;INSERTION=ACACAATGGACAATG;MAPQ=44;MATEID=893297:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_9016001_9041001_175C;SPAN=10272;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
21	9997182	894173:1	G	G[21:9997486[	38	PASS	DISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=AGATAATGCAGTAAGG;MAPQ=60;MATEID=894173:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_9996001_10021001_249C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:29:34.7:38,0,34.7:4:10:-38.07:38.07
21	9997486	894173:2	A	]21:9997182]A	38	PASS	DISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=AGATAATGCAGTAAGG;MAPQ=60;MATEID=894173:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_9996001_10021001_249C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:29:34.7:38,0,34.7:4:10:-38.07:38.07
21	10271538	894303:1	A	[21:10324402[A	36	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=894303:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10271538(-)-21:10324402(-)__21_10265501_10290501D;SPAN=52864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
21	10324402	894303:2	C	[21:10271538[C	36	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=894303:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10271538(-)-21:10324402(-)__21_10265501_10290501D;SPAN=52864;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
21	10489827	895070:1	G	]22:45595928]G	35	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=895070:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10489827(-)-22:45595928(+)__21_10486001_10511001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63
21	10543018	895113:1	T	T[21:10543301[	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGACTGTATTCTTTT;MAPQ=60;MATEID=895113:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10535001_10560001_101C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:28:13.5:148.5,13.5,0:49:0:-148.5:148.5
21	10543301	895113:2	C	]21:10543018]C	99	PASS	EVDNC=ASSMB;HOMSEQ=CTGACTGTATTCTTTT;MAPQ=60;MATEID=895113:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10535001_10560001_101C;SPAN=283;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:49:28:13.5:148.5,13.5,0:49:0:-148.5:148.5
21	10571807	895138:1	G	G[21:10572230[	0	PASS	EVDNC=ASSMB;HOMSEQ=ACTTGAGGCCAGGAGTTCAAG;MAPQ=60;MATEID=895138:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10559501_10584501_196C;SPAN=423;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:78:8.4:0,8.4,211.2:4:0:8.721:6.488
21	10572230	895138:2	A	]21:10571807]A	0	PASS	EVDNC=ASSMB;HOMSEQ=ACTTGAGGCCAGGAGTTCAAG;MAPQ=60;MATEID=895138:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10559501_10584501_196C;SPAN=423;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:4:78:8.4:0,8.4,211.2:4:0:8.721:6.488
21	10664259	895599:1	T	T[21:10664824[	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCCATTCCATTGCATTCCATTCCATT;MAPQ=60;MATEID=895599:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_21_10657501_10682501_180C;SPAN=565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:117:9.6:0,9.6,313.5:7:0:9.781:11.83
21	10664824	895599:2	G	]21:10664259]G	0	PASS	EVDNC=ASSMB;HOMSEQ=GAGTCCATTCCATTGCATTCCATTCCATT;MAPQ=60;MATEID=895599:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_21_10657501_10682501_180C;SPAN=565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:117:9.6:0,9.6,313.5:7:0:9.781:11.83
21	10722194	896148:1	T	T[21:10728890[	0	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=896148:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10722194(+)-21:10728890(-)__21_10706501_10731501D;SPAN=6696;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:161:15.4:0,15.4,435.7:0:9:15.55:14.94
21	10728890	896148:2	T	]21:10722194]T	0	PASS	DISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=896148:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10722194(+)-21:10728890(-)__21_10706501_10731501D;SPAN=6696;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:9:161:15.4:0,15.4,435.7:0:9:15.55:14.94
21	10789057	896677:2	T	T[13:16016553[	82	PASS	DISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=GAAGCATTCTGAGAAACTTCTTT;MAPQ=56;MATEID=896677:1;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_21_10780001_10805001_326C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:95:82.4:82.4,0,155:11:22:-82.23:83.51
21	10798083	896709:2	T	[20:28757851[T	0	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=896709:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28757851(-)-21:10798083(-)__21_10780001_10805001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:8:151:16:0,16,412.6:0:8:16.04:13.09
21	10807278	896848:1	T	T[21:10807788[	0	PASS	DISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=TTCT;MAPQ=60;MATEID=896848:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_10804501_10829501_120C;SPAN=510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:242:28:0,28,663.4:12:4:28.41:19.29
21	10807788	896848:2	T	]21:10807278]T	0	PASS	DISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=TTCT;MAPQ=27;MATEID=896848:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_10804501_10829501_120C;SPAN=510;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:12:242:28:0,28,663.4:12:4:28.41:19.29
21	13444519	897143:1	T	T[21:13445846[	52	PASS	EVDNC=ASSMB;INSERTION=AAGTGCTACTACT;MAPQ=60;MATEID=897143:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_21_13426001_13451001_46C;SPAN=1327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81
21	13445846	897143:2	A	]21:13444519]A	52	PASS	EVDNC=ASSMB;INSERTION=AAGTGCTACTACT;MAPQ=60;MATEID=897143:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_21_13426001_13451001_46C;SPAN=1327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81
21	17240014	898019:1	A	A[21:17241316[	46	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=898019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_17223501_17248501_5C;SPAN=1302;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21
21	17241316	898019:2	A	]21:17240014]A	46	PASS	EVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=898019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_17223501_17248501_5C;SPAN=1302;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21
21	18857736	898387:2	C	]4:76427327]C	23	PASS	DISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=898387:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:76427327(+)-21:18857736(-)__21_18840501_18865501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49
21	21235316	899250:1	A	]21:21423970]A	91	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=899250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21413001_21438001_26C;SPAN=188654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:63:65:91.4,0,65:33:0:-91.41:91.41
21	21252378	899423:1	T	]21:22048768]T	19	PASS	DISC_MAPQ=255;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=899423:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_22025501_22050501_1C;SPAN=796390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:3:4:-19.89:19.89
21	21279138	899260:1	A	]21:21438423]A	99	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=899260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21437501_21462501_20C;SPAN=159285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:39:10.8:118.8,10.8,0:39:0:-118.8:118.8
21	21325912	899202:1	T	]21:21578930]T	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=899202:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21315001_21340001_25C;SPAN=253018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:61:19.4:19.4,0,131.6:8:4:-19.16:24.18
21	21423970	899250:2	C	C[21:21235316[	91	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=899250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21413001_21438001_26C;SPAN=188654;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:33:63:65:91.4,0,65:33:0:-91.41:91.41
21	21438423	899260:2	G	G[21:21279138[	99	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=899260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21437501_21462501_20C;SPAN=159285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:39:39:10.8:118.8,10.8,0:39:0:-118.8:118.8
21	21461680	899338:1	T	]21:21629146]T	59	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=899338:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21609001_21634001_13C;SPAN=167466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:18:5.4:59.4,5.4,0:20:0:-59.41:59.41
21	21578930	899202:2	T	T[21:21325912[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=899202:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21315001_21340001_25C;SPAN=253018;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:61:19.4:19.4,0,131.6:8:4:-19.16:24.18
21	21629146	899338:2	C	C[21:21461680[	59	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=899338:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21609001_21634001_13C;SPAN=167466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:18:5.4:59.4,5.4,0:20:0:-59.41:59.41
21	22048768	899423:2	A	A[21:21252378[	19	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=899423:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_22025501_22050501_1C;SPAN=796390;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:12:9.8:19.7,0,9.8:3:4:-19.89:19.89
21	24391796	900120:1	A	A]21:24391873]	29	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=A;MAPQ=60;MATEID=900120:2;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_21_24377501_24402501_17C;SPAN=77;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
21	24391873	900120:2	T	T]21:24391796]	29	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=A;MAPQ=60;MATEID=900120:1;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_21_24377501_24402501_17C;SPAN=77;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
21	26001844	900591:1	T	[21:26002386[T	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGATCCA;MAPQ=60;MATEID=900591:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_21_25994501_26019501_0C;SPAN=542;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:30:9.6:105.6,9.6,0:27:25:-105.6:105.6
21	26002386	900591:2	G	[21:26001844[G	99	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGATCCA;MAPQ=60;MATEID=900591:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_21_25994501_26019501_0C;SPAN=542;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:35:30:9.6:105.6,9.6,0:27:25:-105.6:105.6
21	26236436	900686:1	T	]21:26285100]T	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=900686:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:26236436(-)-21:26285100(+)__21_26264001_26289001D;SPAN=48664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
21	26285100	900686:2	T	T[21:26236436[	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=900686:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:26236436(-)-21:26285100(+)__21_26264001_26289001D;SPAN=48664;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89
21	31508958	902161:1	C	]21:31616501]C	25	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=CG;MAPQ=60;MATEID=902161:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_31605001_31630001_6C;SPAN=107543;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:7:8:-25.74:25.74
21	31616501	902161:2	G	G[21:31508958[	25	PASS	DISC_MAPQ=59;EVDNC=ASDIS;INSERTION=CG;MAPQ=60;MATEID=902161:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_31605001_31630001_6C;SPAN=107543;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:15:12.2:25.4,0,12.2:7:8:-25.74:25.74
21	34817147	902939:1	T	]21:34863048]T	92	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=902939:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_34839001_34864001_12C;SPAN=45901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:31:0:-92.42:92.42
21	34863048	902939:2	C	C[21:34817147[	92	PASS	EVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=902939:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_34839001_34864001_12C;SPAN=45901;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:21:8.4:92.4,8.4,0:31:0:-92.42:92.42
21	38009271	903694:2	G	[20:53882695[G	85	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=903694:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_37999501_38024501_1C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:28:22:7.8:85.8,7.8,0:14:18:-85.82:85.82
21	38913836	904003:2	A	[6:169996908[A	99	PASS	DISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=904003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_38906001_38931001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:66:51:18.3:201.3,18.3,0:61:10:-201.3:201.3
21	40028389	904491:1	T	[21:40033586[T	49	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=904491:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:40028389(-)-21:40033586(-)__21_40033001_40058001D;SPAN=5197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34
21	40033586	904491:2	T	[21:40028389[T	49	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=904491:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:40028389(-)-21:40033586(-)__21_40033001_40058001D;SPAN=5197;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34
21	40348105	904567:1	A	]21:40348511]A	52	PASS	DISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=ATCAGCCACATTATTGCAATCATACCCCATACAGTTCCTATCAGCCACATTATTGCA;MAPQ=60;MATEID=904567:2;MATENM=12;NM=8;NUMPARTS=2;SCTG=c_21_40327001_40352001_0C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:72:52.4:52.4,0,128.3:17:5:-52.38:54.17
21	40348511	904567:2	A	A[21:40348105[	52	PASS	DISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=ATCAGCCACATTATTGCAATCATACCCCATACAGTTCCTATCAGCCACATTATTGCA;MAPQ=60;MATEID=904567:1;MATENM=8;NM=12;NUMPARTS=2;SCTG=c_21_40327001_40352001_0C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:72:52.4:52.4,0,128.3:17:5:-52.38:54.17
21	41805882	905116:1	C	]21:41806838]C	52	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CCTCCATCACTATCATTACCCTCATCACCACCA;MAPQ=60;MATEID=905116:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_41797001_41822001_60C;SPAN=956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:19:2:-51.89:52.86
21	41806838	905116:2	A	A[21:41805882[	52	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=CCTCCATCACTATCATTACCCTCATCACCACCA;MAPQ=60;MATEID=905116:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_41797001_41822001_60C;SPAN=956;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:62:52.1:52.1,0,101.6:19:2:-51.89:52.86
21	41930128	905195:1	C	C[21:41933376[	99	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=905195:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:41930128(+)-21:41933376(-)__21_41919501_41944501D;SPAN=3248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:61:12:16.8:184.8,16.8,0:0:61:-184.8:184.8
21	41933376	905195:2	A	]21:41930128]A	99	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=905195:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:41930128(+)-21:41933376(-)__21_41919501_41944501D;SPAN=3248;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:61:12:16.8:184.8,16.8,0:0:61:-184.8:184.8
21	42994295	905513:1	G	]Un_JTFH01000298v1_decoy:2143]G	82	PASS	EVDNC=ASSMB;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAT;MAPQ=60;MATEID=905513:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_21_42973001_42998001_53C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:23:7.5:82.5,7.5,0:27:0:-82.52:82.52
21	44573789	905904:1	A	]21:44600671]A	19	PASS	DISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=905904:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:44573789(-)-21:44600671(+)__21_44565501_44590501D;SPAN=26882;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89
21	44600671	905904:2	G	G[21:44573789[	19	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=905904:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:44573789(-)-21:44600671(+)__21_44565501_44590501D;SPAN=26882;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89
21	44817900	906030:1	C	]21:45021320]C	45	PASS	EVDNC=ASSMB;INSERTION=ACAGCTCCAAGGGCCGCAGGAGCGGCGCGCGGCGGCGGAGGCGCC;MAPQ=60;MATEID=906030:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_45006501_45031501_13C;SPAN=203420;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5
21	45021320	906030:2	G	G[21:44817900[	45	PASS	EVDNC=ASSMB;INSERTION=ACAGCTCCAAGGGCCGCAGGAGCGGCGCGCGGCGGCGGAGGCGCC;MAPQ=60;MATEID=906030:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_45006501_45031501_13C;SPAN=203420;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5
21	45156011	906060:1	C	]21:45156432]C	34	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=906060:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_21_45153501_45178501_9C;SPAN=421;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:5:10:-35.24:35.24
21	45156432	906060:2	C	C[21:45156011[	34	PASS	DISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=0;MATEID=906060:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_21_45153501_45178501_9C;SPAN=421;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:18:8.3:34.7,0,8.3:5:10:-35.24:35.24
21	46289897	906534:1	G	]21:46290060]G	58	PASS	EVDNC=ASSMB;HOMSEQ=GTGTAAGGTTGTCATAGCCTTTGT;MAPQ=60;MATEID=906534:2;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_21_46280501_46305501_61C;SPAN=163;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:74:58.4:58.4,0,127.7:24:0:-58.42:59.85
21	46290060	906534:2	T	T[21:46289897[	58	PASS	EVDNC=ASSMB;HOMSEQ=GTGTAAGGTTGTCATAGCCTTTGT;MAPQ=59;MATEID=906534:1;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_21_46280501_46305501_61C;SPAN=163;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:24:74:58.4:58.4,0,127.7:24:0:-58.42:59.85
21	46359215	906568:1	A	A[21:46359740[	99	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAA;MAPQ=60;MATEID=906568:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_46354001_46379001_3C;SPAN=525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:14:12.3:135.3,12.3,0:28:29:-135.3:135.3
21	46359740	906568:2	G	]21:46359215]G	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAA;MAPQ=60;MATEID=906568:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_46354001_46379001_3C;SPAN=525;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:44:14:12.3:135.3,12.3,0:28:29:-135.3:135.3
21	46382911	906579:1	T	]21:46384131]T	45	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=906579:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:46382911(-)-21:46384131(+)__21_46378501_46403501D;SPAN=1220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:62:45.5:45.5,0,108.2:0:19:-45.29:46.81
21	46384131	906579:2	C	C[21:46382911[	45	PASS	DISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=906579:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:46382911(-)-21:46384131(+)__21_46378501_46403501D;SPAN=1220;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:19:62:45.5:45.5,0,108.2:0:19:-45.29:46.81
22	10717767	907105:1	T	T[22:10722199[	62	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=907105:2;MATENM=10;NM=23;NUMPARTS=2;REPSEQ=GTGT;SCTG=c_22_10706501_10731501_617C;SECONDARY;SPAN=4432;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:82:62.9:62.9,0,142.1:13:13:-62.78:64.53
22	10722199	907105:2	T	]22:10717767]T	62	PASS	DISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=0;MATEID=907105:1;MATENM=23;NM=10;NUMPARTS=2;REPSEQ=GTGT;SCTG=c_22_10706501_10731501_617C;SECONDARY;SPAN=4432;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:26:82:62.9:62.9,0,142.1:13:13:-62.78:64.53
22	10726871	907286:1	A	A[22:10728283[	76	PASS	EVDNC=ASSMB;HOMSEQ=ATTCCATTCCATTCGA;MAPQ=60;MATEID=907286:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_22_10706501_10731501_274C;SPAN=1412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:70:76.1:76.1,0,99.2:29:0:-76.05:76.24
22	10728262	907316:1	C	C[22:10729335[	29	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=907316:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10728262(+)-22:10729335(-)__22_10706501_10731501D;SPAN=1073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:96:29.3:29.3,0,210.8:0:17:-29.13:37.22
22	10728283	907286:2	A	]22:10726871]A	76	PASS	EVDNC=ASSMB;HOMSEQ=ATTCCATTCCATTCGA;MAPQ=60;MATEID=907286:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_22_10706501_10731501_274C;SPAN=1412;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:70:76.1:76.1,0,99.2:29:0:-76.05:76.24
22	10729335	907316:2	T	]22:10728262]T	29	PASS	DISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=907316:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10728262(+)-22:10729335(-)__22_10706501_10731501D;SPAN=1073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:96:29.3:29.3,0,210.8:0:17:-29.13:37.22
22	10739861	907396:2	C	]10:125894203]C	44	PASS	DISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=907396:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125894203(+)-22:10739861(-)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:20:75:44.9:44.9,0,143.9:0:20:-44.94:47.83
22	10740444	907451:1	A	A[22:10746352[	32	PASS	DISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=907451:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10740444(+)-22:10746352(-)__22_10731001_10756001D;SPAN=5908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:51:32:32,0,94.7:0:14:-31.88:33.69
22	10741540	907397:2	G	G[10:125895950[	25	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=907397:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125895950(-)-22:10741540(+)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35
22	10746352	907451:2	G	]22:10740444]G	32	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=907451:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10740444(+)-22:10746352(-)__22_10731001_10756001D;SPAN=5908;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:51:32:32,0,94.7:0:14:-31.88:33.69
22	11031172	907897:1	G	G[22:11032168[	79	PASS	EVDNC=ASSMB;INSERTION=CCACAA;MAPQ=60;MATEID=907897:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_22_11025001_11050001_283C;SPAN=996;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:71:79.1:79.1,0,98.9:30:0:-79.07:79.2
22	11032168	907897:2	A	]22:11031172]A	79	PASS	EVDNC=ASSMB;INSERTION=CCACAA;MAPQ=60;MATEID=907897:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_22_11025001_11050001_283C;SPAN=996;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:30:71:79.1:79.1,0,98.9:30:0:-79.07:79.2
22	11317848	949339:1	T	[Y:10134946[T	66	PASS	DISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GAAACTAAAAGATTTTTAATATATAAGGTTATGTCATCTGCAAACAGATA;MAPQ=45;MATEID=949339:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_24_10118501_10143501_145C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:8:6:66,6,0:15:7:-66.02:66.02
22	11373695	908592:2	G	G[20:29851924[	61	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAG;MAPQ=60;MATEID=908592:1;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_22_11368001_11393001_16C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:22:41:41.3:61.1,0,41.3:9:14:-61.28:61.28
22	12698698	910274:1	A	A[22:12699025[	70	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=AAAAGAATAA;MAPQ=60;MATEID=910274:2;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_22_12691001_12716001_689C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:91:70.4:70.4,0,156.2:14:15:-70.15:72.05
22	12699025	910274:2	A	]22:12698698]A	70	PASS	DISC_MAPQ=36;EVDNC=ASDIS;HOMSEQ=AAAAGAATAA;MAPQ=60;MATEID=910274:1;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_22_12691001_12716001_689C;SPAN=327;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:29:91:70.4:70.4,0,156.2:14:15:-70.15:72.05
22	16034697	910884:1	A	]22:16034865]A	48	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=910884:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_16023001_16048001_164C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74
22	16034865	910884:2	A	A[22:16034697[	48	PASS	EVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=910884:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_16023001_16048001_164C;SPAN=168;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74
22	16080720	911037:1	T	T[22:16084271[	46	PASS	DISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=911037:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:16080720(+)-22:16084271(-)__22_16072001_16097001D;SPAN=3551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
22	16084271	911037:2	G	]22:16080720]G	46	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=911037:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:16080720(+)-22:16084271(-)__22_16072001_16097001D;SPAN=3551;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21
22	17289460	912428:1	C	C[22:17298219[	59	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=912428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17297001_17322001_39C;SPAN=8759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41
22	17298219	912428:2	C	]22:17289460]C	59	PASS	EVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=912428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17297001_17322001_39C;SPAN=8759;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41
22	17801149	912594:1	T	T[22:17801453[	15	PASS	EVDNC=ASSMB;HOMSEQ=TCCTGAGTTTCCTTTTTCT;MAPQ=60;MATEID=912594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17787001_17812001_113C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24
22	17801453	912594:2	T	]22:17801149]T	15	PASS	EVDNC=ASSMB;HOMSEQ=TCCTGAGTTTCCTTTTTCT;MAPQ=60;MATEID=912594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17787001_17812001_113C;SPAN=304;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24
22	18036248	912659:1	T	]22:18077776]T	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCCTCCATTAACATTAACAT;MAPQ=60;MATEID=912659:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_18056501_18081501_85C;SPAN=41528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:10:9:-42.91:42.91
22	18077776	912659:2	A	A[22:18036248[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCCTCCATTAACATTAACAT;MAPQ=60;MATEID=912659:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_18056501_18081501_85C;SPAN=41528;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:13:3.9:42.9,3.9,0:10:9:-42.91:42.91
22	19584096	913224:1	C	C[22:19585579[	92	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=52;MATEID=913224:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_22_19575501_19600501_112C;SPAN=1483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42
22	19585579	913224:2	C	]22:19584096]C	92	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=913224:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_22_19575501_19600501_112C;SPAN=1483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42
22	20075143	913386:1	G	]22:20075626]G	23	PASS	DISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=913386:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:20075143(-)-22:20075626(+)__22_20065501_20090501D;SPAN=483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:0:9:-22.96:23.15
22	20075626	913386:2	G	G[22:20075143[	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=913386:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:20075143(-)-22:20075626(+)__22_20065501_20090501D;SPAN=483;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:0:9:-22.96:23.15
22	22352809	914312:1	T	]22:22375955]T	28	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=914312:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:22352809(-)-22:22375955(+)__22_22368501_22393501D;SPAN=23146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
22	22375955	914312:2	A	A[22:22352809[	28	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=914312:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:22352809(-)-22:22375955(+)__22_22368501_22393501D;SPAN=23146;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08
22	23429471	914635:2	C	[7:1876939[C	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=914635:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:1876939(-)-22:23429471(-)__22_23422001_23447001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57
22	23558690	914724:1	A	A[22:23561043[	24	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=914724:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:23558690(+)-22:23561043(-)__22_23544501_23569501D;SPAN=2353;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:0:9:-24.09:24.09
22	23561043	914724:2	A	]22:23558690]A	24	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=914724:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:23558690(+)-22:23561043(-)__22_23544501_23569501D;SPAN=2353;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:20:24.2:24.2,0,24.2:0:9:-24.09:24.09
22	23683431	914791:1	G	G[22:23685352[	37	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=914791:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_23667001_23692001_69C;SPAN=1921;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93
22	23685352	914791:2	G	]22:23683431]G	37	PASS	EVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=914791:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_23667001_23692001_69C;SPAN=1921;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93
22	23853676	914841:2	T	[2:47582850[T	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=914841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_79C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:20:1.1:47.3,0,1.1:15:2:-49.48:49.48
22	23853754	914857:1	A	A[22:23856319[	61	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAAAA;MAPQ=60;MATEID=914857:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_23838501_23863501_51C;SPAN=2565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:29:11.6:61.1,0,11.6:21:0:-63.06:63.06
22	23856319	914857:2	G	]22:23853754]G	61	PASS	EVDNC=ASSMB;HOMSEQ=GAAAAAAA;MAPQ=60;MATEID=914857:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_51C;SPAN=2565;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:29:11.6:61.1,0,11.6:21:0:-63.06:63.06
22	23931957	914955:1	A	A[22:23969109[	52	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=914955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_23961001_23986001_4C;SPAN=37152;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:12:4.8:52.8,4.8,0:18:0:-52.81:52.81
22	23969109	914955:2	C	]22:23931957]C	52	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=914955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_23961001_23986001_4C;SPAN=37152;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:12:4.8:52.8,4.8,0:18:0:-52.81:52.81
22	25006973	915214:1	C	C[22:25007371[	28	PASS	EVDNC=ASSMB;INSERTION=AGGTTTTCGGGATT;MAPQ=60;MATEID=915214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_24990001_25015001_32C;SPAN=398;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
22	25007371	915214:2	A	]22:25006973]A	28	PASS	EVDNC=ASSMB;INSERTION=AGGTTTTCGGGATT;MAPQ=60;MATEID=915214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_24990001_25015001_32C;SPAN=398;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08
22	25178400	915247:2	T	]20:63640433]T	33	PASS	DISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=915247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:63640433(+)-22:25178400(-)__22_25161501_25186501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:10:3:33,3,0:0:11:-33.01:33.01
22	26772113	915762:1	T	T[22:26773830[	21	PASS	EVDNC=ASSMB;HOMSEQ=CTTAACCTCT;MAPQ=60;MATEID=915762:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_26754001_26779001_71C;SPAN=1717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23
22	26773830	915762:2	C	]22:26772113]C	21	PASS	EVDNC=ASSMB;HOMSEQ=CTTAACCTCT;MAPQ=60;MATEID=915762:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_26754001_26779001_71C;SPAN=1717;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23
22	28669436	916262:2	T	T[3:176189690[	6	PASS	EVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=916262:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_73C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:105:6.8:6.8,0,257.6:11:0:-6.796:21.38
22	28669457	699947:2	A	A[14:57720286[	19	PASS	EVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=699947:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_57697501_57722501_12C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73
22	28669458	916297:2	A	[14:57720286[A	18	PASS	DISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=CA;INSERTION=GTGACTGAATCCCAAAATTATATTGGTAACATGGAAATTCCTGATAGGGGAAGAATATTCCCAGAAGTGTGACCAGTTAGGGCCAAAATAAAAGGTA;MAPQ=60;MATEID=916297:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_22_28665001_28690001_91C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:111:18.5:18.5,0,259.4:15:2:-18.31:30.92
22	28669482	916278:2	T	T[7:111682701[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=916278:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_206C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/0:7:102:5.4:0,5.4,267.3:7:2:5.564:12.26
22	28669566	916274:2	A	A[7:52635403[	0	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=916274:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_38C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:117:0.2:0.2,0,293.9:10:0:-0.1223:18.51
22	28669594	916305:2	T	T[16:25806596[	0	PASS	EVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=916305:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_17C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:116:0.5:0.5,0,290.9:10:0:-0.4034:18.55
22	28669793	916311:2	A	]17:55763133]A	73	PASS	DISC_MAPQ=60;EVDNC=TSI_L;INSERTION=ACTAAGCAAATTATTTAAAATAATAATTTTAAAATAAAATGACTAAGCAAATTATTTAAAATAATAATTTGCTTAGTCATTTATTCA;MAPQ=60;MATEID=916311:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_22_28665001_28690001_87C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:34:138:73.7:73.7,0,271.7:34:5:-73.44:79.95
22	28669897	916271:2	A	]7:15965553]A	7	PASS	EVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=916271:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_80C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:103:7.4:7.4,0,251.6:11:0:-7.359:21.48
22	28669943	916313:2	T	T[17:55763576[	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916313:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:55763576(-)-22:28669943(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:71:26.3:26.3,0,151.7:0:14:-26.26:31.38
22	28669946	916294:2	A	A]13:107584405]	32	PASS	EVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=916294:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_142C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:72:32.6:32.6,0,148.1:16:0:-32.58:36.8
22	28669971	916269:2	C	C]5:98524537]	15	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916269:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:98524537(+)-22:28669971(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:74:15.5:15.5,0,170.6:0:11:-15.51:23.17
22	28673796	916320:1	A	[22:28674065[A	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=916320:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_181C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:8:7:-23.94:25.95
22	28674065	916320:2	A	[22:28673796[A	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=916320:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_181C;SPAN=269;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:44:23.9:23.9,0,86.6:8:7:-23.94:25.95
22	28674185	916288:2	C	C]13:71226063]	25	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916288:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:71226063(+)-22:28674185(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19
22	28827617	916360:1	A	]22:28839022]A	56	PASS	EVDNC=ASSMB;HOMSEQ=AGAC;MAPQ=60;MATEID=916360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28836501_28861501_18C;SPAN=11405;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78
22	28839022	916360:2	C	C[22:28827617[	56	PASS	EVDNC=ASSMB;HOMSEQ=AGAC;MAPQ=60;MATEID=916360:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28836501_28861501_18C;SPAN=11405;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78
22	30425970	916786:1	G	]22:30486433]G	33	PASS	EVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=916786:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_30478001_30503001_35C;SPAN=60463;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:11:3:33,3,0:10:0:-32.46:32.46
22	30486433	916786:2	A	A[22:30425970[	33	PASS	EVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=916786:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_30478001_30503001_35C;SPAN=60463;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:11:3:33,3,0:10:0:-32.46:32.46
22	32179921	917272:2	C	C[9:98712914[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=917272:1;MATENM=7;NM=1;NUMPARTS=3;SCTG=c_22_32168501_32193501_13C;SECONDARY;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:10:4.2:46.2,4.2,0:11:9:-46.21:46.21
22	32179925	917274:2	G	]9:98715302]G	62	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCATGGTGAGTCT;MAPQ=60;MATEID=917274:1;MATENM=35;NM=2;NUMPARTS=2;SCTG=c_22_32168501_32193501_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:21:10:5.7:62.7,5.7,0:19:7:-62.72:62.72
22	32899786	917609:1	C	C[22:32900091[	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAGGAAGTC;MAPQ=60;MATEID=917609:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_32879001_32904001_118C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81
22	32900091	917609:2	A	]22:32899786]A	52	PASS	EVDNC=ASSMB;HOMSEQ=AAAACAAGGAAGTC;MAPQ=60;MATEID=917609:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_32879001_32904001_118C;SPAN=305;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81
22	34322060	918200:1	A	[22:34474116[A	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCT;MAPQ=60;MATEID=918200:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_71C;SPAN=152056;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:19:5.1:56.1,5.1,0:16:7:-56.11:56.11
22	34474116	918200:2	T	[22:34322060[T	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCT;MAPQ=60;MATEID=918200:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_71C;SPAN=152056;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:19:5.1:56.1,5.1,0:16:7:-56.11:56.11
22	34476818	918199:2	T	T[2:240614048[	25	PASS	EVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=918199:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_39C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99
22	34664447	918283:1	A	A[22:34665282[	44	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=918283:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34643001_34668001_90C;SPAN=835;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
22	34665282	918283:2	A	]22:34664447]A	44	PASS	EVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=918283:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34643001_34668001_90C;SPAN=835;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23
22	35063008	918417:1	G	G[22:35063429[	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGGGGGC;MAPQ=60;MATEID=918417:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_22_35059501_35084501_25C;SPAN=421;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:9:11:-51.41:51.41
22	35063429	918417:2	A	]22:35063008]A	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGGGGGC;MAPQ=60;MATEID=918417:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_22_35059501_35084501_25C;SPAN=421;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:18:4.8:52.8,4.8,0:9:11:-51.41:51.41
22	35249223	918484:1	T	T[22:35250146[	46	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=918484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:35249223(+)-22:35250146(-)__22_35231001_35256001D;SPAN=923;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21
22	35250146	918484:2	C	]22:35249223]C	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=918484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:35249223(+)-22:35250146(-)__22_35231001_35256001D;SPAN=923;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21
22	36533059	918828:1	T	[22:36538235[T	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=918828:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_36529501_36554501_31C;SPAN=5176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:8:5:-34.32:34.32
22	36538235	918828:2	T	[22:36533059[T	34	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=918828:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_36529501_36554501_31C;SPAN=5176;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:20:14.3:34.1,0,14.3:8:5:-34.32:34.32
22	36747132	918917:1	T	T[22:36751852[	23	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTAGCT;MAPQ=60;MATEID=918917:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_36750001_36775001_21C;SPAN=4720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:4:2.1:23.1,2.1,0:5:6:-23.11:23.11
22	36751852	918917:2	A	]22:36747132]A	23	PASS	DISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AGTAGCT;MAPQ=60;MATEID=918917:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_36750001_36775001_21C;SPAN=4720;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:4:2.1:23.1,2.1,0:5:6:-23.11:23.11
22	37015985	919060:1	C	]22:37190824]C	42	PASS	EVDNC=ASSMB;HOMSEQ=CCA;MAPQ=60;MATEID=919060:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_37166501_37191501_89C;SPAN=174839;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91
22	37190824	919060:2	A	A[22:37015985[	42	PASS	EVDNC=ASSMB;HOMSEQ=CCA;MAPQ=60;MATEID=919060:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_37166501_37191501_89C;SPAN=174839;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91
22	42705458	920298:1	C	C[22:42706193[	42	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AAAATACAAAAAATTAGC;MAPQ=60;MATEID=920298:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_22_42703501_42728501_40C;SPAN=735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:2:13:-42.91:42.91
22	42706193	920298:2	A	]22:42705458]A	42	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=AAAATACAAAAAATTAGC;MAPQ=60;MATEID=920298:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_22_42703501_42728501_40C;SPAN=735;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:2:13:-42.91:42.91
22	44904504	920968:1	G	G[22:44904876[	38	PASS	EVDNC=ASSMB;INSERTION=GGTATAAAATACTGAGTTGGCAGTG;MAPQ=60;MATEID=920968:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_44884001_44909001_62C;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
22	44904876	920968:2	A	]22:44904504]A	38	PASS	EVDNC=ASSMB;INSERTION=GGTATAAAATACTGAGTTGGCAGTG;MAPQ=60;MATEID=920968:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_44884001_44909001_62C;SPAN=372;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65
22	45349456	921146:1	C	C[22:45350365[	33	PASS	EVDNC=ASSMB;HOMSEQ=CCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGC;MAPQ=60;MATEID=921146:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_45325001_45350001_48C;SPAN=909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:11:0:-33.01:33.01
22	45349559	921149:1	C	]22:45350566]C	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCCTGACCTTGTGATCTGCCTGCCTCGGCCTCCCATAGTGCTGGGATTACAGGCGTGAGCCACCG;MAPQ=60;MATEID=921149:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_45349501_45374501_67C;SPAN=1007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:13:5.1:56.1,5.1,0:14:8:-56.11:56.11
22	45350365	921146:2	C	]22:45349456]C	33	PASS	EVDNC=ASSMB;HOMSEQ=CCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGC;MAPQ=60;MATEID=921146:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_45325001_45350001_48C;SPAN=909;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:3:3:33,3,0:11:0:-33.01:33.01
22	45350566	921149:2	G	G[22:45349559[	56	PASS	DISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=CTCCTGACCTTGTGATCTGCCTGCCTCGGCCTCCCATAGTGCTGGGATTACAGGCGTGAGCCACCG;MAPQ=60;MATEID=921149:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_45349501_45374501_67C;SPAN=1007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:13:5.1:56.1,5.1,0:14:8:-56.11:56.11
22	45479153	921203:1	T	T[22:45479470[	22	PASS	EVDNC=ASSMB;HOMSEQ=TATTATAAATTTTT;MAPQ=60;MATEID=921203:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_45472001_45497001_108C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:9:0:-22.4:22.76
22	45479470	921203:2	T	]22:45479153]T	22	PASS	EVDNC=ASSMB;HOMSEQ=TATTATAAATTTTT;MAPQ=60;MATEID=921203:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_45472001_45497001_108C;SPAN=317;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:26:22.4:22.4,0,42.2:9:0:-22.4:22.76
22	45595928	895070:2	G	G[21:10489827[	35	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=895070:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10489827(-)-22:45595928(+)__21_10486001_10511001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63
22	46026671	921353:1	C	]22:46027582]C	15	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=921353:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_46011001_46036001_9C;SPAN=911;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51
22	46027582	921353:2	C	C[22:46026671[	15	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=921353:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_46011001_46036001_9C;SPAN=911;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51
22	47300719	921635:1	G	G[22:47301110[	42	PASS	EVDNC=ASSMB;HOMSEQ=AGGAAG;MAPQ=60;MATEID=921635:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47285001_47310001_39C;SPAN=391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
22	47301110	921635:2	A	]22:47300719]A	42	PASS	EVDNC=ASSMB;HOMSEQ=AGGAAG;MAPQ=60;MATEID=921635:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47285001_47310001_39C;SPAN=391;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91
22	47386239	921681:1	T	T[22:47386455[	19	PASS	EVDNC=ASSMB;INSERTION=TGTAG;MAPQ=60;MATEID=921681:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47383001_47408001_54C;SPAN=216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19
22	47386455	921681:2	C	]22:47386239]C	19	PASS	EVDNC=ASSMB;INSERTION=TGTAG;MAPQ=60;MATEID=921681:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47383001_47408001_54C;SPAN=216;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19
22	49029656	922294:2	T	T[2:85486995[	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=922294:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_49024501_49049501_90C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:7:2.4:26.4,2.4,0:7:4:-26.41:26.41
22	49205551	922378:1	A	]22:49205666]A	17	PASS	EVDNC=ASSMB;HOMSEQ=ACCTCCAT;MAPQ=60;MATEID=922378:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_49196001_49221001_12C;SPAN=115;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
22	49205666	922378:2	T	T[22:49205551[	17	PASS	EVDNC=ASSMB;HOMSEQ=ACCTCCAT;MAPQ=60;MATEID=922378:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_49196001_49221001_12C;SPAN=115;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74
22	49226612	922392:1	C	]22:49228522]C	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=922392:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:49226612(-)-22:49228522(+)__22_49220501_49245501D;SPAN=1910;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36
22	49228522	922392:2	G	G[22:49226612[	21	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=922392:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:49226612(-)-22:49228522(+)__22_49220501_49245501D;SPAN=1910;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36
X	522245	923061:1	T	]X:522610]T	5	PASS	DISC_MAPQ=11;EVDNC=TSI_L;HOMSEQ=TTTCTTTCTTTCTCTTTCTTTCTTTT;MAPQ=53;MATEID=923061:2;MATENM=52;NM=0;NUMPARTS=4;REPSEQ=TTCTTTCTTTCT;SCTG=c_23_514501_539501_70C;SPAN=365;SUBN=2;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:5:5,0,16:5:5:-4.711:5.41
X	522610	923061:2	T	T[X:522245[	5	PASS	DISC_MAPQ=14;EVDNC=TSI_L;HOMSEQ=TTTCTTTCTTTCTCTTTCTTTCTTTT;MAPQ=36;MATEID=923061:1;MATENM=0;NM=52;NUMPARTS=4;REPSEQ=TTCTTTCTTTCT;SCTG=c_23_514501_539501_70C;SPAN=365;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:28:5:5,0,16:5:5:-4.711:5.41
X	700223	923242:1	C	C[X:700508[	6	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATGACAGGC;MAPQ=60;MATEID=923242:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_686001_711001_13C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:24:6.5:6.5,0,52.7:4:0:-6.458:8.642
X	700508	923242:2	G	]X:700223]G	6	PASS	EVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATGACAGGC;MAPQ=60;MATEID=923242:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_686001_711001_13C;SPAN=285;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:4:24:6.5:6.5,0,52.7:4:0:-6.458:8.642
X	1083702	923494:1	C	C[X:1084699[	52	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=923494:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:1083702(+)-23:1084699(-)__23_1078001_1103001D;SPAN=997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:2:4.8:52.8,4.8,0:0:18:-52.81:52.81
X	1084699	923494:2	A	]X:1083702]A	52	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=923494:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:1083702(+)-23:1084699(-)__23_1078001_1103001D;SPAN=997;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:2:4.8:52.8,4.8,0:0:18:-52.81:52.81
X	2277183	924095:1	G	G[X:2282290[	26	PASS	DISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=924095:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:2277183(+)-23:2282290(-)__23_2278501_2303501D;SPAN=5107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
X	2282290	924095:2	A	]X:2277183]A	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=924095:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:2277183(+)-23:2282290(-)__23_2278501_2303501D;SPAN=5107;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41
X	5047637	924954:1	T	T[Un_KN707734v1_decoy:1[	46	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=924954:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_5047001_5072001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:4:4.2:46.2,4.2,0:15:0:-46.21:46.21
X	5137385	924998:1	G	G[X:5139458[	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=924998:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:5137385(+)-23:5139458(-)__23_5120501_5145501D;SPAN=2073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	5139458	924998:2	A	]X:5137385]A	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=924998:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:5137385(+)-23:5139458(-)__23_5120501_5145501D;SPAN=2073;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	5811084	925207:1	G	[X:5812566[G	60	PASS	EVDNC=ASSMB;HOMSEQ=GTGGA;MAPQ=60;MATEID=925207:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_23_5806501_5831501_11C;SPAN=1482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:32:17.6:60.5,0,17.6:21:0:-61.42:61.42
X	5811085	925208:1	T	T]X:5812751]	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=925208:2;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_23_5806501_5831501_4C;SPAN=1666;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:20:5:-78.56:78.56
X	5812566	925207:2	T	[X:5811084[T	60	PASS	EVDNC=ASSMB;HOMSEQ=GTGGA;MAPQ=60;MATEID=925207:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_23_5806501_5831501_11C;SPAN=1482;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:21:32:17.6:60.5,0,17.6:21:0:-61.42:61.42
X	5812751	925208:2	A	A]X:5811085]	79	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=925208:1;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_23_5806501_5831501_4C;SPAN=1666;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:24:26:7.2:79.2,7.2,0:20:5:-78.56:78.56
X	7232716	925458:1	A	]X:7238469]A	23	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=925458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_7227501_7252501_10C;SPAN=5753;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15
X	7238469	925458:2	C	C[X:7232716[	23	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=925458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_7227501_7252501_10C;SPAN=5753;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15
X	11051818	925963:1	T	]X:11106877]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TCTA;MAPQ=60;MATEID=925963:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_11098501_11123501_2C;SPAN=55059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
X	11106877	925963:2	A	A[X:11051818[	46	PASS	EVDNC=ASSMB;HOMSEQ=TCTA;MAPQ=60;MATEID=925963:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_11098501_11123501_2C;SPAN=55059;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21
X	11713807	928072:1	A	A[X:26711169[	23	PASS	EVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=928072:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_26705001_26730001_13C;SPAN=14997362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74
X	11714296	926022:2	C	[2:33894159[C	17	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=926022:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_11711001_11736001_46C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:7:20:17.6:17.6,0,30.8:3:5:-17.49:17.74
X	11714300	926030:2	A	[12:39152300[A	14	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTTAGCAGC;MAPQ=60;MATEID=926030:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_11711001_11736001_27C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:6:21:14:14,0,37.1:3:6:-13.9:14.56
X	11935167	926062:1	T	T[X:11941316[	42	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=926062:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:11935167(+)-23:11941316(-)__23_11931501_11956501D;SPAN=6149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
X	11941316	926062:2	C	]X:11935167]C	42	PASS	DISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=926062:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:11935167(+)-23:11941316(-)__23_11931501_11956501D;SPAN=6149;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91
X	16730323	926793:1	C	]X:16795044]C	56	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=926793:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_16782501_16807501_16C;SPAN=64721;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:15:5.1:56.1,5.1,0:13:11:-56.11:56.11
X	16795044	926793:2	G	G[X:16730323[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=926793:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_16782501_16807501_16C;SPAN=64721;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:15:5.1:56.1,5.1,0:13:11:-56.11:56.11
X	26711169	928072:2	C	]X:11713807]C	23	PASS	EVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=928072:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_26705001_26730001_13C;SPAN=14997362;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74
X	28486849	928282:1	T	T[X:28487407[	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=928282:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_28469001_28494001_5C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
X	28487407	928282:2	A	]X:28486849]A	31	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=928282:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_28469001_28494001_5C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6
X	29251032	928378:1	G	[X:29252080[G	82	PASS	DISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=928378:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_29228501_29253501_8C;SPAN=1048;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:26:7.5:82.5,7.5,0:18:15:-82.52:82.52
X	29252080	928378:2	A	[X:29251032[A	82	PASS	DISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=928378:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_29228501_29253501_8C;SPAN=1048;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:27:26:7.5:82.5,7.5,0:18:15:-82.52:82.52
X	34787850	929459:1	A	]X:34792630]A	28	PASS	EVDNC=ASSMB;INSERTION=AGAAT;MAPQ=60;MATEID=929459:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_34790001_34815001_15C;SPAN=4780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:17:11.9:28.4,0,11.9:10:0:-28.47:28.47
X	34792630	929459:2	G	G[X:34787850[	28	PASS	EVDNC=ASSMB;INSERTION=AGAAT;MAPQ=60;MATEID=929459:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_34790001_34815001_15C;SPAN=4780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:17:11.9:28.4,0,11.9:10:0:-28.47:28.47
X	38199383	616477:2	G	G[12:14323917[	36	PASS	DISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=TTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGAGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGG;MAPQ=34;MATEID=616477:1;MATENM=4;NM=6;NUMPARTS=2;SCTG=c_12_14308001_14333001_21C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:7:3.3:36.3,3.3,0:6:7:-36.31:36.31
X	46827692	930954:2	A	A]17:50673981]	29	PASS	DISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT;MAPQ=59;MATEID=930954:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_46819501_46844501_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:3:7:-29.71:29.71
X	48232327	931311:1	T	T[X:48233548[	18	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=931311:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:48232327(+)-23:48233548(-)__23_48216001_48241001D;SPAN=1221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39
X	48233548	931311:2	C	]X:48232327]C	18	PASS	DISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=931311:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:48232327(+)-23:48233548(-)__23_48216001_48241001D;SPAN=1221;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39
X	49017568	931447:1	G	]X:49018696]G	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=931447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_49000001_49025001_18C;SPAN=1128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:12:8:-52.81:52.81
X	49018696	931447:2	C	C[X:49017568[	52	PASS	DISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=931447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_49000001_49025001_18C;SPAN=1128;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:17:18:4.8:52.8,4.8,0:12:8:-52.81:52.81
X	49069209	931464:1	T	]X:49069329]T	41	PASS	EVDNC=ASSMB;HOMSEQ=TGCCT;MAPQ=60;MATEID=931464:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_49049001_49074001_17C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
X	49069329	931464:2	T	T[X:49069209[	41	PASS	EVDNC=ASSMB;HOMSEQ=TGCCT;MAPQ=60;MATEID=931464:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_49049001_49074001_17C;SPAN=120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12
X	49142499	807511:2	A	A]17:52598606]	29	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=807511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:52598606(+)-23:49142499(+)__17_52577001_52602001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3
X	52857692	988228:1	T	]X:55652526]T	39	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACTTTATAA;INSERTION=TGTAAAGCTGTAAAATTTTAAGTGGGAGCATCATAAGTCAGGGGCATCTGTATTCTCTCTGTTGGACTTTGGTATCCAGGTTACACTATCTTCATGAAATGAATTGGGATATAAGTCCTCTTTCTATTCTCTGAAACTGAAATTTCTGCAAGACTGAATAACTTGGGGATAGCCTTTAC;MAPQ=60;MATEID=988228:2;MATENM=0;NM=4;NUMPARTS=7;REPSEQ=AA;SCTG=c_554_1_2235_0C;SPAN=2794834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:0:3.6:39.6,3.6,0:13:0:-39.61:39.61
X	54890705	1003600:1	G	G[Un_JTFH01001605v1_decoy:1[	46	PASS	DISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=1003600:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_2448_1_1195_1C;SPAN=-1;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21
X	55652526	988228:2	T	T[X:52857692[	39	PASS	DISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACTTTATAA;INSERTION=TGTAAAGCTGTAAAATTTTAAGTGGGAGCATCATAAGTCAGGGGCATCTGTATTCTCTCTGTTGGACTTTGGTATCCAGGTTACACTATCTTCATGAAATGAATTGGGATATAAGTCCTCTTTCTATTCTCTGAAACTGAAATTTCTGCAAGACTGAATAACTTGGGGATAGCCTTTAC;MAPQ=60;MATEID=988228:1;MATENM=4;NM=0;NUMPARTS=7;REPSEQ=AA;SCTG=c_554_1_2235_0C;SPAN=2794834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:0:3.6:39.6,3.6,0:13:0:-39.61:39.61
X	55676039	932475:1	T	T[X:55683405[	23	PASS	DISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=932475:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:55676039(+)-23:55683405(-)__23_55664001_55689001D;SPAN=7366;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	55683405	932475:2	T	]X:55676039]T	23	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=932475:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:55676039(+)-23:55683405(-)__23_55664001_55689001D;SPAN=7366;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	62600756	933238:1	A	]X:62601314]A	47	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACATAAAAACTAGACAGAAGCCTTCTCAGAAACTACTTTGTGATGT;MAPQ=60;MATEID=933238:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_62597501_62622501_43C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:14:7:-47.96:47.96
X	62601314	933238:2	T	T[X:62600756[	47	PASS	DISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=ACATAAAAACTAGACAGAAGCCTTCTCAGAAACTACTTTGTGATGT;MAPQ=60;MATEID=933238:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_62597501_62622501_43C;SPAN=558;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:17:30:27.8:47.6,0,27.8:14:7:-47.96:47.96
X	64507376	933494:2	A	A[14:52475035[	42	PASS	DISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=933494:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_23_64484001_64509001_20C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:14:4:3.9:42.9,3.9,0:10:9:-42.91:42.91
X	64512169	933497:2	T	[2:4274462[T	36	PASS	DISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=16;MATEID=933497:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_64508501_64533501_2C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:5:3.3:36.3,3.3,0:7:5:-36.31:36.31
X	68328802	934007:2	C	C[17:45488644[	52	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=934007:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:45488644(-)-23:68328802(+)__23_68306001_68331001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81
X	70909425	934404:1	A	[X:70920177[A	52	PASS	DISC_MAPQ=59;EVDNC=TSI_L;HOMSEQ=CCATGTT;MAPQ=60;MATEID=934404:2;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=TT;SCTG=c_23_70903001_70928001_4C;SPAN=10752;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:13:4.8:52.8,4.8,0:14:8:-52.81:52.81
X	70909570	934405:1	T	T]X:70917407]	28	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=934405:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_70903001_70928001_3C;SPAN=7837;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
X	70917407	934405:2	T	T]X:70909570]	28	PASS	EVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=934405:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_70903001_70928001_3C;SPAN=7837;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89
X	70920177	934404:2	C	[X:70909425[C	52	PASS	DISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CCATGTT;MAPQ=60;MATEID=934404:1;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=TT;SCTG=c_23_70903001_70928001_4C;SPAN=10752;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:13:4.8:52.8,4.8,0:14:8:-52.81:52.81
X	76034035	935120:1	T	T[X:76034332[	99	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAATGTCTTCTTTT;MAPQ=48;MATEID=935120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_76023501_76048501_4C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:5:12:132,12,0:38:6:-132:132
X	76034332	935120:2	A	]X:76034035]A	99	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAATGTCTTCTTTT;MAPQ=60;MATEID=935120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_76023501_76048501_4C;SPAN=297;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:43:5:12:132,12,0:38:6:-132:132
X	77865920	935477:1	C	C[X:77868370[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=935477:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_77861001_77886001_29C;SPAN=2450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:11:12:-56.11:56.11
X	77868370	935477:2	C	]X:77865920]C	56	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=935477:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_77861001_77886001_29C;SPAN=2450;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:5:5.1:56.1,5.1,0:11:12:-56.11:56.11
X	79412522	935715:1	C	C[X:79415029[	41	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=935715:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_79404501_79429501_21C;SPAN=2507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24
X	79415029	935715:2	C	]X:79412522]C	41	PASS	EVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=935715:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_79404501_79429501_21C;SPAN=2507;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24
X	81554533	936101:1	A	]X:81557077]A	29	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=936101:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_81536001_81561001_9C;SPAN=2544;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
X	81557077	936101:2	C	C[X:81554533[	29	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=936101:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_81536001_81561001_9C;SPAN=2544;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85
X	84849013	936673:1	A	[X:84880060[A	26	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=936673:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:84849013(-)-23:84880060(-)__23_84843501_84868501D;SPAN=31047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
X	84880060	936673:2	C	[X:84849013[C	26	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=936673:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:84849013(-)-23:84880060(-)__23_84843501_84868501D;SPAN=31047;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41
X	86350284	937029:1	G	G[X:86354860[	66	PASS	DISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=937029:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:86350284(+)-23:86354860(-)__23_86338001_86363001D;SPAN=4576;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:6:6:66,6,0:0:22:-66.02:66.02
X	86354860	937029:2	C	]X:86350284]C	66	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=937029:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:86350284(+)-23:86354860(-)__23_86338001_86363001D;SPAN=4576;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:6:6:66,6,0:0:22:-66.02:66.02
X	87031756	937199:1	G	G[X:87032222[	39	PASS	EVDNC=ASSMB;INSERTION=GAGTTTTGTTTTAAG;MAPQ=60;MATEID=937199:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_87024001_87049001_7C;SPAN=466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61
X	87032222	937199:2	T	]X:87031756]T	39	PASS	EVDNC=ASSMB;INSERTION=GAGTTTTGTTTTAAG;MAPQ=60;MATEID=937199:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_87024001_87049001_7C;SPAN=466;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61
X	89206255	937778:1	T	T[X:89207312[	3	PASS	DISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=GTGTCGTAAAATACCGACGTATCTGTTATAATCGTCGGTGTCGTAAAATACCGACGTATAT;MAPQ=16;MATEID=937778:2;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_23_89204501_89229501_6C;SPAN=1057;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:106:3.5:3.5,0,260.9:6:4:-3.214:18.96
X	89207312	937778:2	G	]X:89206255]G	3	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGTCGTAAAATACCGACGTATCTGTTATAATCGTCGGTGTCGTAAAATACCGACGTATAT;MAPQ=60;MATEID=937778:1;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_23_89204501_89229501_6C;SPAN=1057;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:10:106:3.5:3.5,0,260.9:6:4:-3.214:18.96
X	93541300	938557:1	T	T[X:93546506[	46	PASS	EVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=938557:2;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_23_93541001_93566001_10C;SPAN=5206;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21
X	93546506	938557:2	T	]X:93541300]T	46	PASS	EVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=938557:1;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_23_93541001_93566001_10C;SPAN=5206;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21
X	93733574	948094:1	T	]X:150010694]T	29	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=948094:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_149989001_150014001_9C;SPAN=56277120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:10:0:-29.71:29.71
X	97170044	939151:1	A	A[X:97179380[	37	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=939151:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_97167001_97192001_10C;SPAN=9336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78
X	97179380	939151:2	A	]X:97170044]A	37	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=939151:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_97167001_97192001_10C;SPAN=9336;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78
X	98861246	939490:1	G	G[X:98861440[	19	PASS	EVDNC=ASSMB;INSERTION=TAGGAAAAAC;MAPQ=60;MATEID=939490:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_98857501_98882501_8C;SPAN=194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
X	98861440	939490:2	G	]X:98861246]G	19	PASS	EVDNC=ASSMB;INSERTION=TAGGAAAAAC;MAPQ=60;MATEID=939490:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_98857501_98882501_8C;SPAN=194;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89
X	104431017	940520:1	G	G[X:104436824[	34	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=940520:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_104419001_104444001_5C;SPAN=5807;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:13:0:-34.2:34.27
X	104436824	940520:2	A	]X:104431017]A	34	PASS	EVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=940520:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_104419001_104444001_5C;SPAN=5807;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:31:34.4:34.4,0,41:13:0:-34.2:34.27
X	105542844	940773:2	T	T[2:157171629[	29	PASS	EVDNC=ASSMB;HOMSEQ=AAAAT;MAPQ=60;MATEID=940773:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_105521501_105546501_0C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71
X	108048015	941109:2	T	T[17:81970200[	33	PASS	DISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=941109:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:81970200(-)-23:108048015(+)__23_108045001_108070001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:5:3:33,3,0:0:11:-33.01:33.01
X	111769097	941661:2	T	T[14:20273533[	42	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=941661:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_111769001_111794001_6C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:14:3.9:42.9,3.9,0:9:8:-42.71:42.71
X	123838983	943695:1	C	C[X:123839817[	46	PASS	DISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGGGTTTCACCATGTTGGCCAGGCTGGTCTAGAACTCCTGAC;MAPQ=60;MATEID=943695:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_23_123823001_123848001_34C;SPAN=834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:11:7:-46.21:46.21
X	123839817	943695:2	G	]X:123838983]G	46	PASS	DISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGGGTTTCACCATGTTGGCCAGGCTGGTCTAGAACTCCTGAC;MAPQ=60;MATEID=943695:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_23_123823001_123848001_34C;SPAN=834;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:6:4.2:46.2,4.2,0:11:7:-46.21:46.21
X	128240984	944454:1	A	A[X:128745219[	33	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=944454:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_128723001_128748001_38C;SPAN=504235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:7:3:33,3,0:11:0:-33.01:33.01
X	128745219	944454:2	A	]X:128240984]A	33	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=944454:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_128723001_128748001_38C;SPAN=504235;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:11:7:3:33,3,0:11:0:-33.01:33.01
X	129004193	944531:1	T	T[X:129005596[	14	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=944531:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_128992501_129017501_5C;SPAN=1403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:7:1.4:14.6,0,1.4:5:0:-14.96:14.96
X	129005596	944531:2	A	]X:129004193]A	14	PASS	EVDNC=ASSMB;MAPQ=60;MATEID=944531:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_128992501_129017501_5C;SPAN=1403;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:5:7:1.4:14.6,0,1.4:5:0:-14.96:14.96
X	131679239	944851:1	C	C]X:131840248]	52	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGTGTGTCTA;MAPQ=60;MATEID=944851:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_23_131834501_131859501_5C;SPAN=161009;SUBN=1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:16:3:-52.81:52.81
X	131840248	944851:2	A	A]X:131679239]	52	PASS	DISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=GTGTGTGTCTA;MAPQ=11;MATEID=944851:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_23_131834501_131859501_5C;SPAN=161009;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:18:5:4.8:52.8,4.8,0:16:3:-52.81:52.81
X	135906193	945454:1	T	]X:135906599]T	27	PASS	DISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TACTTGGTTTCCATATGCAT;MAPQ=60;MATEID=945454:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_135901501_135926501_3C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:9:6:-27.32:27.77
X	135906599	945454:2	T	T[X:135906193[	27	PASS	DISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TACTTGGTTTCCATATGCAT;MAPQ=60;MATEID=945454:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_135901501_135926501_3C;SPAN=406;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:32:27.5:27.5,0,50.6:9:6:-27.32:27.77
X	136075840	945488:1	G	G[X:136076155[	26	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATAAAACAGGG;MAPQ=60;MATEID=945488:2;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_23_136073001_136098001_1C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57
X	136076155	945488:2	A	]X:136075840]A	26	PASS	EVDNC=ASSMB;HOMSEQ=AAGAAAATAAAACAGGG;MAPQ=60;MATEID=945488:1;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_23_136073001_136098001_1C;SPAN=315;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57
X	136874391	945666:2	G	G]9:30690082]	32	PASS	DISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=945666:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:30690082(+)-23:136874391(+)__23_136857001_136882001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57
X	140075589	946290:1	C	]X:140138868]C	23	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=946290:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:140075589(-)-23:140138868(+)__23_140066501_140091501D;SPAN=63279;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	140138868	946290:2	C	C[X:140075589[	23	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=946290:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:140075589(-)-23:140138868(+)__23_140066501_140091501D;SPAN=63279;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	141414291	13066:2	G	G[1:53954735[	0	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=60;MATEID=13066:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_53949001_53974001_18C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:94:0.2:0.2,0,234.5:6:4:0.01462:14.79
X	141421312	946528:1	C	C[X:141427247[	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=946528:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141421312(+)-23:141427247(-)__23_141414001_141439001D;SPAN=5935;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:6:5.4:59.4,5.4,0:0:20:-59.41:59.41
X	141427247	946528:2	C	]X:141421312]C	59	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=946528:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141421312(+)-23:141427247(-)__23_141414001_141439001D;SPAN=5935;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:20:6:5.4:59.4,5.4,0:0:20:-59.41:59.41
X	141915537	946660:1	T	T]X:142187317]	23	PASS	DISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=946660:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141915537(+)-23:142187317(+)__23_142173501_142198501D;SPAN=271780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	142187317	946660:2	T	T]X:141915537]	23	PASS	DISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=946660:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141915537(+)-23:142187317(+)__23_142173501_142198501D;SPAN=271780;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	142905838	887457:2	A	A]20:58493483]	26	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=887457:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_58481501_58506501_64C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:13:59:26.3:26.3,0,122:11:2:-26.33:29.85
X	143542896	946917:1	T	]X:143646903]T	39	PASS	DISC_MAPQ=56;EVDNC=ASDIS;INSERTION=GAATTTGTT;MAPQ=60;MATEID=946917:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_143643501_143668501_13C;SPAN=104007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:7:11:-39.61:39.61
X	143646903	946917:2	A	A[X:143542896[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAATTTGTT;MAPQ=60;MATEID=946917:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_143643501_143668501_13C;SPAN=104007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:12:3.6:39.6,3.6,0:7:11:-39.61:39.61
X	144323981	947033:1	A	A[X:144326855[	46	PASS	DISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=947033:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:144323981(+)-23:144326855(-)__23_144305001_144330001D;SPAN=2874;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	144326855	947033:2	A	]X:144323981]A	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=947033:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:144323981(+)-23:144326855(-)__23_144305001_144330001D;SPAN=2874;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:11:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	144475606	947075:1	N	]Un_JTFH01001910v1_decoy:2437]N	29	PASS	EVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=947075:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_144452001_144477001_3C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:2:2.7:29.7,2.7,0:10:0:-29.71:29.71
X	145340657	947300:1	A	A[X:145342987[	46	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=947300:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:145340657(+)-23:145342987(-)__23_145334001_145359001D;SPAN=2330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:5:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	145342987	947300:2	C	]X:145340657]C	46	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=947300:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:145340657(+)-23:145342987(-)__23_145334001_145359001D;SPAN=2330;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:15:5:4.2:46.2,4.2,0:0:15:-46.21:46.21
X	146484967	947456:1	T	]X:146496410]T	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=947456:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_146485501_146510501_5C;SPAN=11443;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:6:10:-39.61:39.61
X	146496410	947456:2	T	T[X:146484967[	39	PASS	DISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=947456:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_146485501_146510501_5C;SPAN=11443;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:13:11:3.6:39.6,3.6,0:6:10:-39.61:39.61
X	148375423	947827:1	C	C[X:148376430[	36	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=947827:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:148375423(+)-23:148376430(-)__23_148372001_148397001D;SPAN=1007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
X	148376430	947827:2	G	]X:148375423]G	36	PASS	DISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=947827:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:148375423(+)-23:148376430(-)__23_148372001_148397001D;SPAN=1007;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31
X	148428177	947841:1	G	G[X:148429717[	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=947841:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_148421001_148446001_6C;SPAN=1540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11
X	148429717	947841:2	T	]X:148428177]T	56	PASS	DISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=947841:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_148421001_148446001_6C;SPAN=1540;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11
X	149654088	948062:1	G	G]X:149749267]	47	PASS	DISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=948062:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:149654088(+)-23:149749267(+)__23_149744001_149769001D;SPAN=95179;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75
X	149749267	948062:2	T	T]X:149654088]	47	PASS	DISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=948062:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:149654088(+)-23:149749267(+)__23_149744001_149769001D;SPAN=95179;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75
X	150010694	948094:2	G	G[X:93733574[	29	PASS	EVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=948094:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_149989001_150014001_9C;SPAN=56277120;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:10:6:2.7:29.7,2.7,0:10:0:-29.71:29.71
X	150398269	696185:2	G	]14:47771434]G	22	PASS	DISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=696185:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771434(+)-23:150398269(-)__14_47750501_47775501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93
X	150398432	948160:2	T	T[14:47771706[	23	PASS	DISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=948160:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771706(-)-23:150398432(+)__23_150381001_150406001D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11
X	154456620	948741:2	C	[2:47092142[C	56	PASS	DISC_MAPQ=5;EVDNC=ASDIS;HOMSEQ=G;MAPQ=18;MATEID=948741:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_154448001_154473001_7C;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:19:7:5.1:56.1,5.1,0:12:9:-56.11:56.11
X	155159534	948815:2	C	C[20:55808995[	66	PASS	DISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=948815:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:55808995(-)-23:155159534(+)__23_155158501_155183501D;SPAN=-1;SVTYPE=BND	GT:AD:DP:GQ:PL:SR:DR:LR:LO	1/1:22:17:6:66,6,0:0:22:-66.02:66.02


================================================
FILE: tests/AnnotSV/test_24_HtzCompound/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"



######################################################################
## First, we need to understand the data that will be used for TESTING
######################################################################


# In "./input/test1.SV.vcf", there is only 1 SV (identified in sample-002 but not in sample-001)
################################################################################################################

# CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  sample-001      sample-002
# 2       27313898        606     N       <DEL>   59.61   .       SVTYPE=DEL;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6    GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB     0/0:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043     0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13


# To find the htz compound, we use a VCF (./input/test1.snvindel.vcf) with an indel present in the SV for each of the samples
#############################################################################################################################

# CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  sample-001      sample-002
# 2       27313998        606     A       ATC     59.61   .       CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6  GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB  0/1:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043        0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13


# => In output, we must therefore have an htz compound only for sample-002 (since there is no SV in sample-001) on the "split" line



###############################################################
## TESTS
###############################################################

# The "Sample_ID" feature allows to better visualize the samples which contain the SV (in our example, only the sample "sample-002" contains the SV)
# "Samples_ID" present in the "./input/configfile"

mkdir -p ./output
rm -f "./output/test1_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test1.SV.vcf" -candidateSnvIndelFiles "./input/test1.snvindel.vcf" -outputFile "./output/test1_tcl.annotated.tsv" -genomeBuild GRCh37

# AnnotSV_ID                      Samples_ID      Annotation_mode compound_htz(sample-001)        compound_htz(sample-002)        ACMG_class
# 2_27313892_27314030_DEL_1       sample-002      full                                                                            3
# 2_27313892_27314030_DEL_1       sample-002      split                                           2_27313998                      full=3

annotations=`$cut ./output/test1_tcl.annotated.tsv "AnnotSV_ID;Samples_ID;Annotation_mode;compound_htz(sample-001);compound_htz(sample-002);ACMG_class" | grep full`

if [ `echo $annotations | grep -c "sample-002"` == 1 ] && [ `echo $annotations | grep -c "sample-001"` == 0 ]
then
        echo "Ok"
else
        echo "error 1: Exomiser does not work (GRCh37-1SV)"
        exit 1
fi



# We check the cases for which this analysis cannot be carried out:
# - Case 1: with a BED SV input file (-SVinputFile)
# - Case 2: with a SV VCF input file without "GT" (-SVinputFile)
# - Case 3: with a SNV/indel VCF file without "GT" (-candidateSnvIndelFiles)

# Case 1: with a BED SV input file (-SVinputFile)
#################################################

rm -f "./output/test1_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test1.SV.bed" -candidateSnvIndelFiles "./input/test1.snvindel.vcf" -outputFile "./output/test1_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37 &> ./output/output.log

if [ `grep -c "WARNING: The compound heterozygosity analysis is not available from a BED SV input file" ./output/output.log` == 1 ]
then
        echo "Ok"
else
        echo "error 1: No error message displayed for the use of -candidateSnvIndelFiles with a BED input file"
        exit 1
fi


annotations=`$cut "./output/test1_tcl.annotated.tsv" "AnnotSV_ID;Samples_ID;Annotation_mode;compound_htz(sample-001);compound_htz(sample-002);ACMG_class"`

# AnnotSV_ID      Annotation_mode ACMG_class
# 2_27313898_27314025_DEL_1       full    3
# 2_27313898_27314025_DEL_1       split   full=3

if [ `echo $annotations | grep -c "compound_htz"` == 0 ] 
then
        echo "Ok"
else
        echo "error 1: compound_htz annotations seem to be present. Should not with a BED input file"
        exit 1
fi



# Case 2: with a SV VCF input file without "GT" (-SVinputFile)
##############################################################

rm -f "./output/test1_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test1.SV.withoutGT.vcf" -candidateSnvIndelFiles "./input/test1.snvindel.vcf" -outputFile "./output/test1_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37 &> ./output/output.log

#...WARNING: The SV genotype is not indicated in the FORMAT column under the “GT” field
if [ `grep -c "WARNING: The SV genotype is not indicated in the FORMAT column under the " ./output/output.log` == 1 ]
then
        echo "Ok"
else
        echo "error 1: No error message displayed for the use of -candidateSnvIndelFiles with a SV VCF input file without GT"
        exit 1
fi

annotations=`$cut "./output/test1_tcl.annotated.tsv" "AnnotSV_ID;Samples_ID;Annotation_mode;compound_htz(sample-001);compound_htz(sample-002);ACMG_class"`

# AnnotSV_ID      Samples_ID      Annotation_mode ACMG_class
# 2_27313892_27314030_DEL_1       sample-001,sample-002   full    3
# 2_27313892_27314030_DEL_1       sample-001,sample-002   split   full=3

if [ `echo $annotations | grep -c "compound_htz"` == 0 ]
then
        echo "Ok"
else
        echo "error 1: compound_htz annotations seem to be present. Should not with a SV VCF input file without GT"
        exit 1
fi



# Case 3: with a SNV/indel VCF file without "GT" (-candidateSnvIndelFiles)
##########################################################################
rm -f "./output/test1_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test1.SV.vcf" -candidateSnvIndelFiles "./input/test1.snvindel.withoutGT.vcf" -outputFile "./output/test1_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37 &> ./output/output.log

#...WARNING: The SNV/indel genotype is not indicated in the FORMAT column under the “GT” field
if [ `grep -c "WARNING: The SNV/indel genotype is not indicated in the FORMAT column under the" ./output/output.log` == 1 ]
then
        echo "Ok"
else
        echo "error 1: No error message displayed for the use of -candidateSnvIndelFiles with a SNV/indel VCF file without GT"
        exit 1
fi

annotations=`$cut "./output/test1_tcl.annotated.tsv" "AnnotSV_ID;Samples_ID;Annotation_mode;compound_htz(sample-001);compound_htz(sample-002);ACMG_class"`

# AnnotSV_ID      Samples_ID      Annotation_mode ACMG_class
# 2_27313892_27314030_DEL_1       sample-002      full    3
# 2_27313892_27314030_DEL_1       sample-002      split   full=3

if [ `echo $annotations | grep -c "compound_htz"` == 0 ]
then
        echo "Ok"
else
        echo "error 1: compound_htz annotations seem to be present. Should not with a SNV/indel VCF file without GT"
        exit 1
fi



###############################################################
## TESTS WITH 3 samples
###############################################################


# ./input/3samples.theSV.vcf
############################
# #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  father  mother  prob
# chr1    934051  DEL00000005     G       <DEL>   .       PASS    IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=934869;PE=10;MAPQ=60;CT=3to5;CIPOS=-72,72;CIEND=-72,72;RDRATIO=0.544828    GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV 0/0:-51.0882,0,-14.6956:147:PASS:49:15:32:0:5:10:0:0    0/1:-9.60325,0,-21.6918:96:PASS:53:18:34:0:6:2:0:0      1/0:0,-2.37679,-28.3685:24:PASS:53:30:26:1:8:0:0:0

# DEL: 1:934051-934869
# => detected in "mother,prob"
# => This SV overlaps only 1 gene: SAMD11


# grep SAMD11 $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh38/genes.RefSeq.sorted.bed
# 1       923922  944574  +       SAMD11  NM_001385640    924431  944153  923922,925921,930154,931038,935771,939039,939271,941143,942135,942409,942558,943252,943697,943907,      924948,926013,930336,931089,935896,939129,939412,941306,942251,942488,943058,943377,943808,944574,

# => SAMD11 (GRCh38) NM_001385640, 1:923922-944574



# Search for htz SNVs that are in the overlapped gene (1:923922-944574) (not only in the gene-DEL intersection)
###############################################################################################################

# Extract from the SNV/indel file corresponding to the location of the gene (1:923922-944574) overlapped by the SV
# (We notice that the order of the samples in the SNV/indel file is not the same as in the SV VCF!)

