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Repository: schizofreny/middle-out
Branch: master
Commit: 0bbe73b5375b
Files: 23
Total size: 10.9 MB
Directory structure:
gitextract_xmcwhvin/
├── .clang-format
├── .gitignore
├── LICENSE.md
├── Makefile
├── README.md
├── ansible-playbook.yaml
├── avx512.cpp
├── avx512.hpp
├── data/
│ ├── README.md
│ ├── ibm.data
│ ├── redis_memory.data
│ ├── usages.data
│ ├── used.data
│ └── writes.data
├── example/
│ ├── Makefile
│ └── example.cpp
├── gbench/
│ └── perf.cpp
├── gtest/
│ └── test.cpp
├── helpers.hpp
├── middleout.cpp
├── middleout.hpp
├── scalar.cpp
└── scalar.hpp
================================================
FILE CONTENTS
================================================
================================================
FILE: .clang-format
================================================
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================================================
FILE: .gitignore
================================================
# Prerequisites
*.d
# Compiled Object files
*.slo
*.lo
*.o
*.obj
# Precompiled Headers
*.gch
*.pch
# Compiled Dynamic libraries
*.so
*.dylib
*.dll
# Fortran module files
*.mod
*.smod
# Compiled Static libraries
*.lai
*.la
*.a
*.lib
# Executables
*.exe
*.out
*.app
.vscode/
test
perf
dist/*
================================================
FILE: LICENSE.md
================================================
DO WHAT THE FUCK YOU WANT TO PUBLIC LICENSE
Version 2, December 2004
Copyright (C) 2004 Sam Hocevar <sam@hocevar.net>
Everyone is permitted to copy and distribute verbatim or modified
copies of this license document, and changing it is allowed as long
as the name is changed.
DO WHAT THE FUCK YOU WANT TO PUBLIC LICENSE
TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION
0. You just DO WHAT THE FUCK YOU WANT TO.
================================================
FILE: Makefile
================================================
CC = g++
###
# COMPILE AND RUN TESTS
###
GOOGLE_TEST_LIB = gtest
CC_TEST_FLAGS = -O2 -g -Wall -Wno-strict-aliasing -fsanitize=address -D_GLIBCXX_DEBUG_PEDANTIC
LD_TEST_FLAGS = -l $(GOOGLE_TEST_LIB) -l pthread -l gtest_main
TEST_OBJECTS = gtest/test.cpp scalar.cpp
TEST_TARGET = test
BUILD_DIR = dist
test:
$(CC) -o $(TEST_TARGET) $(TEST_OBJECTS) $(CC_TEST_FLAGS) $(LD_TEST_FLAGS) \
&& ./$(TEST_TARGET)
test-avx512:
$(CC) -o $(TEST_TARGET) $(TEST_OBJECTS) avx512.cpp $(CC_TEST_FLAGS) \
-march=skylake-avx512 $(LD_TEST_FLAGS) -D USE_AVX512 && ./$(TEST_TARGET)
###
# COMPILE STATIC LIBS
###
CC_LIB_FLAGS = -c -O3 -s
lib:
mkdir -p $(BUILD_DIR)
$(CC) $(CC_LIB_FLAGS) middleout.cpp scalar.cpp helpers.hpp -march=native
ar -rcs libmiddleout.a middleout.o scalar.o helpers.hpp.gch
mv libmiddleout.a $(BUILD_DIR)/
cp middleout.hpp $(BUILD_DIR)/
lib-avx512:
mkdir -p $(BUILD_DIR)
$(CC) $(CC_LIB_FLAGS) middleout.cpp avx512.cpp helpers.hpp -march=skylake-avx512 -D USE_AVX512
ar -rcs libmiddleout-avx512.a middleout.o avx512.o helpers.hpp.gch
mv libmiddleout-$(BUILD_DIR).a $(BUILD_DIR)/
cp middleout.hpp $(BUILD_DIR)/
install-libs-example:
cp $(BUILD_DIR)/*.a example
cp middleout.hpp example/
clean-lib:
-rm libmiddleout.a
-rm libmiddleout-avx512.a
-rm $(BUILD_DIR)/*.a
###
# COMPILE AND RUN GOOGLE BENCHMARK TESTS
###
CC_GBENCH_FLAGS = -O3
LD_GBENCH_FLAGS = -l gtest -l benchmark -l pthread
GBENCH_OBJECTS = gbench/perf.cpp scalar.cpp
GBENCH_TARGET = perf
bench:
$(CC) -o $(GBENCH_TARGET) $(GBENCH_OBJECTS) $(CC_GBENCH_FLAGS) -march=native $(LD_GBENCH_FLAGS)
./$(GBENCH_TARGET)
bench-avx512:
$(CC) -o $(GBENCH_TARGET) $(GBENCH_OBJECTS) avx512.cpp $(CC_GBENCH_FLAGS) -march=skylake-avx512 $(LD_GBENCH_FLAGS) -D USE_AVX512
./$(GBENCH_TARGET)
#aliases for bench
perf:
make bench
perf-avx512:
make bench-avx512
clean:
-rm *.o
-rm *.a
-rm *.gch
-rm gtest/*.o
-rm gbench/*.o
-rm $(BUILD_DIR) -r
-rm $(TEST_TARGET)
-rm $(GBENCH_TARGET)
.PHONY: clean test test-avx512 lib lib-avx512 clean-lib bench bench-avx512 perf perf-avx512
================================================
FILE: README.md
================================================
# Middle-out Compression for Time-series Data
We all know, how the Middle-out compression works at the HBO show [1], but how do we actually apply this to the time-series data?
