Full Code of tensorwerk/hangar-py for AI

gitextract_qj3h30ym/

├── .bumpversion.cfg
├── .coveragerc
├── .editorconfig
├── .gitattributes
├── .github/
│   ├── ISSUE_TEMPLATE/
│   │   ├── bug_report.md
│   │   ├── feature_request.md
│   │   └── questions_and_documentation.md
│   ├── PULL_REQUEST_TEMPLATE.md
│   └── workflows/
│       ├── asvbench.yml
│       ├── release.yml
│       ├── testsphinx.yml
│       └── testsuite.yml
├── .gitignore
├── .readthedocs.yml
├── AUTHORS.rst
├── CHANGELOG.rst
├── CODE_OF_CONDUCT.rst
├── CONTRIBUTING.rst
├── LICENSE
├── MANIFEST.in
├── README.rst
├── asv_bench/
│   ├── README.rst
│   ├── asv.conf.json
│   └── benchmarks/
│       ├── __init__.py
│       ├── backend_comparisons.py
│       ├── backends/
│       │   ├── __init__.py
│       │   ├── hdf5_00.py
│       │   ├── hdf5_01.py
│       │   └── numpy_10.py
│       ├── commit_and_checkout.py
│       └── package.py
├── codecov.yml
├── docs/
│   ├── Tutorial-001.ipynb
│   ├── Tutorial-002.ipynb
│   ├── Tutorial-003.ipynb
│   ├── Tutorial-Dataset.ipynb
│   ├── Tutorial-QuickStart.ipynb
│   ├── Tutorial-RealQuickStart.ipynb
│   ├── api.rst
│   ├── authors.rst
│   ├── backends/
│   │   ├── hdf5_00.rst
│   │   ├── hdf5_01.rst
│   │   ├── lmdb_30.rst
│   │   ├── numpy_10.rst
│   │   └── remote_50.rst
│   ├── backends.rst
│   ├── benchmarking.rst
│   ├── changelog.rst
│   ├── cli.rst
│   ├── codeofconduct.rst
│   ├── concepts.rst
│   ├── conf.py
│   ├── contributing.rst
│   ├── contributingindex.rst
│   ├── design.rst
│   ├── externals.rst
│   ├── faq.rst
│   ├── index.rst
│   ├── installation.rst
│   ├── noindexapi/
│   │   ├── apiinit.rst
│   │   └── apiremotefetchdata.rst
│   ├── quickstart.rst
│   ├── readme.rst
│   ├── requirements.txt
│   ├── requirements_rtd.txt
│   ├── spelling_wordlist.txt
│   └── tutorial.rst
├── hangar.yml
├── mypy.ini
├── scripts/
│   └── run_proto_codegen.py
├── setup.cfg
├── setup.py
├── src/
│   └── hangar/
│       ├── __init__.py
│       ├── __main__.py
│       ├── _version.py
│       ├── backends/
│       │   ├── __init__.py
│       │   ├── chunk.py
│       │   ├── hdf5_00.py
│       │   ├── hdf5_01.py
│       │   ├── lmdb_30.py
│       │   ├── lmdb_31.py
│       │   ├── numpy_10.py
│       │   ├── remote_50.py
│       │   ├── specparse.pyx
│       │   ├── specs.pxd
│       │   └── specs.pyx
│       ├── bulk_importer.py
│       ├── checkout.py
│       ├── cli/
│       │   ├── __init__.py
│       │   ├── cli.py
│       │   └── utils.py
│       ├── columns/
│       │   ├── __init__.py
│       │   ├── column.py
│       │   ├── common.py
│       │   ├── constructors.py
│       │   ├── introspection.py
│       │   ├── layout_flat.py
│       │   └── layout_nested.py
│       ├── constants.py
│       ├── context.py
│       ├── dataset/
│       │   ├── __init__.py
│       │   ├── common.py
│       │   ├── numpy_dset.py
│       │   ├── tensorflow_dset.py
│       │   └── torch_dset.py
│       ├── diagnostics/
│       │   ├── __init__.py
│       │   ├── ecosystem.py
│       │   ├── graphing.py
│       │   └── integrity.py
│       ├── diff.py
│       ├── external/
│       │   ├── __init__.py
│       │   ├── _external.py
│       │   ├── base_plugin.py
│       │   └── plugin_manager.py
│       ├── external_cpython.pxd
│       ├── merger.py
│       ├── mixins/
│       │   ├── __init__.py
│       │   ├── checkout_iteration.py
│       │   ├── datasetget.py
│       │   └── recorditer.py
│       ├── op_state.py
│       ├── optimized_utils.pxd
│       ├── optimized_utils.pyx
│       ├── records/
│       │   ├── __init__.py
│       │   ├── column_parsers.pyx
│       │   ├── commiting.py
│       │   ├── hashmachine.pyx
│       │   ├── hashs.py
│       │   ├── heads.py
│       │   ├── parsing.py
│       │   ├── queries.py
│       │   ├── recordstructs.pxd
│       │   ├── recordstructs.pyx
│       │   ├── summarize.py
│       │   └── vcompat.py
│       ├── remote/
│       │   ├── __init__.py
│       │   ├── chunks.py
│       │   ├── client.py
│       │   ├── config_server.ini
│       │   ├── content.py
│       │   ├── hangar_service.proto
│       │   ├── hangar_service_pb2.py
│       │   ├── hangar_service_pb2.pyi
│       │   ├── hangar_service_pb2_grpc.py
│       │   ├── header_manipulator_client_interceptor.py
│       │   ├── request_header_validator_interceptor.py
│       │   └── server.py
│       ├── remotes.py
│       ├── repository.py
│       ├── txnctx.py
│       ├── typesystem/
│       │   ├── __init__.py
│       │   ├── base.py
│       │   ├── descriptors.py
│       │   ├── ndarray.py
│       │   ├── pybytes.py
│       │   └── pystring.py
│       └── utils.py
├── tests/
│   ├── bulk_importer/
│   │   └── test_bulk_importer.py
│   ├── conftest.py
│   ├── ml_datasets/
│   │   └── test_dataset.py
│   ├── property_based/
│   │   ├── conftest.py
│   │   ├── test_pbt_column_flat.py
│   │   └── test_pbt_column_nested.py
│   ├── test_backend_hdf5_00_hdf5_01.py
│   ├── test_branching.py
│   ├── test_checkout.py
│   ├── test_checkout_arrayset_access.py
│   ├── test_cli.py
│   ├── test_column.py
│   ├── test_column_backends.py
│   ├── test_column_definition_permutations.py
│   ├── test_column_nested.py
│   ├── test_column_pickle.py
│   ├── test_commit_ref_verification.py
│   ├── test_context_management.py
│   ├── test_diff.py
│   ├── test_diff_staged_summary.py
│   ├── test_initiate.py
│   ├── test_merging.py
│   ├── test_optimized_utils.py
│   ├── test_remote_serialize.py
│   ├── test_remotes.py
│   ├── test_repo_integrity_verification.py
│   ├── test_utils.py
│   ├── test_version.py
│   ├── test_visualizations.py
│   └── typesystem/
│       ├── test_ndarray_typesysem.py
│       ├── test_pybytes_typesystem.py
│       └── test_pystr_typesystem.py
└── tox.ini

SYMBOL INDEX (2012 symbols across 98 files)

FILE: asv_bench/benchmarks/backend_comparisons.py
  class _WriterSuite (line 14) | class _WriterSuite:
    method setup (line 24) | def setup(self, backend):
    method teardown (line 66) | def teardown(self, backend):
    method write (line 71) | def write(self, backend):
  class Write_50by50by20_300_samples (line 84) | class Write_50by50by20_300_samples(_WriterSuite):
  class _ReaderSuite (line 93) | class _ReaderSuite:
    method setup_cache (line 104) | def setup_cache(self):
    method setup (line 159) | def setup(self, backend):
    method teardown (line 170) | def teardown(self, backend):
    method read (line 174) | def read(self, backend):
  class Read_50by50by10_3000_samples (line 180) | class Read_50by50by10_3000_samples(_ReaderSuite):

FILE: asv_bench/benchmarks/backends/hdf5_00.py
  class _WriterSuite_HDF5_00 (line 10) | class _WriterSuite_HDF5_00:
    method setup (line 18) | def setup(self):
    method teardown (line 63) | def teardown(self):
    method read (line 68) | def read(self):
    method write (line 73) | def write(self):
    method size (line 82) | def size(self):
  class Write_50by50by10_1_samples (line 86) | class Write_50by50by10_1_samples(_WriterSuite_HDF5_00):
  class Write_50by50by10_100_samples (line 94) | class Write_50by50by10_100_samples(_WriterSuite_HDF5_00):
  class Read_50by50by10_1_samples (line 104) | class Read_50by50by10_1_samples(_WriterSuite_HDF5_00):
  class Read_50by50by10_100_samples (line 111) | class Read_50by50by10_100_samples(_WriterSuite_HDF5_00):
  class Read_50by50by10_300_samples (line 118) | class Read_50by50by10_300_samples(_WriterSuite_HDF5_00):

FILE: asv_bench/benchmarks/backends/hdf5_01.py
  class _WriterSuite_HDF5_01 (line 10) | class _WriterSuite_HDF5_01:
    method setup (line 18) | def setup(self):
    method teardown (line 66) | def teardown(self):
    method read (line 71) | def read(self):
    method write (line 76) | def write(self):
    method size (line 85) | def size(self):
  class Write_50by50by10_1_samples (line 89) | class Write_50by50by10_1_samples(_WriterSuite_HDF5_01):
  class Write_50by50by10_100_samples (line 97) | class Write_50by50by10_100_samples(_WriterSuite_HDF5_01):
  class Read_50by50by10_1_samples (line 107) | class Read_50by50by10_1_samples(_WriterSuite_HDF5_01):
  class Read_50by50by10_100_samples (line 114) | class Read_50by50by10_100_samples(_WriterSuite_HDF5_01):
  class Read_50by50by10_300_samples (line 121) | class Read_50by50by10_300_samples(_WriterSuite_HDF5_01):

FILE: asv_bench/benchmarks/backends/numpy_10.py
  class _WriterSuite_NUMPY_10 (line 10) | class _WriterSuite_NUMPY_10:
    method setup (line 18) | def setup(self):
    method teardown (line 63) | def teardown(self):
    method read (line 68) | def read(self):
    method write (line 73) | def write(self):
    method size (line 82) | def size(self):
  class Write_50by50by10_1_samples (line 86) | class Write_50by50by10_1_samples(_WriterSuite_NUMPY_10):
  class Write_50by50by10_100_samples (line 94) | class Write_50by50by10_100_samples(_WriterSuite_NUMPY_10):
  class Read_50by50by10_1_samples (line 104) | class Read_50by50by10_1_samples(_WriterSuite_NUMPY_10):
  class Read_50by50by10_100_samples (line 111) | class Read_50by50by10_100_samples(_WriterSuite_NUMPY_10):
  class Read_50by50by10_300_samples (line 118) | class Read_50by50by10_300_samples(_WriterSuite_NUMPY_10):

FILE: asv_bench/benchmarks/commit_and_checkout.py
  class MakeCommit (line 7) | class MakeCommit(object):
    method setup (line 16) | def setup(self, num_samples):
    method teardown (line 34) | def teardown(self, num_samples):
    method time_commit (line 39) | def time_commit(self, num_samples):
  class CheckoutCommit (line 43) | class CheckoutCommit(object):
    method setup (line 52) | def setup(self, num_samples):
    method teardown (line 73) | def teardown(self, num_samples):
    method time_checkout_read_only (line 81) | def time_checkout_read_only(self, num_samples):
    method time_checkout_write_enabled (line 84) | def time_checkout_write_enabled(self, num_samples):

FILE: asv_bench/benchmarks/package.py
  class TimeImport (line 3) | class TimeImport(object):
    method timeraw_import (line 8) | def timeraw_import(self):

FILE: setup.py
  class LazyCommandClass (line 35) | class LazyCommandClass(dict):
    method __contains__ (line 41) | def __contains__(self, key):
    method __setitem__ (line 44) | def __setitem__(self, key, value):
    method __getitem__ (line 49) | def __getitem__(self, key):
    method make_build_ext_cmd (line 59) | def make_build_ext_cmd(self):
    method make_bdist_wheel_cmd (line 79) | def make_bdist_wheel_cmd(self):
    method make_sdist_cmd (line 91) | def make_sdist_cmd(self):

FILE: src/hangar/_version.py
  class InfinityType (line 34) | class InfinityType(object):
    method __repr__ (line 37) | def __repr__(self) -> str:
    method __hash__ (line 40) | def __hash__(self) -> int:
    method __lt__ (line 43) | def __lt__(self, other: object) -> bool:
    method __le__ (line 46) | def __le__(self, other: object) -> bool:
    method __eq__ (line 49) | def __eq__(self, other: object) -> bool:
    method __ne__ (line 52) | def __ne__(self, other: object) -> bool:
    method __gt__ (line 55) | def __gt__(self, other: object) -> bool:
    method __ge__ (line 58) | def __ge__(self, other: object) -> bool:
    method __neg__ (line 61) | def __neg__(self) -> 'NegativeInfinityType':
  class NegativeInfinityType (line 68) | class NegativeInfinityType(object):
    method __repr__ (line 71) | def __repr__(self) -> str:
    method __hash__ (line 74) | def __hash__(self) -> int:
    method __lt__ (line 77) | def __lt__(self, other: object) -> bool:
    method __le__ (line 80) | def __le__(self, other: object) -> bool:
    method __eq__ (line 83) | def __eq__(self, other: object) -> bool:
    method __ne__ (line 86) | def __ne__(self, other: object) -> bool:
    method __gt__ (line 89) | def __gt__(self, other: object) -> bool:
    method __ge__ (line 92) | def __ge__(self, other: object) -> bool:
    method __neg__ (line 95) | def __neg__(self) -> InfinityType:
  function parse (line 127) | def parse(version: str) -> Union['Version']:
  class InvalidVersion (line 135) | class InvalidVersion(ValueError):
  class _BaseVersion (line 142) | class _BaseVersion(object):
    method __init__ (line 146) | def __init__(self):
    method __hash__ (line 149) | def __hash__(self) -> int:
    method __lt__ (line 152) | def __lt__(self, other: '_BaseVersion') -> bool:
    method __le__ (line 155) | def __le__(self, other: '_BaseVersion') -> bool:
    method __eq__ (line 158) | def __eq__(self, other: object) -> bool:
    method __ge__ (line 161) | def __ge__(self, other: '_BaseVersion') -> bool:
    method __gt__ (line 164) | def __gt__(self, other: '_BaseVersion') -> bool:
    method __ne__ (line 167) | def __ne__(self, other: object) -> bool:
    method _compare (line 170) | def _compare(self, other: object, method: 'VersionComparisonMethod'
  class Version (line 213) | class Version(_BaseVersion):  # lgtm [py/missing-equals]
    method __init__ (line 217) | def __init__(self, version: str) -> None:
    method __repr__ (line 247) | def __repr__(self) -> str:
    method __str__ (line 250) | def __str__(self) -> str:
    method epoch (line 279) | def epoch(self) -> int:
    method release (line 284) | def release(self) -> Tuple[int, ...]:
    method pre (line 289) | def pre(self) -> Optional[Tuple[str, int]]:
    method post (line 294) | def post(self) -> Optional[Tuple[str, int]]:
    method dev (line 298) | def dev(self) -> Optional[Tuple[str, int]]:
    method local (line 302) | def local(self) -> Optional[str]:
    method public (line 309) | def public(self) -> str:
    method base_version (line 313) | def base_version(self) -> str:
    method is_prerelease (line 326) | def is_prerelease(self) -> bool:
    method is_postrelease (line 330) | def is_postrelease(self) -> bool:
    method is_devrelease (line 334) | def is_devrelease(self) -> bool:
    method major (line 338) | def major(self) -> int:
    method minor (line 342) | def minor(self) -> int:
    method micro (line 346) | def micro(self) -> int:
  function _parse_letter_version (line 350) | def _parse_letter_version(
  function _parse_local_version (line 390) | def _parse_local_version(local: str) -> Optional['LocalType']:
  function _cmpkey (line 402) | def _cmpkey(

FILE: src/hangar/backends/chunk.py
  function _csformula (line 21) | def _csformula(expected_mb):
  function _limit_es (line 31) | def _limit_es(expected_mb):
  function _calc_chunksize (line 41) | def _calc_chunksize(expected_mb):
  function _rowsize (line 63) | def _rowsize(shape, maindim, itemsize):
  function calc_chunkshape (line 90) | def calc_chunkshape(shape, expectedrows, itemsize, maindim):

FILE: src/hangar/backends/hdf5_00.py
  function hdf5_00_encode (line 212) | def hdf5_00_encode(uid: str, cksum: str, dset: int, dset_idx: int, shape...
  class BloscCompressionOptions (line 248) | class BloscCompressionOptions(Descriptor):
  class GzipCompressionOptions (line 256) | class GzipCompressionOptions(Descriptor):
  class LzfCompressionOptions (line 264) | class LzfCompressionOptions(Descriptor):
  class AllowedDtypes (line 271) | class AllowedDtypes(Descriptor):
  class HDF5_00_Options (line 279) | class HDF5_00_Options(metaclass=checkedmeta):
    method __init__ (line 287) | def __init__(self, backend_options, dtype, shape, *args, **kwargs):
    method _verify_data_nbytes_larger_than_clib_min (line 303) | def _verify_data_nbytes_larger_than_clib_min(self):
    method default_options (line 319) | def default_options(self):
    method backend_options (line 329) | def backend_options(self):
    method init_requires (line 333) | def init_requires(self):
  class HDF5_00_FileHandles (line 340) | class HDF5_00_FileHandles(object):
    method __init__ (line 348) | def __init__(self, repo_path: Path, schema_shape: tuple, schema_dtype:...
    method __enter__ (line 373) | def __enter__(self):
    method __exit__ (line 376) | def __exit__(self, *exc):
    method __getstate__ (line 383) | def __getstate__(self) -> dict:
    method __setstate__ (line 395) | def __setstate__(self, state: dict) -> None:  # pragma: no cover
    method backend_opts (line 407) | def backend_opts(self):
    method _backend_opts_set (line 411) | def _backend_opts_set(self, val):
    method backend_opts (line 418) | def backend_opts(self, value):
    method open (line 433) | def open(self, mode: str, *, remote_operation: bool = False):
    method close (line 466) | def close(self):
    method delete_in_process_data (line 499) | def delete_in_process_data(repo_path: Path, *, remote_operation=False)...
    method _dataset_opts (line 526) | def _dataset_opts(complib: str, complevel: int, shuffle: Union[bool, s...
    method _chunk_opts (line 596) | def _chunk_opts(sample_array: np.ndarray, max_chunk_nbytes: int) -> Tu...
    method _create_schema (line 626) | def _create_schema(self, *, remote_operation: bool = False):
    method read_data (line 732) | def read_data(self, hashVal: HDF5_00_DataHashSpec) -> np.ndarray:
    method write_data (line 803) | def write_data(self, array: np.ndarray, *, remote_operation: bool = Fa...

FILE: src/hangar/backends/hdf5_01.py
  function hdf5_01_encode (line 250) | def hdf5_01_encode(uid: str, cksum: str, dset: int, dset_idx: int,
  class BloscCompressionOptions (line 287) | class BloscCompressionOptions(Descriptor):
  class GzipCompressionOptions (line 295) | class GzipCompressionOptions(Descriptor):
  class LzfCompressionOptions (line 303) | class LzfCompressionOptions(Descriptor):
  class AllowedDtypes (line 310) | class AllowedDtypes(Descriptor):
  class HDF5_01_Options (line 316) | class HDF5_01_Options(metaclass=checkedmeta):
    method __init__ (line 324) | def __init__(self, backend_options, dtype, shape, *args, **kwargs):
    method _verify_data_nbytes_larger_than_clib_min (line 340) | def _verify_data_nbytes_larger_than_clib_min(self):
    method default_options (line 356) | def default_options(self):
    method backend_options (line 366) | def backend_options(self):
    method init_requires (line 370) | def init_requires(self):
  class HDF5_01_FileHandles (line 377) | class HDF5_01_FileHandles(object):
    method __init__ (line 385) | def __init__(self, repo_path: Path, schema_shape: tuple, schema_dtype:...
    method __enter__ (line 410) | def __enter__(self):
    method __exit__ (line 413) | def __exit__(self, *exc):
    method __getstate__ (line 420) | def __getstate__(self) -> dict:
    method __setstate__ (line 432) | def __setstate__(self, state: dict) -> None:  # pragma: no cover
    method backend_opts (line 444) | def backend_opts(self):
    method _backend_opts_set (line 448) | def _backend_opts_set(self, val):
    method backend_opts (line 455) | def backend_opts(self, value):
    method open (line 470) | def open(self, mode: str, *, remote_operation: bool = False):
    method close (line 503) | def close(self):
    method delete_in_process_data (line 536) | def delete_in_process_data(repo_path: Path, *, remote_operation=False)...
    method _dataset_opts (line 563) | def _dataset_opts(complib: str, complevel: int, shuffle: Union[bool, s...
    method _create_schema (line 632) | def _create_schema(self, *, remote_operation: bool = False):
    method read_data (line 743) | def read_data(self, hashVal: HDF5_01_DataHashSpec) -> np.ndarray:
    method write_data (line 810) | def write_data(self, array: np.ndarray, *, remote_operation: bool = Fa...

FILE: src/hangar/backends/lmdb_30.py
  function _lexicographic_keys (line 114) | def _lexicographic_keys():
  function lmdb_30_encode (line 131) | def lmdb_30_encode(uid: str, row_idx: int, checksum: str) -> bytes:
  class AllowedDtypes (line 137) | class AllowedDtypes(Descriptor):
  class LMDB_30_Options (line 141) | class LMDB_30_Options(metaclass=checkedmeta):
    method __init__ (line 145) | def __init__(self, backend_options, dtype, *args, **kwargs):
    method default_options (line 152) | def default_options(self):
    method backend_options (line 156) | def backend_options(self):
    method init_requires (line 160) | def init_requires(self):
  class LMDB_30_FileHandles (line 164) | class LMDB_30_FileHandles:
    method __init__ (line 166) | def __init__(self, repo_path: Path, *args, **kwargs):
    method __enter__ (line 185) | def __enter__(self):
    method __exit__ (line 189) | def __exit__(self, *exc):
    method __getstate__ (line 193) | def __getstate__(self) -> dict:
    method __setstate__ (line 203) | def __setstate__(self, state: dict) -> None:  # pragma: no cover
    method backend_opts (line 212) | def backend_opts(self):
    method _backend_opts_set (line 216) | def _backend_opts_set(self, val):
    method backend_opts (line 223) | def backend_opts(self, value):
    method open (line 238) | def open(self, mode: str, *, remote_operation: bool = False):
    method close (line 271) | def close(self):
    method delete_in_process_data (line 295) | def delete_in_process_data(repo_path: Path, *, remote_operation=False)...
    method _create_schema (line 322) | def _create_schema(self, *, remote_operation: bool = False):
    method read_data (line 334) | def read_data(self, hashVal: LMDB_30_DataHashSpec) -> str:
    method write_data (line 370) | def write_data(self, data: str, *, remote_operation: bool = False) -> ...

FILE: src/hangar/backends/lmdb_31.py
  function _lexicographic_keys (line 114) | def _lexicographic_keys():
  function lmdb_31_encode (line 131) | def lmdb_31_encode(uid: str, row_idx: int, checksum: str) -> bytes:
  class AllowedDtypes (line 137) | class AllowedDtypes(Descriptor):
  class LMDB_31_Options (line 141) | class LMDB_31_Options(metaclass=checkedmeta):
    method __init__ (line 145) | def __init__(self, backend_options, dtype, *args, **kwargs):
    method default_options (line 152) | def default_options(self):
    method backend_options (line 156) | def backend_options(self):
    method init_requires (line 160) | def init_requires(self):
  class LMDB_31_FileHandles (line 164) | class LMDB_31_FileHandles:
    method __init__ (line 166) | def __init__(self, repo_path: Path, *args, **kwargs):
    method __enter__ (line 185) | def __enter__(self):
    method __exit__ (line 189) | def __exit__(self, *exc):
    method __getstate__ (line 193) | def __getstate__(self) -> dict:
    method __setstate__ (line 203) | def __setstate__(self, state: dict) -> None:  # pragma: no cover
    method backend_opts (line 212) | def backend_opts(self):
    method _backend_opts_set (line 216) | def _backend_opts_set(self, val):
    method backend_opts (line 223) | def backend_opts(self, value):
    method open (line 238) | def open(self, mode: str, *, remote_operation: bool = False):
    method close (line 271) | def close(self):
    method delete_in_process_data (line 295) | def delete_in_process_data(repo_path: Path, *, remote_operation=False)...
    method _create_schema (line 322) | def _create_schema(self, *, remote_operation: bool = False):
    method read_data (line 334) | def read_data(self, hashVal: LMDB_31_DataHashSpec) -> str:
    method write_data (line 369) | def write_data(self, data: bytes, *, remote_operation: bool = False) -...

FILE: src/hangar/backends/numpy_10.py
  function numpy_10_encode (line 106) | def numpy_10_encode(uid: str, cksum: str, collection_idx: int, shape: tu...
  class AllowedDtypes (line 137) | class AllowedDtypes(Descriptor):
  class NUMPY_10_Options (line 143) | class NUMPY_10_Options(metaclass=checkedmeta):
    method __init__ (line 147) | def __init__(self, backend_options, dtype, *args, **kwargs):
    method default_options (line 155) | def default_options(self):
    method backend_options (line 159) | def backend_options(self):
    method init_requires (line 163) | def init_requires(self):
  class NUMPY_10_FileHandles (line 167) | class NUMPY_10_FileHandles(object):
    method __init__ (line 169) | def __init__(self, repo_path: Path, schema_shape: tuple, schema_dtype:...
    method __getstate__ (line 190) | def __getstate__(self) -> dict:
    method __setstate__ (line 200) | def __setstate__(self, state: dict) -> None:  # pragma: no cover
    method __enter__ (line 209) | def __enter__(self):
    method __exit__ (line 212) | def __exit__(self, *exc):
    method backend_opts (line 217) | def backend_opts(self):
    method _backend_opts_set (line 221) | def _backend_opts_set(self, val):
    method backend_opts (line 228) | def backend_opts(self, value):
    method open (line 243) | def open(self, mode: str, *, remote_operation: bool = False):
    method close (line 271) | def close(self, *args, **kwargs):
    method delete_in_process_data (line 286) | def delete_in_process_data(repo_path: Path, *, remote_operation: bool ...
    method _create_schema (line 312) | def _create_schema(self, *, remote_operation: bool = False):
    method read_data (line 336) | def read_data(self, hashVal: NUMPY_10_DataHashSpec) -> np.ndarray:
    method write_data (line 394) | def write_data(self, array: np.ndarray, *, remote_operation: bool = Fa...