#		prob    father  mother
#chr1 925036     0|0     0|1     0|1
#chr1 925141     1|1     1|1     1|1
#chr1 926250     0|0     0|1     0|1
#chr1 926428     1|1     1|1     1|1
#chr1 926713     1|1     1|1     1|1
#chr1 926744     1|1     1|1     1|1
#chr1 927003     1|1     1|1     1|1
#chr1 927486     0|0     0|1     0|1
#chr1 927744     1|1     1|1     1|1
#chr1 928622     1|1     1|0     1|0
#chr1 929346     1|1     1|1     1|1
#chr1 929375     1|1     1|1     1|1
#chr1 929377     1|1     1|1     1|1
#chr1 929558     0|0     0|1     0|1
#chr1 929839     1|1     1|0     1|0
#chr1 930939     1|1     1|1     1|1
#chr1 931131     0|0     0|1     0|1
#chr1 931513     0|0     0|1     0|1
#chr1 932204     0|0     0|1     0|1
#chr1 932613     0|0     0|1     0|1
#chr1 932949     1|1     1|1     1|1
#chr1 932976     1|1     1|0     1|0
#chr1 933024     0|0     0|1     0|1
#chr1 933411     0|0     0|1     0|1
#chr1 933511     1|1     1|1     1|1
#chr1 933548     0|0     0|1     0|1
#chr1 934601     0|0     0|1     0|1
#chr1 934758     1|0     0|1     0|1
#chr1 935523     0|0     0|1     0|1
#chr1 935954     0|0     0|1     0|1
#chr1 938178     0|0     0|1     0|1
#chr1 939779     0|0     0|1     0|1
#chr1 940262     0|0     0|0     0|1 
#chr1 940263     0/0     0/1     0/2
#chr1 940296     0|0     0|1     ./.
#chr1 940390     0|0     0|1     0|1
#chr1 940820     0|0     0|0     0|1 
#chr1 941119     0|0     0|1     0|1
#chr1 942335     0|0     0|1     0|1
#chr1 943526     0|0     0|1     0|1
#chr1 944296     0|0	0|1	0|1
#chr1 944307     0|0	0|1	0|1

# =>  1 snv/indel htz chez prob
#    28 snv/indel htz chez father
#    29 snv/indel htz chez mother


# AnnotSV
#########

# AnnotSV must report the SNV/indel htz (not the hom) in the mother and the prob (not in the father who does not have this SV)
rm -f "./output/3samples_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/3samples.theSV.vcf" -candidateSnvIndelFiles "./input/3samples.theSnvindel.vcf" -candidateSnvIndelSamples "prob father mother" -genomeBuild GRCh38 -outputFile "./output/3samples_tcl.annotated.tsv" -includeCI 0

n=`$cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;compound_htz(father)" | grep 934051 | tr ";|\t" "\n" | grep -c "1_"`
# 1_934051_934869_DEL_1
# 1_934051_934869_DEL_1
# => ok, nothing reported in the father
if [ $n == 2 ]
then
        echo "Ok"
else
        echo "error 1: some SNV/indel are reported in the father who does not have the SV"
        exit 1
fi


n=`$cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;compound_htz(mother)" | grep 934051 | tr ";|\t" "\n" | grep -c "1_"`
# 1_934051_934869_DEL_1
# 1_934051_934869_DEL_1   1_925036;1_926250;1_927486;1_928622;1_929558;1_929839;1_931131;1_931513;1_932204;1_932613;1_932976;1_933024;1_933411;1_933548;1_934601;1_934758;1_935523;1_935954;1_938178;1_939779;1_940262;1_940263;1_940390;1_940820;1_941119;1_942335;1_943526;1_944296;1_944307
# => ok, 29 snv/indel reporté chez la mother
if [ $n == 31 ]
then
        echo "Ok"
else
        echo "error 1: check the number of SNV/indel reported in the mother (who have the SV)"
        exit 1
fi

n=`$cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;compound_htz(prob)" | grep 934051 | tr ";|\t" "\n" | grep -c "1_"`
# 1_934051_934869_DEL_1
# 1_934051_934869_DEL_1   1_934758
# => ok, 1 snvindel reporté chez le prob
if [ $n == 3 ]
then
        echo "Ok"
else
        echo "error 1: check the number of SNV/indel reported in the probe (who have the SV)"
        exit 1
fi



# On refait en ne reportant que les snv/indel de chez "prob father"
###################################################################

# AnnotSV must report the SNV/indel htz (not the hom) in the prob (not in the father who does not have this SV, not in the mother absent from the "-candidateSnvIndelSamples" option)
rm -f "./output/3samples_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/3samples.theSV.vcf" -candidateSnvIndelFiles "./input/3samples.theSnvindel.vcf" -candidateSnvIndelSamples "prob;father" -genomeBuild GRCh38 -outputFile "./output/3samples_tcl.annotated.tsv" -includeCI 0

n=`$cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;compound_htz(father)" | grep 934051 | tr ";|\t" "\n" | grep -c "1_"`
if [ $n == 2 ]
then
        echo "Ok"
else
        echo "error 1: some SNV/indel are reported in the father who does not have the SV"
        exit 1
fi


n=`$cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;compound_htz(mother)" | grep 934051 | tr ";|\t" "\n" | grep -c "1_"`
if [ $n == 2 ]
then
        echo "Ok"
else
        echo "error 1: some SNV/indel are reported in the mother who should not be reported"
        exit 1
fi

n=`$cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;compound_htz(prob)" | grep 934051 | tr ";|\t" "\n" | grep -c "1_"`
if [ $n == 3 ]
then
        echo "Ok"
else
        echo "error 1: check the number of SNV/indel reported in the probe (who have the SV)"
        exit 1
fi



echo "ok - Finished"






================================================
FILE: tests/AnnotSV/test_24_HtzCompound/input/3samples.severalSV.vcf
================================================
##fileformat=VCFv4.2
##FILTER=<ID=PASS,Description="All filters passed">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=BND,Description="Translocation">
##ALT=<ID=INS,Description="Insertion">
##FILTER=<ID=LowQual,Description="Poor quality and insufficient number of PEs and SRs.">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="PE confidence interval around END">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="PE confidence interval around POS">
##INFO=<ID=CHR2,Number=1,Type=String,Description="Chromosome for END coordinate in case of a translocation">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the structural variant">
##INFO=<ID=PE,Number=1,Type=Integer,Description="Paired-end support of the structural variant">
##INFO=<ID=MAPQ,Number=1,Type=Integer,Description="Median mapping quality of paired-ends">
##INFO=<ID=SRMAPQ,Number=1,Type=Integer,Description="Median mapping quality of split-reads">
##INFO=<ID=SR,Number=1,Type=Integer,Description="Split-read support">
##INFO=<ID=SRQ,Number=1,Type=Float,Description="Split-read consensus alignment quality">
##INFO=<ID=CONSENSUS,Number=1,Type=String,Description="Split-read consensus sequence">
##INFO=<ID=CE,Number=1,Type=Float,Description="Consensus sequence entropy">
##INFO=<ID=CT,Number=1,Type=String,Description="Paired-end signature induced connection type">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=PRECISE,Number=0,Type=Flag,Description="Precise structural variation">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVMETHOD,Number=1,Type=String,Description="Type of approach used to detect SV">
##INFO=<ID=INSLEN,Number=1,Type=Integer,Description="Predicted length of the insertion">
##INFO=<ID=HOMLEN,Number=1,Type=Integer,Description="Predicted microhomology length using a max. edit distance of 2">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=GL,Number=G,Type=Float,Description="Log10-scaled genotype likelihoods for RR,RA,AA genotypes">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=FT,Number=1,Type=String,Description="Per-sample genotype filter">
##FORMAT=<ID=RC,Number=1,Type=Integer,Description="Raw high-quality read counts for the SV">
##FORMAT=<ID=RCL,Number=1,Type=Integer,Description="Raw high-quality read counts for the left control region">
##FORMAT=<ID=RCR,Number=1,Type=Integer,Description="Raw high-quality read counts for the right control region">
##FORMAT=<ID=CN,Number=1,Type=Integer,Description="Read-depth based copy-number estimate for autosomal sites">
##FORMAT=<ID=DR,Number=1,Type=Integer,Description="# high-quality reference pairs">
##FORMAT=<ID=DV,Number=1,Type=Integer,Description="# high-quality variant pairs">
##FORMAT=<ID=RR,Number=1,Type=Integer,Description="# high-quality reference junction reads">
##FORMAT=<ID=RV,Number=1,Type=Integer,Description="# high-quality variant junction reads">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	father	mother	prob
chr1	820046	DUP00000003	C	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=821202;PE=9;MAPQ=33;CT=5to3;CIPOS=-50,50;CIEND=-50,50;RDRATIO=2.63448	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-8.42878,-166:84:PASS:93:145:94:2:28:0:0:0	0/1:-16.9096,0,-182.862:10000:PASS:101:399:115:4:36:13:0:0	0/1:-4.01947,0,-161.901:40:PASS:95:382:92:4:31:7:0:0
chr1	820998	DEL00000003	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=823044;PE=5;MAPQ=28;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.614482	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-5.41743,-96.4989:54:PASS:136:279:134:2:18:0:0:0	0/1:-20.0978,0,-115.444:10000:PASS:355:454:360:1:24:18:0:0	0/1:-20.4472,0,-81.7172:10000:PASS:355:372:327:1:18:15:0:0
chr1	822298	DEL00000004	A	<DEL>	.	LowQual	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=823305;PE=2;MAPQ=22;CT=3to5;CIPOS=-402,402;CIEND=-402,402;RDRATIO=0.707427	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-6.32071,-120.699:63:PASS:58:130:69:2:21:0:0:0	0/1:-22.151,0,-174.315:10000:PASS:90:236:252:1:33:20:0:0	0/1:-29.6254,0,-142.317:10000:PASS:77:210:213:1:29:28:0:0
chr1	822365	DUP00000005	A	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=822965;PE=6;MAPQ=40;CT=5to3;CIPOS=-219,219;CIEND=-219,219;RDRATIO=1.24842	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-4.75717,-87.5407:48:PASS:35:77:34:2:16:0:0:0	0/1:-23.4586,0,-154.16:10000:PASS:59:163:58:3:30:16:0:0	0/1:-37.2754,0,-107.034:10000:PASS:51:141:54:3:22:27:0:0
chr1	934051	DEL00000005	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=934869;PE=10;MAPQ=60;CT=3to5;CIPOS=-72,72;CIEND=-72,72;RDRATIO=0.544828	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:-51.0882,0,-14.6956:147:PASS:49:15:32:0:5:10:0:0	0/1:-9.60325,0,-21.6918:96:PASS:53:18:34:0:6:2:0:0	1/0:0,-2.37679,-28.3685:24:PASS:53:30:26:1:8:0:0:0
chr1	2652714	DEL00000018	G	<DEL>	.	LowQual	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=2676785;PE=2;MAPQ=42;CT=3to5;CIPOS=-467,467;CIEND=-467,467;RDRATIO=0.78942	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-1.61381,0,-76.7451:16:PASS:2197:5008:2739:2:18:5:0:0	0/0:0,-2.11657,-77.6304:21:PASS:2026:5308:2104:3:15:3:0:0	0/0:0,-4.81244,-82.096:48:PASS:1943:4060:1591:2:16:0:0:0
chr1	2685587	DUP00000037	C	<DUP>	.	LowQual	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=2685897;PE=2;MAPQ=40;CT=5to3;CIPOS=-507,507;CIEND=-507,507;RDRATIO=1.27136	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-2.01703,-69.9355:20:PASS:6143:21058:8717:3:18:3:0:0	0/1:-1.29188,0,-55.3469:13:LowQual:3201:20645:8258:4:16:3:0:0	0/1:-3.20596,0,-38.785:32:PASS:3145:11312:4454:3:12:4:0:0
chr1	3181075	DUP00000046	G	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=3181767;PE=7;MAPQ=60;CT=5to3;CIPOS=-511,511;CIEND=-511,511;RDRATIO=1.79409	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-21.8763,0,-89.0972:10000:PASS:45:126:43:3:16:7:0:0	0/1:-4.17323,0,-136.173:42:PASS:59:120:61:2:24:2:0:0	0/0:0,-4.51544,-90:45:PASS:49:83:55:2:15:0:0:0
chr1	6558910	INV00000001	G	<INV>	.	PASS	PRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=6559723;PE=6;MAPQ=42;CT=3to3;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=13;SRQ=0.972678;CONSENSUS=CAGGCGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATCACAGACATGTGCCAGCATGCCCGGCTAATTTTTGTACTTTTTTTTTTTTTTTGAGTACTAGGATTACAGGCGTGAACCACCTCGCCTGGCCAAAACCTCAGGCTTTTTTTTTTTTTTTTATGGGAGGGAGTCTCGCTCTGTC;CE=1.95845;RDRATIO=1.23005	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-15.776,0,-59.0749:157:PASS:45:75:62:1:20:4:19:7	0/1:-31.9723,0,-44.0907:10000:PASS:32:95:50:2:16:2:15:14	0/0:0,-6.31857,-73.8969:63:PASS:40:81:46:2:18:0:21:0
chr1	6559056	INV00000002	T	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=6559640;PE=3;MAPQ=60;CT=5to5;CIPOS=-560,560;CIEND=-560,560;RDRATIO=1.35335	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-6.92368,-138:69:PASS:31:53:39:2:23:0:0:0	0/1:-30.2681,0,-128.682:10000:PASS:18:74:28:3:23:8:0:0	0/0:0,-8.1278,-162:81:PASS:20:63:33:2:27:0:0:0
chr1	7856597	INS00000001	T	<INS>	.	PASS	PRECISE;SVTYPE=INS;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=7856598;PE=0;MAPQ=0;CT=NtoN;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=63;HOMLEN=3;SR=6;SRQ=0.989011;CONSENSUS=GGGCAAATAAAGTGAAGAGAGTCCCTGGGGGACCCCTGCTGCTGACAGTTGGGGAACCTTCCCGAAGGCCCAGGCTGGCTGTGTGGGAGCGCCTGGAGGCCTCGGCAGGAGAGCCCAGGGCAAGTGCTCGCACACTGTCCTCTAAGATGGAAAG;CE=1.93496;RDRATIO=1.00027	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-83.0527,0,-62.1538:10000:PASS:17750:34730:16969:2:0:0:21:27	0/0:0,-10.5318,-126.896:105:PASS:21823:37243:15403:2:0:0:35:0	0/1:-127.743,0,-45.845:10000:PASS:20198:37430:17205:2:0:0:18:40
chr1	10422452	DEL00000039	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=10423709;PE=31;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.502513	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.93398,-198:99:PASS:73:151:61:2:33:0:0:0	0/1:-65.8619,0,-132.862:10000:PASS:76:94:90:1:24:13:0:0	0/1:-102.862,0,-96.8619:10000:PASS:50:60:85:1:18:19:0:0
chr1	12148732	DEL00000044	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=12148807;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=6;SRQ=0.993378;CONSENSUS=TGAGACAGGGTCTTCCTCTGTCACCCAGGCTGGAATGCAGTGGCACAAATACAGCTCAGCCACCATGACTGGCTAATTTTTTTTTTTCTTTTTTTGTAGAGACAGGTCTCTCTATGTTGCCCAGGCTGGTCTTGAATTCCTGGGCTCAAGC;CE=1.97614;RDRATIO=0.785709	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-17.8784,0,-52.2761:10000:PASS:811:1455:823:2:0:0:17:7	0/0:0,-10.8301,-125.193:108:PASS:1803:3728:1624:2:0:0:36:0	0/0:0,-10.2298,-119.095:102:PASS:1585:3409:1423:2:0:0:34:0
chr1	14109814	DEL00000050	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=14111747;PE=8;MAPQ=60;CT=3to5;CIPOS=-163,163;CIEND=-163,163;RDRATIO=0.554582	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-36.6732,0,-100.175:10000:PASS:127:131:100:1:18:8:0:0	0/0:0,-9.63295,-192:96:PASS:137:282:134:2:32:0:0:0	0/0:0,-7.52574,-150:75:PASS:114:217:113:2:25:0:0:0
chr1	14110577	DEL00000051	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=14112445;PE=0;MAPQ=0;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=12;SRQ=0.995595;CONSENSUS=TGTGACCCATACAACTTACAACAGTGCTATGGTTTAGGCACTCTTATTATCCAGATCATTTTGTAGTTTTTTGACTTCTATTGCATATCTATCTATTTCTCTTAGGAGGTCTTGATTCCAAGAAGTGATGTCCTGGCTTTTAGGAGAAAGAACTTTGTTGGGAGCATGGCAGACACTCTCCTCTCACTCCCAGGGACCCTCACCCTTGTACGATCACTTCTCCATTC;CE=1.95846;RDRATIO=0.59767	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-45.1728,0,-37.973:10000:PASS:96:129:100:1:0:0:13:15	0/0:0,-9.32851,-111.897:93:PASS:127:272:120:2:0:0:31:0	0/0:0,-8.72465,-100.695:87:PASS:90:213:112:2:0:0:29:0
chr1	19758178	DEL00000063	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=19758303;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=8;SRQ=0.994413;CONSENSUS=TCCCTGGCCTCATGTTTCCATGTGAGGGACCATTTACCATGACACAGTCCCTGAAGTCTTGAAGTTTGAGGTTTCGGCTTCTGCAAAAGAAGTTATTAGATTCAGTAAACTTCCATGGAAAAAAAGGAGCTCCTTCCTTCCCCCATAGGAGCAAAGACTACTGTGCCCACGTGATAATCAA;CE=1.98946;RDRATIO=0.66071	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-7.22132,-84.9966:72:PASS:2326:3713:1840:2:0:0:24:0	0/1:-58.3633,0,-52.2639:10000:PASS:2200:3226:2856:1:0:0:18:20	0/0:0,-9.9291,-117.195:99:PASS:2361:4872:2684:2:0:0:33:0
chr1	20170696	DEL00000064	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=20171245;PE=0;MAPQ=0;CT=3to5;CIPOS=-7,7;CIEND=-7,7;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=10;SRQ=1;CONSENSUS=CTCGCTCTCAGCCCTGCTCCTGGGGGCAGGGGCTTGGCAAGGTGGGGGTGGGGATGACAGGGGCTGGCCTGGTCCTCACGGGCTGGGTCAGCTGAGGAGGTGTCACAGAAAAGACACTTTGCTTTAGGCCTGAGAAGGACCACACCAGAGAGCTCCAACTCAGGAAGTCTCCTTGAGCTCACGTGGGGAACAAAAGGGGGTTCT;CE=1.94894;RDRATIO=0.377622	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-8.42448,-98.0956:84:PASS:25:65:35:2:0:0:28:0	0/1:-38.1738,0,-42.274:10000:PASS:36:27:30:1:0:0:14:13	0/0:0,-9.3271,-108.095:93:PASS:35:65:34:2:0:0:31:0
chr1	20605515	DEL00000065	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=20606215;PE=9;MAPQ=60;CT=3to5;CIPOS=-57,57;CIEND=-57,57;RDRATIO=0.617783	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-24.8764,0,-80.6787:10000:PASS:46:46:36:1:18:6:0:0	0/1:-18.2823,0,-71.6804:10000:PASS:34:26:54:1:15:4:0:0	0/0:0,-11.4352,-185.396:114:PASS:47:79:40:2:38:0:0:0
chr1	22577954	DUP00000081	T	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=22578478;PE=5;MAPQ=25;CT=5to3;CIPOS=-266,266;CIEND=-266,266;RDRATIO=1.321	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-2.22471,-127.046:22:PASS:47:111:66:2:22:2:0:0	0/1:-0.683525,0,-67.4431:8:LowQual:53:88:57:2:12:4:0:0	0/1:-5.58353,0,-73.1866:56:PASS:51:109:33:3:13:3:0:0
chr1	23930981	DEL00000071	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=23932202;PE=28;MAPQ=60;CT=3to5;CIPOS=-81,81;CIEND=-81,81;RDRATIO=0.414365	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-91.063,0,-83.2011:10000:PASS:46:71:89:1:16:20:0:0	0/0:0,-10.235,-204:102:PASS:68:181:73:3:34:0:0:0	0/1:-56.8712,0,-93.5712:10000:PASS:68:75:73:1:17:11:0:0
chr1	24193858	DEL00000072	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=24197185;PE=44;MAPQ=60;CT=3to5;CIPOS=-113,113;CIEND=-113,113;RDRATIO=0.500813	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-153.27,0,-3.27014:33:PASS:190:21:218:0:2:27:0:0	0/0:0,-9.33192,-186:93:PASS:225:410:215:2:31:0:0:0	0/1:-98.367,0,-74.3671:10000:PASS:210:196:210:1:14:18:0:0
chr1	25287801	INV00000025	A	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=25405610;PE=5;MAPQ=52;CT=3to3;CIPOS=-389,389;CIEND=-389,389;RDRATIO=1.00182	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-31.9714,0,-86.5497:10000:PASS:5874:9916:6673:2:18:10:0:0	0/0:0,-7.82662,-146.2:78:PASS:6176:10716:7408:2:26:0:0:0	0/0:0,-7.82659,-146.9:78:PASS:5624:9778:6906:2:26:0:0:0
chr1	26133642	DEL00000075	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=26138279;PE=30;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.503467	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-4.21441,-84:42:PASS:283:502:262:2:14:0:0:0	0/1:-76.1732,0,-64.1732:10000:PASS:284:275:309:1:12:14:0:0	0/1:-86.9722,0,-51.8759:10000:PASS:289:244:279:1:10:17:0:0
chr1	26562904	DUP00000087	T	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=26565718;PE=19;MAPQ=60;CT=5to3;CIPOS=-107,107;CIEND=-107,107;RDRATIO=1.53591	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.63295,-192:96:PASS:178:336:167:2:32:0:0:0	0/1:-96.4495,0,-153.25:10000:PASS:177:540:184:3:28:21:0:0	0/0:0,-7.22471,-144:72:PASS:163:335:184:2:24:0:0:0
chr1	29678178	DEL00000079	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=29678234;PE=0;MAPQ=0;CT=3to5;CIPOS=-17,17;CIEND=-17,17;SRMAPQ=60;INSLEN=0;HOMLEN=21;SR=4;SRQ=1;CONSENSUS=GTAAAAGCAGCAGTGGGCATAGTAAGCACTAAATAAAGAAACGTTAGAAATCAGCATTGTCAGATTTTCTTTCTTTCTTTCTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTTGTCACCCAGGCTGGAGTGCAATGGCACAATCTC;CE=1.95118;RDRATIO=0.742239	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-35.579,0,-31.0771:10000:PASS:996:1394:864:1:0:0:12:13	0/0:0,-8.71767,-93.2878:87:PASS:1450:2594:1119:2:0:0:29:0	0/1:-22.0825,0,-32.5838:10000:PASS:851:1113:769:1:0:0:12:9
chr1	31908111	DEL00000081	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=31908198;PE=0;MAPQ=0;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SRMAPQ=60;INSLEN=0;HOMLEN=9;SR=14;SRQ=0.99537;CONSENSUS=AAAATAAAAACAAAACAAAAGGCTCTTGGCTACTTTGCCTAGTATTAGATAGGGTTTTGAAGAAACTAACATGAACACCCTTTCATCAGTAAAGACTAAAAACCACCTGGAATATATATATCACTGCTGTTTTTTTGGTGTTGTTTTTTGTTTTTTTTTTTTTTTATCTAAAAGTGCCCAGGTGGGCTTAAGGCTGCCAGACTGCACGCACATCT;CE=1.93145;RDRATIO=0.505173	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-1.50402,-16.6989:15:PASS:667:678:447:1:0:0:5:0	1/1:-61.8967,-2.51712,0:25:PASS:938:503:698:1:0:0:1:19	0/0:0,-1.80465,-19.7985:18:PASS:591:472:481:1:0:0:6:0
chr1	36958595	DEL00000085	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=36960193;PE=3;MAPQ=41;CT=3to5;CIPOS=-154,154;CIEND=-154,154;RDRATIO=0.532329	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-11.1876,0,-44.4335:112:PASS:69:92:98:1:8:4:0:0	0/0:0,-3.91338,-78:39:PASS:50:178:122:2:13:0:0:0	0/0:0,-3.0103,-60:30:PASS:63:142:106:2:10:0:0:0
chr1	37350877	DEL00000086	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=37351115;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=0.980861;CONSENSUS=TGAATGGGTTAGTGAATCCTTGTGTTTACTTATCTTGTCCTCCCCAAAGCTAAGAGGGCTGGACCCAACTCCCTCTGCAGATGCTTTTCCAGAACCCCTGGAACCCCTGGCAAACACAAATCTTTTTACCATCTCCATAGTTTTGCCTGAGAAACTATTTTTTAAACTAGAAAATTAGAGCATATGACCTCACCAAGTATGAATGTT;CE=1.96812;RDRATIO=0.782644	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-53.8677,0,-44.0684:10000:PASS:3526:4923:4246:1:0:0:15:18	0/0:0,-2.6295,-102.096:26:PASS:3788:9392:6065:2:0:0:31:2	0/1:-36.6705,0,-57.2687:10000:PASS:3594:5819:4206:1:0:0:19:13
chr1	37742573	DEL00000087	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=37742737;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=13;SRQ=0.995413;CONSENSUS=ATACCTGCAAGGAAGAAACAGTTCTTTTTCTGCCTCCGAATGGTAAGGATGTGATGTCTGGAGCTGCTGCAGCCACCTTGCTACCATGAGGGAACCAGCCTATGTGATGAGCTTTGAGAGGCATAGATGGGGGTCTTGCTTGAGGCCAGGAGTTAGAGACCAGCCTGGGCAACATAGCAATACTCCGTCTCTACAAAACAATTTAAAAAGAAAAAAAA;CE=1.98394;RDRATIO=0.521555	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-54.5723,0,-27.5741:10000:PASS:2041:2232:2064:1:0:0:10:18	0/0:0,-8.72657,-104.597:87:PASS:2907:5888:2942:2:0:0:29:0	0/0:0,-8.42527,-100.096:84:PASS:2424:5297:2657:2:0:0:28:0
chr1	38757090	INS00000002	G	<INS>	.	PASS	PRECISE;SVTYPE=INS;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=38757091;PE=0;MAPQ=0;CT=NtoN;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=57;HOMLEN=4;SR=7;SRQ=0.990654;CONSENSUS=CTCTCAGGATCTACTTGGATGAATCAGCTGGAGCTGGAGCTCCCTCAGGTAGACTGAGACAGGACCAGGGGCATAGCATCCAGAGGATGATCACTGGGATCCTGCCTTGACCCCCTCCCCACCACTGGTGAGGCCCATATGCTTCACAATCAAGCTTGATACTC;CE=1.98904;RDRATIO=1.00036	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.93026,-118.896:99:PASS:21946:44085:22138:2:0:0:33:0	0/1:-125.746,0,-37.5483:10000:PASS:19396:37774:18368:2:0:0:15:39	0/1:-112.953,0,-28.9553:10000:PASS:18911:38902:19976:2:0:0:12:35
chr1	45517815	DEL00000093	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=45517912;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=15;SRQ=0.977477;CONSENSUS=GGGTGCTTGCAGTGAGCTGAGATCGCACCACTGCACTCTAGCCTGGGCGACAAAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAACTATGACAACAGATATATACGTGACCCAAACAAACTGAACGAGCAGTGTCACAGCTCCAGAGATTTGAGTGAGCTCTGAGACTTTAAATGTAGAATGTCTCTTATAACAAGAGATAATGAGTATTTCTC;CE=1.9515;RDRATIO=0.489128	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-2.61756,-67.2225:26:PASS:1337:3114:1437:2:0:0:21:2	0/1:-28.3803,0,-31.58:10000:PASS:991:1460:1668:1:0:0:11:10	0/1:-55.9708,0,-29.4728:10000:PASS:1010:1420:1747:1:0:0:11:19
chr1	45741614	DEL00000094	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=45741927;PE=0;MAPQ=0;CT=3to5;CIPOS=-11,11;CIEND=-11,11;SRMAPQ=60;INSLEN=0;HOMLEN=10;SR=14;SRQ=1;CONSENSUS=CCTAACACATTTATGAAAAACTTACAATGAACCAGGTGCAGTATTAATTGCTTTATATGCTAATTTAACCCTTATTATAATCCCATGTGGTAGATATTATTATTTTTCTTATTTTCATATTAAAGAAACAGAATCAAAGTTTAAGTCACTTGTCCACAAGTTGCATGGTAAAGCAAGTTGCAAGGTAGGGGTTGACATCAAAGTCCAT;CE=1.89596;RDRATIO=0.657611	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-59.0723,0,-25.1725:10000:PASS:5970:5596:5714:1:0:0:10:19	0/0:0,-5.02518,-93.8954:50:PASS:6563:10074:7269:1:0:0:28:1	0/0:0,-5.41501,-61.6965:54:PASS:5163:7603:5362:1:0:0:18:0
chr1	51528170	DEL00000096	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=51528251;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=6;SRQ=0.98125;CONSENSUS=GCAAGACTCTGTCCCAAAAAAAACCAAGAAAGGTAACTCTATTCAGCATTATACTGGAGTATAATTTTCTATATATAGAAAATCCTAAAGAAACAAACAAAAATCTATTGGAATAAATGAGTTCAGCAAAGTTGCAAGATACAACATTAATATACAAAAA;CE=1.8;RDRATIO=0.558423	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-38.8765,0,-32.377:10000:PASS:1110:1174:934:1:0:0:11:13	0/0:0,-7.8227,-90.9959:78:PASS:1364:2497:1270:2:0:0:26:0	0/0:0,-10.8329,-129.096:108:PASS:1577:3459:1786:2:0:0:36:0
chr1	51580899	DEL00000097	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=51580955;PE=0;MAPQ=0;CT=3to5;CIPOS=-7,7;CIEND=-7,7;SRMAPQ=60;INSLEN=0;HOMLEN=8;SR=11;SRQ=0.994565;CONSENSUS=ACCGCTCAGAGATGACCATTGTTAACATTTTGATATACTGTATTTCCTTCTAGCCATTATATATACTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGACCTTTACTCACTGCAACCTTGTCTGTCAGGTTCAGGTGATCCTCCTACCTCAGGCACGTGCCACC;CE=1.97263;RDRATIO=0.349395	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-83.9708,0,-1.37347:14:LowQual:618:183:738:0:0:0:3:26	0/0:0,-1.50399,-16.5988:15:PASS:347:326:497:1:0:0:5:0	1/1:-40.9973,-3.60971,0:36:PASS:393:33:266:0:0:0:0:12
chr1	53128425	DEL00000099	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=53129277;PE=7;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=1;CONSENSUS=AAAATTTAAAAAATTAGCTGGGCATGGTGGCGTGTGCCTGTAGTCCCAGCTAATTGGGAGGCTAAGTCGGGAGGATCGATTGAGCCCTGGAGTTGAAAGTTACAGTGAGCTGTAATAACCTCGTGAAGGAGGTATTCTTCCCACTTTATAGATAAGGACACTGAGGCTCAGATGCTAAAAGGCTTGTTTACATTTGCACATCTAGAGGGTGACTCCAA;CE=1.97572;RDRATIO=0.455621	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-12.3369,-146.795:123:PASS:53:117:46:2:35:0:41:0	0/1:-79.0705,0,-6.07396:61:PASS:57:3:15:0:3:10:4:25	0/1:-58.6676,0,-40.4681:10000:PASS:54:49:37:1:17:4:14:19
chr1	54626600	DEL00000101	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=54630294;PE=31;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=14;SRQ=1;CONSENSUS=GTCCCCATGTTGCAGGCAAAGAAATCAAGGCTTGGAGAGGTCGAGACTTGTCCCAAGTCACCTCTATGTTAAGTTCAAATGCAGGCAAGCCCCCCACAGTCTGGCCATAAACTGGCCCCAAAACTGGCCATAAGCAAAATCTCTGCAGCACTGTAACATGCCCATAATGGCCCTAATGCCCACGCTG;CE=1.97683;RDRATIO=0.513711	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.93062,-120.197:99:PASS:233:430:228:2:40:0:33:0	0/1:-38.4737,0,-42.6737:10000:PASS:200:207:232:1:18:15:14:13	0/1:-41.472,0,-44.6718:10000:PASS:225:194:216:1:19:17:15:14
chr1	60822424	DUP00000106	A	<DUP>	.	PASS	PRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=60822663;PE=0;MAPQ=0;CT=5to3;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=20;SRQ=0.982906;CONSENSUS=TAATTCCCTGAAAATATCAGGTGCATAGTTTGATGTGTCTAATCAAACTTATACAGCACTTAAGTGTGTGTTTCAAAATAAATATTCAATACATATTGATATGATTTATTAATACCTAGTTTTCTTAGGAAAAGAAGGTGAAGCAGTCAGGTGAAGATAGTACCATTTGCTGAGCTAAGCAATACTAGCAAAAGTGGGGACCATGAGTTCATTTGGGAATATTTTAAGTTTGGG;CE=1.89918;RDRATIO=2.07493	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.92903,-116.595:99:PASS:4406:8150:5367:2:0:0:33:0	0/1:-42.1577,0,-90.5562:10000:PASS:3571:11766:3627:3:0:0:29:16	0/1:-27.9647,0,-82.8633:10000:PASS:3858:13957:4208:3:0:0:26:11
chr1	65558506	DEL00000116	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=65564585;PE=9;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.684996	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-47.6786,0,-53.0784:10000:PASS:378:268:351:1:12:9:0:0	0/0:0,-8.12712,-127.599:81:PASS:417:322:395:1:27:0:0:0	0/0:0,-5.71861,-84.699:57:PASS:375:395:361:1:19:0:0:0
chr1	65670034	DEL00000117	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=65670365;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=19;SRQ=0.990654;CONSENSUS=TATATAAAATATTTAACATCATCAAGCAACTATTCATAATTACATTTATAAAAGACTCCACCCAAACAGCAGAATATGCATTTTAAAGGATGCACATAAAACATTAACCAATATGGGCTGTATTCTGAGCCATAAAACAAATTTGAATACATTTAAAAGAATTCAAATCATACAAAGCAAGTTCTTTTTATTCAATGGGATTAAACTACATTC;CE=1.80737;RDRATIO=0.406386	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-2.41724,-62.5968:24:PASS:5486:9081:6505:2:0:0:19:1	0/1:-42.3785,0,-21.7795:10000:PASS:5458:3667:6457:1:0:0:8:14	0/1:-29.981,0,-29.1805:10000:PASS:6648:3423:5413:1:0:0:10:10
chr1	66986550	INV00000057	T	<INV>	.	PASS	PRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=66986952;PE=27;MAPQ=60;CT=5to5;CIPOS=-6,6;CIEND=-6,6;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=20;SRQ=0.995327;CONSENSUS=GAAGTCAAGTGTTGCAAAGTGGCTTTTAACACTGTTTGGGAAAAAAAGTTGTTCACATTGGTGAAGGGAAGCAGTCCGAACATATGTTAACAGTAATACTTCATGGGGGTAAGGCCTGAATGCCATTTTCACCTTTTTAAAAAGATGCATTTTATTTGCAGGTTTGTGAAGTTCTTGCAAACTCTTACTACAGAAATGTTTTAAATAAATTCTC;CE=1.92944;RDRATIO=1.24234	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.62923,-114.896:96:PASS:7740:15977:6761:2:35:0:32:0	0/1:-61.0455,0,-108.244:10000:PASS:8640:27224:11249:3:45:36:35:22	0/1:-40.058,0,-91.0566:10000:PASS:7245:21086:9018:3:37:16:29:15
chr1	69545466	DEL00000123	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=69546746;PE=22;MAPQ=60;CT=3to5;CIPOS=-7,7;CIEND=-7,7;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=18;SRQ=1;CONSENSUS=AAAGATAGTTTAAGTCATAGAGGGCTCTGCCTTTCCTGCATGAATTGATGCTGTTATCATGGGAATGAGTTAGTTATCAAGGGAGGGGACTCCTGATAAAAGGATGAGTTTGAACCCCATGAATCTGTAAAATTTAAGAAAATGCATAATTAAGTGTAACTTAAAATTGTTGGTTTTTTTTCAGTAATAACAAAATATCTGGCATGAGGTAGCCCAGGATTGAT;CE=1.91436;RDRATIO=0.501935	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-6.31861,-73.797:63:PASS:81:159:69:2:22:0:21:0	0/1:-31.2749,0,-46.2747:10000:PASS:88:83:80:1:18:10:15:11	0/1:-44.1738,0,-34.4753:10000:PASS:81:83:75:1:16:14:12:15
chr1	80328942	INV00000063	C	<INV>	.	PASS	PRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=80329422;PE=18;MAPQ=60;CT=5to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=14;SRQ=0.989583;CONSENSUS=TGTTGTTGTTTATTCTTTCACCAATACCACACTACCTTGATTACTGTAGCTCTGTGGTAAGTTTTGACGTATGGTAGTATACACACACACACACACACACACACACACATATATATATTTACATACATAAAACCACTCACTGGATAAAGTTTTTGAAACACATATGAATGAAGGAGATTTACTATCTTAA;CE=1.90209;RDRATIO=2.08528	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-3.61072,-42.2984:36:PASS:6227:5163:5923:1:13:0:12:0	0/1:-23.3757,0,-52.1747:10000:PASS:8352:10418:6534:1:16:10:17:9	0/1:-45.2763,0,-25.2774:10000:PASS:7754:11920:5698:2:9:23:9:15
chr1	80956849	DEL00000134	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=80958750;PE=25;MAPQ=60;CT=3to5;CIPOS=-55,55;CIEND=-55,55;RDRATIO=0.559675	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-4.81647,-96:48:PASS:126:218:88:2:16:0:0:0	0/1:-67.2701,0,-87.2702:10000:PASS:106:118:111:1:16:13:0:0	0/1:-64.4743,0,-70.4743:10000:PASS:114:126:107:1:13:12:0:0
chr1	81514046	DEL00000135	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=81514168;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=20;SRQ=1;CONSENSUS=TCTTCTGTGAATCTTCACAACCCAGTGGAGTAAACGGCAGGTGTGAACTGTTGAGACACAGGCTCCCACAATGGAGCATTACTGAGGGTTGGGAAGTAATCCAGTCAAATCAAGCTCTGGAGGCTTAGTTTGTATAGCAATCTCAGTTTTTACCTAGGTGGTATGGTTGTTTTGGATTGCATATTATGTTTGTTTAGAGTATATATTTATT;CE=1.94913;RDRATIO=0.690197	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-7.52319,-90.7974:75:PASS:2184:3878:2233:2:0:0:25:0	0/1:-62.9633,0,-48.4637:10000:PASS:2654:2719:1833:1:0:0:17:21	0/1:-31.8776,0,-36.2778:10000:PASS:1781:1773:1632:1:0:0:12:11
chr1	81619563	DEL00000136	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=81619615;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=14;SRQ=1;CONSENSUS=AGGGATCAATGTAAAATTCCACAAATCAGATGCACTTCTGCTCCCTAACCCCACTGGAAAATTGTCTGAAGTTTTCTTAGTTGCCTCATTTTGTGATCCTCATGAGAGGATGAAATAACATACAGTGATATGTCTTCTAAAAAGATTATTAATTTGTATTATTTCTATAAAT;CE=1.90857;RDRATIO=0.608219	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.62801,-112.895:96:PASS:1022:2103:1123:2:0:0:32:0	0/1:-66.0602,0,-55.3605:10000:PASS:927:1325:1295:1:0:0:19:22	0/1:-76.9588,0,-46.66:10000:PASS:1043:1080:870:1:0:0:17:26
chr1	84246327	DEL00000142	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=84250187;PE=26;MAPQ=60;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=16;SRQ=0.979592;CONSENSUS=GAATCGTGCTTTTGTACTTCTGGAATTGATAGTGATCAAACACACTCTCCCTAGCAAGTGGCGGACCACACAATGAAAAGTCGTTGTGCACAATAGAAGACTATTGCGTAGCTACCTATACACAAATGAAGACAGATCTTGCAAACTGGAAAGAAATGAATAAACAACTCAAATGCAGCATAGAGAGGTTAAAAG;CE=1.93891;RDRATIO=0.498751	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-8.72591,-103.296:87:PASS:238:466:238:2:35:0:29:0	0/1:-31.4744,0,-48.3734:10000:PASS:258:241:243:1:16:11:16:11	0/1:-49.6734,0,-31.5739:10000:PASS:249:229:220:1:16:15:11:16
chr1	85440802	DEL00000143	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=85440877;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=1;CONSENSUS=TTTCCAATCCGGGAAGTGGACGTCTGTAATACAACATAAATTACAAAGTTTCTGATTTTACTGTCTAGACACCATCAACCCCCTTAACACTACCTTCTCTGTCAAAAGTCTGGGCAGAGCACATTTGAAGCCAACAAAAAGCAGGATTGGAAAATTAAGAATGGTTAAGAGAGAAAGAGGGCAAGTACAAAACTCACAAATTCACAAGGCTCAATG;CE=1.94132;RDRATIO=0.586758	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.32752,-109.996:93:PASS:1470:2806:1169:2:0:0:31:0	0/1:-59.2594,0,-65.8592:10000:PASS:1523:1896:1516:1:0:0:22:20	0/1:-50.6743,0,-28.1748:10000:PASS:847:1060:871:1:0:0:10:16
chr1	87820157	DEL00000146	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=87820312;PE=0;MAPQ=0;CT=3to5;CIPOS=-1,1;CIEND=-1,1;SRMAPQ=60;INSLEN=0;HOMLEN=0;SR=5;SRQ=0.980132;CONSENSUS=AAAGAGAATTTTAAGTTAGAGAGAATAGGATCCCAGGAGTATTTCATTCCTCCTATTTCCACCTAACCCTGTAACCCCTTGCTAGTCAAGGGGTTACATTTATGAGACTGTTCAGTTCTCTGAGGCTGTAGCTGAAAATCAGGAAAGCCTT;CE=1.97676;RDRATIO=0.612373	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-25.2791,0,-39.9785:10000:PASS:1729:2299:2149:1:0:0:13:9	0/0:0,-11.1333,-131.895:111:PASS:3655:6128:2675:2:0:0:37:0	0/0:0,-8.12459,-96.8968:81:PASS:2154:5058:3382:2:0:0:27:0
chr1	89010263	DEL00000147	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=89012891;PE=9;MAPQ=60;CT=3to5;CIPOS=-214,214;CIEND=-214,214;RDRATIO=0.490751	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-37.3732,0,-94.1745:10000:PASS:159:161:148:1:17:9:0:0	0/0:0,-8.72986,-174:87:PASS:172:313:179:2:29:0:0:0	0/0:0,-10.235,-204:102:PASS:158:327:148:2:34:0:0:0
chr1	89345735	DEL00000148	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=89346608;PE=10;MAPQ=60;CT=3to5;CIPOS=-74,74;CIEND=-74,74;RDRATIO=0.549655	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-43.6691,0,-116.969:10000:PASS:64:58:50:1:21:9:0:0	0/0:0,-5.74015,-222:57:PASS:58:112:63:2:38:1:0:0	0/0:0,-10.536,-210:105:PASS:57:88:51:2:35:0:0:0
chr1	91766504	DEL00000153	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=91767777;PE=26;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=1;CONSENSUS=CACATGTATATGTCTTTACCAACAACAGAATGTTAGAATGGCCTGTGCATCAGTACTGTGATGTATCAAACTGCATAATAAAGAGAATCACTAGAGTGATTTTACTCCTGGAAACTATATACAAACTCAGCAAAGTAACTTCTCAATTCTTTCTGGAAGGAGGGATAAATGCATTAATTACTGTTTTGTATTTTCACATTGGATCACAGAAAAAAA;CE=1.91495;RDRATIO=0.443114	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-50.0717,0,-37.2724:10000:PASS:70:73:76:1:15:12:13:17	0/1:-59.7649,0,-48.1652:10000:PASS:78:81:100:1:15:16:17:20	0/0:0,-8.12457,-96.7968:81:PASS:69:167:79:2:32:0:27:0
chr1	92215796	DEL00000154	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=92215849;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=20;SRQ=1;CONSENSUS=GATATTTGGAATTTGTCAGCACATGGATGATATCTAACACTATGAGTTAAGGAGGACACCAAAGTAACAAATATACCCAGAGAAGAAAAGAGGTCCAAGGACTGAGCTTGCGGCACATAAATGGCCAGTGAGGCTGGAGGGAAACCATGAGAGCATGATATGGGGAAGCCAAGGAAAGAAAGTTTTTCCAGGAGGAGGGAATGATCAACTGTAACAAGTACTG;CE=1.91749;RDRATIO=0.683921	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-83.756,0,-50.1567:10000:PASS:1018:1091:1012:1:0:0:18:27	0/1:-55.7631,0,-57.3636:10000:PASS:998:1282:995:1:0:0:19:19	0/0:0,-8.12448,-96.6967:81:PASS:851:1724:982:2:0:0:27:0
chr1	93822816	DEL00000157	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=93825701;PE=9;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=15;SRQ=0.995495;CONSENSUS=GCAGGGACCTGAACATGAAGGGCATTTGATGTCTTGCTACAGAGTTTGATTTTTTTTTTTCCTGAAAGTGAGACAAAGTTATCTGTAACAGACACCTATGCTTACCTACCCAGCCCCCAGGCCATGCGAGCAGAGGAGAGGGTATCATTTAAAGGGCCCGCAGCAGCAAAGAGGCTTTCTCTGCTCTGTCTTTGACCCATCTCTGTTCTGGGTAACTTCACT;CE=1.99561;RDRATIO=0.512278	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.32823,-110.996:93:PASS:187:322:181:2:37:0:31:0	0/1:-62.2659,0,-42.866:10000:PASS:186:192:192:1:19:9:15:20	0/0:0,-9.02614,-106.195:90:PASS:177:351:177:2:32:0:30:0
chr1	94477682	DEL00000158	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=94477760;PE=0;MAPQ=0;CT=3to5;CIPOS=-1,1;CIEND=-1,1;SRMAPQ=60;INSLEN=0;HOMLEN=0;SR=11;SRQ=0.97;CONSENSUS=GAGGTGCAAGCAGTGGCTGTTGACTTAAAGTGAATGAACACAATTTGTGTTTCTTGAAAAACATTTCAAACTAATGCAGCTGATGGTGCTTGAACAATCAATGGCTTACTTGATTATTTTGCCATGGAAGTGATAAAGTAATAGAGTCAAACAATATTGGAGCAGGAAAAGCTCCTCACTTTACAGGTGAAGATA;CE=1.93317;RDRATIO=0.747316	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-37.3624,0,-80.4607:10000:PASS:1336:2469:1546:2:0:0:26:14	0/0:0,-11.1328,-130.695:111:PASS:1829:3770:1866:2:0:0:37:0	0/0:0,-10.5313,-124.095:105:PASS:1631:3595:1505:2:0:0:35:0
chr1	96530825	DEL00000160	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=96531660;PE=5;MAPQ=60;CT=3to5;CIPOS=-232,232;CIEND=-232,232;RDRATIO=0.502211	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.63295,-192:96:PASS:54:100:50:2:32:0:0:0	0/1:-27.8722,0,-117.872:10000:PASS:50:55:52:1:21:6:0:0	0/0:0,-10.536,-210:105:PASS:48:102:47:2:35:0:0:0
chr1	98578712	DEL00000162	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=98579196;PE=0;MAPQ=0;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=9;SRQ=0.983146;CONSENSUS=AAGTGCTGGGATTACAGGTGTGAGCCACCGTGCCTGGCCAAGCACAAGTACTTTTTATATATTCACCTGGCATCCTGCAATATATATGTGATAGGCAGTTTTTTTATTCTCACTCTCCTTCCACCCTCCACCCTCAAGTAGGTGCTGGTGTCTGTTATTCCCTTCTTTGTGTTCA;CE=1.95746;RDRATIO=0.409968	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-54.868,0,-43.3685:10000:PASS:9052:8707:10175:1:0:0:15:18	0/0:0,-11.1334,-132.395:111:PASS:8872:19208:12660:2:0:0:37:0	0/0:0,-8.42487,-99.396:84:PASS:7966:18427:8716:2:0:0:28:0
chr1	106860503	DEL00000169	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=106862733;PE=11;MAPQ=60;CT=3to5;CIPOS=-7,7;CIEND=-7,7;SRMAPQ=60;INSLEN=0;HOMLEN=11;SR=11;SRQ=1;CONSENSUS=GCCCAGTCAAGGTCCTGAGTTGGATTTTTACAATTTTCTATTTTGGCCTTAAGGAGACTACAGTAGCACCAAGAATCTTGGACCACATAACTATTTTCAAAGGTAGGAAACACTGGGAACACTGCGTTTCCTTTCCTTTATGGAGAATTGGACCAAGACACTTAAAAGTATTAAAAGAAAGAATATTCAGGAAAACTGACAGTAA;CE=1.94907;RDRATIO=0.589782	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-5.41624,-63.9977:54:PASS:134:248:130:2:28:0:18:0	0/1:-37.7739,0,-41.674:10000:PASS:155:155:121:1:17:11:14:13	0/0:0,-7.2216,-85.0969:72:PASS:119:259:153:2:30:0:24:0
chr1	107860349	DEL00000170	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=107862863;PE=13;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=3;SRQ=1;CONSENSUS=GAGACAGAAATGATAATTTTTCAATAGTAGATATATGAGCGGTGATTTTTAATAGAAATGATAAACCCCAAATTTCTAAGTGTTCTACCA;CE=1.85781;RDRATIO=0.466163	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-12.2822,0,-44.281:123:PASS:159:163:157:1:16:14:14:5	0/0:0,-10.5314,-125.195:105:PASS:145:341:172:2:41:0:35:0	0/0:0,-9.32832,-111.496:93:PASS:146:322:145:2:33:0:31:0
chr1	109030609	DEL00000172	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=109032559;PE=6;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=8;SRQ=1;CONSENSUS=CACAGTCATTATAAACCTTATAGTTATGACAAAAGTGCTTAATAAAGGCTCCATTAATCTGCAATTCCATCTCACACAATAAAAACTGCTCTCTTTAATCTGCAGAAAAGGTAAAGAAAAAAAATTGTCAACTTTGACACTAAAAATGTAAAATGTAGACCAGGCATGGTGGCTCACACCTGTAATCCCA;CE=1.89777;RDRATIO=0.392587	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-42.9763,0,-29.177:10000:PASS:116:112:109:1:15:6:10:14	0/0:0,-7.52253,-89.0968:75:PASS:100:265:109:3:24:0:25:0	0/0:0,-6.01601,-69.9954:60:PASS:112:233:108:2:28:0:20:0
chr1	115686862	DEL00000181	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=115690220;PE=7;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=7;SR=4;SRQ=0.993289;CONSENSUS=TACCAATAGTAATAATAGCAATTTAGTCTGGCCTCTTCATATGACAGGTACTGTTTTAAGCACATCACGTGAATTAACTCTTTCAGTTCCTCTACACTTGTTTACTGTTGAAAGTAAAGGGTCACACGAGAGTCAGTGATTACAGGAGC;CE=1.95953;RDRATIO=0.4955	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-8.1251,-98.2973:81:PASS:197:403:192:2:35:0:27:0	0/1:-22.6816,0,-34.1815:10000:PASS:223:231:227:1:17:7:11:8	0/0:0,-8.42468,-99.1958:84:PASS:217:395:229:2:38:0:28:0
chr1	116459540	DEL00000183	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=116459671;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=14;SRQ=1;CONSENSUS=TAGAAGTAGAATGGTGGTTGTTGGGGCTGGGAGAGGAGAAAATGGGGAGTTTTTTTTAACAGGTATGGAGTTTTGGATTGGGAAGATGAAAAAGTTTGGAGTTTGGCTCTGTCACCCAGGTTGCAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCTGCCTCCTGAGTTCAAGCGATTCTCCTGCCTTAGGCTCCTGAGTAGCTG;CE=1.94901;RDRATIO=0.652546	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-16.8838,0,-34.0831:10000:PASS:1275:1968:1695:1:0:0:11:6	0/0:0,-12.0356,-141.394:120:PASS:3109:6376:3170:2:0:0:40:0	0/1:-37.4732,0,-44.4732:10000:PASS:2289:2587:1680:1:0:0:15:13
chr1	118731590	DEL00000185	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=118731647;PE=0;MAPQ=0;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=19;SRQ=1;CONSENSUS=TATTTTATAGCTAAAATATTACTAAATACTAGTATATTTATATTATTTTATATATAGTATGTAATATATAACTATAATATTAAATAAATTTATATATAATACATAATATATAACTATTAATTATATTAAATATAGTATATAACTCTATAATATTAAATATAATATACCATATATAATTTATACTATATGTAATATATATTATATATATAGTATTACTAGTATA;CE=1.43267;RDRATIO=0.559903	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-6.3191,-75.4975:63:PASS:771:1591:645:2:0:0:21:0	0/1:-33.3786,0,-32.8785:10000:PASS:677:729:627:1:0:0:11:11	0/1:-46.7762,0,-25.677:10000:PASS:553:748:636:1:0:0:9:15
chr1	121754939	DUP00000129	A	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=121755464;PE=6;MAPQ=29;CT=5to3;CIPOS=-295,295;CIEND=-295,295;RDRATIO=3.05747	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-3.5647,-58.5627:36:PASS:7:290:3:58:22:6:0:0	0/1:-2.93902,0,-10.1982:29:PASS:0:133:2:133:6:6:0:0	0/1:-13.2226,0,-61.8668:132:PASS:2:266:1:177:30:19:0:0
chr1	121764691	DUP00000132	A	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=121765191;PE=8;MAPQ=25;CT=5to3;CIPOS=-303,303;CIEND=-303,303;RDRATIO=2.77588	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-23.8516,0,-29.1404:10000:PASS:2066:62180:5266:17:24:29:0:0	0/0:0,-11.8341,-221.135:118:PASS:37001:77278:5054:4:92:14:0:0	0/0:0,-2.55375,-125.196:26:PASS:10163:62361:10249:6:47:11:0:0
chr1	143202455	DUP00000149	C	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=143202905;PE=18;MAPQ=20;CT=5to3;CIPOS=-369,369;CIEND=-369,369;RDRATIO=1.40928	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-14.5151,0,-140.399:145:PASS:23973:1886288:4367:133:108:62:0:0	0/1:-13.5012,0,-211.223:135:PASS:34458:1996026:6665:97:127:55:0:0	0/0:0,-16.8272,-312.924:10000:PASS:35894:2098542:8539:94:183:50:0:0
chr1	143252719	DUP00000166	T	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=143253308;PE=80;MAPQ=22;CT=5to3;CIPOS=-199,199;CIEND=-199,199;RDRATIO=1.49007	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-39.4562,0,-659.769:10000:PASS:34:8308:455:34:368:97:0:0	0/0:0,-23.8619,-697.208:10000:PASS:86:6898:578:21:409:71:0:0	0/0:0,-40.5863,-884.002:10000:PASS:85:8084:624:23:473:76:0:0
chr1	157917497	INV00000097	G	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=157918101;PE=12;MAPQ=60;CT=3to3;CIPOS=-240,240;CIEND=-240,240;RDRATIO=1.1283	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-26.1712,0,-123.571:10000:PASS:32:50:34:2:22:6:0:0	0/1:-25.8702,0,-126.87:10000:PASS:35:45:40:1:23:6:0:0	0/0:0,-9.63295,-192:96:PASS:29:47:41:1:32:0:0:0
chr1	157917619	INV00000098	T	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=157917800;PE=7;MAPQ=54;CT=5to5;CIPOS=-422,422;CIEND=-422,422;RDRATIO=1.46357	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-46.6784,0,-58.1785:10000:PASS:1471:3317:2853:2:11:10:0:0	0/1:-15.6866,0,-50.0866:157:PASS:929:3626:2206:2:9:4:0:0	0/0:0,-5.1175,-102:51:PASS:2481:3689:2187:2:17:0:0:0
chr1	158757031	DEL00000213	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=158758203;PE=9;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.492956	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-5.93604,-199.4:59:PASS:65:133:81:2:34:1:0:0	0/1:-75.5598,0,-132.26:10000:PASS:74:89:77:1:24:15:0:0	0/0:0,-11.1381,-222:111:PASS:60:165:78:2:37:0:0:0
chr1	158991561	DEL00000215	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=158996412;PE=20;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=18;SRQ=0.994845;CONSENSUS=TCAAGTCTTATGTGGTCTCCACCTTTCTGAGTTTTTAAGAATAACAGCAGAGGTTGCAGTAAGCCGAGATGGTGCCACTGCACTCCAGCTTGGGTGACAGAGTGAGACTCTGCATGGTTGTCCTTTCTACCAGGTACCGTCTTACCCAAACCACACTTTCAATTTCCCCAGCCTGCCCTGAGGGCACAGACCTG;CE=1.99364;RDRATIO=0.469996	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-83.5563,0,-52.4556:10000:PASS:316:316:307:1:18:20:19:27	0/0:0,-7.5213,-87.2955:75:PASS:289:654:317:2:26:0:25:0	0/0:0,-7.22165,-85.4969:72:PASS:320:587:317:2:35:0:24:0
chr1	159678917	DEL00000216	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=159679868;PE=13;MAPQ=60;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=15;SRQ=1;CONSENSUS=ATACATGTGTATTATATGTCATACATATACATATATGTACCAGAACATTTATATCATGAAAGCATAGCCATATGTTTATATGAGTCCTCTCTTGCTAGACTGAGGGCTATCGAATTAAAATAAAACCTATCCAGGGTGCAATTTTGACTAGCAATACATAAAATGTCACAACAAACATAACGTTTCCTGGAGTACCTTTGATACTCTAGG;CE=1.91496;RDRATIO=0.373349	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-1.9239,-81.7971:19:PASS:50:117:43:3:30:1:25:2	0/1:-44.8751,0,-30.3755:10000:PASS:72:62:60:1:13:12:11:15	0/0:0,-8.42514,-99.2963:84:PASS:57:105:50:2:34:0:28:0
chr1	165185579	INV00000100	A	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=211535074;PE=4;MAPQ=31;CT=3to3;CIPOS=-494,494;CIEND=-494,494;RDRATIO=0.994123	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-7.47941,0,-84.0167:75:PASS:2696825:5609685:0:4:15:5:0:0	0/0:0,-5.41852,-106.5:54:PASS:2900444:6068904:0:4:18:0:0:0	0/0:0,-6.32162,-125.9:63:PASS:2697807:5640468:0:4:21:0:0:0
chr1	167102932	DEL00000226	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=167102996;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=13;SRQ=0.994792;CONSENSUS=CAAGTCAGCAAATACCTCACCACCGGACTCTTAGTCCTTGTACTAGTTTCCTAGGGCTGCCACAGCAAATTACTGAAATCAAGCTGGTGACAGAGCCACACAGCCTCCAAAGACTCTAGGGAAGACTCCTTCCTTGTCTCTTGCTCGTTTCTGTTGGCTCGGGCGTTTCTTGCATTGTGGCAGCATAATTC;CE=1.98876;RDRATIO=0.589167	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-7.82373,-93.3969:78:PASS:1015:2094:1229:2:0:0:26:0	0/1:-53.9669,0,-46.8672:10000:PASS:892:1253:1263:1:0:0:16:18	0/0:0,-9.3287,-112.497:93:PASS:1368:2558:1224:2:0:0:31:0
chr1	169038512	DEL00000230	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=169038612;PE=0;MAPQ=0;CT=3to5;CIPOS=-6,6;CIEND=-6,6;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=14;SRQ=1;CONSENSUS=ACTGTAAAAAGAGTCAAAGAAGGTCATTGTATAATGATAAAGGGATCAATTCAGCAAGTGGATAAAACAATTAAAATATCTGTGCACTCTCAGTAATGGCCATATCATCCAGACAGAAAATCAACAAACACTCGATTTAAACTACACACTAGATCTAATCAGCCTAACCGACATTTATAGATCATTTAAC;CE=1.8787;RDRATIO=0.451845	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-39.6784,0,-25.5789:10000:PASS:1364:1271:1188:1:0:0:9:13	0/0:0,-6.03979,-141.296:60:PASS:2300:5024:2258:2:0:0:41:2	0/0:0,-8.12455,-96.3967:81:PASS:2113:3094:1579:2:0:0:27:0
chr1	171936868	INS00000009	A	<INS>	.	PASS	PRECISE;SVTYPE=INS;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=171936869;PE=0;MAPQ=0;CT=NtoN;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=60;HOMLEN=3;SR=5;SRQ=1;CONSENSUS=GATACCCAGTAACAGAAATCAGAAAACTTGTTTGGAGGCACCAAGTAAGCAATGAGGTAATGTGGAGACACAAAGTTCAGGCAGCAGGTCTGAGAAGAAAGGCTTGAGAAGGTGGTGAATCATCACATTCTGGGAGAGGGGCTCCACAATG;CE=1.93102;RDRATIO=0.999847	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.62914,-114.496:96:PASS:22170:39712:17545:2:0:0:32:0	0/1:-104.853,0,-35.5552:10000:PASS:23100:43705:20615:2:0:0:14:33	0/0:0,-7.52248,-89.3967:75:PASS:18260:38353:20114:2:0:0:25:0
chr1	174827418	DEL00000235	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=174832707;PE=16;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=14;SRQ=1;CONSENSUS=CTCTAATCTCTTTTTATAAGGACACCAGTCATATTGGATTAGAGCCCACCCTAAGGACCCATTTTAACTTAATTGTCTCTTTAAAGGCCTTATCTCCCAATACAGATACTGGCTGTCTCTGTGTGTTCATGACTTTTGCTGGCACATCTGTAGCCCCAGGTCCCTTTCTCCAGCTTGCCACTCCTACATATTTTTCCCTTATGATTCTATGCTGTT;CE=1.92545;RDRATIO=0.502304	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-3.22872,-98.5977:32:PASS:335:627:287:2:35:1:29:2	0/1:-43.368,0,-55.168:10000:PASS:364:365:329:1:24:16:18:15	0/0:0,-9.02714,-106.796:90:PASS:336:691:323:2:40:0:30:0
chr1	179360614	DEL00000238	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=179364626;PE=19;MAPQ=60;CT=3to5;CIPOS=-64,64;CIEND=-64,64;RDRATIO=0.528324	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-53.8722,0,-81.8777:10000:PASS:239:230:231:1:15:12:0:0	0/0:0,-8.72986,-173.4:87:PASS:274:498:239:2:29:0:0:0	0/1:-35.7784,0,-71.7067:10000:PASS:234:239:232:1:13:8:0:0
chr1	179638157	DEL00000240	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=179638925;PE=20;MAPQ=60;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=20;SRQ=0.990868;CONSENSUS=AACAATAAGGAAGTGACGTTAGCACCAGGTGAGGTTGCAGGAGTCAGGAAGGGGGAGAGAGTGACTGATGTGATGCTGGAAGACTAAGAAAAAGCTAGATTCTGAATACCATGGGTAAATACCCAGTTAAAATTTGGGGGACTCTGTTGCTAGAGAAAAGGGAAAGAGGAGAATGGGCATTGAGGAACAACTGGCATGTCTTCCATATAGTTGGAAAT;CE=1.90215;RDRATIO=0.471698	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-56.6661,0,-46.1666:10000:PASS:39:41:47:1:16:11:16:19	0/0:0,-9.62872,-113.496:96:PASS:53:106:47:2:37:0:32:0	0/1:-60.9705,0,-26.0722:10000:PASS:47:48:49:1:12:10:10:20
chr1	185040669	DEL00000245	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=185042602;PE=28;MAPQ=60;CT=3to5;CIPOS=-9,9;CIEND=-9,9;SRMAPQ=60;INSLEN=0;HOMLEN=9;SR=20;SRQ=1;CONSENSUS=TGAAAAGGTCGTAAATCTCAAGTTGCCTGCTTCCTGGAGCCACCCTGAATTATAGGTCTCTCTAGGCCTTTCTACAATGTCCCCACTTAACTTGGCTCTTTCAAAGAAAGCACAACACATTTAACATGCAGATAGAGTGTTACTAGAAAATGTTTTTTAGAACGATATCTGTTATGTCAGGTCAAAACATTAGCAAAAATAATGTGGTCTGGATATGTGAATCACTA;CE=1.95643;RDRATIO=0.682219	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.32716,-108.895:93:PASS:132:217:125:2:37:0:31:0	0/1:-34.5723,0,-54.1703:10000:PASS:136:131:116:1:21:15:18:12	0/1:-42.4735,0,-39.2738:10000:PASS:116:125:101:1:12:13:13:14
chr1	185814580	DEL00000248	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=185816166;PE=15;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=16;SRQ=0.995495;CONSENSUS=GAATATCTGCTTTCATGCTTCTTTTCTTACTAAAACAATAACTTAACCTAGTCAGTAGAAAATAAATTTCATGTTTGGTGATATTTAGTCAGTTGGCCACTGGGGAGAATGGAAGATTGAGGGACTCAAAGGAAGAACAAATTATAGGCAGTTACTGACACAGATCCATCAATCCATGTGCTAAGCTGACTTTGTAAAATGGCCAGTGATATCTCCTTTTAC;CE=1.94544;RDRATIO=0.492509	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-6.91957,-80.9959:69:PASS:85:167:102:2:29:0:23:0	0/1:-67.7581,0,-61.058:10000:PASS:120:106:121:1:21:15:21:23	0/0:0,-12.3372,-146.895:123:PASS:114:187:107:2:45:0:41:0
chr1	186200437	DEL00000249	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=186200504;PE=0;MAPQ=0;CT=3to5;CIPOS=-1,1;CIEND=-1,1;SRMAPQ=60;INSLEN=0;HOMLEN=0;SR=11;SRQ=0.995146;CONSENSUS=AAGGCATGAACCCAGGAGGCGGAGCTTGCAGTGAGCTGAGATTACGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTGTCTCCAAAAAAAAAATGGGGGGGACTGAGTCTCACTCTGTTGCCCAGGCTGGACTGCATTGGCATGATCTCGGCTCACCACAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCT;CE=1.98395;RDRATIO=0.600463	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-4.51251,-51.9971:45:PASS:526:1542:866:2:0:0:15:0	0/1:-38.8797,0,-21.5804:10000:PASS:776:888:559:1:0:0:8:13	0/1:-14.9913,0,-11.3914:114:PASS:371:334:446:1:0:0:4:5
chr1	187746973	DEL00000253	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=187753402;PE=23;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=14;SRQ=1;CONSENSUS=TTTAGTTGAGTATTAACTTTATAACTAAGCAATCTTATATGGCCTGTAGACTGAGTCCAGTAAGAAAGGTGAAAGTTCTGTTCAGTGCTTCACTCAAGAAAAGTTGCATGAGAAAAACATAAAACTTCAAAAATCTTGATATCTGATGAAGAAATCACAAAAGATTAAAATTGATAAATAATCTATTGGTATATTAGAGTATGTTAAATAATTATT;CE=1.8329;RDRATIO=0.523278	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-30.6736,0,-54.8715:10000:PASS:383:399:379:1:19:12:18:11	0/0:0,-5.02669,-96.9969:50:PASS:378:812:414:2:38:0:28:1	0/1:-20.9798,0,-40.4807:10000:PASS:394:419:387:1:16:11:13:8
chr1	189115830	DEL00000255	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=189116102;PE=0;MAPQ=0;CT=3to5;CIPOS=-6,6;CIEND=-6,6;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=20;SRQ=0.991071;CONSENSUS=CATAACTATATTTTCTCATACTTACCTATAATTATCTTTACTGGCATTCTCTGCTTGTGTGTATTCTAATTACTTTATACTGTTGTTTGCTTCTAGCCTAAAGAACTTTCTTTACCACTTCTTCTAACATTGCATTCTTGAGTGTTTCTTTATGTGGTAATGTCCTTATTTCAGTTTAATTTTTGAAAGATAATTTTTCCGGACATAAAATTCAACATTGAGCA;CE=1.82502;RDRATIO=0.721129	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-2.51794,-63.1975:25:PASS:3955:7245:4432:2:0:0:19:1	0/1:-49.1768,0,-20.7777:10000:PASS:4304:2367:4505:1:0:0:8:16	0/1:-46.4744,0,-32.0749:10000:PASS:3834:3889:2409:1:0:0:11:15
chr1	189274836	DEL00000256	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=189277763;PE=23;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=1;CONSENSUS=ACTAAAGCATGAATTTAATAAATCCAGAAATAATAGTAATGAAATTATTCTTTACCTTTAATATTATCTTTATTTATAAAGTTATTATATGCAATATATATATTTACAGTACACCAATAATATTCATATAATTAGGTTTAAAAATTGTGTTTTTCTAATTCGTAGGATGCAAATAAACATTAGTCCTTCTGTTACTGGACTAATGTGTTACTGAATGAAATTAATTTTTTA;CE=1.73641;RDRATIO=0.52119	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-6.31897,-74.7973:63:PASS:190:374:155:2:19:0:21:0	0/1:-46.3671,0,-55.3659:10000:PASS:223:226:177:1:18:9:19:16	0/1:-71.5625,0,-42.6635:10000:PASS:198:162:169:1:11:14:15:23
chr1	189561064	DEL00000257	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=189561633;PE=2;MAPQ=60;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=1;CONSENSUS=TTCACTTCTCAGAATCAACATAAATGCCCATCAATATTAGATTGAGTAAAGAAAATGTGGTACATTGTGCACTATGAAATATTTTGCAGCCATAACAAAGAATTAGGTCTTTAAATAATTAATTTGCACTGATATATTACTATTATCACACCTAAATATTTAATCTTTTATAAAGGTATTATTTTTACATAGGCTATACAATTTTAAGTTAGTCA;CE=1.81875;RDRATIO=0.511689	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-6.92115,-82.9975:69:PASS:27:78:32:3:29:0:23:0	0/1:-20.7794,0,-42.5788:10000:PASS:35:41:29:1:17:0:14:8	0/1:-46.0676,0,-52.8675:10000:PASS:36:46:32:1:20:3:18:16
chr1	189884210	DEL00000258	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=189884989;PE=9;MAPQ=60;CT=3to5;CIPOS=-1,1;CIEND=-1,1;SRMAPQ=60;INSLEN=0;HOMLEN=0;SR=11;SRQ=1;CONSENSUS=ATTTTATTTTTATGTTATTTTTCTCACATTTTCAGTTCTAGTTTTTATGTCTTTAAACATCATTAAAGCCTTTTTTCTGCTATTTCAATTATCACAATTAAGAAGCTATCAACAGAGAAAACAGAAAACCTACAGAATGAGAGAAAATATTTGCAAATTATGCATCTGACAAAGGTTTCATATTCAGAATCTA;CE=1.81925;RDRATIO=0.425926	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-8.42535,-99.7965:84:PASS:62:98:47:2:29:0:28:0	0/1:-48.7646,0,-59.7643:10000:PASS:54:57:54:1:21:10:20:17	0/0:0,-11.1326,-130.794:111:PASS:47:114:45:2:31:0:37:0
chr1	192640668	DEL00000260	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=192640735;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=20;SRQ=0.995798;CONSENSUS=TTTGCTTAAGTATTGTGAATCTCTATTTGCAATCGGAAGAGTCCTAATAAGTGAATTAATCTATTCCCCTTCCATTTTCTTCCTTCCTATAGATATAAATAACTTTATTGCTTCTTGGTCTTATCTCCAAACCTGCAAATGAACTTGAATCTATACCTATATTTTCACTAGTTACAAGAGAATAGTAACTATTTCCTGTATTTTCACTTCTCCAATATCTTAACTCCTACATTCTGAA;CE=1.8534;RDRATIO=0.653398	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-39.8693,0,-54.6693:10000:PASS:1286:1413:930:1:0:0:18:14	0/0:0,-10.8327,-128.696:108:PASS:1564:2953:1462:2:0:0:36:0	0/1:-57.4666,0,-44.0674:10000:PASS:911:1416:1326:1:0:0:15:19
chr1	194090949	DEL00000262	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=194091113;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=6;SRQ=1;CONSENSUS=GTCTGTACCAAAAATACATAAATTAGCCGGGCATCGTGGTGGGCACCTGCAATTCCAGCTACTTCCTATTATCTGAAAGCGGTTTTGTAAAGTTGGAATTTTTTTTTTTCCCTTAATGTTTGGTAACTCACCAGAGAAAACATTTTGGCCTGAG;CE=1.96244;RDRATIO=0.413108	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-26.3822,0,-28.5815:10000:PASS:1503:1707:2093:1:0:0:10:9	0/0:0,-9.02506,-104.994:90:PASS:2904:6066:2375:2:0:0:30:0	0/0:0,-6.31815,-73.2965:63:PASS:2243:3034:2099:1:0:0:21:0
chr1	194548477	DEL00000264	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=194548738;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=10;SRQ=1;CONSENSUS=AACTATAGTTAATAATATTATATTATATACTACAAATTTCCAAGAGGGTATTTTTCAAGTGCTTTTACCACACACACACACACACACACATATAGATAAAGAGAACATGTTGGATGGTGAGGTGTTGAAAAAATGGAATGAAGGAGTACTTAAAAGTGATAAGATAGAAAAGTTATTTAGCTTATTTAGATAATTTA;CE=1.83588;RDRATIO=0.516082	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-29.7738,0,-50.1743:10000:PASS:5263:5630:4243:1:0:0:16:11	0/0:0,-10.23,-119.595:102:PASS:5112:9669:5159:2:0:0:34:0	0/0:0,-9.02635,-105.895:90:PASS:4501:10605:4740:2:0:0:30:0
chr1	198492645	DEL00000269	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=198492753;PE=0;MAPQ=0;CT=3to5;CIPOS=-9,9;CIEND=-9,9;SRMAPQ=60;INSLEN=0;HOMLEN=8;SR=16;SRQ=1;CONSENSUS=AAATTTTGCCCAGGTTGCCAAATTTTTAATAACAAAACAATTGGAAGACAATTACTATTTAAAATGTGAGCAGTTATTACAATGTAAATATAGGTTTTCTATATTTACATTGTATATTTACATTGTATATTCTATATTTACATAATATATTCTATATTTACATTGCATAGACCTCTACTTATAAGAAATTTAATAATATCCAT;CE=1.75071;RDRATIO=0.56825	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-6.61767,-75.195:66:PASS:1776:3237:1736:2:0:0:22:0	0/1:-55.8705,0,-33.9711:10000:PASS:2242:2019:1524:1:0:0:12:18	0/0:0,-9.62872,-113.996:96:PASS:2212:4454:2509:2:0:0:32:0
chr1	199140919	DEL00000270	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=199144678;PE=16;MAPQ=60;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=8;SRQ=1;CONSENSUS=GCCAGGTGTAGTGGCACACATCTGTAGTACTAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACTCGGGAGGTGGAGGTTGCAGTGAGCAGAGTGCAGGAGACAAAGTTATTCTATGCAGAAGAATCTGCTTACACAAGGACACAAAGAA;CE=1.9525;RDRATIO=0.509139	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-8.72601,-103.296:87:PASS:226:455:232:2:39:0:29:0	0/1:-37.9758,0,-35.2766:10000:PASS:229:249:232:1:20:16:12:13	0/0:0,-10.2307,-121.496:102:PASS:233:488:227:2:41:0:34:0
chr1	201256557	DUP00000194	G	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=201257455;PE=4;MAPQ=41;CT=5to3;CIPOS=-239,239;CIEND=-239,239;RDRATIO=1.56596	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-9.19075,0,-25.0355:92:PASS:41:131:45:3:5:4:0:0	0/0:0,-2.10721,-42:21:PASS:52:107:58:2:7:0:0:0	0/1:-10.6881,0,-47.5378:107:PASS:60:145:53:3:10:6:0:0
chr1	203918556	DEL00000274	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=203920759;PE=20;MAPQ=60;CT=3to5;CIPOS=-158,158;CIEND=-158,158;RDRATIO=0.797601	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-8.12678,-134.299:81:PASS:145:184:121:1:27:0:0:0	0/1:-51.7768,0,-63.6743:10000:PASS:141:103:125:1:15:10:0:0	0/1:-51.2725,0,-74.0722:10000:PASS:139:128:93:1:17:10:0:0
chr1	203925194	DEL00000275	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=203926753;PE=16;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.66879	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-8.72986,-174:87:PASS:79:198:86:2:29:0:0:0	0/1:-26.8764,0,-87.1057:10000:PASS:72:126:85:2:16:7:0:0	0/1:-45.9773,0,-65.2791:10000:PASS:78:101:87:1:12:10:0:0
chr1	203966710	DEL00000276	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=203976315;PE=30;MAPQ=60;CT=3to5;CIPOS=-1,1;CIEND=-1,1;SRMAPQ=60;INSLEN=0;HOMLEN=0;SR=17;SRQ=0.979381;CONSENSUS=TCTACTAAAAATACAAAAAATTAGCTGAGTGTGGTGGCACGTGCCTATAGTCCCAGCTACTCGGGAGCCTGAGGCAGGGGAATTGCTTGAACCCAGGAGACAGAGGTTTAATAGATTTAATAACTGGATGGGGGCAAGTCCCTAAAGTTTTTCAACAAAGAGGCTTTCCATCTCGTGTGATGTCATGGCCTAG;CE=1.98429;RDRATIO=0.483036	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.02701,-106.696:90:PASS:578:1205:552:2:42:0:30:0	0/1:-50.4676,0,-49.7671:10000:PASS:646:605:566:1:18:20:17:17	0/1:-47.27,0,-44.2711:10000:PASS:549:563:544:1:19:11:15:16
chr1	207119002	INV00000125	A	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=207119851;PE=12;MAPQ=60;CT=5to5;CIPOS=-398,398;CIEND=-398,398;RDRATIO=0.632284	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	1/1:-36,-1.80618,0:18:PASS:62:9:45:0:0:6:0:0	0/0:0,-11.1381,-222:111:PASS:65:117:40:2:37:0:0:0	0/1:-29.6784,0,-83.6784:10000:PASS:43:62:45:1:15:6:0:0
chr1	207119018	DEL00000279	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=207119851;PE=11;MAPQ=60;CT=3to5;CIPOS=-183,183;CIEND=-183,183;RDRATIO=0.700714	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	1/1:-24,-1.20412,0:12:LowQual:57:9:44:0:0:4:0:0	0/0:0,-10.8371,-216:108:PASS:67:113:39:2:36:0:0:0	0/1:-35.3773,0,-83.3773:10000:PASS:40:62:43:1:15:7:0:0
chr1	209586217	DEL00000281	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=209587911;PE=37;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=20;SRQ=0.995392;CONSENSUS=CCTGGTAGGGGAAAGATCCTTCCTCTCCCCTTCTGGAAGCCAGAGTAGAGTGCCTAGCTGGGAAGGTTAATAGTAATGAGCGTCCAACCTGTACAAAAGAGGCACCTTTTAGAGATGATCCAACTGATAACCTCCCTCCCAAGGCCCATAGGCTTTTCTGAGTCATGCTCCCAAAGAATGGAAAATCCCGGAAGCAGAGACTATAAAGCAGTCTTA;CE=1.99084;RDRATIO=0.545794	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-8.12409,-95.2963:81:PASS:106:199:108:2:34:0:27:0	1/1:-78.3973,-3.82185,0:38:PASS:108:7:106:0:1:27:1:23	0/1:-34.9747,0,-42.6747:10000:PASS:93:101:106:1:18:10:14:12
chr1	209761663	DUP00000201	C	<DUP>	.	PASS	PRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=209762735;PE=30;MAPQ=60;CT=5to3;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=19;SRQ=0.968912;CONSENSUS=GAAGCCACCCAAACACCACCGTGGTAAGAGCAGAGCCTCCCTCACTCCACAGGGCCTGCAGAGAATCCTGAGACAGCTGCCCCAGCTCACTTAGTAACTAGCTGTTACTAAGAGAAAGGAAGCTTTCCTTTGAATATGGAAGGAACCTTATGGATTATCTATTCCAAACTCCTCACTACACAGACAGAAGACT;CE=1.96913;RDRATIO=1.52789	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-47.9604,0,-74.4602:10000:PASS:77:146:68:2:27:8:24:17	0/0:0,-9.92939,-118.095:99:PASS:75:127:85:2:43:0:33:0	0/1:-47.8572,0,-89.8544:10000:PASS:61:171:80:2:37:22:29:17
chr1	215021384	DEL00000289	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=215021438;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=20;SRQ=0.985646;CONSENSUS=AATCTTGGTCAATGTGATGGTTGATTTTAGGTGTCGGCTTGACTGGGTTAAGGGTTACCCAGATAGCTGGGAAAGCATTATGTCTGGACACATCTCTGAGGGTGTTTCCAGAAGGTGGGCAGGCACTTTTCTATTTGTTGAGGTCCTTGCTAGAACAAAAGGCAGAGGAAAGATGGATTTGCCCTCTCTTCTGGAGCTGGGACAACCA;CE=1.96884;RDRATIO=0.702882	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-8.12423,-96.2964:81:PASS:1004:1923:858:2:0:0:27:0	1/1:-174.493,-14.7436,0:147:PASS:911:20:553:0:0:0:0:49	0/1:-18.7804,0,-46.0781:10000:PASS:607:919:659:1:0:0:15:7
chr1	217096616	DEL00000291	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=217096682;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=20;SRQ=1;CONSENSUS=CAGAACCTGGATTTCCTCTTAGTAACTGCCCTATCATCCTCCAACAATCCTCAGGTAACGATCCTTAGAGCACTGGTGTTTACGAGTCGCCAAAGGGGTGGATTGACTGAACCCAATCATGACAGCCCACTGAGGTTAATCTCTCCTTTGTCTCTACTTCCATCCACAAACTGATATCATTGTATTTATGCTTTAATTATTATTAATATGACT;CE=1.95931;RDRATIO=0.56766	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-39.5747,0,-38.9745:10000:PASS:1097:1084:902:1:0:0:13:13	0/0:0,-12.0359,-142.895:120:PASS:1479:3353:1786:2:0:0:40:0	0/1:-70.6674,0,-25.8713:10000:PASS:866:1040:918:1:0:0:10:23
chr1	225574614	DEL00000300	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=225574932;PE=0;MAPQ=0;CT=3to5;CIPOS=-6,6;CIEND=-6,6;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=5;SRQ=1;CONSENSUS=TGAGATTCGCTTGAACCTGGGAGGCAGAGGTTGCCGTGAGCCAACAGTACGCCACTGCACTCCAGCCTGGGTGACAAAGTGAGACTCTGTCTCCAAAATATATAAAAAAAAAAAAAAAAGATTGTGCATTCAGATACGAATAATAAACATA;CE=1.9422;RDRATIO=0.55857	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	1/1:-73.597,-6.31858,0:63:PASS:4746:320:5615:0:0:0:0:21	0/0:0,-5.41343,-59.4949:54:PASS:5086:7577:5398:1:0:0:18:0	0/1:-20.5809,0,-39.9788:10000:PASS:5621:4267:4949:1:0:0:14:8
chr1	226424986	DEL00000305	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=226425195;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=0.995434;CONSENSUS=TTAGACAATCCCTCTGGTTGCATTGTGAGGAAAGCTGCAAGGCTGCAGGCAGAGAAAATTGGGAGCTGTTGGAGCCATCCTGGTGAGAGGTGATGGCGGCCTGGACCAGGACAGTGGCAATAGACTTTTTGGATAACAATGAATAACAGAGCTAACATTTTTTGCATGATGATGTGAGCCCTTCTAAGCACTGTACATGTATTAATTTCATTTATTACC;CE=1.97824;RDRATIO=0.483092	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-7.12975,-113.495:71:PASS:4005:7703:3757:2:0:0:33:1	0/1:-61.2789,0,-0.281114:5:LowQual:3131:341:3235:0:0:0:2:19	0/1:-30.6725,0,-55.2716:10000:PASS:3835:3937:4377:1:0:0:18:11
chr1	227264352	DEL00000307	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=227264644;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=15;SRQ=0.989418;CONSENSUS=ATTTTCTTATAGAAAGCAATTCCAAACATAATGAGCAGATGCTTGCTGGCTCTAATAAATAAGCTATATGCCTTGTCCTTCTCCCTATATCTGAGGATCATGCCCTAAGTTTTATCAGTTTTAAAAATTTTTTAATTTCAAGGTAAGAGGCTTTAACATGAGAAATAAAATATATGCCAGTCCATTATG;CE=1.90031;RDRATIO=0.615312	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-44.5718,0,-41.3721:10000:PASS:4852:6015:4967:1:0:0:14:15	0/0:0,-7.82336,-92.3966:78:PASS:5144:10346:5248:2:0:0:26:0	0/1:-35.5756,0,-39.5756:10000:PASS:4287:4041:3930:1:0:0:13:12
chr1	227749750	DEL00000308	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=227749820;PE=0;MAPQ=0;CT=3to5;CIPOS=-12,12;CIEND=-12,12;SRMAPQ=60;INSLEN=0;HOMLEN=12;SR=8;SRQ=1;CONSENSUS=AGTGTGTGTTGAGTTTGCCGTCCTTCTCTATTGCTCTCTACCCCTTTTTTAAGGACACGTCCTTGAGAGCCTGTGTGTGTGTCTGTGTGTGTCATCTGTGTGTGTGTGTTTCAGTACACATAGCTCAGGTTTTTACATGCTTTCAATTACTTTTATTATTTCTTGAAAAGTCATTTTGAAGCGTGTTGTTT;CE=1.8707;RDRATIO=0.787346	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-38.6713,0,-51.1703:10000:PASS:1160:1763:945:2:0:0:17:13	0/0:0,-10.8318,-126.595:108:PASS:1640:3438:1592:2:0:0:36:0	0/0:0,-10.5321,-125.996:105:PASS:1622:3287:1482:2:0:0:35:0
chr1	229237641	DEL00000310	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=229238016;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=8;SRQ=0.989305;CONSENSUS=ACCTTTCAAAGAGTAATAAAACCTGGATCCATTCACTTTGGTTTTGAATGGCCAAAACAATCCAGGGATTGTTAAGTGCTGTGACTTAAGAAAGCATCCATTCTGAAATGCTGTAAAAAAAAAAAAAAAAAGTATTTAATGGCATGAAAAATGTTCACAACCCATTGTTTAATGAAGAACAAATT;CE=1.8776;RDRATIO=0.736956	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-25.475,0,-58.5711:10000:PASS:5846:9313:7134:1:0:0:20:10	0/0:0,-8.12189,-92.7941:81:PASS:6088:13084:7351:2:0:0:27:0	0/0:0,-9.02325,-102.592:90:PASS:6433:14614:8908:2:0:0:30:0
chr1	229676786	DEL00000311	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=229685090;PE=34;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=20;SRQ=0.99495;CONSENSUS=AAAGTTGGTACAGGTTCACATTTTTCTTCAGTGAACTTTTTCTGGTTTCTGTAATTAGTCCTATTAAGACGTCAGCCCATTGTATTTAGTAGAGATGGGGTTTCACCATATTGGCCAGAATAGTCTTGATCCCTTGACCTTGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGAGATTACAGGTGTGAACCTCACCT;CE=1.96847;RDRATIO=0.578085	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-6.01755,-70.2969:60:PASS:534:996:511:2:19:0:20:0	1/1:-87.7964,-7.52216,0:75:PASS:531:21:524:0:0:24:0:25	0/1:-23.9735,0,-59.2722:10000:PASS:454:535:517:1:21:11:19:9
chr1	229996842	DEL00000312	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=229998132;PE=7;MAPQ=60;CT=3to5;CIPOS=-224,224;CIEND=-224,224;RDRATIO=0.513893	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-35.0794,0,-71.9794:10000:PASS:69:84:64:1:13:7:0:0	0/0:0,-10.235,-204:102:PASS:91:164:82:2:34:0:0:0	0/0:0,-7.82677,-156:78:PASS:63:161:68:2:26:0:0:0
chr1	232322844	DEL00000314	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=232324506;PE=12;MAPQ=60;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=16;SRQ=1;CONSENSUS=AAAACCTGGCCACATTCAGAAGAGAAAGCATACATACATTTCCACTCACATGATAGGCCTGTTTATGGTCTGTATGTATTGAAAGAGTAAGAACAATAAATACCTAAGGCTCTAAAGAACAAAACTAGGAGCAGATTTATTTTCCATATGAATACAAACTTTTCAACAAAACAAGAAAAAGCATCCTAAATATTGAACACGGTT;CE=1.88604;RDRATIO=0.406526	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-50.6697,0,-41.0705:10000:PASS:105:83:101:1:17:12:14:17	0/0:0,-6.31815,-74.2965:63:PASS:135:228:102:2:30:0:21:0	0/0:0,-5.82862,-104.897:58:PASS:133:223:92:2:40:0:30:1
chr1	232700829	DEL00000315	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=232701014;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=53;INSLEN=0;HOMLEN=3;SR=12;SRQ=1;CONSENSUS=AAAAACATCGACAGGGTTATTATCTCCATTTTACAGATGACGAAACACAGTCCTTATGAAGTTGACTGGCCAGGCATGGTGGCTCAGCTCAGGAGGCGGAGGTTGCCGTGAACAGAGATCACACCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAA;CE=1.95202;RDRATIO=0.790866	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-10.1859,0,-34.7849:102:PASS:2457:2676:1026:2:0:0:11:4	0/0:0,-8.72546,-102.696:87:PASS:4102:6572:2663:2:0:0:29:0	0/1:-52.5712,0,-44.6676:10000:PASS:3671:3646:2632:1:0:0:16:17
chr1	235373798	DEL00000319	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=235375034;PE=9;MAPQ=60;CT=3to5;CIPOS=-148,148;CIEND=-148,148;RDRATIO=0.510716	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-41.3712,0,-92.1829:10000:PASS:55:72:74:1:18:10:0:0	0/0:0,-9.93388,-192.3:99:PASS:65:153:75:2:33:0:0:0	0/0:0,-7.82677,-155.9:78:PASS:80:120:74:2:26:0:0:0
chr1	236097102	DUP00000216	A	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=236097402;PE=5;MAPQ=22;CT=5to3;CIPOS=-523,523;CIEND=-523,523;RDRATIO=1.98406	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-2.87952,-92.504:29:PASS:6286:63757:5706:11:20:2:0:0	0/1:-4.6691,0,-121.079:47:PASS:5570:130538:6805:21:25:10:0:0	0/1:-2.27314,0,-63.7853:23:PASS:4859:100709:5258:20:14:7:0:0
chr1	237402807	INV00000135	A	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=237402912;PE=24;MAPQ=60;CT=3to3;CIPOS=-383,383;CIEND=-383,383;RDRATIO=0.86708	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-150.862,0,-48.8619:10000:PASS:1373:2668:1600:2:10:27:0:0	0/0:0,-10.536,-210:105:PASS:1392:4155:2290:2:35:0:0:0	0/1:-69.2701,0,-87.2701:10000:PASS:1100:2363:1315:2:16:13:0:0
chr1	238689007	DEL00000322	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=238689951;PE=6;MAPQ=60;CT=3to5;CIPOS=-15,15;CIEND=-15,15;SRMAPQ=60;INSLEN=0;HOMLEN=14;SR=11;SRQ=0.989474;CONSENSUS=AACTAATTTACATTCTTATATGTTATATTCCGCCGTTCTATCTGTTATATTTTATGTTCTGCCTATATATGCTTTTTATATTAAAAAAACTACTTTTACAAAACTGATACAGTTAGTGATCAAGTAAAATCAAATATAGCTCTGTGACACTGTCTTCCTCACAACTTTCTTTTCTCCTGAAAAATTTCAT;CE=1.81151;RDRATIO=0.299296	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-6.01776,-70.3972:60:PASS:64:56:55:1:24:0:20:0	0/1:-49.8795,0,-27.9739:10000:PASS:79:20:63:0:11:7:11:16	0/0:0,-6.61872,-75.6961:66:PASS:51:46:56:1:23:0:22:0
chr1	239959523	DEL00000325	T	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=239959958;PE=0;MAPQ=0;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=12;SRQ=0.994872;CONSENSUS=AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGCAGAAAGAAAGAATTAATTTCCATTCAGGGATTTTTTTCTTTAATATGAGTTGTATCTTCTTTCCTTCCTATCTGCCCTCCTTCCTTCATTTTTTCCTTCCTTCATCCTTCCTTCCCCTCCCTTTCTCC;CE=1.91037;RDRATIO=0.711551	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-8.12139,-91.3936:81:PASS:8875:18352:7434:2:0:0:27:0	0/1:-28.8736,0,-47.3909:10000:PASS:4110:9344:7560:2:0:0:16:12	0/1:-18.7771,0,-48.0816:10000:PASS:6783:9832:6904:1:0:0:16:9
chr1	240139270	DEL00000326	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=240139364;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=10;SRQ=1;CONSENSUS=TTGGTTGCTCATGTAAAGGTAAGGGAGTGGGCAGAGACAAGGAGAATGTCCAGGTTTCTGGTCTGAGCACTAGGGTAGATAGAGGGTGATGCAATTCACACAAAAAGGCCATTAGTTTTTTGTATCTGAGGTCAGGAGAGAGAGCCTAGGAGAAGAGAGATTGACGACTCTTCAGTGTGTAGATGATACTTGAAGCCATTATGCTCTG;CE=1.94317;RDRATIO=0.564316	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.0273,-107.696:90:PASS:2005:3731:1844:2:0:0:30:0	0/1:-36.0701,0,-55.3702:10000:PASS:1891:2171:1687:1:0:0:18:13	0/0:0,-8.12419,-95.6964:81:PASS:1485:3545:1812:2:0:0:27:0
chr1	241465747	DEL00000329	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=241465799;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=7;SRQ=0.993865;CONSENSUS=TTCTTTTCTTTCCTTAAGTCGAAGACTTTCACTTTTTCACTTAATGGAAGCAACGTATGGCTTCTCTTTGGCATGTCCTGATTGTCAGCATCAAATCACTACAATAAGGTGAAATCAGTCTGACAACCCGGACAACGATGAAGTGACTAATGGACAGGTAACA;CE=1.96834;RDRATIO=0.754135	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-35.4676,0,-64.5669:10000:PASS:863:1257:847:1:0:0:21:13	0/0:0,-9.62882,-113.596:96:PASS:1017:2084:1121:2:0:0:32:0	0/0:0,-7.22169,-85.197:72:PASS:855:1535:880:2:0:0:24:0
chr1	242956483	INV00000141	C	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=245126035;PE=6;MAPQ=60;CT=5to5;CIPOS=-385,385;CIEND=-385,385;RDRATIO=0.997322	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-7.52219,-139.196:75:PASS:131324:260267:131938:2:25:0:0:0	0/1:-20.5303,0,-124.33:10000:PASS:141987:280259:142096:2:26:8:0:0	0/0:0,-9.63275,-179:96:PASS:131161:260378:132063:2:32:0:0:0
chr1	242964496	DEL00000330	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=242965914;PE=9;MAPQ=33;CT=3to5;CIPOS=-354,354;CIEND=-354,354;RDRATIO=0.580755	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-7.73498,-192.401:77:PASS:72:187:95:2:33:1:0:0	0/1:-16.8702,0,-97.7319:10000:PASS:72:106:91:1:18:11:0:0	0/0:0,-1.42674,-110.166:14:LowQual:82:89:84:1:20:6:0:0
chr1	245443435	DUP00000219	G	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=245444092;PE=3;MAPQ=36;CT=5to3;CIPOS=-142,142;CIEND=-142,142;RDRATIO=2.2963	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-5.98876,0,-48.2878:60:PASS:31:66:35:2:10:2:0:0	0/0:0,-4.21435,-80.3999:42:PASS:35:27:27:1:14:0:0:0	0/1:-2.21452,0,-30.7068:22:PASS:32:60:42:2:10:3:0:0
chr1	245976727	DUP00000220	C	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=245977072;PE=3;MAPQ=40;CT=5to3;CIPOS=-474,474;CIEND=-474,474;RDRATIO=1.65152	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-0.902568,-12.6995:10:LowQual:125:2221:5614:1:3:0:0:0	0/1:-7.79186,0,-59.1881:78:PASS:472:9598:6919:3:14:4:0:0	0/0:0,-3.13748,-56.0262:31:PASS:494:5641:6680:2:11:0:0:0
chr1	246003980	DEL00000333	A	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=246004078;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=17;SRQ=0.990099;CONSENSUS=GATTTATTACACAAGTGATTATCCTAGAGATACTGGGACCCACGACATGGGGCTCCACCAATGTTCCTCTGTTATATAAGGTCAGGTATGAGTTCTGGGAAGCCACAGTAAAATGGGAATGAGCCTACCGACTTCATAGGATTGCTGTGAGGATTAAATGGAAATCGGTACGCAAAATGGCCAGCACAGTGCTAACATCTAG;CE=1.98285;RDRATIO=0.535676	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-46.5669,0,-54.8671:10000:PASS:2065:1969:1408:1:0:0:18:16	0/1:-42.3773,0,-25.5791:10000:PASS:890:1062:1111:1:0:0:9:14	0/0:0,-9.62697,-114.694:96:PASS:1850:4152:2073:2:0:0:32:0
chr1	246072090	DUP00000222	G	<DUP>	.	LowQual	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=246072360;PE=2;MAPQ=54;CT=5to3;CIPOS=-565,565;CIEND=-565,565;RDRATIO=1.77934	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-4.51842,-99.8272:45:PASS:1550:13854:5755:4:18:1:0:0	0/0:0,-3.50723,-49.1949:35:PASS:2037:16114:4572:5:12:0:0:0	0/1:-2.73943,0,-80.2296:27:PASS:2259:30503:4772:9:17:5:0:0
chr1	246519959	DEL00000334	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=246522000;PE=8;MAPQ=60;CT=3to5;CIPOS=-101,101;CIEND=-101,101;RDRATIO=0.597264	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-6.92356,-131.1:69:PASS:161:199:132:1:23:0:0:0	0/1:-49.2754,0,-53.822:10000:PASS:142:107:117:1:11:13:0:0	0/0:0,-4.82059,-112.828:48:PASS:129:175:124:1:19:1:0:0
chr1	247991213	DEL00000340	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=247992292;PE=12;MAPQ=60;CT=3to5;CIPOS=-193,193;CIEND=-193,193;RDRATIO=0.416119	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-9.03089,-180:90:PASS:59:159:57:3:30:0:0:0	0/1:-25.0691,0,-123.086:10000:PASS:64:61:69:1:22:8:0:0	0/1:-28.1732,0,-112.173:10000:PASS:68:77:67:1:20:6:0:0
chr1	248164315	DEL00000341	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=248165030;PE=5;MAPQ=60;CT=3to5;CIPOS=-198,198;CIEND=-198,198;RDRATIO=0.751467	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-1.80618,-36:18:PASS:50:61:29:2:6:0:0:0	0/1:-3.89279,0,-33.8928:39:PASS:45:33:45:1:6:1:0:0	0/1:-26.3876,0,-38.3876:10000:PASS:49:47:32:1:7:5:0:0
chr1	248383139	DEL00000342	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=248384597;PE=14;MAPQ=60;CT=3to5;CIPOS=-61,61;CIEND=-61,61;RDRATIO=0.70412	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:0,-5.5674,-80.7478:56:PASS:86:132:90:2:19:0:0:0	0/1:-25.8123,0,-28.2856:10000:PASS:85:53:83:1:9:5:0:0	0/1:-42.6716,0,-92.1681:10000:PASS:92:94:86:1:22:9:0:0
chr1	248938209	DUP00000229	T	<DUP>	.	PASS	IMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=248938524;PE=4;MAPQ=40;CT=5to3;CIPOS=-474,474;CIEND=-474,474;RDRATIO=1.25702	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-9.69271,0,-18.9188:97:PASS:2625:11697:1166:6:6:4:0:0	0/0:0,-1.24498,-44.3299:12:LowQual:3801:15189:2387:5:14:1:0:0	0/0:0,-3.21606,-31.8047:32:PASS:2871:10420:1514:5:11:0:0:0