Take a look at the following schema. There is an input vector of a data. This vector is divided to Middle-out segments. For simplicity, in the image there are only four of a segments, but compression actually uses eight. This is because the AVX-512 vector instructions can process up to 8 doubles at once. If we used a single precision numbers, then we’d have 16 Middle-out segments and proceed 16 elements at a time.
The first elements of each segment (denoted by blue) are referencing values. These values are stored as-is in the front of a compressed data.
As long as we have multiple referencing points, we can compute diffs between the following values in parallel. That allows us to iterate through all Middle-out segments simultaneously, in the same block of the SIMD instructions. Within each iteration, the current values are XORed with the previous ones and the results of this operation are stored in one data block.
If there is a reminder of the division of the length of the input vector by the count of Middle-out blocks, values from that reminder are stored uncompressed at the end of compressed data.
Of course the uncompressed header and footer add some space overhead, but we assume that the overhead would be amortized among at least a few thousands values.
Each data block starts with a bit mask determining what values are the same as the previous ones. If the corresponding bit is set, then we know that the value didn’t change. If all of the bits are set, no further information is stored - all values are the same as the previous ones. In that case, we are able to store an unchanged value in just single bit.
Next, we store the right offsets (trailing zeros) rounded down to bytes. As long as we are addressing whole bytes, we need only 3 bits to store that offset. Only the offsets respective to the changed values are stored. Then the max length (within this block) of the non-zero XORed value is stored. This length holds bytes as well, and we know the max length could not be 0; that would mean all the values are the same as the previous ones and we wouldn't store this information at all. Hence we need to store only lengths from 1 to 8 that can be stored in 3 bits. We store length only once per block, because we assume that all compressed data would have, in general, the same characteristics, i.e. changing by approximately the same value. All these values encoded in 3 bits (offsets and length) are conjoined and an optional padding is inserted if needed to reach the byte boundary.
Lastly, the XORs parts are stored at the end of the the data block.
## Scalar vs AVX-512 Implementation
This repository contains two implementations. The first is scalar implementation targeting pre-AVX-512 CPUs. Second implmementation is written in AVX-512 intrinsics and offers great speed up over the scalar implementation. The vectorized implementation can be build with `make` targets suffixed `-avx512`.
## Target Platforms
Both implementations in this repo targetting x86 (little endian). Works with `g++` compiler version **7.2+** in the Unix ecosystem.
## Performance
Throughput is measured on a single core of Skylake-X Xeon running at 2.0 GHz.
Compress ratios on example datasets vary from 1.3 to 3.3.
| | Scalar | AVX-512 |
|------------|-----------------------|----------------|
| Compress | 0.7 - 1.7 GB/s | 2.3 - 2.5 GB/s |
| Decompress | 2.3 - 2.9 GB/s | 3.4 - 4.8 GB/s |
[More informations](https://medium.com/@vaclav.loffelmann/the-worlds-first-middle-out-compression-for-time-series-data-part-1-1e5ad5312757 "The World’s First Middle-Out Compression for Time-series Data — Part 1").
# Compile libs
```
make lib
```
or
```
make lib-avx512
```
### Compile and Run Tests
```
make test
```
or
```
make test-avx512
```
### Compile and Run Performance Tests
```
make perf
```
or
```
make perf-avx512
```
### Compile and Run Example
```
make lib ; make lib-avx512
make install-libs-example
cd example
make
```
### Example code
```c++
#include "middleout.hpp"
vector<double>& dataIn = ...data...;
size_t count = dataIn.size();
// COMPRESSION
vector<char> compressed(middleout::maxCompressedSize(count));
size_t compressedLength = middleout::compress(dataIn, compressed);
// "compressed" contains compressed data between 0 and compressedLength th element
// DECOMPRESSION
vector<double> dataOut(count);
middleout::decompress(compressed, count, dataOut);
// "dataOut" contains decompressed data
```
## Dev dependencies
* [Google Test](https://github.com/google/googletest)
* [Google Benchmark](https://github.com/google/benchmark)
### Debian/Ubuntu
install gtest
```
apt install libgtest-dev build-essential cmake
cd /usr/src/gtest
cmake .
