Full Code of yt-project/yt for AI

gitextract_qdvf8_62/

├── .codecov.yml
├── .coveragerc
├── .git-blame-ignore-revs
├── .github/
│   ├── CODEOWNERS
│   ├── ISSUE_TEMPLATE.md
│   ├── PULL_REQUEST_TEMPLATE.md
│   ├── config.yml
│   ├── dependabot.yml
│   ├── mergeable.yml
│   └── workflows/
│       ├── bleeding-edge.yaml
│       ├── build-test.yaml
│       ├── type-checking.yaml
│       └── wheels.yaml
├── .gitignore
├── .gitmodules
├── .hgchurn
├── .hgtags
├── .mailmap
├── .pre-commit-config.yaml
├── .tours/
│   └── particle-indexing.tour
├── CITATION
├── CONTRIBUTING.rst
├── COPYING.txt
├── CREDITS
├── MANIFEST.in
├── README.md
├── clean.sh
├── conftest.py
├── doc/
│   ├── Makefile
│   ├── README
│   ├── activate
│   ├── activate.csh
│   ├── cheatsheet.tex
│   ├── docstring_idioms.txt
│   ├── extensions/
│   │   ├── README
│   │   ├── config_help.py
│   │   ├── pythonscript_sphinxext.py
│   │   ├── yt_colormaps.py
│   │   ├── yt_cookbook.py
│   │   └── yt_showfields.py
│   ├── helper_scripts/
│   │   ├── code_support.py
│   │   ├── parse_cb_list.py
│   │   ├── parse_dq_list.py
│   │   ├── parse_object_list.py
│   │   ├── run_recipes.py
│   │   ├── show_fields.py
│   │   ├── split_auto.py
│   │   └── table.py
│   └── source/
│       ├── _static/
│       │   └── custom.css
│       ├── _templates/
│       │   ├── autosummary/
│       │   │   └── class.rst
│       │   └── layout.html
│       ├── about/
│       │   └── index.rst
│       ├── analyzing/
│       │   ├── Particle_Trajectories.ipynb
│       │   ├── _static/
│       │   │   ├── axes.c
│       │   │   ├── axes.h
│       │   │   ├── axes_calculator.pyx
│       │   │   └── axes_calculator_setup.txt
│       │   ├── astropy_integrations.rst
│       │   ├── domain_analysis/
│       │   │   ├── XrayEmissionFields.ipynb
│       │   │   ├── clump_finding.rst
│       │   │   ├── cosmology_calculator.rst
│       │   │   ├── index.rst
│       │   │   └── xray_data_README.rst
│       │   ├── fields.rst
│       │   ├── filtering.rst
│       │   ├── generating_processed_data.rst
│       │   ├── index.rst
│       │   ├── ionization_cube.py
│       │   ├── mesh_filter.ipynb
│       │   ├── objects.rst
│       │   ├── parallel_computation.rst
│       │   ├── particle_filter.ipynb
│       │   ├── saving_data.rst
│       │   ├── time_series_analysis.rst
│       │   └── units.rst
│       ├── conf.py
│       ├── cookbook/
│       │   ├── amrkdtree_downsampling.py
│       │   ├── annotate_timestamp_and_scale.py
│       │   ├── annotations.py
│       │   ├── average_value.py
│       │   ├── calculating_information.rst
│       │   ├── camera_movement.py
│       │   ├── changing_label_formats.py
│       │   ├── colormaps.py
│       │   ├── complex_plots.rst
│       │   ├── constructing_data_objects.rst
│       │   ├── contours_on_slice.py
│       │   ├── count.sh
│       │   ├── custom_camera_volume_rendering.py
│       │   ├── custom_colorbar_tickmarks.ipynb
│       │   ├── custom_transfer_function_volume_rendering.py
│       │   ├── customized_phase_plot.py
│       │   ├── customized_profile_plot.py
│       │   ├── derived_field.py
│       │   ├── downsampling_amr.py
│       │   ├── extract_fixed_resolution_data.py
│       │   ├── find_clumps.py
│       │   ├── fits_radio_cubes.ipynb
│       │   ├── fits_xray_images.ipynb
│       │   ├── geographic_xforms_and_projections.ipynb
│       │   ├── global_phase_plots.py
│       │   ├── hse_field.py
│       │   ├── image_background_colors.py
│       │   ├── image_resolution.py
│       │   ├── index.rst
│       │   ├── matplotlib-animation.py
│       │   ├── multi_plot_3x2_FRB.py
│       │   ├── multi_plot_slice_and_proj.py
│       │   ├── multi_width_image.py
│       │   ├── multiplot_2x2.py
│       │   ├── multiplot_2x2_coordaxes_slice.py
│       │   ├── multiplot_2x2_time_series.py
│       │   ├── multiplot_export_to_mpl.py
│       │   ├── multiplot_phaseplot.py
│       │   ├── notebook_tutorial.rst
│       │   ├── offaxis_projection.py
│       │   ├── offaxis_projection_colorbar.py
│       │   ├── opaque_rendering.py
│       │   ├── overplot_grids.py
│       │   ├── overplot_particles.py
│       │   ├── particle_filter.py
│       │   ├── particle_filter_sfr.py
│       │   ├── particle_one_color_plot.py
│       │   ├── particle_xvz_plot.py
│       │   ├── particle_xy_plot.py
│       │   ├── power_spectrum_example.py
│       │   ├── profile_with_standard_deviation.py
│       │   ├── rad_velocity.py
│       │   ├── radial_profile_styles.py
│       │   ├── render_two_fields.py
│       │   ├── render_two_fields_tf.py
│       │   ├── rendering_with_box_and_grids.py
│       │   ├── show_hide_axes_colorbar.py
│       │   ├── sigma_clip.py
│       │   ├── simple_1d_line_plot.py
│       │   ├── simple_contour_in_slice.py
│       │   ├── simple_off_axis_projection.py
│       │   ├── simple_off_axis_slice.py
│       │   ├── simple_pdf.py
│       │   ├── simple_phase.py
│       │   ├── simple_plots.rst
│       │   ├── simple_profile.py
│       │   ├── simple_projection.py
│       │   ├── simple_projection_methods.py
│       │   ├── simple_projection_stddev.py
│       │   ├── simple_projection_weighted.py
│       │   ├── simple_radial_profile.py
│       │   ├── simple_slice.py
│       │   ├── simple_slice_matplotlib_example.py
│       │   ├── simple_slice_with_multiple_fields.py
│       │   ├── simple_volume_rendering.py
│       │   ├── simulation_analysis.py
│       │   ├── streamlines.py
│       │   ├── streamlines_isocontour.py
│       │   ├── sum_mass_in_sphere.py
│       │   ├── surface_plot.py
│       │   ├── tests/
│       │   │   └── test_cookbook.py
│       │   ├── thin_slice_projection.py
│       │   ├── time_series.py
│       │   ├── time_series_profiles.py
│       │   ├── tipsy_and_yt.ipynb
│       │   ├── various_lens.py
│       │   ├── velocity_vectors_on_slice.py
│       │   ├── vol-annotated.py
│       │   ├── vol-lines.py
│       │   ├── vol-points.py
│       │   ├── yt_gadget_analysis.ipynb
│       │   ├── yt_gadget_owls_analysis.ipynb
│       │   └── zoomin_frames.py
│       ├── developing/
│       │   ├── building_the_docs.rst
│       │   ├── creating_datatypes.rst
│       │   ├── creating_derived_fields.rst
│       │   ├── creating_frontend.rst
│       │   ├── debugdrive.rst
│       │   ├── deprecating_features.rst
│       │   ├── developing.rst
│       │   ├── extensions.rst
│       │   ├── external_analysis.rst
│       │   ├── index.rst
│       │   ├── releasing.rst
│       │   └── testing.rst
│       ├── examining/
│       │   ├── Loading_Data_via_Functions.ipynb
│       │   ├── Loading_Generic_Array_Data.ipynb
│       │   ├── Loading_Generic_Particle_Data.ipynb
│       │   ├── Loading_Spherical_Data.ipynb
│       │   ├── index.rst
│       │   ├── loading_data.rst
│       │   └── low_level_inspection.rst
│       ├── faq/
│       │   └── index.rst
│       ├── help/
│       │   └── index.rst
│       ├── index.rst
│       ├── installing.rst
│       ├── intro/
│       │   └── index.rst
│       ├── quickstart/
│       │   ├── 1)_Introduction.ipynb
│       │   ├── 2)_Data_Inspection.ipynb
│       │   ├── 3)_Simple_Visualization.ipynb
│       │   ├── 4)_Data_Objects_and_Time_Series.ipynb
│       │   ├── 5)_Derived_Fields_and_Profiles.ipynb
│       │   ├── 6)_Volume_Rendering.ipynb
│       │   └── index.rst
│       ├── reference/
│       │   ├── api/
│       │   │   └── api.rst
│       │   ├── changelog.rst
│       │   ├── code_support.rst
│       │   ├── command-line.rst
│       │   ├── configuration.rst
│       │   ├── demeshening.rst
│       │   ├── field_list.rst
│       │   ├── index.rst
│       │   └── python_introduction.rst
│       ├── visualizing/
│       │   ├── FITSImageData.ipynb
│       │   ├── TransferFunctionHelper_Tutorial.ipynb
│       │   ├── Volume_Rendering_Tutorial.ipynb
│       │   ├── callbacks.rst
│       │   ├── colormaps/
│       │   │   ├── cmap_images.py
│       │   │   └── index.rst
│       │   ├── geographic_projections_and_transforms.rst
│       │   ├── index.rst
│       │   ├── interactive_data_visualization.rst
│       │   ├── manual_plotting.rst
│       │   ├── mapserver.rst
│       │   ├── plots.rst
│       │   ├── sketchfab.rst
│       │   ├── streamlines.rst
│       │   ├── unstructured_mesh_rendering.rst
│       │   ├── visualizing_particle_datasets_with_firefly.rst
│       │   └── volume_rendering.rst
│       ├── yt3differences.rst
│       └── yt4differences.rst
├── nose_answer.cfg
├── nose_ignores
├── nose_unit.cfg
├── pyproject.toml
├── setup.py
├── setupext.py
├── tests/
│   ├── DD0000/
│   │   ├── moving7_0000
│   │   ├── moving7_0000.boundary
│   │   ├── moving7_0000.boundary.hdf
│   │   ├── moving7_0000.grid0001
│   │   ├── moving7_0000.grid0002
│   │   ├── moving7_0000.grid0003
│   │   └── moving7_0000.hierarchy
│   ├── DD0010/
│   │   ├── moving7_0010
│   │   ├── moving7_0010.boundary
│   │   ├── moving7_0010.boundary.hdf
│   │   ├── moving7_0010.cpu0000
│   │   ├── moving7_0010.hierarchy
│   │   └── moving7_0010.procmap
│   ├── README
│   ├── ci_install.sh
│   ├── local001.bak
│   ├── local001.dir
│   ├── matplotlibrc
│   ├── nose_runner.py
│   ├── pytest_runner.py
│   ├── report_failed_answers.py
│   ├── tests.yaml
│   └── unpin_requirements.py
└── yt/
    ├── __init__.py
    ├── _maintenance/
    │   ├── __init__.py
    │   ├── backports.py
    │   ├── deprecation.py
    │   ├── ipython_compat.py
    │   └── numpy2_compat.py
    ├── _typing.py
    ├── _version.py
    ├── analysis_modules/
    │   ├── __init__.py
    │   ├── absorption_spectrum/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── cosmological_observation/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── halo_analysis/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── halo_finding/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── halo_mass_function/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── level_sets/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── particle_trajectories/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── photon_simulator/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── ppv_cube/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── radmc3d_export/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── spectral_integrator/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── star_analysis/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── sunrise_export/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   ├── sunyaev_zeldovich/
    │   │   ├── __init__.py
    │   │   └── api.py
    │   └── two_point_functions/
    │       ├── __init__.py
    │       └── api.py
    ├── api.py
    ├── arraytypes.py
    ├── config.py
    ├── data_objects/
    │   ├── __init__.py
    │   ├── analyzer_objects.py
    │   ├── api.py
    │   ├── construction_data_containers.py
    │   ├── data_containers.py
    │   ├── derived_quantities.py
    │   ├── field_data.py
    │   ├── image_array.py
    │   ├── index_subobjects/
    │   │   ├── __init__.py
    │   │   ├── grid_patch.py
    │   │   ├── octree_subset.py
    │   │   ├── particle_container.py
    │   │   ├── stretched_grid.py
    │   │   └── unstructured_mesh.py
    │   ├── level_sets/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── clump_handling.py
    │   │   ├── clump_info_items.py
    │   │   ├── clump_tools.py
    │   │   ├── clump_validators.py
    │   │   ├── contour_finder.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_clump_finding.py
    │   ├── particle_filters.py
    │   ├── particle_trajectories.py
    │   ├── particle_unions.py
    │   ├── profiles.py
    │   ├── region_expression.py
    │   ├── selection_objects/
    │   │   ├── __init__.py
    │   │   ├── boolean_operations.py
    │   │   ├── cut_region.py
    │   │   ├── data_selection_objects.py
    │   │   ├── disk.py
    │   │   ├── object_collection.py
    │   │   ├── point.py
    │   │   ├── ray.py
    │   │   ├── region.py
    │   │   ├── slices.py
    │   │   └── spheroids.py
    │   ├── static_output.py
    │   ├── tests/
    │   │   ├── __init__.py
    │   │   ├── test_add_field.py
    │   │   ├── test_bbox.py
    │   │   ├── test_boolean_regions.py
    │   │   ├── test_center_squeeze.py
    │   │   ├── test_chunking.py
    │   │   ├── test_clone.py
    │   │   ├── test_compose.py
    │   │   ├── test_connected_sets.py
    │   │   ├── test_covering_grid.py
    │   │   ├── test_cut_region_chaining.py
    │   │   ├── test_cutting_plane.py
    │   │   ├── test_data_collection.py
    │   │   ├── test_data_containers.py
    │   │   ├── test_dataset_access.py
    │   │   ├── test_derived_quantities.py
    │   │   ├── test_disks.py
    │   │   ├── test_ellipsoid.py
    │   │   ├── test_exclude_functions.py
    │   │   ├── test_extract_regions.py
    │   │   ├── test_firefly.py
    │   │   ├── test_fluxes.py
    │   │   ├── test_image_array.py
    │   │   ├── test_io_geometry.py
    │   │   ├── test_numpy_ops.py
    │   │   ├── test_octree.py
    │   │   ├── test_ortho_rays.py
    │   │   ├── test_particle_filter.py
    │   │   ├── test_particle_trajectories.py
    │   │   ├── test_particle_trajectories_pytest.py
    │   │   ├── test_pickling.py
    │   │   ├── test_points.py
    │   │   ├── test_print_stats.py
    │   │   ├── test_profiles.py
    │   │   ├── test_projection.py
    │   │   ├── test_rays.py
    │   │   ├── test_refinement.py
    │   │   ├── test_regions.py
    │   │   ├── test_registration.py
    │   │   ├── test_slice.py
    │   │   ├── test_sph_data_objects.py
    │   │   ├── test_spheres.py
    │   │   ├── test_time_series.py
    │   │   └── test_units_override.py
    │   ├── time_series.py
    │   └── unions.py
    ├── default.mplstyle
    ├── extensions/
    │   └── __init__.py
    ├── exthook.py
    ├── fields/
    │   ├── __init__.py
    │   ├── angular_momentum.py
    │   ├── api.py
    │   ├── astro_fields.py
    │   ├── astro_simulations.py
    │   ├── cosmology_fields.py
    │   ├── derived_field.py
    │   ├── domain_context.py
    │   ├── field_aliases.py
    │   ├── field_detector.py
    │   ├── field_exceptions.py
    │   ├── field_functions.py
    │   ├── field_info_container.py
    │   ├── field_plugin_registry.py
    │   ├── field_type_container.py
    │   ├── fluid_fields.py
    │   ├── fluid_vector_fields.py
    │   ├── geometric_fields.py
    │   ├── interpolated_fields.py
    │   ├── local_fields.py
    │   ├── magnetic_field.py
    │   ├── my_plugin_fields.py
    │   ├── particle_fields.py
    │   ├── species_fields.py
    │   ├── tensor_fields.py
    │   ├── tests/
    │   │   ├── __init__.py
    │   │   ├── test_ambiguous_fields.py
    │   │   ├── test_angular_momentum.py
    │   │   ├── test_field_access.py
    │   │   ├── test_field_access_pytest.py
    │   │   ├── test_field_name_container.py
    │   │   ├── test_fields.py
    │   │   ├── test_fields_plugins.py
    │   │   ├── test_fields_pytest.py
    │   │   ├── test_magnetic_fields.py
    │   │   ├── test_particle_fields.py
    │   │   ├── test_species_fields.py
    │   │   ├── test_sph_fields.py
    │   │   ├── test_vector_fields.py
    │   │   └── test_xray_fields.py
    │   ├── vector_operations.py
    │   └── xray_emission_fields.py
    ├── frontends/
    │   ├── __init__.py
    │   ├── _skeleton/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── misc.py
    │   ├── adaptahop/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── ahf/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── amrex/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       ├── test_field_parsing.py
    │   │       └── test_outputs.py
    │   ├── amrvac/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── datfile_utils.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       ├── sample_parfiles/
    │   │       │   ├── bw_3d.par
    │   │       │   └── tvdlf_scheme.par
    │   │       ├── test_outputs.py
    │   │       ├── test_read_amrvac_namelist.py
    │   │       └── test_units_override.py
    │   ├── api.py
    │   ├── arepo/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── art/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── artio/
    │   │   ├── __init__.py
    │   │   ├── _artio_caller.pyx
    │   │   ├── api.py
    │   │   ├── artio_headers/
    │   │   │   ├── LICENSE
    │   │   │   ├── artio.c
    │   │   │   ├── artio.h
    │   │   │   ├── artio_endian.c
    │   │   │   ├── artio_endian.h
    │   │   │   ├── artio_file.c
    │   │   │   ├── artio_grid.c
    │   │   │   ├── artio_internal.h
    │   │   │   ├── artio_mpi.c
    │   │   │   ├── artio_mpi.h
    │   │   │   ├── artio_parameter.c
    │   │   │   ├── artio_particle.c
    │   │   │   ├── artio_posix.c
    │   │   │   ├── artio_selector.c
    │   │   │   ├── artio_sfc.c
    │   │   │   ├── cosmology.c
    │   │   │   └── cosmology.h
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── athena/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── athena_pp/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── boxlib/
    │   │   ├── __init__.py
    │   │   ├── _deprecation.py
    │   │   ├── api.py
    │   │   ├── data_structures/
    │   │   │   └── __init__.py
    │   │   ├── fields/
    │   │   │   └── __init__.py
    │   │   ├── io/
    │   │   │   └── __init__.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       ├── test_boxlib_deprecation.py
    │   │       └── test_outputs.py
    │   ├── cf_radial/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       ├── test_cf_radial_pytest.py
    │   │       └── test_outputs.py
    │   ├── chimera/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── cholla/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── chombo/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── eagle/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── enzo/
    │   │   ├── __init__.py
    │   │   ├── answer_testing_support.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   ├── simulation_handling.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── enzo_e/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       ├── test_misc.py
    │   │       └── test_outputs.py
    │   ├── exodus_ii/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   ├── simulation_handling.py
    │   │   ├── tests/
    │   │   │   ├── __init__.py
    │   │   │   └── test_outputs.py
    │   │   └── util.py
    │   ├── fits/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── flash/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── gadget/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── simulation_handling.py
    │   │   ├── testing.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       ├── test_gadget_pytest.py
    │   │       └── test_outputs.py
    │   ├── gadget_fof/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── gamer/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── cfields.pyx
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── gdf/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       ├── conftest.py
    │   │       ├── test_outputs.py
    │   │       └── test_outputs_nose.py
    │   ├── gizmo/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── fields.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── halo_catalog/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── http_stream/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   └── io.py
    │   ├── moab/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_c5.py
    │   ├── nc4_cm1/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── open_pmd/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── owls/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── owls_ion_tables.py
    │   │   ├── simulation_handling.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── owls_subfind/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── parthenon/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── ramses/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── field_handlers.py
    │   │   ├── fields.py
    │   │   ├── hilbert.py
    │   │   ├── io.py
    │   │   ├── io_utils.pyx
    │   │   ├── particle_handlers.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       ├── test_file_sanitizer.py
    │   │       ├── test_hilbert.py
    │   │       ├── test_outputs.py
    │   │       └── test_outputs_pytest.py
    │   ├── rockstar/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── sdf/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── misc.py
    │   ├── sph/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── fields.py
    │   │   └── io.py
    │   ├── stream/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   ├── misc.py
    │   │   ├── sample_data/
    │   │   │   ├── __init__.py
    │   │   │   ├── hexahedral_mesh.py
    │   │   │   └── tetrahedral_mesh.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       ├── test_callable_grids.py
    │   │       ├── test_outputs.py
    │   │       ├── test_stream_amrgrids.py
    │   │       ├── test_stream_hexahedral.py
    │   │       ├── test_stream_octree.py
    │   │       ├── test_stream_particles.py
    │   │       ├── test_stream_species.py
    │   │       ├── test_stream_stretched.py
    │   │       ├── test_stream_unstructured.py
    │   │       └── test_update_data.py
    │   ├── swift/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   ├── tipsy/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── data_structures.py
    │   │   ├── definitions.py
    │   │   ├── fields.py
    │   │   ├── io.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       └── test_outputs.py
    │   └── ytdata/
    │       ├── __init__.py
    │       ├── api.py
    │       ├── data_structures.py
    │       ├── fields.py
    │       ├── io.py
    │       ├── tests/
    │       │   ├── __init__.py
    │       │   ├── test_data_reload.py
    │       │   ├── test_old_outputs.py
    │       │   ├── test_outputs.py
    │       │   └── test_unit.py
    │       └── utilities.py
    ├── funcs.py
    ├── geometry/
    │   ├── __init__.py
    │   ├── _selection_routines/
    │   │   ├── always_selector.pxi
    │   │   ├── boolean_selectors.pxi
    │   │   ├── compose_selector.pxi
    │   │   ├── cut_region_selector.pxi
    │   │   ├── cutting_plane_selector.pxi
    │   │   ├── data_collection_selector.pxi
    │   │   ├── disk_selector.pxi
    │   │   ├── ellipsoid_selector.pxi
    │   │   ├── grid_selector.pxi
    │   │   ├── halo_particles_selector.pxi
    │   │   ├── indexed_octree_subset_selector.pxi
    │   │   ├── octree_subset_selector.pxi
    │   │   ├── ortho_ray_selector.pxi
    │   │   ├── point_selector.pxi
    │   │   ├── ray_selector.pxi
    │   │   ├── region_selector.pxi
    │   │   ├── selector_object.pxi
    │   │   ├── slice_selector.pxi
    │   │   └── sphere_selector.pxi
    │   ├── api.py
    │   ├── coordinates/
    │   │   ├── __init__.py
    │   │   ├── api.py
    │   │   ├── cartesian_coordinates.py
    │   │   ├── coordinate_handler.py
    │   │   ├── cylindrical_coordinates.py
    │   │   ├── geographic_coordinates.py
    │   │   ├── polar_coordinates.py
    │   │   ├── spec_cube_coordinates.py
    │   │   ├── spherical_coordinates.py
    │   │   └── tests/
    │   │       ├── __init__.py
    │   │       ├── test_axial_pixelization.py
    │   │       ├── test_cartesian_coordinates.py
    │   │       ├── test_cylindrical_coordinates.py
    │   │       ├── test_geographic_coordinates.py
    │   │       ├── test_polar_coordinates.py
    │   │       ├── test_sanitize_center.py
    │   │       ├── test_sph_pixelization.py
    │   │       ├── test_sph_pixelization_pytestonly.py
    │   │       └── test_spherical_coordinates.py
    │   ├── fake_octree.pyx
    │   ├── geometry_enum.py
    │   ├── geometry_handler.py
    │   ├── grid_container.pxd
    │   ├── grid_container.pyx
    │   ├── grid_geometry_handler.py
    │   ├── grid_visitors.pxd
    │   ├── grid_visitors.pyx
    │   ├── oct_container.pxd
    │   ├── oct_container.pyx
    │   ├── oct_geometry_handler.py
    │   ├── oct_visitors.pxd
    │   ├── oct_visitors.pyx
    │   ├── particle_deposit.pxd
    │   ├── particle_deposit.pyx
    │   ├── particle_geometry_handler.py
    │   ├── particle_oct_container.pyx
    │   ├── particle_smooth.pxd
    │   ├── particle_smooth.pyx
    │   ├── selection_routines.pxd
    │   ├── selection_routines.pyx
    │   ├── tests/
    │   │   ├── __init__.py
    │   │   ├── fake_octree.py
    │   │   ├── test_ewah_write_load.py
    │   │   ├── test_geometries.py
    │   │   ├── test_grid_container.py
    │   │   ├── test_grid_index.py
    │   │   ├── test_particle_deposit.py
    │   │   ├── test_particle_octree.py
    │   │   └── test_pickleable_selections.py
    │   ├── unstructured_mesh_handler.py
    │   └── vectorized_ops.h
    ├── loaders.py
    ├── py.typed
    ├── sample_data/
    │   ├── __init__.py
    │   └── api.py
    ├── sample_data_registry.json
    ├── startup_tasks.py
    ├── test_fake_amr_ds_particle_positions_within_domain.py
    ├── testing.py
    ├── tests/
    │   ├── __init__.py
    │   ├── test_external_frontends.py
    │   ├── test_funcs.py
    │   ├── test_load_archive.py
    │   ├── test_load_errors.py
    │   ├── test_load_sample.py
    │   ├── test_testing.py
    │   └── test_version.py
    ├── units/
    │   ├── __init__.py
    │   ├── _numpy_wrapper_functions.py
    │   ├── dimensions.py
    │   ├── equivalencies.py
    │   ├── physical_constants.py
    │   ├── tests/
    │   │   ├── __init__.py
    │   │   └── test_magnetic_code_units.py
    │   ├── unit_lookup_table.py
    │   ├── unit_object.py
    │   ├── unit_registry.py
    │   ├── unit_symbols.py
    │   ├── unit_systems.py
    │   └── yt_array.py
    ├── utilities/
    │   ├── __init__.py
    │   ├── amr_kdtree/
    │   │   ├── __init__.py
    │   │   ├── amr_kdtools.py
    │   │   ├── amr_kdtree.py
    │   │   └── api.py
    │   ├── answer_testing/
    │   │   ├── __init__.py
    │   │   ├── answer_tests.py
    │   │   ├── api.py
    │   │   ├── framework.py
    │   │   ├── level_sets_tests.py
    │   │   └── testing_utilities.py
    │   ├── api.py
    │   ├── chemical_formulas.py
    │   ├── command_line.py
    │   ├── configuration_tree.py
    │   ├── configure.py
    │   ├── cosmology.py
    │   ├── cython_fortran_utils.pxd
    │   ├── cython_fortran_utils.pyx
    │   ├── decompose.py
    │   ├── definitions.py
    │   ├── exceptions.py
    │   ├── file_handler.py
    │   ├── flagging_methods.py
    │   ├── fortran_utils.py
    │   ├── grid_data_format/
    │   │   ├── __init__.py
    │   │   ├── conversion/
    │   │   │   ├── __init__.py
    │   │   │   ├── conversion_abc.py
    │   │   │   └── conversion_athena.py
    │   │   ├── docs/
    │   │   │   ├── IRATE_notes.txt
    │   │   │   └── gdf_specification.txt
    │   │   ├── scripts/
    │   │   │   ├── convert_distributed_athena.py
    │   │   │   └── convert_single_athena.py
    │   │   ├── tests/
    │   │   │   ├── __init__.py
    │   │   │   └── test_writer.py
    │   │   └── writer.py
    │   ├── hierarchy_inspection.py
    │   ├── initial_conditions.py
    │   ├── io_handler.py
    │   ├── lib/
    │   │   ├── __init__.py
    │   │   ├── _octree_raytracing.hpp
    │   │   ├── _octree_raytracing.pxd
    │   │   ├── _octree_raytracing.pyx
    │   │   ├── allocation_container.pxd
    │   │   ├── allocation_container.pyx
    │   │   ├── alt_ray_tracers.pyx
    │   │   ├── amr_kdtools.pxd
    │   │   ├── amr_kdtools.pyx
    │   │   ├── api.py
    │   │   ├── autogenerated_element_samplers.pxd
    │   │   ├── autogenerated_element_samplers.pyx
    │   │   ├── basic_octree.pyx
    │   │   ├── bitarray.pxd
    │   │   ├── bitarray.pyx
    │   │   ├── bounded_priority_queue.pxd
    │   │   ├── bounded_priority_queue.pyx
    │   │   ├── bounding_volume_hierarchy.pxd
    │   │   ├── bounding_volume_hierarchy.pyx
    │   │   ├── contour_finding.pxd
    │   │   ├── contour_finding.pyx
    │   │   ├── cosmology_time.pyx
    │   │   ├── cykdtree/
    │   │   │   ├── __init__.py
    │   │   │   ├── c_kdtree.cpp
    │   │   │   ├── c_kdtree.hpp
    │   │   │   ├── c_utils.cpp
    │   │   │   ├── c_utils.hpp
    │   │   │   ├── kdtree.pxd
    │   │   │   ├── kdtree.pyx
    │   │   │   ├── plot.py
    │   │   │   ├── tests/
    │   │   │   │   ├── __init__.py
    │   │   │   │   ├── scaling.py
    │   │   │   │   ├── test_kdtree.py
    │   │   │   │   ├── test_plot.py
    │   │   │   │   └── test_utils.py
    │   │   │   ├── utils.pxd
    │   │   │   ├── utils.pyx
    │   │   │   └── windows/
    │   │   │       └── stdint.h
    │   │   ├── cyoctree.pyx
    │   │   ├── depth_first_octree.pyx
    │   │   ├── distance_queue.pxd
    │   │   ├── distance_queue.pyx
    │   │   ├── element_mappings.pxd
    │   │   ├── element_mappings.pyx
    │   │   ├── embree_mesh/
    │   │   │   ├── __init__.py
    │   │   │   ├── mesh_construction.pxd
    │   │   │   ├── mesh_construction.pyx
    │   │   │   ├── mesh_intersection.pxd
    │   │   │   ├── mesh_intersection.pyx
    │   │   │   ├── mesh_samplers.pxd
    │   │   │   ├── mesh_samplers.pyx
    │   │   │   ├── mesh_traversal.pxd
    │   │   │   └── mesh_traversal.pyx
    │   │   ├── endian_swap.h
    │   │   ├── field_interpolation_tables.pxd
    │   │   ├── fixed_interpolator.cpp
    │   │   ├── fixed_interpolator.hpp
    │   │   ├── fixed_interpolator.pxd
    │   │   ├── fnv_hash.pxd
    │   │   ├── fnv_hash.pyx
    │   │   ├── fortran_reader.pyx
    │   │   ├── fp_utils.pxd
    │   │   ├── geometry_utils.pxd
    │   │   ├── geometry_utils.pyx
    │   │   ├── grid_traversal.pxd
    │   │   ├── grid_traversal.pyx
    │   │   ├── healpix_interface.pxd
    │   │   ├── image_samplers.pxd
    │   │   ├── image_samplers.pyx
    │   │   ├── image_utilities.pyx
    │   │   ├── interpolators.pyx
    │   │   ├── lenses.pxd
    │   │   ├── lenses.pyx
    │   │   ├── marching_cubes.h
    │   │   ├── marching_cubes.pyx
    │   │   ├── mesh_triangulation.h
    │   │   ├── mesh_triangulation.pyx
    │   │   ├── mesh_utilities.pyx
    │   │   ├── misc_utilities.pyx
    │   │   ├── octree_raytracing.py
    │   │   ├── origami.pyx
    │   │   ├── origami_tags.c
    │   │   ├── origami_tags.h
    │   │   ├── particle_kdtree_tools.pxd
    │   │   ├── particle_kdtree_tools.pyx
    │   │   ├── particle_mesh_operations.pyx
    │   │   ├── partitioned_grid.pxd
    │   │   ├── partitioned_grid.pyx
    │   │   ├── pixelization_constants.cpp
    │   │   ├── pixelization_constants.hpp
    │   │   ├── pixelization_routines.pyx
    │   │   ├── platform_dep.h
    │   │   ├── platform_dep_math.hpp
    │   │   ├── points_in_volume.pyx
    │   │   ├── primitives.pxd
    │   │   ├── primitives.pyx
    │   │   ├── quad_tree.pyx
    │   │   ├── ragged_arrays.pyx
    │   │   ├── tests/
    │   │   │   ├── __init__.py
    │   │   │   ├── test_allocation_container.py
    │   │   │   ├── test_alt_ray_tracers.py
    │   │   │   ├── test_bitarray.py
    │   │   │   ├── test_bounding_volume_hierarchy.py
    │   │   │   ├── test_element_mappings.py
    │   │   │   ├── test_fill_region.py
    │   │   │   ├── test_geometry_utils.py
    │   │   │   ├── test_nn.py
    │   │   │   ├── test_ragged_arrays.py
    │   │   │   └── test_sample.py
    │   │   ├── tsearch.c
    │   │   ├── tsearch.h
    │   │   ├── vec3_ops.pxd
    │   │   ├── volume_container.pxd
    │   │   └── write_array.pyx
    │   ├── linear_interpolators.py
    │   ├── lodgeit.py
    │   ├── logger.py
    │   ├── math_utils.py
    │   ├── mesh_code_generation.py
    │   ├── mesh_types.yaml
    │   ├── metadata.py
    │   ├── minimal_representation.py
    │   ├── nodal_data_utils.py
    │   ├── object_registries.py
    │   ├── on_demand_imports.py
    │   ├── operator_registry.py
    │   ├── orientation.py
    │   ├── parallel_tools/
    │   │   ├── __init__.py
    │   │   ├── controller_system.py
    │   │   ├── io_runner.py
    │   │   ├── parallel_analysis_interface.py
    │   │   └── task_queue.py
    │   ├── parameter_file_storage.py
    │   ├── particle_generator.py
    │   ├── performance_counters.py
    │   ├── periodic_table.py
    │   ├── physical_constants.py
    │   ├── physical_ratios.py
    │   ├── png_writer.py
    │   ├── rpdb.py
    │   ├── sdf.py
    │   ├── tests/
    │   │   ├── __init__.py
    │   │   ├── cosmology_answers.yml
    │   │   ├── test_amr_kdtree.py
    │   │   ├── test_chemical_formulas.py
    │   │   ├── test_config.py
    │   │   ├── test_coordinate_conversions.py
    │   │   ├── test_cosmology.py
    │   │   ├── test_cython_fortran_utils.py
    │   │   ├── test_decompose.py
    │   │   ├── test_flagging_methods.py
    │   │   ├── test_hierarchy_inspection.py
    │   │   ├── test_interpolators.py
    │   │   ├── test_minimal_representation.py
    │   │   ├── test_on_demand_imports.py
    │   │   ├── test_particle_generator.py
    │   │   ├── test_periodic_table.py
    │   │   ├── test_periodicity.py
    │   │   ├── test_selectors.py
    │   │   └── test_set_log_level.py
    │   ├── tree_container.py
    │   └── voropp.pyx
    └── visualization/
        ├── __init__.py
        ├── _colormap_data.py
        ├── _commons.py
        ├── _handlers.py
        ├── api.py
        ├── base_plot_types.py
        ├── color_maps.py
        ├── eps_writer.py
        ├── fits_image.py
        ├── fixed_resolution.py
        ├── fixed_resolution_filters.py
        ├── geo_plot_utils.py
        ├── image_writer.py
        ├── line_plot.py
        ├── mapserver/
        │   ├── __init__.py
        │   ├── html/
        │   │   ├── Leaflet.Coordinates-0.1.5.css
        │   │   ├── Leaflet.Coordinates-0.1.5.src.js
        │   │   ├── __init__.py
        │   │   ├── map.js
        │   │   └── map_index.html
        │   └── pannable_map.py
        ├── particle_plots.py
        ├── plot_container.py
        ├── plot_modifications.py
        ├── plot_window.py
        ├── profile_plotter.py
        ├── streamlines.py
        ├── tests/
        │   ├── __init__.py
        │   ├── test_base_plot_types.py
        │   ├── test_callbacks.py
        │   ├── test_callbacks_geographic.py
        │   ├── test_color_maps.py
        │   ├── test_commons.py
        │   ├── test_eps_writer.py
        │   ├── test_export_frb.py
        │   ├── test_filters.py
        │   ├── test_fits_image.py
        │   ├── test_geo_projections.py
        │   ├── test_image_comp_2D_plots.py
        │   ├── test_image_comp_geo.py
        │   ├── test_image_writer.py
        │   ├── test_invalid_origin.py
        │   ├── test_line_annotation_unit.py
        │   ├── test_line_plots.py
        │   ├── test_mesh_slices.py
        │   ├── test_normal_plot_api.py
        │   ├── test_offaxisprojection.py
        │   ├── test_offaxisprojection_pytestonly.py
        │   ├── test_particle_plot.py
        │   ├── test_plot_modifications.py
        │   ├── test_plotwindow.py
        │   ├── test_profile_plots.py
        │   ├── test_raw_field_slices.py
        │   ├── test_save.py
        │   ├── test_set_zlim.py
        │   └── test_splat.py
        └── volume_rendering/
            ├── UBVRI.py
            ├── __init__.py
            ├── _cuda_caster.cu
            ├── api.py
            ├── blenders.py
            ├── camera.py
            ├── camera_path.py
            ├── create_spline.py
            ├── image_handling.py
            ├── lens.py
            ├── off_axis_projection.py
            ├── old_camera.py
            ├── render_source.py
            ├── scene.py
            ├── tests/
            │   ├── __init__.py
            │   ├── test_camera_attributes.py
            │   ├── test_composite.py
            │   ├── test_lenses.py
            │   ├── test_mesh_render.py
            │   ├── test_off_axis_SPH.py
            │   ├── test_points.py
            │   ├── test_save_render.py
            │   ├── test_scene.py
            │   ├── test_sigma_clip.py
            │   ├── test_simple_vr.py
            │   ├── test_varia.py
            │   ├── test_vr_cameras.py
            │   ├── test_vr_orientation.py
            │   └── test_zbuff.py
            ├── transfer_function_helper.py
            ├── transfer_functions.py
            ├── utils.py
            ├── volume_rendering.py
            └── zbuffer_array.py