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FILE: tests/AnnotSV/test_24_HtzCompound/input/3samples.snvindel.vcf
================================================
##fileformat=VCFv4.2
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	prob	father	mother
chr1	927744	.	G	T	3950.90	PASS	AC=6;AF=1.00;AN=6;DP=123;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.12;SOR=0.885;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,46:46:99:.:.:1480,138,0:109	1|1:0,40:40:99:.:.:1304,120,0:109	1|1:0,37:37:99:1|1:927744_G_T:1193,110,0:109
chr1	928622	.	G	C	2008.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=-2.044e+00;ClippingRankSum=0.00;DP=123;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=16.33;ReadPosRankSum=0.494;SOR=0.696;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:2,30:32:47:777,47,0:47	1|0:17,23:40:99:549,0,420:47	1|0:22,29:51:99:714,0,567:47
chr1	929346	.	T	A	3757.90	PASS	AC=6;AF=1.00;AN=6;BaseQRankSum=-3.210e-01;ClippingRankSum=0.00;DP=116;ExcessHet=3.0103;FS=3.402;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=32.40;ReadPosRankSum=-5.060e-01;SOR=0.535;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,41:41:99:1355,123,0:72	1|1:1,35:36:73:1117,73,0:72	1|1:0,39:39:99:1312,117,0:72
chr1	929375	.	A	G	4310.90	PASS	AC=6;AF=1.00;AN=6;BaseQRankSum=-1.113e+00;ClippingRankSum=0.00;DP=100;ExcessHet=3.0103;FS=3.872;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.52;ReadPosRankSum=-7.180e-01;SOR=0.872;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,33:33:99:1|1:929375_A_G:1459,99,0:45	1|1:1,33:34:45:1|1:929375_A_G:1386,45,0:45	1|1:0,33:33:99:1|1:929375_A_G:1492,102,0:45
chr1	929377	.	G	A	4310.90	PASS	AC=6;AF=1.00;AN=6;BaseQRankSum=-1.270e-01;ClippingRankSum=0.00;DP=100;ExcessHet=3.0103;FS=3.872;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.10;ReadPosRankSum=-7.150e-01;SOR=0.872;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,33:33:99:1|1:929375_A_G:1459,99,0:45	1|1:1,32:33:45:1|1:929375_A_G:1386,45,0:45	1|1:0,34:34:99:1|1:929375_A_G:1492,102,0:45
chr1	929558	.	G	A	1031.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.49;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=4.432;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.39;ReadPosRankSum=0.699;SOR=1.218;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:28,0:28:81:0,81,1215:81	0|1:14,14:28:99:386,0,331:81	0|1:23,26:49:99:677,0,481:81
chr1	929839	.	G	A	1482.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=1.32;ClippingRankSum=0.00;DP=80;ExcessHet=3.9794;FS=0.898;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=18.53;ReadPosRankSum=-9.860e-01;SOR=0.527;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,26:26:77:1|1:929839_G_A:873,77,0:77	1|0:13,8:21:99:.:.:190,0,370:77	1|0:15,18:33:99:.:.:451,0,362:77
chr1	930939	.	G	A	3741.90	PASS	AC=6;AF=1.00;AN=6;DP=118;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.71;SOR=0.798;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,43:43:99:1382,129,0:95	1|1:0,43:43:99:1345,129,0:95	1|1:0,32:32:96:1041,96,0:95
chr1	931131	.	C	CCCCT	499.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.054;ClippingRankSum=0.00;DP=59;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=16.64;ReadPosRankSum=-1.030e-01;SOR=0.576;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:29,0:29:51:0,51,765:51	0|1:7,7:14:99:273,0,297:51	0|1:9,7:16:99:267,0,373:51
chr1	931513	.	T	C	1145.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.64;ClippingRankSum=0.00;DP=112;ExcessHet=3.9794;FS=0.883;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=15.48;ReadPosRankSum=-5.200e-02;SOR=0.565;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:38,0:38:99:0,100,1175:99	0|1:15,17:32:99:476,0,354:99	0|1:16,26:42:99:701,0,430:99
chr1	932204	.	A	T	1074.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.76;ClippingRankSum=0.00;DP=126;ExcessHet=3.9794;FS=0.815;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.21;ReadPosRankSum=-2.040e-01;SOR=0.556;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:38,0:38:99:0,102,1206:101	0|1:17,22:39:99:637,0,433:101	0|1:29,20:49:99:469,0,724:101
chr1	932613	.	GTTTC	G	1335.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.06;ClippingRankSum=0.00;DP=110;ExcessHet=3.9794;FS=4.398;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=18.04;ReadPosRankSum=0.190;SOR=0.997;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:36,0:36:99:0,99,1145:99	0|1:17,19:36:99:747,0,721:99	0|1:21,17:38:99:629,0,1001:99
chr1	932949	.	A	C	3814.90	PASS	AC=6;AF=1.00;AN=6;DP=120;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.79;SOR=0.871;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,48:48:99:1467,143,0:77	1|1:0,26:26:78:882,78,0:77	1|1:0,46:46:99:1492,137,0:77
chr1	932976	.	C	T	2246.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=2.74;ClippingRankSum=0.00;DP=118;ExcessHet=3.9794;FS=1.547;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.04;ReadPosRankSum=0.626;SOR=0.920;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,47:47:99:1503,141,0:127	1|0:18,7:25:99:168,0,440:127	1|0:24,22:46:99:607,0,600:127
chr1	933024	.	C	T	766.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-1.026e+00;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=2.124;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.56;ReadPosRankSum=0.784;SOR=1.034;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:42,0:42:99:0,108,1620:108	0|1:8,12:22:99:356,0,217:108	0|1:23,18:41:99:442,0,633:108
chr1	933411	.	C	T	999.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.415;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.07;ReadPosRankSum=0.599;SOR=0.607;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:37,0:37:99:0,100,1152:99	0|1:11,17:28:99:467,0,253:99	0|1:21,22:43:99:564,0,524:99
chr1	933511	.	A	G	4079.90	PASS	AC=6;AF=1.00;AN=6;DP=127;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.13;SOR=0.774;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,51:51:99:1623,153,0:107	1|1:0,40:40:99:1344,120,0:107	1|1:0,36:36:99:1139,108,0:107
chr1	933548	.	A	AG	615.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-1.074e+00;ClippingRankSum=0.00;DP=118;ExcessHet=3.9794;FS=15.502;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=7.69;ReadPosRankSum=0.165;SOR=0.983;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:38,0:38:99:0,99,1200:99	0|1:22,24:46:99:385,0,347:99	0|1:17,17:34:99:271,0,273:99
chr1	934601	.	C	T	942.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.43;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=12.166;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.24;ReadPosRankSum=-5.380e-01;SOR=2.012;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:32,0:32:93:0,93,1395:93	0|1:22,21:43:99:540,0,607:93	0|1:18,16:34:99:434,0,463:93
chr1	934758	.	T	TG	265.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-3.150e-01;ClippingRankSum=0.00;DP=114;ExcessHet=3.9794;FS=2.141;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=3.68;ReadPosRankSum=2.34;SOR=1.066;set=Intersection	GT:AD:DP:GQ:PL:TP	1|0:42,0:42:77:0,77,1181:76	0|1:23,14:37:99:181,0,371:76	0|1:24,11:35:99:125,0,395:76
chr1	935523	.	T	C	1002.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.520;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=3.200;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.92;ReadPosRankSum=0.446;SOR=0.967;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:37,0:37:99:0,105,1086:104	0|1:18,24:42:99:648,0,499:104	0|1:16,14:30:99:386,0,446:104
chr1	935954	.	G	T	807.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.63;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=6.287;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=11.21;ReadPosRankSum=-1.399e+00;SOR=0.497;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:36,0:36:99:0,99,1300:99	0|1:21,17:38:99:445,0,565:99	0|1:19,15:34:99:394,0,498:99
chr1	938178	.	G	T	1052.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.615;ClippingRankSum=0.00;DP=107;ExcessHet=3.9794;FS=0.877;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.41;ReadPosRankSum=1.81;SOR=0.816;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:34,0:34:99:0,99,1001:99	0|1:11,13:24:99:344,0,270:99	0|1:22,27:49:99:740,0,561:99
chr1	939779	.	AGCCAGTGGACGCCGACCT	A	1734.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.801;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=20.89;ReadPosRankSum=2.93;SOR=0.721;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:36,0:36:90:0,90,1112:90	0|1:27,20:47:99:758,0,3830:90	0|1:11,25:36:99:1017,0,1516:90
chr1	940262	.	C	CG	80.12	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=-1.645e+00;ClippingRankSum=0.00;DP=34;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=16.02;ReadPosRankSum=0.253;SOR=1.022;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:19,0:19:22:.:.:0,22,440:21	0|0:10,0:10:30:.:.:0,30,297:21	0|1:2,3:5:75:0|1:940256_C_T:120,0,75:21
chr1	940263	.	C	G,CG	186.16	PASS	AC=1,1;AF=0.167,0.167;AN=6;BaseQRankSum=1.07;ClippingRankSum=0.00;DP=31;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=15.51;ReadPosRankSum=0.484;SOR=0.293;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL	0/0:19,0,0:19:51:.:.:0,51,765,51,765,765	0/1:3,4,0:7:53:.:.:98,0,53,107,65,172	0/2:2,0,3:5:75:0|1:940256_C_T:120,126,210,0,84,75
chr1	940296	.	GCC	G	65.91	PASS	AC=1;AF=0.250;AN=4;BaseQRankSum=-5.240e-01;ClippingRankSum=0.00;DP=30;ExcessHet=3.0103;FS=0.000;MQ=47.86;MQ0=0;MQRankSum=0.00;QD=13.18;ReadPosRankSum=-5.240e-01;SOR=0.693;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:21,0:21:28:0,28,500:26	0|1:1,4:5:15:104,0,15:26	./.:4,0:4:.:0,0,0
chr1	940390	.	A	G	470.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.48;ClippingRankSum=0.00;DP=62;ExcessHet=3.9794;FS=4.039;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=12.37;ReadPosRankSum=0.047;SOR=0.202;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:24,0:24:47:0,47,734:47	0|1:14,6:20:99:149,0,372:47	0|1:6,12:18:99:353,0,154:47
chr1	940820	.	G	C	159.13	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=3.26;ClippingRankSum=0.00;DP=102;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=3.88;ReadPosRankSum=-1.373e+00;SOR=0.892;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:27,0:27:75:0,75,1125:74	0|0:34,0:34:99:0,99,1081:74	0|1:32,9:41:99:190,0,774:74
chr1	941119	.	A	G	533.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.057;ClippingRankSum=0.00;DP=87;ExcessHet=3.9794;FS=5.572;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.52;ReadPosRankSum=1.19;SOR=1.034;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:31,0:31:79:0,79,989:79	0|1:17,13:30:99:316,0,460:79	0|1:16,10:26:99:249,0,455:79
chr1	942335	.	C	G	869.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.406;ClippingRankSum=0.00;DP=86;ExcessHet=3.9794;FS=3.665;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.25;ReadPosRankSum=2.31;SOR=1.270;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:25,0:25:72:0,72,778:72	0|1:11,16:27:99:384,0,231:72	0|1:13,21:34:99:517,0,286:72
chr1	943526	.	CTTT	C	897.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.996;ClippingRankSum=0.00;DP=51;ExcessHet=3.9794;FS=1.505;MQ=68.61;MQ0=0;MQRankSum=0.00;QD=36.27;ReadPosRankSum=-3.860e-01;SOR=0.396;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:6,0:16:3:0,3,107:4	0|1:1,11:18:35:377,0,35:4	0|1:1,11:17:20:376,0,20:4
chr1	944296	.	G	A	1602.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.809;ClippingRankSum=0.00;DP=115;ExcessHet=3.9794;FS=0.864;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.54;ReadPosRankSum=0.593;SOR=0.858;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:33,0:33:90:.:.:0,90,1350:90	0|1:25,29:54:99:0|1:944296_G_A:1108,0,1292:90	0|1:9,19:28:99:.:.:526,0,178:90
chr1	944307	.	T	C	1562.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.73;ClippingRankSum=0.00;DP=114;ExcessHet=3.9794;FS=4.260;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.05;ReadPosRankSum=0.919;SOR=1.179;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:32,0:32:93:.:.:0,93,1395:93	0|1:26,30:56:99:0|1:944296_G_A:1118,0,1320:93	0|1:10,16:26:99:.:.:476,0,206:93
chr1	944858	.	A	G	1028.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-1.940e-01;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=0.834;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.69;ReadPosRankSum=-3.380e-01;SOR=0.752;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:38,0:38:99:0,103,1244:103	0|1:19,16:35:99:404,0,533:103	0|1:22,24:46:99:656,0,581:103
chr1	946247	.	G	A	971.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-4.490e-01;ClippingRankSum=0.00;DP=106;ExcessHet=3.9794;FS=3.239;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.68;ReadPosRankSum=0.606;SOR=0.465;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:35,0:35:56:0,56,958:56	0|1:18,19:37:99:466,0,513:56	0|1:14,20:34:99:537,0,364:56
chr1	947423	.	A	G	791.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.09;ClippingRankSum=0.00;DP=102;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.89;ReadPosRankSum=0.904;SOR=0.610;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:22,0:22:60:0,60,780:60	0|1:22,17:39:99:444,0,564:60	0|1:26,15:41:99:379,0,679:60
chr1	948245	.	A	G	3850.90	PASS	AC=6;AF=1.00;AN=6;DP=119;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.36;SOR=0.744;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,44:44:99:1439,132,0:109	1|1:0,38:38:99:1239,114,0:109	1|1:0,37:37:99:1199,111,0:109
chr1	948711	.	C	CACCCTGGTCCCCCTGGTCCCTTTGGCCCTGCACCTGGCTGG	2397.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-9.250e-01;ClippingRankSum=0.00;DP=128;ExcessHet=3.9794;FS=0.790;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=25.50;ReadPosRankSum=0.766;SOR=0.676;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:34,0:34:93:0,93,1395:93	0|1:29,32:61:99:1325,0,2656:93	0|1:9,24:33:99:1113,0,1340:93
chr1	949046	.	A	AACAGCAAAG	1440.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.834;ClippingRankSum=0.00;DP=102;ExcessHet=3.9794;FS=2.007;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=20.57;ReadPosRankSum=0.727;SOR=1.022;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:32,0:32:93:0,93,1395:93	0|1:18,17:35:99:642,0,1613:93	0|1:14,21:35:99:839,0,1204:93
chr1	949171	.	GAGAA	G	844.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.796;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=10.348;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=11.41;ReadPosRankSum=1.86;SOR=0.929;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:34,0:34:99:0,99,1152:99	0|1:30,11:41:99:372,0,1496:99	0|1:19,14:33:99:513,0,915:99
chr1	949387	.	G	A	387.13	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=-1.008e+00;ClippingRankSum=0.00;DP=103;ExcessHet=3.0103;FS=2.987;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.75;ReadPosRankSum=0.165;SOR=0.478;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:37,0:37:99:0,108,1296:89	0|0:30,0:30:90:0,90,852:89	0|1:19,17:36:99:418,0,523:89
chr1	949435	.	A	G	573.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-2.080e-01;ClippingRankSum=0.00;DP=111;ExcessHet=3.9794;FS=0.903;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=7.64;ReadPosRankSum=0.496;SOR=0.551;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:36,0:36:99:0,100,1201:99	0|1:26,13:39:99:273,0,676:99	0|1:21,15:36:99:332,0,566:99
chr1	950296	.	C	A	1942.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.283;ClippingRankSum=0.00;DP=118;ExcessHet=3.9794;FS=2.850;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=22.32;ReadPosRankSum=0.375;SOR=0.660;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:31,0:31:90:.:.:0,90,1350:90	0|1:14,18:32:99:0|1:950296_C_A:744,0,1138:90	0|1:24,31:55:99:0|1:950296_C_A:1230,0,2113:90
chr1	950309	.	G	A	1905.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.867;ClippingRankSum=0.00;DP=120;ExcessHet=3.9794;FS=1.784;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=22.68;ReadPosRankSum=0.548;SOR=0.504;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:36,0:36:90:.:.:0,90,1122:90	0|1:13,18:31:99:0|1:950296_C_A:715,0,1154:90	0|1:23,30:53:99:0|1:950296_C_A:1222,0,2084:90
chr1	950319	.	A	G	1872.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-2.672e+00;ClippingRankSum=0.00;DP=124;ExcessHet=3.9794;FS=1.770;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=21.77;ReadPosRankSum=0.798;SOR=0.498;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:38,0:38:65:.:.:0,65,1122:65	0|1:13,19:32:99:0|1:950296_C_A:737,0,1151:65	0|1:24,30:54:99:0|1:950296_C_A:1167,0,2072:65
chr1	950502	.	GAC	G	2163.12	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=0.132;ClippingRankSum=0.00;DP=125;ExcessHet=3.9794;FS=2.317;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=17.30;ReadPosRankSum=-1.146e+00;SOR=0.956;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,37:37:99:1276,111,0:110	1|0:26,15:41:99:386,0,764:110	1|0:27,20:47:99:542,0,783:110
chr1	950626	.	T	C	1468.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.43;ClippingRankSum=0.00;DP=136;ExcessHet=3.9794;FS=3.769;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=14.83;ReadPosRankSum=0.711;SOR=0.461;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:37,0:37:99:0,100,1181:99	0|1:20,28:48:99:789,0,499:99	0|1:26,25:51:99:711,0,723:99
chr1	950669	.	ACAG	A	1967.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.251;ClippingRankSum=0.00;DP=125;ExcessHet=3.9794;FS=2.876;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=22.35;ReadPosRankSum=-3.290e-01;SOR=0.694;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:37,0:37:99:0,100,1181:99	0|1:15,23:38:99:902,0,589:99	0|1:21,29:50:99:1106,0,837:99
chr1	950799	.	CA	C	2308.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.024;ClippingRankSum=0.00;DP=107;ExcessHet=3.9794;FS=0.886;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.48;ReadPosRankSum=0.735;SOR=0.515;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:23,0:23:60:.:.:0,60,900:60	0|1:13,26:39:99:0|1:950799_CA_C:1092,0,1156:60	0|1:15,30:45:99:0|1:950799_CA_C:1257,0,899:60
chr1	950802	.	TG	T	2305.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.748;ClippingRankSum=0.00;DP=110;ExcessHet=3.9794;FS=0.865;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=26.50;ReadPosRankSum=-1.507e+00;SOR=0.520;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:23,0:23:60:.:.:0,60,900:60	0|1:14,27:41:99:0|1:950799_CA_C:1089,0,1189:60	0|1:15,31:46:99:0|1:950799_CA_C:1257,0,899:60
chr1	950806	.	C	CAG	2305.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.686;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=26.80;ReadPosRankSum=-1.275e+00;SOR=0.669;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:23,0:23:60:.:.:0,60,900:60	0|1:14,26:40:99:0|1:950799_CA_C:1089,0,1189:60	0|1:15,31:46:99:0|1:950799_CA_C:1257,0,899:60
chr1	951408	.	G	A	840.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.815;ClippingRankSum=0.00;DP=101;ExcessHet=3.9794;FS=0.988;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.00;ReadPosRankSum=0.950;SOR=0.481;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:31,0:31:90:0,90,936:90	0|1:15,15:30:99:419,0,431:90	0|1:23,17:40:99:453,0,619:90
chr1	951437	.	C	T	741.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-1.346e+00;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=10.90;ReadPosRankSum=0.901;SOR=0.620;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:32,0:32:84:0,84,1038:84	0|1:15,16:31:99:428,0,428:84	0|1:23,14:37:99:345,0,671:84
chr1	952180	.	A	C	988.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.126;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=2.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.53;ReadPosRankSum=0.790;SOR=0.471;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:37,0:37:99:0,99,1485:99	0|1:13,24:37:99:682,0,330:99	0|1:18,13:31:99:338,0,502:99
chr1	952421	.	A	G	1135.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.643;ClippingRankSum=0.00;DP=103;ExcessHet=3.9794;FS=4.577;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=15.34;ReadPosRankSum=1.30;SOR=1.057;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:29,0:29:81:0,81,928:81	0|1:18,28:46:99:775,0,442:81	0|1:14,14:28:99:392,0,382:81
chr1	953259	.	T	C	1365.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.17;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=1.798;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=16.06;ReadPosRankSum=2.28;SOR=0.720;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:34,0:34:90:0,90,1350:90	0|1:21,23:44:99:596,0,511:90	0|1:13,28:41:99:801,0,303:90
chr1	953279	.	T	C	1268.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-4.640e-01;ClippingRankSum=0.00;DP=113;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=16.26;ReadPosRankSum=2.06;SOR=0.678;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:35,0:35:99:0,99,1196:99	0|1:17,23:40:99:639,0,450:99	0|1:14,24:38:99:661,0,323:99
chr1	953778	.	G	C	1367.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=4.28;ClippingRankSum=0.00;DP=95;ExcessHet=3.9794;FS=8.581;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=21.03;ReadPosRankSum=1.03;SOR=1.055;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:30,0:30:84:.:.:0,84,1260:84	0|1:18,21:39:99:0|1:953778_G_C:802,0,941:84	0|1:11,15:26:99:0|1:953778_G_C:597,0,590:84
chr1	953779	.	A	C	1367.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.894;ClippingRankSum=0.00;DP=95;ExcessHet=3.9794;FS=8.581;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=21.03;ReadPosRankSum=1.03;SOR=1.055;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:30,0:30:84:.:.:0,84,1260:84	0|1:18,21:39:99:0|1:953778_G_C:802,0,941:84	0|1:11,15:26:99:0|1:953778_G_C:597,0,590:84
chr1	954258	.	G	C	897.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.00;ClippingRankSum=0.00;DP=113;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.12;ReadPosRankSum=-2.680e-01;SOR=0.704;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:39,0:39:99:0,105,1320:104	0|1:13,20:33:99:550,0,333:104	0|1:26,15:41:99:379,0,721:104
chr1	954333	.	C	A	389.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.47;ClippingRankSum=0.00;DP=104;ExcessHet=3.9794;FS=5.297;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=5.56;ReadPosRankSum=0.087;SOR=0.861;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:34,0:34:67:0,67,891:67	0|1:23,10:33:99:239,0,544:67	0|1:28,9:37:99:182,0,710:67
chr1	955641	.	G	A	820.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.104;ClippingRankSum=0.00;DP=99;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.06;ReadPosRankSum=2.16;SOR=0.588;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:31,0:31:90:0,90,1350:90	0|1:18,16:34:99:374,0,487:90	0|1:16,18:34:99:478,0,423:90
chr1	955679	.	C	T	920.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-1.201e+00;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.94;ReadPosRankSum=0.109;SOR=0.654;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:34,0:34:99:0,102,941:101	0|1:14,15:29:99:369,0,371:101	0|1:15,22:37:99:583,0,381:101
chr1	956565	.	A	G	966.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-1.324e+00;ClippingRankSum=0.00;DP=99;ExcessHet=3.9794;FS=3.154;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.06;ReadPosRankSum=0.535;SOR=1.096;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:25,0:25:75:0,75,788:75	0|1:15,18:33:99:428,0,382:75	0|1:17,24:41:99:570,0,447:75
chr1	957365	.	G	A	902.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.16;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=3.288;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.07;ReadPosRankSum=0.811;SOR=0.372;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:36,0:36:73:0,73,1101:73	0|1:15,18:33:99:506,0,382:73	0|1:19,17:36:99:428,0,512:73
chr1	957814	.	G	C	423.13	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=2.75;ClippingRankSum=0.00;DP=113;ExcessHet=3.0103;FS=7.610;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=11.44;ReadPosRankSum=-2.830e-01;SOR=2.179;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:38,0:38:99:0,114,1090:98	0|1:20,17:37:99:454,0,459:98	0|0:38,0:38:99:0,99,1121:98
chr1	957900	.	G	A	1116.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.14;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=4.576;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=15.08;ReadPosRankSum=1.14;SOR=1.143;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:34,0:34:99:0,99,1046:99	0|1:11,20:31:99:557,0,229:99	0|1:20,23:43:99:591,0,451:99
chr1	958339	.	G	A	935.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=4.28;ClippingRankSum=0.00;DP=94;ExcessHet=3.9794;FS=2.280;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=15.59;ReadPosRankSum=-1.410e-01;SOR=1.150;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:34,0:34:99:0,99,1485:99	0|1:13,22:35:99:620,0,197:99	0|1:11,14:25:99:347,0,217:99
chr1	959193	.	G	A	903.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.03;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=3.367;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.48;ReadPosRankSum=1.71;SOR=0.356;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:33,0:33:99:0,99,1006:99	0|1:14,19:33:99:501,0,314:99	0|1:18,16:34:99:434,0,443:99
chr1	959510	.	A	AAGAC	1414.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.769;ClippingRankSum=0.00;DP=81;ExcessHet=3.9794;FS=2.296;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=24.38;ReadPosRankSum=0.162;SOR=0.807;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:23,0:23:55:0,55,730:55	0|1:12,19:31:99:761,0,507:55	0|1:10,17:27:99:694,0,443:55
chr1	960326	.	G	A	289.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.674;ClippingRankSum=0.00;DP=53;ExcessHet=3.9794;FS=11.090;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.05;ReadPosRankSum=-1.131e+00;SOR=0.042;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:29,0:29:81:0,81,1215:80	0|1:5,5:10:99:143,0,136:80	0|1:6,8:14:99:178,0,157:80
chr1	960375	.	A	AG	87.10	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.22;ClippingRankSum=0.00;DP=42;ExcessHet=5.4407;FS=2.207;MQ=59.14;MQ0=0;MQRankSum=0.00;QD=3.48;ReadPosRankSum=1.53;SOR=0.250;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:17,0:17:0:0,0,266:3	0|1:9,4:13:50:50,0,142:3	0|1:7,5:12:74:74,0,118:3
chr1	961096	.	A	G	285.09	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.026;ClippingRankSum=0.00;DP=47;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.18;ReadPosRankSum=-5.660e-01;SOR=0.693;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:19,0:19:8:0,8,461:8	0|1:9,4:13:69:69,0,213:8	0|1:5,10:15:99:247,0,119:8
chr1	961945	.	G	C	821.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.54;ClippingRankSum=0.00;DP=103;ExcessHet=3.9794;FS=8.014;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.80;ReadPosRankSum=2.11;SOR=0.222;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:27,0:27:75:0,75,1125:75	0|1:18,19:37:99:464,0,365:75	0|1:22,17:39:99:389,0,482:75
chr1	962184	.	T	C	695.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.268;ClippingRankSum=0.00;DP=88;ExcessHet=3.9794;FS=7.247;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=11.99;ReadPosRankSum=0.109;SOR=1.000;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:30,0:30:90:0,90,1013:90	0|1:14,15:29:99:391,0,389:90	0|1:16,13:29:99:336,0,438:90
chr1	962358	.	C	T	2304.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=-3.270e-01;ClippingRankSum=0.00;DP=121;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.04;ReadPosRankSum=0.873;SOR=0.700;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:1,34:35:71:1096,71,0:71	1|0:19,24:43:99:655,0,469:71	1|0:21,22:43:99:585,0,555:71
chr1	962943	.	T	C	941.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.64;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=2.038;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.05;ReadPosRankSum=0.381;SOR=0.481;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:33,0:33:90:0,90,1350:90	0|1:12,20:32:99:542,0,276:90	0|1:19,16:35:99:431,0,485:90
chr1	964228	.	C	T	1838.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=-1.560e-01;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=15.45;ReadPosRankSum=-9.330e-01;SOR=0.702;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,35:35:99:.:.:1136,105,0:104	1|0:24,8:32:99:.:.:162,0,718:104	1|0:29,23:52:99:0|1:964228_C_T:572,0,810:104
chr1	964548	.	G	C	1078.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-5.950e-01;ClippingRankSum=0.00;DP=78;ExcessHet=3.9794;FS=5.110;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=25.07;ReadPosRankSum=0.498;SOR=0.193;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:35,0:35:80:.:.:0,80,1027:80	0|1:4,10:14:99:0|1:964548_G_C:388,0,464:80	0|1:11,18:29:99:0|1:964548_G_C:722,0,1691:80
chr1	964557	.	G	T	1078.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.949;ClippingRankSum=0.00;DP=77;ExcessHet=3.9794;FS=5.147;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=25.67;ReadPosRankSum=1.29;SOR=0.174;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:35,0:35:70:.:.:0,70,995:70	0|1:4,9:13:99:0|1:964548_G_C:388,0,464:70	0|1:11,18:29:99:0|1:964548_G_C:722,0,1691:70
chr1	964558	.	G	C	1056.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.77;ClippingRankSum=0.00;DP=76;ExcessHet=3.9794;FS=5.147;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=25.15;ReadPosRankSum=1.29;SOR=0.174;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:34,0:34:87:.:.:0,87,1305:87	0|1:4,9:13:99:0|1:964548_G_C:366,0,467:87	0|1:11,18:29:99:0|1:964548_G_C:722,0,1691:87
chr1	964562	.	G	A	966.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.24;ClippingRankSum=0.00;DP=70;ExcessHet=3.9794;FS=5.172;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=24.77;ReadPosRankSum=1.45;SOR=0.211;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:31,0:31:84:.:.:0,84,1260:84	0|1:4,9:13:99:0|1:964548_G_C:366,0,467:84	0|1:10,16:26:99:0|1:964548_G_C:632,0,1893:84
chr1	964905	.	C	T	1160.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-3.240e-01;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=18.42;ReadPosRankSum=0.500;SOR=0.646;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:37,0:37:99:.:.:0,99,1155:99	0|1:22,15:37:99:0|1:964905_C_T:550,0,1233:99	0|1:10,16:26:99:0|1:964905_C_T:642,0,574:99
chr1	964906	.	A	G	1160.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.137;ClippingRankSum=0.00;DP=101;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=18.13;ReadPosRankSum=0.500;SOR=0.602;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:37,0:37:99:.:.:0,99,1155:99	0|1:23,15:38:99:0|1:964905_C_T:550,0,1233:99	0|1:10,16:26:99:0|1:964905_C_T:642,0,574:99
chr1	964918	.	C	G	288.13	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=-2.085e+00;ClippingRankSum=0.00;DP=103;ExcessHet=3.0103;FS=6.276;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=10.67;ReadPosRankSum=-1.008e+00;SOR=0.141;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:37,0:37:99:.:.:0,99,1155:98	0|0:39,0:39:99:.:.:0,108,1185:98	0|1:12,15:27:99:0|1:964905_C_T:319,0,945:98
chr1	965337	.	CTTAT	C	1486.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-2.170e-01;ClippingRankSum=0.00;DP=120;ExcessHet=3.9794;FS=1.800;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=17.91;ReadPosRankSum=1.42;SOR=0.968;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:37,0:37:99:.:.:0,99,1152:99	0|1:14,18:32:99:.:.:704,0,764:99	0|1:30,21:51:99:0|1:965337_CTTAT_C:823,0,1322:99
chr1	965350	.	G	A	1588.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.330;ClippingRankSum=0.00;DP=135;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=18.47;ReadPosRankSum=0.762;SOR=0.788;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:49,0:49:98:.:.:0,98,1505:97	0|1:16,19:35:99:.:.:740,0,392:97	0|1:27,24:51:99:0|1:965337_CTTAT_C:880,0,1296:97
chr1	965592	.	T	G	1045.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.771;ClippingRankSum=0.00;DP=128;ExcessHet=3.9794;FS=8.959;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.15;ReadPosRankSum=-1.460e-01;SOR=1.598;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:42,0:42:57:0,57,1261:57	0|1:19,15:34:99:387,0,498:57	0|1:26,26:52:99:690,0,682:57
chr1	965643	.	T	C	770.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-2.182e+00;ClippingRankSum=0.00;DP=124;ExcessHet=3.9794;FS=13.515;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.63;ReadPosRankSum=1.13;SOR=1.611;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:44,0:44:97:0,97,1380:97	0|1:18,16:34:99:315,0,424:97	0|1:24,22:46:99:487,0,649:97
chr1	966179	.	G	A	665.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=3.12;ClippingRankSum=0.00;DP=90;ExcessHet=3.9794;FS=0.943;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.08;ReadPosRankSum=-8.540e-01;SOR=0.504;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:24,0:24:63:0,63,945:63	0|1:15,15:30:99:325,0,342:63	0|1:21,15:36:99:372,0,457:63
chr1	966227	.	C	G	702.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.616;ClippingRankSum=0.00;DP=93;ExcessHet=3.9794;FS=3.131;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.62;ReadPosRankSum=-9.860e-01;SOR=0.407;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:20,0:20:57:0,57,855:57	0|1:18,16:34:99:328,0,372:57	0|1:21,18:39:99:406,0,481:57
chr1	966272	.	A	G	3574.90	PASS	AC=6;AF=1.00;AN=6;DP=109;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.80;SOR=0.912;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,24:24:72:833,72,0:122	1|1:0,41:41:99:1333,123,0:122	1|1:0,44:44:99:1435,132,0:122
chr1	967384	.	C	G	945.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-1.755e+00;ClippingRankSum=0.00;DP=86;ExcessHet=3.9794;FS=14.256;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=15.75;ReadPosRankSum=1.77;SOR=0.315;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:26,0:26:66:.:.:0,66,990:66	0|1:16,17:33:99:0|1:967376_AC_A:550,0,575:66	0|1:8,19:27:99:.:.:427,0,302:66
chr1	967617	.	G	A	1005.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-2.050e-01;ClippingRankSum=0.00;DP=110;ExcessHet=3.9794;FS=16.125;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.23;ReadPosRankSum=0.573;SOR=1.013;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:34,0:34:99:0,99,1485:99	0|1:15,20:35:99:540,0,371:99	0|1:22,19:41:99:497,0,601:99
chr1	967865	.	A	G	817.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-1.660e-01;ClippingRankSum=0.00;DP=111;ExcessHet=3.9794;FS=1.900;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.90;ReadPosRankSum=0.998;SOR=0.793;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:36,0:36:99:0,99,1206:99	0|1:22,15:37:99:370,0,576:99	0|1:18,20:38:99:479,0,485:99
chr1	967941	.	G	A	982.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=4.07;ClippingRankSum=0.00;DP=115;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.43;ReadPosRankSum=1.02;SOR=0.661;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:36,0:36:99:0,99,1206:99	0|1:22,20:42:99:549,0,478:99	0|1:19,18:37:99:465,0,419:99
chr1	969377	.	A	ATG	494.09	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=0.768;ClippingRankSum=0.00;DP=117;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=11.76;ReadPosRankSum=0.126;SOR=0.709;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:35,0:35:99:0,102,1167:99	0|1:22,20:42:99:534,0,576:99	0|0:40,0:40:99:0,103,1125:99
chr1	969750	.	ATG	A	418.09	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=-1.040e+00;ClippingRankSum=0.00;DP=122;ExcessHet=3.0103;FS=3.256;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=13.49;ReadPosRankSum=-1.040e-01;SOR=1.426;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:52,0:52:99:0,110,1588:81	0|1:15,16:31:99:458,0,416:81	0|0:39,0:39:82:0,82,1189:81
chr1	969780	.	C	T	1010.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=3.69;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=11.247;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=15.08;ReadPosRankSum=0.996;SOR=0.136;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:52,0:52:99:.:.:0,110,1588:109	0|1:13,14:27:99:.:.:345,0,278:109	0|1:14,26:40:99:0|1:969780_C_T:697,0,237:109
chr1	971790	.	AG	A	340.09	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=-2.519e+00;ClippingRankSum=0.00;DP=91;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.45;ReadPosRankSum=2.52;SOR=0.703;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:24,0:24:72:0,72,813:71	0|0:31,0:31:81:0,81,983:71	0|1:17,19:36:99:380,0,328:71
chr1	972790	.	C	G	1509.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=1.62;ClippingRankSum=0.00;DP=75;ExcessHet=3.9794;FS=11.268;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=20.12;ReadPosRankSum=-4.230e-01;SOR=2.470;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,35:35:99:1170,105,0:104	1|0:12,7:19:99:166,0,330:104	1|0:13,8:21:99:205,0,314:104
chr1	973034	.	C	T	2235.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=2.50;ClippingRankSum=0.00;DP=113;ExcessHet=3.9794;FS=1.705;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.78;ReadPosRankSum=1.15;SOR=0.485;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,48:48:99:1483,143,0:127	1|0:13,18:31:99:409,0,225:127	1|0:19,15:34:99:375,0,422:127
chr1	973693	.	C	T	246.13	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=-1.093e+00;ClippingRankSum=0.00;DP=99;ExcessHet=3.0103;FS=1.484;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=8.20;ReadPosRankSum=-5.500e-01;SOR=0.368;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:35,0:35:71:0,71,1147:70	0|1:18,12:30:99:277,0,495:70	0|0:34,0:34:99:0,99,1076:70
chr1	973858	.	G	C	4082.13	PASS	AC=5;AF=0.833;AN=6;BaseQRankSum=3.39;ClippingRankSum=0.00;DP=111;ExcessHet=3.0103;FS=1.295;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=25.49;ReadPosRankSum=-1.446e+00;SOR=0.573;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,46:46:99:1|1:973858_G_C:2061,141,0:116	1|1:0,39:39:99:.:.:1398,117,0:116	1|0:9,17:26:99:0|1:973858_G_C:654,0,429:116
chr1	973862	.	A	G	3040.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=1.87;ClippingRankSum=0.00;DP=111;ExcessHet=3.9794;FS=2.628;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.39;ReadPosRankSum=1.10;SOR=0.535;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,45:45:99:1|1:973858_G_C:2057,141,0:127	1|0:28,14:42:99:.:.:335,0,710:127	1|0:9,15:24:99:0|1:973858_G_C:680,0,426:127
chr1	973946	.	C	T	2113.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=0.472;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=6.587;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.57;ReadPosRankSum=-7.180e-01;SOR=0.354;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,41:41:99:1308,123,0:123	1|0:21,15:36:99:380,0,581:123	1|0:14,17:31:99:457,0,364:123
chr1	974039	.	C	T	258.13	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=3.48;ClippingRankSum=0.00;DP=102;ExcessHet=3.0103;FS=1.451;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=8.33;ReadPosRankSum=-6.890e-01;SOR=0.721;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:38,0:38:99:0,101,1140:83	0|0:33,0:33:84:0,84,952:83	0|1:20,11:31:99:289,0,472:83
chr1	974388	.	A	G	2448.90	PASS	AC=6;AF=1.00;AN=6;DP=77;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.80;SOR=0.828;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,19:19:57:624,57,0:59	1|1:0,38:38:99:1163,114,0:59	1|1:0,20:20:60:688,60,0:59
chr1	975014	.	C	T	2321.13	PASS	AC=5;AF=0.833;AN=6;BaseQRankSum=-9.910e-01;ClippingRankSum=0.00;DP=93;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=24.96;ReadPosRankSum=-8.060e-01;SOR=0.685;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,27:27:80:797,80,0:79	1|0:11,20:31:99:517,0,269:79	1|1:0,35:35:99:1038,103,0:79
chr1	975093	.	G	A	1865.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=0.00;ClippingRankSum=0.00;DP=90;ExcessHet=3.9794;FS=4.724;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=20.72;ReadPosRankSum=1.31;SOR=0.304;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,28:28:84:878,84,0:84	1|0:11,19:30:99:505,0,262:84	1|0:13,19:32:99:514,0,325:84
chr1	976215	.	A	G	789.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.55;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=2.113;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=12.33;ReadPosRankSum=-7.620e-01;SOR=1.096;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:36,0:36:99:0,99,1485:99	0|1:17,18:35:99:473,0,399:99	0|1:14,15:29:99:348,0,400:99
chr1	976536	.	C	T	2364.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=0.706;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=2.988;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=21.89;ReadPosRankSum=-2.150e+00;SOR=0.392;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,45:45:99:1443,135,0:127	1|0:10,19:29:99:554,0,234:127	1|0:19,15:34:99:399,0,488:127
chr1	978230	.	G	A	1394.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=0.979;ClippingRankSum=0.00;DP=75;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=18.59;ReadPosRankSum=0.730;SOR=0.756;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:1,27:28:48:743,48,0:48	1|0:8,15:23:99:338,0,120:48	1|0:10,14:24:99:345,0,187:48
chr1	978509	.	G	A	483.13	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=2.71;ClippingRankSum=0.00;DP=129;ExcessHet=3.0103;FS=2.509;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.28;ReadPosRankSum=0.255;SOR=0.742;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:41,0:41:74:0,74,1045:70	0|1:27,20:47:99:514,0,622:70	0|0:41,0:41:74:0,74,1066:70
chr1	978953	.	C	G	294.13	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=1.80;ClippingRankSum=0.00;DP=103;ExcessHet=3.0103;FS=1.412;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.49;ReadPosRankSum=-1.223e+00;SOR=0.681;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:32,0:32:96:0,96,1072:49	0|1:18,13:31:99:325,0,432:49	0|0:40,0:40:50:0,50,981:49
chr1	979182	.	G	C	2209.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=4.64;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=0.775;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=20.27;ReadPosRankSum=0.899;SOR=0.824;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,34:34:99:.:.:1091,102,0:101	1|0:18,20:38:99:.:.:571,0,381:101	1|0:16,21:37:99:1|0:979163_C_T:579,0,380:101