make -j4
cp *.a /usr/lib
```
install google benchmark
```
cd /usr/lib
git clone https://github.com/google/benchmark.git
cd benchmark
cmake . -DCMAKE_BUILD_TYPE=Release
make -j4
make install
```
## License
WTFPL version 2
## References
[1] https://vimeo.com/97107551
================================================
FILE: ansible-playbook.yaml
================================================
---
- hosts: middleout
become: yes
become_user: root
tasks:
- name: install required sw
apt: name={{item}} state=installed
with_items:
- cmake
- build-essential
- name: apt install libgtest-dev source code
apt: name=libgtest-dev
- name: compile gtest
shell: |
cmake .
make -j2
cp *.a /usr/lib
args:
chdir: /usr/src/gtest
- name: install google benchmark
shell: |
git clone https://github.com/google/benchmark.git
cd benchmark
cmake . -DCMAKE_BUILD_TYPE=Release
make -j2
make install
args:
chdir: /usr/lib
================================================
FILE: avx512.cpp
================================================
/*
Copyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com
All rights reserved.
See LICENSE.md file
*/
#include "avx512.hpp"
#include "helpers.hpp"
#include <algorithm>
#include <cstdint>
#include <vector>
#include <immintrin.h>
#include <memory>
namespace middleout {
template class Avx52<double>;
template class Avx52<int64_t>;
template class Avx52<uint64_t>;
template <typename T>
Avx52<T>::Avx52() {}
template <typename T>
std::unique_ptr<std::vector<char>> Avx52<T>::compressSimple(std::vector<T>& data) {
std::unique_ptr<std::vector<char>> compressed(
new std::vector<char>(Avx52<T>::maxCompressedSize(data.size())));
size_t size = Avx52<T>::compress(data, *compressed);
compressed->resize(size);
compressed->shrink_to_fit();
return compressed;
}
/**
* return length in bytes within left zeros and right zeros
*/
inline __m512i byteLength(__mmask8 mask, __m512i leftOffset, __m512i rightOffset) {
// return 8 - (leftOffset + rightOffset);
__m512i baseLength = _mm512_set1_epi64(8);
__m512i offsetsSum = _mm512_add_epi64(leftOffset, rightOffset);
return _mm512_maskz_sub_epi64(mask, baseLength, offsetsSum);
}
/**
* From number of bits, computes number of bytes (bytes). E.g. bits/8
*/
inline __m512i byteRound(__m512i x) {
// return x >> 3;
return _mm512_srli_epi64(x, 3);
}
/**
* Compresses offsets. Skip offsets by mask. Using 3bits per one offset
*/
inline int compressOffsets(__mmask8 notSame, __m512i offsets) {
// shift each offset to correct position
__m512i compressed = _mm512_maskz_compress_epi64(notSame, offsets);
// shift within one vector to final position
// skip first right 3 bits for maxLength
__m512i positioned =
_mm512_sllv_epi64(compressed, _mm512_setr_epi64(3, 6, 9, 12, 15, 18, 21, 24));
// combine positioned data with OR
return (int)_mm512_reduce_or_epi64(positioned);
}
/**
* Reverses bytes within elements of vector
*/
inline __m512i byte_reverse_within_epi64(__m512i a) {
// set *EPI16* positions for permutations
__m512i idx = _mm512_set_epi32(28 << 16 | 29, 30 << 16 | 31, //
24 << 16 | 25, 26 << 16 | 27, //
20 << 16 | 21, 22 << 16 | 23, //
16 << 16 | 17, 18 << 16 | 19, //
12 << 16 | 13, 14 << 16 | 15, //
8 << 16 | 9, 10 << 16 | 11, //
4 << 16 | 5, 6 << 16 | 7, //
0 << 16 | 1, 2 << 16 | 3);
// in g++ set_epi16 is not defined
// __m512i idx = _mm512_set_epi16(28, 29, 30, 31, //
// 24, 25, 26, 27, //
// 20, 21, 22, 23, //
// 16, 17, 18, 19, //
// 12, 13, 14, 15, //
// 8, 9, 10, 11, //
// 4, 5, 6, 7, //
// 0, 1, 2, 3);
// 2var because "1var" does not exists
// permute double bytes
__m512i permuted16 = _mm512_permutex2var_epi16(a, idx, a);
// swap bytes within epi16
__m512i right = _mm512_srli_epi16(permuted16, 8);
__m512i left = _mm512_slli_epi16(permuted16, 8);
// combine swaps