SYMBOL INDEX (7158 symbols across 588 files)

FILE: conftest.py
  function pytest_addoption (line 40) | def pytest_addoption(parser):
  function pytest_configure (line 83) | def pytest_configure(config):
  function pytest_collection_modifyitems (line 189) | def pytest_collection_modifyitems(config, items):
  function pytest_itemcollected (line 219) | def pytest_itemcollected(item):
  function _param_list (line 229) | def _param_list(request):
  function _get_answer_files (line 263) | def _get_answer_files(request):
  function hashing (line 302) | def hashing(request):
  function temp_dir (line 367) | def temp_dir():
  function ds (line 384) | def ds(request):
  function field (line 402) | def field(request):
  function dobj (line 411) | def dobj(request):
  function axis (line 420) | def axis(request):
  function weight (line 429) | def weight(request):
  function ds_repr (line 438) | def ds_repr(request):
  function Npart (line 447) | def Npart(request):

FILE: doc/extensions/config_help.py
  function setup (line 8) | def setup(app):
  class GetConfigHelp (line 19) | class GetConfigHelp(Directive):
    method run (line 24) | def run(self):

FILE: doc/extensions/pythonscript_sphinxext.py
  class PythonScriptDirective (line 14) | class PythonScriptDirective(Directive):
    method run (line 27) | def run(self):
  function setup (line 71) | def setup(app):
  function get_image_tag (line 82) | def get_image_tag(filename, image_dir, image_rel_dir):
  function make_image_dir (line 89) | def make_image_dir(setup, rst_dir):
  function thread_safe_mkdir (line 97) | def thread_safe_mkdir(dirname):

FILE: doc/extensions/yt_colormaps.py
  function setup (line 15) | def setup(app):
  class ColormapScript (line 26) | class ColormapScript(Directive):
    method run (line 30) | def run(self):

FILE: doc/extensions/yt_cookbook.py
  function setup (line 15) | def setup(app):
  class CookbookScript (line 29) | class CookbookScript(Directive):
    method run (line 33) | def run(self):

FILE: doc/extensions/yt_showfields.py
  function setup (line 7) | def setup(app):
  class ShowFields (line 18) | class ShowFields(Directive):
    method run (line 24) | def run(self):

FILE: doc/helper_scripts/code_support.py
  class CodeSupport (line 13) | class CodeSupport:
    method __init__ (line 14) | def __init__(self, **kwargs):

FILE: doc/helper_scripts/parse_cb_list.py
  function write_docstring (line 23) | def write_docstring(f, name, cls):

FILE: doc/helper_scripts/parse_dq_list.py
  function write_docstring (line 22) | def write_docstring(f, name, func):

FILE: doc/helper_scripts/parse_object_list.py
  function write_docstring (line 21) | def write_docstring(f, name, cls):

FILE: doc/helper_scripts/run_recipes.py
  function prep_dirs (line 31) | def prep_dirs():
  function run_recipe (line 36) | def run_recipe(payload):

FILE: doc/helper_scripts/show_fields.py
  function _strip_ftype (line 31) | def _strip_ftype(field):
  function fix_units (line 133) | def fix_units(units, in_cgs=False):
  function print_all_fields (line 141) | def print_all_fields(fl):
  class FieldInfo (line 190) | class FieldInfo:
    method __init__ (line 193) | def __init__(self, ftype, field, ptype):

FILE: doc/source/analyzing/_static/axes.c
  function calculate_axes (line 3) | void calculate_axes(ParticleCollection *part,

FILE: doc/source/analyzing/_static/axes.h
  type ParticleCollection (line 1) | typedef struct structParticleCollection {

FILE: doc/source/analyzing/ionization_cube.py
  function IonizedHydrogen (line 13) | def IonizedHydrogen(data):

FILE: doc/source/conf.py
  function setup (line 264) | def setup(app):

FILE: doc/source/cookbook/derived_field.py
  function thermal_energy_dens (line 12) | def thermal_energy_dens(data):

FILE: doc/source/cookbook/hse_field.py
  function _hse (line 18) | def _hse(data):

FILE: doc/source/cookbook/matplotlib-animation.py
  function animate (line 16) | def animate(i):

FILE: doc/source/cookbook/particle_filter.py
  function stars_10Myr (line 11) | def stars_10Myr(pfilter, data):
  function stars_100Myr (line 17) | def stars_100Myr(pfilter, data):
  function stars_old (line 23) | def stars_old(pfilter, data):

FILE: doc/source/cookbook/particle_filter_sfr.py
  function formed_star (line 8) | def formed_star(pfilter, data):

FILE: doc/source/cookbook/power_spectrum_example.py
  function doit (line 28) | def doit(ds):
  function fft_comp (line 92) | def fft_comp(ds, irho, iu, nindex_rho, level, low, delta):

FILE: doc/source/cookbook/tests/test_cookbook.py
  function test_recipe (line 23) | def test_recipe():
  function check_recipe (line 33) | def check_recipe(cmd):

FILE: setup.py
  class BinaryDistribution (line 93) | class BinaryDistribution(Distribution):
    method has_ext_modules (line 96) | def has_ext_modules(self):

FILE: setupext.py
  function stdchannel_redirected (line 35) | def stdchannel_redirected(stdchannel, dest_filename):
  function check_for_openmp (line 61) | def check_for_openmp():
  function check_CPP14_flag (line 159) | def check_CPP14_flag(compile_flags):
  function check_CPP14_flags (line 202) | def check_CPP14_flags(possible_compile_flags):
  function check_for_pyembree (line 214) | def check_for_pyembree(std_libs):
  function in_conda_env (line 245) | def in_conda_env():
  function read_embree_location (line 249) | def read_embree_location():
  function get_cpu_count (line 334) | def get_cpu_count():
  function install_ccompiler (line 350) | def install_ccompiler():
  function get_python_include_dirs (line 381) | def get_python_include_dirs():
  function create_build_ext (line 413) | def create_build_ext(lib_exts, cythonize_aliases):
  function get_setup_options (line 495) | def get_setup_options():

FILE: tests/nose_runner.py
  class NoseWorker (line 15) | class NoseWorker(multiprocessing.Process):
    method __init__ (line 16) | def __init__(self, task_queue, result_queue):
    method run (line 21) | def run(self):
  class NoseTask (line 39) | class NoseTask:
    method __init__ (line 40) | def __init__(self, job):
    method __call__ (line 46) | def __call__(self):
    method __str__ (line 62) | def __str__(self):
  function generate_tasks_input (line 66) | def generate_tasks_input():

FILE: tests/report_failed_answers.py
  function generate_failed_answers_html (line 32) | def generate_failed_answers_html(failed_answers):
  function upload_to_curldrop (line 113) | def upload_to_curldrop(data, filename):
  function upload_failed_answers (line 145) | def upload_failed_answers(failed_answers):
  function generate_answers (line 171) | def generate_answers(answer_dir, answers):
  function upload_answers (line 214) | def upload_answers(answers):
  function extract_image_locations (line 254) | def extract_image_locations(error_string):
  function parse_nose_xml (line 300) | def parse_nose_xml(nose_xml):
  function handle_error (line 352) | def handle_error(error, testcase, missing_errors, missing_answers, faile...

FILE: tests/unpin_requirements.py
  function unpin_requirements (line 21) | def unpin_requirements(requirements: list[str]) -> list[str]:

FILE: yt/__init__.py
  function run_nose (line 94) | def run_nose(*args, **kwargs):

FILE: yt/_maintenance/backports.py
  class ReprEnum (line 29) | class ReprEnum(Enum):
  class StrEnum (line 35) | class StrEnum(str, ReprEnum):
    method __new__ (line 40) | def __new__(cls, *values):
    method _generate_next_value_ (line 61) | def _generate_next_value_(name, start, count, last_values):  # noqa B902

FILE: yt/_maintenance/deprecation.py
  function issue_deprecation_warning (line 6) | def issue_deprecation_warning(
  function future_positional_only (line 47) | def future_positional_only(positions2names: dict[int, str], /, **depr_kw...

FILE: yt/_version.py
  class VersionTuple (line 13) | class VersionTuple(NamedTuple):
  function _parse_to_version_info (line 30) | def _parse_to_version_info(version_str: str) -> VersionTuple:

FILE: yt/arraytypes.py
  function blankRecordArray (line 6) | def blankRecordArray(desc, elements):

FILE: yt/config.py
  function _setup_postinit_configuration (line 77) | def _setup_postinit_configuration():

FILE: yt/data_objects/analyzer_objects.py
  class AnalysisTask (line 6) | class AnalysisTask:
    method __init_subclass__ (line 7) | def __init_subclass__(cls, *args, **kwargs):
    method __init__ (line 12) | def __init__(self, *args, **kwargs):
    method __repr__ (line 20) | def __repr__(self):
  function analysis_task (line 27) | def analysis_task(params=None):
  function MaximumValue (line 39) | def MaximumValue(params, data_object):
  function CurrentTimeYears (line 45) | def CurrentTimeYears(params, ds):
  class SlicePlotDataset (line 49) | class SlicePlotDataset(AnalysisTask):
    method __init__ (line 52) | def __init__(self, *args, **kwargs):
    method eval (line 58) | def eval(self, ds):
  class QuantityProxy (line 63) | class QuantityProxy(AnalysisTask):
    method __repr__ (line 67) | def __repr__(self):
    method __init__ (line 74) | def __init__(self, *args, **kwargs):
    method eval (line 78) | def eval(self, data_object):
  class ParameterValue (line 83) | class ParameterValue(AnalysisTask):
    method __init__ (line 86) | def __init__(self, parameter, cast=None):
    method eval (line 96) | def eval(self, ds):
  function create_quantity_proxy (line 100) | def create_quantity_proxy(quantity_object):

FILE: yt/data_objects/construction_data_containers.py
  class YTStreamline (line 67) | class YTStreamline(YTSelectionContainer1D):
    method __init__ (line 110) | def __init__(self, positions, length=1.0, fields=None, ds=None, **kwar...
    method _get_list_of_grids (line 126) | def _get_list_of_grids(self):
    method _get_data_from_grid (line 136) | def _get_data_from_grid(self, grid, field):
    method _get_cut_mask (line 145) | def _get_cut_mask(self, grid):
  class YTProj (line 171) | class YTProj(YTSelectionContainer2D):
    method __init__ (line 176) | def __init__(
    method blocks (line 239) | def blocks(self):
    method field (line 243) | def field(self):
    method get_data (line 246) | def get_data(self, fields=None):
    method to_pw (line 355) | def to_pw(self, fields=None, center="center", width=None, origin="cent...
    method plot (line 366) | def plot(self, fields=None):
    method _initialize_projected_units (line 389) | def _initialize_projected_units(self, fields, chunk):
  class YTParticleProj (line 420) | class YTParticleProj(YTProj):
    method __init__ (line 427) | def __init__(
    method _handle_chunk (line 454) | def _handle_chunk(self, chunk, fields, tree):
  class YTQuadTreeProj (line 458) | class YTQuadTreeProj(YTProj):
    method __init__ (line 525) | def __init__(
    method _mrep (line 557) | def _mrep(self):
    method deserialize (line 560) | def deserialize(self, fields):
    method serialize (line 579) | def serialize(self):
    method _get_tree (line 584) | def _get_tree(self, nvals):
    method _initialize_chunk (line 599) | def _initialize_chunk(self, chunk, tree):
    method _handle_chunk (line 608) | def _handle_chunk(self, chunk, fields, tree):
  class YTCoveringGrid (line 644) | class YTCoveringGrid(YTSelectionContainer3D):
    method __init__ (line 687) | def __init__(
    method get_global_startindex (line 729) | def get_global_startindex(self):
    method to_xarray (line 733) | def to_xarray(self, fields=None):
    method icoords (line 788) | def icoords(self):
    method fwidth (line 798) | def fwidth(self):
    method fcoords (line 804) | def fcoords(self):
    method ires (line 816) | def ires(self):
    method set_field_parameter (line 821) | def set_field_parameter(self, name, val):
    method _sanitize_dims (line 826) | def _sanitize_dims(self, dims):
    method _sanitize_edge (line 835) | def _sanitize_edge(self, edge):
    method _reshape_vals (line 851) | def _reshape_vals(self, arr):
    method shape (line 857) | def shape(self):
    method _setup_data_source (line 860) | def _setup_data_source(self):
    method get_bbox (line 878) | def get_bbox(self):
    method get_data (line 881) | def get_data(self, fields=None):
    method _split_fields (line 939) | def _split_fields(self, fields_to_get):
    method _fill_particles (line 960) | def _fill_particles(self, part):
    method _check_sph_type (line 964) | def _check_sph_type(self, finfo):
    method _fill_sph_particles (line 998) | def _fill_sph_particles(self, fields):
    method _fill_fields (line 1107) | def _fill_fields(self, fields):
    method _generate_container_field (line 1142) | def _generate_container_field(self, field):
    method LeftEdge (line 1174) | def LeftEdge(self):
    method RightEdge (line 1178) | def RightEdge(self):
    method deposit (line 1181) | def deposit(self, positions, fields=None, method=None, kernel_name="cu...
    method write_to_gdf (line 1200) | def write_to_gdf(self, gdf_path, fields, nprocs=1, field_units=None, *...
    method _get_grid_bounds_size (line 1250) | def _get_grid_bounds_size(self):
    method to_fits_data (line 1264) | def to_fits_data(self, fields, length_unit=None):
  class YTArbitraryGrid (line 1288) | class YTArbitraryGrid(YTCoveringGrid):
    method __init__ (line 1326) | def __init__(self, left_edge, right_edge, dims, ds=None, field_paramet...
    method _fill_fields (line 1341) | def _fill_fields(self, fields):
    method _get_grid_bounds_size (line 1364) | def _get_grid_bounds_size(self):
  class LevelState (line 1377) | class LevelState:
  class YTSmoothedCoveringGrid (line 1397) | class YTSmoothedCoveringGrid(YTCoveringGrid):
    method __init__ (line 1429) | def __init__(self, *args, **kwargs):
    method _setup_data_source (line 1438) | def _setup_data_source(self, level_state=None):
    method _compute_minimum_level (line 1459) | def _compute_minimum_level(self):
    method _fill_fields (line 1492) | def _fill_fields(self, fields):
    method _initialize_level_state (line 1548) | def _initialize_level_state(self, fields):
    method _minimal_box (line 1577) | def _minimal_box(self, dds):
    method _update_level_state (line 1597) | def _update_level_state(self, level_state):
  class YTSurface (line 1627) | class YTSurface(YTSelectionContainer3D):
    method __init__ (line 1679) | def __init__(self, data_source, surface_field, field_value, ds=None):
    method _generate_container_field (line 1695) | def _generate_container_field(self, field):
    method get_data (line 1699) | def get_data(self, fields=None, sample_type="face", no_ghost=False):
    method _extract_isocontours_from_grid (line 1739) | def _extract_isocontours_from_grid(
    method calculate_flux (line 1763) | def calculate_flux(self, field_x, field_y, field_z, fluxing_field=None):
    method _calculate_flux_in_grid (line 1832) | def _calculate_flux_in_grid(
    method vertices (line 1871) | def vertices(self):
    method triangles (line 1877) | def triangles(self):
    method surface_area (line 1888) | def surface_area(self):
    method export_obj (line 1901) | def export_obj(
    method _color_samples_obj (line 2039) | def _color_samples_obj(
    method _export_obj (line 2112) | def _export_obj(
    method export_blender (line 2244) | def export_blender(
    method _export_blender (line 2370) | def _export_blender(
    method export_ply (line 2445) | def export_ply(
    method _color_samples (line 2513) | def _color_samples(
    method _export_ply (line 2547) | def _export_ply(
    method export_sketchfab (line 2657) | def export_sketchfab(
    method _upload_to_sketchfab (line 2781) | def _upload_to_sketchfab(self, data, files):
  class YTOctree (line 2810) | class YTOctree(YTSelectionContainer3D):
    method __init__ (line 2860) | def __init__(
    method _generate_tree (line 2883) | def _generate_tree(self):
    method tree (line 2925) | def tree(self):
    method sph_smoothing_style (line 2936) | def sph_smoothing_style(self):
    method sph_normalize (line 2941) | def sph_normalize(self):
    method sph_num_neighbors (line 2946) | def sph_num_neighbors(self):
    method _sanitize_ptypes (line 2950) | def _sanitize_ptypes(self, ptypes):
    method _setup_data_source (line 2965) | def _setup_data_source(self):
    method _sanitize_edge (line 2977) | def _sanitize_edge(self, edge, default):
    method get_data (line 2994) | def get_data(self, fields=None):
    method _gather_smooth (line 3023) | def _gather_smooth(self, fields, units, normalize):
    method _scatter_smooth (line 3056) | def _scatter_smooth(self, fields, units, normalize):

FILE: yt/data_objects/data_containers.py
  function sanitize_weight_field (line 35) | def sanitize_weight_field(ds, field, weight):
  function _get_ipython_key_completion (line 51) | def _get_ipython_key_completion(ds):
  class YTDataContainer (line 60) | class YTDataContainer(abc.ABC):
    method __init__ (line 78) | def __init__(self, ds: Optional["Dataset"], field_parameters) -> None:
    method __init_subclass__ (line 121) | def __init_subclass__(cls, *args, **kwargs):
    method pf (line 128) | def pf(self):
    method index (line 132) | def index(self):
    method _debug (line 138) | def _debug(self):
    method _set_default_field_parameters (line 148) | def _set_default_field_parameters(self):
    method _is_default_field_parameter (line 153) | def _is_default_field_parameter(self, parameter):
    method apply_units (line 161) | def apply_units(self, arr, units):
    method _first_matching_field (line 168) | def _first_matching_field(self, field: FieldName) -> FieldKey:
    method _set_center (line 175) | def _set_center(self, center):
    method get_field_parameter (line 184) | def get_field_parameter(self, name, default=None):
    method set_field_parameter (line 194) | def set_field_parameter(self, name, val):
    method has_field_parameter (line 201) | def has_field_parameter(self, name):
    method clear_data (line 207) | def clear_data(self, fields: list[AnyFieldKey] | AnyFieldKey | None = ...
    method has_key (line 226) | def has_key(self, key):
    method keys (line 232) | def keys(self):
    method _reshape_vals (line 235) | def _reshape_vals(self, arr):
    method __getitem__ (line 238) | def __getitem__(self, key):
    method _ipython_key_completions_ (line 260) | def _ipython_key_completions_(self):
    method __setitem__ (line 263) | def __setitem__(self, key, val):
    method __delitem__ (line 269) | def __delitem__(self, key):
    method get_bbox (line 278) | def get_bbox(self) -> tuple[unyt_array, unyt_array]:
    method _generate_field (line 284) | def _generate_field(self, field):
    method _generate_fluid_field (line 298) | def _generate_fluid_field(self, field):
    method _generate_spatial_fluid (line 314) | def _generate_spatial_fluid(self, field, ngz):
    method _generate_particle_field (line 364) | def _generate_particle_field(self, field):
    method _count_particles (line 399) | def _count_particles(self, ftype):
    method _generate_container_field (line 414) | def _generate_container_field(self, field):
    method _parameter_iterate (line 417) | def _parameter_iterate(self, seq):
    method write_out (line 424) | def write_out(self, filename, fields=None, format="%0.16e"):
    method to_dataframe (line 488) | def to_dataframe(self, fields):
    method to_astropy_table (line 520) | def to_astropy_table(self, fields):
    method save_as_dataset (line 548) | def save_as_dataset(self, filename=None, fields=None):
    method create_firefly_object (line 660) | def create_firefly_object(
    method argmax (line 913) | def argmax(self, field, axis=None):
    method argmin (line 959) | def argmin(self, field, axis=None):
    method _compute_extrema (line 1005) | def _compute_extrema(self, field):
    method max (line 1017) | def max(self, field, axis=None):
    method min (line 1052) | def min(self, field, axis=None):
    method std (line 1087) | def std(self, field, axis=None, weight=None):
    method ptp (line 1124) | def ptp(self, field):
    method profile (line 1147) | def profile(
    method mean (line 1245) | def mean(self, field, axis=None, weight=None):
    method sum (line 1286) | def sum(self, field, axis=None):
    method integrate (line 1323) | def integrate(self, field, weight=None, axis=None, *, moment=1):
    method _hash (line 1363) | def _hash(self):
    method __reduce__ (line 1372) | def __reduce__(self):
    method clone (line 1380) | def clone(self):
    method __repr__ (line 1409) | def __repr__(self):
    method _field_parameter_state (line 1422) | def _field_parameter_state(self, field_parameters):
    method _field_type_state (line 1435) | def _field_type_state(self, ftype, finfo, obj=None):
    method _determine_fields (line 1449) | def _determine_fields(self, fields):
    method tiles (line 1498) | def tiles(self):
    method blocks (line 1505) | def blocks(self):
  function _get_ds_by_hash (line 1532) | def _get_ds_by_hash(hash):
  function _reconstruct_object (line 1545) | def _reconstruct_object(*args, **kwargs):

FILE: yt/data_objects/derived_quantities.py
  function get_position_fields (line 15) | def get_position_fields(field, data):
  class DerivedQuantity (line 31) | class DerivedQuantity(ParallelAnalysisInterface):
    method __init__ (line 34) | def __init__(self, data_source):
    method __init_subclass__ (line 37) | def __init_subclass__(cls, *args, **kwargs):
    method count_values (line 42) | def count_values(self, *args, **kwargs):
    method __call__ (line 45) | def __call__(self, *args, **kwargs):
    method process_chunk (line 68) | def process_chunk(self, data, *args, **kwargs):
    method reduce_intermediate (line 71) | def reduce_intermediate(self, values):
  class DerivedQuantityCollection (line 75) | class DerivedQuantityCollection:
    method __new__ (line 76) | def __new__(cls, data_source, *args, **kwargs):
    method __getitem__ (line 83) | def __getitem__(self, key):
    method keys (line 90) | def keys(self):
  class WeightedAverageQuantity (line 94) | class WeightedAverageQuantity(DerivedQuantity):
    method count_values (line 126) | def count_values(self, fields, weight):
    method __call__ (line 130) | def __call__(self, fields, weight):
    method process_chunk (line 137) | def process_chunk(self, data, fields, weight):
    method reduce_intermediate (line 142) | def reduce_intermediate(self, values):
  class TotalQuantity (line 147) | class TotalQuantity(DerivedQuantity):
    method count_values (line 165) | def count_values(self, fields):
    method __call__ (line 169) | def __call__(self, fields):
    method process_chunk (line 176) | def process_chunk(self, data, fields):
    method reduce_intermediate (line 180) | def reduce_intermediate(self, values):
  class TotalMass (line 184) | class TotalMass(TotalQuantity):
    method __call__ (line 199) | def __call__(self):
  class CenterOfMass (line 213) | class CenterOfMass(DerivedQuantity):
    method count_values (line 244) | def count_values(self, use_gas=True, use_particles=False, particle_typ...
    method process_chunk (line 258) | def process_chunk(
    method reduce_intermediate (line 279) | def reduce_intermediate(self, values):
  class BulkVelocity (line 296) | class BulkVelocity(DerivedQuantity):
    method count_values (line 327) | def count_values(self, use_gas=True, use_particles=False, particle_typ...
    method process_chunk (line 337) | def process_chunk(
    method reduce_intermediate (line 360) | def reduce_intermediate(self, values):
  class WeightedStandardDeviation (line 377) | class WeightedStandardDeviation(DerivedQuantity):
    method count_values (line 410) | def count_values(self, fields, weight):
    method __call__ (line 414) | def __call__(self, fields, weight):
    method process_chunk (line 423) | def process_chunk(self, data, fields, weight):
    method reduce_intermediate (line 438) | def reduce_intermediate(self, values):
  class AngularMomentumVector (line 461) | class AngularMomentumVector(DerivedQuantity):
    method count_values (line 502) | def count_values(self, use_gas=True, use_particles=True, particle_type...
    method process_chunk (line 519) | def process_chunk(
    method reduce_intermediate (line 552) | def reduce_intermediate(self, values):
  class Extrema (line 565) | class Extrema(DerivedQuantity):
    method count_values (line 594) | def count_values(self, fields, non_zero, *, check_finite=False):
    method __call__ (line 597) | def __call__(self, fields, non_zero=False, *, check_finite=False):
    method process_chunk (line 604) | def process_chunk(self, data, fields, non_zero, *, check_finite=False):
    method reduce_intermediate (line 622) | def reduce_intermediate(self, values):
  class SampleAtMaxFieldValues (line 630) | class SampleAtMaxFieldValues(DerivedQuantity):
    method count_values (line 653) | def count_values(self, field, sample_fields):
    method __call__ (line 657) | def __call__(self, field, sample_fields):
    method process_chunk (line 663) | def process_chunk(self, data, field, sample_fields):
    method reduce_intermediate (line 674) | def reduce_intermediate(self, values):
    method _func (line 678) | def _func(self, arr):
  class MaxLocation (line 682) | class MaxLocation(SampleAtMaxFieldValues):
    method __call__ (line 701) | def __call__(self, field):
  class SampleAtMinFieldValues (line 711) | class SampleAtMinFieldValues(SampleAtMaxFieldValues):
    method _func (line 734) | def _func(self, arr):
  class MinLocation (line 738) | class MinLocation(SampleAtMinFieldValues):
    method __call__ (line 757) | def __call__(self, field):
  class SpinParameter (line 767) | class SpinParameter(DerivedQuantity):
    method count_values (line 805) | def count_values(self, **kwargs):
    method process_chunk (line 808) | def process_chunk(
    method reduce_intermediate (line 838) | def reduce_intermediate(self, values):

FILE: yt/data_objects/field_data.py
  class YTFieldData (line 1) | class YTFieldData(dict):

FILE: yt/data_objects/image_array.py
  class ImageArray (line 8) | class ImageArray(unyt_array):
    method __new__ (line 71) | def __new__(
    method __array_finalize__ (line 87) | def __array_finalize__(self, obj):
    method write_hdf5 (line 92) | def write_hdf5(self, filename, dataset_name=None):
    method add_background_color (line 127) | def add_background_color(self, background="black", inline=True):
    method rescale (line 191) | def rescale(self, cmax=None, amax=None, inline=True):
    method write_png (line 252) | def write_png(
    method write_image (line 321) | def write_image(
    method save (line 398) | def save(self, filename, png=True, hdf5=True, dataset_name=None):
    method _clipping_value (line 426) | def _clipping_value(self, sigma_clip, im=None):

FILE: yt/data_objects/index_subobjects/grid_patch.py
  class AMRGridPatch (line 23) | class AMRGridPatch(YTSelectionContainer):
    method __init__ (line 43) | def __init__(self, id, filename=None, index=None):
    method get_global_startindex (line 55) | def get_global_startindex(self):
    method __getitem__ (line 74) | def __getitem__(self, key):
    method convert (line 89) | def convert(self, datatype):
    method shape (line 98) | def shape(self):
    method _reshape_vals (line 101) | def _reshape_vals(self, arr):
    method _generate_container_field (line 106) | def _generate_container_field(self, field):
    method _setup_dx (line 123) | def _setup_dx(self):
    method __repr__ (line 143) | def __repr__(self):
    method __int__ (line 147) | def __int__(self):
    method clear_data (line 150) | def clear_data(self):
    method _prepare_grid (line 159) | def _prepare_grid(self):
    method get_position (line 186) | def get_position(self, index):
    method _fill_child_mask (line 191) | def _fill_child_mask(self, child, mask, tofill, dlevel=1):
    method child_mask (line 208) | def child_mask(self):
    method child_indices (line 222) | def child_indices(self):
    method child_index_mask (line 226) | def child_index_mask(self):
    method retrieve_ghost_zones (line 239) | def retrieve_ghost_zones(self, n_zones, fields, all_levels=False, smoo...
    method get_vertex_centered_data (line 270) | def get_vertex_centered_data(
    method select_icoords (line 314) | def select_icoords(self, dobj):
    method select_fcoords (line 322) | def select_fcoords(self, dobj):
    method select_fwidth (line 332) | def select_fwidth(self, dobj):
    method select_ires (line 341) | def select_ires(self, dobj):
    method select_tcoords (line 349) | def select_tcoords(self, dobj):
    method smooth (line 353) | def smooth(self, *args, **kwargs):
    method particle_operation (line 356) | def particle_operation(self, *args, **kwargs):
    method deposit (line 359) | def deposit(self, positions, fields=None, method=None, kernel_name="cu...
    method select_blocks (line 383) | def select_blocks(self, selector):
    method _get_selector_mask (line 387) | def _get_selector_mask(self, selector):
    method select (line 401) | def select(self, selector, source, dest, offset):
    method count (line 416) | def count(self, selector):
    method count_particles (line 422) | def count_particles(self, selector, x, y, z):
    method select_particles (line 427) | def select_particles(self, selector, x, y, z):

FILE: yt/data_objects/index_subobjects/octree_subset.py
  function cell_count_cache (line 25) | def cell_count_cache(func):
  class OctreeSubset (line 37) | class OctreeSubset(YTSelectionContainer, abc.ABC):
    method __init__ (line 47) | def __init__(self, base_region, domain, ds, num_zones=2, num_ghost_zon...
    method oct_handler (line 62) | def oct_handler(self):
    method __getitem__ (line 66) | def __getitem__(self, key):
    method nz (line 82) | def nz(self):
    method get_bbox (line 85) | def get_bbox(self):
    method _reshape_vals (line 88) | def _reshape_vals(self, arr):
    method mask_refinement (line 109) | def mask_refinement(self, selector):
    method select_blocks (line 113) | def select_blocks(self, selector):
    method select_tcoords (line 119) | def select_tcoords(self, dobj):
    method domain_ind (line 133) | def domain_ind(self):
    method deposit (line 136) | def deposit(self, positions, fields=None, method=None, kernel_name="cu...
    method mesh_sampling_particle_field (line 208) | def mesh_sampling_particle_field(self, positions, mesh_field, lvlmax=N...
    method smooth (line 272) | def smooth(
    method particle_operation (line 392) | def particle_operation(
    method select_icoords (line 484) | def select_icoords(self, dobj):
    method select_fcoords (line 490) | def select_fcoords(self, dobj):
    method select_fwidth (line 497) | def select_fwidth(self, dobj):
    method select_ires (line 504) | def select_ires(self, dobj):
    method select (line 509) | def select(self, selector, source, dest, offset):
    method count (line 515) | def count(self, selector):
    method count_particles (line 518) | def count_particles(self, selector, x, y, z):
    method select_particles (line 523) | def select_particles(self, selector, x, y, z):
    method get_vertex_centered_data (line 527) | def get_vertex_centered_data(self, fields):
  class OctreeSubsetBlockSlicePosition (line 546) | class OctreeSubsetBlockSlicePosition:
    method __init__ (line 547) | def __init__(self, ind, block_slice):
    method __getitem__ (line 554) | def __getitem__(self, key):
    method id (line 563) | def id(self):
    method Level (line 567) | def Level(self):
    method LeftEdge (line 571) | def LeftEdge(self):
    method RightEdge (line 581) | def RightEdge(self):
    method dds (line 591) | def dds(self):
    method clear_data (line 594) | def clear_data(self):
    method get_vertex_centered_data (line 597) | def get_vertex_centered_data(self, fields, smoothed=False, no_ghost=Fa...
    method _field_parameter_state (line 603) | def _field_parameter_state(self, field_parameters):
  class OctreeSubsetBlockSlice (line 607) | class OctreeSubsetBlockSlice:
    method __init__ (line 608) | def __init__(self, octree_subset, ds):
    method octree_subset_with_gz (line 618) | def octree_subset_with_gz(self):
    method get_vertex_centered_data (line 624) | def get_vertex_centered_data(self, fields, smoothed=False, no_ghost=Fa...
    method __iter__ (line 656) | def __iter__(self):
  class YTPositionArray (line 661) | class YTPositionArray(unyt_array):
    method morton (line 663) | def morton(self):
    method to_octree (line 673) | def to_octree(self, num_zones=2, dims=(1, 1, 1), n_ref=64):
    method validate (line 687) | def validate(self):

FILE: yt/data_objects/index_subobjects/particle_container.py
  function _non_indexed (line 15) | def _non_indexed(name):
  class ParticleContainer (line 22) | class ParticleContainer(YTSelectionContainer):
    method __init__ (line 28) | def __init__(
    method __reduce__ (line 53) | def __reduce__(self):
    method selector (line 60) | def selector(self):
    method select_particles (line 63) | def select_particles(self, selector, x, y, z):
    method _expand_data_files (line 68) | def _expand_data_files(self):
    method retrieve_ghost_zones (line 78) | def retrieve_ghost_zones(self, ngz, coarse_ghosts=False):