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FILE: tests/AnnotSV/test_24_HtzCompound/input/3samples.theSV.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	father	mother	prob
chr1	934051	DEL00000005	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=934869;PE=10;MAPQ=60;CT=3to5;CIPOS=-72,72;CIEND=-72,72;RDRATIO=0.544828	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/0:-51.0882,0,-14.6956:147:PASS:49:15:32:0:5:10:0:0	0/1:-9.60325,0,-21.6918:96:PASS:53:18:34:0:6:2:0:0	1/0:0,-2.37679,-28.3685:24:PASS:53:30:26:1:8:0:0:0


================================================
FILE: tests/AnnotSV/test_24_HtzCompound/input/3samples.theSnvindel.vcf
================================================
##fileformat=VCFv4.2
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	prob	father	mother
chr1	925036	.	G	A	509.17	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.31;ClippingRankSum=0.00;DP=65;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=11.07;ReadPosRankSum=-3.800e-02;SOR=0.752;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:19,0:19:28:0,28,462:28	0|1:13,13:26:99:329,0,334:28	0|1:11,9:20:99:212,0,248:28
chr1	925141	.	C	A	2468.90	PASS	AC=6;AF=1.00;AN=6;DP=78;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.65;SOR=2.185;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,26:26:78:822,78,0:74	1|1:0,27:27:81:871,81,0:74	1|1:0,25:25:75:802,75,0:74
chr1	926250	.	G	A	785.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.53;ClippingRankSum=0.00;DP=104;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.47;ReadPosRankSum=1.05;SOR=0.801;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:29,0:29:81:0,81,937:81	0|1:18,14:32:99:340,0,409:81	0|1:25,18:43:99:477,0,617:81
chr1	926428	.	A	G	3587.90	PASS	AC=6;AF=1.00;AN=6;DP=127;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=28.25;SOR=0.808;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,37:37:99:1025,111,0:127	1|1:0,47:47:99:1363,141,0:127	1|1:0,43:43:99:1226,129,0:127
chr1	926713	.	T	C	4075.90	PASS	AC=6;AF=1.00;AN=6;DP=125;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.61;SOR=0.958;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,42:42:99:1374,126,0:101	1|1:0,34:34:99:1128,102,0:101	1|1:0,49:49:99:1600,147,0:101
chr1	926744	.	A	G	3916.90	PASS	AC=6;AF=1.00;AN=6;DP=129;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=30.36;SOR=1.335;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,41:41:99:1189,123,0:99	1|1:0,33:33:99:1027,99,0:99	1|1:0,55:55:99:1727,165,0:99
chr1	927003	.	C	T	5305.90	PASS	AC=6;AF=1.00;AN=6;DP=120;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.47;SOR=0.796;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,47:47:99:1|1:927003_C_T:2055,141,0:89	1|1:0,30:30:90:1|1:927003_C_T:1339,90,0:89	1|1:0,43:43:99:1|1:927003_C_T:1938,132,0:89
chr1	927486	.	C	T	1097.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=3.54;ClippingRankSum=0.00;DP=125;ExcessHet=3.9794;FS=0.836;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.38;ReadPosRankSum=0.816;SOR=0.523;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:43,0:43:99:0,118,1330:118	0|1:20,23:43:99:621,0,381:118	0|1:21,18:39:99:508,0,500:118
chr1	927744	.	G	T	3950.90	PASS	AC=6;AF=1.00;AN=6;DP=123;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.12;SOR=0.885;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,46:46:99:.:.:1480,138,0:109	1|1:0,40:40:99:.:.:1304,120,0:109	1|1:0,37:37:99:1|1:927744_G_T:1193,110,0:109
chr1	928622	.	G	C	2008.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=-2.044e+00;ClippingRankSum=0.00;DP=123;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=16.33;ReadPosRankSum=0.494;SOR=0.696;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:2,30:32:47:777,47,0:47	1|0:17,23:40:99:549,0,420:47	1|0:22,29:51:99:714,0,567:47
chr1	929346	.	T	A	3757.90	PASS	AC=6;AF=1.00;AN=6;BaseQRankSum=-3.210e-01;ClippingRankSum=0.00;DP=116;ExcessHet=3.0103;FS=3.402;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=32.40;ReadPosRankSum=-5.060e-01;SOR=0.535;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,41:41:99:1355,123,0:72	1|1:1,35:36:73:1117,73,0:72	1|1:0,39:39:99:1312,117,0:72
chr1	929375	.	A	G	4310.90	PASS	AC=6;AF=1.00;AN=6;BaseQRankSum=-1.113e+00;ClippingRankSum=0.00;DP=100;ExcessHet=3.0103;FS=3.872;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.52;ReadPosRankSum=-7.180e-01;SOR=0.872;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,33:33:99:1|1:929375_A_G:1459,99,0:45	1|1:1,33:34:45:1|1:929375_A_G:1386,45,0:45	1|1:0,33:33:99:1|1:929375_A_G:1492,102,0:45
chr1	929377	.	G	A	4310.90	PASS	AC=6;AF=1.00;AN=6;BaseQRankSum=-1.270e-01;ClippingRankSum=0.00;DP=100;ExcessHet=3.0103;FS=3.872;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.10;ReadPosRankSum=-7.150e-01;SOR=0.872;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,33:33:99:1|1:929375_A_G:1459,99,0:45	1|1:1,32:33:45:1|1:929375_A_G:1386,45,0:45	1|1:0,34:34:99:1|1:929375_A_G:1492,102,0:45
chr1	929558	.	G	A	1031.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.49;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=4.432;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.39;ReadPosRankSum=0.699;SOR=1.218;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:28,0:28:81:0,81,1215:81	0|1:14,14:28:99:386,0,331:81	0|1:23,26:49:99:677,0,481:81
chr1	929839	.	G	A	1482.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=1.32;ClippingRankSum=0.00;DP=80;ExcessHet=3.9794;FS=0.898;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=18.53;ReadPosRankSum=-9.860e-01;SOR=0.527;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	1|1:0,26:26:77:1|1:929839_G_A:873,77,0:77	1|0:13,8:21:99:.:.:190,0,370:77	1|0:15,18:33:99:.:.:451,0,362:77
chr1	930939	.	G	A	3741.90	PASS	AC=6;AF=1.00;AN=6;DP=118;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.71;SOR=0.798;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,43:43:99:1382,129,0:95	1|1:0,43:43:99:1345,129,0:95	1|1:0,32:32:96:1041,96,0:95
chr1	931131	.	C	CCCCT	499.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.054;ClippingRankSum=0.00;DP=59;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=16.64;ReadPosRankSum=-1.030e-01;SOR=0.576;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:29,0:29:51:0,51,765:51	0|1:7,7:14:99:273,0,297:51	0|1:9,7:16:99:267,0,373:51
chr1	931513	.	T	C	1145.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.64;ClippingRankSum=0.00;DP=112;ExcessHet=3.9794;FS=0.883;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=15.48;ReadPosRankSum=-5.200e-02;SOR=0.565;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:38,0:38:99:0,100,1175:99	0|1:15,17:32:99:476,0,354:99	0|1:16,26:42:99:701,0,430:99
chr1	932204	.	A	T	1074.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.76;ClippingRankSum=0.00;DP=126;ExcessHet=3.9794;FS=0.815;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.21;ReadPosRankSum=-2.040e-01;SOR=0.556;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:38,0:38:99:0,102,1206:101	0|1:17,22:39:99:637,0,433:101	0|1:29,20:49:99:469,0,724:101
chr1	932613	.	GTTTC	G	1335.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.06;ClippingRankSum=0.00;DP=110;ExcessHet=3.9794;FS=4.398;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=18.04;ReadPosRankSum=0.190;SOR=0.997;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:36,0:36:99:0,99,1145:99	0|1:17,19:36:99:747,0,721:99	0|1:21,17:38:99:629,0,1001:99
chr1	932949	.	A	C	3814.90	PASS	AC=6;AF=1.00;AN=6;DP=120;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.79;SOR=0.871;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,48:48:99:1467,143,0:77	1|1:0,26:26:78:882,78,0:77	1|1:0,46:46:99:1492,137,0:77
chr1	932976	.	C	T	2246.16	PASS	AC=4;AF=0.667;AN=6;BaseQRankSum=2.74;ClippingRankSum=0.00;DP=118;ExcessHet=3.9794;FS=1.547;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.04;ReadPosRankSum=0.626;SOR=0.920;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,47:47:99:1503,141,0:127	1|0:18,7:25:99:168,0,440:127	1|0:24,22:46:99:607,0,600:127
chr1	933024	.	C	T	766.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-1.026e+00;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=2.124;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.56;ReadPosRankSum=0.784;SOR=1.034;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:42,0:42:99:0,108,1620:108	0|1:8,12:22:99:356,0,217:108	0|1:23,18:41:99:442,0,633:108
chr1	933411	.	C	T	999.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.415;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.07;ReadPosRankSum=0.599;SOR=0.607;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:37,0:37:99:0,100,1152:99	0|1:11,17:28:99:467,0,253:99	0|1:21,22:43:99:564,0,524:99
chr1	933511	.	A	G	4079.90	PASS	AC=6;AF=1.00;AN=6;DP=127;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.13;SOR=0.774;set=Intersection	GT:AD:DP:GQ:PL:TP	1|1:0,51:51:99:1623,153,0:107	1|1:0,40:40:99:1344,120,0:107	1|1:0,36:36:99:1139,108,0:107
chr1	933548	.	A	AG	615.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-1.074e+00;ClippingRankSum=0.00;DP=118;ExcessHet=3.9794;FS=15.502;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=7.69;ReadPosRankSum=0.165;SOR=0.983;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:38,0:38:99:0,99,1200:99	0|1:22,24:46:99:385,0,347:99	0|1:17,17:34:99:271,0,273:99
chr1	934601	.	C	T	942.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.43;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=12.166;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.24;ReadPosRankSum=-5.380e-01;SOR=2.012;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:32,0:32:93:0,93,1395:93	0|1:22,21:43:99:540,0,607:93	0|1:18,16:34:99:434,0,463:93
chr1	934758	.	T	TG	265.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=-3.150e-01;ClippingRankSum=0.00;DP=114;ExcessHet=3.9794;FS=2.141;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=3.68;ReadPosRankSum=2.34;SOR=1.066;set=Intersection	GT:AD:DP:GQ:PL:TP	1|0:42,0:42:77:0,77,1181:76	0|1:23,14:37:99:181,0,371:76	0|1:24,11:35:99:125,0,395:76
chr1	935523	.	T	C	1002.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.520;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=3.200;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.92;ReadPosRankSum=0.446;SOR=0.967;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:37,0:37:99:0,105,1086:104	0|1:18,24:42:99:648,0,499:104	0|1:16,14:30:99:386,0,446:104
chr1	935954	.	G	T	807.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.63;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=6.287;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=11.21;ReadPosRankSum=-1.399e+00;SOR=0.497;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:36,0:36:99:0,99,1300:99	0|1:21,17:38:99:445,0,565:99	0|1:19,15:34:99:394,0,498:99
chr1	938178	.	G	T	1052.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.615;ClippingRankSum=0.00;DP=107;ExcessHet=3.9794;FS=0.877;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.41;ReadPosRankSum=1.81;SOR=0.816;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:34,0:34:99:0,99,1001:99	0|1:11,13:24:99:344,0,270:99	0|1:22,27:49:99:740,0,561:99
chr1	939779	.	AGCCAGTGGACGCCGACCT	A	1734.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.801;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=20.89;ReadPosRankSum=2.93;SOR=0.721;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:36,0:36:90:0,90,1112:90	0|1:27,20:47:99:758,0,3830:90	0|1:11,25:36:99:1017,0,1516:90
chr1	940262	.	C	CG	80.12	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=-1.645e+00;ClippingRankSum=0.00;DP=34;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=16.02;ReadPosRankSum=0.253;SOR=1.022;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:19,0:19:22:.:.:0,22,440:21	0|0:10,0:10:30:.:.:0,30,297:21	0|1:2,3:5:75:0|1:940256_C_T:120,0,75:21
chr1	940263	.	C	G,CG	186.16	PASS	AC=1,1;AF=0.167,0.167;AN=6;BaseQRankSum=1.07;ClippingRankSum=0.00;DP=31;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=15.51;ReadPosRankSum=0.484;SOR=0.293;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL	0/0:19,0,0:19:51:.:.:0,51,765,51,765,765	0/1:3,4,0:7:53:.:.:98,0,53,107,65,172	0/2:2,0,3:5:75:0|1:940256_C_T:120,126,210,0,84,75
chr1	940296	.	GCC	G	65.91	PASS	AC=1;AF=0.250;AN=4;BaseQRankSum=-5.240e-01;ClippingRankSum=0.00;DP=30;ExcessHet=3.0103;FS=0.000;MQ=47.86;MQ0=0;MQRankSum=0.00;QD=13.18;ReadPosRankSum=-5.240e-01;SOR=0.693;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:21,0:21:28:0,28,500:26	0|1:1,4:5:15:104,0,15:26	./.:4,0:4:.:0,0,0
chr1	940390	.	A	G	470.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=1.48;ClippingRankSum=0.00;DP=62;ExcessHet=3.9794;FS=4.039;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=12.37;ReadPosRankSum=0.047;SOR=0.202;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:24,0:24:47:0,47,734:47	0|1:14,6:20:99:149,0,372:47	0|1:6,12:18:99:353,0,154:47
chr1	940820	.	G	C	159.13	PASS	AC=1;AF=0.167;AN=6;BaseQRankSum=3.26;ClippingRankSum=0.00;DP=102;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=3.88;ReadPosRankSum=-1.373e+00;SOR=0.892;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:27,0:27:75:0,75,1125:74	0|0:34,0:34:99:0,99,1081:74	0|1:32,9:41:99:190,0,774:74
chr1	941119	.	A	G	533.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.057;ClippingRankSum=0.00;DP=87;ExcessHet=3.9794;FS=5.572;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.52;ReadPosRankSum=1.19;SOR=1.034;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:31,0:31:79:0,79,989:79	0|1:17,13:30:99:316,0,460:79	0|1:16,10:26:99:249,0,455:79
chr1	942335	.	C	G	869.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.406;ClippingRankSum=0.00;DP=86;ExcessHet=3.9794;FS=3.665;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.25;ReadPosRankSum=2.31;SOR=1.270;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:25,0:25:72:0,72,778:72	0|1:11,16:27:99:384,0,231:72	0|1:13,21:34:99:517,0,286:72
chr1	943526	.	CTTT	C	897.12	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.996;ClippingRankSum=0.00;DP=51;ExcessHet=3.9794;FS=1.505;MQ=68.61;MQ0=0;MQRankSum=0.00;QD=36.27;ReadPosRankSum=-3.860e-01;SOR=0.396;set=Intersection	GT:AD:DP:GQ:PL:TP	0|0:6,0:16:3:0,3,107:4	0|1:1,11:18:35:377,0,35:4	0|1:1,11:17:20:376,0,20:4
chr1	944296	.	G	A	1602.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=0.809;ClippingRankSum=0.00;DP=115;ExcessHet=3.9794;FS=0.864;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.54;ReadPosRankSum=0.593;SOR=0.858;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:33,0:33:90:.:.:0,90,1350:90	0|1:25,29:54:99:0|1:944296_G_A:1108,0,1292:90	0|1:9,19:28:99:.:.:526,0,178:90
chr1	944307	.	T	C	1562.16	PASS	AC=2;AF=0.333;AN=6;BaseQRankSum=2.73;ClippingRankSum=0.00;DP=114;ExcessHet=3.9794;FS=4.260;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.05;ReadPosRankSum=0.919;SOR=1.179;set=Intersection	GT:AD:DP:GQ:PGT:PID:PL:TP	0|0:32,0:32:93:.:.:0,93,1395:93	0|1:26,30:56:99:0|1:944296_G_A:1118,0,1320:93	0|1:10,16:26:99:.:.:476,0,206:93


================================================
FILE: tests/AnnotSV/test_24_HtzCompound/input/configfile
================================================
# This file is used to simplify the configuration of AnnotSV.
# Anything behind a hashtag is considered as a comment
# Please, feel free to change the AnnotSV options.

#------------------
# AnnotSV Options :
#------------------

-candidateGenesFiltering:   0

-genomeBuild:               GRCh37

-hpo:                       ""

-includeCI:                 1

-metrics:                   "us"

-minTotalNumber:            "500"

-overlap:                   100

-overwrite:                 1

-promoterSize:              500

-rankFiltering:             "1-5,NA"

-reciprocal:                0

-snvindelPASS:              0

-SVinputInfo:               1

-SVminSize:                 50

-annotationMode:            "both"


#------------------------
# AnnotSV Output columns:
#------------------------
# Output column names are listed below.
# In order to disable default annotations provided by AnnotSV, some column names (the ones that are not marked with an *) can be commented with a hash character ("#") by the user.

AnnotSV_ID                      *
SV_chrom                        *
SV_start                        *
SV_end                          *
SV_length                       *
SV_type                         *
#Samples_ID
Annotation_mode                 *

# Genes annotations:
Gene_name                       *
Gene_count                      *
Tx                              *
Tx_start                        *
Tx_end                          *
Exon_count
Overlapped_tx_length            *
Overlapped_CDS_length           *
Frameshift                      *
Location                        *
Location2                       *
Dist_nearest_SS                 *
Nearest_SS_type                 *
Intersect_start                 *
Intersect_end                   *

# Regulatory Elements annotations:
RE_gene                         *

# Annotations with benign genes or genomic regions:
B_gain_source                   *
B_gain_coord                    *
B_loss_source                   *
B_loss_coord                    *
B_ins_source                    
B_ins_coord                     
B_inv_source                    
B_inv_coord

# Annotations with pathogenic genes or genomic regions:
P_gain_phen 
P_gain_hpo 
P_gain_source 
P_gain_coord 
P_loss_phen 
P_loss_hpo 
P_loss_source 
P_loss_coord
P_ins_phen
P_ins_hpo
P_ins_source
P_ins_coord
P_inv_phen
P_inv_hpo
P_inv_source
P_inv_coord

# Annotations with pathogenic snv/indel:
P_snvindel_nb
P_snvindel_phen

# Cancer
Cosmic_ID
Cosmic_mut_typ

# Breakpoints annotations
TAD_coordinate
ENCODE_experiment
GC_content_left
GC_content_right
Repeat_coord_left
Repeat_type_left
Repeat_coord_right
Repeat_type_right
Gap_left
Gap_right
SegDup_left
SegDup_right
ENCODE_blacklist_left
ENCODE_blacklist_characteristics_left
ENCODE_blacklist_right
ENCODE_blacklist_characteristics_right

# Gene-based annotations:
ACMG
HI                              *
TS                              *
DDD_status
DDD_mode
DDD_consequence
DDD_disease
DDD_pmid
DDD_HI_percent
ExAC_synZ
ExAC_misZ
ExAC_delZ
ExAC_dupZ
ExAC_cnvZ
LOEUF_bin
ExAC_pLI                        
GnomAD_pLI                      *
OMIM_morbid                     *
OMIM_morbid_candidate           *
OMIM_ID
OMIM_phenotype
OMIM_inheritance
Exomiser_gene_pheno_score
Human_pheno_evidence
Mouse_pheno_evidence
Fish_pheno_evidence

# Ranking:
AnnotSV_ranking_score
AnnotSV_ranking_criteria
ACMG_class




================================================
FILE: tests/AnnotSV/test_24_HtzCompound/input/test1.SV.bed
================================================
2	27313898	27314025	DEL


================================================
FILE: tests/AnnotSV/test_24_HtzCompound/input/test1.SV.vcf
================================================
##fileformat=VCFv4.2
##source=LUMPY
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=STRANDS,Number=.,Type=String,Description="Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description="Confidence interval (95%) around POS for imprecise variants">
##INFO=<ID=CIEND95,Number=2,Type=Integer,Description="Confidence interval (95%) around END for imprecise variants">
##INFO=<ID=MATEID,Number=.,Type=String,Description="ID of mate breakends">
##INFO=<ID=EVENT,Number=1,Type=String,Description="ID of event associated to breakend">
##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description="Secondary breakend in a multi-line variants">
##INFO=<ID=SU,Number=.,Type=Integer,Description="Number of pieces of evidence supporting the variant across all samples">
##INFO=<ID=PE,Number=.,Type=Integer,Description="Number of paired-end reads supporting the variant across all samples">
##INFO=<ID=SR,Number=.,Type=Integer,Description="Number of split reads supporting the variant across all samples">
##INFO=<ID=BD,Number=.,Type=Integer,Description="Amount of BED evidence supporting the variant across all samples">
##INFO=<ID=EV,Number=.,Type=String,Description="Type of LUMPY evidence contributing to the variant call">
##INFO=<ID=PRPOS,Number=.,Type=String,Description="LUMPY probability curve of the POS breakend">
##INFO=<ID=PREND,Number=.,Type=String,Description="LUMPY probability curve of the END breakend">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=DUP:TANDEM,Description="Tandem duplication">
##ALT=<ID=INS,Description="Insertion of novel sequence">
##ALT=<ID=CNV,Description="Copy number variable region">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=SU,Number=1,Type=Integer,Description="Number of pieces of evidence supporting the variant">
##FORMAT=<ID=PE,Number=1,Type=Integer,Description="Number of paired-end reads supporting the variant">
##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Number of split reads supporting the variant">
##FORMAT=<ID=BD,Number=1,Type=Integer,Description="Amount of BED evidence supporting the variant">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample-001	sample-002
2	27313898	606	N	<DEL>	59.61	.	SVTYPE=DEL;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043	0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13


================================================
FILE: tests/AnnotSV/test_24_HtzCompound/input/test1.SV.withoutGT.vcf
================================================
##fileformat=VCFv4.2
##source=LUMPY
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=STRANDS,Number=.,Type=String,Description="Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description="Confidence interval (95%) around POS for imprecise variants">
##INFO=<ID=CIEND95,Number=2,Type=Integer,Description="Confidence interval (95%) around END for imprecise variants">
##INFO=<ID=MATEID,Number=.,Type=String,Description="ID of mate breakends">
##INFO=<ID=EVENT,Number=1,Type=String,Description="ID of event associated to breakend">
##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description="Secondary breakend in a multi-line variants">
##INFO=<ID=SU,Number=.,Type=Integer,Description="Number of pieces of evidence supporting the variant across all samples">
##INFO=<ID=PE,Number=.,Type=Integer,Description="Number of paired-end reads supporting the variant across all samples">
##INFO=<ID=SR,Number=.,Type=Integer,Description="Number of split reads supporting the variant across all samples">
##INFO=<ID=BD,Number=.,Type=Integer,Description="Amount of BED evidence supporting the variant across all samples">
##INFO=<ID=EV,Number=.,Type=String,Description="Type of LUMPY evidence contributing to the variant call">
##INFO=<ID=PRPOS,Number=.,Type=String,Description="LUMPY probability curve of the POS breakend">
##INFO=<ID=PREND,Number=.,Type=String,Description="LUMPY probability curve of the END breakend">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=DUP:TANDEM,Description="Tandem duplication">
##ALT=<ID=INS,Description="Insertion of novel sequence">
##ALT=<ID=CNV,Description="Copy number variable region">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=SU,Number=1,Type=Integer,Description="Number of pieces of evidence supporting the variant">
##FORMAT=<ID=PE,Number=1,Type=Integer,Description="Number of paired-end reads supporting the variant">
##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Number of split reads supporting the variant">
##FORMAT=<ID=BD,Number=1,Type=Integer,Description="Amount of BED evidence supporting the variant">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample-001	sample-002
2	27313898	606	N	<DEL>	59.61	.	SVTYPE=DEL;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6	TT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/0:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043	0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13


================================================
FILE: tests/AnnotSV/test_24_HtzCompound/input/test1.snvindel.vcf
================================================
##fileformat=VCFv4.2
##source=LUMPY
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=STRANDS,Number=.,Type=String,Description="Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description="Confidence interval (95%) around POS for imprecise variants">
##INFO=<ID=CIEND95,Number=2,Type=Integer,Description="Confidence interval (95%) around END for imprecise variants">
##INFO=<ID=MATEID,Number=.,Type=String,Description="ID of mate breakends">
##INFO=<ID=EVENT,Number=1,Type=String,Description="ID of event associated to breakend">
##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description="Secondary breakend in a multi-line variants">
##INFO=<ID=SU,Number=.,Type=Integer,Description="Number of pieces of evidence supporting the variant across all samples">
##INFO=<ID=PE,Number=.,Type=Integer,Description="Number of paired-end reads supporting the variant across all samples">
##INFO=<ID=SR,Number=.,Type=Integer,Description="Number of split reads supporting the variant across all samples">
##INFO=<ID=BD,Number=.,Type=Integer,Description="Amount of BED evidence supporting the variant across all samples">
##INFO=<ID=EV,Number=.,Type=String,Description="Type of LUMPY evidence contributing to the variant call">
##INFO=<ID=PRPOS,Number=.,Type=String,Description="LUMPY probability curve of the POS breakend">
##INFO=<ID=PREND,Number=.,Type=String,Description="LUMPY probability curve of the END breakend">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=DUP:TANDEM,Description="Tandem duplication">
##ALT=<ID=INS,Description="Insertion of novel sequence">
##ALT=<ID=CNV,Description="Copy number variable region">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=SU,Number=1,Type=Integer,Description="Number of pieces of evidence supporting the variant">
##FORMAT=<ID=PE,Number=1,Type=Integer,Description="Number of paired-end reads supporting the variant">
##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Number of split reads supporting the variant">
##FORMAT=<ID=BD,Number=1,Type=Integer,Description="Amount of BED evidence supporting the variant">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample-001	sample-002
2	27313998	606	A	ATC	59.61	.	CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6	GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/1:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043	0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13


================================================
FILE: tests/AnnotSV/test_24_HtzCompound/input/test1.snvindel.withoutGT.vcf
================================================
##fileformat=VCFv4.2
##source=LUMPY
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=STRANDS,Number=.,Type=String,Description="Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description="Confidence interval (95%) around POS for imprecise variants">
##INFO=<ID=CIEND95,Number=2,Type=Integer,Description="Confidence interval (95%) around END for imprecise variants">
##INFO=<ID=MATEID,Number=.,Type=String,Description="ID of mate breakends">
##INFO=<ID=EVENT,Number=1,Type=String,Description="ID of event associated to breakend">
##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description="Secondary breakend in a multi-line variants">
##INFO=<ID=SU,Number=.,Type=Integer,Description="Number of pieces of evidence supporting the variant across all samples">
##INFO=<ID=PE,Number=.,Type=Integer,Description="Number of paired-end reads supporting the variant across all samples">
##INFO=<ID=SR,Number=.,Type=Integer,Description="Number of split reads supporting the variant across all samples">
##INFO=<ID=BD,Number=.,Type=Integer,Description="Amount of BED evidence supporting the variant across all samples">
##INFO=<ID=EV,Number=.,Type=String,Description="Type of LUMPY evidence contributing to the variant call">
##INFO=<ID=PRPOS,Number=.,Type=String,Description="LUMPY probability curve of the POS breakend">
##INFO=<ID=PREND,Number=.,Type=String,Description="LUMPY probability curve of the END breakend">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=DUP:TANDEM,Description="Tandem duplication">
##ALT=<ID=INS,Description="Insertion of novel sequence">
##ALT=<ID=CNV,Description="Copy number variable region">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=SU,Number=1,Type=Integer,Description="Number of pieces of evidence supporting the variant">
##FORMAT=<ID=PE,Number=1,Type=Integer,Description="Number of paired-end reads supporting the variant">
##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Number of split reads supporting the variant">
##FORMAT=<ID=BD,Number=1,Type=Integer,Description="Amount of BED evidence supporting the variant">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample-001	sample-002
2	27313998	606	A	ATC	59.61	.	CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6	tT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB	0/1:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043	0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13


================================================
FILE: tests/AnnotSV/test_25_big-ref-alt/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


###################################################################
## Bug: out of memory
## In the VCF input file, some ref or alt values are very larges
###################################################################

## With AnnotSV "2.2" and before
##    couldn't compile regular expression pattern: out of memory
##    while executing
##    "regexp -nocase "$refbis" $altbis"
##    (procedure "VCFsToBED" line 116)


## => Then bugfix added

# ./input/input_1-big-ref.vcf
# => ref with 43367 bp

mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input_1-big-ref.vcf" -outputFile "./output/test_tcl.annotated.tsv" -genomeBuild GRCh37 &> ./output/output.log

if [ `grep -c "AnnotSV is done with the analysis" "./output/output.log"` == 1 ] 
then
        echo "Ok"
else
        echo "error 1: AnnotSV does not finished"
        exit 1

