SYMBOL INDEX (42 symbols across 30 files)

FILE: Scripts/run_ACTINN.py
  function run_ACTINN (line 7) | def run_ACTINN(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderP...

FILE: Scripts/run_Cell_BLAST.py
  function run_Cell_BLAST (line 16) | def run_Cell_BLAST(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOr...

FILE: Scripts/run_DigitalCellSorter.py
  function run_DigitalCellSorter (line 8) | def run_DigitalCellSorter(DataPath, LabelsPath, CV_RDataPath, GeneListPa...

FILE: Scripts/run_LAmbDA.py
  function run_LAmbDA (line 21) | def run_LAmbDA(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderP...
  function wt_cutoff (line 162) | def wt_cutoff(colnum,cutoff,Gtmp,gamma):
  function resample (line 166) | def resample(prc_cut,Y,Gtmp,train,gamma):
  function select_feats (line 186) | def select_feats(Xtmp,num_zero_prc_cut,var_prc_cut):
  function get_yn (line 197) | def get_yn(predict,ys,delta,tau,output_feats):
  function get_yi (line 218) | def get_yi(rowsums,G2,ys):
  function run_LAmbDA2 (line 224) | def run_LAmbDA2(gamma, delta, tau, prc_cut, bs_prc, num_trees, max_nodes):

FILE: Scripts/run_LDA.py
  function run_LDA (line 9) | def run_LDA(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPath...

FILE: Scripts/run_LDA_rejection.py
  function run_LDA_rejection (line 9) | def run_LDA_rejection(DataPath, LabelsPath, CV_RDataPath, OutputDir, Gen...

FILE: Scripts/run_NMC.py
  function run_NMC (line 9) | def run_NMC(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPath...

FILE: Scripts/run_RF.py
  function run_RF (line 9) | def run_RF(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPath ...

FILE: Scripts/run_SVM.py
  function run_SVM (line 9) | def run_SVM(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPath...

FILE: Scripts/run_SVM_rejection.py
  function run_SVM (line 10) | def run_SVM(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPath...

FILE: Scripts/run_kNN50.py
  function run_kNN50 (line 9) | def run_kNN50(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPa...

FILE: Scripts/run_kNN9.py
  function run_kNN9 (line 9) | def run_kNN9(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPat...

FILE: Scripts/run_moana.py
  function run_moana (line 9) | def run_moana(DataPath, LabelsPath, ClassifierPath, OutputDir, GeneOrder...

FILE: Scripts/run_scVI.py
  function run_scVI (line 10) | def run_scVI(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPat...

FILE: Snakemake/Scripts/run_ACTINN.py
  function run_ACTINN (line 7) | def run_ACTINN(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderP...

FILE: Snakemake/Scripts/run_Cell_BLAST.py
  function run_Cell_BLAST (line 18) | def run_Cell_BLAST(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOr...

FILE: Snakemake/Scripts/run_DigitalCellSorter.py
  function run_DigitalCellSorter (line 8) | def run_DigitalCellSorter(DataPath, LabelsPath, CV_RDataPath, GeneListPa...

FILE: Snakemake/Scripts/run_LAmbDA.py
  function run_LAmbDA (line 21) | def run_LAmbDA(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderP...
  function wt_cutoff (line 162) | def wt_cutoff(colnum,cutoff,Gtmp,gamma):
  function resample (line 166) | def resample(prc_cut,Y,Gtmp,train,gamma):
  function select_feats (line 186) | def select_feats(Xtmp,num_zero_prc_cut,var_prc_cut):
  function get_yn (line 197) | def get_yn(predict,ys,delta,tau,output_feats):
  function get_yi (line 218) | def get_yi(rowsums,G2,ys):
  function run_LAmbDA2 (line 224) | def run_LAmbDA2(gamma, delta, tau, prc_cut, bs_prc, num_trees, max_nodes):

FILE: Snakemake/Scripts/run_LDA.py
  function run_LDA (line 12) | def run_LDA(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPath...

FILE: Snakemake/Scripts/run_LDA_rejection.py
  function run_LDA_rejection (line 12) | def run_LDA_rejection(DataPath, LabelsPath, CV_RDataPath, OutputDir, Gen...

FILE: Snakemake/Scripts/run_NMC.py
  function run_NMC (line 12) | def run_NMC(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPath...

FILE: Snakemake/Scripts/run_RF.py
  function run_RF (line 12) | def run_RF(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPath ...

FILE: Snakemake/Scripts/run_SVM.py
  function run_SVM (line 12) | def run_SVM(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPath...

FILE: Snakemake/Scripts/run_SVM_rejection.py
  function run_SVM (line 13) | def run_SVM(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPath...

FILE: Snakemake/Scripts/run_kNN50.py
  function run_kNN50 (line 12) | def run_kNN50(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPa...

FILE: Snakemake/Scripts/run_kNN9.py
  function run_kNN9 (line 12) | def run_kNN9(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPat...

FILE: Snakemake/Scripts/run_moana.py
  function run_moana (line 9) | def run_moana(DataPath, LabelsPath, ClassifierPath, OutputDir, GeneOrder...

FILE: Snakemake/Scripts/run_scVI.py
  function run_scVI (line 13) | def run_scVI(DataPath, LabelsPath, CV_RDataPath, OutputDir, GeneOrderPat...

FILE: Snakemake/rank_gene_dropouts.py
  function rank_gene_dropouts (line 11) | def rank_gene_dropouts(DataPath, CV_RDataPath, OutputDir):

FILE: rank_gene_dropouts.py
  function rank_gene_dropouts (line 8) | def rank_gene_dropouts(DataPath, CV_RDataPath, OutputDir):