FILE: yt/data_objects/index_subobjects/stretched_grid.py
  class StretchedGrid (line 8) | class StretchedGrid(AMRGridPatch):
    method __init__ (line 9) | def __init__(self, id, cell_widths, *, filename=None, index=None):
    method _check_consistency (line 13) | def _check_consistency(self):
    method _get_selector_mask (line 19) | def _get_selector_mask(self, selector):
    method select_fwidth (line 33) | def select_fwidth(self, dobj):
    method select_fcoords (line 48) | def select_fcoords(self, dobj):

FILE: yt/data_objects/index_subobjects/unstructured_mesh.py
  class UnstructuredMesh (line 10) | class UnstructuredMesh(YTSelectionContainer):
    method __init__ (line 19) | def __init__(
    method _check_consistency (line 39) | def _check_consistency(self):
    method __repr__ (line 50) | def __repr__(self):
    method get_global_startindex (line 53) | def get_global_startindex(self):
    method convert (line 61) | def convert(self, datatype):
    method shape (line 70) | def shape(self):
    method _generate_container_field (line 73) | def _generate_container_field(self, field):
    method select_fcoords (line 76) | def select_fcoords(self, dobj=None):
    method select_fwidth (line 86) | def select_fwidth(self, dobj):
    method select_icoords (line 89) | def select_icoords(self, dobj):
    method select_ires (line 92) | def select_ires(self, dobj):
    method select_tcoords (line 95) | def select_tcoords(self, dobj):
    method deposit (line 98) | def deposit(self, positions, fields=None, method=None, kernel_name="cu...
    method select_blocks (line 101) | def select_blocks(self, selector):
    method select (line 105) | def select(self, selector, source, dest, offset):
    method count (line 113) | def count(self, selector):
    method count_particles (line 119) | def count_particles(self, selector, x, y, z):
    method select_particles (line 124) | def select_particles(self, selector, x, y, z):
    method _get_selector_mask (line 128) | def _get_selector_mask(self, selector):
    method select_fcoords_vertex (line 140) | def select_fcoords_vertex(self, dobj=None):
  class SemiStructuredMesh (line 148) | class SemiStructuredMesh(UnstructuredMesh):
    method __repr__ (line 153) | def __repr__(self):
    method _generate_container_field (line 156) | def _generate_container_field(self, field):
    method select_fwidth (line 166) | def select_fwidth(self, dobj):
    method select_ires (line 175) | def select_ires(self, dobj):
    method select_tcoords (line 182) | def select_tcoords(self, dobj):
    method _get_selector_mask (line 189) | def _get_selector_mask(self, selector):
    method select (line 201) | def select(self, selector, source, dest, offset):

FILE: yt/data_objects/level_sets/clump_handling.py
  function add_contour_field (line 15) | def add_contour_field(ds, contour_key):
  class Clump (line 36) | class Clump(TreeContainer):
    method __init__ (line 37) | def __init__(
    method leaves (line 88) | def leaves(self):
    method add_validator (line 98) | def add_validator(self, validator, *args, **kwargs):
    method add_info_item (line 108) | def add_info_item(self, info_item, *args, **kwargs):
    method set_default_clump_info (line 117) | def set_default_clump_info(self):
    method clear_clump_info (line 136) | def clear_clump_info(self):
    method find_children (line 146) | def find_children(self, min_val, max_val=None):
    method __iter__ (line 187) | def __iter__(self):
    method save_as_dataset (line 192) | def save_as_dataset(self, filename=None, fields=None):
    method pass_down (line 372) | def pass_down(self, operation):
    method _validate (line 387) | def _validate(self):
    method __reduce__ (line 402) | def __reduce__(self):
    method __getitem__ (line 408) | def __getitem__(self, request):
  function find_clumps (line 412) | def find_clumps(clump, min_val, max_val, d_clump):

FILE: yt/data_objects/level_sets/clump_info_items.py
  function add_clump_info (line 8) | def add_clump_info(name, function):
  class ClumpInfoCallback (line 12) | class ClumpInfoCallback:
    method __init__ (line 18) | def __init__(self, name, function, args=None, kwargs=None):
    method __call__ (line 28) | def __call__(self, clump):
  function _center_of_mass (line 35) | def _center_of_mass(clump, units="code_length", **kwargs):
  function _total_cells (line 43) | def _total_cells(clump):
  function _cell_mass (line 51) | def _cell_mass(clump):
  function _mass_weighted_jeans_mass (line 59) | def _mass_weighted_jeans_mass(clump):
  function _volume_weighted_jeans_mass (line 69) | def _volume_weighted_jeans_mass(clump):
  function _max_grid_level (line 79) | def _max_grid_level(clump):
  function _min_number_density (line 87) | def _min_number_density(clump):
  function _max_number_density (line 95) | def _max_number_density(clump):
  function _distance_to_main_clump (line 103) | def _distance_to_main_clump(clump, units="pc"):

FILE: yt/data_objects/level_sets/clump_tools.py
  function recursive_all_clumps (line 8) | def recursive_all_clumps(clump, list, level, parentnumber):
  function return_all_clumps (line 24) | def return_all_clumps(clump):
  function return_bottom_clumps (line 42) | def return_bottom_clumps(clump, dbg=0):
  function recursive_bottom_clumps (line 55) | def recursive_bottom_clumps(clump, clump_list, dbg=0, level=0):
  function clump_list_sort (line 69) | def clump_list_sort(clump_list):

FILE: yt/data_objects/level_sets/clump_validators.py
  function add_validator (line 10) | def add_validator(name, function):
  class ClumpValidator (line 14) | class ClumpValidator:
    method __init__ (line 20) | def __init__(self, function, args=None, kwargs=None):
    method __call__ (line 29) | def __call__(self, clump):
  function _gravitationally_bound (line 33) | def _gravitationally_bound(
  function _min_cells (line 108) | def _min_cells(clump, n_cells):

FILE: yt/data_objects/level_sets/contour_finder.py
  function identify_contours (line 15) | def identify_contours(data_source, field, min_val, max_val, cached_field...

FILE: yt/data_objects/level_sets/tests/test_clump_finding.py
  function test_clump_finding (line 16) | def test_clump_finding():
  function test_clump_tree_save (line 95) | def test_clump_tree_save():
  function test_clump_field_parameters (line 159) | def test_clump_field_parameters():

FILE: yt/data_objects/particle_filters.py
  class DummyFieldInfo (line 12) | class DummyFieldInfo:
  class ParticleFilter (line 20) | class ParticleFilter:
    method __init__ (line 21) | def __init__(self, name, function, requires, filtered_type):
    method apply (line 28) | def apply(self, dobj):
    method available (line 47) | def available(self, field_list):
    method missing (line 53) | def missing(self, field_list):
    method wrap_func (line 60) | def wrap_func(self, field_name, old_fi):
  function add_particle_filter (line 70) | def add_particle_filter(name, function, requires=None, filtered_type="al...
  function particle_filter (line 127) | def particle_filter(name=None, requires=None, filtered_type="all"):

FILE: yt/data_objects/particle_trajectories.py
  class ParticleTrajectories (line 13) | class ParticleTrajectories:
    method __init__ (line 59) | def __init__(
    method has_key (line 149) | def has_key(self, key):
    method keys (line 152) | def keys(self):
    method __getitem__ (line 155) | def __getitem__(self, key):
    method __setitem__ (line 165) | def __setitem__(self, key, val):
    method __delitem__ (line 171) | def __delitem__(self, key):
    method __iter__ (line 177) | def __iter__(self):
    method __len__ (line 191) | def __len__(self):
    method add_fields (line 197) | def add_fields(self, fields):
    method _get_data (line 214) | def _get_data(self, fields):
    method trajectory_from_index (line 308) | def trajectory_from_index(self, index):
    method write_out (line 349) | def write_out(self, filename_base):
    method write_out_h5 (line 384) | def write_out_h5(self, filename):

FILE: yt/data_objects/profiles.py
  function _sanitize_min_max_units (line 27) | def _sanitize_min_max_units(amin, amax, finfo, registry):
  function preserve_source_parameters (line 44) | def preserve_source_parameters(func):
  class ProfileFieldAccumulator (line 64) | class ProfileFieldAccumulator:
    method __init__ (line 65) | def __init__(self, n_fields, size):
  class ProfileND (line 74) | class ProfileND(ParallelAnalysisInterface):
    method __init__ (line 77) | def __init__(self, data_source, weight_field=None):
    method add_fields (line 92) | def add_fields(self, fields):
    method set_field_unit (line 110) | def set_field_unit(self, field, new_unit):
    method _finalize_storage (line 130) | def _finalize_storage(self, fields, temp_storage):
    method _bin_chunk (line 215) | def _bin_chunk(self, chunk, fields, storage):
    method _filter (line 218) | def _filter(self, bin_fields):
    method _get_data (line 227) | def _get_data(self, chunk, fields):
    method __getitem__ (line 268) | def __getitem__(self, field):
    method items (line 291) | def items(self):
    method keys (line 294) | def keys(self):
    method __iter__ (line 297) | def __iter__(self):
    method _get_bins (line 300) | def _get_bins(self, mi, ma, n, take_log):
    method save_as_dataset (line 312) | def save_as_dataset(self, filename=None):
  class ProfileNDFromDataset (line 414) | class ProfileNDFromDataset(ProfileND):
    method __init__ (line 419) | def __init__(self, ds):
  class Profile1D (line 451) | class Profile1D(ProfileND):
    method __init__ (line 479) | def __init__(
    method _bin_chunk (line 508) | def _bin_chunk(self, chunk, fields, storage):
    method set_x_unit (line 528) | def set_x_unit(self, new_unit):
    method bounds (line 540) | def bounds(self):
    method plot (line 543) | def plot(self):
    method _export_prep (line 552) | def _export_prep(self, fields, only_used):
    method to_dataframe (line 567) | def to_dataframe(self, fields=None, only_used=False, include_std=False):
    method to_astropy_table (line 619) | def to_astropy_table(self, fields=None, only_used=False, include_std=F...
  class Profile1DFromDataset (line 679) | class Profile1DFromDataset(ProfileNDFromDataset, Profile1D):
    method __init (line 684) | def __init(self, ds):
  class Profile2D (line 688) | class Profile2D(ProfileND):
    method __init__ (line 731) | def __init__(
    method _bin_chunk (line 781) | def _bin_chunk(self, chunk, fields, storage):
    method set_x_unit (line 803) | def set_x_unit(self, new_unit):
    method set_y_unit (line 814) | def set_y_unit(self, new_unit):
    method bounds (line 826) | def bounds(self):
    method plot (line 829) | def plot(self):
  class Profile2DFromDataset (line 839) | class Profile2DFromDataset(ProfileNDFromDataset, Profile2D):
    method __init (line 844) | def __init(self, ds):
  class ParticleProfile (line 848) | class ParticleProfile(Profile2D):
    method __init__ (line 892) | def __init__(
    method _bin_chunk (line 941) | def _bin_chunk(self, chunk, fields, storage):
  class Profile3D (line 995) | class Profile3D(ProfileND):
    method __init__ (line 1053) | def __init__(
    method _bin_chunk (line 1121) | def _bin_chunk(self, chunk, fields, storage):
    method bounds (line 1147) | def bounds(self):
    method set_x_unit (line 1154) | def set_x_unit(self, new_unit):
    method set_y_unit (line 1165) | def set_y_unit(self, new_unit):
    method set_z_unit (line 1176) | def set_z_unit(self, new_unit):
  class Profile3DFromDataset (line 1188) | class Profile3DFromDataset(ProfileNDFromDataset, Profile3D):
    method __init (line 1193) | def __init(self, ds):
  function sanitize_field_tuple_keys (line 1197) | def sanitize_field_tuple_keys(input_dict, data_source):
  function create_profile (line 1207) | def create_profile(

FILE: yt/data_objects/region_expression.py
  class RegionExpression (line 16) | class RegionExpression:
    method __init__ (line 17) | def __init__(self, ds):
    method all_data (line 21) | def all_data(self):
    method __getitem__ (line 24) | def __getitem__(self, item):
    method _ipython_key_completions_ (line 87) | def _ipython_key_completions_(self):
    method _spec_to_value (line 90) | def _spec_to_value(self, input):
    method _create_slice (line 99) | def _create_slice(self, slice_tuple):
    method _slice_to_edges (line 148) | def _slice_to_edges(self, ax, val):
    method _create_region (line 161) | def _create_region(self, bounds_tuple):
    method _create_point (line 178) | def _create_point(self, point_tuple):
    method _create_ray (line 182) | def _create_ray(self, ray_slice):
    method _create_ortho_ray (line 190) | def _create_ortho_ray(self, ray_tuple):

FILE: yt/data_objects/selection_objects/boolean_operations.py
  class YTBooleanContainer (line 13) | class YTBooleanContainer(YTSelectionContainer3D):
    method __init__ (line 47) | def __init__(
    method _get_bbox (line 58) | def _get_bbox(self):
  class YTIntersectionContainer3D (line 67) | class YTIntersectionContainer3D(YTSelectionContainer3D):
    method __init__ (line 96) | def __init__(self, data_objects, ds=None, field_parameters=None, data_...
    method get_bbox (line 106) | def get_bbox(self):
  class YTDataObjectUnion (line 118) | class YTDataObjectUnion(YTSelectionContainer3D):
    method __init__ (line 147) | def __init__(self, data_objects, ds=None, field_parameters=None, data_...

FILE: yt/data_objects/selection_objects/cut_region.py
  class YTCutRegion (line 18) | class YTCutRegion(YTSelectionContainer3D):
    method __init__ (line 46) | def __init__(
    method _check_filter_fields (line 87) | def _check_filter_fields(self):
    method chunks (line 108) | def chunks(self, fields, chunking_style, **kwargs):
    method get_data (line 117) | def get_data(self, fields=None):
    method blocks (line 130) | def blocks(self):
    method _cond_ind (line 147) | def _cond_ind(self):
    method _part_ind_KDTree (line 170) | def _part_ind_KDTree(self, ptype):
    method _part_ind_brute_force (line 234) | def _part_ind_brute_force(self, ptype):
    method _part_ind (line 251) | def _part_ind(self, ptype):
    method icoords (line 262) | def icoords(self):
    method fcoords (line 266) | def fcoords(self):
    method ires (line 270) | def ires(self):
    method fwidth (line 274) | def fwidth(self):
    method _get_bbox (line 277) | def _get_bbox(self):

FILE: yt/data_objects/selection_objects/data_selection_objects.py
  class YTSelectionContainer (line 44) | class YTSelectionContainer(YTDataContainer, ParallelAnalysisInterface, a...
    method __init__ (line 54) | def __init__(self, ds, field_parameters, data_source=None):
    method selector (line 76) | def selector(self):
    method chunks (line 92) | def chunks(self, fields, chunking_style, **kwargs):
    method _identify_dependencies (line 111) | def _identify_dependencies(self, fields_to_get, spatial=False):
    method get_data (line 137) | def get_data(self, fields=None):
    method _get_bbox (line 225) | def _get_bbox(self):
    method get_bbox (line 232) | def get_bbox(self) -> tuple[unyt_array, unyt_array]:
    method _generate_fields (line 258) | def _generate_fields(self, fields_to_generate):
    method __or__ (line 339) | def __or__(self, other):
    method __invert__ (line 351) | def __invert__(self):
    method __xor__ (line 360) | def __xor__(self, other):
    method __and__ (line 371) | def __and__(self, other):
    method __add__ (line 382) | def __add__(self, other):
    method __sub__ (line 385) | def __sub__(self, other):
    method _field_lock (line 397) | def _field_lock(self):
    method _ds_hold (line 403) | def _ds_hold(self, new_ds):
    method _chunked_read (line 430) | def _chunked_read(self, chunk):
    method _activate_cache (line 450) | def _activate_cache(self):
    method _initialize_cache (line 463) | def _initialize_cache(self, cache):
    method icoords (line 469) | def icoords(self):
    method fcoords (line 475) | def fcoords(self):
    method ires (line 481) | def ires(self):
    method fwidth (line 487) | def fwidth(self):
    method fcoords_vertex (line 493) | def fcoords_vertex(self):
    method max_level (line 499) | def max_level(self):
    method max_level (line 508) | def max_level(self, value):
    method min_level (line 519) | def min_level(self):
    method min_level (line 528) | def min_level(self, value):
  class YTSelectionContainer0D (line 539) | class YTSelectionContainer0D(YTSelectionContainer):
    method __init__ (line 543) | def __init__(self, ds, field_parameters=None, data_source=None):
  class YTSelectionContainer1D (line 547) | class YTSelectionContainer1D(YTSelectionContainer):
    method __init__ (line 551) | def __init__(self, ds, field_parameters=None, data_source=None):
  class YTSelectionContainer2D (line 558) | class YTSelectionContainer2D(YTSelectionContainer):
    method __init__ (line 567) | def __init__(self, axis, ds, field_parameters=None, data_source=None):
    method _convert_field_name (line 573) | def _convert_field_name(self, field):
    method _get_pw (line 576) | def _get_pw(self, fields, center, width, origin, plot_type):
    method to_frb (line 603) | def to_frb(self, width, resolution, center=None, height=None, periodic...
  class YTSelectionContainer3D (line 699) | class YTSelectionContainer3D(YTSelectionContainer):
    method __init__ (line 711) | def __init__(self, center, ds, field_parameters=None, data_source=None):
    method cut_region (line 717) | def cut_region(self, field_cuts, field_parameters=None, locals=None):
    method _build_operator_cut (line 755) | def _build_operator_cut(self, operation, field, value, units=None):
    method _build_function_cut (line 777) | def _build_function_cut(self, function, field, units=None, **kwargs):
    method exclude_above (line 797) | def exclude_above(self, field, value, units=None):
    method include_above (line 831) | def include_above(self, field, value, units=None):
    method exclude_equal (line 865) | def exclude_equal(self, field, value, units=None):
    method include_equal (line 895) | def include_equal(self, field, value, units=None):
    method exclude_inside (line 925) | def exclude_inside(self, field, min_value, max_value, units=None):
    method include_inside (line 968) | def include_inside(self, field, min_value, max_value, units=None):
    method exclude_outside (line 1012) | def exclude_outside(self, field, min_value, max_value, units=None):
    method include_outside (line 1045) | def include_outside(self, field, min_value, max_value, units=None):
    method exclude_below (line 1078) | def exclude_below(self, field, value, units=None):
    method exclude_nan (line 1108) | def exclude_nan(self, field, units=None):
    method include_below (line 1135) | def include_below(self, field, value, units=None):
    method extract_isocontours (line 1166) | def extract_isocontours(
    method _extract_isocontours_from_grid (line 1261) | def _extract_isocontours_from_grid(
    method calculate_isocontour_flux (line 1279) | def calculate_isocontour_flux(
    method _calculate_flux_in_grid (line 1355) | def _calculate_flux_in_grid(
    method extract_connected_sets (line 1381) | def extract_connected_sets(
    method volume (line 1425) | def volume(self):

FILE: yt/data_objects/selection_objects/disk.py
  class YTDisk (line 18) | class YTDisk(YTSelectionContainer3D):
    method __init__ (line 59) | def __init__(
    method _get_bbox (line 86) | def _get_bbox(self):

FILE: yt/data_objects/selection_objects/object_collection.py
  class YTDataCollection (line 11) | class YTDataCollection(YTSelectionContainer3D):
    method __init__ (line 20) | def __init__(

FILE: yt/data_objects/selection_objects/point.py
  class YTPoint (line 10) | class YTPoint(YTSelectionContainer0D):
    method __init__ (line 42) | def __init__(self, p, ds=None, field_parameters=None, data_source=None):

FILE: yt/data_objects/selection_objects/ray.py
  class YTOrthoRay (line 23) | class YTOrthoRay(YTSelectionContainer1D):
    method __init__ (line 75) | def __init__(self, axis, coords, ds=None, field_parameters=None, data_...
    method coords (line 104) | def coords(self):
  class YTRay (line 108) | class YTRay(YTSelectionContainer1D):
    method __init__ (line 159) | def __init__(
    method _generate_container_field (line 188) | def _generate_container_field(self, field):
    method _generate_container_field_grid (line 195) | def _generate_container_field_grid(self, field):
    method _generate_container_field_sph (line 205) | def _generate_container_field_sph(self, field):

FILE: yt/data_objects/selection_objects/region.py
  class YTRegion (line 15) | class YTRegion(YTSelectionContainer3D):
    method __init__ (line 37) | def __init__(
    method _get_bbox (line 67) | def _get_bbox(self):

FILE: yt/data_objects/selection_objects/slices.py
  class YTSlice (line 24) | class YTSlice(YTSelectionContainer2D):
    method __init__ (line 69) | def __init__(
    method _generate_container_field (line 84) | def _generate_container_field(self, field):
    method _mrep (line 105) | def _mrep(self):
    method to_pw (line 108) | def to_pw(self, fields=None, center="center", width=None, origin="cent...
    method plot (line 119) | def plot(self, fields=None):
  class YTCuttingPlane (line 143) | class YTCuttingPlane(YTSelectionContainer2D):
    method __init__ (line 200) | def __init__(
    method normal (line 234) | def normal(self):
    method _generate_container_field (line 237) | def _generate_container_field(self, field):
    method to_pw (line 279) | def to_pw(self, fields=None, center="center", width=None, axes_unit=No...
    method to_frb (line 316) | def to_frb(self, width, resolution, height=None, periodic=False):

FILE: yt/data_objects/selection_objects/spheroids.py
  class YTSphere (line 23) | class YTSphere(YTSelectionContainer3D):
    method __init__ (line 49) | def __init__(
    method _get_bbox (line 64) | def _get_bbox(self):
  class YTMinimalSphere (line 71) | class YTMinimalSphere(YTSelectionContainer3D):
    method __init__ (line 93) | def __init__(self, points, ds=None, field_parameters=None, data_source...
  class YTEllipsoid (line 117) | class YTEllipsoid(YTSelectionContainer3D):
    method __init__ (line 153) | def __init__(
    method _get_bbox (line 218) | def _get_bbox(self):

FILE: yt/data_objects/static_output.py
  function _setup_ds_store (line 108) | def _setup_ds_store(ytcfg: YTConfig) -> None:
  function _unsupported_object (line 116) | def _unsupported_object(ds, obj_name):
  class MutableAttribute (line 123) | class MutableAttribute:
    method __init__ (line 126) | def __init__(self, display_array=False):
    method __get__ (line 133) | def __get__(self, instance, owner):
    method __set__ (line 136) | def __set__(self, instance, value):
  function requires_index (line 151) | def requires_index(attr_name):
  class Dataset (line 166) | class Dataset(abc.ABC):
    method __new__ (line 207) | def __new__(cls, filename=None, *args, **kwargs):
    method __init_subclass__ (line 230) | def __init_subclass__(cls, *args, **kwargs):
    method __init__ (line 242) | def __init__(
    method filename (line 323) | def filename(self):
    method parameter_filename (line 330) | def parameter_filename(self):
    method basename (line 335) | def basename(self):
    method directory (line 339) | def directory(self):
    method fullpath (line 343) | def fullpath(self):
    method backup_filename (line 354) | def backup_filename(self):
    method unique_identifier (line 359) | def unique_identifier(self) -> str:
    method periodicity (line 366) | def periodicity(self):
    method force_periodicity (line 374) | def force_periodicity(self, val=True):
    method _missing_load_requirements (line 386) | def _missing_load_requirements(cls) -> list[str]:
    method _is_valid (line 395) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
    method _parse_parameter_file (line 401) | def _parse_parameter_file(self):
    method _set_code_unit_attributes (line 408) | def _set_code_unit_attributes(self):
    method _set_derived_attrs (line 414) | def _set_derived_attrs(self):
    method __reduce__ (line 432) | def __reduce__(self):
    method __repr__ (line 436) | def __repr__(self):
    method __str__ (line 439) | def __str__(self):
    method _hash (line 442) | def _hash(self):
    method checksum (line 447) | def checksum(self):
    method _mrep (line 482) | def _mrep(self):
    method _skip_cache (line 486) | def _skip_cache(self):
    method _guess_candidates (line 490) | def _guess_candidates(cls, base, directories, files):
    method close (line 502) | def close(self):  # noqa: B027
    method __getitem__ (line 505) | def __getitem__(self, key):
    method __iter__ (line 509) | def __iter__(self):
    method get_smallest_appropriate_unit (line 512) | def get_smallest_appropriate_unit(
    method has_key (line 601) | def has_key(self, key):
    method index (line 611) | def index(self):
    method print_key_parameters (line 625) | def print_key_parameters(self):
    method print_stats (line 659) | def print_stats(self):
    method field_list (line 663) | def field_list(self):
    method field_info (line 667) | def field_info(self):
    method field_info (line 673) | def field_info(self, value):
    method create_field_info (line 676) | def create_field_info(self):
    method set_field_label_format (line 725) | def set_field_label_format(self, format_property, value):
    method setup_deprecated_fields (line 748) | def setup_deprecated_fields(self):
    method _setup_coordinate_handler (line 761) | def _setup_coordinate_handler(self, axis_order: AxisOrder | None) -> N...
    method add_particle_union (line 853) | def add_particle_union(self, union):
    method add_particle_filter (line 891) | def add_particle_filter(self, filter):
    method _setup_filtered_type (line 923) | def _setup_filtered_type(self, filter):
    method _setup_particle_types (line 970) | def _setup_particle_types(self, ptypes=None):
    method _get_field_info (line 978) | def _get_field_info(
    method _get_field_info_helper (line 1039) | def _get_field_info_helper(
    method _setup_classes (line 1078) | def _setup_classes(self):
    method _add_object_class (line 1090) | def _add_object_class(self, name, base):
    method _find_extremum (line 1102) | def _find_extremum(self, field, ext, source=None, to_array=True):
    method find_max (line 1156) | def find_max(self, field, source=None, to_array=True):
    method find_min (line 1165) | def find_min(self, field, source=None, to_array=True):
    method find_field_values_at_point (line 1174) | def find_field_values_at_point(self, fields, coords):
    method find_field_values_at_points (line 1187) | def find_field_values_at_points(self, fields, coords):
    method all_data (line 1215) | def all_data(self, find_max=False, **kwargs):
    method box (line 1227) | def box(self, left_edge, right_edge, **kwargs):
    method _setup_particle_type (line 1249) | def _setup_particle_type(self, ptype):
    method particle_fields_by_type (line 1255) | def particle_fields_by_type(self):
    method particles_exist (line 1263) | def particles_exist(self):
    method particle_type_counts (line 1270) | def particle_type_counts(self):
    method ires_factor (line 1284) | def ires_factor(self):
    method relative_refinement (line 1292) | def relative_refinement(self, l0, l1):
    method _assign_unit_system (line 1295) | def _assign_unit_system(
    method _uses_code_length_unit (line 1365) | def _uses_code_length_unit(self) -> bool:
    method _uses_code_time_unit (line 1369) | def _uses_code_time_unit(self) -> bool:
    method _create_unit_registry (line 1372) | def _create_unit_registry(self, unit_system):
    method set_units (line 1408) | def set_units(self):
    method setup_cosmology (line 1433) | def setup_cosmology(self):
    method get_unit_from_registry (line 1467) | def get_unit_from_registry(self, unit_str):
    method set_code_units (line 1481) | def set_code_units(self):
    method _validate_units_override_keys (line 1533) | def _validate_units_override_keys(cls, units_override):
    method _sanitize_units_override (line 1551) | def _sanitize_units_override(cls, units_override):
    method _override_code_units (line 1628) | def _override_code_units(self):
    method units (line 1644) | def units(self):
    method arr (line 1655) | def arr(self):
    method quan (line 1703) | def quan(self):
    method add_field (line 1748) | def add_field(
    method add_mesh_sampling_particle_field (line 1815) | def add_mesh_sampling_particle_field(self, sample_field, ptype="all"):
    method add_deposited_particle_field (line 1859) | def add_deposited_particle_field(
    method add_gradient_fields (line 1948) | def add_gradient_fields(self, fields=None):
    method max_level (line 2017) | def max_level(self):
    method max_level (line 2023) | def max_level(self, value):
    method min_level (line 2029) | def min_level(self):
    method min_level (line 2035) | def min_level(self, value):
    method define_unit (line 2038) | def define_unit(self, symbol, value, tex_repr=None, offset=None, prefi...
    method _is_within_domain (line 2072) | def _is_within_domain(self, point) -> bool:
  function _reconstruct_ds (line 2085) | def _reconstruct_ds(*args, **kwargs):
  class ParticleFile (line 2092) | class ParticleFile:
    method __init__ (line 2100) | def __init__(self, ds, io, filename, file_id, range=None):
    method select (line 2115) | def select(self, selector):  # noqa: B027
    method count (line 2118) | def count(self, selector):  # noqa: B027
    method _calculate_offsets (line 2121) | def _calculate_offsets(self, fields, pcounts):  # noqa: B027
    method __lt__ (line 2124) | def __lt__(self, other):
    method __eq__ (line 2129) | def __eq__(self, other):
    method __hash__ (line 2134) | def __hash__(self):
  class ParticleDataset (line 2138) | class ParticleDataset(Dataset):
    method __init__ (line 2143) | def __init__(

FILE: yt/data_objects/tests/test_add_field.py
  function test_add_field_lambda (line 15) | def test_add_field_lambda():
  function test_add_field_partial (line 28) | def test_add_field_partial():
  function test_add_field_arbitrary_callable (line 44) | def test_add_field_arbitrary_callable():
  function test_add_field_uncallable (line 57) | def test_add_field_uncallable():
  function test_add_field_flipped_signature (line 67) | def test_add_field_flipped_signature():
  function test_add_field_signature_v2 (line 78) | def test_add_field_signature_v2():
  function test_add_field_keyword_only (line 89) | def test_add_field_keyword_only():
  function test_derived_field (line 102) | def test_derived_field(monkeypatch):
  function test_dimensionless_field (line 134) | def test_dimensionless_field(add_field_kwargs):
  function test_add_field_quick (line 150) | def test_add_field_quick():
  function test_add_field_quick_syntax2 (line 193) | def test_add_field_quick_syntax2():
  function capturable_logger (line 254) | def capturable_logger(caplog):
  function test_add_field_quick_syntax_warnings (line 269) | def test_add_field_quick_syntax_warnings(caplog):

FILE: yt/data_objects/tests/test_bbox.py
  function test_object_bbox (line 9) | def test_object_bbox():
  function test_covering_grid_bbox (line 60) | def test_covering_grid_bbox():
  function test_intersection_bbox (line 90) | def test_intersection_bbox():

FILE: yt/data_objects/tests/test_boolean_regions.py
  function test_boolean_spheres_no_overlap (line 11) | def test_boolean_spheres_no_overlap():
  function test_boolean_spheres_overlap (line 60) | def test_boolean_spheres_overlap():
  function test_boolean_regions_no_overlap (line 103) | def test_boolean_regions_no_overlap():
  function test_boolean_regions_overlap (line 154) | def test_boolean_regions_overlap():
  function test_boolean_cylinders_no_overlap (line 197) | def test_boolean_cylinders_no_overlap():
  function test_boolean_cylinders_overlap (line 248) | def test_boolean_cylinders_overlap():
  function test_boolean_ellipsoids_no_overlap (line 292) | def test_boolean_ellipsoids_no_overlap():
  function test_boolean_ellipsoids_overlap (line 343) | def test_boolean_ellipsoids_overlap():
  function test_boolean_mix_periodicity (line 386) | def test_boolean_mix_periodicity():
  function test_boolean_ray_region_no_overlap (line 441) | def test_boolean_ray_region_no_overlap():
  function test_boolean_ray_region_overlap (line 492) | def test_boolean_ray_region_overlap():
  function test_boolean_rays_no_overlap (line 536) | def test_boolean_rays_no_overlap():
  function test_boolean_rays_overlap (line 586) | def test_boolean_rays_overlap():
  function test_boolean_slices_no_overlap (line 634) | def test_boolean_slices_no_overlap():
  function test_boolean_slices_overlap (line 685) | def test_boolean_slices_overlap():
  function test_boolean_ray_slice_no_overlap (line 728) | def test_boolean_ray_slice_no_overlap():
  function test_boolean_ray_slice_overlap (line 779) | def test_boolean_ray_slice_overlap():

FILE: yt/data_objects/tests/test_center_squeeze.py
  function test_center_squeeze (line 6) | def test_center_squeeze():
  function check_single_ds (line 15) | def check_single_ds(ds):

FILE: yt/data_objects/tests/test_chunking.py
  function _get_dobjs (line 7) | def _get_dobjs(c):
  function test_chunking (line 21) | def test_chunking():
  function test_ds_hold (line 45) | def test_ds_hold():

FILE: yt/data_objects/tests/test_clone.py
  function test_clone_sphere (line 6) | def test_clone_sphere():
  function test_clone_cut_region (line 27) | def test_clone_cut_region():

FILE: yt/data_objects/tests/test_compose.py
  function setup_module (line 9) | def setup_module():
  function _IDFIELD (line 17) | def _IDFIELD(data):
  function test_compose_no_overlap (line 31) | def test_compose_no_overlap():
  function test_compose_overlap (line 84) | def test_compose_overlap():
  function test_compose_max_level_min_level (line 162) | def test_compose_max_level_min_level():

FILE: yt/data_objects/tests/test_connected_sets.py
  function test_connected_sets (line 5) | def test_connected_sets():

FILE: yt/data_objects/tests/test_covering_grid.py
  function setup_module (line 19) | def setup_module():
  function test_covering_grid (line 28) | def test_covering_grid():
  function test_covering_grid_data_source (line 96) | def test_covering_grid_data_source():
  function test_xarray_export (line 147) | def test_xarray_export():
  function test_smoothed_covering_grid (line 184) | def test_smoothed_covering_grid():
  function test_arbitrary_grid (line 210) | def test_arbitrary_grid():
  function test_octree_cg (line 258) | def test_octree_cg():
  function test_smoothed_covering_grid_2d_dataset (line 267) | def test_smoothed_covering_grid_2d_dataset():
  function test_arbitrary_grid_derived_field (line 274) | def test_arbitrary_grid_derived_field():
  function test_arbitrary_field_parameters (line 302) | def test_arbitrary_field_parameters():
  function test_arbitrary_grid_edge (line 321) | def test_arbitrary_grid_edge():

FILE: yt/data_objects/tests/test_cut_region_chaining.py
  function test_chained_cut_region_with_locals (line 7) | def test_chained_cut_region_with_locals():

FILE: yt/data_objects/tests/test_cutting_plane.py
  function setup_module (line 10) | def setup_module():
  function teardown_func (line 16) | def teardown_func(fns):
  function test_cutting_plane (line 24) | def test_cutting_plane():

FILE: yt/data_objects/tests/test_data_collection.py
  function setup_module (line 7) | def setup_module():
  function test_data_collection (line 13) | def test_data_collection():

FILE: yt/data_objects/tests/test_data_containers.py
  function temp_workdir (line 21) | def temp_workdir(tmp_path):
  function test_yt_data_container (line 29) | def test_yt_data_container():
  function test_write_out (line 60) | def test_write_out():
  function test_invalid_write_out (line 81) | def test_invalid_write_out():
  function test_to_dataframe (line 92) | def test_to_dataframe():
  function test_to_astropy_table (line 103) | def test_to_astropy_table():
  function test_std (line 116) | def test_std():
  function test_to_frb (line 121) | def test_to_frb():
  function test_extract_isocontours (line 141) | def test_extract_isocontours():
  function test_derived_field (line 168) | def test_derived_field():