fi




echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_25_big-ref-alt/input/input_1-big-ref.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	UnnamedSample
3	129763380	pbsv.DEL.7916	CACAAAAACACGTGCACACATGCACACACAGATGCACACAGACTCATGCAGACAGATACAGACACACATGCACACACAGATGCACACACATGCACACAGCCACATGCACACACTCACACGTATGCACACACATGCACATACACACATGCTTACAGACGCACATGCACACGTGCACATGCACACACATGCACACACGCACACGCACACGTGCACACGTGCACACACACGCACACACATGGACACACATGCACACATACACACACACCACTCCTTTTCCATTTCTCTAATTTCCAATTTTTTTCTATGAGCTTCCTCAGGCTCATGATCTTGATTCTAGAATGAATTCAGGGAGTAAGTCTGTATTATTGAAATGACACTAAATTCAATCATGCCTAAGAGGCTTTTTCAATGTTGGGGAAACCATCTCACAGATCATTCAAATGACCCCAGGAGACACTTCACCAGGAACACTTGTTCATCTCCCTCTCCCTTCTGCCAACCTCTGTGCTTTAATATCAGGGGACAAACCTCTCGATTTTGGTTTCTCATCTCTTTGTCCCCATGTACACTGGACTGCACTACTGTGTCAAAGCTACTTGCAGCCTGACCTGGGAAATGTACTTTTGGATTCACTCGATTTGCCACCTATTTGGGTGGTTTGGGCTGGAAACTGCCCTGCTCACACTCTTGGCTCCCAGCTGCTCCTGCTTTGGGGGTGCCTAGAGACCCCAGCTCAACCCATGGGTCACATCCCCACAGTGGGGCCGGGGATGCGACTGAGAGTTTTCTGGGCACCTCTCTCCAGCAGCATTGAGGATGGAGCTCAGCACTGTGTGACATTGGCTGGTGGCCACTGCCTGTTTAGGTCGAAATGGCCCAGCCTGATGTCCACATGCACCTCTGCGGCACACTGGCCTGCAGACCCCTGAGCATGCGCTGCATGCTTCTCACCTCTAGAGTGGCCACGCAGACAGGGATACCGACACACCAAGAAAATCCACAGGCAAGCCCAGAGGCCCCCGTTCTACTAGGGCTTTGTGAGCCCCTGTGATTTGAGTCACGAGCTTCTTGTGGTGATTTCATTTAGCTAACATCCAACACAGTGCATTTAGAGACTCTTTCTCTTGGACATTATATGGAGGCGTGGCCATGGTTTGCTGAGATAAATGCCCCAAAACACCCCTCAATAAAACCAAATAACAGCTCATCAACTCTTTACATTAAAAAAAAATTGACATCTTATAAATAGCAAATATTGGATGACAATAAGGCACAGGAAAAAGCTCATAAGCCCAGATCAGCAGTCATCATTCAATTGTTCCTTAACTACTGACTGCGCACCCGTTCTGTACCAGCACCGCATCCTAGATGCAGGGACACCACGCAAAATAAGATGACAAAGCACCTGCCCCTGTGGAGCTGAGCCACTAGCAGGAGAGACAGTCACTAAATGAATATCTCTATCCTGTGGTTTCTGGGAATGACAATCACATAAAAGGATAGAAAGGGATGGAGGAAAGCTAATTTAGACAACTCAGGATCAGAATGGGGAGGTGGTTGCATCCCTCAAAATTCAGAGTAGCTGGAGTGCAAGCCTTGTATTAGCTGAGCCTGAATCCTGGCCCTGCCGTTGTCCATGGTGTCCTCAGGCAAATGGCTCAACTCCTCTGACCACTGGCTTCAAGTGCAGAACAGGGGACCAGAGTCCCATCTCTCAGGGTTGTTGCTGTGGACTGAATTGTGTTCCCCCCAATTCACTCATTAGGAGCTAATTAACGTTAAAGGAGGTCATAAGAGTGGAATCCTAATCTGATAGGATTGATGGTTTTATAAAAAGAAGAGATGTCTCTGTCTCTGTCTCTCCCCCTCACTACTATGTGAGGACAAGCAAGAAGGCTGCTGTCTACAAGGCAGGAAGACAGCCCTTACCAGAAAGGGATTGGTGGATACTTTGATCATGAACTTCTAGCCTCCAGAACAGTGAGAAAACCAATGTCTGTTATTTAGGCCATCCGGTCTCGGGTACTTTATTATGGCAGCTGGGCTGGCTGAGGCAGTTGTTGAGAGGAACTGACAAGGTAGTTGGGGTAAAGCACACAGCATGGCCACAGCTCACTGAGCACAATGTCAGACTCATTCCCCTTCAATTGTTATTCTCTGTCTGGAGGATTTTCATGTTGGCTTTTCTCCAAGAAGCTCCCTGGGGTCTTTGTAAATATGGGGATATTTCTGACAAGAAAAATCCTTACGGTTCTTAACATTGACAATGATCAGGAACAGCAAGTCATGAAAATGAGAAGGTGGCTAGAAAAGAGAGGACCCACAGAAGAAACCAGCAACCACACAACACACACACACAGGAGGAATCCTAACGCAGGAGGAAAATAGAACATCAGGGGACCCCAAGACAGAACTCTGCATCTCATGTATTGAGATTATTCCCTGATATGGTTTGGCTGTGTCCCCACCCAAATCTCATCTGGAATTGTAGCTCCCCTAATCCGCATGTGTCATAGGAGGGACGTGGTGGGAGGTAATTGAATCATTGGGTGGGTCTTTCCCATGCTGTTCTCATGATAGTGAATAAGTCTCACAAGATCTGATGGTTTTATAAAGGGGAGTTCCCCTGCACAAGCTCTCTTGCCTGCTACCAAGTAAGACGTGACTTTGCTCCTCATTCACCTTCCACCGAGATTGTGAGGCCTCCTTAACCATGTGGAACTGTGAGTCTATTAAACCTCTTTCCTTTATAAATTACCCAGCCTCAGGCATGTCTTTATTAGTAGCATGAGAACAGACAAATACATTCCCTAAGCCTCTATTTTCCTCTGAGACAGGCTTACCCCGAATAGCCCTATCTTTGCAGGCCTTGAATAGTAATACTGTTATGTGTTACATTAACATGTATTTTACTGAAAGTCTCTGGTTTTTGTCTCTCTGAACATAGGCAGGCTTTGCTGAAACTTGCAGATGACATTCCAAAATTCATTCTATCTTAAGATAAGCAGAGAGGGGGGTGAGGAAAAATTGTACATACCTTCCCCTCAATGAAGAGGTCCCCGTGGTGTGGCCAGCCTTGGTATAAGGCTTTTGGCTCTGTTAATTCATGAGGGCTGAGTTTGATTGATCCTCATGGGGAAGACTAACAAGGGAATCCTTGGCAACCATTAGGAATAACACTCATGACCCAGAAAGTGGTTCTGTCTTCATGAGGCATCATCTGTCTTGTTTACTAAGTGACCTTCTGGCTCATTTTTCTTCCAGCCAGGGCTGGAATTCAATAATTCTAGTTCCTTCCCAAATTTTAGAGCTGGGAAATGCATTCCTCGGGTTTCTACTTTTCAAAAGCAAACAATATCTGTGGAGCTCAACTCCTAAATAGTGTGACTTTGTCTGTTTATGTGGTTCTCTTGCTGACTGCCTGGTTGCGACTGTGCCTGAACTCAGGCCTCTGTGTTTCTGAATCTTAGAAGCAGTGGTTGGCATGTCAAACTTGAAGTCATTGTCCTTTAGTTCTCTGAGTGTTATAATTGAACAGCACATTTATGAACAAGACTTTAGTAAATCCATCAGCATTCTAGGAAGCTTTGATTCATTAACCTATCTCTAATGTAAGCAAAGGCTGCCAGAGAGTCGCTAACAAGAATTCCATCTTTCTCAGAACCTTCGATTCGCTTGGGTCGAAGTTCATGCCTGTTTCATGAAAAATGCAAAACCAATTAATCACAGCTGTTCATAGTATGCCTATTCTAAGAGACCTCTGCTGTTCCTACCCGAGGGACAGCCAGAATAATTAAAGTCACAGAAATCAAACAAATGGGCCTCTGGCTAAATTATAGAAGATTAACCCAGGAAGAGCACTTATTAAATAGTAAGGAGTCCCCGAAAATATTCAAGTACAAAAAGGATTAGAAATTGTTTTAAGTGTTGGTTCCAACTTCAGGTGCTGGTCTTCCACTCCACTGCGGAAGGGAACAAATGAATTTTCCCATCCTAAAGACAGTGACATTCATCACACCCCTTGGAAGCTTAATAACATCTCGCTTTATTTTAATTGTTTATTTATTTATTTATTTACTTTTGAGATGAAGTTTCACTCTTGTTACCCAGGCTGGAGTGCAATGGCACGATCTCAGCTCACTGCAACCTCTATCTCCTGGGTTCAAGCGATTGTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACATGCCACCATGACCAGCAAATTTTTGTATTTTTATTAGAGATGGGGCTTCCCCACGTTGGCCAGGTTTGTCTCGAACTCCTGACCTCAGGCAATCTGCCTGCCTCGGCCTCCCAAAGTAATGTGATAATGCCTGTTATCATGCTGGGATAACAGGCTTGAGCCACCACCCCCGGCCAATAATATCTCATGTTAAGCATGGAGTTGCTGTCCGCTCTGTGGCCAGAGATAAAACAAGCCTCCATTACAGAGGGAGGTGGTATTGGGCTACTTTTTTGGAAACAACAGCAAAACGTGAGGCAAATTTGCTTTTAGATCCTGGTTACACTCCTGGATGGAGCTTAGCAAGCCTATGATAGGGTAGCCTGGTGGTGGCTTAGGGGAATCCTAGCCATGTCAGACAGGACAGATGCCTTTGAGGAGAGATGGCACAGTGCTGGCTCTCAGGCCCCCACTGCAGGGGGACCAGGCTGTTTATGGATTGGGTGGGAACCCTGTTAGAAAAATAAGTGGAGGCTGGGTGTGGTGGCCTATGCCTGTAATCCCAGCACCTTTGAAGGATGAAGTGGGTGGATTGCTTTAGCCCAGGAGTTCGAGACCAGCCAGGGCAACTTGGCAAAGCCCTGTCTTTAGAAAAATAATAATAATAGTTAATTAATTAGTTGATTTTTTTTTTAAAAAAAGAAAGAGAAGTGGAGCTAAGGAACACAGAGCCTGCCAGAAAGCCAAGGTGGCCAGCTAGAAGGACACAGAAGAACATTACCATAGTTCTCTCTGAGCTTTTGGACTAGGGGTGTTTCATGTGGTTTTCATATCAAACATACTTTACTTTTATACTTAGGGAGGAAAGACATAATACATACAATAAAGGTAACACGAAACAAAACTCTCACCAAAGCCTCACATCTTAGATGCTCTACTGGGTCTCTGCAATTTCTATTAGGGACCCTATGGGTTTGAATTCCATTCTAGATTTGATAAGAAAATCCAAATGCTCAACCCCCTCAACCCCCCCCACCCCTCCACCCCATTTACAAAAGCCAAGTGAAAACTAAGGAGGGGCTGGGTGCAGTGGTTCACACCTGTAATCCCAGCACTTTGGGAGTCTGAGGTGAGGGGAACACCTGAGGTCAGGAGTTCAAGAGCAGCCTGACTAACATGGTAAAATCCCATCTCTACTAAAAGTACAAAAATTAGCAAGGTGTGGTGGTGGACACCTATAATCCCAGCTACCTAGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGAGGCAGAGGTTGCAGTGAGTGGAGATTGTGCCACTGCACTCCAGCCTGGGTGAGAAAAAGCAAAACACCAAAGAAGAAGAAGAAAGAAAGGAAGAAAGAAAGAGAGAGAGAGAGAGGGAGAGAGGGAGGGTGGGAGGGAAAGAAAGAAAGAGAGAGAAAGAGAAAAAGAAAGAAAGAAAGAGAGAGAGAGGGAGAGACGGAGGGAGGGAGGGAAAGAAAGAGAGACAGAAAAAAAGAAAGAGAGACAGAGGGAGAGAAAGAAAGAAAGAAGAAGGAGAAGAAGGAAGGAAGGAAGAAAACAGGGAGAGAGAGAAAGAGAGAGAGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGAAGGAAACTAAGGAGGAAGGTGGCGTGTACAGAGGTACGGAGGCCCTCAGGTCCTAGCTGGCCCTGGGTGACAAGGGTGAAACTCCGAAGCAAGAGAAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAACTAAGGAGGAAGGTGGCGTGTACAGAGGTACGGAGGTCCTCAGGTGCTAGCCGGTACTGGTGCCTACACAGGATCCAATGGGCTGAGCTTTGCAAAAAGCTCATTGTGTAACCCAGGAAGCCCAAATTTACTTCTGAGCAGATGTCTTTTCAAAGTGATTTTCCTTTTAGGAAGTGAGAGGAGAATGAAGGGGAGGTTTATCCTACTTCTGATGTTAAAAAAGTCAAAACAAAATAAATTGGTGTTCATTGCAACTATTGGCTAAAGCACTATCATCACCAGGACCGGTACCTCAAACACACCTCCTGACAGCCTCTTCCATTCTAATCAATGTGTGCCCAACTGTGGTCACCCAGGGGCTGTTTACCTTTACTTAAAGAGAAATGCTGGTAGTAAGCCATAAAAATTACCATATTCACCATCTTTCTGCTTCAAAGAAGGTTTTAGATTAGGAATGGCTGGATCAATCACTATGAGCATGTTCTTGGGAACTAAAAGCCAAAAAGAAATATTTTAAATACGTGGTATATTTTTAAAATGTGGACTCTTAATAGATTTTTAAATGCAATGTAGATAAGATTTTAAAATCACTTTCCAAATCGGTGCAAGAGTCACTCCCTCTCCCTGTTAGATACACACACATACACACAACCCAATGCTATCCACGTGATCATCAAATCCTCCAGAGACATGGTTTTAGGCCCATTTTGCAATATTTAAAAAATGGAGAATAAAAACAAGATATGATATATCCATCCAGCAGAATTCACCTCAGTAATAAAAAGGAATGAAGGCTCGGCATGATGGCTTACACCTGTAATCCCAGCACTTTGGGAGGTCGAGGTGGACAGATTACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATATTTGAAACCCCGTCTGTACTAAAAATACAAAGTTAGCTGGGCCTGGTGGCACACGGCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCGAACATCGCACCACTGCATTCCAGCCTGGGTGACAGCGTGAGACTTCAACTCTAAAAAAAAAAAATGAAGTACTGATATGATACATGCTACAACGTGGATGAACCTCTGAAACATTACATTCAGTTAAAGAAGTCAGCCATGCACACACACACAAAACCATCCATTGCATAATTCCATTTGTATGAAATATTCAGAAAAGGCAAATCTAGAGAGAAAGTAGATGTGTGGTTACCTGGGACCGGGGGGTTAGGAATGGGGCAGTTATGGCAAATGGGCATAAGAGAGCTTCGGGGGATTGTGAAAATGTTTTAAAACTGGAGGGTAGTGATGGTTGCACAACTCTAAATTTACTAAAAATCATTGAATTGTATTCACGTGTAATAGAATTTTAAGCAAAATAAACAACACCTCAATAGAGTGGTTAACTCTGGGCTGGGCATGGTGGCTCATGCCTGTAATCCTGGCACTTTGGGAGTCTGAGGCAGGTGGATCATTTGAGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAAATACAAAAATTAGCCGGATGTGCTCACTTGAACCCAGGAAGTGGAGGTTGCAGTGAGCTGAGAGTGTGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACAGTGGTTAACTCTGAAGATGAGCTTCCCTGGACTTAGTAAAGCAAAATGACTGTGACCAACTCAAAATCCACCATTAAACTCTCCCAGCACCTGCTATTCTGCTTTCTACCCCAAGCTCTTTGCCTCTGTGTTTCCATCGTAAATCTGGAAAGAATTCGAAGACTCTGTGCTAAAGTGATTTGCTAAATATTATCAGAAAGGACTACAGAAAGATGCAGAGAGGATGGCAGCATGACCGACTCCTTTGAAGGTGGTTTAAGACTCTGCTGAACTGATGCTAAGAATAAGCCCTGGGATGTCAGAACCCCCAGGCAAAGCAGCTGGCAGATGACAACACTCGCTGAAACAGAGGGCAGAGCAGGAATTCTGCAGGCCAAGCACACTGCCGCAGGCTGGAAGAAGGGAGTGGAAACTGAATATTCCTCCTGCATAAAATTGCTTATTTTTGTTTGTTCCTCAGCCCAGCTGAGATCTTGGAGAAGTAGCAACAGGAAATGGAAAGAAAGCAAAAACAAACTGCAAATTCAATTGCACTGCTTTTTTAAAAAAGAACAAGTGAGACATCTTCAGCAGCAAGAAAACCTTGTTTCCTTTCTTGGAGGGCTTAACTAAATTCTTCTGGGGATGTCCCAGGATCAACAACCACAGGACATTCCTAGATTGTGAGTTTTCCATGTACAGGAGGCCCTGGTGCCTTCGTGCCCATCAGCAGCAAGGGAGACTTCCCAGGGAGGCCCGGTGAAGTTGCTGGAGGTGGCTGATGATTTCCAGGGCCTCGAGGAATGTCCCTTGGCTGTCCTCAGGGCACACCACTGATCCTGGGACCATGGCAGCTTCGGAGAGCTGAGCTGAGCTGCTGCAAAATGCTTTCTGCTTTAATTACCTCTCATTCATTTCTGAGCCCTGAGAAGGATGCAGTAGCCCGGGAAGTGTCAGCTCTCCCTGCCAGGGGTGGGACTTCTTTGTCATGTCTGCCTCTTGGCTTGTTCTCAAACTGTGGCTTCAGGAGGGCCTTGGCTCTTGGCAAATGCCAGAGGCTTTATAGTTTGAGAAAGAATCAGAATTTTGAAGAGGAGCTCAGAGAGGAAGGTCATTCTAGGGTGCACTTTGCAGAGTAACCAGGCAGTAAAAAGGTTAAATTGGCTGTGTATGACACAGGCCACTGCAGGGAATGTGCCCCTCTACTAAGTGAAATTGGCTCTGATATCCAGAGAATCTTTTAGGACCTTTAAAATCACCATTGTCAACACACTTGTCAGATTTTTGCATCTCCTTGTTTCAAACTGTTTTAGAATGAGGTCGGGGACTGGGGTGTGATTGATCACCATCCTGCTCCACTTCAGATATGTTGGCAAAAACACTAGGAACCACTCTTCATGGAGCTCCTACTGTGTGCAGGACCCTGTTCTCAACAGTTTAAACCAGGGCCATCTTCCTCCTCATCAACACCTTTCCTCTCCCACTCAGCAGCCTCAGTGTGTCAGCCCCTAGTGTGCAGCTAGTGTGCATACGCTAGTGTTCACCCTACAGGATGCTTCTCTTTGGAAGACTTAAACCACCAACCCAAGCTAAATTAGGCCCCCTCCACTGCTATAGTCTTCTTCCCTTTTCTAAAATAGCATTTGTCACAATAGGGCATGATGATGTGTCTGGCTATTTGGTTAATGCTTGCCTTTCTCCCTCCACTGTTCACCCCATGAAAACAGGACCGTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTCACCCCTCTCACCCAAGCTGAGTGCAGTGGTGAGATCTCAGCTCACTGCCAACTCCACCTACCAGGTTCAAGTGATTCTCCTTGTCACAGCCTCCCAAGTAGCTGGGATTACAGGCATACGTCACCATGCCCAAATAATTTTGTACTTTTAGTAGAGATGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCTTGAACCACAACGCCCAGCATTAGTTTAGTTTTTCAGAGACAGGGTTTCACTCTATTACCCAGGCTGGAGTGCAGTGGTGCAATCATAGCTCACTGCAGCCTTGAACTCTTGGGCTCAAACCTAGGCTCAAGGGATCCTCTCGCCTCAGCTTCTCAAGTACCTGGGAATATATGAATGTACACCATGCCCAGCTTACATTTATTTGTTTAAAAGACAAGAAAGAGGCCAGGCACAGTGGCTCACACCCGTAATCCCAGCATTTTGGGAGTGAGGCTGAGGCAGGAGGATTGCCTGAGCCCAGAATTTGGAGACCAGTCTGGGAAACACAGCAAGGCCTCATCTCTAATTTAAAAAAAAAAAAAAAACAAGAAAGATGATATGATACCAAATCAAATCATTTCCTTTACTAGGAAAAGGGCAAAAACAAGGGACGGTGTCAGTTAAGAATCCCTCCTTAGAGAAGCATGAAAAGTCTGCCCCAAATCTGGTAAATCCAGGAACAACTGACTGTCAAGCTGATGGTGCATTCTAGGTTAGGATGTTTTGGACCAGGTTGTACTTTGTTCCCAAAGAATTCAAGGAAAATTTGTTTAATCTGCTTAACATAGTAAAATCTTTCTTTGCAATGTCATACAAAGTTGGCATTACATATGCACTGTTGAAGAAAACGTAATTTTTTTTAAAGAATGTTCTCCAAAACCATTTAATTAGTAAAAATGTTTAATAATGATTTGAATTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCCGTGGCCTGACCTCTGCTTACTGCAAGCTCCACCTCCCGGGTTCATGCCATTCTCTTGCCTCAGCCTCTGGAGTAGCTGGGACTACAGGTGCCCACCACAACACCTGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTGAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCTGGCCCTTTGAGTACATTTTCTAAGAAGTTGGTCATGAGTTCAGACGTCTGCCTCAAAGAGATACTTGTGGTTTCCATTAAAGAACCCACTTTCCCTTTCTACAGGAGTATTTATGGGAGATATGGGCCTGGAGGTTGGAATCTATCCTGGTTGTACTTTGCTATACTGAAGTAAGGAGTAAACCTACAAATACATTCATATTGAAGTGTACAAAGGGGGCTCTACAATAGGTAGGAATTCTATTTAGTTTTGTTGGGTAACAAATCCTTTGAGAAGCAAATAACAGCTCACCTACAAAACTGGTGATCTGTATAAGTTGGGATTTTTCATGGATCAGTTTTGCTTGGATTGAACTATATAATCACAAATATATTTATACCTAGAGAGAGAGAAAGAGTGTCTGTTGAAACTGTATCATCTTAACGTGTCTATAAAAGGCAATACCTGGAAGGTGGTGGATGCCACACAGGTTAAGCTGTCTTCCCTCTGGGAGGCAGGCTTCTGGGAACTACACATTTGGTAATCTTGCCCATAAAATGCCAATTGAACACTTATTGTAGAATGCCGAGGGCACTGTAGATTCAGATAGTCCCCATCACAGGCATAGATGGTGTGTTTTTGCAGGAGTTTGGTTAGGTAACCTAGAAAATATTCAGTCGGGTTACAAAAGGCCCAGGAACCCACCAATCCTCCTTGGGTTTGGGGACAGGAGGATGTTGGTTCCCCTGGGGAAGGACTGTTGAGTTAACAACATGTGGGGTAGGGCCTCCCTAGCAGCTCTGGTGCAGAGGTCACAAAACCAGGCCCAGAGGTGAGACACAGGAGCCAATGTCAGCTTTAATTTTGATATGGAAGGGGGGCAGGGGAGTGCTGGGTAGAGAAGGGTGGGGACCCTCGCGAGGGCTCTGCCCTCGGGCTTGTGCCCTTGGACCTTAGTGAGAACAGGCACTCCTGTTTTCATGTCCAAATGTTGCATTTTCCAAGACTACTCTGGCCTGCTATGACCCCCATCCTGTGCCCATAAAAAACCCAAGACCCTAGTGGGCACAGACAAAAGTGGCTGGACATCAAGAGGAGCAGAGAAGCAGAAGAGGACACCGACAGACATCAGCAGATGCTGGCAGGCTTTTGACAGTGGGGAGATGTGGAATTCAGTTGGGGGTGGTTGGTGGAGAGTCGGGCTGCTAGACTCTAGGGGAAGACCACCTTCCCACTCCATCCCCCTTCTGGCTCCCCATCCATCTGAGAGCCACCTCCTCCACTCAATAAAATCTTGCATTCATTCTCCAAGTCCACGTGTGATCTGATTTTTCAAGTACACTAGGGCAAGAACCTGGGATACAGAAAGCCCTCTGTCTTTGTGATAAGGCAGAGGGCCTAATTGAGCTGATTAACACAAGCCACCTGCAGATGGCAAAACTGAAGGAGACCACTGTAACACATGCCCACTGGGGCTTCGGGAGCTGTAAACACCCAATTCCACAAGCTGCTGTGGGGCCAGAGCCCAGAAACGCTCCCAACGACCTGCCCGTCTGCACGCTCCCTCTAGGGGTTTGAGCAGCAGGATACTGAGAAGTGAGCCATGCCCCAGTAGCATGCCCTGCAAGGGGGATAAGGGTACTCCTCCTGTTTCAATGTATGGGTCAGAAACCTTGGTCTGGGATGGCCTACTGAATGGTTTGGAGGGCTCTTTCCCCTTCAGGAAGCACTAAGGTATTGGCCAGGAACCAAGAAGTCCTGAGCACCTTTATAAACCGGGAAAAAAAAATTGGGGTGAGTATCCCCTGGATGTGTGGATGCCCATCCTGAGGGAGGCTTTCATTTGCTCATCTCCCACTAGTGAGGCCATGCCTTATTGGGATGAGAGGATGCAGTTTCATTTCAAGAAATCACTCTTGGCTCTGTGTTGGTGCTGGAGAGGAAAGACAGGCAGGGTGCCCTGTGCAGAGAGGTGATGGTGGGGCTCTGCTGTGGGTTGAATGGTGTCCTCTCAAATTCATGTTTATCAATGTGGGGAAAAGAAAGAGAGATCAGATTGTTACTGTGTCTGTGTAGAAAGTAGAAATAAGAGACTCCATTTTGTTAGGTACTAAGAAAAATTCTTCTGTCTTGAGATGCTGTTAATCTGTAACCCTACCCCCAACCCTGTGCTCTCTGAGACATGTGCTGTGTCAACTCAGGGTTAAATGGATTAAGGGCTGTGCAGGGTGTGCTTTGTTAAACAAATGCTTGAAGGCAGCATGCTTGTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGAGACACAAAACACTGCTGAAGGCCACAGGGACCTCTGCCTGGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGATAGCCTGATATATGGCCTCCTGGGAAGGGAAAGACCTGACTGTCCCCCAGCCCGACACCCCGTAAAGCATCTTTGCTGAGGAGGATTAGTGAAAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCGCCTGCTTCTCCCTGGGCAATGGAACGTCTTGGTGTCAAGCCCGATTGTATATTCCTTCTACTGAGATAAGGGAAAACCACCTTAGGGCTGGAGGTGGGACATGCTGGCAGCAATACTGCTCTTTAATGGATTAAGATGTTTATGTGTATGCACATCAAAAGCACAGCACTTAATTCTTTACCTTGTTTAAGATGCAGAGAGCTTTGTTGACGTGTTTTCCTACTGACCTTCTCTCCGCTATTACCCTATTGTCCTGCCAAATCCCCCTCTCCGGGAAACGCCTGATAATTGTCAATAAATACTAAGGGAACTCAGAGGCCGGTGGCAGCCTGACCGGCATGGGTCCTCCATATGCTGAACGCCGGTCCCCTGGGCCCTATTTTCTTTCTCTATACCTTGTCTCTGTGTCTCTTTCTTTTCCAGGTCTCTCATTCCACCTAACGAGAAACGCCCACAGGTGTGGAGGGGCAACCCACCCCTTCAATCAGGAACCTCAGAATGTGACATTTGGAAATTGGGAGGTTGCAGATGTAACGAATTAACTTGGCGACATACTGGAGTAAGGTGGGCCCTTCACACCCTATGACTGGTATCCTTATAAGAAGAAAAGAAGAGACTCAGAGGGAAGACAGCTGTGTGCAGCTGGAATGATGCATCTGAAGCCAAGGAATGCCGTGCATTGCCGGCCACCATCCAAAACTAGAAAAAGTCAGGAAGGATTCTTCCCTAGAACCTTCAAAGGCAGTACAGCCCTGCCAACACCTGCATTCAGCCTCTGGCCTCCAGAACTGTGAGAGGATGAATTTCTGTTGTTTTCAGCCACCCAAGCTTAGGAAATGGGTTGCAGCAGACTGGGAATAAGACAGGCAGCCAGTCAGCCTCCGTGGAATTCCCAGGCAGCTTGCAGGAGCCAGAGTGGGCCCTGGGCTCTGAGAAGGTCTGAGGCCCAGCAGGCGCAGGGGCCTAAACTATTTCTCGGCAAGGAGGAAGGAAGGTTCATCCAGAACGTAGATCCCCTTCCTCCTTCTGACACCTCACGAGGTCACAGCGAGGTGGCTGGGAGGAGAGCCAGGAAGTTTTCACTGAGGTGTGTGGGAGACAGCTTGGCAGCCCTTGGTCTCTGAAGGGAGGAGGTGGTGTGAAGGAGGGCAGCTTCAGAACTTCCCAGTTCCTGCCTGATGACCTGTGTGTAAAGTATTCCCGTTTAGGTTTCAACATCCTCTCAGAAATATAATTCTCAGAAAATCCAGGCACCCAATCCAGCTCCCTGGCATTCCCTGAAATCTGAAGTCAAAGGGGCTGAGCCAGCCTGCCCTGGGTGTCAGGTCTCTGAGCCCAAGATAAGCCATCATATCCCCTGTGACCTGCACATACACATCCAGATGGCTGGTTCCTGCCTTAACTGATGACATTCCTCCACAAAAGAAGTGAAAATGGTCTGTTCCTGCCTTAACTGATGACATTCCTCCACAAAAGAAGTGAAAATGGTCTGTTCCTGCCTTAACTGATGACATTGTCTTGTGAAATTCCTTCTCCTGGCTCATTCTGGCTCAAAACCTCCCCCACTGAGTACCTTCTGACCCCCACTCTGCCTGCCAGAGAACAAACCCCCTTTGACTGTAATTTTCCTTTGCCTACCCAAATCCTATAAAATGGCCCCACCCCTATCTCCCTTTGCTGACTCTCTTTCAGACCCAGCCCACCTGCACCCAGGTGAAATAAACAGCCATGTTGCTCACAAAGTCTGTTTGGTGGTCTCTTCACATGGACGCACATGAAATTTGGTGCTGTGACTCGGATGGGGGGCCTCCCTTGGGAGATCAATCCCATGTCCTCCTGTTCTTTGCTCCATGAAAAAGATCCGCCTACAACCTCAGGTCCTCAGACCCAGCAGCCCAAGGAACATCTCACCAATTTTAAATCCGGTAAGCAGCCTCTTCTTACTCTCTTCTCCAACCTCTCCCTGTCCATCAACCACTTTCTCCTTTCCAGTCTTCAATCTCTCCATTCTCTTAATTTCAATTCCTTTCATTTTCTGGTAGAGACAAAGGAGACACGTTTTATCCGTGGACCCAAAACTCTGGCACCGGTCATGGACTGCGAAGGCAGATTTCCCTTGGTGTTTAATCATTACAGGGATGCCTCTCTGATTATTCAACCACGTTTCAAAGGTGTCAGACCACCCAGGGACGCCTGCCTTGGTCCTTCACCCTTAGTGGCAAGTCCCGCTTTTCTGAGGGAGGGACAAGTACCCCAACCCCTTCTCTCCATGTCTCTACCCCTTCTCTGCTTTTCTGGGGGAGGGGCAAATACCCCTCAACCCCTTCTCCTTCACCCTTAGTGGCAAGTCCTGCTTTTCTGGGGGAGGTGCAAGCACCCCAACCCCTTCTCTCCATGTCTCTACCCCTTCTCCACCTTTCAGGGGGGCAAGAAACCCCCAACCCCTTCTCCTTCACCCTTAGTGGCAAGTCCCACTTTTCTGGGGGAGGTACAAGTACCCCAACCTCGTATCTCTGCACCCCAATCCCTTATTTCTGCACACTGGCCCCTTTTCTCTGTGCCCCAATCCCTTATTTCCACACCCTGACCTCTTATATCTCTGCACCCCAATCCCTTATTTCCATGCCTGGACCTCGTATCTCTGTGCCCCGACCCCTTTCCCACTTTTCTGTAGGGTAAGAACCCCTGAACCCCTTCCCTCCGTGTCTCTACTCTCTCTTTTCTCTGGGCTTGCTTCCTACACTATGGGCAACCTTCCACCCTCCATTCCTCCTTCTTCTCCCTTAGCCTGTATTTTTAAGAACTTAAAACCTCTTCAACTCTCACCTGACCTAAAATCTAAGCATCTTATTTTCTTCTGCAATGCTGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCAGAAAACGGCACTTTCAATTTTTCCATCCTGTAAGATCTAAATAATTATTGCCGTAAAATAAGCAAACTGTCTGAGGTGCCTGACTTCCAGACATTCTTTTACACATCAGTCCCTTCCTAGTCTCTGTGCCCAAAGCAACTCGTCCCAAATCTTCCTCCTTTCCCTCCCGCCTGTCCCCTCAGTCCCAAACCCAAGCATTGCTGAGTCTTTCTAATCTTCCTTTTCTACAGACCCATCTGACCTCTCCCCTCCTCCCCAGGCTGCTCCTCGCCAGGCCAAGCTAAGTCCCAATTCTTCTTCCGCCTCCACTCCTCCACTCTATAATCCTTTTTTCACCTCCCCTCCTCACCCCGGGTCCGGCTTACAGTTTCATTTCATGACTAGCCCTCCCCAAGCTGCCCAGCAATTTGCTCTTAAACAGGTGCCTGGAGCTAAAGACATAGTCAAGGATAATGCTCCTTTTTCTTTATCCCAAATCAGATAGCATTTAGCCTCTTTTTCATCAAATATAAAAATCCAGCCCAGTTCATGGCTTGTTCAGCAGCAACCCTGAGACGCTTTGCAGCCCTAGACCCTAAAAAGTCAAAAGGCTGTCTTATTCTAAATATACATTTTATTTCCCAATCTACTCCCGACATTAAATAAAACTCCAAAAATTAAATTCTGGTCCTCAAACCCCACAACAGGATTTAATTAACCTCACCTTCAAGATGTACAATAATAGAAAAAAGTTGTAATTCCTTACCTCCACTCTGAGACAAATCCCAGCCACATCTCCAGCACACGAGAACTTCCAAACGCCTGAACCGCAGTGGCCAGGTGTTCCTCCAGAACATCTTCCCCCAGGAGCTTGCTACAAGTGTCAGAAATCTGGCCACCAGGCCAAGGAATGCCTGCAGCCCAGGATTCCTCCTAAGCCACGTCCCATCTGTGCGGAACCCCACTGGAAATCGGACTGTTCAACTCACCTGGCAGCTGCTCCCAGAGCCCCTGGAACTCTGGCCCAAGCTTCTCTGACTGACCCCTTCTCAGCTTAGTGGCTGAAGACTGACGCTGCCTAATTGCCTCGGAAGCCCCATAGACCATCATGGATGCCGAGCTTTAGGTAACTCTCACAGTGGAAGATAAGTCCGTCCCCTTCTTAAGCAATATGGAGGCTACCCACTCCACACTACTTTCTTTTCAAGGGCCTGTTTCCCTTGCCTCCATAACTGTTGTGGGTATTGACGGCCAGGCTTCTAAACCTCTTAAAACTCCCCAACTCTAGTGCCAACTTAGACAATACTCTTTTAAACACTCCTTTTTAGTTATCCCCACATGCCCAGTTCCCTTATTTGGCCAAGACACTTTAACTAAATTATCTGCTTCCCTGACTATTCCTGGGTACAGCCACACCTCATTGCCACGTTTTCCCCCAGTTCAAAGCCTCCTTCACATCCTCCTCTTGTATTACCCCACCTTAACCCACAAGTATAGGATACCTCTACTCCCTCCTTGGCGACCGATCATGCACCTCTTACCATCCCACTAAAACCTAATCACCCTTACCCCACTCAATGCCAATATCCCATCCCGCAGCATGCTTTAAAAAGGTTAAAGCCTGTTATCACTCGCCTGCTACAGCATGGCCTTTTAAAGCCTATAAACTCTCCCTACAATTCCCCCATTTTACCTGTTCTAAAACCAGACAAGCCTTACAAGTTAGTTCAGGATCTGCGCCCTATCAACCAAATTGTTTTGCCTATCCACCCCATGGTGCCAAACCCATATACTCTCCTATCCTCAATACCTCCCTCTACTACCCATTATTCTGTTCTGGATCTCAAACATGCTTTCTTTACTATTCCTTTGCACCCGTCATCCCAGCCTCTCTTCGCTTTCACTTGGACTGACCCTGACACCCATCAGGCTCAGCAAATTACCTGGGCTGTACTGCCACAAGCCTTCACAGACAGCCCCCATTACTTCAGTCAAGCCCAAATTTCATCCTCATCTGTTACCTATCTCAGCATAATTCTCATAAAAACACACGTGCTCTCCCTGCTGATCGTGTCTGATTAATCTCCCAAACCTCAATCCCTTACAAAAGAACAACTCCTTTCCTTCCTAGGCATGCTTAGTGCGGTCAGAATTCTTACACAAGAGCCAGGACTGCACCCTGTAGCCTTTCTGTCCAAACAACTTGACCTTACTGTTTTAGGCTGGCCATCATGTCTCTGTGCAGTGGCTGCTGCCACCCTAATACTTTTAGAGGCCCTAAAAATCACAAACTATGCTCAACTCACTCTCCACATTTCTCATAACTTCCAAAATCTATTTTCTTCCTCATACCTGATGCATATACTTTCTGGTGGCCCGGCTCCTTCAGCTGTACTCACTCTTTGTTAAGTCCCACAATTACCATCATTCCTGGCCCGGACTTCAGTCTAGCCTCCCACATTATTCCTGATACCACACCTGACCCCCATGACTGCATCTCTCTGATCCACCTGATGTTCACCCCATTTCCCCACATTTCCTTCTTTCCTGTTCCTCACCCTGATCACGCTTGATTTATTGATGGCAGTTCCACCAGGCCTAATCGCCACACACCAGGAAATGCAGGATAAGCTATAGTACAAGCCACTAGCCCACCTCTTAGAACCTCTCATTTCCTTTCCATCATGGAAATCTGTCCTCAAGGAAATAACTTCTCAGTGTTCCATCAGCTATTCTACTACTCCTCAGGGATTATTCAGGCCCCCTCCTTTCCCTACACATCAAGCTCAGGGATTTGCCCCCACCCAGGACTGGTAAATTAGCTTTACTCAACATGTTCCGAGTCAGATAACTAAAATACCTCTTGGTCTAGGCAGACACTTTCACTGGATAGGTACAGGCCTTTCCTACAGGGTCTGAGAAGGCCATCACAGTCATTTCTTCCCTTCTGTCAGACATAATTCCTCAGTTTAGCCTTCCCACCTCTATACAGTCTGATAACAGACCAGCTTTTATTAGTCAAATCAGCCAAGCAGTTTTTCAGGCTCTTAGTATTCAGTGAAACCTTTATATCCCTTACGGTCCTCCGTCTTCAGGAAAAGTAGAACGGACTAAAGGTCTTTTAAAAACACACCTCACCAAGCTCAGTCAGCAACTTAAAAAGGACTGGACAATACTTTTACCACTTTCCCTTCTCAGAAGTCAGACCTGTCCTCAGAATGTTACAAAATACAGCCCATTGGAGCTCCTGTATAGATGCTCCTTTTTATTAGGCCCCAGTCTCATTCCAGACACCAGACCAACTTAGACTGTGCCCCAGAAAAACTTGTCATCCCTACTATCTTCTGTCTAGTCATACTCCTATTCACTGTTCTCAACTACTCATACATGCCCTGCTCTTGTTTACACTGCCGGTTTACACTGTTTCTCCAAGCTATCACAACTGATATCTCCTGGTGCTATCCCCAAACTGCCACCCTTAACTCTTGAACTAAATAAATAATCTTTGCTGACAGGACTATGCTGAATCTCCTTAGGCACTCTCTAATCAGATGTCCTAGGTCCTCCCAATTCTTAGACCTTTTATACCTGTTTGTCTCCTTCTCTTATTCCATTTAGTTTTTCAATTCATACAAAACTGTATCCAGGCCATCACCAATAATTCTAAATGACAAATGTTCCTTCTAACAACCCCACAATATCACCCCTCACCACAAAATCTGCCTTCAGCTGAATCTCCCCCACTCTAGGTTCCCACGCCGCCCCTAATCCCGCTCGAAGCAGCCCTGAGAAACATCGTCCATTATCTCTCCATACCATCTCCAAAAATGTTCGCTGTCCCAACACTTTACCACTATTTCCTTTTATTTTTCTTATTAATATAAGAGGACAGGAATGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCACGTACACATCCAGATGGCCGGTTCCTGCCTTAACTGAGGCATTCCACCACAAAACAAGTGAAATTGGTCTGTTTCTGCCTTAACTGATGACATTGTCTTGTGAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAACCTCCCCCACTGAGTACCTTGTGACCCCACACTGCCCACCAGAGAACAACCCCCTTTTGACTGTAATTTTCCTTTACCTTCCCAAATCCTATAAAACGGCCCCACCCCTATCTCCCTTTCCTGACTCTCTTTTCAGACTCAGCCCGCCTGCACCCCGGTGAAATAAACAGCCATGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACGCGGACGCGCATGAAACTGGGGTCCTCATGCCCACCAGTCCAGAGTGCTCTCTAGAGGAAGGCTACAGACACTTCCTGGCTCGCTCATCCAGACGTTAGCTGTCTTGCTGAAATGCCTTTTTTCACCCTTGAAAACCACTGGAAGAATGGCCAAGAACCCAGCTATCCTGAGTAAGTTCACTTAGAGAAGCAAAATCTAACATGAGTCGCAAAATGGACACTGGCACCAGGAGTGTGGGTCAGAATCCTGCCCCTTGGAACTACATCATCGCTTGTACAGTGTACCCCCCAGGCACCAAGAGACCAGGCCGAGACCCTTCAGTGGCCCTGGGCCTCTGGTCAGTGTCTTCCTGCCTGGCACACAGGCAGGCCCTCATAAAGCAATGAGTAGTGAAAGTTCCAGCCTTCTTGATGGGTTCTCAGCACCCCGTCGTGAGCCACACCCTGCCCCAGGGAAATCAGGATCACCCTGATGCTACCCCTAGGCCAGTGCCCCTTCTGAAGTGCCCCAGGCTGGCACCTCTATACTTAGATCTCTTCAGCCTCCTCATGAAAACCTTGTCCATCACCCCAGCAGTCCTGACACTGTGCTAGATGAGCAGCTGACCACACGTCAAATCAATTTTCAGAGTTTGCCTTTGGTTTAATATTGACGGCTCATCCAAAAGACCTTGTCACTATAGCTAGATGAAAAAAATGACAAGGCTCTGGAGAAGCAGAGCCACAACATGGAAGATACCTGGGTCCCAGGTTCAGGAGGAGAGGAGCTGCCTGCTCCAGACTGTCACATGAGTGGGAATGAATCTTTTTCTACGTGTAGACCATTACCTTTCTTCACTCTGTCACATAGTCTATCCCCGCTAAACAGAAATTGACCTCCACCAGACCGTTTACATCAAGACCTGTATGTGCAGTGCAGTGGCCTGAGCCTCCAATCCATGCCCCACCTAGCCAACCGGCCTTGCCATATTCTTACTCTGAGAGTGGTATTCTGGGGACAGAAGCTCAGTGCATAGAATTGACTAATGCCAGATCCTTCAGGCGCTTTGCACTTTGAAGTCTATCTGTCCTAGCACATTCCAAGTACAAAGAAGACACTTCAGCAGTACAACCTGGCCTACACCCAGTTCAATTCCTTCTTCAAAAACCTAGGCCCGGCCAGGTGTTGTGGCTCACATCTGTAATCCCAAAACTTTAGGAGGCTGAGGCGGATGTATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAATTCCATCTCTACTAAAAATGCAAAAAATTAGCCGGGTGTGGTGGCACGCCCCTGTAATTCCAGCTACGCTGGAGGCTGAGGTGGGGGAATTGCTTGAACCCTGGAGGTGGAGGCTGCAGTGAGATGAGATTGTGCCACTGCACTCCAGCTGGGGAAACAGAGCAAAACCCCATCTTAAAAAACAACAACAACAACAACAAAGAAACCTAGGCCCACATCCAGACAATGGAATGTTATTTAGCACTAAAATGAAATGAGCTATCTAACCACAAAAAGGCATGGAGAAACCTTAAATGCATATTCCTAAGTGAACGAAGCCCATCTGAAAAGGCCGCACACTCTATGATTTCAACTATGACATTCTGGATAAAGCAAAACTATGGAGACAGTGAAAATATCCATGGTTGCCAGAGGTCAGCAGAAAGGAGGAATGAATTGGTGAAAGACAGAGGATTTTTAGGGCAGTGAAACTACTCTGCGTGATACTACAATGGTGGATCCACGTCATTGTCCATATGTCCAAACCCACGCAATGTACAACACCAAGAGTGAGCCCTCATGTAAACTATGGACTCTGGGTGATAGTGATGTGTCAATGTAGGTTTATTGATTATGACAAATATCCCACTCAGGTTTGATATTGCTAGTGGGGAAGCTGCGCATGTGTGTGTGTGTGGCAGGTGGGAGTAGAGGTTGATGAAAACTCTGTACTTTCTGCTCCATTTTTCTTTCTTTCTTTTCTTTTCTCTTTCTTTCCTTTTCCCTTCCTTCCTTTCTTCCTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCCTCCCTCCTTCCCTCCTTTCTTTCTTTCTCTCTCTCCTTTGTGTTTTTCTTTCTTTTTCACCCAGGCTGGAATACAGTGGTAAGATCTCAGCCCACTGCATCCTCCACCTCCCAGGTTCAAGCAATTCTCTTGCCTCAGCCTCCCAAGTAGCTAGGATTACAGGCATGCACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCATCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCTCAAAGTGCTGGGATTACACGTGTGAGCCACAGCAGCTGGCCTCTGCTCCATTTCTCTATGAACCTAGAACTTCTCTAACACATTAAGTCTATTTAAAAGGAAAAAAAAATCCCTATACCCAGGATAGCATTACCTTTGGGAGGAGAGGAGCTAGCGTAAGGGAGAGGAGAACGAGGAGCTCAGGCGAGATGGCCATGCCCTGTTCCTTGATCTGCATGGTGTGCATGTGTTTTACTTTGTGAAAGCTCACCCAGTTATCCACTTTGGATATGTAAACAAAAATGTTTAAGAAAACTTCACCTGCAGTTATCTGACCTACACTTTTAAACAATAAAGAAAGCCTAGGCACACAGAGCCTTGGGTAACTCATGGAGCAAGGGGGTGCGGAATGCCTTCTGTAGCCAGCCTCAGTCCCACGAGGATGGGCTGCTGGGTGACAGCAGGACAGGCTCATGAGGACCAGCCATCGCCCAAATGCTCTGGTCCTCCAGGCTGCCTGCCCATGTCTCAAGCTGTTTGGTCTACAGTGCCAAAAGGTCAAGAAGAAGGACAGTTAGAACAACCCCATGGTTTCAGCAACATGGAGGCCCTCAAGAACCATTTTGAAACCATATGGAATGGGGTGTGGGACAGAAGCATGTTTGGAAAAGGTTGAAAAGTGAGTGGAGGGGCCAGGTGTTGTGGCTCACACTTGTAATCCCAGCACTTTGGAAGGCTGAGGCAGGCAGATCACCTGAGATCGAGAGTTCAAGACCAGCCTGACTAACATGGAAAACCCCCGTCTCTGCTAAAAATACAAAATTAGCCGGGCGTGGTGGCAGGTGCTTGTAATCCCAGTTACTCAGGAGGCTGAAGCAGCTGAATGACTTGAATCTGGGAGGCAGGGTTTGCAGTGAGCTGAGACTGCGCCATTGCATGGCAGCCTGGGCAACAAGAGATAATCTCCACCTCAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAAAAGAAAAAAGAAAAGTGAGTGGGAGGTAAGAAAGTCAAAGATGGTCCATGTAGTAGGCAGAATAACTGCCCCCAAAGATGTCCACAGGCCTTAATCCCCAGGCAGTGATTATGTTACCAGACATTCATGGTAAAAGGGACTTGGCAGATGTGATTAAGTTCAGGATTTTGAGTAGGGGAGATTATCCTGGATTATCTGGTAGGGGTTTATATAATCACAAGGGTGCTTAAAAGGAAGAAGGTGGCTGAGTGCAGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACCTGATGTCAGAAGTTCGAGACCAGCCTGGCCAACATGGTGAAATCCCATCTCTACTAAAAATATGAAAATTAGCCAGGCATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAGTGAACCGAGATTGCACCATTGCACTCCAGCCTGGGCAACAAGAGAAAAACTCCATCTCAAAAAAAAAGGAGGAAGGCAAGAGAGTCAGAGTCAGACAGTCAGAAAAAGGAGTTGTGACAACAGAACCAGCAGTTGGAACGATGAAGCCATGAGTCCAAGAATGTAGGCAGTCTTTAGAAACGGGAAAAGGCAAGGAAAAAGATTTTGCCTTGAAACCTCCAAAAGGAATGCAGCCATGCAGAAATCTTCATTGCAAACATCTGACTACTAGAACTGTAAGAGAATAAATGTGTGCTGTTTTAAGCCACTGAGTTTGTGGCAACTTGTTACAGAAGCAATAGGAATACTAGTACAGTTTGTATAGATGACTGTGGCAACAGTGTGGTGAAGATGAGAGAAACAGAGCTGTGCCAGGCGCAGTGGCTCACGCCTGTAATCCCAAAACTTTGGGAGGCTGAGGTGGGCAGATCATGAGGTCAGGAGATCGAGACCATACTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGACACTGGGAGGCTGCTGCAGGAGAATGGCGTGAACCTGGAAGGTGGAGTTGCAGTGAGCTGAGATCACACTATTGCACTCCAGCCTGGGCGAAAGAGCAAGACTCCATCTCAAAAAAAAAAGAGAGAAACATAGCTGTAAGAAGTGATGTTCAGGGAGAGATTTTTAAATAATTATGATTGAGTTAAAGTTGAAAGAGGCTTGTGTGTATATGTATGTGTATAGATAAACACGTATGCAGATGACCCTTAGATCATAAGTATTCGATTTCTATTTTTTTTTCCCCCGAGACGGAGTCTCCCTTTGTCACCCAGGCTGGAGTACTGTGGCGCAATTTCGGTTGACTGCAACCTCCACCTTCCTGGTTCAAGCAGTTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGCCCGCGCCATGCCCGGCTAATTTTTGTTTTTGGCCAGGCTGGTCTGGAACCCCTGACCTCAAATGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAAGTGTGAGCCACTGCGCCAGGCTCATATGTATTAGATTTCTTATTGTGGGTTTTGGTCCGACAAGTTTGAAGGGGGATATTGTCGAGAGATTGCTCAAAATGATGAACCGCGGGCTCCAAGCTAATTATAAGAAAGGAAATGAGCATAGAAGAGGCGAGGGGCCCAAGGGATCAGAGATCCTGATGAGGACCAGCAAGGTCAGAGTGAGGGAATCACACAGCAGGCTGGAAAGGCAGGAGGCTGTGCCCACGATTTGTTTGAGGAATGATTTCAAGGTGGATTTGCAGGTTATGGAAACGTCCAGGAGTGGCCATGGAAAGAGGTAGAAGAGGTTGGTGCAGAAGGTTGCTGGAAACAAGGATGCCAGGACTGAGAGTGAAGATGCCCTGTGGACCAGGCATCTCCCAGGATGAAGGTAGGAAGTGGGGTGGAGCAGGAGCCAGCTGCCAATGTTGTCCTTAAACAAAAGGCAGTTGACAGATGAGCTGCTCCCAATCTCATGCCCTTTTGGGCATGCTCCTTTCCCGGTAGGCAAGCTCATGCATTCCAGTGTGCTGGGCACAGTCAGGCCACTGAACTTCCCACACCTTGGTTTCTTGGCTGGTTGAAGAGAGATCCTTTTTAAAGAACAACTACTAATGCAGCTGTTTATTAATGATTCCCTCCGGGTCAAATTAGCCATCATGTTGGATCAGTCAAAACTACTTTATTTCTTAATAATTTCAGCCAGAACTTGTACAGTCTAACTCTATTTGTGGGCAAGTATTTGCTATCCTGGAAGACGGCAGTTGTGCACACTCTGTTAAGAAATCAGTCCTGGAATCCAGTAGAGCCTGGAGATGTTCTGTTGATCCTTGTTAAACTGGTGAGGAGAGGAAATGGGAGGGTGTAGATTCTTTTCTTTTTTTCCTATCACCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACCGCAACTTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCGGCCGCCCGAGTGGCTGGGACTACAGGCGCGTGCCAGCATGCCTGGCCATTTTTTTTTATTTTTAGCGGAGACAGGGTTTCACCATATTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCTTCTGCCTCAGCTTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACATGACCAGCTGGATGTAGACTCTTTTTTATCAGCTTCACATCACTCAGGGATCTTGGTACAGCTCATGTGTAACTCCAAGATACTCTTCCCTGTTGAATCCTCCCACTGTGTATCAGCAGAAACTCTTACAGCTACTGCCATGGCTAAAACCTTCCTCAAAGGAGTATCCTGAAAGGCTTGGGTAGAGCAAATCTTAGAAAAGCTTAGACCAAAGTTCTTAGGTTTCCATTTTTTGAATACAGATGAGGAGTTCACGACATGAACCCCTAAGAATGGAGGGAGCTCTCCTCTGTCTTCCGAAAGACACAGGGAAATCCTTCTTGGGATTGTCATCCTCATCACATTTACAATGAAAATCCATTAATATTCAAATAATCCAGTGACTATAGAAAGACCAGTGTGGGAGGAAAATAAATCTTGGGGCCCCATACTTACTAAGCCAAAGGGAACAGTCAAGCTGGGAACTGAGTCATGCAAACCTGCGTCCCATTTTGTTCCTAACTAAGATGGCTACAAAGATAAAAAGCTACATACATCGCTCACCTTTTGCCCACAAGGAGATTCCTTGCAGGCCCCAAGATCTTTATTGAAAACAGTTCTGTTGAATTTCACCCAGGCAATATCAACTGATAGCTTATCCACAGATGCAGGACGGGACAGGACAGAACTCAAAGTCATCCTTCTGCTTGCCTGAGAGCAATCAGAAATGTATATCTGATTTCTGATTGCTTCCTCTGCCCTATTGTTTACATTGTCTTATGTAATATTGCAGATTCCCTTAGCCAGACGAAGTGACAGCATGAATGACTATTTCCTCTACTCACTCTCATATGAAACTTGTATATTCCCCCAATATCCATCCTTTCCCCTTTAAATATTGAAGCCCTTAAAATTATCTTTGGAGAAAGGCATTGACCTGTCTCCCTGGTGGGTGTCCTTAACTTTGGCAAATAAACCCCTTAAAATGATTACAACTTGCCGCGGTCATTTTCATTGATTTATACCAGAATGAGGTAAATAACTGATTTTCAAAGAATCGTGATATGAGTCCCAAAGTGTTCTACGGGAGTGTGATATTGTGAAATATATATTTGATCTTTCACATGTTTCCTTCCATACAACTCCTAAAACCCTTAGAATCTCCAAAGTGATGTGTTTTGGTATGCTAATAAGTTGACTGATGGCTGGCAGCCCCTAGCTAGCTTCAGAATGGGGGCTAGTCCCTGGAAAGACCAAGGCAAGATTAGAGAGTTGGGACTTTGAGCCTAACCCCAACTTCTAGGGAGAGGAGAGGAACTGAAGGTTATATTGATCACTAATGGCCAGTGATTTAATCAATTGTGCCTAGGTAATGATGCTTCTATAAAAATCCAAAAGAATTGGGTTTGGAGAGCTTCTGTATAGCAGAACATGTACACGTTTCTGGAGGGCAGGGCACCCAAGGTGGGCATAGAAGCTCCACACTCCTTCCCCATCCCTTTCCCTGTGTGTCTCTTCATCTGTATCCTTTGTAATAGCCTTTATAATGAACTGATAAACATAAGTAATCTTCCCTAAAGTTTTTCTATGAACCACTCCATATTGATGGAACCCAAGGAGGGGGTTATGGGAAGCTCAACTTGAAGCTGGTTGTTCAAAAGTTCTGGAGGCCCAGATTGTGACTGCTGGGAGGAAGGGCAATAGTCTTGGGGACCGAGCCCTCAATCTGTGGGATATGATGCTATCTCCAGGTAGATGGTGTCAGAATTGAATTGGAGTATAGCCAGCTGGTATTTGCTGCAGAATTGATTGTTTGCTTGTTGGTGGGGAGGAATCCCCAAACATTTGGTCACAAAAATATTCTGTGTTGATTGTTGTTGAGTGAAAGAATAGAGAAAGTATTTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTTTACACAACTGGTGTCAGAAGTGGGATTTTCTGGCCGTGGCCGTGGCTCATAGAAACATGTGCTTTGGGAAGAGAAAGAATGAGAGGGGCCGGGCACAGTGGCTCATGCCTGTAATCCCAGAACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAACAGATCAAGACCATCCTGGTTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTAGTGGCGTGCGCCTGTAGTCCCAGCTACCTGGGAGGCTGAGGTAGGAGAATGATGTGAACCTGAGAGGCGGAGCGTGCAGTGAGCCGAGATTTTGCCACTGCACTCCAGCCTGGGTGACAGAGCCAGACTCTGTCTCAAAAAAAAAAGAATGAGAGGATGGAGGATAAGGGACCTTTGATTCCTGGATGGTCACATGGTCACCCATGGTATGAAGTCACAGCTGTGCTGCACTCAGTTATTAAAGGTGAAAGTTACCACTGGAATTTGGAGATAGATCCAACTCTTGGGAAGTTGGTTCACTGGATGTGCAAGGAAATGCAAACTAATAACAAAGAAGTGAAATATTCACTCCTTTGCTTATTGTTATCTGTAATAGCTAAAATAAAAATAAAGGAGAGCGCTAGGTCCAGCCTCAATGCTACACCAACCTTAGATGTCAGTGAGTCTGAGCTTTGGCCACTAGCTTTGGAGCCATTCTCTAAGGGCAAAATTATGCGGAAACAACAGAAAATGCCTCTGAGACCTGTGGTTACTAAGAAGGTAGTGAATTTCGGGGAAGGGCAAAATTAAGTAACTACTGAAACGAAGGGGTAGAGTGTGAAGGAACTGTTTTATTTTGTGGTTCAGTATCTTCAACTCCCTAAGGGACCTTTACTAAAATGGACTGTGAGAGTAACTAATTTAGGGGCAGTATCTTTGGTTTTACATGCTGCAGAGGGGAGGAGCATGTTTGGGTTGATGCAGGATCCACAGCTCACTATGGAACAACCTCAGATGGCTATATACGATCTGGACATACAGCAGGCTATTCCTGAGGCAACAGCCAGCCTAGTAGACTGGATAAAAGCCTCCATAATGTGTGTTTACCCTGAGAAGGGGGACTGTCCAACTCCATCTATAAATGCCAAGTGGAGCGCTCCAGATGAAGCAGCTGACATGCTTTGTATGCAAGCCACATGGGACTGGCTTTATGGTGACTGGGATATCCACCCACTACATTGCCTGTTACCCAGGTCATGGGAAATGCTGTGATTAAGGGGCCCCATTTGCATGGACACCTCATGCAATCTCACTGCTGCAAAATCAAGCTATGTTTGGAGAAGACTTATTGAATTTGCTATCTCAGCTTCCCCTCATGGGTCTTATAGATGCTAATAAAAGACATTAGGGCAATTAATAAAATAATGTGGAAAAGCAGAGGACAGAGTCAAAGGACTCATCCCATGAAGGTGGATGTATTTAAGCAGTTATTAAGAGATAAAGAAATTAAAGAAAACATTAATAAATCTAAAACTAAGAGGAAAAAGGGAAGTGCCATGGGACTCATCGCAGGAGGCTGAAAACCCTTAGTGGTGCTTAAGAAATGAGACGAATAGAATGGAAATTGATGGGGTGAAAACAAAGGTCTTAATACAACACTATTGAAGGTTGGGTGGACCAAAAAGAGCCCTTGCTGGCTGCCAACATTAAGGAGTTCCAAATGGGTTTGCTGTATTCACCTTAGTTTGGAGAAATTTTAAAAGTCATTAAGCAGAGATTACAATGAGAAAGCTGATCAGCAATCACCTGGGCCAATGTTGAGGCAGGTTCATCCAGATAAAGATTGACAAAAGGGCCAAGGCTCCTTGGCTCAACCCTCTGCTGGCGACTCAAAGCCTTTTGCACTGGCTGGTGGAGAAGAGAAGCTCCTGGATCTAGAACTTAAAAATGTAAGGGTTGGTAGAATTATGAAAGTTGGTGCATTTGAACATGCTTCATATGAAATGTTTACATCTCTTTTACCTGATTGTATTAGGGAATGGACTTTGTATCTGACTTGTCCTTCAAGCAATATTAATGGGACGTGAGATGGGAGCCAGTAAGATTGCCCCCAGCCCGCAAAGTGCAGAGTGGAAGATGCTGAGCTGGGAGGGACATATTCTTTCGATAACCCCTCTATGGAGCCTCTAAAGCAGCATATGGCAAAAGCCTGTCACCGTCTCCCAGCGACAACTCCTGGCCCATAAAATGATCTTGACACCTGAAATACCCATGCTGTCTCAGGTGATGTCATAGAAACACTCTAATGAGGCTGGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGATCAAGAGTTCGAGACCAGCCTGACCAACATGGTGAAATTCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGTGGATGCCTGTAATCCCAGCTACCTGGGAGGTTGAGGGAGGAGAATAGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCACACCATTGCACTCCAGCCTGGGCGACAAGAGCAAGACTCCATTTCAGAAAAAAAAAAAAAAAAAAGAAACATAATAAAACGGAAATGGTTTATACAGCATCATGCTCTGTGGGGAATGCAGGGAGGAGATATTCCCAAGGAGGGAGCCTCTTTTCTCCTACAACTGACTCTGGAACAGTGAGGAGCTGCTGGATTCTCTCAACAGTTCGACAATGCCCTATATAACCAGCTCTCAACTCACTCACCCCCAGCTGTTTGGTCTATGGATGACAATTTTGAGGTGAACAAACAACATCCTGTTTGGAGGGCTGCTACTCTGGCTAAAGACTGTAAAAATCAGTCAGCTCAGTGAGTTGAATTGCATGCTGTTTTCCTAGCTGCTGATCTATACTAGAATGATGTCAATAACTGATTTTCAAAGAATCATGGTACATGTTCCAAAGTGTTCTACAGGAGTGTGATATTGTGAAATATATATTTGATCAGTTGAACAGTGGTAGCAGCCCCGTGTTTGGGTTTTTACTGACTCCTGGGCAGTGACCAGTGTCTTGGCTGTACACTCAGGCAAGAGGGCAATAGCTACCTGGCTTATTAACGGGACATCCATGTGGGGCAGAGCCCTGTGGAGATGTGAAAGATGTCTTGAAGTAGAACAGGTTCATGCCCATCAGAAAAACTCCCTTCCAGGCTCAGGAGATGGCTGGAGTCACCAAGTGAGTTTTTTTTGTGTGCTCCTGTGAGGTGGTCGCCTGGGTCCATGAAATGAGTGAACAAGGCGGTTCTGCAGCAGTGCAGAGATGGGCTGAATCTAGCCATGACCCTCGGGCTCAAAATGCCAATAACTATTCTGTCGCTGGTTGCGCTGGCTCAAGCCTGTAGTTCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACCTGAGGTTGGGAGTTGGAGACCAGCCTGACCAACATGGAGAAACCCCATCTCTACTAAAAATACAAAATTACTGAGGCGTGGTGGTGCATGCCTATAATCTCAGCTGAGGCAGGAGAATTGCTTGTACCCAGGAGGTGGAGGTTGCGGTGAGCCGAAATGACGCCACTGGACTCCGGCCTGGGCAACAAGAGTGGAACAACGTCTCAAAAAAATAAAAATAAAAAACAAAAAAAACTGTTTTGTCTCCCAGCAAGAGAAAAGAGACTGCCCATGGCTGTGAGGCACATTCCCTTGTGGGAAAGCTCTTAACATAACTGGCAAATGAGTTGGATGCTGGCAGCCCTGGGGTTCTACATCTAGGTCTTGACAGGAATAGACACTGTCTCTGGACTGGGCTTTGTTTGCATGGTAGAAGATGCAAACACTCAGAGTGCCACTAAAAAAAAAAAAAAAAAAAGGCCAGGCACGGTGGCTCATACCTGTAATCTCAATACTTTGGGAGGCTGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCAATACCAGCCTGGCAAACATGGTGACACCTCATCACTACAAAAATACAAAAAAAATTAGCCAATCCCAGCTACTCGGGAGGCTGAGGTGGAAGAATCACCTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCGTGCCTTTGCACTCCAGCCTGGGAGACAGAGGGAGACTCTGTCTCAAAAAAAAAAAAAGGAAAAGAAAAAAAAAAAAAGAAAAGGAAAAAAAAAAACCAGAACAGGAGATACTGCATGAATCTTGATGGCCAACGTCATTGCTTCAGAAAAAGGAGCACTCTGTACAGCCCATAATGTCCAACAATGGGCAGAGAGGCATCCTCTTCAGAGTCATAATTTGGCACAGAAGTGGAAGAGGCAATTCAAACACTGATTGTCTAAAACGGGGGAGGTGAAAGCAGGAGGGCTGGTGATAGAGTTTGGAACTGTATCTCCACCCAATTGTGTGTTGAACTGTAATCCCCAGTGTTGGAGCTGGGGCCTGGTGGGAGGCAATTGGATCATGAGGGCAGGTTTCCCATGAATGGTTTAGCACTATTCTCTTTGGTATTGTACTCAGGATAGTGAGTGGGTTCTCATGAGATCTGGTCGTTAAAAAGTGTGTGGGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGAAAGGCTGAGGTGGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCAAAACCCCGTCTCTCGTAAAAATACAAAAAGTAGCCAGCGTGGCGGCGGGCGCCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCACTTGAGCTCAGGAGGCAGAGGATGCAGTGAGCTGAGATCACACCATTGCATTCCAGCTTTGATGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAGTGCACGGCACCTCCCCCAGTCATTATCTCTGGCTCCTGCTCCTGCCATGTAAGAGGACTGCTCCTCATTCATCTTCTGCCATGATTGGAAGCTTCCTGAGACCTCACCAGAAGCAGAAGTTGCTATGCCTCCCATACAGTCTGCAGAAGAGTGAGCCAATTCAACCTCTTTCCTTATAAATTACCCAATCCCATTGCTTCTCAGCCTTTTGGCTAAGATCAAGTATAAATTACCTAGTCTCAGATATTTCTTTATAGCAATGCAAGAATGAACTAATATAGCTGGCTTGCACGCTTTGTGAGTGTGCACTCATACTTAGCATGAGTGGTCTAAAGGAGTGGCCTTCCAGATTTTTCTCCATTTTTTTGGTTGATCTGGGGAAGGGGGGGGTGGGGAGGATGCTGACATGACCATGCAATTTTTTTTTTTTCCCGAGATGGAGTCTTGCTCTGTCACCCTGGCTGGAGTGCAGTGGCGCAATCTCAGCTCACTGCAACTTCTGCCTCCCGGGTTCAAGCAATTCTCCTATCTCAGCCTCCAGAGTAGCTGGGATTACAGGCACATGCCATCAGTCCCAGCTAATTTTTGTATTTTTAGTAGAGGTGGGGTTTCACCATGTTGGCCAGGTTGGTCTCAAACTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAACCACCGCACCCAGCCCAATGAACAGTTCTTGAATGAATGACACAATGAAGAACACTACCAGAACAAGAGCAGATCAAAGGTGAATAAGTGAGTAGTAGCTTCTATTAATCCTCATCAGCAACCAACATAACCCAGGGCTTATAGATTTCTCTATGTAATATGCTACACACACGTCTATGGAAAGAGAGAGAGAGAGAAGCACATCAGTCAACCAATTTTAAAAAGTTACTCTAAATGTGTTGGTCTTGTATTACAATCTTTAGATTACACTATTATTTTATTTCAAACAGGACTGGTAGAAACTTCTTCATGCCTTTTCAACCAAAGAACTTCAATACGGTGAAACCCCTAAAAATACAAAAAATTAGCCAGGTGTGGTGGCGGGCGCCGGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATGGCATGAACCCGGGAGGCGCAGCTTGCAGTGAGCCGAAATTGCGCCACTGCACTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCACACTTTGTTCTTTGATAAAGTACCAACCTTAGAAAGTTACGCAGCGAACACCATCTGACTTAGATTAACTGAAAAGTAACTGGATCAATCCCCCTTTACCCTAAGCATCTAAAGGGAACAATTTTCTTTTCTTTTCTTAGGGATGCAGCGTCCCTCAAACTGCAGAGCCACTTGGCGATGAAGCCAGGATCGCAGTGCATTTGATAACTTAATGCAAATTTTTACTAGCACTTAAAACTCAGATATGAAATCTATACTTGATCTTTTCTGCTTGGAATTGGTCAGATTAGTGGTTCTGCCCCGGCATACAACAAAAGGCTCTCAGAAACACTCATGGTCGCTAACCAATCAGAAGGACCAACAGAGCTCGACAAACAGACAGGAGGGTGGAAGGGCACCGCCTTCCACCCCACCCGCTTAGACAGCCTTTCAACTCTGCCCACTTTGAGGATCTGTAGGATGATCCAGGTAAGCATGATACCTATCTTAACTTCAAGGTAGAAATTAAGGCTTGAGTGCACTTATTTGGTGCCTTATTCATTTAATTGGAAGATTATATGGTAATTTCACTGCTCATAATAATTAAACCTTTTTTTTCACTTTGGGGATGATAATGACATTTGGAGAGTAGCACTATAAACCTCAAAAATCTATTTTGAAGATGACTGGACTTAAGAGCGGGACAGGTTTGCTGTACACTTGAGCGAACATGCTTTGTTCCCCAAAGCAGCAAAAAAGCCAGAGCCTGGAAGTTTCTAAAACTTGAAGCAGATGCAAGTGGCAGATCCAAAAAGCTGTGCCTAGAGAACAGATCGGTTGACCGGCTGTATCTATTCCATCCTCCCCAGTGACTCAGTGGAGGATTTCGGACAGGTCTCTCAGTTTCCCCTTCTTTGGTTTCACCTTAGAGTGAGGGGAAGTCACAGCATTTCTTCCTTTATATTTCACAGAAACACAGGAGGCTGGATTGACAGTCAGCAAATGTAAAGAAATACAGACGCCCACAGGGCAATTATGCTGGCCTGGCCTCAAGCTTCATATTCATCCTTAACTGATTCCCTGGCACACTCGCCAGTGACCTGGCTCCACTTCACCGAATGGACCCAAGGGCCCACACTTTCTTAATTCTCCTGTAGACCCTTTATTCACTCCCCTTCATCCTTCCTTTGCTGACGGTGGTCGCTTCTGACTGCCCCAATCTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGTAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCTGTGGTGAGATCTCAGCTCACTGAAACCTCCGCCTCCCCAGTTCAAGCGATTCTCCTGCCATGGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCACGCCTGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGAGTTTCACCATGTTGGCCAGGCTGGTCTCTAACTCCCGACCTCAGATGATCCACCTGCCTGGCCTCCCAAAGTGCTGGGATTAGAGGCATGAGCTACCGAGCCTGGCCTCAATCTTATGCTTACTATTCTTCATCTGTTGTCTCATTTTATAGCCAGAGCTCAGGTGACAGCTGAGGGATTACATTCATCTGTCTCTGAGCCTCTGAGACTTCTATTTTCTTCACCACCCTCCAGGAATCCTTTTTTCTAGCTCTTGGGTGCTGGCCATCTCCTGGAAGGTTAAGTTGAAAATCTGACCTCCAGTTCATTGGTGCCTCTACAATCAATCCGCATTACCTGCAGATTCTGTAGCTGCAAATTCACCTACTTGATAATGTTTACTTTTAGCCCCTAAATCAATCCCAGCGGGGCTTTTCTGGATGTGCGCCGGGTGGTGAAGAGGTTGAATGGCTGATAAGCACGGTCCCAGCAGAGATCCATCGAGGAACCTCTGCCTTTTGGTTTCCGCTCTTATACCATAAATGAATGCCCTTTTCTTGGTCTTTTTGGGGTTTTTGTTTGAGACAGTCTCACTCTGTCACCCAAGCTGGAGTGCAGTGGTGTGATTGCAACCTCTGCCTCTCAGATTACAGTGATTCTCCTGCCCCAGCCTCCCGAGTAGCTGGGACTACAGGCATGTGCCACCACACACAGCTAATTTTTGTTTTTTAGTAGAGATGGGGTTTCGCCATATTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGATGATCCACCTGCCCTGGCCTCTCAAAGTGCTGGGACTACAGGTGTGAGCCACAATGCCCAGTCTGGGTTCTCTTAAATGTAATGGAAAGAGGAGAATTGGAATGGCCGAGAGAGAGAACTAGGACCCTGCATGAATGAATCAAGTTGACTTGGAGAGAAACTGTATTTATAGGAAAGTCAAAGCTCTGAGTTTGGAGGCCAAGCAGGGTGGGGGTGAGCAAAGCTGTGGGAAGGAAAGCAGGGCTTCAAAAAACAGCTGCTCCTTCTTGATAGATGCAGGGAGGAAACAGGAAAGACCGGGGGCCATGTGGTGTTATTTGTAGCACTTGAATAGCTTGGCTCTTAGAGTCCCAAGGCCTCCAGCTAGTGATCCGCAGATGCCATTAGAGGGCAAAAGTGCTCGCTGCTCTCTCATTTGTCAACAAGAAGAGCTGGTATGGCCCTGGCCTTAAGGATAAGTTAGTCAATTGCTTATTGTACGTCACGAGATGAATGCTGGGAGAGAGGAAACACAGGGTGTGTAGGGAGAGGGCAAAAACGGCTACATCTGACCCACCCCAGAGATGAGGAAGGCTTCCAGGTGGGAGGTGACACCAGGAGGTAACCAGGTGGAAATCACCCTCAAGTAGCAGAGACAGGTGTGCAAAGGCTCAGAGGGAGCTTCTCCAGGATCAGCAGAGCTCGATTGTAGGGTGTGAGGCTGTCACAGAGGCTGGAGAAATAAGCAGTTCCTTGCTAAGAAGTCTGAATTTTAACCTGAAGGGACATGGGAGCTACTGCAGGCTGGTAAGCAGGGGGGTGGTGCTGGTTGGATTGCAATGCAGAGAAACCCTGGGTTGGCCTGCGTCTGATAGACTGGAGAGACCCTTGAAGAAATCAGGGTACAGGCAGTCCTCCGGAGTAGAAATGAGGAAGGTGCCAACTGAGACCACAGCAGTGGGGAAGAGTGTGAGAGGGATGGAAATTGAGATGAATTCATGGGTGTTTGGCCTGTGTAGTCACACAGGGTCCCGAGCTGAGAGGGACCCCGAGCTTGGCTTAATGCTCTGCTGTCACTGTCTTAAAATTCCTCCTCATTTTATGTGTGAATCTATGTTTTGTTTTGTTTTGAGAAAGAGTCTCTGTCGCCCAGGCTGGAGTGCACTGGCACCATCTCGGCTTACTGCGACCTCCACCTCCCAGACTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGCCACCTGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGAGTGGGTTTCACCATATTGGCCAGGCTGGTCTTGAACTCCTGATCTCAAGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGAGATTACAGGCATGAGCCCCTGCAGCCAGTCTGAATCTATGTTTTATCAGTGAAATCCAATGGGGCAATAGAACACGTGCGTGGGCAGACGAGACACCAACAATATGAGTTACCCCCGTCCCTTGCCACCGCACTCCCCATGGCGTGTCTGCTGTGCCCTGAGCATAGAATCTTGGGGGGTCCGCAGTGCATGGGAGCCCAGCAAGGCTCCAAGTGAGCATAAGGGAAGCCTACTATGTCCACAACGGAGTCTGCAAGAGATGCTGACAGCACCAAGAGGTTGCACTTTCTCTTATTATAGAATCAGAATTGAAAACCAAGTCAATGGCATTCTAAGAAACAGGAACAAACAAGGAACCCTCTCCCAGCCTTTTCTACTCATCTGATTCCCTGTAGTAACCAACCACTTCCACTGGAACTGATGACATAGGAGAGGCAAAGATAGCAGAGTCATAGTTGTTTTTCCTTTCAATTCTTCCTTATGCATCAGTAAGCCAAAGGTAGAGAGTGGTGGTAGATTGTATAGGTGTGAAAAAGTGAAATAAAAACAGCTGAATGGCCAGGTGTGGTGCTTCATGTCTGTAATCCCAGCATTTTGGGGGGCCGAGGTGGGTGGATCACAAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCTATTAAAAATACAAAAATTAGGCCGGTGTGGTGGCAGGCTCCTGTAATCCCAGCTACTCAGGAGGCTAAGGCAGGAGAATGGTCTGAACCCGGGAGGCAGAGGTTGCAGTGAGCTGAGATCTCACCCTGCACTCCAGCCTGGGCAAGAGAGCAAGACTCTGTCTCGGGAAAAAAACAAAAACAAACAAACAAACAAAAACAGATGAATTAGTTTCCTGCAACGTCTCACTGTTTCTGTGAGGCAAAAAAATGCCACATACAAAGTACAAATTACGTCATTTCTGTGATTCCACATTTGAGTCCAGTGTTCCTATTTAAATCTGGCATTGCACAATGTAAAGAGGAACAGTATAATCCATGCTAGTAATTTAAAATGTTAACTTTTTTTTTACTTGGAAGGACATTAAATAACAAATGAAAGCATCATGATAAATTGAGACACAGACACCACAGAAGAAAGAAAATGCTTTATATGTTAATACTTCAGCAGTGCTTTTTCCTCTGATTTTTGAATAAGGGGGCCCATGTTTTCATCTTGCACTGGGCCTTGCAAATTCTGCAGCTGCTCCTGACTGTAAAGAGGGGATTTAGCCATAAAATCAGCAAGGGTTGGTCGTGGGGATGTGGGGTACAGGAAGATAGAGGATTTAGGCATGGCTGCAGGGTTTTAAGCTGGTGGTACTGTTGGCTGGGAAATCTAGGAAATCCAGCATTGAAGGACCGGCTTTGTGAATCTGTTGTGGATGGGCTGAGCCTGCAGTGGCCATGGGGCATCCTGCCTGGGAGGAGGGCGAGCAGCAATTCATCAGCACAGATGGTGACTGAGGCTCAGGAGGGGCTACTGAGGTAGGAACTGTGGGCAGGGATGCTGGGGAAGCAGACATTGAGGAGATGGGACAACAGCTGGGTATGGTGGCTCACACCTGTAATCCCAGCTACTCAGGCTGAGACAGTAGGATAGCTCGAGGCCAGGAGTTCAAGATCAGTCTGCACAACATAGCGAGACCCCATTTCCCCCCCTCAAAAAAAATTAATAAAAAGTAAAAATGCAAAGAAGAGATGGGACAGCAAAGAAGGCCTCATAAAGGAGATGGAGAGGAAGGAGACAGGAGGAAAGGGGAGAGGGAAGGTGACAGCCAGAAGCAGGCATGAGAGGTTCCCTAGAGTGGGGTTTTATTATCTCAAGTGACCATGAGCAAATTACTGAACCTCTCTGTGCTGCAGACATCATGGATAAAAAGAAGCTAAAATGAAGACAATAACAGCAGCACTTATGGGCGGGGCGGTAGTGGTGAAGATTAAATGAAGAGTTTATACGGGAAGGGCTCAGAATGCTGCTGTATTAAATGCCTCAGTCTGCTATAAAAAGATACCACAAGCTGGATGGCTTAGAACTACAGAAATGCATCGTCTTACACCTGCAGGCCAGAGGGCTGAGATGAAGGGATTGTCAGGGCCAGGCTCCCTCTGAGGATGCTAGGGGAAGGATCTCCCTCCCAGCTTCTGCCAACTCCTTATCTTGTGGAGCAGAAGTCCAGTCTTCACGTGGTCTTCTCCCTGTGTGCATCTGTGTCCAAAATTTCCCCTTTCCATATATCTATGTCTATATCTACACACAAAAATACACATATATGTAGTGTGTGTGTGTATATATATAGAGATATATATAATTTTATTTATTTATTTATTTATTTATTTTGAGACAGAATCCTGCTCTGTCACCCTGGCTGGAGTGCGGTGGTGCAATCTTGGCTCACTGTCACTTCCGCCTCCCGGGTTCAAGCAATTGTCCTACCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACTGTGCCCAACTAATTTTTTTGTATTTTTAGTAGAGACAGGTTTCACCATGTTGGCCAGGCTGGTCTTGATCTCCTGACCTCAAGTGATCCACTCGCCTCGGCCTCCCAAACTGCCAAGATTACAGACGTGAGCCACCGCACCTGGCCTCTTTTATTATTTTTTAATAGAGATGGGGGTCTTGCTATGTTGGCCAGGTTGGTCTTGAACCTTGGCCTCAAGTGATCCTCCTGCCTCAGCCTCCCAAAGTGCTAGGATTACAGGCATGAGTCACTGTGCCTGGCGTATTTTATTTATAATCTTTTTAATAGAGATAGGAGTCTCCCTATGTCTGCCAGGTTGGTCTTGAAACTTGGCCTCAAGTGATCCTCTTGCCTCAGCCTCCCAAAGTGCTAGGGTTACAGGCATGAGCCACTGCACCTGGCCAATTTCCCCTTTCCATAAGGACACGCATTATACTGGATAAAGCCCACTCTATCAACCTGATTTTAACTTGACTACCTTTGTAATGACTATCTCCAAATATGTCACATTTTGAGGTACTGGGGGTCAGGACTCCAAGAAGTCTTTTGTGGGAGAGGGGATGCAATTCAACCCACAACAGTGCCCTGCTCTGTGAAATGTTCACCTTTATGAATAAGACGACCTCCACGAGTTGTTTTCTTCAAAGGTATGAGGCAGAGACCAGTGAGGGGCAACCTGAGGGTGGGGAACCTAAATTTGCTGTGGCCACAATCTCCGCAAAAACGCAATGTTTCTCCCGCAGCACTTAGCAGCCCAGGTGAAGGTAAATACAAGAAGGAGAGGGAACAAAGATGAGGGAGTGACACATCCTGATAATGTGCCAAAGACAACCACAGGCAGACATACTGATGGCAGTGAGGCAGACGAGGAACACTGCTCATTGCTCTGCCTGCCTCACTTTTGTTCACGGGCCACCAGGAGGCCTGAGGTCCCAGGTGGACAGAAATCACCACGATCCCCTCTTGGCCCCAACCAACATACGCACAGGAGGCAAACCAACTTTTGATCATTTATTAAAACAAATAAGAGGTTAATCTGTGGGTAAAAAGGCCTTGTTTGTCAGCAGCTCAGGGGATGCCTTCCAGCTGACAGGCGCTAGCGCACTTTGAAGTAGGAAGCATCAAATGGGTTCTGGAGATAAGCAATAGATAAACAACGGGAGTTACCACAAGTGTCAAGCCAGGCATCACCTTCACAGAAATTATTCCTGGAGCGAATGTGGAAGTCATTAATCCCAAGAGAAAAGACAGAGGTGGGCATGGTGGCTCATGCCTGTCATCTCAACACTTTGGGAGGCCAAGGCGGGAGGATCCCTTGAAGCCAAGAGTCCAAGATCAGCCTGGGCAACAAAGTGAGACCTCGTCTCTACAACAACTAAACTAAATAAAATAAATTAGCCAGGTGCAGTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTAAGGCAGGAGGATTGCTTGAGCCCAGGAGGTCAAGGCTGCAGTGACCTATGATCACATCACTGCACTCCTGCCTGGTCCACAGAGCAAGGCCCTGTCTCTAAAAGTAAGAGAAGAGAAGACAGATGAAGCAAAGTGGGCCAAAACGTAGAAAAAGGAAATTGCTCTGTTTTAGATGAAGGATTGTGAAACAAAATTTTCAAAAGCAGCAATGAAAGACCTGTCTACCACAGTGTAGCCCTCAGCAAAACCACAAGTGGGCAGACTCTGACTCTCCCACACCCCTCTGGCTAACCCCAAACCCCTTCTAGATAGAATGTTCTCCTTCCTCTTCATCCTAATGCCAGGAGCAACTTTGGTGGTGCGTTCCCCACACCTGCCCCCTTTGCCAAAGCTCCAGGTTCCAGAACCTTCCTTTCTTTCTTCTCTTCTGCTTTAAGGCTTGCTTACCCTGAGTTCAAGATCCTTACAGCCTTGTTAGATAAATGGCTACATAAGATGACCGGTTAACCAGAGCGAGTATGGCTGATGATGGCTTCTGCAATATAATGAAATGAACCTGCTCCCACCTTCACTGAACGATCAACATTCACTTTGGTGTAATGGGGTAAACCATCAACATGTCCCTCCTGATGCAATGCACAGAGAACATGACACCATTGCTGTGATAGTCCCACCCCAAATGCATAAGAATATCACCGCCAAGAAACATCAGCCAAATCCAAAGTAAGGGACATTCTATCAAATAACCGTCTTGCGTTCTTCAAGAATGCCAATACCATGAAAGATAAAGAAAAACTGAGGATCTGTTCCAGGCTAAAAGGTACCTACAGAGACACAACAACTGAAAATAATGCATGATCTGGGATGATCGTTTGCTCCAATGTACATCATTGGGTTAACTGGCGAAATCTGAATGAGGTCCATTAGAAAACCGTATTGTAGCAGGGTTAGTTTCCTGATTTTGATCATTGCCTTGGTTATATAAGAGAAAGTCCTTGTTATTAAGGAATACACAGGAATATTTAGGGGTAAAGGATAACTCTTCTGCCACTTGGAAAATAATAAAGCAAATGGGGTAAAATGGTAGCACTGGGGAATCTCAGCGAAGGGTATAAAGGATGTCTTTGTACTATTTTTGCAACACTTCCATGTCTGGAAAAATAATAATAAATATTACATATTTAATAATTAAATGAATGAAAAAGTGCAATGTTTCTGCAGGTGTCGACCTTGGCAATGCAATAGGATCATCTCAGAAGCTCTGCATGAACATCAGTGCCCAGGCCCCAACCCAGAGATTCATAGTCAGTTAGCTGGGGGTGAA	C	.	PASS	SVTYPE=DEL;END=129806745;SVLEN=-43365	GT:AD:DP:SAC	0/1:5,4:9:1,4,3,1


================================================
FILE: tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/README
================================================
# extract-HG00096.vcf extract-tutu.vcf sont quasiment les mêmes fichiers :
# => nom de la colonne "sample" qui est différent
# => 2 variants différetns (au niveau de POS)

# diff extract-HG00096.vcf extract-tutu.vcf
< #CHROM        POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  HG00096
> #CHROM        POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  tutu
< 1     3809347 rs192032080     T       C       100.0   PASS    AC=14;AF=0.00279553  GT:DP   0|1:6
> 1     3809346 rs192032080     T       C       100.0   PASS    AC=14;AF=0.00279553  GT:DP   0|1:6

 
# Les comptes sont faits sur tous les samples (ici, HG00096 et tutu)
# Puis on affiche uniquement ceux dans -snvIndelSamples

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/SV.bed" -svtBEDcol 4 -outputFile "./output/SV_tcl.annotated.tsv" -snvIndelFiles "./input/extract-*.vcf" -snvIndelSamples tutu -genomeBuild GRCh37 -includeCI 0 &> "./output/output.log"

$cut "./output/SV_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Count_hom(HG00096);Count_htz(HG00096);Count_htz/allHom(HG00096);Count_htz/total(cohort);Count_total(cohort);Count_hom(tutu);Count_htz(tutu);Count_htz/allHom(tutu);kk"





================================================
FILE: tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


######################################################################
# Check of the "-snvIndelFiles" option (help for deletion filtering)
######################################################################

# => Add of the columns "Count_hom(HG00096);Count_htz(HG00096);Count_htz/allHom(HG00096);Count_htz/total(cohort);Count_total(cohort)"
# => Values reported only for deletions
# => Display of ratios only if Count_total(cohort) > 50



## ./input/SV.bed
#################
# 1       3777548 4234731 DEL
# 1       3777558 4234720 DUP

# BED => SV location = ]3777548-4234731]


## ./input/extract-HG00096.vcf
##############################
# cut -f 1,2,4,5,10 extract-HG00096.vcf

# #CHROM  POS     REF     ALT     HG00096
# 1       3777548 G       A       1|0:8
# 1       3809347 T       C       0|1:6
# 1       3812848 C       A,G     1|2:8
# 1       3817173 TG      T       1|0:2
# 1       3833398 CCGA    C       0|1:4
# 1       3833877 C       CA,CAA,CAAAA    1|0:0
# 1       3833945 A       AT,ATTT 1|1:4
# 1       4006388 C       A,T     0|1:6
# 1       4015685 C       A       0|1:2
# 1       4026068 G       A,T     1|1:4
# 1       4048855 ATT     AT,A    1|0:8
# 1       4072209 G       A,T     0|2:6
# 1       4073064 G       C,T     0|1:4
# 1       4086587 C       G       0|1:3
# 1       4121636 G       A,T     1|0:3
# 1       4122566 T       TTCTCTCC,TTCTCTCT       1|1:4
# 1       4128523 C       A,G     0|1:5
# 1       4196626 C       A,G     2|0:7
# 1       4204560 TCTTA   CCTTA,T 0|1:15
# 1       4234731 G       C       0|1:5

# => 20 lines <=> 34 SNV/indel (multiallelic) 

# -> The first SNV is not located in the DEL: 1:3777548 (exactly the same position than the DEL start) 
# -> 33 SNV/indel located in the DEL and 32 in the DUP: 65 in total

# It is to notice that AnnotSV reports only 1 count if 2 SNV/indel are located at the same position (e.g. 1       3812848 C       A,G     1|2:8)
# -> DEL : 16 SNV/indel htz + 3 hom



## AnnotSV analysis :
#####################


# First example:
mkdir -p ./output
rm -f "./output/SV_tcl.annotated.tsv" "./output/output.log"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/SV.bed" -svtBEDcol 4 -outputFile "./output/SV_tcl.annotated.tsv" -snvIndelFiles "./input/extract-HG00096.vcf" -genomeBuild GRCh37 -includeCI 0 &> "./output/output.log"
#        ...parsing of ./input/extract-HG00096.vcf (May 30 2025 - 12:33)
#                -> 37 SNV/indel located in all the SV (potentially with redundancy depending on SV overlap)
#                -> 37 SNV/indel loaded

if [ `grep -c " 37 SNV/indel loaded" "./output/output.log"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: SNV/indel not correctly loaded"
        exit 1
fi


# $cut "./output/SV_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Count_hom(HG00096);Count_htz(HG00096);Count_htz/allHom(HG00096);Count_htz/total(cohort);Count_total(cohort)"
#
# AnnotSV_ID      Annotation_mode Count_hom(HG00096)      Count_htz(HG00096)      Count_htz/allHom(HG00096)       Count_htz/total(cohort) Count_total(cohort)
# 1_3777548_4234731_DEL_1 full    3       16      NA      NA      19
# 1_3777548_4234731_DEL_1 split   0       2       NA      NA      2
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA      0
# 1_3777548_4234731_DEL_1 split   0       1       NA      NA      1
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA      0
# 1_3777548_4234731_DEL_1 split   0       1       NA      NA      1
# 1_3777558_4234720_DUP_1 full    NA      NA      NA      NA      NA
# 1_3777558_4234720_DUP_1 split   NA      NA      NA      NA      NA
# 1_3777558_4234720_DUP_1 split   NA      NA      NA      NA      NA
# 1_3777558_4234720_DUP_1 split   NA      NA      NA      NA      NA
# 1_3777558_4234720_DUP_1 split   NA      NA      NA      NA      NA
# 1_3777558_4234720_DUP_1 split   NA      NA      NA      NA      NA

if [ `$cut "./output/SV_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Count_hom(HG00096);Count_htz(HG00096);Count_htz/allHom(HG00096);Count_htz/total(cohort);Count_total(cohort)" | grep DEL | grep full | cut -f 3` == 3 ]
then
        echo "Ok"
else
        echo "error 1: SNV/indel not correctly loaded (Count_hom)"
        exit 1
fi

if [ `$cut "./output/SV_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Count_hom(HG00096);Count_htz(HG00096);Count_htz/allHom(HG00096);Count_htz/total(cohort);Count_total(cohort)" | grep DEL | grep full | cut -f 4` == 16 ]
then
        echo "Ok"
else
        echo "error 1: SNV/indel not correctly loaded (Count_htz)"
        exit 1
fi



# Check avec 3 samples (trio)
#############################

rm -f "./output/3samples_tcl.annotated.tsv" "./output/output.log"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/3samples.SV.vcf" -outputFile "./output/3samples_tcl.annotated.tsv" -snvIndelFiles "./input/3samples.extract-HG00096.snvindel.vcf" -genomeBuild GRCh38 -metrics us -snvIndelSamples "prob father mother" &> "./output/output.log"

#...parsing of snvIndelFiles for "father mother prob" (October 29 2021 - 16:20)
#        ...split multiallelic sites into multiple rows for 3samples.extract-HG00096.snvindel.vcf (October 29 2021 - 16:20)
#        ...parsing of 3samples.extract-HG00096.snvindel.vcf (October 29 2021 - 16:20)
#                -> 19 SNV/indel located in all the SV (potentially with redundancy depending on SV overlap)
#                -> 19 SNV/indel loaded

if [ `grep -c " 19 SNV/indel loaded" "./output/output.log"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: SNV/indel not correctly loaded"
        exit 1
fi


# $cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Count_hom(father);Count_htz(father);Count_htz/allHom(father);Count_htz/total(cohort)"
#
# AnnotSV_ID      Annotation_mode Count_hom(father)       Count_htz(father)       Count_htz/allHom(father)        Count_htz/total(cohort)
# 1_3777548_4234731_DEL_1 full    3       16      NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   1       4       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA

if [ `$cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Count_hom(father);Count_htz(father);Count_htz/allHom(father);Count_htz/total(cohort)" | grep DEL | grep full | cut -f 3` == 3 ]
then
        echo "Ok"
else
        echo "error 1: SNV/indel not correctly loaded (Count_hom)"
        exit 1
fi

if [ `$cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Count_hom(father);Count_htz(father);Count_htz/allHom(father);Count_htz/total(cohort)" | grep DEL | grep full | cut -f 4` == 16 ]
then
        echo "Ok"
else
        echo "error 1: SNV/indel not correctly loaded (Count_htz)"
        exit 1
fi


# $cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Count_hom(mother);Count_htz(mother);Count_htz/allHom(mother);Count_htz/total(cohort)"
#
# AnnotSV_ID      Annotation_mode Count_hom(mother)       Count_htz(mother)       Count_htz/allHom(mother)        Count_htz/total(cohort)
# 1_3777548_4234731_DEL_1 full    0       19      NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       5       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA

if [ `$cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Count_hom(mother);Count_htz(mother);Count_htz/allHom(mother);Count_htz/total(cohort)" | grep DEL | grep full | cut -f 4` == 19 ]
then
        echo "Ok"
else
        echo "error 1: SNV/indel not correctly loaded (Count_htz)"
        exit 1
fi


# $cut "./output/3samples_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Count_hom(prob);Count_htz(prob);Count_htz/allHom(prob);Count_htz/total(cohort)"
#
# AnnotSV_ID      Annotation_mode Count_hom(prob) Count_htz(prob) Count_htz/allHom(prob)  Count_htz/total(cohort)
# 1_3777548_4234731_DEL_1 full    0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA
# 1_3777548_4234731_DEL_1 split   0       0       NA      NA




echo "ok - Finished"





================================================
FILE: tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/input/3samples.SV.vcf
================================================
##fileformat=VCFv4.2
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	father	mother	prob
chr1	3777548	.	C	<DEL>	.	PASS	SVTYPE=DEL;END=4234731	GT:RR:RV	0/0:0:0	0/1:0:0	0/1:0:0


================================================
FILE: tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/input/3samples.extract-HG00096.snvindel.vcf
================================================
##fileformat=VCFv4.1
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	father	mother	prob
1	3809347	rs192032080	T	C	100.0	PASS	AC=14;AF=0.00279553;AN=5008;NS=2504;DP=19072;ASN_AF=0;AMR_AF=0.0043;SAS_AF=0.0010;EUR_AF=0.0089;EAS_AF=	GT:DP	0|1:6	1|0:8	1|0:8
1	3812848	rs10797353	C	A,G	100.0	PASS	AC=57,3330;AF=0.0113818,0.664936;AN=5008;NS=2504;DP=19321;ASN_AF=0,0;AMR_AF=0.0000,0.6268;AFR_A=5	GT:DP	1|2:8	1|0:8	0|0:8
1	3817173	........	TG	T	100.0	PASS	AC=10;AF=0.00199681;AN=5008;NS=2504;DP=14835;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0020;EUR_AF=0.00700	GT:DP	1|0:2	1|0:8	0|0:8
1	3833398	........	CCGA	C	100.0	PASS	AC=11;AF=0.00219649;AN=5008;NS=2504;DP=19903;ASN_AF=0;AMR_AF=0.0043;SAS_AF=;EUR_AF=0.0070;EAS_AF=SAN_A	GT:DP	0|1:4	1|0:8	0|0:8
1	3833877	rs145187421	C	A,TA,CA	100.0	PASS	AC=1236,37,20;AF=0.246805,0.00738818,0.00399361;AN=5008;NS=2504;DP=5844;ASN_AF=0,0,0;AMR_AF=00.333	GT:DP	1|0:0	1|0:8	0|0:8
1	3833945	rs142701658	A	AT,ATTT	100.0	PASS	AC=1592,9;AF=0.317891,0.00179712;AN=5008;NS=2504;DP=10572;ASN_AF=0,0;AMR_AF=0.2752,0.0014;SAS_AF=0.2812	GT:DP	1|1:4	1|0:8	0|0:8
1	4006388	rs12562706	C	A,T	100.0	PASS	AC=547,172;AF=0.109225,0.034345;AN=5008;NS=2504;DP=19839;ASN_AF=0,0;AMR_AF=0.0865,0.0115;SAS_AF=0.1135	GT:DP	0|1:6	1|0:8	0|0:8
1	4015685	rs182496271	C	A	100.0	PASS	AC=14;AF=0.00279553;AN=5008;NS=2504;DP=14943;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0041;EUR_AF=0.0099;SAS=0	GT:DP	0|1:2	1|0:8	0|0:8
1	4026068	rs12031275	G	A,T	100.0	PASS	AC=2263,2;AF=0.451877,0.000399361;AN=5008;NS=2504;DP=21227;ASN_AF=0,0;AMR_AF=0.6081,0.0014;SAS=0.4591	GT:DP	1|1:4	1|0:8	0|0:8
1	4048855	rs201570649	ATT	AT,A	100.0	PASS	AC=2530,598;AF=0.505192,0.119409;AN=5008;NS=2504;DP=19384;ASN_AF=0,0;AMR_AF=0.5173,0.0922;S=0.46,0.60	GT:DP	1|0:8	1|0:8	0|0:8
1	4072209	rs55798869	G	A,T	100.0	PASS	AC=9,1080;AF=0.00179712,0.215655;AN=5008;NS=2504;DP=16572;ASN_AF=0,0;AMR_AF=0.0043,0.1859;SASF=0.3149	GT:DP	0|2:6	1|0:8	0|0:8
1	4073064	rs12023372	G	C,T	100.0	PASS	AC=1102,49;AF=0.220048,0.00978435;AN=5008;NS=2504;DP=16050;ASN_AF=0,0;AMR_AF=0.1859,0.0086;S_AF=0.3160	GT:DP	0|1:4	1|0:8	0|0:8
1	4086587	rs190042198	C	G	100.0	PASS	AC=15;AF=0.00299521;AN=5008;NS=2504;DP=13007;ASN_AF=0;AMR_AF=0.0014;SAS_AF=0.0041;EUR_AF=0.0089;F=0	GT:DP	0|1:3	1|0:8	0|0:8
1	4121636	rs7556380	G	A,T	100.0	PASS	AC=1540,8;AF=0.307508,0.00159744;AN=5008;NS=2504;DP=15627;ASN_AF=0,0;AMR_AF=0.4323,0.0000;F=0.000	GT:DP	1|0:3	1|0:8	0|0:8
1	4122566	........	T	TTC,TCT	100.0	PASS	AC=3857,416;AF=0.770168,0.0830671;AN=5008;NS=2504;DP=19077;ASN_AF=0,0;SAN_AF=0,0;F=0.000000000000	GT:DP	1|1:4	1|0:8	0|0:8
1	4128523	rs10753358	C	A,G	100.0	PASS	AC=2541,25;AF=0.507388,0.00499201;AN=5008;NS=2504;DP=22170;ASN_AF=0,0;AMR_AF=0.4870,0.0014;F=0.33	GT:DP	0|1:5	1|0:8	0|0:8
1	4196626	........	C	A,G	100.0	PASS	AC=53,2359;AF=0.0105831,0.471046;AN=5008;NS=2504;DP=33401;ASN_AF=0,0;AMR_AF=0.0115,0.4582;SAS_AF=0.477	GT:DP	2|0:7	1|0:8	0|0:8
1	4204560	........	TCTTA	CCTTA,T	100.0	PASS	AC=2927,4;AF=0.584465,0.000798722;AN=5008;NS=2504;DP=107026;ASN_AF=0,0;AMR_AF=0.5965,0.0000;SAN_AF=0	GT:DP	0|1:15	1|0:8	0|0:8
1	4234731	.........	G	C	100.0	PASS	AC=1;AF=0.000199681;AN=5008;NS=2504;DP=16437;ASN_AF=0;AMR_AF=0.0000;SAS_AF=;EUR_AF=0.001000025222525	GT:DP	0|1:5	1|0:8	0|0:8