return _mm512_or_epi32(right, left);
}
/**
* Comress block of data
*/
template <typename T>
inline void compressBlock(std::vector<T>& data,
std::vector<char>& output,
size_t blockSize, // size of one middle-out block
size_t* outputIndex,
const size_t i, // position within middle-out block
const __m256i vindex, // indexes within middle-out block
__m512i* prev) {
__m512i curr = _mm512_i32gather_epi64(vindex, &data[i], 8);
__m512i xored = _mm512_xor_epi64(*prev, curr);
__mmask8 notSame = _mm512_cmp_epi64_mask(xored, _mm512_set1_epi64(0), _MM_CMPINT_NE);
// store "not same" metadata
output[(*outputIndex)++] = ~notSame;
// test if whole mask is zeros
if (notSame == 0) {
// skip if all values are the same as previous
return;
}
// computes 1s in mask - number of different values
int notSameCount = __builtin_popcount(notSame);
__m512i leadingZeros = _mm512_maskz_lzcnt_epi64(notSame, xored);
__m512i trailingZeros = _mm512_maskz_lzcnt_epi64(notSame, byte_reverse_within_epi64(xored));
__m512i leftOffsetBytes = byteRound(leadingZeros);
__m512i rightOffsetBytes = byteRound(trailingZeros);
__m512i lengthBytes = byteLength(notSame, leftOffsetBytes, rightOffsetBytes);
uint8_t maxLength = (uint8_t)_mm512_reduce_max_epi64(lengthBytes);
// right bytes offset * 8
__m512i shiftsBitsFromRight = _mm512_slli_epi64(rightOffsetBytes, 3);
// align non-zero xored part to right
__m512i shiftedXored = _mm512_srlv_epi64(xored, shiftsBitsFromRight);
int* outAsInts = reinterpret_cast<int*>(&output[*outputIndex]);
// store offsets and max length
// -1 becasue we need to store only values 1-8, so 3 bits are enought
outAsInts[0] = compressOffsets(notSame, rightOffsetBytes) | (maxLength - 1);
// +1 because first 3 bits are maxLength
*outputIndex += getBytesLengthOfOffsets(notSameCount + 1);
// maxLength * position
__m512i storeBase =
_mm512_mullo_epi64(_mm512_set1_epi64(maxLength), _mm512_setr_epi64(0, 1, 2, 3, 4, 5, 6, 7));
// compress within vector - store is done in strong order (documented behavior)
// compression is done by data overlapping
__m512i compressedXoredShifted = _mm512_maskz_compress_epi64(notSame, shiftedXored);
// store data
_mm512_i64scatter_epi64(&output[*outputIndex], storeBase, compressedXoredShifted, 1);
// // shift output data offsets
*outputIndex += notSameCount * maxLength;
// preserve previous data in vector register
*prev = curr;
}
/*
Middle-out compression
*/
template <typename T>
size_t Avx52<T>::compress(std::vector<T>& data, std::vector<char>& output) {
if (data.size() <= MIN_DATA_SIZE_COMPRESSION_TRESHOLD) {
// not enough data to compress
return doNotCompressTheData(data, output);
}
// skip first 8 init values
size_t outputIndex = sizeof(T) * VECTOR_SIZE;
// "middle-out" data block size
size_t blockSize = data.size() / VECTOR_SIZE;
// just copy init reference values
fillStart(data, output, blockSize);
__m256i vindex = _mm256_setr_epi32(0, 1, 2, 3, 4, 5, 6, 7);
vindex = _mm256_mullo_epi32(vindex, _mm256_set1_epi32(blockSize));
__m512i prev = _mm512_i32gather_epi64(vindex, &data[0], 8);
// main compression loop
for (size_t i = 1; i < blockSize; i += 1) {
compressBlock(data, output, blockSize, &outputIndex, i, vindex, &prev);
}
// write rest data without any compression
for (size_t i = blockSize * VECTOR_SIZE; i < data.size(); i++) {
T* outAsLongs = reinterpret_cast<T*>(&output[outputIndex]);
outAsLongs[0] = data[i];
outputIndex += sizeof(T);
}
// write compress algorithm version and datatype constant
output[outputIndex++] = 0x7E; //== 0b01111110
// to avoid access to invalid memory on decompression
return outputIndex + 6;
}
//
// DECOMPRESSION
//
template <typename T>
inline void decompressBlock(std::vector<char>& input,