FILE: src/hangar/backends/remote_50.py
  function remote_50_encode (line 70) | def remote_50_encode(schema_hash: str = '') -> bytes:
  class REMOTE_50_Options (line 84) | class REMOTE_50_Options(metaclass=checkedmeta):
    method __init__ (line 87) | def __init__(self, backend_options, *args, **kwargs):
    method default_options (line 93) | def default_options(self):
    method backend_options (line 97) | def backend_options(self):
    method init_requires (line 101) | def init_requires(self):
  class REMOTE_50_Handler (line 105) | class REMOTE_50_Handler(object):
    method __init__ (line 107) | def __init__(self, repo_path: Path, *args, **kwargs):
    method __enter__ (line 112) | def __enter__(self):
    method __exit__ (line 115) | def __exit__(self, *exc):
    method __getstate__ (line 119) | def __getstate__(self) -> dict:  # pragma: no cover
    method __setstate__ (line 126) | def __setstate__(self, state: dict) -> None:  # pragma: no cover
    method backend_opts (line 133) | def backend_opts(self):
    method _backend_opts_set (line 137) | def _backend_opts_set(self, val):
    method backend_opts (line 144) | def backend_opts(self, value):
    method open (line 159) | def open(self, mode, *args, **kwargs):
    method close (line 163) | def close(self, *args, **kwargs):
    method delete_in_process_data (line 167) | def delete_in_process_data(*args, **kwargs) -> None:
    method read_data (line 172) | def read_data(self, hashVal: REMOTE_50_DataHashSpec) -> None:
    method write_data (line 177) | def write_data(self, schema_hash: str, *args, **kwargs) -> bytes:

FILE: src/hangar/bulk_importer.py
  class UDF_Return (line 114) | class UDF_Return(NamedTuple):
    method __eq__ (line 130) | def __eq__(self, other):
  function run_bulk_import (line 147) | def run_bulk_import(
  class _ContentDescriptionPrep (line 401) | class _ContentDescriptionPrep(NamedTuple):
    method db_record_key (line 408) | def db_record_key(self):
    method db_record_val (line 417) | def db_record_val(self):
  class _Task (line 421) | class _Task(NamedTuple):
    method num_steps (line 426) | def num_steps(self):
  class _WrittenContentDescription (line 430) | class _WrittenContentDescription(NamedTuple):
  function _num_steps_in_task_list (line 444) | def _num_steps_in_task_list(task_list: List[_Task]) -> int:
  function _serialize_udf (line 449) | def _serialize_udf(udf: UDF_T) -> bytes:
  function _deserialize_udf (line 454) | def _deserialize_udf(raw: bytes) -> UDF_T:
  function _process_num_cpus (line 459) | def _process_num_cpus(ncpus: int) -> int:
  function _check_user_input_func (line 483) | def _check_user_input_func(
  class _MPQueue (line 562) | class _MPQueue(mpq.Queue):
    method __init__ (line 566) | def __init__(self, *args, **kwargs):
    method safe_get (line 570) | def safe_get(self, timeout=0.5):
    method safe_put (line 579) | def safe_put(self, item, timeout=0.5) -> bool:
    method drain (line 586) | def drain(self):
    method safe_close (line 592) | def safe_close(self) -> int:
  class _BatchProcessPrepare (line 599) | class _BatchProcessPrepare(mp.Process):
    method __init__ (line 601) | def __init__(
    method _setup (line 639) | def _setup(self):
    method _input_tasks (line 642) | def _input_tasks(self) -> Iterator[List[dict]]:
    method run (line 648) | def run(self):
  function _run_prepare_recipe (line 677) | def _run_prepare_recipe(
  class _BatchProcessWriter (line 743) | class _BatchProcessWriter(mp.Process):
    method __init__ (line 745) | def __init__(
    method _setup (line 785) | def _setup(self):
    method _input_tasks (line 802) | def _input_tasks(self) -> Iterator[List[_Task]]:
    method _enter_backends (line 809) | def _enter_backends(self):
    method run (line 818) | def run(self):
  function _run_write_recipe_data (line 846) | def _run_write_recipe_data(
  function _unify_recipe_contents (line 917) | def _unify_recipe_contents(recipe: List[Tuple[dict, List[_ContentDescrip...
  function _reduce_recipe_on_required_digests (line 936) | def _reduce_recipe_on_required_digests(recipe: List[Tuple[dict, List[_Co...
  function _write_digest_to_bespec_mapping (line 997) | def _write_digest_to_bespec_mapping(
  function _write_full_recipe_sample_key_to_digest_mapping (line 1021) | def _write_full_recipe_sample_key_to_digest_mapping(
  function _mock_hangar_directory_structure (line 1041) | def _mock_hangar_directory_structure(dir_name: str) -> Path:
  function _move_tmpdir_data_files_to_repodir (line 1063) | def _move_tmpdir_data_files_to_repodir(repodir: Path, tmpdir: Path):

FILE: src/hangar/checkout.py
  class ReaderCheckout (line 36) | class ReaderCheckout(GetMixin, CheckoutDictIteration):
    method __init__ (line 80) | def __init__(self,
    method _repr_pretty_ (line 123) | def _repr_pretty_(self, p, cycle):
    method __repr__ (line 133) | def __repr__(self):
    method __enter__ (line 142) | def __enter__(self):
    method __exit__ (line 151) | def __exit__(self, *exc):
    method _verify_alive (line 155) | def _verify_alive(self):
    method _is_conman (line 170) | def _is_conman(self) -> bool:
    method columns (line 175) | def columns(self) -> Columns:
    method diff (line 213) | def diff(self) -> ReaderUserDiff:
    method commit_hash (line 233) | def commit_hash(self) -> str:
    method log (line 248) | def log(self,
    method close (line 299) | def close(self) -> None:
  class WriterCheckout (line 321) | class WriterCheckout(GetMixin, CheckoutDictIteration):
    method __init__ (line 359) | def __init__(self,
    method _repr_pretty_ (line 407) | def _repr_pretty_(self, p, cycle):
    method __repr__ (line 417) | def __repr__(self):
    method __enter__ (line 428) | def __enter__(self):
    method __exit__ (line 437) | def __exit__(self, *exc):
    method _is_conman (line 442) | def _is_conman(self):
    method _verify_alive (line 446) | def _verify_alive(self):
    method _setup (line 476) | def _setup(self):
    method columns (line 533) | def columns(self) -> Columns:
    method diff (line 579) | def diff(self) -> WriterUserDiff:
    method branch_name (line 599) | def branch_name(self) -> str:
    method commit_hash (line 611) | def commit_hash(self) -> str:
    method log (line 624) | def log(self,
    method add_str_column (line 675) | def add_str_column(self,
    method add_bytes_column (line 756) | def add_bytes_column(self,
    method add_ndarray_column (line 837) | def add_ndarray_column(self,
    method _initialize_new_column (line 959) | def _initialize_new_column(self,
    method merge (line 1009) | def merge(self, message: str, dev_branch: str) -> str:
    method commit (line 1058) | def commit(self, commit_message: str) -> str:
    method reset_staging_area (line 1110) | def reset_staging_area(self, *, force=False) -> str:
    method close (line 1175) | def close(self) -> None:

FILE: src/hangar/cli/cli.py
  function main (line 34) | def main(ctx):  # pragma: no cover
  function init (line 48) | def init(repo: Repository, name, email, overwrite):
  function writer_lock_held (line 64) | def writer_lock_held(repo: Repository, force_release_):
  function checkout (line 87) | def checkout(repo: Repository, branchname):
  function commit (line 107) | def commit(repo: Repository, message):
  function column (line 152) | def column(ctx):  # pragma: no cover
  function create_column (line 170) | def create_column(repo: Repository, name, dtype, shape, variable_, subsa...
  function remove_column (line 237) | def remove_column(repo: Repository, name):
  function clone (line 266) | def clone(repo: Repository, remote, name, email, overwrite):
  function fetch_records (line 282) | def fetch_records(repo: Repository, remote, branch):
  function fetch_data (line 300) | def fetch_data(repo: Repository, remote, startpoint, column, all_):
  function push (line 333) | def push(repo: Repository, remote, branch):
  function remote (line 345) | def remote(ctx):  # pragma: no cover
  function list_remotes (line 353) | def list_remotes(repo: Repository):
  function add_remote (line 363) | def add_remote(repo: Repository, name, address):
  function remove_remote (line 375) | def remove_remote(repo: Repository, name):
  function diff (line 390) | def diff(repo: Repository, dev, master):
  function summary (line 419) | def summary(repo: Repository, startpoint):
  function log (line 441) | def log(repo: Repository, startpoint):
  function status (line 460) | def status(repo: Repository):
  function branch (line 477) | def branch(ctx):  # pragma: no cover
  function branch_list (line 485) | def branch_list(repo: Repository):
  function branch_create (line 497) | def branch_create(repo: Repository, name, startpoint):
  function branch_remove (line 533) | def branch_remove(repo: Repository, name, force):
  function server (line 558) | def server(overwrite, ip, port, timeout):
  function import_data (line 613) | def import_data(ctx, repo: Repository, column, path, branch, plugin, ove...
  function export_data (line 683) | def export_data(ctx, repo: Repository, column, outdir, startpoint, sampl...
  function view_data (line 742) | def view_data(ctx, repo: Repository, column, sample, startpoint, format_...
  function lmdb_record_details (line 785) | def lmdb_record_details(repo: Repository, a, b, r, d, s, z, limit):

FILE: src/hangar/cli/utils.py
  class StrOrIntType (line 4) | class StrOrIntType(click.ParamType):
    method convert (line 9) | def convert(self, value, param, ctx):
  function parse_custom_arguments (line 25) | def parse_custom_arguments(click_args: list) -> dict:

FILE: src/hangar/columns/column.py
  class Columns (line 33) | class Columns:
    method __init__ (line 43) | def __init__(self,
    method _open (line 90) | def _open(self):
    method _close (line 94) | def _close(self):
    method _destruct (line 98) | def _destruct(self):
    method __getattr__ (line 107) | def __getattr__(self, name):
    method _repr_pretty_ (line 123) | def _repr_pretty_(self, p, cycle):
    method __repr__ (line 133) | def __repr__(self):
    method _ipython_key_completions_ (line 140) | def _ipython_key_completions_(self):
    method __getitem__ (line 154) | def __getitem__(self, key: str) -> ModifierTypes:
    method __contains__ (line 174) | def __contains__(self, key: str) -> bool:
    method __len__ (line 190) | def __len__(self) -> int:
    method __iter__ (line 195) | def __iter__(self) -> Iterable[str]:
    method _is_conman (line 199) | def _is_conman(self):
    method _any_is_conman (line 202) | def _any_is_conman(self) -> bool:
    method __enter__ (line 213) | def __enter__(self):
    method __exit__ (line 221) | def __exit__(self, *exc):
    method iswriteable (line 226) | def iswriteable(self) -> bool:
    method contains_remote_references (line 232) | def contains_remote_references(self) -> Mapping[str, bool]:
    method remote_sample_keys (line 248) | def remote_sample_keys(self) -> Mapping[str, Iterable[Union[int, str]]]:
    method keys (line 262) | def keys(self) -> List[str]:
    method values (line 272) | def values(self) -> Iterable[ModifierTypes]:
    method items (line 285) | def items(self) -> Iterable[Tuple[str, ModifierTypes]]:
    method get (line 297) | def get(self, name: str) -> ModifierTypes:
    method __delitem__ (line 318) | def __delitem__(self, key: str) -> str:
    method delete (line 344) | def delete(self, column: str) -> str:
    method _from_staging_area (line 397) | def _from_staging_area(cls, repo_pth, hashenv, stageenv, stagehashenv):
    method _from_commit (line 458) | def _from_commit(cls, repo_pth, hashenv, cmtrefenv):

FILE: src/hangar/columns/common.py
  class ColumnTxn (line 9) | class ColumnTxn(object):
    method __init__ (line 23) | def __init__(self, dataenv, hashenv, stagehashenv):
    method _debug_ (line 35) | def _debug_(self):  # pragma: no cover
    method open_read (line 46) | def open_read(self):
    method close_read (line 53) | def close_read(self):
    method open_write (line 59) | def open_write(self):
    method close_write (line 67) | def close_write(self):
    method read (line 75) | def read(self):
    method write (line 87) | def write(self):
  function open_file_handles (line 99) | def open_file_handles(backends, path, mode, schema, *, remote_operation=...

FILE: src/hangar/columns/constructors.py
  function column_type_object_from_schema (line 40) | def column_type_object_from_schema(schema: dict):
  function _warn_remote (line 51) | def _warn_remote(aset_name):
  function _flat_load_sample_keys_and_specs (line 61) | def _flat_load_sample_keys_and_specs(column_name, txnctx):
  function generate_flat_column (line 92) | def generate_flat_column(txnctx, column_name, path, schema, mode):
  function _nested_load_sample_keys_and_specs (line 147) | def _nested_load_sample_keys_and_specs(column_name, txnctx):
  function generate_nested_column (line 179) | def generate_nested_column(txnctx, column_name, path, schema, mode):

FILE: src/hangar/columns/introspection.py
  function is_column (line 10) | def is_column(obj) -> bool:
  function is_writer_column (line 20) | def is_writer_column(obj) -> bool:

FILE: src/hangar/columns/layout_flat.py
  class FlatSampleReader (line 34) | class FlatSampleReader:
    method __init__ (line 63) | def __init__(self,
    method _debug_ (line 82) | def _debug_(self):  # pragma: no cover
    method __repr__ (line 94) | def __repr__(self):
    method _repr_pretty_ (line 103) | def _repr_pretty_(self, p, cycle):
    method _ipython_key_completions_ (line 116) | def _ipython_key_completions_(self):  # pragma: no cover
    method __getstate__ (line 131) | def __getstate__(self) -> dict:
    method __setstate__ (line 136) | def __setstate__(self, state: dict) -> None:
    method __enter__ (line 146) | def __enter__(self):
    method __exit__ (line 149) | def __exit__(self, *exc):
    method _destruct (line 152) | def _destruct(self):
    method __getattr__ (line 159) | def __getattr__(self, name):
    method _is_conman (line 174) | def _is_conman(self) -> bool:
    method __iter__ (line 177) | def __iter__(self) -> Iterable[KeyType]:
    method __len__ (line 187) | def __len__(self) -> int:
    method __contains__ (line 192) | def __contains__(self, key: KeyType) -> bool:
    method _open (line 197) | def _open(self):
    method _close (line 201) | def _close(self):
    method __getitem__ (line 205) | def __getitem__(self, key: KeyType):
    method get (line 228) | def get(self, key: KeyType, default=None):
    method column (line 252) | def column(self) -> str:
    method column_type (line 258) | def column_type(self):
    method column_layout (line 264) | def column_layout(self):
    method schema_type (line 270) | def schema_type(self):
    method dtype (line 276) | def dtype(self):
    method shape (line 282) | def shape(self):
    method backend (line 291) | def backend(self) -> str:
    method backend_options (line 297) | def backend_options(self):
    method iswriteable (line 303) | def iswriteable(self) -> bool:
    method contains_subsamples (line 309) | def contains_subsamples(self) -> bool:
    method contains_remote_references (line 315) | def contains_remote_references(self) -> bool:
    method remote_reference_keys (line 333) | def remote_reference_keys(self) -> Tuple[KeyType]:
    method _mode_local_aware_key_looper (line 345) | def _mode_local_aware_key_looper(self, local: bool) -> Iterable[KeyType]:
    method keys (line 371) | def keys(self, local: bool = False) -> Iterable[KeyType]:
    method values (line 387) | def values(self, local: bool = False) -> Iterable[Any]:
    method items (line 405) | def items(self, local: bool = False) -> Iterable[Tuple[KeyType, Any]]:
  class FlatSampleWriter (line 426) | class FlatSampleWriter(FlatSampleReader):
    method __init__ (line 431) | def __init__(self, aset_ctx, *args, **kwargs):
    method __enter__ (line 435) | def __enter__(self):
    method __exit__ (line 446) | def __exit__(self, *exc):
    method _set_arg_validate (line 450) | def _set_arg_validate(self, key, value):
    method _perform_set (line 473) | def _perform_set(self, key, value):
    method __setitem__ (line 527) | def __setitem__(self, key, value):
    method append (line 552) | def append(self, value) -> KeyType:
    method update (line 585) | def update(self, other=None, **kwargs):
    method __delitem__ (line 626) | def __delitem__(self, key: KeyType) -> None:
    method pop (line 656) | def pop(self, key: KeyType):
    method change_backend (line 678) | def change_backend(self, backend: str, backend_options: Optional[dict]...

FILE: src/hangar/columns/layout_nested.py
  class FlatSubsampleReader (line 37) | class FlatSubsampleReader(object):
    method __init__ (line 43) | def __init__(self,
    method _debug_ (line 59) | def _debug_(self):  # pragma: no cover
    method __repr__ (line 70) | def __repr__(self):
    method _repr_pretty_ (line 76) | def _repr_pretty_(self, p, cycle):
    method _ipython_key_completions_ (line 84) | def _ipython_key_completions_(self):
    method __enter__ (line 98) | def __enter__(self):
    method __exit__ (line 102) | def __exit__(self, *exc):
    method _destruct (line 105) | def _destruct(self):
    method __getattr__ (line 111) | def __getattr__(self, name):
    method __getstate__ (line 126) | def __getstate__(self) -> dict:
    method __setstate__ (line 131) | def __setstate__(self, state: dict) -> None:
    method __len__ (line 141) | def __len__(self) -> int:
    method __contains__ (line 144) | def __contains__(self, key: KeyType) -> bool:
    method __iter__ (line 147) | def __iter__(self) -> Iterable[KeyType]:
    method __getitem__ (line 150) | def __getitem__(self, key: SubsampleGetKeysType) -> Union[Any, Dict[Ke...
    method _enter_count (line 201) | def _enter_count(self):
    method _enter_count (line 205) | def _enter_count(self, value):
    method _is_conman (line 209) | def _is_conman(self):
    method sample (line 213) | def sample(self) -> KeyType:
    method column (line 219) | def column(self) -> str:
    method iswriteable (line 225) | def iswriteable(self) -> bool:
    method data (line 231) | def data(self) -> Dict[KeyType, Any]:
    method _mode_local_aware_key_looper (line 242) | def _mode_local_aware_key_looper(self, local: bool) -> Iterable[KeyType]:
    method contains_remote_references (line 269) | def contains_remote_references(self) -> bool:
    method remote_reference_keys (line 287) | def remote_reference_keys(self) -> Tuple[KeyType]:
    method keys (line 299) | def keys(self, local: bool = False) -> Iterable[KeyType]:
    method values (line 315) | def values(self, local: bool = False) -> Iterable[Any]:
    method items (line 333) | def items(self, local: bool = False) -> Iterable[Tuple[KeyType, Any]]:
    method get (line 351) | def get(self, key: KeyType, default=None):
  class FlatSubsampleWriter (line 378) | class FlatSubsampleWriter(FlatSubsampleReader):
    method __init__ (line 383) | def __init__(self,
    method __enter__ (line 394) | def __enter__(self):
    method __exit__ (line 407) | def __exit__(self, *exc):
    method _set_arg_validate (line 413) | def _set_arg_validate(self, key, value):
    method _perform_set (line 420) | def _perform_set(self, key, value):
    method __setitem__ (line 476) | def __setitem__(self, key, value):
    method append (line 498) | def append(self, value) -> KeyType:
    method update (line 533) | def update(self, other=None, **kwargs):
    method __delitem__ (line 573) | def __delitem__(self, key: KeyType):
    method pop (line 603) | def pop(self, key: KeyType):
  class NestedSampleReader (line 621) | class NestedSampleReader:
    method __init__ (line 627) | def __init__(self,
    method __repr__ (line 644) | def __repr__(self):
    method _repr_pretty_ (line 653) | def _repr_pretty_(self, p, cycle):
    method _ipython_key_completions_ (line 667) | def _ipython_key_completions_(self):
    method __enter__ (line 681) | def __enter__(self):
    method __exit__ (line 685) | def __exit__(self, *exc):
    method _destruct (line 688) | def _destruct(self):
    method __getattr__ (line 697) | def __getattr__(self, name):
    method __getstate__ (line 712) | def __getstate__(self) -> dict:
    method __setstate__ (line 717) | def __setstate__(self, state: dict) -> None:
    method __getitem__ (line 728) | def __getitem__(
    method __iter__ (line 754) | def __iter__(self) -> Iterable[KeyType]:
    method __len__ (line 764) | def __len__(self) -> int:
    method __contains__ (line 769) | def __contains__(self, key: KeyType) -> bool:
    method _open (line 774) | def _open(self):
    method _close (line 784) | def _close(self):
    method _enter_count (line 795) | def _enter_count(self):
    method _enter_count (line 799) | def _enter_count(self, value):
    method _is_conman (line 803) | def _is_conman(self):
    method column (line 807) | def column(self) -> str:
    method column_type (line 813) | def column_type(self):
    method column_layout (line 819) | def column_layout(self):
    method schema_type (line 825) | def schema_type(self):
    method dtype (line 831) | def dtype(self):
    method shape (line 837) | def shape(self):
    method backend (line 846) | def backend(self) -> str:
    method backend_options (line 852) | def backend_options(self):
    method iswriteable (line 858) | def iswriteable(self) -> bool:
    method _mode_local_aware_key_looper (line 863) | def _mode_local_aware_key_looper(self, local: bool) -> Iterable[KeyType]:
    method contains_remote_references (line 890) | def contains_remote_references(self) -> bool:
    method remote_reference_keys (line 908) | def remote_reference_keys(self) -> Tuple[KeyType]:
    method contains_subsamples (line 921) | def contains_subsamples(self) -> bool:
    method num_subsamples (line 927) | def num_subsamples(self) -> int:
    method keys (line 935) | def keys(self, local: bool = False) -> Iterable[KeyType]:
    method values (line 951) | def values(self, local: bool = False) -> Iterable[Any]:
    method items (line 969) | def items(self, local: bool = False) -> Iterable[Tuple[KeyType, Any]]:
    method get (line 987) | def get(
  class NestedSampleWriter (line 1015) | class NestedSampleWriter(NestedSampleReader):
    method __init__ (line 1020) | def __init__(self, aset_ctx=None, *args, **kwargs):
    method __enter__ (line 1025) | def __enter__(self):
    method __exit__ (line 1038) | def __exit__(self, *exc):
    method _set_arg_validate (line 1042) | def _set_arg_validate(self, sample_key, subsample_map):
    method _perform_set (line 1053) | def _perform_set(self, key, value) -> None:
    method __setitem__ (line 1072) | def __setitem__(self, key, value) -> None:
    method update (line 1086) | def update(self, other=None, **kwargs) -> None:
    method __delitem__ (line 1126) | def __delitem__(self, key: KeyType):
    method pop (line 1146) | def pop(self, key: KeyType) -> Dict[KeyType, Any]:
    method change_backend (line 1165) | def change_backend(self, backend: str, backend_options: Optional[dict]...

FILE: src/hangar/context.py
  class Environments (line 43) | class Environments(object):
    method __init__ (line 45) | def __init__(self, pth: Path):
    method repo_is_initialized (line 57) | def repo_is_initialized(self) -> bool:
    method _startup (line 68) | def _startup(self) -> bool:
    method init_repo (line 108) | def init_repo(self,
    method checkout_commit (line 164) | def checkout_commit(self, branch_name: str = '', commit: str = '') -> ...
    method _open_environments (line 213) | def _open_environments(self):
    method _close_environments (line 231) | def _close_environments(self):

FILE: src/hangar/dataset/__init__.py
  function make_numpy_dataset (line 13) | def make_numpy_dataset(
  function make_torch_dataset (line 90) | def make_torch_dataset(
  function make_tensorflow_dataset (line 149) | def make_tensorflow_dataset(

FILE: src/hangar/dataset/common.py
  class HangarDataset (line 13) | class HangarDataset:
    method __init__ (line 33) | def __init__(self,
    method columns (line 91) | def columns(self):
    method __len__ (line 94) | def __len__(self):
    method index_get (line 97) | def index_get(self, index: int):

FILE: src/hangar/dataset/numpy_dset.py
  function default_collate_fn (line 14) | def default_collate_fn(batch):
  class NumpyDataset (line 28) | class NumpyDataset:
    method __init__ (line 66) | def __init__(self, dataset: HangarDataset, batch_size: int, drop_last:...
    method dataset (line 84) | def dataset(self):
    method num_batches (line 88) | def num_batches(self):
    method batch_size (line 92) | def batch_size(self):
    method batch_size (line 96) | def batch_size(self, value: int):
    method shuffle (line 104) | def shuffle(self):
    method shuffle (line 108) | def shuffle(self, value: bool):
    method __len__ (line 113) | def __len__(self):
    method _batch (line 116) | def _batch(self, batch_size, drop_last=True) -> None:
    method __iter__ (line 138) | def __iter__(self):
  function _make_numpy_dataset (line 155) | def _make_numpy_dataset(columns: Sequence['Columns'],

FILE: src/hangar/dataset/tensorflow_dset.py
  function yield_data (line 24) | def yield_data(dataset: HangarDataset, indices: list,
  function _make_tensorflow_dataset (line 33) | def _make_tensorflow_dataset(columns: Sequence['Columns'],

FILE: src/hangar/dataset/torch_dset.py
  class TorchDataset (line 18) | class TorchDataset(torch.utils.data.Dataset):
    method __init__ (line 26) | def __init__(self, hangar_dataset: HangarDataset, as_dict: bool = False):
    method __len__ (line 31) | def __len__(self) -> int:
    method __getitem__ (line 34) | def __getitem__(self, index: int):
  function _make_torch_dataset (line 44) | def _make_torch_dataset(columns: Sequence['Columns'],

FILE: src/hangar/diagnostics/ecosystem.py
  function get_versions (line 19) | def get_versions() -> dict:
  function get_system_info (line 31) | def get_system_info() -> List[Tuple[str, str]]:
  function get_optional_info (line 70) | def get_optional_info() -> Dict[str, Union[str, bool]]:
  function get_package_info (line 103) | def get_package_info(pkgs):

FILE: src/hangar/diagnostics/graphing.py
  class Column (line 61) | class Column(object):  # pylint: disable=too-few-public-methods
    method __init__ (line 71) | def __init__(self, commit, color):
  class GraphState (line 76) | class GraphState(Enum):  # pylint: disable=too-few-public-methods
  class Graph (line 85) | class Graph(object):  # pragma: no cover
    method __init__ (line 164) | def __init__(self,
    method show_nodes (line 209) | def show_nodes(self, dag, spec, branch, start, order, stop='',
    method _write_column (line 269) | def _write_column(self, col, col_char):
    method _update_state (line 276) | def _update_state(self, state):
    method _interesting_parents (line 280) | def _interesting_parents(self):
    method _get_current_column_color (line 286) | def _get_current_column_color(self):
    method _increment_column_color (line 291) | def _increment_column_color(self):
    method _find_commit_color (line 295) | def _find_commit_color(self, commit):
    method _insert_into_new_columns (line 301) | def _insert_into_new_columns(self, commit, mapping_index):
    method _update_width (line 318) | def _update_width(self, is_commit_in_existing_columns):
    method _update_columns (line 343) | def _update_columns(self):
    method _update (line 416) | def _update(self, commit, parents):
    method _is_mapping_correct (line 452) | def _is_mapping_correct(self):
    method _pad_horizontally (line 467) | def _pad_horizontally(self, chars_written):
    method _output_padding_line (line 479) | def _output_padding_line(self):
    method _output_skip_line (line 488) | def _output_skip_line(self):
    method _output_pre_commit_line (line 499) | def _output_pre_commit_line(self):
    method _draw_octopus_merge (line 555) | def _draw_octopus_merge(self):
    method _output_commit_line (line 569) | def _output_commit_line(self):  # noqa: C901, E501 pylint: disable=too...
    method _find_new_column_by_commit (line 627) | def _find_new_column_by_commit(self, commit):
    method _output_post_merge_line (line 633) | def _output_post_merge_line(self):
    method _output_collapsing_line (line 679) | def _output_collapsing_line(self):  # noqa: C901, E501 pylint: disable...
    method _next_line (line 775) | def _next_line(self):  # pylint: disable=too-many-return-statements
    method _padding_line (line 797) | def _padding_line(self):
    method _is_commit_finished (line 827) | def _is_commit_finished(self):
    method _show_commit (line 830) | def _show_commit(self):
    method _show_padding (line 847) | def _show_padding(self):
    method _show_remainder (line 852) | def _show_remainder(self):

FILE: src/hangar/diagnostics/integrity.py
  function _verify_column_integrity (line 18) | def _verify_column_integrity(hashenv: lmdb.Environment, repo_path: Path):
  function _verify_schema_integrity (line 52) | def _verify_schema_integrity(hashenv: lmdb.Environment):
  function _verify_commit_tree_integrity (line 68) | def _verify_commit_tree_integrity(refenv: lmdb.Environment):
  function _verify_commit_ref_digests_exist (line 108) | def _verify_commit_ref_digests_exist(hashenv: lmdb.Environment, refenv: ...
  function _verify_branch_integrity (line 143) | def _verify_branch_integrity(branchenv: lmdb.Environment, refenv: lmdb.E...
  function run_verification (line 166) | def run_verification(branchenv: lmdb.Environment,

FILE: src/hangar/diff.py
  class HistoryDiffStruct (line 28) | class HistoryDiffStruct(NamedTuple):
  class Changes (line 35) | class Changes(NamedTuple):
  class DiffOutDB (line 40) | class DiffOutDB(NamedTuple):
  class DiffOut (line 46) | class DiffOut(NamedTuple):
  class Conflicts (line 55) | class Conflicts(NamedTuple):
  class DiffAndConflictsDB (line 78) | class DiffAndConflictsDB(NamedTuple):
  class DiffAndConflicts (line 83) | class DiffAndConflicts(NamedTuple):
  function diff_envs (line 91) | def diff_envs(base_env: lmdb.Environment, head_env: lmdb.Environment, ) ...
  function _raw_from_db_change (line 164) | def _raw_from_db_change(changes: Set[Tuple[bytes, bytes]]) -> Changes:
  function _all_raw_from_db_changes (line 200) | def _all_raw_from_db_changes(outDb: DiffAndConflictsDB) -> DiffAndConfli...
  function _symmetric_difference_keys (line 228) | def _symmetric_difference_keys(pair1: Set[Tuple[bytes, bytes]],
  function find_conflicts (line 259) | def find_conflicts(master_diff: DiffOutDB, dev_diff: DiffOutDB) -> Confl...
  class BaseUserDiff (line 292) | class BaseUserDiff(object):
    method __init__ (line 294) | def __init__(self, branchenv: lmdb.Environment, refenv: lmdb.Environme...
    method _determine_ancestors (line 299) | def _determine_ancestors(self, mHEAD: str, dHEAD: str) -> HistoryDiffS...
    method _diff3 (line 336) | def _diff3(a_env: lmdb.Environment,
    method _diff (line 362) | def _diff(a_env: lmdb.Environment, m_env: lmdb.Environment) -> DiffAnd...
  class ReaderUserDiff (line 390) | class ReaderUserDiff(BaseUserDiff):
    method __init__ (line 425) | def __init__(self, commit_hash, *args, **kwargs):
    method _run_diff (line 430) | def _run_diff(self, dev_commit_hash: str) -> DiffAndConflictsDB:
    method commit (line 454) | def commit(self, dev_commit_hash: str) -> DiffAndConflicts:
    method branch (line 481) | def branch(self, dev_branch: str) -> DiffAndConflicts:
  class WriterUserDiff (line 515) | class WriterUserDiff(BaseUserDiff):
    method __init__ (line 553) | def __init__(self, stageenv: lmdb.Environment, branch_name: str, *args...
    method _run_diff (line 559) | def _run_diff(self, dev_commit_hash: str) -> DiffAndConflictsDB:
    method commit (line 583) | def commit(self, dev_commit_hash: str) -> DiffAndConflicts:
    method branch (line 610) | def branch(self, dev_branch: str) -> DiffAndConflicts:
    method staged (line 640) | def staged(self) -> DiffAndConflicts:
    method status (line 655) | def status(self) -> str:

FILE: src/hangar/external/_external.py
  function load (line 26) | def load(fpath: str,
  function save (line 66) | def save(arr: np.ndarray, outdir: str, sample_det: str, extension: str,
  function show (line 111) | def show(arr: np.ndarray, plugin: str = None,
  function board_show (line 141) | def board_show(arr: np.ndarray, plugin: str = None,

FILE: src/hangar/external/base_plugin.py
  class BasePlugin (line 16) | class BasePlugin(object):
    method __init__ (line 30) | def __init__(self, provides, accepts):
    method provides (line 39) | def provides(self):
    method accepts (line 43) | def accepts(self):
    method load (line 46) | def load(self, fpath, *args, **kwargs):
    method save (line 79) | def save(self, arr, outdir, sample_detail, extension, *args, **kwargs):
    method show (line 111) | def show(self, arr, *args, **kwargs):
    method board_show (line 122) | def board_show(self, arr, *args, **kwargs):
    method sample_name (line 133) | def sample_name(fpath: os.PathLike) -> str:

FILE: src/hangar/external/plugin_manager.py
  class PluginManager (line 5) | class PluginManager(object):
    method __init__ (line 13) | def __init__(self):
    method reset_plugins (line 18) | def reset_plugins(self):
    method _clear_plugins (line 29) | def _clear_plugins(self):
    method _scan_plugins (line 37) | def _scan_plugins(self):
    method _read_defaults (line 47) | def _read_defaults(self):
    method get_plugin (line 58) | def get_plugin(self, method: str, plugin: str = None, extension: str =...