================================================
FILE: tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/input/SV.bed
================================================
1	3777548	4234731	DEL
1	3777558	4234720	DUP


================================================
FILE: tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/input/extract-HG00096.vcf
================================================
##fileformat=VCFv4.1
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG00096
1	3777548	rs61768955	G	A	100.0	PASS	AC=15;AF=0.00299521;AN=5008;NS=2504;DP=16236;ASN_AF=0;AMR_AF=0.0014;SAS_AF=0.0010;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0030;SAN_AF=0	GT:DP	1|0:8
1	3809347	rs192032080	T	C	100.0	PASS	AC=14;AF=0.00279553;AN=5008;NS=2504;DP=19072;ASN_AF=0;AMR_AF=0.0043;SAS_AF=0.0010;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0008;SAN_AF=0	GT:DP	0|1:6
1	3812848	rs10797353	C	A,G	100.0	PASS	AC=57,3330;AF=0.0113818,0.664936;AN=5008;NS=2504;DP=19321;ASN_AF=0,0;AMR_AF=0.0000,0.6268;SAS_AF=0.6155;EUR_AF=0.0070,0.7127;EAS_AF=0.0496,0.5595;AFR_AF=0.0000,0.7655;SAN_AF=0,0	GT:DP	1|2:8
1	3817173	.	TG	T	100.0	PASS	AC=10;AF=0.00199681;AN=5008;NS=2504;DP=14835;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0020;EUR_AF=0.0070;EAS_AF=;AFR_AF=0.0008;SAN_AF=0	GT:DP	1|0:2
1	3833398	.	CCGA	C	100.0	PASS	AC=11;AF=0.00219649;AN=5008;NS=2504;DP=19903;ASN_AF=0;AMR_AF=0.0043;SAS_AF=;EUR_AF=0.0070;EAS_AF=;AFR_AF=0.0008;SAN_AF=0	GT:DP	0|1:4
1	3833877	rs145187421	C	CA,CAA,CAAAA	100.0	PASS	AC=1236,37,20;AF=0.246805,0.00738818,0.00399361;AN=5008;NS=2504;DP=5844;ASN_AF=0,0,0;AMR_AF=0.1326,0.0058,0.0014;SAS_AF=0.2065,0.0072;EUR_AF=0.1312,0.0119,0.0000;EAS_AF=0.2361,0.0079;AFR_AF=0.4327,0.0045,0.0144;SAN_AF=0,0,0	GT:DP	1|0:0
1	3833945	rs142701658	A	AT,ATTT	100.0	PASS	AC=1592,9;AF=0.317891,0.00179712;AN=5008;NS=2504;DP=10572;ASN_AF=0,0;AMR_AF=0.2752,0.0014;SAS_AF=0.2812;EUR_AF=0.3946,0.0010;EAS_AF=0.2292;AFR_AF=0.3767,0.0053;SAN_AF=0,0	GT:DP	1|1:4
1	4006388	rs12562706	C	A,T	100.0	PASS	AC=547,172;AF=0.109225,0.034345;AN=5008;NS=2504;DP=19839;ASN_AF=0,0;AMR_AF=0.0865,0.0115;SAS_AF=0.1135;EUR_AF=0.1471,0.0010;EAS_AF=0.0665,0.0010;AFR_AF=0.1218,0.1225;SAN_AF=0,0	GT:DP	0|1:6
1	4015685	rs182496271	C	A	100.0	PASS	AC=14;AF=0.00279553;AN=5008;NS=2504;DP=14943;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0041;EUR_AF=0.0099;EAS_AF=;AFR_AF=0.0000;SAN_AF=0	GT:DP	0|1:2
1	4026068	rs12031275	G	A,T	100.0	PASS	AC=2263,2;AF=0.451877,0.000399361;AN=5008;NS=2504;DP=21227;ASN_AF=0,0;AMR_AF=0.6081,0.0014;SAS_AF=0.4591;EUR_AF=0.6531,0.0000;EAS_AF=0.5933;AFR_AF=0.1036,0.0008;SAN_AF=0,0	GT:DP	1|1:4
1	4048855	rs201570649	ATT	AT,A	100.0	PASS	AC=2530,598;AF=0.505192,0.119409;AN=5008;NS=2504;DP=19384;ASN_AF=0,0;AMR_AF=0.5173,0.0922;SAS_AF=0.4366,0.1360;EUR_AF=0.5239,0.0268;EAS_AF=0.5020,0.2212;AFR_AF=0.5378,0.1142;SAN_AF=0,0	GT:DP	1|0:8
1	4072209	rs55798869	G	A,T	100.0	PASS	AC=9,1080;AF=0.00179712,0.215655;AN=5008;NS=2504;DP=16572;ASN_AF=0,0;AMR_AF=0.0043,0.1859;SAS_AF=0.3149;EUR_AF=0.0000,0.3221;EAS_AF=0.0050,0.1806;AFR_AF=0.0008,0.1036;SAN_AF=0,0	GT:DP	0|2:6
1	4073064	rs12023372	G	C,T	100.0	PASS	AC=1102,49;AF=0.220048,0.00978435;AN=5008;NS=2504;DP=16050;ASN_AF=0,0;AMR_AF=0.1859,0.0086;SAS_AF=0.3160;EUR_AF=0.3221,0.0000;EAS_AF=0.1815;AFR_AF=0.1188,0.0325;SAN_AF=0,0	GT:DP	0|1:4
1	4086587	rs190042198	C	G	100.0	PASS	AC=15;AF=0.00299521;AN=5008;NS=2504;DP=13007;ASN_AF=0;AMR_AF=0.0014;SAS_AF=0.0041;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0008;SAN_AF=0	GT:DP	0|1:3
1	4121636	rs7556380	G	A,T	100.0	PASS	AC=1540,8;AF=0.307508,0.00159744;AN=5008;NS=2504;DP=15627;ASN_AF=0,0;AMR_AF=0.4323,0.0000;SAS_AF=0.3067;EUR_AF=0.2773,0.0000;EAS_AF=0.3929;AFR_AF=0.2005,0.0061;SAN_AF=0,0	GT:DP	1|0:3
1	4122566	.	T	TTCTCTCC,TTCTCTCT	100.0	PASS	AC=3857,416;AF=0.770168,0.0830671;AN=5008;NS=2504;DP=19077;ASN_AF=0,0;AMR_AF=0.8790,0.0504;SAS_AF=0.7413,0.0685;EUR_AF=0.8161,0.0388;EAS_AF=0.8562,0.0496;AFR_AF=0.6339,0.1702;SAN_AF=0,0	GT:DP	1|1:4
1	4128523	rs10753358	C	A,G	100.0	PASS	AC=2541,25;AF=0.507388,0.00499201;AN=5008;NS=2504;DP=22170;ASN_AF=0,0;AMR_AF=0.4870,0.0014;SAS_AF=0.5010;EUR_AF=0.5865,0.0000;EAS_AF=0.3819;AFR_AF=0.5582,0.0182;SAN_AF=0,0	GT:DP	0|1:5
1	4196626	.	C	A,G	100.0	PASS	AC=53,2359;AF=0.0105831,0.471046;AN=5008;NS=2504;DP=33401;ASN_AF=0,0;AMR_AF=0.0115,0.4582;SAS_AF=0.4775;EUR_AF=0.0229,0.4632;EAS_AF=0.0149,0.4792;AFR_AF=0.0053,0.4728;SAN_AF=0,0	GT:DP	2|0:7
1	4204560	.	TCTTA	CCTTA,T	100.0	PASS	AC=2927,4;AF=0.584465,0.000798722;AN=5008;NS=2504;DP=107026;ASN_AF=0,0;AMR_AF=0.5965,0.0000;SAS_AF=0.6207,0.0041;EUR_AF=0.5258,0.0000;EAS_AF=0.6151;AFR_AF=0.5726,0.0000;SAN_AF=0,0	GT:DP	0|1:15
1	4234731	.	G	C	100.0	PASS	AC=1;AF=0.000199681;AN=5008;NS=2504;DP=16437;ASN_AF=0;AMR_AF=0.0000;SAS_AF=;EUR_AF=0.0010;EAS_AF=;AFR_AF=0.0000;SAN_AF=0	GT:DP	0|1:5


================================================
FILE: tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/input/extract-tutu.vcf
================================================
##fileformat=VCFv4.1
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	tutu
1	3777548	rs61768955	G	A	100.0	PASS	AC=15;AF=0.00299521;AN=5008;NS=2504;DP=16236;ASN_AF=0;AMR_AF=0.0014;SAS_AF=0.0010;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0030;SAN_AF=0	GT:DP	1|0:8
1	3809346	rs192032080	T	C	100.0	PASS	AC=14;AF=0.00279553;AN=5008;NS=2504;DP=19072;ASN_AF=0;AMR_AF=0.0043;SAS_AF=0.0010;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0008;SAN_AF=0	GT:DP	0|1:6
1	3812848	rs10797353	C	A,G	100.0	PASS	AC=57,3330;AF=0.0113818,0.664936;AN=5008;NS=2504;DP=19321;ASN_AF=0,0;AMR_AF=0.0000,0.6268;SAS_AF=0.6155;EUR_AF=0.0070,0.7127;EAS_AF=0.0496,0.5595;AFR_AF=0.0000,0.7655;SAN_AF=0,0	GT:DP	1|2:8
1	3817173	.	TG	T	100.0	PASS	AC=10;AF=0.00199681;AN=5008;NS=2504;DP=14835;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0020;EUR_AF=0.0070;EAS_AF=;AFR_AF=0.0008;SAN_AF=0	GT:DP	1|0:2
1	3833398	.	CCGA	C	100.0	PASS	AC=11;AF=0.00219649;AN=5008;NS=2504;DP=19903;ASN_AF=0;AMR_AF=0.0043;SAS_AF=;EUR_AF=0.0070;EAS_AF=;AFR_AF=0.0008;SAN_AF=0	GT:DP	0|1:4
1	3833877	rs145187421	C	CA,CAA,CAAAA	100.0	PASS	AC=1236,37,20;AF=0.246805,0.00738818,0.00399361;AN=5008;NS=2504;DP=5844;ASN_AF=0,0,0;AMR_AF=0.1326,0.0058,0.0014;SAS_AF=0.2065,0.0072;EUR_AF=0.1312,0.0119,0.0000;EAS_AF=0.2361,0.0079;AFR_AF=0.4327,0.0045,0.0144;SAN_AF=0,0,0	GT:DP	1|0:0
1	3833945	rs142701658	A	AT,ATTT	100.0	PASS	AC=1592,9;AF=0.317891,0.00179712;AN=5008;NS=2504;DP=10572;ASN_AF=0,0;AMR_AF=0.2752,0.0014;SAS_AF=0.2812;EUR_AF=0.3946,0.0010;EAS_AF=0.2292;AFR_AF=0.3767,0.0053;SAN_AF=0,0	GT:DP	1|1:4
1	4006388	rs12562706	C	A,T	100.0	PASS	AC=547,172;AF=0.109225,0.034345;AN=5008;NS=2504;DP=19839;ASN_AF=0,0;AMR_AF=0.0865,0.0115;SAS_AF=0.1135;EUR_AF=0.1471,0.0010;EAS_AF=0.0665,0.0010;AFR_AF=0.1218,0.1225;SAN_AF=0,0	GT:DP	0|1:6
1	4015685	rs182496271	C	A	100.0	PASS	AC=14;AF=0.00279553;AN=5008;NS=2504;DP=14943;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0041;EUR_AF=0.0099;EAS_AF=;AFR_AF=0.0000;SAN_AF=0	GT:DP	0|1:2
1	4026068	rs12031275	G	A,T	100.0	PASS	AC=2263,2;AF=0.451877,0.000399361;AN=5008;NS=2504;DP=21227;ASN_AF=0,0;AMR_AF=0.6081,0.0014;SAS_AF=0.4591;EUR_AF=0.6531,0.0000;EAS_AF=0.5933;AFR_AF=0.1036,0.0008;SAN_AF=0,0	GT:DP	1|1:4
1	4048855	rs201570649	ATT	AT,A	100.0	PASS	AC=2530,598;AF=0.505192,0.119409;AN=5008;NS=2504;DP=19384;ASN_AF=0,0;AMR_AF=0.5173,0.0922;SAS_AF=0.4366,0.1360;EUR_AF=0.5239,0.0268;EAS_AF=0.5020,0.2212;AFR_AF=0.5378,0.1142;SAN_AF=0,0	GT:DP	1|0:8
1	4072209	rs55798869	G	A,T	100.0	PASS	AC=9,1080;AF=0.00179712,0.215655;AN=5008;NS=2504;DP=16572;ASN_AF=0,0;AMR_AF=0.0043,0.1859;SAS_AF=0.3149;EUR_AF=0.0000,0.3221;EAS_AF=0.0050,0.1806;AFR_AF=0.0008,0.1036;SAN_AF=0,0	GT:DP	0|2:6
1	4073064	rs12023372	G	C,T	100.0	PASS	AC=1102,49;AF=0.220048,0.00978435;AN=5008;NS=2504;DP=16050;ASN_AF=0,0;AMR_AF=0.1859,0.0086;SAS_AF=0.3160;EUR_AF=0.3221,0.0000;EAS_AF=0.1815;AFR_AF=0.1188,0.0325;SAN_AF=0,0	GT:DP	0|1:4
1	4086587	rs190042198	C	G	100.0	PASS	AC=15;AF=0.00299521;AN=5008;NS=2504;DP=13007;ASN_AF=0;AMR_AF=0.0014;SAS_AF=0.0041;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0008;SAN_AF=0	GT:DP	0|1:3
1	4121636	rs7556380	G	A,T	100.0	PASS	AC=1540,8;AF=0.307508,0.00159744;AN=5008;NS=2504;DP=15627;ASN_AF=0,0;AMR_AF=0.4323,0.0000;SAS_AF=0.3067;EUR_AF=0.2773,0.0000;EAS_AF=0.3929;AFR_AF=0.2005,0.0061;SAN_AF=0,0	GT:DP	1|0:3
1	4122566	.	T	TTCTCTCC,TTCTCTCT	100.0	PASS	AC=3857,416;AF=0.770168,0.0830671;AN=5008;NS=2504;DP=19077;ASN_AF=0,0;AMR_AF=0.8790,0.0504;SAS_AF=0.7413,0.0685;EUR_AF=0.8161,0.0388;EAS_AF=0.8562,0.0496;AFR_AF=0.6339,0.1702;SAN_AF=0,0	GT:DP	1|1:4
1	4128523	rs10753358	C	A,G	100.0	PASS	AC=2541,25;AF=0.507388,0.00499201;AN=5008;NS=2504;DP=22170;ASN_AF=0,0;AMR_AF=0.4870,0.0014;SAS_AF=0.5010;EUR_AF=0.5865,0.0000;EAS_AF=0.3819;AFR_AF=0.5582,0.0182;SAN_AF=0,0	GT:DP	0|1:5
1	4196626	.	C	A,G	100.0	PASS	AC=53,2359;AF=0.0105831,0.471046;AN=5008;NS=2504;DP=33401;ASN_AF=0,0;AMR_AF=0.0115,0.4582;SAS_AF=0.4775;EUR_AF=0.0229,0.4632;EAS_AF=0.0149,0.4792;AFR_AF=0.0053,0.4728;SAN_AF=0,0	GT:DP	2|0:7
1	4204560	.	TCTTA	CCTTA,T	100.0	PASS	AC=2927,4;AF=0.584465,0.000798722;AN=5008;NS=2504;DP=107026;ASN_AF=0,0;AMR_AF=0.5965,0.0000;SAS_AF=0.6207,0.0041;EUR_AF=0.5258,0.0000;EAS_AF=0.6151;AFR_AF=0.5726,0.0000;SAN_AF=0,0	GT:DP	0|1:15
1	4234731	.	G	C	100.0	PASS	AC=1;AF=0.000199681;AN=5008;NS=2504;DP=16437;ASN_AF=0;AMR_AF=0.0000;SAS_AF=;EUR_AF=0.0010;EAS_AF=;AFR_AF=0.0000;SAN_AF=0	GT:DP	0|1:5


================================================
FILE: tests/AnnotSV/test_27_Samples_ID/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}


## Checking the creation of the "Samples_ID" column in the AnnotSV output
## -------------------------------------------------------------------------
## -> automatic creation with a VCF as input
## -> via the "-samplesidBEDcol" option with a BED as input, else exists with "NA" values

## We check:
## - that the "Samples_ID" column exists, and that the values are correct
## - that there is no "shift" with the other columns

## Different options are to be tested (because they are involved in the creation of this feature):
## -SVinputInfo
## -svtBEDcol
## -samplesidBEDcol

## We also need to check a BED with or without header



# SV input BED file with header
###############################
mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtbedcol 4 -samplesidBEDcol 5 -genomeBuild GRCh37
# Samples_ID      ACMG_class
# sample1 	  3
# sample1,sampl2  1
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "1 3 ACMG_class" " " "$v"
        then
                echo "Error with ./input/test.bed (test 1A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID sample1 sample1,sampl2" " " "$v"
        then
                echo "Error with ./input/test.bed (test 1B)"
                echo "error 1"
                exit 1
        fi
done


rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -genomeBuild GRCh37
# => No SV ranking
# => No Samples_ID
# Samples_ID  ACMG_class
# NA          NA
# NA          NA
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 2A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 2B)"
                echo "error 1"
                exit 1
        fi
done




rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtbedcol 4 -genomeBuild GRCh37
# => No Samples_ID
# Samples_ID ACMG_class
# NA         3
# NA         1
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class 3 1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 3A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 3B)"
                echo "error 1"
                exit 1
        fi
done


rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -samplesidBEDcol 5 -genomeBuild GRCh37
# => No SV ranking
# Samples_ID      ACMG_class
# sample1,sampl2  NA
# sample1 NA
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 4A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID sample1,sampl2 sample1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 4B)"
                echo "error 1"
                exit 1
        fi
done



rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 0 -outputFile "./output/test_tcl.annotated.tsv" -svtbedcol 4 -samplesidBEDcol 5 -genomeBuild GRCh37
# Samples_ID      ACMG_class
# sample1 	  3
# sample1,sampl2  1
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class 3 1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 5A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID sample1,sampl2 sample1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 5B)"
                echo "error 1"
                exit 1
        fi
done



rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 0 -outputFile "./output/test_tcl.annotated.tsv" -genomeBuild GRCh37
# => No SV ranking
# => No Samples_ID
# Samples_ID  ACMG_class
# NA          NA
# NA          NA
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 6A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 6B)"
                echo "error 1"
                exit 1
        fi
done



rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 0 -outputFile "./output/test_tcl.annotated.tsv" -svtbedcol 4 -genomeBuild GRCh37
# => No Samples_ID
# Samples_ID    ACMG_class
# NA      	3
# NA      	1
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class 3 1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 7A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 7B)"
                echo "error 1"
                exit 1
        fi
done


rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 0 -outputFile "./output/test_tcl.annotated.tsv" -samplesidBEDcol 5 -genomeBuild GRCh37
# => No SV ranking
$cut "./output/test_tcl.annotated.tsv" "Samples_ID;ACMG_class"
# Samples_ID      ACMG_class
# sample1,sampl2  NA
# sample1         NA
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 8A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID sample1,sampl2 sample1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 8B)"
                echo "error 1"
                exit 1
        fi
done




# SV input BED file without header
##################################

rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test-withoutHeader.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtbedcol 4 -samplesidBEDcol 5 -genomeBuild GRCh37
$cut "./output/test_tcl.annotated.tsv" "Samples_ID;ACMG_class"
# Samples_ID      ACMG_class
# sample1         3
# sample1,sampl2  1
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class 3 1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 9A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID sample1,sampl2 sample1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 9B)"
                echo "error 1"
                exit 1
        fi
done


rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test-withoutHeader.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -genomeBuild GRCh37
# => No SV ranking
# => No Samples_ID
# Samples_ID   ACMG_class
# NA           NA
# NA           NA
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 10A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 10B)"
                echo "error 1"
                exit 1
        fi
done




rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test-withoutHeader.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtbedcol 4 -genomeBuild GRCh37
# => No Samples_ID
# Samples_ID      ACMG_class
# NA      3
# NA      1
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class 3 1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 11A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 11B)"
                echo "error 1"
                exit 1
        fi
done


rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test-withoutHeader.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -samplesidBEDcol 5 -genomeBuild GRCh37
# => No SV ranking
# Samples_ID      ACMG_class
# sample1,sampl2  NA
# sample1         NA
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 12A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID sample1,sampl2 sample1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 12B)"
                echo "error 1"
                exit 1
        fi
done


rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test-withoutHeader.bed" -SVinputInfo 0 -outputFile "./output/test_tcl.annotated.tsv" -svtbedcol 4 -samplesidBEDcol 5 -genomeBuild GRCh37
# Samples_ID      ACMG_class
# sample1 	  3
# sample1,sampl2  1
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class 3 1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 13A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID sample1,sampl2 sample1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 13B)"
                echo "error 1"
                exit 1
        fi
done


rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test-withoutHeader.bed" -SVinputInfo 0 -outputFile "./output/test_tcl.annotated.tsv" -genomeBuild GRCh37
# => No SV ranking
# => No Samples_ID
# Samples_ID      ACMG_class
# NA      NA
# NA      NA
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 14A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 14B)"
                echo "error 1"
                exit 1
        fi
done



rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test-withoutHeader.bed" -SVinputInfo 0 -outputFile "./output/test_tcl.annotated.tsv" -svtbedcol 4 -genomeBuild GRCh37
# => No Samples_ID
# Samples_ID      ACMG_class
# NA              3
# NA              1
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class 3 1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 15A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 15B)"
                echo "error 1"
                exit 1
        fi
done


rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test-withoutHeader.bed" -SVinputInfo 0 -outputFile "./output/test_tcl.annotated.tsv" -samplesidBEDcol 5 -genomeBuild GRCh37
# => No SV ranking
# Samples_ID      ACMG_class
# sample1,sampl2  NA
# sample1         NA
for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class"`
do
        if ! exists_in_list "ACMG_class NA" " " "$v"
        then
                echo "Error with ./input/test.bed (test 16A)"
                echo "error 1"
                exit 1
        fi
done
for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID"`
do
        if ! exists_in_list "Samples_ID sample1,sampl2 sample1" " " "$v"
        then
                echo "Error with ./input/test.bed (test 16B)"
                echo "error 1"
                exit 1
        fi
done



# SV input VCF file
###################

rm -f "./output/test_tcl.unannotated.tsv"
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.vcf" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -genomeBuild GRCh37
# $cut "./output/test_tcl.annotated.tsv" "Samples_ID;ACMG_class"| grep -v full | sort -u
# Samples_ID      ACMG_class
# sample1 3
# sample1,sample2 NA
# sample2 1
# sample2 3
# sample2 NA

annotations=`$cut "./output/test_tcl.annotated.tsv" "ACMG_class" | grep -v full | sort -u` 
if [ `echo $annotations | grep -c "1 3 ACMG_class NA"` != 1 ]
then
        echo "Error with ./input/test.bed (test 17A)"
        echo "error 1"
        exit 1
fi

for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID" | grep -v full | sort -u`
do
        if ! exists_in_list "Samples_ID sample1,sample3 sample1,sample2,sample3 sample2 sample2,sample3" " " "$v"
        then
                echo "Error with ./input/test.bed (test 17B)"
                echo "error 1"
                exit 1
        fi
done

rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.vcf" -SVinputInfo 0 -outputFile "./output/test_tcl.annotated.tsv" -genomeBuild GRCh37
# $cut "./output/test_tcl.annotated.tsv" "Samples_ID;ACMG_class"| grep -v full | sort -u
# Samples_ID      ACMG_class
# sample1 3
# sample1,sample2 NA
# sample2 1
# sample2 3
# sample2 NA
annotations=`$cut "./output/test_tcl.annotated.tsv" "ACMG_class" | grep -v full | sort -u`
if [ `echo $annotations | grep -c "1 3 ACMG_class NA"` != 1 ]
then
        echo "Error with ./input/test.bed (test 18A)"
        echo "error 1"
        exit 1
fi

for v in `$cut "./output/test_tcl.annotated.tsv" "Samples_ID" | grep -v full | sort -u`
do
        if ! exists_in_list "Samples_ID sample1,sample3 sample1,sample2,sample3 sample2 sample2,sample3" " " "$v"
        then
                echo "Error with ./input/test.bed (test 18B)"
                echo "error 1"
                exit 1
        fi
done




echo "ok - Finished"





================================================
FILE: tests/AnnotSV/test_27_Samples_ID/input/test-withoutHeader.bed
================================================
13	19341426	19360783	DUP	sample1
1	4204667	4204717	DEL	sample1,sampl2


================================================
FILE: tests/AnnotSV/test_27_Samples_ID/input/test.bed
================================================
#Chrom	start	end	svtype	samplesNames
13	19341426	19360783	DUP	sample1
1	4204667	4204717	DEL	sample1,sampl2


================================================
FILE: tests/AnnotSV/test_27_Samples_ID/input/test.vcf
================================================
##fileformat=VCFv4.2
##source=LUMPY
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=STRANDS,Number=.,Type=String,Description="Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description="Confidence interval (95%) around POS for imprecise variants">
##INFO=<ID=CIEND95,Number=2,Type=Integer,Description="Confidence interval (95%) around END for imprecise variants">
##INFO=<ID=MATEID,Number=.,Type=String,Description="ID of mate breakends">
##INFO=<ID=EVENT,Number=1,Type=String,Description="ID of event associated to breakend">
##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description="Secondary breakend in a multi-line variants">
##INFO=<ID=SU,Number=.,Type=Integer,Description="Number of pieces of evidence supporting the variant across all samples">
##INFO=<ID=PE,Number=.,Type=Integer,Description="Number of paired-end reads supporting the variant across all samples">
##INFO=<ID=SR,Number=.,Type=Integer,Description="Number of split reads supporting the variant across all samples">
##INFO=<ID=BD,Number=.,Type=Integer,Description="Amount of BED evidence supporting the variant across all samples">
##INFO=<ID=EV,Number=.,Type=String,Description="Type of LUMPY evidence contributing to the variant call">
##INFO=<ID=PRPOS,Number=.,Type=String,Description="LUMPY probability curve of the POS breakend">
##INFO=<ID=PREND,Number=.,Type=String,Description="LUMPY probability curve of the END breakend">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=DUP:TANDEM,Description="Tandem duplication">
##ALT=<ID=INS,Description="Insertion of novel sequence">
##ALT=<ID=CNV,Description="Copy number variable region">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=SU,Number=1,Type=Integer,Description="Number of pieces of evidence supporting the variant">
##FORMAT=<ID=PE,Number=1,Type=Integer,Description="Number of paired-end reads supporting the variant">
##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Number of split reads supporting the variant">
##FORMAT=<ID=BD,Number=1,Type=Integer,Description="Amount of BED evidence supporting the variant">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sample1	sample2	sample3
1	67452229	166_1	N	[1:67452635[N	353.30	.	SVTYPE=BND;STRANDS=--:33;CIPOS=-2,0;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=166_2;EVENT=166;SU=33;PE=17;SR=16	GT	1/1	0/1	./.
1	67452635	166_2	N	[1:67452229[N	353.30	.	SVTYPE=BND;STRANDS=--:33;CIPOS=-10,9;CIEND=-2,0;CIPOS95=0,0;CIEND95=0,0;MATEID=166_1;EVENT=166;SECONDARY;SU=33;PE=17;SR=16	GT	0/0	0/1	./.
1	118091051	275	N	<DEL>	311.66	.	SVTYPE=DEL;SVLEN=-207;END=118091258;STRANDS=+-:13;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=13;PE=0;SR=13	GT	1/0	0/0	./.
1	182884306	367	N	<DEL>	149.85	.	SVTYPE=DEL;SVLEN=-14;END=182884320;STRANDS=+-:7;CIPOS=-5,4;CIEND=-5,4;CIPOS95=0,0;CIEND95=0,0;SU=7;PE=0;SR=7	GT	0/0	0/1	./.
1	186826187	370_1	N	N]1:186826404]	98.88	.	SVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_2;EVENT=370;SU=8;PE=0;SR=8	GT	0/0	0/1	0/0
1	186826404	370_2	N	N]1:186826187]	98.88	.	SVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_1;EVENT=370;SECONDARY;SU=8;PE=0;SR=8	GT	0/0	0/1	0/0
2	27313898	606	N	<DEL>	59.61	.	SVTYPE=DEL;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6	GT	0/0	0/1	0/0
2	35576937	649	N	<DEL>	68.88	.	SVTYPE=DEL;SVLEN=-27;END=35576964;STRANDS=+-:8;CIPOS=-10,9;CIEND=-9,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT	0/0	0/1	0/0
2	88429841	756	N	<DEL>	296.20	.	SVTYPE=DEL;SVLEN=-311;END=88430152;STRANDS=+-:15;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=15;PE=0;SR=15	GT	0/0	0/1	./.
2	129550225	855	N	<DEL>	4.68	.	SVTYPE=DEL;SVLEN=-28;END=129550253;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6	GT	0/0	0/1	./.
2	224699787	1036	N	<DEL>	53.85	.	SVTYPE=DEL;SVLEN=-10;END=224699797;STRANDS=+-:16;CIPOS=-2,1;CIEND=-2,1;CIPOS95=0,0;CIEND95=0,0;SU=16;PE=0;SR=16	GT	0/0	0/1	0/0
2	236378717	1068	N	<DEL>	99.30	.	SVTYPE=DEL;SVLEN=-26;END=236378743;STRANDS=+-:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT	0/0	0/1	0/0
2	241726086	1097	N	<DEL>	26.62	.	SVTYPE=DEL;SVLEN=-33;END=241726119;STRANDS=+-:8;CIPOS=-10,9;CIEND=-1,7;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT	0/0	0/1	./.
2	242411342	1105	N	<DEL>	137.63	.	SVTYPE=DEL;SVLEN=-180;END=242411522;STRANDS=+-:5;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=5;PE=0;SR=5	GT	0/0	0/1	0/0
3	6162950	1125	N	<DEL>	260.82	.	SVTYPE=DEL;SVLEN=-91;END=6163041;STRANDS=+-:8;CIPOS=-10,8;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8	GT	0/0	0/1	0/0
3	7905948	1132	N	<DEL>	362.44	.	SVTYPE=DEL;SVLEN=-202;END=7906150;STRANDS=+-:9;CIPOS=-4,3;CIEND=-4,3;CIPOS95=0,0;CIEND95=0,0;SU=9;PE=0;SR=9	GT	0/0	0/1	0/0
3	26450970	1166	N	<DEL>	563.52	.	SVTYPE=DEL;SVLEN=-1328;END=26452298;STRANDS=+-:29;CIPOS=-2,1;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=29;PE=14;SR=15	GT	0/0	0/1	0/0


================================================
FILE: tests/AnnotSV/test_28_SVsharingTheSameCoordinatesButWithDifferentSVTYPE/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"



# Special case
##############
# 2 SVs exist with the same coordinates but with a different type (DEL, DUP):
# 	1       3777548 4234731 tt      DEL
# 	1       3777548 4234731 tt      DUP

# => We do have 2 different SVs!
# We must have full + split annotations for these 2 SVs.

mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -svtBEDcol 5 -outputFile "./output/test_tcl.annotated.tsv" -genomeBuild GRCh37

# $cut "./output/test_tcl.annotated.tsv" "AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_length;;SV_type;Annotation_mode;Gene_name"
# AnnotSV_ID      SV_chrom        SV_start        SV_end  SV_length       SV_type Annotation_mode Gene_name
# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     full    C1orf174;DFFB;LINC01134;LINC01345;LINC01346
# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     split   C1orf174
# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     split   DFFB
# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     split   LINC01134
# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     split   LINC01345
# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     split   LINC01346
# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     full    C1orf174;DFFB;LINC01134;LINC01345;LINC01346
# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     split   C1orf174
# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     split   DFFB
# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     split   LINC01134
# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     split   LINC01345
# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     split   LINC01346

if [ `$cut "./output/test_tcl.annotated.tsv" "AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_length;SV_type;Annotation_mode;Gene_name" | grep -c "1_3777549_4234731_DEL_1"` -gt 1 ]
then
        echo "Ok"
else
        echo "error 1: 1_3777548_4234731_DEL_1 is not correctly reported"
        exit 1
fi

if [ `$cut "./output/test_tcl.annotated.tsv" "AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_length;SV_type;Annotation_mode;Gene_name" | grep -c "1_3777549_4234731_DUP_1"` -gt 1 ]
then
        echo "Ok"
else
        echo "error 1: 1_3777548_4234731_DUP_1 is not correctly reported"
        exit 1
fi


echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_28_SVsharingTheSameCoordinatesButWithDifferentSVTYPE/input/test.bed
================================================
1	3777548	4234731	tt	DEL
1	3777548	4234731	tt	DUP


================================================
FILE: tests/AnnotSV/test_29_distNearestSS/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

# GRCh37, NM_001037668:
#######################
# NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*):
#   - NM_001037668.1 - chr8:7669242-7673238
# UCSC annotations of RefSeq RNAs (NM_* and NR_*):
#   - NM_001037668 - chr8:7669242-7673238
#   - NM_001037668 - chr8:7353368-7366833


#############################################################################################
## Checking of "-distNearestSS"
#############################################################################################

# Each SV has 2 breakpoints: BND left and BND right


# (Strand -) BND left outside the gene + BND right in the last exon of a gene
#############################################################################

# Input SV: chr8:7669129-7669261

# gr "NM_001037668" $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed
# 8       7669241 7673238 -       DEFB107A        NM_001037668    7669329 7673150 7669241,7673080,        7669472,7673238,
# => NM_001037668 : strand = -

# The "SVright" (7669261) is located in the last exon of the transcript NM_001037668 (7669241-7669472)
# The BND is 20 bp after the end of the last exon (3') : 7669261 - 7669241 = 20
#         and 211 bp (7669472 - 7669261)  bp before the start of the exon (last exon => the end of the exon does not correspond to a splice site)
# => we can only calculate the distance in relation to the site in 3' (acceptor)
# => distNearestSS = 211 in 3'

mkdir -p ./output
rm -f "./output/test1_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test1.vcf" -outputFile "./output/test1_tcl.annotated.tsv" -genomeBuild GRCh37

# $cut "./output/test1_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type"
# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type
# 8_7669129_7669261_DEL_1 full    DEFB107A
# 8_7669129_7669261_DEL_1 split   DEFB107A        NM_001037668    exon2-txEnd     3'UTR   211     3'

annotations=`$cut "./output/test1_tcl.annotated.tsv" "Tx;Dist_nearest_SS;Nearest_SS_type" | grep "NM_001037668"`
if [ `echo $annotations | grep -c "NM_001037668 211 3'"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: Dist_nearest_SS and Nearest_SS_type values for NM_001037668 are not correct (test1)"
        exit 1
fi

# SV that overlaps a gene, but with breakpoints outside the gene
################################################################

# We must not have a value for distNearestSS

# gr "bbs10" $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed
# 12      76738253        76742195        -       BBS10   NM_024685       76739592        76742138        76738253,76741941,      76741567,76742195,
# => strand = -

# Input SV: 12:76738000-76742200
rm -f "./output/test2_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test2.bed" -outputFile "./output/test2_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37

# $cut "./output/test2_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type"
# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type
# 12_76738001_76742200_DEL_1      full    BBS10
# 12_76738001_76742200_DEL_1      split   BBS10   NM_024685       txStart-txEnd   5'UTR-3'UTR

annotations=`$cut "./output/test2_tcl.annotated.tsv" "Tx;Dist_nearest_SS;Nearest_SS_type" | grep "NM_024685"`
if [ $annotations == "NM_024685" ]
then
        echo "Ok"
else
        echo "error 1: Dist_nearest_SS and Nearest_SS_type values for NM_024685 should be empty (test2)"
        exit 1
fi



# SV with breakpoints in a gene "strand -" : 1 BND in the 1st exon, 1 BND in the intron
#######################################################################################

# Input SV: 12:76738280-76741600

# gr "bbs10"  $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed
# 12      76738253        76742195        -       BBS10   NM_024685       76739592        76742138        76738253,76741941,      76741567,76742195,
rm -f "./output/test3_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test3.bed" -outputFile "./output/test3_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37

# $cut "./output/test3_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type"
# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type
# 12_76738281_76741600_DEL_1      full    BBS10
# 12_76738281_76741600_DEL_1      split   BBS10   NM_024685       intron1-exon2   CDS-3'UTR       33      3'

annotations=`$cut "./output/test3_tcl.annotated.tsv" "Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type" | grep NM_024685`
if [ `echo $annotations | grep -c "NM_024685 intron1-exon2 CDS-3'UTR 33 3'"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: Dist_nearest_SS and Nearest_SS_type values for NM_024685 are not correct (test3)"
        exit 1
fi



# SV with breakpoints in a gene containing many exons, strand +
###############################################################

# Input SV: 2:170343580-170349500

# gr "bbs5" $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed
# 2       170336003       170363165       +       BBS5    NM_152384       170336063       170361092       170336003,170338760,170343578,170344315,170344496,170349383,170350250,170354136,170355995,170359604,170360812,170360990,    170336122,170338843,170343644,170344365,170344624,170349519,170350346,170354199,170356130,170359688,170360836,170363165,
rm -f "./output/test4_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test4.bed" -outputFile "./output/test4_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37

# $cut "./output/test4_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type"
# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type
# 2_170343580_170349500_DEL_1     full    BBS5
# 2_170343580_170349500_DEL_1     split   BBS5    NM_152384       exon3-exon6     CDS     2       3'

annotations=`$cut "./output/test4_tcl.annotated.tsv" "Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type" | grep "NM_152384"`
if [ `echo $annotations | grep -c "NM_152384 exon3-exon6 CDS 2 3'"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: Dist_nearest_SS and Nearest_SS_type values for NM_152384 are not correct (test4)"
        exit 1
fi


# SV with a breakpoint located exactly on the 1st base of an exon
#################################################################

# Input SV : 2:170343650-170344315

# gr "bbs5" $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed
# 2       170336003       170363165       +       BBS5    NM_152384       170336063       170361092       170336003,170338760,170343578,170344315,170344496,170349383,170350250,170354136,170355995,170359604,170360812,170360990,    170336122,170338843,170343644,170344365,170344624,170349519,170350346,170354199,170356130,170359688,170360836,170363165,
rm -f "./output/test5_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test5.bed" -outputFile "./output/test5_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37

# $cut "./output/test5_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type"
# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type
# 2_170343650_170344315_DEL_1     full    BBS5
# 2_170343650_170344315_DEL_1     split   BBS5    NM_152384       intron3-intron3 CDS     0       3'
annotations=`$cut "./output/test5_tcl.annotated.tsv" "Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type" | grep "NM_152384"`
if [ `echo $annotations | grep -c "NM_152384 intron3-intron3 CDS 0 3'"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: Dist_nearest_SS and Nearest_SS_type values for NM_152384 are not correct (test5)"
        exit 1
fi



# SV with one breakpoint that matches exactly the end of one exon, and the other breakpoint that matches exactly the start of another exon
##########################################################################################################################################

# Input SV: 11:7716419-7716800 DEL

# grep "NM_198185" $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed
# 11      7710667 7728024 -       OVCH2   NM_198185       7711185 7727941 7710667,7711154,7712499,7713132,7716288,7716800,7717231,7718011,7718255,7720296,7721842,7722870,7723262,7723703,7725244,7726111,7727853,    7710833,7711244,7712631,7713226,7716419,7716915,7717257,7718136,7718346,7720320,7722032,7723022,7723358,7723876,7725336,7726221,7728024,

rm -f "./output/test6_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test6.bed" -outputFile "./output/test6_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37

# $cut "./output/test6_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type"
# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type
# 11_7716903_7717219_DEL_1        full    OVCH2
# 11_7716903_7717219_DEL_1        split   OVCH2   NM_198185       intron12-intron12       CDS     0       3'
annotations=`$cut "./output/test6_tcl.annotated.tsv" "Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type" | grep "NM_198185"`
if [ `echo $annotations | grep -c "NM_198185 intron12-intron12 CDS 0 3'"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: Dist_nearest_SS and Nearest_SS_type values for NM_152384 are not correct (test6)"
        exit 1
fi







echo "ok - Finished"





================================================
FILE: tests/AnnotSV/test_29_distNearestSS/input/test1.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	ALBS
chr8	7669129	.	N	<DEL>	12	cnvLength	SVTYPE=CNV;END=7669261	GT:SM:CN:BC:PE	0/1:0.604884:1:1:2,2


================================================
FILE: tests/AnnotSV/test_29_distNearestSS/input/test2.bed
================================================
12	76738000	76742200	DEL


================================================
FILE: tests/AnnotSV/test_29_distNearestSS/input/test3.bed
================================================
12	76738280	76741600	DEL


================================================
FILE: tests/AnnotSV/test_29_distNearestSS/input/test4.bed
================================================
2	170343580	170349500	DEL


================================================
FILE: tests/AnnotSV/test_29_distNearestSS/input/test5.bed
================================================
2	170343650	170344315	DEL


================================================
FILE: tests/AnnotSV/test_29_distNearestSS/input/test6.bed
================================================
11	7716419	7716800	DEL


================================================
FILE: tests/AnnotSV/test_30_Ranking/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"



###################################
# Annotation method used in AnnotSV
###################################

# In each section, only 1 criterion (from the most pathogenic to the least) is assigned.

# Example in the section 2:
###########################
# https://github.com/lgmgeo/AnnotSV/issues/41
# https://github.com/lgmgeo/AnnotSV/issues/40

# 1_108190708_108194629_DEL

# In the following example, criterion 2F is filled but not assigned because criterion 2C-1 is filled and more pathogenic.

# 2C-1
# => The SLC25A24 gene is an OMIM morbid gene. 
# => Regarding the DEL used as input, the 2C-1 criteria is verified (coding sequence of the morbid gene is involved).

# 2F: Completely contained within an established benign CNV region.

mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -svtBEDcol 4 -genomeBuild GRCh38 -outputFile "./output/test_tcl.annotated.tsv"

# $cut "./output/test_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class"
# AnnotSV_ID      Annotation_mode AnnotSV_ranking_score   AnnotSV_ranking_criteria        ACMG_class
# 1_108190709_108194629_DEL_1     full    0.9     1A (cf Gene_count, RE_gene, +0.00);2C-1 (SLC25A24, +0.90);3A (1 gene, +0.00);5F (+0.00) 4
# 1_108190709_108194629_DEL_1     split                   full=4

annotations=`$cut "./output/test_tcl.annotated.tsv" "Annotation_mode;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class" | egrep -v "full=|AnnotSV_ranking_criteria"` 

if [ `echo $annotations | grep -c "full 0.9 1A (cf Gene_count, RE_gene, +0.00);2C-1 (SLC25A24, +0.90);3A (1 gene, +0.00);5F (+0.00) 4"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: Dist_nearest_SS and Nearest_SS_type values for NM_001037668 are not correct (test1)"
        exit 1
fi


echo "ok - Finished"




================================================
FILE: tests/AnnotSV/test_30_Ranking/input/test.bed
================================================
1	108190708	108194629	DEL


================================================
FILE: tests/AnnotSV/test_31_Cytoband/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


# Integration of cytoband annotations:
######################################

# Request sur GitHub:
# https://github.com/lgmgeo/AnnotSV/issues/52

# Input SV
# chr17	1	18960000	DEL

# GRCh37 cytoband file:
# grep "^17" $ANNOTSV/share/AnnotSV/Annotations_Human/AnyOverlap/CytoBand/GRCh37/cytoBand_GRCh37.formatted.sorted.bed | head -5
# chr17   0       3300000 p13.3   gneg
# chr17   3300000 6500000 p13.2   gpos50
# chr17   6500000 10700000        p13.1   gneg
# chr17   10700000        16000000        p12     gpos75
# chr17   16000000        22200000        p11.2   gneg

# Expected annotation:
# p13.3-p11.2


# GRCh37:
#########
mkdir -p ./output
rm -f "./output/test.GRCh37_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -svtBEDcol 4 -outputFile "./output/test.GRCh37_tcl.annotated.tsv" -overlap 1 -genomeBuild GRCh37

# $cut "./output/test.GRCh37_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;CytoBand" | gr full
# 17_1_18960000_DEL_1     full    p13.3-p11.2
annotations=`$cut "./output/test.GRCh37_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;CytoBand" | grep full`
if [ `echo $annotations | grep -c "p13.3-p11.2"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: cytoband annotations are not correct (GRCh37)"
        exit 1
fi


# GRCh38:
#########
rm -f "./output/test.GRCh38_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -svtBEDcol 4 -outputFile "./output/test.GRCh38_tcl.annotated.tsv" -overlap 1 -genomeBuild GRCh38

# $cut "./output/test.GRCh38_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;CytoBand" | gr full
# 17_1_18960000_DEL_1     full    p13.3-p11.2
annotations=`$cut "./output/test.GRCh38_tcl.annotated.tsv" "AnnotSV_ID;Annotation_mode;CytoBand" | grep full`
if [ `echo $annotations | grep -c "p13.3-p11.2"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: cytoband annotations are not correct (GRCh38)"
        exit 1
fi


echo "ok - Finished"




================================================
FILE: tests/AnnotSV/test_31_Cytoband/input/test.bed
================================================
chr17	1	18960000	DEL


================================================
FILE: tests/AnnotSV/test_32_metrics/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}


# Option "-metrics": changing numerical values from frequencies to us or fr metrics (e.g. 0.2 or 0,2)
# us: 0.2
# fr: 0,2
# WARNING: If the "-metrics" option is set to "fr", this should not affect the ranking


## Checking: 
## - The "." are replaced with ","
## - The ranking stay the same



# -metrics "us" (default)
#########################
mkdir -p ./output
rm -f "./output/output.us_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input.bed" -SVinputInfo 1 -outputFile "./output/output.us_tcl.annotated.tsv" -svtbedcol 4 -genomeBuild GRCh37

# $cut "./output/output.us_tcl.annotated.tsv" "B_gain_AFmax;B_loss_AFmax;B_ins_AFmax;B_inv_AFmax;GC_content_left;DDD_HI_percent;ExAC_synZ;GnomAD_pLI;ExAC_pLI;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class"
# B_gain_AFmax    B_loss_AFmax    B_ins_AFmax     B_inv_AFmax     GC_content_left DDD_HI_percent  ExAC_synZ       GnomAD_pLI      ExAC_pLI        AnnotSV_ranking_score   AnnotSV_ranking_criteria        ACMG_class
# 0.01    0.0927          0.1667  0.340   0.27    -2.65362022636097       1.0000e+00      1.0000e+00      0.9     1A (cf Gene_count, RE_gene, +0.00);2C-1 (DMD, +0.90);3A (1 gene, +0.00);5F (+0.00)      4
# 0.01    0.0927          0.1667          0.27    -2.65362022636097       1.0000e+00      1.0000e+00                      full=4
#         0.0237          0.0845  0.435   4.17    0.0512652381981393      9.9443e-01      9.9912e-01      0.15    1A (cf Gene_count, RE_gene, +0.00);2H (DIAPH2, +0.15);3A (1 gene, +0.00);5F (+0.00)     3
#         0.0237          0.0845          4.17    0.0512652381981393      9.9443e-01      9.9912e-01                      full=3


for v in `$cut "./output/output.us_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "3 4 ACMG_class full=3 full=4" " " "$v"
        then
                echo "Error with the ranking (-metrics us)"
                echo "error 1"
                exit 1
        fi
done

annotations=`$cut "./output/output.us_tcl.annotated.tsv" "B_gain_AFmax;B_loss_AFmax;B_ins_AFmax;B_inv_AFmax;GC_content_left;DDD_HI_percent;ExAC_synZ;GnomAD_pLI;ExAC_pLI;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class" | grep -v "full="`

if [ `echo $annotations | tr " " "\n" | grep -c "[0-9]\\.[0-9]"` -gt 0 ] 
then
	if [ `echo $annotations | tr " " "\n" | grep -c "[0-9]\\,[0-9]"` -eq 0 ]
	then
        echo "Ok"
	else
        echo "error 1: Error with the ranking (-metrics us)"
        exit 1
	fi
fi



# -metrics "fr"
###############
rm -f "./output/output.fr_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input.bed" -SVinputInfo 1 -metrics fr -outputFile "./output/output.fr_tcl.annotated.tsv" -svtbedcol 4 -genomeBuild GRCh37

# $cut "./output/output.fr_tcl.annotated.tsv" "B_gain_AFmax;B_loss_AFmax;B_ins_AFmax;B_inv_AFmax;GC_content_left;DDD_HI_percent;ExAC_synZ;GnomAD_pLI;ExAC_pLI;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class"
# B_gain_AFmax    B_loss_AFmax    B_ins_AFmax     B_inv_AFmax     GC_content_left DDD_HI_percent  ExAC_synZ       GnomAD_pLI      ExAC_pLI        AnnotSV_ranking_score   AnnotSV_ranking_criteria        ACMG_class
# 0,01    0,0927          0,1667  0,340   0,27    -2,65362022636097       1,0     1,0     0,9     1A (cf Gene_count, RE_gene, +0.00);2C-1 (DMD, +0.90);3A (1 gene, +0.00);5F (+0.00)      4
# 0,01    0,0927          0,1667          0,27    -2,65362022636097       1,0     1,0                     full=4
#         0,0237          0,0845  0,435   4,17    0,0512652381981393      0,99443 0,99912 0,15    1A (cf Gene_count, RE_gene, +0.00);2H (DIAPH2, +0.15);3A (1 gene, +0.00);5F (+0.00)     3
#         0,0237          0,0845          4,17    0,0512652381981393      0,99443 0,99912                 full=3


for v in `$cut "./output/output.fr_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "3 4 ACMG_class full=3 full=4" " " "$v"
        then
                echo "Error with the ranking (-metrics fr)"
                echo "error 1"
                exit 1
        fi
done

annotations=`$cut "./output/output.fr_tcl.annotated.tsv" "B_gain_AFmax;B_loss_AFmax;B_ins_AFmax;B_inv_AFmax;GC_content_left;DDD_HI_percent;ExAC_synZ;GnomAD_pLI;ExAC_pLI;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class" | grep -v "full="`

if [ `echo $annotations | tr " " "\n" | grep -c "[0-9]\\.[0-9]"` -eq 0 ]
then
	if [ `echo $annotations | tr " " "\n" | grep -c "[0-9]\\,[0-9]"` -gt 0 ]
	then
        echo "Ok"
	else
        echo "error 1: Error with the ranking (-metrics fr)"
        exit 1
	fi
fi



echo "ok - Finished"





================================================
FILE: tests/AnnotSV/test_32_metrics/input/input.bed
================================================
X	96619122	96623156	DEL
X	32430304	32431577	DEL


================================================
FILE: tests/AnnotSV/test_33_webSiteExample/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}



# Test of the BED file example available at the AnnotSV website (=/home/geoffroy/www/AnnotSV/web/Documentation/test.bed)
########################################################################################################################

mkdir -p ./output
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -SVinputInfo 1 -outputFile "./output/test_tcl.annotated.tsv" -svtBEDcol 4 -genomeBuild GRCh37

# Look at the last column of the file (SV ranking) and check that there is no shift:

for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 3 4 5 ACMG_class full=1 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "Error with the BED file example available at the AnnotSV website: shift in the ranking"
                echo "error 1"
                exit 1
        fi
done



echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_33_webSiteExample/input/test.bed
================================================
# chrom	Start	End	Variant_type	Samples_ID	Biologist_annotation	Biologist_ranking
4	71552	9371067	DEL	sample1	4p-syndrom	Pathogenic
5	723194	777000	DUP sample1		Benign
7	110276505	110478039	INS sample1		NA
11	66287088	66288847	DEL sample1	BBS1_internal_frameshift	Pathogenic
15	34735949	34806953	DEL sample1		Benign
16	1565629	1571297	DUP	sample1	IFT140_tandem_duplication	Pathogenic


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/README
================================================
cd $ANNOTSV/tests/data/test_37_bracketedToAngularNotations/input/


A same SV is described with different notations:
- square-bracketed notation in VCF
- angle-bracketed notation in VCF
- BED format

=> We should obtain equivalent results for each SV type


# VCF with square-bracketed notation
####################################

ll input-square-bracketed-*vcf
-rwx------ 1 geoffroy lgm  275 Mar 23 13:35 input-square-bracketed-del_1.vcf
-rwx------ 1 geoffroy lgm  345 Mar 23 13:35 input-square-bracketed-del_partial_pass.vcf
-rwx------ 1 geoffroy lgm  307 Mar 23 13:35 input-square-bracketed-del_unordered.vcf
-rwx------ 1 geoffroy lgm  263 Mar 23 13:35 input-square-bracketed-dup.vcf
-rwx------ 1 geoffroy lgm  273 Mar 23 13:35 input-square-bracketed-empty_del.vcf
-rwx------ 1 geoffroy lgm  283 Mar 23 13:35 input-square-bracketed-ins_by_gridss.vcf
-rwx------ 1 geoffroy lgm  271 Mar 23 13:35 input-square-bracketed-inv1.vcf
-rw-r--r-- 1 geoffroy lgm  271 May 30 15:44 input-square-bracketed-inv2.vcf
-rw-r--r-- 1 geoffroy lgm 3851 May 30 16:06 input-square-bracketed-inv3.vcf
-rwxr-xr-x 1 geoffroy lgm 1845 Mar 23 13:35 input-square-bracketed-tra1.vcf
-rwx------ 1 geoffroy lgm  263 Mar 23 13:35 input-square-bracketed-tra2.vcf


# VCF with angle-bracketed notation
###################################
ll input-angle-bracketed-*vcf
-rwx------ 1 geoffroy lgm 160 Mar 23 13:35 input-angle-bracketed-del_1.vcf
-rwx------ 1 geoffroy lgm 195 Mar 23 13:35 input-angle-bracketed-del_partial_pass.vcf
-rwx------ 1 geoffroy lgm 154 Mar 23 13:35 input-angle-bracketed-dup.vcf
-rwx------ 1 geoffroy lgm 159 Mar 23 13:35 input-angle-bracketed-empty_del.vcf
-rwx------ 1 geoffroy lgm 137 Mar 23 13:35 input-angle-bracketed-ins_by_gridss.vcf
-rwx------ 1 geoffroy lgm 159 Mar 23 13:35 input-angle-bracketed-inv1.vcf
-rwx------ 1 geoffroy lgm 159 Mar 23 13:35 input-angle-bracketed-inv2.vcf
-rwxr-xr-x 1 geoffroy lgm 201 Mar 23 13:35 input-angle-bracketed-tra1.vcf
-rwx------ 1 geoffroy lgm 250 Mar 23 13:35 input-angle-bracketed-tra2.vcf


# BED with "DEL/DUP/INV..." notations
#####################################
ll *bed
-rwx------ 1 geoffroy lgm 34 Mar 23 13:35 input-del_1.bed
-rwx------ 1 geoffroy lgm 45 Mar 23 13:35 input-del_partial_pass.bed
-rwx------ 1 geoffroy lgm 31 Mar 23 13:35 input-dup.bed
-rwx------ 1 geoffroy lgm 37 Mar 23 13:35 input-empty_del.bed
-rwx------ 1 geoffroy lgm 54 Mar 23 13:35 input-ins_by_gridss.bed
-rwx------ 1 geoffroy lgm 33 Mar 23 13:35 input-inv1.bed
-rwx------ 1 geoffroy lgm 33 Mar 23 13:35 input-inv2.bed
-rwxr-xr-x 1 geoffroy lgm 53 Mar 23 13:35 input-tra1.bed




================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Difficult/README
================================================
Rodrigo:
I have attached two VCF files named "test" and "test_difficult". 
Both are valid VCF files and contain the same variants. 
However, the "test_difficult" does not have the correct output in AnnotSV. 
I don't want to split hairs here, so the only one that I find troublesome is the TRA because it is missing the other breakend annotation.


Véro:
Regarding your test_difficile.vcf, my feeling is different and undecided. 
I'm not sure it's a good idea to add a missing breakend, because in some cases the features of each breakend are different for an SV, especially the GT.




================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Difficult/test.vcf
================================================
##fileformat=VCFv4.1
##contig=<ID=1,length=249250621>
##contig=<ID=2,length=243199373>
##contig=<ID=3,length=198022430>
##contig=<ID=4,length=191154276>
##contig=<ID=5,length=180915260>
##contig=<ID=6,length=171115067>
##contig=<ID=7,length=159138663>
##contig=<ID=8,length=146364022>
##contig=<ID=9,length=141213431>
##contig=<ID=10,length=135534747>
##contig=<ID=11,length=135006516>
##contig=<ID=12,length=133851895>
##contig=<ID=13,length=115169878>
##contig=<ID=14,length=107349540>
##contig=<ID=15,length=102531392>
##contig=<ID=16,length=90354753>
##contig=<ID=17,length=81195210>
##contig=<ID=18,length=78077248>
##contig=<ID=19,length=59128983>
##contig=<ID=20,length=63025520>
##contig=<ID=21,length=48129895>
##contig=<ID=22,length=51304566>
##contig=<ID=X,length=155270560>
##contig=<ID=Y,length=59373566>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Length of the SV">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of the SV">
##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=GENE,Number=.,Type=String,Description="Gene(s) overlap in breakpoint">
##INFO=<ID=CLUSTER,Number=.,Type=String,Description="IDs of other clustered breakpoints">
##INFO=<ID=EXTRA,Number=.,Type=String,Description="Extra info for testing">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	3000	breakend_dup_a	T	]2:5000]T	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b	GT	0/0	0/1
2	5000	breakend_dup_b	T	T[2:3000[	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a	GT	0/0	0/1
2	5000	shorthand_dup	T	<DUP>	.	PASS	END=5000;SVTYPE=BND;EXTRA=SHORTHAND_DUP	GT	0/0	0/1
3	2999	breakend_inv_1_a	T	T]3:5000]	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b	GT	0/0	0/1
3	5000	breakend_inv_1_b	T	[3:2999[T	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a	GT	0/0	0/1
3	3000	breakend_inv_2_a	T	[3:5001[T	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b	GT	0/0	0/1
3	5001	breakend_inv_2_b	T	T]3:3000]	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a	GT	0/0	0/1
3	3000	complete_inv	T	<INV>	.	PASS	SVTYPE=INV;END=5000;EXTRA=INV_SHORTHAND	GT	0/0	0/1
17	198982	tra_no_mateid_a	A	A]2:321681]	.	PASS	SVTYPE=BND;EXTRA=TRA_PAIRED_WITHOUT_MATE_ID	GT	0/0	0/1
2	321681	tra_no_mateid_b	G	G]17:198982]	.	PASS	SVTYPE=BND;EXTRA=TRA_PAIRED_WITHOUT_MATE_ID	GT	0/0	0/1
12	3000	breakend_del_1_a	T	T[12:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b	GT	0/0	0/1
12	5000	breakend_del_1_b	T	]12:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a	GT	0/0	0/1
12	3000	shorthand_del	T	<DEL>	.	PASS	SVTYPE=DEL;END=5000;EXTRA=DEL_SHORTHAND	GT	0/0	0/1
22	5000	breakend_del_unordered_b	T	]22:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a	GT	0/0	0/1
15	5000	breakend_del_partial_pass_a	T	]15:3000]T	.	FAIL	SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b	GT	0/0	0/1
15	3000	breakend_del_partial_pass_b	T	T[15:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a	GT	0/0	0/1
13	53040041	ins_by_gridss	T	TATATATATACACAC[13:53040042[	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1
13	53040042	ins_by_gridss	A	]13:53040041]ATATATATACACACA	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1
15	53040041	empty_del_a	T	T[15:53040042[	.	PASS	SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b	GT	0/0	0/1
15	53040042	empty_del_b	A	]15:53040041]A	.	PASS	SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a	GT	0/0	0/1
22	3000	breakend_del_unordered_a	T	T[22:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Difficult/test_difficult.vcf
================================================
##fileformat=VCFv4.1
##contig=<ID=1,length=249250621>
##contig=<ID=2,length=243199373>
##contig=<ID=3,length=198022430>
##contig=<ID=4,length=191154276>
##contig=<ID=5,length=180915260>
##contig=<ID=6,length=171115067>
##contig=<ID=7,length=159138663>
##contig=<ID=8,length=146364022>
##contig=<ID=9,length=141213431>
##contig=<ID=10,length=135534747>
##contig=<ID=11,length=135006516>
##contig=<ID=12,length=133851895>
##contig=<ID=13,length=115169878>
##contig=<ID=14,length=107349540>
##contig=<ID=15,length=102531392>
##contig=<ID=16,length=90354753>
##contig=<ID=17,length=81195210>
##contig=<ID=18,length=78077248>
##contig=<ID=19,length=59128983>
##contig=<ID=20,length=63025520>
##contig=<ID=21,length=48129895>
##contig=<ID=22,length=51304566>
##contig=<ID=X,length=155270560>
##contig=<ID=Y,length=59373566>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Length of the SV">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of the SV">
##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=GENE,Number=.,Type=String,Description="Gene(s) overlap in breakpoint">
##INFO=<ID=CLUSTER,Number=.,Type=String,Description="IDs of other clustered breakpoints">
##INFO=<ID=EXTRA,Number=.,Type=String,Description="Extra info for testing">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	5000	breakend_dup_b	T	T[2:3000[	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a	GT	0/0	0/1
2	5000	shorthand_dup	T	<DUP>	.	PASS	END=5000;SVTYPE=BND;EXTRA=SHORTHAND_DUP	GT	0/0	0/1
3	5000	breakend_inv_1_b	T	[3:2999[T	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a	GT	0/0	0/1
3	5001	breakend_inv_2_b	T	T]3:3000]	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a	GT	0/0	0/1
3	3000	complete_inv	T	<INV>	.	PASS	SVTYPE=INV;END=5000;EXTRA=INV_SHORTHAND	GT	0/0	0/1
2	321681	tra_no_mateid_b	G	G]17:198982]	.	PASS	SVTYPE=BND;EXTRA=TRA_PAIRED_WITHOUT_MATE_ID	GT	0/0	0/1
12	5000	breakend_del_1_b	T	]12:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a	GT	0/0	0/1
12	3000	shorthand_del	T	<DEL>	.	PASS	SVTYPE=DEL;END=5000;EXTRA=DEL_SHORTHAND	GT	0/0	0/1
22	5000	breakend_del_unordered_b	T	]22:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a	GT	0/0	0/1
15	5000	breakend_del_partial_pass_a	T	]15:3000]T	.	FAIL	SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b	GT	0/0	0/1
13	53040042	ins_by_gridss	A	]13:53040041]ATATATATACACACA	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1
15	53040042	empty_del_b	A	]15:53040041]A	.	PASS	SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Outputs/command_20_square-bracketed-inv2.annotated.tsv
================================================
AnnotSV_ID	SV_chrom	SV_start	SV_end	SV_length	SV_type	Samples_ID	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR	Annotation_mode	CytoBand	Gene_name	Gene_count	Tx	Tx_start	Tx_end	Overlapped_tx_length	Overlapped_CDS_length	Overlapped_CDS_percent	Frameshift	Exon_count	Location	Location2	Dist_nearest_SS	Nearest_SS_type	Intersect_start	Intersect_end	RE_gene	P_gain_phen	P_gain_hpo	P_gain_source	P_gain_coord	P_loss_phen	P_loss_hpo	P_loss_source	P_loss_coord	P_ins_phen	P_ins_hpo	P_ins_source	P_ins_coord	po_P_gain_phen	po_P_gain_hpo	po_P_gain_source	po_P_gain_coord	po_P_gain_percent	po_P_loss_phen	po_P_loss_hpo	po_P_loss_source	po_P_loss_coord	po_P_loss_percent	P_snvindel_nb	P_snvindel_phen	B_gain_source	B_gain_coord	B_gain_AFmax	B_loss_source	B_loss_coord	B_loss_AFmax	B_ins_source	B_ins_coord	B_ins_AFmax	B_inv_source	B_inv_coord	B_inv_AFmax	po_B_gain_allG_source	po_B_gain_allG_coord	po_B_gain_someG_source	po_B_gain_someG_coord	po_B_loss_allG_source	po_B_loss_allG_coord	po_B_loss_someG_source	po_B_loss_someG_coord	Cosmic_ID	Cosmic_mut_typ	GC_content_left	GC_content_right	Repeat_coord_left	Repeat_type_left	Repeat_coord_right	Repeat_type_right	Gap_left	Gap_right	SegDup_left	SegDup_right	ENCODE_blacklist_left	ENCODE_blacklist_characteristics_left	ENCODE_blacklist_right	ENCODE_blacklist_characteristics_right	ACMG	HI	TS	DDD_HI_percent	ExAC_delZ	ExAC_dupZ	ExAC_cnvZ	ExAC_synZ	ExAC_misZ	GenCC_disease	GenCC_moi	GenCC_classification	GenCC_pmid	OMIM_ID	OMIM_phenotype	OMIM_inheritance	OMIM_morbid	OMIM_morbid_candidate	LOEUF_bin	GnomAD_pLI	ExAC_pLI	AnnotSV_ranking_score	AnnotSV_ranking_criteria	ACMG_class
3_3000_5001_INV_1	3	3000	5001	2001	INV	TUMOR	breakend_inv_2_b	N	<INV>	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a;BNDrescue	GT	0/0	0/1	full	p26.3		0																																																														0.000 (200 N)	0.000 (200 N)					3:1-10000	3:1-10000			3:1-11600	High Signal Region	3:1-11600	High Signal Region																								NA


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Outputs/input_OnlyTheReciprocalBND_square-bracketed-tra1_1.annotated.tsv
================================================
AnnotSV_ID	SV_chrom	SV_start	SV_end	SV_length	SV_type	Samples_ID	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR	Annotation_mode	CytoBand	Gene_name	Gene_count	Tx	Tx_start	Tx_end	Overlapped_tx_length	Overlapped_CDS_length	Overlapped_CDS_percent	Frameshift	Exon_count	Location	Location2	Dist_nearest_SS	Nearest_SS_type	Intersect_start	Intersect_end	RE_gene	P_gain_phen	P_gain_hpo	P_gain_source	P_gain_coord	P_loss_phen	P_loss_hpo	P_loss_source	P_loss_coord	P_ins_phen	P_ins_hpo	P_ins_source	P_ins_coord	po_P_gain_phen	po_P_gain_hpo	po_P_gain_source	po_P_gain_coord	po_P_gain_percent	po_P_loss_phen	po_P_loss_hpo	po_P_loss_source	po_P_loss_coord	po_P_loss_percent	P_snvindel_nb	P_snvindel_phen	B_gain_source	B_gain_coord	B_gain_AFmax	B_loss_source	B_loss_coord	B_loss_AFmax	B_ins_source	B_ins_coord	B_ins_AFmax	B_inv_source	B_inv_coord	B_inv_AFmax	po_B_gain_allG_source	po_B_gain_allG_coord	po_B_gain_someG_source	po_B_gain_someG_coord	po_B_loss_allG_source	po_B_loss_allG_coord	po_B_loss_someG_source	po_B_loss_someG_coord	Cosmic_ID	Cosmic_mut_typ	GC_content_left	GC_content_right	Repeat_coord_left	Repeat_type_left	Repeat_coord_right	Repeat_type_right	Gap_left	Gap_right	SegDup_left	SegDup_right	ENCODE_blacklist_left	ENCODE_blacklist_characteristics_left	ENCODE_blacklist_right	ENCODE_blacklist_characteristics_right	ACMG	HI	TS	DDD_HI_percent	ExAC_delZ	ExAC_dupZ	ExAC_cnvZ	ExAC_synZ	ExAC_misZ	GenCC_disease	GenCC_moi	GenCC_classification	GenCC_pmid	OMIM_ID	OMIM_phenotype	OMIM_inheritance	OMIM_morbid	OMIM_morbid_candidate	LOEUF_bin	GnomAD_pLI	ExAC_pLI	AnnotSV_ranking_score	AnnotSV_ranking_criteria	ACMG_class
13_123456_123456_TRA_1	13	123456	123456	0	TRA	TUMOR	tra_a	N	<TRA>	.	PASS	SVTYPE=BND;BNDrescue	GT	0/0	0/1	full	p13		0																																																														0.000 (200 N)	0.000 (200 N)					13:10001-16000000	13:10001-16000000																														NA
2_321682_321682_TRA_1	2	321682	321682	0	TRA	TUMOR	tra_a	T	]13:123456]T	.	PASS	SVTYPE=BND	GT	0/0	0/1	full	p25.3	LINC01865	1																														dbVar:nssv15161672;dbVar:nssv15161098;dbVar:nssv15161566;dbVar:nssv15152820;dbVar:nssv15775408;nssv15775409;dbVar:nssv15161685;nssv15161863;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv15161093;dbVar:nssv15161076;dbVar:nssv15138133;dbVar:nssv15136679;dbVar:nssv15161534;dbVar:nssv15122991;dbVar:nssv15133088;dbVar:nssv15139535;dbVar:nssv15161739;dbVar:nssv15119871;dbVar:nssv15161279;dbVar:nssv15161375	2:12771-19881713;2:12771-25039694;2:12771-33711509;2:12771-4776035;2:12771-7362665;2:12772-241841232;2:14239-242106609;2:15673-242157305;2:17020-20001056;2:17020-26318846;2:17020-4957745;2:24401-817581;2:30342-28419664;2:30342-4642399;2:30342-4932359;2:30342-507042;2:30343-14866951;2:50662-9652907;2:66098-55570637;2:236817-45983232	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dbVar:nssv17956024;dbVar:nssv15138126;dbVar:nssv15776261;dbVar:nssv15138226;dbVar:nssv15775014;dbVar:nssv16207779;dbVar:nssv15134632;dbVar:nssv15138552;dbVar:nssv15133933;dbVar:nssv15136368;dbVar:nssv15133613;dbVar:nssv15136209;dbVar:nssv15119947;dbVar:nssv15137919	2:10502-2383145;2:12771-2310816;2:12771-2345104;2:12771-2748672;2:12771-2829122;2:12771-2997182;2:17020-1645317;2:17020-2305267;2:30342-1969402;2:30342-2656139;2:30342-3449132;2:39194-1542734;2:50662-3293835;2:131731-2713517	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00																									0.450	0.450																																				NA
2_321682_321682_TRA_1	2	321682	321682	0	TRA	TUMOR	tra_a	T	]13:123456]T	.	PASS	SVTYPE=BND	GT	0/0	0/1	split	p25.3	LINC01865		NR_146953	316283	337054	1	0	0	no	4	intron2-exon3	UTR	0	3'	321681	321682																																																																																					full=NA


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Outputs/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.annotated.tsv
================================================
AnnotSV_ID	SV_chrom	SV_start	SV_end	SV_length	SV_type	Samples_ID	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR	Annotation_mode	CytoBand	Gene_name	Gene_count	Tx	Tx_start	Tx_end	Overlapped_tx_length	Overlapped_CDS_length	Overlapped_CDS_percent	Frameshift	Exon_count	Location	Location2	Dist_nearest_SS	Nearest_SS_type	Intersect_start	Intersect_end	RE_gene	P_gain_phen	P_gain_hpo	P_gain_source	P_gain_coord	P_loss_phen	P_loss_hpo	P_loss_source	P_loss_coord	P_ins_phen	P_ins_hpo	P_ins_source	P_ins_coord	po_P_gain_phen	po_P_gain_hpo	po_P_gain_source	po_P_gain_coord	po_P_gain_percent	po_P_loss_phen	po_P_loss_hpo	po_P_loss_source	po_P_loss_coord	po_P_loss_percent	P_snvindel_nb	P_snvindel_phen	B_gain_source	B_gain_coord	B_gain_AFmax	B_loss_source	B_loss_coord	B_loss_AFmax	B_ins_source	B_ins_coord	B_ins_AFmax	B_inv_source	B_inv_coord	B_inv_AFmax	po_B_gain_allG_source	po_B_gain_allG_coord	po_B_gain_someG_source	po_B_gain_someG_coord	po_B_loss_allG_source	po_B_loss_allG_coord	po_B_loss_someG_source	po_B_loss_someG_coord	Cosmic_ID	Cosmic_mut_typ	GC_content_left	GC_content_right	Repeat_coord_left	Repeat_type_left	Repeat_coord_right	Repeat_type_right	Gap_left	Gap_right	SegDup_left	SegDup_right	ENCODE_blacklist_left	ENCODE_blacklist_characteristics_left	ENCODE_blacklist_right	ENCODE_blacklist_characteristics_right	ACMG	HI	TS	DDD_HI_percent	ExAC_delZ	ExAC_dupZ	ExAC_cnvZ	ExAC_synZ	ExAC_misZ	GenCC_disease	GenCC_moi	GenCC_classification	GenCC_pmid	OMIM_ID	OMIM_phenotype	OMIM_inheritance	OMIM_morbid	OMIM_morbid_candidate	LOEUF_bin	GnomAD_pLI	ExAC_pLI	AnnotSV_ranking_score	AnnotSV_ranking_criteria	ACMG_class
13_123456_123456_TRA_1	13	123456	123456	0	TRA	TUMOR	tra_b	C	C[2:321682[	.	PASS	SVTYPE=BND	GT	0/0	0/1	full	p13		0																																																														0.000 (200 N)	0.000 (200 N)					13:10001-16000000	13:10001-16000000																														NA
2_321682_321682_TRA_1	2	321682	321682	0	TRA	TUMOR	tra_b	N	<TRA>	.	PASS	SVTYPE=BND;BNDrescue	GT	0/0	0/1	full	p25.3	LINC01865	1																														dbVar:nssv15161672;dbVar:nssv15161098;dbVar:nssv15161566;dbVar:nssv15152820;dbVar:nssv15775408;nssv15775409;dbVar:nssv15161685;nssv15161863;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv15161093;dbVar:nssv15161076;dbVar:nssv15138133;dbVar:nssv15136679;dbVar:nssv15161534;dbVar:nssv15122991;dbVar:nssv15133088;dbVar:nssv15139535;dbVar:nssv15161739;dbVar:nssv15119871;dbVar:nssv15161279;dbVar:nssv15161375	2:12771-19881713;2:12771-25039694;2:12771-33711509;2:12771-4776035;2:12771-7362665;2:12772-241841232;2:14239-242106609;2:15673-242157305;2:17020-20001056;2:17020-26318846;2:17020-4957745;2:24401-817581;2:30342-28419664;2:30342-4642399;2:30342-4932359;2:30342-507042;2:30343-14866951;2:50662-9652907;2:66098-55570637;2:236817-45983232	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dbVar:nssv17956024;dbVar:nssv15138126;dbVar:nssv15776261;dbVar:nssv15138226;dbVar:nssv15775014;dbVar:nssv16207779;dbVar:nssv15134632;dbVar:nssv15138552;dbVar:nssv15133933;dbVar:nssv15136368;dbVar:nssv15133613;dbVar:nssv15136209;dbVar:nssv15119947;dbVar:nssv15137919	2:10502-2383145;2:12771-2310816;2:12771-2345104;2:12771-2748672;2:12771-2829122;2:12771-2997182;2:17020-1645317;2:17020-2305267;2:30342-1969402;2:30342-2656139;2:30342-3449132;2:39194-1542734;2:50662-3293835;2:131731-2713517	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00																									0.450	0.450																																				NA
2_321682_321682_TRA_1	2	321682	321682	0	TRA	TUMOR	tra_b	N	<TRA>	.	PASS	SVTYPE=BND;BNDrescue	GT	0/0	0/1	split	p25.3	LINC01865		NR_146953	316283	337054	1	0	0	no	4	intron2-exon3	UTR	0	3'	321681	321682																																																																																					full=NA


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/README
================================================
# Mail de Rodrigo Martin le 07/02/2023
######################################

I have attached to this email the VCF file that I used for my tests and the output generated by my tool in CSV format. 