FILE: yt/data_objects/tests/test_dataset_access.py
  function test_box_creation (line 19) | def test_box_creation():
  function test_region_from_d (line 39) | def test_region_from_d():
  function test_accessing_all_data (line 81) | def test_accessing_all_data():
  function test_slice_from_r (line 94) | def test_slice_from_r():
  function test_point_from_r (line 129) | def test_point_from_r():
  function test_ray_from_r (line 141) | def test_ray_from_r():
  function test_ortho_ray_from_r (line 164) | def test_ortho_ray_from_r():
  function test_particle_counts (line 187) | def test_particle_counts():
  function test_checksum (line 200) | def test_checksum():

FILE: yt/data_objects/tests/test_derived_quantities.py
  function setup_module (line 15) | def setup_module():
  function test_extrema (line 21) | def test_extrema():
  function test_extrema_with_nan (line 44) | def test_extrema_with_nan():
  function test_average (line 58) | def test_average():
  function test_standard_deviation (line 76) | def test_standard_deviation():
  function test_max_location (line 100) | def test_max_location():
  function test_min_location (line 115) | def test_min_location():
  function test_sample_at_min_field_values (line 130) | def test_sample_at_min_field_values():
  function test_sample_at_max_field_values (line 151) | def test_sample_at_max_field_values():
  function test_in_memory_sph_derived_quantities (line 172) | def test_in_memory_sph_derived_quantities():
  function test_sph_datasets_derived_quantities (line 216) | def test_sph_datasets_derived_quantities():
  function test_derived_quantities_with_particle_types (line 231) | def test_derived_quantities_with_particle_types():

FILE: yt/data_objects/tests/test_disks.py
  function test_bad_disk_input (line 7) | def test_bad_disk_input():

FILE: yt/data_objects/tests/test_ellipsoid.py
  function setup_module (line 7) | def setup_module():
  function _difference (line 14) | def _difference(x1, x2, dw):
  function test_ellipsoid (line 21) | def test_ellipsoid():

FILE: yt/data_objects/tests/test_exclude_functions.py
  function test_exclude_above (line 8) | def test_exclude_above():
  function test_exclude_below (line 19) | def test_exclude_below():
  function test_exclude_nan (line 30) | def test_exclude_nan():
  function test_equal (line 40) | def test_equal():
  function test_inside_outside (line 53) | def test_inside_outside():

FILE: yt/data_objects/tests/test_extract_regions.py
  function setup_module (line 13) | def setup_module():
  function test_cut_region (line 19) | def test_cut_region():
  function test_cut_region_simple_syntax (line 71) | def test_cut_region_simple_syntax():
  function test_region_and_particles (line 102) | def test_region_and_particles():
  function test_region_chunked_read (line 121) | def test_region_chunked_read():
  function test_chained_cut_region (line 132) | def test_chained_cut_region():

FILE: yt/data_objects/tests/test_firefly.py
  function test_firefly_JSON_string (line 10) | def test_firefly_JSON_string():
  function test_firefly_write_to_disk (line 29) | def test_firefly_write_to_disk(tmp_path):
  function firefly_test_dataset (line 45) | def firefly_test_dataset():
  function test_field_empty_specification (line 78) | def test_field_empty_specification(
  function test_field_unique_string_specification (line 98) | def test_field_unique_string_specification(firefly_test_dataset):
  function test_field_common_string_specification (line 128) | def test_field_common_string_specification(firefly_test_dataset):
  function test_field_tuple_specification (line 176) | def test_field_tuple_specification(
  function test_field_invalid_specification (line 235) | def test_field_invalid_specification(
  function test_field_mixed_specification (line 251) | def test_field_mixed_specification(firefly_test_dataset):

FILE: yt/data_objects/tests/test_fluxes.py
  function setup_module (line 12) | def setup_module():
  function test_flux_calculation (line 18) | def test_flux_calculation():
  function test_sampling (line 35) | def test_sampling():
  class ExporterTests (line 49) | class ExporterTests(TestCase):
    method setUp (line 50) | def setUp(self):
    method tearDown (line 55) | def tearDown(self):
    method test_export_ply (line 59) | def test_export_ply(self):
    method test_export_obj (line 73) | def test_export_obj(self):
  function test_correct_output_unit_fake_ds (line 136) | def test_correct_output_unit_fake_ds():
  function test_radius_surface (line 146) | def test_radius_surface():

FILE: yt/data_objects/tests/test_image_array.py
  function setup_module (line 15) | def setup_module():
  function teardown_module (line 24) | def teardown_module():
  function dummy_image (line 28) | def dummy_image(kstep, nlayers):
  function test_rgba_rescale (line 36) | def test_rgba_rescale():
  class TestImageArray (line 54) | class TestImageArray(unittest.TestCase):
    method setUp (line 58) | def setUp(self):
    method test_image_arry_units (line 63) | def test_image_arry_units(self):
    method test_image_array_hdf5 (line 73) | def test_image_array_hdf5(self):
    method test_image_array_rgb_png (line 104) | def test_image_array_rgb_png(self):
    method test_image_array_rgba_png (line 114) | def test_image_array_rgba_png(self):
    method test_image_array_background (line 123) | def test_image_array_background(self):
    method test_write_image (line 131) | def test_write_image(self):
    method test_clipping_value (line 136) | def test_clipping_value(self):
    method tearDown (line 148) | def tearDown(self):

FILE: yt/data_objects/tests/test_io_geometry.py
  function test_preserve_geometric_properties (line 14) | def test_preserve_geometric_properties():
  function test_default_to_cartesian (line 32) | def test_default_to_cartesian():

FILE: yt/data_objects/tests/test_numpy_ops.py
  function setup_module (line 7) | def setup_module():
  function test_mean_sum_integrate (line 13) | def test_mean_sum_integrate():
  function test_min_max (line 93) | def test_min_max():
  function test_argmin (line 153) | def test_argmin():
  function test_argmax (line 186) | def test_argmax():

FILE: yt/data_objects/tests/test_octree.py
  function test_building_tree (line 9) | def test_building_tree():
  function test_sph_interpolation_scatter (line 18) | def test_sph_interpolation_scatter():
  function test_sph_interpolation_gather (line 55) | def test_sph_interpolation_gather():
  function test_octree_properties (line 94) | def test_octree_properties():

FILE: yt/data_objects/tests/test_ortho_rays.py
  function test_ortho_ray (line 7) | def test_ortho_ray():

FILE: yt/data_objects/tests/test_particle_filter.py
  function test_add_particle_filter (line 15) | def test_add_particle_filter():
  function test_add_particle_filter_overriding (line 55) | def test_add_particle_filter_overriding():
  function test_particle_filter_decorator (line 100) | def test_particle_filter_decorator():
  function test_particle_filter_exceptions (line 125) | def test_particle_filter_exceptions():
  function test_particle_filter_dependency (line 147) | def test_particle_filter_dependency():
  function test_covering_grid_particle_filter (line 171) | def test_covering_grid_particle_filter():
  function test_sph_particle_filter_plotting (line 193) | def test_sph_particle_filter_plotting():

FILE: yt/data_objects/tests/test_particle_trajectories.py
  function setup_module (line 9) | def setup_module():
  function test_orbit_traj (line 28) | def test_orbit_traj():
  function test_etc_traj (line 44) | def test_etc_traj():

FILE: yt/data_objects/tests/test_particle_trajectories_pytest.py
  function particle_trajectories_test_dataset (line 23) | def particle_trajectories_test_dataset():
  function test_uniqueness (line 53) | def test_uniqueness():
  function test_ptype (line 83) | def test_ptype():
  function test_default_field_tuple (line 123) | def test_default_field_tuple(particle_trajectories_test_dataset, ptype):
  function test_time_and_index (line 139) | def test_time_and_index(particle_trajectories_test_dataset, ptype):

FILE: yt/data_objects/tests/test_pickling.py
  function test_grid_pickles (line 14) | def test_grid_pickles():
  function test_particle_pickles (line 23) | def test_particle_pickles():

FILE: yt/data_objects/tests/test_points.py
  function setup_module (line 8) | def setup_module():
  function test_point_creation (line 14) | def test_point_creation():
  function test_domain_point (line 26) | def test_domain_point():
  function test_fast_find_field_values_at_points (line 61) | def test_fast_find_field_values_at_points():

FILE: yt/data_objects/tests/test_print_stats.py
  function test_no_print_stats (line 9) | def test_no_print_stats():
  function test_print_stats (line 15) | def test_print_stats():

FILE: yt/data_objects/tests/test_profiles.py
  function test_profiles (line 25) | def test_profiles():
  function test_particle_profiles (line 253) | def test_particle_profiles():
  function test_mixed_particle_mesh_profiles (line 326) | def test_mixed_particle_mesh_profiles():
  function test_particle_profile_negative_field (line 401) | def test_particle_profile_negative_field():
  function test_profile_zero_weight (line 481) | def test_profile_zero_weight():
  function test_profile_sph_data (line 528) | def test_profile_sph_data():
  function test_profile_override_limits (line 545) | def test_profile_override_limits():
  class TestBadProfiles (line 585) | class TestBadProfiles(unittest.TestCase):
    method setUp (line 589) | def setUp(self):
    method tearDown (line 594) | def tearDown(self):
    method test_unequal_data_shape_profile (line 600) | def test_unequal_data_shape_profile(self):
    method test_unequal_bin_field_profile (line 625) | def test_unequal_bin_field_profile(self):
    method test_set_linear_scaling_for_none_extrema (line 649) | def test_set_linear_scaling_for_none_extrema(self):
  function test_index_field_units (line 665) | def test_index_field_units():
  function test_export_astropy (line 683) | def test_export_astropy():
  function test_export_pandas (line 725) | def test_export_pandas():
  function test_preserve_source_parameters_restores_field_parameters_on_exception (line 754) | def test_preserve_source_parameters_restores_field_parameters_on_excepti...

FILE: yt/data_objects/tests/test_projection.py
  function setup_module (line 14) | def setup_module():
  function teardown_func (line 20) | def teardown_func(fns):
  function test_projection (line 29) | def test_projection(pf):
  function test_max_level (line 164) | def test_max_level():
  function test_min_level (line 173) | def test_min_level():

FILE: yt/data_objects/tests/test_rays.py
  function test_ray (line 17) | def test_ray():
  function test_ray_particle (line 72) | def test_ray_particle():
  function test_ray_particle2 (line 90) | def test_ray_particle2():

FILE: yt/data_objects/tests/test_refinement.py
  function setup_fake_refby (line 7) | def setup_fake_refby():
  function test_refine_by (line 44) | def test_refine_by():

FILE: yt/data_objects/tests/test_regions.py
  function test_box_creation (line 7) | def test_box_creation():
  function test_max_level_min_level_semantics (line 20) | def test_max_level_min_level_semantics():
  function test_ellipsis_selection (line 34) | def test_ellipsis_selection():

FILE: yt/data_objects/tests/test_registration.py
  function test_reregistration_warning (line 7) | def test_reregistration_warning():

FILE: yt/data_objects/tests/test_slice.py
  function setup_module (line 12) | def setup_module():
  function teardown_func (line 18) | def teardown_func(fns):
  function test_slice (line 27) | def test_slice(pf):
  function test_slice_over_edges (line 78) | def test_slice_over_edges():
  function test_slice_over_outer_boundary (line 88) | def test_slice_over_outer_boundary():

FILE: yt/data_objects/tests/test_sph_data_objects.py
  function test_point (line 9) | def test_point():
  function test_slice (line 44) | def test_slice():
  function test_slice_to_frb (line 67) | def test_slice_to_frb():
  function test_region (line 77) | def test_region():
  function test_periodic_region (line 97) | def test_periodic_region():
  function test_sphere (line 125) | def test_sphere():
  function test_disk (line 156) | def test_disk():
  function test_ray (line 177) | def test_ray():
  function test_cutting (line 197) | def test_cutting():
  function test_chained_selection (line 206) | def test_chained_selection():
  function test_boolean_selection (line 215) | def test_boolean_selection():
  function test_arbitrary_grid (line 265) | def test_arbitrary_grid():
  function test_compare_arbitrary_grid_slice (line 279) | def test_compare_arbitrary_grid_slice():
  function test_gather_slice (line 298) | def test_gather_slice():
  function test_gather_grid (line 319) | def test_gather_grid():
  function test_covering_grid_scatter (line 334) | def test_covering_grid_scatter():
  function test_covering_grid_gather (line 348) | def test_covering_grid_gather():
  function test_covering_grid_derived_fields (line 365) | def test_covering_grid_derived_fields():

FILE: yt/data_objects/tests/test_spheres.py
  function setup_module (line 9) | def setup_module():
  function test_domain_sphere (line 25) | def test_domain_sphere():
  function test_sphere_center (line 92) | def test_sphere_center():
  function test_center_error (line 110) | def test_center_error():
  function test_minimal_sphere (line 121) | def test_minimal_sphere():
  function test_minimal_sphere_bad_inputs (line 140) | def test_minimal_sphere_bad_inputs():

FILE: yt/data_objects/tests/test_time_series.py
  function test_pattern_expansion (line 12) | def test_pattern_expansion():
  function test_no_match_pattern (line 29) | def test_no_match_pattern():
  function FakeDataset (line 37) | def FakeDataset():
  function fake_datasets (line 73) | def fake_datasets():
  function test_init_fake_dataseries (line 85) | def test_init_fake_dataseries(fake_datasets):
  function test_init_fake_dataseries2 (line 114) | def test_init_fake_dataseries2(FakeDataset, fake_datasets):
  function test_get_by_key (line 125) | def test_get_by_key(FakeDataset, fake_datasets):

FILE: yt/data_objects/tests/test_units_override.py
  function test_schema_validation (line 12) | def test_schema_validation():
  function test_invalid_schema_detection (line 30) | def test_invalid_schema_detection():
  function test_typing_error_detection (line 57) | def test_typing_error_detection():
  function test_dimensionality_error_detection (line 68) | def test_dimensionality_error_detection():

FILE: yt/data_objects/time_series.py
  class AnalysisTaskProxy (line 36) | class AnalysisTaskProxy:
    method __init__ (line 37) | def __init__(self, time_series):
    method __getitem__ (line 40) | def __getitem__(self, key):
    method keys (line 50) | def keys(self):
    method __contains__ (line 53) | def __contains__(self, key):
  function get_ds_prop (line 57) | def get_ds_prop(propname):
  class TimeSeriesParametersContainer (line 82) | class TimeSeriesParametersContainer:
    method __init__ (line 83) | def __init__(self, data_object):
    method __getattr__ (line 86) | def __getattr__(self, attr):
  class DatasetSeries (line 92) | class DatasetSeries:
    method __init_subclass__ (line 153) | def __init_subclass__(cls, *args, **kwargs):
    method __new__ (line 160) | def __new__(cls, outputs, *args, **kwargs):
    method __init__ (line 170) | def __init__(
    method _get_filenames_from_glob_pattern (line 199) | def _get_filenames_from_glob_pattern(outputs):
    method __getitem__ (line 214) | def __getitem__(self, key):
    method __len__ (line 228) | def __len__(self):
    method outputs (line 232) | def outputs(self):
    method piter (line 235) | def piter(self, storage=None, dynamic=False):
    method eval (line 341) | def eval(self, tasks, obj=None):
    method from_output_log (line 364) | def from_output_log(cls, output_log, line_prefix="DATASET WRITTEN", pa...
    method _load (line 375) | def _load(self, output_fn, *, hint: str | None = None, **kwargs):
    method particle_trajectories (line 386) | def particle_trajectories(
    method _get_by_attribute (line 440) | def _get_by_attribute(
    method get_by_time (line 545) | def get_by_time(
    method get_by_redshift (line 577) | def get_by_redshift(
  class TimeSeriesQuantitiesContainer (line 608) | class TimeSeriesQuantitiesContainer:
    method __init__ (line 609) | def __init__(self, data_object, quantities):
    method __getitem__ (line 613) | def __getitem__(self, key):
  class DatasetSeriesObject (line 629) | class DatasetSeriesObject:
    method __init__ (line 630) | def __init__(self, time_series, data_object_name, *args, **kwargs):
    method eval (line 641) | def eval(self, tasks):
    method get (line 644) | def get(self, ds):
  class SimulationTimeSeries (line 651) | class SimulationTimeSeries(DatasetSeries, ABC):
    method __init__ (line 652) | def __init__(self, parameter_filename, find_outputs=False):
    method _set_parameter_defaults (line 679) | def _set_parameter_defaults(self):  # noqa: B027
    method _parse_parameter_file (line 683) | def _parse_parameter_file(self):
    method _set_units (line 687) | def _set_units(self):
    method _calculate_simulation_bounds (line 691) | def _calculate_simulation_bounds(self):
    method _get_all_outputs (line 695) | def _get_all_outputs(self, *, find_outputs=False):
    method __repr__ (line 698) | def __repr__(self):
    method arr (line 704) | def arr(self):
    method quan (line 713) | def quan(self):
    method print_key_parameters (line 720) | def print_key_parameters(self):
    method _print_attr (line 744) | def _print_attr(self, a):
    method _get_outputs_by_key (line 754) | def _get_outputs_by_key(self, key, values, tolerance=None, outputs=None):

FILE: yt/data_objects/unions.py
  class Union (line 6) | class Union(ABC):
    method _union_type (line 9) | def _union_type(self) -> str: ...
    method __init__ (line 11) | def __init__(self, name, sub_types):
    method __iter__ (line 15) | def __iter__(self):
    method __repr__ (line 18) | def __repr__(self):
  class MeshUnion (line 22) | class MeshUnion(Union):
  class ParticleUnion (line 26) | class ParticleUnion(Union):

FILE: yt/extensions/__init__.py
  function setup (line 23) | def setup():

FILE: yt/exthook.py
  class ExtensionImporter (line 27) | class ExtensionImporter:
    method __init__ (line 33) | def __init__(self, module_choices, wrapper_module):
    method __eq__ (line 39) | def __eq__(self, other):
    method __ne__ (line 47) | def __ne__(self, other):
    method install (line 50) | def install(self):
    method find_module (line 53) | def find_module(self, fullname, path=None):
    method load_module (line 57) | def load_module(self, fullname):
    method is_important_traceback (line 91) | def is_important_traceback(self, important_module, tb):
    method is_important_frame (line 103) | def is_important_frame(self, important_module, tb):

FILE: yt/fields/angular_momentum.py
  function setup_angular_momentum (line 14) | def setup_angular_momentum(registry, ftype="gas", slice_info=None):

FILE: yt/fields/astro_fields.py
  function setup_astro_fields (line 9) | def setup_astro_fields(registry, ftype="gas", slice_info=None):

FILE: yt/fields/astro_simulations.py
  class AstroSimulation (line 13) | class AstroSimulation(DomainContext):

FILE: yt/fields/cosmology_fields.py
  function setup_cosmology_fields (line 7) | def setup_cosmology_fields(registry, ftype="gas", slice_info=None):

FILE: yt/fields/derived_field.py
  class _FieldFuncSignature (line 39) | class _FieldFuncSignature(enum.Enum):
  function TranslationFunc (line 44) | def TranslationFunc(field_name):
  function NullFunc (line 53) | def NullFunc(field, data):
  function DeprecatedFieldFunc (line 57) | def DeprecatedFieldFunc(ret_field, func, since, removal):
  class DerivedFieldBase (line 76) | class DerivedFieldBase(abc.ABC):
    method __call__ (line 78) | def __call__(self, field, data):
    method __repr__ (line 82) | def __repr__(self) -> str:
    method __mul__ (line 86) | def __mul__(self, other) -> "DerivedFieldCombination":
    method __rmul__ (line 89) | def __rmul__(self, other) -> "DerivedFieldCombination":
    method __truediv__ (line 93) | def __truediv__(self, other) -> "DerivedFieldCombination":
    method __rtruediv__ (line 96) | def __rtruediv__(self, other) -> "DerivedFieldCombination":
    method __add__ (line 100) | def __add__(self, other) -> "DerivedFieldCombination":
    method __radd__ (line 103) | def __radd__(self, other) -> "DerivedFieldCombination":
    method __sub__ (line 107) | def __sub__(self, other) -> "DerivedFieldCombination":
    method __rsub__ (line 110) | def __rsub__(self, other) -> "DerivedFieldCombination":
    method __neg__ (line 114) | def __neg__(self) -> "DerivedFieldCombination":
    method __leq__ (line 118) | def __leq__(self, other) -> "DerivedFieldCombination":
    method __lt__ (line 121) | def __lt__(self, other) -> "DerivedFieldCombination":
    method __geq__ (line 124) | def __geq__(self, other) -> "DerivedFieldCombination":
    method __gt__ (line 127) | def __gt__(self, other) -> "DerivedFieldCombination":
    method __eq__ (line 132) | def __eq__(self, other) -> "DerivedFieldCombination":  # type: ignore[...
    method __ne__ (line 135) | def __ne__(self, other) -> "DerivedFieldCombination":  # type: ignore[...
    method __hash__ (line 139) | def __hash__(self) -> int:
  class DerivedFieldCombination (line 143) | class DerivedFieldCombination(DerivedFieldBase):
    method __init__ (line 148) | def __init__(self, terms: list, op: Callable):
    method __hash__ (line 167) | def __hash__(self) -> int:
    method __call__ (line 170) | def __call__(self, field, data):
    method __repr__ (line 188) | def __repr__(self):
    method getDependentFields (line 191) | def getDependentFields(self):
    method name (line 203) | def name(self):
    method __bool__ (line 206) | def __bool__(self):
  class DerivedField (line 220) | class DerivedField(DerivedFieldBase):
    method __init__ (line 272) | def __init__(
    method __hash__ (line 344) | def __hash__(self) -> int:
    method _copy_def (line 364) | def _copy_def(self):
    method is_sph_field (line 378) | def is_sph_field(self):
    method local_sampling (line 391) | def local_sampling(self):
    method get_units (line 394) | def get_units(self):
    method get_projected_units (line 401) | def get_projected_units(self):
    method check_available (line 408) | def check_available(self, data):
    method get_dependencies (line 418) | def get_dependencies(self, *args, **kwargs):
    method _get_needed_parameters (line 426) | def _get_needed_parameters(self, fd):
    method unit_registry (line 442) | def unit_registry(self, data):
    method __call__ (line 454) | def __call__(self, data):
    method _func_signature_type (line 471) | def _func_signature_type(self) -> _FieldFuncSignature:
    method _eval (line 478) | def _eval(self, data):
    method get_source (line 487) | def get_source(self):
    method get_label (line 493) | def get_label(self, projected=False):
    method alias_field (line 520) | def alias_field(self) -> bool:
    method is_alias (line 529) | def is_alias(self) -> bool:
    method is_alias_to (line 532) | def is_alias_to(self, other: "DerivedField") -> bool:
    method alias_name (line 536) | def alias_name(self) -> FieldKey | None:
    method __repr__ (line 541) | def __repr__(self):
    method _is_ion (line 556) | def _is_ion(self):
    method _ion_to_label (line 563) | def _ion_to_label(self):
    method get_latex_display_name (line 663) | def get_latex_display_name(self):
    method __copy__ (line 677) | def __copy__(self):
  class FieldValidator (line 698) | class FieldValidator:
    method __init_subclass__ (line 703) | def __init_subclass__(cls, **kwargs):
  class ValidateParameter (line 711) | class ValidateParameter(FieldValidator):
    method __init__ (line 725) | def __init__(
    method __call__ (line 734) | def __call__(self, data):
  class ValidateDataField (line 744) | class ValidateDataField(FieldValidator):
    method __init__ (line 755) | def __init__(self, field):
    method __call__ (line 759) | def __call__(self, data):
  class ValidateProperty (line 771) | class ValidateProperty(FieldValidator):
    method __init__ (line 781) | def __init__(self, prop: str | Iterable[str]):
    method __call__ (line 785) | def __call__(self, data):
  class ValidateSpatial (line 792) | class ValidateSpatial(FieldValidator):
    method __init__ (line 807) | def __init__(self, ghost_zones: int | None = 0, fields=None):
    method __call__ (line 812) | def __call__(self, data):
  class ValidateGridType (line 822) | class ValidateGridType(FieldValidator):
    method __init__ (line 828) | def __init__(self):
    method __call__ (line 831) | def __call__(self, data):

FILE: yt/fields/domain_context.py
  class DomainContext (line 8) | class DomainContext(abc.ABC):
    class __metaclass__ (line 9) | class __metaclass__(type):
      method __init__ (line 10) | def __init__(cls, name, b, d):
    method __init__ (line 17) | def __init__(self, ds):

FILE: yt/fields/field_detector.py
  class FieldDetector (line 27) | class FieldDetector(defaultdict):
    method __init__ (line 34) | def __init__(self, nd=16, ds=None, flat=False, field_parameters=None):
    method _reshape_vals (line 101) | def _reshape_vals(self, arr):
    method __missing__ (line 108) | def __missing__(self, item: tuple[str, str] | str):
    method _debug (line 190) | def _debug(self):
    method deposit (line 194) | def deposit(self, *args, **kwargs):
    method mesh_sampling_particle_field (line 204) | def mesh_sampling_particle_field(self, *args, **kwargs):
    method smooth (line 210) | def smooth(self, *args, **kwargs):
    method particle_operation (line 218) | def particle_operation(self, *args, **kwargs):
    method _read_data (line 221) | def _read_data(self, field_name):
    method get_field_parameter (line 233) | def get_field_parameter(self, param, default=0.0):
    method apply_units (line 271) | def apply_units(self, arr, units):
    method has_field_parameter (line 274) | def has_field_parameter(self, param):
    method fcoords (line 278) | def fcoords(self):
    method fcoords_vertex (line 289) | def fcoords_vertex(self):
    method icoords (line 298) | def icoords(self):
    method ires (line 310) | def ires(self):
    method fwidth (line 318) | def fwidth(self):

FILE: yt/fields/field_exceptions.py
  class ValidationException (line 1) | class ValidationException(Exception):
  class NeedsGridType (line 5) | class NeedsGridType(ValidationException):
    method __init__ (line 6) | def __init__(self, ghost_zones=0, fields=None):
    method __str__ (line 10) | def __str__(self):
  class NeedsOriginalGrid (line 15) | class NeedsOriginalGrid(NeedsGridType):
    method __init__ (line 16) | def __init__(self):
  class NeedsDataField (line 20) | class NeedsDataField(ValidationException):
    method __init__ (line 21) | def __init__(self, missing_fields):
    method __str__ (line 24) | def __str__(self):
  class NeedsProperty (line 28) | class NeedsProperty(ValidationException):
    method __init__ (line 29) | def __init__(self, missing_properties):
    method __str__ (line 32) | def __str__(self):
  class NeedsParameter (line 36) | class NeedsParameter(ValidationException):
    method __init__ (line 37) | def __init__(self, missing_parameters):
    method __str__ (line 40) | def __str__(self):
  class NeedsConfiguration (line 44) | class NeedsConfiguration(ValidationException):
    method __init__ (line 45) | def __init__(self, parameter, value):
    method __str__ (line 49) | def __str__(self):
  class FieldUnitsError (line 53) | class FieldUnitsError(Exception):

FILE: yt/fields/field_functions.py
  function get_radius (line 10) | def get_radius(data, field_prefix, ftype):
  function get_periodic_rvec (line 47) | def get_periodic_rvec(data):
  function validate_field_function (line 79) | def validate_field_function(function: Callable) -> None:

FILE: yt/fields/field_info_container.py
  class FieldInfoContainer (line 38) | class FieldInfoContainer(UserDict):
    method __init__ (line 52) | def __init__(self, ds, field_list: list[FieldKey], slice_info=None):
    method curvilinear (line 64) | def curvilinear(self) -> bool:
    method setup_fluid_fields (line 78) | def setup_fluid_fields(self):
    method setup_fluid_index_fields (line 81) | def setup_fluid_index_fields(self):
    method setup_particle_fields (line 94) | def setup_particle_fields(self, ptype, ftype="gas", num_neighbors=64):
    method setup_extra_union_fields (line 166) | def setup_extra_union_fields(self, ptype="all"):
    method setup_smoothed_fields (line 175) | def setup_smoothed_fields(self, ptype, num_neighbors=64, ftype="gas"):
    method get_aliases_gallery (line 218) | def get_aliases_gallery(self) -> list[FieldName]:
    method setup_fluid_aliases (line 247) | def setup_fluid_aliases(self, ftype: FieldType = "gas") -> None:
    method _sanitize_sampling_type (line 303) | def _sanitize_sampling_type(sampling_type: str) -> str:
    method add_field (line 331) | def add_field(
    method load_all_plugins (line 394) | def load_all_plugins(self, ftype: str | None = "gas") -> None:
    method load_plugin (line 404) | def load_plugin(
    method find_dependencies (line 416) | def find_dependencies(self, loaded):
    method add_output_field (line 424) | def add_output_field(self, name, sampling_type, **kwargs):
    method alias (line 434) | def alias(
    method add_deprecated_field (line 501) | def add_deprecated_field(
    method has_key (line 555) | def has_key(self, key):
    method __missing__ (line 563) | def __missing__(self, key):
    method create_with_fallback (line 569) | def create_with_fallback(cls, fallback, name=""):
    method __contains__ (line 575) | def __contains__(self, key):
    method __iter__ (line 582) | def __iter__(self):
    method keys (line 587) | def keys(self):
    method check_derived_fields (line 593) | def check_derived_fields(self, fields_to_check=None):
    method _set_linear_fields (line 688) | def _set_linear_fields(self):

FILE: yt/fields/field_plugin_registry.py
  function register_field_plugin (line 8) | def register_field_plugin(func: Callable) -> Callable:

FILE: yt/fields/field_type_container.py
  function _fill_values (line 14) | def _fill_values(values):
  class FieldTypeContainer (line 28) | class FieldTypeContainer:
    method __init__ (line 29) | def __init__(self, ds):
    method __getattr__ (line 32) | def __getattr__(self, attr):
    method field_types (line 40) | def field_types(self):
    method __dir__ (line 43) | def __dir__(self):
    method __iter__ (line 46) | def __iter__(self):
    method __contains__ (line 54) | def __contains__(self, obj):
    method _ipython_display_ (line 65) | def _ipython_display_(self):
  class FieldNameContainer (line 83) | class FieldNameContainer:
    method __init__ (line 84) | def __init__(self, ds, field_type):
    method __getattr__ (line 88) | def __getattr__(self, attr):
    method __setattr__ (line 95) | def __setattr__(self, attr, value):
    method __dir__ (line 101) | def __dir__(self):
    method __iter__ (line 104) | def __iter__(self):
    method __contains__ (line 109) | def __contains__(self, obj):
    method _ipython_display_ (line 127) | def _ipython_display_(self):

FILE: yt/fields/fluid_fields.py
  function setup_fluid_fields (line 18) | def setup_fluid_fields(registry, ftype="gas", slice_info=None):
  function setup_gradient_fields (line 244) | def setup_gradient_fields(registry, grad_field, field_units, slice_info=...

FILE: yt/fields/fluid_vector_fields.py
  function setup_fluid_vector_fields (line 15) | def setup_fluid_vector_fields(

FILE: yt/fields/geometric_fields.py
  function setup_geometric_fields (line 19) | def setup_geometric_fields(registry, ftype="gas", slice_info=None):

FILE: yt/fields/interpolated_fields.py
  function add_interpolated_field (line 15) | def add_interpolated_field(

FILE: yt/fields/local_fields.py
  class LocalFieldInfoContainer (line 17) | class LocalFieldInfoContainer(FieldInfoContainer):
    method add_field (line 18) | def add_field(
  class derived_field (line 55) | class derived_field:
    method __init__ (line 58) | def __init__(self, **kwargs) -> None:
    method __call__ (line 61) | def __call__(self, f: Callable) -> Callable:
  function setup_local_fields (line 67) | def setup_local_fields(registry, ftype="gas", slice_info=None):

FILE: yt/fields/magnetic_field.py
  function get_magnetic_normalization (line 21) | def get_magnetic_normalization(key: str) -> float:
  function setup_magnetic_field_fields (line 31) | def setup_magnetic_field_fields(
  function setup_magnetic_field_aliases (line 263) | def setup_magnetic_field_aliases(registry, ds_ftype, ds_fields, ftype="g...