FILE: src/hangar/merger.py
  function select_merge_algorithm (line 36) | def select_merge_algorithm(message: str,
  function _fast_forward_merge (line 150) | def _fast_forward_merge(branchenv: lmdb.Environment,
  function _three_way_merge (line 205) | def _three_way_merge(message: str,

FILE: src/hangar/mixins/checkout_iteration.py
  class CheckoutDictIteration (line 3) | class CheckoutDictIteration:
    method __len__ (line 16) | def __len__(self):
    method __contains__ (line 22) | def __contains__(self, key):
    method __iter__ (line 28) | def __iter__(self):
    method keys (line 33) | def keys(self):
    method values (line 39) | def values(self):
    method items (line 45) | def items(self):

FILE: src/hangar/mixins/datasetget.py
  class GetMixin (line 6) | class GetMixin:
    method __getitem__ (line 13) | def __getitem__(self, index):
    method get (line 112) | def get(self, keys, default=None, except_missing=False):
    method _get_in (line 152) | def _get_in(self, keys, default=None, except_missing=False,

FILE: src/hangar/mixins/recorditer.py
  class CursorRangeIterator (line 5) | class CursorRangeIterator:
    method cursor_range_iterator (line 8) | def cursor_range_iterator(datatxn: lmdb.Transaction, startRangeKey: by...

FILE: src/hangar/op_state.py
  function writer_checkout_only (line 8) | def writer_checkout_only(wrapped, instance, args, kwargs) -> types.Metho...
  function reader_checkout_only (line 54) | def reader_checkout_only(wrapped, instance, args, kwargs) -> types.Metho...
  function tb_params_last_called (line 99) | def tb_params_last_called(tb: types.TracebackType) -> dict:
  function report_corruption_risk_on_parsing_error (line 130) | def report_corruption_risk_on_parsing_error(func):

FILE: src/hangar/records/commiting.py
  function expand_short_commit_digest (line 47) | def expand_short_commit_digest(refenv: lmdb.Environment, commit_hash: st...
  function check_commit_hash_in_history (line 91) | def check_commit_hash_in_history(refenv, commit_hash):
  function get_commit_spec (line 116) | def get_commit_spec(refenv, commit_hash):
  function get_commit_ancestors (line 150) | def get_commit_ancestors(refenv, commit_hash):
  function get_commit_ancestors_graph (line 186) | def get_commit_ancestors_graph(refenv, starting_commit):
  function get_commit_ref (line 248) | def get_commit_ref(refenv, commit_hash):
  function unpack_commit_ref (line 308) | def unpack_commit_ref(refenv, cmtrefenv, commit_hash):
  function tmp_cmt_env (line 343) | def tmp_cmt_env(refenv: lmdb.Environment, commit_hash: str):
  function _commit_ancestors (line 383) | def _commit_ancestors(branchenv: lmdb.Environment,
  function _commit_spec (line 429) | def _commit_spec(message: str, user: str, email: str) -> DigestAndBytes:
  function _commit_ref (line 457) | def _commit_ref(stageenv: lmdb.Environment) -> DigestAndBytes:
  function commit_records (line 482) | def commit_records(message, branchenv, stageenv, refenv, repo_path: Path,
  function replace_staging_area_with_commit (line 563) | def replace_staging_area_with_commit(refenv, stageenv, commit_hash):
  function replace_staging_area_with_refs (line 592) | def replace_staging_area_with_refs(stageenv, sorted_content):
  function move_process_data_to_store (line 628) | def move_process_data_to_store(repo_path: Path, *, remote_operation: boo...
  function list_all_commits (line 672) | def list_all_commits(refenv):
  function number_commits_recorded (line 700) | def number_commits_recorded(refenv) -> int:

FILE: src/hangar/records/hashs.py
  class HashQuery (line 20) | class HashQuery(CursorRangeIterator):
    method __init__ (line 36) | def __init__(self, hashenv: lmdb.Environment):
    method _traverse_all_hash_records (line 41) | def _traverse_all_hash_records(self, keys: bool = True, values: bool =...
    method _traverse_all_schema_records (line 64) | def _traverse_all_schema_records(self, keys: bool = True, values: bool...
    method list_all_hash_keys_raw (line 87) | def list_all_hash_keys_raw(self) -> List[str]:
    method gen_all_hash_keys_db (line 91) | def gen_all_hash_keys_db(self) -> Iterable[bytes]:
    method intersect_keys_db (line 94) | def intersect_keys_db(self, other: Set[bytes]):
    method list_all_schema_digests (line 119) | def list_all_schema_digests(self) -> List[str]:
    method gen_all_schema_keys_db (line 123) | def gen_all_schema_keys_db(self) -> Iterable[bytes]:
    method num_data_records (line 126) | def num_data_records(self) -> int:
    method num_schema_records (line 133) | def num_schema_records(self) -> int:
    method gen_all_data_digests_and_parsed_backend_specs (line 138) | def gen_all_data_digests_and_parsed_backend_specs(self):
    method gen_all_schema_digests_and_parsed_specs (line 144) | def gen_all_schema_digests_and_parsed_specs(self) -> Iterable[Tuple[st...
    method get_schema_digest_spec (line 150) | def get_schema_digest_spec(self, digest) -> dict:
  function backends_remove_in_process_data (line 162) | def backends_remove_in_process_data(repo_path: Path, *, remote_operation...
  function clear_stage_hash_records (line 183) | def clear_stage_hash_records(stagehashenv):
  function remove_stage_hash_records_from_hashenv (line 203) | def remove_stage_hash_records_from_hashenv(hashenv, stagehashenv):

FILE: src/hangar/records/heads.py
  class BranchHead (line 28) | class BranchHead(NamedTuple):
  function writer_lock_held (line 43) | def writer_lock_held(branchenv):
  function acquire_writer_lock (line 73) | def acquire_writer_lock(branchenv, writer_uuid):
  function release_writer_lock (line 130) | def release_writer_lock(branchenv, writer_uuid):
  function create_branch (line 194) | def create_branch(branchenv, name, base_commit) -> BranchHead:
  function remove_branch (line 245) | def remove_branch(branchenv: lmdb.Environment,
  function get_staging_branch_head (line 337) | def get_staging_branch_head(branchenv):
  function set_staging_branch_head (line 360) | def set_staging_branch_head(branchenv, branch_name):
  function get_branch_head_commit (line 407) | def get_branch_head_commit(branchenv, branch_name):
  function set_branch_head_commit (line 441) | def set_branch_head_commit(branchenv, branch_name, commit_hash):
  function get_branch_names (line 484) | def get_branch_names(branchenv):
  function commit_hash_to_branch_name_map (line 519) | def commit_hash_to_branch_name_map(branchenv: lmdb.Environment) -> dict:
  function add_remote (line 545) | def add_remote(branchenv: lmdb.Environment, name: str, address: str) -> ...
  function get_remote_address (line 578) | def get_remote_address(branchenv: lmdb.Environment, name: str) -> str:
  function remove_remote (line 613) | def remove_remote(branchenv: lmdb.Environment, name: str) -> str:
  function get_remote_names (line 648) | def get_remote_names(branchenv):

FILE: src/hangar/records/parsing.py
  function generate_sample_name (line 33) | def generate_sample_name() -> str:
  function repo_version_raw_spec_from_raw_string (line 52) | def repo_version_raw_spec_from_raw_string(v_str: str) -> Version:
  function repo_version_db_key (line 61) | def repo_version_db_key() -> bytes:
  function repo_version_db_val_from_raw_val (line 75) | def repo_version_db_val_from_raw_val(v_spec: Version) -> bytes:
  function repo_version_raw_val_from_db_val (line 96) | def repo_version_raw_val_from_db_val(db_val: bytes) -> Version:
  function repo_head_db_key (line 123) | def repo_head_db_key() -> bytes:
  function repo_head_db_val_from_raw_val (line 137) | def repo_head_db_val_from_raw_val(branch_name: str) -> bytes:
  function repo_head_raw_val_from_db_val (line 143) | def repo_head_raw_val_from_db_val(db_val: bytes) -> str:
  function repo_branch_head_db_key_from_raw_key (line 155) | def repo_branch_head_db_key_from_raw_key(branch_name: str) -> bytes:
  function repo_branch_head_db_val_from_raw_val (line 159) | def repo_branch_head_db_val_from_raw_val(commit_hash: str) -> bytes:
  function repo_branch_head_raw_key_from_db_key (line 166) | def repo_branch_head_raw_key_from_db_key(db_key: bytes) -> str:
  function repo_branch_head_raw_val_from_db_val (line 170) | def repo_branch_head_raw_val_from_db_val(db_val: bytes) -> str:
  function repo_writer_lock_db_key (line 186) | def repo_writer_lock_db_key() -> bytes:
  function repo_writer_lock_sentinal_db_val (line 190) | def repo_writer_lock_sentinal_db_val() -> bytes:
  function repo_writer_lock_force_release_sentinal (line 194) | def repo_writer_lock_force_release_sentinal() -> str:
  function repo_writer_lock_db_val_from_raw_val (line 201) | def repo_writer_lock_db_val_from_raw_val(lock_uuid: str) -> bytes:
  function repo_writer_lock_raw_val_from_db_val (line 208) | def repo_writer_lock_raw_val_from_db_val(db_val: bytes) -> str:
  function remote_db_key_from_raw_key (line 215) | def remote_db_key_from_raw_key(remote_name: str) -> bytes:
  function remote_raw_key_from_db_key (line 231) | def remote_raw_key_from_db_key(db_key: bytes, *, _SPLT=len(K_REMOTES)) -...
  function remote_db_val_from_raw_val (line 247) | def remote_db_val_from_raw_val(grpc_address: str) -> bytes:
  function remote_raw_val_from_db_val (line 263) | def remote_raw_val_from_db_val(db_val: bytes) -> str:
  class CommitAncestorSpec (line 288) | class CommitAncestorSpec(NamedTuple):
  class CommitUserSpec (line 294) | class CommitUserSpec(NamedTuple):
  class DigestAndUserSpec (line 301) | class DigestAndUserSpec(NamedTuple):
  class DigestAndAncestorSpec (line 306) | class DigestAndAncestorSpec(NamedTuple):
  class DigestAndBytes (line 311) | class DigestAndBytes(NamedTuple):
  class DigestAndDbRefs (line 316) | class DigestAndDbRefs(NamedTuple):
  function _hash_func (line 321) | def _hash_func(recs: bytes) -> str:
  function cmt_final_digest (line 337) | def cmt_final_digest(parent_digest: str, spec_digest: str, refs_digest: ...
  function commit_parent_db_key_from_raw_key (line 378) | def commit_parent_db_key_from_raw_key(commit_hash: str) -> bytes:
  function commit_parent_db_val_from_raw_val (line 382) | def commit_parent_db_val_from_raw_val(master_ancestor: str,
  function commit_parent_raw_key_from_db_key (line 397) | def commit_parent_raw_key_from_db_key(db_key: bytes) -> str:
  function commit_parent_raw_val_from_db_val (line 401) | def commit_parent_raw_val_from_db_val(db_val: bytes) -> DigestAndAncesto...
  function commit_ref_db_key_from_raw_key (line 439) | def commit_ref_db_key_from_raw_key(commit_hash: str) -> bytes:
  function _commit_ref_joined_kv_digest (line 443) | def _commit_ref_joined_kv_digest(joined_db_kvs: Iterable[bytes]) -> str:
  function commit_ref_db_val_from_raw_val (line 471) | def commit_ref_db_val_from_raw_val(db_kvs: Iterable[Tuple[bytes, bytes]]...
  function commit_ref_raw_val_from_db_val (line 492) | def commit_ref_raw_val_from_db_val(commit_db_val: bytes) -> DigestAndDbR...
  function commit_spec_db_key_from_raw_key (line 528) | def commit_spec_db_key_from_raw_key(commit_hash: str) -> bytes:
  function commit_spec_db_val_from_raw_val (line 532) | def commit_spec_db_val_from_raw_val(commit_time: float, commit_message: ...
  function commit_spec_raw_val_from_db_val (line 568) | def commit_spec_raw_val_from_db_val(db_val: bytes) -> DigestAndUserSpec:

FILE: src/hangar/records/queries.py
  class RecordQuery (line 26) | class RecordQuery(CursorRangeIterator):
    method __init__ (line 28) | def __init__(self, dataenv: lmdb.Environment):
    method _traverse_all_records (line 33) | def _traverse_all_records(self) -> Iterator[Tuple[bytes, bytes]]:
    method _traverse_column_schema_records (line 50) | def _traverse_column_schema_records(self, keys: bool = True, values: b...
    method _traverse_column_data_records (line 75) | def _traverse_column_data_records(self,
    method column_names (line 124) | def column_names(self) -> List[str]:
    method column_count (line 136) | def column_count(self) -> int:
    method data_hashes (line 146) | def data_hashes(self) -> List[str]:
    method column_data_records (line 167) | def column_data_records(self, column_name: str) -> Iterable[RawDataTup...
    method column_data_hashes (line 185) | def column_data_hashes(self, column_name: str) -> Set[DataRecordVal]:
    method column_data_count (line 204) | def column_data_count(self, column_name: str) -> int:
    method schema_specs (line 222) | def schema_specs(self):
    method schema_hashes (line 237) | def schema_hashes(self) -> List[str]:
    method data_hash_to_schema_hash (line 251) | def data_hash_to_schema_hash(self) -> Dict[str, str]:
    method column_schema_layout (line 270) | def column_schema_layout(self, column: str) -> str:

FILE: src/hangar/records/summarize.py
  function log (line 25) | def log(branchenv: lmdb.Environment,
  function list_history (line 90) | def list_history(refenv, branchenv, branch_name=None, commit_hash=None):
  function details (line 145) | def details(env: lmdb.Environment, line_limit=100, line_length=100) -> S...
  function summary (line 192) | def summary(env, *, branch='', commit='') -> StringIO:
  function status (line 270) | def status(hashenv: lmdb.Environment, branch_name: str, diff: DiffOut) -...

FILE: src/hangar/records/vcompat.py
  function set_repository_software_version (line 17) | def set_repository_software_version(branchenv: lmdb.Environment,
  function get_repository_software_version_spec (line 50) | def get_repository_software_version_spec(branchenv: lmdb.Environment) ->...
  function startup_check_repo_version (line 90) | def startup_check_repo_version(repo_path: Path) -> Version:
  function is_repo_software_version_compatible (line 133) | def is_repo_software_version_compatible(repo_v: Version, curr_v: Version...

FILE: src/hangar/remote/chunks.py
  function chunk_bytes (line 15) | def chunk_bytes(bytesData, *, chunkSize: int = 32_000) -> Iterable[bytes]:
  function clientCommitChunkedIterator (line 39) | def clientCommitChunkedIterator(commit: str, parentVal: bytes, specVal: ...
  function tensorChunkedIterator (line 73) | def tensorChunkedIterator(buf, uncomp_nbytes, pb2_request,
  function missingHashIterator (line 91) | def missingHashIterator(commit, hash_bytes, err, pb2_func):
  function missingHashRequestIterator (line 106) | def missingHashRequestIterator(commit, hash_bytes, pb2_func):
  class DataIdent (line 123) | class DataIdent(NamedTuple):
  class DataRecord (line 128) | class DataRecord(NamedTuple):
  function _serialize_arr (line 134) | def _serialize_arr(arr: np.ndarray) -> bytes:
  function _deserialize_arr (line 144) | def _deserialize_arr(raw: bytes) -> np.ndarray:
  function _serialize_str (line 151) | def _serialize_str(data: str) -> bytes:
  function _deserialize_str (line 158) | def _deserialize_str(raw: bytes) -> str:
  function _serialize_bytes (line 162) | def _serialize_bytes(data: bytes) -> bytes:
  function _deserialize_bytes (line 169) | def _deserialize_bytes(data: bytes) -> bytes:
  function serialize_ident (line 173) | def serialize_ident(digest: str, schema: str) -> bytes:
  function deserialize_ident (line 184) | def deserialize_ident(raw: bytes) -> DataIdent:
  function serialize_data (line 192) | def serialize_data(data: Union[np.ndarray, str, bytes]) -> Tuple[int, by...
  function deserialize_data (line 203) | def deserialize_data(dtype_code: int, raw_data: bytes) -> Union[np.ndarr...
  function serialize_record (line 214) | def serialize_record(data: Union[np.ndarray, str, bytes], digest: str, s...
  function deserialize_record (line 227) | def deserialize_record(raw: bytes) -> DataRecord:
  function serialize_record_pack (line 237) | def serialize_record_pack(records: List[bytes]) -> bytes:
  function deserialize_record_pack (line 246) | def deserialize_record_pack(raw: bytes) -> List[bytes]:

FILE: src/hangar/remote/client.py
  class HangarClient (line 33) | class HangarClient(object):
    method __init__ (line 56) | def __init__(self,
    method _setup_client_channel_config (line 88) | def _setup_client_channel_config(self):
    method close (line 142) | def close(self):
    method ping_pong (line 149) | def ping_pong(self) -> str:
    method push_branch_record (line 161) | def push_branch_record(self, name: str, head: str
    method fetch_branch_record (line 182) | def fetch_branch_record(self, name: str
    method push_commit_record (line 202) | def push_commit_record(self, commit: str, parentVal: bytes, specVal: b...
    method fetch_commit_record (line 230) | def fetch_commit_record(self, commit: str) -> Tuple[str, bytes, bytes,...
    method fetch_schema (line 260) | def fetch_schema(self, schema_hash: str) -> Tuple[str, bytes]:
    method push_schema (line 283) | def push_schema(self, schema_hash: str,
    method fetch_data (line 305) | def fetch_data(
    method fetch_data_origin (line 391) | def fetch_data_origin(self, digests: Sequence[str]) -> List[hangar_ser...
    method push_find_data_origin (line 405) | def push_find_data_origin(self, digests):
    method push_data_begin_context (line 419) | def push_data_begin_context(self):
    method push_data_end_context (line 424) | def push_data_end_context(self):
    method push_data (line 429) | def push_data(self, schema_hash: str, digests: Sequence[str],
    method fetch_find_missing_commits (line 546) | def fetch_find_missing_commits(self, branch_name):
    method push_find_missing_commits (line 556) | def push_find_missing_commits(self, branch_name):
    method fetch_find_missing_hash_records (line 570) | def fetch_find_missing_hash_records(self, commit):
    method push_find_missing_hash_records (line 590) | def push_find_missing_hash_records(self, commit, tmpDB: lmdb.Environme...
    method fetch_find_missing_schemas (line 623) | def fetch_find_missing_schemas(self, commit):
    method push_find_missing_schemas (line 634) | def push_find_missing_schemas(self, commit, tmpDB: lmdb.Environment = ...

FILE: src/hangar/remote/content.py
  class ContentWriter (line 16) | class ContentWriter(object):
    method __init__ (line 29) | def __init__(self, envs: Environments):
    method commit (line 34) | def commit(self, commit: str, parentVal: bytes, specVal: bytes,
    method schema (line 71) | def schema(self, schema_hash: str, schemaVal: bytes) -> Union[str, bool]:
  class DataWriter (line 99) | class DataWriter:
    method __init__ (line 101) | def __init__(self, envs):
    method __enter__ (line 110) | def __enter__(self):
    method __exit__ (line 115) | def __exit__(self, *exc):
    method is_cm (line 125) | def is_cm(self):
    method _open_new_backend (line 128) | def _open_new_backend(self, schema):
    method _get_schema_object (line 136) | def _get_schema_object(self, schema_hash):
    method _get_changed_schema_object (line 149) | def _get_changed_schema_object(self, schema_hash, backend, backend_opt...
    method data (line 160) | def data(self,
  class ContentReader (line 212) | class ContentReader(object):
    method __init__ (line 224) | def __init__(self, envs):
    method commit (line 229) | def commit(self, commit: str) -> Union[RawCommitContent, bool]:
    method schema (line 264) | def schema(self, schema_hash: str) -> Union[bytes, bool]:

FILE: src/hangar/remote/hangar_service_pb2.pyi
  class _DataLocation (line 47) | class _DataLocation(google___protobuf___internal___enum_type_wrapper____...
  class _DataType (line 64) | class _DataType(google___protobuf___internal___enum_type_wrapper____Enum...
  class PushBeginContextRequest (line 76) | class PushBeginContextRequest(google___protobuf___message___Message):
    method __init__ (line 80) | def __init__(self,
    method ClearField (line 84) | def ClearField(self, field_name: typing_extensions___Literal[u"client_...
  class PushBeginContextReply (line 87) | class PushBeginContextReply(google___protobuf___message___Message):
    method err (line 91) | def err(self) -> type___ErrorProto: ...
    method __init__ (line 93) | def __init__(self,
    method HasField (line 97) | def HasField(self, field_name: typing_extensions___Literal[u"err",b"er...
    method ClearField (line 98) | def ClearField(self, field_name: typing_extensions___Literal[u"err",b"...
  class PushEndContextRequest (line 101) | class PushEndContextRequest(google___protobuf___message___Message):
    method __init__ (line 105) | def __init__(self,
    method ClearField (line 109) | def ClearField(self, field_name: typing_extensions___Literal[u"client_...
  class PushEndContextReply (line 112) | class PushEndContextReply(google___protobuf___message___Message):
    method err (line 116) | def err(self) -> type___ErrorProto: ...
    method __init__ (line 118) | def __init__(self,
    method HasField (line 122) | def HasField(self, field_name: typing_extensions___Literal[u"err",b"er...
    method ClearField (line 123) | def ClearField(self, field_name: typing_extensions___Literal[u"err",b"...
  class ErrorProto (line 126) | class ErrorProto(google___protobuf___message___Message):
    method __init__ (line 131) | def __init__(self,
    method ClearField (line 136) | def ClearField(self, field_name: typing_extensions___Literal[u"code",b...
  class BranchRecord (line 139) | class BranchRecord(google___protobuf___message___Message):
    method __init__ (line 144) | def __init__(self,
    method ClearField (line 149) | def ClearField(self, field_name: typing_extensions___Literal[u"commit"...
  class HashRecord (line 152) | class HashRecord(google___protobuf___message___Message):
    method __init__ (line 157) | def __init__(self,
    method ClearField (line 162) | def ClearField(self, field_name: typing_extensions___Literal[u"digest"...
  class CommitRecord (line 165) | class CommitRecord(google___protobuf___message___Message):
    method __init__ (line 171) | def __init__(self,
    method ClearField (line 177) | def ClearField(self, field_name: typing_extensions___Literal[u"parent"...
  class SchemaRecord (line 180) | class SchemaRecord(google___protobuf___message___Message):
    method __init__ (line 185) | def __init__(self,
    method ClearField (line 190) | def ClearField(self, field_name: typing_extensions___Literal[u"blob",b...
  class DataOriginRequest (line 193) | class DataOriginRequest(google___protobuf___message___Message):
    method __init__ (line 197) | def __init__(self,
    method ClearField (line 201) | def ClearField(self, field_name: typing_extensions___Literal[u"digest"...
  class DataOriginReply (line 204) | class DataOriginReply(google___protobuf___message___Message):
    class CompressionOptsEntry (line 206) | class CompressionOptsEntry(google___protobuf___message___Message):
      method __init__ (line 211) | def __init__(self,
      method ClearField (line 216) | def ClearField(self, field_name: typing_extensions___Literal[u"key",...
    method compression_opts (line 226) | def compression_opts(self) -> typing___MutableMapping[typing___Text, t...
    method __init__ (line 228) | def __init__(self,
    method ClearField (line 237) | def ClearField(self, field_name: typing_extensions___Literal[u"compres...
  class PushFindDataOriginRequest (line 240) | class PushFindDataOriginRequest(google___protobuf___message___Message):
    method __init__ (line 246) | def __init__(self,
    method ClearField (line 252) | def ClearField(self, field_name: typing_extensions___Literal[u"compres...
  class PushFindDataOriginReply (line 255) | class PushFindDataOriginReply(google___protobuf___message___Message):
    class CompressionOptsExpectedEntry (line 257) | class CompressionOptsExpectedEntry(google___protobuf___message___Messa...
      method __init__ (line 262) | def __init__(self,
      method ClearField (line 267) | def ClearField(self, field_name: typing_extensions___Literal[u"key",...
    method compression_opts_expected (line 276) | def compression_opts_expected(self) -> typing___MutableMapping[typing_...
    method __init__ (line 278) | def __init__(self,
    method ClearField (line 286) | def ClearField(self, field_name: typing_extensions___Literal[u"compres...
  class PingRequest (line 289) | class PingRequest(google___protobuf___message___Message):
    method __init__ (line 292) | def __init__(self,
  class PingReply (line 296) | class PingReply(google___protobuf___message___Message):
    method __init__ (line 300) | def __init__(self,
    method ClearField (line 304) | def ClearField(self, field_name: typing_extensions___Literal[u"result"...
  class GetClientConfigRequest (line 307) | class GetClientConfigRequest(google___protobuf___message___Message):
    method __init__ (line 310) | def __init__(self,
  class GetClientConfigReply (line 314) | class GetClientConfigReply(google___protobuf___message___Message):
    class ConfigEntry (line 316) | class ConfigEntry(google___protobuf___message___Message):
      method __init__ (line 321) | def __init__(self,
      method ClearField (line 326) | def ClearField(self, field_name: typing_extensions___Literal[u"key",...
    method config (line 331) | def config(self) -> typing___MutableMapping[typing___Text, typing___Te...
    method error (line 334) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 336) | def __init__(self,
    method HasField (line 341) | def HasField(self, field_name: typing_extensions___Literal[u"error",b"...
    method ClearField (line 342) | def ClearField(self, field_name: typing_extensions___Literal[u"config"...
  class FetchBranchRecordRequest (line 345) | class FetchBranchRecordRequest(google___protobuf___message___Message):
    method rec (line 349) | def rec(self) -> type___BranchRecord: ...
    method __init__ (line 351) | def __init__(self,
    method HasField (line 355) | def HasField(self, field_name: typing_extensions___Literal[u"rec",b"re...
    method ClearField (line 356) | def ClearField(self, field_name: typing_extensions___Literal[u"rec",b"...
  class FetchBranchRecordReply (line 359) | class FetchBranchRecordReply(google___protobuf___message___Message):
    method rec (line 363) | def rec(self) -> type___BranchRecord: ...
    method error (line 366) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 368) | def __init__(self,
    method HasField (line 373) | def HasField(self, field_name: typing_extensions___Literal[u"error",b"...
    method ClearField (line 374) | def ClearField(self, field_name: typing_extensions___Literal[u"error",...
  class FetchDataRequest (line 377) | class FetchDataRequest(google___protobuf___message___Message):
    method __init__ (line 381) | def __init__(self,
    method ClearField (line 385) | def ClearField(self, field_name: typing_extensions___Literal[u"uri",b"...
  class FetchDataReply (line 388) | class FetchDataReply(google___protobuf___message___Message):
    method error (line 395) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 397) | def __init__(self,
    method HasField (line 404) | def HasField(self, field_name: typing_extensions___Literal[u"error",b"...
    method ClearField (line 405) | def ClearField(self, field_name: typing_extensions___Literal[u"error",...
  class FetchCommitRequest (line 408) | class FetchCommitRequest(google___protobuf___message___Message):
    method __init__ (line 412) | def __init__(self,
    method ClearField (line 416) | def ClearField(self, field_name: typing_extensions___Literal[u"commit"...
  class FetchCommitReply (line 419) | class FetchCommitReply(google___protobuf___message___Message):
    method record (line 425) | def record(self) -> type___CommitRecord: ...
    method error (line 428) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 430) | def __init__(self,
    method HasField (line 437) | def HasField(self, field_name: typing_extensions___Literal[u"error",b"...
    method ClearField (line 438) | def ClearField(self, field_name: typing_extensions___Literal[u"commit"...
  class FetchSchemaRequest (line 441) | class FetchSchemaRequest(google___protobuf___message___Message):
    method rec (line 445) | def rec(self) -> type___SchemaRecord: ...
    method __init__ (line 447) | def __init__(self,
    method HasField (line 451) | def HasField(self, field_name: typing_extensions___Literal[u"rec",b"re...
    method ClearField (line 452) | def ClearField(self, field_name: typing_extensions___Literal[u"rec",b"...
  class FetchSchemaReply (line 455) | class FetchSchemaReply(google___protobuf___message___Message):
    method rec (line 459) | def rec(self) -> type___SchemaRecord: ...
    method error (line 462) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 464) | def __init__(self,
    method HasField (line 469) | def HasField(self, field_name: typing_extensions___Literal[u"error",b"...
    method ClearField (line 470) | def ClearField(self, field_name: typing_extensions___Literal[u"error",...
  class PushBranchRecordRequest (line 473) | class PushBranchRecordRequest(google___protobuf___message___Message):
    method rec (line 477) | def rec(self) -> type___BranchRecord: ...
    method __init__ (line 479) | def __init__(self,
    method HasField (line 483) | def HasField(self, field_name: typing_extensions___Literal[u"rec",b"re...
    method ClearField (line 484) | def ClearField(self, field_name: typing_extensions___Literal[u"rec",b"...
  class PushBranchRecordReply (line 487) | class PushBranchRecordReply(google___protobuf___message___Message):
    method error (line 491) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 493) | def __init__(self,
    method HasField (line 497) | def HasField(self, field_name: typing_extensions___Literal[u"error",b"...
    method ClearField (line 498) | def ClearField(self, field_name: typing_extensions___Literal[u"error",...
  class PushDataRequest (line 501) | class PushDataRequest(google___protobuf___message___Message):
    method __init__ (line 509) | def __init__(self,
    method ClearField (line 517) | def ClearField(self, field_name: typing_extensions___Literal[u"data_ty...
  class PushDataReply (line 520) | class PushDataReply(google___protobuf___message___Message):
    method error (line 524) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 526) | def __init__(self,
    method HasField (line 530) | def HasField(self, field_name: typing_extensions___Literal[u"error",b"...
    method ClearField (line 531) | def ClearField(self, field_name: typing_extensions___Literal[u"error",...
  class PushCommitRequest (line 534) | class PushCommitRequest(google___protobuf___message___Message):
    method record (line 540) | def record(self) -> type___CommitRecord: ...
    method __init__ (line 542) | def __init__(self,
    method HasField (line 548) | def HasField(self, field_name: typing_extensions___Literal[u"record",b...
    method ClearField (line 549) | def ClearField(self, field_name: typing_extensions___Literal[u"commit"...
  class PushCommitReply (line 552) | class PushCommitReply(google___protobuf___message___Message):
    method error (line 556) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 558) | def __init__(self,
    method HasField (line 562) | def HasField(self, field_name: typing_extensions___Literal[u"error",b"...
    method ClearField (line 563) | def ClearField(self, field_name: typing_extensions___Literal[u"error",...
  class PushSchemaRequest (line 566) | class PushSchemaRequest(google___protobuf___message___Message):
    method rec (line 570) | def rec(self) -> type___SchemaRecord: ...
    method __init__ (line 572) | def __init__(self,
    method HasField (line 576) | def HasField(self, field_name: typing_extensions___Literal[u"rec",b"re...
    method ClearField (line 577) | def ClearField(self, field_name: typing_extensions___Literal[u"rec",b"...
  class PushSchemaReply (line 580) | class PushSchemaReply(google___protobuf___message___Message):
    method error (line 584) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 586) | def __init__(self,
    method HasField (line 590) | def HasField(self, field_name: typing_extensions___Literal[u"error",b"...
    method ClearField (line 591) | def ClearField(self, field_name: typing_extensions___Literal[u"error",...
  class FindMissingCommitsRequest (line 594) | class FindMissingCommitsRequest(google___protobuf___message___Message):
    method branch (line 599) | def branch(self) -> type___BranchRecord: ...
    method __init__ (line 601) | def __init__(self,
    method HasField (line 606) | def HasField(self, field_name: typing_extensions___Literal[u"branch",b...
    method ClearField (line 607) | def ClearField(self, field_name: typing_extensions___Literal[u"branch"...
  class FindMissingCommitsReply (line 610) | class FindMissingCommitsReply(google___protobuf___message___Message):
    method branch (line 615) | def branch(self) -> type___BranchRecord: ...
    method error (line 618) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 620) | def __init__(self,
    method HasField (line 626) | def HasField(self, field_name: typing_extensions___Literal[u"branch",b...
    method ClearField (line 627) | def ClearField(self, field_name: typing_extensions___Literal[u"branch"...
  class FindMissingHashRecordsRequest (line 630) | class FindMissingHashRecordsRequest(google___protobuf___message___Message):
    method __init__ (line 636) | def __init__(self,
    method ClearField (line 642) | def ClearField(self, field_name: typing_extensions___Literal[u"commit"...
  class FindMissingHashRecordsReply (line 645) | class FindMissingHashRecordsReply(google___protobuf___message___Message):
    method error (line 652) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 654) | def __init__(self,
    method HasField (line 661) | def HasField(self, field_name: typing_extensions___Literal[u"error",b"...
    method ClearField (line 662) | def ClearField(self, field_name: typing_extensions___Literal[u"commit"...
  class FindMissingSchemasRequest (line 665) | class FindMissingSchemasRequest(google___protobuf___message___Message):
    method __init__ (line 670) | def __init__(self,
    method ClearField (line 675) | def ClearField(self, field_name: typing_extensions___Literal[u"commit"...
  class FindMissingSchemasReply (line 678) | class FindMissingSchemasReply(google___protobuf___message___Message):
    method error (line 684) | def error(self) -> type___ErrorProto: ...
    method __init__ (line 686) | def __init__(self,
    method HasField (line 692) | def HasField(self, field_name: typing_extensions___Literal[u"error",b"...
    method ClearField (line 693) | def ClearField(self, field_name: typing_extensions___Literal[u"commit"...