The breakend notated variants (with the square brackets []) are paired, that means that the reciprocal breakend is also present in the VCF file (they are usually paired using their MATEID property in the INFO field). Note that even though they appear as two "variants", they represent the same biological variant and should be treated as such (you can see that my tool only outputs one variant, even if it comes from two paired breakends).
 

# Fichier test de Rodrigo :
###########################

ll $ANNOTSV/tests//data//test_37_bracketedToAngularNotations/Rodrigo_tests_ignore/
drwxr-xr-x 2 geoffroy lgm   75 Mar 23 13:35 Difficult
-rwx------ 1 geoffroy lgm 1093 Mar 23 13:35 output.csv
-rw-r--r-- 1 geoffroy lgm 1176 May 30 16:04 README
-rwx------ 1 geoffroy lgm 3747 Mar 23 13:35 severalSVTYPE-square-bracketed.vcf
-rwx------ 1 geoffroy lgm 4517 Mar 23 13:35 test_paired.vcf
-rw-r--r-- 1 geoffroy lgm  173 Mar 23 13:35 tra.output.csv
-rwx------ 1 geoffroy lgm 1923 Mar 23 13:35 tra.vcf


# Outil "variant-extractor" de Rodrigo : 
########################################

/maison/geoffroy/variant-extractor



=> On extrait les square-bracketed :
/gstock/LGM/analysisOfSV/AnnotSV/Test_AnnotSV/37_bracketedToAngularNotations/Rodrigo-tests/severalSVTYPE-square-bracketed.vcf

=> On crée un fichier VCF par SV (+ pratique pour les tests) :
ll input-square-bracketed-*vcf
-rwx------ 1 geoffroy lgm 275 Feb 28 14:31 input-square-bracketed-del_1.vcf
-rwx------ 1 geoffroy lgm 345 Feb 28 14:32 input-square-bracketed-del_partial_pass.vcf
-rwx------ 1 geoffroy lgm 307 Feb 28 14:31 input-square-bracketed-del_unordered.vcf
-rwx------ 1 geoffroy lgm 263 Feb 28 14:24 input-square-bracketed-dup.vcf
-rwx------ 1 geoffroy lgm 273 Feb 28 14:33 input-square-bracketed-empty_del.vcf
-rwx------ 1 geoffroy lgm 283 Feb 28 14:33 input-square-bracketed-ins_by_gridss.vcf
-rwx------ 1 geoffroy lgm 271 Feb 28 14:26 input-square-bracketed-inv1.vcf
-rwx------ 1 geoffroy lgm 271 Feb 28 14:26 input-square-bracketed-inv2.vcf
-rwx------ 1 geoffroy lgm 263 Feb 28 14:30 input-square-bracketed-tra1.vcf
-rwxr-xr-x 1 geoffroy lgm 181 Feb  9 18:06 input-square-bracketed-tra2.vcf

=> On crée les équivalents VCF en angle-bracketed
ll input-angle-bracketed-*vcf
-rwx------ 1 geoffroy lgm 160 Mar  3 15:23 input-angle-bracketed-del_1.vcf
-rwx------ 1 geoffroy lgm 195 Mar  3 15:00 input-angle-bracketed-del_partial_pass.vcf
-rwx------ 1 geoffroy lgm 154 Mar  3 15:01 input-angle-bracketed-dup.vcf
-rwx------ 1 geoffroy lgm 159 Mar  3 15:05 input-angle-bracketed-empty_del.vcf
-rwx------ 1 geoffroy lgm 137 Mar  3 15:05 input-angle-bracketed-ins_by_gridss.vcf
-rwx------ 1 geoffroy lgm 159 Mar  3 15:06 input-angle-bracketed-inv1.vcf
-rwx------ 1 geoffroy lgm 159 Mar  3 15:06 input-angle-bracketed-inv2.vcf
-rwxr-xr-x 1 geoffroy lgm 130 Mar  3 16:11 input-angle-bracketed-tra1.vcf
-rwx------ 1 geoffroy lgm 250 Mar  3 15:08 input-angle-bracketed-tra2.vcf

=> On crée les équivalents en BED
ll *bed
-rwx------ 1 geoffroy lgm 34 Mar  3 11:52 input-del_1.bed
-rwx------ 1 geoffroy lgm 45 Mar  3 11:53 input-del_partial_pass.bed
-rwx------ 1 geoffroy lgm 31 Mar  3 11:53 input-dup.bed
-rwx------ 1 geoffroy lgm 37 Mar  3 11:53 input-empty_del.bed
-rwx------ 1 geoffroy lgm 54 Mar  3 11:53 input-ins_by_gridss.bed
-rwx------ 1 geoffroy lgm 33 Mar  3 11:53 input-inv1.bed
-rwx------ 1 geoffroy lgm 33 Mar  3 11:53 input-inv2.bed
-rwxr-xr-x 1 geoffroy lgm 53 Mar  3 11:53 input-tra1.bed




================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/output.csv
================================================
id,start_chrom,start,end_chrom,end,ref,alt,length,brackets,type_inferred
snv,1,100,1,100,G,A,1,,SNV
multiallelic_0,1,1000,1,1000,G,C,1,,SNV
multiallelic_1,1,1000,1,1000,G,T,1,,SNV
mnp_0,1,1500,1,1500,G,A,1,,SNV
mnp_1,1,1501,1,1501,A,C,1,,SNV
normal_del,1,2000,1,2001,CT,C,1,N[,DEL
complex_del,1,2200,1,2206,CCTGAAA,CGA,6,N[,DEL
normal_ins,1,2100,1,2100,C,CAA,2,,INS
complex_ins,1,2300,1,2301,GT,CAATATATA,8,,INS
breakend_dup_a,2,3000,2,5000,T,]2:5000]T,2000,]N,DUP
shorthand_dup,2,5000,2,5000,T,<DUP>,0,]N,DUP
breakend_inv_1_a,3,2999,3,5000,T,T]3:5000],2001,N],INV
breakend_inv_2_a,3,3000,3,5001,T,[3:5001[T,2001,[N,INV
complete_inv_1,3,2999,3,5000,N,N]3:5000],2001,N],INV
complete_inv_2,3,3000,3,5001,T,[3:5001[T,2001,[N,INV
trn_no_mateid_b,2,321681,17,198982,G,G]17:198982],0,N]],TRN
breakend_del_1_a,12,3000,12,5000,T,T[12:5000[,2000,N[,DEL
shorthand_del,12,3000,12,5000,T,<DEL>,2000,N[,DEL
breakend_del_partial_pass_b,15,3000,15,5000,T,T[15:5000[,2000,N[,DEL
ins_by_gridss,13,53040041,13,53040041,T,TATATATATACACAC,14,,INS
breakend_del_unordered_a,22,3000,22,5000,T,T[22:5000[,2000,N[,DEL


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/severalSVTYPE-square-bracketed.vcf
================================================
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##contig=<ID=2,length=243199373>
##contig=<ID=3,length=198022430>
##contig=<ID=4,length=191154276>
##contig=<ID=5,length=180915260>
##contig=<ID=6,length=171115067>
##contig=<ID=7,length=159138663>
##contig=<ID=8,length=146364022>
##contig=<ID=9,length=141213431>
##contig=<ID=10,length=135534747>
##contig=<ID=11,length=135006516>
##contig=<ID=12,length=133851895>
##contig=<ID=13,length=115169878>
##contig=<ID=14,length=107349540>
##contig=<ID=15,length=102531392>
##contig=<ID=16,length=90354753>
##contig=<ID=17,length=81195210>
##contig=<ID=18,length=78077248>
##contig=<ID=19,length=59128983>
##contig=<ID=20,length=63025520>
##contig=<ID=21,length=48129895>
##contig=<ID=22,length=51304566>
##contig=<ID=X,length=155270560>
##contig=<ID=Y,length=59373566>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Length of the SV">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of the SV">
##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=GENE,Number=.,Type=String,Description="Gene(s) overlap in breakpoint">
##INFO=<ID=CLUSTER,Number=.,Type=String,Description="IDs of other clustered breakpoints">
##INFO=<ID=EXTRA,Number=.,Type=String,Description="Extra info for testing">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	3000	breakend_dup_a	T	]2:5000]T	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b	GT	0/0	0/1
2	5000	breakend_dup_b	T	T[2:3000[	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a	GT	0/0	0/1
3	2999	breakend_inv_1_a	T	T]3:5000]	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b	GT	0/0	0/1
3	5000	breakend_inv_1_b	T	[3:2999[T	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a	GT	0/0	0/1
3	3000	breakend_inv_2_a	T	[3:5001[T	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b	GT	0/0	0/1
3	5001	breakend_inv_2_b	T	T]3:3000]	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a	GT	0/0	0/1
17	198982	trn_no_mateid_a	A	A]2:321681]	.	PASS	SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID	GT	0/0	0/1
2	321681	trn_no_mateid_b	G	G]17:198982]	.	PASS	SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID	GT	0/0	0/1
12	3000	breakend_del_1_a	T	T[12:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b	GT	0/0	0/1
12	5000	breakend_del_1_b	T	]12:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a	GT	0/0	0/1
22	5000	breakend_del_unordered_b	T	]22:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a	GT	0/0	0/1
15	5000	breakend_del_partial_pass_a	T	]15:3000]T	.	FAIL	SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b	GT	0/0	0/1
15	3000	breakend_del_partial_pass_b	T	T[15:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a	GT	0/0	0/1
13	53040041	ins_by_gridss	T	TATATATATACACAC[13:53040042[	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1
13	53040042	ins_by_gridss	A	]13:53040041]ATATATATACACACA	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1
15	53040041	empty_del_a	T	T[15:53040042[	.	PASS	SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b	GT	0/0	0/1
15	53040042	empty_del_b	A	]15:53040041]A	.	PASS	SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a	GT	0/0	0/1
22	3000	breakend_del_unordered_a	T	T[22:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/test_paired.vcf
================================================
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##contig=<ID=5,length=180915260>
##contig=<ID=6,length=171115067>
##contig=<ID=7,length=159138663>
##contig=<ID=8,length=146364022>
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##contig=<ID=10,length=135534747>
##contig=<ID=11,length=135006516>
##contig=<ID=12,length=133851895>
##contig=<ID=13,length=115169878>
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##contig=<ID=16,length=90354753>
##contig=<ID=17,length=81195210>
##contig=<ID=18,length=78077248>
##contig=<ID=19,length=59128983>
##contig=<ID=20,length=63025520>
##contig=<ID=21,length=48129895>
##contig=<ID=22,length=51304566>
##contig=<ID=X,length=155270560>
##contig=<ID=Y,length=59373566>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Length of the SV">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of the SV">
##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=GENE,Number=.,Type=String,Description="Gene(s) overlap in breakpoint">
##INFO=<ID=CLUSTER,Number=.,Type=String,Description="IDs of other clustered breakpoints">
##INFO=<ID=EXTRA,Number=.,Type=String,Description="Extra info for testing">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
1	50	no_change	T	T	.	PASS	EXTRA=NO_CHANGE	GT	0/0	0/1
1	100	snv	G	A	.	PASS	EXTRA=DUMMY_SNV	GT	0/0	0/1
1	1000	multiallelic	G	C,T	.	PASS	EXTRA=SNV_MULTIALLELIC	GT:AD	0/0:162,6,8,3	0/1/2:237,9,16,6
1	1500	mnp	GAA	ACA	.	PASS	EXTRA=DUMMY_MNP	GT	0/0	0/1
1	2000	normal_del	CT	C	.	PASS	EXTRA=DUMMY_DEL	GT	0/0	0/1
1	2200	complex_del	CCTGAAA	CGA	.	PASS	EXTRA=DUMMY_COMPLEX_DEL	GT	0/0	0/1
1	2100	normal_ins	C	CAA	.	PASS	EXTRA=DUMMY_INS	GT	0/0	0/1
1	2300	complex_ins	GT	CAATATATA	.	PASS	EXTRA=DUMMY_COMPLEX_INS	GT	0/0	0/1
2	3000	breakend_dup_a	T	]2:5000]T	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b	GT	0/0	0/1
2	5000	breakend_dup_b	T	T[2:3000[	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a	GT	0/0	0/1
2	5000	shorthand_dup	T	<DUP>	.	PASS	END=5000;SVTYPE=BND;EXTRA=SHORTHAND_DUP	GT	0/0	0/1
3	2999	breakend_inv_1_a	T	T]3:5000]	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b	GT	0/0	0/1
3	5000	breakend_inv_1_b	T	[3:2999[T	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a	GT	0/0	0/1
3	3000	breakend_inv_2_a	T	[3:5001[T	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b	GT	0/0	0/1
3	5001	breakend_inv_2_b	T	T]3:3000]	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a	GT	0/0	0/1
3	3000	complete_inv	T	<INV>	.	PASS	SVTYPE=INV;END=5000;EXTRA=INV_SHORTHAND	GT	0/0	0/1
17	198982	trn_no_mateid_a	A	A]2:321681]	.	PASS	SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID	GT	0/0	0/1
2	321681	trn_no_mateid_b	G	G]17:198982]	.	PASS	SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID	GT	0/0	0/1
12	3000	breakend_del_1_a	T	T[12:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b	GT	0/0	0/1
12	5000	breakend_del_1_b	T	]12:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a	GT	0/0	0/1
12	3000	shorthand_del	T	<DEL>	.	PASS	SVTYPE=DEL;END=5000;EXTRA=DEL_SHORTHAND	GT	0/0	0/1
22	5000	breakend_del_unordered_b	T	]22:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a	GT	0/0	0/1
15	5000	breakend_del_partial_pass_a	T	]15:3000]T	.	FAIL	SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b	GT	0/0	0/1
15	3000	breakend_del_partial_pass_b	T	T[15:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a	GT	0/0	0/1
13	53040041	ins_by_gridss	T	TATATATATACACAC[13:53040042[	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1
13	53040042	ins_by_gridss	A	]13:53040041]ATATATATACACACA	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1
15	53040041	empty_del_a	T	T[15:53040042[	.	PASS	SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b	GT	0/0	0/1
15	53040042	empty_del_b	A	]15:53040041]A	.	PASS	SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a	GT	0/0	0/1
22	3000	breakend_del_unordered_a	T	T[22:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/tra.output.csv
================================================
id,start_chrom,start,end_chrom,end,ref,alt,length,brackets,type_inferred
tra_a,2,321682,13,123456,T,]13:123456]T,0,]]N,TRA
tra_b,2,321682,13,123456,N,]13:123456]N,0,]]N,TRA


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/tra.vcf
================================================
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##contig=<ID=2,length=243199373>
##contig=<ID=3,length=198022430>
##contig=<ID=4,length=191154276>
##contig=<ID=5,length=180915260>
##contig=<ID=6,length=171115067>
##contig=<ID=7,length=159138663>
##contig=<ID=8,length=146364022>
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##contig=<ID=11,length=135006516>
##contig=<ID=12,length=133851895>
##contig=<ID=13,length=115169878>
##contig=<ID=14,length=107349540>
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##contig=<ID=16,length=90354753>
##contig=<ID=17,length=81195210>
##contig=<ID=18,length=78077248>
##contig=<ID=19,length=59128983>
##contig=<ID=20,length=63025520>
##contig=<ID=21,length=48129895>
##contig=<ID=22,length=51304566>
##contig=<ID=X,length=155270560>
##contig=<ID=Y,length=59373566>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Length of the SV">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of the SV">
##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=GENE,Number=.,Type=String,Description="Gene(s) overlap in breakpoint">
##INFO=<ID=CLUSTER,Number=.,Type=String,Description="IDs of other clustered breakpoints">
##INFO=<ID=EXTRA,Number=.,Type=String,Description="Extra info for testing">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	321682	tra_a	T	]13:123456]T	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b	GT	0/0	0/1
13	123456	tra_b	C	C[2:321682[	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail

###################################################################
####                                                           ####
#### Compare square/angle-bracketed notations and BED notation ####
####                                                           ####
###################################################################

mkdir -p ./output
rm -f ./output/command_*.annotated.tsv
rm -f ./output/command_*.unannotated.tsv


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


# command_1: del_1
##################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-del_1.vcf" -outputFile "./output/command_1_square-bracketed-del_1.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-del_1.vcf" -outputFile "./output/command_1_angle-bracketed-del_1.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-del_1.bed" -svtBEDcol 5 -outputFile "./output/command_1_BED-del_1.annotated.tsv"

# tail -2 ./input/input-square-bracketed-del_1.vcf
# 12      3000    breakend_del_1_a        T       T[12:5000[      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b     GT      0/0     0/1
# 12      5000    breakend_del_1_b        T       ]12:3000]T      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a     GT      0/0     0/1
 
# tail -1 ./input/input-angle-bracketed-del_1.vcf
# 12      3000    breakend_del_1_a        T       <DEL>   .       PASS    END=5000;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b       GT      0/0     0/1

# tail -1 ./input/input-del_1.bed
# 12      2999    5000    breakend_del_1_a        DEL

# gr breakend_del_1_ Rodrigo_tests_ignore/output.csv
# breakend_del_1_a,12,3000,12,5000,T,T[12:5000[,2000,N[,DEL

squareResult=`$cut "./output/command_1_square-bracketed-del_1.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$squareResult" != "12_3000_5000_DEL_1 breakend_del_1_a 12 3000 5000 DEL T T[12:5000[ 3 " ]
then
        echo "error 1: Error with command_1 (square bad values)"
        exit 1
fi

echo "Command_1 (square) OK"

angleResult=`$cut "./output/command_1_angle-bracketed-del_1.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$angleResult" != "12_3000_5000_DEL_1 breakend_del_1_a 12 3000 5000 DEL T <DEL> 3 " ]
then
        echo "error 1: Error with command_1 (angle bad values)"
        exit 1
fi

echo "Command_1 (angle) OK"

BEDresult=`$cut "./output/command_1_BED-del_1.annotated.tsv" "AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6}'`
if [ "$BEDresult" != "12_3000_5000_DEL_1 12 3000 5000 DEL 3 " ]
then
        echo "error 1: Error with command_1 (BED bad values)"
        exit 1
fi

echo "Command_1 (BED) OK"



# command_2: del_partial_pass (unordered)
#########################################

$ANNOTSV/bin/AnnotSV -SVinputFile "input/input-square-bracketed-del_partial_pass.vcf" -outputFile "./output/command_2_square-bracketed-del_partial_pass.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "input/input-angle-bracketed-del_partial_pass.vcf" -outputFile "./output/command_2_angle-bracketed-del_partial_pass.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "input/input-del_partial_pass.bed" -svtBEDcol 5 -outputFile "./output/command_2_BED-del_partial_pass.annotated.tsv"

# tail -2 ./input/input-square-bracketed-del_partial_pass.vcf
# 15      5000    breakend_del_partial_pass_a     T       ]15:3000]T      .       FAIL    SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b     GT      0/0     0/1
# 15      3000    breakend_del_partial_pass_b     T       T[15:5000[      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a     GT      0/0     0/1

# tail -1 ./input/input-angle-bracketed-del_partial_pass.vcf
# 15      3000    breakend_del_partial_pass_b     T       <DEL>   .       PASS    EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a;END=5000       GT      0/0     0/1

# tail -1 ./input/input-del_partial_pass.bed
# 15      2999    5000    breakend_del_partial_pass_b     DEL

# gr breakend_del_partial_pass_ Rodrigo_tests_ignore/output.csv
# breakend_del_partial_pass_b,15,3000,15,5000,T,T[15:5000[,2000,N[,DEL

squareResult=`$cut "./output/command_2_square-bracketed-del_partial_pass.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$squareResult" != "15_3000_5000_DEL_1 breakend_del_partial_pass_b 15 3000 5000 DEL T T[15:5000[ 3 " ]
then
        echo "error 1: Error with command_2 (square bad values)"
        exit 1
fi

echo "Command_2 (square) OK"

angleResult=`$cut "./output/command_2_angle-bracketed-del_partial_pass.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$angleResult" != "15_3000_5000_DEL_1 breakend_del_partial_pass_b 15 3000 5000 DEL T <DEL> 3 " ]
then
        echo "error 1: Error with command_2 (angle bad values)"
        exit 1
fi

echo "Command_2 (angle) OK"

BEDresult=`$cut "./output/command_2_BED-del_partial_pass.annotated.tsv" "AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6}'`
if [ "$BEDresult" != "15_3000_5000_DEL_1 15 3000 5000 DEL 3 " ]
then
        echo "error 1: Error with command_2 (BED bad values)"
        exit 1
fi

echo "Command_2 (BED) OK"



# command_3: Square-bracketed del_unordered
###########################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-del_unordered.vcf" -outputFile "./output/command_3_square-bracketed-del_unordered.annotated.tsv"

# tail -2 ./input/input-square-bracketed-del_unordered.vcf
# 22      5000    breakend_del_unordered_b        T       ]22:3000]T      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a     GT      0/0     0/1
# 22      3000    breakend_del_unordered_a        T       T[22:5000[      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_b     GT      0/0     0/1

# gr breakend_del_unordered_ Rodrigo_tests_ignore/output.csv
# breakend_del_unordered_a,22,3000,22,5000,T,T[22:5000[,2000,N[,DEL


squareResult=`$cut "./output/command_3_square-bracketed-del_unordered.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$squareResult" != "22_3000_5000_DEL_1 breakend_del_unordered_a 22 3000 5000 DEL T T[22:5000[ 3 " ]
then
        echo "error 1: Error with command_3 (square bad values)"
        exit 1
fi

echo "Command_3 (square) OK"



# command_4: dup 
################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-dup.vcf" -outputFile "./output/command_4_square-bracketed-dup.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-dup.vcf" -outputFile "./output/command_4_angle-bracketed-dup.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-dup.bed" -svtBEDcol 5 -outputFile "./output/command_4_BED-dup.annotated.tsv"

# tail -2 ./input/input-square-bracketed-dup.vcf
# 2       3000    breakend_dup_a  T       ]2:5000]T       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b       GT      0/0     0/1
# 2       5000    breakend_dup_b  T       T[2:3000[       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a       GT      0/0     0/1

# tail -1 ./input/input-angle-bracketed-dup.vcf
# 2       3000    breakend_dup_a  T       <DUP>   .       PASS    END=5000EXTRA=DUP_PAIRED;MATEID=breakend_dup_b  GT      0/0     0/1

# tail -1 ./input/input-dup.bed
# 2       2999    5000    breakend_dup_a  DUP

# gr breakend_dup_ Rodrigo_tests_ignore/output.csv
# breakend_dup_a,2,3000,2,5000,T,]2:5000]T,2000,]N,DUP

squareResult=`$cut "./output/command_4_square-bracketed-dup.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$squareResult" != "2_3000_5000_DUP_1 breakend_dup_a 2 3000 5000 DUP T ]2:5000]T 3 " ]
then
        echo "error 1: Error with command_4 (square bad values)"
        exit 1
fi

echo "Command_4 (square) OK"

angleResult=`$cut "./output/command_4_angle-bracketed-dup.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$angleResult" != "2_3000_5000_DUP_1 breakend_dup_a 2 3000 5000 DUP T <DUP> 3 " ]
then
        echo "error 1: Error with command_4 (angle bad values)"
        exit 1
fi

echo "Command_4 (angle) OK"

BEDresult=`$cut "./output/command_4_BED-dup.annotated.tsv" "AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6}'`
if [ "$BEDresult" != "2_3000_5000_DUP_1 2 3000 5000 DUP 3 " ]
then
        echo "error 1: Error with command_4 (BED bad values)"
        exit 1
fi

echo "Command_4 (BED) OK"



# command_5: empty_del
#            => the T that is in 53040041 is changed to T[15:53040042[. The T is removed, but added back later.
######################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-empty_del.vcf" -outputFile "./output/command_5_square-bracketed-empty_del.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-empty_del.vcf" -outputFile "./output/command_5_angle-bracketed-empty_del.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-empty_del.bed" -svtBEDcol 5 -outputFile "./output/command_5_BED-empty_del.annotated.tsv"

# tail -2 input-square-bracketed-empty_del.vcf
# 15      53040041        empty_del_a     T       T[15:53040042[  .       PASS    SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b GT      0/0     0/1
# 15      53040042        empty_del_b     A       ]15:53040041]A  .       PASS    SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a GT      0/0     0/1

# tail -1 input-angle-bracketed-empty_del.vcf
# 15      53040041        empty_del_a     T       <DEL>   .       PASS    END=53040042;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b       GT      0/0     0/1

# tail -1 ./input/input-empty_del.bed
# 15      53040040        53040042        empty_del_a     DEL

# gr empty_del_ Rodrigo_tests_ignore/output.csv
# -> empty because SVLEN < 50
# "No SV to annotate in the SVinputFile - Exit without error."


# cat ./output/command_5_square-bracketed-empty_del.unannotated.tsv
# 5_53040041_53040042_DEL_T_T[15:53040042[: variantLength (1) < SVminSize (50) (line 2)
# 15_53040041_53040042_DEL_N_A[15:53040042[: variantLength (1) < SVminSize (50) (line 3)
if [ `grep -c "variantLength (1) < SVminSize (50)" ./output/command_5_square-bracketed-empty_del.unannotated.tsv` != 2 ]
then
        echo "error 1: Error with command_5 (square bad values)"
        exit 1
fi
echo "Command_5 (square) OK"

# cat ./output/command_5_angle-bracketed-empty_del.unannotated.tsv
# 15_53040041_53040042_DEL_T_<DEL>: variantLength (1) < SVminSize (50) (line 2)
if [ `grep -c "variantLength (1) < SVminSize (50)" ./output/command_5_angle-bracketed-empty_del.unannotated.tsv` != 1 ]
then
        echo "error 1: Error with command_5 (angle bad values)"
        exit 1
fi
echo "Command_5 (angle) OK"

# WARNING: No filtering on the SV min size (min > 50 bp) from a BED input file
BEDresult=`$cut "./output/command_5_BED-empty_del.annotated.tsv" "AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6}'`
if [ "$BEDresult" != "15_53040041_53040042_DEL_1 15 53040041 53040042 DEL full=3 " ]
then
        echo "error 1: Error with command_5 (BED bad values)"
        exit 1
fi

echo "Command_5 (BED) OK"



# command_6: ins_by_gridss
##########################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-ins_by_gridss.vcf" -SVminSize 1 -outputFile "./output/command_6_square-bracketed-ins_by_gridss.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-ins_by_gridss.vcf" -outputFile "./output/command_6_angle-bracketed-ins_by_gridss.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-ins_by_gridss.bed" -svtBEDcol 5 -outputFile "./output/command_6_BED-ins_by_gridss.annotated.tsv"

# tail -2 ./input/input-square-bracketed-ins_by_gridss.vcf
# 13      53040041        ins_by_gridss   T       TATATATATACACAC[13:53040042[    .       PASS    SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS    GT      0/0     0/1
# 13      53040042        ins_by_gridss   A       ]13:53040041]ATATATATACACACA    .       PASS    SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS    GT      0/0     0/1

# tail -1 ./input/input-angle-bracketed-ins_by_gridss.vcf
# 13      53040041        ins_by_gridss   T       <INS>   .       PASS    EXTRA=DEL_INS_FROM_GRIDSS       GT      0/0     0/1

# tail -1 ./input/input-ins_by_gridss.bed
# 13      53040040        53040041        ns_by_gridss    INS     ATATATATACACAC

# gr ins_by_gridss Rodrigo_tests_ignore/output.csv
# ins_by_gridss,13,53040041,13,53040041,T,TATATATATACACAC,14,,INS


squareResult=`$cut "./output/command_6_square-bracketed-ins_by_gridss.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$squareResult" != "13_53040041_53040041_INS_1 ins_by_gridss 13 53040041 53040041 INS T TATATATATACACAC[13:53040042[ NA " ]
then
        echo "error 1: Error with command_6 (square bad values)"
        exit 1
fi

echo "Command_6 (square) OK"

angleResult=`$cut "./output/command_6_angle-bracketed-ins_by_gridss.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$angleResult" != "13_53040041_53040041_INS_1 ins_by_gridss 13 53040041 53040041 INS T <INS> NA " ]
then
        echo "error 1: Error with command_6 (angle bad values)"
        exit 1
fi

echo "Command_6 (angle) OK"

BEDresult=`$cut "./output/command_6_BED-ins_by_gridss.annotated.tsv" "AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6}'`
if [ "$BEDresult" != "13_53040041_53040041_INS_1 13 53040041 53040041 INS NA " ]
then
        echo "error 1: Error with command_6 (BED bad values)"
        exit 1
fi

echo "Command_6 (BED) OK"



# command_7: dup
################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-dup.vcf" -outputFile "./output/command_4_square-bracketed-dup.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-dup.vcf" -outputFile "./output/command_4_angle-bracketed-dup.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-dup.bed" -svtBEDcol 5 -outputFile "./output/command_4_BED-dup.annotated.tsv"

# tail -2 ./input/input-square-bracketed-dup.vcf
# 2       3000    breakend_dup_a  T       ]2:5000]T       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b       GT      0/0     0/1
# 2       5000    breakend_dup_b  T       T[2:3000[       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a       GT      0/0     0/1

# tail -1 ./input/input-angle-bracketed-dup.vcf
# 2       3000    breakend_dup_a  T       <DUP>   .       PASS    END=5000EXTRA=DUP_PAIRED;MATEID=breakend_dup_b  GT      0/0     0/1

# tail -1 ./input/input-dup.bed
# 2       2999    5000    breakend_dup_a  DUP

# gr breakend_dup_ Rodrigo_tests_ignore/output.csv
# breakend_dup_a,2,3000,2,5000,T,]2:5000]T,2000,]N,DUP

squareResult=`$cut "./output/command_4_square-bracketed-dup.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$squareResult" != "2_3000_5000_DUP_1 breakend_dup_a 2 3000 5000 DUP T ]2:5000]T 3 " ]
then
        echo "error 1: Error with command_7 (square bad values)"
        exit 1
fi

echo "Command_7 (square) OK"

angleResult=`$cut "./output/command_4_angle-bracketed-dup.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$angleResult" != "2_3000_5000_DUP_1 breakend_dup_a 2 3000 5000 DUP T <DUP> 3 " ]
then
        echo "error 1: Error with command_7 (angle bad values)"
        exit 1
fi

echo "Command_7 (angle) OK"

BEDresult=`$cut "./output/command_4_BED-dup.annotated.tsv" "AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6}'`
if [ "$BEDresult" != "2_3000_5000_DUP_1 2 3000 5000 DUP 3 " ]
then
        echo "error 1: Error with command_7 (BED bad values)"
        exit 1
fi

echo "Command_7 (BED) OK"



# command_8: inv1 -- T]3:5000]
##############################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-inv1.vcf" -outputFile "./output/command_8_square-bracketed-inv1.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-inv1.vcf" -outputFile "./output/command_8_angle-bracketed-inv1.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-inv1.bed" -svtBEDcol 5 -outputFile "./output/command_8_BED-inv1.annotated.tsv"

# tail -2 ./input/input-square-bracketed-inv1.vcf
# 3       2999    breakend_inv_1_a        T       T]3:5000]       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b     GT      0/0     0/1
# 3       5000    breakend_inv_1_b        T       [3:2999[T       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a     GT      0/0     0/1

# tail -1 ./input/input-angle-bracketed-inv1.vcf
# 3       2999    breakend_inv_1_a        T       <INV>   .       PASS    END=5000;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b       GT      0/0     0/1

# tail -1 ./input/input-inv1.bed
# 3       2998    5000    breakend_inv_1_a        INV

# gr breakend_inv_1 Rodrigo_tests_ignore/output.csv
# breakend_inv_1_a,3,2999,3,5000,T,T]3:5000],2001,N],INV

squareResult=`$cut "./output/command_8_square-bracketed-inv1.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$squareResult" != "3_2999_5000_INV_1 breakend_inv_1_a 3 2999 5000 INV T T]3:5000] NA " ]
then
        echo "error 1: Error with command_8 (square bad values)"
        exit 1
fi

echo "Command_8 (square) OK"

angleResult=`$cut "./output/command_8_angle-bracketed-inv1.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$angleResult" != "3_2999_5000_INV_1 breakend_inv_1_a 3 2999 5000 INV T <INV> NA " ]
then
        echo "error 1: Error with command_8 (angle bad values)"
        exit 1
fi

echo "Command_8 (angle) OK"

BEDresult=`$cut "./output/command_8_BED-inv1.annotated.tsv" "AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6}'`
if [ "$BEDresult" != "3_2999_5000_INV_1 3 2999 5000 INV NA " ]
then
        echo "error 1: Error with command_8 (BED bad values)"
        exit 1
fi

echo "Command_8 (BED) OK"



# command_9: inv2 -- [3:5001[T
##############################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-inv2.vcf" -outputFile "./output/command_9_square-bracketed-inv2.annotated.tsv" 
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-inv2.vcf" -outputFile "./output/command_9_angle-bracketed-inv2.annotated.tsv"

# tail -2 ./input/input-square-bracketed-inv2.vcf
# 3       3000    breakend_inv_2_a        T       [3:5001[T       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b     GT      0/0     0/1
# 3       5001    breakend_inv_2_b        T       T]3:3000]       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a     GT      0/0     0/1

# tail -1 ./input/input-angle-bracketed-inv2.vcf
# 3       3000    breakend_inv_2_a        T       <INV>   .       PASS    END=5001;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b       GT      0/0     0/1

# gr breakend_inv_2 Rodrigo_tests_ignore/output.csv
# breakend_inv_2_a,3,3000,3,5001,T,[3:5001[T,2001,[N,INV


squareResult=`$cut "./output/command_9_square-bracketed-inv2.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$squareResult" != "3_3000_5001_INV_1 breakend_inv_2_a 3 3000 5001 INV T [3:5001[T NA " ]
then
        echo "error 1: Error with command_9 (square bad values)"
        exit 1
fi

echo "Command_9 (square) OK"

angleResult=`$cut "./output/command_9_angle-bracketed-inv2.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$angleResult" != "3_3000_5001_INV_1 breakend_inv_2_a 3 3000 5001 INV T <INV> NA " ]
then
        echo "error 1: Error with command_9 (angle bad values)"
        exit 1
fi

echo "Command_9 (angle) OK"



# command_10: inv3 (unordered)
#             (we should have a single INV in the output (not 2))
#################################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-inv3.vcf" -outputFile "./output/command_10_square-bracketed-inv3.annotated.tsv"

# tail -2 ./input/input-square-bracketed-inv3.vcf
# 1       9135238 10_2    G       G]1:7852191]    .       PASS    SVTYPE=BND;MATEID=10_1;SVCLASS=inversion        RC:PS   0:0     10:10
# 1       7852191 10_1    A       A]1:9135238]    .       PASS    SVTYPE=BND;MATEID=10_2;SVCLASS=inversion        RC:PS   0:0     10:10

squareResult=`$cut "./output/command_10_square-bracketed-inv3.annotated.tsv" "AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`
if [ "$squareResult" != "1_7852191_9135238_INV_1 10_1 1 7852191 9135238 INV A A]1:9135238] NA " ]
then
        echo "error 1: Error with command_10 (square bad values)"
        exit 1
fi

echo "Command_10 (square) OK"



# command_11: tra1
#################################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-tra1.vcf" -outputFile "./output/command_11_square-bracketed-tra1.annotated.tsv" 
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-tra1.vcf" -outputFile "./output/command_11_angle-bracketed-tra1.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-tra1.bed" -svtBEDcol 5 -outputFile "./output/command_11_BED-tra1.annotated.tsv"

# tail -2 ./input/input-square-bracketed-tra1.vcf
# 2       321682  tra_a   T       ]13:123456]T    .       PASS    SVTYPE=BND      GT      0/0     0/1
# 13      123456  tra_b   C       C[2:321682[     .       PASS    SVTYPE=BND      GT      0/0     0/1

# tail -2 ./input/input-angle-bracketed-tra1.vcf
# 2       321682  tra_a   T       <TRA>   .       PASS    SVTYPE=BND;CHR2=13;END=123456   GT      0/0     0/1
# 13      123456  tra_b   C       <TRA>   .       PASS    SVTYPE=BND;CHR2=2;END=321682    GT      0/0     0/1

# tail -2 ./input/input-tra1.bed
# 2       321681  321682  tra_a   TRA
# 13      123455  123456  tra_b   TRA

# gr "tra_" Rodrigo_tests_ignore/output.csv
# tra_a,2,321682,13,123456,T,]13:123456]T,0,]]N,TRA
# tra_b,2,321682,13,123456,N,]13:123456]N,0,]]N,TRA



squareResult=`$cut "./output/command_11_square-bracketed-tra1.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;ACMG_class" | grep -v "full=" | tail -2 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6}'`
if [ "$squareResult" != "13_123456_123456_TRA_1 tra_b TRA C C[2:321682[ NA 2_321682_321682_TRA_1 tra_a TRA T ]13:123456]T NA " ]
then
        echo "error 1: Error with command_11 (square bad values)"
        exit 1
fi
echo "Command_11 (square) OK"

angleResult=`$cut "./output/command_11_angle-bracketed-tra1.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;ACMG_class" | grep -v "full=" | tail -2 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6}'`
if [ "$angleResult" != "13_123456_123456_TRA_1 tra_b TRA C <TRA>_2_123456 NA 2_321682_321682_TRA_1 tra_a TRA T <TRA>_13_321682 NA " ]
then
        echo "error 1: Error with command_11 (angle bad values)"
        exit 1
fi
echo "Command_11 (angle) OK"

BEDresult=`$cut "./output/command_11_BED-tra1.annotated.tsv" "AnnotSV_ID;SV_type;ACMG_class" | grep -v "full=" | tail -2 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3}'`
if [ "$BEDresult" != "13_123456_123456_TRA_1 TRA NA 2_321682_321682_TRA_1 TRA NA " ]
then
        echo "error 1: Error with command_11 (BED bad values)"
        exit 1
fi
echo "Command_11 (BED) OK"



# command_12: tra2 (no_mateid)
##############################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-tra2.vcf" -outputFile "./output/command_12_square-bracketed-tra2.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-tra2.vcf" -outputFile "./output/command_12_angle-bracketed-tra2.annotated.tsv"

# tail -2 ./input/input-square-bracketed-tra2.vcf
# 17      198982  trn_no_mateid_a A       A]2:321681]     .       PASS    SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID     GT      0/0     0/1
# 2       321681  trn_no_mateid_b G       G]17:198982]    .       PASS    SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID     GT      0/0     0/1

# tail -2 ./input/input-angle-bracketed-tra2.vcf
# 17      198982  trn_no_mateid_a A       <TRA>   .       PASS    SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID     GT      0/0     0/1
# 2       321681  trn_no_mateid_b G       <TRA>   .       PASS    SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID     GT      0/0     0/1

# gr trn_no_mateid Rodrigo_tests_ignore/output.csv
# trn_no_mateid_b,2,321681,17,198982,G,G]17:198982],0,N]],TRN

squareResult=`$cut "./output/command_12_square-bracketed-tra2.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;ACMG_class" | grep -v "full=" | tail -2 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6}'`
if [ "$squareResult" != "17_198982_198982_TRA_1 trn_no_mateid_a TRA A A]2:321681] NA 2_321681_321681_TRA_1 trn_no_mateid_b TRA G G]17:198982] NA " ]
then
        echo "error 1: Error with command_12 (square bad values)"
        exit 1
fi
echo "Command_12 (square) OK"

angleResult=`$cut "./output/command_12_angle-bracketed-tra2.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;ACMG_class" | grep -v "full=" | tail -2 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6}'`
if [ "$angleResult" != "17_198982_198982_TRA_1 trn_no_mateid_a TRA A <TRA> NA 2_321681_321681_TRA_1 trn_no_mateid_b TRA G <TRA> NA " ]
then
        echo "error 1: Error with command_12 (angle bad values)"
        exit 1
fi
echo "Command_12 (angle) OK"



############################################################################
##
## Square-bracketed notation with only 1 BND, and only the reciprocal BND
##
############################################################################

# The "BNDrescue" flag is added in the INFO field (for the rescue BND) 


# command_13: OnlyTheReciprocalBND_square-bracketed-del_1
#########################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input_OnlyTheReciprocalBND_square-bracketed-del_1.vcf" -outputFile "./output/command_13_square-bracketed-del_1.annotated.tsv" -includeci 0

# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-del_1.vcf
# 12      5000    breakend_del_1_b        T       ]12:3000]T      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a;CIPOS=-1,1;CIEND=-5,5       GT      0/0     0/1

squareResult=`$cut "./output/command_13_square-bracketed-del_1.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7}'`
if [ "$squareResult" != "12_3000_5000_DEL_1 breakend_del_1_b DEL T ]12:3000]T SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a;CIPOS=-5,5;CIEND=-1,1;BNDrescue 3 " ]
then
        echo "error 1: Error with command_13 (OnlyTheReciprocalBND_square bad values)"
        exit 1
fi
echo "Command_13 (OnlyTheReciprocalBND_square) OK"

if [ `echo $squareResult | grep -c BNDrescue` != 1 ]
then
        echo "error 1: Error with command_13 (OnlyTheReciprocalBND_square: no \"BNDrescue\" flag)"
        exit 1
fi

echo "Command_13 (OnlyTheReciprocalBND_square: \"BNDrescue\" flag present) OK"



# command_14: OnlyTheReciprocalBND_square-bracketed-del_partial_pass
####################################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input_OnlyTheReciprocalBND_square-bracketed-del_partial_pass.vcf" -outputFile "./output/command_14_square-bracketed-del_partial_pass.annotated.tsv"

# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-del_partial_pass.vcf
# 15      5000    breakend_del_partial_pass_a     T       ]15:3000]T      .       FAIL    SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b     GT      0/0     0/1

squareResult=`$cut "./output/command_14_square-bracketed-del_partial_pass.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7}'`
if [ "$squareResult" != "15_3000_5000_DEL_1 breakend_del_partial_pass_a DEL T ]15:3000]T SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b;BNDrescue 3 " ]
then
        echo "error 1: Error with command_14 (OnlyTheReciprocalBND_square bad values)"
        exit 1
fi
echo "Command_14 (OnlyTheReciprocalBND_square) OK"



# command_15: OnlyTheReciprocalBND_square-bracketed-del_unordered
#################################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input_OnlyTheReciprocalBND_square-bracketed-del_unordered.vcf" -outputFile "./output/command_15_square-bracketed-del_unordered.annotated.tsv"

# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-del_unordered.vcf
# 22      5000    breakend_del_unordered_b        T       ]22:3000]T      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a     GT      0/0     0/1

squareResult=`$cut "./output/command_15_square-bracketed-del_unordered.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7}'`
if [ "$squareResult" != "22_3000_5000_DEL_1 breakend_del_unordered_b DEL T ]22:3000]T SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a;BNDrescue 3 " ]
then
        echo "error 1: Error with command_15 (OnlyTheReciprocalBND_square bad values)"
        exit 1
fi
echo "Command_15 (OnlyTheReciprocalBND_square) OK"



# command_16: OnlyTheReciprocalBND_square-bracketed-dup 
#######################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input_OnlyTheReciprocalBND_square-bracketed-dup.vcf" -outputFile "./output/command_16_square-bracketed-dup.annotated.tsv"

# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-dup.vcf
# 2       5000    breakend_dup_b  T       T[2:3000[       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a       GT      0/0     0/1

squareResult=`$cut "./output/command_16_square-bracketed-dup.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7}'`
if [ "$squareResult" != "2_3000_5000_DUP_1 breakend_dup_b DUP T T[2:3000[ SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a;BNDrescue 3 " ]
then
        echo "error 1: Error with command_16 (OnlyTheReciprocalBND_square bad values)"
        exit 1
fi
echo "Command_16 (OnlyTheReciprocalBND_square) OK"



# command_17: OnlyTheReciprocalBND_square-bracketed-empty_del
#############################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input_OnlyTheReciprocalBND_square-bracketed-empty_del.vcf" -outputFile "./output/command_17_square-bracketed-empty_del.annotated.tsv"

# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-empty_del.vcf
# 15      53040042        empty_del_b     A       ]15:53040041]A  .       PASS    SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a GT      0/0     0/1

if [ `grep -c "variantLength (1) < SVminSize (50)" ./output/command_17_square-bracketed-empty_del.unannotated.tsv` != 1 ]
then
        echo "error 1: Error with command_17 (OnlyTheReciprocalBND_square bad values)"
        exit 1
fi
echo "Command_17 (OnlyTheReciprocalBND_square) OK"



# command_18: OnlyTheReciprocalBND_square-bracketed-ins_by_gridss 
#################################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input_OnlyTheReciprocalBND_square-bracketed-ins_by_gridss.vcf" -SVminSize 1 -outputFile "./output/command_18_square-bracketed-ins_by_gridss.annotated.tsv"

# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-ins_by_gridss.vcf
# 13      53040042        ins_by_gridss   A       ]13:53040041]ATATATATACACACA    .       PASS    SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS    GT      0/0     0/1

squareResult=`$cut "./output/command_18_square-bracketed-ins_by_gridss.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7}'`
if [ "$squareResult" != "13_53040041_53040041_INS_1 ins_by_gridss INS A ]13:53040041]ATATATATACACACA SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS;BNDrescue NA " ]
then
        echo "error 1: Error with command_18 (OnlyTheReciprocalBND_square bad values)"
        exit 1
fi
echo "Command_18 (OnlyTheReciprocalBND_square) OK"



# command_19: OnlyTheReciprocalBND_square-bracketed-inv1
########################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input_OnlyTheReciprocalBND_square-bracketed-inv1.vcf" -outputFile "./output/command_19_square-bracketed-inv1.annotated.tsv"

# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-inv1.vcf
# 3       5000    breakend_inv_1_b        T       [3:2999[T       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a     GT    0/0      0/1

squareResult=`$cut "./output/command_19_square-bracketed-inv1.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7}'`
if [ "$squareResult" != "3_2999_5000_INV_1 breakend_inv_1_b INV T [3:2999[T SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a;BNDrescue NA " ]
then
        echo "error 1: Error with command_19 (OnlyTheReciprocalBND_square bad values)"
        exit 1
fi
echo "Command_19 (OnlyTheReciprocalBND_square) OK"



# command_20: OnlyTheReciprocalBND_square-bracketed-inv2
########################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input_OnlyTheReciprocalBND_square-bracketed-inv2.vcf" -outputFile "./output/command_20_square-bracketed-inv2.annotated.tsv"

# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-inv2.vcf
# 3       5001    breakend_inv_2_b        T       T]3:3000]       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a     GT    0/0      0/1

squareResult=`$cut "./output/command_20_square-bracketed-inv2.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7}'`
if [ "$squareResult" != "3_3000_5001_INV_1 breakend_inv_2_b INV T T]3:3000] SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a;BNDrescue NA " ]
then
        echo "error 1: Error with command_20 (OnlyTheReciprocalBND_square bad values)"
        exit 1
fi
echo "Command_20 (OnlyTheReciprocalBND_square) OK"



# command_21: OnlyTheReciprocalBND_square-bracketed-tra1_1
##########################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input_OnlyTheReciprocalBND_square-bracketed-tra1_1.vcf" -outputFile "./output/command_21_OnlyTheReciprocalBND_square-bracketed-tra1_1.annotated.tsv"

# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-tra1_1.vcf
# 2       321682  tra_a   T       ]13:123456]T    .       PASS    SVTYPE=BND      GT      0/0     0/1

squareResult=`$cut "./output/command_21_OnlyTheReciprocalBND_square-bracketed-tra1_1.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class" | grep -v "full=" | tail -2 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7}'`
if [ "$squareResult" != "13_123456_123456_TRA_1 tra_a TRA T ]13:123456]T SVTYPE=BND;BNDrescue NA 2_321682_321682_TRA_1 tra_a TRA T ]13:123456]T SVTYPE=BND NA " ]
then
        echo "error 1: Error with command_21 (OnlyTheReciprocalBND_square bad values)"
        exit 1
fi
echo "Command_21 (OnlyTheReciprocalBND_square) OK"



# command_21: OnlyTheReciprocalBND_square-bracketed-tra1_2
##########################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.vcf" -outputFile "./output/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.annotated.tsv"

# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.vcf
# 13      123456  tra_b   C       C[2:321682[     .       PASS    SVTYPE=BND      GT      0/0     0/1

squareResult=`$cut "./output/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.annotated.tsv" "AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class" | grep -v "full=" | tail -2 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2, $3, $4, $5, $6, $7}'`
if [ "$squareResult" != "13_123456_123456_TRA_1 tra_b TRA C C[2:321682[ SVTYPE=BND NA 2_321682_321682_TRA_1 tra_b TRA C C[2:321682[ SVTYPE=BND;BNDrescue NA " ]
then
        echo "error 1: Error with command_21 (OnlyTheReciprocalBND_square bad values)"
        exit 1
fi
echo "Command_21 (OnlyTheReciprocalBND_square) OK"




################################################################
################################################################
################################################################

echo "ok - Finished"




================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-del_1.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
12	3000	breakend_del_1_a	T	<DEL>	.	PASS	END=5000;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-del_partial_pass.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
15	3000	breakend_del_partial_pass_b	T	<DEL>	.	PASS	EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a;END=5000	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-dup.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	3000	breakend_dup_a	T	<DUP>	.	PASS	END=5000EXTRA=DUP_PAIRED;MATEID=breakend_dup_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-empty_del.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
15	53040041	empty_del_a	T	<DEL>	.	PASS	END=53040042;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-ins_by_gridss.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
13	53040041	ins_by_gridss	T	<INS>	.	PASS	EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-inv1.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
3	2999	breakend_inv_1_a	T	<INV>	.	PASS	END=5000;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-inv2.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
3	3000	breakend_inv_2_a	T	<INV>	.	PASS	END=5001;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-tra1.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	321682	tra_a	T	<TRA>	.	PASS	SVTYPE=BND;CHR2=13;END=123456	GT	0/0	0/1
13	123456	tra_b	C	<TRA>	.	PASS	SVTYPE=BND;CHR2=2;END=321682	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-tra2.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
17	198982	trn_no_mateid_a	A	<TRA>	.	PASS	SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID	GT	0/0	0/1
2	321681	trn_no_mateid_b	G	<TRA>	.	PASS	SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-del_1.bed
================================================
12	2999	5000	breakend_del_1_a	DEL


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-del_partial_pass.bed
================================================
15	2999	5000	breakend_del_partial_pass_b	DEL


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-dup.bed
================================================
2	2999	5000	breakend_dup_a	DUP


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-empty_del.bed
================================================
15	53040040	53040042	empty_del_a	DEL


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-ins_by_gridss.bed
================================================
13	53040040	53040041	ns_by_gridss	INS	ATATATATACACAC 


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-inv1.bed
================================================
3	2998	5000	breakend_inv_1_a	INV


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-del_1.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
12	3000	breakend_del_1_a	T	T[12:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b	GT	0/0	0/1
12	5000	breakend_del_1_b	T	]12:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-del_partial_pass.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
15	5000	breakend_del_partial_pass_a	T	]15:3000]T	.	FAIL	SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b	GT	0/0	0/1
15	3000	breakend_del_partial_pass_b	T	T[15:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-del_unordered.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
22	5000	breakend_del_unordered_b	T	]22:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a	GT	0/0	0/1
22	3000	breakend_del_unordered_a	T	T[22:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-dup.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	3000	breakend_dup_a	T	]2:5000]T	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b	GT	0/0	0/1
2	5000	breakend_dup_b	T	T[2:3000[	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-empty_del.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
15	53040041	empty_del_a	T	T[15:53040042[	.	PASS	SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b	GT	0/0	0/1
15	53040042	empty_del_b	A	]15:53040041]A	.	PASS	SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-ins_by_gridss.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
13	53040041	ins_by_gridss	T	TATATATATACACAC[13:53040042[	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1
13	53040042	ins_by_gridss	A	]13:53040041]ATATATATACACACA	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-inv1.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
3	2999	breakend_inv_1_a	T	T]3:5000]	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b	GT	0/0	0/1
3	5000	breakend_inv_1_b	T	[3:2999[T	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-inv2.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
3	5001	breakend_inv_2_b	T	T]3:3000]	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a	GT	0/0	0/1
3	3000	breakend_inv_2_a	T	[3:5001[T	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-inv3.vcf
================================================
##fileformat=VCFv4.1
##contig=<ID=1,length=249250621>
##contig=<ID=2,length=243199373>
##contig=<ID=3,length=198022430>
##contig=<ID=4,length=191154276>
##contig=<ID=5,length=180915260>
##contig=<ID=6,length=171115067>
##contig=<ID=7,length=159138663>
##contig=<ID=8,length=146364022>
##contig=<ID=9,length=141213431>
##contig=<ID=10,length=135534747>
##contig=<ID=11,length=135006516>
##contig=<ID=12,length=133851895>
##contig=<ID=13,length=115169878>
##contig=<ID=14,length=107349540>
##contig=<ID=15,length=102531392>
##contig=<ID=16,length=90354753>
##contig=<ID=17,length=81195210>
##contig=<ID=18,length=78077248>
##contig=<ID=19,length=59128983>
##contig=<ID=20,length=63025520>
##contig=<ID=21,length=48129895>
##contig=<ID=22,length=51304566>
##contig=<ID=X,length=155270560>
##contig=<ID=Y,length=59373566>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Length of the SV">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of the SV">
##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=GENE,Number=.,Type=String,Description="Gene(s) overlap in breakpoint">
##INFO=<ID=CLUSTER,Number=.,Type=String,Description="IDs of other clustered breakpoints">
##INFO=<ID=EXTRA,Number=.,Type=String,Description="Extra info for testing">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
1	9135238	10_2	G	G]1:7852191]	.	PASS	SVTYPE=BND;MATEID=10_1;SVCLASS=inversion	RC:PS	0:0	10:10
1	7852191	10_1	A	A]1:9135238]	.	PASS	SVTYPE=BND;MATEID=10_2;SVCLASS=inversion	RC:PS	0:0	10:10


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-tra1.vcf
================================================
##fileformat=VCFv4.1
##contig=<ID=1,length=249250621>
##contig=<ID=2,length=243199373>
##contig=<ID=3,length=198022430>
##contig=<ID=4,length=191154276>
##contig=<ID=5,length=180915260>
##contig=<ID=6,length=171115067>
##contig=<ID=7,length=159138663>
##contig=<ID=8,length=146364022>
##contig=<ID=9,length=141213431>
##contig=<ID=10,length=135534747>
##contig=<ID=11,length=135006516>
##contig=<ID=12,length=133851895>
##contig=<ID=13,length=115169878>
##contig=<ID=14,length=107349540>
##contig=<ID=15,length=102531392>
##contig=<ID=16,length=90354753>
##contig=<ID=17,length=81195210>
##contig=<ID=18,length=78077248>
##contig=<ID=19,length=59128983>
##contig=<ID=20,length=63025520>
##contig=<ID=21,length=48129895>
##contig=<ID=22,length=51304566>
##contig=<ID=X,length=155270560>
##contig=<ID=Y,length=59373566>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Length of the SV">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of the SV">
##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=GENE,Number=.,Type=String,Description="Gene(s) overlap in breakpoint">
##INFO=<ID=CLUSTER,Number=.,Type=String,Description="IDs of other clustered breakpoints">
##INFO=<ID=EXTRA,Number=.,Type=String,Description="Extra info for testing">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	321682	tra_a	T	]13:123456]T	.	PASS	SVTYPE=BND	GT	0/0	0/1
13	123456	tra_b	C	C[2:321682[	.	PASS	SVTYPE=BND	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-tra2.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
17	198982	trn_no_mateid_a	A	A]2:321681]	.	PASS	SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID	GT	0/0	0/1
2	321681	trn_no_mateid_b	G	G]17:198982]	.	PASS	SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-tra1.bed
================================================
2	321681	321682	tra_a	TRA
13	123455	123456	tra_b	TRA


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-del_1.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
12	5000	breakend_del_1_b	T	]12:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a;CIPOS=-1,1;CIEND=-5,5	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-del_partial_pass.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
15	5000	breakend_del_partial_pass_a	T	]15:3000]T	.	FAIL	SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-del_unordered.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
22	5000	breakend_del_unordered_b	T	]22:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-dup.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	5000	breakend_dup_b	T	T[2:3000[	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-empty_del.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
15	53040042	empty_del_b	A	]15:53040041]A	.	PASS	SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-ins_by_gridss.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
13	53040042	ins_by_gridss	A	]13:53040041]ATATATATACACACA	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-inv1.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
3	5000	breakend_inv_1_b	T	[3:2999[T	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-inv2.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
3	5001	breakend_inv_2_b	T	T]3:3000]	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-tra1_1.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	321682	tra_a	T	]13:123456]T	.	PASS	SVTYPE=BND	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
13	123456	tra_b	C	C[2:321682[	.	PASS	SVTYPE=BND	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_35_phenogenius/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"



# With HPO where Exomiser and Phenogenius quite disagree
########################################################
mkdir -p ./output
rm -f "./output/test.GRCh37_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile ./input/test.bed  -outputFile "./output/test.GRCh38_tcl.annotated.tsv" -svtbedcol 5 -genomeBuild GRCh38 -hpo "HP:0001156,HP:0001363,HP:0011304,HP:0010055"

# $cut "./output/test.GRCh38_tcl.annotated.tsv" "Annotation_mode;PhenoGenius_score;PhenoGenius_phenotype;PhenoGenius_specificity;Exomiser_gene_pheno_score;Human_pheno_evidence"
# Annotation_mode PhenoGenius_score       PhenoGenius_phenotype   PhenoGenius_specificity Exomiser_gene_pheno_score       Human_pheno_evidence
# full                    C       0.6955
# split   0.47    Brachydactyly   C       0.6955  1p36 deletion syndrome;Brachydactyly;Broad hallux;Broad thumb;Camptodactyly of finger;Craniosynostosis;Delayed cranial suture closure;Foot polydactyly
# split   -1.0                    0.0000
# ...
annotations=`$cut "./output/test.GRCh38_tcl.annotated.tsv" "Annotation_mode;PhenoGenius_specificity" | grep full`
if [ `echo $annotations | grep -c "C"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: check the PhenoGenius_specificity"
        exit 1
fi


# With other HPO where Exomiser and Phenogenius agree
#####################################################
rm -f "./output/PKD1.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile ./input/PKD1.bed -outputFile "./output/PKD1.annotated.tsv" -svtbedcol 4 -genomeBuild GRCh38 -hpo "HP:0000107,HP:0000108,HP:0001407,HP:0005562"
 
# $cut "./output/PKD1.annotated.tsv" "Annotation_mode;PhenoGenius_score;PhenoGenius_phenotype;PhenoGenius_specificity;Exomiser_gene_pheno_score;Human_pheno_evidence"
# Annotation_mode PhenoGenius_score       PhenoGenius_phenotype   PhenoGenius_specificity Exomiser_gene_pheno_score       Human_pheno_evidence
# full                    A       0.9714
# split   6.82    Hepatic cysts, Renal corticomedullary cysts, Multiple renal cysts, Renal cyst   A       0.9714  Hepatic cysts;Multiple renal cysts;Polycystic kidney disease 1;Polycystic kidney dysplasia;Renal corticomedullary cysts;Renal cyst
# ...
annotations=`$cut "./output/PKD1.annotated.tsv" "Annotation_mode;PhenoGenius_specificity" | grep full`
if [ `echo $annotations | grep -c "A"` == 1 ]
then
        echo "Ok"
else
        echo "error 1: check the PhenoGenius_specificity"
        exit 1
fi



echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_35_phenogenius/input/PKD1.bed
================================================
16	2098710	2105898	DEL	PKD1gene
16	3057619	3058179	DEL	PKD1reg_el