FILE: yt/fields/my_plugin_fields.py
  function setup_my_plugins_fields (line 9) | def setup_my_plugins_fields(registry, ftype="gas", slice_info=None):

FILE: yt/fields/particle_fields.py
  function _field_concat (line 71) | def _field_concat(fname):
  function _field_concat_slice (line 84) | def _field_concat_slice(fname, axi):
  function particle_deposition_functions (line 97) | def particle_deposition_functions(ptype, coord_name, mass_name, registry):
  function particle_scalar_functions (line 245) | def particle_scalar_functions(ptype, coord_name, vel_name, registry):
  function particle_vector_functions (line 277) | def particle_vector_functions(ptype, coord_names, vel_names, registry):
  function get_angular_momentum_components (line 304) | def get_angular_momentum_components(ptype, data, spos, svel):
  function standard_particle_fields (line 311) | def standard_particle_fields(
  function add_particle_average (line 741) | def add_particle_average(registry, ptype, field_name, weight=None, densi...
  function add_nearest_neighbor_field (line 770) | def add_nearest_neighbor_field(ptype, coord_name, registry, nneighbors=64):
  function add_nearest_neighbor_value_field (line 793) | def add_nearest_neighbor_value_field(ptype, coord_name, sampled_field, r...
  function add_union_field (line 823) | def add_union_field(registry, ptype, field_name, units):

FILE: yt/fields/species_fields.py
  function _create_fraction_func (line 21) | def _create_fraction_func(ftype, species):
  function _mass_from_cell_volume_and_density (line 28) | def _mass_from_cell_volume_and_density(ftype, species):
  function _mass_from_particle_mass_and_fraction (line 35) | def _mass_from_particle_mass_and_fraction(ftype, species):
  function _create_number_density_func (line 42) | def _create_number_density_func(ftype, species):
  function _create_density_func (line 53) | def _create_density_func(ftype, species):
  function add_species_field_by_density (line 60) | def add_species_field_by_density(registry, ftype, species):
  function add_species_field_by_fraction (line 100) | def add_species_field_by_fraction(registry, ftype, species):
  function add_species_aliases (line 140) | def add_species_aliases(registry, ftype, alias_species, species):
  function add_deprecated_species_aliases (line 158) | def add_deprecated_species_aliases(registry, ftype, alias_species, speci...
  function add_deprecated_species_alias (line 167) | def add_deprecated_species_alias(registry, ftype, alias_species, species...
  function add_nuclei_density_fields (line 189) | def add_nuclei_density_fields(registry, ftype):
  function _default_nuclei_density (line 252) | def _default_nuclei_density(field, data):
  function _nuclei_density (line 267) | def _nuclei_density(field, data):
  function _get_all_elements (line 304) | def _get_all_elements(species_list):
  function _get_element_multiple (line 313) | def _get_element_multiple(compound, element):
  function setup_species_fields (line 324) | def setup_species_fields(registry, ftype="gas", slice_info=None):

FILE: yt/fields/tensor_fields.py
  function metric (line 5) | def metric(mu: int, nu: int):
  function setup_stress_energy_ideal (line 15) | def setup_stress_energy_ideal(registry, ftype="gas"):

FILE: yt/fields/tests/test_ambiguous_fields.py
  function test_ambiguous_fails (line 6) | def test_ambiguous_fails():
  function test_nameonly_field_with_all_aliases_candidates (line 26) | def test_nameonly_field_with_all_aliases_candidates():

FILE: yt/fields/tests/test_angular_momentum.py
  function test_AM_value (line 6) | def test_AM_value():

FILE: yt/fields/tests/test_field_access.py
  function test_field_access (line 9) | def test_field_access():

FILE: yt/fields/tests/test_field_access_pytest.py
  function test_unexisting_field_access (line 10) | def test_unexisting_field_access():

FILE: yt/fields/tests/test_field_name_container.py
  function do_field_type (line 5) | def do_field_type(ft):
  function test_field_name_container (line 24) | def test_field_name_container():
  function test_vertex_fields_only_in_unstructured_ds (line 37) | def test_vertex_fields_only_in_unstructured_ds():

FILE: yt/fields/tests/test_fields.py
  function get_params (line 32) | def get_params(ds):
  function _strip_ftype (line 57) | def _strip_ftype(field):
  class FieldAccessTestCase (line 66) | class FieldAccessTestCase:
    method description (line 72) | def description(self) -> str:
  function get_base_ds (line 76) | def get_base_ds(nprocs):
  function test_all_fields (line 125) | def test_all_fields():
  function test_add_deposited_particle_field (line 197) | def test_add_deposited_particle_field():
  function test_add_gradient_fields (line 223) | def test_add_gradient_fields():
  function test_add_gradient_fields_by_fname (line 247) | def test_add_gradient_fields_by_fname():
  function test_add_gradient_multiple_fields (line 259) | def test_add_gradient_multiple_fields():
  function test_add_gradient_fields_curvilinear (line 279) | def test_add_gradient_fields_curvilinear():
  function get_data (line 303) | def get_data(ds, field_name):
  function test_add_field_unit_semantics (line 310) | def test_add_field_unit_semantics():
  function test_add_field_from_lambda (line 384) | def test_add_field_from_lambda():
  function test_array_like_field (line 410) | def test_array_like_field():
  function test_array_like_field_output_units (line 423) | def test_array_like_field_output_units():
  function test_add_field_string (line 436) | def test_add_field_string():
  function test_add_field_string_aliasing (line 455) | def test_add_field_string_aliasing():
  function test_morton_index (line 487) | def test_morton_index():
  function test_deposit_amr (line 499) | def test_deposit_amr():
  function test_ion_field_labels (line 507) | def test_ion_field_labels():
  function test_default_fluid_type_None (line 552) | def test_default_fluid_type_None():

FILE: yt/fields/tests/test_fields_plugins.py
  class TestPluginFile (line 36) | class TestPluginFile(unittest.TestCase):
    method setUpClass (line 38) | def setUpClass(cls):
    method tearDownClass (line 50) | def tearDownClass(cls):
    method testCustomField (line 57) | def testCustomField(self):

FILE: yt/fields/tests/test_fields_pytest.py
  function test_validate_field_function (line 19) | def test_validate_field_function(function):
  function test_validate_field_function_default (line 30) | def test_validate_field_function_default(function):
  function test_invalidate_field_function (line 55) | def test_invalidate_field_function(function):

FILE: yt/fields/tests/test_magnetic_fields.py
  function setup_module (line 8) | def setup_module():
  function test_magnetic_fields (line 14) | def test_magnetic_fields():

FILE: yt/fields/tests/test_particle_fields.py
  function test_relative_particle_fields (line 11) | def test_relative_particle_fields():
  function test_los_particle_fields (line 28) | def test_los_particle_fields():

FILE: yt/fields/tests/test_species_fields.py
  function test_default_species_fields (line 8) | def test_default_species_fields():

FILE: yt/fields/tests/test_sph_fields.py
  function test_sph_field_semantics (line 45) | def test_sph_field_semantics():
  function sph_fields_validate (line 50) | def sph_fields_validate(ds_fn):

FILE: yt/fields/tests/test_vector_fields.py
  function random_unit_vector (line 14) | def random_unit_vector(prng):
  function random_velocity_vector (line 21) | def random_velocity_vector(prng):
  function compare_vector_conversions (line 25) | def compare_vector_conversions(data_source):
  function test_vector_component_conversions_fake (line 146) | def test_vector_component_conversions_fake():
  function test_vector_component_conversions_real (line 157) | def test_vector_component_conversions_real():

FILE: yt/fields/tests/test_xray_fields.py
  function setup_module (line 11) | def setup_module():
  function check_xray_fields (line 17) | def check_xray_fields(ds_fn, fields):
  function test_sloshing_apec (line 33) | def test_sloshing_apec():
  function test_d9p_cloudy (line 42) | def test_d9p_cloudy():
  function test_d9p_cloudy_local (line 60) | def test_d9p_cloudy_local():

FILE: yt/fields/vector_operations.py
  function get_bulk (line 32) | def get_bulk(data, basename, unit):
  function create_magnitude_field (line 40) | def create_magnitude_field(
  function create_relative_field (line 78) | def create_relative_field(
  function create_los_field (line 104) | def create_los_field(
  function create_squared_field (line 156) | def create_squared_field(
  function create_vector_fields (line 182) | def create_vector_fields(
  function create_averaged_field (line 664) | def create_averaged_field(

FILE: yt/fields/xray_emission_fields.py
  function _get_data_file (line 22) | def _get_data_file(table_type, data_dir=None):
  class EnergyBoundsException (line 35) | class EnergyBoundsException(YTException):
    method __init__ (line 36) | def __init__(self, lower, upper):
    method __str__ (line 40) | def __str__(self):
  class ObsoleteDataException (line 44) | class ObsoleteDataException(YTException):
    method __init__ (line 45) | def __init__(self, table_type):
    method __str__ (line 50) | def __str__(self):
  class XrayEmissivityIntegrator (line 54) | class XrayEmissivityIntegrator:
    method __init__ (line 80) | def __init__(self, table_type, redshift=0.0, data_dir=None, use_metals...
    method get_interpolator (line 107) | def get_interpolator(self, data_type, e_min, e_max, energy=True):
  function add_xray_emissivity_field (line 145) | def add_xray_emissivity_field(

FILE: yt/frontends/__init__.py
  function __getattr__ (line 52) | def __getattr__(value):

FILE: yt/frontends/_skeleton/data_structures.py
  class SkeletonGrid (line 14) | class SkeletonGrid(AMRGridPatch):
    method __init__ (line 17) | def __init__(self, id, index, level):
  class SkeletonHierarchy (line 24) | class SkeletonHierarchy(GridIndex):
    method __init__ (line 27) | def __init__(self, ds, dataset_type="skeleton"):
    method _detect_output_fields (line 37) | def _detect_output_fields(self):
    method _count_grids (line 46) | def _count_grids(self):
    method _parse_index (line 50) | def _parse_index(self):
    method _populate_grid_objects (line 61) | def _populate_grid_objects(self):
  class SkeletonDataset (line 75) | class SkeletonDataset(Dataset):
    method __init__ (line 82) | def __init__(
    method _set_code_unit_attributes (line 103) | def _set_code_unit_attributes(self):
    method _parse_parameter_file (line 127) | def _parse_parameter_file(self):
    method _is_valid (line 166) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:

FILE: yt/frontends/_skeleton/fields.py
  class SkeletonFieldInfo (line 8) | class SkeletonFieldInfo(FieldInfoContainer):
    method __init__ (line 19) | def __init__(self, ds, field_list):
    method setup_fluid_fields (line 23) | def setup_fluid_fields(self):
    method setup_particle_fields (line 29) | def setup_particle_fields(self, ptype):

FILE: yt/frontends/_skeleton/io.py
  class SkeletonIOHandler (line 4) | class SkeletonIOHandler(BaseIOHandler):
    method _read_particle_coords (line 8) | def _read_particle_coords(self, chunks, ptf):
    method _read_particle_fields (line 14) | def _read_particle_fields(self, chunks, ptf, selector):
    method _read_fluid_selection (line 22) | def _read_fluid_selection(self, chunks, selector, fields, size):
    method _read_chunk_data (line 42) | def _read_chunk_data(self, chunk, fields):

FILE: yt/frontends/adaptahop/data_structures.py
  class AdaptaHOPParticleIndex (line 29) | class AdaptaHOPParticleIndex(ParticleIndex):
    method _setup_filenames (line 30) | def _setup_filenames(self):
  class AdaptaHOPDataset (line 51) | class AdaptaHOPDataset(Dataset):
    method __init__ (line 61) | def __init__(
    method _set_code_unit_attributes (line 89) | def _set_code_unit_attributes(self):
    method _guess_headers_from_file (line 95) | def _guess_headers_from_file(self, filename) -> None:
    method _parse_parameter_file (line 137) | def _parse_parameter_file(self):
    method _is_valid (line 172) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
    method halo (line 180) | def halo(self, halo_id, ptype="DM"):
  class AdaptaHOPHaloContainer (line 200) | class AdaptaHOPHaloContainer(YTSelectionContainer):
    method __init__ (line 274) | def __init__(self, ptype, particle_identifier, parent_ds, halo_ds):
    method __repr__ (line 296) | def __repr__(self):
    method __getitem__ (line 299) | def __getitem__(self, key):
    method ihalo (line 303) | def ihalo(self):
    method _set_halo_member_data (line 318) | def _set_halo_member_data(self):
    method _set_halo_properties (line 356) | def _set_halo_properties(self):

FILE: yt/frontends/adaptahop/definitions.py
  function HEADER_ATTRIBUTES (line 13) | def HEADER_ATTRIBUTES(*, double: bool, longint: bool) -> ATTR_T:
  class AdaptaHOPDefTemplate (line 29) | class AdaptaHOPDefTemplate:
    method __init_subclass__ (line 31) | def __init_subclass__(cls, *args, **kwargs):
    method __init__ (line 36) | def __init__(self, longint, double_precision):
  class AdaptaHOPOld (line 41) | class AdaptaHOPOld(AdaptaHOPDefTemplate):
    method HALO_ATTRIBUTES (line 43) | def HALO_ATTRIBUTES(self) -> ATTR_T:
  class AdaptaHOPNewNoContam (line 95) | class AdaptaHOPNewNoContam(AdaptaHOPDefTemplate):
    method HALO_ATTRIBUTES (line 97) | def HALO_ATTRIBUTES(self) -> ATTR_T:
  class AdaptaHOPNewContam (line 158) | class AdaptaHOPNewContam(AdaptaHOPNewNoContam):
    method HALO_ATTRIBUTES (line 160) | def HALO_ATTRIBUTES(self) -> ATTR_T:

FILE: yt/frontends/adaptahop/fields.py
  class AdaptaHOPFieldInfo (line 20) | class AdaptaHOPFieldInfo(FieldInfoContainer):
    method setup_particle_fields (line 59) | def setup_particle_fields(self, ptype):

FILE: yt/frontends/adaptahop/io.py
  class IOHandlerAdaptaHOPBinary (line 20) | class IOHandlerAdaptaHOPBinary(BaseParticleIOHandler):
    method _read_fluid_selection (line 26) | def _read_fluid_selection(self, chunks, selector, fields, size):
    method _read_chunk_data (line 29) | def _read_chunk_data(self, chunk, fields):
    method _yield_coordinates (line 32) | def _yield_coordinates(self, data_file):
    method _read_particle_coords (line 35) | def _read_particle_coords(self, chunks, ptf):
    method _read_particle_fields (line 50) | def _read_particle_fields(self, chunks, ptf, selector):
    method _count_particles (line 111) | def _count_particles(self, data_file):
    method _identify_fields (line 115) | def _identify_fields(self, data_file):
    method _get_particle_positions (line 128) | def _get_particle_positions(self):
    method members (line 176) | def members(self, ihalo):
    method _sorted_chunk_iterator (line 186) | def _sorted_chunk_iterator(self, chunks):
  function _todo_from_attributes (line 191) | def _todo_from_attributes(attributes: ATTR_T, halo_attributes: ATTR_T):
  function _find_attr_position (line 242) | def _find_attr_position(key, halo_attributes: ATTR_T) -> int:

FILE: yt/frontends/adaptahop/tests/test_outputs.py
  function test_opening (line 24) | def test_opening(brick):
  function test_field_access (line 37) | def test_field_access(brick):
  function test_get_halo (line 58) | def test_get_halo(brick):

FILE: yt/frontends/ahf/data_structures.py
  class AHFHalosFile (line 15) | class AHFHalosFile(HaloCatalogFile):
    method __init__ (line 16) | def __init__(self, ds, io, filename, file_id, range=None):
    method read_data (line 26) | def read_data(self, usecols=None):
    method _read_column_names (line 29) | def _read_column_names(self, filename):
    method _read_particle_positions (line 39) | def _read_particle_positions(self, ptype, f=None):
  class AHFHalosDataset (line 52) | class AHFHalosDataset(Dataset):
    method __init__ (line 57) | def __init__(
    method _set_code_unit_attributes (line 80) | def _set_code_unit_attributes(self):
    method _parse_parameter_file (line 86) | def _parse_parameter_file(self):
    method _is_valid (line 121) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
    method _read_log_simu (line 129) | def _read_log_simu(self):
    method _read_parameter (line 143) | def _read_parameter(self):
    method _skip_cache (line 158) | def _skip_cache(self):

FILE: yt/frontends/ahf/fields.py
  class AHFHalosFieldInfo (line 10) | class AHFHalosFieldInfo(FieldInfoContainer):

FILE: yt/frontends/ahf/io.py
  class IOHandlerAHFHalos (line 8) | class IOHandlerAHFHalos(BaseParticleIOHandler):
    method _read_fluid_selection (line 12) | def _read_fluid_selection(self, chunks, selector, fields, size):
    method _read_particle_coords (line 15) | def _read_particle_coords(self, chunks, ptf):
    method _yield_coordinates (line 28) | def _yield_coordinates(self, data_file):
    method _read_particle_fields (line 35) | def _read_particle_fields(self, chunks, ptf, selector):
    method _count_particles (line 63) | def _count_particles(self, data_file):
    method _identify_fields (line 71) | def _identify_fields(self, data_file):
    method _sorted_chunk_iterator (line 75) | def _sorted_chunk_iterator(self, chunks):

FILE: yt/frontends/ahf/tests/test_outputs.py
  function load (line 23) | def load(filename):
  function test_fields_ahf_halos (line 28) | def test_fields_ahf_halos():
  function test_AHFHalosDataset (line 36) | def test_AHFHalosDataset():

FILE: yt/frontends/amrex/data_structures.py
  class BoxlibGrid (line 60) | class BoxlibGrid(AMRGridPatch):
    method __init__ (line 64) | def __init__(self, grid_id, offset, filename=None, index=None):
    method _prepare_grid (line 71) | def _prepare_grid(self):
    method get_global_startindex (line 76) | def get_global_startindex(self):
    method _setup_dx (line 79) | def _setup_dx(self):
    method Parent (line 85) | def Parent(self):
    method Children (line 91) | def Children(self):
    method _get_offset (line 94) | def _get_offset(self, f):
    method select_ires (line 104) | def select_ires(self, dobj):
    method _fill_child_mask (line 113) | def _fill_child_mask(self, child, mask, tofill, dlevel=1):
  class BoxLibParticleHeader (line 130) | class BoxLibParticleHeader:
    method __init__ (line 131) | def __init__(self, ds, directory_name, is_checkpoint, extra_field_name...
    method _generate_particle_fields (line 187) | def _generate_particle_fields(self, extra_field_names):
  class AMReXParticleHeader (line 235) | class AMReXParticleHeader:
    method __init__ (line 236) | def __init__(self, ds, directory_name, is_checkpoint, extra_field_name...
    method _generate_particle_fields (line 293) | def _generate_particle_fields(self):
  class BoxlibHierarchy (line 334) | class BoxlibHierarchy(GridIndex):
    method __init__ (line 337) | def __init__(self, ds, dataset_type="boxlib_native"):
    method _parse_index (line 346) | def _parse_index(self):
    method _cache_endianness (line 458) | def _cache_endianness(self, test_grid):
    method _populate_grid_objects (line 494) | def _populate_grid_objects(self):
    method _reconstruct_parent_child (line 505) | def _reconstruct_parent_child(self):
    method _count_grids (line 527) | def _count_grids(self):
    method _initialize_grid_arrays (line 546) | def _initialize_grid_arrays(self):
    method _initialize_state_variables (line 550) | def _initialize_state_variables(self):
    method _detect_output_fields (line 556) | def _detect_output_fields(self):
    method _setup_data_io (line 564) | def _setup_data_io(self):
    method _determine_particle_output_type (line 567) | def _determine_particle_output_type(self, directory_name):
    method _read_particles (line 576) | def _read_particles(self, directory_name, is_checkpoint, extra_field_n...
  class BoxlibDataset (line 615) | class BoxlibDataset(Dataset):
    method __init__ (line 626) | def __init__(
    method _localize_check (line 670) | def _localize_check(self, fn):
    method _is_valid (line 681) | def _is_valid(cls, filename, *args, cparam_filename=None, **kwargs):
    method _lookup_cparam_filepath (line 705) | def _lookup_cparam_filepath(cls, output_dir, cparam_filename):
    method unique_identifier (line 718) | def unique_identifier(self) -> str:
    method _parse_parameter_file (line 722) | def _parse_parameter_file(self):
    method _parse_cparams (line 734) | def _parse_cparams(self):
    method _parse_fparams (line 780) | def _parse_fparams(self):
    method _parse_header_file (line 806) | def _parse_header_file(self):
    method _set_code_unit_attributes (line 914) | def _set_code_unit_attributes(self):
    method print_key_parameters (line 921) | def print_key_parameters(self):
    method relative_refinement (line 934) | def relative_refinement(self, l0, l1):
  class AMReXHierarchy (line 939) | class AMReXHierarchy(BoxlibHierarchy):
    method __init__ (line 940) | def __init__(self, ds, dataset_type="boxlib_native"):
  class AMReXDataset (line 949) | class AMReXDataset(BoxlibDataset):
    method _parse_parameter_file (line 954) | def _parse_parameter_file(self):
  class OrionHierarchy (line 964) | class OrionHierarchy(BoxlibHierarchy):
    method __init__ (line 965) | def __init__(self, ds, dataset_type="orion_native"):
    method _detect_output_fields (line 970) | def _detect_output_fields(self):
    method _read_particles (line 991) | def _read_particles(self):
    method _read_particle_file (line 1005) | def _read_particle_file(self, fn):
  class OrionDataset (line 1050) | class OrionDataset(BoxlibDataset):
    method __init__ (line 1055) | def __init__(
  class CastroHierarchy (line 1078) | class CastroHierarchy(BoxlibHierarchy):
    method __init__ (line 1079) | def __init__(self, ds, dataset_type="castro_native"):
  class CastroDataset (line 1100) | class CastroDataset(AMReXDataset):
    method __init__ (line 1106) | def __init__(
    method _parse_parameter_file (line 1128) | def _parse_parameter_file(self):
  class MaestroDataset (line 1169) | class MaestroDataset(AMReXDataset):
    method __init__ (line 1175) | def __init__(
    method _parse_parameter_file (line 1197) | def _parse_parameter_file(self):
  class NyxHierarchy (line 1223) | class NyxHierarchy(BoxlibHierarchy):
    method __init__ (line 1224) | def __init__(self, ds, dataset_type="nyx_native"):
  class NyxDataset (line 1246) | class NyxDataset(BoxlibDataset):
    method __init__ (line 1252) | def __init__(
    method _parse_parameter_file (line 1274) | def _parse_parameter_file(self):
    method _set_code_unit_attributes (line 1321) | def _set_code_unit_attributes(self):
  class QuokkaDataset (line 1330) | class QuokkaDataset(AMReXDataset):
  function _guess_pcast (line 1336) | def _guess_pcast(vals):
  function _read_raw_field_names (line 1362) | def _read_raw_field_names(raw_file):
  function _string_to_numpy_array (line 1367) | def _string_to_numpy_array(s):
  function _line_to_numpy_arrays (line 1371) | def _line_to_numpy_arrays(line):
  function _get_active_dimensions (line 1378) | def _get_active_dimensions(box):
  function _read_header (line 1382) | def _read_header(raw_file, field):
  class WarpXHeader (line 1438) | class WarpXHeader:
    method __init__ (line 1439) | def __init__(self, header_fn):
  class WarpXHierarchy (line 1485) | class WarpXHierarchy(BoxlibHierarchy):
    method __init__ (line 1486) | def __init__(self, ds, dataset_type="boxlib_native"):
    method _detect_output_fields (line 1504) | def _detect_output_fields(self):
  function _skip_line (line 1521) | def _skip_line(line):
  class WarpXDataset (line 1532) | class WarpXDataset(BoxlibDataset):
    method __init__ (line 1538) | def __init__(
    method _parse_parameter_file (line 1562) | def _parse_parameter_file(self):
    method _set_code_unit_attributes (line 1596) | def _set_code_unit_attributes(self):

FILE: yt/frontends/amrex/fields.py
  function _thermal_energy_density (line 16) | def _thermal_energy_density(data):
  function _specific_thermal_energy (line 33) | def _specific_thermal_energy(data):
  function _temperature (line 38) | def _temperature(data):
  class WarpXFieldInfo (line 47) | class WarpXFieldInfo(FieldInfoContainer):
    method __init__ (line 79) | def __init__(self, ds, field_list):
    method setup_fluid_fields (line 87) | def setup_fluid_fields(self):
    method setup_fluid_aliases (line 92) | def setup_fluid_aliases(self):
    method setup_particle_fields (line 95) | def setup_particle_fields(self, ptype):
  class NyxFieldInfo (line 178) | class NyxFieldInfo(FieldInfoContainer):
  class BoxlibFieldInfo (line 186) | class BoxlibFieldInfo(FieldInfoContainer):
    method setup_particle_fields (line 225) | def setup_particle_fields(self, ptype):
    method setup_fluid_fields (line 245) | def setup_fluid_fields(self):
    method setup_momentum_to_velocity (line 272) | def setup_momentum_to_velocity(self):
    method setup_velocity_to_momentum (line 287) | def setup_velocity_to_momentum(self):
  class CastroFieldInfo (line 303) | class CastroFieldInfo(FieldInfoContainer):
    method setup_fluid_fields (line 356) | def setup_fluid_fields(self):
  class MaestroFieldInfo (line 380) | class MaestroFieldInfo(FieldInfoContainer):
    method setup_fluid_fields (line 444) | def setup_fluid_fields(self):
  class Substance (line 512) | class Substance:
    method __init__ (line 513) | def __init__(self, data: str) -> None:
    method get_spec (line 525) | def get_spec(self) -> SubstanceSpec:
    method is_isotope (line 528) | def is_isotope(self) -> bool:
    method is_molecule (line 531) | def is_molecule(self) -> bool:
    method is_descriptive_name (line 534) | def is_descriptive_name(self) -> bool:
    method __str__ (line 537) | def __str__(self) -> str:
    method _to_tex_isotope (line 542) | def _to_tex_isotope(self) -> str:
    method _to_tex_molecule (line 546) | def _to_tex_molecule(self) -> str:
    method _to_tex_descriptive (line 552) | def _to_tex_descriptive(self) -> str:
    method to_tex (line 555) | def to_tex(self) -> str:
  function _create_density_func (line 567) | def _create_density_func(field_name):

FILE: yt/frontends/amrex/io.py
  function _remove_raw (line 12) | def _remove_raw(all_fields, raw_fields):
  class IOHandlerBoxlib (line 19) | class IOHandlerBoxlib(BaseIOHandler):
    method __init__ (line 22) | def __init__(self, ds, *args, **kwargs):
    method _read_fluid_selection (line 25) | def _read_fluid_selection(self, chunks, selector, fields, size):
    method _read_raw_field (line 61) | def _read_raw_field(self, grid, field):
    method _read_chunk_data (line 90) | def _read_chunk_data(self, chunk, fields):
    method _read_particle_coords (line 123) | def _read_particle_coords(self, chunks, ptf):
    method _read_particle_fields (line 129) | def _read_particle_fields(self, chunks, ptf, selector):
  class IOHandlerOrion (line 202) | class IOHandlerOrion(IOHandlerBoxlib):
    method particle_filename (line 208) | def particle_filename(self):
    method particle_field_index (line 218) | def particle_field_index(self):
    method _read_particle_selection (line 224) | def _read_particle_selection(self, chunks, selector, fields):
    method _read_particles (line 247) | def _read_particles(self, grid, field):

FILE: yt/frontends/amrex/tests/test_field_parsing.py
  function test_Substance_spec (line 17) | def test_Substance_spec(data, expected):
  function test_Substance_type (line 32) | def test_Substance_type(data, expected_type):
  function test_Substance_to_str (line 48) | def test_Substance_to_str(data, expected_str, expected_tex):

FILE: yt/frontends/amrex/tests/test_outputs.py
  function test_radadvect (line 48) | def test_radadvect():
  function test_radtube (line 60) | def test_radtube():
  function test_star (line 72) | def test_star():
  function test_LyA (line 84) | def test_LyA():
  function test_nyx_particle_io (line 95) | def test_nyx_particle_io():
  function test_RT_particles (line 144) | def test_RT_particles():
  function test_castro_particle_io (line 153) | def test_castro_particle_io():
  function test_langmuir (line 193) | def test_langmuir():
  function test_plasma (line 207) | def test_plasma():
  function test_beam (line 221) | def test_beam():
  function test_warpx_particle_io (line 237) | def test_warpx_particle_io():
  function test_raw_fields (line 294) | def test_raw_fields():
  function test_OrionDataset (line 300) | def test_OrionDataset():
  function test_NyxDataset (line 305) | def test_NyxDataset():
  function test_NyxDataset_2 (line 310) | def test_NyxDataset_2():
  function test_CastroDataset (line 315) | def test_CastroDataset():
  function test_CastroDataset_2 (line 320) | def test_CastroDataset_2():
  function test_CastroDataset_3 (line 325) | def test_CastroDataset_3():
  function test_WarpXDataset (line 330) | def test_WarpXDataset():
  function test_magnetic_units (line 336) | def test_magnetic_units():
  function test_WarpXDataset_2 (line 352) | def test_WarpXDataset_2():
  function test_AMReXDataset (line 357) | def test_AMReXDataset():
  function test_units_override (line 363) | def test_units_override():
  function test_nyx_no_part (line 371) | def test_nyx_no_part():
  function test_maestro_parameters (line 421) | def test_maestro_parameters():
  function check_coordsys_data (line 451) | def check_coordsys_data(ds):
  function test_coordsys_1d_cylindrical (line 474) | def test_coordsys_1d_cylindrical():
  function test_coordsys_2d_cylindrical (line 482) | def test_coordsys_2d_cylindrical():
  function test_coordsys_1d_spherical (line 490) | def test_coordsys_1d_spherical():
  function test_coordsys_2d_spherical (line 498) | def test_coordsys_2d_spherical():

FILE: yt/frontends/amrvac/data_structures.py
  function _parse_geometry (line 30) | def _parse_geometry(geometry_tag: str) -> Geometry:
  class AMRVACGrid (line 55) | class AMRVACGrid(AMRGridPatch):
    method __init__ (line 60) | def __init__(self, id, index, level):
    method get_global_startindex (line 67) | def get_global_startindex(self):
    method retrieve_ghost_zones (line 78) | def retrieve_ghost_zones(self, n_zones, fields, all_levels=False, smoo...
  class AMRVACHierarchy (line 92) | class AMRVACHierarchy(GridIndex):
    method __init__ (line 95) | def __init__(self, ds, dataset_type="amrvac"):
    method _detect_output_fields (line 105) | def _detect_output_fields(self):
    method _count_grids (line 111) | def _count_grids(self):
    method _parse_index (line 115) | def _parse_index(self):
    method _populate_grid_objects (line 157) | def _populate_grid_objects(self):
  class AMRVACDataset (line 164) | class AMRVACDataset(Dataset):
    method __init__ (line 168) | def __init__(
    method _is_valid (line 273) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
    method _parse_parameter_file (line 297) | def _parse_parameter_file(self):
    method _set_code_unit_attributes (line 373) | def _set_code_unit_attributes(self):
    method _validate_units_override_keys (line 468) | def _validate_units_override_keys(cls, units_override):

FILE: yt/frontends/amrvac/datfile_utils.py
  function get_header (line 15) | def get_header(istream):
  function get_tree_info (line 106) | def get_tree_info(istream):
  function get_single_block_data (line 141) | def get_single_block_data(istream, byte_offset, block_shape):
  function get_single_block_field_data (line 152) | def get_single_block_field_data(istream, byte_offset, block_shape, field...

FILE: yt/frontends/amrvac/fields.py
  function _velocity (line 26) | def _velocity(field, data, idir, prefix=None):
  class AMRVACFieldInfo (line 58) | class AMRVACFieldInfo(FieldInfoContainer):
    method _setup_velocity_fields (line 90) | def _setup_velocity_fields(self, idust=None):
    method _setup_dust_fields (line 120) | def _setup_dust_fields(self):
    method setup_fluid_fields (line 162) | def setup_fluid_fields(self):

FILE: yt/frontends/amrvac/io.py
  function read_amrvac_namelist (line 18) | def read_amrvac_namelist(parfiles):
  class AMRVACIOHandler (line 57) | class AMRVACIOHandler(BaseIOHandler):
    method __init__ (line 61) | def __init__(self, ds):
    method _read_particle_coords (line 68) | def _read_particle_coords(self, chunks, ptf):
    method _read_particle_fields (line 75) | def _read_particle_fields(self, chunks, ptf, selector):
    method _read_data (line 84) | def _read_data(self, fid, grid, field):
    method _read_fluid_selection (line 117) | def _read_fluid_selection(self, chunks, selector, fields, size):
    method _read_chunk_data (line 181) | def _read_chunk_data(self, chunk, fields):

FILE: yt/frontends/amrvac/tests/test_outputs.py
  function _get_fields_to_check (line 24) | def _get_fields_to_check(ds):
  function test_AMRVACDataset (line 38) | def test_AMRVACDataset():
  function test_domain_size (line 43) | def test_domain_size():
  function test_grid_attributes (line 55) | def test_grid_attributes():
  function test_bw_polar_2d (line 69) | def test_bw_polar_2d():
  function test_blastwave_cartesian_3D (line 77) | def test_blastwave_cartesian_3D():
  function test_blastwave_spherical_2D (line 85) | def test_blastwave_spherical_2D():
  function test_blastwave_cylindrical_3D (line 93) | def test_blastwave_cylindrical_3D():
  function test_khi_cartesian_2D (line 101) | def test_khi_cartesian_2D():
  function test_khi_cartesian_3D (line 109) | def test_khi_cartesian_3D():
  function test_jet_cylindrical_25D (line 117) | def test_jet_cylindrical_25D():
  function test_riemann_cartesian_175D (line 125) | def test_riemann_cartesian_175D():
  function test_rmi_cartesian_dust_2D (line 133) | def test_rmi_cartesian_dust_2D():

FILE: yt/frontends/amrvac/tests/test_read_amrvac_namelist.py
  function test_read_pathlike (line 15) | def test_read_pathlike():
  function test_read_one_file (line 20) | def test_read_one_file():
  function test_accumulate_basename (line 29) | def test_accumulate_basename():

FILE: yt/frontends/amrvac/tests/test_units_override.py
  function _assert_normalisations_equal (line 23) | def _assert_normalisations_equal(ds):
  function test_normalisations_length_temp_nb (line 35) | def test_normalisations_length_temp_nb():
  function test_normalisations_length_temp_mass (line 47) | def test_normalisations_length_temp_mass():
  function test_normalisations_length_time_mass (line 59) | def test_normalisations_length_time_mass():
  function test_normalisations_length_vel_nb (line 71) | def test_normalisations_length_vel_nb():
  function test_normalisations_length_vel_mass (line 83) | def test_normalisations_length_vel_mass():
  function test_normalisations_default (line 95) | def test_normalisations_default():
  function test_normalisations_too_many_args (line 115) | def test_normalisations_too_many_args():
  function test_normalisations_vel_and_length (line 128) | def test_normalisations_vel_and_length():

FILE: yt/frontends/arepo/data_structures.py
  class ArepoHDF5Dataset (line 10) | class ArepoHDF5Dataset(GadgetHDF5Dataset):
    method __init__ (line 14) | def __init__(
    method _is_valid (line 48) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
    method _get_uvals (line 72) | def _get_uvals(self):
    method _set_code_unit_attributes (line 93) | def _set_code_unit_attributes(self):

FILE: yt/frontends/arepo/fields.py
  class ArepoFieldInfo (line 10) | class ArepoFieldInfo(GadgetFieldInfo):
    method __init__ (line 11) | def __init__(self, ds, field_list, slice_info=None):
    method setup_particle_fields (line 49) | def setup_particle_fields(self, ptype, *args, **kwargs):
    method setup_gas_particle_fields (line 55) | def setup_gas_particle_fields(self, ptype):

FILE: yt/frontends/arepo/io.py
  class IOHandlerArepoHDF5 (line 7) | class IOHandlerArepoHDF5(IOHandlerGadgetHDF5):
    method _generate_smoothing_length (line 10) | def _generate_smoothing_length(self, index):
    method _get_smoothing_length (line 14) | def _get_smoothing_length(self, data_file, position_dtype, position_sh...