FILE: src/hangar/remote/hangar_service_pb2_grpc.py
  class HangarServiceStub (line 7) | class HangarServiceStub(object):
    method __init__ (line 10) | def __init__(self, channel):
  class HangarServiceServicer (line 118) | class HangarServiceServicer(object):
    method PING (line 121) | def PING(self, request, context):
    method GetClientConfig (line 127) | def GetClientConfig(self, request, context):
    method FetchBranchRecord (line 133) | def FetchBranchRecord(self, request, context):
    method FetchData (line 139) | def FetchData(self, request, context):
    method FetchCommit (line 145) | def FetchCommit(self, request, context):
    method FetchSchema (line 151) | def FetchSchema(self, request, context):
    method PushBranchRecord (line 157) | def PushBranchRecord(self, request, context):
    method PushData (line 163) | def PushData(self, request_iterator, context):
    method PushCommit (line 169) | def PushCommit(self, request_iterator, context):
    method PushSchema (line 175) | def PushSchema(self, request, context):
    method FetchFindMissingCommits (line 181) | def FetchFindMissingCommits(self, request, context):
    method FetchFindMissingHashRecords (line 187) | def FetchFindMissingHashRecords(self, request_iterator, context):
    method FetchFindMissingSchemas (line 193) | def FetchFindMissingSchemas(self, request, context):
    method PushFindMissingCommits (line 199) | def PushFindMissingCommits(self, request, context):
    method PushFindMissingHashRecords (line 205) | def PushFindMissingHashRecords(self, request_iterator, context):
    method PushFindMissingSchemas (line 211) | def PushFindMissingSchemas(self, request, context):
    method FetchFindDataOrigin (line 217) | def FetchFindDataOrigin(self, request_iterator, context):
    method PushFindDataOrigin (line 223) | def PushFindDataOrigin(self, request_iterator, context):
    method PushBeginContext (line 229) | def PushBeginContext(self, request, context):
    method PushEndContext (line 235) | def PushEndContext(self, request, context):
  function add_HangarServiceServicer_to_server (line 242) | def add_HangarServiceServicer_to_server(servicer, server):
  class HangarService (line 351) | class HangarService(object):
    method PING (line 355) | def PING(request,
    method GetClientConfig (line 371) | def GetClientConfig(request,
    method FetchBranchRecord (line 387) | def FetchBranchRecord(request,
    method FetchData (line 403) | def FetchData(request,
    method FetchCommit (line 419) | def FetchCommit(request,
    method FetchSchema (line 435) | def FetchSchema(request,
    method PushBranchRecord (line 451) | def PushBranchRecord(request,
    method PushData (line 467) | def PushData(request_iterator,
    method PushCommit (line 483) | def PushCommit(request_iterator,
    method PushSchema (line 499) | def PushSchema(request,
    method FetchFindMissingCommits (line 515) | def FetchFindMissingCommits(request,
    method FetchFindMissingHashRecords (line 531) | def FetchFindMissingHashRecords(request_iterator,
    method FetchFindMissingSchemas (line 547) | def FetchFindMissingSchemas(request,
    method PushFindMissingCommits (line 563) | def PushFindMissingCommits(request,
    method PushFindMissingHashRecords (line 579) | def PushFindMissingHashRecords(request_iterator,
    method PushFindMissingSchemas (line 595) | def PushFindMissingSchemas(request,
    method FetchFindDataOrigin (line 611) | def FetchFindDataOrigin(request_iterator,
    method PushFindDataOrigin (line 627) | def PushFindDataOrigin(request_iterator,
    method PushBeginContext (line 643) | def PushBeginContext(request,
    method PushEndContext (line 659) | def PushEndContext(request,

FILE: src/hangar/remote/header_manipulator_client_interceptor.py
  class _GenericClientInterceptor (line 30) | class _GenericClientInterceptor(
    method __init__ (line 35) | def __init__(self, interceptor_function):
    method intercept_unary_unary (line 38) | def intercept_unary_unary(self, continuation, client_call_details, req...
    method intercept_unary_stream (line 44) | def intercept_unary_stream(self, continuation, client_call_details,
    method intercept_stream_unary (line 51) | def intercept_stream_unary(self, continuation, client_call_details,
    method intercept_stream_stream (line 58) | def intercept_stream_stream(self, continuation, client_call_details,
  function create_client_interceptor (line 66) | def create_client_interceptor(intercept_call):
  class _ClientCallDetails (line 70) | class _ClientCallDetails(
  function header_adder_interceptor (line 78) | def header_adder_interceptor(header, value):

FILE: src/hangar/remote/request_header_validator_interceptor.py
  function _unary_unary_rpc_terminator (line 54) | def _unary_unary_rpc_terminator(code, details):
  function _unary_stream_rpc_terminator (line 60) | def _unary_stream_rpc_terminator(code, details):  # pragma: no cover
  function _stream_unary_rpc_terminator (line 66) | def _stream_unary_rpc_terminator(code, details):  # pragma: no cover
  function _stream_stream_rpc_terminator (line 72) | def _stream_stream_rpc_terminator(code, details):  # pragma: no cover
  function _select_rpc_terminator (line 78) | def _select_rpc_terminator(intercepted_method):
  class RequestHeaderValidatorInterceptor (line 93) | class RequestHeaderValidatorInterceptor(grpc.ServerInterceptor):
    method __init__ (line 95) | def __init__(self, push_restricted, header, value, code, details):
    method intercept_service (line 102) | def intercept_service(self, continuation, handler_call_details):

FILE: src/hangar/remote/server.py
  function server_config (line 45) | def server_config(server_dir, *, create: bool = True) -> configparser.Co...
  function context_abort_with_exception_traceback (line 65) | def context_abort_with_exception_traceback(
  function context_abort_with_handled_error (line 77) | def context_abort_with_handled_error(
  class HangarServer (line 85) | class HangarServer(hangar_service_pb2_grpc.HangarServiceServicer):
    method __init__ (line 87) | def __init__(self, repo_path: Union[str, bytes, Path], overwrite=False):
    method close (line 125) | def close(self):
    method PING (line 132) | def PING(self, request, context):
    method GetClientConfig (line 138) | def GetClientConfig(self, request, context):
    method FetchBranchRecord (line 155) | def FetchBranchRecord(self, request, context):
    method PushBranchRecord (line 171) | def PushBranchRecord(self, request, context):
    method FetchCommit (line 196) | def FetchCommit(self, request, context):
    method PushCommit (line 232) | def PushCommit(self, request_iterator, context):
    method FetchSchema (line 262) | def FetchSchema(self, request, context):
    method PushSchema (line 287) | def PushSchema(self, request, context):
    method FetchFindDataOrigin (line 310) | def FetchFindDataOrigin(self, request_iterator, context):
    method FetchData (line 354) | def FetchData(self, request, context):
    method PushFindDataOrigin (line 408) | def PushFindDataOrigin(
    method PushBeginContext (line 458) | def PushBeginContext(self, request, context):
    method PushEndContext (line 472) | def PushEndContext(self, request, context):
    method PushData (line 486) | def PushData(
    method FetchFindMissingCommits (line 544) | def FetchFindMissingCommits(self, request, context):
    method PushFindMissingCommits (line 578) | def PushFindMissingCommits(self, request, context):
    method FetchFindMissingHashRecords (line 601) | def FetchFindMissingHashRecords(self, request_iterator, context):
    method PushFindMissingHashRecords (line 632) | def PushFindMissingHashRecords(self, request_iterator, context):
    method FetchFindMissingSchemas (line 656) | def FetchFindMissingSchemas(self, request, context):
    method PushFindMissingSchemas (line 675) | def PushFindMissingSchemas(self, request, context):
  function serve (line 689) | def serve(hangar_path: str,

FILE: src/hangar/remotes.py
  class Remotes (line 38) | class Remotes(object):
    method __init__ (line 51) | def __init__(self, env: Environments):
    method __verify_repo_initialized (line 57) | def __verify_repo_initialized(self):
    method add (line 70) | def add(self, name: str, address: str) -> RemoteInfo:
    method remove (line 109) | def remove(self, name: str) -> RemoteInfo:
    method list_all (line 134) | def list_all(self) -> List[RemoteInfo]:
    method ping (line 151) | def ping(self, name: str) -> float:
    method fetch (line 182) | def fetch(self, remote: str, branch: str) -> str:
    method fetch_data_sample (line 287) | def fetch_data_sample(self,
    method _select_digests_fetch_data_sample (line 400) | def _select_digests_fetch_data_sample(
    method fetch_data (line 491) | def fetch_data(self,
    method _form_missing_schema_digest_map (line 605) | def _form_missing_schema_digest_map(
    method _select_digest_fetch_data (line 637) | def _select_digest_fetch_data(
    method push (line 667) | def push(self, remote: str, branch: str,

FILE: src/hangar/repository.py
  class Repository (line 24) | class Repository(object):
    method __init__ (line 54) | def __init__(self, path: Union[str, Path], exists: bool = True):
    method _repr_pretty_ (line 76) | def _repr_pretty_(self, p, cycle):
    method __repr__ (line 95) | def __repr__(self):
    method __verify_repo_initialized (line 113) | def __verify_repo_initialized(self):
    method remote (line 128) | def remote(self) -> Remotes:
    method path (line 144) | def path(self) -> str:
    method writer_lock_held (line 156) | def writer_lock_held(self) -> bool:
    method version (line 168) | def version(self) -> str:
    method initialized (line 181) | def initialized(self) -> bool:
    method size_nbytes (line 193) | def size_nbytes(self) -> int:
    method size_human (line 210) | def size_human(self) -> str:
    method checkout (line 227) | def checkout(self,
    method clone (line 301) | def clone(self, user_name: str, user_email: str, remote_address: str,
    method init (line 348) | def init(self,
    method log (line 378) | def log(self,
    method summary (line 424) | def summary(self, *, branch: str = '', commit: str = '') -> None:
    method _details (line 449) | def _details(self, *, line_limit=100, line_length=100) -> None:  # pra...
    method _ecosystem_details (line 467) | def _ecosystem_details(self) -> dict:
    method diff (line 473) | def diff(self, master: str, dev: str) -> DiffAndConflicts:
    method merge (line 525) | def merge(self, message: str, master_branch: str, dev_branch: str) -> ...
    method create_branch (line 555) | def create_branch(self, name: str, base_commit: str = None) -> heads.B...
    method remove_branch (line 619) | def remove_branch(self, name: str, *, force_delete: bool = False) -> h...
    method list_branches (line 739) | def list_branches(self) -> List[str]:
    method verify_repo_integrity (line 751) | def verify_repo_integrity(self) -> bool:
    method force_release_writer_lock (line 816) | def force_release_writer_lock(self) -> bool:

FILE: src/hangar/txnctx.py
  class TxnRegisterSingleton (line 7) | class TxnRegisterSingleton(type):
    method __call__ (line 9) | def __call__(cls, *args, **kwargs):
  class TxnRegister (line 15) | class TxnRegister(metaclass=TxnRegisterSingleton):
    method __init__ (line 22) | def __init__(self):
    method _debug_ (line 29) | def _debug_(self):  # pragma: no cover
    method begin_writer_txn (line 38) | def begin_writer_txn(self, lmdbenv: lmdb.Environment,
    method begin_reader_txn (line 64) | def begin_reader_txn(self, lmdbenv: lmdb.Environment,
    method commit_writer_txn (line 90) | def commit_writer_txn(self, lmdbenv: lmdb.Environment) -> bool:
    method abort_reader_txn (line 126) | def abort_reader_txn(self, lmdbenv: lmdb.Environment) -> bool:

FILE: src/hangar/typesystem/base.py
  class ColumnLayout (line 6) | class ColumnLayout(String):
  class ColumnDType (line 11) | class ColumnDType(String):
  class SchemaHasherTcode (line 16) | class SchemaHasherTcode(String):
  class ColumnBase (line 20) | class ColumnBase(metaclass=checkedmeta):
    method __init__ (line 25) | def __init__(
    method _beopts (line 51) | def _beopts(self):
    method _beopts (line 61) | def _beopts(self):
    method _beopts (line 65) | def _beopts(self, backend_options):
    method column_layout (line 73) | def column_layout(self):
    method column_type (line 77) | def column_type(self):
    method schema_hasher_tcode (line 81) | def schema_hasher_tcode(self):
    method schema (line 85) | def schema(self):
    method schema_hash_digest (line 92) | def schema_hash_digest(self):
    method backend_from_heuristics (line 95) | def backend_from_heuristics(self, *args, **kwargs):
    method verify_data_compatible (line 98) | def verify_data_compatible(self, *args, **kwargs):
    method data_hasher_tcode (line 102) | def data_hasher_tcode(self):
    method data_hash_digest (line 105) | def data_hash_digest(self, *args, **kwargs):

FILE: src/hangar/typesystem/descriptors.py
  class Descriptor (line 75) | class Descriptor:
    method __init__ (line 77) | def __init__(self, name=None, **opts):
    method __set__ (line 81) | def __set__(self, instance, value):
  function Typed (line 85) | def Typed(expected_type, cls=None):
  function TypedSequence (line 101) | def TypedSequence(expected_element_types, cls=None):
  function OneOf (line 119) | def OneOf(expected_values, cls=None):
  function MaxSized (line 133) | def MaxSized(cls):
  function DictItems (line 151) | def DictItems(expected_keys_required, expected_values, cls=None):
  class String (line 178) | class String(Descriptor):
  class EmptyDict (line 184) | class EmptyDict(Descriptor):
  class OptionalDict (line 189) | class OptionalDict(Descriptor):
  class OptionalString (line 194) | class OptionalString(Descriptor):
  class Tuple (line 199) | class Tuple(Descriptor):
  class SizedIntegerTuple (line 205) | class SizedIntegerTuple(Tuple):
  class checkedmeta (line 209) | class checkedmeta(type):
    method __new__ (line 211) | def __new__(cls, clsname, bases, methods):

FILE: src/hangar/typesystem/ndarray.py
  class NdarraySchemaType (line 9) | class NdarraySchemaType(String):
  class NdarrayColumnType (line 14) | class NdarrayColumnType(String):
  class DataHasherTcode (line 19) | class DataHasherTcode(String):
  class NdarraySchemaBase (line 23) | class NdarraySchemaBase(ColumnBase):
    method __init__ (line 28) | def __init__(
    method backend_from_heuristics (line 53) | def backend_from_heuristics(self):
    method schema_type (line 69) | def schema_type(self):
    method shape (line 73) | def shape(self):
    method dtype (line 77) | def dtype(self):
    method backend (line 81) | def backend(self):
    method backend_options (line 85) | def backend_options(self):
    method data_hash_digest (line 88) | def data_hash_digest(self, data: np.ndarray) -> str:
    method change_backend (line 91) | def change_backend(self, backend, backend_options=None):
    method data_nbytes (line 106) | def data_nbytes(self, obj: np.ndarray):
  class NdarrayFixedShapeBackends (line 111) | class NdarrayFixedShapeBackends(OptionalString):
  class FixedShapeSchemaType (line 116) | class FixedShapeSchemaType(String):
  class NdarrayFixedShape (line 120) | class NdarrayFixedShape(NdarraySchemaBase):
    method __init__ (line 127) | def __init__(self, *args, **kwargs):
    method verify_data_compatible (line 142) | def verify_data_compatible(self, data):
  class NdarrayVariableShapeBackends (line 164) | class NdarrayVariableShapeBackends(OptionalString):
  class VariableShapeSchemaType (line 169) | class VariableShapeSchemaType(String):
  class NdarrayVariableShape (line 173) | class NdarrayVariableShape(NdarraySchemaBase):
    method __init__ (line 180) | def __init__(self, *args, **kwargs):
    method verify_data_compatible (line 195) | def verify_data_compatible(self, data):

FILE: src/hangar/typesystem/pybytes.py
  class BytesDType (line 8) | class BytesDType(Descriptor):
  class BytesSchemaType (line 18) | class BytesSchemaType(String):
  class BytesColumnType (line 23) | class BytesColumnType(String):
  class DataHasherTcode (line 28) | class DataHasherTcode(String):
  class BytesSchemaBase (line 32) | class BytesSchemaBase(ColumnBase):
    method __init__ (line 37) | def __init__(
    method backend_from_heuristics (line 62) | def backend_from_heuristics(self):
    method schema_type (line 66) | def schema_type(self):
    method dtype (line 70) | def dtype(self):
    method backend (line 74) | def backend(self):
    method backend_options (line 78) | def backend_options(self):
    method data_hash_digest (line 81) | def data_hash_digest(self, data: str) -> str:
    method change_backend (line 84) | def change_backend(self, backend, backend_options=None):
  class BytesVariableShapeBackends (line 102) | class BytesVariableShapeBackends(OptionalString):
  class VariableShapeSchemaType (line 107) | class VariableShapeSchemaType(String):
  class BytesVariableShape (line 111) | class BytesVariableShape(BytesSchemaBase):
    method __init__ (line 117) | def __init__(self, *args, **kwargs):
    method verify_data_compatible (line 132) | def verify_data_compatible(self, data):

FILE: src/hangar/typesystem/pystring.py
  class StringDType (line 8) | class StringDType(Descriptor):
  class StringSchemaType (line 18) | class StringSchemaType(String):
  class StrColumnType (line 23) | class StrColumnType(String):
  class DataHasherTcode (line 28) | class DataHasherTcode(String):
  class StringSchemaBase (line 32) | class StringSchemaBase(ColumnBase):
    method __init__ (line 37) | def __init__(
    method backend_from_heuristics (line 62) | def backend_from_heuristics(self):
    method schema_type (line 66) | def schema_type(self):
    method dtype (line 70) | def dtype(self):
    method backend (line 74) | def backend(self):
    method backend_options (line 78) | def backend_options(self):
    method data_hash_digest (line 81) | def data_hash_digest(self, data: str) -> str:
    method change_backend (line 84) | def change_backend(self, backend, backend_options=None):
    method data_nbytes (line 100) | def data_nbytes(self, obj: str):
  class StringVariableShapeBackends (line 105) | class StringVariableShapeBackends(OptionalString):
  class VariableShapeSchemaType (line 110) | class VariableShapeSchemaType(String):
  class StringVariableShape (line 114) | class StringVariableShape(StringSchemaBase):
    method __init__ (line 120) | def __init__(self, *args, **kwargs):
    method verify_data_compatible (line 135) | def verify_data_compatible(self, data):

FILE: src/hangar/utils.py
  function bound (line 19) | def bound(low: NumType, high: NumType, value: NumType) -> NumType:
  function calc_num_threadpool_workers (line 38) | def calc_num_threadpool_workers() -> int:
  function is_64bits (line 43) | def is_64bits():
  function set_blosc_nthreads (line 49) | def set_blosc_nthreads() -> int:  # pragma: no cover
  function random_string (line 72) | def random_string(
  function is_suitable_user_key (line 90) | def is_suitable_user_key(key: Union[str, int]) -> bool:
  function is_ascii (line 120) | def is_ascii(str_data: str) -> bool:
  function pairwise (line 142) | def pairwise(iterable):
  function unique_everseen (line 149) | def unique_everseen(iterable, key=None):
  function ilen (line 171) | def ilen(iterable):
  function grouper (line 187) | def grouper(iterable, n, fillvalue=None):
  function file_size (line 208) | def file_size(p: Path) -> int:  # pragma: no cover
  function folder_size (line 232) | def folder_size(p: Path, *, recurse: bool = False) -> int:
  function is_valid_directory_path (line 259) | def is_valid_directory_path(p: Path) -> Path:
  function format_bytes (line 301) | def format_bytes(n: int) -> str:
  function parse_bytes (line 348) | def parse_bytes(s: str) -> int:
  function readme_contents (line 380) | def readme_contents(user_name: str, user_email: str) -> StringIO:

FILE: tests/bulk_importer/test_bulk_importer.py
  function assert_equal (line 5) | def assert_equal(arr, arr2):
  function test_bulk_importer_ndarray (line 10) | def test_bulk_importer_ndarray(repo):
  function test_bulk_importer_pystr (line 59) | def test_bulk_importer_pystr(repo):
  function test_bulk_importer_pybytes (line 104) | def test_bulk_importer_pybytes(repo):
  function test_bulk_importer_two_col_pybytes_pystr (line 150) | def test_bulk_importer_two_col_pybytes_pystr(repo):
  function test_signature_wrong (line 214) | def test_signature_wrong(repo):

FILE: tests/conftest.py
  function monkeysession (line 20) | def monkeysession(request):
  function classrepo (line 28) | def classrepo(tmp_path_factory) -> Repository:
  function managed_tmpdir (line 64) | def managed_tmpdir(monkeypatch, tmp_path):
  function managed_tmpdir_class (line 80) | def managed_tmpdir_class(monkeysession, tmp_path_factory):
  function repo (line 99) | def repo(managed_tmpdir) -> Repository:
  function aset_samples_initialized_repo (line 107) | def aset_samples_initialized_repo(repo) -> Repository:
  function aset_subsamples_initialized_repo (line 116) | def aset_subsamples_initialized_repo(repo) -> Repository:
  function repo_20_filled_samples (line 126) | def repo_20_filled_samples(request, aset_samples_initialized_repo, array...
  function repo_20_filled_subsamples (line 141) | def repo_20_filled_subsamples(request, aset_subsamples_initialized_repo,...
  function repo_300_filled_samples (line 158) | def repo_300_filled_samples(request, aset_samples_initialized_repo, arra...
  function repo_20_filled_samples2 (line 171) | def repo_20_filled_samples2(repo) -> Repository:
  function aset_samples_var_shape_initialized_repo (line 185) | def aset_samples_var_shape_initialized_repo(request, repo) -> Repository:
  function aset_samples_initialized_w_checkout (line 195) | def aset_samples_initialized_w_checkout(aset_samples_initialized_repo) -...
  function array5by7 (line 202) | def array5by7():
  function randomsizedarray (line 207) | def randomsizedarray():
  function two_commit_filled_samples_repo (line 214) | def two_commit_filled_samples_repo(request, repo, array5by7) -> Repository:
  function repo_1_br_no_conf (line 234) | def repo_1_br_no_conf(repo) -> Repository:
  function repo_2_br_no_conf (line 257) | def repo_2_br_no_conf(repo_1_br_no_conf) -> Repository:
  function mock_server_config (line 271) | def mock_server_config(*args, **kwargs):
  function server_instance (line 287) | def server_instance(monkeypatch, managed_tmpdir, worker_id):
  function server_instance_class (line 307) | def server_instance_class(monkeysession, tmp_path_factory, worker_id):
  function written_two_cmt_server_repo (line 334) | def written_two_cmt_server_repo(server_instance, two_commit_filled_sampl...
  function server_instance_push_restricted (line 343) | def server_instance_push_restricted(monkeypatch, managed_tmpdir, worker_...

FILE: tests/ml_datasets/test_dataset.py
  class TestInternalDatasetClass (line 18) | class TestInternalDatasetClass:
    method test_column_without_wrapping_list (line 20) | def test_column_without_wrapping_list(self, repo_20_filled_samples, ar...
    method test_no_column (line 31) | def test_no_column(self):
    method test_fails_on_write_enabled_columns (line 35) | def test_fails_on_write_enabled_columns(self, repo_20_filled_samples):
    method test_columns_without_local_data_and_without_key_argument (line 44) | def test_columns_without_local_data_and_without_key_argument(self, rep...
    method test_columns_without_common_keys_and_without_key_argument (line 71) | def test_columns_without_common_keys_and_without_key_argument(self, re...
    method test_keys_single_column_success (line 84) | def test_keys_single_column_success(self, repo_20_filled_samples):
    method test_keys_multiple_column_success (line 92) | def test_keys_multiple_column_success(self, repo_20_filled_samples):
    method test_keys_nested_column_success (line 104) | def test_keys_nested_column_success(self, repo_20_filled_subsamples):
    method test_keys_not_valid (line 122) | def test_keys_not_valid(self, repo_20_filled_samples):
    method test_keys_non_local (line 132) | def test_keys_non_local(self, repo_20_filled_samples):
  class TestNumpyDataset (line 154) | class TestNumpyDataset:
    method test_multiple_dataset_batched_loader (line 155) | def test_multiple_dataset_batched_loader(self, repo_20_filled_samples):
    method test_nested_column (line 189) | def test_nested_column(self, repo_20_filled_subsamples):
    method test_lots_of_data_with_multiple_backend (line 210) | def test_lots_of_data_with_multiple_backend(self, repo_300_filled_samp...
    method test_shuffle (line 220) | def test_shuffle(self, repo_20_filled_samples):
    method test_collate_fn (line 243) | def test_collate_fn(self, repo_20_filled_subsamples):
  class TestTorchDataset (line 281) | class TestTorchDataset(object):
    method test_multiple_dataset_loader (line 283) | def test_multiple_dataset_loader(self, repo_20_filled_samples):
    method test_return_as_dict (line 298) | def test_return_as_dict(self, repo_20_filled_samples):
    method test_lots_of_data_with_multiple_backend (line 311) | def test_lots_of_data_with_multiple_backend(self, repo_300_filled_samp...
    method test_lots_of_data_with_multiple_backend_multiple_worker_dataloader (line 324) | def test_lots_of_data_with_multiple_backend_multiple_worker_dataloader...
    method test_two_aset_loader_two_worker_dataloader (line 336) | def test_two_aset_loader_two_worker_dataloader(self, repo_20_filled_sa...
  class TestTfDataset (line 358) | class TestTfDataset(object):
    method test_dataset_loader (line 361) | def test_dataset_loader(self, repo_20_filled_samples):
    method test_variably_shaped (line 375) | def test_variably_shaped(self, aset_samples_var_shape_initialized_repo):
    method test_lots_of_data_with_multiple_backend (line 397) | def test_lots_of_data_with_multiple_backend(self, repo_300_filled_samp...
    method test_shuffle (line 407) | def test_shuffle(self, repo_20_filled_samples):

FILE: tests/property_based/test_pbt_column_flat.py
  function fixed_shape_repo_co_float32_aset_flat (line 26) | def fixed_shape_repo_co_float32_aset_flat(classrepo, request) -> Reposit...
  function variable_shape_repo_co_float32_aset_flat (line 44) | def variable_shape_repo_co_float32_aset_flat(classrepo, request) -> Repo...
  function variable_shape_repo_co_uint8_aset_flat (line 62) | def variable_shape_repo_co_uint8_aset_flat(classrepo, request) -> Reposi...
  function variable_shape_repo_co_str_aset_flat (line 80) | def variable_shape_repo_co_str_aset_flat(classrepo, request) -> Repository:
  function variable_shape_repo_co_bytes_aset_flat (line 95) | def variable_shape_repo_co_bytes_aset_flat(classrepo, request) -> Reposi...
  class TestColumn1 (line 144) | class TestColumn1:
    method test_arrayset_fixed_key_values (line 148) | def test_arrayset_fixed_key_values(self, key, val, fixed_shape_repo_co...
  class TestColumn2 (line 179) | class TestColumn2:
    method test_arrayset_variable_shape_float32 (line 183) | def test_arrayset_variable_shape_float32(self, key, val, variable_shap...
  class TestColumn3 (line 205) | class TestColumn3:
    method test_arrayset_variable_shape_uint8 (line 209) | def test_arrayset_variable_shape_uint8(self, key, val, variable_shape_...
  class TestColumn4 (line 229) | class TestColumn4:
    method test_str_column_variable_shape (line 233) | def test_str_column_variable_shape(self, key, val, variable_shape_repo...
  class TestColumn5 (line 253) | class TestColumn5:
    method test_bytes_column_variable_shape (line 257) | def test_bytes_column_variable_shape(self, key, val, variable_shape_re...