size_t inputElements,
std::vector<T>& data,
size_t* inputIndex, // position within input data
const size_t blockSize, // size of middle-out block
const size_t i, // position within block
const __m256i vindex, // vector of output data indexes
__m512i* prev) {
// read mask of same values
uint8_t sameMask = input[(*inputIndex)++];
if (sameMask == 0b11111111) {
// all values are the same as previous ones
// simple store prev elements
_mm512_i32scatter_epi64(&data[i], vindex, *prev, 8);
return;
}
__mmask8 notSameMask = ~sameMask;
// read unaligned offsets, where offset = number of empty bytes from right in XORed value
uint32_t compresedOffsetsAndMaxLength = reinterpret_cast<uint32_t*>(&input[*inputIndex])[0];
// +1 because only 3 bits are stored and valid lengths are 1-8
uint8_t maxLength = (compresedOffsetsAndMaxLength & 0b111) + 1;
// count of 1s in mask
int sameCount = __builtin_popcount(sameMask);
int notSameCount = 8 - sameCount;
// +1 because first 3 bits are maxLength
*inputIndex += getBytesLengthOfOffsets(notSameCount + 1);
__m256i decompressOffsets =
_mm256_maskz_expand_epi32(notSameMask, _mm256_setr_epi32(0, 1, 2, 3, 4, 5, 6, 7));
__m256i readShifts = _mm256_mullo_epi32(_mm256_set1_epi32(maxLength), decompressOffsets);
__m512i toXor =
_mm512_mask_i32gather_epi64(*prev, notSameMask, readShifts, &input[*inputIndex], 1);
// expand offsets to each positon within offsets vector
__m512i offsets = _mm512_set1_epi64(compresedOffsetsAndMaxLength);
// zero other offsets
offsets = _mm512_and_epi64(offsets, _mm512_setr_epi64(0b111000, //
0b111000000, //
0b111000000000, //
0b111000000000000, //
0b111000000000000000, //
0b111000000000000000000, //
0b111000000000000000000000, //
0b111000000000000000000000000 //
));
// set offsets back to right in vector elemet
offsets = _mm512_srlv_epi64(offsets, _mm512_setr_epi64(3, 6, 9, 12, 15, 18, 21, 24));
// get offsets to positions corresponding with compressed values
offsets = _mm512_maskz_expand_epi64(notSameMask, offsets);
// offset *8
offsets = _mm512_slli_epi64(offsets, 3);
toXor = clearTopBits(toXor, (64 - 8 * maxLength));
// position to xor
toXor = _mm512_sllv_epi64(toXor, offsets);
__m512i xored = _mm512_mask_xor_epi64(*prev, notSameMask, *prev, toXor);
_mm512_i32scatter_epi64(&data[i], vindex, xored, 8);
*inputIndex += (sizeof(T) - sameCount) * maxLength;
*prev = xored;
}
template <typename T>
void Avx52<T>::decompress(std::vector<char>& input, size_t inputElements, std::vector<T>& data) {
// not enough data to compress
if (inputElements <= MIN_DATA_SIZE_COMPRESSION_TRESHOLD) {
return doNotDecompressTheData(input, inputElements, data);
}
//"middle-out" block size
size_t blockSize = inputElements / VECTOR_SIZE;
// copy first ref. values
for (size_t i = 0; i < VECTOR_SIZE; i++) {
data[blockSize * i] = (reinterpret_cast<T*>(input.data()))[i];
}
// skip first 8 init values
size_t inputIndex = sizeof(T) * VECTOR_SIZE;
// precompute vindex
__m256i vindex = _mm256_setr_epi32(0, 1, 2, 3, 4, 5, 6, 7);
vindex = _mm256_mullo_epi32(vindex, _mm256_set1_epi32(blockSize));
__m512i prev = _mm512_loadu_si512(&input[0]);
// main decompression loop
for (size_t i = 1; i < blockSize; i += 1) {
decompressBlock(input, inputElements, data, &inputIndex, blockSize, i, vindex, &prev);
}
// copy rest of data (uncompressed)
for (size_t i = blockSize * VECTOR_SIZE; i < inputElements; i++) {
data[i] = (reinterpret_cast<T*>(&input[inputIndex]))[0];
inputIndex += sizeof(T);
}
}
} // end namespace middleout
================================================
FILE: avx512.hpp
================================================
/*
Copyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com
All rights reserved.