FILE: yt/frontends/arepo/tests/test_outputs.py
  function test_arepo_hdf5_selection (line 20) | def test_arepo_hdf5_selection():
  function test_arepo_bullet (line 39) | def test_arepo_bullet():
  function test_arepo_tng59 (line 64) | def test_arepo_tng59():
  function test_arepo_tng59_periodicity (line 73) | def test_arepo_tng59_periodicity():
  function test_nh_density (line 82) | def test_nh_density():
  function test_arepo_tng59_selection (line 92) | def test_arepo_tng59_selection():
  function test_arepo_cr (line 109) | def test_arepo_cr():

FILE: yt/frontends/art/data_structures.py
  class ARTIndex (line 37) | class ARTIndex(OctreeIndex):
    method __init__ (line 38) | def __init__(self, ds, dataset_type="art"):
    method get_smallest_dx (line 48) | def get_smallest_dx(self):
    method _initialize_oct_handler (line 56) | def _initialize_oct_handler(self):
    method _detect_output_fields (line 80) | def _detect_output_fields(self):
    method _identify_base_chunk (line 89) | def _identify_base_chunk(self, dobj):
    method _chunk_all (line 107) | def _chunk_all(self, dobj):
    method _chunk_spatial (line 113) | def _chunk_spatial(self, dobj, ngz, sort=None, preload_fields=None):
    method _chunk_io (line 122) | def _chunk_io(self, dobj, cache=True, local_only=False):
  class ARTDataset (line 134) | class ARTDataset(Dataset):
    method __init__ (line 138) | def __init__(
    method _find_files (line 182) | def _find_files(self, file_amr):
    method __str__ (line 207) | def __str__(self):
    method _set_code_unit_attributes (line 210) | def _set_code_unit_attributes(self):
    method _parse_parameter_file (line 244) | def _parse_parameter_file(self):
    method create_field_info (line 366) | def create_field_info(self):
    method _is_valid (line 377) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
  class ARTParticleFile (line 396) | class ARTParticleFile(ParticleFile):
    method __init__ (line 397) | def __init__(self, ds, io, filename, file_id):
  class ARTParticleIndex (line 411) | class ARTParticleIndex(ParticleIndex):
    method _setup_filenames (line 412) | def _setup_filenames(self):
  class DarkMatterARTDataset (line 425) | class DarkMatterARTDataset(ARTDataset):
    method __init__ (line 430) | def __init__(
    method _find_files (line 467) | def _find_files(self, file_particle):
    method __str__ (line 492) | def __str__(self):
    method _set_code_unit_attributes (line 495) | def _set_code_unit_attributes(self):
    method _parse_parameter_file (line 527) | def _parse_parameter_file(self):
    method create_field_info (line 664) | def create_field_info(self):
    method _is_valid (line 672) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
  class ARTDomainSubset (line 733) | class ARTDomainSubset(OctreeSubset):
    method oct_handler (line 735) | def oct_handler(self):
    method fill (line 738) | def fill(self, content, ftfields, selector):
  class ARTDomainFile (line 791) | class ARTDomainFile:
    method __init__ (line 802) | def __init__(self, ds, nvar, oct_handler, domain_id):
    method oct_handler (line 812) | def oct_handler(self):
    method level_count (line 816) | def level_count(self):
    method level_child_offsets (line 824) | def level_child_offsets(self):
    method level_offsets (line 831) | def level_offsets(self):
    method _count_art_octs (line 857) | def _count_art_octs(self, f, offset, MinLev, MaxLevelNow):
    method _read_amr_level (line 897) | def _read_amr_level(self, oct_handler):
    method _read_amr_root (line 923) | def _read_amr_root(self, oct_handler):
    method included (line 949) | def included(self, selector):

FILE: yt/frontends/art/fields.py
  class ARTFieldInfo (line 13) | class ARTFieldInfo(FieldInfoContainer):
    method setup_fluid_fields (line 45) | def setup_fluid_fields(self):

FILE: yt/frontends/art/io.py
  class IOHandlerART (line 19) | class IOHandlerART(BaseIOHandler):
    method __init__ (line 26) | def __init__(self, *args, **kwargs):
    method _read_fluid_selection (line 36) | def _read_fluid_selection(self, chunks, selector, fields, size):
    method _get_mask (line 67) | def _get_mask(self, selector, ftype):
    method _read_particle_coords (line 80) | def _read_particle_coords(self, chunks, ptf):
    method _read_particle_fields (line 89) | def _read_particle_fields(self, chunks, ptf, selector):
    method _get_field (line 103) | def _get_field(self, field):
  class IOHandlerDarkMatterART (line 177) | class IOHandlerDarkMatterART(IOHandlerART):
    method _count_particles (line 180) | def _count_particles(self, data_file):
    method _identify_fields (line 186) | def _identify_fields(self, domain):
    method _get_field (line 195) | def _get_field(self, field):
    method _yield_coordinates (line 250) | def _yield_coordinates(self, data_file):
  function _determine_field_size (line 259) | def _determine_field_size(pf, field, lspecies, ptmax):
  function interpolate_ages (line 279) | def interpolate_ages(
  function _read_art_level_info (line 297) | def _read_art_level_info(
  function get_ranges (line 406) | def get_ranges(
  function read_particles (line 436) | def read_particles(file, Nrow, idxa, idxb, fields):
  function read_star_field (line 465) | def read_star_field(file, field=None):
  function _read_child_mask_level (line 479) | def _read_child_mask_level(f, level_child_offsets, level, nLevel, nhydro...
  function _read_child_level (line 507) | def _read_child_level(
  function _read_root_level (line 557) | def _read_root_level(f, level_offsets, level_info, nhydro_vars=10):
  function find_root (line 574) | def find_root(f, a, b, tol=1e-6):
  function quad (line 588) | def quad(fintegrand, xmin, xmax, n=1e4):
  function a2b (line 597) | def a2b(at, Om0=0.27, Oml0=0.73, h=0.700):
  function b2a (line 608) | def b2a(bt, **kwargs):
  function a2t (line 620) | def a2t(at, Om0=0.27, Oml0=0.73, h=0.700):
  function b2t (line 629) | def b2t(tb, n=1e2, logger=None, **kwargs):

FILE: yt/frontends/art/tests/test_outputs.py
  function test_d9p (line 30) | def test_d9p():
  function test_d9p_global_values (line 52) | def test_d9p_global_values():
  function test_ARTDataset (line 118) | def test_ARTDataset():
  function test_units_override (line 123) | def test_units_override():
  function test_particle_selection (line 128) | def test_particle_selection():

FILE: yt/frontends/artio/artio_headers/artio.c
  type __int64 (line 31) | typedef __int64 int64_t;
  type __int32 (line 32) | typedef __int32 int32_t;
  function artio_fileset_set_buffer_size (line 43) | int artio_fileset_set_buffer_size( int buffer_size ) {
  function artio_fileset (line 52) | artio_fileset *artio_fileset_open(char * file_prefix, int type, const ar...
  function artio_fileset (line 138) | artio_fileset *artio_fileset_create(char * file_prefix, int64_t root_cells,
  function artio_fileset_close (line 173) | int artio_fileset_close(artio_fileset *handle) {
  function artio_fileset (line 213) | artio_fileset *artio_fileset_allocate( char *file_prefix, int mode,
  function artio_fileset_destroy (line 258) | void artio_fileset_destroy( artio_fileset *handle ) {
  function artio_fileset_has_grid (line 278) | int artio_fileset_has_grid( artio_fileset *handle ) {
  function artio_fileset_has_particles (line 285) | int artio_fileset_has_particles( artio_fileset *handle ) {

FILE: yt/frontends/artio/artio_headers/artio.h
  type __int64 (line 34) | typedef __int64 int64_t;
  type __int32 (line 35) | typedef __int32 int32_t;
  type artio_context (line 117) | typedef struct {
  type artio_context (line 121) | typedef struct {
  type artio_fileset (line 128) | typedef struct artio_fileset_struct artio_fileset;
  type artio_selection (line 129) | typedef struct artio_selection_struct artio_selection;

FILE: yt/frontends/artio/artio_headers/artio_endian.c
  type __int64 (line 26) | typedef __int64 int64_t;
  type __int32 (line 27) | typedef __int32 int32_t;
  function artio_int_swap (line 32) | void artio_int_swap(int32_t *src, int count) {
  function artio_float_swap (line 49) | void artio_float_swap(float *src, int count) {
  function artio_double_swap (line 66) | void artio_double_swap(double *src, int count) {
  function artio_long_swap (line 88) | void artio_long_swap(int64_t *src, int count) {

FILE: yt/frontends/artio/artio_headers/artio_endian.h
  type __int64 (line 27) | typedef __int64 int64_t;
  type __int32 (line 28) | typedef __int32 int32_t;

FILE: yt/frontends/artio/artio_headers/artio_file.c
  function artio_fh (line 29) | artio_fh *artio_file_fopen( char * filename, int mode, const artio_conte...
  function artio_file_attach_buffer (line 42) | int artio_file_attach_buffer( artio_fh *handle, void *buf, int buf_size ) {
  function artio_file_detach_buffer (line 57) | int artio_file_detach_buffer( artio_fh *handle ) {
  function artio_file_fwrite (line 71) | int artio_file_fwrite( artio_fh *handle, const void *buf, int64_t count,...
  function artio_file_fflush (line 86) | int artio_file_fflush(artio_fh *handle) {
  function artio_file_fread (line 100) | int artio_file_fread(artio_fh *handle, void *buf, int64_t count, int typ...
  function artio_file_ftell (line 115) | int artio_file_ftell(artio_fh *handle, int64_t *offset) {
  function artio_file_fseek (line 130) | int artio_file_fseek(artio_fh *handle, int64_t offset, int whence ) {
  function artio_file_fclose (line 145) | int artio_file_fclose(artio_fh *handle) {
  function artio_file_set_endian_swap_tag (line 159) | void artio_file_set_endian_swap_tag(artio_fh *handle) {

FILE: yt/frontends/artio/artio_headers/artio_grid.c
  type __int64 (line 31) | typedef __int64 int64_t;
  type __int32 (line 32) | typedef __int32 int32_t;
  function artio_fileset_open_grid (line 51) | int artio_fileset_open_grid(artio_fileset *handle) {
  function artio_fileset_add_grid (line 137) | int artio_fileset_add_grid(artio_fileset *handle,
  function artio_grid_file (line 344) | artio_grid_file *artio_grid_file_allocate(void) {
  function artio_grid_file_destroy (line 382) | void artio_grid_file_destroy(artio_grid_file *ghandle) {
  function artio_fileset_close_grid (line 405) | int artio_fileset_close_grid(artio_fileset *handle) {
  function artio_grid_count_octs_in_sfc_range (line 420) | int artio_grid_count_octs_in_sfc_range(artio_fileset *handle,
  function artio_grid_cache_sfc_range (line 526) | int artio_grid_cache_sfc_range(artio_fileset *handle, int64_t start, int...
  function artio_grid_clear_sfc_cache (line 598) | int artio_grid_clear_sfc_cache( artio_fileset *handle ) {
  function artio_grid_find_file (line 624) | int artio_grid_find_file(artio_grid_file *ghandle, int start, int end, i...
  function artio_grid_seek_to_sfc (line 656) | int artio_grid_seek_to_sfc(artio_fileset *handle, int64_t sfc) {
  function artio_grid_write_root_cell_begin (line 694) | int artio_grid_write_root_cell_begin(artio_fileset *handle, int64_t sfc,
  function artio_grid_write_root_cell_end (line 743) | int artio_grid_write_root_cell_end(artio_fileset *handle) {
  function artio_grid_write_level_begin (line 758) | int artio_grid_write_level_begin(artio_fileset *handle, int level) {
  function artio_grid_write_level_end (line 782) | int artio_grid_write_level_end(artio_fileset *handle) {
  function artio_grid_write_oct (line 808) | int artio_grid_write_oct(artio_fileset *handle, float *variables,
  function artio_grid_read_root_cell_begin (line 856) | int artio_grid_read_root_cell_begin(artio_fileset *handle, int64_t sfc,
  function artio_grid_read_oct (line 948) | int artio_grid_read_oct(artio_fileset *handle,
  function artio_grid_read_level_begin (line 1033) | int artio_grid_read_level_begin(artio_fileset *handle, int level) {
  function artio_grid_read_level_end (line 1111) | int artio_grid_read_level_end(artio_fileset *handle) {
  function artio_grid_read_root_cell_end (line 1139) | int artio_grid_read_root_cell_end(artio_fileset *handle) {
  function artio_grid_read_sfc_range_levels (line 1157) | int artio_grid_read_sfc_range_levels(artio_fileset *handle,
  function artio_grid_read_sfc_range (line 1279) | int artio_grid_read_sfc_range(artio_fileset *handle,
  function artio_grid_read_selection (line 1299) | int artio_grid_read_selection(artio_fileset *handle,
  function artio_grid_read_selection_levels (line 1316) | int artio_grid_read_selection_levels( artio_fileset *handle,

FILE: yt/frontends/artio/artio_headers/artio_internal.h
  type __int64 (line 34) | typedef __int64 int64_t;
  type __int32 (line 35) | typedef __int32 int32_t;
  type artio_fh (line 66) | typedef struct ARTIO_FH artio_fh;
  type artio_particle_file (line 68) | typedef struct artio_particle_file_struct {
  type artio_grid_file (line 91) | typedef struct artio_grid_file_struct {
  type parameter (line 124) | typedef struct parameter_struct {
  type parameter_list (line 133) | typedef struct parameter_list_struct {
  type artio_fileset_struct (line 140) | struct artio_fileset_struct {
  type artio_selection_struct (line 162) | struct artio_selection_struct {

FILE: yt/frontends/artio/artio_headers/artio_mpi.c
  type __int64 (line 33) | typedef __int64 int64_t;
  type __int32 (line 34) | typedef __int32 int32_t;
  type ARTIO_FH (line 42) | struct ARTIO_FH {
  function artio_fh (line 52) | artio_fh *artio_file_fopen_i( char * filename, int mode, const artio_con...
  function artio_file_attach_buffer_i (line 102) | int artio_file_attach_buffer_i( artio_fh *handle, void *buf, int buf_siz...
  function artio_file_detach_buffer_i (line 119) | int artio_file_detach_buffer_i( artio_fh *handle ) {
  function artio_file_fwrite_i (line 132) | int artio_file_fwrite_i( artio_fh *handle, const void *buf, int64_t coun...
  function artio_file_fflush_i (line 195) | int artio_file_fflush_i(artio_fh *handle) {
  function artio_file_fread_i (line 218) | int artio_file_fread_i(artio_fh *handle, void *buf, int64_t count, int t...
  function artio_file_ftell_i (line 316) | int artio_file_ftell_i(artio_fh *handle, int64_t *offset) {
  function artio_file_fseek_i (line 331) | int artio_file_fseek_i(artio_fh *handle, int64_t offset, int whence ) {
  function artio_file_fclose_i (line 387) | int artio_file_fclose_i(artio_fh *handle) {
  function artio_file_set_endian_swap_tag_i (line 397) | void artio_file_set_endian_swap_tag_i(artio_fh *handle) {

FILE: yt/frontends/artio/artio_headers/artio_mpi.h
  type artio_context_struct (line 13) | struct artio_context_struct {

FILE: yt/frontends/artio/artio_headers/artio_parameter.c
  type __int64 (line 30) | typedef __int64 int64_t;
  type __int32 (line 31) | typedef __int32 int32_t;
  function artio_type_size (line 36) | size_t artio_type_size(int type) {
  function parameter_list (line 64) | parameter_list *artio_parameter_list_init() {
  function artio_parameter_read (line 75) | int artio_parameter_read(artio_fh *handle, parameter_list *parameters) {
  function artio_parameter_write (line 137) | int artio_parameter_write(artio_fh *handle, parameter_list *parameters) {
  function artio_parameter_iterate (line 173) | int artio_parameter_iterate( artio_fileset *handle,
  function parameter (line 197) | parameter *artio_parameter_list_search(parameter_list * parameters, cons...
  function artio_parameter_list_insert (line 205) | int artio_parameter_list_insert(parameter_list * parameters, const char ...
  function artio_parameter_list_unpack (line 253) | int artio_parameter_list_unpack(parameter_list *parameters,
  function artio_parameter_list_unpack_index (line 275) | int artio_parameter_list_unpack_index(parameter_list *parameters,
  function artio_parameter_array_length (line 302) | int artio_parameter_array_length( parameter *item ) {
  function artio_parameter_get_array_length (line 319) | int artio_parameter_get_array_length(artio_fileset *handle, const char *...
  function artio_parameter_list_free (line 331) | int artio_parameter_list_free(parameter_list * parameters) {
  function artio_parameter_list_print (line 353) | int artio_parameter_list_print(parameter_list * parameters) {
  function artio_parameter_set_int (line 393) | int artio_parameter_set_int(artio_fileset *handle, const char * key, int...
  function artio_parameter_get_int (line 398) | int artio_parameter_get_int(artio_fileset *handle, const char * key, int...
  function artio_parameter_set_int_array (line 402) | int artio_parameter_set_int_array(artio_fileset *handle, const char * ke...
  function artio_parameter_get_int_array (line 408) | int artio_parameter_get_int_array(artio_fileset *handle, const char * ke...
  function artio_parameter_get_int_array_index (line 414) | int artio_parameter_get_int_array_index( artio_fileset *handle, const ch...
  function artio_parameter_set_float (line 420) | int artio_parameter_set_float(artio_fileset *handle, const char * key, f...
  function artio_parameter_get_float (line 425) | int artio_parameter_get_float(artio_fileset *handle, const char * key, f...
  function artio_parameter_set_float_array (line 429) | int artio_parameter_set_float_array(artio_fileset *handle, const char * ...
  function artio_parameter_get_float_array (line 435) | int artio_parameter_get_float_array(artio_fileset *handle, const char * ...
  function artio_parameter_get_float_array_index (line 441) | int artio_parameter_get_float_array_index(artio_fileset *handle, const c...
  function artio_parameter_set_double (line 447) | int artio_parameter_set_double(artio_fileset *handle, const char * key, ...
  function artio_parameter_get_double (line 452) | int artio_parameter_get_double(artio_fileset *handle, const char * key, ...
  function artio_parameter_set_double_array (line 456) | int artio_parameter_set_double_array(artio_fileset *handle, const char *...
  function artio_parameter_get_double_array (line 462) | int artio_parameter_get_double_array(artio_fileset *handle, const char *...
  function artio_parameter_get_double_array_index (line 468) | int artio_parameter_get_double_array_index(artio_fileset *handle, const ...
  function artio_parameter_set_long (line 474) | int artio_parameter_set_long(artio_fileset *handle, const char * key, in...
  function artio_parameter_get_long (line 479) | int artio_parameter_get_long(artio_fileset *handle, const char * key, in...
  function artio_parameter_set_long_array (line 483) | int artio_parameter_set_long_array(artio_fileset *handle, const char * key,
  function artio_parameter_get_long_array (line 489) | int artio_parameter_get_long_array(artio_fileset *handle, const char * key,
  function artio_parameter_get_long_array_index (line 495) | int artio_parameter_get_long_array_index(artio_fileset *handle, const ch...
  function artio_parameter_set_string (line 501) | int artio_parameter_set_string(artio_fileset *handle, const char *key, c...
  function artio_parameter_set_string_array (line 505) | int artio_parameter_set_string_array(artio_fileset *handle, const char *...
  function artio_parameter_get_string (line 538) | int artio_parameter_get_string(artio_fileset *handle, const char *key, c...
  function artio_parameter_get_string_array_index (line 542) | int artio_parameter_get_string_array_index( artio_fileset *handle, const...
  function artio_parameter_get_string_array (line 569) | int artio_parameter_get_string_array(artio_fileset *handle, const char *...

FILE: yt/frontends/artio/artio_headers/artio_particle.c
  type __int64 (line 30) | typedef __int64 int64_t;
  type __int32 (line 31) | typedef __int32 int32_t;
  function artio_fileset_open_particles (line 43) | int artio_fileset_open_particles(artio_fileset *handle) {
  function artio_fileset_add_particles (line 143) | int artio_fileset_add_particles( artio_fileset *handle,
  function artio_particle_file (line 401) | artio_particle_file *artio_particle_file_allocate(void) {
  function artio_particle_file_destroy (line 428) | void artio_particle_file_destroy( artio_particle_file *phandle ) {
  function artio_fileset_close_particles (line 452) | int artio_fileset_close_particles(artio_fileset *handle) {
  function artio_particle_cache_sfc_range (line 466) | int artio_particle_cache_sfc_range(artio_fileset *handle,
  function artio_particle_clear_sfc_cache (line 542) | int artio_particle_clear_sfc_cache( artio_fileset *handle ) {
  function artio_particle_find_file (line 569) | int artio_particle_find_file(artio_particle_file *phandle,
  function artio_particle_seek_to_sfc (line 603) | int artio_particle_seek_to_sfc(artio_fileset *handle, int64_t sfc) {
  function artio_particle_write_root_cell_begin (line 640) | int artio_particle_write_root_cell_begin(artio_fileset *handle, int64_t ...
  function artio_particle_write_root_cell_end (line 680) | int artio_particle_write_root_cell_end(artio_fileset *handle) {
  function artio_particle_write_species_begin (line 700) | int artio_particle_write_species_begin(artio_fileset *handle,
  function artio_particle_write_species_end (line 730) | int artio_particle_write_species_end(artio_fileset *handle) {
  function artio_particle_write_particle (line 757) | int artio_particle_write_particle(artio_fileset *handle, int64_t pid, in...
  function artio_particle_read_root_cell_begin (line 803) | int artio_particle_read_root_cell_begin(artio_fileset *handle, int64_t sfc,
  function artio_particle_read_particle (line 839) | int artio_particle_read_particle(artio_fileset *handle, int64_t * pid, i...
  function artio_particle_read_species_begin (line 884) | int artio_particle_read_species_begin(artio_fileset *handle, int species) {
  function artio_particle_read_species_end (line 932) | int artio_particle_read_species_end(artio_fileset *handle) {
  function artio_particle_read_root_cell_end (line 957) | int artio_particle_read_root_cell_end(artio_fileset *handle) {
  function artio_particle_read_selection (line 976) | int artio_particle_read_selection(artio_fileset *handle,
  function artio_particle_read_selection_species (line 995) | int artio_particle_read_selection_species( artio_fileset *handle,
  function artio_particle_read_sfc_range (line 1022) | int artio_particle_read_sfc_range(artio_fileset *handle,
  function artio_particle_read_sfc_range_species (line 1041) | int artio_particle_read_sfc_range_species(artio_fileset *handle,

FILE: yt/frontends/artio/artio_headers/artio_posix.c
  type __int64 (line 33) | typedef __int64 int64_t;
  type __int32 (line 34) | typedef __int32 int32_t;
  type ARTIO_FH (line 39) | struct ARTIO_FH {
  function artio_fh (line 58) | artio_fh *artio_file_fopen_i( char * filename, int mode, const artio_con...
  function artio_file_attach_buffer_i (line 88) | int artio_file_attach_buffer_i( artio_fh *handle, void *buf, int buf_siz...
  function artio_file_detach_buffer_i (line 105) | int artio_file_detach_buffer_i( artio_fh *handle ) {
  function artio_file_fwrite_i (line 118) | int artio_file_fwrite_i(artio_fh *handle, const void *buf, int64_t count...
  function artio_file_fflush_i (line 181) | int artio_file_fflush_i(artio_fh *handle) {
  function artio_file_fread_i (line 204) | int artio_file_fread_i(artio_fh *handle, void *buf, int64_t count, int t...
  function artio_file_ftell_i (line 288) | int artio_file_ftell_i( artio_fh *handle, int64_t *offset ) {
  function artio_file_fseek_i (line 302) | int artio_file_fseek_i(artio_fh *handle, int64_t offset, int whence ) {
  function artio_file_fclose_i (line 357) | int artio_file_fclose_i(artio_fh *handle) {
  function artio_file_set_endian_swap_tag_i (line 367) | void artio_file_set_endian_swap_tag_i(artio_fh *handle) {

FILE: yt/frontends/artio/artio_headers/artio_selector.c
  type __int64 (line 30) | typedef __int64 int64_t;
  type __int32 (line 31) | typedef __int32 int32_t;
  function artio_selection_iterator (line 42) | int artio_selection_iterator( artio_selection *selection,
  function artio_selection_iterator_reset (line 72) | int artio_selection_iterator_reset( artio_selection *selection ) {
  function artio_selection_size (line 78) | int64_t artio_selection_size( artio_selection *selection ) {
  function artio_selection (line 87) | artio_selection *artio_selection_allocate( artio_fileset *handle ) {
  function artio_selection_destroy (line 104) | int artio_selection_destroy( artio_selection *selection ) {
  function artio_selection_add_range (line 116) | int artio_selection_add_range( artio_selection *selection,
  function artio_selection_add_root_cell (line 202) | int artio_selection_add_root_cell( artio_selection *selection, int coord...
  function artio_selection_print (line 220) | void artio_selection_print( artio_selection *selection ) {
  function artio_selection (line 228) | artio_selection *artio_select_all( artio_fileset *handle ) {
  function artio_selection (line 248) | artio_selection *artio_select_volume( artio_fileset *handle, double lpos...
  function artio_selection (line 291) | artio_selection *artio_select_cube( artio_fileset *handle, double center...

FILE: yt/frontends/artio/artio_headers/artio_sfc.c
  function artio_morton_index (line 36) | int64_t artio_morton_index( artio_fileset *handle, int coords[nDim] )
  function artio_hilbert_index (line 61) | int64_t artio_hilbert_index( artio_fileset *handle, int coords[nDim] )
  function artio_hilbert_coords (line 154) | void artio_hilbert_coords( artio_fileset *handle, int64_t index, int coo...
  function artio_slab_index (line 233) | int64_t artio_slab_index( artio_fileset *handle, int coords[nDim], int s...
  function artio_slab_coords (line 253) | void artio_slab_coords( artio_fileset *handle, int64_t index, int coords...
  function artio_sfc_index_position (line 274) | int64_t artio_sfc_index_position( artio_fileset *handle, double position...
  function artio_sfc_index (line 284) | int64_t artio_sfc_index( artio_fileset *handle, int coords[nDim] ) {
  function artio_sfc_coords (line 294) | void artio_sfc_coords( artio_fileset *handle, int64_t index, int coords[...

FILE: yt/frontends/artio/artio_headers/cosmology.c
  type CosmologyParametersStruct (line 35) | struct CosmologyParametersStruct
  function CosmologyParameters (line 67) | CosmologyParameters *cosmology_allocate() {
  function cosmology_free (line 78) | void cosmology_free(CosmologyParameters *c) {
  function cosmology_is_set (line 83) | int cosmology_is_set(CosmologyParameters *c)
  function cosmology_fail_on_reset (line 89) | void cosmology_fail_on_reset(const char *name, double old_value, double ...
  function cosmology_set_OmegaM (line 97) | void cosmology_set_OmegaM(CosmologyParameters *c, double v)
  function cosmology_set_OmegaL (line 110) | void cosmology_set_OmegaL(CosmologyParameters *c, double v)
  function cosmology_set_OmegaB (line 122) | void cosmology_set_OmegaB(CosmologyParameters *c, double v)
  function cosmology_set_h (line 134) | void cosmology_set_h(CosmologyParameters *c, double v)
  function cosmology_set_DeltaDC (line 145) | void cosmology_set_DeltaDC(CosmologyParameters *c, double v)
  function cosmology_init (line 156) | void cosmology_init(CosmologyParameters *c)
  function cosmology_set_fixed (line 188) | void cosmology_set_fixed(CosmologyParameters *c)
  function cosmology_mu (line 195) | double cosmology_mu(CosmologyParameters *c, double a)
  function cosmology_dc_factor (line 201) | double cosmology_dc_factor(CosmologyParameters *c, double dPlus)
  function cosmology_fill_table_integrate (line 208) | void cosmology_fill_table_integrate(CosmologyParameters *c, double a, do...
  function asinh (line 220) | double asinh(double x){
  function cosmology_fill_table_piece (line 225) | void cosmology_fill_table_piece(CosmologyParameters *c, int istart, int n)
  function cosmology_fill_table (line 300) | void cosmology_fill_table(CosmologyParameters *c, double amin, double amax)
  function cosmology_clear_table (line 400) | void cosmology_clear_table(CosmologyParameters *c)
  function cosmology_check_range (line 424) | void cosmology_check_range(CosmologyParameters *c, double a)
  function cosmology_set_thread_safe_range (line 442) | void cosmology_set_thread_safe_range(CosmologyParameters *c, double amin...
  function cosmology_get_value_from_table (line 449) | double cosmology_get_value_from_table(CosmologyParameters *c, double a, ...
  function cosmology_find_index (line 472) | int cosmology_find_index(CosmologyParameters *c, double v, double table[])

FILE: yt/frontends/artio/artio_headers/cosmology.h
  type CosmologyParameters (line 4) | typedef struct CosmologyParametersStruct CosmologyParameters;

FILE: yt/frontends/artio/data_structures.py
  class ARTIOOctreeSubset (line 24) | class ARTIOOctreeSubset(OctreeSubset):
    method __init__ (line 31) | def __init__(self, base_region, sfc_start, sfc_end, oct_handler, ds):
    method oct_handler (line 46) | def oct_handler(self):
    method min_ind (line 50) | def min_ind(self):
    method max_ind (line 54) | def max_ind(self):
    method fill (line 57) | def fill(self, fields, selector):
    method fill_particles (line 77) | def fill_particles(self, fields):
  class ARTIORootMeshSubset (line 104) | class ARTIORootMeshSubset(ARTIOOctreeSubset):
    method fill (line 110) | def fill(self, fields, selector):
    method deposit (line 123) | def deposit(self, positions, fields=None, method=None, kernel_name="cu...
  class ARTIOIndex (line 150) | class ARTIOIndex(Index):
    method __init__ (line 151) | def __init__(self, ds, dataset_type="artio"):
    method max_range (line 164) | def max_range(self):
    method _setup_geometry (line 167) | def _setup_geometry(self):
    method get_smallest_dx (line 170) | def get_smallest_dx(self):
    method _get_particle_type_counts (line 179) | def _get_particle_type_counts(self):
    method convert (line 190) | def convert(self, unit):
    method find_max (line 193) | def find_max(self, field, finest_levels=3):
    method find_max_cell_location (line 203) | def find_max_cell_location(self, field, finest_levels=3):
    method _detect_output_fields (line 214) | def _detect_output_fields(self):
    method _detect_fluid_fields (line 220) | def _detect_fluid_fields(self):
    method _detect_particle_fields (line 223) | def _detect_particle_fields(self):
    method _identify_base_chunk (line 232) | def _identify_base_chunk(self, dobj):
    method _data_size (line 299) | def _data_size(self, dobj, dobjs):
    method _chunk_all (line 305) | def _chunk_all(self, dobj):
    method _chunk_spatial (line 309) | def _chunk_spatial(self, dobj, ngz, preload_fields=None):
    method _chunk_io (line 320) | def _chunk_io(self, dobj, cache=True, local_only=False):
    method _read_fluid_fields (line 326) | def _read_fluid_fields(self, fields, dobj, chunk=None):
    method _icoords_to_fcoords (line 340) | def _icoords_to_fcoords(
  class ARTIODataset (line 358) | class ARTIODataset(Dataset):
    method __init__ (line 363) | def __init__(
    method _set_code_unit_attributes (line 392) | def _set_code_unit_attributes(self):
    method _parse_parameter_file (line 398) | def _parse_parameter_file(self):
    method create_field_info (line 504) | def create_field_info(self):
    method _is_valid (line 520) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:

FILE: yt/frontends/artio/definitions.py
  class ARTIOconstants (line 33) | class ARTIOconstants:
    method __init__ (line 34) | def __init__(self):

FILE: yt/frontends/artio/fields.py
  class ARTIOFieldInfo (line 18) | class ARTIOFieldInfo(FieldInfoContainer):
    method setup_fluid_fields (line 57) | def setup_fluid_fields(self):
    method setup_particle_fields (line 133) | def setup_particle_fields(self, ptype):

FILE: yt/frontends/artio/io.py
  class IOHandlerARTIO (line 6) | class IOHandlerARTIO(BaseIOHandler):
    method _read_fluid_selection (line 9) | def _read_fluid_selection(self, chunks, selector, fields):
    method _read_particle_coords (line 21) | def _read_particle_coords(self, chunks, ptf):
    method _read_particle_fields (line 35) | def _read_particle_fields(self, chunks, ptf, selector):

FILE: yt/frontends/artio/tests/test_outputs.py
  function test_sizmbhloz (line 30) | def test_sizmbhloz():
  function test_ARTIODataset (line 51) | def test_ARTIODataset():
  function test_units_override (line 56) | def test_units_override():
  function test_particle_derived_field (line 61) | def test_particle_derived_field():

FILE: yt/frontends/athena/data_structures.py
  function chk23 (line 21) | def chk23(strin):
  function str23 (line 25) | def str23(strin):
  function check_readline (line 32) | def check_readline(fl):
  function check_break (line 43) | def check_break(line):
  function _get_convert (line 52) | def _get_convert(fname):
  class AthenaGrid (line 59) | class AthenaGrid(AMRGridPatch):
    method __init__ (line 62) | def __init__(self, id, index, level, start, dimensions, file_offset, r...
    method _setup_dx (line 75) | def _setup_dx(self):
  function parse_line (line 91) | def parse_line(line, grid):
  class AthenaHierarchy (line 122) | class AthenaHierarchy(GridIndex):
    method __init__ (line 127) | def __init__(self, ds, dataset_type="athena"):
    method _detect_output_fields (line 138) | def _detect_output_fields(self):
    method _count_grids (line 202) | def _count_grids(self):
    method _parse_index (line 205) | def _parse_index(self):
    method _populate_grid_objects (line 423) | def _populate_grid_objects(self):
    method _reconstruct_parent_child (line 430) | def _reconstruct_parent_child(self):
    method _get_grid_children (line 451) | def _get_grid_children(self, grid):
    method _chunk_io (line 457) | def _chunk_io(self, dobj, cache=True, local_only=False):
  class AthenaDataset (line 465) | class AthenaDataset(Dataset):
    method __init__ (line 470) | def __init__(
    method _set_code_unit_attributes (line 507) | def _set_code_unit_attributes(self):
    method _parse_parameter_file (line 528) | def _parse_parameter_file(self):
    method _is_valid (line 635) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
    method _skip_cache (line 659) | def _skip_cache(self):
    method __str__ (line 662) | def __str__(self):

FILE: yt/frontends/athena/fields.py
  function velocity_field (line 11) | def velocity_field(comp):
  class AthenaFieldInfo (line 18) | class AthenaFieldInfo(FieldInfoContainer):
    method setup_fluid_fields (line 36) | def setup_fluid_fields(self):

FILE: yt/frontends/athena/io.py
  class IOHandlerAthena (line 13) | class IOHandlerAthena(BaseIOHandler):
    method _read_field_names (line 19) | def _read_field_names(self, grid):
    method _read_chunk_data (line 22) | def _read_chunk_data(self, chunk, fields):
    method _read_data_slice (line 75) | def _read_data_slice(self, grid, field, axis, coord):
    method _read_fluid_selection (line 82) | def _read_fluid_selection(self, chunks, selector, fields, size):
  function get_read_table_offset (line 109) | def get_read_table_offset(f):

FILE: yt/frontends/athena/tests/test_outputs.py
  function test_cloud (line 27) | def test_cloud():
  function test_blast (line 45) | def test_blast():
  function test_blast_override (line 61) | def test_blast_override():
  function test_stripping (line 84) | def test_stripping():
  function test_nprocs (line 103) | def test_nprocs():
  function test_AthenaDataset (line 131) | def test_AthenaDataset():
  function test_mag_factor (line 137) | def test_mag_factor():

FILE: yt/frontends/athena_pp/data_structures.py
  class AthenaPPGrid (line 30) | class AthenaPPGrid(AMRGridPatch):
    method __init__ (line 33) | def __init__(self, id, index, level):
    method _setup_dx (line 39) | def _setup_dx(self):
  class AthenaPPStretchedGrid (line 52) | class AthenaPPStretchedGrid(StretchedGrid):
    method __init__ (line 55) | def __init__(self, id, cell_widths, index, level):
  class AthenaPPHierarchy (line 62) | class AthenaPPHierarchy(GridIndex):
    method __init__ (line 66) | def __init__(self, ds, dataset_type="athena_pp"):
    method _detect_output_fields (line 76) | def _detect_output_fields(self):
    method _count_grids (line 79) | def _count_grids(self):
    method _parse_index (line 82) | def _parse_index(self):
    method _populate_grid_objects (line 121) | def _populate_grid_objects(self):
  class AthenaPPDataset (line 128) | class AthenaPPDataset(Dataset):
    method __init__ (line 133) | def __init__(
    method _set_code_unit_attributes (line 177) | def _set_code_unit_attributes(self):
    method _parse_parameter_file (line 204) | def _parse_parameter_file(self):
    method _is_valid (line 265) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
    method _skip_cache (line 269) | def _skip_cache(self):
    method __str__ (line 272) | def __str__(self):

FILE: yt/frontends/athena_pp/fields.py
  function velocity_field (line 11) | def velocity_field(j):
  class AthenaPPFieldInfo (line 18) | class AthenaPPFieldInfo(FieldInfoContainer):
    method setup_fluid_fields (line 27) | def setup_fluid_fields(self):

FILE: yt/frontends/athena_pp/io.py
  function grid_sequences (line 10) | def grid_sequences(grids):
  class IOHandlerAthenaPP (line 17) | class IOHandlerAthenaPP(BaseIOHandler):
    method __init__ (line 21) | def __init__(self, ds):
    method _read_particles (line 25) | def _read_particles(
    method _read_fluid_selection (line 30) | def _read_fluid_selection(self, chunks, selector, fields, size):
    method _read_chunk_data (line 63) | def _read_chunk_data(self, chunk, fields):

FILE: yt/frontends/athena_pp/tests/test_outputs.py
  function test_disk (line 26) | def test_disk():
  function test_AM06 (line 48) | def test_AM06():
  function test_AM06_override (line 64) | def test_AM06_override():
  function test_units_override (line 72) | def test_units_override():
  function test_AthenaPPDataset (line 77) | def test_AthenaPPDataset():
  function test_magnetic_units (line 82) | def test_magnetic_units():
  function test_mag_factor (line 90) | def test_mag_factor():