FILE: tests/property_based/test_pbt_column_nested.py
  function fixed_shape_repo_co_float32_aset_nested (line 28) | def fixed_shape_repo_co_float32_aset_nested(classrepo, request) -> Repos...
  function variable_shape_repo_co_float32_aset_nested (line 46) | def variable_shape_repo_co_float32_aset_nested(classrepo, request) -> Re...
  function variable_shape_repo_co_uint8_aset_nested (line 64) | def variable_shape_repo_co_uint8_aset_nested(classrepo, request) -> Repo...
  function variable_shape_repo_co_str_aset_nested (line 82) | def variable_shape_repo_co_str_aset_nested(classrepo, request) -> Reposi...
  function variable_shape_repo_co_bytes_aset_nested (line 97) | def variable_shape_repo_co_bytes_aset_nested(classrepo, request) -> Repo...
  class TestColumn1 (line 145) | class TestColumn1:
    method test_arrayset_fixed_key_values_nested (line 149) | def test_arrayset_fixed_key_values_nested(self, key, subkey, val, fixe...
  class TestColumn2 (line 183) | class TestColumn2:
    method test_arrayset_variable_shape_float32_nested (line 187) | def test_arrayset_variable_shape_float32_nested(self, key, val, subkey...
  class TestColumn3 (line 211) | class TestColumn3:
    method test_arrayset_variable_shape_uint8_nested (line 215) | def test_arrayset_variable_shape_uint8_nested(self, key, val, subkey, ...
  class TestStrColumn (line 237) | class TestStrColumn:
    method test_str_column_variable_shape_nested (line 241) | def test_str_column_variable_shape_nested(self, key, subkey, val, vari...
  class TestBytesColumn (line 261) | class TestBytesColumn:
    method test_bytes_column_variable_shape_nested (line 265) | def test_bytes_column_variable_shape_nested(self, key, subkey, val, va...

FILE: tests/test_backend_hdf5_00_hdf5_01.py
  function be_filehandle (line 6) | def be_filehandle(request):
  function test_blosc_filter_opts_result_in_correct_dataset_args (line 24) | def test_blosc_filter_opts_result_in_correct_dataset_args(
  function test_lzf_filter_opts_result_in_correct_dataset_args (line 38) | def test_lzf_filter_opts_result_in_correct_dataset_args(be_filehandle, c...
  function test_gzip_filter_opts_result_in_correct_dataset_args (line 51) | def test_gzip_filter_opts_result_in_correct_dataset_args(be_filehandle, ...
  function test_arrayset_init_with_various_blosc_opts (line 72) | def test_arrayset_init_with_various_blosc_opts(repo, array5by7, clib, cl...
  function test_arrayset_init_with_various_lzf_opts (line 99) | def test_arrayset_init_with_various_lzf_opts(repo, array5by7, cshuffle, ...
  function test_arrayset_init_with_various_gzip_opts (line 124) | def test_arrayset_init_with_various_gzip_opts(repo, array5by7, clevel, c...
  function test_arrayset_overflows_collection_size_collection_count (line 150) | def test_arrayset_overflows_collection_size_collection_count(be_code, re...

FILE: tests/test_branching.py
  function test_create_branch_fails_invalid_name (line 8) | def test_create_branch_fails_invalid_name(aset_samples_initialized_repo,...
  function test_list_branches_only_reports_master_upon_initialization (line 14) | def test_list_branches_only_reports_master_upon_initialization(repo):
  function test_cannot_create_new_branch_from_initialized_repo_with_no_commits (line 19) | def test_cannot_create_new_branch_from_initialized_repo_with_no_commits(...
  function test_can_create_new_branch_from_repo_with_one_commit (line 24) | def test_can_create_new_branch_from_repo_with_one_commit(repo):
  function test_cannot_duplicate_branch_name (line 36) | def test_cannot_duplicate_branch_name(aset_samples_initialized_repo):
  function test_create_multiple_branches_different_name_same_commit (line 42) | def test_create_multiple_branches_different_name_same_commit(aset_sample...
  function test_create_branch_by_specifying_base_commit (line 53) | def test_create_branch_by_specifying_base_commit(repo):
  function test_remove_branch_works_when_commits_align (line 79) | def test_remove_branch_works_when_commits_align(repo):
  function test_delete_branch_raises_runtime_error_when_history_not_merged (line 96) | def test_delete_branch_raises_runtime_error_when_history_not_merged(repo):
  function test_delete_branch_completes_when_history_not_merged_but_force_option_set (line 119) | def test_delete_branch_completes_when_history_not_merged_but_force_optio...
  function test_delete_branch_raises_value_error_if_invalid_branch_name (line 144) | def test_delete_branch_raises_value_error_if_invalid_branch_name(repo):
  function test_delete_branch_raises_permission_error_if_writer_lock_held (line 165) | def test_delete_branch_raises_permission_error_if_writer_lock_held(repo):
  function test_delete_branch_raises_permission_error_if_branch_requested_is_staging_head (line 187) | def test_delete_branch_raises_permission_error_if_branch_requested_is_st...
  function test_delete_branch_raises_permission_error_if_only_one_branch_left (line 206) | def test_delete_branch_raises_permission_error_if_only_one_branch_left(r...

FILE: tests/test_checkout.py
  class TestCheckout (line 7) | class TestCheckout(object):
    method test_write_checkout_specifying_commit_not_allowed_if_commit_exists (line 9) | def test_write_checkout_specifying_commit_not_allowed_if_commit_exists...
    method test_write_checkout_specifying_commit_not_allowed_if_commit_does_not_exists (line 14) | def test_write_checkout_specifying_commit_not_allowed_if_commit_does_n...
    method test_two_write_checkouts (line 19) | def test_two_write_checkouts(self, repo):
    method test_two_read_checkouts (line 25) | def test_two_read_checkouts(self, repo, array5by7):
    method test_write_with_read_checkout (line 40) | def test_write_with_read_checkout(self, aset_samples_initialized_repo,...
    method test_writer_aset_obj_not_accessible_after_close (line 48) | def test_writer_aset_obj_not_accessible_after_close(self, two_commit_f...
    method test_writer_aset_obj_arrayset_iter_values_not_accessible_after_close (line 62) | def test_writer_aset_obj_arrayset_iter_values_not_accessible_after_clo...
    method test_writer_aset_obj_arrayset_iter_items_not_accessible_after_close (line 74) | def test_writer_aset_obj_arrayset_iter_items_not_accessible_after_clos...
    method test_writer_aset_obj_not_accessible_after_commit_and_close (line 87) | def test_writer_aset_obj_not_accessible_after_commit_and_close(self, a...
    method test_reader_aset_obj_not_accessible_after_close (line 105) | def test_reader_aset_obj_not_accessible_after_close(self, two_commit_f...
    method test_reader_aset_obj_column_iter_values_not_accessible_after_close (line 119) | def test_reader_aset_obj_column_iter_values_not_accessible_after_close...
    method test_reader_aset_obj_arrayset_iter_items_not_accessible_after_close (line 131) | def test_reader_aset_obj_arrayset_iter_items_not_accessible_after_clos...
    method test_reader_arrayset_context_manager_not_accessible_after_close (line 144) | def test_reader_arrayset_context_manager_not_accessible_after_close(se...
    method test_writer_arrayset_context_manager_not_accessible_after_close (line 162) | def test_writer_arrayset_context_manager_not_accessible_after_close(se...
    method test_close_read_does_not_invalidate_write_checkout (line 180) | def test_close_read_does_not_invalidate_write_checkout(self, aset_samp...
    method test_close_write_does_not_invalidate_read_checkout (line 198) | def test_close_write_does_not_invalidate_read_checkout(self, aset_samp...
    method test_operate_on_arrayset_after_closing_old_checkout (line 216) | def test_operate_on_arrayset_after_closing_old_checkout(self, repo, ar...
    method test_operate_on_closed_checkout (line 229) | def test_operate_on_closed_checkout(self, repo, array5by7):
    method test_operate_on_arrayset_samples_after_commiting_but_not_closing_checkout (line 238) | def test_operate_on_arrayset_samples_after_commiting_but_not_closing_c...
    method test_operate_on_arraysets_after_commiting_but_not_closing_checkout (line 254) | def test_operate_on_arraysets_after_commiting_but_not_closing_checkout...
    method test_with_wrong_argument_value (line 274) | def test_with_wrong_argument_value(self, repo):
    method test_reset_staging_area_no_changes_made_does_not_work (line 290) | def test_reset_staging_area_no_changes_made_does_not_work(self, aset1_...
    method test_reset_staging_area_clears_arraysets (line 314) | def test_reset_staging_area_clears_arraysets(self, aset1_backend, aset...
    method test_checkout_dunder_contains_method (line 337) | def test_checkout_dunder_contains_method(self, repo_20_filled_samples,...
    method test_checkout_dunder_len_method (line 345) | def test_checkout_dunder_len_method(self, repo_20_filled_samples, write):
    method test_checkout_dunder_iter_method (line 351) | def test_checkout_dunder_iter_method(self, repo_20_filled_samples, wri...
    method test_checkout_keys_method (line 364) | def test_checkout_keys_method(self, repo_20_filled_samples, write):
    method test_checkout_values_method (line 373) | def test_checkout_values_method(self, repo_20_filled_samples, write):
    method test_checkout_items_method (line 388) | def test_checkout_items_method(self, repo_20_filled_samples, write):
    method test_checkout_log_method (line 404) | def test_checkout_log_method(self, repo_20_filled_samples, write):
  class TestBranchingMergingInCheckout (line 412) | class TestBranchingMergingInCheckout(object):
    method test_merge (line 414) | def test_merge(self, aset_samples_initialized_repo, array5by7):
    method test_merge_without_closing_previous_checkout (line 431) | def test_merge_without_closing_previous_checkout(self, aset_samples_in...
    method test_merge_multiple_checkouts_same_aset (line 441) | def test_merge_multiple_checkouts_same_aset(self, aset_samples_initial...
    method test_merge_multiple_checkouts_multiple_aset (line 469) | def test_merge_multiple_checkouts_multiple_aset(self, aset_samples_ini...
    method test_merge_diverged_conflict (line 492) | def test_merge_diverged_conflict(self, aset_samples_initialized_repo, ...
    method test_new_branch_from_where (line 518) | def test_new_branch_from_where(self, aset_samples_initialized_repo, ar...
    method test_cannot_checkout_branch_with_staged_changes (line 541) | def test_cannot_checkout_branch_with_staged_changes(self, aset_samples...
  function test_full_from_short_commit_digest (line 565) | def test_full_from_short_commit_digest(two_commit_filled_samples_repo):
  function test_writer_context_manager_objects_are_gc_removed_after_co_close (line 580) | def test_writer_context_manager_objects_are_gc_removed_after_co_close(tw...
  function test_reader_context_manager_objects_are_gc_removed_after_co_close (line 615) | def test_reader_context_manager_objects_are_gc_removed_after_co_close(tw...
  function test_checkout_branch_not_existing_does_not_hold_writer_lock (line 641) | def test_checkout_branch_not_existing_does_not_hold_writer_lock(two_comm...

FILE: tests/test_checkout_arrayset_access.py
  function test_arrayset_getattr_does_not_raise_permission_error_if_alive (line 9) | def test_arrayset_getattr_does_not_raise_permission_error_if_alive(write...
  function test_write_in_context_manager_no_loop (line 26) | def test_write_in_context_manager_no_loop(aset_samples_initialized_repo,...
  function test_write_in_context_manager_many_samples_looping (line 50) | def test_write_in_context_manager_many_samples_looping(aset_samples_init...
  function test_write_fails_if_checkout_closed (line 86) | def test_write_fails_if_checkout_closed(aset_samples_initialized_repo, a...
  function test_write_context_manager_fails_if_checkout_closed (line 105) | def test_write_context_manager_fails_if_checkout_closed(aset_samples_ini...
  function test_writer_co_read_single_aset_single_sample (line 127) | def test_writer_co_read_single_aset_single_sample(aset_samples_initializ...
  function test_writer_co_read_single_aset_multiple_samples (line 141) | def test_writer_co_read_single_aset_multiple_samples(aset_samples_initia...
  function test_writer_co_read_multiple_aset_single_samples (line 156) | def test_writer_co_read_multiple_aset_single_samples(aset_samples_initia...
  function test_writer_co_read_multtiple_aset_multiple_samples (line 180) | def test_writer_co_read_multtiple_aset_multiple_samples(aset_samples_ini...
  function test_writer_co_read_fails_nonexistant_aset_name (line 205) | def test_writer_co_read_fails_nonexistant_aset_name(aset_samples_initial...
  function test_writer_co_read_fails_nonexistant_sample_name (line 215) | def test_writer_co_read_fails_nonexistant_sample_name(aset_samples_initi...
  function test_writer_co_get_returns_none_on_nonexistant_sample_name (line 225) | def test_writer_co_get_returns_none_on_nonexistant_sample_name(aset_samp...
  function test_writer_co_read_in_context_manager_no_loop (line 235) | def test_writer_co_read_in_context_manager_no_loop(aset_samples_initiali...
  function test_writer_co_read_in_context_manager_many_samples_looping (line 248) | def test_writer_co_read_in_context_manager_many_samples_looping(aset_sam...
  function test_co_read_dunder_getitem_excepts_missing_sample (line 281) | def test_co_read_dunder_getitem_excepts_missing_sample(aset_samples_init...
  function test_co_read_get_except_missing_true_excepts_missing_sample (line 289) | def test_co_read_get_except_missing_true_excepts_missing_sample(aset_sam...
  function test_co_read_get_except_missing_false_returns_none_on_missing_sample (line 297) | def test_co_read_get_except_missing_false_returns_none_on_missing_sample...
  function test_writer_co_aset_finds_connection_manager_of_any_aset_in_cm (line 306) | def test_writer_co_aset_finds_connection_manager_of_any_aset_in_cm(aset_...
  function test_writer_co_aset_cm_not_allow_remove_aset (line 327) | def test_writer_co_aset_cm_not_allow_remove_aset(aset_samples_initialize...
  function test_writer_co_column_instance_cm_not_allow_any_column_removal (line 359) | def test_writer_co_column_instance_cm_not_allow_any_column_removal(repo_...
  function test_writer_co_aset_removes_all_samples_and_arrayset_still_exists (line 423) | def test_writer_co_aset_removes_all_samples_and_arrayset_still_exists(as...
  function test_reader_co_read_single_aset_single_sample (line 452) | def test_reader_co_read_single_aset_single_sample(aset_samples_initializ...
  function test_reader_co_read_single_aset_multiple_samples (line 469) | def test_reader_co_read_single_aset_multiple_samples(aset_samples_initia...
  function test_reader_co_read_multiple_aset_single_samples (line 487) | def test_reader_co_read_multiple_aset_single_samples(aset_samples_initia...
  function test_reader_co_read_multtiple_aset_multiple_samples (line 514) | def test_reader_co_read_multtiple_aset_multiple_samples(aset_samples_ini...
  function test_reader_co_read_fails_nonexistant_aset_name (line 542) | def test_reader_co_read_fails_nonexistant_aset_name(aset_samples_initial...
  function test_reader_co_read_fails_nonexistant_sample_name (line 549) | def test_reader_co_read_fails_nonexistant_sample_name(aset_samples_initi...
  function test_reader_co_get_read_returns_none_nonexistant_sample_name (line 562) | def test_reader_co_get_read_returns_none_nonexistant_sample_name(aset_sa...
  function test_reader_co_read_in_context_manager_no_loop (line 575) | def test_reader_co_read_in_context_manager_no_loop(aset_samples_initiali...
  function test_reader_co_read_in_context_manager_many_samples_looping (line 592) | def test_reader_co_read_in_context_manager_many_samples_looping(aset_sam...

FILE: tests/test_cli.py
  function test_help_option (line 49) | def test_help_option():
  function test_help_no_args_option (line 57) | def test_help_no_args_option():
  function test_version_long_option (line 65) | def test_version_long_option():
  function test_init_repo (line 74) | def test_init_repo(managed_tmpdir):
  function test_writer_lock_is_held_check (line 87) | def test_writer_lock_is_held_check(repo_20_filled_samples2):
  function test_writer_lock_force_release (line 99) | def test_writer_lock_force_release(repo_20_filled_samples2):
  function test_checkout_writer_branch_works (line 115) | def test_checkout_writer_branch_works(repo_20_filled_samples2):
  function test_checkout_writer_branch_nonexistant_branch_errors (line 127) | def test_checkout_writer_branch_nonexistant_branch_errors(repo_20_filled...
  function test_checkout_writer_branch_lock_held_errors (line 138) | def test_checkout_writer_branch_lock_held_errors(repo_20_filled_samples2):
  function test_diff_command (line 157) | def test_diff_command(repo_2_br_no_conf):
  function test_commit_cli_message (line 163) | def test_commit_cli_message(repo_20_filled_samples2):
  function test_commit_cli_message_with_no_changes (line 187) | def test_commit_cli_message_with_no_changes(repo_20_filled_samples2):
  function substitute_editor_commit_message (line 207) | def substitute_editor_commit_message(hint):
  function test_commit_editor_message (line 211) | def test_commit_editor_message(monkeypatch, repo_20_filled_samples2):
  function substitute_editor_empty_commit_message (line 238) | def substitute_editor_empty_commit_message(hint):
  function test_commit_editor_empty_message (line 242) | def test_commit_editor_empty_message(monkeypatch, repo_20_filled_samples2):
  function test_clone (line 265) | def test_clone(written_two_cmt_server_repo):
  function test_push_fetch_records (line 287) | def test_push_fetch_records(server_instance, backend):
  function test_fetch_records_and_data (line 333) | def test_fetch_records_and_data(server_instance, backend, options):
  function test_add_remote (line 383) | def test_add_remote(managed_tmpdir):
  function test_remove_remote (line 404) | def test_remove_remote(managed_tmpdir):
  function test_list_all_remotes (line 430) | def test_list_all_remotes(managed_tmpdir):
  function test_summary (line 463) | def test_summary(written_two_cmt_server_repo, capsys):
  function test_summary_before_commit_made (line 487) | def test_summary_before_commit_made(managed_tmpdir):
  function test_log (line 501) | def test_log(written_two_cmt_server_repo, capsys):
  function test_status (line 525) | def test_status(repo_20_filled_samples2):
  function test_arrayset_create_uint8 (line 544) | def test_arrayset_create_uint8(repo_20_filled_samples2):
  function test_arrayset_create_float32 (line 562) | def test_arrayset_create_float32(repo_20_filled_samples2):
  function test_arrayset_create_invalid_dtype_fails (line 580) | def test_arrayset_create_invalid_dtype_fails(repo_20_filled_samples2):
  function test_arrayset_create_invalid_name_fails (line 597) | def test_arrayset_create_invalid_name_fails(repo_20_filled_samples2):
  function test_arrayset_create_variable_shape (line 612) | def test_arrayset_create_variable_shape(repo_20_filled_samples2):
  function test_arrayset_create_contains_subsamples (line 631) | def test_arrayset_create_contains_subsamples(repo_20_filled_samples2):
  function test_remove_arrayset (line 650) | def test_remove_arrayset(repo_20_filled_samples2):
  function test_remove_non_existing_arrayset (line 663) | def test_remove_non_existing_arrayset(repo_20_filled_samples2):
  function test_branch_create_and_list (line 678) | def test_branch_create_and_list(written_two_cmt_server_repo):
  function test_branch_create_and_delete (line 710) | def test_branch_create_and_delete(written_two_cmt_server_repo):
  function test_start_server (line 765) | def test_start_server(managed_tmpdir):
  function test_db_view_command (line 779) | def test_db_view_command(repo_20_filled_samples):
  function monkeypatch_scan (line 798) | def monkeypatch_scan(provides, accepts, attribute, func):
  function written_repo_with_1_sample (line 810) | def written_repo_with_1_sample(aset_samples_initialized_repo):
  class TestImport (line 823) | class TestImport(object):
    method load (line 826) | def load(fpath, *args, **kwargs):
    method test_import (line 832) | def test_import(self, monkeypatch, written_repo_with_1_sample):
    method test_import_wrong_args (line 870) | def test_import_wrong_args(self, monkeypatch, written_repo_with_1_samp...
    method test_import_generator_on_load (line 909) | def test_import_generator_on_load(self, monkeypatch, written_repo_with...
  class TestExport (line 936) | class TestExport(object):
    method save (line 940) | def save(cls, data, outdir, sampleN, extension, *args, **kwargs):
    method test_export_success (line 945) | def test_export_success(self, monkeypatch, written_repo_with_1_sample,...
    method test_export_wrong_out_location (line 981) | def test_export_wrong_out_location(self, monkeypatch, written_repo_wit...
    method test_export_wrong_arg (line 997) | def test_export_wrong_arg(self, monkeypatch, written_repo_with_1_sampl...
    method test_export_without_specifying_out (line 1009) | def test_export_without_specifying_out(self, monkeypatch, written_repo...
    method test_export_for_non_existent_sample (line 1021) | def test_export_for_non_existent_sample(self, monkeypatch, written_rep...
    method test_export_for_specified_branch (line 1033) | def test_export_for_specified_branch(self, monkeypatch, written_repo_w...
  class TestShow (line 1045) | class TestShow(object):
    method show (line 1049) | def show(cls, fpath, *args, **kwargs):
    method test_show_success (line 1052) | def test_show_success(self, monkeypatch, written_repo_with_1_sample):
    method test_show_on_startpoint (line 1064) | def test_show_on_startpoint(self, monkeypatch, written_repo_with_1_sam...
    method test_show_with_wrong_arg (line 1078) | def test_show_with_wrong_arg(self, monkeypatch, written_repo_with_1_sa...
    method test_wrong_sample_name (line 1090) | def test_wrong_sample_name(self, monkeypatch, written_repo_with_1_samp...

FILE: tests/test_column.py
  function assert_equal (line 7) | def assert_equal(arr, arr2):
  class TestColumn (line 12) | class TestColumn(object):
    method test_invalid_column_name (line 17) | def test_invalid_column_name(self, repo, randomsizedarray, name):
    method test_read_only_mode (line 25) | def test_read_only_mode(self, aset_samples_initialized_repo):
    method test_get_column (line 40) | def test_get_column(self, aset_samples_initialized_repo, array5by7):
    method test_remove_column (line 63) | def test_remove_column(self, aset_backend, aset_samples_initialized_re...
    method test_init_again (line 89) | def test_init_again(self, aset_backend, repo, randomsizedarray):
    method test_column_with_more_dimension (line 97) | def test_column_with_more_dimension(self, aset_backend, repo):
    method test_column_with_empty_dimension (line 112) | def test_column_with_empty_dimension(self, aset_backend, repo):
    method test_column_with_int_specifier_as_dimension (line 130) | def test_column_with_int_specifier_as_dimension(self, aset_backend, re...
    method test_getattr_does_not_raise_permission_error_if_alive (line 150) | def test_getattr_does_not_raise_permission_error_if_alive(self, aset_b...
  class TestDataWithFixedSizedColumn (line 173) | class TestDataWithFixedSizedColumn(object):
    method test_column_remote_references_property_with_none (line 178) | def test_column_remote_references_property_with_none(
    method test_column_remote_references_property_with_remotes (line 198) | def test_column_remote_references_property_with_remotes(
    method test_iterating_over (line 230) | def test_iterating_over(self, aset1_backend, aset2_backend, aset3_back...
    method test_iterating_over_local_only (line 280) | def test_iterating_over_local_only(self, aset1_backend, aset2_backend,...
    method test_get_data (line 363) | def test_get_data(self, aset_samples_initialized_repo, array5by7):
    method test_get_sample_with_default_works (line 372) | def test_get_sample_with_default_works(self, aset_samples_initialized_...
    method test_get_multiple_samples_fails (line 380) | def test_get_multiple_samples_fails(self, aset_samples_initialized_rep...
    method test_getitem_multiple_samples_missing_key (line 399) | def test_getitem_multiple_samples_missing_key(self, aset_samples_initi...
    method test_get_multiple_samples_missing_key (line 413) | def test_get_multiple_samples_missing_key(self, aset_samples_initializ...
    method test_add_data_str_keys (line 425) | def test_add_data_str_keys(self, aset_samples_initialized_repo, array5...
    method test_add_data_int_keys (line 440) | def test_add_data_int_keys(self, aset_samples_initialized_repo, array5...
    method test_cannot_add_data_negative_int_key (line 454) | def test_cannot_add_data_negative_int_key(self, aset_samples_initializ...
    method test_cannot_add_data_float_key (line 462) | def test_cannot_add_data_float_key(self, aset_samples_initialized_repo...
    method test_add_data_mixed_int_str_keys (line 472) | def test_add_data_mixed_int_str_keys(self, aset_samples_initialized_re...
    method test_cannot_add_data_sample_name_longer_than_64_characters (line 492) | def test_cannot_add_data_sample_name_longer_than_64_characters(self, a...
    method test_add_with_wrong_argument_order (line 500) | def test_add_with_wrong_argument_order(self, aset_samples_initialized_...
    method test_update_with_dict_single_item (line 505) | def test_update_with_dict_single_item(self, aset_samples_initialized_w...
    method test_update_with_dict_multiple_items (line 511) | def test_update_with_dict_multiple_items(self, aset_samples_initialize...
    method test_update_with_list_single_item (line 521) | def test_update_with_list_single_item(self, aset_samples_initialized_w...
    method test_update_with_list_multiple_items (line 531) | def test_update_with_list_multiple_items(self, aset_samples_initialize...
    method test_update_with_only_kwargs_single_item (line 541) | def test_update_with_only_kwargs_single_item(self, aset_samples_initia...
    method test_update_with_only_kwargs_multiple_items (line 546) | def test_update_with_only_kwargs_multiple_items(self, aset_samples_ini...
    method test_update_with_list_and_kwargs (line 552) | def test_update_with_list_and_kwargs(self, aset_samples_initialized_w_...
    method test_update_with_dict_and_kwargs (line 563) | def test_update_with_dict_and_kwargs(self, aset_samples_initialized_w_...
    method test_update_with_dict_and_kwargs_does_not_modify_input_in_calling_scopy (line 574) | def test_update_with_dict_and_kwargs_does_not_modify_input_in_calling_...
    method test_update_with_invalid_data_map_fails (line 609) | def test_update_with_invalid_data_map_fails(self, aset_samples_initial...
    method test_setitem_with_invalid_data_map_fails (line 626) | def test_setitem_with_invalid_data_map_fails(self, aset_samples_initia...
    method test_add_multiple_data_single_commit (line 631) | def test_add_multiple_data_single_commit(self, aset_samples_initialize...
    method test_add_same_data_same_key_does_not_duplicate_hash (line 646) | def test_add_same_data_same_key_does_not_duplicate_hash(self, aset_sam...
    method test_multiple_data_multiple_commit (line 658) | def test_multiple_data_multiple_commit(self, aset_samples_initialized_...
    method test_added_but_not_commited (line 679) | def test_added_but_not_commited(self, aset_samples_initialized_repo, a...
    method test_remove_data (line 693) | def test_remove_data(self, aset_samples_initialized_repo, array5by7):
    method test_remove_data_multiple_items (line 723) | def test_remove_data_multiple_items(self, aset_samples_initialized_rep...
    method test_pop_data (line 757) | def test_pop_data(self, aset_samples_initialized_repo, array5by7):
    method test_pop_data_multiple_items (line 792) | def test_pop_data_multiple_items(self, aset_samples_initialized_repo, ...
    method test_remove_all_data (line 826) | def test_remove_all_data(self, aset_samples_initialized_repo, array5by7):
    method test_remove_data_nonexistant_sample_key_raises (line 869) | def test_remove_data_nonexistant_sample_key_raises(self, aset_samples_...
    method test_multiple_columns_single_commit (line 882) | def test_multiple_columns_single_commit(
    method test_prototype_and_shape (line 899) | def test_prototype_and_shape(self, aset1_backend, aset2_backend, repo,...
    method test_samples_without_name (line 915) | def test_samples_without_name(self, repo, randomsizedarray):
    method test_append_samples (line 927) | def test_append_samples(self, repo, randomsizedarray):
    method test_different_data_types_and_shapes (line 940) | def test_different_data_types_and_shapes(self, repo):
    method test_add_sample_with_non_numpy_array_data_fails (line 959) | def test_add_sample_with_non_numpy_array_data_fails(self, aset_samples...
    method test_add_sample_with_fortran_order_data_fails (line 965) | def test_add_sample_with_fortran_order_data_fails(self, aset_samples_i...
    method test_add_sample_with_dimension_rank_fails (line 971) | def test_add_sample_with_dimension_rank_fails(self, repo):
    method test_add_sample_with_dimension_exceeding_max_fails (line 979) | def test_add_sample_with_dimension_exceeding_max_fails(self, repo):
    method test_writer_context_manager_column_add_sample (line 988) | def test_writer_context_manager_column_add_sample(self, aset_backend, ...
    method test_column_context_manager_aset_sample_add (line 1000) | def test_column_context_manager_aset_sample_add(self, aset_backend, re...
    method test_writer_column_properties_are_correct (line 1014) | def test_writer_column_properties_are_correct(self, aset_samples_initi...
    method test_reader_column_properties_are_correct (line 1031) | def test_reader_column_properties_are_correct(self, aset_samples_initi...
    method test_iter_column_samples_yields_keys (line 1047) | def test_iter_column_samples_yields_keys(self, aset_samples_initialize...
    method test_iter_columns_yields_aset_names (line 1059) | def test_iter_columns_yields_aset_names(self, repo_20_filled_samples):
    method test_set_item_column_fails (line 1065) | def test_set_item_column_fails(self, aset_samples_initialized_repo):
  class TestVariableSizedColumn (line 1072) | class TestVariableSizedColumn(object):
    method test_write_all_zeros_same_size_different_shape_does_not_store_as_identical_hashs (line 1083) | def test_write_all_zeros_same_size_different_shape_does_not_store_as_i...
    method test_writer_can_create_variable_size_column (line 1153) | def test_writer_can_create_variable_size_column(
    method test_reader_recieves_expected_values_for_variable_size_column (line 1185) | def test_reader_recieves_expected_values_for_variable_size_column(
    method test_writer_reader_can_create_read_multiple_variable_size_column (line 1221) | def test_writer_reader_can_create_read_multiple_variable_size_column(
    method test_writer_column_properties_are_correct (line 1254) | def test_writer_column_properties_are_correct(self, aset_samples_var_s...
    method test_reader_column_properties_are_correct (line 1269) | def test_reader_column_properties_are_correct(self, aset_samples_var_s...
  class TestMultiprocessColumnReads (line 1285) | class TestMultiprocessColumnReads(object):
    method test_external_multi_process_pool (line 1288) | def test_external_multi_process_pool(self, repo, backend):
    method test_external_multi_process_pool_fails_on_write_enabled_checkout (line 1323) | def test_external_multi_process_pool_fails_on_write_enabled_checkout(s...
    method test_multiprocess_get_succeeds_on_superset_and_subset_of_keys (line 1345) | def test_multiprocess_get_succeeds_on_superset_and_subset_of_keys(self...
    method test_writer_iterating_over_keys_can_have_additions_made_no_error (line 1381) | def test_writer_iterating_over_keys_can_have_additions_made_no_error(s...
    method test_writer_iterating_over_values_can_have_additions_made_no_error (line 1401) | def test_writer_iterating_over_values_can_have_additions_made_no_error...
    method test_writer_iterating_over_items_can_have_additions_made_no_error (line 1422) | def test_writer_iterating_over_items_can_have_additions_made_no_error(...
    method test_reader_iterating_over_items_can_not_make_additions (line 1445) | def test_reader_iterating_over_items_can_not_make_additions(self, two_...