================================================
FILE: tests/AnnotSV/test_35_phenogenius/input/test.bed
================================================
#chrom	start	end	ty	SV type	e	ez	ferf	fde 	l	kj	kdfe	e
1	3204667	4204717	pp	Del	DEL_pindel_129	ACACCATTATCATTATCATCACCACCACCACCACCACCACACCACCACCAT	A	.	PASS	AC=2432;AF=0.485623;AFR_AF=0.4902;AMR_AF=0.4841;AN=5008;CS=DEL_pindel;EAS_AF=0.4841;END=4204717;EUR_AF=0.4841;NS=2504;SAS_AF=0.4836;SITEPOST=0.9999;SVTYPE=DEL	GT	1|0
1	8200707	8211256	pp	DUP	DUP_gs_CNV_1_8200707_8211256	G	<CN2>	.	PASS	AC=44;AF=0.00878594;AFR_AF=0.0015;AMR_AF=0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.001;END=8211256;EUR_AF=0.0308;NS=2504;SAS_AF=0.0041;SITEPOST=0.9888;SVTYPE=DUP	GT	0|1
1	10482499	10483790	pp	DEL	UW_VH_0	G	<CN0>	100	PASS	AC=1649;AF=0.329273;AFR_AF=0.4092;AMR_AF=0.3458;AN=5008;CIEND=0,468;CIPOS=-504,0;CS=DEL_union;EAS_AF=0.2837;END=10483790;EUR_AF=0.3091;MC=SI_BD_118,EM_DL_DEL1005915,YL_CN_ASW_57,YL_CN_STU_30,YL_CN_ESN_29,YL_CN_JPT_45,YL_CN_PEL_36,YL_CN_GIH_28;NS=2504;SAS_AF=0.2771;SVTYPE=DEL	GT	1|0
1	17226064	17452112	pp	DUP	DUP_gs_CNV_1_17026064_17052112	G	<CN2>,<CN3>,<CN4>,<CN5>	.	PASS	AC=1463,2202,294,57;AF=0.292133,0.439696,0.0587061,0.0113818;AFR_AF=0.2829,0.4327,0.0522,0.0318;AMR_AF=0.304,0.4193,0.0389,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.1667,0.631,0.13,0.0079;SVTYPE=GAIN	GT	2|1
1	145120320	145182150	pp	DEL	DEL_pindel_129	ACACCATTATCATTATCATCACCACCACCACCACCACCACACCACCACCAT	A	.	PASS	AC=2432;AF=0.485623;AFR_AF=0.4902;AMR_AF=0.4841;AN=5008;CS=DEL_pindel;EAS_AF=0.4841;END=4204717;EUR_AF=0.4841;NS=2504;SAS_AF=0.4836;SITEPOST=0.9999;SVTYPE=DEL	GT	1|0
11	5106964	5107211	pp	DEL_ALU	DEL_pindel_32701	TAAAGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	.	PASS	AC=3429;AF=0.684704;AFR_AF=0.8041;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.5565;END=5107211;EUR_AF=0.6799;MEINFO=AluYc1,58,281,+;NS=2504;SAS_AF=0.6728;SITEPOST=0.9983;SVTYPE=DEL_ALU	GT	0|1
11	5521609	5523196	pp	DEL	UW_VH_1531	T	<CN0>	100	PASS	AC=429;AF=0.0856629;AFR_AF=0.0098;AMR_AF=0.1599;AN=5008;CIEND=0,403;CIPOS=-447,0;CS=DEL_union;EAS_AF=0.0744;END=5523196;EUR_AF=0.164;MC=EM_DL_DEL10154883,SI_BD_11162,YL_CN_PUR_3090,BI_GS_DEL1_B1_P1829_437,YL_CN_PEL_2285;NS=2504;SAS_AF=0.0665;SVTYPE=DEL	GT	1|0
4	91931556	91935838	pp	DEL	BI_GS_DEL1_B2_P0785_570	G	<CN0>	100	PASS	AC=1284;AF=0.25639;AFR_AF=0.0537;AMR_AF=0.2205;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3919;END=91935838;EUR_AF=0.3936;MC=EM_DL_DEL72105,YL_CN_YRI_1298,UW_VH_389;NS=2504;SAS_AF=0.2751;SVTYPE=DEL	GT	0|1
4	94439081	94439177	pp	DEL	DEL_pindel_12582	TATGTATGTATATACATACATGTATATGTATGTATATACATACATGTACATGTATGTATATACATACATGTATATGTATGTATATACATACATGTAC	T	.	PASS	AC=1176;AF=0.234824;AFR_AF=0.1573;AMR_AF=0.2248;AN=5008;CS=DEL_pindel;EAS_AF=0.2123;END=94439177;EUR_AF=0.3598;NS=2504;SAS_AF=0.2413;SITEPOST=0.9929;SVTYPE=DEL	GT	0|1
7	49057624	49057625	pp	ALU	ALU_umary_ALU_6021	T	<INS:ME:ALU>	.	.	AC=2228;AF=0.444888;AFR_AF=0.5983;AMR_AF=0.4193;AN=5008;CS=ALU_umary;EAS_AF=0.2817;EUR_AF=0.4533;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.4151;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GCCTGTAGCTTGGTTCT	GT	1|0
7	49725896	49725897	pp	LINE1	L1_umary_LINE1_1503	C	<INS:ME:LINE1>	.	.	AC=2805;AF=0.560104;AFR_AF=0.6225;AMR_AF=0.4755;AN=5008;CS=L1_umary;EAS_AF=0.5456;EUR_AF=0.5378;MEINFO=LINE1,5545,5845,-;NS=2504;SAS_AF=0.5736;SITEPOST=0.9996;SVLEN=300;SVTYPE=LINE1;TSD=null	GT	0|1
7	50104763	50106067	pp	DEL	BI_GS_DEL1_B2_P1289_68	C	<CN0>	100	PASS	AC=189;AF=0.0377396;AFR_AF=0.0832;AMR_AF=0.0231;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=50106067;EUR_AF=0.0547;MC=SI_BD_7759,UW_VH_2223;NS=2504;SAS_AF=0.0082;SVTYPE=DEL	GT	0|1


================================================
FILE: tests/AnnotSV/test_36_chm13/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}


mkdir -p ./output


# Check that no column is shifted
#################################

# RefSeq
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -svtBEDcol 4 -genomeBuild CHM13 -outputFile "./output/test_tcl.annotated.tsv" -Tx RefSeq

for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "error1: (test39)"
                exit 1
        fi
done


# ENSEMBL
rm -f "./output/test_tcl.annotated.tsv"
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test.bed" -svtBEDcol 4 -genomeBuild CHM13 -outputFile "./output/test_tcl.annotated.tsv" -Tx ENSEMBL

for v in `$cut "./output/test_tcl.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "error2: (test39)"
                exit 1
        fi
done


echo "ok - Finished"




================================================
FILE: tests/AnnotSV/test_36_chm13/input/test.bed
================================================
1	108190708	108194629	DEL


================================================
FILE: tests/AnnotSV/test_37_SVLEN/README
================================================
cd $ANNOTSV/tests/data/test_37_SVLEN


# SV can be described:
# - in different file format (VCF, BED)
# - with different notations 
#
# Categories:
#############

- VCF: <INS> (symbolic SV allele <=> angle-bracketed notation)

- VCF: <DEL>, <INV>, <DUP>, <CN0>... (symbolic SV allele, other than INS <=> angle-bracketed notation)
	input-angle-bracketed-del.vcf
	input-angle-bracketed-dup.vcf
	input-angle-bracketed-inv.vcf
	input-angle-bracketed-tra.vcf

- VCF: square-bracketed notation
	input-square-bracketed-del.vcf
	input-square-bracketed-dup.vcf
	input-square-bracketed-ins_by_gridss.vcf
	input-square-bracketed-inv.vcf
	input-square-bracketed-tra.vcf

- VCF: REF=A ALT=ATTCGTT

- BED: CHROM POS END ... (0-based notation)
	input-del.bed
	input-dup.bed
	input-ins_by_gridss.bed
	input-inv.bed
	input-tra.bed


================================================
FILE: tests/AnnotSV/test_37_SVLEN/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail

###################################################################
####                                                           ####
####                Check the SV_length in the output          ####
####                                                           ####
###################################################################

mkdir -p ./output
rm -f ./output/category_*.annotated.tsv
rm -f ./output/category_*.unannotated.tsv


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


##############################################################
# Category 1 -
# VCF: <INS> (symbolic SV allele <=> angle-bracketed notation)
##############################################################

# ...Ajouter un exemple



##############################################################
# Category 2 -
# VCF: <DEL>, <INV>, <DUP>, <CN0>... (symbolic SV allele, other than INS <=> angle-bracketed notation)
######################################################################################################


# input-angle-bracketed-del.vcf 
###############################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-del.vcf" -outputFile "./output/category_2_angle-bracketed-del.annotated.tsv"

# tail -1 ./input/input-angle-bracketed-del.vcf
# 12      3000    breakend_del_1_a        T       <DEL>   .       PASS    END=5000;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b       GT      0/0     0/1

angleResult=`$cut "./output/category_2_angle-bracketed-del.annotated.tsv" "SV_length" | tail -1  | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$angleResult" != "-2000 " ]
then
        echo "Error with category_2 (angle del)"
        exit 1
fi

echo "Category_2 (angle del) OK"


# input-angle-bracketed-dup.vcf
###############################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-dup.vcf" -outputFile "./output/category_2_angle-bracketed-dup.annotated.tsv"

# tail -1 ./input/input-angle-bracketed-dup.vcf
# 2       3000    breakend_dup_a  T       <DUP>   .       PASS    END=5000EXTRA=DUP_PAIRED;MATEID=breakend_dup_b  GT      0/0     0/1

angleResult=`$cut "./output/category_2_angle-bracketed-dup.annotated.tsv" "SV_length" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$angleResult" != "2000 " ]
then
        echo "Error with category_2 (angle dup)"
        exit 1
fi

echo "Category_2 (angle dup) OK"


# input-angle-bracketed-inv.vcf
###############################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-inv.vcf" -outputFile "./output/category_2_angle-bracketed-inv.annotated.tsv"

# tail -1 ./input/input-angle-bracketed-inv.vcf
# 3       2999    breakend_inv_1_a        T       <INV>   .       PASS    END=5000;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b       GT      0/0     0/1

angleResult=`$cut "./output/category_2_angle-bracketed-inv.annotated.tsv" "SV_length" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$angleResult" != "2001 " ]
then
        echo "Error with category_2 (angle inv)"
        exit 1
fi

echo "Category_2 (angle inv) OK"


# input-angle-bracketed-tra.vcf
###############################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-angle-bracketed-inv.vcf" -outputFile "./output/category_2_angle-bracketed-inv.annotated.tsv"

# tail -1 ./input/input-angle-bracketed-inv.vcf
# 3       2999    breakend_inv_1_a        T       <INV>   .       PASS    END=5000;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b       GT      0/0     0/1

angleResult=`$cut "./output/category_2_angle-bracketed-inv.annotated.tsv" "SV_length" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$angleResult" != "2001 " ]
then
        echo "Error with category_2 (angle tra)"
        exit 1
fi

echo "Category_2 (angle tra) OK"




################################
# Category 3 -
# VCF: square-bracketed notation
################################


# input-square-bracketed-del.vcf
################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-del.vcf" -outputFile "./output/category_3_square-bracketed-del.annotated.tsv"

# tail -2 ./input/input-square-bracketed-del.vcf
# 12      3000    breakend_del_1_a        T       T[12:5000[      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b     GT      0/0     0/1
# 12      5000    breakend_del_1_b        T       ]12:3000]T      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a     GT      0/0     0/1

squareResult=`$cut "./output/category_3_square-bracketed-del.annotated.tsv" "SV_length" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$squareResult" != "-2000 " ]
then
        echo "Error with category_3 (square del)"
        exit 1
fi

echo "Category_3 (square del) OK"


# input-square-bracketed-dup.vcf
################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-dup.vcf" -outputFile "./output/category_3_square-bracketed-dup.annotated.tsv"

# tail -2 ./input/input-square-bracketed-dup.vcf
# 2       3000    breakend_dup_a  T       ]2:5000]T       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b       GT      0/0     0/1
# 2       5000    breakend_dup_b  T       T[2:3000[       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a       GT      0/0     0/1

squareResult=`$cut "./output/category_3_square-bracketed-dup.annotated.tsv" "SV_length" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$squareResult" != "2000 " ]
then
        echo "Error with category_3 (square dup)"
        exit 1
fi

echo "Category_3 (square dup) OK"


# input-square-bracketed-ins_by_gridss.vcf
##########################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-ins_by_gridss.vcf" -SVminSize 1 -outputFile "./output/category_3_square-bracketed-ins_by_gridss.annotated.tsv"

# tail -2 ./input/input-square-bracketed-ins_by_gridss.vcf
# 13      53040041        ins_by_gridss   T       TATATATATACACAC[13:53040042[    .       PASS    SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS    GT      0/0     0/1
# 13      53040042        ins_by_gridss   A       ]13:53040041]ATATATATACACACA    .       PASS    SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS    GT      0/0     0/1

squareResult=`$cut "./output/category_3_square-bracketed-ins_by_gridss.annotated.tsv" "SV_length" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }
'`
if [ "$squareResult" != "14 " ]
then
        echo "Error with category_3 (square ins)"
        exit 1
fi

echo "Category_3 (square ins) OK"


# input-square-bracketed-inv.vcf
################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-inv.vcf" -outputFile "./output/category_3_square-bracketed-inv.annotated.tsv"

# tail -2 ./input/input-square-bracketed-inv.vcf
# 3       2999    breakend_inv_1_a        T       T]3:5000]       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b     GT      0/0     0/1
# 3       5000    breakend_inv_1_b        T       [3:2999[T       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a     GT      0/0     0/1
squareResult=`$cut "./output/category_3_square-bracketed-inv.annotated.tsv" "SV_length" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$squareResult" != "2001 " ]
then
        echo "Error with category_3 (square inv)"
        exit 1
fi

echo "Category_3 (square inv) OK"


# input-square-bracketed-tra.vcf
################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-square-bracketed-tra.vcf" -outputFile "./output/category_3_square-bracketed-tra.annotated.tsv"

# tail -2 ./input/input-square-bracketed-tra.vcf
# 2       321682  tra_a   T       ]13:123456]T    .       PASS    SVTYPE=BND      GT      0/0     0/1
# 13      123456  tra_b   C       C[2:321682[     .       PASS    SVTYPE=BND      GT      0/0     0/1

squareResult=`$cut "./output/category_3_square-bracketed-tra.annotated.tsv" "SV_length" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$squareResult" != "0 " ]
then
        echo "Error with category_3 (square tra)"
        exit 1
fi
echo "Category_3 (square tra) OK"


########################
# Category 4 -
# VCF: REF=A ALT=ATTCGTT
########################

# ...Ajouter un exemple




###########################################
# Category 5 -
# BED: CHROM POS END ... (0-based notation)
###########################################


# input-del.bed
###############

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-del.bed" -svtBEDcol 5 -outputFile "./output/category_5_BED-del.annotated.tsv"

# tail -1 ./input/input-del.bed
# 12      2999    5000    breakend_del_1_a        DEL

BEDresult=`$cut "./output/category_5_BED-del.annotated.tsv" "SV_length" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1}'`
if [ "$BEDresult" != "-2001 " ]
then
        echo "Error with category_5 (BED del)"
        exit 1
fi

echo "Category_5 (BED del) OK"


# input-dup.bed
###############

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-dup.bed" -svtBEDcol 5 -outputFile "./output/category_5_BED-dup.annotated.tsv"

# tail -1 ./input/input-dup.bed
# 2       2999    5000    breakend_dup_a  DUP

BEDresult=`$cut "./output/category_5_BED-dup.annotated.tsv" "SV_length" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$BEDresult" != "2001 " ]
then
        echo "Error with category_5 (BED dup)"
        exit 1
fi

echo "Category_5 (BED dup) OK"


# input-ins_by_gridss.bed
#########################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-ins_by_gridss.bed" -svtBEDcol 5 -outputFile "./output/category_5_BED-ins_by_gridss.annotated.tsv"


# tail -1 ./input/input-ins_by_gridss.bed
# 13      53040040        53040041        ns_by_gridss    INS     ATATATATACACAC

BEDresult=`$cut "./output/category_5_BED-ins_by_gridss.annotated.tsv" "SV_length" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$BEDresult" != " " ]
then
        echo "Error with category_5 (BED ins)"
        exit 1
fi

echo "Category_5 (BED ins) OK"


# input-inv.bed
###############

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-inv.bed" -svtBEDcol 5 -outputFile "./output/category_5_BED-inv.annotated.tsv"

# tail -1 ./input/input-inv.bed
# 3       2998    5000    breakend_inv_1_a        INV

BEDresult=`$cut "./output/category_5_BED-inv.annotated.tsv" "SV_length" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$BEDresult" != "2002 " ]
then
        echo "Error with category_5 (BED inv)"
        exit 1
fi

echo "Category_5 (BED inv) OK"


# input-tra.bed
###############

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/input-tra.bed" -svtBEDcol 5 -outputFile "./output/category_5_BED-tra.annotated.tsv"

# tail -2 ./input/input-tra.bed
# 2       321681  321682  tra_a   TRA
# 13      123455  123456  tra_b   TRA

BEDresult=`$cut "./output/category_5_BED-tra.annotated.tsv" "SV_length" | grep -v "full=" | tail -1 | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$BEDresult" != "0 " ]
then
        echo "Error with category_5 (BED tra)"
        exit 1
fi
echo "Category_5 (BED tra) OK"

################################################################
################################################################
################################################################

echo "ok - Finished"




================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-angle-bracketed-del.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
12	3000	breakend_del_1_a	T	<DEL>	.	PASS	END=5000;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-angle-bracketed-dup.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	3000	breakend_dup_a	T	<DUP>	.	PASS	END=5000EXTRA=DUP_PAIRED;MATEID=breakend_dup_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-angle-bracketed-inv.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
3	2999	breakend_inv_1_a	T	<INV>	.	PASS	END=5000;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-angle-bracketed-tra.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	321682	tra_a	T	<TRA>	.	PASS	SVTYPE=BND;CHR2=13;END=123456	GT	0/0	0/1
13	123456	tra_b	C	<TRA>	.	PASS	SVTYPE=BND;CHR2=2;END=321682	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-del.bed
================================================
12	2999	5000	breakend_del_1_a	DEL


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-dup.bed
================================================
2	2999	5000	breakend_dup_a	DUP


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-ins_by_gridss.bed
================================================
13	53040040	53040041	ns_by_gridss	INS	ATATATATACACAC 


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-inv.bed
================================================
3	2998	5000	breakend_inv_1_a	INV


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-square-bracketed-del.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
12	3000	breakend_del_1_a	T	T[12:5000[	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b	GT	0/0	0/1
12	5000	breakend_del_1_b	T	]12:3000]T	.	PASS	SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-square-bracketed-dup.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	3000	breakend_dup_a	T	]2:5000]T	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b	GT	0/0	0/1
2	5000	breakend_dup_b	T	T[2:3000[	.	PASS	SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-square-bracketed-ins_by_gridss.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
13	53040041	ins_by_gridss	T	TATATATATACACAC[13:53040042[	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1
13	53040042	ins_by_gridss	A	]13:53040041]ATATATATACACACA	.	PASS	SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-square-bracketed-inv.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
3	2999	breakend_inv_1_a	T	T]3:5000]	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b	GT	0/0	0/1
3	5000	breakend_inv_1_b	T	[3:2999[T	.	PASS	SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-square-bracketed-tra.vcf
================================================
##fileformat=VCFv4.1
##contig=<ID=1,length=249250621>
##contig=<ID=2,length=243199373>
##contig=<ID=3,length=198022430>
##contig=<ID=4,length=191154276>
##contig=<ID=5,length=180915260>
##contig=<ID=6,length=171115067>
##contig=<ID=7,length=159138663>
##contig=<ID=8,length=146364022>
##contig=<ID=9,length=141213431>
##contig=<ID=10,length=135534747>
##contig=<ID=11,length=135006516>
##contig=<ID=12,length=133851895>
##contig=<ID=13,length=115169878>
##contig=<ID=14,length=107349540>
##contig=<ID=15,length=102531392>
##contig=<ID=16,length=90354753>
##contig=<ID=17,length=81195210>
##contig=<ID=18,length=78077248>
##contig=<ID=19,length=59128983>
##contig=<ID=20,length=63025520>
##contig=<ID=21,length=48129895>
##contig=<ID=22,length=51304566>
##contig=<ID=X,length=155270560>
##contig=<ID=Y,length=59373566>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Length of the SV">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of the SV">
##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description="Vector of supporting technologies">
##INFO=<ID=GENE,Number=.,Type=String,Description="Gene(s) overlap in breakpoint">
##INFO=<ID=CLUSTER,Number=.,Type=String,Description="IDs of other clustered breakpoints">
##INFO=<ID=EXTRA,Number=.,Type=String,Description="Extra info for testing">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR
2	321682	tra_a	T	]13:123456]T	.	PASS	SVTYPE=BND	GT	0/0	0/1
13	123456	tra_b	C	C[2:321682[	.	PASS	SVTYPE=BND	GT	0/0	0/1


================================================
FILE: tests/AnnotSV/test_37_SVLEN/input/input-tra.bed
================================================
2	321681	321682	tra_a	TRA
13	123455	123456	tra_b	TRA


================================================
FILE: tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/README
================================================
##############################################################################################
#
#                                         INSERTIONS
#
##############################################################################################


# List of the different "tags/flags" used in the VCF INFO column to specify the inserted sequence
#################################################################################################

=> INS, INSERTED_SEQUENCE, SVINSSEQ, INSSEQ, SEQ, CONSENSUS


# GATK, ANNOVAR
INS=ACG 

# tools derived from Mutalyzer
INSERTED_SEQUENCE=ACG

# Manta
SVINSLEN
SVINSSEQ
LEFT_SVINSSEQ
RIGHT_SVINSSEQ

# DRAGEN (Illumina)
SVINSSEQ
SVINSLEN

# Severus
INSSEQ

# Sniffles2
SEQ			Sniffles2

# some long-read custom pipelines
CONSENSUS	consensus sequence de l’insertion

# bcftools
accept SVINSSEQ




# Tests with 2 INS that have the same position but different SVLENs
###################################################################

# chr18   1963003 cuteSV.INS.4743 .       <INS>   19      PASS    SVLEN=1512;SVTYPE=INS;CHR2=chr18;END=1963003    GT      0/1
# chr18   1963003 cuteSV.INS.4744 .       <INS>   50      PASS    SVLEN=51;SVTYPE=INS;CHR2=chr18;END=1963003      GT      0/1
time $ANNOTSVDEV/bin/AnnotSV -SVinputFile test_INS_1.vcf -outputFile ./output/test_INS_1.annotated.tsv

cut -f 1 ./test_INS_1.annotated.tsv
AnnotSV_ID
18_1963003_1963003_INS_1
18_1963003_1963003_INS_2
=> Ok


# Tests with 2 INS that have the same position but different inserted sequences
###############################################################################

# chr18   1963003 cuteSV.INS.4743 .       <INS>   19      PASS    SVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGAAAACCGT        GT      0/1
# chr18   1963003 cuteSV.INS.4744 .       <INS>   50      PASS    SVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT     GT      0/1
time $ANNOTSVDEV/bin/AnnotSV -SVinputFile test_INS_2.vcf -outputFile ./output/test_INS_2.annotated.tsv

cut -f 1 ./test_INS_2.annotated.tsv
AnnotSV_ID
18_1963003_1963003_INS_1
18_1963003_1963003_INS_2
=> Ok


# chr2    79197378        oo      A       AATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT[chr2:79198779[      352     PASS    SVTYPE=BND      GT:FT   0/1:PASS
# chr2    79197378        pp      A       AATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTTAATGCCGTATGCTTGTAAT[chr2:79198779[  352     PASS    SVTYPE=BND      GT:FT   0/1:PASS
time $ANNOTSVDEV/bin/AnnotSV -SVinputFile test_INS_3.vcf -outputFile ./output/test_INS_3.annotated.tsv

cut -f 1,16 ./test_INS_3.annotated.tsv | gr full
2_79197378_79198779_DEL_1       full
2_79197378_79198779_DEL_2       full
=> Ok







================================================
FILE: tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail

###################################################################
####                                                           ####
####       Check the AnnotSV_ID for INS with same POS          ####
####                                                           ####
###################################################################

mkdir -p ./output
rm -f ./output/*.annotated.tsv


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"


# Tests with 2 INS that have the same position but different SVLENs
###################################################################

$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test_INS_1.vcf" -outputFile "./output/test_INS_1.annotated.tsv"

result=`$cut "./output/test_INS_1.annotated.tsv" "AnnotSV_ID" | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$result" != "AnnotSV_ID 18_1963003_1963003_INS_1 18_1963003_1963003_INS_2 " ]
then
        echo "Error with test_INS_1"
        exit 1
fi

echo "test_INS_1 OK"


# Tests with 2 INS that have the same position but different inserted sequences
###############################################################################

# angular bracketed ALT
$ANNOTSV/bin/AnnotSV -SVinputFile "./input/test_INS_2.vcf" -outputFile "./output/test_INS_2.annotated.tsv"

result=`$cut "./output/test_INS_2.annotated.tsv" "AnnotSV_ID" | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$result" != "AnnotSV_ID 18_1963003_1963003_INS_1 18_1963003_1963003_INS_2 " ]
then
        echo "Error with test_INS_2"
        exit 1
fi

echo "test_INS_2 OK"


# square bracketed ALT
$ANNOTSVDEV/bin/AnnotSV -SVinputFile "./input/test_INS_3.vcf" -outputFile "./output/test_INS_3.annotated.tsv"

result=`$cut "./output/test_INS_3.annotated.tsv" "AnnotSV_ID;Annotation_mode" | grep "full"  | awk 'BEGIN{ORS=" "; OFS=" "} { print $1 }'`
if [ "$result" != "2_79197378_79197378_INS_1 2_79197378_79197378_INS_2 " ]
then
        echo "Error with test_INS_3"
        exit 1
fi

echo "test_INS_3 OK"


################################################################
################################################################
################################################################

echo "ok - Finished"



================================================
FILE: tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/input/test_INS_1.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT
chr18	1963003	cuteSV.INS.4743	.	<INS>	19	PASS	SVLEN=1512;SVTYPE=INS;CHR2=chr18;END=1963003	GT	0/1
chr18	1963003	cuteSV.INS.4744	.	<INS>	50	PASS	SVLEN=51;SVTYPE=INS;CHR2=chr18;END=1963003	GT	0/1


================================================
FILE: tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/input/test_INS_2.vcf
================================================
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT
chr18	1963003	cuteSV.INS.4743	.	<INS>	19	PASS	SVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGAAAACCGT	GT	0/1
chr18	1963003	cuteSV.INS.4744	.	<INS>	50	PASS	SVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT	GT	0/1


================================================
FILE: tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/input/test_INS_3.vcf
================================================
##fileformat=VCFv4.1
##reference=hg38
##contig=<ID=chr2,length=242193529>
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	manta
chr2	79197378	oo	A	AATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT[chr2:79197379[	352	PASS	SVTYPE=BND	GT:FT	0/1:PASS
chr2	79197378	pp	A	AATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTTAATGCCGTATGCTTGTAAT[chr2:79197379[	352	PASS	SVTYPE=BND	GT:FT	0/1:PASS


================================================
FILE: tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/test_INS_1.annotated.tsv
================================================
AnnotSV_ID	SV_chrom	SV_start	SV_end	SV_length	SV_type	Samples_ID	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	Annotation_mode	CytoBand	Gene_name	Closest_left	Closest_right	Gene_count	Tx	Tx_version	Tx_start	Tx_end	Overlapped_tx_length	Overlapped_CDS_length	Overlapped_CDS_percent	Frameshift	Exon_count	Location	Location2	Dist_nearest_SS	Nearest_SS_type	Intersect_start	Intersect_end	RE_gene	P_gain_phen	P_gain_hpo	P_gain_source	P_gain_coord	P_loss_phen	P_loss_hpo	P_loss_source	P_loss_coord	P_ins_phen	P_ins_hpo	P_ins_source	P_ins_coord	po_P_gain_phen	po_P_gain_hpo	po_P_gain_source	po_P_gain_coord	po_P_gain_percent	po_P_loss_phen	po_P_loss_hpo	po_P_loss_source	po_P_loss_coord	po_P_loss_percent	P_snvindel_nb	P_snvindel_phen	B_gain_source	B_gain_coord	B_gain_AFmax	B_loss_source	B_loss_coord	B_loss_AFmax	B_ins_source	B_ins_coord	B_ins_AFmax	B_inv_source	B_inv_coord	B_inv_AFmax	po_B_gain_allG_source	po_B_gain_allG_coord	po_B_gain_someG_source	po_B_gain_someG_coord	po_B_loss_allG_source	po_B_loss_allG_coord	po_B_loss_someG_source	po_B_loss_someG_coord	GC_content_left	GC_content_right	Repeat_coord_left	Repeat_type_left	Repeat_coord_right	Repeat_type_right	Gap_left	Gap_right	SegDup_left	SegDup_right	ENCODE_blacklist_left	ENCODE_blacklist_characteristics_left	ENCODE_blacklist_right	ENCODE_blacklist_characteristics_right	ACMG	HI	TS	DDD_HI_percent	ExAC_delZ	ExAC_dupZ	ExAC_cnvZ	ExAC_synZ	ExAC_misZ	GenCC_disease	GenCC_moi	GenCC_classification	GenCC_pmid	NCBI_gene_ID	HGNC_gene_ID	OMIM_ID	OMIM_phenotype	OMIM_inheritance	OMIM_morbid	OMIM_morbid_candidate	LOEUF_bin	GnomAD_pLI	ExAC_pLI	AnnotSV_ranking_score	AnnotSV_ranking_criteria	ACMG_class
18_1963003_1963003_INS_1	18	1963003	1963003	1512	INS		cuteSV.INS.4743	.	<INS>_1512	19	PASS	SVLEN=1512;SVTYPE=INS;CHR2=18;END=1963003	GT	full	p11.32		LOC105371958	LOC105371957	0																															dbVar:nssv15147091;dbVar:nssv17976993;dbVar:nssv15174218;dbVar:nssv15173597;dbVar:nssv15148163;dbVar:nssv17976674;dbVar:nssv15146418;dbVar:nssv15146417;dbVar:nssv15147372;dbVar:nssv15147412;dbVar:nssv15120382;dbVar:nssv15146781;dbVar:nssv17969147;dbVar:nssv15153904;dbVar:nssv15148900;dbVar:nssv15146776;nssv15149912;nssv15153905;nssv17969149;dbVar:nssv15151158;dbVar:nssv15151280;dbVar:nssv17956154;dbVar:nssv15148237;nssv17969152;dbVar:nssv15149976;dbVar:nssv15148196;nssv15150633;dbVar:nssv15148050;dbVar:nssv15147095;dbVar:nssv15133614;dbVar:nssv15145762;dbVar:nssv15146335;nssv15148275;dbVar:nssv15137988;dbVar:nssv15147988;dbVar:nssv15147431;dbVar:nssv15146963;dbVar:nssv15147830;dbVar:nssv15147673;dbVar:nssv15121122;dbVar:nssv15147569;nssv15153169;dbVar:nssv15152479;dbVar:nssv15146422	18:10002-15380684;18:10002-80259271;18:12843-80257297;18:13035-80257297;18:14317-14206225;18:47391-14854038;18:53346-20948503;18:53346-80209986;18:118761-14089410;18:118761-80254946;18:131501-4421014;18:136227-14337134;18:136227-14384327;18:136227-15157837;18:136227-15175006;18:136227-15198991;18:136227-20941324;18:136227-24077826;18:136227-27672312;18:136227-80256240;18:136228-48644682;18:136228-80256240;18:148964-14081888;18:148964-21040153;18:148964-2221286;18:148964-80244381;18:148964-80252149;18:149090-5458472;18:149090-80234391;18:149090-80254936;18:163324-15102599;18:163324-80247302;18:163324-80247353;18:180231-4199943;18:416491-8638372;18:958974-15181667;18:1919685-15325188	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dbVar:nssv15150750;dbVar:nssv18792749;dbVar:nssv18326322;dbVar:nssv17955800;dbVar:nssv15151907;dbVar:nssv16208662;dbVar:nssv15151600;dbVar:nssv15130561;dbVar:nssv15128089;dbVar:nssv15127405;dbVar:nssv15128420;dbVar:nssv15147574;dbVar:nssv15147565;dbVar:nssv15148923;dbVar:nssv15134419;dbVar:nssv17650012;dbVar:nssv15137462;dbVar:nssv15146527;dbVar:nssv15146463;dbVar:nssv15146728;dbVar:nssv15147522;dbVar:nssv15134538;dbVar:nssv15137735;dbVar:nssv15136586;dbVar:nssv15148875;dbVar:nssv15174219;dbVar:nssv15147189;dbVar:nssv15147175;dbVar:nssv15146528;dbVar:nssv15121941;dbVar:nssv15145886;dbVar:nssv15152476;dbVar:nssv17976907;dbVar:nssv15155582;dbVar:nssv17969146;dbVar:nssv16208985;dbVar:nssv17977099;dbVar:nssv17969148;dbVar:nssv15150379;dbVar:nssv16208986;dbVar:nssv15152480;dbVar:nssv15151881;nssv17969150;dbVar:nssv16208516;dbVar:nssv15138130;dbVar:nssv16255074;dbVar:nssv16208981;dbVar:nssv15137029;dbVar:nssv15139629;dbVar:nssv15152473;dbVar:nssv15141983;dbVar:nssv16208512;dbVar:nssv17969145;dbVar:nssv17976908;dbVar:nssv15156230;dbVar:nssv18329625;dbVar:nssv18330775;dbVar:nssv16208515;dbVar:nssv15148109;dbVar:nssv15146561;dbVar:nssv15146560;dbVar:nssv15145673;dbVar:nssv15145680;nssv15146802;dbVar:nssv15135459;dbVar:nssv15133988;dbVar:nssv15136818;dbVar:nssv18841839;dbVar:nssv15149109;dbVar:nssv15148103;dbVar:nssv16208513;dbVar:nssv15148944;dbVar:nssv16208514;dbVar:nssv17955847	18:10002-15157837;18:10002-15400036;18:10002-8638262;18:10502-15410399;18:13035-15026310;18:13035-15330526;18:13035-15375879;18:14276-12811388;18:14276-13649734;18:14276-20949945;18:14276-8779843;18:14317-10784608;18:14317-15328500;18:48783-14978076;18:53345-7029134;18:64997-6838316;18:85433-7094700;18:112260-14122522;18:112260-9135777;18:118761-14089410;18:118761-15024003;18:118761-4342182;18:118761-4470508;18:118761-6275718;18:118761-8999132;18:124336-14139007;18:131701-10536767;18:131701-14226905;18:131701-15121055;18:131701-3279166;18:133158-14089410;18:136227-10074736;18:136227-10172944;18:136227-12767080;18:136227-13655147;18:136227-13894430;18:136227-14632437;18:136227-14983939;18:136227-15157837;18:136227-15175006;18:136227-15198990;18:136227-15198991;18:136227-20949617;18:136227-2994136;18:136227-3415480;18:136227-3502495;18:136227-4002983;18:136227-4802275;18:136227-4925311;18:136227-5323942;18:136227-5407840;18:136227-6103500;18:136227-7131133;18:136227-8057396;18:136228-11283185;18:136228-7218596;18:136305-15143715;18:148964-10900517;18:148964-13068104;18:148964-13530126;18:148964-13715860;18:148964-14081888;18:148964-2313458;18:148964-6086668;18:149090-5276567;18:158287-14124574;18:163324-14103972;18:180230-10762632;18:544118-5679225;18:958975-11954935;18:971295-11250448;18:1262334-55587520	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dbVar	chr18:1723989-2065652	0.01	DDD:50513;DDD:50515;dbVar;esv2656686	18:1902886-1980786;chr18:1903085-1984841;chr18:1903091-1984846;18:1904022-1983773;chr18:1906570-1985565;chr18:1921454-1985565;18:1962720-1963078	0.0213	HPRC:pbsv.INS.214;HPRC:pbsv.INS.215;PacBioCoLoRS	chr18:1963003-1963003;chr18:1963003-1963003;18:1963003-1963003	0.2324	IMH	18:113217-20958919	0.1200			chr18:1723989-2065652 dbVar	chr18:1723989-2065652 dbVar			chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar;18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686	18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686;chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar	0.240	0.235	18:1962555-1963239	(TA)n	18:1962555-1963239	(TA)n																																		NA
18_1963003_1963003_INS_2	18	1963003	1963003	51	INS		cuteSV.INS.4744	.	<INS>_51	50	PASS	SVLEN=51;SVTYPE=INS;CHR2=18;END=1963003	GT	full	p11.32		LOC105371958	LOC105371957	0																															dbVar:nssv15147091;dbVar:nssv17976993;dbVar:nssv15174218;dbVar:nssv15173597;dbVar:nssv15148163;dbVar:nssv17976674;dbVar:nssv15146418;dbVar:nssv15146417;dbVar:nssv15147372;dbVar:nssv15147412;dbVar:nssv15120382;dbVar:nssv15146781;dbVar:nssv17969147;dbVar:nssv15153904;dbVar:nssv15148900;dbVar:nssv15146776;nssv15149912;nssv15153905;nssv17969149;dbVar:nssv15151158;dbVar:nssv15151280;dbVar:nssv17956154;dbVar:nssv15148237;nssv17969152;dbVar:nssv15149976;dbVar:nssv15148196;nssv15150633;dbVar:nssv15148050;dbVar:nssv15147095;dbVar:nssv15133614;dbVar:nssv15145762;dbVar:nssv15146335;nssv15148275;dbVar:nssv15137988;dbVar:nssv15147988;dbVar:nssv15147431;dbVar:nssv15146963;dbVar:nssv15147830;dbVar:nssv15147673;dbVar:nssv15121122;dbVar:nssv15147569;nssv15153169;dbVar:nssv15152479;dbVar:nssv15146422	18:10002-15380684;18:10002-80259271;18:12843-80257297;18:13035-80257297;18:14317-14206225;18:47391-14854038;18:53346-20948503;18:53346-80209986;18:118761-14089410;18:118761-80254946;18:131501-4421014;18:136227-14337134;18:136227-14384327;18:136227-15157837;18:136227-15175006;18:136227-15198991;18:136227-20941324;18:136227-24077826;18:136227-27672312;18:136227-80256240;18:136228-48644682;18:136228-80256240;18:148964-14081888;18:148964-21040153;18:148964-2221286;18:148964-80244381;18:148964-80252149;18:149090-5458472;18:149090-80234391;18:149090-80254936;18:163324-15102599;18:163324-80247302;18:163324-80247353;18:180231-4199943;18:416491-8638372;18:958974-15181667;18:1919685-15325188	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dbVar:nssv15150750;dbVar:nssv18792749;dbVar:nssv18326322;dbVar:nssv17955800;dbVar:nssv15151907;dbVar:nssv16208662;dbVar:nssv15151600;dbVar:nssv15130561;dbVar:nssv15128089;dbVar:nssv15127405;dbVar:nssv15128420;dbVar:nssv15147574;dbVar:nssv15147565;dbVar:nssv15148923;dbVar:nssv15134419;dbVar:nssv17650012;dbVar:nssv15137462;dbVar:nssv15146527;dbVar:nssv15146463;dbVar:nssv15146728;dbVar:nssv15147522;dbVar:nssv15134538;dbVar:nssv15137735;dbVar:nssv15136586;dbVar:nssv15148875;dbVar:nssv15174219;dbVar:nssv15147189;dbVar:nssv15147175;dbVar:nssv15146528;dbVar:nssv15121941;dbVar:nssv15145886;dbVar:nssv15152476;dbVar:nssv17976907;dbVar:nssv15155582;dbVar:nssv17969146;dbVar:nssv16208985;dbVar:nssv17977099;dbVar:nssv17969148;dbVar:nssv15150379;dbVar:nssv16208986;dbVar:nssv15152480;dbVar:nssv15151881;nssv17969150;dbVar:nssv16208516;dbVar:nssv15138130;dbVar:nssv16255074;dbVar:nssv16208981;dbVar:nssv15137029;dbVar:nssv15139629;dbVar:nssv15152473;dbVar:nssv15141983;dbVar:nssv16208512;dbVar:nssv17969145;dbVar:nssv17976908;dbVar:nssv15156230;dbVar:nssv18329625;dbVar:nssv18330775;dbVar:nssv16208515;dbVar:nssv15148109;dbVar:nssv15146561;dbVar:nssv15146560;dbVar:nssv15145673;dbVar:nssv15145680;nssv15146802;dbVar:nssv15135459;dbVar:nssv15133988;dbVar:nssv15136818;dbVar:nssv18841839;dbVar:nssv15149109;dbVar:nssv15148103;dbVar:nssv16208513;dbVar:nssv15148944;dbVar:nssv16208514;dbVar:nssv17955847	18:10002-15157837;18:10002-15400036;18:10002-8638262;18:10502-15410399;18:13035-15026310;18:13035-15330526;18:13035-15375879;18:14276-12811388;18:14276-13649734;18:14276-20949945;18:14276-8779843;18:14317-10784608;18:14317-15328500;18:48783-14978076;18:53345-7029134;18:64997-6838316;18:85433-7094700;18:112260-14122522;18:112260-9135777;18:118761-14089410;18:118761-15024003;18:118761-4342182;18:118761-4470508;18:118761-6275718;18:118761-8999132;18:124336-14139007;18:131701-10536767;18:131701-14226905;18:131701-15121055;18:131701-3279166;18:133158-14089410;18:136227-10074736;18:136227-10172944;18:136227-12767080;18:136227-13655147;18:136227-13894430;18:136227-14632437;18:136227-14983939;18:136227-15157837;18:136227-15175006;18:136227-15198990;18:136227-15198991;18:136227-20949617;18:136227-2994136;18:136227-3415480;18:136227-3502495;18:136227-4002983;18:136227-4802275;18:136227-4925311;18:136227-5323942;18:136227-5407840;18:136227-6103500;18:136227-7131133;18:136227-8057396;18:136228-11283185;18:136228-7218596;18:136305-15143715;18:148964-10900517;18:148964-13068104;18:148964-13530126;18:148964-13715860;18:148964-14081888;18:148964-2313458;18:148964-6086668;18:149090-5276567;18:158287-14124574;18:163324-14103972;18:180230-10762632;18:544118-5679225;18:958975-11954935;18:971295-11250448;18:1262334-55587520	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dbVar	chr18:1723989-2065652	0.01	DDD:50513;DDD:50515;dbVar;esv2656686	18:1902886-1980786;chr18:1903085-1984841;chr18:1903091-1984846;18:1904022-1983773;chr18:1906570-1985565;chr18:1921454-1985565;18:1962720-1963078	0.0213	HPRC:pbsv.INS.214;HPRC:pbsv.INS.215;PacBioCoLoRS	chr18:1963003-1963003;chr18:1963003-1963003;18:1963003-1963003	0.2324	IMH	18:113217-20958919	0.1200			chr18:1723989-2065652 dbVar	chr18:1723989-2065652 dbVar			chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar;18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686	18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686;chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar	0.240	0.235	18:1962555-1963239	(TA)n	18:1962555-1963239	(TA)n																																		NA


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FILE: tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/test_INS_2.annotated.tsv
================================================
AnnotSV_ID	SV_chrom	SV_start	SV_end	SV_length	SV_type	Samples_ID	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	Annotation_mode	CytoBand	Gene_name	Closest_left	Closest_right	Gene_count	Tx	Tx_version	Tx_start	Tx_end	Overlapped_tx_length	Overlapped_CDS_length	Overlapped_CDS_percent	Frameshift	Exon_count	Location	Location2	Dist_nearest_SS	Nearest_SS_type	Intersect_start	Intersect_end	RE_gene	P_gain_phen	P_gain_hpo	P_gain_source	P_gain_coord	P_loss_phen	P_loss_hpo	P_loss_source	P_loss_coord	P_ins_phen	P_ins_hpo	P_ins_source	P_ins_coord	po_P_gain_phen	po_P_gain_hpo	po_P_gain_source	po_P_gain_coord	po_P_gain_percent	po_P_loss_phen	po_P_loss_hpo	po_P_loss_source	po_P_loss_coord	po_P_loss_percent	P_snvindel_nb	P_snvindel_phen	B_gain_source	B_gain_coord	B_gain_AFmax	B_loss_source	B_loss_coord	B_loss_AFmax	B_ins_source	B_ins_coord	B_ins_AFmax	B_inv_source	B_inv_coord	B_inv_AFmax	po_B_gain_allG_source	po_B_gain_allG_coord	po_B_gain_someG_source	po_B_gain_someG_coord	po_B_loss_allG_source	po_B_loss_allG_coord	po_B_loss_someG_source	po_B_loss_someG_coord	GC_content_left	GC_content_right	Repeat_coord_left	Repeat_type_left	Repeat_coord_right	Repeat_type_right	Gap_left	Gap_right	SegDup_left	SegDup_right	ENCODE_blacklist_left	ENCODE_blacklist_characteristics_left	ENCODE_blacklist_right	ENCODE_blacklist_characteristics_right	ACMG	HI	TS	DDD_HI_percent	ExAC_delZ	ExAC_dupZ	ExAC_cnvZ	ExAC_synZ	ExAC_misZ	GenCC_disease	GenCC_moi	GenCC_classification	GenCC_pmid	NCBI_gene_ID	HGNC_gene_ID	OMIM_ID	OMIM_phenotype	OMIM_inheritance	OMIM_morbid	OMIM_morbid_candidate	LOEUF_bin	GnomAD_pLI	ExAC_pLI	AnnotSV_ranking_score	AnnotSV_ranking_criteria	ACMG_class
18_1963003_1963003_INS_1	18	1963003	1963003		INS		cuteSV.INS.4743	.	<INS>_ATGTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGAAAACCGT	19	PASS	SVTYPE=INS;CHR2=18;END=1963003;SVINSSEQ=ATGTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGAAAACCGT	GT	full	p11.32		LOC105371958	LOC105371957	0																															dbVar:nssv15147091;dbVar:nssv17976993;dbVar:nssv15174218;dbVar:nssv15173597;dbVar:nssv15148163;dbVar:nssv17976674;dbVar:nssv15146418;dbVar:nssv15146417;dbVar:nssv15147372;dbVar:nssv15147412;dbVar:nssv15120382;dbVar:nssv15146781;dbVar:nssv17969147;dbVar:nssv15153904;dbVar:nssv15148900;dbVar:nssv15146776;nssv15149912;nssv15153905;nssv17969149;dbVar:nssv15151158;dbVar:nssv15151280;dbVar:nssv17956154;dbVar:nssv15148237;nssv17969152;dbVar:nssv15149976;dbVar:nssv15148196;nssv15150633;dbVar:nssv15148050;dbVar:nssv15147095;dbVar:nssv15133614;dbVar:nssv15145762;dbVar:nssv15146335;nssv15148275;dbVar:nssv15137988;dbVar:nssv15147988;dbVar:nssv15147431;dbVar:nssv15146963;dbVar:nssv15147830;dbVar:nssv15147673;dbVar:nssv15121122;dbVar:nssv15147569;nssv15153169;dbVar:nssv15152479;dbVar:nssv15146422	18:10002-15380684;18:10002-80259271;18:12843-80257297;18:13035-80257297;18:14317-14206225;18:47391-14854038;18:53346-20948503;18:53346-80209986;18:118761-14089410;18:118761-80254946;18:131501-4421014;18:136227-14337134;18:136227-14384327;18:136227-15157837;18:136227-15175006;18:136227-15198991;18:136227-20941324;18:136227-24077826;18:136227-27672312;18:136227-80256240;18:136228-48644682;18:136228-80256240;18:148964-14081888;18:148964-21040153;18:148964-2221286;18:148964-80244381;18:148964-80252149;18:149090-5458472;18:149090-80234391;18:149090-80254936;18:163324-15102599;18:163324-80247302;18:163324-80247353;18:180231-4199943;18:416491-8638372;18:958974-15181667;18:1919685-15325188	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dbVar:nssv15150750;dbVar:nssv18792749;dbVar:nssv18326322;dbVar:nssv17955800;dbVar:nssv15151907;dbVar:nssv16208662;dbVar:nssv15151600;dbVar:nssv15130561;dbVar:nssv15128089;dbVar:nssv15127405;dbVar:nssv15128420;dbVar:nssv15147574;dbVar:nssv15147565;dbVar:nssv15148923;dbVar:nssv15134419;dbVar:nssv17650012;dbVar:nssv15137462;dbVar:nssv15146527;dbVar:nssv15146463;dbVar:nssv15146728;dbVar:nssv15147522;dbVar:nssv15134538;dbVar:nssv15137735;dbVar:nssv15136586;dbVar:nssv15148875;dbVar:nssv15174219;dbVar:nssv15147189;dbVar:nssv15147175;dbVar:nssv15146528;dbVar:nssv15121941;dbVar:nssv15145886;dbVar:nssv15152476;dbVar:nssv17976907;dbVar:nssv15155582;dbVar:nssv17969146;dbVar:nssv16208985;dbVar:nssv17977099;dbVar:nssv17969148;dbVar:nssv15150379;dbVar:nssv16208986;dbVar:nssv15152480;dbVar:nssv15151881;nssv17969150;dbVar:nssv16208516;dbVar:nssv15138130;dbVar:nssv16255074;dbVar:nssv16208981;dbVar:nssv15137029;dbVar:nssv15139629;dbVar:nssv15152473;dbVar:nssv15141983;dbVar:nssv16208512;dbVar:nssv17969145;dbVar:nssv17976908;dbVar:nssv15156230;dbVar:nssv18329625;dbVar:nssv18330775;dbVar:nssv16208515;dbVar:nssv15148109;dbVar:nssv15146561;dbVar:nssv15146560;dbVar:nssv15145673;dbVar:nssv15145680;nssv15146802;dbVar:nssv15135459;dbVar:nssv15133988;dbVar:nssv15136818;dbVar:nssv18841839;dbVar:nssv15149109;dbVar:nssv15148103;dbVar:nssv16208513;dbVar:nssv15148944;dbVar:nssv16208514;dbVar:nssv17955847	18:10002-15157837;18:10002-15400036;18:10002-8638262;18:10502-15410399;18:13035-15026310;18:13035-15330526;18:13035-15375879;18:14276-12811388;18:14276-13649734;18:14276-20949945;18:14276-8779843;18:14317-10784608;18:14317-15328500;18:48783-14978076;18:53345-7029134;18:64997-6838316;18:85433-7094700;18:112260-14122522;18:112260-9135777;18:118761-14089410;18:118761-15024003;18:118761-4342182;18:118761-4470508;18:118761-6275718;18:118761-8999132;18:124336-14139007;18:131701-10536767;18:131701-14226905;18:131701-15121055;18:131701-3279166;18:133158-14089410;18:136227-10074736;18:136227-10172944;18:136227-12767080;18:136227-13655147;18:136227-13894430;18:136227-14632437;18:136227-14983939;18:136227-15157837;18:136227-15175006;18:136227-15198990;18:136227-15198991;18:136227-20949617;18:136227-2994136;18:136227-3415480;18:136227-3502495;18:136227-4002983;18:136227-4802275;18:136227-4925311;18:136227-5323942;18:136227-5407840;18:136227-6103500;18:136227-7131133;18:136227-8057396;18:136228-11283185;18:136228-7218596;18:136305-15143715;18:148964-10900517;18:148964-13068104;18:148964-13530126;18:148964-13715860;18:148964-14081888;18:148964-2313458;18:148964-6086668;18:149090-5276567;18:158287-14124574;18:163324-14103972;18:180230-10762632;18:544118-5679225;18:958975-11954935;18:971295-11250448;18:1262334-55587520	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dbVar	chr18:1723989-2065652	0.01	DDD:50513;DDD:50515;dbVar;esv2656686	18:1902886-1980786;chr18:1903085-1984841;chr18:1903091-1984846;18:1904022-1983773;chr18:1906570-1985565;chr18:1921454-1985565;18:1962720-1963078	0.0213	HPRC:pbsv.INS.214;HPRC:pbsv.INS.215;PacBioCoLoRS	chr18:1963003-1963003;chr18:1963003-1963003;18:1963003-1963003	0.2324	IMH	18:113217-20958919	0.1200			chr18:1723989-2065652 dbVar	chr18:1723989-2065652 dbVar			chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar;18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686	18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686;chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar	0.240	0.235	18:1962555-1963239	(TA)n	18:1962555-1963239	(TA)n																																		NA
18_1963003_1963003_INS_2	18	1963003	1963003		INS		cuteSV.INS.4744	.	<INS>_ATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT	50	PASS	SVTYPE=INS;CHR2=18;END=1963003;SVINSSEQ=ATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT	GT	full	p11.32		LOC105371958	LOC105371957	0																															dbVar:nssv15147091;dbVar:nssv17976993;dbVar:nssv15174218;dbVar:nssv15173597;dbVar:nssv15148163;dbVar:nssv17976674;dbVar:nssv15146418;dbVar:nssv15146417;dbVar:nssv15147372;dbVar:nssv15147412;dbVar:nssv15120382;dbVar:nssv15146781;dbVar:nssv17969147;dbVar:nssv15153904;dbVar:nssv15148900;dbVar:nssv15146776;nssv15149912;nssv15153905;nssv17969149;dbVar:nssv15151158;dbVar:nssv15151280;dbVar:nssv17956154;dbVar:nssv15148237;nssv17969152;dbVar:nssv15149976;dbVar:nssv15148196;nssv15150633;dbVar:nssv15148050;dbVar:nssv15147095;dbVar:nssv15133614;dbVar:nssv15145762;dbVar:nssv15146335;nssv15148275;dbVar:nssv15137988;dbVar:nssv15147988;dbVar:nssv15147431;dbVar:nssv15146963;dbVar:nssv15147830;dbVar:nssv15147673;dbVar:nssv15121122;dbVar:nssv15147569;nssv15153169;dbVar:nssv15152479;dbVar:nssv15146422	18:10002-15380684;18:10002-80259271;18:12843-80257297;18:13035-80257297;18:14317-14206225;18:47391-14854038;18:53346-20948503;18:53346-80209986;18:118761-14089410;18:118761-80254946;18:131501-4421014;18:136227-14337134;18:136227-14384327;18:136227-15157837;18:136227-15175006;18:136227-15198991;18:136227-20941324;18:136227-24077826;18:136227-27672312;18:136227-80256240;18:136228-48644682;18:136228-80256240;18:148964-14081888;18:148964-21040153;18:148964-2221286;18:148964-80244381;18:148964-80252149;18:149090-5458472;18:149090-80234391;18:149090-80254936;18:163324-15102599;18:163324-80247302;18:163324-80247353;18:180231-4199943;18:416491-8638372;18:958974-15181667;18:1919685-15325188	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dbVar:nssv15150750;dbVar:nssv18792749;dbVar:nssv18326322;dbVar:nssv17955800;dbVar:nssv15151907;dbVar:nssv16208662;dbVar:nssv15151600;dbVar:nssv15130561;dbVar:nssv15128089;dbVar:nssv15127405;dbVar:nssv15128420;dbVar:nssv15147574;dbVar:nssv15147565;dbVar:nssv15148923;dbVar:nssv15134419;dbVar:nssv17650012;dbVar:nssv15137462;dbVar:nssv15146527;dbVar:nssv15146463;dbVar:nssv15146728;dbVar:nssv15147522;dbVar:nssv15134538;dbVar:nssv15137735;dbVar:nssv15136586;dbVar:nssv15148875;dbVar:nssv15174219;dbVar:nssv15147189;dbVar:nssv15147175;dbVar:nssv15146528;dbVar:nssv15121941;dbVar:nssv15145886;dbVar:nssv15152476;dbVar:nssv17976907;dbVar:nssv15155582;dbVar:nssv17969146;dbVar:nssv16208985;dbVar:nssv17977099;dbVar:nssv17969148;dbVar:nssv15150379;dbVar:nssv16208986;dbVar:nssv15152480;dbVar:nssv15151881;nssv17969150;dbVar:nssv16208516;dbVar:nssv15138130;dbVar:nssv16255074;dbVar:nssv16208981;dbVar:nssv15137029;dbVar:nssv15139629;dbVar:nssv15152473;dbVar:nssv15141983;dbVar:nssv16208512;dbVar:nssv17969145;dbVar:nssv17976908;dbVar:nssv15156230;dbVar:nssv18329625;dbVar:nssv18330775;dbVar:nssv16208515;dbVar:nssv15148109;dbVar:nssv15146561;dbVar:nssv15146560;dbVar:nssv15145673;dbVar:nssv15145680;nssv15146802;dbVar:nssv15135459;dbVar:nssv15133988;dbVar:nssv15136818;dbVar:nssv18841839;dbVar:nssv15149109;dbVar:nssv15148103;dbVar:nssv16208513;dbVar:nssv15148944;dbVar:nssv16208514;dbVar:nssv17955847	18:10002-15157837;18:10002-15400036;18:10002-8638262;18:10502-15410399;18:13035-15026310;18:13035-15330526;18:13035-15375879;18:14276-12811388;18:14276-13649734;18:14276-20949945;18:14276-8779843;18:14317-10784608;18:14317-15328500;18:48783-14978076;18:53345-7029134;18:64997-6838316;18:85433-7094700;18:112260-14122522;18:112260-9135777;18:118761-14089410;18:118761-15024003;18:118761-4342182;18:118761-4470508;18:118761-6275718;18:118761-8999132;18:124336-14139007;18:131701-10536767;18:131701-14226905;18:131701-15121055;18:131701-3279166;18:133158-14089410;18:136227-10074736;18:136227-10172944;18:136227-12767080;18:136227-13655147;18:136227-13894430;18:136227-14632437;18:136227-14983939;18:136227-15157837;18:136227-15175006;18:136227-15198990;18:136227-15198991;18:136227-20949617;18:136227-2994136;18:136227-3415480;18:136227-3502495;18:136227-4002983;18:136227-4802275;18:136227-4925311;18:136227-5323942;18:136227-5407840;18:136227-6103500;18:136227-7131133;18:136227-8057396;18:136228-11283185;18:136228-7218596;18:136305-15143715;18:148964-10900517;18:148964-13068104;18:148964-13530126;18:148964-13715860;18:148964-14081888;18:148964-2313458;18:148964-6086668;18:149090-5276567;18:158287-14124574;18:163324-14103972;18:180230-10762632;18:544118-5679225;18:958975-11954935;18:971295-11250448;18:1262334-55587520	0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00			dbVar	chr18:1723989-2065652	0.01	DDD:50513;DDD:50515;dbVar;esv2656686	18:1902886-1980786;chr18:1903085-1984841;chr18:1903091-1984846;18:1904022-1983773;chr18:1906570-1985565;chr18:1921454-1985565;18:1962720-1963078	0.0213	HPRC:pbsv.INS.214;HPRC:pbsv.INS.215;PacBioCoLoRS	chr18:1963003-1963003;chr18:1963003-1963003;18:1963003-1963003	0.2324	IMH	18:113217-20958919	0.1200			chr18:1723989-2065652 dbVar	chr18:1723989-2065652 dbVar			chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar;18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686	18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686;chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar	0.240	0.235	18:1962555-1963239	(TA)n	18:1962555-1963239	(TA)n																																		NA


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FILE: tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/test_INS_3.annotated.tsv
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AnnotSV_ID	SV_chrom	SV_start	SV_end	SV_length	SV_type	Samples_ID	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	manta	Annotation_mode	CytoBand	Gene_name	Closest_left	Closest_right	Gene_count	Tx	Tx_version	Tx_start	Tx_end	Overlapped_tx_length	Overlapped_CDS_length	Overlapped_CDS_percent	Frameshift	Exon_count	Location	Location2	Dist_nearest_SS	Nearest_SS_type	Intersect_start	Intersect_end	RE_gene	P_gain_phen	P_gain_hpo	P_gain_source	P_gain_coord	P_loss_phen	P_loss_hpo	P_loss_source	P_loss_coord	P_ins_phen	P_ins_hpo	P_ins_source	P_ins_coord	po_P_gain_phen	po_P_gain_hpo	po_P_gain_source	po_P_gain_coord	po_P_gain_percent	po_P_loss_phen	po_P_loss_hpo	po_P_loss_source	po_P_loss_coord	po_P_loss_percent	P_snvindel_nb	P_snvindel_phen	B_gain_source	B_gain_coord	B_gain_AFmax	B_loss_source	B_loss_coord	B_loss_AFmax	B_ins_source	B_ins_coord	B_ins_AFmax	B_inv_source	B_inv_coord	B_inv_AFmax	po_B_gain_allG_source	po_B_gain_allG_coord	po_B_gain_someG_source	po_B_gain_someG_coord	po_B_loss_allG_source	po_B_loss_allG_coord	po_B_loss_someG_source	po_B_loss_someG_coord	GC_content_left	GC_content_right	Repeat_coord_left	Repeat_type_left	Repeat_coord_right	Repeat_type_right	Gap_left	Gap_right	SegDup_left	SegDup_right	ENCODE_blacklist_left	ENCODE_blacklist_characteristics_left	ENCODE_blacklist_right	ENCODE_blacklist_characteristics_right	ACMG	HI	TS	DDD_HI_percent	ExAC_delZ	ExAC_dupZ	ExAC_cnvZ	ExAC_synZ	ExAC_misZ	GenCC_disease	GenCC_moi	GenCC_classification	GenCC_pmid	NCBI_gene_ID	HGNC_gene_ID	OMIM_ID	OMIM_phenotype	OMIM_inheritance	OMIM_morbid	OMIM_morbid_candidate	LOEUF_bin	GnomAD_pLI	ExAC_pLI	AnnotSV_ranking_score	AnnotSV_ranking_criteria	ACMG_class
2_79197378_79198779_DEL_1	2	79197378	79198779	-1401	DEL	manta	oo	A	AATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT[chr2:79198779[	352	PASS	SVTYPE=BND	GT:FT:GQ:PL:PR:SR	0/1:PASS:352:402,0,999:52,4:48,13	full	p12	CTNNA2	REG3A	LOC105374823	1																															dbVar:nssv17976961;dbVar:nssv15161685;nssv15161863;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv15143557;dbVar:nssv15135243;dbVar:nssv15151660;dbVar:nssv15148009	2:10002-242157305;2:12772-241841232;2:14239-242106609;2:15673-242157305;2:47620389-86702722;2:58279520-83586962;2:63444213-85470879;2:77025217-90282666	0.00;0.00;0.00;0.00;0.00;0.01;0.01;0.01			dbVar:nssv18326420;dbVar:nssv15155128;dbVar:nssv15124851;dbVar:nssv15149506;dbVar:nssv15152719;dbVar:nssv15772092;dbVar:nssv15774928	2:11364193-110608419;2:40379903-146145196;2:50659295-242160331;2:74138358-88829551;2:74300396-88825975;2:74744954-82816769;2:77679989-87103842	0.00;0.00;0.00;0.01;0.01;0.02;0.01			dbVar	chr2:78399873-79766874	0.01							IMH	2:65359567-213949290	0.3179			chr2:78399873-79766874 dbVar	chr2:78399873-79766874 dbVar					0.435	0.260	2:79197161-79197571	MER89	2:79198809-79199191	LTR37A												2.24	0.510687095306386	-0.707558501874858	-0.278346460088322	-0.117358477638256	4.64228208592982							114025			yes		1	4.2501e-01	9.9972e-01	0.0	1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00);2C-2 (CTNNA2,+0.00);3A (1 gene, +0.00);5F (+0.00)	3
2_79197378_79198779_DEL_1	2	79197378	79198779	-1401	DEL	manta	oo	A	AATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT[chr2:79198779[	352	PASS	SVTYPE=BND	GT:FT:GQ:PL:PR:SR	0/1:PASS:352:402,0,999:52,4:48,13	split	p12	CTNNA2				NM_001399737	1	79185376	80648780	1402	0	0	no	22	intron1-intron2	5'UTR	581	3'	79197377	79198779																										dbVar	chr2:78399873-79766874	0.01							IMH	2:65359567-213949290	0.3179																										2.24	0.510687095306386	-0.707558501874858	-0.278346460088322	-0.117358477638256	4.64228208592982	cortical dysplasia, complex, with other brain malformations 9	AR	Moderate;Strong	24986827;26700408;28250917;28600779;29302074;30013181	1496	HGNC:2510	114025	Cortical dysplasia, complex, with other brain malformations 9, 618174 (3) AR	AR	yes		1	4.2501e-01	9.9972e-01			full=3
2_79197378_79198779_DEL_2	2	79197378	79198779	-1401	DEL	manta	pp	A	AATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTTAATGCCGTATGCTTGTAAT[chr2:79198779[	352	PASS	SVTYPE=BND	GT:FT	0/1:PASS	full	p12	CTNNA2	REG3A	LOC105374823	1																															dbVar:nssv17976961;dbVar:nssv15161685;nssv15161863;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv15143557;dbVar:nssv15135243;dbVar:nssv15151660;dbVar:nssv15148009	2:10002-242157305;2:12772-241841232;2:14239-242106609;2:15673-242157305;2:47620389-86702722;2:58279520-83586962;2:63444213-85470879;2:77025217-90282666	0.00;0.00;0.00;0.00;0.00;0.01;0.01;0.01			dbVar:nssv18326420;dbVar:nssv15155128;dbVar:nssv15124851;dbVar:nssv15149506;dbVar:nssv15152719;dbVar:nssv15772092;dbVar:nssv15774928	2:11364193-110608419;2:40379903-146145196;2:50659295-242160331;2:74138358-88829551;2:74300396-88825975;2:74744954-82816769;2:77679989-87103842	0.00;0.00;0.00;0.01;0.01;0.02;0.01			dbVar	chr2:78399873-79766874	0.01							IMH	2:65359567-213949290	0.3179			chr2:78399873-79766874 dbVar	chr2:78399873-79766874 dbVar					0.435	0.260	2:79197161-79197571	MER89	2:79198809-79199191	LTR37A												2.24	0.510687095306386	-0.707558501874858	-0.278346460088322	-0.117358477638256	4.64228208592982							114025			yes		1	4.2501e-01	9.9972e-01	0.0	1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00);2C-2 (CTNNA2,+0.00);3A (1 gene, +0.00);5F (+0.00)	3
2_79197378_79198779_DEL_2	2	79197378	79198779	-1401	DEL	manta	pp	A	AATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTTAATGCCGTATGCTTGTAAT[chr2:79198779[	352	PASS	SVTYPE=BND	GT:FT	0/1:PASS	split	p12	CTNNA2				NM_001399737	1	79185376	80648780	1402	0	0	no	22	intron1-intron2	5'UTR	581	3'	79197377	79198779																										dbVar	chr2:78399873-79766874	0.01							IMH	2:65359567-213949290	0.3179																										2.24	0.510687095306386	-0.707558501874858	-0.278346460088322	-0.117358477638256	4.64228208592982	cortical dysplasia, complex, with other brain malformations 9	AR	Moderate;Strong	24986827;26700408;28250917;28600779;29302074;30013181	1496	HGNC:2510	114025	Cortical dysplasia, complex, with other brain malformations 9, 618174 (3) AR	AR	yes		1	4.2501e-01	9.9972e-01			full=3


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FILE: tests/AnnotSV/test_39_breakpointProximity/command_Tcl.sh
================================================
#!/bin/bash -x

set -eo pipefail


cut="$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl"

function exists_in_list() {
    LIST=$1
    DELIMITER=$2
    VALUE=$3
    [[ "$LIST" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]
}


# Check that user can place an annotation BED file in ".../Users/*/BNDproximity/" and use this BNDproximity mode
################################################################################################################

mkdir -p "./output"
rm -f "./output/*.annotated.tsv"

# Run of AnnotSV with a file in ".../Users/GRCh38/BNDproximity/"
cp ./input/B.bed $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/
$ANNOTSV/bin/AnnotSV -SVinputFile ./input/A.bed -outputFile ./output/A.annotated.tsv -svtBEDcol 4 -genomeBuild GRCh38
rm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/B.formatted.sorted.bed $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/B.header.tsv


result=`$cut "./output/A.annotated.tsv" "AnnotSV_ID;B_annotations_BNDprox" | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2 }'`
if [ "$result" != "AnnotSV_ID B_annotations_BNDprox 1_101_200_DEL_1 B_ann2 1_151_170_DUP_1 B_ann1;B_ann2 " ]
then
        echo "Error with BNDproximity mode"
        exit 1
fi

# Run of AnnotSV with a file in ".../Users/GRCh38/BNDproximity/", and with the "-breakpointProximity" option
cp ./input/B.bed $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/
$ANNOTSV/bin/AnnotSV -SVinputFile ./input/A.bed -outputFile ./output/A.annotated.tsv -svtBEDcol 4 -genomeBuild GRCh38 -breakpointProximity 60
rm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/B.formatted.sorted.bed $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/B.header.tsv


result=`$cut "./output/A.annotated.tsv" "AnnotSV_ID;B_annotations_BNDprox" | awk 'BEGIN{ORS=" "; OFS=" "} { print $1, $2 }'`
if [ "$result" != "AnnotSV_ID B_annotations_BNDprox 1_101_200_DEL_1  1_151_170_DUP_1 B_ann2 " ]
then
        echo "Error with the "-breakpointProximity" option"
        exit 1
fi



# Check that no column is shifted
for v in `$cut "./output/A.annotated.tsv" "ACMG_class" | sort -u`
do
        if ! exists_in_list "1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA" " " "$v"
        then
                echo "error1: some columns semms to be shifted"
                exit 1
        fi
done


echo "ok - Finished"




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FILE: tests/AnnotSV/test_39_breakpointProximity/input/A.bed
================================================
# chrom	start	end	svtype	tric
chr1	100	200	DEL	truc
chr1	150	170	DUP	trac


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FILE: tests/AnnotSV/test_39_breakpointProximity/input/B.bed
================================================
#chrom	start	end	B_annotations_BNDprox
chr1	50	80	B_ann1
chr1	180	220	B_ann2
chr1	250	300	B_ann3
chr1	250	350	B_ann4
chr1	301	400	B_ann5