See LICENSE.md file
*/
#include <vector>
#include <cstddef>
#include <type_traits>
#include <memory>
#ifndef AVX52_H
#define AVX52_H
namespace middleout {
template <typename T>
class Avx52 {
static_assert(sizeof(T) == 8, "Must use datatype with legth of 8 bytes.");
public:
Avx52();
static std::unique_ptr<std::vector<char>> compressSimple(std::vector<T>& data);
static size_t compress(std::vector<T>& data, std::vector<char>& output);
static void decompress(std::vector<char>& input, size_t itemsCount, std::vector<T>& data);
static size_t maxCompressedSize(size_t count) {
size_t blockCount = count / 8;
// 8*8 : init reference values
// 5*blockClount : max size of block headers
// 8*8*blockCount : max size of xored data: 8 bytes * 8 values
// 8*(count%8) : uncompressed rest of values
return 8 * 8 + blockCount * 5 + 8 * 8 * blockCount + 8 * (count % 8);
}
};
} // end namespace middleout
#endif /* AVX52_H */
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FILE: data/README.md
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File ibm.data contains minute stock data. Rest of files were generated by the https://github.com/influxdata/influxdb-comparisons/ tool.
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FILE: data/redis_memory.data
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8589934592
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FILE: data/usages.data
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FILE: data/used.data
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gitextract_xmcwhvin/ ├── .clang-format ├── .gitignore ├── LICENSE.md ├── Makefile ├── README.md ├── ansible-playbook.yaml ├── avx512.cpp ├── avx512.hpp ├── data/ │ ├── README.md │ ├── ibm.data │ ├── redis_memory.data │ ├── usages.data │ ├── used.data │ └── writes.data ├── example/ │ ├── Makefile │ └── example.cpp ├── gbench/ │ └── perf.cpp ├── gtest/ │ └── test.cpp ├── helpers.hpp ├── middleout.cpp ├── middleout.hpp ├── scalar.cpp └── scalar.hpp
SYMBOL INDEX (77 symbols across 10 files)
FILE: avx512.cpp
type middleout (line 18) | namespace middleout {
class Avx52<double> (line 20) | class Avx52<double>
class Avx52<int64_t> (line 21) | class Avx52<int64_t>
class Avx52<uint64_t> (line 22) | class Avx52<uint64_t>
function __m512i (line 40) | inline __m512i byteLength(__mmask8 mask, __m512i leftOffset, __m512i r...
function __m512i (line 49) | inline __m512i byteRound(__m512i x) {
function compressOffsets (line 57) | inline int compressOffsets(__mmask8 notSame, __m512i offsets) {
function __m512i (line 71) | inline __m512i byte_reverse_within_epi64(__m512i a) {
function compressBlock (line 107) | inline void compressBlock(std::vector<T>& data,
function decompressBlock (line 218) | inline void decompressBlock(std::vector<char>& input,
FILE: avx512.hpp
type middleout (line 18) | namespace middleout {
class Avx52 (line 22) | class Avx52 {
method maxCompressedSize (line 34) | static size_t maxCompressedSize(size_t count) {
FILE: example/example.cpp
function compressionWrapper (line 59) | void compressionWrapper(std::vector<T>& dataToCompress, std::vector<char...
function decompressionWrapper (line 91) | void decompressionWrapper(std::vector<char>& compressedData,
function testSequence (line 155) | void testSequence(T from, T to) {
function testStockData (line 178) | void testStockData() {
function main (line 224) | int main(void) {
FILE: gbench/perf.cpp
function getCompressor (line 36) | auto getCompressor() {
function getDecompressor (line 41) | auto getDecompressor() {
function benchmarkCompress (line 119) | static void benchmarkCompress(benchmark::State& state, std::vector<T>& d...
function benchmarkDecompress (line 134) | static void benchmarkDecompress(benchmark::State& state, std::vector<T>&...