FILE: tests/test_column_backends.py
  function test_backend_property_reports_correct_backend (line 7) | def test_backend_property_reports_correct_backend(repo, array5by7, backe...
  function test_setting_backend_property_cannot_change_backend (line 23) | def test_setting_backend_property_cannot_change_backend(repo, array5by7,...
  function test_setting_backend_opts_property_cannot_change_backend_opts (line 44) | def test_setting_backend_opts_property_cannot_change_backend_opts(repo, ...
  function test_heuristics_select_backend (line 80) | def test_heuristics_select_backend(repo, shape, dtype, variable_shape, e...
  function test_manual_override_heuristics_select_backend (line 111) | def test_manual_override_heuristics_select_backend(repo, prototype, back...
  function test_manual_override_heuristics_invalid_value_raises_error (line 139) | def test_manual_override_heuristics_invalid_value_raises_error(repo):
  function test_manual_change_backends_after_write_works (line 150) | def test_manual_change_backends_after_write_works(repo, array5by7, backe...
  function test_manual_change_backend_to_invalid_fmt_code_fails (line 196) | def test_manual_change_backend_to_invalid_fmt_code_fails(repo, array5by7...
  function test_manual_change_backend_fails_while_in_cm (line 239) | def test_manual_change_backend_fails_while_in_cm(repo, array5by7, backen...
  function dummy_writer_checkout (line 297) | def dummy_writer_checkout(classrepo):
  class TestComplibRestrictions (line 303) | class TestComplibRestrictions:
    method test_schema_smaller_16_bytes_cannot_select_blosc_backend (line 317) | def test_schema_smaller_16_bytes_cannot_select_blosc_backend(
  function test_schema_smaller_16_bytes_does_not_use_heuristic_to_select_blosc (line 346) | def test_schema_smaller_16_bytes_does_not_use_heuristic_to_select_blosc(
  function test_schema_smaller_16_bytes_cannot_change_to_blosc_backend (line 375) | def test_schema_smaller_16_bytes_cannot_change_to_blosc_backend(

FILE: tests/test_column_definition_permutations.py
  function assert_equal (line 10) | def assert_equal(expected, actual):
  function ndarray_generate_data_fixed_shape (line 20) | def ndarray_generate_data_fixed_shape(shape, dtype, low=0, high=255):
  function ndarray_generate_data_variable_shape (line 25) | def ndarray_generate_data_variable_shape(shape, dtype, low=0, high=255):
  function str_generate_data_variable_shape (line 36) | def str_generate_data_variable_shape(
  function bytes_generate_data_variable_shape (line 44) | def bytes_generate_data_variable_shape(
  function add_data_to_column (line 88) | def add_data_to_column(col, data_gen, nsamples, nsubsamples=None):
  function num_samples_gen (line 105) | def num_samples_gen(request):
  function num_subsamples_gen (line 110) | def num_subsamples_gen(request):
  function column_permutation_repo (line 115) | def column_permutation_repo(repo, num_samples_gen, num_subsamples_gen):
  function column_permutations_read_write_checkout (line 172) | def column_permutations_read_write_checkout(request, column_permutation_...
  function column_permutations_write_checkout (line 180) | def column_permutations_write_checkout(column_permutation_repo):
  function test_cannot_create_column_within_cm (line 193) | def test_cannot_create_column_within_cm(repo, column_type, column_kwargs...
  function test_contains_subsamples_non_bool_value_fails (line 216) | def test_contains_subsamples_non_bool_value_fails(repo, column_type, col...
  function test_cannot_create_column_name_exists (line 239) | def test_cannot_create_column_name_exists(repo, column_type, column_kwar...
  function test_read_data_from_column_permutations (line 268) | def test_read_data_from_column_permutations(column_permutations_read_wri...
  function test_write_data_to_column_permutations (line 289) | def test_write_data_to_column_permutations(
  function test_merge_write_data_to_column_permutations (line 330) | def test_merge_write_data_to_column_permutations(

FILE: tests/test_column_nested.py
  function assert_equal (line 11) | def assert_equal(arr, arr2):
  class TestArraysetSetup (line 19) | class TestArraysetSetup:
    method test_does_not_allow_invalid_arrayset_names (line 24) | def test_does_not_allow_invalid_arrayset_names(self, repo, randomsized...
    method test_read_only_mode_arrayset_methods_limited (line 30) | def test_read_only_mode_arrayset_methods_limited(self, aset_subsamples...
    method test_get_arrayset_in_read_and_write_checkouts (line 43) | def test_get_arrayset_in_read_and_write_checkouts(self, aset_subsample...
    method test_delete_arrayset (line 61) | def test_delete_arrayset(self, aset_backend, aset_subsamples_initializ...
    method test_init_same_arrayset_twice_fails_again (line 95) | def test_init_same_arrayset_twice_fails_again(self, aset_backend, repo...
    method test_arrayset_with_invalid_dimension_sizes_shapes (line 110) | def test_arrayset_with_invalid_dimension_sizes_shapes(self, aset_backe...
  function multi_item_generator (line 135) | def multi_item_generator(request):
  function iterable_subsamples (line 145) | def iterable_subsamples(request, multi_item_generator):
  function iterable_samples (line 186) | def iterable_samples(request, multi_item_generator, iterable_subsamples):
  function backend_params (line 209) | def backend_params(request):
  function subsample_writer_written_aset (line 214) | def subsample_writer_written_aset(backend_params, repo, monkeypatch):
  class TestAddData (line 231) | class TestAddData:
    method test_update_sample_subsamples_empty_arrayset (line 233) | def test_update_sample_subsamples_empty_arrayset(self, subsample_write...
    method test_update_sample_kwargs_only_empty_arrayset (line 241) | def test_update_sample_kwargs_only_empty_arrayset(self, subsample_writ...
    method test_update_sample_kwargs_and_other_dict_doesnt_modify_input_in_calling_scope (line 258) | def test_update_sample_kwargs_and_other_dict_doesnt_modify_input_in_ca...
    method test_update_sample_kwargs_and_iterably_empty_arrayset (line 280) | def test_update_sample_kwargs_and_iterably_empty_arrayset(
    method test_update_sample_subsamples_duplicate_data_does_not_save_new (line 291) | def test_update_sample_subsamples_duplicate_data_does_not_save_new(
    method test_update_sample_subsamples_context_manager (line 306) | def test_update_sample_subsamples_context_manager(self, subsample_writ...
    method test_setitem_sample_subsamples_empty_arrayset (line 319) | def test_setitem_sample_subsamples_empty_arrayset(
    method test_setitem_sample_subsamples_contextmanager (line 334) | def test_setitem_sample_subsamples_contextmanager(
    method test_update_subsamples_empty_arrayset (line 354) | def test_update_subsamples_empty_arrayset(self, multi_item_generator, ...
    method test_update_subsamples_via_kwargs_empty_arrayset (line 369) | def test_update_subsamples_via_kwargs_empty_arrayset(self, multi_item_...
    method test_update_subsamples_kwargs_and_other_dict_doesnt_modify_input_in_calling_scopy (line 382) | def test_update_subsamples_kwargs_and_other_dict_doesnt_modify_input_i...
    method test_update_subsamples_via_kwargs_and_iterable_empty_arrayset (line 408) | def test_update_subsamples_via_kwargs_and_iterable_empty_arrayset(
    method test_update_subsamples_context_manager (line 425) | def test_update_subsamples_context_manager(
    method test_setitem_sample_empty_arrayset (line 450) | def test_setitem_sample_empty_arrayset(
    method test_setitem_sample_setitem_subsample_empty_arrayset_fails (line 469) | def test_setitem_sample_setitem_subsample_empty_arrayset_fails(self, s...
    method test_setitem_subsamples_contextmanager (line 484) | def test_setitem_subsamples_contextmanager(self, multi_item_generator,...
    method test_append_subsamples_empty_arrayset (line 506) | def test_append_subsamples_empty_arrayset(self, multi_item_generator, ...
    method test_append_subsamples_contextmanager (line 519) | def test_append_subsamples_contextmanager(self, multi_item_generator, ...
    method test_update_noniterable_subsample_iter_fails (line 540) | def test_update_noniterable_subsample_iter_fails(self, backend, other,...
    method test_update_subsamples_with_too_many_arguments_fails (line 554) | def test_update_subsamples_with_too_many_arguments_fails(self, backend...
    method test_update_subsamples_with_too_few_arguments_fails (line 568) | def test_update_subsamples_with_too_few_arguments_fails(self, backend,...
    method test_update_noniterable_samples_fails (line 597) | def test_update_noniterable_samples_fails(self, other, subsample_write...
    method test_update_noniterable_subsamples_fails (line 613) | def test_update_noniterable_subsamples_fails(self, other, subsample_wr...
    method test_update_invalid_sample_key_fails (line 629) | def test_update_invalid_sample_key_fails(self, other, subsample_writer...
    method test_update_sample_invalid_subsample_key_fails (line 645) | def test_update_sample_invalid_subsample_key_fails(self, other, subsam...
    method test_update_sample_invalid_array_fails_fixed_shape (line 662) | def test_update_sample_invalid_array_fails_fixed_shape(self, backend, ...
    method test_update_subsample_invalid_subsample_key_fails (line 682) | def test_update_subsample_invalid_subsample_key_fails(self, other, sub...
    method test_update_subsample_invalid_array_fails_fixed_shape (line 701) | def test_update_subsample_invalid_array_fails_fixed_shape(self, backen...
  function subsample_data_map (line 719) | def subsample_data_map():
  function backend_param (line 736) | def backend_param(request):
  function write_enabled (line 741) | def write_enabled(request):
  function initialized_arrayset (line 746) | def initialized_arrayset(write_enabled, backend_param, classrepo, subsam...
  function initialized_arrayset_write_only (line 765) | def initialized_arrayset_write_only(backend_param, repo, subsample_data_...
  class TestRemoveData (line 774) | class TestRemoveData:
    method test_delitem_single_sample_from_arrayset (line 778) | def test_delitem_single_sample_from_arrayset(self, initialized_arrayse...
    method test_delitem_single_subsample_from_sample (line 784) | def test_delitem_single_subsample_from_sample(self, initialized_arrays...
    method test_delitem_sample_nonexisting_keys_fails (line 790) | def test_delitem_sample_nonexisting_keys_fails(self, initialized_array...
    method test_delitem_single_subsample_nonexisting_key_fails (line 797) | def test_delitem_single_subsample_nonexisting_key_fails(self, initiali...
    method test_delitem_multiple_samples_fails_keyerror (line 806) | def test_delitem_multiple_samples_fails_keyerror(self, initialized_arr...
    method test_pop_single_sample_from_arrayset (line 815) | def test_pop_single_sample_from_arrayset(self, initialized_arrayset_wr...
    method test_pop_multiple_samples_from_arrayset_fails (line 824) | def test_pop_multiple_samples_from_arrayset_fails(self, initialized_ar...
    method test_pop_single_subsample_from_sample (line 831) | def test_pop_single_subsample_from_sample(self, initialized_arrayset_w...
    method test_pop_multiple_subsample_from_sample_fails (line 838) | def test_pop_multiple_subsample_from_sample_fails(self, initialized_ar...
  class TestContainerIntrospection (line 849) | class TestContainerIntrospection:
    method test_get_sample_returns_object (line 851) | def test_get_sample_returns_object(self, initialized_arrayset, subsamp...
    method test_get_sample_test_subsample_len_method (line 862) | def test_get_sample_test_subsample_len_method(self, initialized_arrays...
    method test_get_sample_test_subsample_contains_method (line 868) | def test_get_sample_test_subsample_contains_method(self, initialized_a...
    method test_sample_len_reported_correctly (line 875) | def test_sample_len_reported_correctly(self, initialized_arrayset, sub...
    method test_get_sample_test_subsample_sample_property (line 882) | def test_get_sample_test_subsample_sample_property(self, initialized_a...
    method test_get_sample_test_subsample_arrayset_property (line 888) | def test_get_sample_test_subsample_arrayset_property(self, initialized...
    method test_get_sample_test_data_property (line 894) | def test_get_sample_test_data_property(self, initialized_arrayset, sub...
    method test_get_sample_test_subsample_contains_remote_references_property (line 904) | def test_get_sample_test_subsample_contains_remote_references_property(
    method test_get_sample_test_subsample_remote_reference_keys_property (line 929) | def test_get_sample_test_subsample_remote_reference_keys_property(self...
    method test_getattr_does_not_raise_permission_error_if_alive (line 952) | def test_getattr_does_not_raise_permission_error_if_alive(self, initia...
  class TestGetDataMethods (line 988) | class TestGetDataMethods:
    method test_get_sample_missing_key (line 990) | def test_get_sample_missing_key(self, initialized_arrayset):
    method test_getitem_sample_missing_key (line 997) | def test_getitem_sample_missing_key(self, initialized_arrayset):
    method test_get_sample_get_subsample (line 1002) | def test_get_sample_get_subsample(self, initialized_arrayset, subsampl...
    method test_getitem_sample_getitem_subsample (line 1010) | def test_getitem_sample_getitem_subsample(self, initialized_arrayset, ...
    method test_getitem_subsample_from_column (line 1021) | def test_getitem_subsample_from_column(self, initialized_arrayset, sub...
    method test_recursive_subsample_getitem_from_column (line 1034) | def test_recursive_subsample_getitem_from_column(self, initialized_arr...
    method test_get_subsample_from_column (line 1041) | def test_get_subsample_from_column(self, initialized_arrayset, subsamp...
    method test_get_sample_get_subsample_missing_key (line 1054) | def test_get_sample_get_subsample_missing_key(self, initialized_arrays...
    method test_getitem_sample_getitem_subsample_missing_key (line 1071) | def test_getitem_sample_getitem_subsample_missing_key(self, initialize...
    method test_get_sample_get_multiple_subsamples_fails (line 1078) | def test_get_sample_get_multiple_subsamples_fails(self, initialized_ar...
    method test_get_sample_getitem_single_subsample (line 1085) | def test_get_sample_getitem_single_subsample(self, initialized_arrayse...
    method test_get_sample_getitem_single_subsample_missing_key (line 1093) | def test_get_sample_getitem_single_subsample_missing_key(self, initial...
    method test_get_sample_getitem_multiple_subsamples_fails (line 1102) | def test_get_sample_getitem_multiple_subsamples_fails(self, initialize...
    method test_get_sample_getitem_subsamples_with_ellipsis (line 1109) | def test_get_sample_getitem_subsamples_with_ellipsis(self, initialized...
    method test_get_sample_getitem_subsamples_with_keys_and_ellipsis_fails (line 1119) | def test_get_sample_getitem_subsamples_with_keys_and_ellipsis_fails(se...
    method test_get_sample_getitem_subsamples_with_unbound_slice (line 1129) | def test_get_sample_getitem_subsamples_with_unbound_slice(self, initia...
    method test_get_sample_getitem_subsamples_with_bounded_slice (line 1140) | def test_get_sample_getitem_subsamples_with_bounded_slice(self, initia...
    method test_subsample_getitem_with_bounded_slice_from_column (line 1150) | def test_subsample_getitem_with_bounded_slice_from_column(self, initia...
    method test_get_sample_getitem_subsamples_with_out_of_bounds_slice_does_not_fail (line 1159) | def test_get_sample_getitem_subsamples_with_out_of_bounds_slice_does_n...
    method test_aset_contextmanager (line 1176) | def test_aset_contextmanager(self, initialized_arrayset, subsample_dat...
    method test_sample_contextmanager (line 1190) | def test_sample_contextmanager(self, initialized_arrayset, subsample_d...
    method test_sample_subsample_contextmanager (line 1205) | def test_sample_subsample_contextmanager(self, initialized_arrayset, s...
    method test_sample_reentrant_contextmanager_fails (line 1231) | def test_sample_reentrant_contextmanager_fails(self, initialized_array...
    method test_calling_iter_on_arrayset (line 1270) | def test_calling_iter_on_arrayset(self, initialized_arrayset, subsampl...
    method test_calling_iter_on_sample_in_arrayset (line 1277) | def test_calling_iter_on_sample_in_arrayset(self, initialized_arrayset...
    method test_get_sample_keys_method (line 1289) | def test_get_sample_keys_method(self, initialized_arrayset):
    method test_get_sample_keys_method_local_only (line 1298) | def test_get_sample_keys_method_local_only(self, initialized_arrayset):
    method test_get_sample_subsample_keys_method (line 1315) | def test_get_sample_subsample_keys_method(self, initialized_arrayset, ...
    method test_get_sample_subsample_keys_method_local_only (line 1326) | def test_get_sample_subsample_keys_method_local_only(self, initialized...
    method test_get_sample_values_method (line 1359) | def test_get_sample_values_method(self, initialized_arrayset):
    method test_get_sample_values_method_local_only (line 1371) | def test_get_sample_values_method_local_only(self, initialized_arrayset):
    method test_get_sample_subsample_values_method (line 1390) | def test_get_sample_subsample_values_method(self, initialized_arrayset...
    method test_get_sample_subsample_values_method_local_only (line 1401) | def test_get_sample_subsample_values_method_local_only(self, initializ...
    method test_get_sample_items_method (line 1434) | def test_get_sample_items_method(self, initialized_arrayset):
    method test_get_sample_items_method_local_only (line 1447) | def test_get_sample_items_method_local_only(self, initialized_arrayset):
    method test_get_sample_subsample_items_method (line 1467) | def test_get_sample_subsample_items_method(self, initialized_arrayset,...
    method test_get_sample_subsample_items_method_local_only (line 1478) | def test_get_sample_subsample_items_method_local_only(self, initialize...
    method test_arrayset_remote_references_property_with_none (line 1514) | def test_arrayset_remote_references_property_with_none(
    method test_arrayset_remote_references_property_with_remotes (line 1536) | def test_arrayset_remote_references_property_with_remotes(
  class TestWriteThenReadCheckout (line 1568) | class TestWriteThenReadCheckout:
    method test_add_data_commit_checkout_read_only_contains_same (line 1571) | def test_add_data_commit_checkout_read_only_contains_same(self, backen...

FILE: tests/test_column_pickle.py
  function assert_equal (line 6) | def assert_equal(arr, arr2):
  function subsample_data_map (line 13) | def subsample_data_map():
  function sample_data_map (line 30) | def sample_data_map():
  function backend_param (line 43) | def backend_param(request):
  function write_enabled (line 48) | def write_enabled(request):
  function contains_subsamples (line 53) | def contains_subsamples(request):
  function initialized_column (line 58) | def initialized_column(
  function initialized_column_read_only (line 82) | def initialized_column_read_only(backend_param, contains_subsamples, cla...
  class TestPickleableColumns (line 99) | class TestPickleableColumns:
    method test_is_pickleable (line 101) | def test_is_pickleable(self, initialized_column, sample_data_map, subs...
  class TestLoadableColumns (line 113) | class TestLoadableColumns:
    method test_is_pickle_is_loadable (line 115) | def test_is_pickle_is_loadable(self, initialized_column_read_only, sam...

FILE: tests/test_commit_ref_verification.py
  function test_verify_corruption_in_commit_ref_alerts (line 4) | def test_verify_corruption_in_commit_ref_alerts(two_commit_filled_sample...
  function test_verify_corruption_in_commit_parent_val_alerts (line 35) | def test_verify_corruption_in_commit_parent_val_alerts(two_commit_filled...
  function test_verify_corruption_in_spec_val_alerts (line 65) | def test_verify_corruption_in_spec_val_alerts(two_commit_filled_samples_...

FILE: tests/test_context_management.py
  function test_nested_context_manager_does_not_close_all_open (line 11) | def test_nested_context_manager_does_not_close_all_open(repo, backend1, ...

FILE: tests/test_diff.py
  class TestReaderWriterDiff (line 5) | class TestReaderWriterDiff(object):
    method test_diff_by_commit_and_branch (line 8) | def test_diff_by_commit_and_branch(self, repo_2_br_no_conf, writer):
    method test_diff_with_wrong_commit_hash (line 19) | def test_diff_with_wrong_commit_hash(self, repo_2_br_no_conf, writer):
    method test_diff_with_wrong_branch_name (line 30) | def test_diff_with_wrong_branch_name(self, repo_1_br_no_conf, writer):
    method test_comparing_diffs_of_dev_and_master (line 38) | def test_comparing_diffs_of_dev_and_master(self, repo_1_br_no_conf, wr...
    method test_diff_data_samples (line 64) | def test_diff_data_samples(self, repo_1_br_no_conf, writer):
    method test_sample_addition_conflict (line 98) | def test_sample_addition_conflict(self, repo_1_br_no_conf, writer):
    method test_sample_removal_conflict (line 126) | def test_sample_removal_conflict(self, repo_1_br_no_conf, writer):
    method test_sample_mutation_conflict (line 154) | def test_sample_mutation_conflict(self, repo_1_br_no_conf, writer):
    method test_aset_addition_conflict (line 178) | def test_aset_addition_conflict(self, aset_samples_initialized_repo, w...
    method test_aset_removal_conflict (line 201) | def test_aset_removal_conflict(self, aset_samples_initialized_repo, wr...
    method test_aset_mutation_conflict (line 234) | def test_aset_mutation_conflict(self, aset_samples_initialized_repo, w...
    method test_commits_inside_cm (line 263) | def test_commits_inside_cm(self, aset_samples_initialized_repo, array5...
  class TestWriterDiff (line 289) | class TestWriterDiff(object):
    method test_status_and_staged_column (line 291) | def test_status_and_staged_column(self, aset_samples_initialized_repo):
    method test_status_and_staged_samples (line 301) | def test_status_and_staged_samples(self, aset_samples_initialized_repo):
    method test_status_and_staged_aset (line 322) | def test_status_and_staged_aset(self, aset_samples_initialized_repo):
  function test_repo_diff_method_branch_names (line 334) | def test_repo_diff_method_branch_names(aset_samples_initialized_repo):
  function test_repo_diff_method_commit_digests (line 363) | def test_repo_diff_method_commit_digests(aset_samples_initialized_repo):
  function test_repo_diff_method_one_branch_one_commit_digest (line 394) | def test_repo_diff_method_one_branch_one_commit_digest(aset_samples_init...

FILE: tests/test_diff_staged_summary.py
  function test_add_samples_to_existing_column (line 5) | def test_add_samples_to_existing_column(repo_20_filled_samples2):
  function test_mutate_sample_values (line 44) | def test_mutate_sample_values(repo_20_filled_samples2):
  function test_delete_samples (line 83) | def test_delete_samples(repo_20_filled_samples2):
  function test_add_new_column_schema_and_samples (line 120) | def test_add_new_column_schema_and_samples(repo_20_filled_samples2):
  function test_add_new_column_schema_and_sample_and_delete_old_column (line 172) | def test_add_new_column_schema_and_sample_and_delete_old_column(repo_20_...
  function test_add_new_schema_and_samples_and_change_old_backend (line 237) | def test_add_new_schema_and_samples_and_change_old_backend(repo_20_fille...

FILE: tests/test_initiate.py
  function test_imports (line 6) | def test_imports():
  function test_starting_up_repo_warns_should_exist_no_args (line 11) | def test_starting_up_repo_warns_should_exist_no_args(managed_tmpdir):
  function test_starting_up_repo_warns_should_exist_manual_args (line 24) | def test_starting_up_repo_warns_should_exist_manual_args(managed_tmpdir):
  function test_starting_up_repo_does_not_warn_not_exist_manual_args (line 37) | def test_starting_up_repo_does_not_warn_not_exist_manual_args(managed_tm...
  function test_initial_read_checkout (line 52) | def test_initial_read_checkout(managed_tmpdir):
  function test_initial_arrayset (line 60) | def test_initial_arrayset(managed_tmpdir, randomsizedarray):
  function test_empty_commit (line 74) | def test_empty_commit(managed_tmpdir, caplog):
  function test_cannot_operate_without_repo_init (line 84) | def test_cannot_operate_without_repo_init(managed_tmpdir):
  function test_check_repo_size (line 137) | def test_check_repo_size(repo_20_filled_samples):
  function test_force_release_writer_lock (line 149) | def test_force_release_writer_lock(managed_tmpdir, monkeypatch):
  function test_force_release_writer_lock_works (line 172) | def test_force_release_writer_lock_works(managed_tmpdir):
  function test_repo_summary_does_not_error_before_any_commit_made (line 187) | def test_repo_summary_does_not_error_before_any_commit_made(capfd, manag...
  function test_get_ecosystem_details (line 197) | def test_get_ecosystem_details(managed_tmpdir):
  function test_inject_repo_version (line 209) | def test_inject_repo_version(monkeypatch):
  function test_check_repository_version (line 215) | def test_check_repository_version(aset_samples_initialized_repo):
  function test_check_repository_software_version_startup (line 223) | def test_check_repository_software_version_startup(managed_tmpdir):
  function test_check_repository_software_version_fails_hangar_version (line 254) | def test_check_repository_software_version_fails_hangar_version(monkeypa...
  function test_check_repository_software_version_works_on_newer_hangar_version (line 277) | def test_check_repository_software_version_works_on_newer_hangar_version...

FILE: tests/test_merging.py
  function test_merge_fails_with_invalid_branch_name (line 5) | def test_merge_fails_with_invalid_branch_name(repo_1_br_no_conf):
  function test_is_ff_merge (line 13) | def test_is_ff_merge(repo_1_br_no_conf):
  function test_writer_checkout_ff_merge (line 19) | def test_writer_checkout_ff_merge(repo_1_br_no_conf):
  function test_merge_fails_if_changes_staged (line 34) | def test_merge_fails_if_changes_staged(repo_1_br_no_conf):
  function test_writer_checkout_merge_fails_if_changes_staged (line 43) | def test_writer_checkout_merge_fails_if_changes_staged(repo_1_br_no_conf):
  function test_ff_merge_no_conf_correct_contents_for_name_or_hash_checkout (line 52) | def test_ff_merge_no_conf_correct_contents_for_name_or_hash_checkout(rep...
  function test_ff_merge_no_conf_updates_head_commit_of_branches (line 69) | def test_ff_merge_no_conf_updates_head_commit_of_branches(repo_1_br_no_c...
  function test_is_3_way_merge (line 87) | def test_is_3_way_merge(repo_2_br_no_conf):
  function test_writer_checkout_is_3_way_merge (line 95) | def test_writer_checkout_is_3_way_merge(repo_2_br_no_conf):
  function test_3_way_merge_no_conflict_correct_contents (line 105) | def test_3_way_merge_no_conflict_correct_contents(repo_2_br_no_conf):
  function test_writer_checkout_3_way_merge_no_conflict_correct_contents (line 130) | def test_writer_checkout_3_way_merge_no_conflict_correct_contents(repo_2...
  function test_3_way_merge_no_conflict_and_mutation_correct_contents (line 156) | def test_3_way_merge_no_conflict_and_mutation_correct_contents(repo_2_br...
  function test_3_way_merge_updates_head_commit_of_branches (line 197) | def test_3_way_merge_updates_head_commit_of_branches(repo_2_br_no_conf):
  function test_writer_checkout_3_way_merge_updates_head_commit_of_branches (line 211) | def test_writer_checkout_3_way_merge_updates_head_commit_of_branches(rep...
  class TestArraysetSampleConflicts (line 227) | class TestArraysetSampleConflicts(object):
    method test_conflict_additions_same_str_name_different_value (line 229) | def test_conflict_additions_same_str_name_different_value(self, repo_2...
    method test_conflict_additions_same_int_name_different_value (line 242) | def test_conflict_additions_same_int_name_different_value(self, repo_2...
    method test_conflict_additions_same_str_and_int_name_different_value (line 255) | def test_conflict_additions_same_str_and_int_name_different_value(self...
    method test_no_conflict_additions_same_name_and_value (line 269) | def test_no_conflict_additions_same_name_and_value(self, repo_2_br_no_...
    method test_conflict_mutations_same_name_different_value (line 287) | def test_conflict_mutations_same_name_different_value(self, repo_2_br_...
    method test_conflict_mutation_and_removal (line 304) | def test_conflict_mutation_and_removal(self, repo_2_br_no_conf):
    method test_no_conflict_both_removal (line 320) | def test_no_conflict_both_removal(self, repo_2_br_no_conf):

FILE: tests/test_optimized_utils.py
  function test_sizeddict_maxsize_property (line 6) | def test_sizeddict_maxsize_property():
  function test_sizeddict_setitem_no_overflow_retains_keys_and_len (line 13) | def test_sizeddict_setitem_no_overflow_retains_keys_and_len():
  function test_sizeddict_setitem_overflow_truncates_keys_and_len (line 24) | def test_sizeddict_setitem_overflow_truncates_keys_and_len():
  function test_sizeddict_update_no_overflow_retains_keys_and_len (line 39) | def test_sizeddict_update_no_overflow_retains_keys_and_len():
  function test_sizeddict_updateoverflow_truncates_keys_and_len (line 50) | def test_sizeddict_updateoverflow_truncates_keys_and_len():
  function test_sizeddict_get_returns_default_on_missing_key (line 65) | def test_sizeddict_get_returns_default_on_missing_key():
  function test_sizeddict_delitem (line 73) | def test_sizeddict_delitem():
  function test_sizeddict_pop (line 87) | def test_sizeddict_pop():
  function test_sizeddict_popitem (line 100) | def test_sizeddict_popitem():
  function test_sizeddict_keys (line 119) | def test_sizeddict_keys():
  function test_sizeddict_values (line 129) | def test_sizeddict_values():
  function test_sizeddict_keys (line 139) | def test_sizeddict_keys():
  function test_sizeddict_setdefault (line 149) | def test_sizeddict_setdefault():
  function test_sizeddict_clear (line 173) | def test_sizeddict_clear():
  function test_sizeddict_repr (line 187) | def test_sizeddict_repr():
  function test_sizeddict_is_pickleable (line 197) | def test_sizeddict_is_pickleable():

FILE: tests/test_remote_serialize.py
  function assert_array_equal (line 12) | def assert_array_equal(arr, arr2):
  function arr_shape (line 18) | def arr_shape(request):
  function arr_dtype (line 22) | def arr_dtype(request):
  function ident_digest (line 26) | def ident_digest(request):
  function ident_schema (line 30) | def ident_schema(request):
  function array_testcase (line 35) | def array_testcase(arr_shape, arr_dtype):
  function str_testcase (line 45) | def str_testcase(request):
  function bytes_testcase (line 53) | def bytes_testcase(request):
  function ident_testcase (line 58) | def ident_testcase(ident_digest, ident_schema):
  function test_serialize_deserialize_array (line 62) | def test_serialize_deserialize_array(array_testcase):
  function test_serialize_deserialize_str (line 71) | def test_serialize_deserialize_str(str_testcase):
  function test_serialize_deserialize_bytes (line 78) | def test_serialize_deserialize_bytes(bytes_testcase):
  function test_serialize_deserialize_data (line 90) | def test_serialize_deserialize_data(expected_dtype_code, data):
  function test_serialize_deserialize_ident (line 104) | def test_serialize_deserialize_ident(ident_testcase):
  function test_serialize_deserialize_record (line 117) | def test_serialize_deserialize_record(array_testcase, ident_testcase):
  function test_serialize_deserialize_record_pack (line 132) | def test_serialize_deserialize_record_pack(ident_testcase, nrecords):
  function test_serialize_deserialize_ident_digest_field_only (line 166) | def test_serialize_deserialize_ident_digest_field_only(ident_testcase):
  function test_serialize_deserialize_ident_schema_field_only (line 179) | def test_serialize_deserialize_ident_schema_field_only(ident_testcase):
  function test_serialize_deserialize_ident_only_record_pack (line 193) | def test_serialize_deserialize_ident_only_record_pack(ident_testcase, nr...
  function test_serialize_deserialize_ident_only_digest_only_record_pack (line 223) | def test_serialize_deserialize_ident_only_digest_only_record_pack(ident_...
  function test_serialize_deserialize_ident_only_schema_only_record_pack (line 253) | def test_serialize_deserialize_ident_only_schema_only_record_pack(ident_...