FILE: yt/frontends/boxlib/_deprecation.py
  function boxlib_deprecation (line 4) | def boxlib_deprecation():

FILE: yt/frontends/boxlib/tests/test_boxlib_deprecation.py
  function test_imports (line 6) | def test_imports():

FILE: yt/frontends/boxlib/tests/test_outputs.py
  function test_radadvect (line 48) | def test_radadvect():
  function test_radtube (line 60) | def test_radtube():
  function test_star (line 72) | def test_star():
  function test_LyA (line 84) | def test_LyA():
  function test_nyx_particle_io (line 95) | def test_nyx_particle_io():
  function test_RT_particles (line 144) | def test_RT_particles():
  function test_castro_particle_io (line 153) | def test_castro_particle_io():
  function test_langmuir (line 193) | def test_langmuir():
  function test_plasma (line 207) | def test_plasma():
  function test_beam (line 221) | def test_beam():
  function test_warpx_particle_io (line 237) | def test_warpx_particle_io():
  function test_raw_fields (line 294) | def test_raw_fields():
  function test_OrionDataset (line 300) | def test_OrionDataset():
  function test_NyxDataset (line 305) | def test_NyxDataset():
  function test_NyxDataset_2 (line 310) | def test_NyxDataset_2():
  function test_CastroDataset (line 315) | def test_CastroDataset():
  function test_CastroDataset_2 (line 320) | def test_CastroDataset_2():
  function test_CastroDataset_3 (line 325) | def test_CastroDataset_3():
  function test_WarpXDataset (line 330) | def test_WarpXDataset():
  function test_magnetic_units (line 336) | def test_magnetic_units():
  function test_WarpXDataset_2 (line 352) | def test_WarpXDataset_2():
  function test_AMReXDataset (line 357) | def test_AMReXDataset():
  function test_units_override (line 363) | def test_units_override():
  function test_nyx_no_part (line 371) | def test_nyx_no_part():
  function test_maestro_parameters (line 421) | def test_maestro_parameters():
  function test_castro_parameters (line 452) | def test_castro_parameters():

FILE: yt/frontends/cf_radial/data_structures.py
  class CFRadialGrid (line 25) | class CFRadialGrid(AMRGridPatch):
    method __init__ (line 28) | def __init__(self, id, index, level, dimensions):
  class CFRadialHierarchy (line 36) | class CFRadialHierarchy(GridIndex):
    method __init__ (line 39) | def __init__(self, ds, dataset_type="cf_radial"):
    method _detect_output_fields (line 49) | def _detect_output_fields(self):
    method _count_grids (line 63) | def _count_grids(self):
    method _parse_index (line 66) | def _parse_index(self):
    method _populate_grid_objects (line 74) | def _populate_grid_objects(self):
  class CFRadialDataset (line 82) | class CFRadialDataset(Dataset):
    method __init__ (line 87) | def __init__(
    method _handle (line 197) | def _handle(self, filename: str | None = None):
    method _validate_grid_dim (line 207) | def _validate_grid_dim(
    method _validate_grid_shape (line 237) | def _validate_grid_shape(
    method _round_grid_guess (line 252) | def _round_grid_guess(self, bounds: tuple[float, float], unit_str: str):
    method _set_code_unit_attributes (line 262) | def _set_code_unit_attributes(self):
    method _parse_parameter_file (line 269) | def _parse_parameter_file(self):
    method _is_valid (line 298) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:

FILE: yt/frontends/cf_radial/fields.py
  class CFRadialFieldInfo (line 11) | class CFRadialFieldInfo(FieldInfoContainer):
    method setup_fluid_fields (line 20) | def setup_fluid_fields(self):

FILE: yt/frontends/cf_radial/io.py
  class CFRadialIOHandler (line 13) | class CFRadialIOHandler(BaseIOHandler):
    method _read_fluid_selection (line 17) | def _read_fluid_selection(self, chunks, selector, fields, size):

FILE: yt/frontends/cf_radial/tests/test_cf_radial_pytest.py
  function create_cf_radial_mock_gridded_ds (line 10) | def create_cf_radial_mock_gridded_ds(savedir: Path) -> Path:
  function test_load_mock_gridded_cf_radial (line 37) | def test_load_mock_gridded_cf_radial(tmp_path):

FILE: yt/frontends/cf_radial/tests/test_outputs.py
  function test_units_override (line 44) | def test_units_override():
  function test_cf_radial_gridded (line 50) | def test_cf_radial_gridded():
  function check_fields (line 63) | def check_fields(ds, field):
  function check_field_units (line 69) | def check_field_units(ad, field, value):
  function check_origin_latitude_longitude (line 73) | def check_origin_latitude_longitude(ds):
  function check_domain (line 78) | def check_domain(ds):
  function test_auto_gridding (line 94) | def test_auto_gridding():
  function test_grid_parameters (line 128) | def test_grid_parameters():
  function test_cfradial_grid_field_values (line 177) | def test_cfradial_grid_field_values():

FILE: yt/frontends/chimera/data_structures.py
  class ChimeraMesh (line 26) | class ChimeraMesh(SemiStructuredMesh):
    method __init__ (line 29) | def __init__(self, *args, **kwargs):
  function _find_files (line 33) | def _find_files(filename_c):
  class ChimeraUNSIndex (line 47) | class ChimeraUNSIndex(UnstructuredIndex):
    method __init__ (line 48) | def __init__(self, ds, dataset_type="chimera"):
    method _initialize_mesh (line 54) | def _initialize_mesh(self):
    method _detect_output_fields (line 156) | def _detect_output_fields(self):  # Reads in the available data fields
    method _chunk_io (line 186) | def _chunk_io(self, dobj, cache=True, local_only=False):  # Creates Da...
    method _setup_data_io (line 193) | def _setup_data_io(self):
  class ChimeraDataset (line 197) | class ChimeraDataset(Dataset):
    method __init__ (line 202) | def __init__(
    method _set_code_unit_attributes (line 217) | def _set_code_unit_attributes(self):
    method _parse_parameter_file (line 230) | def _parse_parameter_file(self):
    method _is_valid (line 271) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:

FILE: yt/frontends/chimera/fields.py
  class ChimeraFieldInfo (line 16) | class ChimeraFieldInfo(FieldInfoContainer):
    method __init__ (line 48) | def __init__(self, ds, field_list):
    method setup_fluid_fields (line 52) | def setup_fluid_fields(self):
    method setup_particle_fields (line 64) | def setup_particle_fields(self, ptype):

FILE: yt/frontends/chimera/io.py
  class ChimeraIOHandler (line 17) | class ChimeraIOHandler(BaseIOHandler):
    method __init__ (line 21) | def __init__(self, ds):
    method _read_particle_coords (line 26) | def _read_particle_coords(self, chunks, ptf):
    method _read_particle_fields (line 32) | def _read_particle_fields(self, chunks, ptf, selector):
    method _read_fluid_selection (line 40) | def _read_fluid_selection(self, chunks, selector, fields, size):
    method io_iter (line 60) | def io_iter(self, chunks, fields):
    method _read_chunk_data (line 212) | def _read_chunk_data(self, chunk, fields):

FILE: yt/frontends/chimera/tests/test_outputs.py
  function test_2D (line 21) | def test_2D():
  function test_3D (line 107) | def test_3D():
  function test_multimesh (line 188) | def test_multimesh():  # Tests that the multimesh system for 3D data has...

FILE: yt/frontends/cholla/data_structures.py
  class ChollaGrid (line 17) | class ChollaGrid(AMRGridPatch):
    method __init__ (line 20) | def __init__(self, id, index, level, dims):
  class ChollaHierarchy (line 28) | class ChollaHierarchy(GridIndex):
    method __init__ (line 31) | def __init__(self, ds, dataset_type="cholla"):
    method _detect_output_fields (line 41) | def _detect_output_fields(self):
    method _count_grids (line 45) | def _count_grids(self):
    method _parse_index (line 48) | def _parse_index(self):
    method _populate_grid_objects (line 56) | def _populate_grid_objects(self):
  class ChollaDataset (line 65) | class ChollaDataset(Dataset):
    method __init__ (line 70) | def __init__(
    method _set_code_unit_attributes (line 82) | def _set_code_unit_attributes(self):
    method _parse_parameter_file (line 102) | def _parse_parameter_file(self):
    method _is_valid (line 163) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:

FILE: yt/frontends/cholla/fields.py
  function velocity_field (line 15) | def velocity_field(comp):
  class ChollaFieldInfo (line 22) | class ChollaFieldInfo(FieldInfoContainer):
    method setup_fluid_fields (line 39) | def setup_fluid_fields(self):
    method setup_particle_fields (line 152) | def setup_particle_fields(self, ptype):

FILE: yt/frontends/cholla/io.py
  class ChollaIOHandler (line 7) | class ChollaIOHandler(BaseIOHandler):
    method _read_particle_coords (line 11) | def _read_particle_coords(self, chunks, ptf):
    method _read_particle_fields (line 14) | def _read_particle_fields(self, chunks, ptf, selector):
    method _read_fluid_selection (line 17) | def _read_fluid_selection(self, chunks, selector, fields, size):
    method _read_chunk_data (line 34) | def _read_chunk_data(self, chunk, fields):

FILE: yt/frontends/cholla/tests/test_outputs.py
  function test_ChollaDataset (line 22) | def test_ChollaDataset():
  function test_ChollaSimple_fields (line 28) | def test_ChollaSimple_fields():
  function test_ChollaSimple_derived_fields (line 53) | def test_ChollaSimple_derived_fields():
  function test_cholla_data (line 83) | def test_cholla_data():

FILE: yt/frontends/chombo/data_structures.py
  function is_chombo_hdf5 (line 28) | def is_chombo_hdf5(fn):
  class ChomboGrid (line 37) | class ChomboGrid(AMRGridPatch):
    method __init__ (line 41) | def __init__(self, id, index, level, start, stop):
    method get_global_startindex (line 48) | def get_global_startindex(self):
    method _setup_dx (line 67) | def _setup_dx(self):
    method Parent (line 72) | def Parent(self):
    method Children (line 78) | def Children(self):
  class ChomboHierarchy (line 82) | class ChomboHierarchy(GridIndex):
    method __init__ (line 86) | def __init__(self, ds, dataset_type="chombo_hdf5"):
    method _read_particles (line 103) | def _read_particles(self):
    method _detect_output_fields (line 127) | def _detect_output_fields(self):
    method _count_grids (line 142) | def _count_grids(self):
    method _parse_index (line 153) | def _parse_index(self):
    method _populate_grid_objects (line 206) | def _populate_grid_objects(self):
    method _setup_derived_fields (line 212) | def _setup_derived_fields(self):
    method _reconstruct_parent_child (line 215) | def _reconstruct_parent_child(self):
  class ChomboDataset (line 236) | class ChomboDataset(Dataset):
    method __init__ (line 241) | def __init__(
    method _set_code_unit_attributes (line 274) | def _set_code_unit_attributes(self):
    method _localize (line 287) | def _localize(self, f, default):
    method _parse_parameter_file (line 292) | def _parse_parameter_file(self):
    method _determine_current_time (line 315) | def _determine_current_time(self):
    method _determine_periodic (line 328) | def _determine_periodic(self):
    method _calc_left_edge (line 338) | def _calc_left_edge(self):
    method _calc_right_edge (line 345) | def _calc_right_edge(self):
    method _calc_domain_dimensions (line 352) | def _calc_domain_dimensions(self):
    method _is_valid (line 360) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
    method print_key_parameters (line 391) | def print_key_parameters(self):
  class PlutoHierarchy (line 405) | class PlutoHierarchy(ChomboHierarchy):
    method __init__ (line 406) | def __init__(self, ds, dataset_type="chombo_hdf5"):
    method _parse_index (line 409) | def _parse_index(self):
  class PlutoDataset (line 465) | class PlutoDataset(ChomboDataset):
    method __init__ (line 469) | def __init__(
    method _parse_parameter_file (line 490) | def _parse_parameter_file(self):
    method _is_valid (line 555) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
  class Orion2Hierarchy (line 575) | class Orion2Hierarchy(ChomboHierarchy):
    method __init__ (line 576) | def __init__(self, ds, dataset_type="orion_chombo_native"):
    method _detect_output_fields (line 579) | def _detect_output_fields(self):
    method _read_particles (line 594) | def _read_particles(self):
  class Orion2Dataset (line 637) | class Orion2Dataset(ChomboDataset):
    method __init__ (line 642) | def __init__(
    method _parse_parameter_file (line 661) | def _parse_parameter_file(self):
    method _parse_inputs_file (line 683) | def _parse_inputs_file(self, ini_filename):
    method _is_valid (line 716) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
  class ChomboPICHierarchy (line 751) | class ChomboPICHierarchy(ChomboHierarchy):
    method __init__ (line 752) | def __init__(self, ds, dataset_type="chombo_hdf5"):
  class ChomboPICDataset (line 756) | class ChomboPICDataset(ChomboDataset):
    method __init__ (line 761) | def __init__(
    method _is_valid (line 785) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:

FILE: yt/frontends/chombo/fields.py
  class ChomboFieldInfo (line 20) | class ChomboFieldInfo(FieldInfoContainer):
  class Orion2FieldInfo (line 28) | class Orion2FieldInfo(ChomboFieldInfo):
    method setup_particle_fields (line 67) | def setup_particle_fields(self, ptype):
    method setup_fluid_fields (line 87) | def setup_fluid_fields(self):
  class ChomboPICFieldInfo3D (line 195) | class ChomboPICFieldInfo3D(FieldInfoContainer):
    method setup_particle_fields (line 219) | def setup_particle_fields(self, ptype, ftype="gas", num_neighbors=64):
  function _dummy_position (line 265) | def _dummy_position(data):
  function _dummy_velocity (line 269) | def _dummy_velocity(data):
  function _dummy_field (line 273) | def _dummy_field(data):
  class ChomboPICFieldInfo2D (line 281) | class ChomboPICFieldInfo2D(ChomboPICFieldInfo3D):
    method __init__ (line 299) | def __init__(self, ds, field_list):
  class ChomboPICFieldInfo1D (line 326) | class ChomboPICFieldInfo1D(ChomboPICFieldInfo3D):
    method __init__ (line 341) | def __init__(self, ds, field_list):
  class PlutoFieldInfo (line 386) | class PlutoFieldInfo(ChomboFieldInfo):
    method setup_fluid_fields (line 400) | def setup_fluid_fields(self):

FILE: yt/frontends/chombo/io.py
  class IOHandlerChomboHDF5 (line 10) | class IOHandlerChomboHDF5(BaseIOHandler):
    method __init__ (line 16) | def __init__(self, ds, *args, **kwargs):
    method _calculate_offsets (line 25) | def _calculate_offsets(self):
    method _read_ghost_info (line 47) | def _read_ghost_info(self):
    method field_dict (line 62) | def field_dict(self):
    method particle_field_index (line 76) | def particle_field_index(self):
    method _read_data (line 89) | def _read_data(self, grid, field):
    method _read_fluid_selection (line 110) | def _read_fluid_selection(self, chunks, selector, fields, size):
    method _read_particle_selection (line 146) | def _read_particle_selection(self, chunks, selector, fields):
    method _read_particles (line 169) | def _read_particles(self, grid, name):
  function parse_orion_sinks (line 198) | def parse_orion_sinks(fn):
  class IOHandlerOrion2HDF5 (line 262) | class IOHandlerOrion2HDF5(IOHandlerChomboHDF5):
    method particle_field_index (line 268) | def particle_field_index(self):
    method _read_particles (line 276) | def _read_particles(self, grid, field):

FILE: yt/frontends/chombo/tests/test_outputs.py
  function test_gc (line 21) | def test_gc():
  function test_tb (line 34) | def test_tb():
  function test_iso (line 47) | def test_iso():
  function test_zp (line 61) | def test_zp():
  function test_kho (line 74) | def test_kho():
  function test_ChomboDataset (line 84) | def test_ChomboDataset():
  function test_Orion2Dataset (line 90) | def test_Orion2Dataset():
  function test_PlutoDataset (line 96) | def test_PlutoDataset():
  function test_units_override_zp (line 102) | def test_units_override_zp():
  function test_units_override_gc (line 108) | def test_units_override_gc():
  function test_units_override_kho (line 114) | def test_units_override_kho():

FILE: yt/frontends/eagle/data_structures.py
  class EagleDataset (line 12) | class EagleDataset(GadgetHDF5Dataset):
    method _parse_parameter_file (line 18) | def _parse_parameter_file(self):
    method _set_code_unit_attributes (line 36) | def _set_code_unit_attributes(self):
    method _is_valid (line 40) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
  class EagleNetworkDataset (line 74) | class EagleNetworkDataset(EagleDataset):
    method _is_valid (line 81) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:

FILE: yt/frontends/eagle/fields.py
  class EagleNetworkFieldInfo (line 7) | class EagleNetworkFieldInfo(OWLSFieldInfo):
    method __init__ (line 129) | def __init__(self, ds, field_list, slice_info=None):
    method _create_ion_density_func (line 132) | def _create_ion_density_func(self, ftype, ion):

FILE: yt/frontends/eagle/io.py
  class IOHandlerEagleNetwork (line 4) | class IOHandlerEagleNetwork(IOHandlerOWLS):

FILE: yt/frontends/eagle/tests/test_outputs.py
  function test_EagleDataset (line 10) | def test_EagleDataset():
  function test_Snipshot (line 22) | def test_Snipshot():

FILE: yt/frontends/enzo/answer_testing_support.py
  class AssertWrapper (line 19) | class AssertWrapper:
    method __init__ (line 25) | def __init__(self, description, *args):
    method __call__ (line 31) | def __call__(self):
  function requires_outputlog (line 35) | def requires_outputlog(path=".", prefix=""):
  function standard_small_simulation (line 64) | def standard_small_simulation(ds_fn, fields):
  class ShockTubeTest (line 84) | class ShockTubeTest:
    method __init__ (line 85) | def __init__(
    method __call__ (line 96) | def __call__(self):
    method get_analytical_solution (line 119) | def get_analytical_solution(self):

FILE: yt/frontends/enzo/data_structures.py
  class EnzoGrid (line 25) | class EnzoGrid(AMRGridPatch):
    method __init__ (line 30) | def __init__(self, id, index):
    method set_filename (line 41) | def set_filename(self, filename):
    method Parent (line 59) | def Parent(self):
    method Children (line 65) | def Children(self):
    method NumberOfActiveParticles (line 69) | def NumberOfActiveParticles(self):
  class EnzoGridInMemory (line 80) | class EnzoGridInMemory(EnzoGrid):
    method set_filename (line 83) | def set_filename(self, filename):
  class EnzoGridGZ (line 87) | class EnzoGridGZ(EnzoGrid):
    method retrieve_ghost_zones (line 90) | def retrieve_ghost_zones(self, n_zones, fields, all_levels=False, smoo...
  class EnzoHierarchy (line 142) | class EnzoHierarchy(GridIndex):
    method __init__ (line 147) | def __init__(self, ds, dataset_type):
    method _count_grids (line 164) | def _count_grids(self):
    method _guess_dataset_type (line 185) | def _guess_dataset_type(self, rank, test_grid, test_grid_id):
    method _parse_index (line 211) | def _parse_index(self):
    method _initialize_grid_arrays (line 282) | def _initialize_grid_arrays(self):
    method _fill_arrays (line 293) | def _fill_arrays(self, ei, si, LE, RE, npart, nap):
    method __pointer_handler (line 304) | def __pointer_handler(self, m):
    method _rebuild_top_grids (line 325) | def _rebuild_top_grids(self, level=0):
    method _populate_grid_objects (line 344) | def _populate_grid_objects(self):
    method _detect_active_particle_fields (line 352) | def _detect_active_particle_fields(self):
    method _setup_derived_fields (line 388) | def _setup_derived_fields(self):
    method _detect_output_fields (line 403) | def _detect_output_fields(self):
    method _generate_random_grids (line 442) | def _generate_random_grids(self):
    method _get_particle_type_counts (line 463) | def _get_particle_type_counts(self):
    method find_particles_by_type (line 472) | def find_particles_by_type(self, ptype, max_num=None, additional_field...
  class EnzoHierarchyInMemory (line 534) | class EnzoHierarchyInMemory(EnzoHierarchy):
    method enzo (line 538) | def enzo(self):
    method __init__ (line 543) | def __init__(self, ds, dataset_type=None):
    method _initialize_data_storage (line 551) | def _initialize_data_storage(self):
    method _count_grids (line 554) | def _count_grids(self):
    method _parse_index (line 557) | def _parse_index(self):
    method _initialize_grid_arrays (line 585) | def _initialize_grid_arrays(self):
    method _copy_index_structure (line 589) | def _copy_index_structure(self):
    method save_data (line 602) | def save_data(self, *args, **kwargs):
    method _generate_random_grids (line 608) | def _generate_random_grids(self):
    method _chunk_io (line 620) | def _chunk_io(self, dobj, cache=True, local_only=False):
  class EnzoHierarchy1D (line 634) | class EnzoHierarchy1D(EnzoHierarchy):
    method _fill_arrays (line 635) | def _fill_arrays(self, ei, si, LE, RE, npart, nap):
  class EnzoHierarchy2D (line 649) | class EnzoHierarchy2D(EnzoHierarchy):
    method _fill_arrays (line 650) | def _fill_arrays(self, ei, si, LE, RE, npart, nap):
  class EnzoDataset (line 664) | class EnzoDataset(Dataset):
    method __init__ (line 673) | def __init__(
    method _setup_1d (line 712) | def _setup_1d(self):
    method _setup_2d (line 717) | def _setup_2d(self):
    method get_parameter (line 722) | def get_parameter(self, parameter, type=None):
    method unique_identifier (line 755) | def unique_identifier(self) -> str:
    method _parse_parameter_file (line 770) | def _parse_parameter_file(self):
    method _parse_enzo3_parameter_file (line 784) | def _parse_enzo3_parameter_file(self, f):
    method _parse_enzo2_parameter_file (line 828) | def _parse_enzo2_parameter_file(self, f):
    method _set_code_unit_attributes (line 941) | def _set_code_unit_attributes(self):
    method _is_valid (line 986) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
    method _guess_candidates (line 992) | def _guess_candidates(cls, base, directories, files):
  class EnzoDatasetInMemory (line 1003) | class EnzoDatasetInMemory(EnzoDataset):
    method __init__ (line 1007) | def __init__(self, parameter_override=None, conversion_override=None):
    method _parse_parameter_file (line 1018) | def _parse_parameter_file(self):
    method _obtain_enzo (line 1060) | def _obtain_enzo(self):
    method _is_valid (line 1066) | def _is_valid(cls, filename: str, *args, **kwargs) -> bool:
  function rblocks (line 1075) | def rblocks(f, blocksize=4096):
  function rlines (line 1098) | def rlines(f, keepends=False):

FILE: yt/frontends/enzo/fields.py
  class EnzoFieldInfo (line 51) | class EnzoFieldInfo(FieldInfoContainer):
    method __init__ (line 116) | def __init__(self, ds, field_list):
    method add_species_field (line 137) | def add_species_field(self, species):
    method setup_species_fields (line 157) | def setup_species_fields(self):
    method setup_fluid_fields (line 179) | def setup_fluid_fields(self):
    method setup_energy_field (line 193) | def setup_energy_field(self):
    method setup_particle_fields (line 323) | def setup_particle_fields(self, ptype):

FILE: yt/frontends/enzo/io.py
  class IOHandlerPackedHDF5 (line 13) | class IOHandlerPackedHDF5(BaseIOHandler):
    method _read_field_names (line 18) | def _read_field_names(self, grid):
    method _read_exception (line 59) | def _read_exception(self):
    method _r