function BM_sequenceCompress (line 145) | static void BM_sequenceCompress(benchmark::State& state) {
function BM_sequenceDecompress (line 152) | static void BM_sequenceDecompress(benchmark::State& state) {
function BM_RandRepeatCompress (line 159) | static void BM_RandRepeatCompress(benchmark::State& state) {
function BM_RandRepeatDecompress (line 166) | static void BM_RandRepeatDecompress(benchmark::State& state) {
function BM_testRandomDistributionCompress (line 173) | static void BM_testRandomDistributionCompress(benchmark::State& state) {
function BM_testRandomDistributionDecompress (line 180) | static void BM_testRandomDistributionDecompress(benchmark::State& state) {
FILE: gtest/test.cpp
type middleout (line 27) | namespace middleout {
function checkFunctions (line 30) | void checkFunctions(vector<V>& dataIn, T& compress, U& decompress) {
function compressDecompressCheck (line 55) | void compressDecompressCheck(vector<T>& dataIn) {
function testSequence (line 76) | void testSequence(long from, long to) {
function testSequenceDecimal (line 99) | void testSequenceDecimal(double from, double to) {
function testRDRAndomDistribution (line 109) | void testRDRAndomDistribution(double from, double to) {
function TEST (line 126) | TEST(CompressionTest, exampleCompressRatioTest) {
function TEST (line 145) | TEST(CompressionTest, basicTest) {
function TEST (line 248) | TEST(CompressionTest, testSequences) {
function TEST (line 264) | TEST(CompressionTest, testDifferentInputDataLength) {
function TEST (line 270) | TEST(CompressionTest, testRandom) {
function TEST (line 282) | TEST(CompressionTest, testRDRandom) {
function TEST (line 290) | TEST(CompressionTest, testVarLength) {
function TEST (line 296) | TEST(CompressionTest, testSteps) {
function TEST (line 308) | TEST(CompressionTest, testAlteringSeq) {
function TEST (line 331) | TEST(CompressionTest, test50PercentMonotonic) {
function TEST (line 348) | TEST(CompressionTest, testVarSEqLength) {
function TEST (line 361) | TEST(CompressionTest, testConstantSequenceDiffLength) {
function TEST (line 373) | TEST(CompressionTest, testSimpleAPI) {
function TEST (line 400) | TEST(CompressionTest, testSignChangeAltering) {
function TEST (line 413) | TEST(CompressionTest, testSequencesDecimal) {
function TEST (line 428) | TEST(CompressionTest, testVersionByte) {
FILE: helpers.hpp
type middleout (line 19) | namespace middleout {
function floor8 (line 32) | inline int floor8(int x) {
function ceil8 (line 39) | inline int ceil8(int x) {
function clearTopBits (line 43) | inline uint64_t clearTopBits(uint64_t data, uint64_t bitsCount) {
function getBytesLengthOfOffsets (line 48) | inline int getBytesLengthOfOffsets(int offsetsCount) {
function __m512i (line 56) | inline __m512i clearTopBits(__m512i toClear, uint64_t bitsCount) {
function fillStart (line 66) | void fillStart(std::vector<T>& data, std::vector<char>& output, size_t...
function doNotCompressTheData (line 74) | size_t doNotCompressTheData(std::vector<T>& data, std::vector<char>& o...
function doNotDecompressTheData (line 83) | void doNotDecompressTheData(std::vector<char>& input, size_t inputElem...
FILE: middleout.cpp
type middleout (line 24) | namespace middleout {
function compressSimple (line 26) | std::unique_ptr<std::vector<char>> compressSimple(std::vector<int64_t>...
function compressSimple (line 30) | std::unique_ptr<std::vector<char>> compressSimple(std::vector<double>&...
function compress (line 34) | size_t compress(std::vector<int64_t>& data, std::vector<char>& output) {
function compress (line 38) | size_t compress(std::vector<double>& data, std::vector<char>& output) {
function decompress (line 42) | void decompress(std::vector<char>& input, size_t inputElements, std::v...
function decompress (line 46) | void decompress(std::vector<char>& input, size_t inputElements, std::v...
function maxCompressedSize (line 50) | size_t maxCompressedSize(size_t count) {
FILE: middleout.hpp
type middleout (line 19) | namespace middleout {
FILE: scalar.cpp
type middleout (line 17) | namespace middleout {
class Scalar<double> (line 19) | class Scalar<double>
class Scalar<int64_t> (line 20) | class Scalar<int64_t>
class Scalar<uint64_t> (line 21) | class Scalar<uint64_t>
function decompressValue (line 164) | inline void decompressValue(const size_t j,
function decompressBlock (line 232) | inline void decompressBlock(std::vector<char>& input,
FILE: scalar.hpp
type middleout (line 18) | namespace middleout {
class Scalar (line 22) | class Scalar {
method maxCompressedSize (line 34) | static size_t maxCompressedSize(size_t count) {
Condensed preview — 23 files, each showing path, character count, and a content snippet. Download the .json file or copy for the full structured content (566K chars).