FILE: tests/test_remotes.py
  function test_cannot_add_invalid_remote_names (line 15) | def test_cannot_add_invalid_remote_names(repo, name):
  function test_list_all_remotes_works (line 20) | def test_list_all_remotes_works(repo):
  function test_cannot_add_remote_twice_with_same_name (line 46) | def test_cannot_add_remote_twice_with_same_name(repo):
  function test_remote_remote_which_does_not_exist_fails (line 54) | def test_remote_remote_which_does_not_exist_fails(repo):
  function test_can_update_remote_after_removal (line 59) | def test_can_update_remote_after_removal(repo):
  function test_server_is_started_multiple_times_via_ping_pong (line 71) | def test_server_is_started_multiple_times_via_ping_pong(server_instance,
  function test_push_and_clone_master_linear_history_multiple_commits (line 80) | def test_push_and_clone_master_linear_history_multiple_commits(
  function test_server_push_second_branch_with_new_commit (line 136) | def test_server_push_second_branch_with_new_commit(server_instance, repo,
  function test_server_push_second_branch_with_new_commit_then_clone_partial_fetch (line 184) | def test_server_push_second_branch_with_new_commit_then_clone_partial_fe...
  function array5by7_class (line 288) | def array5by7_class():
  function two_branch_multi_commit_repo_class (line 292) | def two_branch_multi_commit_repo_class(server_instance_class, classrepo,...
  class TestLargeRemoteServer (line 392) | class TestLargeRemoteServer:
    method test_server_push_two_branch_then_clone_fetch_data_options (line 401) | def test_server_push_two_branch_then_clone_fetch_data_options(
  function two_multi_format_repo_class (line 489) | def two_multi_format_repo_class(server_instance_class, classrepo):
  class TestRemoteServerFetchDataSample (line 527) | class TestRemoteServerFetchDataSample:
    method test_server_fetch_data_sample (line 563) | def test_server_fetch_data_sample(
    method test_server_fetch_data_sample_commit_not_existing (line 613) | def test_server_fetch_data_sample_commit_not_existing(
    method test_server_fetch_data_sample_branch_not_existing (line 635) | def test_server_fetch_data_sample_branch_not_existing(
    method test_server_fetch_data_sample_branch_and_commit_args_passed_fails (line 657) | def test_server_fetch_data_sample_branch_and_commit_args_passed_fails(
    method test_server_fetch_data_sample_not_existing_fails (line 680) | def test_server_fetch_data_sample_not_existing_fails(
    method test_server_fetch_data_sample_not_valid_type (line 716) | def test_server_fetch_data_sample_not_valid_type(
  function test_push_unchanged_repo_makes_no_modifications (line 746) | def test_push_unchanged_repo_makes_no_modifications(written_two_cmt_serv...
  function test_fetch_unchanged_repo_makes_no_modifications (line 753) | def test_fetch_unchanged_repo_makes_no_modifications(written_two_cmt_ser...
  function test_fetch_newer_disk_repo_makes_no_modifications (line 760) | def test_fetch_newer_disk_repo_makes_no_modifications(written_two_cmt_se...
  function test_fetch_branch_which_does_not_exist_client_server_raises_rpc_error (line 772) | def test_fetch_branch_which_does_not_exist_client_server_raises_rpc_erro...
  function test_fetch_branch_on_client_which_does_not_existserver_raises_rpc_error (line 780) | def test_fetch_branch_on_client_which_does_not_existserver_raises_rpc_er...
  function test_push_clone_three_way_merge (line 789) | def test_push_clone_three_way_merge(server_instance, repo_2_br_no_conf, ...
  function test_push_restricted_with_right_username_password (line 824) | def test_push_restricted_with_right_username_password(server_instance_pu...
  function test_push_restricted_wrong_user_and_password (line 871) | def test_push_restricted_wrong_user_and_password(server_instance_push_re...

FILE: tests/test_repo_integrity_verification.py
  function diverse_repo (line 7) | def diverse_repo(repo):
  function test_verify_correct (line 79) | def test_verify_correct(diverse_repo):
  class TestVerifyCommitRefDigests (line 83) | class TestVerifyCommitRefDigests(object):
    method test_remove_array_digest_is_caught (line 85) | def test_remove_array_digest_is_caught(self, diverse_repo):
    method test_remove_schema_digest_is_caught (line 104) | def test_remove_schema_digest_is_caught(self, diverse_repo):
  class TestVerifyCommitTree (line 123) | class TestVerifyCommitTree(object):
    method test_parent_ref_digest_of_cmt_does_not_exist (line 125) | def test_parent_ref_digest_of_cmt_does_not_exist(self, diverse_repo):
    method test_parent_ref_references_nonexisting_commits (line 144) | def test_parent_ref_references_nonexisting_commits(self, diverse_repo):
    method test_parent_ref_has_two_initial_commits (line 181) | def test_parent_ref_has_two_initial_commits(self, diverse_repo):
  class TestBranchIntegrity (line 206) | class TestBranchIntegrity(object):
    method test_atleast_one_branch_exists (line 208) | def test_atleast_one_branch_exists(self, diverse_repo):
    method test_branch_name_head_commit_digests_exist (line 225) | def test_branch_name_head_commit_digests_exist(self, diverse_repo):
    method test_staging_head_branch_name_exists (line 256) | def test_staging_head_branch_name_exists(self, diverse_repo):
  function test_data_digest_modification_is_caught (line 273) | def test_data_digest_modification_is_caught(diverse_repo):
  function test_data_digest_remote_location_warns (line 294) | def test_data_digest_remote_location_warns(diverse_repo):
  function test_schema_digest_modification_is_caught (line 308) | def test_schema_digest_modification_is_caught(diverse_repo):

FILE: tests/test_utils.py
  function test_unique_everseen (line 10) | def test_unique_everseen(arg, key, expected):
  function test_valid_directory_path_errors_on_invalid_path_arg (line 18) | def test_valid_directory_path_errors_on_invalid_path_arg(pth):
  function test_valid_directory_path_recognizes_not_a_directory (line 24) | def test_valid_directory_path_recognizes_not_a_directory(managed_tmpdir):
  function test_format_bytes (line 43) | def test_format_bytes(arg, expected):
  function test_parse_bytes (line 61) | def test_parse_bytes(arg, expected):
  function test_find_next_prime (line 79) | def test_find_next_prime(arg, expected):

FILE: tests/test_version.py
  function test_infinity_repr (line 31) | def test_infinity_repr():
  function test_negative_infinity_repr (line 35) | def test_negative_infinity_repr():
  function test_infinity_hash (line 39) | def test_infinity_hash():
  function test_negative_infinity_hash (line 43) | def test_negative_infinity_hash():
  function test_infinity_comparison (line 48) | def test_infinity_comparison(left):
  function test_negative_infinity_lesser (line 58) | def test_negative_infinity_lesser(left):
  function test_infinty_equal (line 67) | def test_infinty_equal():
  function test_negative_infinity_equal (line 71) | def test_negative_infinity_equal():
  function test_negate_infinity (line 75) | def test_negate_infinity():
  function test_negate_negative_infinity (line 79) | def test_negate_negative_infinity():
  function test_parse (line 89) | def test_parse(version, klass):
  function test_legacy_version_raises (line 93) | def test_legacy_version_raises():
  class TestVersion (line 133) | class TestVersion:
    method test_valid_versions (line 135) | def test_valid_versions(self, version):
    method test_invalid_versions (line 151) | def test_invalid_versions(self, version):
    method test_normalized_versions (line 273) | def test_normalized_versions(self, version, normalized):
    method test_version_str_repr (line 328) | def test_version_str_repr(self, version, expected):
    method test_version_rc_and_c_equals (line 332) | def test_version_rc_and_c_equals(self):
    method test_version_hash (line 336) | def test_version_hash(self, version):
    method test_version_public (line 373) | def test_version_public(self, version, public):
    method test_version_base_version (line 410) | def test_version_base_version(self, version, base_version):
    method test_version_epoch (line 447) | def test_version_epoch(self, version, epoch):
    method test_version_release (line 484) | def test_version_release(self, version, release):
    method test_version_local (line 521) | def test_version_local(self, version, local):
    method test_version_pre (line 558) | def test_version_pre(self, version, pre):
    method test_version_is_prerelease (line 588) | def test_version_is_prerelease(self, version, expected):
    method test_version_dev (line 625) | def test_version_dev(self, version, dev):
    method test_version_is_devrelease (line 662) | def test_version_is_devrelease(self, version, expected):
    method test_version_post (line 699) | def test_version_post(self, version, post):
    method test_version_is_postrelease (line 712) | def test_version_is_postrelease(self, version, expected):
    method test_comparison_true (line 755) | def test_comparison_true(self, left, right, op):
    method test_comparison_false (line 798) | def test_comparison_false(self, left, right, op):
    method test_compare_other (line 802) | def test_compare_other(self, monkeypatch, op, expected):
    method test_major_version (line 807) | def test_major_version(self):
    method test_minor_version (line 810) | def test_minor_version(self):
    method test_micro_version (line 814) | def test_micro_version(self):

FILE: tests/test_visualizations.py
  function verify_out (line 5) | def verify_out(capfd, expected):
  function test_flat_merge_graph (line 11) | def test_flat_merge_graph(capfd):
  function test_three_way_merge_graph (line 55) | def test_three_way_merge_graph(capfd):
  function test_octopus_merge_graph (line 115) | def test_octopus_merge_graph(capfd):
  function test_octopus_large_merge_graph (line 222) | def test_octopus_large_merge_graph(capfd):
  function test_repo_log_return_contents_correct_default_args (line 366) | def test_repo_log_return_contents_correct_default_args(repo):
  function test_repo_log_return_contents_correct_when_specify_branch_name (line 407) | def test_repo_log_return_contents_correct_when_specify_branch_name(repo):
  function test_repo_log_return_contents_correct_when_specify_digest (line 448) | def test_repo_log_return_contents_correct_when_specify_digest(repo):

FILE: tests/typesystem/test_ndarray_typesysem.py
  class TestInvalidValues (line 8) | class TestInvalidValues:
    method test_shape_not_tuple_of_int_less_than_32_dims (line 16) | def test_shape_not_tuple_of_int_less_than_32_dims(self, shape, expecte...
    method test_column_type_must_be_ndarray (line 24) | def test_column_type_must_be_ndarray(self, coltype):
    method test_column_layout_must_be_valid_value (line 32) | def test_column_layout_must_be_valid_value(self, collayout):
    method test_fixed_shape_backend_code_valid_value (line 40) | def test_fixed_shape_backend_code_valid_value(self, backend):
    method test_variable_shape_backend_code_valid_value (line 46) | def test_variable_shape_backend_code_valid_value(self, backend):
    method test_backend_options_must_be_dict_or_nonetype (line 52) | def test_backend_options_must_be_dict_or_nonetype(self, opts):
    method test_backend_must_be_specified_if_backend_options_provided (line 58) | def test_backend_must_be_specified_if_backend_options_provided(self):
    method test_variable_shape_must_have_variable_shape_schema_type (line 66) | def test_variable_shape_must_have_variable_shape_schema_type(self, sch...
    method test_fixed_shape_must_have_fixed_shape_schema_type (line 72) | def test_fixed_shape_must_have_fixed_shape_schema_type(self, schema_ty...

FILE: tests/typesystem/test_pybytes_typesystem.py
  class TestInvalidValues (line 7) | class TestInvalidValues:
    method test_column_type_must_be_str (line 10) | def test_column_type_must_be_str(self, coltype):
    method test_column_layout_must_be_valid_value (line 15) | def test_column_layout_must_be_valid_value(self, collayout):
    method test_variable_shape_backend_code_valid_value (line 20) | def test_variable_shape_backend_code_valid_value(self, backend):
    method test_backend_options_must_be_dict_or_nonetype (line 25) | def test_backend_options_must_be_dict_or_nonetype(self, opts):
    method test_backend_must_be_specified_if_backend_options_provided (line 29) | def test_backend_must_be_specified_if_backend_options_provided(self):
    method test_variable_shape_must_have_variable_shape_schema_type (line 34) | def test_variable_shape_must_have_variable_shape_schema_type(self, sch...
  function column_layout (line 43) | def column_layout(request):
  function backend (line 48) | def backend(request):
  function backend_options (line 53) | def backend_options(request):
  function valid_schema (line 58) | def valid_schema(column_layout, backend, backend_options):
  class TestValidSchema (line 64) | class TestValidSchema:
    method test_valid_data (line 72) | def test_valid_data(self, valid_schema, data):
    method test_data_over_2MB_size_not_allowed (line 77) | def test_data_over_2MB_size_not_allowed(self, valid_schema):

FILE: tests/typesystem/test_pystr_typesystem.py
  class TestInvalidValues (line 9) | class TestInvalidValues:
    method test_column_type_must_be_str (line 12) | def test_column_type_must_be_str(self, coltype):
    method test_column_layout_must_be_valid_value (line 17) | def test_column_layout_must_be_valid_value(self, collayout):
    method test_variable_shape_backend_code_valid_value (line 22) | def test_variable_shape_backend_code_valid_value(self, backend):
    method test_backend_options_must_be_dict_or_nonetype (line 27) | def test_backend_options_must_be_dict_or_nonetype(self, opts):
    method test_backend_must_be_specified_if_backend_options_provided (line 31) | def test_backend_must_be_specified_if_backend_options_provided(self):
    method test_variable_shape_must_have_variable_shape_schema_type (line 36) | def test_variable_shape_must_have_variable_shape_schema_type(self, sch...
  function column_layout (line 45) | def column_layout(request):
  function backend (line 50) | def backend(request):
  function backend_options (line 55) | def backend_options(request):
  function valid_schema (line 60) | def valid_schema(column_layout, backend, backend_options):
  class TestValidSchema (line 66) | class TestValidSchema:
    method test_valid_data (line 72) | def test_valid_data(self, valid_schema, data):
    method test_large_unicode_codepoints_strings_compatible (line 78) | def test_large_unicode_codepoints_strings_compatible(self, valid_schem...
    method test_strings_over_2MB_size_not_allowed (line 83) | def test_strings_over_2MB_size_not_allowed(self, valid_schema):