[
  {
    "path": ".codecov.yml",
    "chars": 192,
    "preview": "comment: false\n\ncoverage:\n  status:\n    project:\n      default:\n        threshold: 1%\n    patch:\n      default:\n        "
  },
  {
    "path": ".coveragerc",
    "chars": 241,
    "preview": "[run]\nplugins = Cython.Coverage\nbranch = True\n\n[report]\nomit=*.yml\n     */api.py\n\t */__init__.py\n\t */__config__.py\n\t */t"
  },
  {
    "path": ".git-blame-ignore-revs",
    "chars": 1613,
    "preview": "# transition to isort\n7edfcee093cca277307aabdb180e0ffc69768291\n81418e459f16c48d6b7a75d6ef8035dfe9651b39\n60f670d75a23a6d0"
  },
  {
    "path": ".github/CODEOWNERS",
    "chars": 1094,
    "preview": "# Auto request reviews from specific users or teams matching patterns\n#\n# - the yt-project retains ownership of any code"
  },
  {
    "path": ".github/ISSUE_TEMPLATE.md",
    "chars": 1591,
    "preview": "<!--To help us understand and resolve your issue, please fill out the form to\nthe best of your ability.-->\n<!--You can f"
  },
  {
    "path": ".github/PULL_REQUEST_TEMPLATE.md",
    "chars": 1320,
    "preview": "<!--Thank you so much for your PR! To help us review, fill out the form\nto the best of your ability.  Please make use of"
  },
  {
    "path": ".github/config.yml",
    "chars": 1126,
    "preview": "# Configuration for new-issue-welcome - https://github.com/behaviorbot/new-issue-welcome\n\n# Comment to be posted to on f"
  },
  {
    "path": ".github/dependabot.yml",
    "chars": 524,
    "preview": "version: 2\nupdates:\n- package-ecosystem: github-actions\n  directory: /.github/workflows\n  labels:\n    - dependencies\n   "
  },
  {
    "path": ".github/mergeable.yml",
    "chars": 501,
    "preview": "# config file for mergeable: https://github.com/mergeability/mergeable\nversion: 2\nmergeable:\n  - when: pull_request.*\n  "
  },
  {
    "path": ".github/workflows/bleeding-edge.yaml",
    "chars": 3100,
    "preview": "name: CI (bleeding edge)\n# this workflow is heavily inspired from pandas, see\n# https://github.com/pandas-dev/pandas/blo"
  },
  {
    "path": ".github/workflows/build-test.yaml",
    "chars": 6749,
    "preview": "name: Build and Test\n\non:\n  push:\n    branches:\n      - main\n  pull_request:\n  workflow_dispatch:\n\ndefaults:\n  run:\n    "
  },
  {
    "path": ".github/workflows/type-checking.yaml",
    "chars": 1105,
    "preview": "name: type checking\n\non:\n  push:\n    branches:\n      - main\n  pull_request:\n    paths:\n      - yt/**/*.py\n      - pyproj"
  },
  {
    "path": ".github/workflows/wheels.yaml",
    "chars": 5142,
    "preview": "name: Build CI Wheels\n\non:\n  push:\n    branches:\n      - main\n      - stable\n    tags:\n      - 'yt-*'\n  pull_request:\n  "
  },
  {
    "path": ".gitignore",
    "chars": 3477,
    "preview": "build\nyt.egg-info\n__config__.py\nfreetype.cfg\nhdf5.cfg\npng.cfg\nrockstar.cfg\nyt_updater.log\nyt/frontends/artio/_artio_call"
  },
  {
    "path": ".gitmodules",
    "chars": 249,
    "preview": "[submodule \"answer-store\"]\n\tpath = answer-store\n\turl = https://github.com/yt-project/answer-store\n\tbranch = yt-4.0\n[subm"
  },
  {
    "path": ".hgchurn",
    "chars": 2400,
    "preview": "stephenskory@yahoo.com = s@skory.us\n\"Stephen Skory stephenskory@yahoo.com\" = s@skory.us\nbear0980@gmail.com = yuan@astro."
  },
  {
    "path": ".hgtags",
    "chars": 256991,
    "preview": "008b15bd5122e910e321316fae6122da9a46e10f svn.1636\n009bca8c4c596f01526bc8159c90786e7c011d67 svn.347\n00d699ef358745ba38f43"
  },
  {
    "path": ".mailmap",
    "chars": 12920,
    "preview": "Stephen Skory <s@skory.us> Stephen Skory <stephenskory@yahoo.com>\nStephen Skory <s@skory.us> \"Stephen Skory stephenskory"
  },
  {
    "path": ".pre-commit-config.yaml",
    "chars": 1420,
    "preview": "# pre-commit 1.1.0 is required for `exclude`\n# however `minimum_pre_commit_version` itself requires 1.15.0\nminimum_pre_c"
  },
  {
    "path": ".tours/particle-indexing.tour",
    "chars": 9442,
    "preview": "{\n  \"$schema\": \"https://aka.ms/codetour-schema\",\n  \"title\": \"particle indexing\",\n  \"steps\": [\n    {\n      \"title\": \"Intr"
  },
  {
    "path": "CITATION",
    "chars": 1965,
    "preview": "To cite yt in publications, please use:\n\nTurk, M. J., Smith, B. D., Oishi, J. S., et al. 2011, ApJS, 192, 9\n\nIn the body"
  },
  {
    "path": "CONTRIBUTING.rst",
    "chars": 36486,
    "preview": ".. This document is rendered in HTML with cross-reference links filled in at\n   https://yt-project.org/doc/developing/de"
  },
  {
    "path": "COPYING.txt",
    "chars": 3496,
    "preview": "===============================\n The yt project licensing terms\n===============================\n\nyt is licensed under th"
  },
  {
    "path": "CREDITS",
    "chars": 6955,
    "preview": "yt is a group effort.\n\nContributors:\n                Tom Abel (tabel@slac.stanford.edu)\n                Gabriel Altay (g"
  },
  {
    "path": "MANIFEST.in",
    "chars": 3418,
    "preview": "include README* CREDITS CITATION  setupext.py CONTRIBUTING.rst\ninclude yt/visualization/mapserver/html/map.js\ninclude yt"
  },
  {
    "path": "README.md",
    "chars": 7339,
    "preview": "# The yt Project\n\n[![PyPI](https://img.shields.io/pypi/v/yt)](https://pypi.org/project/yt)\n[![Supported Python Versions]"
  },
  {
    "path": "clean.sh",
    "chars": 42,
    "preview": "#!/usr/bin/env bash\ngit clean -f -d -x yt\n"
  },
  {
    "path": "conftest.py",
    "chars": 16914,
    "preview": "import os\nimport shutil\nimport sys\nimport tempfile\nfrom importlib.metadata import version\nfrom importlib.util import fin"
  },
  {
    "path": "doc/Makefile",
    "chars": 5159,
    "preview": "# Makefile for Sphinx documentation\n#\n\n# You can set these variables from the command line.\nSPHINXOPTS    =\nSPHINXBUILD "
  },
  {
    "path": "doc/README",
    "chars": 368,
    "preview": "This directory contains the uncompiled yt documentation.  It's written to be\nused with Sphinx, a tool designed for writi"
  },
  {
    "path": "doc/activate",
    "chars": 3018,
    "preview": "### Adapted from virtualenv's activate script\n\n# This file must be used with \"source bin/activate\" *from bash*\n# you can"
  },
  {
    "path": "doc/activate.csh",
    "chars": 1964,
    "preview": "# This file must be used with \"source bin/activate.csh\" *from csh*.\n# You cannot run it directly.\n# Created by Davide Di"
  },
  {
    "path": "doc/cheatsheet.tex",
    "chars": 19718,
    "preview": "\\documentclass[10pt,landscape]{article}\n\\usepackage{multicol}\n\\usepackage{calc}\n\\usepackage{ifthen}\n\\usepackage[landscap"
  },
  {
    "path": "doc/docstring_idioms.txt",
    "chars": 1687,
    "preview": "Idioms for Docstrings in yt\n===========================\n\nFor a full list of recognized constructs for marking up docstri"
  },
  {
    "path": "doc/extensions/README",
    "chars": 153,
    "preview": "This includes a version of the Numpy Documentation extension that has been\nslightly modified to emit extra TOC tree item"
  },
  {
    "path": "doc/extensions/config_help.py",
    "chars": 1045,
    "preview": "import re\nimport subprocess\n\nfrom docutils import statemachine\nfrom docutils.parsers.rst import Directive\n\n\ndef setup(ap"
  },
  {
    "path": "doc/extensions/pythonscript_sphinxext.py",
    "chars": 2769,
    "preview": "import errno\nimport glob\nimport os\nimport shutil\nimport subprocess\nimport tempfile\nimport time\nimport uuid\n\nfrom docutil"
  },
  {
    "path": "doc/extensions/yt_colormaps.py",
    "chars": 2045,
    "preview": "# This extension is quite simple:\n#  1. It accepts a script name\n#  2. This script is added to the document in a literal"
  },
  {
    "path": "doc/extensions/yt_cookbook.py",
    "chars": 2879,
    "preview": "# This extension is quite simple:\n#  1. It accepts a script name\n#  2. This script is added to the document in a literal"
  },
  {
    "path": "doc/extensions/yt_showfields.py",
    "chars": 825,
    "preview": "import subprocess\nimport sys\n\nfrom docutils.parsers.rst import Directive\n\n\ndef setup(app):\n    app.add_directive(\"yt_sho"
  },
  {
    "path": "doc/helper_scripts/code_support.py",
    "chars": 2610,
    "preview": "vals = [\n    \"FluidQuantities\",\n    \"Particles\",\n    \"Parameters\",\n    \"Units\",\n    \"ReadOnDemand\",\n    \"LoadRawData\",\n "
  },
  {
    "path": "doc/helper_scripts/parse_cb_list.py",
    "chars": 1381,
    "preview": "import inspect\nfrom textwrap import TextWrapper\n\nimport yt\n\nds = yt.load(\"RD0005-mine/RedshiftOutput0005\")\n\noutput = ope"
  },
  {
    "path": "doc/helper_scripts/parse_dq_list.py",
    "chars": 1043,
    "preview": "import inspect\nfrom textwrap import TextWrapper\n\nimport yt\n\nds = yt.load(\"RD0005-mine/RedshiftOutput0005\")\n\noutput = ope"
  },
  {
    "path": "doc/helper_scripts/parse_object_list.py",
    "chars": 1062,
    "preview": "import inspect\nfrom textwrap import TextWrapper\n\nimport yt\n\nds = yt.load(\"RD0005-mine/RedshiftOutput0005\")\n\noutput = ope"
  },
  {
    "path": "doc/helper_scripts/run_recipes.py",
    "chars": 2481,
    "preview": "#!/usr/bin/env python3\n\nimport glob\nimport os\nimport shutil\nimport subprocess\nimport sys\nimport tempfile\nimport tracebac"
  },
  {
    "path": "doc/helper_scripts/show_fields.py",
    "chars": 10132,
    "preview": "import inspect\n\nimport numpy as np\n\nimport yt.frontends as frontends_module\nfrom yt.config import ytcfg\nfrom yt.fields.d"
  },
  {
    "path": "doc/helper_scripts/split_auto.py",
    "chars": 1784,
    "preview": "import collections\n\ntemplates = dict(\n    autoclass=r\"\"\"\n%(name)s\n%(header)s\n\n.. autoclass:: %(name)s\n   :members:\n   :i"
  },
  {
    "path": "doc/helper_scripts/table.py",
    "chars": 3280,
    "preview": "contents = [\n    (\n        \"Getting Started\",\n        [\n            (\"welcome/index.html\", \"Welcome to yt!\", \"What's yt "
  },
  {
    "path": "doc/source/_static/custom.css",
    "chars": 1898,
    "preview": "blockquote {\n    font-size: 16px;\n    border-left: none;\n}\n\ndd {\n    margin-left: 30px;\n}\n\n/*\n\nCollapse the navbar when "
  },
  {
    "path": "doc/source/_templates/autosummary/class.rst",
    "chars": 392,
    "preview": "{% extends \"!autosummary/class.rst\" %}\n\n{% block methods %}\n{% if methods %}\n.. autosummary::\n   :toctree:\n   {% for ite"
  },
  {
    "path": "doc/source/_templates/layout.html",
    "chars": 1627,
    "preview": "{% extends '!layout.html' %}\n\n{%- block linktags %}\n    <link href=\"https://yt-project.org/doc/{{ pagename }}.html\" rel="
  },
  {
    "path": "doc/source/about/index.rst",
    "chars": 3454,
    "preview": ".. _aboutyt:\n\nAbout yt\n========\n\n.. contents::\n   :depth: 1\n   :local:\n   :backlinks: none\n\nWhat is yt?\n-----------\n\nyt "
  },
  {
    "path": "doc/source/analyzing/Particle_Trajectories.ipynb",
    "chars": 12700,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Particle Trajectories\"\n   ]\n  },\n"
  },
  {
    "path": "doc/source/analyzing/_static/axes.c",
    "chars": 529,
    "preview": "#include \"axes.h\"\n\nvoid calculate_axes(ParticleCollection *part,\n    double *ax1, double *ax2, double *ax3)\n{\n    int i;"
  },
  {
    "path": "doc/source/analyzing/_static/axes.h",
    "chars": 234,
    "preview": "typedef struct structParticleCollection {\n     long npart;\n     double *xpos;\n     double *ypos;\n     double *zpos;\n} Pa"
  },
  {
    "path": "doc/source/analyzing/_static/axes_calculator.pyx",
    "chars": 1072,
    "preview": "import numpy as np\ncimport numpy as np\n\n\ncdef extern from \"axes.h\":\n    ctypedef struct ParticleCollection:\n            "
  },
  {
    "path": "doc/source/analyzing/_static/axes_calculator_setup.txt",
    "chars": 599,
    "preview": "NAME = \"axes_calculator\"\nEXT_SOURCES = [\"axes.c\"]\nEXT_LIBRARIES = []\nEXT_LIBRARY_DIRS = []\nEXT_INCLUDE_DIRS = []\nDEFINES"
  },
  {
    "path": "doc/source/analyzing/astropy_integrations.rst",
    "chars": 2597,
    "preview": ".. _astropy-integrations:\n\nAstroPy Integrations\n====================\n\nyt enables a number of integrations with the Astro"
  },
  {
    "path": "doc/source/analyzing/domain_analysis/XrayEmissionFields.ipynb",
    "chars": 9231,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# X-ray Emission Fields\"\n   ]\n  },\n"
  },
  {
    "path": "doc/source/analyzing/domain_analysis/clump_finding.rst",
    "chars": 7750,
    "preview": ".. _clump_finding:\n\nClump Finding\n=============\n\nThe clump finder uses a contouring algorithm to identified topologicall"
  },
  {
    "path": "doc/source/analyzing/domain_analysis/cosmology_calculator.rst",
    "chars": 2927,
    "preview": ".. _cosmology-calculator:\n\nCosmology Calculator\n====================\n\nThe cosmology calculator can be used to calculate "
  },
  {
    "path": "doc/source/analyzing/domain_analysis/index.rst",
    "chars": 2233,
    "preview": ".. _domain-analysis:\n\nDomain-Specific Analysis\n========================\n\nyt powers a number modules that provide special"
  },
  {
    "path": "doc/source/analyzing/domain_analysis/xray_data_README.rst",
    "chars": 2201,
    "preview": ".. _xray_data_README:\n\nAuxiliary Data Files for use with yt's Photon Simulator\n========================================="
  },
  {
    "path": "doc/source/analyzing/fields.rst",
    "chars": 39656,
    "preview": ".. _fields:\n\nFields in yt\n============\n\nFields are spatially-dependent quantities associated with a parent dataset.\nExam"
  },
  {
    "path": "doc/source/analyzing/filtering.rst",
    "chars": 13063,
    "preview": ".. _filtering-data:\n\nFiltering your Dataset\n======================\n\nLarge datasets are oftentimes too overwhelming to de"
  },
  {
    "path": "doc/source/analyzing/generating_processed_data.rst",
    "chars": 14440,
    "preview": ".. _generating-processed-data:\n\nGenerating Processed Data\n=========================\n\nAlthough yt provides a number of bu"
  },
  {
    "path": "doc/source/analyzing/index.rst",
    "chars": 816,
    "preview": ".. _analyzing:\n\nGeneral Data Analysis\n=====================\n\nThis documentation describes much of the yt infrastructure "
  },
  {
    "path": "doc/source/analyzing/ionization_cube.py",
    "chars": 1461,
    "preview": "import time\n\nimport h5py\nimport numpy as np\n\nimport yt\nfrom yt.utilities.parallel_tools.parallel_analysis_interface impo"
  },
  {
    "path": "doc/source/analyzing/mesh_filter.ipynb",
    "chars": 7755,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Filtering Grid Data\"\n   ]\n  },\n  "
  },
  {
    "path": "doc/source/analyzing/objects.rst",
    "chars": 34924,
    "preview": ".. _Data-objects:\n\nData Objects\n============\n\nWhat are Data Objects in yt?\n----------------------------\n\nData objects (a"
  },
  {
    "path": "doc/source/analyzing/parallel_computation.rst",
    "chars": 29501,
    "preview": ".. _parallel-computation:\n\nParallel Computation With yt\n============================\n\nyt has been instrumented with the "
  },
  {
    "path": "doc/source/analyzing/particle_filter.ipynb",
    "chars": 5648,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Filtering Particle Data\\n\",\n    \""
  },
  {
    "path": "doc/source/analyzing/saving_data.rst",
    "chars": 7819,
    "preview": ".. _saving_data:\n\nSaving Reloadable Data\n======================\n\nMost of the data loaded into or generated with yt can b"
  },
  {
    "path": "doc/source/analyzing/time_series_analysis.rst",
    "chars": 7786,
    "preview": ".. _time-series-analysis:\n\nTime Series Analysis\n====================\n\nOften, one wants to analyze a continuous set of ou"
  },
  {
    "path": "doc/source/analyzing/units.rst",
    "chars": 13194,
    "preview": ".. _units:\n\nSymbolic Units\n==============\n\nThis section describes yt's symbolic unit capabilities. This is provided as\nq"
  },
  {
    "path": "doc/source/conf.py",
    "chars": 8780,
    "preview": "#\n# yt documentation build configuration file, created by\n# sphinx-quickstart on Tue Jan 11 09:46:53 2011.\n#\n# This file"
  },
  {
    "path": "doc/source/cookbook/amrkdtree_downsampling.py",
    "chars": 2614,
    "preview": "# Using AMRKDTree Homogenized Volumes to examine large datasets\n# at lower resolution.\n\n# In this example we will show h"
  },
  {
    "path": "doc/source/cookbook/annotate_timestamp_and_scale.py",
    "chars": 268,
    "preview": "import yt\n\nts = yt.load(\"enzo_tiny_cosmology/DD000?/DD000?\")\nfor ds in ts:\n    p = yt.ProjectionPlot(ds, \"z\", (\"gas\", \"d"
  },
  {
    "path": "doc/source/cookbook/annotations.py",
    "chars": 705,
    "preview": "import yt\n\nds = yt.load(\"enzo_tiny_cosmology/DD0046/DD0046\")\np = yt.ProjectionPlot(ds, \"z\", (\"gas\", \"density\"))\np.annota"
  },
  {
    "path": "doc/source/cookbook/average_value.py",
    "chars": 554,
    "preview": "import yt\n\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")  # load data\n\nfield = (\"gas\", \"temperature\")  # The fiel"
  },
  {
    "path": "doc/source/cookbook/calculating_information.rst",
    "chars": 3999,
    "preview": "Calculating Dataset Information\n-------------------------------\n\nThese recipes demonstrate methods of calculating quanti"
  },
  {
    "path": "doc/source/cookbook/camera_movement.py",
    "chars": 704,
    "preview": "import numpy as np\n\nimport yt\n\nds = yt.load(\"MOOSE_sample_data/out.e-s010\")\nsc = yt.create_scene(ds)\ncam = sc.camera\n\n# "
  },
  {
    "path": "doc/source/cookbook/changing_label_formats.py",
    "chars": 342,
    "preview": "import yt\n\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# Set the format of the ionozation_label to be `plus_mi"
  },
  {
    "path": "doc/source/cookbook/colormaps.py",
    "chars": 616,
    "preview": "import yt\n\n# Load the dataset\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# Create a projection and save it wi"
  },
  {
    "path": "doc/source/cookbook/complex_plots.rst",
    "chars": 16378,
    "preview": "A Few Complex Plots\n-------------------\n\nThe built-in plotting functionality covers the very simple use cases that are\nm"
  },
  {
    "path": "doc/source/cookbook/constructing_data_objects.rst",
    "chars": 1239,
    "preview": "Constructing Data Objects\n-------------------------\n\nThese recipes demonstrate a few uncommon methods of constructing da"
  },
  {
    "path": "doc/source/cookbook/contours_on_slice.py",
    "chars": 440,
    "preview": "import yt\n\n# first add density contours on a density slice\nds = yt.load(\"GasSloshing/sloshing_nomag2_hdf5_plt_cnt_0150\")"
  },
  {
    "path": "doc/source/cookbook/count.sh",
    "chars": 125,
    "preview": "for fn in *.py\ndo\n    COUNT=`cat *.rst | grep --count ${fn}`\n    if [ $COUNT -lt 1 ]\n    then\n        echo ${fn}\n    fi\n"
  },
  {
    "path": "doc/source/cookbook/custom_camera_volume_rendering.py",
    "chars": 654,
    "preview": "import yt\n\n# Load the dataset\nds = yt.load(\"Enzo_64/DD0043/data0043\")\n\n# Create a volume rendering\nsc = yt.create_scene("
  },
  {
    "path": "doc/source/cookbook/custom_colorbar_tickmarks.ipynb",
    "chars": 2813,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Custom Colorbar Tickmarks\"\n   ]\n "
  },
  {
    "path": "doc/source/cookbook/custom_transfer_function_volume_rendering.py",
    "chars": 670,
    "preview": "import numpy as np\n\nimport yt\n\n# Load the dataset\nds = yt.load(\"Enzo_64/DD0043/data0043\")\n\n# Create a volume rendering\ns"
  },
  {
    "path": "doc/source/cookbook/customized_phase_plot.py",
    "chars": 732,
    "preview": "import yt\nimport yt.units as u\n\nds = yt.load(\"HiresIsolatedGalaxy/DD0044/DD0044\")\n\ncenter = [0.53, 0.53, 0.53]\nnormal = "
  },
  {
    "path": "doc/source/cookbook/customized_profile_plot.py",
    "chars": 723,
    "preview": "import yt\nimport yt.units as u\n\nds = yt.load(\"HiresIsolatedGalaxy/DD0044/DD0044\")\n\ncenter = [0.53, 0.53, 0.53]\nnormal = "
  },
  {
    "path": "doc/source/cookbook/derived_field.py",
    "chars": 928,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# You can create a derived field by"
  },
  {
    "path": "doc/source/cookbook/downsampling_amr.py",
    "chars": 821,
    "preview": "import yt\n\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# The maximum refinement level of this dataset is 8\npri"
  },
  {
    "path": "doc/source/cookbook/extract_fixed_resolution_data.py",
    "chars": 1068,
    "preview": "# For this example we will use h5py to write to our output file.\nimport h5py\n\nimport yt\n\nds = yt.load(\"IsolatedGalaxy/ga"
  },
  {
    "path": "doc/source/cookbook/find_clumps.py",
    "chars": 2478,
    "preview": "import numpy as np\n\nimport yt\nfrom yt.data_objects.level_sets.api import Clump, find_clumps\n\nds = yt.load(\"IsolatedGalax"
  },
  {
    "path": "doc/source/cookbook/fits_radio_cubes.ipynb",
    "chars": 12670,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Analyzing FITS Radio Cubes\"\n   ]\n"
  },
  {
    "path": "doc/source/cookbook/fits_xray_images.ipynb",
    "chars": 13887,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# X-ray FITS Images\"\n   ]\n  },\n  {\n"
  },
  {
    "path": "doc/source/cookbook/geographic_xforms_and_projections.ipynb",
    "chars": 14988,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Geographic Transforms and Project"
  },
  {
    "path": "doc/source/cookbook/global_phase_plots.py",
    "chars": 402,
    "preview": "import yt\n\n# load the dataset\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# This is an object that describes t"
  },
  {
    "path": "doc/source/cookbook/hse_field.py",
    "chars": 1541,
    "preview": "import numpy as np\n\nimport yt\n\n# Open a dataset from when there's a lot of sloshing going on.\n\nds = yt.load(\"GasSloshing"
  },
  {
    "path": "doc/source/cookbook/image_background_colors.py",
    "chars": 1227,
    "preview": "import yt\n\n# This shows how to save ImageArray objects, such as those returned from\n# volume renderings, to pngs with va"
  },
  {
    "path": "doc/source/cookbook/image_resolution.py",
    "chars": 2641,
    "preview": "import numpy as np\n\nimport yt\n\n# Load the dataset.  We'll work with a some Gadget data to illustrate all\n# the different"
  },
  {
    "path": "doc/source/cookbook/index.rst",
    "chars": 1427,
    "preview": ".. _cookbook:\n\nThe Cookbook\n============\n\nyt provides a great deal of functionality to the user, but sometimes it can\nbe"
  },
  {
    "path": "doc/source/cookbook/matplotlib-animation.py",
    "chars": 697,
    "preview": "from matplotlib import rc_context\nfrom matplotlib.animation import FuncAnimation\n\nimport yt\n\nts = yt.load(\"GasSloshingLo"
  },
  {
    "path": "doc/source/cookbook/multi_plot_3x2_FRB.py",
    "chars": 2559,
    "preview": "import numpy as np\nfrom matplotlib.colors import LogNorm\n\nimport yt\nfrom yt.visualization.api import get_multi_plot\n\nfn "
  },
  {
    "path": "doc/source/cookbook/multi_plot_slice_and_proj.py",
    "chars": 2965,
    "preview": "import numpy as np\nfrom matplotlib.colors import LogNorm\n\nimport yt\nfrom yt.visualization.base_plot_types import get_mul"
  },
  {
    "path": "doc/source/cookbook/multi_width_image.py",
    "chars": 918,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# Create a slice plot for the datas"
  },
  {
    "path": "doc/source/cookbook/multiplot_2x2.py",
    "chars": 1521,
    "preview": "import matplotlib.pyplot as plt\nfrom mpl_toolkits.axes_grid1 import AxesGrid\n\nimport yt\n\nfn = \"IsolatedGalaxy/galaxy0030"
  },
  {
    "path": "doc/source/cookbook/multiplot_2x2_coordaxes_slice.py",
    "chars": 1796,
    "preview": "import matplotlib.pyplot as plt\nfrom mpl_toolkits.axes_grid1 import AxesGrid\n\nimport yt\n\nfn = \"IsolatedGalaxy/galaxy0030"
  },
  {
    "path": "doc/source/cookbook/multiplot_2x2_time_series.py",
    "chars": 1395,
    "preview": "import matplotlib.pyplot as plt\nfrom mpl_toolkits.axes_grid1 import AxesGrid\n\nimport yt\n\nfns = [\n    \"Enzo_64/DD0005/dat"
  },
  {
    "path": "doc/source/cookbook/multiplot_export_to_mpl.py",
    "chars": 509,
    "preview": "import yt\n\nds = yt.load_sample(\"IsolatedGalaxy\")\n\nfields = [\n    (\"gas\", \"density\"),\n    (\"gas\", \"velocity_x\"),\n    (\"ga"
  },
  {
    "path": "doc/source/cookbook/multiplot_phaseplot.py",
    "chars": 1450,
    "preview": "import matplotlib.pyplot as plt\nfrom mpl_toolkits.axes_grid1 import AxesGrid\n\nimport yt\n\nfig = plt.figure()\n\n# See http:"
  },
  {
    "path": "doc/source/cookbook/notebook_tutorial.rst",
    "chars": 1376,
    "preview": ".. _notebook-tutorial:\n\nNotebook Tutorial\n-----------------\n\nThe IPython notebook is a powerful system for literate codi"
  },
  {
    "path": "doc/source/cookbook/offaxis_projection.py",
    "chars": 1293,
    "preview": "import numpy as np\n\nimport yt\n\n# Load the dataset.\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# Choose a cent"
  },
  {
    "path": "doc/source/cookbook/offaxis_projection_colorbar.py",
    "chars": 1696,
    "preview": "import yt\n\nfn = \"IsolatedGalaxy/galaxy0030/galaxy0030\"  # dataset to load\n\nds = yt.load(fn)  # load data\n\n# Now we need "
  },
  {
    "path": "doc/source/cookbook/opaque_rendering.py",
    "chars": 2076,
    "preview": "import numpy as np\n\nimport yt\n\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# We start by building a default vo"
  },
  {
    "path": "doc/source/cookbook/overplot_grids.py",
    "chars": 455,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"Enzo_64/DD0043/data0043\")\n\n# Make a density projection.\np = yt.ProjectionPl"
  },
  {
    "path": "doc/source/cookbook/overplot_particles.py",
    "chars": 643,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"Enzo_64/DD0043/data0043\")\n\n# Make a density projection centered on the 'm'a"
  },
  {
    "path": "doc/source/cookbook/particle_filter.py",
    "chars": 2366,
    "preview": "import numpy as np\n\nimport yt\nfrom yt.data_objects.particle_filters import add_particle_filter\n\n\n# Define filter functio"
  },
  {
    "path": "doc/source/cookbook/particle_filter_sfr.py",
    "chars": 1071,
    "preview": "import numpy as np\nfrom matplotlib import pyplot as plt\n\nimport yt\nfrom yt.data_objects.particle_filters import add_part"
  },
  {
    "path": "doc/source/cookbook/particle_one_color_plot.py",
    "chars": 279,
    "preview": "import yt\n\n# load the dataset\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# create our plot\np = yt.ParticlePlo"
  },
  {
    "path": "doc/source/cookbook/particle_xvz_plot.py",
    "chars": 438,
    "preview": "import yt\n\n# load the dataset\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# create our plot\np = yt.ParticlePlo"
  },
  {
    "path": "doc/source/cookbook/particle_xy_plot.py",
    "chars": 380,
    "preview": "import yt\n\n# load the dataset\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# create our plot\np = yt.ParticlePlo"
  },
  {
    "path": "doc/source/cookbook/power_spectrum_example.py",
    "chars": 3012,
    "preview": "import matplotlib.pyplot as plt\nimport numpy as np\n\nimport yt\n\n\"\"\"\nMake a turbulent KE power spectrum.  Since we are str"
  },
  {
    "path": "doc/source/cookbook/profile_with_standard_deviation.py",
    "chars": 1098,
    "preview": "import matplotlib.pyplot as plt\n\nimport yt\n\n# Load the dataset.\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# "
  },
  {
    "path": "doc/source/cookbook/rad_velocity.py",
    "chars": 1292,
    "preview": "import matplotlib.pyplot as plt\n\nimport yt\n\nds = yt.load(\"GasSloshing/sloshing_nomag2_hdf5_plt_cnt_0150\")\n\n# Get the fir"
  },
  {
    "path": "doc/source/cookbook/radial_profile_styles.py",
    "chars": 1270,
    "preview": "import matplotlib.pyplot as plt\n\nimport yt\n\nds = yt.load(\"GasSloshing/sloshing_nomag2_hdf5_plt_cnt_0150\")\n\n# Get a spher"
  },
  {
    "path": "doc/source/cookbook/render_two_fields.py",
    "chars": 715,
    "preview": "import yt\nfrom yt.visualization.volume_rendering.api import Scene, create_volume_source\n\nfilePath = \"Sedov_3d/sedov_hdf5"
  },
  {
    "path": "doc/source/cookbook/render_two_fields_tf.py",
    "chars": 1077,
    "preview": "import numpy as np\n\nimport yt\nfrom yt.visualization.volume_rendering.api import Scene, create_volume_source\n\nds = yt.loa"
  },
  {
    "path": "doc/source/cookbook/rendering_with_box_and_grids.py",
    "chars": 584,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"Enzo_64/DD0043/data0043\")\nsc = yt.create_scene(ds, (\"gas\", \"density\"))\n\n# Y"
  },
  {
    "path": "doc/source/cookbook/show_hide_axes_colorbar.py",
    "chars": 319,
    "preview": "import yt\n\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\nslc = yt.SlicePlot(ds, \"x\", (\"gas\", \"density\"))\nslc.save"
  },
  {
    "path": "doc/source/cookbook/sigma_clip.py",
    "chars": 617,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"enzo_tiny_cosmology/RD0009/RD0009\")\n\n# Create a volume rendering, which wil"
  },
  {
    "path": "doc/source/cookbook/simple_1d_line_plot.py",
    "chars": 436,
    "preview": "import yt\n\n# Load the dataset\nds = yt.load(\"SecondOrderTris/RZ_p_no_parts_do_nothing_bcs_cone_out.e\", step=-1)\n\n# Create"
  },
  {
    "path": "doc/source/cookbook/simple_contour_in_slice.py",
    "chars": 937,
    "preview": "import yt\n\n# Load the data file.\nds = yt.load(\"Sedov_3d/sedov_hdf5_chk_0002\")\n\n# Make a traditional slice plot.\nsp = yt."
  },
  {
    "path": "doc/source/cookbook/simple_off_axis_projection.py",
    "chars": 579,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# Create a 15 kpc radius sphere, ce"
  },
  {
    "path": "doc/source/cookbook/simple_off_axis_slice.py",
    "chars": 548,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# Create a 15 kpc radius sphere, ce"
  },
  {
    "path": "doc/source/cookbook/simple_pdf.py",
    "chars": 568,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"GalaxyClusterMerger/fiducial_1to3_b0.273d_hdf5_plt_cnt_0175\")\n\n# Create a d"
  },
  {
    "path": "doc/source/cookbook/simple_phase.py",
    "chars": 701,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# Create a sphere of radius 100 kpc"
  },
  {
    "path": "doc/source/cookbook/simple_plots.rst",
    "chars": 9581,
    "preview": "Making Simple Plots\n-------------------\n\nOne of the easiest ways to interact with yt is by creating simple\nvisualization"
  },
  {
    "path": "doc/source/cookbook/simple_profile.py",
    "chars": 563,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# Create a 1D profile within a sphe"
  },
  {
    "path": "doc/source/cookbook/simple_projection.py",
    "chars": 342,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"GalaxyClusterMerger/fiducial_1to3_b0.273d_hdf5_plt_cnt_0175\")\n\n# Create pro"
  },
  {
    "path": "doc/source/cookbook/simple_projection_methods.py",
    "chars": 340,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"GalaxyClusterMerger/fiducial_1to3_b0.273d_hdf5_plt_cnt_0175\")\n\n# Create pro"
  },
  {
    "path": "doc/source/cookbook/simple_projection_stddev.py",
    "chars": 396,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"GalaxyClusterMerger/fiducial_1to3_b0.273d_hdf5_plt_cnt_0175\")\n\n# Create den"
  },
  {
    "path": "doc/source/cookbook/simple_projection_weighted.py",
    "chars": 321,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"GalaxyClusterMerger/fiducial_1to3_b0.273d_hdf5_plt_cnt_0175\")\n\n# Create den"
  },
  {
    "path": "doc/source/cookbook/simple_radial_profile.py",
    "chars": 588,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"IsolatedGalaxy/galaxy0030/galaxy0030\")\n\n# Create a sphere of radius 100 kpc"
  },
  {
    "path": "doc/source/cookbook/simple_slice.py",
    "chars": 354,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"GasSloshing/sloshing_nomag2_hdf5_plt_cnt_0150\")\n\n# Create gas density slice"
  },
  {
    "path": "doc/source/cookbook/simple_slice_matplotlib_example.py",
    "chars": 1059,
    "preview": "import numpy as np\n\nimport yt\n\n# Load the dataset.\nds = yt.load(\"GasSloshing/sloshing_nomag2_hdf5_plt_cnt_0150\")\n\n# Crea"
  },
  {
    "path": "doc/source/cookbook/simple_slice_with_multiple_fields.py",
    "chars": 308,
    "preview": "import yt\n\n# Load the dataset\nds = yt.load(\"GasSloshing/sloshing_nomag2_hdf5_plt_cnt_0150\")\n\n# Create gas density slices"
  },
  {
    "path": "doc/source/cookbook/simple_volume_rendering.py",
    "chars": 353,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"Enzo_64/DD0043/data0043\")\n\n# Create a volume rendering, which will determin"
  },
  {
    "path": "doc/source/cookbook/simulation_analysis.py",
    "chars": 1284,
    "preview": "import yt\n\nyt.enable_parallelism()\n\n# Enable parallelism in the script (assuming it was called with\n# `mpirun -np <n_pro"
  },
  {
    "path": "doc/source/cookbook/streamlines.py",
    "chars": 1250,
    "preview": "import matplotlib.pyplot as plt\nimport numpy as np\nfrom mpl_toolkits.mplot3d import Axes3D\n\nimport yt\nfrom yt.units impo"
  },
  {
    "path": "doc/source/cookbook/streamlines_isocontour.py",
    "chars": 2490,
    "preview": "import matplotlib.pyplot as plt\nimport numpy as np\nfrom mpl_toolkits.mplot3d import Axes3D\nfrom mpl_toolkits.mplot3d.art"
  },
  {
    "path": "doc/source/cookbook/sum_mass_in_sphere.py",
    "chars": 644,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"Enzo_64/DD0029/data0029\")\n\n# Create a 1 Mpc radius sphere, centered on the "
  },
  {
    "path": "doc/source/cookbook/surface_plot.py",
    "chars": 1506,
    "preview": "import matplotlib.pyplot as plt\nimport numpy as np\nfrom mpl_toolkits.mplot3d import Axes3D  # noqa: F401\nfrom mpl_toolki"
  },
  {
    "path": "doc/source/cookbook/tests/test_cookbook.py",
    "chars": 1204,
    "preview": "\"\"\"Module for cookbook testing\n\n\nThis test should be run from main yt directory.\n\nExample:\n\n      $ sed -e '/where/d' -i"
  },
  {
    "path": "doc/source/cookbook/thin_slice_projection.py",
    "chars": 1131,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"Enzo_64/DD0030/data0030\")\n\n# Make a projection that is the full width of th"
  },
  {
    "path": "doc/source/cookbook/time_series.py",
    "chars": 1700,
    "preview": "import matplotlib.pyplot as plt\nimport numpy as np\n\nimport yt\n\n# Enable parallelism in the script (assuming it was calle"
  },
  {
    "path": "doc/source/cookbook/time_series_profiles.py",
    "chars": 876,
    "preview": "import yt\n\n# Create a time-series object.\nsim = yt.load_simulation(\"enzo_tiny_cosmology/32Mpc_32.enzo\", \"Enzo\")\nsim.get_"
  },
  {
    "path": "doc/source/cookbook/tipsy_and_yt.ipynb",
    "chars": 5003,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Loading Tipsy Data\"\n   ]\n  },\n  {"
  },
  {
    "path": "doc/source/cookbook/various_lens.py",
    "chars": 4682,
    "preview": "import numpy as np\n\nimport yt\nfrom yt.visualization.volume_rendering.api import Scene, create_volume_source\n\nfield = (\"g"
  },
  {
    "path": "doc/source/cookbook/velocity_vectors_on_slice.py",
    "chars": 223,
    "preview": "import yt\n\n# Load the dataset.\nds = yt.load(\"GasSloshing/sloshing_nomag2_hdf5_plt_cnt_0150\")\n\np = yt.SlicePlot(ds, \"x\", "
  },
  {
    "path": "doc/source/cookbook/vol-annotated.py",
    "chars": 954,
    "preview": "import yt\n\nds = yt.load(\"Enzo_64/DD0043/data0043\")\n\nsc = yt.create_scene(ds, lens_type=\"perspective\")\n\nsource = sc[0]\n\ns"
  },
  {
    "path": "doc/source/cookbook/vol-lines.py",
    "chars": 469,
    "preview": "import numpy as np\n\nimport yt\nfrom yt.units import kpc\nfrom yt.visualization.volume_rendering.api import LineSource\n\nds "
  },
  {
    "path": "doc/source/cookbook/vol-points.py",
    "chars": 608,
    "preview": "import numpy as np\n\nimport yt\nfrom yt.units import kpc\nfrom yt.visualization.volume_rendering.api import PointSource\n\nds"
  },
  {
    "path": "doc/source/cookbook/yt_gadget_analysis.ipynb",
    "chars": 6315,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Loading Gadget data\"\n   ]\n  },\n  "
  },
  {
    "path": "doc/source/cookbook/yt_gadget_owls_analysis.ipynb",
    "chars": 5255,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Loading Gadget OWLS Data\"\n   ]\n  "
  },
  {
    "path": "doc/source/cookbook/zoomin_frames.py",
    "chars": 1245,
    "preview": "import numpy as np\n\nimport yt\n\n# load data\nfn = \"IsolatedGalaxy/galaxy0030/galaxy0030\"\nds = yt.load(fn)\n\n# This is the n"
  },
  {
    "path": "doc/source/developing/building_the_docs.rst",
    "chars": 9191,
    "preview": ".. _documentation:\n\nDocumentation\n=============\n\n.. _writing_documentation:\n\nHow to Write Documentation\n----------------"
  },
  {
    "path": "doc/source/developing/creating_datatypes.rst",
    "chars": 2636,
    "preview": ".. _creating-objects:\n\nCreating Data Objects\n=====================\n\nThe three-dimensional datatypes in yt follow a fairl"
  },
  {
    "path": "doc/source/developing/creating_derived_fields.rst",
    "chars": 19048,
    "preview": ".. _creating-derived-fields:\n\nCreating Derived Fields\n=======================\n\nOne of the more powerful means of extendi"
  },
  {
    "path": "doc/source/developing/creating_frontend.rst",
    "chars": 16543,
    "preview": ".. _creating_frontend:\n\nCreating A New Code Frontend\n============================\n\nyt is designed to support analysis an"
  },
  {
    "path": "doc/source/developing/debugdrive.rst",
    "chars": 4386,
    "preview": ".. _debug-drive:\n\nDebugging yt\n============\n\nThere are several different convenience functions that allow you to control"
  },
  {
    "path": "doc/source/developing/deprecating_features.rst",
    "chars": 4349,
    "preview": ".. how-to-deprecate::\n\nHow to deprecate a feature\n--------------------------\n\nSince the 4.0.0 release, deprecation happe"
  },
  {
    "path": "doc/source/developing/developing.rst",
    "chars": 39,
    "preview": ".. include:: ../../../CONTRIBUTING.rst\n"
  },
  {
    "path": "doc/source/developing/extensions.rst",
    "chars": 3217,
    "preview": ".. _extensions:\n\nExtension Packages\n==================\n\n.. note:: For some additional discussion, see `YTEP-0029\n       "
  },
  {
    "path": "doc/source/developing/external_analysis.rst",
    "chars": 15666,
    "preview": ".. _external-analysis-tools:\n\nUsing yt with External Analysis Tools\n=====================================\n\nyt can be use"
  },
  {
    "path": "doc/source/developing/index.rst",
    "chars": 930,
    "preview": "Developing in yt\n================\n\nyt is an open-source project with a community of contributing scientists.\nWhile you c"
  },
  {
    "path": "doc/source/developing/releasing.rst",
    "chars": 13700,
    "preview": "How to Do a Release\n-------------------\n\nPeriodically, the yt development community issues new releases. yt loosely foll"
  },
  {
    "path": "doc/source/developing/testing.rst",
    "chars": 25649,
    "preview": ".. _testing:\n\nTesting\n=======\n\nyt includes a testing suite that one can run on the code base to ensure that no\nbreaks in"
  },
  {
    "path": "doc/source/examining/Loading_Data_via_Functions.ipynb",
    "chars": 11052,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"id\": \"35cb9c22-04eb-476c-a7b6-afd27690be4d\",\n   \"metadata\": {},\n   \"so"
  },
  {
    "path": "doc/source/examining/Loading_Generic_Array_Data.ipynb",
    "chars": 27055,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Loading Generic Array Data\\n\",\n  "
  },
  {
    "path": "doc/source/examining/Loading_Generic_Particle_Data.ipynb",
    "chars": 7842,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Loading Generic Particle Data\\n\","
  },
  {
    "path": "doc/source/examining/Loading_Spherical_Data.ipynb",
    "chars": 7425,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Loading Spherical Data\\n\",\n    \"\\"
  },
  {
    "path": "doc/source/examining/index.rst",
    "chars": 758,
    "preview": ".. _examining-data:\n\nLoading and Examining Data\n==========================\n\nNominally, one should just be able to run ``"
  },
  {
    "path": "doc/source/examining/loading_data.rst",
    "chars": 127233,
    "preview": ".. _loading-data:\n\nLoading Data\n============\n\nThis section contains information on how to load data into yt, as well as\n"
  },
  {
    "path": "doc/source/examining/low_level_inspection.rst",
    "chars": 12298,
    "preview": ".. _low-level-data-inspection:\n\nLow-Level Data Inspection: Accessing Raw Data\n=========================================="
  },
  {
    "path": "doc/source/faq/index.rst",
    "chars": 16375,
    "preview": ".. _faq:\n\n\nFrequently Asked Questions\n==========================\n\n.. contents::\n   :depth: 2\n   :local:\n   :backlinks: n"
  },
  {
    "path": "doc/source/help/index.rst",
    "chars": 7715,
    "preview": ".. _asking-for-help:\n\nWhat to do if you run into problems\n===================================\n\nIf you run into problems "
  },
  {
    "path": "doc/source/index.rst",
    "chars": 5216,
    "preview": "yt Overview\n===========\n\nyt is a community-developed analysis and visualization toolkit for\nvolumetric data.  yt has bee"
  },
  {
    "path": "doc/source/installing.rst",
    "chars": 9069,
    "preview": ".. _installing-yt:\n\nGetting and Installing yt\n=========================\n\n.. contents::\n   :depth: 2\n   :local:\n   :backl"
  },
  {
    "path": "doc/source/intro/index.rst",
    "chars": 8136,
    "preview": "Introduction to yt\n==================\n\nHerein, we present a brief introduction to yt's capabilities and\ninfrastructure w"
  },
  {
    "path": "doc/source/quickstart/1)_Introduction.ipynb",
    "chars": 3083,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Welcome to the yt quickstart!\\n\","
  },
  {
    "path": "doc/source/quickstart/2)_Data_Inspection.ipynb",
    "chars": 11463,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Starting Out and Loading Data\\n\","
  },
  {
    "path": "doc/source/quickstart/3)_Simple_Visualization.ipynb",
    "chars": 8068,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Simple Visualizations of Data\\n\","
  },
  {
    "path": "doc/source/quickstart/4)_Data_Objects_and_Time_Series.ipynb",
    "chars": 12312,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Data Objects and Time Series Data"
  },
  {
    "path": "doc/source/quickstart/5)_Derived_Fields_and_Profiles.ipynb",
    "chars": 9849,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# Derived Fields and Profiles\\n\",\n "
  },
  {
    "path": "doc/source/quickstart/6)_Volume_Rendering.ipynb",
    "chars": 3588,
    "preview": "{\n \"cells\": [\n  {\n   \"cell_type\": \"markdown\",\n   \"metadata\": {},\n   \"source\": [\n    \"# A Brief Demo of Volume Rendering\\"
  },
  {
    "path": "doc/source/quickstart/index.rst",
    "chars": 2819,
    "preview": ".. _quickstart:\n\nyt Quickstart\n=============\n\nThe quickstart is a series of worked examples of how to use much of the\nfu"
  }
]

// ... and 1019 more files (download for full content)