[
{
"path": ".clang-format",
"chars": 1836,
"preview": "BasedOnStyle: Chromium\nAccessModifierOffset: -1\nAlignAfterOpenBracket: true\nAlignEscapedNewlinesLeft: true\nAlignOperands"
},
{
"path": ".gitignore",
"chars": 299,
"preview": "\n# Prerequisites\n*.d\n\n# Compiled Object files\n*.slo\n*.lo\n*.o\n*.obj\n\n# Precompiled Headers\n*.gch\n*.pch\n\n# Compiled Dynami"
},
{
"path": "LICENSE.md",
"chars": 473,
"preview": " DO WHAT THE FUCK YOU WANT TO PUBLIC LICENSE\n Version 2, December 2004\n\nCopyright (C) 2004 S"
},
{
"path": "Makefile",
"chars": 2064,
"preview": "CC = g++\n\n###\n#\tCOMPILE AND RUN TESTS\n###\nGOOGLE_TEST_LIB = gtest\nCC_TEST_FLAGS = -O2 -g -Wall -Wno-strict-aliasing -fsa"
},
{
"path": "README.md",
"chars": 5311,
"preview": "# Middle-out Compression for Time-series Data\n\nWe all know, how the Middle-out compression works at the HBO show [1], bu"
},
{
"path": "ansible-playbook.yaml",
"chars": 667,
"preview": "---\n- hosts: middleout\n become: yes\n become_user: root\n tasks:\n - name: install required sw\n apt: name={{item"
},
{
"path": "avx512.cpp",
"chars": 11542,
"preview": "/*\n\nCopyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com\nAll rights reserved.\n\nSee LICENSE.md file\n\n*/\n\n#include"
},
{
"path": "avx512.hpp",
"chars": 1052,
"preview": "/*\n\nCopyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com\nAll rights reserved.\n\nSee LICENSE.md file\n\n*/\n\n#include"
},
{
"path": "data/README.md",
"chars": 135,
"preview": "File ibm.data contains minute stock data. Rest of files were generated by the https://github.com/influxdata/influxdb-com"
},
{
"path": "data/redis_memory.data",
"chars": 95040,
"preview": "8589934592\n8589934592\n8589934592\n8589934592\n8589934644\n8589934640\n8589934642\n8589934643\n8589934693\n8589934691\n8589934692"
},
{
"path": "data/usages.data",
"chars": 42867,
"preview": "2.6224297271376256\n2.3404828688740125\n2.5107414655010292\n1.7600378709022286\n0.3675759079717178\n2.4649354384441082\n2.3126"
},
{
"path": "data/used.data",
"chars": 258912,
"preview": "549755813888\n50\n134217728\n1340687348\n15.6076549143957415\n8589934592\n8589934592\n8589934592\n8589934592\n0\n0\n0\n0\n54975581383"
},
{
"path": "data/writes.data",
"chars": 48209,
"preview": "0\n0\n0\n0\n52\n100\n6\n2\n102\n200\n12\n7\n152\n299\n16\n11\n203\n399\n23\n18\n252\n499\n29\n23\n303\n599\n34\n27\n354\n700\n40\n33\n405\n800\n45\n37\n455\n"
},
{
"path": "example/Makefile",
"chars": 358,
"preview": "CPP = g++\nCPP_ARGS = -O3 -march=native -o demo\nTARGET = example.cpp\n\nHAVE_AVX512 = $(shell grep avx512 /proc/cpuinfo)\n\n\n"
},
{
"path": "example/example.cpp",
"chars": 6771,
"preview": "/*\n\nCopyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com\nAll rights reserved.\n\nSee LICENSE.md file\n\n*/\n\n#include"
},
{
"path": "gbench/perf.cpp",
"chars": 9216,
"preview": "/*\n\nCopyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com\nAll rights reserved.\n\nSee LICENSE.md file\n\n*/\n\n#include"
},
{
"path": "gtest/test.cpp",
"chars": 12085,
"preview": "/*\n\nCopyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com\nAll rights reserved.\n\nSee LICENSE.md file\n\n*/\n\n#include"
},
{
"path": "helpers.hpp",
"chars": 2004,
"preview": "/*\n\nCopyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com\nAll rights reserved.\n\nSee LICENSE.md file\n\n*/\n\n#include"
},
{
"path": "middleout.cpp",
"chars": 1335,
"preview": "/*\n\nCopyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com\nAll rights reserved.\n\nSee LICENSE.md file\n\n*/\n\n#include"
},
{
"path": "middleout.hpp",
"chars": 855,
"preview": "/*\n\nCopyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com\nAll rights reserved.\n\nSee LICENSE.md file\n\n*/\n\n#include"
},
{
"path": "scalar.cpp",
"chars": 11549,
"preview": "/*\n\nCopyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com\nAll rights reserved.\n\nSee LICENSE.md file\n\n*/\n\n#include"
},
{
"path": "scalar.hpp",
"chars": 1061,
"preview": "/*\n\nCopyright (c) 2017, Schizofreny s.r.o - info@schizofreny.com\nAll rights reserved.\n\nSee LICENSE.md file\n\n*/\n\n#include"
}
]
// ... and 1 more files (download for full content)
About this extraction
This page contains the full source code of the schizofreny/middle-out GitHub repository, extracted and formatted as plain text for AI agents and large language models (LLMs). The extraction includes 23 files (10.9 MB), approximately 230.1k tokens, and a symbol index with 77 extracted functions, classes, methods, constants, and types. Use this with OpenClaw, Claude, ChatGPT, Cursor, Windsurf, or any other AI tool that accepts text input. You can copy the full output to your clipboard or download it as a .txt file.
Extracted by GitExtract — free GitHub repo to text converter for AI. Built by Nikandr Surkov.