SYMBOL INDEX (39 symbols across 3 files)

FILE: process_mimic.py
  function convert_to_icd9 (line 18) | def convert_to_icd9(dxStr):
  function convert_to_3digit_icd9 (line 26) | def convert_to_3digit_icd9(dxStr):

FILE: retain.py
  function unzip (line 22) | def unzip(zipped):
  function numpy_floatX (line 28) | def numpy_floatX(data):
  function get_random_weight (line 31) | def get_random_weight(dim1, dim2, left=-0.1, right=0.1):
  function load_embedding (line 34) | def load_embedding(infile):
  function init_params (line 38) | def init_params(options):
  function load_params (line 76) | def load_params(options):
  function init_tparams (line 79) | def init_tparams(params, options):
  function dropout_layer (line 86) | def dropout_layer(state_before, use_noise, trng, keep_prob=0.5):
  function _slice (line 93) | def _slice(_x, n, dim):
  function gru_layer (line 98) | def gru_layer(tparams, emb, name, hiddenDimSize):
  function build_model (line 116) | def build_model(tparams, options, W_emb=None):
  function adadelta (line 175) | def adadelta(tparams, grads, x, y, lengths, cost, options, t=None):
  function adam (line 196) | def adam(cost, tparams, lr=0.0002, b1=0.1, b2=0.001, e=1e-8):
  function padMatrixWithTime (line 217) | def padMatrixWithTime(seqs, times, options):
  function padMatrixWithoutTime (line 233) | def padMatrixWithoutTime(seqs, options):
  function load_data_simple (line 245) | def load_data_simple(seqFile, labelFile, timeFile=''):
  function load_data (line 303) | def load_data(seqFile, labelFile, timeFile):
  function calculate_auc (line 345) | def calculate_auc(test_model, dataset, options):
  function calculate_cost (line 365) | def calculate_cost(test_model, dataset, options):
  function print2file (line 388) | def print2file(buf, outFile):
  function train_RETAIN (line 393) | def train_RETAIN(
  function parse_arguments (line 539) | def parse_arguments(parser):

FILE: test_retain.py
  function sigmoid (line 16) | def sigmoid(x):
  function numpy_floatX (line 19) | def numpy_floatX(data):
  function load_embedding (line 22) | def load_embedding(infile):
  function load_params (line 26) | def load_params(options):
  function init_tparams (line 34) | def init_tparams(params, options):
  function _slice (line 40) | def _slice(_x, n, dim):
  function gru_layer (line 45) | def gru_layer(tparams, emb, name, hiddenDimSize):
  function build_model (line 63) | def build_model(tparams, options):
  function padMatrixWithTime (line 81) | def padMatrixWithTime(seqs, times, options):
  function padMatrixWithoutTime (line 97) | def padMatrixWithoutTime(seqs, options):
  function load_data_debug (line 109) | def load_data_debug(seqFile, labelFile, timeFile=''):
  function load_data (line 166) | def load_data(dataFile, labelFile, timeFile):
  function print2file (line 186) | def print2file(buf, outFile):
  function train_RETAIN (line 191) | def train_RETAIN(
  function parse_arguments (line 276) | def parse_arguments(parser):