[
  {
    "path": ".bumpversion.cfg",
    "chars": 840,
    "preview": "[bumpversion]\ncurrent_version = 0.5.2\ncommit = True\ntag = False\nparse = (?P<major>\\d+)\\.(?P<minor>\\d+)\\.(?P<patch>\\d+)(\\"
  },
  {
    "path": ".coveragerc",
    "chars": 387,
    "preview": "[paths]\nsource =\n   src\n\n[run]\nbranch = True\nparallel = True\nsource =\n    hangar\n    tests\nomit =\n    */hangar/__main__."
  },
  {
    "path": ".editorconfig",
    "chars": 215,
    "preview": "# see http://editorconfig.org\nroot = true\n\n[*]\nend_of_line = lf\ntrim_trailing_whitespace = true\ninsert_final_newline = t"
  },
  {
    "path": ".gitattributes",
    "chars": 79,
    "preview": "* text=auto\n\n*.bat eol=crlf\n*.cmd eol=crlf\n*.ps1 eol=lf\n*.sh eol=lf\n*.rtf -text"
  },
  {
    "path": ".github/ISSUE_TEMPLATE/bug_report.md",
    "chars": 856,
    "preview": "---\nname: Bug report\nabout: Create a report to help us improve\ntitle: \"[BUG REPORT]\"\nlabels: 'Bug: Awaiting Priority Ass"
  },
  {
    "path": ".github/ISSUE_TEMPLATE/feature_request.md",
    "chars": 621,
    "preview": "---\nname: Feature request\nabout: Suggest an idea for this project\ntitle: \"[FEATURE REQUEST]\"\nlabels: enhancement\nassigne"
  },
  {
    "path": ".github/ISSUE_TEMPLATE/questions_and_documentation.md",
    "chars": 943,
    "preview": "---\nname: Questions and Documentation\nabout: Is something confusing? The documentation not clear? We can help\ntitle: \"[Q"
  },
  {
    "path": ".github/PULL_REQUEST_TEMPLATE.md",
    "chars": 1440,
    "preview": "## Motivation and Context\n#### _Why is this change required? What problem does it solve?:_\n\n\n\n#### _If it fixes an open "
  },
  {
    "path": ".github/workflows/asvbench.yml",
    "chars": 1448,
    "preview": "name: ASV Benchmarking\n\non:\n  pull_request:\n    branches:\n    - master\n\njobs:\n  run_benchmarks:\n    runs-on: ${{ matrix."
  },
  {
    "path": ".github/workflows/release.yml",
    "chars": 6408,
    "preview": "name: release\n\non:\n  release:\n    types: [published, prereleased]\n\njobs:\n  build-linux-cp36:\n    runs-on: ubuntu-latest\n"
  },
  {
    "path": ".github/workflows/testsphinx.yml",
    "chars": 653,
    "preview": "name: Build Sphinx Docs\n\non:\n  pull_request:\n    branches:\n      - master\n  push:\n    branches:\n      - master\n\njobs:\n  "
  },
  {
    "path": ".github/workflows/testsuite.yml",
    "chars": 2087,
    "preview": "name: Run Test Suite\n\non:\n  pull_request:\n    branches:\n      - master\n  push:\n    branches:\n      - master\n\njobs:\n  run"
  },
  {
    "path": ".gitignore",
    "chars": 897,
    "preview": "*.py[cod]\n\n# C extensions\n*.c\n*.so\ncython_debug/\n\n# cython annotation files\nsrc/hangar/backends/*.html\ndocs/_build\n\n# Pa"
  },
  {
    "path": ".readthedocs.yml",
    "chars": 636,
    "preview": "# .readthedocs.yml\n# Read the Docs configuration file\n# See https://docs.readthedocs.io/en/stable/config-file/v2.html fo"
  },
  {
    "path": "AUTHORS.rst",
    "chars": 174,
    "preview": "Authors\n=======\n\n* Richard Izzo - rick@tensorwerk.com\n* Luca Antiga - luca@tensorwerk.com\n* Sherin Thomas - sherin@tenso"
  },
  {
    "path": "CHANGELOG.rst",
    "chars": 19774,
    "preview": "==========\nChange Log\n==========\n\n\n_`In-Progress`\n==============\n\nImprovements\n------------\n\n* New API design for datase"
  },
  {
    "path": "CODE_OF_CONDUCT.rst",
    "chars": 3512,
    "preview": "===========================\nContributor Code of Conduct\n===========================\n\nOur Pledge\n----------\n\nIn the inter"
  },
  {
    "path": "CONTRIBUTING.rst",
    "chars": 2818,
    "preview": "============\nContributing\n============\n\nContributions are welcome, and they are greatly appreciated! Every\nlittle bit he"
  },
  {
    "path": "LICENSE",
    "chars": 10757,
    "preview": "\n                                 Apache License\n                           Version 2.0, January 2004\n                  "
  },
  {
    "path": "MANIFEST.in",
    "chars": 390,
    "preview": "graft docs\ngraft src\ngraft tests\n\ninclude .bumpversion.cfg\ninclude .coveragerc\ninclude .editorconfig\n\ninclude AUTHORS.rs"
  },
  {
    "path": "README.rst",
    "chars": 4898,
    "preview": "========\nOverview\n========\n\n.. start-badges\n\n.. list-table::\n    :stub-columns: 1\n\n    * - docs\n      - |docs|\n    * - t"
  },
  {
    "path": "asv_bench/README.rst",
    "chars": 6126,
    "preview": "Hangar Performance Benchmarking Suite\n=====================================\n\nA set of benchmarking tools are included in"
  },
  {
    "path": "asv_bench/asv.conf.json",
    "chars": 6944,
    "preview": "{\n    // The version of the config file format.  Do not change, unless\n    // you know what you are doing.\n    \"version\""
  },
  {
    "path": "asv_bench/benchmarks/__init__.py",
    "chars": 1,
    "preview": "\n"
  },
  {
    "path": "asv_bench/benchmarks/backend_comparisons.py",
    "chars": 5649,
    "preview": "# Write the benchmarking functions here.\n# See \"Writing benchmarks\" in the asv docs for more information.\nimport numpy a"
  },
  {
    "path": "asv_bench/benchmarks/backends/__init__.py",
    "chars": 0,
    "preview": ""
  },
  {
    "path": "asv_bench/benchmarks/backends/hdf5_00.py",
    "chars": 3853,
    "preview": "# Write the benchmarking functions here.\n# See \"Writing benchmarks\" in the asv docs for more information.\nimport numpy a"
  },
  {
    "path": "asv_bench/benchmarks/backends/hdf5_01.py",
    "chars": 3947,
    "preview": "# Write the benchmarking functions here.\n# See \"Writing benchmarks\" in the asv docs for more information.\nimport numpy a"
  },
  {
    "path": "asv_bench/benchmarks/backends/numpy_10.py",
    "chars": 3865,
    "preview": "# Write the benchmarking functions here.\n# See \"Writing benchmarks\" in the asv docs for more information.\nimport numpy a"
  },
  {
    "path": "asv_bench/benchmarks/commit_and_checkout.py",
    "chars": 2707,
    "preview": "from tempfile import mkdtemp\nfrom shutil import rmtree\nimport numpy as np\nfrom hangar import Repository\n\n\nclass MakeComm"
  },
  {
    "path": "asv_bench/benchmarks/package.py",
    "chars": 173,
    "preview": "\n\nclass TimeImport(object):\n\n    processes = 2\n    repeat = (5, 10, 10.0)\n\n    def timeraw_import(self):\n        return "
  },
  {
    "path": "codecov.yml",
    "chars": 192,
    "preview": "comment:\n  layout: \"diff, files\"\n  behavior: default\n  require_changes: false  # if true: only post the comment if cover"
  },
  {
    "path": "docs/Tutorial-001.ipynb",
    "chars": 43572,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"## Part 1: Creating A Repository An"
  },
  {
    "path": "docs/Tutorial-002.ipynb",
    "chars": 51352,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"## Part 2: Checkouts, Branching, & "
  },
  {
    "path": "docs/Tutorial-003.ipynb",
    "chars": 56307,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"## Part 3: Working With Remote Serv"
  },
  {
    "path": "docs/Tutorial-Dataset.ipynb",
    "chars": 243381,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {\n    \"colab_type\": \"text\",\n    \"id\": \"CQhd0TTQCMeh\"\n   },\n"
  },
  {
    "path": "docs/Tutorial-QuickStart.ipynb",
    "chars": 30134,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"## Quick Start Tutorial\"\n   ]\n  },\n"
  },
  {
    "path": "docs/Tutorial-RealQuickStart.ipynb",
    "chars": 33026,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"## \\\"Real World\\\" Quick Start Tutor"
  },
  {
    "path": "docs/api.rst",
    "chars": 3030,
    "preview": ".. _ref-api:\n\n==========\nPython API\n==========\n\nThis is the python API for the Hangar project.\n\n\nRepository\n==========\n\n"
  },
  {
    "path": "docs/authors.rst",
    "chars": 28,
    "preview": ".. include:: ../AUTHORS.rst\n"
  },
  {
    "path": "docs/backends/hdf5_00.rst",
    "chars": 79,
    "preview": "Local HDF5 Backend\n==================\n\n.. automodule:: hangar.backends.hdf5_00\n"
  },
  {
    "path": "docs/backends/hdf5_01.rst",
    "chars": 106,
    "preview": "Fixed Shape Optimized Local HDF5\n================================\n\n.. automodule:: hangar.backends.hdf5_01"
  },
  {
    "path": "docs/backends/lmdb_30.rst",
    "chars": 117,
    "preview": "Variable Shape LMDB String Data Store\n=====================================\n\n.. automodule:: hangar.backends.lmdb_30\n"
  },
  {
    "path": "docs/backends/numpy_10.rst",
    "chars": 90,
    "preview": "Local NP Memmap Backend\n=======================\n\n.. automodule:: hangar.backends.numpy_10\n"
  },
  {
    "path": "docs/backends/remote_50.rst",
    "chars": 103,
    "preview": "Remote Server Unknown Backend\n=============================\n\n.. automodule:: hangar.backends.remote_50\n"
  },
  {
    "path": "docs/backends.rst",
    "chars": 732,
    "preview": ".. _ref-backends:\n\n.. note::\n\n   The following documentation contains highly technical descriptions of the\n   data writi"
  },
  {
    "path": "docs/benchmarking.rst",
    "chars": 36,
    "preview": ".. include:: ../asv_bench/README.rst"
  },
  {
    "path": "docs/changelog.rst",
    "chars": 30,
    "preview": ".. include:: ../CHANGELOG.rst\n"
  },
  {
    "path": "docs/cli.rst",
    "chars": 469,
    "preview": "Hangar CLI Documentation\n========================\n\nThe CLI described below is automatically available after the Hangar P"
  },
  {
    "path": "docs/codeofconduct.rst",
    "chars": 61,
    "preview": ".. _ref-code-of-conduct:\n\n.. include:: ../CODE_OF_CONDUCT.rst"
  },
  {
    "path": "docs/concepts.rst",
    "chars": 27938,
    "preview": ".. _ref-concepts:\n\n####################\nHangar Core Concepts\n####################\n\n.. warning::\n\n  The usage info displa"
  },
  {
    "path": "docs/conf.py",
    "chars": 3426,
    "preview": "# -*- coding: utf-8 -*-\nfrom __future__ import unicode_literals\n\nimport os\n\n\nextensions = [\n    'sphinx.ext.autodoc',\n  "
  },
  {
    "path": "docs/contributing.rst",
    "chars": 32,
    "preview": ".. include:: ../CONTRIBUTING.rst"
  },
  {
    "path": "docs/contributingindex.rst",
    "chars": 172,
    "preview": ".. _ref-contributing:\n\n######################\nContributing to Hangar\n######################\n\n.. toctree::\n   :maxdepth: "
  },
  {
    "path": "docs/design.rst",
    "chars": 15509,
    "preview": ".. _ref-hangar-under-the-hood:\n\n=====================\nHangar Under The Hood\n=====================\n\nAt its core, Hangar i"
  },
  {
    "path": "docs/externals.rst",
    "chars": 321,
    "preview": ".. _ref-external:\n\n===============\nHangar External\n===============\n\nHigh level interaction interface between hangar and "
  },
  {
    "path": "docs/faq.rst",
    "chars": 11067,
    "preview": ".. _ref-faq:\n\n==========================\nFrequently Asked Questions\n==========================\n\nThe following documentat"
  },
  {
    "path": "docs/index.rst",
    "chars": 316,
    "preview": ".. include:: ../README.rst\n\n.. toctree::\n   :maxdepth: 3\n\n   readme\n   quickstart\n   installation\n   concepts\n   api\n   "
  },
  {
    "path": "docs/installation.rst",
    "chars": 1854,
    "preview": ".. _ref_installation:\n\n============\nInstallation\n============\n\nFor general usage it is recommended that you use a pre-bu"
  },
  {
    "path": "docs/noindexapi/apiinit.rst",
    "chars": 233,
    "preview": ".. automethod:: hangar.checkout.WriterCheckout.add_ndarray_column\n   :noindex:\n\n.. automethod:: hangar.checkout.WriterCh"
  },
  {
    "path": "docs/noindexapi/apiremotefetchdata.rst",
    "chars": 65,
    "preview": ".. automethod:: hangar.repository.Remotes.fetch_data\n   :noindex:"
  },
  {
    "path": "docs/quickstart.rst",
    "chars": 208,
    "preview": "=====\nUsage\n=====\n\nTo use Hangar in a project::\n\n\tfrom hangar import Repository\n\n\nPlease refer to the :ref:`ref-tutorial"
  },
  {
    "path": "docs/readme.rst",
    "chars": 27,
    "preview": ".. include:: ../README.rst\n"
  },
  {
    "path": "docs/requirements.txt",
    "chars": 96,
    "preview": "sphinx>=2.0\nsphinx-material\nsphinx-click\nnbsphinx\nsphinx-copybutton\nrecommonmark\nIPython\nCython\n"
  },
  {
    "path": "docs/requirements_rtd.txt",
    "chars": 254,
    "preview": "https://files.pythonhosted.org/packages/84/ad/ee890cbea43dd97cbb05aa30b9b08ff908efa8407f514e9d447dd365ef15/tensorflow_cp"
  },
  {
    "path": "docs/spelling_wordlist.txt",
    "chars": 109,
    "preview": "builtin\nbuiltins\nclassmethod\nstaticmethod\nclassmethods\nstaticmethods\nargs\nkwargs\ncallstack\nChangelog\nIndices\n"
  },
  {
    "path": "docs/tutorial.rst",
    "chars": 235,
    "preview": ".. _ref-tutorial:\n\n###############\nHangar Tutorial\n###############\n\n.. toctree::\n   :maxdepth: 2\n   :titlesonly:\n\n   Tut"
  },
  {
    "path": "hangar.yml",
    "chars": 1214,
    "preview": "# Metadata file for Zenoodo source code upload\n# This is part of the Escape 2020 project and was originally\n# requested "
  },
  {
    "path": "mypy.ini",
    "chars": 325,
    "preview": "# ------------------------- Global Options ------------------------------------\n\n[mypy]\nwarn_unused_configs = True\n\n# --"
  },
  {
    "path": "scripts/run_proto_codegen.py",
    "chars": 1829,
    "preview": "import os\nfrom shutil import move\n\nfrom grpc_tools import protoc\n\n\n# ------------------------- output locations --------"
  },
  {
    "path": "setup.cfg",
    "chars": 525,
    "preview": "[bdist_wheel]\nuniversal = 0\n\n\n[flake8]\nmax-line-length = 150\nexclude = */migrations/*\n\n[tool:pytest]\nnorecursedirs =\n   "
  },
  {
    "path": "setup.py",
    "chars": 7726,
    "preview": "#!/usr/bin/env python\n# -*- encoding: utf-8 -*-\nimport os\nimport platform\nimport sys\nfrom os.path import join\nfrom distu"
  },
  {
    "path": "src/hangar/__init__.py",
    "chars": 84,
    "preview": "__version__ = '0.5.2'\n__all__ = ('Repository',)\n\nfrom .repository import Repository\n"
  },
  {
    "path": "src/hangar/__main__.py",
    "chars": 360,
    "preview": "\"\"\"\nEntrypoint module, in case you use `python -m hangar`.\n\n\nWhy does this file exist, and why __main__? For more info, "
  },
  {
    "path": "src/hangar/_version.py",
    "chars": 13587,
    "preview": "# -*- coding: utf-8 -*-\n\"\"\"\nPortions of this code have been taken and modified from the \"packaging\" project.\n\nURL:      "
  },
  {
    "path": "src/hangar/backends/__init__.py",
    "chars": 5414,
    "preview": "\"\"\"Definition and dynamic routing to Hangar backend implementations.\n\nThis module defines the available backends for a H"
  },
  {
    "path": "src/hangar/backends/chunk.py",
    "chars": 5248,
    "preview": "\"\"\"\nPortions of this code have been taken and modified from the \"PyTables\" project.\n\nURL:      https://github.com/PyTabl"
  },
  {
    "path": "src/hangar/backends/hdf5_00.py",
    "chars": 33140,
    "preview": "\"\"\"Local HDF5 Backend Implementation, Identifier: ``HDF5_00``\n\nBackend Identifiers\n===================\n\n*  Backend: ``0`"
  },
  {
    "path": "src/hangar/backends/hdf5_01.py",
    "chars": 34247,
    "preview": "\"\"\"Local HDF5 Backend Implementation, Identifier: ``HDF5_01``\n\nBackend Identifiers\n===================\n\n*  Backend: ``0`"
  },
  {
    "path": "src/hangar/backends/lmdb_30.py",
    "chars": 13892,
    "preview": "\"\"\"Local LMDB Backend Implementation, Identifier: ``LMDB_30``\n\nBackend Identifiers\n===================\n\n*  Backend: ``3`"
  },
  {
    "path": "src/hangar/backends/lmdb_31.py",
    "chars": 13790,
    "preview": "\"\"\"Local LMDB Backend Implementation, Identifier: ``LMDB_30``\n\nBackend Identifiers\n===================\n\n*  Backend: ``3`"
  },
  {
    "path": "src/hangar/backends/numpy_10.py",
    "chars": 14813,
    "preview": "\"\"\"Local Numpy memmap Backend Implementation, Identifier: ``NUMPY_10``\n\nBackend Identifiers\n===================\n\n*  Back"
  },
  {
    "path": "src/hangar/backends/remote_50.py",
    "chars": 5338,
    "preview": "\"\"\"Remote server location unknown backend, Identifier: ``REMOTE_50``\n\nBackend Identifiers\n===================\n\n*  Backen"
  },
  {
    "path": "src/hangar/backends/specparse.pyx",
    "chars": 5725,
    "preview": "# decoding methods to convert from byte string -> spec struct.\n\nfrom .specs cimport HDF5_01_DataHashSpec, \\\n    HDF5_00_"
  },
  {
    "path": "src/hangar/backends/specs.pxd",
    "chars": 1069,
    "preview": "# header files for spec containers\n\ncdef class HDF5_01_DataHashSpec:\n\n    cdef readonly str backend\n    cdef readonly st"
  },
  {
    "path": "src/hangar/backends/specs.pyx",
    "chars": 4528,
    "preview": "# memory efficient container classes for data backends specs.\n# Allow for attribute access similar to named tuples.\n\ncde"
  },
  {
    "path": "src/hangar/bulk_importer.py",
    "chars": 42172,
    "preview": "\"\"\"Bulk importer methods to ingest large quantities of data into Hangar.\n\nThe following module is designed to address ch"
  },
  {
    "path": "src/hangar/checkout.py",
    "chars": 48955,
    "preview": "import atexit\nfrom pathlib import Path\nimport weakref\nfrom contextlib import suppress, ExitStack\nfrom uuid import uuid4\n"
  },
  {
    "path": "src/hangar/cli/__init__.py",
    "chars": 42,
    "preview": "from .cli import main\n\n__all__ = ['main']\n"
  },
  {
    "path": "src/hangar/cli/cli.py",
    "chars": 31482,
    "preview": "\"\"\"Module that contains the command line app.\n\nWhy does this file exist, and why not put this in __main__?\n\n   You might"
  },
  {
    "path": "src/hangar/cli/utils.py",
    "chars": 1520,
    "preview": "import click\n\n\nclass StrOrIntType(click.ParamType):\n    \"\"\"Custom type for click to parse the sample name\n    argument t"
  },
  {
    "path": "src/hangar/columns/__init__.py",
    "chars": 451,
    "preview": "from .column import Columns, ModifierTypes\nfrom .common import ColumnTxn\nfrom .constructors import (\n    generate_flat_c"
  },
  {
    "path": "src/hangar/columns/column.py",
    "chars": 18504,
    "preview": "\"\"\"Constructor and Interaction Class for Columns\n\"\"\"\nfrom contextlib import ExitStack\nfrom pathlib import Path\nfrom typi"
  },
  {
    "path": "src/hangar/columns/common.py",
    "chars": 5233,
    "preview": "from contextlib import contextmanager\nfrom typing import Optional\n\nimport lmdb\n\nfrom ..txnctx import TxnRegister\n\n\nclass"
  },
  {
    "path": "src/hangar/columns/constructors.py",
    "chars": 8472,
    "preview": "\"\"\"Constructors for initializing FlatSampleReader and NestedSampleReader columns\n\"\"\"\nimport warnings\nfrom _weakref impor"
  },
  {
    "path": "src/hangar/columns/introspection.py",
    "chars": 774,
    "preview": "from .layout_flat import FlatSampleReader, FlatSampleWriter\nfrom .layout_nested import (\n    FlatSubsampleReader,\n    Fl"
  },
  {
    "path": "src/hangar/columns/layout_flat.py",
    "chars": 26560,
    "preview": "\"\"\"Accessor class for columns containing single-level key/value mappings\n\nThe FlatSampleReader container is used to stor"
  },
  {
    "path": "src/hangar/columns/layout_nested.py",
    "chars": 43305,
    "preview": "\"\"\"Accessor column containing nested mapping of data under top level keys.\n\"\"\"\nfrom contextlib import ExitStack\nfrom pat"
  },
  {
    "path": "src/hangar/constants.py",
    "chars": 1309,
    "preview": "from .utils import is_64bits, parse_bytes\n\n# parsing constants\n\nSEP_KEY = ':'\nSEP_LST = ' '\nSEP_CMT = ' << '\nSEP_SLC = \""
  },
  {
    "path": "src/hangar/context.py",
    "chars": 8873,
    "preview": "import configparser\nimport os\nfrom pathlib import Path\nimport platform\nimport shutil\nimport tempfile\nimport warnings\nfro"
  },
  {
    "path": "src/hangar/dataset/__init__.py",
    "chars": 8003,
    "preview": "__all__ = ('make_numpy_dataset', 'make_torch_dataset', 'make_tensorflow_dataset')\n\nfrom typing import Sequence, Callable"
  },
  {
    "path": "src/hangar/dataset/common.py",
    "chars": 4501,
    "preview": "import typing\nfrom typing import Union, Sequence, Tuple, List, Dict\nfrom collections import OrderedDict\n\nfrom ..columns "
  },
  {
    "path": "src/hangar/dataset/numpy_dset.py",
    "chars": 9010,
    "preview": "from typing import Sequence, Callable, TYPE_CHECKING, Union, List, Tuple\nimport random\n\nimport numpy as np\n\nfrom .common"
  },
  {
    "path": "src/hangar/dataset/tensorflow_dset.py",
    "chars": 4721,
    "preview": "from typing import Sequence, Callable, List, Tuple, Union\nimport typing\nfrom functools import partial\nimport random\n\ntry"
  },
  {
    "path": "src/hangar/dataset/torch_dset.py",
    "chars": 4503,
    "preview": "from typing import Sequence, TYPE_CHECKING, Union, List, Tuple\nfrom collections import OrderedDict\n\ntry:\n    import torc"
  },
  {
    "path": "src/hangar/diagnostics/__init__.py",
    "chars": 71,
    "preview": "__version__ = '0.5.2'\n\nfrom .graphing import Graph\n\n__all__ = ['Graph']"
  },
  {
    "path": "src/hangar/diagnostics/ecosystem.py",
    "chars": 3258,
    "preview": "from typing import Dict, List, Tuple, Union\n\n\nrequired_packages = [\n    ('hangar', lambda p: p.__version__),\n    ('click"
  },
  {
    "path": "src/hangar/diagnostics/graphing.py",
    "chars": 33462,
    "preview": "# -*- coding: utf-8 -*-\n\"\"\"\nPortions of this code have been taken and modified from the \"asciidag\" project.\n\nURL:      h"
  },
  {
    "path": "src/hangar/diagnostics/integrity.py",
    "chars": 7836,
    "preview": "from pathlib import Path\nimport warnings\n\nimport lmdb\nfrom tqdm import tqdm\n\nfrom ..records import (\n    hash_data_db_ke"
  },
  {
    "path": "src/hangar/diff.py",
    "chars": 22959,
    "preview": "from itertools import starmap\nfrom typing import Iterable, List, NamedTuple, Set, Tuple, Union\n\nimport lmdb\n\nfrom .recor"
  },
  {
    "path": "src/hangar/external/__init__.py",
    "chars": 213,
    "preview": "from ._external import load, save, show, board_show\nfrom .plugin_manager import PluginManager\nfrom .base_plugin import B"
  },
  {
    "path": "src/hangar/external/_external.py",
    "chars": 6320,
    "preview": "\"\"\"\nHigh level methods let user interact with hangar without diving into the internal\nmethods of hangar. We have enabled"
  },
  {
    "path": "src/hangar/external/base_plugin.py",
    "chars": 6710,
    "preview": "\"\"\"\nHangar's external plugin system is designed to make it flexible for users to\nwrite custom plugins for custom data fo"
  },
  {
    "path": "src/hangar/external/plugin_manager.py",
    "chars": 3988,
    "preview": "import pkg_resources\nfrom typing import Callable\n\n\nclass PluginManager(object):\n    \"\"\"\n    Container class that holds t"
  },
  {
    "path": "src/hangar/external_cpython.pxd",
    "chars": 495,
    "preview": "\"\"\" Additional bindings to Python's C-API.\nThese differ from Cython's bindings in ``cpython``.\n\"\"\"\nfrom cpython.ref cimp"
  },
  {
    "path": "src/hangar/merger.py",
    "chars": 10501,
    "preview": "\"\"\"Merge Methods\n\nIn the current implementation only fast-forward and a competent, but limited,\nthree-way merge algorith"
  },
  {
    "path": "src/hangar/mixins/__init__.py",
    "chars": 203,
    "preview": "from .checkout_iteration import CheckoutDictIteration\nfrom .datasetget import GetMixin\nfrom .recorditer import CursorRan"
  },
  {
    "path": "src/hangar/mixins/checkout_iteration.py",
    "chars": 1184,
    "preview": "\n\nclass CheckoutDictIteration:\n    \"\"\"Mixin class for checkout objects which mock common iter methods\n\n    Methods\n    -"
  },
  {
    "path": "src/hangar/mixins/datasetget.py",
    "chars": 8779,
    "preview": "from functools import reduce\nfrom operator import getitem as op_getitem\nfrom contextlib import ExitStack\n\n# noinspection"
  },
  {
    "path": "src/hangar/mixins/recorditer.py",
    "chars": 3046,
    "preview": "from typing import Iterable, Union, Tuple\nimport lmdb\n\n\nclass CursorRangeIterator:\n\n    @staticmethod\n    def cursor_ran"
  },
  {
    "path": "src/hangar/op_state.py",
    "chars": 5088,
    "preview": "import types\nimport sys\n\nimport wrapt\n\n\n@wrapt.decorator\ndef writer_checkout_only(wrapped, instance, args, kwargs) -> ty"
  },
  {
    "path": "src/hangar/optimized_utils.pxd",
    "chars": 1296,
    "preview": "\"\"\"\nPortions of this code have been taken and modified from the \"cytoolz\" project.\n\nURL:      https://github.com/pytoolz"
  },
  {
    "path": "src/hangar/optimized_utils.pyx",
    "chars": 9817,
    "preview": "\"\"\"\nPortions of this code have been taken and modified from the \"cytoolz\" project.\n\nURL:      https://github.com/pytoolz"
  },
  {
    "path": "src/hangar/records/__init__.py",
    "chars": 402,
    "preview": "from .hashmachine import hash_func_from_tcode\nfrom .column_parsers import *\nfrom .recordstructs import (\n    CompatibleD"
  },
  {
    "path": "src/hangar/records/column_parsers.pyx",
    "chars": 7312,
    "preview": "from .recordstructs cimport ColumnSchemaKey, \\\n    FlatColumnDataKey, \\\n    NestedColumnDataKey, \\\n    DataRecordVal\n\nfr"
  },
  {
    "path": "src/hangar/records/commiting.py",
    "chars": 23582,
    "preview": "import configparser\nimport os\nimport shutil\nimport tempfile\nimport time\nfrom contextlib import contextmanager, closing\nf"
  },
  {
    "path": "src/hangar/records/hashmachine.pyx",
    "chars": 4032,
    "preview": "import array\nfrom cpython cimport array\n\nimport numpy as np\nfrom hashlib import blake2b\n\n\ncpdef str hash_type_code_from_"
  },
  {
    "path": "src/hangar/records/hashs.py",
    "chars": 8523,
    "preview": "from pathlib import Path\nfrom typing import Iterable, List, Tuple, Union, Set\n\nimport lmdb\n\nfrom .column_parsers import "
  },
  {
    "path": "src/hangar/records/heads.py",
    "chars": 22273,
    "preview": "import warnings\nfrom collections import defaultdict\nfrom typing import NamedTuple\n\nimport lmdb\n\nfrom .parsing import (\n "
  },
  {
    "path": "src/hangar/records/parsing.py",
    "chars": 15885,
    "preview": "import json\nfrom hashlib import blake2b\nfrom itertools import cycle\nfrom random import randint\nfrom time import perf_cou"
  },
  {
    "path": "src/hangar/records/queries.py",
    "chars": 10645,
    "preview": "from typing import Dict, Iterable, Iterator, List, Set, Tuple, Union, Sequence\n\nimport lmdb\n\nfrom .column_parsers import"
  },
  {
    "path": "src/hangar/records/recordstructs.pxd",
    "chars": 501,
    "preview": "# header file for record containers\n\ncdef class CompatibleData:\n    cdef readonly bint compatible\n    cdef readonly str "
  },
  {
    "path": "src/hangar/records/recordstructs.pyx",
    "chars": 4618,
    "preview": "\ncdef class CompatibleData:\n    \"\"\"Bool recording if data `compatible` and if False the rejection `reason`.\n    \"\"\"\n\n   "
  },
  {
    "path": "src/hangar/records/summarize.py",
    "chars": 11348,
    "preview": "from pathlib import Path\nimport time\nfrom io import StringIO\n\nimport lmdb\n\nfrom .commiting import (\n    get_commit_ances"
  },
  {
    "path": "src/hangar/records/vcompat.py",
    "chars": 4755,
    "preview": "from pathlib import Path\n\nimport lmdb\n\nfrom .parsing import (\n    repo_version_db_key,\n    repo_version_db_val_from_raw_"
  },
  {
    "path": "src/hangar/remote/__init__.py",
    "chars": 0,
    "preview": ""
  },
  {
    "path": "src/hangar/remote/chunks.py",
    "chars": 7223,
    "preview": "import math\nimport struct\nfrom io import BytesIO\nfrom typing import NamedTuple, List, Union, Tuple, Iterable\n\nimport blo"
  },
  {
    "path": "src/hangar/remote/client.py",
    "chars": 25993,
    "preview": "import concurrent.futures\nimport logging\nimport os\nimport tempfile\nimport time\nfrom threading import Lock\nfrom typing im"
  },
  {
    "path": "src/hangar/remote/config_server.ini",
    "chars": 375,
    "preview": "[SERVER_GRPC]\nchannel_address = [::]:50051\nmax_thread_pool_workers = 200\nmax_concurrent_rpcs = 100\nenable_compression = "
  },
  {
    "path": "src/hangar/remote/content.py",
    "chars": 10162,
    "preview": "from typing import NamedTuple, Union, Optional\n\nimport numpy as np\n\nfrom ..columns.constructors import open_file_handles"
  },
  {
    "path": "src/hangar/remote/hangar_service.proto",
    "chars": 9042,
    "preview": "syntax = \"proto3\";\n\npackage hangar;\noption optimize_for = SPEED;\n\n\nservice HangarService {\n\n    rpc PING (PingRequest) r"
  },
  {
    "path": "src/hangar/remote/hangar_service_pb2.py",
    "chars": 85284,
    "preview": "# -*- coding: utf-8 -*-\n# Generated by the protocol buffer compiler.  DO NOT EDIT!\n# source: hangar_service.proto\n\nfrom "
  },
  {
    "path": "src/hangar/remote/hangar_service_pb2.pyi",
    "chars": 29598,
    "preview": "# @generated by generate_proto_mypy_stubs.py.  Do not edit!\nimport sys\nfrom google.protobuf.descriptor import (\n    Desc"
  },
  {
    "path": "src/hangar/remote/hangar_service_pb2_grpc.py",
    "chars": 32854,
    "preview": "# Generated by the gRPC Python protocol compiler plugin. DO NOT EDIT!\nimport grpc\n\nfrom . import hangar_service_pb2 as h"
  },
  {
    "path": "src/hangar/remote/header_manipulator_client_interceptor.py",
    "chars": 3996,
    "preview": "\"\"\"Interceptor that adds headers to outgoing requests\n\nPortions of this code have been taken and modified from the \"gRPC"
  },
  {
    "path": "src/hangar/remote/request_header_validator_interceptor.py",
    "chars": 4020,
    "preview": "\"\"\"Interceptor that ensures a specific header is present.\n\nPortions of this code have been taken and modified from the \""
  },
  {
    "path": "src/hangar/remote/server.py",
    "chars": 32225,
    "preview": "import configparser\nimport os\nimport shutil\nimport tempfile\nimport traceback\nimport warnings\nfrom concurrent import futu"
  },
  {
    "path": "src/hangar/remotes.py",
    "chars": 34777,
    "preview": "import logging\nimport tempfile\nimport time\nimport warnings\nfrom collections import defaultdict\nfrom contextlib import cl"
  },
  {
    "path": "src/hangar/repository.py",
    "chars": 34890,
    "preview": "from pathlib import Path\nimport weakref\nimport warnings\nfrom typing import Union, Optional, List\nfrom io import StringIO"
  },
  {
    "path": "src/hangar/txnctx.py",
    "chars": 5657,
    "preview": "from collections import Counter\nfrom typing import MutableMapping\n\nimport lmdb\n\n\nclass TxnRegisterSingleton(type):\n    _"
  },
  {
    "path": "src/hangar/typesystem/__init__.py",
    "chars": 449,
    "preview": "from .descriptors import (\n    Descriptor, OneOf, DictItems, EmptyDict, SizedIntegerTuple, checkedmeta\n)\nfrom .ndarray i"
  },
  {
    "path": "src/hangar/typesystem/base.py",
    "chars": 3043,
    "preview": "from .descriptors import OneOf, String, checkedmeta\nfrom ..records import hash_func_from_tcode\n\n\n@OneOf(['flat', 'nested"
  },
  {
    "path": "src/hangar/typesystem/descriptors.py",
    "chars": 7885,
    "preview": "\"\"\"\nPortions of this code have been taken and modified from the book:\n\nBeazley, D. and B. K. Jones (2013). Python Cookbo"
  },
  {
    "path": "src/hangar/typesystem/ndarray.py",
    "chars": 6616,
    "preview": "import numpy as np\n\nfrom .base import ColumnBase\nfrom .descriptors import OneOf, String, OptionalString, SizedIntegerTup"
  },
  {
    "path": "src/hangar/typesystem/pybytes.py",
    "chars": 3931,
    "preview": "from .base import ColumnBase\nfrom .descriptors import OneOf, Descriptor, String, OptionalString, OptionalDict\nfrom ..rec"
  },
  {
    "path": "src/hangar/typesystem/pystring.py",
    "chars": 3995,
    "preview": "from .base import ColumnBase\nfrom .descriptors import OneOf, Descriptor, String, OptionalString, OptionalDict\nfrom ..rec"
  },
  {
    "path": "src/hangar/utils.py",
    "chars": 11245,
    "preview": "import os\nimport re\nimport secrets\nimport string\nimport sys\nimport time\nfrom collections import deque\nfrom io import Str"
  },
  {
    "path": "tests/bulk_importer/test_bulk_importer.py",
    "chars": 6739,
    "preview": "import pytest\nimport numpy as np\n\n\ndef assert_equal(arr, arr2):\n    assert np.array_equal(arr, arr2)\n    assert arr.dtyp"
  },
  {
    "path": "tests/conftest.py",
    "chars": 13669,
    "preview": "import time\nimport shutil\nimport random\nfrom os.path import join as pjoin\nfrom os import mkdir\n\nimport pytest\nimport num"
  },
  {
    "path": "tests/ml_datasets/test_dataset.py",
    "chars": 17873,
    "preview": "import sys\n\nimport numpy as np\nimport pytest\nfrom torch.utils.data import DataLoader\nimport warnings\nwith warnings.catch"
  },
  {
    "path": "tests/property_based/conftest.py",
    "chars": 196,
    "preview": "import pytest\n\nvariable_shape_backend_params = ['00', '10']\nfixed_shape_backend_params = ['00', '01', '10']\nstr_variable"
  },
  {
    "path": "tests/property_based/test_pbt_column_flat.py",
    "chars": 9965,
    "preview": "import pytest\nimport numpy as np\n\nfrom conftest import (\n    variable_shape_backend_params,\n    fixed_shape_backend_para"
  },
  {
    "path": "tests/property_based/test_pbt_column_nested.py",
    "chars": 11203,
    "preview": "from collections import defaultdict\n\nimport pytest\nimport numpy as np\n\nfrom conftest import (\n    variable_shape_backend"
  },
  {
    "path": "tests/test_backend_hdf5_00_hdf5_01.py",
    "chars": 6988,
    "preview": "import pytest\nimport numpy as np\n\n\n@pytest.fixture(params=['00', '01'])\ndef be_filehandle(request):\n    if request.param"
  },
  {
    "path": "tests/test_branching.py",
    "chars": 7093,
    "preview": "import pytest\n\n\n@pytest.mark.parametrize('name', [\n    'dummy branch', 'origin/master', '\\nmaster', '\\\\master', 'master\\"
  },
  {
    "path": "tests/test_checkout.py",
    "chars": 26458,
    "preview": "import atexit\nimport numpy as np\nimport pytest\nfrom conftest import fixed_shape_backend_params\n\n\nclass TestCheckout(obje"
  },
  {
    "path": "tests/test_checkout_arrayset_access.py",
    "chars": 22429,
    "preview": "import pytest\nimport numpy as np\n\n\n# -------------------------- Reader Checkout ----------------------------------\n\n\n@py"
  },
  {
    "path": "tests/test_cli.py",
    "chars": 43183,
    "preview": "from os import getcwd\nimport os\nfrom pathlib import Path\n\nimport numpy as np\nimport pytest\nfrom click.testing import Cli"
  },
  {
    "path": "tests/test_column.py",
    "chars": 62584,
    "preview": "import pytest\nimport numpy as np\nfrom conftest import fixed_shape_backend_params, variable_shape_backend_params\nfrom ite"
  },
  {
    "path": "tests/test_column_backends.py",
    "chars": 13197,
    "preview": "import pytest\nimport numpy as np\nfrom conftest import fixed_shape_backend_params\n\n\n@pytest.mark.parametrize('backend', f"
  },
  {
    "path": "tests/test_column_definition_permutations.py",
    "chars": 15416,
    "preview": "from collections import defaultdict\nfrom functools import partial\nimport secrets\nimport string\n\nimport pytest\nimport num"
  },
  {
    "path": "tests/test_column_nested.py",
    "chars": 74930,
    "preview": "\"\"\"Tests for the class methods contained in the nested subsample column accessor.\n\"\"\"\nimport numpy as np\nimport pytest\nf"
  },
  {
    "path": "tests/test_column_pickle.py",
    "chars": 5035,
    "preview": "import pytest\nimport numpy as np\nfrom conftest import fixed_shape_backend_params\n\n\ndef assert_equal(arr, arr2):\n    asse"
  },
  {
    "path": "tests/test_commit_ref_verification.py",
    "chars": 3510,
    "preview": "import pytest\n\n\ndef test_verify_corruption_in_commit_ref_alerts(two_commit_filled_samples_repo):\n    from hangar.records"
  },
  {
    "path": "tests/test_context_management.py",
    "chars": 1212,
    "preview": "import pytest\nimport numpy as np\n\nfrom conftest import fixed_shape_backend_params, variable_shape_backend_params\n\nall_ba"
  },
  {
    "path": "tests/test_diff.py",
    "chars": 15897,
    "preview": "import pytest\nimport numpy as np\n\n\nclass TestReaderWriterDiff(object):\n\n    @pytest.mark.parametrize('writer', [False, T"
  },
  {
    "path": "tests/test_diff_staged_summary.py",
    "chars": 9912,
    "preview": "import pytest\nimport numpy as np\n\n\ndef test_add_samples_to_existing_column(repo_20_filled_samples2):\n    from hangar.rec"
  },
  {
    "path": "tests/test_initiate.py",
    "chars": 10276,
    "preview": "import os\nimport pytest\nfrom hangar import Repository\n\n\ndef test_imports():\n    import hangar\n    from hangar import Rep"
  },
  {
    "path": "tests/test_merging.py",
    "chars": 12645,
    "preview": "import pytest\nimport numpy as np\n\n\ndef test_merge_fails_with_invalid_branch_name(repo_1_br_no_conf):\n    with pytest.rai"
  },
  {
    "path": "tests/test_optimized_utils.py",
    "chars": 4665,
    "preview": "import pytest\n\nfrom hangar.optimized_utils import SizedDict\n\n\ndef test_sizeddict_maxsize_property():\n    d = SizedDict(m"
  },
  {
    "path": "tests/test_remote_serialize.py",
    "chars": 9230,
    "preview": "import pytest\n\nimport numpy as np\n\n\nparam_shapes = [(1,), (1000,), (1, 1), (623, 3, 5), (2, 4, 5, 6, 1, 3)]\nparam_dtypes"
  },
  {
    "path": "tests/test_remotes.py",
    "chars": 36288,
    "preview": "import pytest\n\nimport numpy as np\nimport time\nfrom os.path import join as pjoin\nfrom os import mkdir\nfrom random import "
  },
  {
    "path": "tests/test_repo_integrity_verification.py",
    "chars": 13873,
    "preview": "import pytest\n\nimport numpy as np\n\n\n@pytest.fixture()\ndef diverse_repo(repo):\n    co = repo.checkout(write=True)\n    co."
  },
  {
    "path": "tests/test_utils.py",
    "chars": 2116,
    "preview": "import pytest\n\n\n@pytest.mark.parametrize('arg,key,expected', [\n    ['AAABBBCCC', None, ['A', 'B', 'C']],\n    ['AAABbBCcC"
  },
  {
    "path": "tests/test_version.py",
    "chars": 27619,
    "preview": "# -*- coding: utf-8 -*-\n\"\"\"\nPortions of this code have been taken and modified from the \"packaging\" project.\n\nURL:      "
  },
  {
    "path": "tests/test_visualizations.py",
    "chars": 27736,
    "preview": "import pytest\nimport numpy as np\n\n\ndef verify_out(capfd, expected):\n    out, _ = capfd.readouterr()\n    print(out)\n    a"
  },
  {
    "path": "tests/typesystem/test_ndarray_typesysem.py",
    "chars": 3702,
    "preview": "import pytest\nimport numpy as np\n\n\nfrom hangar.typesystem import NdarrayFixedShape, NdarrayVariableShape\n\n\nclass TestInv"
  },
  {
    "path": "tests/typesystem/test_pybytes_typesystem.py",
    "chars": 3099,
    "preview": "import pytest\nimport numpy as np\n\nfrom hangar.typesystem import BytesVariableShape\n\n\nclass TestInvalidValues:\n\n    @pyte"
  },
  {
    "path": "tests/typesystem/test_pystr_typesystem.py",
    "chars": 3282,
    "preview": "import pytest\nimport numpy as np\nfrom random import randint, choices\n\n\nfrom hangar.typesystem import StringVariableShape"
  },
  {
    "path": "tox.ini",
    "chars": 2683,
    "preview": "[tox]\nenvlist =\n    clean,\n    docs,\n    py{36,37,38}-cov{yes,no}-ml{yes,no},\n    report,\n    mypy\n\n# -------------- dep"
  }
]